# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cas_Cas6 PF01881.16 gi|41614797|ref|NP_963295.1| - 8.7e-12 45.8 20.4 4.3e-11 43.6 4.0 3.3 1 1 2 3 3 3 2 CRISPR associated protein Cas6 Peptidase_S24 PF00717.23 gi|41614797|ref|NP_963295.1| - 0.099 12.6 0.3 0.21 11.5 0.3 1.7 1 0 0 1 1 1 0 Peptidase S24-like Ribosomal_L33 PF00471.20 gi|41614797|ref|NP_963295.1| - 6.3 7.3 8.1 9.7 6.7 0.2 3.4 3 0 0 3 3 3 0 Ribosomal protein L33 DEAD PF00270.29 gi|41614798|ref|NP_963296.1| - 2.9e-32 111.8 0.2 2.2e-31 109.0 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|41614798|ref|NP_963296.1| - 9.7e-20 71.0 1.0 1.4e-18 67.2 0.1 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|41614798|ref|NP_963296.1| - 1.1e-13 51.6 1.5 1.4e-13 51.2 0.3 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|41614798|ref|NP_963296.1| - 0.0014 17.4 0.1 0.0027 16.5 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF2075 PF09848.9 gi|41614798|ref|NP_963296.1| - 0.0041 16.4 0.8 0.051 12.8 0.8 2.2 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 gi|41614798|ref|NP_963296.1| - 0.0046 16.1 0.0 0.023 13.8 0.0 1.9 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.6 gi|41614798|ref|NP_963296.1| - 0.0068 16.7 0.3 0.053 13.8 0.2 2.4 2 1 0 2 2 2 1 AAA domain MEDS PF14417.6 gi|41614798|ref|NP_963296.1| - 0.0073 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_19 PF13245.6 gi|41614798|ref|NP_963296.1| - 0.012 16.0 0.1 0.14 12.5 0.2 2.4 2 2 0 2 2 2 0 AAA domain AAA PF00004.29 gi|41614798|ref|NP_963296.1| - 0.017 15.6 1.1 0.57 10.6 0.7 2.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 gi|41614798|ref|NP_963296.1| - 0.091 12.2 0.0 0.2 11.1 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_11 PF13086.6 gi|41614798|ref|NP_963296.1| - 0.093 12.5 1.2 0.65 9.7 0.2 2.3 1 1 1 2 2 2 0 AAA domain Sulfatase PF00884.23 gi|41614798|ref|NP_963296.1| - 0.16 11.4 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Sulfatase Archease PF01951.16 gi|41614800|ref|NP_963298.1| - 3.6e-36 124.4 0.2 4e-36 124.3 0.2 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) NAGLU_C PF12972.7 gi|41614800|ref|NP_963298.1| - 0.043 13.3 0.2 0.11 12.0 0.0 1.6 1 1 1 2 2 2 0 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain RNA_Me_trans PF04252.13 gi|41614801|ref|NP_963299.1| - 6.2e-06 25.9 0.1 1.9e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 Predicted SAM-dependent RNA methyltransferase DNA_binding_1 PF01035.20 gi|41614802|ref|NP_963300.1| - 7.1e-17 61.3 0.0 9.7e-17 60.9 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain YdjM PF04307.14 gi|41614803|ref|NP_963301.1| - 0.69 9.2 4.4 1.5 8.1 4.4 1.8 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Radical_SAM PF04055.21 gi|41614804|ref|NP_963302.1| - 4.1e-25 89.1 0.1 1.2e-24 87.5 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|41614804|ref|NP_963302.1| - 3.8e-16 58.9 0.7 6.9e-16 58.1 0.2 1.7 2 0 0 2 2 2 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|41614804|ref|NP_963302.1| - 3.5e-05 23.7 0.3 9.8e-05 22.3 0.3 1.8 1 0 0 1 1 1 1 TRAM domain EF1_GNE PF00736.19 gi|41614804|ref|NP_963302.1| - 0.035 14.3 0.2 0.18 12.0 0.0 2.3 2 0 0 2 2 2 0 EF-1 guanine nucleotide exchange domain SVA PF05326.11 gi|41614804|ref|NP_963302.1| - 0.16 11.9 4.4 6.8 6.7 1.3 2.4 2 0 0 2 2 2 0 Seminal vesicle autoantigen (SVA) Fer4_12 PF13353.6 gi|41614804|ref|NP_963302.1| - 0.33 11.2 1.8 1.7 8.9 0.0 2.9 3 2 1 4 4 4 0 4Fe-4S single cluster domain LAGLIDADG_WhiA PF14527.6 gi|41614805|ref|NP_963303.1| - 0.1 12.7 0.5 0.6 10.2 0.1 1.9 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain POTRA_3 PF17287.2 gi|41614805|ref|NP_963303.1| - 0.16 11.4 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 POTRA domain GSP_synth PF03738.14 gi|41614806|ref|NP_963304.1| - 0.12 11.5 0.7 14 4.7 0.0 2.6 2 1 0 2 2 2 0 Glutathionylspermidine synthase preATP-grasp Desulfoferrodox PF01880.18 gi|41614807|ref|NP_963305.1| - 6.6e-28 97.2 1.4 7.5e-28 97.0 1.4 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin SoxY PF13501.6 gi|41614807|ref|NP_963305.1| - 0.038 14.2 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 Sulfur oxidation protein SoxY Glyco_trans_1_4 PF13692.6 gi|41614808|ref|NP_963306.1| - 2e-16 60.7 0.0 3.4e-16 59.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|41614808|ref|NP_963306.1| - 4.4e-12 46.3 0.0 1.4e-11 44.7 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|41614808|ref|NP_963306.1| - 2.6e-08 33.6 0.2 5.7e-08 32.5 0.2 1.6 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|41614808|ref|NP_963306.1| - 1.4e-05 25.4 0.0 2.9e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|41614808|ref|NP_963306.1| - 3e-05 24.5 0.0 7.7e-05 23.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|41614808|ref|NP_963306.1| - 0.00019 21.5 0.1 0.00048 20.2 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Oxidored_nitro PF00148.19 gi|41614808|ref|NP_963306.1| - 0.11 11.2 0.0 0.17 10.5 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Radical_SAM PF04055.21 gi|41614809|ref|NP_963307.1| - 5.8e-12 46.3 0.0 1.1e-11 45.4 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|41614809|ref|NP_963307.1| - 1.4e-07 31.7 0.4 4.4e-07 30.1 0.1 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|41614809|ref|NP_963307.1| - 3.5e-06 27.4 0.5 1.9e-05 25.1 0.0 2.4 3 0 0 3 3 3 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|41614809|ref|NP_963307.1| - 1.4e-05 25.3 1.1 6.7e-05 23.2 0.2 2.2 1 1 1 2 2 2 1 4Fe-4S single cluster domain ENTH PF01417.20 gi|41614809|ref|NP_963307.1| - 0.037 14.1 0.3 0.13 12.3 0.1 2.0 2 0 0 2 2 2 0 ENTH domain SWIRM PF04433.17 gi|41614809|ref|NP_963307.1| - 0.15 12.4 2.8 0.97 9.8 0.0 3.2 3 1 1 4 4 4 0 SWIRM domain SLAC1 PF03595.17 gi|41614810|ref|NP_963308.1| - 7.9e-52 176.5 40.8 9.1e-52 176.3 40.8 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Thy1 PF02511.15 gi|41614811|ref|NP_963309.1| - 1.7e-41 142.1 0.0 2.2e-41 141.8 0.0 1.1 1 0 0 1 1 1 1 Thymidylate synthase complementing protein PH_11 PF15413.6 gi|41614811|ref|NP_963309.1| - 0.07 13.6 0.1 0.36 11.3 0.1 2.2 1 1 1 2 2 2 0 Pleckstrin homology domain HSDR_N_2 PF13588.6 gi|41614811|ref|NP_963309.1| - 0.09 12.8 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) CRISPR_Cas2 PF09827.9 gi|41614812|ref|NP_963310.1| - 8e-18 64.4 2.0 1.1e-17 64.0 2.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas1 PF01867.16 gi|41614813|ref|NP_963311.1| - 6.3e-76 255.2 0.7 7.3e-76 255.0 0.7 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 BpuSI_N PF15516.6 gi|41614814|ref|NP_963312.1| - 0.013 15.4 1.1 0.061 13.2 0.1 2.1 2 0 0 2 2 2 0 BpuSI N-terminal domain ApoC-I PF04691.12 gi|41614814|ref|NP_963312.1| - 0.083 12.8 2.6 0.087 12.8 0.8 2.1 2 0 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) Annexin PF00191.20 gi|41614814|ref|NP_963312.1| - 0.61 10.2 3.6 4.1 7.6 0.4 2.7 2 0 0 2 2 2 0 Annexin DevR PF01905.16 gi|41614815|ref|NP_963313.1| - 1.3e-15 57.2 0.1 1.8e-13 50.2 0.1 2.2 1 1 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 DEAD PF00270.29 gi|41614817|ref|NP_963315.1| - 3.3e-12 46.5 0.1 6.3e-10 39.1 0.0 2.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|41614817|ref|NP_963315.1| - 8.3e-08 32.6 2.4 5e-07 30.1 0.5 3.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 gi|41614817|ref|NP_963315.1| - 9.6e-06 25.9 1.6 0.00012 22.3 0.2 3.1 2 1 0 2 2 2 1 AAA domain ResIII PF04851.15 gi|41614817|ref|NP_963315.1| - 8.7e-05 22.6 0.1 8.7e-05 22.6 0.1 2.7 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit HD_6 PF18019.1 gi|41614817|ref|NP_963315.1| - 0.00054 20.2 0.0 0.00092 19.4 0.0 1.3 1 0 0 1 1 1 1 HD domain AAA_19 PF13245.6 gi|41614817|ref|NP_963315.1| - 0.0048 17.2 0.0 0.012 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain HD PF01966.22 gi|41614817|ref|NP_963315.1| - 0.08 13.2 0.3 0.36 11.0 0.3 2.2 1 0 0 1 1 1 0 HD domain Cas_Cas4 PF01930.17 gi|41614818|ref|NP_963316.1| - 1.1e-51 175.2 5.4 1.2e-51 175.0 5.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|41614818|ref|NP_963316.1| - 0.0068 16.3 0.5 0.0081 16.1 0.5 1.3 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily ULD PF16534.5 gi|41614818|ref|NP_963316.1| - 0.018 15.1 0.1 0.026 14.6 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-like oligomerisation domain of SATB DUF1284 PF06935.11 gi|41614818|ref|NP_963316.1| - 0.037 14.5 0.1 0.078 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) Hjc PF01870.18 gi|41614818|ref|NP_963316.1| - 0.1 12.6 1.2 0.18 11.8 0.1 1.9 2 0 0 2 2 2 0 Archaeal holliday junction resolvase (hjc) Peptidase_M16_C PF05193.21 gi|41614819|ref|NP_963317.1| - 9.3e-15 55.1 0.5 1.9e-14 54.1 0.5 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 gi|41614819|ref|NP_963317.1| - 0.1 12.5 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) Pro_sub2 PF18513.1 gi|41614819|ref|NP_963317.1| - 5.8 7.2 7.7 0.82 9.9 0.1 2.9 3 1 1 4 4 4 0 Prodomain subtilisin 2 Pyr_redox_2 PF07992.14 gi|41614820|ref|NP_963318.1| - 7.8e-20 71.3 0.1 1.3e-11 44.3 0.0 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|41614820|ref|NP_963318.1| - 3.5e-05 24.3 0.3 0.33 11.5 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|41614820|ref|NP_963318.1| - 0.014 14.7 2.8 0.036 13.3 0.9 2.3 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|41614820|ref|NP_963318.1| - 0.016 13.9 0.1 1 8.0 0.1 2.7 2 1 1 3 3 3 0 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|41614820|ref|NP_963318.1| - 0.028 13.7 0.1 0.076 12.3 0.0 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|41614820|ref|NP_963318.1| - 0.039 13.5 0.2 1.2 8.6 0.1 2.6 2 1 1 3 3 3 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|41614820|ref|NP_963318.1| - 0.083 13.1 0.0 0.19 12.0 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|41614820|ref|NP_963318.1| - 0.11 11.6 0.1 0.2 10.7 0.0 1.4 2 0 0 2 2 2 0 FAD binding domain NTP_transferase PF00483.23 gi|41614821|ref|NP_963319.1| - 5.3e-37 127.7 0.0 6e-37 127.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|41614821|ref|NP_963319.1| - 1.5e-08 35.2 0.0 1.9e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|41614821|ref|NP_963319.1| - 0.0079 16.1 0.1 0.018 14.9 0.0 1.6 2 0 0 2 2 2 1 Cytidylyltransferase DUF1108 PF06531.11 gi|41614821|ref|NP_963319.1| - 0.048 14.0 8.2 1.1 9.6 1.9 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1108) Peptidase_M28 PF04389.17 gi|41614823|ref|NP_963321.1| - 0.019 14.7 0.2 3.8 7.1 0.0 2.4 1 1 1 2 2 2 0 Peptidase family M28 Glutaredoxin PF00462.24 gi|41614825|ref|NP_963323.1| - 2.3e-05 24.5 0.1 5e-05 23.4 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 gi|41614825|ref|NP_963323.1| - 0.00024 21.5 0.3 0.00041 20.8 0.3 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain PS_pyruv_trans PF04230.13 gi|41614825|ref|NP_963323.1| - 0.041 13.8 0.3 0.057 13.3 0.3 1.1 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF2933 PF11666.8 gi|41614825|ref|NP_963323.1| - 0.069 13.2 1.1 0.13 12.4 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2933) KH_1 PF00013.29 gi|41614827|ref|NP_963325.1| - 0.0077 16.0 1.0 0.018 14.9 1.0 1.6 1 0 0 1 1 1 1 KH domain AAA-ATPase_like PF09820.9 gi|41614827|ref|NP_963325.1| - 0.0082 15.6 0.7 0.011 15.2 0.7 1.1 1 0 0 1 1 1 1 Predicted AAA-ATPase FliS PF02561.14 gi|41614827|ref|NP_963325.1| - 0.062 13.6 0.7 0.11 12.7 0.7 1.6 1 0 0 1 1 1 0 Flagellar protein FliS Orthopox_F6 PF06601.12 gi|41614828|ref|NP_963326.1| - 0.28 11.4 7.9 4.1 7.6 0.1 3.5 3 0 0 3 3 3 0 Orthopoxvirus F6 protein BatD PF13584.6 gi|41614829|ref|NP_963327.1| - 9.5e-06 24.7 1.4 1.8e-05 23.8 1.4 1.4 1 0 0 1 1 1 1 Oxygen tolerance Big_3_5 PF16640.5 gi|41614829|ref|NP_963327.1| - 0.0008 19.5 2.8 0.0008 19.5 2.8 2.7 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 3) A2M PF00207.22 gi|41614829|ref|NP_963327.1| - 0.056 13.3 0.1 11 6.0 0.0 2.8 2 0 0 2 2 2 0 Alpha-2-macroglobulin family PA14 PF07691.12 gi|41614829|ref|NP_963327.1| - 0.091 12.6 2.5 0.18 11.6 0.6 2.3 2 1 0 2 2 2 0 PA14 domain DUF11 PF01345.18 gi|41614829|ref|NP_963327.1| - 2.1 8.7 7.4 1.3 9.4 1.7 3.1 2 1 0 2 2 2 0 Domain of unknown function DUF11 DUF4402 PF14352.6 gi|41614829|ref|NP_963327.1| - 4.2 8.0 11.2 0.31 11.7 0.3 3.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4402) PH_BEACH PF14844.6 gi|41614830|ref|NP_963328.1| - 0.19 11.8 4.5 1.5 9.0 0.8 2.3 2 0 0 2 2 2 0 PH domain associated with Beige/BEACH DUF2911 PF11138.8 gi|41614830|ref|NP_963328.1| - 0.22 11.4 4.5 0.23 11.3 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2911) DUF1041 PF06292.17 gi|41614830|ref|NP_963328.1| - 0.26 11.7 4.1 0.88 10.0 4.0 1.9 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1041) IL17R_fnIII_D2 PF16578.5 gi|41614831|ref|NP_963329.1| - 0.008 16.7 0.2 0.37 11.3 0.0 2.9 3 0 0 3 3 3 1 Interleukin 17 receptor D Invasin_D3 PF09134.10 gi|41614831|ref|NP_963329.1| - 0.15 12.4 5.0 4.4 7.7 0.0 4.4 4 3 0 4 4 4 0 Invasin, domain 3 DUF4467 PF14729.6 gi|41614831|ref|NP_963329.1| - 1.6 9.1 7.7 0.31 11.4 1.2 2.8 2 1 0 2 2 2 0 Domain of unknown function with cystatin-like fold (DUF4467) SPRY PF00622.28 gi|41614832|ref|NP_963330.1| - 0.026 14.6 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 SPRY domain McyA_C PF12593.8 gi|41614832|ref|NP_963330.1| - 0.063 13.1 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Microcystin synthetase C terminal ACP PF06857.11 gi|41614832|ref|NP_963330.1| - 0.15 12.4 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Malonate decarboxylase delta subunit (MdcD) Ribosomal_L37ae PF01780.19 gi|41614833|ref|NP_963331.1| - 1.3e-26 92.5 3.5 1.4e-26 92.3 3.5 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn-ribbon_8 PF09723.10 gi|41614833|ref|NP_963331.1| - 0.00018 21.5 1.8 0.04 14.0 0.3 2.2 2 0 0 2 2 2 2 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|41614833|ref|NP_963331.1| - 0.00047 20.1 5.3 0.00047 20.1 5.3 1.5 2 0 0 2 2 1 1 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|41614833|ref|NP_963331.1| - 0.0013 19.0 0.6 0.0019 18.5 0.6 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|41614833|ref|NP_963331.1| - 0.0037 16.7 0.4 0.0054 16.2 0.4 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zf-H2C2_2 PF13465.6 gi|41614833|ref|NP_963331.1| - 0.006 17.0 6.8 0.89 10.1 0.2 2.7 3 0 0 3 3 3 2 Zinc-finger double domain Rep_fac-A_C PF08646.10 gi|41614833|ref|NP_963331.1| - 0.0092 15.7 1.1 0.011 15.5 1.1 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain Endonuclease_7 PF02945.15 gi|41614833|ref|NP_963331.1| - 0.026 14.5 0.1 2.1 8.4 0.0 2.0 1 1 1 2 2 2 0 Recombination endonuclease VII zf-Sec23_Sec24 PF04810.15 gi|41614833|ref|NP_963331.1| - 0.026 14.6 1.3 0.32 11.1 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger C1_2 PF03107.16 gi|41614833|ref|NP_963331.1| - 0.039 14.3 0.7 0.061 13.6 0.7 1.3 1 0 0 1 1 1 0 C1 domain DZR PF12773.7 gi|41614833|ref|NP_963331.1| - 0.045 13.8 0.6 0.069 13.2 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-3CxxC_2 PF17180.4 gi|41614833|ref|NP_963331.1| - 0.07 13.9 2.2 0.15 12.8 0.5 2.0 2 0 0 2 2 2 0 Zinc-binding domain DUF35_N PF12172.8 gi|41614833|ref|NP_963331.1| - 0.075 12.9 3.1 3.8 7.5 0.2 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_ligase_ZBD PF03119.16 gi|41614833|ref|NP_963331.1| - 0.15 12.1 1.2 0.29 11.2 1.2 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Elf1 PF05129.13 gi|41614833|ref|NP_963331.1| - 0.18 11.9 3.7 0.37 10.9 3.7 1.6 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C2H2_4 PF13894.6 gi|41614833|ref|NP_963331.1| - 0.18 12.7 4.0 1.5 9.9 0.4 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger Zn_ribbon_SprT PF17283.2 gi|41614833|ref|NP_963331.1| - 0.28 11.1 7.4 2.2 8.3 5.8 2.2 1 1 1 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2 PF00096.26 gi|41614833|ref|NP_963331.1| - 0.3 11.6 4.6 0.35 11.4 0.9 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zinc_ribbon_10 PF10058.9 gi|41614833|ref|NP_963331.1| - 1.6 8.5 4.8 13 5.6 4.8 2.0 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein TFIIS_C PF01096.18 gi|41614833|ref|NP_963331.1| - 1.8 8.5 6.2 19 5.2 6.2 2.1 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) LSM PF01423.22 gi|41614834|ref|NP_963332.1| - 7e-14 51.3 0.1 8.9e-14 50.9 0.1 1.2 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|41614834|ref|NP_963332.1| - 1e-05 25.6 0.0 1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain Gemin7 PF11095.8 gi|41614834|ref|NP_963332.1| - 0.0069 16.3 0.0 0.0071 16.2 0.0 1.2 1 0 0 1 1 1 1 Gem-associated protein 7 (Gemin7) Hfq PF17209.3 gi|41614834|ref|NP_963332.1| - 0.054 13.2 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 Hfq protein TBP PF00352.21 gi|41614835|ref|NP_963333.1| - 1.7e-37 127.3 0.0 3.4e-19 68.6 0.0 2.1 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF1107 PF06526.12 gi|41614835|ref|NP_963333.1| - 0.037 13.9 0.0 0.61 10.0 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) ZT_dimer PF16916.5 gi|41614835|ref|NP_963333.1| - 0.061 13.5 0.1 0.25 11.5 0.0 2.0 2 0 0 2 2 2 0 Dimerisation domain of Zinc Transporter AMP-binding_C_2 PF14535.6 gi|41614836|ref|NP_963334.1| - 0.06 13.7 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain PAP2 PF01569.21 gi|41614837|ref|NP_963335.1| - 0.0035 17.1 5.9 0.0035 17.1 5.9 3.7 3 1 1 4 4 4 1 PAP2 superfamily DUF656 PF04920.12 gi|41614837|ref|NP_963335.1| - 0.045 13.7 0.2 0.085 12.8 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF656) Peptidase_M32 PF02074.15 gi|41614838|ref|NP_963336.1| - 2.6e-159 531.1 7.6 3e-159 530.9 7.6 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase SKI PF01202.22 gi|41614838|ref|NP_963336.1| - 0.1 12.7 0.0 0.28 11.3 0.0 1.8 1 0 0 1 1 1 0 Shikimate kinase Csm2_III-A PF03750.13 gi|41614838|ref|NP_963336.1| - 0.11 13.3 6.9 0.26 12.1 2.7 2.6 2 0 0 2 2 2 0 Csm2 Type III-A PRD PF00874.20 gi|41614838|ref|NP_963336.1| - 0.59 10.5 4.9 3.4 8.0 0.1 3.5 3 0 0 3 3 3 0 PRD domain zf-RING_7 PF02591.15 gi|41614839|ref|NP_963337.1| - 5.1e-05 23.4 1.5 0.048 13.9 0.1 2.2 2 0 0 2 2 2 2 C4-type zinc ribbon domain Ribosomal_S26e PF01283.19 gi|41614839|ref|NP_963337.1| - 0.0041 17.5 2.5 0.011 16.2 2.5 1.7 1 1 0 1 1 1 1 Ribosomal protein S26e DUF3268 PF11672.8 gi|41614839|ref|NP_963337.1| - 0.0056 17.0 2.8 0.33 11.3 2.8 2.1 1 1 0 1 1 1 1 zinc-finger-containing domain DrsE PF02635.15 gi|41614839|ref|NP_963337.1| - 0.013 15.9 0.2 0.018 15.4 0.0 1.5 2 0 0 2 2 2 0 DsrE/DsrF-like family Rad50_zn_hook PF04423.14 gi|41614839|ref|NP_963337.1| - 0.025 14.4 0.2 0.33 10.8 0.0 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif E6 PF00518.17 gi|41614839|ref|NP_963337.1| - 0.028 14.9 0.5 0.57 10.6 0.0 2.0 1 1 1 2 2 2 0 Early Protein (E6) DZR PF12773.7 gi|41614839|ref|NP_963337.1| - 0.029 14.4 0.0 0.051 13.6 0.0 1.4 1 1 0 1 1 1 0 Double zinc ribbon Ribosomal_S27e PF01667.17 gi|41614839|ref|NP_963337.1| - 0.031 14.0 0.3 2.4 8.0 0.0 2.2 2 0 0 2 2 2 0 Ribosomal protein S27 Mu-like_Com PF10122.9 gi|41614839|ref|NP_963337.1| - 0.06 12.8 0.2 0.21 11.1 0.0 1.8 2 0 0 2 2 2 0 Mu-like prophage protein Com Cas_CXXC_CXXC PF09706.10 gi|41614839|ref|NP_963337.1| - 0.066 13.5 0.3 0.1 12.8 0.3 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) PyrI_C PF02748.15 gi|41614839|ref|NP_963337.1| - 0.072 13.0 1.2 0.3 11.0 0.2 2.0 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2HC_2 PF13913.6 gi|41614839|ref|NP_963337.1| - 0.13 12.2 5.4 0.23 11.4 0.8 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 gi|41614839|ref|NP_963337.1| - 8.3 7.0 7.4 6.6 7.3 1.2 2.9 2 1 1 3 3 3 0 Zinc-finger double domain RIO1 PF01163.22 gi|41614840|ref|NP_963338.1| - 8.9e-08 31.9 0.3 1.8e-07 31.0 0.3 1.5 1 1 0 1 1 1 1 RIO1 family APH PF01636.23 gi|41614840|ref|NP_963338.1| - 1.3e-07 31.9 0.0 4.2e-06 26.9 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.25 gi|41614840|ref|NP_963338.1| - 5.2e-07 29.3 1.5 8.1e-07 28.7 1.5 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|41614840|ref|NP_963338.1| - 0.00013 21.4 0.0 0.00016 21.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase WaaY PF06176.11 gi|41614840|ref|NP_963338.1| - 0.00048 19.8 0.4 0.00068 19.3 0.4 1.4 1 1 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Kdo PF06293.14 gi|41614840|ref|NP_963338.1| - 0.0011 18.4 0.9 0.0032 16.8 0.2 1.9 1 1 1 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family TerY_C PF15616.6 gi|41614840|ref|NP_963338.1| - 0.13 12.4 0.6 0.26 11.4 0.6 1.5 1 1 0 1 1 1 0 TerY-C metal binding domain Topoisom_bac PF01131.20 gi|41614841|ref|NP_963339.1| - 3.7e-66 223.8 0.0 5.2e-66 223.4 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|41614841|ref|NP_963339.1| - 1.4e-13 51.0 0.2 3.8e-13 49.5 0.0 1.8 2 0 0 2 2 2 1 Toprim domain Toprim_4 PF13662.6 gi|41614841|ref|NP_963339.1| - 0.15 12.6 0.0 0.35 11.4 0.0 1.6 1 0 0 1 1 1 0 Toprim domain Il2rg PF15874.5 gi|41614842|ref|NP_963340.1| - 0.026 14.8 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Putative Interleukin 2 receptor, gamma chain ThiF PF00899.21 gi|41614843|ref|NP_963341.1| - 2.2e-12 46.8 0.0 6.6e-11 42.0 0.0 2.0 1 1 0 1 1 1 1 ThiF family NTP_transf_2 PF01909.23 gi|41614845|ref|NP_963343.1| - 5.5e-07 29.8 0.2 5.5e-07 29.8 0.2 3.5 3 2 0 3 3 3 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|41614845|ref|NP_963343.1| - 3.7e-05 23.7 0.0 3.7e-05 23.7 0.0 3.3 4 1 1 5 5 5 1 Polymerase beta, Nucleotidyltransferase DED PF01335.21 gi|41614845|ref|NP_963343.1| - 0.06 13.7 1.1 0.22 11.8 1.1 2.0 1 0 0 1 1 1 0 Death effector domain DUF294 PF03445.13 gi|41614845|ref|NP_963343.1| - 0.084 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 PI3K_p85B PF02192.16 gi|41614845|ref|NP_963343.1| - 0.13 12.0 1.2 0.49 10.2 0.1 2.5 2 0 0 2 2 2 0 PI3-kinase family, p85-binding domain Radical_SAM PF04055.21 gi|41614846|ref|NP_963344.1| - 7.6e-10 39.4 0.0 9.7e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily FAD_binding_6 PF00970.24 gi|41614847|ref|NP_963345.1| - 3.3e-15 56.2 0.0 5.2e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|41614847|ref|NP_963345.1| - 7.1e-07 29.9 0.0 1.5e-06 28.8 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_8 PF08022.12 gi|41614847|ref|NP_963345.1| - 0.0063 16.6 0.3 0.014 15.4 0.1 1.7 2 0 0 2 2 2 1 FAD-binding domain NAD_binding_6 PF08030.12 gi|41614847|ref|NP_963345.1| - 0.082 13.0 0.0 0.46 10.6 0.0 1.9 1 1 0 2 2 2 0 Ferric reductase NAD binding domain eRF1_2 PF03464.15 gi|41614848|ref|NP_963346.1| - 3e-36 124.7 0.0 5.5e-36 123.8 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 baeRF_family10 PF18854.1 gi|41614848|ref|NP_963346.1| - 2.7e-16 60.1 0.0 5e-16 59.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 gi|41614848|ref|NP_963346.1| - 1.3e-13 51.4 0.0 2.4e-13 50.5 0.0 1.5 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_3 PF03465.15 gi|41614848|ref|NP_963346.1| - 3.3e-09 37.2 1.7 1.3e-07 32.1 0.7 3.1 2 1 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|41614848|ref|NP_963346.1| - 4.4e-06 26.7 0.0 7.4e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 Ribosomal_L7Ae PF01248.26 gi|41614848|ref|NP_963346.1| - 0.0076 16.0 0.1 0.027 14.2 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SYCP2_ARLD PF18581.1 gi|41614848|ref|NP_963346.1| - 0.13 12.2 0.4 0.27 11.2 0.4 1.5 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain Cas_DxTHG PF09455.10 gi|41614848|ref|NP_963346.1| - 0.16 11.5 4.1 0.18 11.3 0.4 2.4 1 1 0 2 2 2 0 CRISPR-associated (Cas) DxTHG family tRNA_U5-meth_tr PF05958.11 gi|41614849|ref|NP_963347.1| - 6e-26 91.3 4.2 1.2e-13 50.9 0.1 2.5 2 1 0 2 2 2 2 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 gi|41614849|ref|NP_963347.1| - 3.4e-07 30.0 0.1 5.6e-07 29.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|41614849|ref|NP_963347.1| - 9.3e-07 28.7 0.0 2.5e-06 27.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|41614849|ref|NP_963347.1| - 2e-06 27.7 2.2 2.5e-06 27.4 1.0 1.7 2 0 0 2 2 2 1 Met-10+ like-protein DOT1 PF08123.13 gi|41614849|ref|NP_963347.1| - 1.5e-05 24.6 0.0 3.5e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_25 PF13649.6 gi|41614849|ref|NP_963347.1| - 1.9e-05 25.3 0.0 4.1e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|41614849|ref|NP_963347.1| - 0.00028 20.4 0.4 0.00042 19.8 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 gi|41614849|ref|NP_963347.1| - 0.00037 20.1 0.0 0.00082 19.0 0.0 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|41614849|ref|NP_963347.1| - 0.00044 19.4 0.1 0.00077 18.6 0.1 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase N6_N4_Mtase PF01555.18 gi|41614849|ref|NP_963347.1| - 0.00081 19.2 0.3 0.0019 18.0 0.2 1.8 1 1 0 1 1 1 1 DNA methylase Methyltransf_11 PF08241.12 gi|41614849|ref|NP_963347.1| - 0.0035 18.0 0.0 0.008 16.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|41614849|ref|NP_963347.1| - 0.013 15.2 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 N6_Mtase PF02384.16 gi|41614849|ref|NP_963347.1| - 0.014 14.7 0.3 0.03 13.6 0.0 1.6 2 0 0 2 2 2 0 N-6 DNA Methylase TRM PF02005.16 gi|41614849|ref|NP_963347.1| - 0.022 14.0 0.1 0.036 13.2 0.1 1.3 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_23 PF13489.6 gi|41614849|ref|NP_963347.1| - 0.023 14.5 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain SHD1 PF03983.12 gi|41614849|ref|NP_963347.1| - 0.029 14.2 0.0 0.067 13.0 0.0 1.5 1 0 0 1 1 1 0 SLA1 homology domain 1, SHD1 PCMT PF01135.19 gi|41614849|ref|NP_963347.1| - 0.035 13.9 0.1 0.057 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PsiE PF06146.12 gi|41614850|ref|NP_963348.1| - 7.5e-14 51.9 5.1 7.5e-14 51.9 5.1 2.1 2 0 0 2 2 2 1 Phosphate-starvation-inducible E tRNA-synt_1e PF01406.19 gi|41614851|ref|NP_963349.1| - 9.7e-111 369.9 0.8 1.5e-110 369.3 0.8 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|41614851|ref|NP_963349.1| - 5.2e-15 55.1 1.7 8.8e-08 31.3 0.1 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|41614851|ref|NP_963349.1| - 6.2e-10 38.0 0.1 5.1e-09 34.9 0.0 2.3 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|41614851|ref|NP_963349.1| - 1.9e-09 36.9 0.2 2.4e-06 26.7 0.2 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) DALR_2 PF09190.11 gi|41614851|ref|NP_963349.1| - 0.0011 19.4 0.3 0.0035 17.8 0.1 2.0 2 0 0 2 2 2 1 DALR domain DUF758 PF05527.11 gi|41614851|ref|NP_963349.1| - 0.0041 17.1 0.6 0.018 15.0 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF758) TF_AP-2 PF03299.14 gi|41614851|ref|NP_963349.1| - 0.17 11.8 0.7 1.1 9.2 0.2 2.1 2 0 0 2 2 2 0 Transcription factor AP-2 AAA_16 PF13191.6 gi|41614852|ref|NP_963350.1| - 1.1e-08 35.7 0.1 5e-06 27.0 0.0 2.5 2 1 1 3 3 2 1 AAA ATPase domain AAA PF00004.29 gi|41614852|ref|NP_963350.1| - 2.1e-08 34.7 0.0 4.6e-08 33.6 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cdc6_C PF09079.11 gi|41614852|ref|NP_963350.1| - 2.7e-07 30.4 0.0 6.8e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|41614852|ref|NP_963350.1| - 2.8e-06 27.7 0.0 6.5e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|41614852|ref|NP_963350.1| - 0.00093 19.5 0.6 0.0022 18.3 0.4 1.7 1 1 0 1 1 1 1 AAA C-terminal domain AAA_24 PF13479.6 gi|41614852|ref|NP_963350.1| - 0.0029 17.4 0.2 0.0055 16.5 0.2 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|41614852|ref|NP_963350.1| - 0.0058 15.9 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_5 PF07728.14 gi|41614852|ref|NP_963350.1| - 0.006 16.6 0.0 0.016 15.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|41614852|ref|NP_963350.1| - 0.007 16.1 0.0 0.021 14.5 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 interaction domain TIP49_C PF17856.1 gi|41614852|ref|NP_963350.1| - 0.0082 16.3 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_7 PF12775.7 gi|41614852|ref|NP_963350.1| - 0.0084 15.6 0.0 0.018 14.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region Torsin PF06309.11 gi|41614852|ref|NP_963350.1| - 0.014 15.5 0.0 0.03 14.4 0.0 1.5 1 0 0 1 1 1 0 Torsin PIF1 PF05970.14 gi|41614852|ref|NP_963350.1| - 0.018 14.2 0.1 0.032 13.4 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase Kinesin PF00225.23 gi|41614852|ref|NP_963350.1| - 0.026 13.4 0.0 0.044 12.7 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain Sigma54_activ_2 PF14532.6 gi|41614852|ref|NP_963350.1| - 0.028 14.5 0.0 0.25 11.5 0.0 2.4 2 1 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|41614852|ref|NP_963350.1| - 0.029 14.8 0.4 0.072 13.5 0.4 1.8 1 1 0 1 1 1 0 RNA helicase Microtub_bd PF16796.5 gi|41614852|ref|NP_963350.1| - 0.067 13.1 0.0 0.25 11.3 0.0 1.9 2 0 0 2 2 2 0 Microtubule binding ResIII PF04851.15 gi|41614852|ref|NP_963350.1| - 0.073 13.1 1.3 1.7 8.6 0.0 2.8 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|41614852|ref|NP_963350.1| - 0.076 12.8 0.3 2.6 7.8 0.1 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|41614852|ref|NP_963350.1| - 0.077 12.2 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 gi|41614852|ref|NP_963350.1| - 0.088 12.1 0.7 0.39 10.0 0.1 2.0 2 0 0 2 2 2 0 KaiC AAA_18 PF13238.6 gi|41614852|ref|NP_963350.1| - 0.12 12.9 0.0 0.23 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|41614852|ref|NP_963350.1| - 0.15 11.0 0.0 0.61 8.9 0.0 1.8 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 gi|41614852|ref|NP_963350.1| - 0.26 10.4 2.8 1.9 7.6 2.8 2.0 1 1 0 1 1 1 0 NB-ARC domain ATPase_2 PF01637.18 gi|41614852|ref|NP_963350.1| - 0.29 11.0 12.2 0.18 11.7 0.3 3.0 2 2 1 3 3 3 0 ATPase domain predominantly from Archaea DUF916 PF06030.12 gi|41614853|ref|NP_963351.1| - 0.058 13.5 4.7 0.79 9.8 3.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF916) Tli4_N PF18443.1 gi|41614853|ref|NP_963351.1| - 0.071 13.5 0.1 0.094 13.1 0.1 1.3 1 0 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain Ribosom_S12_S23 PF00164.25 gi|41614854|ref|NP_963352.1| - 6.8e-39 132.0 0.7 8.5e-39 131.7 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 T2SSE PF00437.20 gi|41614855|ref|NP_963353.1| - 4.3e-13 48.9 0.4 2.8e-12 46.3 0.2 2.2 3 0 0 3 3 3 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|41614855|ref|NP_963353.1| - 2e-05 24.3 0.2 2e-05 24.3 0.2 3.2 3 0 0 3 3 3 1 KH domain PIN_4 PF13638.6 gi|41614855|ref|NP_963353.1| - 2.8e-05 24.4 0.3 6.8e-05 23.2 0.3 1.6 1 0 0 1 1 1 1 PIN domain KH_2 PF07650.17 gi|41614855|ref|NP_963353.1| - 0.00079 19.2 2.1 0.00079 19.2 2.1 2.7 2 0 0 2 2 1 1 KH domain AAA_16 PF13191.6 gi|41614855|ref|NP_963353.1| - 0.0011 19.4 0.0 0.0027 18.1 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|41614855|ref|NP_963353.1| - 0.0022 18.5 0.0 0.0078 16.8 0.0 2.0 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|41614855|ref|NP_963353.1| - 0.0033 17.2 0.0 0.0063 16.3 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_5 PF07728.14 gi|41614855|ref|NP_963353.1| - 0.004 17.2 0.0 0.0084 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|41614855|ref|NP_963353.1| - 0.0043 16.6 0.0 0.015 14.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.6 gi|41614855|ref|NP_963353.1| - 0.0061 16.7 0.1 0.073 13.2 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|41614855|ref|NP_963353.1| - 0.0064 16.2 0.1 0.034 13.9 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DnaB_C PF03796.15 gi|41614855|ref|NP_963353.1| - 0.008 15.5 0.8 0.038 13.3 0.0 2.3 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_22 PF13401.6 gi|41614855|ref|NP_963353.1| - 0.01 16.1 0.1 0.089 13.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|41614855|ref|NP_963353.1| - 0.013 15.9 0.0 0.042 14.3 0.0 2.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|41614855|ref|NP_963353.1| - 0.014 15.5 0.0 0.12 12.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|41614855|ref|NP_963353.1| - 0.018 15.0 0.1 0.038 13.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 gi|41614855|ref|NP_963353.1| - 0.019 15.0 1.2 0.068 13.2 0.0 2.4 3 0 0 3 3 2 0 AAA domain Mg_chelatase PF01078.21 gi|41614855|ref|NP_963353.1| - 0.026 13.9 0.0 0.054 12.9 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|41614855|ref|NP_963353.1| - 0.033 13.9 0.0 0.1 12.3 0.0 1.9 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 gi|41614855|ref|NP_963353.1| - 0.033 13.9 0.1 0.15 11.7 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase AAA_28 PF13521.6 gi|41614855|ref|NP_963353.1| - 0.036 14.3 0.3 0.16 12.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|41614855|ref|NP_963353.1| - 0.04 13.4 0.0 0.094 12.2 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein FtsK_SpoIIIE PF01580.18 gi|41614855|ref|NP_963353.1| - 0.05 13.0 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family TsaE PF02367.17 gi|41614855|ref|NP_963353.1| - 0.052 13.6 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE KH_4 PF13083.6 gi|41614855|ref|NP_963353.1| - 0.059 13.2 0.7 0.35 10.8 0.0 2.8 2 1 0 2 2 2 0 KH domain AAA_13 PF13166.6 gi|41614855|ref|NP_963353.1| - 0.14 10.7 3.7 0.5 9.0 3.7 1.8 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|41614855|ref|NP_963353.1| - 0.17 11.6 0.0 0.64 9.7 0.0 2.0 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase ResIII PF04851.15 gi|41614855|ref|NP_963353.1| - 0.17 11.9 1.1 0.45 10.5 0.1 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Phage-tail_1 PF09097.10 gi|41614856|ref|NP_963354.1| - 0.037 13.8 0.1 0.065 13.0 0.1 1.3 1 1 0 1 1 1 0 Baseplate structural protein, domain 1 Glycos_transf_4 PF00953.21 gi|41614857|ref|NP_963355.1| - 8.8e-20 71.3 24.4 4.4e-19 69.0 19.3 2.9 2 1 0 2 2 2 1 Glycosyl transferase family 4 DUF3054 PF11255.8 gi|41614858|ref|NP_963356.1| - 0.0083 16.6 1.2 0.025 15.1 0.6 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF3054) RNase_HII PF01351.18 gi|41614859|ref|NP_963357.1| - 2.4e-43 148.3 0.1 2.8e-43 148.1 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII Lactamase_B_2 PF12706.7 gi|41614860|ref|NP_963358.1| - 1.3e-15 57.5 0.0 5.9e-14 52.0 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|41614860|ref|NP_963358.1| - 7.6e-12 45.6 0.0 1.9e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|41614860|ref|NP_963358.1| - 0.011 15.4 0.0 0.026 14.2 0.0 1.7 1 0 0 1 1 1 0 tRNase Z endonuclease Ribosomal_L23 PF00276.20 gi|41614861|ref|NP_963359.1| - 1.3e-07 31.9 4.4 3.1e-07 30.7 4.4 1.5 1 1 0 1 1 1 1 Ribosomal protein L23 RRM_1 PF00076.22 gi|41614861|ref|NP_963359.1| - 1.4e-05 24.9 0.4 2.1e-05 24.3 0.3 1.4 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PulA_N1 PF17999.1 gi|41614861|ref|NP_963359.1| - 0.00026 21.7 0.1 0.00032 21.4 0.1 1.2 1 0 0 1 1 1 1 Pullulanase N1-terminal domain RRM_3 PF08777.11 gi|41614861|ref|NP_963359.1| - 0.001 19.1 0.2 0.0013 18.7 0.2 1.2 1 0 0 1 1 1 1 RNA binding motif TusA PF01206.17 gi|41614861|ref|NP_963359.1| - 0.0015 18.3 0.1 0.002 17.9 0.1 1.3 1 0 0 1 1 1 1 Sulfurtransferase TusA ANT PF03374.14 gi|41614861|ref|NP_963359.1| - 0.012 16.0 0.3 0.013 15.8 0.3 1.2 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain IF2_N PF04760.15 gi|41614861|ref|NP_963359.1| - 0.039 13.8 0.1 0.17 11.7 0.1 1.9 1 1 1 2 2 2 0 Translation initiation factor IF-2, N-terminal region LytR_C PF13399.6 gi|41614861|ref|NP_963359.1| - 0.099 13.6 0.1 0.15 13.1 0.1 1.3 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator CCB1 PF12046.8 gi|41614861|ref|NP_963359.1| - 0.11 11.8 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B Lactamase_B PF00753.27 gi|41614863|ref|NP_963361.1| - 2.9e-06 27.4 0.1 5.4e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|41614863|ref|NP_963361.1| - 1.9e-05 24.3 0.0 2.8e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF3993 PF13158.6 gi|41614863|ref|NP_963361.1| - 0.082 13.1 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3993) DNA_pol_B PF00136.21 gi|41614864|ref|NP_963362.1| - 1.9e-44 152.2 0.2 3.3e-44 151.4 0.2 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|41614864|ref|NP_963362.1| - 2.1e-35 122.5 18.6 2.1e-35 122.5 18.6 2.5 2 1 0 2 2 2 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|41614864|ref|NP_963362.1| - 3.4e-10 40.2 4.8 3.4e-10 40.2 4.8 2.0 2 0 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|41614864|ref|NP_963362.1| - 1.3e-09 38.1 0.5 1.3e-09 38.1 0.5 2.0 2 0 0 2 2 2 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_A_exo1 PF01612.20 gi|41614864|ref|NP_963362.1| - 0.0032 17.2 0.8 0.011 15.4 0.8 2.0 1 1 0 1 1 1 1 3'-5' exonuclease Glyco_trans_4_2 PF13477.6 gi|41614864|ref|NP_963362.1| - 0.04 13.9 0.5 29 4.7 0.0 3.6 3 1 0 3 3 3 0 Glycosyl transferase 4-like Ribosomal_S11 PF00411.19 gi|41614865|ref|NP_963363.1| - 5.3e-40 136.3 1.8 6.5e-40 136.0 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 ABC_tran PF00005.27 gi|41614870|ref|NP_963368.1| - 1.6e-14 54.6 0.0 1e-13 52.0 0.0 2.0 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|41614870|ref|NP_963368.1| - 8e-13 48.9 1.6 2.1e-05 24.5 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|41614870|ref|NP_963368.1| - 2.2e-12 46.9 0.8 1.9e-05 24.2 0.1 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|41614870|ref|NP_963368.1| - 1.3e-06 28.7 0.1 3e-06 27.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|41614870|ref|NP_963368.1| - 1.4e-06 28.3 1.1 0.0002 21.2 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|41614870|ref|NP_963368.1| - 3.1e-06 27.8 0.7 3.1e-06 27.8 0.7 1.7 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|41614870|ref|NP_963368.1| - 8.2e-05 23.0 2.4 0.00062 20.2 2.4 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|41614870|ref|NP_963368.1| - 0.00046 20.2 0.6 0.57 10.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|41614870|ref|NP_963368.1| - 0.0027 17.4 0.1 0.0051 16.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|41614870|ref|NP_963368.1| - 0.01 15.0 0.2 0.28 10.3 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 gi|41614870|ref|NP_963368.1| - 0.013 15.5 0.6 0.041 13.8 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|41614870|ref|NP_963368.1| - 0.018 15.0 0.5 0.063 13.2 0.2 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 gi|41614870|ref|NP_963368.1| - 0.025 14.6 0.2 2.8 8.0 0.1 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|41614870|ref|NP_963368.1| - 0.027 14.1 0.0 0.048 13.2 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|41614870|ref|NP_963368.1| - 0.051 13.3 0.1 0.071 12.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|41614870|ref|NP_963368.1| - 0.078 10.5 0.1 0.078 10.5 0.1 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) SbcCD_C PF13558.6 gi|41614870|ref|NP_963368.1| - 0.11 12.7 0.0 1 9.6 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 gi|41614870|ref|NP_963368.1| - 0.13 12.4 0.1 0.28 11.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|41614870|ref|NP_963368.1| - 0.13 12.6 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 gi|41614870|ref|NP_963368.1| - 0.14 11.7 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|41614870|ref|NP_963368.1| - 0.17 11.7 0.1 0.47 10.2 0.0 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TniB PF05621.11 gi|41614870|ref|NP_963368.1| - 0.18 11.2 0.5 3.8 6.9 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 gi|41614870|ref|NP_963368.1| - 0.2 11.4 1.0 0.39 10.4 0.1 1.8 2 0 0 2 2 2 0 AAA domain Ribosomal_L5e PF17144.4 gi|41614871|ref|NP_963369.1| - 8.8e-26 90.8 0.3 6e-16 58.9 0.1 2.4 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|41614871|ref|NP_963369.1| - 1.4e-11 45.2 0.5 2.5e-11 44.4 0.5 1.4 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_L18p PF00861.22 gi|41614871|ref|NP_963369.1| - 0.0004 20.7 0.0 0.00058 20.2 0.0 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Beta-Casp PF10996.8 gi|41614872|ref|NP_963370.1| - 5.9e-24 84.5 0.0 2e-23 82.8 0.0 2.0 3 0 0 3 3 3 1 Beta-Casp domain KH_7 PF17214.3 gi|41614872|ref|NP_963370.1| - 2.2e-21 75.6 4.7 6.4e-19 67.7 1.0 4.0 3 1 1 4 4 4 2 KH domain Lactamase_B_6 PF16661.5 gi|41614872|ref|NP_963370.1| - 2e-17 63.2 0.0 4.4e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|41614872|ref|NP_963370.1| - 7.9e-14 51.3 0.0 1.9e-13 50.1 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|41614872|ref|NP_963370.1| - 4.8e-09 36.5 0.0 5.3e-08 33.1 0.0 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|41614872|ref|NP_963370.1| - 8.6e-09 35.2 0.0 1.7e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|41614872|ref|NP_963370.1| - 0.0037 17.2 0.0 0.0078 16.1 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain ELFV_dehydrog PF00208.21 gi|41614873|ref|NP_963371.1| - 1.2e-67 228.1 1.7 1.9e-67 227.5 1.7 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|41614873|ref|NP_963371.1| - 6e-52 174.9 0.0 2.8e-51 172.8 0.0 2.0 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AdoHcyase_NAD PF00670.21 gi|41614873|ref|NP_963371.1| - 0.056 13.5 0.7 0.1 12.6 0.7 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AP_endonuc_2 PF01261.24 gi|41614874|ref|NP_963372.1| - 8.2e-21 74.4 0.0 1.6e-20 73.4 0.0 1.5 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel AHJR-like PF18743.1 gi|41614874|ref|NP_963372.1| - 0.033 13.8 0.1 20 4.8 0.0 3.1 3 0 0 3 3 3 0 REase_AHJR-like DUF4853 PF16145.5 gi|41614874|ref|NP_963372.1| - 0.052 13.7 0.0 0.18 12.0 0.0 1.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4853) DUF4434 PF14488.6 gi|41614874|ref|NP_963372.1| - 0.061 13.3 0.0 15 5.6 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) Glu-tRNAGln PF02686.15 gi|41614874|ref|NP_963372.1| - 0.075 13.3 0.0 0.18 12.1 0.0 1.6 1 0 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit DUF1987 PF09345.10 gi|41614874|ref|NP_963372.1| - 0.079 12.6 0.2 0.76 9.5 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1987) RtcB PF01139.17 gi|41614875|ref|NP_963373.1| - 1.1e-159 532.1 0.0 1.3e-159 531.9 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Folliculin_C PF16692.5 gi|41614878|ref|NP_963376.1| - 0.075 12.7 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Folliculin C-terminal domain GTP_EFTU PF00009.27 gi|41614879|ref|NP_963377.1| - 1.9e-55 187.4 0.1 2.3e-55 187.2 0.1 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|41614879|ref|NP_963377.1| - 1.1e-30 106.2 0.0 2.6e-30 105.0 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|41614879|ref|NP_963377.1| - 1.2e-18 67.3 1.0 6.2e-18 65.0 0.6 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|41614879|ref|NP_963377.1| - 7.6e-06 26.0 0.2 3.6e-05 23.8 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|41614879|ref|NP_963377.1| - 8.7e-05 22.3 3.5 0.00015 21.6 0.8 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 4 RsgA_GTPase PF03193.16 gi|41614879|ref|NP_963377.1| - 0.017 15.1 1.9 0.12 12.3 0.7 2.2 1 1 1 2 2 2 0 RsgA GTPase IFT81_CH PF18383.1 gi|41614879|ref|NP_963377.1| - 0.1 12.9 0.1 0.21 11.8 0.1 1.5 1 0 0 1 1 1 0 Intraflagellar transport 81 calponin homology domain cobW PF02492.19 gi|41614879|ref|NP_963377.1| - 0.17 11.5 0.7 0.3 10.7 0.7 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Ribosomal_S10 PF00338.22 gi|41614880|ref|NP_963378.1| - 2.8e-23 82.0 0.9 3.2e-23 81.8 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e CBS PF00571.28 gi|41614881|ref|NP_963379.1| - 2.6e-14 53.4 4.2 3.6e-07 30.5 0.8 3.4 3 0 0 3 3 3 2 CBS domain SMI1_KNR4 PF09346.10 gi|41614883|ref|NP_963381.1| - 0.31 11.4 4.7 0.58 10.5 3.6 2.1 1 1 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) AAA_11 PF13086.6 gi|41614883|ref|NP_963381.1| - 0.35 10.6 4.1 0.82 9.4 4.1 1.6 1 0 0 1 1 1 0 AAA domain U1snRNP70_N PF12220.8 gi|41614883|ref|NP_963381.1| - 0.89 10.2 17.6 0.1 13.3 4.9 3.2 4 0 0 4 4 4 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Peptidase_S49_N PF08496.10 gi|41614883|ref|NP_963381.1| - 0.97 9.5 15.9 0.081 13.0 3.6 2.6 2 0 0 2 2 2 0 Peptidase family S49 N-terminal Afi1 PF07792.12 gi|41614883|ref|NP_963381.1| - 0.98 9.9 6.7 1.4 9.4 4.9 2.2 2 0 0 2 2 2 0 Docking domain of Afi1 for Arf3 in vesicle trafficking tRNA_synt_1c_R2 PF04557.15 gi|41614883|ref|NP_963381.1| - 1.3 10.0 18.6 0.63 11.0 5.2 2.5 2 0 0 2 2 2 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 RPA43_OB PF17875.1 gi|41614883|ref|NP_963381.1| - 2.7 8.6 9.3 2.3 8.9 2.4 2.3 2 0 0 2 2 2 0 RPA43 OB domain in RNA Pol I BNIP2 PF12496.8 gi|41614883|ref|NP_963381.1| - 3.8 8.0 10.1 0.14 12.6 2.0 2.4 3 0 0 3 3 3 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 YlbD_coat PF14071.6 gi|41614883|ref|NP_963381.1| - 6.7 7.0 20.0 3.9 7.8 7.1 3.6 5 0 0 5 5 5 0 Putative coat protein XPG_I PF00867.18 gi|41614884|ref|NP_963382.1| - 3.3e-28 97.9 0.0 6.7e-28 96.9 0.0 1.5 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|41614884|ref|NP_963382.1| - 3.4e-22 78.8 0.0 6e-22 78.0 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|41614884|ref|NP_963382.1| - 0.0013 19.3 0.9 0.0071 16.9 0.0 2.3 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH PF00633.23 gi|41614884|ref|NP_963382.1| - 0.0055 16.5 1.1 0.01 15.6 0.4 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc_N PF02739.16 gi|41614884|ref|NP_963382.1| - 0.011 15.7 0.0 0.035 14.0 0.0 1.8 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain HHH_5 PF14520.6 gi|41614884|ref|NP_963382.1| - 0.013 16.1 0.0 0.075 13.7 0.0 2.2 3 0 0 3 3 3 0 Helix-hairpin-helix domain RAMPs PF03787.15 gi|41614884|ref|NP_963382.1| - 0.17 11.9 1.7 0.23 11.5 1.7 1.2 1 0 0 1 1 1 0 RAMP superfamily tRNA-synt_1f PF01921.18 gi|41614885|ref|NP_963383.1| - 1.6e-86 290.5 3.5 2.5e-86 289.8 3.5 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|41614885|ref|NP_963383.1| - 2.2e-05 23.4 0.3 0.00079 18.3 0.1 2.4 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|41614885|ref|NP_963383.1| - 2.3e-05 23.9 1.6 0.13 11.6 0.1 2.8 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain PWI PF01480.17 gi|41614885|ref|NP_963383.1| - 0.00022 21.5 0.5 0.0025 18.1 0.1 2.9 3 0 0 3 3 3 1 PWI domain tRNA-synt_1b PF00579.25 gi|41614885|ref|NP_963383.1| - 0.011 15.1 0.1 0.16 11.2 0.1 2.5 2 1 0 2 2 2 0 tRNA synthetases class I (W and Y) tRNA-synt_1c PF00749.21 gi|41614885|ref|NP_963383.1| - 0.032 13.1 0.0 0.032 13.1 0.0 2.7 2 1 1 3 3 3 0 tRNA synthetases class I (E and Q), catalytic domain T6PP_N PF18572.1 gi|41614885|ref|NP_963383.1| - 0.053 13.4 0.3 0.19 11.5 0.1 2.1 2 0 0 2 2 2 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain DUF2321 PF10083.9 gi|41614885|ref|NP_963383.1| - 0.077 12.6 0.2 0.077 12.6 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) DUF658 PF04936.12 gi|41614885|ref|NP_963383.1| - 0.13 12.0 5.9 0.42 10.3 0.5 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF658) Zn_ribbon_recom PF13408.6 gi|41614885|ref|NP_963383.1| - 0.97 10.0 3.3 3.4 8.3 3.3 1.9 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain Turandot PF07240.11 gi|41614885|ref|NP_963383.1| - 4.8 7.2 7.0 9.9 6.2 0.1 3.2 3 0 0 3 3 3 0 Stress-inducible humoral factor Turandot Polysacc_synt_C PF14667.6 gi|41614887|ref|NP_963385.1| - 1.3e-07 31.8 7.8 1.3e-07 31.8 7.8 4.8 1 1 1 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|41614887|ref|NP_963385.1| - 0.00035 19.9 20.4 0.00035 19.9 20.4 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein RL10P_insert PF17777.1 gi|41614888|ref|NP_963386.1| - 2.6e-20 72.2 1.3 8.7e-20 70.5 1.3 1.9 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 gi|41614888|ref|NP_963386.1| - 5.6e-19 68.1 4.3 1e-18 67.3 3.6 1.7 2 0 0 2 2 2 1 Ribosomal protein L10 IF2_N PF04760.15 gi|41614888|ref|NP_963386.1| - 0.00044 20.0 5.8 0.99 9.3 0.0 4.9 5 1 1 6 6 6 2 Translation initiation factor IF-2, N-terminal region SepF PF04472.12 gi|41614888|ref|NP_963386.1| - 0.0051 17.1 0.1 0.015 15.6 0.1 1.8 1 0 0 1 1 1 1 Cell division protein SepF DUF5330 PF17264.2 gi|41614888|ref|NP_963386.1| - 0.11 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5330) 7TMR-HDED PF07697.11 gi|41614888|ref|NP_963386.1| - 1.3 9.1 11.5 5.8 7.0 9.3 3.1 2 1 0 2 2 2 0 7TM-HD extracellular Ribosomal_L14 PF00238.19 gi|41614889|ref|NP_963387.1| - 8e-32 109.9 0.7 9e-32 109.7 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L5 PF00281.19 gi|41614891|ref|NP_963389.1| - 2.3e-20 72.7 0.1 4.2e-20 71.8 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_L5_C PF00673.21 gi|41614891|ref|NP_963389.1| - 2.4e-18 66.1 0.0 7.4e-18 64.5 0.0 1.7 2 0 0 2 2 2 1 ribosomal L5P family C-terminus HTH_17 PF12728.7 gi|41614891|ref|NP_963389.1| - 0.05 13.8 2.5 0.5 10.6 1.7 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain AIM24 PF01987.17 gi|41614892|ref|NP_963390.1| - 1.1e-07 31.8 0.0 4.3e-05 23.4 0.0 2.3 1 1 0 2 2 2 2 Mitochondrial biogenesis AIM24 LOR PF04525.12 gi|41614892|ref|NP_963390.1| - 0.04 13.5 0.1 3.2 7.3 0.0 2.1 2 0 0 2 2 2 0 LURP-one-related FlgO PF17680.1 gi|41614892|ref|NP_963390.1| - 0.14 11.9 0.0 6.8 6.4 0.0 2.1 2 0 0 2 2 2 0 FlgO protein GNAT_acetyltr_2 PF13718.6 gi|41614893|ref|NP_963391.1| - 4.7e-38 130.8 0.0 1.8e-22 79.8 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 Acetyltransf_7 PF13508.7 gi|41614893|ref|NP_963391.1| - 4.5e-05 23.8 0.0 9.4e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|41614893|ref|NP_963391.1| - 0.00048 20.4 0.0 0.00096 19.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|41614893|ref|NP_963391.1| - 0.0012 18.7 0.0 0.0053 16.7 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|41614893|ref|NP_963391.1| - 0.019 14.9 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SNase PF00565.17 gi|41614894|ref|NP_963392.1| - 9.1e-11 42.2 0.0 1.6e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Staphylococcal nuclease homologue TrmB PF01978.19 gi|41614895|ref|NP_963393.1| - 8.2e-22 76.9 0.0 2.7e-21 75.2 0.0 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|41614895|ref|NP_963393.1| - 6.1e-06 25.6 0.4 9.7e-06 24.9 0.4 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB MarR_2 PF12802.7 gi|41614895|ref|NP_963393.1| - 0.00027 20.8 0.1 0.0013 18.5 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 gi|41614895|ref|NP_963393.1| - 0.00056 19.7 0.2 0.0016 18.2 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|41614895|ref|NP_963393.1| - 0.00076 19.3 0.1 0.015 15.2 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|41614895|ref|NP_963393.1| - 0.0031 17.8 0.1 0.016 15.5 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator Resolvase PF00239.21 gi|41614895|ref|NP_963393.1| - 0.0093 16.1 0.7 0.017 15.2 0.7 1.5 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_24 PF13412.6 gi|41614895|ref|NP_963393.1| - 0.011 15.3 1.0 0.02 14.4 0.0 2.0 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Heme_oxygenase PF01126.20 gi|41614895|ref|NP_963393.1| - 0.021 14.6 1.0 0.041 13.7 0.1 1.8 2 1 0 2 2 2 0 Heme oxygenase SelB-wing_3 PF09107.11 gi|41614895|ref|NP_963393.1| - 0.044 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Elongation factor SelB, winged helix EAP30 PF04157.16 gi|41614895|ref|NP_963393.1| - 0.097 11.9 0.1 4.5 6.5 0.0 2.3 2 0 0 2 2 2 0 EAP30/Vps36 family DUF4523 PF15023.6 gi|41614895|ref|NP_963393.1| - 0.15 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) HTH_20 PF12840.7 gi|41614895|ref|NP_963393.1| - 0.31 11.1 1.0 1.1 9.4 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_L11 PF00298.19 gi|41614898|ref|NP_963396.1| - 4.4e-22 78.4 0.8 7.2e-22 77.7 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 gi|41614898|ref|NP_963396.1| - 4.8e-21 74.4 1.4 8.1e-21 73.6 0.6 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain ATP-synt_ab PF00006.25 gi|41614899|ref|NP_963397.1| - 7.6e-88 293.7 0.0 1e-87 293.2 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|41614899|ref|NP_963397.1| - 2.7e-39 133.8 0.1 8.6e-39 132.1 0.1 1.9 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|41614899|ref|NP_963397.1| - 1.1e-12 48.3 0.7 2.3e-12 47.2 0.7 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|41614899|ref|NP_963397.1| - 0.0011 19.3 0.0 0.0043 17.3 0.0 2.0 1 1 1 2 2 2 1 AAA domain Peptidase_M23 PF01551.22 gi|41614899|ref|NP_963397.1| - 0.023 14.9 0.1 4.2 7.7 0.0 2.6 2 0 0 2 2 2 0 Peptidase family M23 tRNA-synt_His PF13393.6 gi|41614900|ref|NP_963398.1| - 5.9e-41 140.7 0.0 2.3e-40 138.8 0.0 1.9 1 1 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|41614900|ref|NP_963398.1| - 7.9e-13 48.4 0.7 2.4e-12 46.8 0.7 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|41614900|ref|NP_963398.1| - 3.1e-09 37.1 0.0 1.4e-08 34.9 0.0 1.8 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 gi|41614900|ref|NP_963398.1| - 0.0043 16.6 0.0 0.0077 15.7 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) TIR_2 PF13676.6 gi|41614900|ref|NP_963398.1| - 0.025 15.2 0.3 0.21 12.2 0.0 2.2 2 0 0 2 2 2 0 TIR domain Phage_ABA_S PF18066.1 gi|41614900|ref|NP_963398.1| - 0.3 11.8 3.8 1.9 9.2 0.0 3.1 3 1 0 3 3 3 0 Phage ABA sandwich domain DUF5645 PF18713.1 gi|41614901|ref|NP_963399.1| - 0.078 13.3 0.2 0.23 11.7 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) TraT PF05818.12 gi|41614901|ref|NP_963399.1| - 0.08 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Ribosomal_S6e PF01092.19 gi|41614902|ref|NP_963400.1| - 2.4e-28 98.6 0.8 1e-27 96.6 0.8 1.7 1 1 0 1 1 1 1 Ribosomal protein S6e DUF2451 PF10474.9 gi|41614903|ref|NP_963401.1| - 0.0084 15.9 0.4 0.29 10.9 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function C-terminus (DUF2451) eRF1_1 PF03463.15 gi|41614904|ref|NP_963402.1| - 6.2e-08 32.7 2.2 1.8e-07 31.2 0.4 2.1 2 0 0 2 2 2 1 eRF1 domain 1 Acetyltransf_11 PF13720.6 gi|41614904|ref|NP_963402.1| - 0.015 15.7 0.4 0.067 13.7 0.2 2.0 2 0 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF4252 PF14060.6 gi|41614904|ref|NP_963402.1| - 0.054 13.4 5.0 0.29 11.0 0.6 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4252) Acetyltransf_8 PF13523.6 gi|41614904|ref|NP_963402.1| - 0.1 12.3 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TRM PF02005.16 gi|41614905|ref|NP_963403.1| - 5.7e-85 285.8 0.1 7.6e-85 285.3 0.1 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 gi|41614905|ref|NP_963403.1| - 0.00025 20.8 0.1 0.00037 20.3 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 gi|41614905|ref|NP_963403.1| - 0.00036 20.1 0.0 0.00057 19.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RecR PF02132.15 gi|41614905|ref|NP_963403.1| - 0.0035 16.9 0.2 0.0064 16.0 0.2 1.5 1 0 0 1 1 1 1 RecR protein zf-ribbon_3 PF13248.6 gi|41614905|ref|NP_963403.1| - 0.017 14.5 1.2 0.03 13.7 1.2 1.4 1 0 0 1 1 1 0 zinc-ribbon domain PrmA PF06325.13 gi|41614905|ref|NP_963403.1| - 0.065 12.6 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) zf-C3HC4_3 PF13920.6 gi|41614905|ref|NP_963403.1| - 0.065 13.1 0.6 0.098 12.5 0.6 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CP2 PF04516.15 gi|41614905|ref|NP_963403.1| - 0.12 11.6 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 CP2 transcription factor YdjO PF14169.6 gi|41614905|ref|NP_963403.1| - 0.43 10.4 2.0 34 4.3 1.6 2.4 2 0 0 2 2 2 0 Cold-inducible protein YdjO ZapD PF07072.11 gi|41614906|ref|NP_963404.1| - 0.0026 17.5 0.0 0.036 13.8 0.0 2.1 1 1 1 2 2 2 1 Cell division protein FTCD_C PF04961.12 gi|41614906|ref|NP_963404.1| - 0.081 12.7 1.0 0.34 10.7 0.1 2.1 2 0 0 2 2 2 0 Formiminotransferase-cyclodeaminase DUF1640 PF07798.11 gi|41614906|ref|NP_963404.1| - 3.1 7.8 6.3 16 5.5 3.1 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF1640) RNase_PH PF01138.21 gi|41614907|ref|NP_963405.1| - 3.6e-14 53.4 0.0 6.6e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|41614907|ref|NP_963405.1| - 1.3e-09 38.0 0.5 3e-08 33.6 0.0 2.5 3 0 0 3 3 3 1 3' exoribonuclease family, domain 2 TGS PF02824.21 gi|41614908|ref|NP_963406.1| - 2.4e-15 56.3 0.1 4.6e-15 55.4 0.1 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1_Xtn PF16897.5 gi|41614908|ref|NP_963406.1| - 3.5e-10 39.9 1.7 6e-10 39.1 1.1 1.7 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|41614908|ref|NP_963406.1| - 1.1e-07 31.9 0.2 4e-07 30.1 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|41614908|ref|NP_963406.1| - 2.6e-05 23.8 0.0 4.8e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B SRPRB PF09439.10 gi|41614908|ref|NP_963406.1| - 6.9e-05 22.3 0.6 0.00046 19.7 0.0 2.2 1 1 1 2 2 2 1 Signal recognition particle receptor beta subunit RTT107_BRCT_6 PF16771.5 gi|41614908|ref|NP_963406.1| - 0.00076 19.6 2.0 0.0011 19.1 0.2 2.1 2 1 0 2 2 2 1 Regulator of Ty1 transposition protein 107 BRCT domain Dynamin_N PF00350.23 gi|41614908|ref|NP_963406.1| - 0.0098 16.0 3.4 0.045 13.8 0.3 2.7 2 1 0 2 2 2 1 Dynamin family AAA_14 PF13173.6 gi|41614908|ref|NP_963406.1| - 0.018 15.1 0.1 0.26 11.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain LMWPc PF01451.21 gi|41614908|ref|NP_963406.1| - 0.031 14.7 0.0 0.077 13.4 0.0 1.6 1 0 0 1 1 1 0 Low molecular weight phosphotyrosine protein phosphatase YchF-GTPase_C PF06071.13 gi|41614908|ref|NP_963406.1| - 0.032 14.4 0.6 1.8 8.8 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF933) Roc PF08477.13 gi|41614908|ref|NP_963406.1| - 0.041 14.1 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Ub-RnfH PF03658.14 gi|41614908|ref|NP_963406.1| - 0.1 13.0 0.0 0.37 11.2 0.0 2.0 2 0 0 2 2 2 0 RnfH family Ubiquitin DUF1192 PF06698.11 gi|41614908|ref|NP_963406.1| - 0.96 9.5 4.1 2.9 8.0 4.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) RNA_binding PF01877.17 gi|41614909|ref|NP_963407.1| - 8.6e-18 64.7 2.4 1.2e-17 64.3 2.4 1.2 1 0 0 1 1 1 1 RNA binding Imm7 PF15585.6 gi|41614909|ref|NP_963407.1| - 0.067 13.5 0.3 0.45 10.8 0.1 2.0 1 1 1 2 2 2 0 Immunity protein 7 LANC_like PF05147.13 gi|41614909|ref|NP_963407.1| - 0.12 10.9 1.1 0.16 10.5 1.1 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein IF-2B PF01008.17 gi|41614909|ref|NP_963407.1| - 0.16 11.2 0.2 0.21 10.8 0.2 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family Cep57_MT_bd PF06657.13 gi|41614909|ref|NP_963407.1| - 1.6 9.2 6.0 21 5.7 0.3 2.9 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 HD PF01966.22 gi|41614910|ref|NP_963408.1| - 5.4e-13 49.2 0.3 6.8e-12 45.7 0.0 2.4 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 gi|41614910|ref|NP_963408.1| - 0.00075 19.0 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 HDOD domain tRNA-synt_1b PF00579.25 gi|41614911|ref|NP_963409.1| - 2.1e-36 125.8 0.0 3.1e-36 125.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) HEPN_AbiU2 PF18734.1 gi|41614911|ref|NP_963409.1| - 0.13 11.8 8.1 1.8 8.1 0.3 3.2 2 2 2 4 4 4 0 AbiU2 Taeniidae_ag PF05596.11 gi|41614911|ref|NP_963409.1| - 1.3 9.1 6.2 11 6.1 0.1 4.1 4 0 0 4 4 4 0 Taeniidae antigen TMEM190 PF15431.6 gi|41614912|ref|NP_963410.1| - 0.2 11.8 1.9 0.21 11.7 1.4 1.5 1 1 0 1 1 1 0 Transmembrane protein 190 DHH PF01368.20 gi|41614913|ref|NP_963411.1| - 0.00011 22.3 0.0 0.0002 21.5 0.0 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|41614913|ref|NP_963411.1| - 0.00043 20.7 0.0 0.0017 18.8 0.0 2.1 2 1 0 2 2 2 1 DHHA1 domain AAA_18 PF13238.6 gi|41614914|ref|NP_963412.1| - 1.2e-18 67.9 0.0 4.4e-18 66.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|41614914|ref|NP_963412.1| - 1.4e-09 38.2 0.0 3.4e-07 30.5 0.0 2.2 2 0 0 2 2 2 1 Shikimate kinase AAA_17 PF13207.6 gi|41614914|ref|NP_963412.1| - 4.5e-09 36.8 0.1 6.4e-06 26.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain dNK PF01712.19 gi|41614914|ref|NP_963412.1| - 7.3e-08 32.5 0.4 0.0091 15.9 0.0 2.2 1 1 1 2 2 2 2 Deoxynucleoside kinase AAA_33 PF13671.6 gi|41614914|ref|NP_963412.1| - 2.7e-07 30.9 0.0 0.00016 21.9 0.0 2.3 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 gi|41614914|ref|NP_963412.1| - 1.6e-06 28.6 0.1 2.2e-06 28.1 0.1 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cytidylate_kin2 PF13189.6 gi|41614914|ref|NP_963412.1| - 1.4e-05 25.3 0.1 3.3e-05 24.1 0.1 1.6 2 0 0 2 2 2 1 Cytidylate kinase-like family Thymidylate_kin PF02223.17 gi|41614914|ref|NP_963412.1| - 3.8e-05 23.4 0.2 0.17 11.6 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_28 PF13521.6 gi|41614914|ref|NP_963412.1| - 6.6e-05 23.2 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|41614914|ref|NP_963412.1| - 0.00012 21.9 2.7 0.00062 19.6 0.1 2.5 2 1 0 2 2 2 1 Cytidylate kinase Rad17 PF03215.15 gi|41614914|ref|NP_963412.1| - 0.00017 21.6 0.0 0.0014 18.5 0.0 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain NTPase_1 PF03266.15 gi|41614914|ref|NP_963412.1| - 0.00083 19.3 0.9 0.0011 18.9 0.1 1.6 2 0 0 2 2 2 1 NTPase AAA_14 PF13173.6 gi|41614914|ref|NP_963412.1| - 0.0015 18.6 0.4 0.0039 17.2 0.1 1.8 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.10 gi|41614914|ref|NP_963412.1| - 0.0017 17.9 0.0 0.0035 16.8 0.0 1.6 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_22 PF13401.6 gi|41614914|ref|NP_963412.1| - 0.0024 18.1 0.2 0.0025 18.1 0.2 1.5 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|41614914|ref|NP_963412.1| - 0.0026 18.1 0.0 0.0044 17.4 0.0 1.4 1 0 0 1 1 1 1 RNA helicase PRK PF00485.18 gi|41614914|ref|NP_963412.1| - 0.0044 16.8 0.0 0.22 11.3 0.0 2.2 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 gi|41614914|ref|NP_963412.1| - 0.0048 16.2 0.0 0.024 13.9 0.0 2.0 3 0 0 3 3 3 1 Zeta toxin MMR_HSR1 PF01926.23 gi|41614914|ref|NP_963412.1| - 0.0048 17.0 0.4 0.045 13.8 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|41614914|ref|NP_963412.1| - 0.0051 16.6 1.1 0.0087 15.8 0.3 1.8 2 1 0 2 2 2 1 AAA domain AAA_3 PF07726.11 gi|41614914|ref|NP_963412.1| - 0.0083 16.0 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 gi|41614914|ref|NP_963412.1| - 0.01 14.8 0.4 0.024 13.6 0.1 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ADK PF00406.22 gi|41614914|ref|NP_963412.1| - 0.011 15.9 0.1 0.71 10.0 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase RuvB_N PF05496.12 gi|41614914|ref|NP_963412.1| - 0.011 15.5 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain APS_kinase PF01583.20 gi|41614914|ref|NP_963412.1| - 0.014 15.3 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase CoaE PF01121.20 gi|41614914|ref|NP_963412.1| - 0.017 14.8 0.1 0.042 13.5 0.0 1.7 1 1 1 2 2 2 0 Dephospho-CoA kinase TsaE PF02367.17 gi|41614914|ref|NP_963412.1| - 0.019 15.0 0.2 0.024 14.7 0.2 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 gi|41614914|ref|NP_963412.1| - 0.025 15.0 0.1 0.042 14.2 0.1 1.3 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|41614914|ref|NP_963412.1| - 0.028 13.6 0.1 0.046 12.9 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 gi|41614914|ref|NP_963412.1| - 0.042 13.6 0.2 0.084 12.6 0.1 1.5 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|41614914|ref|NP_963412.1| - 0.049 13.6 0.1 0.078 12.9 0.1 1.3 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 gi|41614914|ref|NP_963412.1| - 0.05 14.1 0.7 0.059 13.9 0.5 1.5 1 1 0 1 1 1 0 ABC transporter AAA_5 PF07728.14 gi|41614914|ref|NP_963412.1| - 0.056 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Viral_helicase1 PF01443.18 gi|41614914|ref|NP_963412.1| - 0.085 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ArsA_ATPase PF02374.15 gi|41614914|ref|NP_963412.1| - 0.094 11.9 0.4 0.2 10.8 0.1 1.6 2 0 0 2 2 2 0 Anion-transporting ATPase Hydin_ADK PF17213.3 gi|41614914|ref|NP_963412.1| - 0.19 12.0 0.2 0.29 11.4 0.2 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain AAA_30 PF13604.6 gi|41614914|ref|NP_963412.1| - 0.28 10.9 0.4 0.42 10.3 0.4 1.2 1 0 0 1 1 1 0 AAA domain AAA_31 PF13614.6 gi|41614915|ref|NP_963413.1| - 8.3e-22 77.9 1.6 1.3e-21 77.3 0.8 1.7 1 1 1 2 2 2 1 AAA domain CbiA PF01656.23 gi|41614915|ref|NP_963413.1| - 2e-19 69.9 0.3 3.4e-19 69.2 0.3 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|41614915|ref|NP_963413.1| - 1.8e-17 63.6 2.2 2.3e-15 56.7 2.2 2.9 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_26 PF13500.6 gi|41614915|ref|NP_963413.1| - 5.6e-09 36.1 0.8 7.6e-08 32.4 0.8 2.5 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|41614915|ref|NP_963413.1| - 9e-08 31.6 4.8 6.9e-05 22.2 2.0 3.4 1 1 2 3 3 3 2 Anion-transporting ATPase Fer4_NifH PF00142.18 gi|41614915|ref|NP_963413.1| - 2.4e-07 30.5 0.3 0.0079 15.7 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|41614915|ref|NP_963413.1| - 1.1e-06 28.4 0.1 0.0089 15.5 0.0 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|41614915|ref|NP_963413.1| - 0.00015 21.1 0.4 0.00053 19.3 0.4 1.8 1 1 0 1 1 1 1 ATPase MipZ AAA_18 PF13238.6 gi|41614915|ref|NP_963413.1| - 0.00023 21.7 0.4 0.0012 19.4 0.1 2.2 2 1 0 2 2 1 1 AAA domain AAA_25 PF13481.6 gi|41614915|ref|NP_963413.1| - 0.00071 19.2 0.6 0.0037 16.8 0.6 1.9 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|41614915|ref|NP_963413.1| - 0.00088 19.0 1.9 0.49 10.0 0.2 2.5 2 1 0 2 2 2 2 SRP54-type protein, GTPase domain RuvB_N PF05496.12 gi|41614915|ref|NP_963413.1| - 0.0025 17.6 0.4 2.3 8.0 0.1 2.3 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 gi|41614915|ref|NP_963413.1| - 0.02 15.4 0.1 0.06 13.8 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|41614915|ref|NP_963413.1| - 0.059 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|41614915|ref|NP_963413.1| - 0.06 13.1 0.8 0.19 11.4 0.8 1.8 1 1 0 1 1 1 0 AAA domain Anth_synt_I_N PF04715.13 gi|41614915|ref|NP_963413.1| - 0.11 12.7 0.0 0.25 11.5 0.0 1.6 1 1 1 2 2 2 0 Anthranilate synthase component I, N terminal region VirC1 PF07015.11 gi|41614915|ref|NP_963413.1| - 0.42 9.9 2.1 5.8 6.1 0.1 3.1 3 1 1 4 4 4 0 VirC1 protein GFP PF01353.22 gi|41614916|ref|NP_963414.1| - 0.11 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Green fluorescent protein Glyco_transf_10 PF00852.19 gi|41614917|ref|NP_963415.1| - 0.0031 17.2 0.4 0.0036 17.0 0.4 1.3 1 1 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term YlbD_coat PF14071.6 gi|41614917|ref|NP_963415.1| - 0.012 15.9 4.9 0.014 15.6 4.4 1.4 1 1 0 1 1 1 0 Putative coat protein Dynein_C PF18199.1 gi|41614917|ref|NP_963415.1| - 0.021 14.1 2.2 0.025 13.8 2.2 1.1 1 0 0 1 1 1 0 Dynein heavy chain C-terminal domain DUF745 PF05335.13 gi|41614917|ref|NP_963415.1| - 0.033 13.9 1.2 0.043 13.5 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF501 PF04417.12 gi|41614917|ref|NP_963415.1| - 0.075 12.8 0.8 0.12 12.2 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF501) AAA-ATPase_like PF09820.9 gi|41614917|ref|NP_963415.1| - 0.15 11.4 4.7 0.2 11.1 4.7 1.1 1 0 0 1 1 1 0 Predicted AAA-ATPase Glyco_hydro_65m PF03632.15 gi|41614917|ref|NP_963415.1| - 0.24 10.2 4.3 0.28 10.0 4.3 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain DUF3276 PF11680.8 gi|41614917|ref|NP_963415.1| - 0.29 11.3 6.8 0.13 12.4 4.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3276) DUF848 PF05852.11 gi|41614917|ref|NP_963415.1| - 0.5 10.5 9.8 0.45 10.6 3.0 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) FliT PF05400.13 gi|41614917|ref|NP_963415.1| - 0.86 10.5 6.6 0.15 12.9 1.9 1.9 2 0 0 2 2 2 0 Flagellar protein FliT Complex1_LYR_2 PF13233.6 gi|41614917|ref|NP_963415.1| - 0.87 10.4 6.1 1.2 10.0 6.1 1.4 1 1 0 1 1 1 0 Complex1_LYR-like DUF87 PF01935.17 gi|41614917|ref|NP_963415.1| - 1.7 8.7 7.2 2.1 8.4 7.2 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain Cas_DxTHG PF09455.10 gi|41614917|ref|NP_963415.1| - 1.9 8.0 10.4 2.6 7.5 10.4 1.2 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family UPF0449 PF15136.6 gi|41614917|ref|NP_963415.1| - 2.2 8.8 9.0 8.8 6.9 9.0 1.9 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 FapA PF03961.13 gi|41614917|ref|NP_963415.1| - 4.2 5.9 11.7 0.57 8.7 6.8 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A Lactamase_B_2 PF12706.7 gi|41614919|ref|NP_963417.1| - 6.7e-19 68.2 0.0 8.6e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|41614919|ref|NP_963417.1| - 1.5e-08 34.7 0.1 2.4e-08 34.0 0.1 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|41614919|ref|NP_963417.1| - 2.3e-07 31.0 0.3 3.6e-07 30.4 0.3 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily TGT PF01702.18 gi|41614920|ref|NP_963418.1| - 6.8e-55 186.6 0.0 2.2e-54 184.9 0.0 1.7 1 1 0 1 1 1 1 Queuine tRNA-ribosyltransferase GRDB PF07355.12 gi|41614920|ref|NP_963418.1| - 0.12 11.5 0.1 3.3 6.9 0.0 2.1 2 0 0 2 2 2 0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Fibrillarin PF01269.17 gi|41614921|ref|NP_963419.1| - 2.8e-94 314.5 0.1 3.3e-94 314.2 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin PCMT PF01135.19 gi|41614921|ref|NP_963419.1| - 0.072 12.8 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Asparaginase PF00710.20 gi|41614922|ref|NP_963420.1| - 1.9e-44 151.5 0.0 3.3e-44 150.7 0.0 1.4 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|41614922|ref|NP_963420.1| - 7.3e-18 64.8 0.0 4.3e-17 62.4 0.0 2.1 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|41614922|ref|NP_963420.1| - 6.3e-08 31.8 3.0 6.3e-08 31.8 3.0 1.9 2 0 0 2 2 2 1 GatD N-terminal domain DUF123 PF01986.16 gi|41614923|ref|NP_963421.1| - 1.2e-15 57.7 0.0 1.6e-15 57.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 DUF4003 PF13170.6 gi|41614923|ref|NP_963421.1| - 0.034 13.5 0.2 0.042 13.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4003) Carbam_trans_N PF02543.15 gi|41614924|ref|NP_963422.1| - 4.1e-73 247.0 0.0 7.2e-73 246.2 0.0 1.4 1 1 0 1 1 1 1 Carbamoyltransferase N-terminus Carbam_trans_C PF16861.5 gi|41614924|ref|NP_963422.1| - 1.6e-64 216.6 0.0 2.5e-64 215.9 0.0 1.3 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Peptidase_M22 PF00814.25 gi|41614924|ref|NP_963422.1| - 0.079 12.7 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family Phosphodiest PF01663.22 gi|41614925|ref|NP_963423.1| - 5.4e-11 42.7 0.2 1.9e-09 37.6 0.2 2.3 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|41614925|ref|NP_963423.1| - 9.7e-06 25.8 0.0 0.00036 20.7 0.0 2.4 2 0 0 2 2 2 1 PglZ domain Metalloenzyme PF01676.18 gi|41614925|ref|NP_963423.1| - 0.0062 15.9 0.0 0.021 14.2 0.0 1.8 2 0 0 2 2 2 1 Metalloenzyme superfamily eIF-1a PF01176.19 gi|41614926|ref|NP_963424.1| - 1.2e-23 82.7 0.2 2e-23 81.9 0.2 1.4 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 UPF0051 PF01458.17 gi|41614927|ref|NP_963425.1| - 2e-17 63.6 1.5 3.4e-17 62.9 1.5 1.4 1 1 0 1 1 1 1 Uncharacterized protein family (UPF0051) Translin PF01997.16 gi|41614928|ref|NP_963426.1| - 1.2e-11 45.0 4.9 4.9e-10 39.7 4.9 2.2 1 1 0 1 1 1 1 Translin family CENP-H PF05837.12 gi|41614928|ref|NP_963426.1| - 1.3 9.5 5.2 0.74 10.2 2.6 1.8 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Tubulin PF00091.25 gi|41614929|ref|NP_963427.1| - 5.6e-40 137.6 0.1 1.4e-39 136.3 0.1 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|41614929|ref|NP_963427.1| - 9e-26 90.0 0.0 2.9e-25 88.4 0.0 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain DUF3236 PF11576.8 gi|41614929|ref|NP_963427.1| - 0.0055 16.4 0.6 0.058 13.1 0.4 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3236) Tubulin_2 PF13809.6 gi|41614929|ref|NP_963427.1| - 0.012 14.9 1.4 0.9 8.7 0.1 2.2 2 0 0 2 2 2 0 Tubulin like ydhR PF08803.11 gi|41614929|ref|NP_963427.1| - 0.013 15.4 0.0 0.077 12.9 0.0 2.3 2 0 0 2 2 2 0 Putative mono-oxygenase ydhR Toxin-deaminase PF14424.6 gi|41614929|ref|NP_963427.1| - 0.023 14.8 0.1 0.066 13.3 0.0 1.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases AlaDh_PNT_C PF01262.21 gi|41614929|ref|NP_963427.1| - 0.032 13.5 0.5 0.13 11.5 0.5 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain ThiF PF00899.21 gi|41614929|ref|NP_963427.1| - 0.099 12.0 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 ThiF family PAE PF03283.13 gi|41614930|ref|NP_963428.1| - 0.09 11.9 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Pectinacetylesterase Longin_2 PF18639.1 gi|41614931|ref|NP_963429.1| - 0.026 14.4 0.3 4.2 7.2 0.0 2.3 2 0 0 2 2 2 0 Yeast longin domain UBA_4 PF14555.6 gi|41614932|ref|NP_963430.1| - 0.048 13.5 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 UBA-like domain DUF4149 PF13664.6 gi|41614936|ref|NP_963434.1| - 0.07 13.5 5.2 0.11 12.9 0.5 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4149) DUF2070 PF09843.9 gi|41614936|ref|NP_963434.1| - 0.88 7.8 12.9 1.2 7.3 12.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1772 PF08592.11 gi|41614936|ref|NP_963434.1| - 1.3 9.3 5.9 0.3 11.4 0.4 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) DUF3852 PF12963.7 gi|41614936|ref|NP_963434.1| - 1.8 9.0 7.7 0.93 9.9 0.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3852) HemX PF04375.14 gi|41614937|ref|NP_963435.1| - 0.00099 18.5 0.1 0.0014 18.0 0.1 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-F_leu_zip PF10473.9 gi|41614937|ref|NP_963435.1| - 0.0072 16.4 2.8 0.0099 15.9 2.8 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 tRNA-synt_1c PF00749.21 gi|41614937|ref|NP_963435.1| - 0.017 14.0 0.1 0.023 13.6 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain CdvA PF18822.1 gi|41614937|ref|NP_963435.1| - 0.025 14.4 7.0 0.042 13.7 7.0 1.2 1 0 0 1 1 1 0 CdvA-like coiled-coil domain TSC22 PF01166.18 gi|41614937|ref|NP_963435.1| - 0.031 14.6 3.3 0.031 14.6 3.3 1.8 2 0 0 2 2 2 0 TSC-22/dip/bun family DUF4535 PF15054.6 gi|41614937|ref|NP_963435.1| - 0.038 13.7 1.4 0.53 10.1 0.4 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) Uso1_p115_C PF04871.13 gi|41614937|ref|NP_963435.1| - 0.087 13.2 6.6 0.13 12.7 6.6 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Chibby PF14645.6 gi|41614937|ref|NP_963435.1| - 0.096 13.1 2.9 0.2 12.1 2.9 1.5 1 0 0 1 1 1 0 Chibby family YabA PF06156.13 gi|41614937|ref|NP_963435.1| - 0.12 13.0 6.2 0.61 10.7 6.2 2.1 1 1 0 1 1 1 0 Initiation control protein YabA Laminin_II PF06009.12 gi|41614937|ref|NP_963435.1| - 0.18 11.8 4.0 0.28 11.2 4.0 1.2 1 0 0 1 1 1 0 Laminin Domain II FapA PF03961.13 gi|41614937|ref|NP_963435.1| - 0.22 10.1 3.6 0.3 9.6 3.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Cnn_1N PF07989.11 gi|41614937|ref|NP_963435.1| - 0.39 10.9 7.8 0.072 13.3 3.5 1.9 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 gi|41614937|ref|NP_963435.1| - 1.3 8.8 11.1 13 5.6 4.3 3.3 2 1 1 3 3 3 0 Septum formation initiator bZIP_1 PF00170.21 gi|41614937|ref|NP_963435.1| - 7.2 6.8 15.1 0.37 10.9 6.3 2.3 2 0 0 2 2 2 0 bZIP transcription factor TMF_DNA_bd PF12329.8 gi|41614937|ref|NP_963435.1| - 9.4 6.3 12.6 0.81 9.7 6.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Cpn60_TCP1 PF00118.24 gi|41614938|ref|NP_963436.1| - 3.1e-187 623.1 19.3 3.5e-187 622.9 19.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PALP PF00291.25 gi|41614938|ref|NP_963436.1| - 0.021 14.2 4.3 0.19 11.1 0.3 2.8 2 2 2 4 4 4 0 Pyridoxal-phosphate dependent enzyme DED PF01335.21 gi|41614938|ref|NP_963436.1| - 0.13 12.6 0.6 5.7 7.3 0.1 2.6 2 0 0 2 2 2 0 Death effector domain YwpF PF14183.6 gi|41614938|ref|NP_963436.1| - 0.13 12.2 2.2 0.36 10.8 0.4 2.4 2 0 0 2 2 2 0 YwpF-like protein S-AdoMet_synt_N PF00438.20 gi|41614938|ref|NP_963436.1| - 8.4 7.1 7.7 9.2 7.0 0.8 3.4 3 1 1 4 4 4 0 S-adenosylmethionine synthetase, N-terminal domain Topo-VIb_trans PF09239.11 gi|41614939|ref|NP_963437.1| - 4.4e-56 189.1 1.6 1.1e-55 187.9 1.6 1.7 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|41614939|ref|NP_963437.1| - 5.6e-12 46.2 0.0 1.2e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|41614939|ref|NP_963437.1| - 2.9e-09 36.9 0.0 1.9e-08 34.2 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A_thal_3526 PF09713.10 gi|41614939|ref|NP_963437.1| - 0.042 14.1 0.0 0.18 12.1 0.0 2.1 1 0 0 1 1 1 0 Plant protein 1589 of unknown function (A_thal_3526) BAF PF02961.14 gi|41614939|ref|NP_963437.1| - 0.061 13.8 0.4 0.25 11.8 0.1 2.2 3 0 0 3 3 3 0 Barrier to autointegration factor HK97-gp10_like PF04883.12 gi|41614939|ref|NP_963437.1| - 1.8 9.6 6.4 6.9 7.7 0.8 3.5 3 0 0 3 3 3 0 Bacteriophage HK97-gp10, putative tail-component HSCB_C PF07743.13 gi|41614939|ref|NP_963437.1| - 4 8.0 9.0 3.4 8.2 0.4 3.7 4 0 0 4 4 4 0 HSCB C-terminal oligomerisation domain HTH_3 PF01381.22 gi|41614940|ref|NP_963438.1| - 7.9e-15 54.7 1.4 1.2e-14 54.1 0.5 1.8 1 1 1 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|41614940|ref|NP_963438.1| - 3.9e-13 49.2 2.0 6.5e-13 48.5 1.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|41614940|ref|NP_963438.1| - 1.6e-07 31.5 0.0 2.6e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|41614940|ref|NP_963438.1| - 3.5e-05 23.6 0.1 7.1e-05 22.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|41614940|ref|NP_963438.1| - 0.0032 17.6 0.6 0.01 16.0 0.2 2.0 1 1 1 2 2 2 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA Sigma70_r1_1 PF03979.14 gi|41614940|ref|NP_963438.1| - 0.0063 16.5 3.4 0.025 14.6 2.9 2.1 1 1 0 1 1 1 1 Sigma-70 factor, region 1.1 HTH_37 PF13744.6 gi|41614940|ref|NP_963438.1| - 0.0071 16.3 0.0 0.019 14.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain ANAPC4 PF12896.7 gi|41614940|ref|NP_963438.1| - 0.034 13.6 0.4 0.07 12.6 0.0 1.6 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 HTH_38 PF13936.6 gi|41614940|ref|NP_963438.1| - 0.038 13.7 0.4 0.098 12.4 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|41614940|ref|NP_963438.1| - 0.07 13.1 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 MarR family Zn_ribbon_2 PF12674.7 gi|41614940|ref|NP_963438.1| - 0.084 13.5 1.1 0.42 11.3 0.1 2.4 1 1 1 2 2 2 0 Putative zinc ribbon domain NMD3 PF04981.13 gi|41614940|ref|NP_963438.1| - 0.12 11.8 3.4 1.2 8.5 0.5 2.1 1 1 1 2 2 2 0 NMD3 family HTH_26 PF13443.6 gi|41614940|ref|NP_963438.1| - 0.13 12.7 0.9 0.19 12.2 0.1 1.7 2 0 0 2 2 1 0 Cro/C1-type HTH DNA-binding domain RecR PF02132.15 gi|41614940|ref|NP_963438.1| - 0.34 10.5 2.3 1.9 8.1 0.3 2.7 2 0 0 2 2 2 0 RecR protein Ribosomal_L4 PF00573.22 gi|41614941|ref|NP_963439.1| - 1.6e-50 171.5 0.6 1.8e-50 171.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family UPF0047 PF01894.17 gi|41614943|ref|NP_963441.1| - 6.7e-36 122.9 0.0 8.6e-36 122.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Radical_SAM PF04055.21 gi|41614944|ref|NP_963442.1| - 9.1e-23 81.5 0.0 2.2e-22 80.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|41614944|ref|NP_963442.1| - 7e-14 51.9 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 B12 binding domain dsDNA_bind PF01984.20 gi|41614945|ref|NP_963443.1| - 1.2e-08 35.2 6.4 4.3e-08 33.4 6.4 1.7 1 1 0 1 1 1 1 Double-stranded DNA-binding domain Proteasom_PSMB PF10508.9 gi|41614945|ref|NP_963443.1| - 0.0024 16.5 2.1 0.0028 16.2 2.1 1.0 1 0 0 1 1 1 1 Proteasome non-ATPase 26S subunit TPR_20 PF14561.6 gi|41614945|ref|NP_963443.1| - 0.0062 16.8 1.6 1.5 9.2 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat HHH_9 PF17674.1 gi|41614945|ref|NP_963443.1| - 0.024 15.6 3.2 0.092 13.7 0.1 2.2 1 1 0 2 2 2 0 HHH domain COMPASS-Shg1 PF05205.12 gi|41614945|ref|NP_963443.1| - 0.048 14.4 4.7 0.065 13.9 4.7 1.3 1 1 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component shg1 DUF2072 PF09845.9 gi|41614945|ref|NP_963443.1| - 0.1 12.9 1.1 0.13 12.6 1.1 1.2 1 0 0 1 1 1 0 Zn-ribbon containing protein NINJA_B PF16136.5 gi|41614945|ref|NP_963443.1| - 0.12 12.7 1.8 0.17 12.3 1.8 1.3 1 0 0 1 1 1 0 Putative nuclear localisation signal PIN_12 PF16289.5 gi|41614945|ref|NP_963443.1| - 0.13 12.8 5.8 0.14 12.6 5.8 1.0 1 0 0 1 1 1 0 PIN domain Hrs_helical PF12210.8 gi|41614945|ref|NP_963443.1| - 0.21 12.1 6.5 0.42 11.2 4.8 1.9 1 1 1 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate AAA_17 PF13207.6 gi|41614946|ref|NP_963444.1| - 1.4e-23 83.8 0.0 1.8e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|41614946|ref|NP_963444.1| - 1.1e-11 45.4 0.1 2e-11 44.6 0.1 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|41614946|ref|NP_963444.1| - 6.3e-07 29.6 0.0 8e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|41614946|ref|NP_963444.1| - 7.9e-06 26.3 0.0 1.3e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 gi|41614946|ref|NP_963444.1| - 5.7e-05 23.3 0.3 0.00017 21.8 0.3 1.7 1 1 0 1 1 1 1 Shikimate kinase AAA_16 PF13191.6 gi|41614946|ref|NP_963444.1| - 0.00039 20.9 0.0 0.0007 20.0 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|41614946|ref|NP_963444.1| - 0.00059 19.9 0.2 0.0014 18.7 0.2 1.6 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|41614946|ref|NP_963444.1| - 0.0018 18.2 0.4 0.0018 18.2 0.4 2.0 2 1 0 2 2 2 1 NTPase AAA_19 PF13245.6 gi|41614946|ref|NP_963444.1| - 0.004 17.5 0.2 0.0078 16.6 0.2 1.5 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|41614946|ref|NP_963444.1| - 0.0051 16.4 1.1 0.072 12.6 1.1 2.3 1 1 0 1 1 1 1 P-loop containing dynein motor region Viral_helicase1 PF01443.18 gi|41614946|ref|NP_963444.1| - 0.0064 16.3 0.0 0.0081 15.9 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 gi|41614946|ref|NP_963444.1| - 0.0068 16.7 0.1 0.014 15.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|41614946|ref|NP_963444.1| - 0.01 15.6 0.1 0.015 15.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|41614946|ref|NP_963444.1| - 0.019 14.2 0.2 0.032 13.4 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain DUF2075 PF09848.9 gi|41614946|ref|NP_963444.1| - 0.022 14.0 0.0 0.034 13.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ADK PF00406.22 gi|41614946|ref|NP_963444.1| - 0.028 14.5 0.2 0.12 12.5 0.2 2.2 1 1 0 1 1 1 0 Adenylate kinase AAA_30 PF13604.6 gi|41614946|ref|NP_963444.1| - 0.033 13.9 0.1 0.054 13.2 0.1 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|41614946|ref|NP_963444.1| - 0.045 13.8 0.4 0.14 12.3 0.4 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase KTI12 PF08433.10 gi|41614946|ref|NP_963444.1| - 0.052 13.0 0.3 0.093 12.2 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 MeaB PF03308.16 gi|41614946|ref|NP_963444.1| - 0.072 12.1 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 gi|41614946|ref|NP_963444.1| - 0.078 13.0 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|41614946|ref|NP_963444.1| - 0.087 12.4 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Med26_C PF15693.5 gi|41614946|ref|NP_963444.1| - 0.096 12.8 0.0 0.21 11.7 0.0 1.5 2 0 0 2 2 2 0 Mediator complex subunit 26 C-terminal ATPase_2 PF01637.18 gi|41614946|ref|NP_963444.1| - 0.35 10.7 5.2 0.85 9.5 5.2 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea DUF4131 PF13567.6 gi|41614947|ref|NP_963445.1| - 0.025 14.3 0.3 0.027 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SecE PF00584.20 gi|41614947|ref|NP_963445.1| - 0.57 10.1 5.8 23 5.0 1.0 3.0 3 0 0 3 3 3 0 SecE/Sec61-gamma subunits of protein translocation complex DUF308 PF03729.13 gi|41614947|ref|NP_963445.1| - 2.2 8.7 9.0 1.9 8.9 3.9 2.5 2 1 1 3 3 3 0 Short repeat of unknown function (DUF308) tRNA_NucTransf2 PF09249.11 gi|41614948|ref|NP_963446.1| - 4.4e-32 110.7 0.1 9e-32 109.7 0.1 1.5 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|41614948|ref|NP_963446.1| - 3.1e-08 33.8 0.1 1.1e-07 32.0 0.1 2.2 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|41614948|ref|NP_963446.1| - 2.2e-05 24.5 0.2 0.00025 21.0 0.0 2.8 2 1 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|41614948|ref|NP_963446.1| - 0.091 13.0 0.0 0.55 10.5 0.0 2.1 2 0 0 2 2 2 0 DNA polymerase beta palm DUF16 PF01519.16 gi|41614949|ref|NP_963447.1| - 0.7 10.4 7.2 0.78 10.3 3.4 2.0 2 0 0 2 2 2 0 Protein of unknown function DUF16 Osmo_CC PF08946.10 gi|41614949|ref|NP_963447.1| - 0.8 10.0 7.1 0.53 10.6 4.9 1.8 2 0 0 2 2 2 0 Osmosensory transporter coiled coil YtpI PF14007.6 gi|41614950|ref|NP_963448.1| - 0.11 12.6 0.3 0.11 12.6 0.3 2.9 3 1 0 3 3 3 0 YtpI-like protein RNA_pol_Rpb2_6 PF00562.28 gi|41614952|ref|NP_963450.1| - 3.1e-115 385.4 0.0 3.7e-115 385.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|41614952|ref|NP_963450.1| - 6.2e-23 81.0 0.0 1.1e-22 80.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|41614952|ref|NP_963450.1| - 1.2e-21 76.7 0.1 2.8e-21 75.5 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|41614952|ref|NP_963450.1| - 1.4e-11 44.8 1.8 4.5e-11 43.1 1.8 1.9 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Auto_anti-p27 PF06677.12 gi|41614952|ref|NP_963450.1| - 0.0048 17.0 1.5 0.0086 16.2 1.5 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) OrfB_Zn_ribbon PF07282.11 gi|41614952|ref|NP_963450.1| - 0.22 11.5 1.5 0.41 10.6 1.5 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|41614952|ref|NP_963450.1| - 0.97 9.0 3.4 3 7.5 3.4 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|41614952|ref|NP_963450.1| - 6.7 6.6 6.2 76 3.2 0.5 2.2 1 1 1 2 2 2 0 zinc-ribbon domain NOG1_N PF17835.1 gi|41614953|ref|NP_963451.1| - 4.3e-28 98.3 2.9 8.1e-28 97.4 2.9 1.5 1 0 0 1 1 1 1 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|41614953|ref|NP_963451.1| - 2.5e-22 79.1 0.2 5.6e-22 78.0 0.2 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|41614953|ref|NP_963451.1| - 1.2e-14 53.8 0.1 3e-14 52.5 0.1 1.8 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|41614953|ref|NP_963451.1| - 2.5e-13 49.8 0.2 4.1e-13 49.2 0.2 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|41614953|ref|NP_963451.1| - 0.00012 22.1 3.2 0.059 13.3 0.7 2.9 2 1 0 2 2 2 2 RsgA GTPase AIG1 PF04548.16 gi|41614953|ref|NP_963451.1| - 0.00022 20.6 0.0 0.00038 19.9 0.0 1.4 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.10 gi|41614953|ref|NP_963451.1| - 0.001 18.6 0.2 0.001 18.6 0.2 1.8 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit HHH_8 PF14716.6 gi|41614953|ref|NP_963451.1| - 0.0039 17.5 0.0 0.027 14.8 0.0 2.4 1 1 1 2 2 2 1 Helix-hairpin-helix domain Arf PF00025.21 gi|41614953|ref|NP_963451.1| - 0.01 15.3 0.3 0.066 12.7 0.1 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family cobW PF02492.19 gi|41614953|ref|NP_963451.1| - 0.042 13.4 0.2 8.2 6.0 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain WD-3 PF09765.9 gi|41614953|ref|NP_963451.1| - 0.05 12.9 0.0 0.076 12.3 0.0 1.2 1 0 0 1 1 1 0 WD-repeat region PBP_dimer PF03717.15 gi|41614953|ref|NP_963451.1| - 0.052 13.9 0.6 0.14 12.4 0.6 1.9 1 1 0 1 1 1 0 Penicillin-binding Protein dimerisation domain GTP_EFTU PF00009.27 gi|41614953|ref|NP_963451.1| - 0.067 12.7 0.1 5.9 6.4 0.0 2.8 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 gi|41614953|ref|NP_963451.1| - 0.084 13.4 0.0 0.2 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 gi|41614953|ref|NP_963451.1| - 0.14 12.2 3.7 4.7 7.2 0.2 3.1 2 1 1 3 3 3 0 Dynamin family ASCH PF04266.14 gi|41614954|ref|NP_963452.1| - 1.4e-17 64.2 0.1 2.2e-17 63.6 0.1 1.3 1 0 0 1 1 1 1 ASCH domain PBP PF01161.20 gi|41614955|ref|NP_963453.1| - 4.1e-21 75.7 0.1 5.2e-21 75.3 0.1 1.2 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein BTHB PF18410.1 gi|41614955|ref|NP_963453.1| - 0.051 13.4 0.6 1.9 8.4 0.1 2.3 2 0 0 2 2 2 0 Basic tilted helix bundle domain DUF4411 PF14367.6 gi|41614956|ref|NP_963454.1| - 0.039 13.9 0.0 0.073 13.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) AI-2E_transport PF01594.16 gi|41614957|ref|NP_963455.1| - 1.2e-39 136.4 49.3 1.6e-38 132.7 49.3 1.9 1 1 0 1 1 1 1 AI-2E family transporter Fst_toxin PF13955.6 gi|41614957|ref|NP_963455.1| - 0.0026 17.6 0.3 0.0026 17.6 0.3 2.6 2 0 0 2 2 2 1 Toxin Fst, type I toxin-antitoxin system HXXEE PF13787.6 gi|41614957|ref|NP_963455.1| - 0.023 15.5 4.9 0.023 15.5 4.9 2.8 2 2 0 2 2 2 0 Protein of unknown function with HXXEE motif Vma12 PF11712.8 gi|41614958|ref|NP_963456.1| - 2.8 8.0 5.0 2.7 8.1 5.0 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TMEM132D_C PF15706.5 gi|41614959|ref|NP_963457.1| - 0.13 12.0 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Na_Ca_ex PF01699.24 gi|41614960|ref|NP_963458.1| - 7.8e-06 25.9 36.7 0.002 18.1 10.1 2.8 2 1 0 2 2 2 2 Sodium/calcium exchanger protein SLATT_6 PF18169.1 gi|41614960|ref|NP_963458.1| - 2.8 7.5 9.2 0.61 9.7 2.2 2.5 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 GidB PF02527.15 gi|41614961|ref|NP_963459.1| - 4e-07 29.5 0.1 5.1e-07 29.2 0.1 1.4 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MTS PF05175.14 gi|41614961|ref|NP_963459.1| - 5.9e-07 29.2 0.0 8.4e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|41614961|ref|NP_963459.1| - 6e-06 26.1 0.0 1.7e-05 24.7 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|41614961|ref|NP_963459.1| - 0.00014 21.6 0.0 0.0002 21.1 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|41614961|ref|NP_963459.1| - 0.0014 18.1 0.2 0.002 17.6 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 gi|41614961|ref|NP_963459.1| - 0.0052 16.4 0.0 0.01 15.4 0.0 1.6 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_16 PF10294.9 gi|41614961|ref|NP_963459.1| - 0.0059 16.4 1.2 0.0072 16.1 0.2 1.6 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_25 PF13649.6 gi|41614961|ref|NP_963459.1| - 0.018 15.7 0.0 0.032 14.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF3937 PF13073.6 gi|41614961|ref|NP_963459.1| - 0.07 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Methyltransf_11 PF08241.12 gi|41614961|ref|NP_963459.1| - 0.21 12.3 0.0 0.35 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain ATP-synt_D PF01813.17 gi|41614962|ref|NP_963460.1| - 1.3e-39 136.1 15.8 1.6e-39 135.8 15.8 1.0 1 0 0 1 1 1 1 ATP synthase subunit D MID_pPIWI_RE PF18157.1 gi|41614962|ref|NP_963460.1| - 0.8 10.0 2.9 3.3 8.0 2.4 1.9 1 1 1 2 2 2 0 MID domain of pPIWI_RE SecY PF00344.20 gi|41614963|ref|NP_963461.1| - 5.7e-40 137.5 26.4 7.5e-40 137.1 26.4 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|41614963|ref|NP_963461.1| - 9.5e-05 22.2 0.6 9.5e-05 22.2 0.6 2.6 2 0 0 2 2 2 1 Plug domain of Sec61p MadM PF03818.13 gi|41614963|ref|NP_963461.1| - 0.033 14.0 0.0 0.033 14.0 0.0 4.8 5 1 0 5 5 5 0 Malonate/sodium symporter MadM subunit GMAP PF06540.11 gi|41614963|ref|NP_963461.1| - 0.16 12.0 0.3 0.98 9.5 0.0 2.1 2 0 0 2 2 2 0 Galanin message associated peptide (GMAP) Rep_fac_C PF08542.11 gi|41614964|ref|NP_963462.1| - 2.5e-19 69.4 2.0 3.2e-19 69.1 0.1 2.2 3 0 0 3 3 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|41614964|ref|NP_963462.1| - 2e-18 67.1 0.1 1.1e-17 64.7 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|41614964|ref|NP_963462.1| - 2.5e-14 53.4 0.5 3.9e-09 36.5 0.0 3.0 2 1 1 3 3 3 2 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|41614964|ref|NP_963462.1| - 9.7e-10 38.4 0.1 6.6e-08 32.5 0.0 2.8 3 1 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|41614964|ref|NP_963462.1| - 4.4e-08 33.2 0.3 2.2e-06 27.7 0.0 2.7 2 1 1 3 3 3 1 AAA domain Rad17 PF03215.15 gi|41614964|ref|NP_963462.1| - 5.4e-07 29.7 0.1 4.5e-06 26.7 0.0 2.4 2 1 1 3 3 3 1 Rad17 P-loop domain DNA_pol3_delta PF06144.13 gi|41614964|ref|NP_963462.1| - 2.1e-06 27.7 0.2 2.3e-05 24.3 0.1 2.3 2 1 0 2 2 2 1 DNA polymerase III, delta subunit Mg_chelatase PF01078.21 gi|41614964|ref|NP_963462.1| - 6e-06 25.8 0.0 0.0019 17.6 0.0 2.7 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|41614964|ref|NP_963462.1| - 1e-05 26.0 0.1 0.0041 17.5 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_assoc_2 PF16193.5 gi|41614964|ref|NP_963462.1| - 1.4e-05 25.4 0.2 4.8e-05 23.6 0.2 1.9 1 0 0 1 1 1 1 AAA C-terminal domain ResIII PF04851.15 gi|41614964|ref|NP_963462.1| - 1.4e-05 25.2 0.1 0.0005 20.1 0.0 2.5 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|41614964|ref|NP_963462.1| - 3.6e-05 24.0 0.2 0.0072 16.6 0.1 2.9 1 1 1 2 2 1 1 AAA domain AAA_3 PF07726.11 gi|41614964|ref|NP_963462.1| - 3.9e-05 23.5 0.0 7.5e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|41614964|ref|NP_963462.1| - 6e-05 22.8 0.0 0.0002 21.1 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|41614964|ref|NP_963462.1| - 7.7e-05 23.2 0.1 0.00095 19.7 0.0 2.6 2 2 1 3 3 2 1 AAA domain AAA_11 PF13086.6 gi|41614964|ref|NP_963462.1| - 0.00013 21.8 0.0 0.00016 21.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|41614964|ref|NP_963462.1| - 0.00023 21.2 0.2 0.0034 17.4 0.1 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|41614964|ref|NP_963462.1| - 0.00025 20.4 0.0 0.00063 19.1 0.0 1.7 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_24 PF13479.6 gi|41614964|ref|NP_963462.1| - 0.00027 20.7 0.0 0.00099 18.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|41614964|ref|NP_963462.1| - 0.00068 18.8 0.0 0.0022 17.1 0.0 1.8 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_25 PF13481.6 gi|41614964|ref|NP_963462.1| - 0.0012 18.4 0.1 0.003 17.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 gi|41614964|ref|NP_963462.1| - 0.0013 18.9 0.0 0.0068 16.5 0.0 2.2 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) Sigma54_activ_2 PF14532.6 gi|41614964|ref|NP_963462.1| - 0.0049 17.0 0.1 0.031 14.4 0.0 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|41614964|ref|NP_963462.1| - 0.0051 16.3 0.0 0.013 15.0 0.0 1.7 2 0 0 2 2 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|41614964|ref|NP_963462.1| - 0.0063 16.2 0.0 0.69 9.6 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_33 PF13671.6 gi|41614964|ref|NP_963462.1| - 0.01 16.0 0.4 0.086 13.0 0.2 2.4 2 1 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|41614964|ref|NP_963462.1| - 0.011 15.2 0.1 0.11 11.9 0.0 2.3 1 1 0 2 2 2 0 PhoH-like protein AAA_28 PF13521.6 gi|41614964|ref|NP_963462.1| - 0.013 15.8 0.0 0.067 13.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 gi|41614964|ref|NP_963462.1| - 0.015 14.4 0.0 0.045 12.9 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF815) AAA_30 PF13604.6 gi|41614964|ref|NP_963462.1| - 0.02 14.6 0.4 0.15 11.7 0.1 2.5 2 2 0 2 2 2 0 AAA domain SNF2_N PF00176.23 gi|41614964|ref|NP_963462.1| - 0.02 13.6 0.0 0.15 10.8 0.0 2.0 1 1 0 2 2 2 0 SNF2 family N-terminal domain DEAD PF00270.29 gi|41614964|ref|NP_963462.1| - 0.038 13.8 0.2 12 5.6 0.0 2.5 1 1 0 2 2 2 0 DEAD/DEAH box helicase Viral_helicase1 PF01443.18 gi|41614964|ref|NP_963462.1| - 0.039 13.7 0.0 0.062 13.0 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 gi|41614964|ref|NP_963462.1| - 0.042 14.3 0.4 0.11 13.0 0.0 1.8 1 1 1 2 2 2 0 AAA domain Torsin PF06309.11 gi|41614964|ref|NP_963462.1| - 0.049 13.7 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Torsin NTPase_1 PF03266.15 gi|41614964|ref|NP_963462.1| - 0.054 13.4 0.2 2.2 8.2 0.0 2.7 3 0 0 3 3 3 0 NTPase DUF2075 PF09848.9 gi|41614964|ref|NP_963462.1| - 0.067 12.4 0.0 0.27 10.4 0.0 1.8 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2075) FtsK_SpoIIIE PF01580.18 gi|41614964|ref|NP_963462.1| - 0.079 12.3 0.1 0.23 10.8 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family TniB PF05621.11 gi|41614964|ref|NP_963462.1| - 0.082 12.3 0.0 0.27 10.6 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein RNA_helicase PF00910.22 gi|41614964|ref|NP_963462.1| - 0.096 13.1 0.0 0.22 11.9 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Zeta_toxin PF06414.12 gi|41614964|ref|NP_963462.1| - 0.1 11.9 0.0 0.2 10.9 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin MeaB PF03308.16 gi|41614964|ref|NP_963462.1| - 0.13 11.2 0.1 0.62 9.0 0.1 2.0 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|41614964|ref|NP_963462.1| - 0.15 12.4 1.2 0.97 9.8 1.2 2.5 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|41614965|ref|NP_963463.1| - 2.2e-48 164.7 0.0 3.4e-48 164.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 gi|41614965|ref|NP_963463.1| - 0.052 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_29 PF13555.6 gi|41614965|ref|NP_963463.1| - 0.11 12.2 0.1 0.23 11.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|41614965|ref|NP_963463.1| - 1.2 9.6 3.5 0.76 10.2 0.1 2.1 2 0 0 2 2 2 0 AAA domain Glycos_transf_2 PF00535.26 gi|41614967|ref|NP_963465.1| - 3e-22 79.2 0.0 4.5e-22 78.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|41614967|ref|NP_963465.1| - 5.9e-12 46.0 0.0 9.6e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|41614967|ref|NP_963465.1| - 1.9e-11 43.9 0.1 4.3e-11 42.8 0.1 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_49 PF13896.6 gi|41614967|ref|NP_963465.1| - 0.017 14.5 0.0 0.083 12.2 0.0 1.7 1 1 0 2 2 2 0 Glycosyl-transferase for dystroglycan Glyco_transf_21 PF13506.6 gi|41614967|ref|NP_963465.1| - 0.052 13.0 0.0 0.087 12.3 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 AbrB_C PF18277.1 gi|41614967|ref|NP_963465.1| - 0.19 11.4 0.1 0.49 10.1 0.0 1.7 2 0 0 2 2 2 0 AbrB C-terminal domain RNA_pol_Rpb2_1 PF04563.15 gi|41614968|ref|NP_963466.1| - 7.6e-42 143.1 0.1 1e-41 142.7 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 gi|41614968|ref|NP_963466.1| - 5.1e-19 68.2 0.0 1.5e-18 66.7 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.14 gi|41614968|ref|NP_963466.1| - 2.7e-15 56.5 4.6 4.5e-15 55.8 1.6 2.4 2 1 0 2 2 2 1 RNA polymerase Rpb2, domain 2 FtsX PF02687.21 gi|41614969|ref|NP_963467.1| - 1.9e-14 53.9 11.5 1.9e-14 53.9 11.5 3.1 3 0 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 gi|41614969|ref|NP_963467.1| - 2e-14 54.4 0.0 2e-14 54.4 0.0 3.1 4 0 0 4 4 4 1 MacB-like periplasmic core domain DUF4395 PF14340.6 gi|41614969|ref|NP_963467.1| - 0.32 11.3 4.4 0.81 10.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4395) ATPase PF06745.13 gi|41614970|ref|NP_963468.1| - 1.2e-80 270.2 0.0 1.4e-80 270.0 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|41614970|ref|NP_963468.1| - 0.00021 20.0 0.0 0.00054 18.7 0.0 1.6 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|41614970|ref|NP_963468.1| - 0.0011 18.6 0.0 0.0015 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|41614970|ref|NP_963468.1| - 0.0045 16.3 0.0 0.011 15.0 0.0 1.6 2 0 0 2 2 2 1 Rad51 PPV_E1_C PF00519.17 gi|41614970|ref|NP_963468.1| - 0.04 12.8 0.0 0.058 12.2 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_19 PF13245.6 gi|41614970|ref|NP_963468.1| - 0.095 13.0 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain MEDS PF14417.6 gi|41614970|ref|NP_963468.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_7 PF12775.7 gi|41614970|ref|NP_963468.1| - 0.12 11.9 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 gi|41614970|ref|NP_963468.1| - 0.14 11.2 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein DAP3 PF10236.9 gi|41614970|ref|NP_963468.1| - 0.14 11.3 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 DUF2075 PF09848.9 gi|41614970|ref|NP_963468.1| - 0.26 10.5 0.0 0.34 10.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Ribosomal_S27 PF01599.19 gi|41614971|ref|NP_963469.1| - 2.2e-18 66.2 6.0 2.8e-18 65.8 6.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S27a TackOD1 PF18551.1 gi|41614971|ref|NP_963469.1| - 0.00017 21.3 0.2 0.00021 21.1 0.2 1.0 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 Zn-ribbon_8 PF09723.10 gi|41614971|ref|NP_963469.1| - 0.0014 18.7 0.5 0.46 10.7 0.0 2.2 2 0 0 2 2 2 2 Zinc ribbon domain DZR PF12773.7 gi|41614971|ref|NP_963469.1| - 0.0018 18.3 0.5 0.0022 18.0 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon PriA_CRR PF18319.1 gi|41614971|ref|NP_963469.1| - 0.003 17.5 2.0 0.0058 16.6 2.0 1.5 1 1 0 1 1 1 1 PriA DNA helicase Cys-rich region (CRR) domain RNA_POL_M_15KD PF02150.16 gi|41614971|ref|NP_963469.1| - 0.0033 17.3 1.2 0.0053 16.6 1.2 1.4 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit Ribosomal_L37e PF01907.19 gi|41614971|ref|NP_963469.1| - 0.0056 16.8 3.0 0.0078 16.4 3.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e zinc-ribbons_6 PF07191.12 gi|41614971|ref|NP_963469.1| - 0.0057 16.6 0.7 0.0068 16.4 0.7 1.2 1 0 0 1 1 1 1 zinc-ribbons OrfB_Zn_ribbon PF07282.11 gi|41614971|ref|NP_963469.1| - 0.009 15.9 3.4 0.013 15.5 3.4 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.19 gi|41614971|ref|NP_963469.1| - 0.016 15.2 0.3 0.019 15.0 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YhfH PF14149.6 gi|41614971|ref|NP_963469.1| - 0.018 15.0 4.2 0.059 13.4 4.3 1.7 1 1 1 2 2 2 0 YhfH-like protein Nudix_N_2 PF14803.6 gi|41614971|ref|NP_963469.1| - 0.049 13.6 6.9 3.9 7.5 6.9 2.2 1 1 1 2 2 2 0 Nudix N-terminal Rubredoxin_2 PF18073.1 gi|41614971|ref|NP_963469.1| - 0.071 12.8 4.6 1.6 8.5 1.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Zn_Tnp_IS1595 PF12760.7 gi|41614971|ref|NP_963469.1| - 0.087 12.8 7.3 0.085 12.8 6.2 1.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|41614971|ref|NP_963469.1| - 0.14 11.9 4.4 0.87 9.3 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_UBZ PF18439.1 gi|41614971|ref|NP_963469.1| - 0.14 11.8 0.5 0.14 11.8 0.5 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_2 PF13240.6 gi|41614971|ref|NP_963469.1| - 0.15 11.8 4.7 3.1 7.7 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain FdhE PF04216.12 gi|41614971|ref|NP_963469.1| - 0.23 11.3 2.7 0.44 10.4 2.7 1.5 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-ribbon_3 PF13248.6 gi|41614971|ref|NP_963469.1| - 0.27 10.7 7.1 1.4 8.5 7.1 1.9 1 1 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|41614971|ref|NP_963469.1| - 0.42 10.4 3.8 3.7 7.4 3.8 2.1 1 1 0 1 1 1 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|41614971|ref|NP_963469.1| - 1.1 8.8 4.8 5.9 6.5 4.8 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding tRNA-Thr_ED PF08915.11 gi|41614972|ref|NP_963470.1| - 1.2e-43 148.4 0.8 3.6e-43 146.9 0.8 1.9 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|41614972|ref|NP_963470.1| - 4.4e-24 84.4 2.7 4.4e-24 84.4 2.7 2.3 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|41614972|ref|NP_963470.1| - 1.3e-16 61.1 1.0 1.5e-14 54.3 0.2 2.3 2 0 0 2 2 2 2 tRNA synthetase class II core domain (G, H, P, S and T) Herpes_heli_pri PF05774.11 gi|41614972|ref|NP_963470.1| - 0.098 12.9 0.7 1.6 9.0 0.0 2.7 3 0 0 3 3 3 0 Herpesvirus helicase-primase complex component INT_SG_DDX_CT_C PF15300.6 gi|41614972|ref|NP_963470.1| - 0.42 10.4 2.5 1.3 8.9 0.1 2.9 3 0 0 3 3 3 0 INTS6/SAGE1/DDX26B/CT45 C-terminus Sulfakinin PF08257.11 gi|41614972|ref|NP_963470.1| - 2.1 8.7 6.4 0.23 11.6 0.9 2.5 2 0 0 2 2 2 0 Sulfakinin family KOW PF00467.29 gi|41614973|ref|NP_963471.1| - 0.00042 20.2 5.1 0.00042 20.2 5.1 1.7 2 0 0 2 2 2 1 KOW motif Ribosomal_L14e PF01929.17 gi|41614973|ref|NP_963471.1| - 0.0012 19.3 0.1 0.0025 18.3 0.1 1.5 1 1 0 1 1 1 1 Ribosomal protein L14 Ribosomal_L7Ae PF01248.26 gi|41614974|ref|NP_963472.1| - 2.5e-14 52.7 0.3 3e-14 52.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DUF1356 PF07092.12 gi|41614974|ref|NP_963472.1| - 0.082 12.2 0.0 0.083 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) KH_5 PF13184.6 gi|41614975|ref|NP_963473.1| - 5.7e-09 35.9 0.3 1.7e-07 31.2 0.1 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_2 PF07650.17 gi|41614975|ref|NP_963473.1| - 3.6e-07 29.9 1.3 0.015 15.1 0.1 2.1 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|41614975|ref|NP_963473.1| - 0.00075 19.3 0.3 0.048 13.5 0.1 2.2 2 0 0 2 2 2 1 KH domain KH_1 PF00013.29 gi|41614975|ref|NP_963473.1| - 0.018 14.9 1.1 0.095 12.5 0.2 2.2 1 1 1 2 2 2 0 KH domain RNA_pol_L_2 PF13656.6 gi|41614976|ref|NP_963474.1| - 2e-17 62.7 0.1 2.6e-17 62.3 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|41614976|ref|NP_963474.1| - 1.1e-10 40.8 0.0 1.8e-10 40.1 0.0 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SseB_C PF14581.6 gi|41614976|ref|NP_963474.1| - 0.058 13.5 0.0 0.092 12.8 0.0 1.4 1 1 0 1 1 1 0 SseB protein C-terminal domain DREV PF05219.12 gi|41614976|ref|NP_963474.1| - 0.066 12.3 0.0 0.088 11.9 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase Ribosomal_L15e PF00827.17 gi|41614977|ref|NP_963475.1| - 1.5e-70 236.8 2.3 1.7e-70 236.7 2.3 1.0 1 0 0 1 1 1 1 Ribosomal L15 Ribosomal_L44 PF00935.19 gi|41614978|ref|NP_963476.1| - 6e-24 84.3 4.3 7.7e-24 84.0 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|41614978|ref|NP_963476.1| - 0.00017 22.0 3.5 0.0065 16.9 1.0 2.4 2 0 0 2 2 2 2 Ribosomal protein L33 NOB1_Zn_bind PF08772.11 gi|41614978|ref|NP_963476.1| - 0.018 15.2 1.0 0.6 10.3 0.1 2.2 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 gi|41614978|ref|NP_963476.1| - 0.13 11.7 1.2 3.8 7.1 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|41614978|ref|NP_963476.1| - 0.67 9.7 4.5 10 6.0 0.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain KH_1 PF00013.29 gi|41614979|ref|NP_963477.1| - 9e-10 38.2 3.9 9e-10 38.2 3.9 2.2 2 0 0 2 2 2 1 KH domain KH_6 PF15985.5 gi|41614979|ref|NP_963477.1| - 1.6e-06 28.4 0.4 2.7e-06 27.6 0.4 1.4 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|41614979|ref|NP_963477.1| - 0.0001 22.0 6.7 0.00027 20.7 6.6 1.9 1 1 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|41614979|ref|NP_963477.1| - 0.0057 16.5 0.3 0.017 15.0 0.2 1.9 1 1 0 1 1 1 1 KH domain SLS PF14611.6 gi|41614979|ref|NP_963477.1| - 0.024 14.5 0.2 0.034 14.0 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator S1 PF00575.23 gi|41614979|ref|NP_963477.1| - 0.038 14.3 2.0 0.49 10.8 0.0 3.3 3 0 0 3 3 3 0 S1 RNA binding domain CHASE9 PF17153.4 gi|41614979|ref|NP_963477.1| - 0.12 12.5 1.0 0.4 10.8 0.0 2.1 2 0 0 2 2 2 0 Periplasmic sensor domain, extracellular GatB_N PF02934.15 gi|41614980|ref|NP_963478.1| - 3.9e-91 305.2 0.0 5.9e-91 304.6 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|41614980|ref|NP_963478.1| - 8.6e-18 64.6 3.2 2.1e-17 63.4 3.2 1.6 1 0 0 1 1 1 1 GatB domain DUF4974 PF16344.5 gi|41614980|ref|NP_963478.1| - 0.076 13.0 0.6 1.8 8.6 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) AAA PF00004.29 gi|41614981|ref|NP_963479.1| - 1.4e-43 148.5 0.0 8.3e-43 146.0 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|41614981|ref|NP_963479.1| - 2.9e-14 52.6 0.1 6.3e-14 51.5 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|41614981|ref|NP_963479.1| - 1.6e-07 31.6 0.0 4.5e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|41614981|ref|NP_963479.1| - 3.5e-06 27.0 0.0 1.3e-05 25.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|41614981|ref|NP_963479.1| - 3.9e-06 27.4 0.3 0.00053 20.4 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|41614981|ref|NP_963479.1| - 0.00011 22.0 0.0 0.00053 19.8 0.0 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|41614981|ref|NP_963479.1| - 0.00021 20.6 0.2 0.0057 15.9 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_18 PF13238.6 gi|41614981|ref|NP_963479.1| - 0.00022 21.8 0.0 0.00072 20.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_22 PF13401.6 gi|41614981|ref|NP_963479.1| - 0.00057 20.2 0.9 0.036 14.3 0.1 2.8 2 1 1 3 3 2 1 AAA domain ATPase PF06745.13 gi|41614981|ref|NP_963479.1| - 0.0038 16.6 1.8 0.032 13.6 0.4 2.7 1 1 0 2 2 2 1 KaiC AAA_14 PF13173.6 gi|41614981|ref|NP_963479.1| - 0.0055 16.7 0.0 0.015 15.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|41614981|ref|NP_963479.1| - 0.012 15.4 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|41614981|ref|NP_963479.1| - 0.012 15.8 0.0 0.029 14.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|41614981|ref|NP_963479.1| - 0.018 14.2 0.0 0.032 13.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 gi|41614981|ref|NP_963479.1| - 0.021 14.3 0.0 0.052 13.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_17 PF13207.6 gi|41614981|ref|NP_963479.1| - 0.031 14.7 0.6 0.22 11.9 0.0 2.6 3 0 0 3 3 2 0 AAA domain Prot_ATP_ID_OB PF16450.5 gi|41614981|ref|NP_963479.1| - 0.033 14.1 0.0 0.11 12.5 0.0 1.8 1 0 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain RNA_helicase PF00910.22 gi|41614981|ref|NP_963479.1| - 0.034 14.5 0.0 0.082 13.3 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 gi|41614981|ref|NP_963479.1| - 0.047 13.1 0.1 0.1 12.0 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|41614981|ref|NP_963479.1| - 0.053 13.2 0.1 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain SKI PF01202.22 gi|41614981|ref|NP_963479.1| - 0.15 12.2 1.0 0.46 10.6 0.2 2.1 2 1 0 3 3 3 0 Shikimate kinase Prot_ATP_OB_N PF17758.1 gi|41614981|ref|NP_963479.1| - 0.17 11.5 0.0 0.48 10.1 0.0 1.7 1 0 0 1 1 1 0 Proteasomal ATPase OB N-terminal domain Nuc_deoxyrib_tr PF05014.15 gi|41614981|ref|NP_963479.1| - 0.18 11.8 0.0 0.48 10.4 0.0 1.7 2 0 0 2 2 2 0 Nucleoside 2-deoxyribosyltransferase AAA_30 PF13604.6 gi|41614981|ref|NP_963479.1| - 0.22 11.2 0.2 0.4 10.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain RILP PF11461.8 gi|41614981|ref|NP_963479.1| - 0.62 10.3 3.3 1.4 9.2 3.3 1.6 1 0 0 1 1 1 0 Rab interacting lysosomal protein PIN PF01850.21 gi|41614982|ref|NP_963480.1| - 5.2e-05 23.7 0.7 5.8e-05 23.6 0.7 1.2 1 0 0 1 1 1 1 PIN domain Ribosomal_S19e PF01090.19 gi|161511236|ref|NP_963481.2| - 5.3e-48 162.2 0.2 6e-48 162.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 gi|161511236|ref|NP_963481.2| - 0.0053 16.7 0.9 0.0096 15.8 0.9 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_45 PF14947.6 gi|161511236|ref|NP_963481.2| - 0.0086 16.0 0.0 0.017 15.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_N PF14338.6 gi|161511236|ref|NP_963481.2| - 0.055 13.6 0.5 0.13 12.4 0.2 1.8 2 0 0 2 2 2 0 Mrr N-terminal domain Aminotran_4 PF01063.19 gi|41614984|ref|NP_963482.1| - 1.4e-45 155.9 0.0 1.6e-45 155.7 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV DUF21 PF01595.20 gi|41614985|ref|NP_963483.1| - 3.2e-30 105.1 6.3 5.5e-30 104.4 6.3 1.4 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|41614985|ref|NP_963483.1| - 7.1e-19 67.6 0.0 1.3e-18 66.7 0.0 1.5 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|41614985|ref|NP_963483.1| - 4.6e-05 23.8 1.9 0.0009 19.6 0.2 3.2 2 1 1 3 3 3 1 CBS domain DUF1673 PF07895.11 gi|41614985|ref|NP_963483.1| - 3.8 7.2 9.9 5.7 6.6 9.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) AhpC-TSA PF00578.21 gi|41614986|ref|NP_963484.1| - 1.6e-31 108.8 0.0 3.3e-31 107.8 0.0 1.5 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 gi|41614986|ref|NP_963484.1| - 3.1e-14 52.9 0.0 4.3e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|41614986|ref|NP_963484.1| - 2.2e-11 43.4 0.0 3.9e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin AhpC-TSA_2 PF13911.6 gi|41614986|ref|NP_963484.1| - 0.042 14.0 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme PDT PF00800.18 gi|41614988|ref|NP_963486.1| - 2.5e-52 177.4 0.4 5.3e-52 176.3 0.2 1.7 2 0 0 2 2 2 1 Prephenate dehydratase PDH PF02153.17 gi|41614988|ref|NP_963486.1| - 3.9e-10 39.2 0.0 1.7e-09 37.1 0.0 2.1 2 1 0 2 2 2 1 Prephenate dehydrogenase ACT PF01842.25 gi|41614988|ref|NP_963486.1| - 1.4e-09 37.5 0.0 3.4e-09 36.3 0.0 1.7 1 0 0 1 1 1 1 ACT domain CM_2 PF01817.21 gi|41614988|ref|NP_963486.1| - 1.7e-07 31.4 5.8 1.7e-07 31.4 5.8 2.7 3 0 0 3 3 3 1 Chorismate mutase type II Sacchrp_dh_NADP PF03435.18 gi|41614988|ref|NP_963486.1| - 0.00043 20.5 0.0 0.0017 18.6 0.0 2.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|41614988|ref|NP_963486.1| - 0.0018 17.6 0.0 0.0054 16.1 0.0 1.7 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|41614988|ref|NP_963486.1| - 0.0025 18.0 0.1 0.021 15.1 0.0 2.6 2 0 0 2 2 2 1 TrkA-N domain DUF3834 PF12916.7 gi|41614988|ref|NP_963486.1| - 0.0071 15.6 0.6 0.13 11.5 0.2 2.8 1 1 1 2 2 2 1 Protein of unknown function (DUF3834) ApbA PF02558.16 gi|41614988|ref|NP_963486.1| - 0.012 15.3 0.0 0.032 13.9 0.0 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Glyco_hydro_25 PF01183.20 gi|41614988|ref|NP_963486.1| - 0.015 15.5 0.1 0.043 14.0 0.1 1.7 1 0 0 1 1 1 0 Glycosyl hydrolases family 25 LpxI_N PF17930.1 gi|41614988|ref|NP_963486.1| - 0.022 14.6 0.0 0.36 10.7 0.0 2.7 3 0 0 3 3 3 0 LpxI N-terminal domain F420_oxidored PF03807.17 gi|41614988|ref|NP_963486.1| - 0.052 14.1 0.1 4.6 7.9 0.0 3.2 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|41614988|ref|NP_963486.1| - 0.061 13.5 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 gi|41614988|ref|NP_963486.1| - 0.083 13.0 0.2 0.91 9.6 0.0 2.5 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase COMP PF11598.8 gi|41614988|ref|NP_963486.1| - 0.083 13.4 0.3 0.23 11.9 0.3 1.8 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Semialdhyde_dh PF01118.24 gi|41614988|ref|NP_963486.1| - 0.084 13.3 0.0 0.29 11.6 0.0 1.9 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|41614988|ref|NP_963486.1| - 0.12 12.9 0.0 0.52 10.8 0.0 2.1 1 0 0 1 1 1 0 Putative NAD(P)-binding Glycos_transf_1 PF00534.20 gi|41614989|ref|NP_963487.1| - 3.8e-26 91.7 1.1 6.5e-26 90.9 0.7 1.5 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|41614989|ref|NP_963487.1| - 2.3e-11 44.2 0.0 3.7e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|41614989|ref|NP_963487.1| - 0.00017 21.6 0.0 0.00027 21.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|41614989|ref|NP_963487.1| - 0.017 15.5 0.0 0.046 14.1 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferases group 1 ALG11_N PF15924.5 gi|41614989|ref|NP_963487.1| - 0.13 12.3 3.2 1.5 8.9 0.0 3.2 2 1 1 3 3 3 0 ALG11 mannosyltransferase N-terminus DUF2208 PF09973.9 gi|41614990|ref|NP_963488.1| - 0.23 11.0 6.6 0.36 10.4 6.6 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF4162 PF13732.6 gi|41614991|ref|NP_963489.1| - 0.0048 17.6 0.1 0.0056 17.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) MMM1 PF10296.9 gi|41614991|ref|NP_963489.1| - 0.016 14.3 0.2 0.02 13.9 0.2 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 YdjM PF04307.14 gi|41614992|ref|NP_963490.1| - 0.0087 15.4 3.3 0.013 14.9 3.3 1.3 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase MS_channel PF00924.18 gi|41614993|ref|NP_963491.1| - 6.8e-66 221.7 2.7 6.8e-66 221.7 2.7 2.2 3 0 0 3 3 3 1 Mechanosensitive ion channel DUF520 PF04461.13 gi|41614993|ref|NP_963491.1| - 0.057 13.5 0.3 0.28 11.3 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF520) tRNA_anti-codon PF01336.25 gi|41614994|ref|NP_963492.1| - 4.4e-12 45.8 0.5 2.8e-08 33.6 0.1 2.9 3 1 0 3 3 3 2 OB-fold nucleic acid binding domain DUF2240 PF09999.9 gi|41614994|ref|NP_963492.1| - 6.7e-05 22.5 0.1 0.00012 21.8 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) HU-CCDC81_bac_2 PF18175.1 gi|41614994|ref|NP_963492.1| - 0.045 13.6 0.3 0.14 12.0 0.3 1.8 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 Bac_DNA_binding PF00216.21 gi|41614994|ref|NP_963492.1| - 0.047 13.9 0.9 0.047 13.9 0.9 2.2 3 0 0 3 3 3 0 Bacterial DNA-binding protein UPF0180 PF03698.13 gi|41614994|ref|NP_963492.1| - 0.19 11.9 1.9 0.33 11.2 0.4 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) DUF4889 PF16230.5 gi|41614994|ref|NP_963492.1| - 8.2 6.7 7.0 3.3 8.0 0.6 3.0 3 1 0 3 3 3 0 Domain of unknown function (DUF4889) Ribosomal_60s PF00428.19 gi|41614996|ref|NP_963494.1| - 3.2e-18 66.1 15.0 3.7e-18 65.9 15.0 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Paralemmin PF03285.15 gi|41614996|ref|NP_963494.1| - 0.0008 19.1 2.8 0.00098 18.8 2.8 1.0 1 0 0 1 1 1 1 Paralemmin TetR_C_31 PF17940.1 gi|41614996|ref|NP_963494.1| - 0.0039 17.4 0.1 0.0051 17.0 0.1 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Methyltrans_RNA PF04452.14 gi|41614996|ref|NP_963494.1| - 0.02 14.2 1.6 0.022 14.1 1.6 1.0 1 0 0 1 1 1 0 RNA methyltransferase TAFII28 PF04719.14 gi|41614996|ref|NP_963494.1| - 0.096 12.8 2.2 0.12 12.5 2.2 1.2 1 0 0 1 1 1 0 hTAFII28-like protein conserved region YqzE PF14038.6 gi|41614996|ref|NP_963494.1| - 0.26 11.3 2.2 0.4 10.7 2.2 1.3 1 0 0 1 1 1 0 YqzE-like protein DUF4366 PF14283.6 gi|41614996|ref|NP_963494.1| - 0.58 10.2 5.8 0.65 10.0 5.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4366) PhetRS_B1 PF18262.1 gi|41614996|ref|NP_963494.1| - 0.86 9.9 5.1 8.7 6.7 5.1 2.3 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain Ribosomal_L22 PF00237.19 gi|41614997|ref|NP_963495.1| - 5.3e-15 55.5 0.2 7.3e-15 55.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e DUF4495 PF14906.6 gi|41614997|ref|NP_963495.1| - 0.05 12.7 0.0 0.075 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) Proteasome PF00227.26 gi|41614998|ref|NP_963496.1| - 1.2e-44 152.1 0.1 1.3e-44 151.9 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit tRNA_int_endo PF01974.17 gi|41614999|ref|NP_963497.1| - 5.9e-27 93.6 1.1 1.2e-26 92.6 0.4 1.7 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|41614999|ref|NP_963497.1| - 5.8e-08 32.3 1.8 1.3e-06 27.9 2.2 2.3 1 1 1 2 2 2 2 tRNA intron endonuclease, N-terminal domain RNA_pol_Rpb6 PF01192.22 gi|298205310|ref|YP_003717788.1| - 4.9e-10 39.2 0.7 6.5e-10 38.8 0.7 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 PUA PF01472.20 gi|41615000|ref|NP_963498.1| - 1.7e-19 69.6 0.0 2.5e-19 69.0 0.0 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|41615000|ref|NP_963498.1| - 3.8e-08 33.5 0.1 7.3e-08 32.6 0.1 1.5 1 0 0 1 1 1 1 UPF0113 PUA domain DUF1947 PF09183.10 gi|41615000|ref|NP_963498.1| - 1.3e-06 28.6 5.8 3e-06 27.4 5.8 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) YvbH_ext PF11724.8 gi|41615000|ref|NP_963498.1| - 0.09 13.1 0.7 0.22 11.9 0.7 1.6 1 0 0 1 1 1 0 YvbH-like oligomerisation region SH3_1 PF00018.28 gi|41615000|ref|NP_963498.1| - 0.2 11.3 1.3 0.33 10.6 0.2 1.9 2 0 0 2 2 2 0 SH3 domain tRNA-synt_1d PF00750.19 gi|41615001|ref|NP_963499.1| - 5.4e-73 245.9 2.8 1.4e-71 241.3 2.8 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|41615001|ref|NP_963499.1| - 6.8e-24 84.3 0.3 6.8e-24 84.3 0.3 2.2 2 0 0 2 2 2 1 DALR anticodon binding domain RAP PF08373.10 gi|41615001|ref|NP_963499.1| - 0.017 15.2 0.4 0.063 13.4 0.4 2.0 1 0 0 1 1 1 0 RAP domain DALR_2 PF09190.11 gi|41615001|ref|NP_963499.1| - 0.049 14.1 0.0 3.4 8.2 0.0 2.7 2 0 0 2 2 2 0 DALR domain FeoA PF04023.14 gi|41615001|ref|NP_963499.1| - 0.2 12.0 0.0 0.39 11.0 0.0 1.4 1 0 0 1 1 1 0 FeoA domain Ribosomal_L13 PF00572.18 gi|41615002|ref|NP_963500.1| - 7.9e-09 35.8 1.1 1.5e-06 28.5 1.1 2.6 1 1 0 1 1 1 1 Ribosomal protein L13 PaaA_PaaC PF05138.12 gi|41615003|ref|NP_963501.1| - 0.013 14.6 2.4 0.026 13.7 1.6 1.9 2 0 0 2 2 2 0 Phenylacetic acid catabolic protein AP_endonuc_2 PF01261.24 gi|41615003|ref|NP_963501.1| - 0.026 13.9 0.2 0.82 9.1 0.0 3.3 2 1 2 4 4 4 0 Xylose isomerase-like TIM barrel SseC PF04888.12 gi|41615003|ref|NP_963501.1| - 0.037 13.6 0.3 0.35 10.4 0.0 2.6 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family HEPN_Apea PF18739.1 gi|41615003|ref|NP_963501.1| - 0.064 13.7 0.1 0.064 13.7 0.1 4.2 3 1 0 3 3 3 0 Apea-like HEPN Allexi_40kDa PF05549.11 gi|41615003|ref|NP_963501.1| - 0.67 9.4 5.1 4.6 6.7 5.2 2.3 2 0 0 2 2 2 0 Allexivirus 40kDa protein Nas2_N PF18265.1 gi|41615003|ref|NP_963501.1| - 0.73 9.8 6.0 32 4.5 0.3 4.3 3 0 0 3 3 3 0 Nas2 N_terminal domain Exonuc_VII_L PF02601.15 gi|41615003|ref|NP_963501.1| - 3.3 7.2 23.0 24 4.4 0.0 2.9 2 1 0 2 2 2 0 Exonuclease VII, large subunit Cob_adeno_trans PF01923.18 gi|41615003|ref|NP_963501.1| - 4.9 7.3 5.7 7 6.8 3.1 2.6 2 0 0 2 2 2 0 Cobalamin adenosyltransferase tRNA-synt_2b PF00587.25 gi|41615004|ref|NP_963502.1| - 7.4e-22 78.2 0.0 1.9e-21 76.8 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) ProRS-C_1 PF09180.11 gi|41615004|ref|NP_963502.1| - 2.5e-18 66.1 1.8 6.8e-18 64.7 1.8 1.8 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal HGTP_anticodon PF03129.20 gi|41615004|ref|NP_963502.1| - 6.1e-18 64.8 0.5 2e-17 63.1 0.5 1.9 1 0 0 1 1 1 1 Anticodon binding domain CID_GANP PF16766.5 gi|41615004|ref|NP_963502.1| - 0.034 14.3 0.7 0.064 13.5 0.7 1.4 1 0 0 1 1 1 0 Binding region of GANP to ENY2 YyzF PF14116.6 gi|41615004|ref|NP_963502.1| - 0.081 13.0 0.1 0.19 11.8 0.1 1.6 1 0 0 1 1 1 0 YyzF-like protein PIN_5 PF08745.11 gi|41615005|ref|NP_963503.1| - 6.7e-05 22.4 0.6 9.2e-05 22.0 0.6 1.3 1 1 0 1 1 1 1 PINc domain ribonuclease PIN_6 PF17146.4 gi|41615005|ref|NP_963503.1| - 7.7e-05 23.1 0.5 0.00027 21.4 0.3 1.9 2 0 0 2 2 2 1 PIN domain of ribonuclease DUF5615 PF18480.1 gi|41615005|ref|NP_963503.1| - 0.001 18.8 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN PF01850.21 gi|41615005|ref|NP_963503.1| - 0.0032 18.0 0.7 0.0051 17.3 0.4 1.4 1 1 0 1 1 1 1 PIN domain RecR PF02132.15 gi|41615005|ref|NP_963503.1| - 0.024 14.2 0.5 0.059 13.0 0.5 1.6 1 0 0 1 1 1 0 RecR protein zinc_ribbon_16 PF17034.5 gi|41615005|ref|NP_963503.1| - 0.026 14.7 0.3 0.062 13.5 0.1 1.7 2 0 0 2 2 2 0 Zinc-ribbon like family zinc-ribbons_6 PF07191.12 gi|41615005|ref|NP_963503.1| - 0.032 14.2 0.2 0.048 13.6 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-ribbon_3 PF13248.6 gi|41615005|ref|NP_963503.1| - 0.051 13.0 5.0 1.2 8.6 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain PIN_2 PF10130.9 gi|41615005|ref|NP_963503.1| - 0.056 13.7 1.9 0.25 11.6 1.9 1.9 1 1 0 1 1 1 0 PIN domain DCD PF06559.11 gi|41615005|ref|NP_963503.1| - 0.1 11.4 0.1 0.7 8.6 0.0 1.9 1 1 1 2 2 2 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) ADK_lid PF05191.14 gi|41615005|ref|NP_963503.1| - 0.18 11.8 6.2 0.86 9.6 5.6 2.3 2 1 0 2 2 2 0 Adenylate kinase, active site lid zf-RING_7 PF02591.15 gi|41615005|ref|NP_963503.1| - 0.22 11.8 5.2 0.24 11.6 0.3 2.4 2 0 0 2 2 2 0 C4-type zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|41615005|ref|NP_963503.1| - 0.35 10.7 5.2 3.9 7.3 1.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|41615005|ref|NP_963503.1| - 0.42 10.6 2.2 1.3 9.0 0.4 2.3 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|41615005|ref|NP_963503.1| - 0.59 10.3 4.9 2.6 8.2 4.9 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-Mss51 PF13824.6 gi|41615005|ref|NP_963503.1| - 0.65 10.1 3.1 1.1 9.4 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Mut7-C PF01927.16 gi|41615005|ref|NP_963503.1| - 0.72 10.0 3.0 19 5.4 0.1 2.3 1 1 1 2 2 2 0 Mut7-C RNAse domain TF_Zn_Ribbon PF08271.12 gi|41615005|ref|NP_963503.1| - 0.76 9.3 3.6 3 7.4 0.3 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C2H2 PF00096.26 gi|41615005|ref|NP_963503.1| - 0.77 10.3 4.6 5.8 7.6 3.3 2.2 1 1 1 2 2 2 0 Zinc finger, C2H2 type Zn_Tnp_IS1595 PF12760.7 gi|41615005|ref|NP_963503.1| - 4.4 7.4 6.9 14 5.8 0.3 2.3 1 1 2 3 3 3 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.6 gi|41615005|ref|NP_963503.1| - 5.6 7.6 7.9 0.39 11.2 1.7 2.0 2 0 0 2 2 2 0 Zinc-finger double domain zf-HIT PF04438.16 gi|41615005|ref|NP_963503.1| - 6 6.8 10.5 28 4.7 10.5 1.9 1 1 0 1 1 1 0 HIT zinc finger tRNA-synt_2c PF01411.19 gi|41615006|ref|NP_963504.1| - 6e-13 48.1 3.1 6e-13 48.1 3.1 1.9 1 1 1 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|41615006|ref|NP_963504.1| - 1.5e-11 44.2 0.1 4.1e-11 42.8 0.1 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain partial_CstF PF15861.5 gi|41615006|ref|NP_963504.1| - 0.07 12.9 0.4 0.85 9.5 0.2 2.5 2 0 0 2 2 2 0 Partial cleavage stimulation factor domain CagY_M PF07337.11 gi|41615006|ref|NP_963504.1| - 1.1 8.9 5.9 5.5 6.7 0.2 3.2 3 0 0 3 3 3 0 DC-EC Repeat HIT PF01230.23 gi|41615007|ref|NP_963505.1| - 1.6e-14 54.5 0.0 2.4e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|41615007|ref|NP_963505.1| - 1.1e-08 35.6 0.4 1.7e-08 34.9 0.0 1.6 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding Fmp27_SW PF10305.9 gi|41615007|ref|NP_963505.1| - 0.11 13.2 1.7 0.16 12.7 1.7 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF973 PF06157.11 gi|41615008|ref|NP_963506.1| - 0.00091 18.4 0.2 0.0018 17.4 0.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF973) FKBP_N PF01346.18 gi|41615010|ref|NP_963508.1| - 0.0022 18.9 1.7 0.0025 18.7 1.7 1.1 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AbiH PF14253.6 gi|41615010|ref|NP_963508.1| - 0.074 12.9 5.6 0.084 12.7 5.6 1.0 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH SRF-TF PF00319.18 gi|41615010|ref|NP_963508.1| - 0.33 10.5 3.6 4.2 6.9 0.1 2.7 3 0 0 3 3 3 0 SRF-type transcription factor (DNA-binding and dimerisation domain) PRKCSH-like PF12999.7 gi|41615010|ref|NP_963508.1| - 0.43 10.3 1.9 0.49 10.2 1.9 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like DUF501 PF04417.12 gi|41615010|ref|NP_963508.1| - 0.64 9.8 3.2 0.78 9.5 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF501) ATP-synt_C PF00137.21 gi|41615011|ref|NP_963509.1| - 3.1e-21 75.5 9.0 3.6e-21 75.3 9.0 1.0 1 0 0 1 1 1 1 ATP synthase subunit C G0-G1_switch_2 PF15103.6 gi|41615012|ref|NP_963510.1| - 0.51 10.8 1.3 1.9 8.9 0.1 2.1 2 0 0 2 2 2 0 G0/G1 switch protein 2 Ribosomal_S27e PF01667.17 gi|41615013|ref|NP_963511.1| - 8.4e-22 76.6 1.2 9.5e-22 76.5 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 gi|41615013|ref|NP_963511.1| - 0.02 14.4 0.2 0.032 13.7 0.2 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding DUF1451 PF07295.11 gi|41615013|ref|NP_963511.1| - 0.091 12.8 1.0 0.12 12.4 1.0 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain A2L_zn_ribbon PF08792.10 gi|41615013|ref|NP_963511.1| - 0.27 11.0 4.4 0.48 10.2 4.4 1.5 1 1 0 1 1 1 0 A2L zinc ribbon domain Desulfoferrod_N PF06397.12 gi|41615013|ref|NP_963511.1| - 3.5 7.3 9.1 0.32 10.6 0.6 2.8 1 1 2 3 3 3 0 Desulfoferrodoxin, N-terminal domain EF1_GNE PF00736.19 gi|41615014|ref|NP_963512.1| - 2.7e-14 53.1 0.3 3.2e-14 52.9 0.3 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain GIIM PF08388.11 gi|41615014|ref|NP_963512.1| - 0.095 12.8 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Group II intron, maturase-specific domain Bacteriocin_IIi PF11758.8 gi|41615015|ref|NP_963513.1| - 3.7 7.5 9.0 1.6 8.6 0.8 3.1 3 1 1 4 4 4 0 Aureocin-like type II bacteriocin DUF1533 PF07550.11 gi|41615016|ref|NP_963514.1| - 0.048 13.6 0.2 0.17 11.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1533) MgtE_N PF03448.17 gi|41615016|ref|NP_963514.1| - 0.085 13.5 0.6 0.21 12.2 0.4 1.7 2 0 0 2 2 2 0 MgtE intracellular N domain GerD PF17898.1 gi|41615016|ref|NP_963514.1| - 0.15 12.1 0.3 0.34 10.9 0.3 1.6 1 0 0 1 1 1 0 Spore germination GerD central core domain Arginase PF00491.21 gi|41615017|ref|NP_963515.1| - 9.9e-31 107.3 0.0 1.3e-30 106.9 0.0 1.1 1 0 0 1 1 1 1 Arginase family DDE_Tnp_ISL3 PF01610.17 gi|41615018|ref|NP_963516.1| - 0.022 14.5 0.3 0.026 14.3 0.3 1.2 1 0 0 1 1 1 0 Transposase MIT PF04212.18 gi|41615018|ref|NP_963516.1| - 0.047 13.8 0.2 0.047 13.8 0.2 2.3 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain Cas_Cmr5 PF09701.10 gi|41615018|ref|NP_963516.1| - 0.054 13.8 0.3 0.11 12.8 0.2 1.6 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Cmr5) KMP11 PF03037.16 gi|41615018|ref|NP_963516.1| - 0.15 12.9 2.6 0.21 12.4 1.3 2.0 1 1 0 1 1 1 0 Kinetoplastid membrane protein 11 Diphthamide_syn PF01866.17 gi|41615020|ref|NP_963518.1| - 1.9e-44 152.4 0.1 2.3e-44 152.1 0.1 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein CRF-BP PF05428.11 gi|41615020|ref|NP_963518.1| - 0.13 11.0 0.0 0.25 10.1 0.0 1.4 2 0 0 2 2 2 0 Corticotropin-releasing factor binding protein (CRF-BP) Ribosomal_S14 PF00253.21 gi|41615021|ref|NP_963519.1| - 3.2e-10 39.6 2.3 4.5e-10 39.1 2.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf_UBZ PF18439.1 gi|41615021|ref|NP_963519.1| - 0.3 10.7 2.2 9.4 5.9 0.0 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger HTH_AsnC-type PF13404.6 gi|41615022|ref|NP_963520.1| - 1.5e-14 53.5 0.2 2.7e-14 52.7 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|41615022|ref|NP_963520.1| - 6.9e-13 47.9 3.4 6.9e-13 47.9 3.4 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|41615022|ref|NP_963520.1| - 2.5e-07 30.5 1.0 6.4e-07 29.2 0.4 1.8 2 0 0 2 2 2 1 MarR family AsnC_trans_reg PF01037.21 gi|41615022|ref|NP_963520.1| - 4.5e-07 29.8 0.0 8.2e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_34 PF13601.6 gi|41615022|ref|NP_963520.1| - 1.7e-05 24.9 0.2 3.4e-05 23.9 0.2 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Mga PF08280.11 gi|41615022|ref|NP_963520.1| - 1.8e-05 24.7 1.2 3.7e-05 23.7 1.2 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_11 PF08279.12 gi|41615022|ref|NP_963520.1| - 2.4e-05 24.2 5.0 2.7e-05 24.0 1.1 2.7 3 1 0 3 3 3 1 HTH domain HTH_5 PF01022.20 gi|41615022|ref|NP_963520.1| - 7.2e-05 22.6 0.0 0.00016 21.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Mga PF05043.13 gi|41615022|ref|NP_963520.1| - 0.00052 20.6 3.4 0.00055 20.5 0.4 2.0 2 0 0 2 2 2 1 Mga helix-turn-helix domain HxlR PF01638.17 gi|41615022|ref|NP_963520.1| - 0.00066 19.5 0.1 0.001 18.8 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|41615022|ref|NP_963520.1| - 0.00093 19.2 0.0 0.0015 18.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_12 PF08461.10 gi|41615022|ref|NP_963520.1| - 0.00098 19.0 1.5 0.00098 19.0 1.5 2.0 2 0 0 2 2 1 1 Ribonuclease R winged-helix domain Rio2_N PF09202.11 gi|41615022|ref|NP_963520.1| - 0.0061 16.8 0.1 0.011 15.9 0.1 1.5 1 0 0 1 1 1 1 Rio2, N-terminal MarR_2 PF12802.7 gi|41615022|ref|NP_963520.1| - 0.0079 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|41615022|ref|NP_963520.1| - 0.0085 15.9 1.2 0.011 15.6 0.4 1.6 2 0 0 2 2 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|41615022|ref|NP_963520.1| - 0.01 16.3 0.2 0.029 14.9 0.1 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|41615022|ref|NP_963520.1| - 0.013 15.7 0.6 0.036 14.3 0.1 1.8 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.12 gi|41615022|ref|NP_963520.1| - 0.016 14.9 2.1 0.017 14.8 0.6 1.8 2 1 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_45 PF14947.6 gi|41615022|ref|NP_963520.1| - 0.019 15.0 2.2 0.019 15.0 2.2 1.8 2 1 0 2 2 1 0 Winged helix-turn-helix TrmB PF01978.19 gi|41615022|ref|NP_963520.1| - 0.027 14.4 0.7 0.095 12.6 0.1 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|41615022|ref|NP_963520.1| - 0.037 13.7 1.2 0.28 10.9 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) Rrf2 PF02082.20 gi|41615022|ref|NP_963520.1| - 0.045 14.1 0.3 0.14 12.5 0.2 1.8 2 0 0 2 2 2 0 Transcriptional regulator HTH_1 PF00126.27 gi|41615022|ref|NP_963520.1| - 0.048 13.6 0.0 0.081 12.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family FaeA PF04703.12 gi|41615022|ref|NP_963520.1| - 0.07 13.5 0.9 0.16 12.3 0.2 1.8 2 0 0 2 2 2 0 FaeA-like protein DUF211 PF02680.14 gi|41615022|ref|NP_963520.1| - 0.093 12.9 0.5 0.33 11.1 0.1 2.0 2 1 0 2 2 2 0 Uncharacterized ArCR, COG1888 HTH_Crp_2 PF13545.6 gi|41615022|ref|NP_963520.1| - 0.11 12.4 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|41615022|ref|NP_963520.1| - 0.16 11.8 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|41615022|ref|NP_963520.1| - 0.23 11.5 0.2 0.23 11.5 0.2 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain Met_10 PF02475.16 gi|41615023|ref|NP_963521.1| - 1e-36 126.5 0.0 3e-36 125.1 0.0 1.9 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|41615023|ref|NP_963521.1| - 0.13 11.8 0.9 0.18 11.4 0.2 1.7 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase tRNA-synt_1 PF00133.22 gi|41615024|ref|NP_963522.1| - 3.6e-170 567.1 6.7 3.7e-130 435.0 6.6 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|41615024|ref|NP_963522.1| - 4.2e-29 101.5 2.8 4.2e-29 101.5 2.8 2.5 3 0 0 3 3 3 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|41615024|ref|NP_963522.1| - 1.7e-25 89.6 8.3 5.6e-08 32.0 0.1 4.3 4 1 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|41615024|ref|NP_963522.1| - 2.5e-07 30.3 0.9 7.8e-05 22.2 0.0 3.5 3 1 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|41615024|ref|NP_963522.1| - 0.00082 18.4 0.1 0.0032 16.4 0.1 2.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) CpXC PF14353.6 gi|41615024|ref|NP_963522.1| - 0.0038 17.3 0.0 0.078 13.0 0.0 2.6 2 0 0 2 2 2 1 CpXC protein Rad50_zn_hook PF04423.14 gi|41615024|ref|NP_963522.1| - 0.035 13.9 1.7 0.17 11.7 0.0 3.2 2 0 0 2 2 2 0 Rad50 zinc hook motif DNA_ligase_ZBD PF03119.16 gi|41615024|ref|NP_963522.1| - 0.038 14.0 0.2 1.2 9.2 0.0 2.8 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Thioredoxin PF00085.20 gi|41615024|ref|NP_963522.1| - 0.12 12.4 0.1 0.39 10.7 0.1 1.8 1 0 0 1 1 1 0 Thioredoxin Latarcin PF10279.9 gi|41615024|ref|NP_963522.1| - 0.15 12.5 2.7 1.4 9.4 0.1 3.4 3 0 0 3 3 3 0 Latarcin precursor zf-FPG_IleRS PF06827.14 gi|41615024|ref|NP_963522.1| - 0.26 11.2 10.8 0.61 10.0 0.2 3.2 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS zf-trcl PF13451.6 gi|41615024|ref|NP_963522.1| - 0.29 11.0 0.8 0.99 9.4 0.1 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain LAGLIDADG_1 PF00961.19 gi|41615024|ref|NP_963522.1| - 1.1 10.3 7.5 0.17 12.9 1.8 2.7 2 0 0 2 2 1 0 LAGLIDADG endonuclease Mu-like_Com PF10122.9 gi|41615024|ref|NP_963522.1| - 2 7.9 4.6 1.7 8.2 0.3 2.6 3 0 0 3 3 3 0 Mu-like prophage protein Com Spt4 PF06093.13 gi|41615025|ref|NP_963523.1| - 3.7e-13 49.4 0.2 4.6e-13 49.1 0.2 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger UPF0547 PF10571.9 gi|41615025|ref|NP_963523.1| - 1.8e-05 24.7 1.6 2.9e-05 24.0 1.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|41615025|ref|NP_963523.1| - 0.00036 19.8 1.4 0.0005 19.4 1.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|41615025|ref|NP_963523.1| - 0.0018 18.2 0.9 0.0024 17.9 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|41615025|ref|NP_963523.1| - 0.0079 15.9 1.1 0.011 15.4 1.1 1.3 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|41615025|ref|NP_963523.1| - 0.037 13.6 0.2 0.037 13.6 0.2 1.9 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_15 PF17032.5 gi|41615025|ref|NP_963523.1| - 0.052 14.3 0.9 0.084 13.6 0.9 1.3 1 0 0 1 1 1 0 zinc-ribbon family HypA PF01155.19 gi|41615025|ref|NP_963523.1| - 0.058 13.4 1.1 0.071 13.1 0.8 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RRN7 PF11781.8 gi|41615025|ref|NP_963523.1| - 0.083 12.6 2.4 0.21 11.3 0.2 2.0 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF1451 PF07295.11 gi|41615025|ref|NP_963523.1| - 0.24 11.4 0.8 0.34 11.0 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain DUF58 PF01882.18 gi|41615027|ref|NP_963525.1| - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 AAA_3 PF07726.11 gi|41615028|ref|NP_963526.1| - 3.1e-62 208.2 0.1 4.6e-62 207.7 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|41615028|ref|NP_963526.1| - 6.2e-18 65.1 0.0 9.3e-18 64.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_2 PF17863.1 gi|41615028|ref|NP_963526.1| - 1.9e-17 62.9 0.0 3.1e-17 62.2 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 gi|41615028|ref|NP_963526.1| - 1.8e-08 34.8 0.0 6.8e-08 33.0 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|41615028|ref|NP_963526.1| - 6.4e-07 29.2 0.0 3e-06 27.0 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|41615028|ref|NP_963526.1| - 3.1e-05 23.8 0.0 0.0042 16.8 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain MCM PF00493.23 gi|41615028|ref|NP_963526.1| - 8.3e-05 21.8 0.0 0.039 13.0 0.0 2.2 2 0 0 2 2 2 2 MCM P-loop domain Mg_chelatase PF01078.21 gi|41615028|ref|NP_963526.1| - 0.0001 21.7 0.1 0.015 14.7 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|41615028|ref|NP_963526.1| - 0.00026 21.4 0.0 0.00041 20.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 gi|41615028|ref|NP_963526.1| - 0.0021 18.4 0.0 0.0046 17.3 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_lid_8 PF17868.1 gi|41615028|ref|NP_963526.1| - 0.037 13.9 0.2 0.068 13.1 0.2 1.4 1 0 0 1 1 1 0 AAA lid domain IstB_IS21 PF01695.17 gi|41615028|ref|NP_963526.1| - 0.059 13.1 0.0 0.19 11.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein TsaE PF02367.17 gi|41615028|ref|NP_963526.1| - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase PF06745.13 gi|41615028|ref|NP_963526.1| - 0.15 11.4 0.1 4.8 6.4 0.0 2.2 2 0 0 2 2 2 0 KaiC Glu_cyclase_2 PF05096.12 gi|41615028|ref|NP_963526.1| - 0.22 10.9 0.0 0.34 10.3 0.0 1.2 1 0 0 1 1 1 0 Glutamine cyclotransferase NMD3 PF04981.13 gi|41615029|ref|NP_963527.1| - 1.8e-31 109.5 7.6 3.8e-22 78.9 0.7 2.1 1 1 1 2 2 2 2 NMD3 family zf-C4pol PF14260.6 gi|41615029|ref|NP_963527.1| - 0.019 15.4 3.3 7.1 7.2 0.0 3.1 2 1 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta EFP_N PF08207.12 gi|41615029|ref|NP_963527.1| - 0.024 14.6 1.5 0.12 12.4 0.4 2.6 3 0 0 3 3 3 0 Elongation factor P (EF-P) KOW-like domain Atg14 PF10186.9 gi|41615029|ref|NP_963527.1| - 0.064 12.3 2.3 0.088 11.9 2.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CRC_subunit PF08624.10 gi|41615029|ref|NP_963527.1| - 0.094 13.2 2.1 0.26 11.7 2.1 1.8 1 1 0 1 1 1 0 Chromatin remodelling complex Rsc7/Swp82 subunit zf-BED PF02892.15 gi|41615029|ref|NP_963527.1| - 0.15 12.1 5.7 0.89 9.6 0.6 2.5 2 0 0 2 2 2 0 BED zinc finger Phage_H_T_join PF05521.11 gi|41615029|ref|NP_963527.1| - 0.16 12.5 1.3 8.7 6.9 0.2 2.3 2 0 0 2 2 2 0 Phage head-tail joining protein Zn-ribbon_8 PF09723.10 gi|41615029|ref|NP_963527.1| - 0.41 10.8 3.5 3.9 7.7 1.1 3.0 2 1 0 2 2 2 0 Zinc ribbon domain Rhodanese_C PF12368.8 gi|41615029|ref|NP_963527.1| - 2.4 8.6 5.0 67 4.0 0.0 2.8 2 1 0 2 2 2 0 Rhodanase C-terminal DUF2797 PF10977.8 gi|41615029|ref|NP_963527.1| - 3.3 7.5 7.1 0.88 9.4 1.0 2.7 2 1 0 3 3 3 0 Protein of unknown function (DUF2797) CpXC PF14353.6 gi|41615029|ref|NP_963527.1| - 9.6 6.3 7.7 24 5.0 0.0 3.1 3 1 0 3 3 3 0 CpXC protein Utp11 PF03998.13 gi|41615030|ref|NP_963528.1| - 0.00019 21.4 10.1 0.00026 21.0 10.1 1.3 1 0 0 1 1 1 1 Utp11 protein SLC12 PF03522.15 gi|41615030|ref|NP_963528.1| - 0.00097 18.3 10.9 0.0012 18.0 10.9 1.1 1 0 0 1 1 1 1 Solute carrier family 12 CDC45 PF02724.14 gi|41615030|ref|NP_963528.1| - 0.0095 14.3 12.1 0.011 14.1 12.1 1.1 1 0 0 1 1 1 1 CDC45-like protein Paf1 PF03985.13 gi|41615030|ref|NP_963528.1| - 0.078 12.0 21.8 0.11 11.5 21.8 1.1 1 0 0 1 1 1 0 Paf1 LAP1C PF05609.12 gi|41615030|ref|NP_963528.1| - 0.11 11.6 14.0 0.15 11.2 14.0 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DDHD PF02862.17 gi|41615030|ref|NP_963528.1| - 0.32 11.1 9.5 0.52 10.4 9.5 1.3 1 0 0 1 1 1 0 DDHD domain GAGA_bind PF06217.12 gi|41615030|ref|NP_963528.1| - 0.44 10.8 9.0 0.59 10.4 9.0 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family DUF966 PF06136.13 gi|41615030|ref|NP_963528.1| - 0.62 9.7 13.7 0.86 9.3 13.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) GREB1 PF15782.5 gi|41615030|ref|NP_963528.1| - 0.63 7.1 7.5 0.77 6.8 7.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Zip PF02535.22 gi|41615030|ref|NP_963528.1| - 1.1 8.4 10.4 1.7 7.8 10.4 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter SPATIAL PF15256.6 gi|41615030|ref|NP_963528.1| - 1.1 9.5 9.9 1.9 8.8 9.9 1.3 1 0 0 1 1 1 0 SPATIAL RR_TM4-6 PF06459.12 gi|41615030|ref|NP_963528.1| - 1.3 8.7 26.3 2.1 8.1 26.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4045 PF13254.6 gi|41615030|ref|NP_963528.1| - 2.2 7.9 21.0 3 7.4 21.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) Neur_chan_memb PF02932.16 gi|41615030|ref|NP_963528.1| - 2.5 8.1 9.2 3.9 7.5 9.2 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region V_ATPase_I PF01496.19 gi|41615030|ref|NP_963528.1| - 2.5 5.9 11.9 3.3 5.5 11.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family EVI2A PF05399.11 gi|41615030|ref|NP_963528.1| - 2.7 7.5 15.0 4.5 6.8 14.5 1.5 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Vfa1 PF08432.10 gi|41615030|ref|NP_963528.1| - 2.8 8.3 22.5 5.1 7.4 22.5 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Hydin_ADK PF17213.3 gi|41615030|ref|NP_963528.1| - 3 8.1 14.0 4.9 7.4 14.0 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain FAM60A PF15396.6 gi|41615030|ref|NP_963528.1| - 3.1 7.8 11.0 5.2 7.0 11.0 1.4 1 0 0 1 1 1 0 Protein Family FAM60A WTX PF09422.10 gi|41615030|ref|NP_963528.1| - 3.3 6.7 19.0 4.8 6.2 19.0 1.2 1 0 0 1 1 1 0 WTX protein AAA_11 PF13086.6 gi|41615030|ref|NP_963528.1| - 3.3 7.4 14.3 4.6 6.9 14.3 1.2 1 0 0 1 1 1 0 AAA domain Presenilin PF01080.17 gi|41615030|ref|NP_963528.1| - 3.4 6.3 21.0 4.9 5.8 21.0 1.2 1 0 0 1 1 1 0 Presenilin Orf78 PF06024.12 gi|41615030|ref|NP_963528.1| - 3.7 7.9 7.1 1.2 9.5 0.0 2.4 1 1 1 2 2 2 0 Orf78 (ac78) CLN3 PF02487.17 gi|41615030|ref|NP_963528.1| - 5.6 5.9 7.2 9.8 5.1 7.2 1.5 1 0 0 1 1 1 0 CLN3 protein BORG_CEP PF14957.6 gi|41615030|ref|NP_963528.1| - 6.5 7.9 7.2 15 6.7 7.2 1.7 1 0 0 1 1 1 0 Cdc42 effector DUF4407 PF14362.6 gi|41615030|ref|NP_963528.1| - 6.6 6.0 15.4 11 5.3 15.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Band_3_cyto PF07565.13 gi|41615030|ref|NP_963528.1| - 7 6.4 9.1 11 5.8 9.1 1.2 1 0 0 1 1 1 0 Band 3 cytoplasmic domain XRN_M PF17846.1 gi|41615030|ref|NP_963528.1| - 7.1 5.5 14.7 11 4.8 14.7 1.2 1 0 0 1 1 1 0 Xrn1 helical domain TP53IP5 PF15331.6 gi|41615030|ref|NP_963528.1| - 8.5 6.5 16.6 14 5.8 16.6 1.4 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 AC_N PF16214.5 gi|41615031|ref|NP_963529.1| - 6.7 5.7 4.8 7.8 5.5 4.8 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region MTS PF05175.14 gi|41615032|ref|NP_963530.1| - 4.5e-09 36.1 0.0 8.6e-08 31.9 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|41615032|ref|NP_963530.1| - 3.6e-06 26.9 0.0 7.3e-06 25.9 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|41615032|ref|NP_963530.1| - 0.00015 22.4 0.0 0.00033 21.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|41615032|ref|NP_963530.1| - 0.00041 21.0 0.0 0.00088 20.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|41615032|ref|NP_963530.1| - 0.0006 20.4 0.0 0.0013 19.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.11 gi|41615032|ref|NP_963530.1| - 0.0042 17.6 0.1 0.0071 16.8 0.1 1.3 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Methyltransf_31 PF13847.6 gi|41615032|ref|NP_963530.1| - 0.0042 16.9 0.0 0.012 15.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|41615032|ref|NP_963530.1| - 0.0046 16.6 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|41615032|ref|NP_963530.1| - 0.0078 16.0 0.0 0.4 10.4 0.0 2.0 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_Mtase PF02384.16 gi|41615032|ref|NP_963530.1| - 0.022 14.0 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase AdoMet_MTase PF07757.13 gi|41615032|ref|NP_963530.1| - 0.025 14.9 0.4 0.074 13.4 0.2 1.9 1 1 1 2 2 2 0 Predicted AdoMet-dependent methyltransferase N6-adenineMlase PF10237.9 gi|41615032|ref|NP_963530.1| - 0.03 14.1 0.0 0.055 13.3 0.0 1.4 1 1 0 1 1 1 0 Probable N6-adenine methyltransferase DUF1269 PF06897.12 gi|41615032|ref|NP_963530.1| - 0.068 13.5 0.0 0.26 11.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) DREV PF05219.12 gi|41615032|ref|NP_963530.1| - 0.091 11.8 0.0 0.3 10.2 0.0 1.7 2 0 0 2 2 2 0 DREV methyltransferase RrnaAD PF00398.20 gi|41615032|ref|NP_963530.1| - 0.093 11.8 0.0 0.094 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase PTS_IIB PF02302.17 gi|41615032|ref|NP_963530.1| - 0.2 12.4 0.0 0.79 10.5 0.0 2.0 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit tRNA-synt_1 PF00133.22 gi|41615033|ref|NP_963531.1| - 2.3e-59 201.2 9.5 1.2e-32 113.0 0.1 3.7 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|41615033|ref|NP_963531.1| - 4.8e-31 107.9 1.1 2.1e-15 56.4 0.1 3.5 2 1 1 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|41615033|ref|NP_963531.1| - 3.6e-12 46.3 0.7 8.9e-08 31.8 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|41615033|ref|NP_963531.1| - 7.9e-11 41.8 0.7 5.3e-05 22.8 0.5 3.7 2 1 0 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 Anticodon_1 PF08264.13 gi|41615033|ref|NP_963531.1| - 1.4e-06 28.3 0.3 4.3e-06 26.8 0.3 1.9 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 gi|41615033|ref|NP_963531.1| - 0.022 13.7 0.0 0.022 13.7 0.0 2.7 3 0 0 3 3 3 0 tRNA synthetases class I (K) Metallophos PF00149.28 gi|41615034|ref|NP_963532.1| - 6.4e-14 52.9 2.4 1.4e-13 51.9 2.4 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|41615034|ref|NP_963532.1| - 1.2e-07 32.0 0.0 8.8e-07 29.3 0.0 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DNA_pol_E_B PF04042.16 gi|41615034|ref|NP_963532.1| - 4e-07 29.6 0.0 1.1e-06 28.2 0.0 1.8 1 1 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B tRNA_anti-codon PF01336.25 gi|41615034|ref|NP_963532.1| - 2.2e-06 27.6 3.1 3.3e-06 27.0 0.1 2.7 3 0 0 3 3 3 1 OB-fold nucleic acid binding domain BOF PF04076.13 gi|41615034|ref|NP_963532.1| - 0.0033 17.5 0.1 0.0098 15.9 0.1 1.8 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein BURP PF03181.15 gi|41615034|ref|NP_963532.1| - 0.34 10.4 2.7 0.6 9.6 2.7 1.3 1 0 0 1 1 1 0 BURP domain Ribosomal_L6 PF00347.23 gi|41615035|ref|NP_963533.1| - 7.7e-27 93.8 3.1 2.1e-16 60.3 0.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_S7 PF00177.21 gi|41615036|ref|NP_963534.1| - 1.5e-39 135.0 1.1 2e-39 134.6 1.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e GatB_N PF02934.15 gi|41615038|ref|NP_963536.1| - 4.2e-60 203.4 0.4 5.3e-60 203.1 0.4 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain PTH2 PF01981.16 gi|41615039|ref|NP_963537.1| - 6.4e-37 126.4 0.1 7.3e-37 126.2 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 S4 PF01479.25 gi|41615041|ref|NP_963539.1| - 3.1e-17 62.0 0.1 5.2e-17 61.3 0.1 1.4 1 0 0 1 1 1 1 S4 domain ENT PF03735.14 gi|41615041|ref|NP_963539.1| - 0.00046 20.2 1.3 0.00081 19.4 0.2 1.8 1 1 1 2 2 2 1 ENT domain YPEB PF14620.6 gi|41615041|ref|NP_963539.1| - 0.0053 16.2 0.1 0.0068 15.8 0.1 1.1 1 0 0 1 1 1 1 YpeB sporulation Acetate_kinase PF00871.17 gi|41615041|ref|NP_963539.1| - 0.041 12.6 0.1 0.98 8.0 0.0 2.0 1 1 1 2 2 2 0 Acetokinase family RNase_PH PF01138.21 gi|41615042|ref|NP_963540.1| - 4.1e-26 92.0 0.1 5.5e-26 91.6 0.1 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|41615042|ref|NP_963540.1| - 9.2e-21 73.7 0.1 1.7e-20 72.8 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 YfhO PF09586.10 gi|41615043|ref|NP_963541.1| - 0.029 12.6 7.4 0.036 12.3 7.4 1.3 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF2070 PF09843.9 gi|41615043|ref|NP_963541.1| - 0.39 9.0 14.6 0.47 8.7 14.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FtsK_4TM PF13491.6 gi|41615043|ref|NP_963541.1| - 0.8 9.4 8.8 2 8.1 2.4 2.4 1 1 1 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE DUF2157 PF09925.9 gi|41615044|ref|NP_963542.1| - 0.047 13.5 7.3 1.3 8.8 0.4 2.2 2 0 0 2 2 2 0 Predicted membrane protein (DUF2157) DUF1211 PF06736.11 gi|41615044|ref|NP_963542.1| - 0.76 10.3 9.0 7.2 7.1 9.0 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1211) DUF3054 PF11255.8 gi|41615044|ref|NP_963542.1| - 1.4 9.5 9.5 0.05 14.1 1.9 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3054) Phage_holin_1 PF04531.13 gi|41615044|ref|NP_963542.1| - 4.9 7.8 9.6 0.77 10.3 1.6 2.7 1 1 2 3 3 3 0 Bacteriophage holin tRNA-synt_1 PF00133.22 gi|41615045|ref|NP_963543.1| - 2.9e-103 346.2 1.5 4.7e-102 342.2 0.3 2.7 1 1 1 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|41615045|ref|NP_963543.1| - 3.2e-24 85.4 2.3 2.5e-12 46.2 0.0 3.7 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|41615045|ref|NP_963543.1| - 1.1e-17 64.4 3.1 1.1e-17 64.4 3.1 1.9 2 0 0 2 2 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.6 gi|41615045|ref|NP_963543.1| - 2.3e-05 24.0 0.1 0.068 12.7 0.0 2.4 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 zf-TFIIB PF13453.6 gi|41615045|ref|NP_963543.1| - 0.00031 20.0 0.4 4.1 6.8 0.0 3.7 3 0 0 3 3 3 1 Transcription factor zinc-finger tRNA-synt_1e PF01406.19 gi|41615045|ref|NP_963543.1| - 0.00092 18.6 0.1 0.1 11.9 0.0 2.7 2 1 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain ADK_lid PF05191.14 gi|41615045|ref|NP_963543.1| - 0.0017 18.3 2.2 0.0046 16.9 2.2 1.8 1 0 0 1 1 1 1 Adenylate kinase, active site lid IBR PF01485.21 gi|41615045|ref|NP_963543.1| - 0.003 17.7 2.1 0.1 12.8 0.7 2.7 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain Zn_Tnp_IS1595 PF12760.7 gi|41615045|ref|NP_963543.1| - 0.0071 16.3 3.3 5.9 7.0 0.1 3.5 3 0 0 3 3 3 1 Transposase zinc-ribbon domain HCR PF07111.12 gi|41615045|ref|NP_963543.1| - 0.017 13.2 0.0 0.024 12.7 0.0 1.1 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) DUF2757 PF10955.8 gi|41615045|ref|NP_963543.1| - 0.049 13.9 0.8 0.31 11.3 0.0 2.7 3 0 0 3 3 2 0 Protein of unknown function (DUF2757) YdjO PF14169.6 gi|41615045|ref|NP_963543.1| - 0.12 12.2 1.7 0.24 11.1 0.2 2.2 2 0 0 2 2 2 0 Cold-inducible protein YdjO Zn_ribbon_SprT PF17283.2 gi|41615045|ref|NP_963543.1| - 0.16 11.9 5.0 0.3 11.0 1.0 2.7 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|41615045|ref|NP_963543.1| - 0.16 12.0 1.5 5.5 7.1 0.3 2.5 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|41615045|ref|NP_963543.1| - 0.37 10.6 7.0 7.4 6.4 0.4 3.4 3 0 0 3 3 3 0 zinc-ribbon domain CpXC PF14353.6 gi|41615045|ref|NP_963543.1| - 0.46 10.5 4.1 7 6.7 0.0 3.5 2 2 2 4 4 4 0 CpXC protein zf-LITAF-like PF10601.9 gi|41615045|ref|NP_963543.1| - 0.53 10.6 2.6 37 4.7 0.0 3.1 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf-ribbon_3 PF13248.6 gi|41615045|ref|NP_963543.1| - 0.57 9.7 7.6 14 5.3 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|41615045|ref|NP_963543.1| - 1.2 9.1 3.9 0.69 9.9 0.9 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.6 gi|41615045|ref|NP_963543.1| - 1.3 9.0 5.8 12 5.9 0.3 3.3 3 0 0 3 3 3 0 Nudix N-terminal zf-C4_Topoisom PF01396.19 gi|41615045|ref|NP_963543.1| - 2.1 8.2 4.1 48 3.9 0.1 3.3 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf_UBZ PF18439.1 gi|41615045|ref|NP_963543.1| - 5.1 6.8 5.8 22 4.7 0.1 3.7 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-ISL3 PF14690.6 gi|41615045|ref|NP_963543.1| - 6.4 7.5 8.7 10 6.9 3.0 3.2 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Auto_anti-p27 PF06677.12 gi|41615045|ref|NP_963543.1| - 6.4 7.0 5.4 3.1 8.0 1.2 2.4 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SpoIIM PF01944.17 gi|41615047|ref|NP_963545.1| - 0.0035 17.4 4.4 0.0095 16.0 4.4 1.8 1 1 0 1 1 1 1 Stage II sporulation protein M DUF2614 PF11023.8 gi|41615047|ref|NP_963545.1| - 1.1 9.4 12.0 0.23 11.6 3.8 2.3 2 1 0 2 2 2 0 Zinc-ribbon containing domain TctB PF07331.11 gi|41615047|ref|NP_963545.1| - 3.9 7.7 20.1 0.15 12.3 7.9 2.1 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family SMC_N PF02463.19 gi|41615048|ref|NP_963546.1| - 4.8e-19 68.7 7.9 4.7e-10 39.3 3.2 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|41615048|ref|NP_963546.1| - 5.5e-13 49.9 56.1 5.5e-13 49.9 56.1 6.8 2 2 2 4 4 2 1 AAA domain AAA_13 PF13166.6 gi|41615048|ref|NP_963546.1| - 8.2e-09 34.7 80.7 6.9e-05 21.7 19.4 4.4 2 1 2 4 4 4 3 AAA domain ABC_tran PF00005.27 gi|41615048|ref|NP_963546.1| - 1.7e-06 28.6 20.5 0.03 14.8 0.0 5.3 3 1 0 3 3 3 1 ABC transporter AAA_29 PF13555.6 gi|41615048|ref|NP_963546.1| - 5e-06 26.2 0.0 9e-06 25.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|41615048|ref|NP_963546.1| - 1.4e-05 24.8 0.0 1.4e-05 24.8 0.0 3.8 4 1 0 5 5 5 1 AAA domain SbcCD_C PF13558.6 gi|41615048|ref|NP_963546.1| - 2.3e-05 24.5 0.0 4.6e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Rad50_zn_hook PF04423.14 gi|41615048|ref|NP_963546.1| - 0.00041 20.1 2.2 0.00041 20.1 2.2 9.1 8 1 0 8 8 8 1 Rad50 zinc hook motif BLOC1_2 PF10046.9 gi|41615048|ref|NP_963546.1| - 0.00073 19.8 9.0 0.00073 19.8 9.0 8.5 6 2 2 9 9 7 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA_15 PF13175.6 gi|41615048|ref|NP_963546.1| - 0.0023 17.7 39.5 0.0023 17.7 39.5 3.8 1 1 2 3 3 2 2 AAA ATPase domain AAA_16 PF13191.6 gi|41615048|ref|NP_963546.1| - 0.0034 17.8 0.1 0.042 14.2 0.0 2.7 2 0 0 2 2 2 1 AAA ATPase domain Baculo_PEP_C PF04513.12 gi|41615048|ref|NP_963546.1| - 0.014 15.5 27.4 0.65 10.0 7.7 5.8 5 2 2 7 7 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus ZapB PF06005.12 gi|41615048|ref|NP_963546.1| - 0.017 15.6 7.2 0.017 15.6 7.2 9.1 7 3 2 9 9 6 0 Cell division protein ZapB NACHT PF05729.12 gi|41615048|ref|NP_963546.1| - 0.021 14.8 0.0 0.068 13.1 0.0 1.9 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 gi|41615048|ref|NP_963546.1| - 0.023 14.3 0.0 0.073 12.6 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_22 PF13401.6 gi|41615048|ref|NP_963546.1| - 0.03 14.6 2.0 0.15 12.4 0.0 3.1 3 1 0 3 3 2 0 AAA domain NPV_P10 PF05531.12 gi|41615048|ref|NP_963546.1| - 0.091 13.2 39.0 2.2 8.8 0.2 7.4 5 2 1 7 7 6 0 Nucleopolyhedrovirus P10 protein zf-Di19 PF05605.12 gi|41615048|ref|NP_963546.1| - 0.21 11.9 0.0 0.47 10.8 0.0 1.6 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding AAA_21 PF13304.6 gi|41615048|ref|NP_963546.1| - 0.21 11.3 32.4 3.8 7.2 6.1 4.0 2 2 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Filo_VP35 PF02097.15 gi|41615048|ref|NP_963546.1| - 0.25 10.3 7.1 2.7 7.0 0.0 4.1 3 1 1 4 4 4 0 Filoviridae VP35 cobW PF02492.19 gi|41615048|ref|NP_963546.1| - 0.34 10.5 4.2 1.2 8.7 0.1 2.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Exonuc_VII_L PF02601.15 gi|41615048|ref|NP_963546.1| - 0.79 9.2 50.1 0.052 13.1 4.5 3.9 2 1 0 2 2 1 0 Exonuclease VII, large subunit AAA PF00004.29 gi|41615048|ref|NP_963546.1| - 0.82 10.1 0.0 0.82 10.1 0.0 3.6 3 1 0 4 4 3 0 ATPase family associated with various cellular activities (AAA) DUF1664 PF07889.12 gi|41615048|ref|NP_963546.1| - 4.3 7.4 47.8 0.076 13.1 3.5 7.0 3 1 4 8 8 8 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|41615048|ref|NP_963546.1| - 4.7 6.0 91.7 0.42 9.5 16.7 5.6 2 1 2 5 5 5 0 Spc7 kinetochore protein DUF3584 PF12128.8 gi|41615048|ref|NP_963546.1| - 7.3 4.0 62.7 20 2.5 0.0 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3584) DUF4407 PF14362.6 gi|41615048|ref|NP_963546.1| - 8.5 5.6 37.9 1.7 7.9 1.8 4.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4407) Ribosomal_L26 PF16906.5 gi|41615050|ref|NP_963548.1| - 7.5e-25 87.2 3.3 3e-24 85.3 3.3 1.8 1 1 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|41615050|ref|NP_963548.1| - 6.4e-06 25.9 0.8 1.1e-05 25.2 0.8 1.4 1 0 0 1 1 1 1 KOW motif Ribosomal_L9_N PF01281.19 gi|41615050|ref|NP_963548.1| - 0.01 15.4 1.1 0.42 10.2 0.0 2.3 1 1 1 2 2 2 0 Ribosomal protein L9, N-terminal domain SH3_15 PF18346.1 gi|41615050|ref|NP_963548.1| - 0.11 12.8 0.2 6.3 7.2 0.0 2.4 1 1 1 2 2 2 0 Mind bomb SH3 repeat domain PRC PF05239.16 gi|41615051|ref|NP_963549.1| - 2.3e-09 37.2 0.2 2.7e-09 37.0 0.2 1.1 1 0 0 1 1 1 1 PRC-barrel domain Big_6 PF17936.1 gi|41615052|ref|NP_963550.1| - 0.0002 21.6 2.2 0.0016 18.7 0.2 3.1 4 0 0 4 4 4 1 Bacterial Ig domain tRNA_int_endo PF01974.17 gi|41615053|ref|NP_963551.1| - 2.2e-12 46.9 0.1 3.3e-12 46.3 0.1 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain Sen15 PF09631.10 gi|41615053|ref|NP_963551.1| - 0.0018 18.5 0.0 0.0028 17.9 0.0 1.4 1 1 0 1 1 1 1 Sen15 protein Claudin_2 PF13903.6 gi|41615054|ref|NP_963552.1| - 0.98 9.1 4.4 0.29 10.9 0.4 1.9 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Ribosomal_L29 PF00831.23 gi|41615055|ref|NP_963553.1| - 2.3e-16 59.5 6.1 2.6e-16 59.3 6.1 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein MRP-L47 PF06984.13 gi|41615055|ref|NP_963553.1| - 0.012 15.7 2.8 0.029 14.5 2.8 1.6 1 1 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) MutS_IV PF05190.18 gi|41615055|ref|NP_963553.1| - 0.024 15.0 0.9 0.035 14.5 0.5 1.5 1 1 1 2 2 2 0 MutS family domain IV DUF1128 PF06569.11 gi|41615055|ref|NP_963553.1| - 0.028 14.4 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1128) DUF1192 PF06698.11 gi|41615055|ref|NP_963553.1| - 0.035 14.2 0.2 0.035 14.2 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) DUF4495 PF14906.6 gi|41615055|ref|NP_963553.1| - 0.11 11.5 0.2 0.13 11.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) SUI1 PF01253.22 gi|41615056|ref|NP_963554.1| - 8e-12 45.5 0.6 1.1e-11 45.0 0.6 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|41615056|ref|NP_963554.1| - 0.0011 19.2 2.1 0.0027 18.0 2.1 1.6 1 1 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) ATP-synt_ab PF00006.25 gi|41615057|ref|NP_963555.1| - 1.8e-57 194.5 0.0 2.3e-57 194.1 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain SesA PF17107.5 gi|41615058|ref|NP_963556.1| - 0.0026 17.9 5.1 0.0049 17.1 0.0 3.6 4 0 0 4 4 4 1 N-terminal domain on NACHT_NTPase and P-loop NTPases Baculo_PEP_C PF04513.12 gi|41615058|ref|NP_963556.1| - 0.016 15.3 22.7 0.35 10.9 1.6 6.1 4 1 0 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1221 PF06760.11 gi|41615058|ref|NP_963556.1| - 0.028 13.9 0.2 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1221) DUF885 PF05960.11 gi|41615058|ref|NP_963556.1| - 0.12 12.0 0.0 0.26 10.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Toxin_38 PF14866.6 gi|41615058|ref|NP_963556.1| - 0.27 11.5 2.0 4.9 7.5 0.1 3.1 2 0 0 2 2 2 0 Potassium channel toxin HTH_19 PF12844.7 gi|41615058|ref|NP_963556.1| - 0.43 10.6 6.9 18 5.5 0.2 4.1 3 0 0 3 3 3 0 Helix-turn-helix domain YkyA PF10368.9 gi|41615058|ref|NP_963556.1| - 6.2 6.4 19.2 2.3 7.9 0.1 3.8 3 1 0 3 3 3 0 Putative cell-wall binding lipoprotein T2SSF PF00482.23 gi|41615060|ref|NP_963558.1| - 3.7e-17 62.4 0.0 3.7e-17 62.4 0.0 2.3 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F Lig_chan-Glu_bd PF10613.9 gi|41615060|ref|NP_963558.1| - 0.084 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site DUF4231 PF14015.6 gi|41615060|ref|NP_963558.1| - 0.37 11.3 8.0 0.19 12.2 3.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) T2SSF PF00482.23 gi|41615061|ref|NP_963559.1| - 8.1e-16 58.1 0.5 8.1e-16 58.1 0.5 2.7 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 gi|41615061|ref|NP_963559.1| - 0.0017 17.2 10.6 0.084 11.6 0.5 2.1 2 0 0 2 2 2 2 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 gi|41615061|ref|NP_963559.1| - 0.0056 16.7 8.0 0.019 15.0 0.8 2.4 2 0 0 2 2 2 2 Putative Actinobacterial Holin-X, holin superfamily III MgtE PF01769.16 gi|41615061|ref|NP_963559.1| - 2 8.8 15.9 0.96 9.8 6.2 2.5 2 0 0 2 2 2 0 Divalent cation transporter GTP_EFTU PF00009.27 gi|41615062|ref|NP_963560.1| - 4.8e-33 114.3 2.8 3.1e-32 111.7 2.8 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|41615062|ref|NP_963560.1| - 2.6e-18 66.0 0.0 5.7e-18 64.9 0.0 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal PduV-EutP PF10662.9 gi|41615062|ref|NP_963560.1| - 1.1e-07 31.6 2.5 0.0032 17.2 0.1 2.3 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 gi|41615062|ref|NP_963560.1| - 5.6e-07 29.6 0.0 1.2e-06 28.6 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|41615062|ref|NP_963560.1| - 8.5e-07 29.0 1.5 4.4e-05 23.5 0.9 2.3 1 1 1 2 2 2 1 RsgA GTPase GTP_EFTU_D2 PF03144.25 gi|41615062|ref|NP_963560.1| - 5e-06 26.8 1.9 7.2e-06 26.3 0.1 2.2 3 0 0 3 3 3 1 Elongation factor Tu domain 2 FeoB_N PF02421.18 gi|41615062|ref|NP_963560.1| - 0.0002 21.0 0.8 0.043 13.3 0.6 2.7 2 1 0 2 2 2 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|41615062|ref|NP_963560.1| - 0.0021 18.0 0.2 0.0039 17.2 0.2 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 gi|41615062|ref|NP_963560.1| - 0.0028 17.1 0.3 0.032 13.7 0.3 2.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit PrlF_antitoxin PF15937.5 gi|41615063|ref|NP_963561.1| - 0.06 13.8 0.3 0.76 10.3 0.0 2.4 2 0 0 2 2 2 0 prlF antitoxin for toxin YhaV_toxin IBN_N PF03810.19 gi|41615063|ref|NP_963561.1| - 0.12 12.3 8.6 0.36 10.8 0.0 4.0 4 1 0 4 4 4 0 Importin-beta N-terminal domain CARD_2 PF16739.5 gi|41615063|ref|NP_963561.1| - 9.2 6.3 10.6 4.4 7.4 0.5 4.7 4 2 3 7 7 7 0 Caspase recruitment domain Aa_trans PF01490.18 gi|41615064|ref|NP_963562.1| - 0.002 16.9 10.0 0.0026 16.5 10.0 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein HHV-5_US34A PF17087.5 gi|41615064|ref|NP_963562.1| - 0.066 13.4 0.0 0.19 11.9 0.0 1.9 1 0 0 1 1 1 0 Herpesvirus US34A protein family Deltameth_res PF16020.5 gi|41615064|ref|NP_963562.1| - 0.35 10.8 2.9 1.9 8.4 0.0 2.9 3 0 0 3 3 3 0 Deltamethrin resistance Orai-1 PF07856.12 gi|41615064|ref|NP_963562.1| - 1.4 8.6 8.4 0.064 12.9 2.8 1.6 2 0 0 2 2 2 0 Mediator of CRAC channel activity Serinc PF03348.15 gi|41615064|ref|NP_963562.1| - 1.6 7.6 10.1 0.037 13.0 2.6 1.8 2 0 0 2 2 2 0 Serine incorporator (Serinc) DUF4131 PF13567.6 gi|41615064|ref|NP_963562.1| - 2.7 7.6 6.9 1 9.0 0.2 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4131) MAP17 PF15807.5 gi|41615064|ref|NP_963562.1| - 10 6.4 6.0 1.4 9.1 0.6 2.1 2 0 0 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF5446 PF17522.2 gi|41615065|ref|NP_963563.1| - 0.49 10.6 4.5 1.7 8.9 0.0 3.2 4 0 0 4 4 4 0 Family of unknown function (DUF5446) ApoO PF09769.9 gi|41615065|ref|NP_963563.1| - 0.55 10.2 2.1 5.3 7.0 0.1 2.8 2 1 1 3 3 3 0 Apolipoprotein O Sec20 PF03908.13 gi|41615065|ref|NP_963563.1| - 0.77 9.7 6.3 1.8 8.5 0.6 3.1 3 1 0 3 3 3 0 Sec20 MnmE_helical PF12631.7 gi|41615065|ref|NP_963563.1| - 1.6 8.9 6.3 3.3 7.8 0.2 2.8 1 1 1 2 2 2 0 MnmE helical domain Ribosomal_S8 PF00410.19 gi|41615066|ref|NP_963564.1| - 2.4e-24 85.7 0.0 2.8e-24 85.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 TFIIB PF00382.19 gi|41615067|ref|NP_963565.1| - 2.1e-30 104.6 0.2 4.4e-16 58.7 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|41615067|ref|NP_963565.1| - 4.4e-16 58.1 1.2 7.5e-16 57.4 1.2 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding TFIIB_C_1 PF18542.1 gi|41615067|ref|NP_963565.1| - 1.2e-05 25.3 0.2 0.018 15.1 0.0 2.4 2 0 0 2 2 2 2 Transcription factor IIB C-terminal module 1 Cyclin_N PF00134.23 gi|41615067|ref|NP_963565.1| - 1.6e-05 24.6 0.0 0.00052 19.7 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain A2L_zn_ribbon PF08792.10 gi|41615067|ref|NP_963565.1| - 0.00011 21.8 3.3 0.00027 20.6 3.5 1.6 1 1 1 2 2 2 2 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|41615067|ref|NP_963565.1| - 0.00045 20.1 0.7 0.00093 19.1 0.7 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain DUF2089 PF09862.9 gi|41615067|ref|NP_963565.1| - 0.0012 18.8 2.3 1.3 9.0 0.1 3.6 3 1 0 3 3 3 1 Protein of unknown function (DUF2089) zinc_ribbon_10 PF10058.9 gi|41615067|ref|NP_963565.1| - 0.0016 18.1 0.8 0.0029 17.3 0.8 1.4 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein zf-RRN7 PF11781.8 gi|41615067|ref|NP_963565.1| - 0.0058 16.3 0.9 0.01 15.5 0.9 1.3 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PIN_12 PF16289.5 gi|41615067|ref|NP_963565.1| - 0.012 16.1 1.3 0.02 15.4 0.1 1.8 1 1 1 2 2 2 0 PIN domain Cyclin_C PF02984.19 gi|41615067|ref|NP_963565.1| - 0.012 15.7 0.0 0.29 11.2 0.0 2.3 1 1 1 2 2 2 0 Cyclin, C-terminal domain OrfB_Zn_ribbon PF07282.11 gi|41615067|ref|NP_963565.1| - 0.016 15.1 0.1 0.036 14.0 0.1 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|41615067|ref|NP_963565.1| - 0.019 15.1 0.7 4.7 7.4 0.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|41615067|ref|NP_963565.1| - 0.03 14.7 0.2 0.06 13.7 0.2 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar Sigma70_r4 PF04545.16 gi|41615067|ref|NP_963565.1| - 0.04 13.4 0.1 0.52 9.9 0.0 2.7 3 0 0 3 3 3 0 Sigma-70, region 4 zf-ribbon_3 PF13248.6 gi|41615067|ref|NP_963565.1| - 0.071 12.5 5.4 0.49 9.9 5.4 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|41615067|ref|NP_963565.1| - 0.1 12.7 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Ribosomal_S27e PF01667.17 gi|41615067|ref|NP_963565.1| - 0.11 12.2 0.3 0.22 11.3 0.3 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 zinc_ribbon_2 PF13240.6 gi|41615067|ref|NP_963565.1| - 0.2 11.4 2.8 1.1 9.1 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|41615067|ref|NP_963565.1| - 0.2 11.6 2.8 0.58 10.1 0.2 2.1 1 1 1 2 2 2 0 PhnA Zinc-Ribbon DNA_RNApol_7kD PF03604.13 gi|41615067|ref|NP_963565.1| - 0.22 11.3 2.2 7.7 6.3 0.1 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit TFIIS_C PF01096.18 gi|41615067|ref|NP_963565.1| - 0.48 10.3 2.2 9.1 6.2 2.2 2.2 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) Prim_Zn_Ribbon PF08273.12 gi|41615067|ref|NP_963565.1| - 0.68 10.3 3.6 2.7 8.4 3.6 1.8 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-Mss51 PF13824.6 gi|41615067|ref|NP_963565.1| - 0.73 10.0 1.9 2.6 8.2 1.9 1.9 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Rubredoxin_2 PF18073.1 gi|41615067|ref|NP_963565.1| - 2.8 7.8 5.0 6.8 6.5 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain SepF PF04472.12 gi|41615068|ref|NP_963566.1| - 2.1e-15 56.7 0.1 2.9e-15 56.3 0.1 1.2 1 0 0 1 1 1 1 Cell division protein SepF START PF01852.19 gi|41615068|ref|NP_963566.1| - 0.1 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 START domain DUF4715 PF15835.5 gi|41615070|ref|NP_963568.1| - 0.032 14.3 0.1 0.05 13.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) Fib_alpha PF08702.10 gi|41615070|ref|NP_963568.1| - 0.12 12.6 4.2 0.37 11.0 4.2 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family MCM PF00493.23 gi|41615073|ref|NP_963571.1| - 9.8e-84 279.9 0.0 1.6e-83 279.3 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 gi|41615073|ref|NP_963571.1| - 1.3e-26 92.9 1.5 2.7e-26 91.8 1.5 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_OB PF17207.3 gi|41615073|ref|NP_963571.1| - 8e-23 80.7 0.2 1.4e-22 79.9 0.2 1.3 1 0 0 1 1 1 1 MCM OB domain Mg_chelatase PF01078.21 gi|41615073|ref|NP_963571.1| - 1.1e-10 41.2 0.1 1.6e-07 30.9 0.0 2.5 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|41615073|ref|NP_963571.1| - 4.3e-08 33.3 0.0 1.1e-07 32.0 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|41615073|ref|NP_963571.1| - 0.00036 20.4 0.0 0.00075 19.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|41615073|ref|NP_963571.1| - 0.0011 18.7 0.2 0.029 14.1 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF3987 PF13148.6 gi|41615073|ref|NP_963571.1| - 0.017 14.1 0.1 4.2 6.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) RuvB_N PF05496.12 gi|41615073|ref|NP_963571.1| - 0.022 14.5 0.3 0.25 11.1 0.3 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_30 PF13604.6 gi|41615073|ref|NP_963571.1| - 0.07 12.8 1.8 0.16 11.6 0.4 2.2 2 0 0 2 2 2 0 AAA domain DUF2087 PF09860.9 gi|41615073|ref|NP_963571.1| - 0.072 13.3 0.8 3.4 7.9 0.0 3.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2087) AAA PF00004.29 gi|41615073|ref|NP_963571.1| - 0.084 13.3 0.0 0.42 11.0 0.0 2.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|41615073|ref|NP_963571.1| - 0.11 12.9 0.5 0.36 11.2 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain Zn-ribbon_8 PF09723.10 gi|41615073|ref|NP_963571.1| - 0.16 12.1 0.5 0.33 11.1 0.5 1.4 1 0 0 1 1 1 0 Zinc ribbon domain MCM_N PF14551.6 gi|41615073|ref|NP_963571.1| - 0.24 12.0 4.8 1.7 9.3 0.4 3.2 3 0 0 3 3 3 0 MCM N-terminal domain CPSase_L_D3 PF02787.19 gi|41615073|ref|NP_963571.1| - 1.1 9.6 4.1 0.74 10.2 0.1 2.8 4 0 0 4 4 4 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP_bind_3 PF01171.20 gi|41615074|ref|NP_963572.1| - 1.7e-13 50.8 0.0 2.6e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|41615074|ref|NP_963572.1| - 4.1e-06 26.9 0.1 0.00024 21.2 0.1 2.3 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family RecR PF02132.15 gi|41615074|ref|NP_963572.1| - 0.036 13.6 2.0 0.036 13.6 2.0 2.1 2 0 0 2 2 2 0 RecR protein Vps36-NZF-N PF16988.5 gi|41615074|ref|NP_963572.1| - 3.3 7.2 5.9 1.7 8.1 0.0 2.8 2 1 1 3 3 3 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zn-ribbon_14 PF16503.5 gi|41615074|ref|NP_963572.1| - 4.4 6.9 6.6 0.94 9.0 2.4 2.0 2 0 0 2 2 2 0 Zinc-ribbon Nop10p PF04135.12 gi|298205311|ref|YP_003717789.1| - 2.1e-23 82.1 3.8 2.4e-23 81.9 3.8 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|298205311|ref|YP_003717789.1| - 4.5e-05 22.9 2.0 6.2e-05 22.5 2.0 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|298205311|ref|YP_003717789.1| - 0.003 15.5 0.2 0.003 15.5 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 zf-NADH-PPase PF09297.11 gi|298205311|ref|YP_003717789.1| - 0.0033 17.0 0.9 0.16 11.7 0.1 2.2 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain DUF1272 PF06906.11 gi|298205311|ref|YP_003717789.1| - 0.0068 16.5 0.9 0.0083 16.2 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) DZR PF12773.7 gi|298205311|ref|YP_003717789.1| - 0.0081 16.2 1.1 0.011 15.7 1.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|298205311|ref|YP_003717789.1| - 0.0099 16.0 1.3 0.91 9.7 0.1 2.2 1 1 1 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like TackOD1 PF18551.1 gi|298205311|ref|YP_003717789.1| - 0.012 15.3 1.4 0.015 15.0 1.4 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 NRDD PF13597.6 gi|298205311|ref|YP_003717789.1| - 0.022 13.6 2.5 0.028 13.2 2.5 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase TF_Zn_Ribbon PF08271.12 gi|298205311|ref|YP_003717789.1| - 0.053 13.1 3.9 0.24 10.9 0.5 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-tcix PF14952.6 gi|298205311|ref|YP_003717789.1| - 0.08 12.6 5.4 3 7.5 0.9 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DNA_ligase_ZBD PF03119.16 gi|298205311|ref|YP_003717789.1| - 0.088 12.9 3.0 0.26 11.4 0.1 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C4_Topoisom PF01396.19 gi|298205311|ref|YP_003717789.1| - 0.16 11.8 8.9 0.28 11.0 1.8 2.5 1 1 1 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DEK_C PF08766.11 gi|298205311|ref|YP_003717789.1| - 0.17 11.9 0.1 0.25 11.3 0.1 1.2 1 0 0 1 1 1 0 DEK C terminal domain DUF1936 PF09151.10 gi|298205311|ref|YP_003717789.1| - 0.18 11.7 5.0 4.3 7.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) Ribosomal_L33 PF00471.20 gi|298205311|ref|YP_003717789.1| - 0.28 11.6 0.8 0.28 11.6 0.8 2.4 2 1 0 2 2 2 0 Ribosomal protein L33 Cys_rich_KTR PF14205.6 gi|298205311|ref|YP_003717789.1| - 0.3 10.9 7.1 4.5 7.1 1.3 2.4 2 0 0 2 2 2 0 Cysteine-rich KTR zinc_ribbon_2 PF13240.6 gi|298205311|ref|YP_003717789.1| - 0.45 10.3 9.3 1.6 8.6 1.8 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|298205311|ref|YP_003717789.1| - 0.54 9.8 9.7 7.7 6.1 9.7 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|298205311|ref|YP_003717789.1| - 0.65 9.4 7.7 5.1 6.5 0.8 2.3 1 1 2 3 3 3 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|298205311|ref|YP_003717789.1| - 0.68 10.1 6.2 35 4.6 0.3 2.3 1 1 1 2 2 2 0 Zinc ribbon domain Auto_anti-p27 PF06677.12 gi|298205311|ref|YP_003717789.1| - 0.93 9.7 5.2 3 8.1 0.3 2.3 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PhnA_Zn_Ribbon PF08274.12 gi|298205311|ref|YP_003717789.1| - 1.2 9.1 6.4 3.6 7.6 0.9 2.2 1 1 0 1 1 1 0 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 gi|298205311|ref|YP_003717789.1| - 3 8.3 6.4 1.2 9.5 0.4 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf_C2H2_10 PF18414.1 gi|298205311|ref|YP_003717789.1| - 3 7.4 9.9 7.9 6.1 1.6 2.6 1 1 1 2 2 2 0 C2H2 type zinc-finger T2SSF PF00482.23 gi|41615076|ref|NP_963574.1| - 2.9e-06 27.2 0.3 2.9e-06 27.2 0.3 3.9 5 1 0 5 5 5 1 Type II secretion system (T2SS), protein F COG2 PF06148.11 gi|41615076|ref|NP_963574.1| - 0.041 14.0 0.3 0.1 12.7 0.3 1.6 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF2951 PF11166.8 gi|41615076|ref|NP_963574.1| - 1.6 9.0 5.7 0.63 10.3 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) CBFD_NFYB_HMF PF00808.23 gi|41615077|ref|NP_963575.1| - 6e-13 48.9 2.5 7.6e-13 48.6 2.5 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|41615077|ref|NP_963575.1| - 1.4e-11 44.9 1.6 1.6e-11 44.7 1.6 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 gi|41615077|ref|NP_963575.1| - 4.2e-07 30.2 0.6 5.4e-07 29.9 0.6 1.1 1 0 0 1 1 1 1 CENP-S protein TAF PF02969.17 gi|41615077|ref|NP_963575.1| - 8.9e-07 29.0 2.5 1.1e-06 28.6 2.5 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T_C PF15511.6 gi|41615077|ref|NP_963575.1| - 9.6e-07 28.9 0.6 1.2e-06 28.6 0.6 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-W PF15510.6 gi|41615077|ref|NP_963575.1| - 4e-05 23.8 3.2 5.3e-05 23.4 3.2 1.1 1 0 0 1 1 1 1 CENP-W protein TFIID-31kDa PF02291.15 gi|41615077|ref|NP_963575.1| - 0.0011 19.0 0.2 0.0013 18.8 0.2 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 gi|41615077|ref|NP_963575.1| - 0.016 15.2 0.0 0.019 15.0 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated CENP-X PF09415.10 gi|41615077|ref|NP_963575.1| - 0.06 13.7 2.7 0.083 13.2 2.7 1.2 1 0 0 1 1 1 0 CENP-S associating Centromere protein X Phage_Gp19 PF09355.10 gi|41615077|ref|NP_963575.1| - 0.25 11.8 4.4 0.26 11.7 3.7 1.4 1 1 0 1 1 1 0 Phage protein Gp19/Gp15/Gp42 Ac76 PF05814.11 gi|41615078|ref|NP_963576.1| - 0.07 13.1 4.4 0.056 13.5 3.4 1.5 1 1 0 1 1 1 0 Orf76 (Ac76) Cyc-maltodext_C PF10438.9 gi|41615080|ref|NP_963578.1| - 0.057 13.5 1.5 0.22 11.7 0.1 2.6 2 0 0 2 2 2 0 Cyclo-malto-dextrinase C-terminal domain TruD PF01142.18 gi|41615082|ref|NP_963580.1| - 1.2e-73 248.3 0.3 1.2e-60 205.5 0.1 2.5 1 1 1 2 2 2 2 tRNA pseudouridine synthase D (TruD) MIB_HERC2 PF06701.13 gi|41615082|ref|NP_963580.1| - 0.042 14.1 0.0 1.2 9.5 0.0 2.3 2 0 0 2 2 2 0 Mib_herc2 UPF0181 PF03701.14 gi|41615082|ref|NP_963580.1| - 0.086 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) CARD PF00619.21 gi|41615082|ref|NP_963580.1| - 0.23 11.5 1.0 10 6.2 0.1 2.7 2 0 0 2 2 2 0 Caspase recruitment domain Diphthami_syn_2 PF01902.17 gi|41615083|ref|NP_963581.1| - 7.2e-36 123.7 0.4 1e-35 123.2 0.4 1.2 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|41615083|ref|NP_963581.1| - 0.096 12.2 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Methyltr_RsmB-F PF01189.17 gi|41615084|ref|NP_963582.1| - 9.4e-40 136.4 0.0 1.4e-39 135.9 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|41615084|ref|NP_963582.1| - 2e-07 31.4 0.0 4.4e-07 30.3 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|41615084|ref|NP_963582.1| - 8e-06 25.7 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|41615084|ref|NP_963582.1| - 0.0021 18.2 0.0 0.0096 16.1 0.0 1.9 1 1 0 2 2 2 1 FtsJ-like methyltransferase Met_10 PF02475.16 gi|41615084|ref|NP_963582.1| - 0.02 14.7 0.0 0.031 14.0 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Fibrillarin PF01269.17 gi|41615084|ref|NP_963582.1| - 0.15 11.2 0.0 2.5 7.2 0.0 2.0 2 0 0 2 2 2 0 Fibrillarin Methyltransf_25 PF13649.6 gi|41615084|ref|NP_963582.1| - 0.15 12.8 0.0 1.8 9.3 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Oxidored_nitro PF00148.19 gi|41615084|ref|NP_963582.1| - 0.24 10.1 0.0 0.37 9.5 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Ribosomal_L34e PF01199.18 gi|41615085|ref|NP_963583.1| - 1.6e-18 66.8 3.5 2e-18 66.5 3.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e zf-C3HC4_3 PF13920.6 gi|41615085|ref|NP_963583.1| - 0.016 15.0 1.2 4.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2197 PF09963.9 gi|41615085|ref|NP_963583.1| - 0.043 14.1 0.8 0.35 11.2 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) zf-C4_ClpX PF06689.13 gi|41615085|ref|NP_963583.1| - 0.043 13.7 0.1 2.8 7.9 0.0 2.1 2 0 0 2 2 2 0 ClpX C4-type zinc finger DZR PF12773.7 gi|41615085|ref|NP_963583.1| - 0.044 13.8 0.1 0.067 13.2 0.1 1.3 1 1 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.22 gi|41615085|ref|NP_963583.1| - 0.051 13.5 0.1 0.15 11.9 0.1 1.7 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_9 PF14369.6 gi|41615085|ref|NP_963583.1| - 0.064 13.5 1.1 0.22 11.8 0.2 2.0 2 0 0 2 2 2 0 zinc-ribbon DUF4428 PF14471.6 gi|41615085|ref|NP_963583.1| - 0.069 13.1 0.5 4 7.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) Phage_holin_5_2 PF16079.5 gi|41615086|ref|NP_963584.1| - 0.072 13.4 0.5 0.072 13.4 0.5 2.8 2 1 2 4 4 4 0 Phage holin family Hol44, in holin superfamily V YycH PF07435.11 gi|41615086|ref|NP_963584.1| - 0.38 9.7 1.6 0.53 9.2 1.6 1.1 1 0 0 1 1 1 0 YycH protein DUF3850 PF12961.7 gi|41615087|ref|NP_963585.1| - 0.022 14.8 0.5 0.022 14.8 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3850) ASCH PF04266.14 gi|41615087|ref|NP_963585.1| - 0.024 15.2 0.2 0.053 14.1 0.2 1.6 1 0 0 1 1 1 0 ASCH domain DUF2291 PF10054.9 gi|41615087|ref|NP_963585.1| - 0.099 12.3 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2291) ABC_tran PF00005.27 gi|41615088|ref|NP_963586.1| - 2.3e-35 122.1 0.3 1.3e-17 64.6 0.1 2.9 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|41615088|ref|NP_963586.1| - 1.9e-15 57.5 13.0 0.00039 20.3 0.8 4.2 2 2 2 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system RLI PF04068.15 gi|41615088|ref|NP_963586.1| - 1.3e-11 44.2 4.2 1.3e-11 44.2 4.2 2.1 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.19 gi|41615088|ref|NP_963586.1| - 5.5e-10 39.1 9.3 0.0024 17.3 0.1 3.6 2 2 1 3 3 3 3 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|41615088|ref|NP_963586.1| - 1.1e-08 35.6 0.1 0.007 16.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Fer4 PF00037.27 gi|41615088|ref|NP_963586.1| - 1.7e-08 33.9 4.5 1.7e-08 33.9 4.5 2.6 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|41615088|ref|NP_963586.1| - 3.9e-08 33.0 12.6 1e-06 28.6 3.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Rad17 PF03215.15 gi|41615088|ref|NP_963586.1| - 7.8e-07 29.2 0.0 0.024 14.6 0.0 2.3 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_24 PF13479.6 gi|41615088|ref|NP_963586.1| - 1.5e-06 28.1 0.2 0.034 13.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|41615088|ref|NP_963586.1| - 2.8e-06 27.7 0.4 0.0088 16.3 0.0 3.2 2 1 0 2 2 2 1 AAA domain Fer4_10 PF13237.6 gi|41615088|ref|NP_963586.1| - 3e-06 27.2 23.5 3.8e-05 23.7 1.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_23 PF13476.6 gi|41615088|ref|NP_963586.1| - 3.6e-06 27.6 11.5 0.00053 20.5 0.2 2.6 1 1 1 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|41615088|ref|NP_963586.1| - 2.8e-05 24.7 0.1 0.088 13.4 0.1 2.9 2 1 0 2 2 2 2 AAA domain Fer4_2 PF12797.7 gi|41615088|ref|NP_963586.1| - 7.2e-05 22.6 1.4 7.2e-05 22.6 1.4 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain RsgA_GTPase PF03193.16 gi|41615088|ref|NP_963586.1| - 0.00019 21.4 0.1 0.16 11.9 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|41615088|ref|NP_963586.1| - 0.0003 20.8 0.1 0.082 13.0 0.0 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_28 PF13521.6 gi|41615088|ref|NP_963586.1| - 0.00035 20.9 0.0 2.2 8.5 0.0 3.0 3 0 0 3 3 3 2 AAA domain Fer4_21 PF14697.6 gi|41615088|ref|NP_963586.1| - 0.00041 20.4 11.7 0.00071 19.7 11.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|41615088|ref|NP_963586.1| - 0.00057 20.4 1.1 0.00057 20.4 1.1 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|41615088|ref|NP_963586.1| - 0.00068 20.1 0.1 0.52 10.7 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain RNA_helicase PF00910.22 gi|41615088|ref|NP_963586.1| - 0.00075 19.9 0.0 2.6 8.5 0.0 2.9 3 0 0 3 3 2 2 RNA helicase AAA_14 PF13173.6 gi|41615088|ref|NP_963586.1| - 0.00093 19.2 7.4 0.52 10.4 0.3 3.9 2 2 1 3 3 3 2 AAA domain NB-ARC PF00931.22 gi|41615088|ref|NP_963586.1| - 0.0016 17.6 2.4 0.64 9.2 0.0 2.6 3 0 0 3 3 3 2 NB-ARC domain AAA_29 PF13555.6 gi|41615088|ref|NP_963586.1| - 0.0018 18.0 0.3 1.1 9.1 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain Fer4_9 PF13187.6 gi|41615088|ref|NP_963586.1| - 0.0025 17.9 11.2 0.0047 17.1 11.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_15 PF13175.6 gi|41615088|ref|NP_963586.1| - 0.003 17.3 14.5 0.025 14.3 0.8 2.9 1 1 1 3 3 3 1 AAA ATPase domain SRP54 PF00448.22 gi|41615088|ref|NP_963586.1| - 0.0047 16.6 0.4 2.2 7.9 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain NACHT PF05729.12 gi|41615088|ref|NP_963586.1| - 0.0055 16.6 0.7 1.4 8.8 0.0 2.8 3 0 0 3 3 2 1 NACHT domain AAA_7 PF12775.7 gi|41615088|ref|NP_963586.1| - 0.009 15.5 0.0 4.1 6.9 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region VirE PF05272.11 gi|41615088|ref|NP_963586.1| - 0.0093 15.7 0.1 1 9.0 0.1 2.3 2 0 0 2 2 2 1 Virulence-associated protein E Thymidylate_kin PF02223.17 gi|41615088|ref|NP_963586.1| - 0.011 15.4 0.7 17 5.1 0.1 4.1 5 1 0 5 5 4 0 Thymidylate kinase Fer4_3 PF12798.7 gi|41615088|ref|NP_963586.1| - 0.012 16.5 4.0 0.012 16.5 4.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_33 PF13671.6 gi|41615088|ref|NP_963586.1| - 0.012 15.8 0.0 1.7 8.8 0.0 2.9 3 1 0 3 3 2 0 AAA domain Fer4_16 PF13484.6 gi|41615088|ref|NP_963586.1| - 0.013 16.4 0.7 0.013 16.4 0.7 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain NTPase_1 PF03266.15 gi|41615088|ref|NP_963586.1| - 0.013 15.4 3.4 5.4 6.9 0.0 3.4 3 0 0 3 3 3 0 NTPase PRK PF00485.18 gi|41615088|ref|NP_963586.1| - 0.039 13.7 0.0 0.55 9.9 0.0 2.5 3 0 0 3 3 2 0 Phosphoribulokinase / Uridine kinase family TsaE PF02367.17 gi|41615088|ref|NP_963586.1| - 0.039 13.9 0.4 1.1 9.3 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SbcCD_C PF13558.6 gi|41615088|ref|NP_963586.1| - 0.042 14.1 0.0 13 6.1 0.0 2.8 3 0 0 3 3 2 0 Putative exonuclease SbcCD, C subunit Fer4_15 PF13459.6 gi|41615088|ref|NP_963586.1| - 0.044 14.5 0.8 0.044 14.5 0.8 2.8 3 0 0 3 3 2 0 4Fe-4S single cluster domain AAA_17 PF13207.6 gi|41615088|ref|NP_963586.1| - 0.047 14.1 0.5 97 3.4 0.0 3.6 3 0 0 3 3 3 0 AAA domain Fer4_8 PF13183.6 gi|41615088|ref|NP_963586.1| - 0.054 13.9 0.2 0.054 13.9 0.2 2.1 2 0 0 2 2 1 0 4Fe-4S dicluster domain AAA_30 PF13604.6 gi|41615088|ref|NP_963586.1| - 0.06 13.0 0.6 9.4 5.9 0.0 2.9 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 gi|41615088|ref|NP_963586.1| - 0.081 12.6 1.8 3.5 7.3 0.0 2.7 3 0 0 3 3 2 0 IstB-like ATP binding protein dNK PF01712.19 gi|41615088|ref|NP_963586.1| - 0.086 12.7 0.1 15 5.4 0.0 2.3 2 0 0 2 2 2 0 Deoxynucleoside kinase Adeno_IVa2 PF02456.15 gi|41615088|ref|NP_963586.1| - 0.1 11.4 1.0 0.15 10.9 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein Roc PF08477.13 gi|41615088|ref|NP_963586.1| - 0.13 12.5 0.0 3.2 8.0 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 gi|41615088|ref|NP_963586.1| - 0.14 11.9 0.4 8.1 6.2 0.0 3.0 3 0 0 3 3 2 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 gi|41615088|ref|NP_963586.1| - 0.16 12.0 0.0 12 5.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|41615088|ref|NP_963586.1| - 0.19 11.5 2.2 8 6.2 0.0 3.1 4 0 0 4 4 3 0 Holliday junction DNA helicase RuvB P-loop domain Fer4_4 PF12800.7 gi|41615088|ref|NP_963586.1| - 0.21 12.2 12.8 0.13 12.8 3.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_19 PF13245.6 gi|41615088|ref|NP_963586.1| - 0.28 11.5 0.7 32 4.8 0.1 2.8 2 0 0 2 2 2 0 AAA domain Endotoxin_C PF03944.14 gi|41615089|ref|NP_963587.1| - 0.48 10.7 6.3 9.5 6.6 0.1 3.8 4 0 0 4 4 4 0 delta endotoxin DUF5320 PF17253.2 gi|41615090|ref|NP_963588.1| - 0.18 12.9 3.9 0.25 12.4 3.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5320) tRNA-synt_1c PF00749.21 gi|41615091|ref|NP_963589.1| - 8.8e-81 271.2 0.2 1.4e-80 270.5 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|41615091|ref|NP_963589.1| - 2.5e-15 56.8 1.2 2.5e-15 56.8 1.2 2.5 2 1 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain DUF489 PF04356.12 gi|41615091|ref|NP_963589.1| - 0.047 13.7 0.6 0.078 13.0 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Put_DNA-bind_N PF06971.13 gi|41615091|ref|NP_963589.1| - 0.082 12.9 0.1 0.23 11.5 0.1 1.7 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus EcsC PF12787.7 gi|41615091|ref|NP_963589.1| - 0.14 11.9 0.6 0.66 9.6 0.0 2.1 2 0 0 2 2 2 0 EcsC protein family DUF2577 PF10844.8 gi|41615091|ref|NP_963589.1| - 1.2 9.4 6.1 15 5.9 0.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2577) Ribosomal_L35Ae PF01247.18 gi|41615092|ref|NP_963590.1| - 1.5e-18 66.7 1.2 2e-18 66.3 1.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 gi|41615092|ref|NP_963590.1| - 9.2e-07 29.0 0.9 0.011 16.0 0.4 2.1 2 0 0 2 2 2 2 RimM N-terminal domain FeoC PF09012.10 gi|41615093|ref|NP_963591.1| - 0.00027 20.9 0.0 0.00032 20.7 0.0 1.1 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_DeoR PF08220.12 gi|41615093|ref|NP_963591.1| - 0.00065 19.4 0.2 0.0039 16.9 0.2 1.8 1 1 1 2 2 2 1 DeoR-like helix-turn-helix domain TBPIP PF07106.13 gi|41615093|ref|NP_963591.1| - 0.0012 18.8 0.7 0.44 10.5 0.1 2.1 1 1 1 2 2 2 2 TBPIP/Hop2 winged helix domain Rrf2 PF02082.20 gi|41615093|ref|NP_963591.1| - 0.0021 18.4 0.1 0.0026 18.1 0.1 1.1 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 gi|41615093|ref|NP_963591.1| - 0.0022 17.9 0.2 0.0025 17.6 0.2 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|41615093|ref|NP_963591.1| - 0.0027 17.6 0.2 0.003 17.4 0.2 1.1 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|41615093|ref|NP_963591.1| - 0.004 16.7 0.6 0.0089 15.6 0.5 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|41615093|ref|NP_963591.1| - 0.011 15.6 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 MarR family HTH_AsnC-type PF13404.6 gi|41615093|ref|NP_963591.1| - 0.015 15.1 0.0 1.4 8.8 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Fe_dep_repress PF01325.19 gi|41615093|ref|NP_963591.1| - 0.024 14.9 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FaeA PF04703.12 gi|41615093|ref|NP_963591.1| - 0.045 14.1 0.0 0.057 13.8 0.0 1.1 1 0 0 1 1 1 0 FaeA-like protein MarR_2 PF12802.7 gi|41615093|ref|NP_963591.1| - 0.051 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 MarR family HTH_34 PF13601.6 gi|41615093|ref|NP_963591.1| - 0.067 13.4 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain TGT_C2 PF14810.6 gi|41615094|ref|NP_963592.1| - 3.6e-15 55.8 0.0 5.3e-15 55.3 0.0 1.3 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|41615094|ref|NP_963592.1| - 0.0029 17.5 0.0 0.0051 16.7 0.0 1.5 1 1 0 1 1 1 1 PUA domain adh_short_C2 PF13561.6 gi|41615095|ref|NP_963593.1| - 1.5e-38 132.7 0.0 5.2e-38 130.9 0.0 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|41615095|ref|NP_963593.1| - 9.1e-37 126.4 0.1 2.2e-36 125.2 0.1 1.6 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|41615095|ref|NP_963593.1| - 7.9e-08 32.4 0.2 1.1e-06 28.7 0.2 2.2 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|41615095|ref|NP_963593.1| - 3.6e-05 23.3 0.0 4.6e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NDK PF00334.19 gi|41615096|ref|NP_963594.1| - 4.3e-41 140.1 0.3 2.3e-22 79.4 0.0 2.5 1 1 1 2 2 2 2 Nucleoside diphosphate kinase tRNA-synt_2b PF00587.25 gi|41615098|ref|NP_963596.1| - 9.2e-27 94.2 0.0 2.3e-26 92.8 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|41615098|ref|NP_963596.1| - 1.9e-22 79.6 3.9 4.8e-22 78.2 3.9 1.8 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Takusan PF04822.13 gi|41615098|ref|NP_963596.1| - 0.04 13.8 0.3 0.13 12.2 0.3 1.9 1 0 0 1 1 1 0 Takusan Methyltranf_PUA PF13636.6 gi|41615099|ref|NP_963597.1| - 5e-12 45.6 0.2 1.5e-11 44.0 0.2 1.8 2 0 0 2 2 2 1 RNA-binding PUA-like domain of methyltransferase RsmF Actin_micro PF17003.5 gi|41615099|ref|NP_963597.1| - 0.16 11.2 1.4 0.17 11.0 1.4 1.3 1 1 0 1 1 1 0 Putative actin-like family DUF1189 PF06691.11 gi|41615100|ref|NP_963598.1| - 0.067 12.7 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) DUF1289 PF06945.13 gi|41615100|ref|NP_963598.1| - 0.11 12.3 0.8 0.31 10.9 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) Ribosomal_L30 PF00327.20 gi|41615101|ref|NP_963599.1| - 1.9e-10 40.4 0.1 5.8e-10 38.9 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e DUF4581 PF15167.6 gi|41615101|ref|NP_963599.1| - 0.13 12.4 0.0 0.29 11.3 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4581) PRC PF05239.16 gi|41615102|ref|NP_963600.1| - 3e-11 43.3 1.1 4.6e-11 42.7 1.1 1.3 1 1 0 1 1 1 1 PRC-barrel domain DUF3889 PF13028.6 gi|41615102|ref|NP_963600.1| - 0.034 14.1 0.1 0.046 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3889) PIN_9 PF18477.1 gi|41615103|ref|NP_963601.1| - 3e-15 56.5 0.1 3.6e-15 56.3 0.1 1.0 1 0 0 1 1 1 1 PIN like domain PIN PF01850.21 gi|41615103|ref|NP_963601.1| - 0.0026 18.3 1.0 0.004 17.7 0.8 1.4 1 1 1 2 2 2 1 PIN domain PIN_3 PF13470.6 gi|41615103|ref|NP_963601.1| - 0.051 14.3 0.1 0.062 14.1 0.1 1.2 1 0 0 1 1 1 0 PIN domain DUF2452 PF10504.9 gi|41615103|ref|NP_963601.1| - 0.12 11.8 0.4 5.1 6.5 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2452) DCD PF06559.11 gi|41615104|ref|NP_963602.1| - 3.8e-14 52.3 0.0 1.4e-13 50.4 0.0 1.7 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 gi|41615104|ref|NP_963602.1| - 4.1e-13 49.2 0.0 6.9e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 dUTPase Peptidase_S49 PF01343.18 gi|41615105|ref|NP_963603.1| - 2.3e-31 108.8 0.0 3.2e-31 108.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 gi|41615105|ref|NP_963603.1| - 6.9e-07 29.3 0.1 1.9e-05 24.7 0.0 2.1 2 0 0 2 2 2 1 Clp protease SDH_sah PF01972.16 gi|41615105|ref|NP_963603.1| - 0.00093 18.3 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Ribosomal_L27A PF00828.19 gi|41615106|ref|NP_963604.1| - 1.7e-10 41.7 2.9 3.3e-10 40.7 2.9 1.4 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Topoisom_bac PF01131.20 gi|41615107|ref|NP_963605.1| - 3.3e-84 283.3 5.5 1.3e-83 281.4 5.5 1.8 1 1 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|41615107|ref|NP_963605.1| - 3.4e-25 88.2 2.3 1e-24 86.7 0.0 3.0 3 0 0 3 3 3 1 Toprim domain DUF35_N PF12172.8 gi|41615107|ref|NP_963605.1| - 0.0061 16.4 0.2 0.0061 16.4 0.2 1.7 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) NRDD PF13597.6 gi|41615107|ref|NP_963605.1| - 0.0085 14.9 0.3 0.02 13.7 0.3 1.6 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase HypA PF01155.19 gi|41615107|ref|NP_963605.1| - 0.012 15.6 0.0 0.03 14.3 0.0 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|41615107|ref|NP_963605.1| - 0.042 14.0 0.9 0.11 12.6 0.9 1.7 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|41615107|ref|NP_963605.1| - 0.19 11.5 2.3 0.45 10.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|41615107|ref|NP_963605.1| - 1.1 8.7 2.8 1.1 8.7 0.3 2.0 1 1 1 2 2 2 0 zinc-ribbon domain Ribosomal_L7Ae PF01248.26 gi|41615108|ref|NP_963606.1| - 2.3e-33 113.8 0.4 2.9e-33 113.5 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|41615108|ref|NP_963606.1| - 0.00018 21.3 0.1 0.00026 20.8 0.1 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 gi|41615108|ref|NP_963606.1| - 0.042 13.9 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 RNase P subunit Pop3 zf-ZPR1 PF03367.13 gi|41615109|ref|NP_963607.1| - 1.7e-25 89.7 0.3 1.9e-25 89.6 0.3 1.0 1 0 0 1 1 1 1 ZPR1 zinc-finger domain zf-ribbon_3 PF13248.6 gi|41615109|ref|NP_963607.1| - 0.005 16.2 1.4 2 7.9 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Phage_GP20 PF06810.11 gi|41615109|ref|NP_963607.1| - 0.013 15.3 1.2 0.02 14.7 1.2 1.3 1 0 0 1 1 1 0 Phage minor structural protein GP20 Rad50_zn_hook PF04423.14 gi|41615109|ref|NP_963607.1| - 0.035 14.0 0.9 1 9.3 0.0 2.4 2 0 0 2 2 2 0 Rad50 zinc hook motif DNA_ligase_ZBD PF03119.16 gi|41615109|ref|NP_963607.1| - 0.061 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Lar_restr_allev PF14354.6 gi|41615109|ref|NP_963607.1| - 0.083 13.3 0.1 0.13 12.7 0.1 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-FPG_IleRS PF06827.14 gi|41615109|ref|NP_963607.1| - 0.2 11.6 0.2 0.2 11.6 0.2 2.5 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS zf-TFIIB PF13453.6 gi|41615109|ref|NP_963607.1| - 0.24 10.8 4.4 0.17 11.2 1.2 2.3 2 1 0 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|41615109|ref|NP_963607.1| - 0.61 9.9 7.4 0.61 9.9 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S17e PF00833.18 gi|41615110|ref|NP_963608.1| - 1.3e-13 50.9 0.8 1.4e-13 50.8 0.8 1.0 1 0 0 1 1 1 1 Ribosomal S17 Topoisom_bac PF01131.20 gi|41615112|ref|NP_963610.1| - 6e-33 114.5 2.1 6e-33 114.5 2.1 1.5 1 1 0 1 1 1 1 DNA topoisomerase FliS PF02561.14 gi|41615112|ref|NP_963610.1| - 0.0048 17.2 1.7 0.008 16.4 1.7 1.3 1 0 0 1 1 1 1 Flagellar protein FliS p450 PF00067.22 gi|41615112|ref|NP_963610.1| - 0.0078 15.0 0.6 0.009 14.8 0.6 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4364 PF14277.6 gi|41615112|ref|NP_963610.1| - 0.013 15.3 3.4 0.05 13.4 3.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) CFAP91 PF14738.6 gi|41615112|ref|NP_963610.1| - 0.047 13.7 5.7 0.076 13.1 5.7 1.4 1 0 0 1 1 1 0 Cilia- and flagella-associated protein 91 DUF1129 PF06570.11 gi|41615112|ref|NP_963610.1| - 0.29 10.6 2.2 0.44 10.0 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) RAMPs PF03787.15 gi|41615112|ref|NP_963610.1| - 0.51 10.3 3.6 0.63 10.0 3.6 1.1 1 0 0 1 1 1 0 RAMP superfamily YtxH PF12732.7 gi|41615112|ref|NP_963610.1| - 0.63 10.6 4.2 1.6 9.3 4.2 1.6 1 0 0 1 1 1 0 YtxH-like protein eIF-5_eIF-2B PF01873.17 gi|41615113|ref|NP_963611.1| - 1.4e-31 108.8 0.7 1.7e-31 108.5 0.7 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 gi|41615113|ref|NP_963611.1| - 0.0068 16.8 0.7 0.013 15.8 0.7 1.5 1 0 0 1 1 1 1 Restriction alleviation protein Lar Elf1 PF05129.13 gi|41615113|ref|NP_963611.1| - 0.023 14.7 0.4 0.04 14.0 0.4 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF5572 PF17733.1 gi|41615113|ref|NP_963611.1| - 0.037 13.9 0.7 7.1 6.6 0.3 3.1 2 1 1 3 3 3 0 Family of unknown function (DUF5572) PCI PF01399.27 gi|41615113|ref|NP_963611.1| - 0.24 11.9 2.0 2 9.0 2.0 2.0 1 1 0 1 1 1 0 PCI domain Arc_trans_TRASH PF08394.10 gi|41615113|ref|NP_963611.1| - 0.33 11.3 0.5 0.33 11.3 0.5 2.7 2 1 1 3 3 3 0 Archaeal TRASH domain TYW3 PF02676.14 gi|41615114|ref|NP_963612.1| - 1.1e-43 149.0 0.0 1.8e-43 148.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase TYW3 PIG-X PF08320.12 gi|41615114|ref|NP_963612.1| - 0.0097 15.8 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 1 PIG-X / PBN1 Ribosomal_S17 PF00366.20 gi|41615115|ref|NP_963613.1| - 1.4e-21 76.4 0.0 1.7e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 DUF4537 PF15057.6 gi|41615115|ref|NP_963613.1| - 0.045 13.8 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) zf-C3H1 PF10650.9 gi|41615115|ref|NP_963613.1| - 0.051 13.3 0.3 0.15 11.8 0.1 1.8 2 0 0 2 2 2 0 Putative zinc-finger domain DUF5381 PF17353.2 gi|41615115|ref|NP_963613.1| - 0.059 13.1 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Ribosomal_S17_N PF16205.5 gi|41615115|ref|NP_963613.1| - 0.078 13.4 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal_S17 N-terminal eIF-1a PF01176.19 gi|41615115|ref|NP_963613.1| - 0.11 12.4 0.0 0.26 11.1 0.0 1.6 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 AsnC_trans_reg PF01037.21 gi|41615116|ref|NP_963614.1| - 9.5e-18 63.9 0.1 1.1e-17 63.8 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|41615116|ref|NP_963614.1| - 0.0053 16.8 0.1 0.0075 16.3 0.1 1.2 1 0 0 1 1 1 1 NapD protein Methyltransf_FA PF12248.8 gi|41615117|ref|NP_963615.1| - 0.049 14.0 0.1 0.12 12.8 0.0 1.7 2 0 0 2 2 2 0 Farnesoic acid 0-methyl transferase dUTPase PF00692.19 gi|41615118|ref|NP_963616.1| - 0.001 18.7 0.0 0.0015 18.2 0.0 1.4 1 0 0 1 1 1 1 dUTPase Thioredoxin_4 PF13462.6 gi|41615119|ref|NP_963617.1| - 3.3e-05 24.1 0.2 0.00024 21.3 0.2 2.2 1 1 0 1 1 1 1 Thioredoxin GILT PF03227.16 gi|41615119|ref|NP_963617.1| - 4.8e-05 23.6 0.1 0.00016 21.9 0.0 1.9 2 0 0 2 2 2 1 Gamma interferon inducible lysosomal thiol reductase (GILT) Thioredoxin_5 PF13743.6 gi|41615119|ref|NP_963617.1| - 0.00036 20.3 0.1 0.00062 19.5 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 gi|41615119|ref|NP_963617.1| - 0.0044 16.8 0.0 0.0092 15.8 0.0 1.5 2 0 0 2 2 2 1 DSBA-like thioredoxin domain Glutaredoxin PF00462.24 gi|41615119|ref|NP_963617.1| - 0.024 14.8 0.0 6.5 7.1 0.0 2.7 2 0 0 2 2 2 0 Glutaredoxin Thioredoxin_3 PF13192.6 gi|41615119|ref|NP_963617.1| - 0.028 14.5 0.1 0.52 10.4 0.1 2.7 2 1 0 2 2 2 0 Thioredoxin domain XhlA PF10779.9 gi|41615120|ref|NP_963618.1| - 0.031 14.5 0.4 0.031 14.5 0.4 1.6 2 0 0 2 2 2 0 Haemolysin XhlA Cadherin-like PF12733.7 gi|41615121|ref|NP_963619.1| - 0.03 14.8 0.0 0.082 13.4 0.0 1.8 2 0 0 2 2 2 0 Cadherin-like beta sandwich domain DUF655 PF04919.12 gi|41615122|ref|NP_963620.1| - 3.5e-55 186.8 7.8 1.3e-54 184.9 7.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|41615122|ref|NP_963620.1| - 2e-06 28.0 2.0 0.00028 21.1 0.1 2.6 1 1 2 3 3 3 2 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|41615122|ref|NP_963620.1| - 0.0061 16.8 0.8 0.045 14.0 0.1 2.6 2 1 1 3 3 3 1 Helix-hairpin-helix motif Ribosomal_S13 PF00416.22 gi|41615122|ref|NP_963620.1| - 0.011 16.2 2.4 0.2 12.1 0.2 2.1 1 1 1 2 2 2 0 Ribosomal protein S13/S18 HHH_5 PF14520.6 gi|41615122|ref|NP_963620.1| - 0.015 15.9 1.6 0.015 15.9 1.6 2.0 2 1 0 2 2 2 0 Helix-hairpin-helix domain T4_Rnl2_C PF18043.1 gi|41615122|ref|NP_963620.1| - 0.13 12.4 1.7 0.53 10.5 0.3 2.0 2 0 0 2 2 2 0 T4 RNA ligase 2 C-terminal Luciferase_N PF05295.11 gi|41615122|ref|NP_963620.1| - 0.17 11.9 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 Luciferase/LBP N-terminal domain Mnd1 PF03962.15 gi|41615122|ref|NP_963620.1| - 1 9.7 5.2 0.28 11.5 0.9 2.3 2 1 1 3 3 3 0 Mnd1 HTH domain PseudoU_synth_1 PF01416.20 gi|41615123|ref|NP_963621.1| - 3e-17 63.0 0.0 4.3e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 tRNA pseudouridine synthase TMEM208_SND2 PF05620.11 gi|41615124|ref|NP_963622.1| - 4.5 7.0 7.5 2.1 8.1 0.6 2.2 2 0 0 2 2 2 0 SRP-independent targeting protein 2/TMEM208 NurA PF09376.10 gi|41615125|ref|NP_963623.1| - 6e-13 49.0 2.1 8.2e-13 48.6 2.1 1.1 1 0 0 1 1 1 1 NurA domain Peptidase_C6 PF00851.18 gi|41615125|ref|NP_963623.1| - 0.026 13.5 0.0 0.035 13.0 0.0 1.2 1 0 0 1 1 1 0 Helper component proteinase BOFC_N PF08977.10 gi|41615125|ref|NP_963623.1| - 0.074 13.0 0.1 0.2 11.6 0.1 1.7 1 0 0 1 1 1 0 Bypass of Forespore C, N terminal RNA_pol_N PF01194.17 gi|41615126|ref|NP_963624.1| - 1.6e-26 92.4 0.0 1.8e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit RrnaAD PF00398.20 gi|41615127|ref|NP_963625.1| - 3.6e-06 26.3 0.1 3.9e-06 26.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase TehB PF03848.14 gi|41615127|ref|NP_963625.1| - 0.00044 19.7 0.1 0.00063 19.2 0.1 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|41615127|ref|NP_963625.1| - 0.00064 19.3 0.0 0.00086 18.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|41615127|ref|NP_963625.1| - 0.00067 19.6 0.3 0.00094 19.1 0.3 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|41615127|ref|NP_963625.1| - 0.0011 18.8 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|41615127|ref|NP_963625.1| - 0.0039 16.9 0.0 0.0045 16.7 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_12 PF08242.12 gi|41615127|ref|NP_963625.1| - 0.0066 17.2 0.0 0.01 16.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|41615127|ref|NP_963625.1| - 0.013 15.3 0.1 0.062 13.0 0.1 2.0 1 1 0 1 1 1 0 Lysine methyltransferase DUF938 PF06080.12 gi|41615127|ref|NP_963625.1| - 0.014 15.2 0.0 0.022 14.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF938) PCMT PF01135.19 gi|41615127|ref|NP_963625.1| - 0.015 15.0 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GidB PF02527.15 gi|41615127|ref|NP_963625.1| - 0.019 14.3 0.1 0.03 13.7 0.1 1.3 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_25 PF13649.6 gi|41615127|ref|NP_963625.1| - 0.041 14.6 0.0 0.061 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|41615127|ref|NP_963625.1| - 0.11 12.3 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L24e PF01246.20 gi|298205312|ref|YP_003717790.1| - 3e-15 56.2 1.9 3.2e-15 56.1 1.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|298205312|ref|YP_003717790.1| - 2e-07 30.9 2.5 2.4e-07 30.6 2.5 1.1 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif YHS PF04945.13 gi|298205312|ref|YP_003717790.1| - 7.4e-06 26.0 2.1 1e-05 25.5 2.1 1.2 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|298205312|ref|YP_003717790.1| - 1.4e-05 25.3 4.4 2.2e-05 24.7 4.4 1.3 1 0 0 1 1 1 1 Archaeal TRASH domain DUF3268 PF11672.8 gi|298205312|ref|YP_003717790.1| - 0.0013 19.1 1.3 0.0013 19.0 1.3 1.1 1 0 0 1 1 1 1 zinc-finger-containing domain zf-FLZ PF04570.14 gi|298205312|ref|YP_003717790.1| - 0.014 14.9 2.6 0.021 14.3 2.6 1.3 1 1 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF2175 PF09943.9 gi|298205312|ref|YP_003717790.1| - 0.075 13.3 0.5 0.079 13.3 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) zinc_ribbon_2 PF13240.6 gi|298205312|ref|YP_003717790.1| - 0.084 12.6 0.3 0.084 12.6 0.3 2.0 2 1 0 1 1 1 0 zinc-ribbon domain DUF2256 PF10013.9 gi|298205312|ref|YP_003717790.1| - 0.14 12.3 8.4 6.6 6.9 0.0 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) PyrI_C PF02748.15 gi|298205312|ref|YP_003717790.1| - 0.14 12.1 0.5 0.14 12.1 0.5 2.1 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF2116 PF09889.9 gi|298205312|ref|YP_003717790.1| - 0.17 11.9 2.0 1.5 8.8 0.3 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Zn_ribbon_recom PF13408.6 gi|298205312|ref|YP_003717790.1| - 0.23 12.0 6.7 0.35 11.4 6.7 1.4 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain VATC PF18716.1 gi|298205312|ref|YP_003717790.1| - 0.57 10.1 7.9 2.4 8.1 7.9 1.8 1 1 0 1 1 1 0 Vms1-associating treble clef domain HAD_2 PF13419.6 gi|41615128|ref|NP_963626.1| - 1.1e-13 51.7 1.7 1e-10 42.0 0.2 2.1 1 1 1 2 2 2 2 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|41615128|ref|NP_963626.1| - 2.5e-07 31.3 0.4 2.3e-06 28.1 0.4 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|41615128|ref|NP_963626.1| - 0.00069 20.0 0.1 0.1 12.8 0.1 2.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase SpoIIAA-like PF11964.8 gi|41615128|ref|NP_963626.1| - 0.055 14.5 0.6 1 10.5 0.6 2.2 1 1 0 1 1 1 0 SpoIIAA-like Peptidase_M50 PF02163.22 gi|41615129|ref|NP_963627.1| - 3.2e-07 29.9 9.8 0.00066 19.0 0.8 3.1 3 0 0 3 3 3 3 Peptidase family M50 Toprim_4 PF13662.6 gi|41615130|ref|NP_963628.1| - 1.6e-07 31.7 1.2 7e-07 29.6 0.1 2.6 3 1 0 3 3 3 1 Toprim domain Toprim_2 PF13155.6 gi|41615130|ref|NP_963628.1| - 1.9e-05 25.0 0.1 0.0004 20.8 0.0 2.6 2 1 0 2 2 2 1 Toprim-like DUF3322 PF11795.8 gi|41615130|ref|NP_963628.1| - 0.014 15.4 0.1 0.035 14.1 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) Toprim PF01751.22 gi|41615130|ref|NP_963628.1| - 0.13 12.5 1.0 0.87 9.8 0.2 2.9 1 1 1 2 2 2 0 Toprim domain Nop PF01798.18 gi|41615131|ref|NP_963629.1| - 2.2e-59 200.7 0.3 1.2e-58 198.3 0.3 1.9 1 1 0 1 1 1 1 snoRNA binding domain, fibrillarin Imm51 PF15595.6 gi|41615131|ref|NP_963629.1| - 0.02 14.8 1.3 0.02 14.8 1.3 1.8 2 0 0 2 2 2 0 Immunity protein 51 HSP20 PF00011.21 gi|41615132|ref|NP_963630.1| - 4e-16 59.0 0.1 4.8e-16 58.8 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|41615132|ref|NP_963630.1| - 6.1e-11 41.7 0.0 1e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DJ-1_PfpI PF01965.24 gi|41615133|ref|NP_963631.1| - 5.4e-15 55.6 0.0 8.7e-15 54.9 0.0 1.3 1 1 0 1 1 1 1 DJ-1/PfpI family NRDD PF13597.6 gi|41615134|ref|NP_963632.1| - 1.3e-146 489.7 0.0 1.5e-146 489.5 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase TackOD1 PF18551.1 gi|41615134|ref|NP_963632.1| - 0.00033 20.4 0.0 0.00059 19.6 0.0 1.3 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 HypA PF01155.19 gi|41615134|ref|NP_963632.1| - 0.00058 19.8 0.2 0.0019 18.2 0.1 1.8 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin_2 PF18073.1 gi|41615134|ref|NP_963632.1| - 0.12 12.1 2.8 0.22 11.3 2.8 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain Ribosomal_L18A PF01775.17 gi|41615136|ref|NP_963634.1| - 2.6e-08 34.0 0.4 3.3e-08 33.7 0.4 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A PH PF00169.29 gi|41615136|ref|NP_963634.1| - 0.0088 16.5 0.2 0.0096 16.4 0.2 1.1 1 0 0 1 1 1 1 PH domain Memo PF01875.17 gi|41615137|ref|NP_963635.1| - 1.4e-54 185.1 0.0 1.7e-54 184.8 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein CBFD_NFYB_HMF PF00808.23 gi|41615138|ref|NP_963636.1| - 3.4e-16 59.3 1.1 3.8e-16 59.1 1.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|41615138|ref|NP_963636.1| - 2.3e-08 34.5 0.9 2.6e-08 34.3 0.9 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 gi|41615138|ref|NP_963636.1| - 8.6e-06 26.1 0.1 8.8e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 gi|41615138|ref|NP_963636.1| - 0.00011 22.3 0.1 0.00011 22.3 0.1 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Bromo_TP PF07524.13 gi|41615138|ref|NP_963636.1| - 0.00012 22.1 0.0 0.00015 21.7 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID_20kDa PF03847.13 gi|41615138|ref|NP_963636.1| - 0.00026 21.4 0.3 0.00033 21.1 0.3 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-31kDa PF02291.15 gi|41615138|ref|NP_963636.1| - 0.00035 20.7 0.1 0.00039 20.5 0.1 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit AAA_32 PF13654.6 gi|41615139|ref|NP_963637.1| - 4.7e-29 101.5 0.0 2.5e-21 76.1 0.0 2.4 2 1 0 2 2 2 2 AAA domain Lon_C PF05362.13 gi|41615139|ref|NP_963637.1| - 2.3e-24 86.1 1.1 4.3e-24 85.2 1.1 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Mg_chelatase PF01078.21 gi|41615139|ref|NP_963637.1| - 3.1e-16 59.4 0.1 2.4e-10 40.1 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|41615139|ref|NP_963637.1| - 6.7e-16 58.4 0.0 9.2e-10 38.5 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.6 gi|41615139|ref|NP_963637.1| - 3.1e-10 40.0 0.2 6.4e-10 38.9 0.2 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|41615139|ref|NP_963637.1| - 1.3e-09 38.1 0.0 6.2e-05 23.0 0.1 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|41615139|ref|NP_963637.1| - 1.2e-07 32.2 0.0 0.00034 21.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|41615139|ref|NP_963637.1| - 8.7e-07 29.3 0.0 8.6e-05 22.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 gi|41615139|ref|NP_963637.1| - 1.3e-06 28.2 0.7 0.0085 15.9 0.1 2.9 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 gi|41615139|ref|NP_963637.1| - 3.1e-05 23.2 0.0 0.013 14.6 0.1 2.5 2 0 0 2 2 2 1 MCM P-loop domain AAA_7 PF12775.7 gi|41615139|ref|NP_963637.1| - 0.00013 21.6 0.0 0.00027 20.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|41615139|ref|NP_963637.1| - 0.00014 22.2 0.3 0.17 12.2 0.0 3.6 3 1 1 4 4 4 1 AAA domain Sigma54_activ_2 PF14532.6 gi|41615139|ref|NP_963637.1| - 0.00015 21.9 0.0 0.76 9.9 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|41615139|ref|NP_963637.1| - 0.00034 20.4 0.0 0.0011 18.8 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|41615139|ref|NP_963637.1| - 0.00075 19.9 0.0 0.0018 18.7 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|41615139|ref|NP_963637.1| - 0.0016 18.2 0.0 0.0035 17.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_PrkA PF08298.11 gi|41615139|ref|NP_963637.1| - 0.0021 17.0 0.0 0.22 10.4 0.0 2.3 2 0 0 2 2 2 1 PrkA AAA domain Parvo_NS1 PF01057.17 gi|41615139|ref|NP_963637.1| - 0.0023 17.1 0.0 0.0039 16.3 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_33 PF13671.6 gi|41615139|ref|NP_963637.1| - 0.0037 17.4 0.0 0.12 12.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|41615139|ref|NP_963637.1| - 0.0046 16.2 1.5 0.17 11.0 0.0 2.9 3 0 0 3 3 3 1 TIP49 P-loop domain AAA_3 PF07726.11 gi|41615139|ref|NP_963637.1| - 0.0061 16.4 0.0 2.2 8.2 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM_lid PF17855.1 gi|41615139|ref|NP_963637.1| - 0.0082 16.5 0.0 0.02 15.3 0.0 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain ABC_tran PF00005.27 gi|41615139|ref|NP_963637.1| - 0.01 16.3 0.0 0.023 15.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter DUF853 PF05872.12 gi|41615139|ref|NP_963637.1| - 0.011 14.3 0.0 0.49 8.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF853) AAA_18 PF13238.6 gi|41615139|ref|NP_963637.1| - 0.018 15.6 0.0 0.05 14.2 0.0 1.8 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 gi|41615139|ref|NP_963637.1| - 0.024 14.6 0.0 0.064 13.2 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_29 PF13555.6 gi|41615139|ref|NP_963637.1| - 0.026 14.2 0.0 0.07 12.9 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain PhoH PF02562.16 gi|41615139|ref|NP_963637.1| - 0.027 13.9 0.0 0.062 12.8 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein Rad17 PF03215.15 gi|41615139|ref|NP_963637.1| - 0.031 14.2 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain DUF815 PF05673.13 gi|41615139|ref|NP_963637.1| - 0.036 13.2 0.0 0.15 11.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|41615139|ref|NP_963637.1| - 0.038 14.1 0.0 4.3 7.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) T2SSE PF00437.20 gi|41615139|ref|NP_963637.1| - 0.05 12.7 0.0 0.11 11.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_10 PF12846.7 gi|41615139|ref|NP_963637.1| - 0.056 12.4 0.0 0.096 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain TniB PF05621.11 gi|41615139|ref|NP_963637.1| - 0.066 12.6 0.0 0.44 9.9 0.0 2.3 3 0 0 3 3 2 0 Bacterial TniB protein RNA_helicase PF00910.22 gi|41615139|ref|NP_963637.1| - 0.082 13.3 0.0 0.19 12.2 0.0 1.6 1 0 0 1 1 1 0 RNA helicase FtsK_SpoIIIE PF01580.18 gi|41615139|ref|NP_963637.1| - 0.11 11.8 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_24 PF13479.6 gi|41615139|ref|NP_963637.1| - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|41615139|ref|NP_963637.1| - 0.13 12.3 0.1 0.41 10.6 0.0 1.9 2 0 0 2 2 1 0 Type III restriction enzyme, res subunit AAA_11 PF13086.6 gi|41615139|ref|NP_963637.1| - 0.14 12.0 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|41615139|ref|NP_963637.1| - 0.16 11.5 0.1 0.41 10.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_8 PF12780.7 gi|41615139|ref|NP_963637.1| - 0.19 11.0 0.0 0.88 8.8 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region D4 PetM PF08041.11 gi|41615139|ref|NP_963637.1| - 3.2 7.4 5.9 0.22 11.2 0.8 1.8 2 0 0 2 2 1 0 PetM family of cytochrome b6f complex subunit 7 FeS_assembly_P PF01883.19 gi|41615140|ref|NP_963638.1| - 1.1e-13 51.2 0.0 2.1e-13 50.3 0.0 1.5 1 1 1 2 2 2 1 Iron-sulfur cluster assembly protein DUF5376 PF17346.2 gi|41615140|ref|NP_963638.1| - 0.069 13.5 0.1 0.077 13.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5376) HTH_37 PF13744.6 gi|41615141|ref|NP_963639.1| - 0.00023 21.1 0.3 0.0012 18.8 0.0 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|41615141|ref|NP_963639.1| - 0.0048 16.9 0.1 0.01 15.9 0.1 1.7 1 1 0 1 1 1 1 Helix-turn-helix YdaS_antitoxin PF15943.5 gi|41615141|ref|NP_963639.1| - 0.0084 15.9 0.0 0.027 14.3 0.0 1.7 1 1 1 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT NYD-SP28_assoc PF14775.6 gi|41615141|ref|NP_963639.1| - 0.012 15.7 0.3 0.017 15.2 0.3 1.2 1 0 0 1 1 1 0 Sperm tail C-terminal domain HNOBA PF07701.14 gi|41615141|ref|NP_963639.1| - 0.022 14.2 0.1 0.022 14.2 0.1 1.1 1 0 0 1 1 1 0 Heme NO binding associated HTH_19 PF12844.7 gi|41615141|ref|NP_963639.1| - 0.024 14.6 0.5 0.04 13.9 0.5 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_31 PF13560.6 gi|41615141|ref|NP_963639.1| - 0.11 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|41615141|ref|NP_963639.1| - 0.14 12.1 0.1 1.1 9.2 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF63 PF01889.17 gi|41615142|ref|NP_963640.1| - 1.7e-08 35.0 24.1 1.9e-06 28.3 24.1 2.2 1 1 0 1 1 1 1 Membrane protein of unknown function DUF63 FtsX PF02687.21 gi|41615142|ref|NP_963640.1| - 0.1 13.0 0.4 0.1 13.0 0.4 3.3 2 1 0 2 2 2 0 FtsX-like permease family DUF4337 PF14235.6 gi|41615143|ref|NP_963641.1| - 0.13 12.4 0.9 0.21 11.7 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF1664 PF07889.12 gi|41615144|ref|NP_963642.1| - 7.6e-05 22.8 4.2 8.8e-05 22.5 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) CLZ PF16526.5 gi|41615144|ref|NP_963642.1| - 0.00076 19.8 1.3 0.00076 19.8 1.3 1.6 1 1 1 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Snapin_Pallidin PF14712.6 gi|41615144|ref|NP_963642.1| - 0.0037 17.7 3.6 0.0044 17.4 3.6 1.2 1 0 0 1 1 1 1 Snapin/Pallidin TssO PF17561.2 gi|41615144|ref|NP_963642.1| - 0.0048 17.0 8.7 0.006 16.7 8.7 1.2 1 0 0 1 1 1 1 Type VI secretion system, TssO COG6 PF06419.11 gi|41615144|ref|NP_963642.1| - 0.0049 15.2 3.8 0.0052 15.1 3.8 1.0 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 Cauli_AT PF03233.13 gi|41615144|ref|NP_963642.1| - 0.0054 16.7 8.1 0.0064 16.4 8.1 1.0 1 0 0 1 1 1 1 Aphid transmission protein Nucleo_P87 PF07267.11 gi|41615144|ref|NP_963642.1| - 0.0062 15.5 0.7 0.0064 15.4 0.7 1.1 1 0 0 1 1 1 1 Nucleopolyhedrovirus capsid protein P87 RasGAP_C PF03836.15 gi|41615144|ref|NP_963642.1| - 0.0083 16.3 4.9 0.018 15.2 4.9 1.6 1 1 0 1 1 1 1 RasGAP C-terminus CENP-F_leu_zip PF10473.9 gi|41615144|ref|NP_963642.1| - 0.0085 16.1 5.9 0.0095 16.0 5.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3450 PF11932.8 gi|41615144|ref|NP_963642.1| - 0.0096 15.2 3.1 0.01 15.2 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) KASH_CCD PF14662.6 gi|41615144|ref|NP_963642.1| - 0.012 15.5 6.2 0.012 15.4 6.2 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF4795 PF16043.5 gi|41615144|ref|NP_963642.1| - 0.014 15.1 5.6 0.015 14.9 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) AIP3 PF03915.13 gi|41615144|ref|NP_963642.1| - 0.015 14.4 3.8 0.017 14.3 3.8 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 Fzo_mitofusin PF04799.13 gi|41615144|ref|NP_963642.1| - 0.027 14.0 1.7 0.032 13.8 1.7 1.2 1 0 0 1 1 1 0 fzo-like conserved region DUF16 PF01519.16 gi|41615144|ref|NP_963642.1| - 0.033 14.7 5.7 0.039 14.5 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 COG2 PF06148.11 gi|41615144|ref|NP_963642.1| - 0.033 14.3 2.1 0.041 14.0 2.1 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Prominin PF05478.11 gi|41615144|ref|NP_963642.1| - 0.035 12.1 4.8 0.043 11.8 4.8 1.0 1 0 0 1 1 1 0 Prominin Tweety PF04906.13 gi|41615144|ref|NP_963642.1| - 0.046 12.4 0.7 0.051 12.3 0.7 1.0 1 0 0 1 1 1 0 Tweety TMPIT PF07851.13 gi|41615144|ref|NP_963642.1| - 0.05 12.9 4.1 0.051 12.8 4.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein HMMR_N PF15905.5 gi|41615144|ref|NP_963642.1| - 0.052 13.0 8.1 0.058 12.9 8.1 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Prefoldin_2 PF01920.20 gi|41615144|ref|NP_963642.1| - 0.056 13.4 10.3 0.7 9.9 4.7 2.1 1 1 1 2 2 2 0 Prefoldin subunit DUF5082 PF16888.5 gi|41615144|ref|NP_963642.1| - 0.066 13.5 10.3 0.68 10.2 3.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Laminin_II PF06009.12 gi|41615144|ref|NP_963642.1| - 0.085 12.9 4.3 0.1 12.6 4.3 1.1 1 0 0 1 1 1 0 Laminin Domain II XhlA PF10779.9 gi|41615144|ref|NP_963642.1| - 0.086 13.1 10.7 0.13 12.5 10.3 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DUF2443 PF10398.9 gi|41615144|ref|NP_963642.1| - 0.096 12.8 7.0 0.46 10.6 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2443) FapA PF03961.13 gi|41615144|ref|NP_963642.1| - 0.1 11.2 11.2 0.11 11.0 11.2 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Acetyltransf_11 PF13720.6 gi|41615144|ref|NP_963642.1| - 0.14 12.6 0.5 0.23 12.0 0.5 1.5 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DivIC PF04977.15 gi|41615144|ref|NP_963642.1| - 0.26 11.1 6.2 0.34 10.7 5.7 1.5 1 1 0 1 1 1 0 Septum formation initiator Atg14 PF10186.9 gi|41615144|ref|NP_963642.1| - 0.35 9.9 5.0 0.39 9.7 5.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_1 PF00170.21 gi|41615144|ref|NP_963642.1| - 0.97 9.6 8.0 0.82 9.8 2.0 2.2 1 1 0 2 2 2 0 bZIP transcription factor ISG65-75 PF11727.8 gi|41615144|ref|NP_963642.1| - 0.98 8.6 5.4 1.5 8.0 5.0 1.4 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF3213 PF11491.8 gi|41615144|ref|NP_963642.1| - 1 9.6 8.9 0.47 10.7 2.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3213) DASH_Dad1 PF08649.10 gi|41615144|ref|NP_963642.1| - 1.8 8.8 7.0 0.53 10.5 0.3 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad1 YvrJ PF12841.7 gi|41615144|ref|NP_963642.1| - 3.5 7.2 6.6 3.4 7.3 1.7 2.4 2 0 0 2 2 2 0 YvrJ protein family Zn-ribbon_8 PF09723.10 gi|41615146|ref|NP_963644.1| - 8.1e-06 25.8 0.6 1.3e-05 25.1 0.6 1.3 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|41615146|ref|NP_963644.1| - 0.0042 17.1 0.5 0.005 16.9 0.5 1.2 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|41615146|ref|NP_963644.1| - 0.0047 16.9 0.9 0.0073 16.3 0.9 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|41615146|ref|NP_963644.1| - 0.0047 16.8 4.1 0.17 11.8 0.4 2.5 2 0 0 2 2 2 1 zinc-ribbon domain UPF0547 PF10571.9 gi|41615146|ref|NP_963644.1| - 0.013 15.5 1.1 1.8 8.7 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ACC PF17848.1 gi|41615146|ref|NP_963644.1| - 0.028 14.5 2.7 0.16 12.1 0.1 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain ADK_lid PF05191.14 gi|41615146|ref|NP_963644.1| - 0.034 14.1 0.4 0.06 13.3 0.4 1.5 1 0 0 1 1 1 0 Adenylate kinase, active site lid zf-C2H2_3 PF13878.6 gi|41615146|ref|NP_963644.1| - 0.043 13.6 2.7 0.21 11.4 0.1 2.2 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-ribbon_3 PF13248.6 gi|41615146|ref|NP_963644.1| - 0.044 13.2 2.8 0.91 9.0 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-BED PF02892.15 gi|41615146|ref|NP_963644.1| - 0.055 13.5 0.5 0.11 12.5 0.5 1.6 1 0 0 1 1 1 0 BED zinc finger NOB1_Zn_bind PF08772.11 gi|41615146|ref|NP_963644.1| - 0.071 13.3 2.8 0.11 12.7 2.8 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DUF2688 PF10892.8 gi|41615146|ref|NP_963644.1| - 0.1 12.1 8.7 0.27 10.8 0.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2688) ANT PF03374.14 gi|41615146|ref|NP_963644.1| - 0.1 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain Rubredoxin_2 PF18073.1 gi|41615146|ref|NP_963644.1| - 0.11 12.3 3.5 3.3 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain TF_Zn_Ribbon PF08271.12 gi|41615146|ref|NP_963644.1| - 0.13 11.8 2.5 0.58 9.7 2.5 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding YhfH PF14149.6 gi|41615146|ref|NP_963644.1| - 0.26 11.3 5.2 0.72 9.9 0.1 2.4 1 1 2 3 3 3 0 YhfH-like protein zinc_ribbon_2 PF13240.6 gi|41615146|ref|NP_963644.1| - 0.29 10.9 4.5 5 7.0 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|41615146|ref|NP_963644.1| - 0.47 10.4 5.1 2.8 7.9 0.4 2.7 2 1 1 3 3 3 0 Putative transposase DNA-binding domain HalOD2 PF18547.1 gi|41615146|ref|NP_963644.1| - 0.51 10.3 2.3 4.4 7.3 0.5 2.1 2 0 0 2 2 2 0 Halobacterial output domain 2 zn-ribbon_14 PF16503.5 gi|41615146|ref|NP_963644.1| - 0.59 9.7 4.6 8 6.1 0.4 2.4 2 0 0 2 2 2 0 Zinc-ribbon NRDD PF13597.6 gi|41615146|ref|NP_963644.1| - 0.63 8.8 2.9 1.1 8.0 2.3 1.6 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase DUF35_N PF12172.8 gi|41615146|ref|NP_963644.1| - 0.77 9.7 5.6 9 6.3 5.6 2.1 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf_UBZ PF18439.1 gi|41615146|ref|NP_963644.1| - 1.5 8.5 4.8 6.7 6.4 0.1 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Mu-like_Com PF10122.9 gi|41615146|ref|NP_963644.1| - 4 7.0 6.9 2.9 7.4 4.4 2.2 2 1 0 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_5 PF13719.6 gi|41615146|ref|NP_963644.1| - 5.8 6.8 12.8 4.4 7.2 0.2 2.7 2 1 0 2 2 2 0 zinc-ribbon domain Metallophos PF00149.28 gi|41615147|ref|NP_963645.1| - 4.2e-06 27.4 4.7 5.3e-06 27.1 4.0 1.6 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|41615147|ref|NP_963645.1| - 8.2e-05 22.8 0.0 0.00011 22.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain UPF0113 PF03657.13 gi|41615147|ref|NP_963645.1| - 0.046 14.0 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 UPF0113 PUA domain SMC_ScpB PF04079.16 gi|41615148|ref|NP_963646.1| - 0.0098 15.5 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB tRNA_anti-codon PF01336.25 gi|41615148|ref|NP_963646.1| - 0.052 13.5 0.7 2.2 8.3 0.3 2.6 1 1 1 2 2 2 0 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|41615148|ref|NP_963646.1| - 0.09 12.6 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 Ribosomal_S28e PF01200.18 gi|41615149|ref|NP_963647.1| - 4.1e-30 103.6 1.9 5.7e-30 103.1 1.9 1.2 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L2_C PF03947.18 gi|41615150|ref|NP_963648.1| - 2e-37 128.2 0.1 3e-37 127.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|41615150|ref|NP_963648.1| - 1.6e-10 40.8 0.0 3.4e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Amidase PF01425.21 gi|41615151|ref|NP_963649.1| - 1.4e-88 297.9 0.0 2e-88 297.4 0.0 1.2 1 0 0 1 1 1 1 Amidase Polbeta PF18765.1 gi|41615152|ref|NP_963650.1| - 3e-07 30.4 0.2 8e-07 29.1 0.2 1.8 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|41615152|ref|NP_963650.1| - 1.5e-05 25.2 0.1 3.5e-05 24.0 0.1 1.6 1 0 0 1 1 1 1 Nucleotidyltransferase domain Alba PF01918.21 gi|41615153|ref|NP_963651.1| - 2e-18 66.0 0.1 2.9e-18 65.4 0.1 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 gi|41615153|ref|NP_963651.1| - 0.0033 17.4 1.7 0.02 14.8 1.7 1.9 1 1 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Ribosomal_L31e PF01198.19 gi|41615154|ref|NP_963652.1| - 2.7e-15 56.4 1.7 3.1e-15 56.2 1.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Ribosomal_L22 PF00237.19 gi|41615155|ref|NP_963653.1| - 2.2 8.5 9.5 0.47 10.7 3.3 2.7 2 0 0 2 2 2 0 Ribosomal protein L22p/L17e MerR-DNA-bind PF09278.11 gi|41615155|ref|NP_963653.1| - 6.3 7.4 10.0 7.5 7.2 0.7 3.2 3 0 0 3 3 3 0 MerR, DNA binding MMR_HSR1 PF01926.23 gi|41615156|ref|NP_963654.1| - 4.1e-16 59.1 0.1 2e-14 53.7 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|41615156|ref|NP_963654.1| - 3.6e-08 33.5 0.1 6.3e-08 32.7 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 gi|41615156|ref|NP_963654.1| - 2.6e-07 30.3 0.6 1.1e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|41615156|ref|NP_963654.1| - 2.1e-05 24.7 0.4 0.0016 18.6 0.1 2.8 2 1 0 2 2 2 1 Dynamin family IIGP PF05049.13 gi|41615156|ref|NP_963654.1| - 0.00027 20.1 0.0 0.00046 19.4 0.0 1.3 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) PduV-EutP PF10662.9 gi|41615156|ref|NP_963654.1| - 0.0063 16.3 0.1 1.9 8.2 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation SL4P PF17618.2 gi|41615156|ref|NP_963654.1| - 0.018 15.1 1.2 0.049 13.7 0.2 2.1 2 0 0 2 2 2 0 Uncharacterized Strongylid L4 protein GBP PF02263.19 gi|41615156|ref|NP_963654.1| - 0.026 13.8 0.0 0.042 13.1 0.0 1.3 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain AAA_18 PF13238.6 gi|41615156|ref|NP_963654.1| - 0.11 13.1 0.4 0.25 11.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain CTP_transf_like PF01467.26 gi|41615157|ref|NP_963655.1| - 1e-05 25.7 0.0 3.9e-05 23.9 0.0 1.8 1 1 0 1 1 1 1 Cytidylyltransferase-like AP_endonuc_2 PF01261.24 gi|41615158|ref|NP_963656.1| - 1.2e-08 34.7 0.0 1.4e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel BKACE PF05853.12 gi|41615158|ref|NP_963656.1| - 0.00047 19.6 0.0 0.018 14.4 0.0 2.1 1 1 1 2 2 2 2 beta-keto acid cleavage enzyme UvdE PF03851.14 gi|41615158|ref|NP_963656.1| - 0.047 12.9 0.1 0.097 11.9 0.0 1.5 1 1 0 1 1 1 0 UV-endonuclease UvdE ResIII PF04851.15 gi|41615159|ref|NP_963657.1| - 7.7e-20 71.6 0.5 4.4e-19 69.1 0.1 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|41615159|ref|NP_963657.1| - 8.7e-17 61.4 0.5 6.3e-16 58.6 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|41615159|ref|NP_963657.1| - 1.8e-13 50.8 0.1 3.4e-11 43.5 0.0 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|41615159|ref|NP_963657.1| - 6e-09 35.5 0.8 1.5e-08 34.2 0.2 1.9 2 0 0 2 2 2 1 ERCC3/RAD25/XPB C-terminal helicase DUF2075 PF09848.9 gi|41615159|ref|NP_963657.1| - 0.011 15.0 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) PhoH PF02562.16 gi|41615159|ref|NP_963657.1| - 0.016 14.7 0.3 0.056 12.9 0.3 2.0 1 1 0 1 1 1 0 PhoH-like protein Flavi_DEAD PF07652.14 gi|41615159|ref|NP_963657.1| - 0.066 13.2 0.1 0.33 10.9 0.0 2.0 2 0 0 2 2 2 0 Flavivirus DEAD domain Fibroin_P25 PF07294.11 gi|41615159|ref|NP_963657.1| - 0.091 12.8 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Fibroin P25 AAA_19 PF13245.6 gi|41615159|ref|NP_963657.1| - 0.098 13.0 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|41615159|ref|NP_963657.1| - 0.14 11.8 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|41615159|ref|NP_963657.1| - 0.25 10.7 0.0 0.25 10.7 0.0 2.3 3 0 0 3 3 3 0 KaiC SHS2_Rpb7-N PF03876.17 gi|41615160|ref|NP_963658.1| - 1.3e-17 63.9 0.0 4.6e-17 62.1 0.0 1.9 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|41615160|ref|NP_963658.1| - 4e-11 43.1 1.3 7.5e-11 42.2 1.3 1.4 1 0 0 1 1 1 1 S1 RNA binding domain RAMPs PF03787.15 gi|41615160|ref|NP_963658.1| - 0.05 13.6 0.2 0.091 12.8 0.2 1.4 1 0 0 1 1 1 0 RAMP superfamily UDG PF03167.19 gi|41615161|ref|NP_963659.1| - 5.1e-45 153.2 0.0 6.2e-45 153.0 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Sec34 PF04136.15 gi|41615162|ref|NP_963660.1| - 0.00022 21.1 22.9 0.1 12.5 5.2 3.3 1 1 2 3 3 3 3 Sec34-like family DUF948 PF06103.11 gi|41615162|ref|NP_963660.1| - 0.001 19.3 12.8 0.099 12.9 1.6 3.0 2 1 1 3 3 3 3 Bacterial protein of unknown function (DUF948) Seryl_tRNA_N PF02403.22 gi|41615162|ref|NP_963660.1| - 0.0082 16.4 13.6 0.0082 16.4 13.6 3.9 1 1 2 3 3 3 1 Seryl-tRNA synthetase N-terminal domain Laminin_I PF06008.14 gi|41615162|ref|NP_963660.1| - 0.018 14.8 32.1 0.091 12.4 30.7 2.4 1 1 0 1 1 1 0 Laminin Domain I HeLo PF14479.6 gi|41615162|ref|NP_963660.1| - 0.03 14.2 15.9 0.12 12.2 15.7 2.0 1 1 0 1 1 1 0 Prion-inhibition and propagation T3SSipB PF16535.5 gi|41615162|ref|NP_963660.1| - 0.035 14.6 10.6 2.1 8.8 3.8 2.5 1 1 1 2 2 2 0 Type III cell invasion protein SipB WXG100 PF06013.12 gi|41615162|ref|NP_963660.1| - 0.038 14.2 6.6 0.48 10.7 0.2 4.2 2 1 2 4 4 4 0 Proteins of 100 residues with WXG DUF745 PF05335.13 gi|41615162|ref|NP_963660.1| - 0.055 13.2 16.0 0.12 12.1 4.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF745) Baculo_PEP_C PF04513.12 gi|41615162|ref|NP_963660.1| - 0.056 13.5 8.4 0.5 10.4 0.3 3.2 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 gi|41615162|ref|NP_963660.1| - 0.071 13.6 15.7 4.8 7.7 1.1 4.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein CorA PF01544.18 gi|41615162|ref|NP_963660.1| - 0.071 12.4 24.9 0.26 10.6 3.1 2.4 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein YabA PF06156.13 gi|41615162|ref|NP_963660.1| - 0.083 13.5 36.1 0.21 12.3 8.1 3.5 2 1 1 3 3 3 0 Initiation control protein YabA EzrA PF06160.12 gi|41615162|ref|NP_963660.1| - 0.12 10.5 42.4 0.24 9.5 24.2 2.7 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA FapA PF03961.13 gi|41615162|ref|NP_963660.1| - 0.14 10.7 44.2 0.51 8.9 20.7 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A Spc7 PF08317.11 gi|41615162|ref|NP_963660.1| - 0.33 9.8 46.7 0.045 12.6 8.5 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Uso1_p115_C PF04871.13 gi|41615162|ref|NP_963660.1| - 0.4 11.1 40.7 0.05 14.0 13.8 3.2 1 1 2 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region Plk4_PB2 PF18409.1 gi|41615162|ref|NP_963660.1| - 0.41 11.3 13.0 3.1 8.5 1.2 2.6 1 1 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 FliD_C PF07195.12 gi|41615162|ref|NP_963660.1| - 0.41 10.0 21.4 0.61 9.5 3.2 3.2 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 C-terminus COG6 PF06419.11 gi|41615162|ref|NP_963660.1| - 0.47 8.6 26.1 0.22 9.7 7.0 2.3 2 0 0 2 2 2 0 Conserved oligomeric complex COG6 TMPIT PF07851.13 gi|41615162|ref|NP_963660.1| - 0.58 9.4 30.0 1.4 8.1 8.4 2.5 1 1 3 4 4 4 0 TMPIT-like protein HALZ PF02183.18 gi|41615162|ref|NP_963660.1| - 0.94 9.8 26.1 0.99 9.7 6.8 4.7 3 1 0 3 3 3 0 Homeobox associated leucine zipper DUF1664 PF07889.12 gi|41615162|ref|NP_963660.1| - 1.2 9.2 31.0 0.22 11.6 6.3 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) CENP-F_leu_zip PF10473.9 gi|41615162|ref|NP_963660.1| - 1.3 9.0 56.4 0.12 12.4 16.5 3.2 1 1 1 3 3 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Laminin_II PF06009.12 gi|41615162|ref|NP_963660.1| - 1.5 8.9 26.6 0.14 12.2 2.8 3.2 1 1 2 3 3 3 0 Laminin Domain II DUF4472 PF14739.6 gi|41615162|ref|NP_963660.1| - 2.1 9.1 36.5 2.2 9.0 11.9 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) DUF4201 PF13870.6 gi|41615162|ref|NP_963660.1| - 2.1 8.1 52.6 0.32 10.7 27.2 3.1 1 1 2 3 3 2 0 Domain of unknown function (DUF4201) PI_PP_I PF18363.1 gi|41615162|ref|NP_963660.1| - 3.3 8.0 9.9 1.9 8.7 0.6 3.2 1 1 2 3 3 3 0 Phosphoinositide phosphatase insertion domain MitMem_reg PF13012.6 gi|41615162|ref|NP_963660.1| - 3.4 8.1 15.8 1.1e+02 3.3 0.7 3.4 1 1 1 2 2 1 0 Maintenance of mitochondrial structure and function DUF2935 PF11155.8 gi|41615162|ref|NP_963660.1| - 4.1 7.7 15.3 23 5.3 2.8 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) LPP PF04728.13 gi|41615162|ref|NP_963660.1| - 4.5 7.8 9.7 6.1 7.3 0.3 4.0 3 2 1 4 4 3 0 Lipoprotein leucine-zipper KxDL PF10241.9 gi|41615162|ref|NP_963660.1| - 4.8 7.5 28.2 15 5.9 3.3 5.4 1 1 4 5 5 5 0 Uncharacterized conserved protein FCH PF00611.23 gi|41615162|ref|NP_963660.1| - 4.9 7.5 14.2 3 8.2 9.6 3.0 2 1 0 2 2 1 0 Fes/CIP4, and EFC/F-BAR homology domain TPR_MLP1_2 PF07926.12 gi|41615162|ref|NP_963660.1| - 7.2 6.7 44.7 1.6 8.8 7.8 4.2 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein DUF3800 PF12686.7 gi|41615162|ref|NP_963660.1| - 7.4 7.2 11.4 1.2e+02 3.3 11.4 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) HOOK PF05622.12 gi|41615162|ref|NP_963660.1| - 8 4.5 44.2 1.1e+02 0.8 44.2 2.2 1 1 0 1 1 1 0 HOOK protein DUF16 PF01519.16 gi|41615162|ref|NP_963660.1| - 9.2 6.8 35.2 0.065 13.7 6.0 3.6 1 1 1 3 3 3 0 Protein of unknown function DUF16 Spectrin PF00435.21 gi|41615162|ref|NP_963660.1| - 9.4 6.8 36.5 0.16 12.4 9.4 3.8 3 1 1 4 4 4 0 Spectrin repeat Fer4_13 PF13370.6 gi|41615163|ref|NP_963661.1| - 3.3e-14 53.1 3.2 4.3e-14 52.8 3.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|41615163|ref|NP_963661.1| - 7.7e-13 49.0 4.7 9.6e-13 48.7 4.7 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_6 PF12837.7 gi|41615163|ref|NP_963661.1| - 1.4e-06 28.1 8.8 6.4e-06 26.0 1.9 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|41615163|ref|NP_963661.1| - 9.1e-06 25.3 11.7 0.00032 20.4 3.2 2.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|41615163|ref|NP_963661.1| - 1.1e-05 25.6 3.0 2.9e-05 24.2 0.9 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|41615163|ref|NP_963661.1| - 2.8e-05 24.6 2.9 0.00013 22.4 3.0 1.9 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|41615163|ref|NP_963661.1| - 0.0038 17.6 2.0 0.0055 17.1 2.0 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|41615163|ref|NP_963661.1| - 0.0049 17.0 6.0 0.019 15.1 6.3 1.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|41615163|ref|NP_963661.1| - 0.005 16.9 2.2 0.005 16.9 2.2 2.4 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|41615163|ref|NP_963661.1| - 0.016 15.4 7.6 0.042 14.0 3.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|41615163|ref|NP_963661.1| - 0.041 14.0 3.9 0.14 12.2 3.9 1.7 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_21 PF14697.6 gi|41615163|ref|NP_963661.1| - 0.043 13.9 9.3 0.68 10.1 9.3 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|41615163|ref|NP_963661.1| - 0.17 12.9 8.3 7.5 7.6 3.8 2.2 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|41615163|ref|NP_963661.1| - 5.9 8.1 12.8 11 7.2 5.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Ribosomal_S3Ae PF01015.18 gi|41615164|ref|NP_963662.1| - 8.3e-41 139.8 1.1 1.1e-40 139.4 1.1 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family SPATA1_C PF15743.5 gi|41615164|ref|NP_963662.1| - 0.08 13.0 0.4 0.13 12.3 0.4 1.4 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus SecE PF00584.20 gi|298205313|ref|YP_003717791.1| - 6e-07 29.3 0.1 6.4e-07 29.2 0.1 1.0 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Glyco_hydro_129 PF11308.8 gi|41615165|ref|NP_963663.1| - 0.17 11.0 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases related to GH101 family, GH129 TFIIS_C PF01096.18 gi|41615166|ref|NP_963664.1| - 7.2e-20 70.6 6.7 3.2e-19 68.5 2.1 2.2 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|41615166|ref|NP_963664.1| - 7.2e-09 35.4 6.7 2.1e-06 27.5 0.1 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 gi|41615166|ref|NP_963664.1| - 2e-06 27.6 1.7 0.0021 18.0 0.6 2.3 2 0 0 2 2 2 2 Transposase zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|41615166|ref|NP_963664.1| - 5.8e-05 22.9 4.4 0.026 14.5 2.1 2.7 2 1 0 2 2 2 2 PhnA Zinc-Ribbon DUF2387 PF09526.10 gi|41615166|ref|NP_963664.1| - 0.00014 21.9 1.3 0.013 15.6 0.1 2.2 1 1 1 2 2 2 1 Probable metal-binding protein (DUF2387) Baculo_LEF5_C PF11792.8 gi|41615166|ref|NP_963664.1| - 0.0031 17.2 1.2 0.0031 17.2 1.2 1.9 2 1 0 2 2 1 1 Baculoviridae late expression factor 5 C-terminal domain A2L_zn_ribbon PF08792.10 gi|41615166|ref|NP_963664.1| - 0.0032 17.2 4.9 2.2 8.1 0.1 3.6 4 0 0 4 4 3 1 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|41615166|ref|NP_963664.1| - 0.0032 16.9 8.3 0.73 9.4 0.1 3.0 2 1 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_10 PF10058.9 gi|41615166|ref|NP_963664.1| - 0.0034 17.1 3.6 0.32 10.8 1.7 2.6 2 1 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 gi|41615166|ref|NP_963664.1| - 0.0043 17.0 4.3 0.5 10.4 0.0 2.8 2 1 0 2 2 2 1 Double zinc ribbon Elf1 PF05129.13 gi|41615166|ref|NP_963664.1| - 0.0048 16.9 5.0 0.49 10.5 1.7 2.2 1 1 1 2 2 2 2 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|41615166|ref|NP_963664.1| - 0.0049 17.2 5.7 0.04 14.3 0.6 2.3 2 1 0 2 2 2 1 Restriction alleviation protein Lar zf-Di19 PF05605.12 gi|41615166|ref|NP_963664.1| - 0.0069 16.7 0.3 0.5 10.7 0.0 2.3 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding Zn-ribbon_8 PF09723.10 gi|41615166|ref|NP_963664.1| - 0.015 15.4 6.6 4.1 7.6 0.1 3.4 3 0 0 3 3 3 0 Zinc ribbon domain Vps36-NZF-N PF16988.5 gi|41615166|ref|NP_963664.1| - 0.018 14.4 0.1 5.9 6.4 0.0 2.3 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zinc_ribbon_4 PF13717.6 gi|41615166|ref|NP_963664.1| - 0.03 14.3 5.7 2.8 7.9 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.13 gi|41615166|ref|NP_963664.1| - 0.03 14.0 0.1 0.03 14.0 0.1 2.3 3 0 0 3 3 2 0 InsA N-terminal domain DUF4379 PF14311.6 gi|41615166|ref|NP_963664.1| - 0.031 14.6 5.0 2 8.8 0.1 3.1 3 0 0 3 3 3 0 Probable Zinc-ribbon domain IBR PF01485.21 gi|41615166|ref|NP_963664.1| - 0.037 14.2 6.7 2.8 8.2 0.1 2.6 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Cys_rich_KTR PF14205.6 gi|41615166|ref|NP_963664.1| - 0.038 13.8 4.1 3.6 7.5 0.1 3.1 3 1 0 3 3 3 0 Cysteine-rich KTR DUF3797 PF12677.7 gi|41615166|ref|NP_963664.1| - 0.041 13.8 9.6 0.58 10.1 0.4 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) Ribosomal_S27e PF01667.17 gi|41615166|ref|NP_963664.1| - 0.06 13.1 6.1 0.098 12.4 2.3 2.9 2 1 0 2 2 2 0 Ribosomal protein S27 Auto_anti-p27 PF06677.12 gi|41615166|ref|NP_963664.1| - 0.089 13.0 0.4 0.089 13.0 0.4 2.6 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ZPR1 PF03367.13 gi|41615166|ref|NP_963664.1| - 0.09 12.6 2.0 0.76 9.6 0.4 2.1 2 0 0 2 2 2 0 ZPR1 zinc-finger domain eIF-5_eIF-2B PF01873.17 gi|41615166|ref|NP_963664.1| - 0.1 12.5 4.8 0.26 11.2 0.8 2.1 2 0 0 2 2 2 0 Domain found in IF2B/IF5 zf-Mss51 PF13824.6 gi|41615166|ref|NP_963664.1| - 0.14 12.3 4.8 2.3 8.4 0.9 2.4 1 1 2 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 Stc1 PF12898.7 gi|41615166|ref|NP_963664.1| - 0.15 12.6 4.3 0.54 10.8 4.6 1.7 1 1 1 2 2 2 0 Stc1 domain DUF1178 PF06676.11 gi|41615166|ref|NP_963664.1| - 0.17 12.3 2.6 4.9 7.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1178) FdhE PF04216.12 gi|41615166|ref|NP_963664.1| - 0.17 11.7 2.6 0.3 10.9 2.6 1.4 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation Opy2 PF09463.10 gi|41615166|ref|NP_963664.1| - 0.24 11.8 3.9 1.3 9.4 0.1 2.8 3 0 0 3 3 2 0 Opy2 protein zf-NADH-PPase PF09297.11 gi|41615166|ref|NP_963664.1| - 0.52 10.0 6.5 0.8 9.4 0.2 3.3 3 1 0 3 3 2 0 NADH pyrophosphatase zinc ribbon domain zf-RRN7 PF11781.8 gi|41615166|ref|NP_963664.1| - 0.66 9.7 4.9 15 5.4 0.1 3.1 4 0 0 4 4 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Anti-TRAP PF15777.5 gi|41615166|ref|NP_963664.1| - 0.82 9.7 7.1 0.88 9.6 0.2 2.9 2 2 1 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein OrfB_Zn_ribbon PF07282.11 gi|41615166|ref|NP_963664.1| - 1.2 9.1 7.4 6.1 6.9 0.1 2.9 1 1 2 3 3 3 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.19 gi|41615166|ref|NP_963664.1| - 1.3 8.8 0.1 1.3 8.8 0.1 3.3 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Rubredoxin PF00301.20 gi|41615166|ref|NP_963664.1| - 1.3 9.1 9.6 6.7 6.8 0.2 3.4 3 0 0 3 3 3 0 Rubredoxin Sgf11 PF08209.11 gi|41615166|ref|NP_963664.1| - 2.6 7.7 6.9 16 5.2 0.2 3.1 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) zf-H2C2_2 PF13465.6 gi|41615166|ref|NP_963664.1| - 3.1 8.4 15.5 10 6.7 0.6 3.6 4 0 0 4 4 3 0 Zinc-finger double domain Rad50_zn_hook PF04423.14 gi|41615166|ref|NP_963664.1| - 3.6 7.5 7.3 22 5.0 0.2 2.7 2 1 0 2 2 2 0 Rad50 zinc hook motif Zn_ribbon_SprT PF17283.2 gi|41615166|ref|NP_963664.1| - 3.8 7.5 8.3 26 4.8 0.1 3.0 2 1 0 2 2 2 0 SprT-like zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|41615166|ref|NP_963664.1| - 3.9 7.6 9.7 13 5.9 1.9 3.7 4 1 0 4 4 4 0 NAD-dependent DNA ligase C4 zinc finger domain zf-TFIIB PF13453.6 gi|41615166|ref|NP_963664.1| - 4 6.8 7.4 2.2 7.7 1.9 2.6 2 2 1 3 3 3 0 Transcription factor zinc-finger zinc_ribbon_13 PF09855.9 gi|41615166|ref|NP_963664.1| - 7.5 6.8 8.2 1.2e+02 3.0 3.9 3.1 2 1 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-HIT PF04438.16 gi|41615166|ref|NP_963664.1| - 7.8 6.5 12.1 19 5.2 1.2 3.3 3 0 0 3 3 3 0 HIT zinc finger UPF0547 PF10571.9 gi|41615166|ref|NP_963664.1| - 8.2 6.6 16.2 9 6.5 0.2 3.7 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Lactamase_B_3 PF13483.6 gi|41615167|ref|NP_963665.1| - 1.6e-23 83.4 0.2 2.9e-23 82.5 0.2 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|41615167|ref|NP_963665.1| - 1.6e-20 73.5 0.0 2.5e-20 72.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|41615167|ref|NP_963665.1| - 6.4e-10 39.4 0.2 3.2e-09 37.1 0.2 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|41615167|ref|NP_963665.1| - 0.052 13.0 0.0 0.082 12.3 0.0 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain gerPA PF10676.9 gi|41615167|ref|NP_963665.1| - 0.16 12.2 1.3 6.1 7.2 0.2 2.4 2 0 0 2 2 2 0 Spore germination protein gerPA/gerPF Ribosomal_L19e PF01280.20 gi|41615168|ref|NP_963666.1| - 1.5e-55 187.3 11.4 1.6e-55 187.1 11.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e SIR4_SID PF16991.5 gi|41615168|ref|NP_963666.1| - 0.24 11.5 1.0 3.7 7.6 0.0 2.1 2 0 0 2 2 2 0 Sir4 SID domain RPEL PF02755.15 gi|41615168|ref|NP_963666.1| - 1.6 8.5 6.3 2.6 7.9 0.4 3.2 3 0 0 3 3 3 0 RPEL repeat DUF3825 PF12873.7 gi|41615169|ref|NP_963667.1| - 0.075 12.5 0.9 0.17 11.3 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3825) NDT80_PhoG PF05224.12 gi|41615169|ref|NP_963667.1| - 0.081 13.1 0.0 0.16 12.1 0.0 1.5 1 1 0 1 1 1 0 NDT80 / PhoG like DNA-binding family TMEM43 PF07787.12 gi|41615169|ref|NP_963667.1| - 0.23 10.8 5.4 0.51 9.7 5.4 1.4 1 1 0 1 1 1 0 Transmembrane protein 43 Radical_SAM PF04055.21 gi|41615170|ref|NP_963668.1| - 8.6e-15 55.5 0.0 1.2e-14 55.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|41615170|ref|NP_963668.1| - 3e-10 40.5 0.1 5e-10 39.8 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|41615170|ref|NP_963668.1| - 7.1e-08 32.6 0.1 1.4e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Metallophos PF00149.28 gi|41615171|ref|NP_963669.1| - 5.1e-15 56.5 0.9 9e-15 55.7 0.9 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|41615171|ref|NP_963669.1| - 8.6e-08 32.5 0.0 3.9e-07 30.4 0.0 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Epimerase_2 PF02350.19 gi|41615171|ref|NP_963669.1| - 0.071 12.0 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Wyosine_form PF08608.12 gi|41615172|ref|NP_963670.1| - 1e-24 86.6 0.1 2.8e-24 85.3 0.1 1.8 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|41615172|ref|NP_963670.1| - 3.7e-17 63.2 0.1 3.5e-16 60.0 0.0 2.4 2 1 0 2 2 2 1 Radical SAM superfamily DUF3010 PF11215.8 gi|41615172|ref|NP_963670.1| - 0.13 12.6 0.1 0.27 11.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) HopA1 PF17914.1 gi|41615172|ref|NP_963670.1| - 0.18 11.6 0.0 0.47 10.2 0.0 1.7 1 0 0 1 1 1 0 HopA1 effector protein family SpoU_methylase PF00588.19 gi|41615173|ref|NP_963671.1| - 9.5e-25 87.4 0.1 1.2e-24 87.1 0.1 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 gi|41615173|ref|NP_963671.1| - 0.057 13.3 0.0 0.5 10.2 0.0 2.0 1 1 0 1 1 1 0 SAM-dependent RNA methyltransferase Nitro_FeMo-Co PF02579.17 gi|41615174|ref|NP_963672.1| - 1.9e-09 37.7 0.0 2.5e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Beta_protein PF14350.6 gi|41615174|ref|NP_963672.1| - 0.064 12.7 0.0 0.12 11.7 0.0 1.3 1 1 0 1 1 1 0 Beta protein Prefoldin PF02996.17 gi|41615175|ref|NP_963673.1| - 3.7e-17 62.3 7.6 4.4e-17 62.1 7.6 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF1640 PF07798.11 gi|41615175|ref|NP_963673.1| - 0.0045 17.1 4.7 0.0047 17.0 3.8 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1640) DUF2683 PF10884.8 gi|41615175|ref|NP_963673.1| - 0.012 15.9 5.0 0.012 15.9 5.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) MtrA PF04208.14 gi|41615175|ref|NP_963673.1| - 0.018 14.7 0.9 0.022 14.4 0.9 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A YkyA PF10368.9 gi|41615175|ref|NP_963673.1| - 0.033 13.8 9.3 0.038 13.7 5.1 2.1 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein Prefoldin_2 PF01920.20 gi|41615175|ref|NP_963673.1| - 0.047 13.6 9.4 0.067 13.1 5.3 2.1 2 0 0 2 2 2 0 Prefoldin subunit Fzo_mitofusin PF04799.13 gi|41615175|ref|NP_963673.1| - 0.096 12.2 0.8 1.9 8.1 0.5 2.1 2 0 0 2 2 2 0 fzo-like conserved region MADF_DNA_bdg PF10545.9 gi|41615175|ref|NP_963673.1| - 0.1 12.9 0.4 0.23 11.8 0.4 1.5 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Fib_alpha PF08702.10 gi|41615175|ref|NP_963673.1| - 0.2 11.8 4.6 0.2 11.8 2.4 1.8 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family CdvA PF18822.1 gi|41615175|ref|NP_963673.1| - 0.21 11.4 10.5 0.22 11.3 7.0 2.1 2 0 0 2 2 2 0 CdvA-like coiled-coil domain DUF948 PF06103.11 gi|41615175|ref|NP_963673.1| - 0.23 11.7 2.2 0.38 11.0 1.4 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 gi|41615175|ref|NP_963673.1| - 0.27 11.6 6.1 0.12 12.8 2.6 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Herpes_BLRF2 PF05812.12 gi|41615175|ref|NP_963673.1| - 0.99 9.6 5.1 2.6 8.2 5.1 1.7 1 1 0 1 1 1 0 Herpesvirus BLRF2 protein BLOC1_2 PF10046.9 gi|41615175|ref|NP_963673.1| - 1 9.7 9.4 5.6 7.3 2.6 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Helicase_C PF00271.31 gi|41615176|ref|NP_963674.1| - 5.1e-29 100.9 1.2 1.2e-26 93.2 0.3 3.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|41615176|ref|NP_963674.1| - 3.4e-24 85.7 11.6 1.5e-23 83.6 0.0 3.8 3 1 1 4 4 4 1 Type III restriction enzyme, res subunit ERCC4 PF02732.15 gi|41615176|ref|NP_963674.1| - 1.2e-20 74.3 0.2 4.2e-20 72.5 0.2 2.0 1 0 0 1 1 1 1 ERCC4 domain DEAD PF00270.29 gi|41615176|ref|NP_963674.1| - 2.9e-17 63.0 2.6 9.9e-17 61.3 0.0 3.0 3 1 1 4 4 4 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 gi|41615176|ref|NP_963674.1| - 3.9e-06 26.7 3.6 0.00034 20.3 0.0 2.5 2 0 0 2 2 2 2 SWI2/SNF2 ATPase HHH_2 PF12826.7 gi|41615176|ref|NP_963674.1| - 7.1e-05 22.8 0.0 0.00029 20.9 0.0 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|41615176|ref|NP_963674.1| - 0.00022 21.8 0.5 0.00022 21.8 0.5 3.3 4 0 0 4 4 4 1 Helix-hairpin-helix domain SNF2_N PF00176.23 gi|41615176|ref|NP_963674.1| - 0.00048 19.0 0.0 0.0011 17.7 0.0 1.8 1 1 0 1 1 1 1 SNF2 family N-terminal domain 5_3_exonuc PF01367.20 gi|41615176|ref|NP_963674.1| - 0.00058 20.4 0.1 0.00058 20.4 0.1 3.9 3 1 2 5 5 5 1 5'-3' exonuclease, C-terminal SAM fold DUF2075 PF09848.9 gi|41615176|ref|NP_963674.1| - 0.0024 17.2 0.3 0.013 14.7 0.0 2.4 2 2 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Ribosomal_S5_C PF03719.15 gi|41615177|ref|NP_963675.1| - 2.2e-23 81.5 0.0 3.8e-23 80.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|41615177|ref|NP_963675.1| - 9.8e-17 60.7 0.8 2.2e-16 59.6 0.8 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain tRNA-synt_1b PF00579.25 gi|41615178|ref|NP_963676.1| - 7.1e-40 137.1 1.4 1.4e-39 136.2 1.4 1.4 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) RPW8 PF05659.11 gi|41615180|ref|NP_963678.1| - 0.52 10.0 3.7 10 5.8 0.2 3.5 3 0 0 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 EFP_N PF08207.12 gi|41615181|ref|NP_963679.1| - 1e-06 28.6 0.7 1.8e-06 27.9 0.2 1.7 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain GTP_EFTU_D2 PF03144.25 gi|41615181|ref|NP_963679.1| - 0.31 11.5 5.1 1.2 9.6 0.0 2.9 1 1 1 2 2 2 0 Elongation factor Tu domain 2 GAD PF02938.14 gi|41615182|ref|NP_963680.1| - 1.7e-06 28.1 0.2 1.7e-06 28.1 0.2 2.5 3 0 0 3 3 3 1 GAD domain PapJ PF14855.6 gi|41615182|ref|NP_963680.1| - 0.017 14.9 0.1 3.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Pilus-assembly fibrillin subunit, chaperone DNA_primase_lrg PF04104.14 gi|41615183|ref|NP_963681.1| - 4.2e-10 39.5 0.9 5e-10 39.2 0.2 1.4 2 0 0 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit DNA_primase_S PF01896.19 gi|41615183|ref|NP_963681.1| - 2.3e-06 27.8 0.5 6.6e-06 26.3 0.1 2.0 2 1 0 2 2 2 1 DNA primase small subunit PriCT_1 PF08708.11 gi|41615183|ref|NP_963681.1| - 0.02 14.6 0.0 0.047 13.4 0.0 1.6 2 0 0 2 2 2 0 Primase C terminal 1 (PriCT-1) Ribosomal_L21e PF01157.18 gi|41615184|ref|NP_963682.1| - 3.7e-31 107.0 0.8 5.4e-31 106.5 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein L21e HhH-GPD PF00730.25 gi|41615185|ref|NP_963683.1| - 8.4e-20 71.2 0.1 1.3e-19 70.6 0.1 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein DpnII PF04556.12 gi|41615185|ref|NP_963683.1| - 0.0018 17.7 0.4 0.0026 17.1 0.4 1.2 1 0 0 1 1 1 1 DpnII restriction endonuclease EndIII_4Fe-2S PF10576.9 gi|41615185|ref|NP_963683.1| - 0.0041 17.4 3.8 0.0084 16.4 3.8 1.6 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III DUF2400 PF09674.10 gi|41615185|ref|NP_963683.1| - 0.066 13.2 0.0 0.29 11.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Peptidase_M24 PF00557.24 gi|41615186|ref|NP_963684.1| - 9.4e-30 103.9 0.0 1.1e-29 103.6 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C2HC5 PF06221.13 gi|298205314|ref|YP_003717792.1| - 0.00033 20.6 0.3 0.00041 20.3 0.3 1.1 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type DNA_RNApol_7kD PF03604.13 gi|298205314|ref|YP_003717792.1| - 0.00037 20.1 2.6 0.00052 19.6 2.6 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Zn_ribbon_SprT PF17283.2 gi|298205314|ref|YP_003717792.1| - 0.0019 18.1 2.4 0.0087 15.9 2.4 1.9 1 1 0 1 1 1 1 SprT-like zinc ribbon domain zinc_ribbon_9 PF14369.6 gi|298205314|ref|YP_003717792.1| - 0.0026 18.0 0.5 0.0035 17.6 0.5 1.2 1 0 0 1 1 1 1 zinc-ribbon DZR PF12773.7 gi|298205314|ref|YP_003717792.1| - 0.0042 17.1 0.5 0.0055 16.7 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|298205314|ref|YP_003717792.1| - 0.005 16.9 0.3 0.0052 16.8 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 gi|298205314|ref|YP_003717792.1| - 0.0056 16.5 0.9 0.0073 16.1 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 gi|298205314|ref|YP_003717792.1| - 0.0097 16.0 2.8 0.017 15.3 2.8 1.5 1 1 0 1 1 1 1 Zinc ribbon domain Sgf11 PF08209.11 gi|298205314|ref|YP_003717792.1| - 0.012 15.1 2.7 0.05 13.2 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-ribbon_3 PF13248.6 gi|298205314|ref|YP_003717792.1| - 0.013 14.9 2.1 1.1 8.7 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|298205314|ref|YP_003717792.1| - 0.017 15.0 1.5 2.9 7.9 0.0 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 gi|298205314|ref|YP_003717792.1| - 0.026 14.3 5.2 0.078 12.7 5.2 1.8 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|298205314|ref|YP_003717792.1| - 0.031 13.8 2.6 0.75 9.4 0.2 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding RNHCP PF12647.7 gi|298205314|ref|YP_003717792.1| - 0.036 14.0 0.3 0.037 14.0 0.3 1.1 1 0 0 1 1 1 0 RNHCP domain TerY_C PF15616.6 gi|298205314|ref|YP_003717792.1| - 0.039 14.1 0.1 0.039 14.1 0.1 1.0 1 0 0 1 1 1 0 TerY-C metal binding domain zf-C2H2 PF00096.26 gi|298205314|ref|YP_003717792.1| - 0.066 13.7 6.2 0.41 11.2 0.9 2.3 2 1 0 2 2 2 0 Zinc finger, C2H2 type DiS_P_DiS PF06750.13 gi|298205314|ref|YP_003717792.1| - 0.083 13.0 1.2 0.7 10.1 0.2 1.9 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain NRDD PF13597.6 gi|298205314|ref|YP_003717792.1| - 0.13 11.0 0.3 0.12 11.1 0.3 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zf-C2H2_4 PF13894.6 gi|298205314|ref|YP_003717792.1| - 0.14 13.0 0.3 0.14 13.0 0.3 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf_UBZ PF18439.1 gi|298205314|ref|YP_003717792.1| - 0.32 10.6 1.1 4.7 6.9 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-RING_7 PF02591.15 gi|298205314|ref|YP_003717792.1| - 0.45 10.7 3.9 4.2 7.6 0.2 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-C2HC_2 PF13913.6 gi|298205314|ref|YP_003717792.1| - 4 7.5 8.8 20 5.2 0.7 3.0 3 0 0 3 3 3 0 zinc-finger of a C2HC-type AAA_3 PF07726.11 gi|41615187|ref|NP_963685.1| - 4e-25 88.2 0.0 5.5e-21 74.8 0.0 2.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|41615187|ref|NP_963685.1| - 1.7e-19 70.1 0.6 6.3e-08 32.2 0.0 3.4 3 1 1 4 4 4 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|41615187|ref|NP_963685.1| - 4.3e-19 68.9 0.0 9.7e-13 48.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|41615187|ref|NP_963685.1| - 9.8e-11 41.6 0.0 1.7e-07 31.1 0.0 2.2 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_lid_2 PF17863.1 gi|41615187|ref|NP_963685.1| - 4.3e-09 36.1 0.0 7.1e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 gi|41615187|ref|NP_963685.1| - 5.8e-09 36.5 0.0 3e-08 34.1 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|41615187|ref|NP_963685.1| - 1.8e-08 34.7 0.0 5.3e-07 29.9 0.0 2.6 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|41615187|ref|NP_963685.1| - 6.5e-08 32.5 0.0 0.00091 19.0 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 gi|41615187|ref|NP_963685.1| - 2.1e-07 30.3 0.0 0.0021 17.2 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain AAA_PrkA PF08298.11 gi|41615187|ref|NP_963685.1| - 5.6e-07 28.8 0.0 2.2e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 PrkA AAA domain AAA_16 PF13191.6 gi|41615187|ref|NP_963685.1| - 4.3e-05 24.0 0.0 0.00048 20.5 0.0 2.4 2 1 0 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 gi|41615187|ref|NP_963685.1| - 7.9e-05 23.2 0.0 0.00021 21.8 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_24 PF13479.6 gi|41615187|ref|NP_963685.1| - 0.00084 19.1 0.1 0.0017 18.1 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|41615187|ref|NP_963685.1| - 0.00087 19.6 0.0 0.0043 17.3 0.0 2.1 3 0 0 3 3 2 1 AAA domain Rad17 PF03215.15 gi|41615187|ref|NP_963685.1| - 0.0047 16.9 0.0 0.0096 15.9 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain NACHT PF05729.12 gi|41615187|ref|NP_963685.1| - 0.0053 16.7 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 gi|41615187|ref|NP_963685.1| - 0.0074 16.5 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|41615187|ref|NP_963685.1| - 0.0079 16.5 0.0 0.051 13.9 0.0 2.2 3 0 0 3 3 3 1 AAA domain AAA_18 PF13238.6 gi|41615187|ref|NP_963685.1| - 0.0086 16.6 0.0 0.067 13.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|41615187|ref|NP_963685.1| - 0.01 15.1 0.0 0.025 13.8 0.0 1.7 2 0 0 2 2 2 1 TIP49 P-loop domain NTPase_1 PF03266.15 gi|41615187|ref|NP_963685.1| - 0.014 15.3 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 NTPase IstB_IS21 PF01695.17 gi|41615187|ref|NP_963685.1| - 0.014 15.1 0.0 0.045 13.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_14 PF13173.6 gi|41615187|ref|NP_963685.1| - 0.014 15.4 2.3 1.7 8.7 0.0 3.5 4 0 0 4 4 4 0 AAA domain AAA_7 PF12775.7 gi|41615187|ref|NP_963685.1| - 0.018 14.6 0.0 0.076 12.5 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|41615187|ref|NP_963685.1| - 0.021 14.0 0.0 0.038 13.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_11 PF13086.6 gi|41615187|ref|NP_963685.1| - 0.029 14.2 0.0 0.048 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|41615187|ref|NP_963685.1| - 0.037 14.3 0.0 0.09 13.0 0.0 1.6 2 0 0 2 2 1 0 AAA domain RsgA_GTPase PF03193.16 gi|41615187|ref|NP_963685.1| - 0.037 13.9 0.0 0.086 12.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|41615187|ref|NP_963685.1| - 0.038 13.7 0.0 0.067 12.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain RNA_helicase PF00910.22 gi|41615187|ref|NP_963685.1| - 0.043 14.2 0.0 0.091 13.2 0.0 1.6 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.23 gi|41615187|ref|NP_963685.1| - 0.078 13.1 0.0 0.21 11.7 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|41615187|ref|NP_963685.1| - 0.079 13.0 0.1 0.54 10.3 0.0 2.2 1 1 1 2 2 2 0 Helicase HerA, central domain ATPase_2 PF01637.18 gi|41615187|ref|NP_963685.1| - 0.085 12.8 2.0 1.2 8.9 0.0 2.5 2 2 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_17 PF13207.6 gi|41615187|ref|NP_963685.1| - 0.11 12.9 0.5 1.4 9.3 0.1 2.8 2 1 1 3 3 3 0 AAA domain TsaE PF02367.17 gi|41615187|ref|NP_963685.1| - 0.14 12.2 0.0 0.45 10.5 0.0 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activ_2 PF14532.6 gi|41615187|ref|NP_963685.1| - 0.17 12.0 0.0 18 5.4 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_30 PF13604.6 gi|41615187|ref|NP_963685.1| - 0.17 11.6 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain VWA PF00092.28 gi|41615188|ref|NP_963686.1| - 1.2e-11 45.1 0.1 1.9e-11 44.6 0.1 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|41615188|ref|NP_963686.1| - 3.5e-10 40.5 0.0 6e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|41615188|ref|NP_963686.1| - 1.8e-07 30.8 0.0 4.1e-07 29.6 0.0 1.5 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein DUF58 PF01882.18 gi|41615188|ref|NP_963686.1| - 0.065 13.5 0.0 0.2 11.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF58 DS PF01916.17 gi|41615189|ref|NP_963687.1| - 6e-94 314.5 0.0 7.3e-94 314.2 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase DUF4384 PF14326.6 gi|41615190|ref|NP_963688.1| - 0.017 15.3 0.4 1.3 9.2 0.1 3.7 4 1 0 4 4 4 0 Domain of unknown function (DUF4384) DUF19 PF01579.18 gi|41615190|ref|NP_963688.1| - 3.1 7.6 8.0 0.16 11.7 0.6 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF19) EIF_2_alpha PF07541.12 gi|41615191|ref|NP_963689.1| - 7.1e-18 64.8 3.0 1.1e-17 64.2 2.2 1.7 1 1 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|41615191|ref|NP_963689.1| - 4.5e-06 26.9 0.1 9.9e-06 25.8 0.1 1.6 1 0 0 1 1 1 1 S1 RNA binding domain Utp12 PF04003.12 gi|41615191|ref|NP_963689.1| - 0.089 13.1 0.1 0.54 10.6 0.0 2.1 2 0 0 2 2 2 0 Dip2/Utp12 Family HEPN PF05168.14 gi|41615191|ref|NP_963689.1| - 3.1 8.0 9.1 0.78 9.9 1.8 2.4 1 1 1 2 2 2 0 HEPN domain PPDK_N PF01326.19 gi|41615192|ref|NP_963690.1| - 5.2e-13 49.0 0.2 0.00038 19.8 0.0 3.2 1 1 2 3 3 3 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|41615192|ref|NP_963690.1| - 6.6e-05 22.6 0.0 0.0004 20.0 0.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain DUF1611 PF07755.11 gi|41615193|ref|NP_963691.1| - 0.022 14.0 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain Pox_A_type_inc PF04508.12 gi|41615193|ref|NP_963691.1| - 0.3 11.0 2.9 1.4 8.8 0.5 2.4 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF4396 PF14342.6 gi|41615194|ref|NP_963692.1| - 9.9 6.5 12.2 8.8 6.7 0.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4396) DEAD_assoc PF08494.11 gi|41615195|ref|NP_963693.1| - 1.1e-51 175.4 0.0 1.3e-51 175.1 0.0 1.1 1 0 0 1 1 1 1 DEAD/H associated BCAS3 PF12490.8 gi|41615195|ref|NP_963693.1| - 0.042 13.4 0.2 0.065 12.8 0.2 1.2 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 V_ATPase_I PF01496.19 gi|41615196|ref|NP_963694.1| - 6.2e-25 87.3 8.0 4.6e-15 54.7 1.1 2.3 2 0 0 2 2 2 2 V-type ATPase 116kDa subunit family DUF1854 PF08909.11 gi|41615196|ref|NP_963694.1| - 0.025 14.4 0.7 0.33 10.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) DUF3634 PF12321.8 gi|41615196|ref|NP_963694.1| - 0.059 13.8 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3634) DUF2975 PF11188.8 gi|41615196|ref|NP_963694.1| - 7.3 6.5 12.5 0.085 12.7 3.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) Retrotran_gag_2 PF14223.6 gi|41615197|ref|NP_963695.1| - 0.0044 16.7 0.6 0.0048 16.6 0.6 1.2 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type DUF4911 PF16256.5 gi|41615197|ref|NP_963695.1| - 0.04 13.9 0.1 0.21 11.6 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4911) RNA_pol_Rpb4 PF03874.16 gi|41615197|ref|NP_963695.1| - 0.058 13.7 2.3 0.12 12.8 2.4 1.6 1 1 0 1 1 1 0 RNA polymerase Rpb4 SE PF08491.10 gi|41615197|ref|NP_963695.1| - 0.085 11.9 0.0 0.1 11.6 0.0 1.2 1 0 0 1 1 1 0 Squalene epoxidase Peptidase_M17 PF00883.21 gi|41615198|ref|NP_963696.1| - 1.8e-103 346.1 0.0 2.2e-103 345.8 0.0 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 gi|41615198|ref|NP_963696.1| - 0.042 13.7 0.0 0.11 12.3 0.0 1.7 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain Phage_holin_2_2 PF10746.9 gi|41615199|ref|NP_963697.1| - 0.15 11.8 0.8 0.38 10.4 0.2 1.9 1 1 1 2 2 2 0 Phage holin T7 family, holin superfamily II Staph_haemo PF05480.11 gi|41615200|ref|NP_963698.1| - 0.25 11.2 3.7 0.21 11.4 1.7 2.0 2 0 0 2 2 2 0 Staphylococcus haemolytic protein DHHC PF01529.20 gi|41615200|ref|NP_963698.1| - 3.4 7.8 11.5 1.6 8.9 1.8 2.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase NVEALA PF14055.6 gi|41615200|ref|NP_963698.1| - 4.3 7.4 5.4 7.5 6.6 0.1 3.0 3 0 0 3 3 3 0 NVEALA protein CbtB PF09489.10 gi|41615200|ref|NP_963698.1| - 4.9 7.3 7.4 4.7 7.4 0.0 3.3 2 1 1 3 3 3 0 Probable cobalt transporter subunit (CbtB) Lon_C PF05362.13 gi|41615201|ref|NP_963699.1| - 3.2e-08 33.4 0.0 6.5e-08 32.4 0.0 1.5 1 1 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Ribosomal_S9 PF00380.19 gi|41615201|ref|NP_963699.1| - 0.022 15.3 0.0 0.043 14.4 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein S9/S16 SBP_bac_3 PF00497.20 gi|41615202|ref|NP_963700.1| - 0.0083 15.6 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF2116 PF09889.9 gi|41615202|ref|NP_963700.1| - 0.15 12.0 1.2 8.7 6.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) RNA_pol_N PF01194.17 gi|41615202|ref|NP_963700.1| - 0.16 12.3 1.7 0.29 11.5 0.2 2.3 2 1 0 2 2 2 0 RNA polymerases N / 8 kDa subunit HGTP_anticodon PF03129.20 gi|41615203|ref|NP_963701.1| - 1.5e-23 82.7 0.1 3.9e-23 81.4 0.1 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|41615203|ref|NP_963701.1| - 1.7e-15 57.5 0.1 1.4e-09 38.2 0.1 2.4 1 1 0 2 2 2 2 tRNA synthetase class II core domain (G, H, P, S and T) Cas_Cas2CT1978 PF09707.10 gi|41615204|ref|NP_963702.1| - 0.19 11.8 0.0 0.43 10.7 0.0 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Plasmid_parti PF01672.16 gi|41615204|ref|NP_963702.1| - 7 7.4 8.9 19 6.0 1.2 3.5 3 0 0 3 3 3 0 Putative plasmid partition protein PolC_DP2 PF03833.13 gi|41615205|ref|NP_963703.1| - 0 1113.5 1.2 0 1113.5 1.2 1.4 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 gi|41615205|ref|NP_963703.1| - 0.025 14.5 4.3 1.7 8.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbons Nop10p PF04135.12 gi|41615205|ref|NP_963703.1| - 0.032 14.3 8.9 0.027 14.5 3.4 2.6 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family HypA PF01155.19 gi|41615205|ref|NP_963703.1| - 0.036 14.1 5.7 0.38 10.8 0.3 2.6 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_3 PF01381.22 gi|41615205|ref|NP_963703.1| - 0.052 13.6 0.0 0.25 11.4 0.0 2.2 1 0 0 1 1 1 0 Helix-turn-helix NRDD PF13597.6 gi|41615205|ref|NP_963703.1| - 0.13 11.0 9.3 0.12 11.1 4.0 2.3 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase DUF1272 PF06906.11 gi|41615205|ref|NP_963703.1| - 0.23 11.6 7.6 0.089 12.9 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Zn-ribbon_8 PF09723.10 gi|41615205|ref|NP_963703.1| - 1.8 8.7 10.4 0.064 13.4 0.8 2.6 2 0 0 2 2 2 0 Zinc ribbon domain DUF2072 PF09845.9 gi|41615205|ref|NP_963703.1| - 3.4 7.9 5.7 0.79 10.0 0.2 2.4 2 0 0 2 2 2 0 Zn-ribbon containing protein Laminin_I PF06008.14 gi|41615206|ref|NP_963704.1| - 0.08 12.6 2.4 0.11 12.2 2.4 1.1 1 0 0 1 1 1 0 Laminin Domain I Sld5 PF05916.11 gi|41615206|ref|NP_963704.1| - 0.082 13.4 1.6 0.1 13.1 0.9 1.6 2 0 0 2 2 2 0 GINS complex protein ABC_tran PF00005.27 gi|41615207|ref|NP_963705.1| - 1.7e-35 122.6 0.0 2.6e-35 121.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|41615207|ref|NP_963705.1| - 1.6e-12 47.8 0.4 6.1e-08 32.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|41615207|ref|NP_963705.1| - 1.7e-07 30.9 0.2 4.1e-05 23.1 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|41615207|ref|NP_963705.1| - 3.1e-05 23.9 3.9 0.094 12.4 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|41615207|ref|NP_963705.1| - 0.00044 19.9 0.1 0.00096 18.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|41615207|ref|NP_963705.1| - 0.0015 18.8 0.0 0.037 14.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|41615207|ref|NP_963705.1| - 0.0017 18.9 0.1 0.0045 17.5 0.1 1.6 2 0 0 2 2 1 1 AAA domain AAA_13 PF13166.6 gi|41615207|ref|NP_963705.1| - 0.0026 16.5 0.0 0.28 9.8 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|41615207|ref|NP_963705.1| - 0.0071 16.7 0.0 0.0096 16.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|41615207|ref|NP_963705.1| - 0.0072 16.2 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase cobW PF02492.19 gi|41615207|ref|NP_963705.1| - 0.012 15.2 0.1 0.02 14.5 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PhoH PF02562.16 gi|41615207|ref|NP_963705.1| - 0.019 14.4 0.0 0.033 13.6 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_33 PF13671.6 gi|41615207|ref|NP_963705.1| - 0.031 14.4 0.1 0.1 12.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain Zot PF05707.12 gi|41615207|ref|NP_963705.1| - 0.032 13.9 0.0 0.42 10.2 0.0 2.1 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) T2SSE PF00437.20 gi|41615207|ref|NP_963705.1| - 0.037 13.1 0.0 0.072 12.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 gi|41615207|ref|NP_963705.1| - 0.039 13.7 0.2 0.13 12.0 0.1 1.8 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|41615207|ref|NP_963705.1| - 0.046 13.6 0.2 0.099 12.5 0.1 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|41615207|ref|NP_963705.1| - 0.047 13.3 0.0 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|41615207|ref|NP_963705.1| - 0.052 12.7 0.1 0.17 11.1 0.1 1.7 2 0 0 2 2 2 0 NB-ARC domain AAA_18 PF13238.6 gi|41615207|ref|NP_963705.1| - 0.082 13.5 0.0 0.92 10.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|41615207|ref|NP_963705.1| - 0.097 12.4 0.0 0.57 9.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|41615207|ref|NP_963705.1| - 0.1 11.9 0.1 2.8 7.2 0.0 2.1 2 0 0 2 2 2 0 KaiC MobB PF03205.14 gi|41615207|ref|NP_963705.1| - 0.12 12.2 0.9 1 9.2 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B G-alpha PF00503.20 gi|41615207|ref|NP_963705.1| - 0.14 11.3 0.0 0.18 10.9 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit MMR_HSR1 PF01926.23 gi|41615207|ref|NP_963705.1| - 0.16 12.1 0.9 0.77 9.9 0.9 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase TP_methylase PF00590.20 gi|41615208|ref|NP_963706.1| - 6.5e-13 49.1 0.0 8.2e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF3963 PF13124.6 gi|41615208|ref|NP_963706.1| - 0.058 13.4 1.9 0.11 12.5 1.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) Hjc PF01870.18 gi|41615209|ref|NP_963707.1| - 2.1e-22 78.9 0.1 2.7e-22 78.6 0.1 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Phlebovirus_G1 PF07243.11 gi|41615209|ref|NP_963707.1| - 0.1 10.9 0.0 0.11 10.8 0.0 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 ThiI PF02568.14 gi|41615210|ref|NP_963708.1| - 1.1e-33 116.5 0.0 1.6e-33 116.0 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|41615210|ref|NP_963708.1| - 2.8e-21 76.1 5.3 6.7e-21 74.9 3.2 2.4 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|41615210|ref|NP_963708.1| - 1.8e-05 24.3 0.1 0.22 11.0 0.0 2.7 3 0 0 3 3 3 2 Queuosine biosynthesis protein QueC Bmp PF02608.14 gi|41615210|ref|NP_963708.1| - 0.00016 20.8 0.0 0.00038 19.5 0.0 1.6 1 0 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like T2SSE PF00437.20 gi|41615211|ref|NP_963709.1| - 2.5e-35 121.9 0.0 3.9e-35 121.2 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|41615211|ref|NP_963709.1| - 0.0033 18.0 0.0 0.0072 16.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|41615211|ref|NP_963709.1| - 0.0037 17.7 0.0 0.0086 16.5 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|41615211|ref|NP_963709.1| - 0.056 13.5 0.1 0.29 11.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|41615211|ref|NP_963709.1| - 0.058 13.0 0.1 0.35 10.4 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 gi|41615211|ref|NP_963709.1| - 0.078 12.5 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 gi|41615211|ref|NP_963709.1| - 0.089 12.7 0.0 0.31 10.9 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 gi|41615211|ref|NP_963709.1| - 0.092 13.2 0.1 0.092 13.2 0.1 3.4 3 1 0 3 3 3 0 AAA domain AAA_29 PF13555.6 gi|41615211|ref|NP_963709.1| - 0.14 11.9 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|41615211|ref|NP_963709.1| - 0.21 11.1 0.1 0.42 10.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain Rad51 PF08423.11 gi|41615212|ref|NP_963710.1| - 5.2e-89 297.9 0.0 6.2e-89 297.6 0.0 1.0 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|41615212|ref|NP_963710.1| - 4.4e-15 56.0 1.4 4.4e-15 56.0 1.4 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|41615212|ref|NP_963710.1| - 4.6e-12 45.1 2.1 2.5e-05 23.9 0.0 3.1 3 0 0 3 3 3 2 Helix-hairpin-helix motif AAA_25 PF13481.6 gi|41615212|ref|NP_963710.1| - 1.7e-11 44.1 0.0 2.6e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.21 gi|41615212|ref|NP_963710.1| - 3.9e-08 33.1 0.1 6e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_2 PF12826.7 gi|41615212|ref|NP_963710.1| - 5.2e-08 32.9 0.1 1.4e-07 31.5 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif ATPase PF06745.13 gi|41615212|ref|NP_963710.1| - 7.5e-08 32.0 0.1 1.9e-07 30.7 0.1 1.7 1 1 0 1 1 1 1 KaiC HHH_3 PF12836.7 gi|41615212|ref|NP_963710.1| - 3.4e-06 27.2 0.2 0.044 14.1 0.1 3.1 2 1 1 3 3 3 2 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|41615212|ref|NP_963710.1| - 0.00012 21.9 0.0 0.0031 17.3 0.0 2.9 2 1 1 3 3 2 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|41615212|ref|NP_963710.1| - 0.0002 21.5 0.0 0.0093 16.2 0.0 2.5 1 1 1 2 2 2 1 Pathogenicity locus 5_3_exonuc PF01367.20 gi|41615212|ref|NP_963710.1| - 0.00026 21.5 0.9 0.0047 17.5 0.9 2.7 1 1 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold IMS_HHH PF11798.8 gi|41615212|ref|NP_963710.1| - 0.00068 19.8 0.0 0.0029 17.8 0.0 2.1 1 0 0 1 1 1 1 IMS family HHH motif BAF PF02961.14 gi|41615212|ref|NP_963710.1| - 0.00088 19.7 0.0 0.0024 18.3 0.0 1.7 1 0 0 1 1 1 1 Barrier to autointegration factor AAA_24 PF13479.6 gi|41615212|ref|NP_963710.1| - 0.0017 18.1 0.0 0.0034 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain HHH_8 PF14716.6 gi|41615212|ref|NP_963710.1| - 0.0056 17.0 1.3 1.8 9.0 0.0 3.0 3 0 0 3 3 3 1 Helix-hairpin-helix domain DEK_C PF08766.11 gi|41615212|ref|NP_963710.1| - 0.012 15.5 0.1 0.039 13.9 0.1 1.9 1 0 0 1 1 1 0 DEK C terminal domain RNA_pol_Rpb1_5 PF04998.17 gi|41615213|ref|NP_963711.1| - 2.9e-47 161.4 6.4 8.3e-47 159.8 6.4 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF348 PF03990.14 gi|41615213|ref|NP_963711.1| - 0.16 11.7 0.6 1.4 8.7 0.1 2.4 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain YokU PF14122.6 gi|41615213|ref|NP_963711.1| - 0.84 9.7 3.8 0.64 10.0 0.4 2.5 2 1 0 2 2 2 0 YokU-like protein, putative antitoxin CRS1_YhbY PF01985.21 gi|41615214|ref|NP_963712.1| - 5.9e-13 48.8 2.7 7.2e-13 48.5 2.7 1.1 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain FKBP_N_2 PF18023.1 gi|41615214|ref|NP_963712.1| - 0.0044 17.1 0.2 0.0053 16.8 0.2 1.2 1 0 0 1 1 1 1 BDBT FKBP like N-terminal DUF5305 PF17231.2 gi|41615214|ref|NP_963712.1| - 0.0087 15.5 0.6 0.011 15.2 0.6 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Lant_dehydr_N PF04738.13 gi|41615214|ref|NP_963712.1| - 0.059 11.5 0.0 0.063 11.4 0.0 1.0 1 0 0 1 1 1 0 Lantibiotic dehydratase, N terminus FOP_dimer PF09398.10 gi|41615215|ref|NP_963713.1| - 0.0014 18.9 0.6 0.0014 18.9 0.6 1.8 2 0 0 2 2 2 1 FOP N terminal dimerisation domain CemA PF03040.14 gi|41615215|ref|NP_963713.1| - 0.014 15.3 1.3 0.017 15.1 1.3 1.2 1 0 0 1 1 1 0 CemA family UxaE PF16257.5 gi|41615215|ref|NP_963713.1| - 0.017 13.8 4.4 0.02 13.6 4.4 1.1 1 0 0 1 1 1 0 tagaturonate epimerase DUF3539 PF12058.8 gi|41615215|ref|NP_963713.1| - 0.067 13.3 1.5 0.2 11.8 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3539) Ovate PF04844.13 gi|41615215|ref|NP_963713.1| - 0.12 12.4 0.5 4.1 7.5 0.1 2.3 2 0 0 2 2 2 0 Transcriptional repressor, ovate Glucosaminidase PF01832.20 gi|41615215|ref|NP_963713.1| - 0.12 12.9 5.1 0.27 11.7 5.1 1.6 1 1 0 1 1 1 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MIT PF04212.18 gi|41615215|ref|NP_963713.1| - 0.75 9.9 4.9 0.9 9.6 1.3 2.7 3 1 0 3 3 3 0 MIT (microtubule interacting and transport) domain ScsC_N PF18312.1 gi|41615215|ref|NP_963713.1| - 1.7 8.5 6.4 1.9 8.4 0.1 3.6 4 0 0 4 4 4 0 Copper resistance protein ScsC N-terminal domain AAA PF00004.29 gi|41615216|ref|NP_963714.1| - 1.6e-15 57.7 0.0 3.6e-15 56.6 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta PF06144.13 gi|41615216|ref|NP_963714.1| - 3.1e-07 30.3 2.3 4e-06 26.7 0.0 2.9 3 0 0 3 3 3 1 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|41615216|ref|NP_963714.1| - 2.2e-06 27.5 0.0 5.3e-06 26.3 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|41615216|ref|NP_963714.1| - 3.5e-06 26.4 0.6 7.5e-06 25.3 0.0 1.8 3 0 0 3 3 3 1 Protein of unknown function (DUF815) Rad17 PF03215.15 gi|41615216|ref|NP_963714.1| - 2.4e-05 24.4 0.3 0.00011 22.2 0.0 2.2 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|41615216|ref|NP_963714.1| - 5.3e-05 23.2 0.1 0.0038 17.3 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|41615216|ref|NP_963714.1| - 0.00012 22.3 0.0 0.0024 18.2 0.0 2.7 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|41615216|ref|NP_963714.1| - 0.00014 21.2 0.0 0.0006 19.1 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_6 PF12774.7 gi|41615216|ref|NP_963714.1| - 0.00026 20.1 0.0 0.00046 19.3 0.0 1.4 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_5 PF07728.14 gi|41615216|ref|NP_963714.1| - 0.00029 20.8 0.0 0.00095 19.2 0.0 2.0 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|41615216|ref|NP_963714.1| - 0.00045 20.6 0.0 0.0011 19.4 0.0 1.7 2 0 0 2 2 1 1 AAA ATPase domain AAA_11 PF13086.6 gi|41615216|ref|NP_963714.1| - 0.00049 20.0 0.0 0.0032 17.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_assoc_2 PF16193.5 gi|41615216|ref|NP_963714.1| - 0.0012 19.1 0.0 0.0033 17.7 0.0 1.8 1 0 0 1 1 1 1 AAA C-terminal domain IstB_IS21 PF01695.17 gi|41615216|ref|NP_963714.1| - 0.0053 16.5 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein RFC1 PF08519.12 gi|41615216|ref|NP_963714.1| - 0.0078 16.4 0.1 0.017 15.3 0.1 1.5 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain AAA_24 PF13479.6 gi|41615216|ref|NP_963714.1| - 0.008 15.9 0.0 0.015 15.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|41615216|ref|NP_963714.1| - 0.008 16.3 0.0 0.014 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|41615216|ref|NP_963714.1| - 0.0096 15.4 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 gi|41615216|ref|NP_963714.1| - 0.016 15.5 0.0 0.031 14.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|41615216|ref|NP_963714.1| - 0.019 15.3 0.0 0.049 14.0 0.0 1.8 1 0 0 1 1 1 0 RNA helicase DUF4976 PF16347.5 gi|41615216|ref|NP_963714.1| - 0.033 14.4 0.6 0.082 13.2 0.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) AAA_18 PF13238.6 gi|41615216|ref|NP_963714.1| - 0.037 14.6 0.0 0.12 12.9 0.0 2.0 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|41615216|ref|NP_963714.1| - 0.046 14.1 0.1 0.39 11.0 0.1 2.4 1 1 1 2 2 2 0 AAA domain TsaE PF02367.17 gi|41615216|ref|NP_963714.1| - 0.05 13.6 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|41615216|ref|NP_963714.1| - 0.075 12.6 0.0 0.18 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|41615216|ref|NP_963714.1| - 0.095 12.1 0.0 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 gi|41615216|ref|NP_963714.1| - 0.11 11.5 0.0 0.26 10.3 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein Ribosomal_L3 PF00297.22 gi|41615218|ref|NP_963716.1| - 1e-68 232.0 0.9 4.2e-68 230.0 0.9 1.8 1 1 0 1 1 1 1 Ribosomal protein L3 Peptidase_S24 PF00717.23 gi|41615219|ref|NP_963717.1| - 0.0083 16.1 0.2 0.016 15.1 0.2 1.5 1 0 0 1 1 1 1 Peptidase S24-like GTP_EFTU_D2 PF03144.25 gi|41615219|ref|NP_963717.1| - 0.15 12.4 0.1 0.27 11.6 0.1 1.4 1 0 0 1 1 1 0 Elongation factor Tu domain 2 SRP54 PF00448.22 gi|41615219|ref|NP_963717.1| - 0.17 11.5 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DEAD PF00270.29 gi|41615220|ref|NP_963718.1| - 1.8e-14 53.9 0.1 1.7e-12 47.4 0.0 2.9 2 1 0 2 2 2 1 DEAD/DEAH box helicase zf_Rg PF17915.1 gi|41615220|ref|NP_963718.1| - 1.7e-11 43.4 0.2 2.9e-11 42.6 0.2 1.4 1 0 0 1 1 1 1 Reverse gyrase zinc finger ResIII PF04851.15 gi|41615220|ref|NP_963718.1| - 4.6e-09 36.5 0.9 4.6e-09 36.5 0.9 2.6 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|41615220|ref|NP_963718.1| - 1e-06 29.0 2.0 0.44 10.9 0.1 4.2 3 1 1 4 4 4 2 Helicase conserved C-terminal domain PP2C_C PF07830.13 gi|41615220|ref|NP_963718.1| - 0.016 15.6 1.5 0.049 14.1 0.1 2.6 3 0 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain PhoH PF02562.16 gi|41615220|ref|NP_963718.1| - 0.032 13.7 0.1 0.13 11.7 0.1 2.0 1 1 0 1 1 1 0 PhoH-like protein AAA_19 PF13245.6 gi|41615220|ref|NP_963718.1| - 0.038 14.3 0.0 0.13 12.6 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|41615220|ref|NP_963718.1| - 0.045 13.5 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Mur_ligase_M PF08245.12 gi|41615220|ref|NP_963718.1| - 0.089 12.8 0.2 0.86 9.6 0.0 2.4 1 1 1 2 2 2 0 Mur ligase middle domain RSV_NS2 PF03113.14 gi|41615220|ref|NP_963718.1| - 0.16 12.0 2.1 7.2 6.6 0.5 2.4 2 0 0 2 2 2 0 Respiratory synctial virus non-structural protein NS2 Ish1 PF10281.9 gi|41615220|ref|NP_963718.1| - 0.28 11.5 1.4 7.8 6.9 0.2 3.4 3 0 0 3 3 3 0 Putative stress-responsive nuclear envelope protein DUF460 PF04312.13 gi|41615221|ref|NP_963719.1| - 2.6e-30 104.9 1.9 3.5e-30 104.5 0.0 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF460) DUF5424 PF17462.2 gi|41615221|ref|NP_963719.1| - 0.048 13.6 2.7 0.12 12.3 2.7 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5424) bZIP_2 PF07716.15 gi|41615221|ref|NP_963719.1| - 0.099 12.7 5.2 0.17 12.0 0.7 2.8 2 0 0 2 2 2 0 Basic region leucine zipper YgbB PF02542.16 gi|41615221|ref|NP_963719.1| - 0.31 11.3 1.9 0.6 10.4 1.9 1.5 1 0 0 1 1 1 0 YgbB family DUF2344 PF10105.9 gi|41615221|ref|NP_963719.1| - 0.59 10.0 8.7 0.84 9.5 8.2 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) SecD_SecF PF02355.16 gi|41615222|ref|NP_963720.1| - 1e-06 28.3 22.1 5.5e-06 25.9 22.1 2.0 1 1 0 1 1 1 1 Protein export membrane protein MMPL PF03176.15 gi|41615222|ref|NP_963720.1| - 1.3 7.9 24.0 2 7.3 24.0 1.1 1 0 0 1 1 1 0 MMPL family Gemini_mov PF01708.16 gi|41615222|ref|NP_963720.1| - 2.5 7.9 4.4 0.5 10.2 0.3 1.9 2 0 0 2 2 2 0 Geminivirus putative movement protein SecD_SecF PF02355.16 gi|41615223|ref|NP_963721.1| - 7.5e-20 71.1 13.1 1.9e-19 69.8 13.1 1.6 1 1 0 1 1 1 1 Protein export membrane protein Mor PF08765.11 gi|41615223|ref|NP_963721.1| - 0.038 14.0 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 Mor transcription activator family RAP PF08373.10 gi|41615223|ref|NP_963721.1| - 0.088 12.9 0.1 0.19 11.8 0.1 1.5 1 0 0 1 1 1 0 RAP domain VIT1 PF01988.19 gi|41615223|ref|NP_963721.1| - 8.1 6.2 9.8 0.57 10.0 0.5 2.2 1 1 1 2 2 2 0 VIT family FbpA PF05833.11 gi|41615224|ref|NP_963722.1| - 6.5e-24 84.5 10.2 1.5e-23 83.3 10.2 1.5 1 1 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) H2TH PF06831.14 gi|41615224|ref|NP_963722.1| - 0.022 14.8 0.0 0.061 13.3 0.0 1.7 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain Ribosomal_S13 PF00416.22 gi|41615224|ref|NP_963722.1| - 0.035 14.5 0.4 0.2 12.0 0.1 2.1 1 1 1 2 2 2 0 Ribosomal protein S13/S18 UPF0020 PF01170.18 gi|41615225|ref|NP_963723.1| - 8.2e-27 94.2 0.0 6.5e-26 91.2 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.10 gi|41615225|ref|NP_963723.1| - 1.5e-07 31.1 0.0 3.1e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_N4_Mtase PF01555.18 gi|41615225|ref|NP_963723.1| - 8.9e-07 28.8 0.0 3.6e-05 23.6 0.0 2.2 2 1 0 2 2 2 1 DNA methylase Methyltransf_31 PF13847.6 gi|41615225|ref|NP_963723.1| - 9.3e-06 25.5 0.0 1.5e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 gi|41615225|ref|NP_963723.1| - 1.8e-05 24.3 0.1 0.00066 19.2 0.0 2.1 1 1 1 2 2 2 1 RRNA methyltransferase AviRa Methyltransf_25 PF13649.6 gi|41615225|ref|NP_963723.1| - 6.9e-05 23.5 0.0 0.00011 22.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|41615225|ref|NP_963723.1| - 0.00026 20.4 0.0 0.00046 19.6 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase MTS PF05175.14 gi|41615225|ref|NP_963723.1| - 0.00038 20.0 0.0 0.00059 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|41615225|ref|NP_963723.1| - 0.017 15.8 0.0 0.029 15.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|41615225|ref|NP_963723.1| - 0.022 14.4 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 gi|41615225|ref|NP_963723.1| - 0.038 13.3 0.0 0.058 12.7 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family N2227 PF07942.12 gi|41615225|ref|NP_963723.1| - 0.073 12.3 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 N2227-like protein Pur_ac_phosph_N PF16656.5 gi|41615226|ref|NP_963724.1| - 0.023 15.3 0.8 0.062 13.9 0.1 2.2 2 0 0 2 2 2 0 Purple acid Phosphatase, N-terminal domain AMMECR1 PF01871.17 gi|41615227|ref|NP_963725.1| - 1.4e-49 167.9 0.0 1.6e-49 167.7 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Pilin_N PF07790.11 gi|41615229|ref|NP_963727.1| - 0.0015 19.4 2.7 0.0027 18.6 1.4 2.2 2 1 0 2 2 2 1 Archaeal Type IV pilin, N-terminal FBPase PF00316.20 gi|41615229|ref|NP_963727.1| - 0.052 13.0 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain Tad PF13400.6 gi|41615229|ref|NP_963727.1| - 0.39 11.0 3.9 0.78 10.1 3.9 1.5 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like DUF3568 PF12092.8 gi|41615230|ref|NP_963728.1| - 0.24 11.5 1.3 0.33 11.0 0.2 1.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3568) Ribosomal_S9 PF00380.19 gi|41615231|ref|NP_963729.1| - 2.1e-25 89.6 0.0 2.4e-25 89.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SAS-6_N PF16531.5 gi|41615232|ref|NP_963730.1| - 0.022 15.4 0.8 0.83 10.3 0.1 2.4 1 1 2 3 3 3 0 Centriolar protein SAS N-terminal Haemocyan_bet_s PF14830.6 gi|41615232|ref|NP_963730.1| - 0.059 13.4 0.1 0.4 10.7 0.1 2.0 1 1 0 1 1 1 0 Haemocyanin beta-sandwich Exosortase_EpsH PF09721.10 gi|41615233|ref|NP_963731.1| - 0.019 14.5 6.3 0.032 13.8 6.3 1.5 1 1 0 1 1 1 0 Transmembrane exosortase (Exosortase_EpsH) GIT1_C PF12205.8 gi|41615234|ref|NP_963732.1| - 2.6e-05 24.3 3.5 0.00082 19.5 0.6 2.1 2 0 0 2 2 2 1 G protein-coupled receptor kinase-interacting protein 1 C term Prefoldin_2 PF01920.20 gi|41615234|ref|NP_963732.1| - 0.00021 21.2 14.3 0.022 14.7 0.8 3.3 1 1 2 3 3 3 2 Prefoldin subunit AAA_13 PF13166.6 gi|41615234|ref|NP_963732.1| - 0.00026 19.8 7.2 0.00032 19.5 7.2 1.1 1 0 0 1 1 1 1 AAA domain FliD_N PF02465.18 gi|41615234|ref|NP_963732.1| - 0.00034 21.3 2.6 0.39 11.4 0.5 2.2 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 N-terminus AIP3 PF03915.13 gi|41615234|ref|NP_963732.1| - 0.00054 19.2 9.0 0.00076 18.7 9.0 1.1 1 0 0 1 1 1 1 Actin interacting protein 3 YabA PF06156.13 gi|41615234|ref|NP_963732.1| - 0.00055 20.5 9.6 0.0014 19.3 0.7 2.7 1 1 2 3 3 3 1 Initiation control protein YabA DUF1664 PF07889.12 gi|41615234|ref|NP_963732.1| - 0.00055 20.0 4.5 0.00055 20.0 4.5 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 gi|41615234|ref|NP_963732.1| - 0.00063 19.9 11.0 0.095 12.9 8.3 2.1 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family TPR_MLP1_2 PF07926.12 gi|41615234|ref|NP_963732.1| - 0.00065 19.8 9.7 0.11 12.5 2.1 2.1 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein ZapB PF06005.12 gi|41615234|ref|NP_963732.1| - 0.00066 20.1 13.4 0.55 10.7 0.5 3.1 2 1 0 2 2 2 1 Cell division protein ZapB TolA_bind_tri PF16331.5 gi|41615234|ref|NP_963732.1| - 0.00086 19.3 0.8 0.16 12.1 0.0 2.3 2 0 0 2 2 2 1 TolA binding protein trimerisation EzrA PF06160.12 gi|41615234|ref|NP_963732.1| - 0.0011 17.3 1.8 0.0011 17.3 1.8 1.9 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA Filament PF00038.21 gi|41615234|ref|NP_963732.1| - 0.0011 18.6 3.6 0.0017 18.0 3.6 1.2 1 0 0 1 1 1 1 Intermediate filament protein Cep57_MT_bd PF06657.13 gi|41615234|ref|NP_963732.1| - 0.0017 18.8 0.4 0.0017 18.8 0.4 2.9 1 1 2 3 3 2 1 Centrosome microtubule-binding domain of Cep57 PspA_IM30 PF04012.12 gi|41615234|ref|NP_963732.1| - 0.0021 17.7 6.7 0.0052 16.4 6.7 1.5 1 1 0 1 1 1 1 PspA/IM30 family COG5 PF10392.9 gi|41615234|ref|NP_963732.1| - 0.0034 17.6 3.7 0.0034 17.6 3.7 2.0 1 1 1 2 2 2 1 Golgi transport complex subunit 5 HOOK PF05622.12 gi|41615234|ref|NP_963732.1| - 0.0039 15.4 7.3 0.0049 15.1 7.3 1.0 1 0 0 1 1 1 1 HOOK protein Prefoldin PF02996.17 gi|41615234|ref|NP_963732.1| - 0.004 17.0 12.2 0.033 14.1 1.3 2.7 1 1 1 2 2 2 1 Prefoldin subunit Baculo_PEP_C PF04513.12 gi|41615234|ref|NP_963732.1| - 0.0043 17.1 7.1 0.0094 16.0 7.1 1.6 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus FliD_C PF07195.12 gi|41615234|ref|NP_963732.1| - 0.0052 16.2 3.5 0.011 15.2 3.5 1.7 1 1 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus FlaC_arch PF05377.11 gi|41615234|ref|NP_963732.1| - 0.0052 17.1 1.2 0.0052 17.1 1.2 3.9 1 1 2 4 4 4 1 Flagella accessory protein C (FlaC) LMBR1 PF04791.16 gi|41615234|ref|NP_963732.1| - 0.0061 15.5 2.6 0.0072 15.3 2.6 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein KELK PF15796.5 gi|41615234|ref|NP_963732.1| - 0.0067 16.9 6.0 0.11 13.0 0.5 2.4 2 0 0 2 2 2 1 KELK-motif containing domain of MRCK Ser/Thr protein kinase Syntaxin_2 PF14523.6 gi|41615234|ref|NP_963732.1| - 0.0075 16.6 10.5 0.018 15.4 2.2 2.9 1 1 1 2 2 2 2 Syntaxin-like protein MscS_porin PF12795.7 gi|41615234|ref|NP_963732.1| - 0.0088 15.6 8.0 0.18 11.3 2.2 2.1 1 1 1 2 2 2 1 Mechanosensitive ion channel porin domain DivIC PF04977.15 gi|41615234|ref|NP_963732.1| - 0.0097 15.7 1.5 0.0097 15.7 1.5 3.0 1 1 2 3 3 3 1 Septum formation initiator Atg14 PF10186.9 gi|41615234|ref|NP_963732.1| - 0.01 14.9 8.9 0.019 14.1 1.8 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 ATG16 PF08614.11 gi|41615234|ref|NP_963732.1| - 0.011 16.0 1.1 0.011 16.0 1.1 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Cas_DxTHG PF09455.10 gi|41615234|ref|NP_963732.1| - 0.011 15.4 4.3 0.013 15.1 4.3 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family DHC_N1 PF08385.12 gi|41615234|ref|NP_963732.1| - 0.013 14.2 2.6 0.016 13.9 2.6 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 KfrA_N PF11740.8 gi|41615234|ref|NP_963732.1| - 0.013 16.2 5.8 0.039 14.6 1.9 2.6 1 1 2 3 3 3 0 Plasmid replication region DNA-binding N-term Laminin_II PF06009.12 gi|41615234|ref|NP_963732.1| - 0.015 15.3 13.7 0.12 12.4 1.4 2.0 1 1 1 2 2 2 0 Laminin Domain II TMPIT PF07851.13 gi|41615234|ref|NP_963732.1| - 0.015 14.5 7.7 0.061 12.6 0.5 2.0 1 1 1 2 2 2 0 TMPIT-like protein AcylCoA_dehyd_C PF12186.8 gi|41615234|ref|NP_963732.1| - 0.016 15.3 3.0 0.035 14.2 0.2 2.2 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Spectrin PF00435.21 gi|41615234|ref|NP_963732.1| - 0.018 15.5 0.7 0.018 15.5 0.7 2.1 1 1 1 2 2 2 0 Spectrin repeat Prominin PF05478.11 gi|41615234|ref|NP_963732.1| - 0.019 13.0 8.3 0.043 11.8 8.5 1.5 1 1 0 1 1 1 0 Prominin DUF5082 PF16888.5 gi|41615234|ref|NP_963732.1| - 0.019 15.2 12.1 0.17 12.2 3.1 2.7 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) GCR PF02155.15 gi|41615234|ref|NP_963732.1| - 0.022 13.8 0.2 0.03 13.4 0.1 1.2 1 1 0 1 1 1 0 Glucocorticoid receptor IL11 PF07400.11 gi|41615234|ref|NP_963732.1| - 0.023 14.4 2.7 1 8.9 0.5 2.5 1 1 2 3 3 2 0 Interleukin 11 Vac_Fusion PF02346.16 gi|41615234|ref|NP_963732.1| - 0.024 14.3 2.3 0.11 12.1 0.0 2.8 3 1 1 4 4 2 0 Chordopoxvirus multifunctional envelope protein A27 ApoLp-III PF07464.11 gi|41615234|ref|NP_963732.1| - 0.024 14.7 13.3 0.08 13.0 2.1 2.2 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) TACC_C PF05010.14 gi|41615234|ref|NP_963732.1| - 0.025 14.4 9.7 1.1 9.0 10.0 2.0 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF4349 PF14257.6 gi|41615234|ref|NP_963732.1| - 0.025 14.0 4.2 0.014 14.8 2.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) DUF5339 PF17274.2 gi|41615234|ref|NP_963732.1| - 0.029 15.2 6.9 0.067 14.1 0.4 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5339) NPV_P10 PF05531.12 gi|41615234|ref|NP_963732.1| - 0.029 14.8 1.0 0.029 14.8 1.0 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DASH_Dad1 PF08649.10 gi|41615234|ref|NP_963732.1| - 0.037 14.2 7.6 0.42 10.8 0.7 3.3 3 0 0 3 3 3 0 DASH complex subunit Dad1 KASH_CCD PF14662.6 gi|41615234|ref|NP_963732.1| - 0.039 13.8 15.3 0.12 12.2 2.0 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Occludin_ELL PF07303.13 gi|41615234|ref|NP_963732.1| - 0.05 14.3 4.9 2.3 9.0 0.3 2.3 1 1 1 2 2 2 0 Occludin homology domain MCPsignal PF00015.21 gi|41615234|ref|NP_963732.1| - 0.051 13.4 9.5 0.075 12.8 6.0 2.0 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Seryl_tRNA_N PF02403.22 gi|41615234|ref|NP_963732.1| - 0.052 13.8 15.4 0.27 11.5 6.0 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4618 PF15397.6 gi|41615234|ref|NP_963732.1| - 0.056 12.9 12.7 2.7 7.3 12.7 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) BCAS2 PF05700.11 gi|41615234|ref|NP_963732.1| - 0.056 13.1 6.6 0.75 9.4 0.2 2.2 1 1 1 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) CREPT PF16566.5 gi|41615234|ref|NP_963732.1| - 0.059 13.5 7.1 0.15 12.2 1.6 2.1 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour FlxA PF14282.6 gi|41615234|ref|NP_963732.1| - 0.062 13.3 0.2 0.062 13.3 0.2 3.2 1 1 1 3 3 3 0 FlxA-like protein Snf7 PF03357.21 gi|41615234|ref|NP_963732.1| - 0.065 12.8 13.1 0.064 12.9 2.8 2.7 1 1 2 3 3 3 0 Snf7 Apolipoprotein PF01442.18 gi|41615234|ref|NP_963732.1| - 0.068 13.0 6.0 0.13 12.1 6.0 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain BLOC1_2 PF10046.9 gi|41615234|ref|NP_963732.1| - 0.073 13.4 12.8 0.31 11.4 0.9 3.0 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CALCOCO1 PF07888.11 gi|41615234|ref|NP_963732.1| - 0.074 11.9 6.8 0.12 11.3 6.8 1.2 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Phage_GPO PF05929.11 gi|41615234|ref|NP_963732.1| - 0.084 12.5 4.4 0.17 11.5 4.4 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase WXG100 PF06013.12 gi|41615234|ref|NP_963732.1| - 0.087 13.1 1.3 0.42 10.9 0.1 2.5 1 1 1 2 2 2 0 Proteins of 100 residues with WXG UPF0242 PF06785.11 gi|41615234|ref|NP_963732.1| - 0.092 12.8 8.6 0.12 12.4 8.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus betaPIX_CC PF16523.5 gi|41615234|ref|NP_963732.1| - 0.094 12.6 0.3 0.094 12.6 0.3 2.6 1 1 1 3 3 2 0 betaPIX coiled coil Mod_r PF07200.13 gi|41615234|ref|NP_963732.1| - 0.096 12.8 11.7 0.85 9.7 2.9 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein TMF_DNA_bd PF12329.8 gi|41615234|ref|NP_963732.1| - 0.1 12.6 21.0 0.33 11.0 4.2 3.1 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF2408 PF10303.9 gi|41615234|ref|NP_963732.1| - 0.1 13.2 10.7 0.52 10.9 2.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) SlyX PF04102.12 gi|41615234|ref|NP_963732.1| - 0.1 13.2 0.5 0.1 13.2 0.5 2.9 1 1 2 3 3 3 0 SlyX AATF-Che1 PF13339.6 gi|41615234|ref|NP_963732.1| - 0.1 13.3 7.0 0.68 10.6 0.3 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor CENP-F_leu_zip PF10473.9 gi|41615234|ref|NP_963732.1| - 0.11 12.6 15.4 0.061 13.3 2.4 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4298 PF14131.6 gi|41615234|ref|NP_963732.1| - 0.12 12.3 5.3 0.96 9.5 0.3 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4298) Syntaxin-6_N PF09177.11 gi|41615234|ref|NP_963732.1| - 0.12 12.9 6.2 2.7 8.6 6.2 2.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Spc7 PF08317.11 gi|41615234|ref|NP_963732.1| - 0.13 11.1 14.4 0.17 10.8 6.2 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein DivIVA PF05103.13 gi|41615234|ref|NP_963732.1| - 0.13 12.3 11.9 1.3 9.1 1.8 2.6 1 1 2 3 3 3 0 DivIVA protein DLP_helical PF18709.1 gi|41615234|ref|NP_963732.1| - 0.13 11.4 10.3 0.1 11.8 1.8 2.1 1 1 1 2 2 2 0 Dynamin-like helical domain FlgN PF05130.12 gi|41615234|ref|NP_963732.1| - 0.15 12.6 9.2 0.29 11.6 1.8 2.1 1 1 1 2 2 2 0 FlgN protein DUF4145 PF13643.6 gi|41615234|ref|NP_963732.1| - 0.15 12.2 3.5 0.38 10.9 0.2 2.6 1 1 2 3 3 2 0 Domain of unknown function (DUF4145) DUF2203 PF09969.9 gi|41615234|ref|NP_963732.1| - 0.15 12.8 6.9 0.13 12.9 1.1 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) STAT_alpha PF01017.20 gi|41615234|ref|NP_963732.1| - 0.16 11.9 8.1 4 7.3 8.1 2.1 1 1 0 1 1 1 0 STAT protein, all-alpha domain DUF3829 PF12889.7 gi|41615234|ref|NP_963732.1| - 0.16 11.4 6.6 2.6 7.5 6.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) APG17 PF04108.12 gi|41615234|ref|NP_963732.1| - 0.17 10.9 9.9 0.1 11.7 1.1 2.1 1 1 1 2 2 2 0 Autophagy protein Apg17 Nup88 PF10168.9 gi|41615234|ref|NP_963732.1| - 0.18 9.6 7.7 0.22 9.3 7.7 1.2 1 0 0 1 1 1 0 Nuclear pore component DUF1512 PF07431.12 gi|41615234|ref|NP_963732.1| - 0.18 10.8 9.1 0.2 10.6 8.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1512) TraF_2 PF13729.6 gi|41615234|ref|NP_963732.1| - 0.18 11.1 1.1 0.24 10.7 0.9 1.3 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Serine_rich PF08824.10 gi|41615234|ref|NP_963732.1| - 0.18 11.8 4.6 4.4 7.3 0.5 2.0 1 1 1 2 2 2 0 Serine rich protein interaction domain FapA PF03961.13 gi|41615234|ref|NP_963732.1| - 0.19 10.3 12.1 0.016 13.9 4.3 1.9 1 1 1 2 2 2 0 Flagellar Assembly Protein A Bacillus_HBL PF05791.11 gi|41615234|ref|NP_963732.1| - 0.19 11.5 9.3 0.059 13.2 4.2 1.9 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Filo_VP35 PF02097.15 gi|41615234|ref|NP_963732.1| - 0.19 10.8 5.4 0.28 10.2 0.7 2.1 1 1 1 2 2 2 0 Filoviridae VP35 DUF3987 PF13148.6 gi|41615234|ref|NP_963732.1| - 0.19 10.7 4.0 0.053 12.5 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) Cob_adeno_trans PF01923.18 gi|41615234|ref|NP_963732.1| - 0.19 11.8 2.7 0.24 11.5 1.4 1.9 1 1 1 2 2 1 0 Cobalamin adenosyltransferase DUF745 PF05335.13 gi|41615234|ref|NP_963732.1| - 0.2 11.4 8.5 2.1 8.0 7.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF745) APO_RNA-bind PF05634.11 gi|41615234|ref|NP_963732.1| - 0.2 11.0 2.2 0.24 10.7 1.6 1.4 1 1 0 1 1 1 0 APO RNA-binding DUF4763 PF15960.5 gi|41615234|ref|NP_963732.1| - 0.22 10.8 7.2 5.7 6.2 7.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) THOC7 PF05615.13 gi|41615234|ref|NP_963732.1| - 0.23 11.8 10.9 0.14 12.4 1.9 2.5 1 1 0 2 2 2 0 Tho complex subunit 7 DUF4795 PF16043.5 gi|41615234|ref|NP_963732.1| - 0.25 10.9 13.0 1.1 8.8 13.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Spore_III_AB PF09548.10 gi|41615234|ref|NP_963732.1| - 0.27 11.3 4.2 0.33 11.0 0.1 2.2 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) COG2 PF06148.11 gi|41615234|ref|NP_963732.1| - 0.28 11.3 11.2 3.2 7.9 2.1 2.5 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF2312 PF10073.9 gi|41615234|ref|NP_963732.1| - 0.3 10.7 6.8 0.12 12.0 1.0 2.5 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) APG6_N PF17675.1 gi|41615234|ref|NP_963732.1| - 0.32 11.5 13.3 11 6.5 13.5 2.1 1 1 0 1 1 1 0 Apg6 coiled-coil region Rx_N PF18052.1 gi|41615234|ref|NP_963732.1| - 0.33 11.3 9.4 0.27 11.5 0.8 2.5 1 1 2 3 3 3 0 Rx N-terminal domain GCN5L1 PF06320.13 gi|41615234|ref|NP_963732.1| - 0.35 11.0 8.2 0.77 9.9 1.0 2.4 1 1 1 2 2 2 0 GCN5-like protein 1 (GCN5L1) CENP-H PF05837.12 gi|41615234|ref|NP_963732.1| - 0.35 11.3 12.7 1.6 9.1 1.0 2.6 1 1 2 3 3 3 0 Centromere protein H (CENP-H) DUF948 PF06103.11 gi|41615234|ref|NP_963732.1| - 0.36 11.1 7.3 0.77 10.1 2.8 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 gi|41615234|ref|NP_963732.1| - 0.37 10.0 10.7 0.2 10.9 1.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) HisKA_3 PF07730.13 gi|41615234|ref|NP_963732.1| - 0.38 11.3 2.6 12 6.5 0.6 3.0 2 1 0 2 2 2 0 Histidine kinase DHR10 PF18595.1 gi|41615234|ref|NP_963732.1| - 0.39 10.8 14.0 0.067 13.2 2.8 2.2 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain BSD PF03909.17 gi|41615234|ref|NP_963732.1| - 0.39 10.8 4.2 0.71 9.9 0.1 3.1 1 1 1 3 3 2 0 BSD domain DUF2730 PF10805.8 gi|41615234|ref|NP_963732.1| - 0.4 10.8 5.3 0.25 11.5 2.1 2.1 1 1 1 2 2 1 0 Protein of unknown function (DUF2730) Tektin PF03148.14 gi|41615234|ref|NP_963732.1| - 0.41 9.3 12.0 0.12 11.1 2.7 2.2 1 1 1 2 2 2 0 Tektin family Sigma70_ner PF04546.13 gi|41615234|ref|NP_963732.1| - 0.41 10.5 8.8 0.82 9.5 8.8 1.5 1 1 0 1 1 1 0 Sigma-70, non-essential region DUF885 PF05960.11 gi|41615234|ref|NP_963732.1| - 0.44 10.1 1.5 1.9 8.0 1.6 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF885) FAM184 PF15665.5 gi|41615234|ref|NP_963732.1| - 0.45 10.3 9.9 0.91 9.3 0.6 2.0 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B Uds1 PF15456.6 gi|41615234|ref|NP_963732.1| - 0.48 10.6 7.1 4.3 7.5 7.0 2.2 1 1 1 2 2 2 0 Up-regulated During Septation GHMP_kinases_C PF08544.13 gi|41615234|ref|NP_963732.1| - 0.49 10.8 1.8 13 6.2 0.1 2.7 2 1 0 2 2 2 0 GHMP kinases C terminal DUF4094 PF13334.6 gi|41615234|ref|NP_963732.1| - 0.49 10.8 8.5 2.7 8.5 0.8 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4094) DegS PF05384.11 gi|41615234|ref|NP_963732.1| - 0.49 9.9 13.3 0.92 9.0 2.2 2.2 1 1 0 2 2 2 0 Sensor protein DegS TBCC_N PF16752.5 gi|41615234|ref|NP_963732.1| - 0.54 10.7 8.3 12 6.4 8.3 2.5 1 1 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain HeLo PF14479.6 gi|41615234|ref|NP_963732.1| - 0.54 10.1 4.8 9.6 6.0 4.8 2.5 1 1 0 1 1 1 0 Prion-inhibition and propagation YkyA PF10368.9 gi|41615234|ref|NP_963732.1| - 0.58 9.8 14.7 5 6.7 14.7 1.9 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Snapin_Pallidin PF14712.6 gi|41615234|ref|NP_963732.1| - 0.59 10.6 10.6 0.14 12.6 1.0 2.9 1 1 2 3 3 2 0 Snapin/Pallidin LPP PF04728.13 gi|41615234|ref|NP_963732.1| - 0.63 10.5 9.3 1.1 9.7 0.3 3.9 2 1 2 4 4 4 0 Lipoprotein leucine-zipper Sec34 PF04136.15 gi|41615234|ref|NP_963732.1| - 0.64 9.9 8.2 0.79 9.6 1.7 2.3 1 1 1 2 2 2 0 Sec34-like family DUF883 PF05957.13 gi|41615234|ref|NP_963732.1| - 0.67 10.6 3.4 4 8.1 0.2 2.4 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DASH_Dam1 PF08653.10 gi|41615234|ref|NP_963732.1| - 0.75 9.6 4.3 1.7 8.5 0.5 3.2 2 2 1 3 3 1 0 DASH complex subunit Dam1 DUF4446 PF14584.6 gi|41615234|ref|NP_963732.1| - 0.75 9.8 9.0 0.42 10.6 1.0 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF4446) DUF4140 PF13600.6 gi|41615234|ref|NP_963732.1| - 0.75 10.3 6.6 31 5.1 6.5 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) GTP-bdg_M PF16360.5 gi|41615234|ref|NP_963732.1| - 0.77 10.4 3.9 5.4 7.7 0.2 2.8 2 1 0 2 2 2 0 GTP-binding GTPase Middle Region Herpes_UL6 PF01763.16 gi|41615234|ref|NP_963732.1| - 0.78 8.2 8.2 8.7 4.7 8.7 1.9 1 1 0 1 1 1 0 Herpesvirus UL6 like Muted PF14942.6 gi|41615234|ref|NP_963732.1| - 0.79 10.1 10.8 3.9 7.8 2.2 2.1 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein SKA1 PF07160.12 gi|41615234|ref|NP_963732.1| - 0.79 9.5 12.1 0.07 13.0 1.7 2.2 1 1 0 2 2 2 0 Spindle and kinetochore-associated protein 1 RasGAP_C PF03836.15 gi|41615234|ref|NP_963732.1| - 0.81 9.8 7.3 0.33 11.1 0.8 2.2 1 1 0 2 2 2 0 RasGAP C-terminus Vps53_N PF04100.12 gi|41615234|ref|NP_963732.1| - 0.82 8.6 12.0 1.4 7.8 3.8 2.2 1 1 1 2 2 2 0 Vps53-like, N-terminal HMMR_N PF15905.5 gi|41615234|ref|NP_963732.1| - 0.88 9.0 15.7 0.86 9.0 2.4 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF4047 PF13256.6 gi|41615234|ref|NP_963732.1| - 0.89 9.8 9.8 3.3 7.9 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) Med4 PF10018.9 gi|41615234|ref|NP_963732.1| - 0.92 9.2 12.7 0.92 9.1 1.2 2.6 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF16 PF01519.16 gi|41615234|ref|NP_963732.1| - 0.93 10.0 13.1 0.44 11.1 1.9 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF1043 PF06295.12 gi|41615234|ref|NP_963732.1| - 0.94 9.5 5.7 0.44 10.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) Allexi_40kDa PF05549.11 gi|41615234|ref|NP_963732.1| - 0.95 8.9 5.9 0.48 9.9 2.9 1.7 1 1 1 2 2 2 0 Allexivirus 40kDa protein PCRF PF03462.18 gi|41615234|ref|NP_963732.1| - 0.99 9.2 9.7 2 8.2 0.9 2.1 1 1 1 2 2 2 0 PCRF domain DUF2959 PF11172.8 gi|41615234|ref|NP_963732.1| - 0.99 9.5 7.9 4.4 7.4 0.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2959) ABC_tran_CTD PF16326.5 gi|41615234|ref|NP_963732.1| - 1 9.7 14.1 0.53 10.6 3.7 2.9 1 1 0 2 2 2 0 ABC transporter C-terminal domain DUF1633 PF07794.11 gi|41615234|ref|NP_963732.1| - 1.1 7.4 5.4 1.3 7.1 1.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1633) Sec8_exocyst PF04048.14 gi|41615234|ref|NP_963732.1| - 1.1 9.2 8.4 2.6 7.9 2.3 2.4 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain Tweety PF04906.13 gi|41615234|ref|NP_963732.1| - 1.1 7.8 5.8 0.27 9.9 1.3 1.8 1 1 1 2 2 2 0 Tweety DUF848 PF05852.11 gi|41615234|ref|NP_963732.1| - 1.2 9.3 9.7 8.6 6.5 8.4 2.1 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) BRE1 PF08647.11 gi|41615234|ref|NP_963732.1| - 1.3 9.2 14.6 2.5 8.2 3.1 2.7 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase PPP1R35_C PF15503.6 gi|41615234|ref|NP_963732.1| - 1.3 8.8 8.3 0.14 12.0 1.3 2.2 2 1 0 2 2 2 0 Protein phosphatase 1 regulatory subunit 35 C-terminus H-kinase_dim PF02895.14 gi|41615234|ref|NP_963732.1| - 1.4 9.4 6.1 28 5.2 6.1 2.7 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain DUF2935 PF11155.8 gi|41615234|ref|NP_963732.1| - 1.4 9.3 5.8 80 3.6 5.5 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) DUF4200 PF13863.6 gi|41615234|ref|NP_963732.1| - 1.6 9.2 14.3 3.9 7.9 2.2 2.8 1 1 0 2 2 2 0 Domain of unknown function (DUF4200) BST2 PF16716.5 gi|41615234|ref|NP_963732.1| - 1.6 9.3 10.5 0.14 12.8 1.5 2.5 1 1 1 2 2 1 0 Bone marrow stromal antigen 2 DUF2508 PF10704.9 gi|41615234|ref|NP_963732.1| - 1.7 8.9 7.4 0.44 10.7 0.8 2.5 2 1 1 3 3 2 0 Protein of unknown function (DUF2508) RPW8 PF05659.11 gi|41615234|ref|NP_963732.1| - 1.7 8.3 11.1 2.9 7.6 2.8 2.7 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HAUS-augmin3 PF14932.6 gi|41615234|ref|NP_963732.1| - 1.8 8.1 9.8 1.6 8.2 1.5 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DUF724 PF05266.14 gi|41615234|ref|NP_963732.1| - 1.9 8.3 13.7 0.051 13.4 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF4600 PF15372.6 gi|41615234|ref|NP_963732.1| - 1.9 8.9 9.9 0.34 11.3 0.7 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4600) DUF812 PF05667.11 gi|41615234|ref|NP_963732.1| - 1.9 7.3 13.9 24 3.7 14.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF812) K-box PF01486.17 gi|41615234|ref|NP_963732.1| - 2 8.6 9.3 2.4 8.4 0.6 3.0 1 1 0 2 2 2 0 K-box region ADIP PF11559.8 gi|41615234|ref|NP_963732.1| - 2.3 8.3 10.1 0.18 11.9 2.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Histone_HNS PF00816.21 gi|41615234|ref|NP_963732.1| - 2.4 9.1 8.6 9.9 7.1 0.5 2.3 1 1 1 2 2 2 0 H-NS histone family CorA PF01544.18 gi|41615234|ref|NP_963732.1| - 2.5 7.4 6.6 5.5 6.2 6.7 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Swi5 PF07061.11 gi|41615234|ref|NP_963732.1| - 2.6 8.2 12.4 2.1 8.5 1.1 3.4 1 1 2 3 3 3 0 Swi5 ACCA PF03255.14 gi|41615234|ref|NP_963732.1| - 2.6 7.9 10.8 1.3 8.9 1.4 2.4 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF1192 PF06698.11 gi|41615234|ref|NP_963732.1| - 2.6 8.2 8.1 5.3 7.2 0.3 3.2 3 1 0 3 3 2 0 Protein of unknown function (DUF1192) MetOD2 PF18548.1 gi|41615234|ref|NP_963732.1| - 2.7 8.2 7.7 0.66 10.1 0.5 2.9 1 1 1 3 3 2 0 Metanogen output domain 2 DUF349 PF03993.12 gi|41615234|ref|NP_963732.1| - 2.8 8.3 6.8 2e+02 2.4 6.8 2.5 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) PRKG1_interact PF15898.5 gi|41615234|ref|NP_963732.1| - 2.8 8.9 9.0 7 7.6 1.0 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain HIP1_clath_bdg PF16515.5 gi|41615234|ref|NP_963732.1| - 2.8 8.6 12.6 0.83 10.3 1.6 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 MtrB PF05440.12 gi|41615234|ref|NP_963732.1| - 2.9 8.4 5.5 7.5 7.1 0.5 3.2 1 1 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF1690 PF07956.11 gi|41615234|ref|NP_963732.1| - 3.1 8.2 12.8 4.8e+02 1.1 12.8 2.2 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3782 PF12644.7 gi|41615234|ref|NP_963732.1| - 3.2 8.0 6.9 12 6.1 0.5 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3782) NYD-SP28_assoc PF14775.6 gi|41615234|ref|NP_963732.1| - 3.3 7.9 5.8 2.5 8.3 0.1 3.2 3 2 1 4 4 2 0 Sperm tail C-terminal domain DASH_Dad4 PF08650.10 gi|41615234|ref|NP_963732.1| - 3.3 7.8 10.6 5.5 7.0 0.2 3.6 1 1 2 3 3 3 0 DASH complex subunit Dad4 Osmo_CC PF08946.10 gi|41615234|ref|NP_963732.1| - 3.3 8.0 10.7 3.3 8.0 0.7 3.4 2 1 1 3 3 3 0 Osmosensory transporter coiled coil MIP-T3_C PF17749.1 gi|41615234|ref|NP_963732.1| - 3.3 7.7 13.7 0.68 9.9 1.5 2.8 1 1 0 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region Med9 PF07544.13 gi|41615234|ref|NP_963732.1| - 3.8 7.7 11.3 1.2 9.2 1.9 2.7 1 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 JIP_LZII PF16471.5 gi|41615234|ref|NP_963732.1| - 3.9 7.7 16.7 3.5 7.9 0.5 3.2 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II CAP_N PF01213.19 gi|41615234|ref|NP_963732.1| - 3.9 6.9 10.8 0.29 10.6 6.1 1.4 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal zf-C4H2 PF10146.9 gi|41615234|ref|NP_963732.1| - 4.1 7.7 12.1 1.7e+02 2.3 12.0 2.2 1 1 0 1 1 1 0 Zinc finger-containing protein Tropomyosin_1 PF12718.7 gi|41615234|ref|NP_963732.1| - 4.2 7.5 13.1 12 6.0 12.3 1.8 1 1 0 1 1 1 0 Tropomyosin like NPA PF16469.5 gi|41615234|ref|NP_963732.1| - 4.3 7.9 9.5 8 7.1 2.4 3.0 1 1 2 3 3 3 0 Nematode polyprotein allergen ABA-1 XhlA PF10779.9 gi|41615234|ref|NP_963732.1| - 4.8 7.5 11.6 0.25 11.6 0.6 2.8 2 1 1 3 3 2 0 Haemolysin XhlA USP8_interact PF08941.10 gi|41615234|ref|NP_963732.1| - 5 6.9 9.1 5.1 6.9 0.5 2.1 1 1 1 2 2 2 0 USP8 interacting LUC7 PF03194.15 gi|41615234|ref|NP_963732.1| - 5.2 6.7 9.4 10 5.7 2.3 2.1 1 1 1 2 2 2 0 LUC7 N_terminus Nup54_57_C PF18570.1 gi|41615234|ref|NP_963732.1| - 5.3 6.7 7.8 1.3 8.7 0.6 2.6 2 0 0 2 2 2 0 NUP57/Nup54 C-terminal domain Spc24 PF08286.11 gi|41615234|ref|NP_963732.1| - 5.4 7.3 12.1 1.2 9.5 1.5 2.7 1 1 2 3 3 3 0 Spc24 subunit of Ndc80 FmiP_Thoc5 PF09766.9 gi|41615234|ref|NP_963732.1| - 5.4 6.2 10.1 0.16 11.2 1.2 2.0 1 1 1 2 2 2 0 Fms-interacting protein/Thoc5 DUF4665 PF15679.5 gi|41615234|ref|NP_963732.1| - 5.7 7.6 11.4 3.8e+02 1.8 9.9 3.1 1 1 1 2 2 1 0 Domain of unknown function (DUF4665) DUF2009 PF09418.10 gi|41615234|ref|NP_963732.1| - 6.1 5.8 7.6 3.7 6.5 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2009) V_ATPase_I PF01496.19 gi|41615234|ref|NP_963732.1| - 6.3 4.6 7.7 0.67 7.8 1.3 1.8 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF5320 PF17253.2 gi|41615234|ref|NP_963732.1| - 6.5 7.9 6.3 2.9 9.0 0.6 2.7 2 1 1 3 3 2 0 Family of unknown function (DUF5320) Bap31_Bap29_C PF18035.1 gi|41615234|ref|NP_963732.1| - 6.7 6.8 8.0 6.6 6.8 0.4 2.6 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain Cauli_AT PF03233.13 gi|41615234|ref|NP_963732.1| - 7.1 6.5 12.8 6.9 6.6 1.3 2.2 1 1 1 2 2 2 0 Aphid transmission protein Ax_dynein_light PF10211.9 gi|41615234|ref|NP_963732.1| - 7.1 6.5 12.7 1.2 9.1 2.3 2.6 1 1 2 3 3 3 0 Axonemal dynein light chain DUF2951 PF11166.8 gi|41615234|ref|NP_963732.1| - 7.2 6.9 8.5 1.3 9.3 0.5 2.4 1 1 2 3 3 2 0 Protein of unknown function (DUF2951) Ribosomal_L16 PF00252.18 gi|41615235|ref|NP_963733.1| - 7.2e-31 106.9 0.1 9.4e-31 106.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Peptidase_M54 PF07998.11 gi|41615236|ref|NP_963734.1| - 3.3e-22 79.4 2.9 6.4e-22 78.5 2.9 1.5 1 1 0 1 1 1 1 Peptidase family M54 Metallopep PF12044.8 gi|41615236|ref|NP_963734.1| - 0.00025 19.8 0.1 0.00031 19.5 0.1 1.1 1 0 0 1 1 1 1 Putative peptidase family Peptidase_M66 PF10462.9 gi|41615236|ref|NP_963734.1| - 0.01 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase M66 Ly-6_related PF06579.12 gi|41615236|ref|NP_963734.1| - 0.038 14.2 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein Reprolysin_3 PF13582.6 gi|41615236|ref|NP_963734.1| - 0.042 14.4 0.0 0.061 13.8 0.0 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 gi|41615236|ref|NP_963734.1| - 0.06 13.5 0.0 0.067 13.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Peptidase_M10 PF00413.24 gi|41615236|ref|NP_963734.1| - 0.066 13.1 0.4 0.12 12.2 0.4 1.3 1 1 0 1 1 1 0 Matrixin Reprolysin_2 PF13574.6 gi|41615236|ref|NP_963734.1| - 0.13 12.2 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.6 gi|41615236|ref|NP_963734.1| - 0.19 11.4 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF4953 PF16313.5 gi|41615236|ref|NP_963734.1| - 0.22 10.7 0.1 0.38 9.9 0.1 1.3 1 0 0 1 1 1 0 Met-zincin RNA_pol_A_bac PF01000.26 gi|41615237|ref|NP_963735.1| - 3e-12 46.9 0.1 2.7e-11 43.8 0.1 2.2 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|41615237|ref|NP_963735.1| - 8.7e-07 28.3 0.0 1.3e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain V4R PF02830.18 gi|41615238|ref|NP_963736.1| - 6.3e-13 48.5 0.1 9.4e-13 48.0 0.1 1.3 1 0 0 1 1 1 1 V4R domain HTH_24 PF13412.6 gi|41615238|ref|NP_963736.1| - 2e-09 36.8 0.5 3.3e-09 36.1 0.5 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|41615238|ref|NP_963736.1| - 5.7e-08 32.6 0.3 1.4e-07 31.3 0.3 1.6 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|41615238|ref|NP_963736.1| - 1.1e-06 28.4 0.0 5.6e-06 26.1 0.0 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|41615238|ref|NP_963736.1| - 6.3e-05 22.8 0.2 0.00014 21.6 0.2 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|41615238|ref|NP_963736.1| - 8.2e-05 22.4 0.0 0.00019 21.2 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 gi|41615238|ref|NP_963736.1| - 0.00013 21.7 0.0 0.0003 20.5 0.0 1.6 1 0 0 1 1 1 1 HTH DNA binding domain HTH_23 PF13384.6 gi|41615238|ref|NP_963736.1| - 0.00016 21.3 0.0 0.00029 20.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain MarR_2 PF12802.7 gi|41615238|ref|NP_963736.1| - 0.00034 20.4 0.0 0.00053 19.8 0.0 1.3 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.16 gi|41615238|ref|NP_963736.1| - 0.00065 20.0 0.4 0.0011 19.3 0.4 1.4 1 0 0 1 1 1 1 Penicillinase repressor FaeA PF04703.12 gi|41615238|ref|NP_963736.1| - 0.00076 19.8 0.2 0.025 14.9 0.1 2.3 2 0 0 2 2 2 1 FaeA-like protein HTH_DeoR PF08220.12 gi|41615238|ref|NP_963736.1| - 0.0017 18.1 0.0 0.0031 17.2 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF2507 PF10702.9 gi|41615238|ref|NP_963736.1| - 0.0018 18.2 0.0 0.0091 15.9 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2507) Fe_dep_repress PF01325.19 gi|41615238|ref|NP_963736.1| - 0.0023 18.1 0.1 0.0072 16.5 0.1 1.9 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain LexA_DNA_bind PF01726.16 gi|41615238|ref|NP_963736.1| - 0.0036 17.0 0.1 0.0062 16.3 0.1 1.4 1 0 0 1 1 1 1 LexA DNA binding domain Rrf2 PF02082.20 gi|41615238|ref|NP_963736.1| - 0.0049 17.2 0.1 0.009 16.3 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator DUF3489 PF11994.8 gi|41615238|ref|NP_963736.1| - 0.022 14.8 0.0 0.087 12.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3489) HTH_20 PF12840.7 gi|41615238|ref|NP_963736.1| - 0.025 14.6 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MarR PF01047.22 gi|41615238|ref|NP_963736.1| - 0.027 14.4 0.1 0.056 13.4 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_40 PF14493.6 gi|41615238|ref|NP_963736.1| - 0.031 14.7 0.2 0.075 13.5 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|41615238|ref|NP_963736.1| - 0.032 13.7 0.0 0.079 12.5 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|41615238|ref|NP_963736.1| - 0.034 14.2 0.1 0.071 13.2 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 gi|41615238|ref|NP_963736.1| - 0.056 13.2 0.1 0.13 12.0 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_beta PF02186.15 gi|41615238|ref|NP_963736.1| - 0.07 13.4 1.3 0.16 12.3 0.2 2.0 2 0 0 2 2 2 0 TFIIE beta subunit core domain HTH_36 PF13730.6 gi|41615238|ref|NP_963736.1| - 0.084 12.8 0.1 0.21 11.6 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain NUDIX PF00293.28 gi|41615238|ref|NP_963736.1| - 0.12 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 NUDIX domain GerE PF00196.19 gi|41615238|ref|NP_963736.1| - 0.13 11.8 0.2 0.24 11.0 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_28 PF13518.6 gi|41615238|ref|NP_963736.1| - 0.14 12.3 0.0 0.35 11.0 0.0 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|41615238|ref|NP_963736.1| - 0.16 11.7 0.0 0.48 10.1 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 GntR PF00392.21 gi|41615238|ref|NP_963736.1| - 0.17 11.6 0.0 0.31 10.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family TruB_N PF01509.18 gi|41615239|ref|NP_963737.1| - 1.2e-23 84.1 3.8 2.4e-20 73.4 3.8 3.2 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|41615239|ref|NP_963737.1| - 7.4e-22 77.3 0.0 1.9e-21 76.0 0.0 1.7 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DKCLD PF08068.12 gi|41615239|ref|NP_963737.1| - 5.4e-21 74.4 0.1 9.6e-21 73.6 0.1 1.4 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|41615239|ref|NP_963737.1| - 9.1e-21 73.6 3.0 3.1e-20 71.9 1.2 2.8 3 0 0 3 3 3 1 PUA domain UPF0113 PF03657.13 gi|41615239|ref|NP_963737.1| - 0.066 13.5 0.1 0.21 11.9 0.1 1.9 1 0 0 1 1 1 0 UPF0113 PUA domain TctA PF01970.16 gi|41615240|ref|NP_963738.1| - 1.3e-09 37.3 24.0 2.5e-09 36.4 24.0 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family Choline_transpo PF04515.12 gi|41615240|ref|NP_963738.1| - 0.004 16.4 10.0 0.004 16.4 10.0 2.3 2 1 0 2 2 2 1 Plasma-membrane choline transporter tRNA-synt_1g PF09334.11 gi|41615241|ref|NP_963739.1| - 1.1e-130 435.9 2.0 6.4e-81 272.1 0.0 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|41615241|ref|NP_963739.1| - 8.2e-28 96.4 0.0 1.5e-27 95.5 0.0 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|41615241|ref|NP_963739.1| - 8.4e-13 47.4 0.2 2e-05 23.1 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|41615241|ref|NP_963739.1| - 2.5e-05 24.3 0.4 0.00099 19.1 0.1 2.5 1 1 1 2 2 2 1 Anticodon-binding domain of tRNA ADK_lid PF05191.14 gi|41615241|ref|NP_963739.1| - 0.1 12.6 0.2 1.3 9.1 0.0 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid zinc_ribbon_2 PF13240.6 gi|41615241|ref|NP_963739.1| - 0.7 9.7 3.8 5 7.0 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon domain TatD_DNase PF01026.21 gi|41615242|ref|NP_963740.1| - 3.2e-53 180.7 0.1 3.8e-53 180.5 0.1 1.1 1 0 0 1 1 1 1 TatD related DNase Big_7 PF17957.1 gi|41615243|ref|NP_963741.1| - 0.053 14.3 0.7 0.18 12.6 0.2 2.1 2 0 0 2 2 2 0 Bacterial Ig domain Thioredoxin_3 PF13192.6 gi|41615244|ref|NP_963742.1| - 1.4e-09 37.8 0.2 3.5e-09 36.6 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin domain Thioredoxin PF00085.20 gi|41615244|ref|NP_963742.1| - 0.00094 19.1 0.1 0.0022 17.9 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|41615244|ref|NP_963742.1| - 0.0011 19.4 0.2 0.014 15.9 0.2 2.4 1 1 0 1 1 1 1 Thioredoxin-like domain ABC_transp_aux PF09822.9 gi|41615244|ref|NP_963742.1| - 0.0014 18.2 0.0 0.82 9.1 0.0 2.1 2 0 0 2 2 2 2 ABC-type uncharacterized transport system Glutaredoxin PF00462.24 gi|41615244|ref|NP_963742.1| - 0.0026 17.9 0.1 0.0074 16.5 0.1 1.8 1 0 0 1 1 1 1 Glutaredoxin DUF935 PF06074.12 gi|41615244|ref|NP_963742.1| - 0.087 11.5 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF935) Thioredoxin_9 PF14595.6 gi|41615244|ref|NP_963742.1| - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin RIO1 PF01163.22 gi|41615245|ref|NP_963743.1| - 3.6e-51 173.4 0.1 4.5e-51 173.1 0.1 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|41615245|ref|NP_963743.1| - 0.00074 19.5 0.0 0.0038 17.2 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family FTA2 PF13095.6 gi|41615245|ref|NP_963743.1| - 0.0053 16.4 0.2 0.33 10.5 0.0 2.1 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pkinase PF00069.25 gi|41615245|ref|NP_963743.1| - 0.01 15.2 0.1 0.021 14.2 0.1 1.5 1 1 0 1 1 1 0 Protein kinase domain Kdo PF06293.14 gi|41615245|ref|NP_963743.1| - 0.014 14.7 0.1 0.83 9.0 0.0 2.2 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|41615245|ref|NP_963743.1| - 0.11 11.3 0.1 0.17 10.6 0.1 1.4 1 0 0 1 1 1 0 Fungal protein kinase Pyrophosphatase PF00719.19 gi|41615246|ref|NP_963744.1| - 4.9e-53 179.2 1.0 5.5e-53 179.0 1.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase DUF4987 PF16377.5 gi|41615247|ref|NP_963745.1| - 0.032 14.4 0.2 0.079 13.1 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function RIO1 PF01163.22 gi|41615248|ref|NP_963746.1| - 2.8e-40 137.9 0.6 2.8e-40 137.9 0.6 1.4 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|41615248|ref|NP_963746.1| - 6.6e-09 35.9 0.1 1.4e-08 34.8 0.1 1.6 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 gi|41615248|ref|NP_963746.1| - 2.1e-06 27.8 0.0 4.5e-06 26.8 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 gi|41615248|ref|NP_963746.1| - 0.00023 20.6 0.6 0.074 12.4 0.1 2.5 3 0 0 3 3 3 2 Lipopolysaccharide kinase (Kdo/WaaP) family Cullin_Nedd8 PF10557.9 gi|41615248|ref|NP_963746.1| - 0.00029 20.8 0.9 0.00093 19.2 0.9 1.8 1 0 0 1 1 1 1 Cullin protein neddylation domain Pkinase PF00069.25 gi|41615248|ref|NP_963746.1| - 0.0069 15.8 0.1 0.073 12.4 0.0 2.3 2 1 0 2 2 2 1 Protein kinase domain HTH_34 PF13601.6 gi|41615248|ref|NP_963746.1| - 0.0087 16.2 0.0 0.023 14.9 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain Kinase-PolyVal PF18762.1 gi|41615248|ref|NP_963746.1| - 0.032 14.2 0.2 2.3 8.2 0.0 2.8 2 1 1 3 3 3 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins LPD3 PF18798.1 gi|41615248|ref|NP_963746.1| - 1.1 9.6 6.9 0.25 11.6 1.6 2.4 1 1 1 3 3 3 0 Large polyvalent protein-associated domain 3 MMR_HSR1_C PF08438.10 gi|41615249|ref|NP_963747.1| - 1.9e-28 99.3 0.0 3.3e-28 98.5 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|41615249|ref|NP_963747.1| - 3.1e-22 78.8 0.0 7.8e-22 77.5 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|41615249|ref|NP_963747.1| - 9.8e-12 44.8 0.2 2.2e-11 43.6 0.2 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|41615249|ref|NP_963747.1| - 1.1e-06 28.2 0.1 6.6e-06 25.7 0.0 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|41615249|ref|NP_963747.1| - 0.00054 20.1 0.5 0.016 15.4 0.5 2.4 1 1 0 1 1 1 1 Protein of unknown function (DUF933) GTP_EFTU PF00009.27 gi|41615249|ref|NP_963747.1| - 0.032 13.8 0.1 7 6.1 0.0 2.9 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Lactamase_B PF00753.27 gi|41615250|ref|NP_963748.1| - 1.4e-18 67.6 0.0 2.1e-18 67.0 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|41615250|ref|NP_963748.1| - 1.5e-10 40.8 0.4 4.5e-09 36.1 0.0 3.1 3 0 0 3 3 3 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|41615250|ref|NP_963748.1| - 2.5e-08 33.7 0.0 4.1e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|41615250|ref|NP_963748.1| - 4.3e-05 22.8 0.6 9.2e-05 21.7 0.4 1.7 2 0 0 2 2 2 1 cAMP phosphodiesterases class-II Lactamase_B_6 PF16661.5 gi|41615250|ref|NP_963748.1| - 0.00091 18.7 0.0 0.002 17.6 0.0 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|41615250|ref|NP_963748.1| - 0.18 11.7 0.8 10 6.0 0.2 2.8 2 1 0 2 2 2 0 Beta-lactamase superfamily domain Ribosomal_S13 PF00416.22 gi|41615251|ref|NP_963749.1| - 1.6e-34 119.1 0.0 2e-34 118.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 DDE_Tnp_1_assoc PF13808.6 gi|41615251|ref|NP_963749.1| - 0.12 12.5 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 DDE_Tnp_1-associated Diphtheria_T PF02764.14 gi|41615251|ref|NP_963749.1| - 0.15 12.1 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain Bro-N PF02498.17 gi|41615251|ref|NP_963749.1| - 0.15 12.7 0.0 0.21 12.3 0.0 1.3 1 0 0 1 1 1 0 BRO family, N-terminal domain LPAM_1 PF08139.12 gi|41615252|ref|NP_963750.1| - 0.00056 20.2 0.9 0.0011 19.3 0.9 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site Ribosomal_S8e PF01201.22 gi|41615253|ref|NP_963751.1| - 8.8e-35 119.9 0.7 1e-34 119.7 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e DUF2304 PF10066.9 gi|41615254|ref|NP_963752.1| - 0.029 14.6 0.9 0.029 14.6 0.9 2.7 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Sec20 PF03908.13 gi|41615255|ref|NP_963753.1| - 0.035 14.0 0.3 0.035 14.0 0.3 2.2 3 0 0 3 3 3 0 Sec20 ABC2_membrane PF01061.24 gi|41615255|ref|NP_963753.1| - 0.17 11.2 9.1 0.38 10.2 2.5 2.2 2 0 0 2 2 2 0 ABC-2 type transporter Phage_holin_3_6 PF07332.11 gi|41615255|ref|NP_963753.1| - 0.78 9.8 7.8 0.58 10.2 0.6 2.5 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Metallophos PF00149.28 gi|41615256|ref|NP_963754.1| - 8e-15 55.9 3.0 1.4e-14 55.1 3.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|41615256|ref|NP_963754.1| - 1.2e-14 54.9 0.1 1.7e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|41615256|ref|NP_963754.1| - 0.0078 15.6 2.1 0.68 9.2 0.0 2.6 2 1 1 3 3 3 2 Metallophosphoesterase, calcineurin superfamily Tubulin PF00091.25 gi|41615257|ref|NP_963755.1| - 1.1e-37 130.1 0.0 1.8e-37 129.4 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|41615257|ref|NP_963755.1| - 1.2e-26 92.8 2.0 3.4e-26 91.4 0.0 2.6 3 0 0 3 3 3 1 FtsZ family, C-terminal domain DUF3419 PF11899.8 gi|41615257|ref|NP_963755.1| - 0.034 13.3 0.0 0.063 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3419) Tubulin_2 PF13809.6 gi|41615257|ref|NP_963755.1| - 0.35 10.0 5.2 5.7 6.0 0.1 2.4 1 1 0 2 2 2 0 Tubulin like AAA PF00004.29 gi|41615258|ref|NP_963756.1| - 4.5e-103 341.0 0.0 1e-50 171.6 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|41615258|ref|NP_963756.1| - 4.3e-30 103.3 0.7 6.4e-14 51.5 0.0 3.0 2 1 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|41615258|ref|NP_963756.1| - 3.3e-29 100.9 0.0 2.7e-28 97.9 0.0 2.6 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|41615258|ref|NP_963756.1| - 1.2e-16 60.9 0.0 1.9e-07 31.0 0.0 3.1 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|41615258|ref|NP_963756.1| - 6.6e-15 55.9 0.6 1.2e-06 29.0 0.0 3.9 3 1 0 3 3 2 2 AAA ATPase domain AAA_2 PF07724.14 gi|41615258|ref|NP_963756.1| - 1.2e-13 51.6 0.0 1.1e-05 25.6 0.0 2.6 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|41615258|ref|NP_963756.1| - 9.6e-13 48.3 1.3 1.8e-05 24.8 0.0 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) CDC48_2 PF02933.17 gi|41615258|ref|NP_963756.1| - 9.9e-11 41.3 0.0 4.5e-10 39.2 0.0 2.1 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_22 PF13401.6 gi|41615258|ref|NP_963756.1| - 1.3e-10 41.7 2.4 0.0024 18.1 0.0 4.5 2 2 2 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|41615258|ref|NP_963756.1| - 2.1e-10 40.7 0.0 0.0013 18.7 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|41615258|ref|NP_963756.1| - 2.2e-10 40.9 0.0 0.00028 21.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|41615258|ref|NP_963756.1| - 3.2e-10 39.7 0.1 0.00031 20.1 0.0 2.7 2 0 0 2 2 2 2 TIP49 P-loop domain Vps4_C PF09336.10 gi|41615258|ref|NP_963756.1| - 3.1e-09 36.7 3.7 6.9e-07 29.2 0.5 3.2 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|41615258|ref|NP_963756.1| - 7.9e-08 32.9 0.2 0.031 14.8 0.0 3.5 3 1 0 3 3 2 2 AAA domain AAA_24 PF13479.6 gi|41615258|ref|NP_963756.1| - 1.1e-07 31.8 0.2 0.031 14.0 0.0 3.7 3 1 0 3 3 3 2 AAA domain Sigma54_activat PF00158.26 gi|41615258|ref|NP_963756.1| - 1.7e-07 31.1 0.2 0.08 12.6 0.0 4.0 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_25 PF13481.6 gi|41615258|ref|NP_963756.1| - 4.8e-07 29.6 5.3 1.2 8.6 0.0 4.4 4 0 0 4 4 4 3 AAA domain IstB_IS21 PF01695.17 gi|41615258|ref|NP_963756.1| - 4.8e-07 29.7 0.0 0.032 14.0 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|41615258|ref|NP_963756.1| - 1.4e-06 28.7 0.0 0.013 15.8 0.0 2.9 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|41615258|ref|NP_963756.1| - 1.6e-06 27.7 0.5 0.054 12.9 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|41615258|ref|NP_963756.1| - 5.9e-06 26.6 0.0 0.095 13.1 0.0 2.7 2 0 0 2 2 2 2 RNA helicase TsaE PF02367.17 gi|41615258|ref|NP_963756.1| - 8.8e-06 25.7 0.0 0.22 11.5 0.0 2.6 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF815 PF05673.13 gi|41615258|ref|NP_963756.1| - 9.4e-06 25.0 0.0 0.074 12.2 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 gi|41615258|ref|NP_963756.1| - 1.9e-05 24.7 0.0 0.024 14.5 0.0 2.6 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_7 PF12775.7 gi|41615258|ref|NP_963756.1| - 2e-05 24.2 0.0 0.26 10.8 0.0 2.9 2 1 0 2 2 2 2 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|41615258|ref|NP_963756.1| - 8.9e-05 21.9 1.5 0.7 9.1 0.0 3.4 3 0 0 3 3 3 2 Zeta toxin Sigma54_activ_2 PF14532.6 gi|41615258|ref|NP_963756.1| - 0.00014 22.0 0.0 0.89 9.7 0.0 3.0 3 0 0 3 3 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.17 gi|41615258|ref|NP_963756.1| - 0.00017 20.8 0.1 0.18 10.9 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|41615258|ref|NP_963756.1| - 0.00017 21.1 1.3 0.44 10.0 0.1 2.5 2 0 0 2 2 2 2 PhoH-like protein ABC_tran PF00005.27 gi|41615258|ref|NP_963756.1| - 0.00019 22.0 0.0 1.1 9.8 0.0 3.0 3 1 0 3 3 3 2 ABC transporter AAA_3 PF07726.11 gi|41615258|ref|NP_963756.1| - 0.00029 20.7 0.0 0.44 10.4 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|41615258|ref|NP_963756.1| - 0.00085 18.6 0.1 1.1 8.4 0.0 3.0 3 0 0 3 3 3 1 NB-ARC domain AAA_17 PF13207.6 gi|41615258|ref|NP_963756.1| - 0.0011 19.4 0.0 2 8.9 0.0 3.2 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|41615258|ref|NP_963756.1| - 0.0014 18.6 15.6 0.065 13.1 0.1 5.4 4 2 1 5 5 4 1 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|41615258|ref|NP_963756.1| - 0.0015 18.5 1.9 2.3 8.1 0.1 3.6 4 0 0 4 4 3 1 NACHT domain Viral_helicase1 PF01443.18 gi|41615258|ref|NP_963756.1| - 0.0015 18.3 0.0 2.9 7.6 0.0 3.4 4 0 0 4 4 3 1 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|41615258|ref|NP_963756.1| - 0.0018 17.6 0.0 0.94 8.6 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|41615258|ref|NP_963756.1| - 0.0034 17.1 0.4 3.2 7.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 gi|41615258|ref|NP_963756.1| - 0.0063 15.9 16.8 0.39 10.0 0.1 5.3 5 2 1 7 7 7 2 KaiC AAA_11 PF13086.6 gi|41615258|ref|NP_963756.1| - 0.0075 16.1 3.2 2.4 7.9 0.0 2.9 2 1 0 2 2 2 1 AAA domain IPT PF01745.16 gi|41615258|ref|NP_963756.1| - 0.018 14.5 0.1 3.4 7.0 0.0 2.3 2 0 0 2 2 2 0 Isopentenyl transferase AFG1_ATPase PF03969.16 gi|41615258|ref|NP_963756.1| - 0.034 13.0 0.0 8 5.2 0.0 2.5 2 0 0 2 2 2 0 AFG1-like ATPase AAA_19 PF13245.6 gi|41615258|ref|NP_963756.1| - 0.088 13.1 6.0 5.9 7.2 0.0 3.5 4 1 1 5 5 2 0 AAA domain AAA_29 PF13555.6 gi|41615258|ref|NP_963756.1| - 0.1 12.4 0.0 18 5.2 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Zot PF05707.12 gi|41615258|ref|NP_963756.1| - 0.15 11.6 1.0 40 3.8 0.1 3.8 2 2 0 2 2 2 0 Zonular occludens toxin (Zot) SesA PF17107.5 gi|41615258|ref|NP_963756.1| - 0.28 11.4 2.4 0.62 10.3 0.4 2.5 2 0 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Na_Ca_ex_C PF16494.5 gi|41615258|ref|NP_963756.1| - 0.48 10.9 4.9 0.54 10.7 0.5 2.6 2 0 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain RNA_pol_Rpb5_C PF01191.19 gi|41615258|ref|NP_963756.1| - 0.52 10.2 3.2 17 5.4 0.0 3.7 3 0 0 3 3 3 0 RNA polymerase Rpb5, C-terminal domain Rad50_zn_hook PF04423.14 gi|41615258|ref|NP_963756.1| - 1.6 8.6 5.7 51 3.8 0.7 4.0 3 0 0 3 3 3 0 Rad50 zinc hook motif Mt_ATP-synt_D PF05873.12 gi|41615258|ref|NP_963756.1| - 2.6 7.9 11.4 0.53 10.1 0.5 2.9 3 0 0 3 3 2 0 ATP synthase D chain, mitochondrial (ATP5H) Mfa2 PF08842.10 gi|41615260|ref|NP_963758.1| - 0.022 14.4 0.1 0.038 13.6 0.1 1.3 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 FANCI_S1-cap PF14674.6 gi|41615260|ref|NP_963758.1| - 0.087 12.9 0.1 0.3 11.2 0.0 1.9 2 0 0 2 2 2 0 FANCI solenoid 1 cap Ribosomal_S4e PF00900.20 gi|41615262|ref|NP_963760.1| - 4.4e-20 71.4 1.5 4.4e-20 71.4 1.5 1.6 2 0 0 2 2 2 1 Ribosomal family S4e RS4NT PF08071.12 gi|41615262|ref|NP_963760.1| - 1.9e-14 53.4 3.9 3.4e-14 52.7 3.9 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|41615262|ref|NP_963760.1| - 4.4e-10 39.1 0.0 1.2e-09 37.7 0.0 1.8 2 0 0 2 2 2 1 S4 domain KOW PF00467.29 gi|41615262|ref|NP_963760.1| - 4.1e-05 23.4 0.2 0.00012 21.9 0.2 1.8 1 0 0 1 1 1 1 KOW motif DUF3912 PF13051.6 gi|41615262|ref|NP_963760.1| - 0.03 14.6 0.1 0.11 12.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3912) tRNA_synthFbeta PF17759.1 gi|41615263|ref|NP_963761.1| - 1e-22 80.6 0.0 1.1e-21 77.3 0.0 2.5 2 1 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain B3_4 PF03483.17 gi|41615263|ref|NP_963761.1| - 4.1e-10 39.6 0.1 7.4e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|41615263|ref|NP_963761.1| - 0.048 13.9 0.4 6.3 7.1 0.0 3.4 2 1 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain B5 PF03484.15 gi|41615263|ref|NP_963761.1| - 0.089 13.1 2.3 0.15 12.4 0.6 2.3 2 1 0 2 2 2 0 tRNA synthetase B5 domain Ribosomal_S19 PF00203.21 gi|41615264|ref|NP_963762.1| - 7e-31 105.9 0.7 1.1e-30 105.4 0.7 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 SMC_ScpA PF02616.14 gi|41615264|ref|NP_963762.1| - 0.045 13.6 0.0 0.053 13.4 0.0 1.0 1 0 0 1 1 1 0 Segregation and condensation protein ScpA DUF3131 PF11329.8 gi|41615264|ref|NP_963762.1| - 0.12 11.4 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3131) SAM_2 PF07647.17 gi|41615264|ref|NP_963762.1| - 0.21 11.7 0.8 0.89 9.7 0.1 2.0 1 1 1 2 2 2 0 SAM domain (Sterile alpha motif) Ribosomal_S3_C PF00189.20 gi|41615265|ref|NP_963763.1| - 2.1e-13 50.6 0.8 4.3e-13 49.6 0.8 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain MukF_C PF17193.4 gi|41615265|ref|NP_963763.1| - 2.1 8.5 4.2 1 9.5 0.3 2.3 3 0 0 3 3 3 0 MukF C-terminal domain TFIIE_alpha PF02002.17 gi|41615266|ref|NP_963764.1| - 7.3e-08 32.2 1.6 1.1e-07 31.6 1.6 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_9 PF08221.11 gi|41615266|ref|NP_963764.1| - 8.7e-06 25.7 0.1 1.6e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_DeoR PF08220.12 gi|41615266|ref|NP_963764.1| - 0.00023 20.8 0.2 0.00046 19.9 0.2 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 gi|41615266|ref|NP_963764.1| - 0.00082 18.9 0.3 0.0016 17.9 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TF_Zn_Ribbon PF08271.12 gi|41615266|ref|NP_963764.1| - 0.00083 18.8 0.4 0.0017 17.9 0.4 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_IclR PF09339.10 gi|41615266|ref|NP_963764.1| - 0.0012 18.6 0.0 0.0024 17.6 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|41615266|ref|NP_963764.1| - 0.0063 16.4 0.1 0.011 15.6 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|41615266|ref|NP_963764.1| - 0.0067 16.4 0.1 0.014 15.3 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TAN PF11640.8 gi|41615266|ref|NP_963764.1| - 0.011 15.9 0.2 1 9.5 0.1 2.1 1 1 1 2 2 2 0 Telomere-length maintenance and DNA damage repair DUF5343 PF17278.2 gi|41615266|ref|NP_963764.1| - 0.012 15.7 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5343) GntR PF00392.21 gi|41615266|ref|NP_963764.1| - 0.015 14.9 0.0 0.028 14.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|41615266|ref|NP_963764.1| - 0.016 15.1 0.4 0.029 14.3 0.4 1.5 1 0 0 1 1 1 0 HTH domain DUF2310 PF10071.9 gi|41615266|ref|NP_963764.1| - 0.021 14.1 0.2 0.09 12.0 0.1 1.9 2 0 0 2 2 2 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) zinc_ribbon_4 PF13717.6 gi|41615266|ref|NP_963764.1| - 0.023 14.6 0.4 0.053 13.5 0.4 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|41615266|ref|NP_963764.1| - 0.027 14.2 0.1 0.057 13.2 0.1 1.6 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein FUR PF01475.19 gi|41615266|ref|NP_963764.1| - 0.028 14.5 0.6 0.083 13.0 0.2 2.0 2 1 0 2 2 2 0 Ferric uptake regulator family RepL PF05732.11 gi|41615266|ref|NP_963764.1| - 0.043 13.3 0.1 0.051 13.0 0.1 1.4 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) DUF1610 PF07754.11 gi|41615266|ref|NP_963764.1| - 0.055 13.4 0.9 0.39 10.7 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-C2HC_2 PF13913.6 gi|41615266|ref|NP_963764.1| - 0.061 13.2 1.4 0.07 13.1 0.2 1.7 2 0 0 2 2 2 0 zinc-finger of a C2HC-type MutS_III PF05192.18 gi|41615266|ref|NP_963764.1| - 0.061 13.5 0.1 0.067 13.4 0.1 1.1 1 0 0 1 1 1 0 MutS domain III Zn-ribbon_8 PF09723.10 gi|41615266|ref|NP_963764.1| - 0.082 13.0 0.1 18 5.6 0.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain SMC_ScpB PF04079.16 gi|41615266|ref|NP_963764.1| - 0.11 12.2 1.1 0.85 9.2 0.1 2.3 1 1 2 3 3 3 0 Segregation and condensation complex subunit ScpB DUF2207 PF09972.9 gi|41615267|ref|NP_963765.1| - 0.24 10.1 3.9 0.3 9.8 3.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TIC20 PF16166.5 gi|41615267|ref|NP_963765.1| - 2.8 7.7 7.2 2.7 7.7 0.5 2.0 1 1 1 2 2 2 0 Chloroplast import apparatus Tic20-like DUF4870 PF09685.10 gi|41615267|ref|NP_963765.1| - 5.3 7.2 12.3 12 6.1 12.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) Spc7 PF08317.11 gi|41615268|ref|NP_963766.1| - 2.8e-05 23.1 12.1 3.8e-05 22.7 12.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein GAS PF13851.6 gi|41615268|ref|NP_963766.1| - 0.0011 18.4 10.2 0.0021 17.4 10.2 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding Baculo_PEP_C PF04513.12 gi|41615268|ref|NP_963766.1| - 0.0024 17.9 1.1 0.0087 16.1 1.1 1.9 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus FIBP PF05427.11 gi|41615268|ref|NP_963766.1| - 0.0041 16.5 4.6 0.0051 16.2 4.6 1.1 1 0 0 1 1 1 1 Acidic fibroblast growth factor binding (FIBP) BLOC1_2 PF10046.9 gi|41615268|ref|NP_963766.1| - 0.0052 17.0 7.5 0.07 13.4 7.2 2.3 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 gi|41615268|ref|NP_963766.1| - 0.007 16.8 6.1 0.0099 16.3 3.2 2.5 1 1 2 3 3 3 2 Nucleopolyhedrovirus P10 protein Exo70 PF03081.15 gi|41615268|ref|NP_963766.1| - 0.0082 15.2 2.0 0.0082 15.2 2.0 1.6 1 1 1 2 2 2 1 Exo70 exocyst complex subunit PI3K_P85_iSH2 PF16454.5 gi|41615268|ref|NP_963766.1| - 0.0094 15.6 8.2 0.016 14.8 8.2 1.4 1 0 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain COG2 PF06148.11 gi|41615268|ref|NP_963766.1| - 0.011 15.9 8.5 0.068 13.3 3.2 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CHDCT2 PF08074.11 gi|41615268|ref|NP_963766.1| - 0.011 15.9 4.4 0.011 15.9 4.4 1.3 2 0 0 2 2 1 0 CHDCT2 (NUC038) domain zf-C4H2 PF10146.9 gi|41615268|ref|NP_963766.1| - 0.012 15.9 4.5 0.012 15.9 4.5 2.1 1 1 1 2 2 2 0 Zinc finger-containing protein Syntaxin_2 PF14523.6 gi|41615268|ref|NP_963766.1| - 0.013 15.8 5.7 0.17 12.3 2.2 2.5 1 1 1 2 2 2 0 Syntaxin-like protein RNase_3_N PF18497.1 gi|41615268|ref|NP_963766.1| - 0.014 15.6 3.5 0.62 10.3 0.4 2.2 1 1 1 2 2 2 0 Ribonuclease III N-terminal domain DUF2884 PF11101.8 gi|41615268|ref|NP_963766.1| - 0.015 14.8 3.9 0.019 14.5 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) AlkA_N PF06029.11 gi|41615268|ref|NP_963766.1| - 0.019 15.2 0.1 0.029 14.6 0.1 1.4 1 0 0 1 1 1 0 AlkA N-terminal domain DivIC PF04977.15 gi|41615268|ref|NP_963766.1| - 0.02 14.7 2.8 0.02 14.7 2.8 2.3 2 1 0 2 2 1 0 Septum formation initiator Prominin PF05478.11 gi|41615268|ref|NP_963766.1| - 0.02 12.9 3.4 0.026 12.5 3.4 1.1 1 0 0 1 1 1 0 Prominin Adeno_100 PF02438.16 gi|41615268|ref|NP_963766.1| - 0.021 13.0 0.5 0.025 12.8 0.5 1.1 1 0 0 1 1 1 0 Late 100kD protein eIF-4B PF06273.11 gi|41615268|ref|NP_963766.1| - 0.024 13.7 4.1 0.031 13.4 4.1 1.2 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B FliJ PF02050.16 gi|41615268|ref|NP_963766.1| - 0.031 14.5 4.6 0.11 12.7 4.8 1.8 1 1 0 1 1 1 0 Flagellar FliJ protein DUF948 PF06103.11 gi|41615268|ref|NP_963766.1| - 0.034 14.4 2.3 0.14 12.4 2.1 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF2130 PF09903.9 gi|41615268|ref|NP_963766.1| - 0.035 13.4 6.4 0.071 12.4 6.4 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2130) Fzo_mitofusin PF04799.13 gi|41615268|ref|NP_963766.1| - 0.036 13.6 6.1 0.89 9.1 1.3 2.2 1 1 1 2 2 2 0 fzo-like conserved region TMPIT PF07851.13 gi|41615268|ref|NP_963766.1| - 0.039 13.2 4.3 0.048 12.9 4.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein HAP1_N PF04849.13 gi|41615268|ref|NP_963766.1| - 0.044 13.0 9.9 0.086 12.0 9.9 1.5 1 1 0 1 1 1 0 HAP1 N-terminal conserved region AAA_13 PF13166.6 gi|41615268|ref|NP_963766.1| - 0.045 12.4 5.6 0.059 12.0 5.6 1.1 1 0 0 1 1 1 0 AAA domain SKA2 PF16740.5 gi|41615268|ref|NP_963766.1| - 0.049 13.4 5.9 0.48 10.2 5.9 2.6 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 ApoLp-III PF07464.11 gi|41615268|ref|NP_963766.1| - 0.049 13.7 7.2 0.17 12.0 4.0 1.9 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DASH_Dam1 PF08653.10 gi|41615268|ref|NP_963766.1| - 0.058 13.2 2.7 4.9 7.0 0.2 3.4 1 1 3 4 4 4 0 DASH complex subunit Dam1 DUF87 PF01935.17 gi|41615268|ref|NP_963766.1| - 0.059 13.5 2.9 0.076 13.1 2.9 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain APG17 PF04108.12 gi|41615268|ref|NP_963766.1| - 0.06 12.5 6.0 0.032 13.4 2.3 1.9 1 1 1 2 2 2 0 Autophagy protein Apg17 Uds1 PF15456.6 gi|41615268|ref|NP_963766.1| - 0.068 13.3 4.3 0.06 13.5 2.8 1.7 1 1 0 1 1 1 0 Up-regulated During Septation Bacillus_HBL PF05791.11 gi|41615268|ref|NP_963766.1| - 0.069 13.0 6.1 0.069 13.0 4.1 1.8 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) SlyX PF04102.12 gi|41615268|ref|NP_963766.1| - 0.071 13.7 5.0 0.19 12.4 1.3 2.7 1 1 1 2 2 2 0 SlyX DUF3450 PF11932.8 gi|41615268|ref|NP_963766.1| - 0.073 12.4 7.9 0.066 12.5 5.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Laminin_II PF06009.12 gi|41615268|ref|NP_963766.1| - 0.078 13.0 9.7 0.036 14.1 6.0 1.9 1 1 1 2 2 2 0 Laminin Domain II SecA_DEAD PF07517.14 gi|41615268|ref|NP_963766.1| - 0.078 12.3 1.6 0.097 11.9 1.1 1.4 1 1 0 1 1 1 0 SecA DEAD-like domain DUF1664 PF07889.12 gi|41615268|ref|NP_963766.1| - 0.081 13.0 8.0 0.62 10.1 2.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) COG5 PF10392.9 gi|41615268|ref|NP_963766.1| - 0.085 13.0 2.7 0.13 12.4 2.7 1.4 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Seryl_tRNA_N PF02403.22 gi|41615268|ref|NP_963766.1| - 0.12 12.6 8.8 1.5 9.1 8.7 2.5 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Exonuc_VII_L PF02601.15 gi|41615268|ref|NP_963766.1| - 0.12 11.9 2.6 0.12 11.9 2.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ZYG-11_interact PF05884.12 gi|41615268|ref|NP_963766.1| - 0.13 11.6 0.6 0.15 11.4 0.6 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 Vps51 PF08700.11 gi|41615268|ref|NP_963766.1| - 0.14 12.3 4.6 0.45 10.6 0.2 2.9 2 1 0 3 3 2 0 Vps51/Vps67 V_ATPase_I PF01496.19 gi|41615268|ref|NP_963766.1| - 0.14 10.0 3.9 0.46 8.3 3.5 1.7 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF5621 PF18532.1 gi|41615268|ref|NP_963766.1| - 0.17 11.8 2.5 0.15 12.0 0.7 1.9 2 0 0 2 2 1 0 Domain of unknown function (DUF5621) YabA PF06156.13 gi|41615268|ref|NP_963766.1| - 0.2 12.3 6.6 1.1 10.0 2.6 2.8 2 1 1 3 3 2 0 Initiation control protein YabA Occludin_ELL PF07303.13 gi|41615268|ref|NP_963766.1| - 0.22 12.2 3.1 0.59 10.9 1.7 2.3 1 1 1 2 2 2 0 Occludin homology domain Filo_VP35 PF02097.15 gi|41615268|ref|NP_963766.1| - 0.23 10.5 2.3 0.29 10.1 2.3 1.3 1 1 0 1 1 1 0 Filoviridae VP35 Allexi_40kDa PF05549.11 gi|41615268|ref|NP_963766.1| - 0.24 10.9 2.6 0.29 10.6 2.1 1.4 1 1 0 1 1 1 0 Allexivirus 40kDa protein KxDL PF10241.9 gi|41615268|ref|NP_963766.1| - 0.24 11.7 4.4 4.9 7.5 0.1 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein Snapin_Pallidin PF14712.6 gi|41615268|ref|NP_963766.1| - 0.25 11.8 11.2 0.57 10.6 4.9 2.3 1 1 1 2 2 2 0 Snapin/Pallidin APG6_N PF17675.1 gi|41615268|ref|NP_963766.1| - 0.25 11.9 13.0 0.07 13.7 4.9 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Csm1_N PF18504.1 gi|41615268|ref|NP_963766.1| - 0.26 11.7 7.8 0.18 12.2 4.5 2.5 1 1 2 3 3 2 0 Csm1 N-terminal domain RecG_N PF17190.4 gi|41615268|ref|NP_963766.1| - 0.28 11.9 7.4 0.26 12.0 4.9 2.3 1 1 1 2 2 1 0 RecG N-terminal helical domain PspB PF06667.12 gi|41615268|ref|NP_963766.1| - 0.3 11.2 5.4 5.4 7.1 0.4 2.6 1 1 1 2 2 2 0 Phage shock protein B Sipho_Gp157 PF05565.11 gi|41615268|ref|NP_963766.1| - 0.35 10.9 9.2 2.2 8.3 7.0 2.2 1 1 1 2 2 2 0 Siphovirus Gp157 Tup_N PF08581.10 gi|41615268|ref|NP_963766.1| - 0.38 11.1 6.7 0.13 12.6 1.4 2.7 1 1 1 3 3 1 0 Tup N-terminal DUF3740 PF12548.8 gi|41615268|ref|NP_963766.1| - 0.41 11.1 3.8 0.73 10.3 3.7 1.8 1 1 0 1 1 1 0 Sulfatase protein DUF148 PF02520.17 gi|41615268|ref|NP_963766.1| - 0.42 10.7 8.6 0.29 11.3 5.7 1.9 1 1 1 2 2 2 0 Domain of unknown function DUF148 Hemagglutinin PF00509.18 gi|41615268|ref|NP_963766.1| - 0.45 8.9 2.4 0.45 8.8 1.5 1.3 1 1 0 1 1 1 0 Haemagglutinin Ferritin PF00210.24 gi|41615268|ref|NP_963766.1| - 0.47 10.4 5.0 9.4 6.2 2.7 2.2 1 1 0 2 2 2 0 Ferritin-like domain Atg14 PF10186.9 gi|41615268|ref|NP_963766.1| - 0.51 9.4 6.3 0.71 8.9 6.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FapA PF03961.13 gi|41615268|ref|NP_963766.1| - 0.75 8.3 9.2 0.2 10.2 4.1 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A SKA1 PF07160.12 gi|41615268|ref|NP_963766.1| - 0.85 9.4 8.8 0.15 11.9 3.3 2.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 LPP PF04728.13 gi|41615268|ref|NP_963766.1| - 0.89 10.0 7.8 4.4 7.8 2.7 3.4 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Fib_alpha PF08702.10 gi|41615268|ref|NP_963766.1| - 0.94 9.7 6.5 2.5 8.3 6.2 2.0 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ZapB PF06005.12 gi|41615268|ref|NP_963766.1| - 1.1 9.8 12.3 1.8 9.0 5.8 2.8 1 1 1 2 2 2 0 Cell division protein ZapB Swi5 PF07061.11 gi|41615268|ref|NP_963766.1| - 1.3 9.2 7.7 4.4 7.5 2.9 2.9 2 1 0 2 2 2 0 Swi5 Rx_N PF18052.1 gi|41615268|ref|NP_963766.1| - 1.4 9.3 7.7 2.9 8.2 4.7 2.6 1 1 1 2 2 2 0 Rx N-terminal domain DUF16 PF01519.16 gi|41615268|ref|NP_963766.1| - 1.4 9.5 8.8 7.6 7.1 8.7 2.0 1 1 0 1 1 1 0 Protein of unknown function DUF16 Prefoldin PF02996.17 gi|41615268|ref|NP_963766.1| - 1.4 8.9 8.7 0.92 9.4 1.9 3.1 2 1 0 3 3 2 0 Prefoldin subunit Prefoldin_2 PF01920.20 gi|41615268|ref|NP_963766.1| - 1.5 8.8 13.5 0.29 11.1 4.0 3.3 1 1 2 3 3 3 0 Prefoldin subunit CLZ PF16526.5 gi|41615268|ref|NP_963766.1| - 1.7 9.0 8.8 5.1 7.5 2.8 2.7 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels GrpE PF01025.19 gi|41615268|ref|NP_963766.1| - 1.8 8.2 10.8 15 5.2 10.4 2.1 1 1 0 1 1 1 0 GrpE Muted PF14942.6 gi|41615268|ref|NP_963766.1| - 1.8 8.9 11.0 5 7.4 7.7 2.4 1 1 2 3 3 3 0 Organelle biogenesis, Muted-like protein TBCA PF02970.16 gi|41615268|ref|NP_963766.1| - 2.1 8.7 11.7 0.085 13.2 4.3 2.3 2 1 1 3 3 2 0 Tubulin binding cofactor A ACCA PF03255.14 gi|41615268|ref|NP_963766.1| - 2.2 8.2 5.9 23 4.9 3.1 2.4 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FlxA PF14282.6 gi|41615268|ref|NP_963766.1| - 3 7.9 9.6 0.2 11.7 3.3 2.2 1 1 0 1 1 1 0 FlxA-like protein TSC22 PF01166.18 gi|41615268|ref|NP_963766.1| - 5.8 7.3 10.9 5 7.5 1.3 3.5 2 1 2 4 4 4 0 TSC-22/dip/bun family DUF2802 PF10975.8 gi|41615268|ref|NP_963766.1| - 8 6.7 7.4 1.8 8.7 0.9 2.8 2 1 1 3 3 2 0 Protein of unknown function (DUF2802) HIP1_clath_bdg PF16515.5 gi|41615268|ref|NP_963766.1| - 9.2 6.9 11.3 7.5 7.2 6.9 2.5 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Uso1_p115_C PF04871.13 gi|41615268|ref|NP_963766.1| - 10 6.5 13.1 0.18 12.1 5.1 2.0 2 1 1 3 3 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Na_Ca_ex PF01699.24 gi|41615270|ref|NP_963768.1| - 2.4e-45 154.2 34.0 1.2e-22 80.5 8.2 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Ribosomal_S13_N PF08069.12 gi|41615271|ref|NP_963769.1| - 4.3e-26 90.7 0.0 8.6e-26 89.8 0.0 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|41615271|ref|NP_963769.1| - 2.6e-12 46.8 0.6 4.1e-12 46.1 0.6 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Ribosomal_L27A PF00828.19 gi|41615272|ref|NP_963770.1| - 4.5e-05 24.1 0.5 0.0001 23.0 0.5 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A zinc_ribbon_4 PF13717.6 gi|298205315|ref|YP_003717793.1| - 0.001 18.9 15.3 0.58 10.1 0.6 4.0 3 1 1 4 4 4 2 zinc-ribbon domain Rhodanese_C PF12368.8 gi|298205315|ref|YP_003717793.1| - 0.002 18.5 7.6 0.0026 18.1 7.6 1.2 1 0 0 1 1 1 1 Rhodanase C-terminal zinc_ribbon_2 PF13240.6 gi|298205315|ref|YP_003717793.1| - 0.0037 16.9 17.4 0.08 12.7 0.3 3.9 4 0 0 4 4 4 2 zinc-ribbon domain DZR PF12773.7 gi|298205315|ref|YP_003717793.1| - 0.0046 17.0 12.8 0.16 12.0 13.1 2.4 1 1 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|298205315|ref|YP_003717793.1| - 0.0055 16.6 10.3 0.021 14.8 8.1 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|298205315|ref|YP_003717793.1| - 0.009 15.4 18.1 0.19 11.2 0.8 4.0 3 1 1 4 4 4 2 zinc-ribbon domain Zn_Tnp_IS91 PF14319.6 gi|298205315|ref|YP_003717793.1| - 0.013 15.6 8.8 0.035 14.1 8.9 1.7 1 1 0 1 1 1 0 Transposase zinc-binding domain HypA PF01155.19 gi|298205315|ref|YP_003717793.1| - 0.013 15.5 9.9 0.048 13.7 0.5 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|298205315|ref|YP_003717793.1| - 0.016 15.3 0.5 0.016 15.3 0.5 3.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF1451 PF07295.11 gi|298205315|ref|YP_003717793.1| - 0.017 15.2 0.6 0.017 15.2 0.6 2.5 1 1 2 3 3 3 0 Zinc-ribbon containing domain zinc_ribbon_10 PF10058.9 gi|298205315|ref|YP_003717793.1| - 0.018 14.8 15.4 0.36 10.6 2.7 3.7 2 2 1 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-ACC PF17848.1 gi|298205315|ref|YP_003717793.1| - 0.032 14.3 19.5 0.092 12.8 0.7 4.0 3 1 1 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-CHY PF05495.12 gi|298205315|ref|YP_003717793.1| - 0.048 14.2 7.5 0.44 11.1 7.5 2.0 1 1 0 1 1 1 0 CHY zinc finger NRDD PF13597.6 gi|298205315|ref|YP_003717793.1| - 0.078 11.7 9.8 0.048 12.4 2.2 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase PhnA_Zn_Ribbon PF08274.12 gi|298205315|ref|YP_003717793.1| - 0.098 12.6 13.9 5.9 6.9 0.6 3.8 2 1 1 3 3 3 0 PhnA Zinc-Ribbon zf-UBP PF02148.19 gi|298205315|ref|YP_003717793.1| - 0.1 12.9 1.6 0.1 12.9 1.6 2.2 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf_UBZ PF18439.1 gi|298205315|ref|YP_003717793.1| - 0.11 12.1 12.2 0.88 9.2 0.2 3.7 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-LSD1 PF06943.12 gi|298205315|ref|YP_003717793.1| - 0.11 12.3 3.5 0.11 12.3 3.5 2.7 2 1 1 3 3 3 0 LSD1 zinc finger zf-AN1 PF01428.16 gi|298205315|ref|YP_003717793.1| - 0.13 12.5 0.4 0.13 12.5 0.4 2.7 1 1 0 2 2 2 0 AN1-like Zinc finger PolC_DP2 PF03833.13 gi|298205315|ref|YP_003717793.1| - 0.18 9.6 5.7 0.2 9.5 5.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-C4_Topoisom PF01396.19 gi|298205315|ref|YP_003717793.1| - 0.2 11.5 0.3 0.2 11.5 0.3 3.4 3 1 1 4 4 3 0 Topoisomerase DNA binding C4 zinc finger UPF0547 PF10571.9 gi|298205315|ref|YP_003717793.1| - 0.23 11.6 17.0 2.7 8.2 0.2 3.7 3 1 1 4 4 4 0 Uncharacterised protein family UPF0547 DUF1610 PF07754.11 gi|298205315|ref|YP_003717793.1| - 0.37 10.8 19.5 0.65 10.0 0.3 3.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1610) Auto_anti-p27 PF06677.12 gi|298205315|ref|YP_003717793.1| - 0.42 10.8 14.5 0.15 12.3 7.7 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_ligase_ZBD PF03119.16 gi|298205315|ref|YP_003717793.1| - 0.46 10.6 0.4 0.46 10.6 0.4 3.5 3 1 1 4 4 3 0 NAD-dependent DNA ligase C4 zinc finger domain Rubredoxin_2 PF18073.1 gi|298205315|ref|YP_003717793.1| - 0.48 10.2 17.8 1.6 8.5 0.2 3.8 3 1 0 3 3 3 0 Rubredoxin metal binding domain Rubredoxin PF00301.20 gi|298205315|ref|YP_003717793.1| - 0.55 10.3 17.4 0.67 10.0 1.2 3.6 2 1 2 4 4 4 0 Rubredoxin A2L_zn_ribbon PF08792.10 gi|298205315|ref|YP_003717793.1| - 0.57 10.0 9.6 1.3 8.8 0.1 3.3 3 1 0 3 3 3 0 A2L zinc ribbon domain zf_C2H2_10 PF18414.1 gi|298205315|ref|YP_003717793.1| - 0.7 9.5 15.5 0.88 9.2 0.6 3.2 2 1 1 3 3 3 0 C2H2 type zinc-finger zf-Mss51 PF13824.6 gi|298205315|ref|YP_003717793.1| - 0.87 9.7 10.6 2.8 8.1 0.7 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 NMDAR2_C PF10565.9 gi|298205315|ref|YP_003717793.1| - 0.89 8.4 2.6 0.95 8.3 2.6 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus zf-H2C2_2 PF13465.6 gi|298205315|ref|YP_003717793.1| - 0.9 10.1 0.2 0.9 10.1 0.2 3.5 1 1 2 3 3 3 0 Zinc-finger double domain Ribosomal_L32p PF01783.23 gi|298205315|ref|YP_003717793.1| - 0.92 9.8 9.1 0.37 11.1 1.3 2.7 1 1 1 2 2 2 0 Ribosomal L32p protein family Zn_ribbon_SprT PF17283.2 gi|298205315|ref|YP_003717793.1| - 0.96 9.4 19.1 3.6 7.6 0.8 3.8 1 1 1 3 3 3 0 SprT-like zinc ribbon domain zf-NADH-PPase PF09297.11 gi|298205315|ref|YP_003717793.1| - 1.1 9.0 17.0 17 5.1 0.6 4.0 2 1 1 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37ae PF01780.19 gi|298205315|ref|YP_003717793.1| - 1.2 9.3 9.0 0.39 10.8 2.5 2.3 1 1 1 2 2 2 0 Ribosomal L37ae protein family NOB1_Zn_bind PF08772.11 gi|298205315|ref|YP_003717793.1| - 1.2 9.4 11.6 0.91 9.7 1.1 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-RanBP PF00641.18 gi|298205315|ref|YP_003717793.1| - 1.2 8.5 20.4 0.21 10.9 1.0 3.9 3 1 1 4 4 4 0 Zn-finger in Ran binding protein and others zf-FPG_IleRS PF06827.14 gi|298205315|ref|YP_003717793.1| - 1.2 9.0 16.2 42 4.1 0.1 3.9 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-C3HC4_3 PF13920.6 gi|298205315|ref|YP_003717793.1| - 1.4 8.8 14.1 48 3.9 14.1 2.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-TFIIB PF13453.6 gi|298205315|ref|YP_003717793.1| - 1.4 8.3 15.7 0.57 9.6 1.0 3.3 1 1 2 3 3 3 0 Transcription factor zinc-finger HscB_4_cys PF18256.1 gi|298205315|ref|YP_003717793.1| - 2 8.3 12.6 11 5.9 1.6 3.3 2 2 1 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif Prok-RING_1 PF14446.6 gi|298205315|ref|YP_003717793.1| - 2.5 8.1 16.3 1.6 8.7 2.6 3.0 1 1 2 3 3 3 0 Prokaryotic RING finger family 1 zf-RING_7 PF02591.15 gi|298205315|ref|YP_003717793.1| - 2.7 8.2 14.5 21 5.4 9.5 3.6 2 1 0 2 2 2 0 C4-type zinc ribbon domain DUF35_N PF12172.8 gi|298205315|ref|YP_003717793.1| - 2.9 7.9 15.0 17 5.4 0.1 3.6 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) FYVE_2 PF02318.16 gi|298205315|ref|YP_003717793.1| - 2.9 8.1 7.4 3.4 7.9 7.4 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Nudix_N_2 PF14803.6 gi|298205315|ref|YP_003717793.1| - 3.8 7.5 14.5 11 6.1 0.2 3.9 3 1 1 4 4 4 0 Nudix N-terminal Zn_Tnp_IS1595 PF12760.7 gi|298205315|ref|YP_003717793.1| - 3.9 7.5 19.4 1.4 8.9 0.6 3.6 1 1 2 3 3 3 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 gi|298205315|ref|YP_003717793.1| - 5.1 7.0 18.6 5 7.1 1.1 4.0 2 1 2 4 4 4 0 Transcription factor S-II (TFIIS) zf-DNL PF05180.12 gi|298205315|ref|YP_003717793.1| - 5.2 7.1 13.4 15 5.6 8.4 3.3 2 1 0 2 2 2 0 DNL zinc finger Zn_Tnp_IS1 PF03811.13 gi|298205315|ref|YP_003717793.1| - 6.1 6.7 17.5 2.9 7.7 0.2 3.9 3 1 1 4 4 4 0 InsA N-terminal domain CpXC PF14353.6 gi|298205315|ref|YP_003717793.1| - 8.2 6.5 14.2 6.2 6.9 0.3 3.5 1 1 3 4 4 4 0 CpXC protein DNA_RNApol_7kD PF03604.13 gi|298205315|ref|YP_003717793.1| - 9.9 5.9 14.8 0.86 9.3 2.0 3.1 1 1 2 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit Ogr_Delta PF04606.12 gi|298205315|ref|YP_003717793.1| - 9.9 6.2 14.7 4.2 7.4 0.2 3.4 4 0 0 4 4 3 0 Ogr/Delta-like zinc finger Methyltransf_23 PF13489.6 gi|41615273|ref|NP_963771.1| - 3.6e-10 39.9 0.0 5.6e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|41615273|ref|NP_963771.1| - 1.3e-08 35.4 0.0 4.1e-08 33.9 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|41615273|ref|NP_963771.1| - 9.1e-05 23.1 0.0 0.0049 17.5 0.0 2.4 1 1 1 2 2 2 2 Methyltransferase domain NodS PF05401.11 gi|41615273|ref|NP_963771.1| - 0.0037 16.9 0.0 0.0068 16.0 0.0 1.4 1 0 0 1 1 1 1 Nodulation protein S (NodS) DREV PF05219.12 gi|41615273|ref|NP_963771.1| - 0.0074 15.4 0.0 0.013 14.6 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_11 PF08241.12 gi|41615273|ref|NP_963771.1| - 0.014 16.0 0.0 0.041 14.5 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 gi|41615273|ref|NP_963771.1| - 0.03 14.1 0.1 0.33 10.7 0.1 2.1 1 1 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|41615273|ref|NP_963771.1| - 0.091 12.4 0.0 0.46 10.1 0.0 2.0 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW DUF1390 PF07150.11 gi|41615273|ref|NP_963771.1| - 0.095 12.4 0.5 0.15 11.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) PCMT PF01135.19 gi|41615273|ref|NP_963771.1| - 0.18 11.6 0.0 0.37 10.5 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Pyr_redox_2 PF07992.14 gi|41615274|ref|NP_963772.1| - 1.6e-51 175.3 1.3 1.9e-51 175.1 1.3 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|41615274|ref|NP_963772.1| - 2.4e-24 86.2 6.7 5.6e-21 75.1 1.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|41615274|ref|NP_963772.1| - 6.6e-19 68.3 4.3 1.5e-15 57.5 0.3 3.6 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|41615274|ref|NP_963772.1| - 4.4e-10 39.5 2.7 6.5e-08 32.3 0.1 2.7 2 2 0 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|41615274|ref|NP_963772.1| - 8.6e-10 38.3 3.6 9e-06 25.0 0.0 3.5 2 1 1 4 4 4 2 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|41615274|ref|NP_963772.1| - 1.2e-08 34.4 0.7 0.0029 16.7 0.0 3.0 1 1 1 3 3 3 2 Lycopene cyclase protein HI0933_like PF03486.14 gi|41615274|ref|NP_963772.1| - 2.8e-08 32.9 2.8 0.0045 15.7 0.1 4.2 4 1 0 5 5 5 2 HI0933-like protein DAO PF01266.24 gi|41615274|ref|NP_963772.1| - 5.5e-08 32.8 3.3 0.22 11.0 0.0 3.6 2 1 2 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|41615274|ref|NP_963772.1| - 2e-06 27.2 3.8 0.00036 19.7 0.2 4.0 2 1 3 5 5 5 1 FAD binding domain FAD_binding_3 PF01494.19 gi|41615274|ref|NP_963772.1| - 2.3e-06 27.1 0.9 0.00099 18.4 0.3 2.7 2 1 1 3 3 3 2 FAD binding domain NAD_binding_7 PF13241.6 gi|41615274|ref|NP_963772.1| - 3.5e-05 24.2 0.3 0.0066 16.9 0.4 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding K_oxygenase PF13434.6 gi|41615274|ref|NP_963772.1| - 0.00045 19.5 0.5 0.5 9.4 0.0 2.8 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 gi|41615274|ref|NP_963772.1| - 0.0013 18.0 0.4 0.01 15.1 0.0 2.4 2 1 1 3 3 3 1 Thi4 family NAD_binding_9 PF13454.6 gi|41615274|ref|NP_963772.1| - 0.004 17.2 3.6 0.44 10.5 0.0 3.3 3 1 0 3 3 3 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|41615274|ref|NP_963772.1| - 0.011 15.9 0.4 0.088 13.1 0.4 2.3 2 1 0 2 2 2 0 NAD(P)-binding Rossmann-like domain PHD_like PF12910.7 gi|41615274|ref|NP_963772.1| - 0.032 14.2 0.3 0.057 13.4 0.3 1.3 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system EstA_Ig_like PF18435.1 gi|41615274|ref|NP_963772.1| - 0.067 13.4 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 Esterase Ig-like N-terminal domain Trp_halogenase PF04820.14 gi|41615274|ref|NP_963772.1| - 2.2 7.0 6.4 4.1 6.1 0.3 3.0 3 1 1 4 4 4 0 Tryptophan halogenase DUF2807 PF10988.8 gi|41615275|ref|NP_963773.1| - 0.00069 19.5 2.5 0.00097 19.0 2.5 1.1 1 0 0 1 1 1 1 Putative auto-transporter adhesin, head GIN domain Bactofilin PF04519.13 gi|41615275|ref|NP_963773.1| - 0.0021 18.3 2.3 0.041 14.2 2.3 2.1 1 1 0 1 1 1 1 Polymer-forming cytoskeletal T2SSB PF16537.5 gi|41615275|ref|NP_963773.1| - 0.3 10.7 1.0 3.2 7.4 0.2 2.2 2 0 0 2 2 2 0 Type II secretion system protein B Phage_spike PF18715.1 gi|41615275|ref|NP_963773.1| - 0.45 10.6 9.6 1.2 9.3 0.3 3.8 2 1 2 4 4 4 0 Phage spike trimer Peptidase_M22 PF00814.25 gi|41615276|ref|NP_963774.1| - 1.3e-68 231.7 0.0 1.6e-68 231.4 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|41615276|ref|NP_963774.1| - 2.9e-06 27.2 0.1 0.00083 19.1 0.0 2.1 2 0 0 2 2 2 2 Carbamoyltransferase N-terminus BcrAD_BadFG PF01869.20 gi|41615276|ref|NP_963774.1| - 0.053 13.0 0.0 0.35 10.3 0.0 1.9 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family FGGY_N PF00370.21 gi|41615276|ref|NP_963774.1| - 0.18 11.4 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Radical_SAM PF04055.21 gi|41615277|ref|NP_963775.1| - 4.5e-21 75.9 0.7 1.5e-20 74.3 0.0 2.1 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|41615277|ref|NP_963775.1| - 7.7e-08 32.7 0.6 1.4e-07 31.8 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|41615277|ref|NP_963775.1| - 0.0034 17.5 0.0 0.0073 16.4 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DZR PF12773.7 gi|41615277|ref|NP_963775.1| - 0.0035 17.3 0.2 0.0035 17.3 0.2 2.5 3 0 0 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|41615277|ref|NP_963775.1| - 0.13 12.0 12.8 0.15 11.8 0.4 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf-IS66 PF13005.7 gi|41615277|ref|NP_963775.1| - 0.34 11.3 3.5 4.3 7.8 0.0 3.1 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 Auto_anti-p27 PF06677.12 gi|41615277|ref|NP_963775.1| - 0.35 11.1 0.0 0.35 11.1 0.0 2.3 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C4_Topoisom PF01396.19 gi|41615277|ref|NP_963775.1| - 0.41 10.5 0.1 0.41 10.5 0.1 3.0 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 gi|41615277|ref|NP_963775.1| - 0.7 9.4 12.7 0.15 11.5 0.4 3.1 3 0 0 3 3 3 0 zinc-ribbon domain zf-ISL3 PF14690.6 gi|41615277|ref|NP_963775.1| - 5.6 7.7 6.8 14 6.4 0.1 3.0 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Helicase_RecD PF05127.14 gi|41615278|ref|NP_963776.1| - 7.1e-52 175.8 0.0 1.5e-51 174.7 0.0 1.6 1 0 0 1 1 1 1 Helicase DUF1726 PF08351.11 gi|41615278|ref|NP_963776.1| - 3.1e-33 113.6 0.0 2.7e-31 107.4 0.0 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) GNAT_acetyltr_2 PF13718.6 gi|41615278|ref|NP_963776.1| - 2.2e-09 37.1 0.2 4.3e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 GNAT acetyltransferase 2 AAA_22 PF13401.6 gi|41615278|ref|NP_963776.1| - 0.015 15.6 0.0 2.7 8.3 0.0 2.7 2 0 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 gi|41615279|ref|NP_963777.1| - 1.3e-36 125.9 0.0 4.9e-36 124.1 0.0 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|41615279|ref|NP_963777.1| - 2.6e-24 85.0 5.1 2.6e-24 85.0 5.1 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|41615279|ref|NP_963777.1| - 3.3e-14 52.9 9.4 4.9e-14 52.3 5.4 2.9 2 1 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|41615279|ref|NP_963777.1| - 9.8e-09 35.5 5.2 3.8e-06 27.2 0.0 3.2 3 0 0 3 3 3 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|41615279|ref|NP_963777.1| - 3e-08 33.7 0.2 1.2e-07 31.8 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 gi|41615279|ref|NP_963777.1| - 0.0043 17.3 0.0 0.012 15.8 0.0 1.8 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 gi|41615279|ref|NP_963777.1| - 0.0077 16.0 0.0 0.034 13.9 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Ras PF00071.22 gi|41615279|ref|NP_963777.1| - 0.088 12.4 0.0 0.28 10.8 0.0 1.9 1 1 0 1 1 1 0 Ras family cobW PF02492.19 gi|41615279|ref|NP_963777.1| - 0.09 12.4 0.5 11 5.6 0.2 2.6 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RTT107_BRCT_6 PF16771.5 gi|41615279|ref|NP_963777.1| - 2.2 8.4 5.8 0.41 10.8 0.8 2.4 2 1 1 3 3 3 0 Regulator of Ty1 transposition protein 107 BRCT domain TCP PF03634.13 gi|41615280|ref|NP_963778.1| - 0.0072 16.9 0.1 0.011 16.3 0.1 1.3 1 1 0 1 1 1 1 TCP family transcription factor CCDC53 PF10152.9 gi|41615280|ref|NP_963778.1| - 0.018 15.5 0.7 0.03 14.8 0.7 1.5 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex XhlA PF10779.9 gi|41615280|ref|NP_963778.1| - 5 7.4 11.5 30 4.9 0.1 3.0 2 1 0 2 2 2 0 Haemolysin XhlA UPF0113 PF03657.13 gi|41615281|ref|NP_963779.1| - 4e-15 55.8 1.3 6.3e-15 55.2 1.3 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain Methyltranf_PUA PF13636.6 gi|41615281|ref|NP_963779.1| - 0.0026 17.7 1.6 0.0049 16.8 1.6 1.5 1 1 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF Laminin_G_3 PF13385.6 gi|41615282|ref|NP_963780.1| - 1.6e-16 60.8 1.5 3e-16 59.9 0.9 1.8 1 1 1 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily Laminin_G_2 PF02210.24 gi|41615282|ref|NP_963780.1| - 0.00025 21.6 0.0 0.0005 20.7 0.0 1.6 1 1 0 1 1 1 1 Laminin G domain LigT_PEase PF02834.16 gi|41615283|ref|NP_963781.1| - 4.3e-27 94.1 0.0 1.1e-17 64.0 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|41615283|ref|NP_963781.1| - 1.3e-10 41.4 0.0 1.6e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|41615283|ref|NP_963781.1| - 0.00011 22.1 0.0 0.0016 18.4 0.0 2.1 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain SANT_DAMP1_like PF16282.5 gi|41615283|ref|NP_963781.1| - 0.019 15.1 0.1 0.019 15.1 0.1 1.9 2 0 0 2 2 2 0 SANT/Myb-like domain of DAMP1 HVSL PF09749.9 gi|41615283|ref|NP_963781.1| - 0.044 13.2 0.0 0.075 12.5 0.0 1.3 1 1 0 1 1 1 0 Uncharacterised conserved protein CorA PF01544.18 gi|41615284|ref|NP_963782.1| - 5.3e-18 65.3 9.1 2.2e-17 63.3 9.1 1.7 1 1 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF919 PF06034.11 gi|41615284|ref|NP_963782.1| - 0.055 13.3 0.9 0.055 13.3 0.9 1.9 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF2207 PF09972.9 gi|41615284|ref|NP_963782.1| - 0.1 11.3 5.4 0.13 11.0 5.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1108 PF06531.11 gi|41615284|ref|NP_963782.1| - 1 9.7 6.9 2.5 8.4 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1108) RNA_pol_Rpb1_1 PF04997.12 gi|41615286|ref|NP_963784.1| - 1.2e-87 294.1 0.0 1.9e-87 293.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|41615286|ref|NP_963784.1| - 4.2e-65 219.0 0.0 9.9e-65 217.8 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|41615286|ref|NP_963784.1| - 1e-26 93.0 0.1 3.3e-26 91.4 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|41615286|ref|NP_963784.1| - 2.1e-26 92.8 0.1 4.1e-26 91.8 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|41615286|ref|NP_963784.1| - 5.4e-19 68.7 0.1 1.7e-18 67.1 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 Rad50_zn_hook PF04423.14 gi|41615286|ref|NP_963784.1| - 0.011 15.5 0.4 0.011 15.5 0.4 4.0 4 0 0 4 4 4 0 Rad50 zinc hook motif MnmE_helical PF12631.7 gi|41615286|ref|NP_963784.1| - 0.018 15.2 0.3 0.057 13.6 0.1 1.9 2 0 0 2 2 2 0 MnmE helical domain DZR PF12773.7 gi|41615286|ref|NP_963784.1| - 0.058 13.4 1.0 1.8 8.7 1.1 2.3 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_7 PF02591.15 gi|41615286|ref|NP_963784.1| - 0.26 11.5 0.7 6.9 6.9 0.0 2.7 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf_UBZ PF18439.1 gi|41615286|ref|NP_963784.1| - 0.72 9.5 2.7 1.4 8.6 0.2 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger NFACT-R_1 PF05670.13 gi|41615287|ref|NP_963785.1| - 1.2e-22 80.6 0.0 2e-22 79.9 0.0 1.4 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|41615287|ref|NP_963785.1| - 0.0012 19.0 1.4 0.18 12.0 0.0 2.9 2 1 0 2 2 2 1 NFACT protein RNA binding domain FbpA PF05833.11 gi|41615287|ref|NP_963785.1| - 0.011 14.5 5.6 0.021 13.6 5.6 1.5 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) N6_N4_Mtase PF01555.18 gi|41615287|ref|NP_963785.1| - 0.075 12.7 1.5 0.13 12.0 1.3 1.5 1 1 0 1 1 1 0 DNA methylase Hormone_1 PF00103.20 gi|41615287|ref|NP_963785.1| - 0.15 11.8 0.8 0.27 10.9 0.8 1.4 1 0 0 1 1 1 0 Somatotropin hormone family ACR_tran PF00873.19 gi|41615287|ref|NP_963785.1| - 0.15 9.7 0.0 4.8 4.7 0.0 2.0 2 0 0 2 2 2 0 AcrB/AcrD/AcrF family Hydrolase_3 PF08282.12 gi|41615287|ref|NP_963785.1| - 0.32 10.7 5.1 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Ribosomal_S19 PF00203.21 gi|41615287|ref|NP_963785.1| - 0.94 9.4 3.6 0.68 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein S19 tRNA-synt_2d PF01409.20 gi|41615288|ref|NP_963786.1| - 1.1e-59 201.9 0.0 1.8e-59 201.2 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) HTH_45 PF14947.6 gi|41615288|ref|NP_963786.1| - 9e-06 25.6 3.8 0.019 14.9 0.9 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix tRNA-synt_2 PF00152.20 gi|41615288|ref|NP_963786.1| - 0.00019 20.6 0.1 0.13 11.3 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 gi|41615288|ref|NP_963786.1| - 0.0015 18.0 0.0 0.0033 16.9 0.0 1.5 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain DUF3116 PF11313.8 gi|41615288|ref|NP_963786.1| - 0.0026 17.6 0.5 0.0068 16.2 0.5 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) TFIIE_alpha PF02002.17 gi|41615288|ref|NP_963786.1| - 0.0032 17.3 0.7 0.0032 17.3 0.7 2.5 2 0 0 2 2 2 1 TFIIE alpha subunit AAA_assoc_C PF09821.9 gi|41615288|ref|NP_963786.1| - 0.011 16.3 0.2 0.86 10.1 0.1 2.6 1 1 1 2 2 2 0 C-terminal AAA-associated domain HTH_Crp_2 PF13545.6 gi|41615288|ref|NP_963786.1| - 0.028 14.4 0.2 0.59 10.2 0.0 2.9 3 1 0 3 3 3 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|41615288|ref|NP_963786.1| - 0.066 13.1 6.4 0.67 9.9 2.5 2.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF4364 PF14277.6 gi|41615288|ref|NP_963786.1| - 0.096 12.4 2.6 0.14 11.9 0.1 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4364) SUKH_6 PF14568.6 gi|41615288|ref|NP_963786.1| - 0.099 13.1 1.9 0.64 10.5 1.9 2.5 1 1 0 1 1 1 0 SMI1-KNR4 cell-wall Rrf2 PF02082.20 gi|41615288|ref|NP_963786.1| - 0.23 11.8 1.0 2.5 8.5 0.1 2.8 3 0 0 3 3 3 0 Transcriptional regulator DUF2250 PF10007.9 gi|41615288|ref|NP_963786.1| - 3 8.0 9.6 5.4 7.2 0.3 3.7 2 2 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) zinc_ribbon_4 PF13717.6 gi|298205316|ref|YP_003717794.1| - 8.6e-05 22.4 4.1 0.00014 21.7 4.1 1.3 1 0 0 1 1 1 1 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|298205316|ref|YP_003717794.1| - 0.00098 19.2 1.0 0.0016 18.5 1.0 1.3 1 0 0 1 1 1 1 Zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|298205316|ref|YP_003717794.1| - 0.0036 17.0 2.9 0.0061 16.3 2.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain HypA PF01155.19 gi|298205316|ref|YP_003717794.1| - 0.011 15.8 0.4 0.011 15.8 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Anti-TRAP PF15777.5 gi|298205316|ref|YP_003717794.1| - 0.012 15.5 0.2 0.016 15.1 0.2 1.1 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein OrfB_Zn_ribbon PF07282.11 gi|298205316|ref|YP_003717794.1| - 0.012 15.5 3.6 1.7 8.6 0.3 2.1 1 1 2 3 3 3 0 Putative transposase DNA-binding domain DZR PF12773.7 gi|298205316|ref|YP_003717794.1| - 0.019 15.0 0.9 0.027 14.5 0.9 1.3 1 1 0 1 1 1 0 Double zinc ribbon Mu-like_Com PF10122.9 gi|298205316|ref|YP_003717794.1| - 0.02 14.4 2.0 0.031 13.7 2.0 1.4 1 0 0 1 1 1 0 Mu-like prophage protein Com DUF2072 PF09845.9 gi|298205316|ref|YP_003717794.1| - 0.026 14.8 0.5 0.034 14.4 0.5 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein zf_UBZ PF18439.1 gi|298205316|ref|YP_003717794.1| - 0.028 14.0 2.5 1.4 8.6 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_9 PF14369.6 gi|298205316|ref|YP_003717794.1| - 0.037 14.3 0.9 0.056 13.7 0.9 1.3 1 0 0 1 1 1 0 zinc-ribbon Zn_ribbon_17 PF17120.5 gi|298205316|ref|YP_003717794.1| - 0.047 13.3 2.3 0.11 12.2 2.3 1.6 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Zn_Tnp_IS1595 PF12760.7 gi|298205316|ref|YP_003717794.1| - 0.078 13.0 6.0 0.56 10.2 0.4 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF4379 PF14311.6 gi|298205316|ref|YP_003717794.1| - 0.11 12.9 1.1 0.13 12.7 1.1 1.1 1 0 0 1 1 1 0 Probable Zinc-ribbon domain zf-HIT PF04438.16 gi|298205316|ref|YP_003717794.1| - 0.22 11.4 0.6 0.22 11.4 0.6 2.4 2 1 0 2 2 2 0 HIT zinc finger zf-C2H2 PF00096.26 gi|298205316|ref|YP_003717794.1| - 0.38 11.3 3.9 5.9 7.5 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type TFIIS_C PF01096.18 gi|298205316|ref|YP_003717794.1| - 0.47 10.3 4.7 8.2 6.4 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) RNA_pol_Rpb5_C PF01191.19 gi|41615289|ref|NP_963787.1| - 6.8e-26 89.9 1.0 1e-25 89.4 1.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain PASTA PF03793.19 gi|41615289|ref|NP_963787.1| - 0.0048 16.7 0.3 0.017 15.0 0.3 1.8 1 1 0 1 1 1 1 PASTA domain Sigma54_CBD PF04963.13 gi|41615289|ref|NP_963787.1| - 0.039 13.8 0.2 0.044 13.6 0.2 1.1 1 0 0 1 1 1 0 Sigma-54 factor, core binding domain EF-hand_10 PF14788.6 gi|41615289|ref|NP_963787.1| - 0.099 12.5 0.2 0.15 12.0 0.2 1.3 1 0 0 1 1 1 0 EF hand Ribosomal_S2 PF00318.20 gi|41615290|ref|NP_963788.1| - 1.9e-24 86.1 0.0 6.4e-13 48.4 0.1 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 DNA_ligase_A_M PF01068.21 gi|41615291|ref|NP_963789.1| - 4.7e-54 183.1 4.5 5.7e-54 182.9 3.0 2.0 2 0 0 2 2 2 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|41615291|ref|NP_963789.1| - 3e-35 122.1 3.4 5.2e-35 121.3 2.2 2.0 3 0 0 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|41615291|ref|NP_963789.1| - 7.6e-18 64.9 0.0 1.8e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region mRNA_cap_enzyme PF01331.19 gi|41615291|ref|NP_963789.1| - 0.017 15.0 0.1 0.12 12.1 0.1 2.3 1 1 0 1 1 1 0 mRNA capping enzyme, catalytic domain DUF4294 PF14127.6 gi|41615291|ref|NP_963789.1| - 0.053 13.4 0.4 0.053 13.4 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4294) 7tm_3 PF00003.22 gi|41615292|ref|NP_963790.1| - 0.021 14.5 9.6 0.042 13.6 9.7 1.5 1 1 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR GerA PF03323.13 gi|41615292|ref|NP_963790.1| - 4.9 5.5 9.1 15 3.9 5.9 2.0 1 1 1 2 2 2 0 Bacillus/Clostridium GerA spore germination protein Peptidase_M20 PF01546.28 gi|41615293|ref|NP_963791.1| - 5.1e-26 91.6 0.1 6.8e-26 91.3 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|41615293|ref|NP_963791.1| - 2.5e-14 53.1 0.3 5.2e-14 52.1 0.0 1.7 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|41615293|ref|NP_963791.1| - 0.0061 16.3 0.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 2 Peptidase family M28 S6PP PF05116.13 gi|41615293|ref|NP_963791.1| - 0.023 14.2 0.0 0.052 13.1 0.0 1.5 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase DUF87 PF01935.17 gi|41615294|ref|NP_963792.1| - 6e-09 36.3 0.1 4.9e-08 33.4 0.1 2.4 1 1 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|41615294|ref|NP_963792.1| - 4e-08 32.3 0.0 4.6e-05 22.2 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.18 gi|41615294|ref|NP_963792.1| - 2.3e-07 30.4 0.1 0.00075 18.9 0.0 2.1 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA PF00004.29 gi|41615294|ref|NP_963792.1| - 0.0011 19.4 2.0 0.019 15.4 0.1 2.6 2 1 1 3 3 3 1 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 gi|41615294|ref|NP_963792.1| - 0.0049 15.8 0.0 0.27 10.1 0.0 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Helicase_RecD PF05127.14 gi|41615294|ref|NP_963792.1| - 0.015 15.2 0.0 0.071 13.0 0.0 1.9 2 0 0 2 2 2 0 Helicase AAA_22 PF13401.6 gi|41615294|ref|NP_963792.1| - 0.015 15.5 0.1 0.27 11.5 0.1 2.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|41615294|ref|NP_963792.1| - 0.058 13.8 0.0 0.45 10.9 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|41615294|ref|NP_963792.1| - 0.067 12.9 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|41615294|ref|NP_963792.1| - 0.07 13.1 1.0 1.2 9.1 1.0 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_14 PF13173.6 gi|41615294|ref|NP_963792.1| - 0.086 12.9 0.3 4.3 7.4 0.0 2.5 2 1 0 2 2 2 0 AAA domain Glu-tRNAGln PF02686.15 gi|41615295|ref|NP_963793.1| - 4.6e-06 26.8 0.3 5.8e-06 26.5 0.3 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Ubiquitin_2 PF14560.6 gi|41615296|ref|NP_963794.1| - 0.63 10.5 2.3 4.2 7.9 0.1 3.1 2 2 1 3 3 3 0 Ubiquitin-like domain AGOG PF09171.10 gi|41615297|ref|NP_963795.1| - 7.8e-47 159.7 6.1 8e-39 133.5 2.3 2.1 1 1 1 2 2 2 2 N-glycosylase/DNA lyase Prefoldin_2 PF01920.20 gi|41615298|ref|NP_963796.1| - 4.7e-13 49.0 13.0 5.5e-13 48.8 13.0 1.0 1 0 0 1 1 1 1 Prefoldin subunit Helicase_C_3 PF13625.6 gi|41615298|ref|NP_963796.1| - 0.032 14.4 0.2 0.26 11.5 0.0 1.9 1 1 1 2 2 2 0 Helicase conserved C-terminal domain Prefoldin PF02996.17 gi|41615298|ref|NP_963796.1| - 0.11 12.4 10.6 0.12 12.2 2.9 2.1 1 1 1 2 2 2 0 Prefoldin subunit PEARLI-4 PF05278.12 gi|41615298|ref|NP_963796.1| - 0.15 11.6 9.3 0.23 11.0 9.3 1.3 1 1 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Laminin_II PF06009.12 gi|41615298|ref|NP_963796.1| - 0.23 11.5 4.8 0.32 11.0 4.8 1.2 1 0 0 1 1 1 0 Laminin Domain II DASH_Dad4 PF08650.10 gi|41615298|ref|NP_963796.1| - 0.82 9.7 5.8 0.32 11.0 0.8 2.0 2 0 0 2 2 2 0 DASH complex subunit Dad4 DUF5320 PF17253.2 gi|41615298|ref|NP_963796.1| - 0.84 10.7 9.9 3.6 8.7 0.9 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5320) FlaC_arch PF05377.11 gi|41615298|ref|NP_963796.1| - 1.6 9.2 8.6 1.1 9.7 1.1 2.2 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4164 PF13747.6 gi|41615298|ref|NP_963796.1| - 2.2 8.6 9.4 3.7 7.9 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) FapA PF03961.13 gi|41615298|ref|NP_963796.1| - 3.6 6.1 10.7 4 5.9 10.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Vir_act_alpha_C PF10400.9 gi|41615298|ref|NP_963796.1| - 5 7.9 8.9 5.5 7.7 2.1 2.1 1 1 1 2 2 2 0 Virulence activator alpha C-term eIF-6 PF01912.18 gi|41615300|ref|NP_963798.1| - 1e-37 129.5 0.4 1.9e-37 128.6 0.4 1.4 1 1 0 1 1 1 1 eIF-6 family HIT PF01230.23 gi|41615301|ref|NP_963799.1| - 1.7e-29 102.5 0.1 2.4e-29 102.0 0.1 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|41615301|ref|NP_963799.1| - 6.5e-19 68.5 1.1 7.9e-19 68.2 1.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 gi|41615301|ref|NP_963799.1| - 7.2e-05 22.6 0.2 0.00012 21.8 0.2 1.5 1 1 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain CwfJ_C_1 PF04677.15 gi|41615301|ref|NP_963799.1| - 0.00073 19.4 0.3 0.00097 19.0 0.3 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Imm3 PF14425.6 gi|41615301|ref|NP_963799.1| - 0.0082 16.2 0.2 0.074 13.1 0.0 2.1 2 0 0 2 2 2 1 Immunity protein Imm3 DUF4931 PF16285.5 gi|41615301|ref|NP_963799.1| - 0.024 13.9 0.2 0.026 13.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) PASTA PF03793.19 gi|41615301|ref|NP_963799.1| - 0.028 14.3 0.2 0.3 11.0 0.0 2.1 2 0 0 2 2 2 0 PASTA domain Cas_DxTHG PF09455.10 gi|41615301|ref|NP_963799.1| - 0.082 12.5 1.8 0.098 12.2 1.8 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family UPF0113_N PF17833.1 gi|41615301|ref|NP_963799.1| - 0.24 12.0 2.7 3.7 8.2 0.1 2.7 3 0 0 3 3 3 0 UPF0113 Pre-PUA domain RNA_pol_Rpb5_C PF01191.19 gi|41615301|ref|NP_963799.1| - 0.96 9.4 4.6 11 5.9 0.3 2.5 2 1 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain DUF348 PF03990.14 gi|41615302|ref|NP_963800.1| - 0.0063 16.2 0.5 0.01 15.5 0.5 1.7 1 1 0 1 1 1 1 G5-linked-Ubiquitin-like domain Ribosomal_S4e PF00900.20 gi|41615302|ref|NP_963800.1| - 0.019 14.8 0.1 0.03 14.2 0.0 1.4 1 1 0 1 1 1 0 Ribosomal family S4e Proteasome PF00227.26 gi|41615303|ref|NP_963801.1| - 1.2e-49 168.4 0.1 1.6e-49 168.0 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|41615303|ref|NP_963801.1| - 4.8e-11 42.1 0.1 8.8e-11 41.3 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature ATP_bind_3 PF01171.20 gi|41615304|ref|NP_963802.1| - 3.9e-15 56.1 0.0 2.3e-14 53.6 0.0 2.0 1 1 0 1 1 1 1 PP-loop family zn-ribbon_14 PF16503.5 gi|41615304|ref|NP_963802.1| - 7.4e-05 22.2 1.6 7.4e-05 22.2 1.6 2.1 2 0 0 2 2 2 1 Zinc-ribbon PAPS_reduct PF01507.19 gi|41615304|ref|NP_963802.1| - 0.00031 20.8 0.4 0.004 17.2 0.0 2.3 2 1 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family RecR PF02132.15 gi|41615304|ref|NP_963802.1| - 0.011 15.3 2.1 0.011 15.3 2.1 2.4 3 0 0 3 3 3 0 RecR protein Baculo_LEF-2 PF03041.14 gi|41615304|ref|NP_963802.1| - 2 8.0 7.4 1.3 8.7 0.9 2.3 2 0 0 2 2 2 0 lef-2 YyzF PF14116.6 gi|41615304|ref|NP_963802.1| - 6.8 6.8 7.3 0.77 9.8 0.3 2.9 3 0 0 3 3 3 0 YyzF-like protein UPF0020 PF01170.18 gi|41615305|ref|NP_963803.1| - 1.4e-38 132.6 0.0 2e-38 132.0 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|41615305|ref|NP_963803.1| - 2.4e-13 50.4 1.3 4.6e-13 49.5 1.3 1.5 1 0 0 1 1 1 1 THUMP domain MTS PF05175.14 gi|41615305|ref|NP_963803.1| - 2.8e-06 27.0 0.0 1.4e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain N6_Mtase PF02384.16 gi|41615305|ref|NP_963803.1| - 8.3e-06 25.3 0.0 2.3e-05 23.8 0.0 1.7 1 1 0 1 1 1 1 N-6 DNA Methylase N6_N4_Mtase PF01555.18 gi|41615305|ref|NP_963803.1| - 2e-05 24.4 0.0 0.02 14.6 0.0 2.5 2 1 0 2 2 2 2 DNA methylase Eco57I PF07669.11 gi|41615305|ref|NP_963803.1| - 0.001 19.6 0.2 0.0028 18.1 0.2 1.7 1 0 0 1 1 1 1 Eco57I restriction-modification methylase AviRa PF11599.8 gi|41615305|ref|NP_963803.1| - 0.015 14.8 0.0 0.18 11.2 0.0 2.2 2 0 0 2 2 2 0 RRNA methyltransferase AviRa Cons_hypoth95 PF03602.15 gi|41615305|ref|NP_963803.1| - 0.053 13.2 0.0 6.9 6.3 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical protein 95 PAPS_reduct PF01507.19 gi|41615306|ref|NP_963804.1| - 3.2e-26 92.4 0.0 1e-25 90.8 0.0 1.8 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|41615306|ref|NP_963804.1| - 0.00082 18.9 0.0 0.0014 18.1 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|41615306|ref|NP_963804.1| - 0.0082 15.3 0.0 0.014 14.5 0.0 1.4 1 0 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|41615306|ref|NP_963804.1| - 0.13 12.0 0.0 0.31 10.8 0.0 1.7 2 0 0 2 2 2 0 PP-loop family SBDS_C PF09377.10 gi|41615307|ref|NP_963805.1| - 2.3e-21 76.0 1.0 2.3e-21 76.0 1.0 1.9 2 0 0 2 2 2 1 SBDS protein C-terminal domain SBDS PF01172.18 gi|41615307|ref|NP_963805.1| - 2.3e-18 66.1 2.3 5.1e-18 64.9 2.3 1.6 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein YL1_C PF08265.11 gi|41615307|ref|NP_963805.1| - 0.015 15.1 0.7 0.031 14.0 0.7 1.6 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain UPF0262 PF06793.12 gi|41615307|ref|NP_963805.1| - 0.068 13.3 0.3 0.16 12.1 0.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0262) DUF4490 PF14892.6 gi|41615307|ref|NP_963805.1| - 0.19 11.8 1.8 8.3 6.5 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4490) Spore_II_R PF09551.10 gi|41615307|ref|NP_963805.1| - 0.84 10.1 3.6 4.5 7.7 2.7 2.3 1 1 1 2 2 2 0 Stage II sporulation protein R (spore_II_R) ING PF12998.7 gi|41615307|ref|NP_963805.1| - 1.2 9.7 5.5 15 6.2 4.0 2.9 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding AF0941-like PF14591.6 gi|41615307|ref|NP_963805.1| - 4.6 7.8 9.4 0.44 11.1 2.0 2.5 2 1 0 2 2 2 0 AF0941-like DUF5591 PF17884.1 gi|41615308|ref|NP_963806.1| - 5.5e-20 71.8 2.1 1.3e-19 70.6 2.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) DUF87 PF01935.17 gi|41615309|ref|NP_963807.1| - 7.9e-35 121.0 0.5 7.9e-35 121.0 0.5 2.1 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_10 PF12846.7 gi|41615309|ref|NP_963807.1| - 5.4e-08 32.1 0.0 0.0084 15.1 0.0 2.5 2 0 0 2 2 2 2 AAA-like domain FtsK_SpoIIIE PF01580.18 gi|41615309|ref|NP_963807.1| - 3.4e-07 29.9 0.2 0.0044 16.4 0.0 2.2 2 0 0 2 2 2 2 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 gi|41615309|ref|NP_963807.1| - 3.5e-06 26.2 0.0 6.3e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DEAD PF00270.29 gi|41615309|ref|NP_963807.1| - 0.0013 18.6 0.0 0.52 10.1 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|41615309|ref|NP_963807.1| - 0.012 15.8 0.2 1.1 9.5 0.0 2.5 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|41615309|ref|NP_963807.1| - 0.021 15.4 0.7 0.049 14.1 0.2 2.0 2 1 0 2 2 2 0 ABC transporter DUF853 PF05872.12 gi|41615309|ref|NP_963807.1| - 0.024 13.2 0.0 0.041 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) T2SSE PF00437.20 gi|41615309|ref|NP_963807.1| - 0.061 12.4 0.0 0.11 11.5 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein SWI2_SNF2 PF18766.1 gi|41615309|ref|NP_963807.1| - 0.12 12.0 0.0 1.4 8.6 0.0 2.3 2 0 0 2 2 2 0 SWI2/SNF2 ATPase DNA_pol_B PF00136.21 gi|41615310|ref|NP_963808.1| - 1.4e-20 73.5 0.5 1.8e-20 73.1 0.5 1.1 1 0 0 1 1 1 1 DNA polymerase family B TPR_8 PF13181.6 gi|41615310|ref|NP_963808.1| - 0.11 12.8 0.1 0.74 10.2 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 gi|41615310|ref|NP_963808.1| - 0.13 12.8 0.0 0.58 10.7 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat YdjM PF04307.14 gi|41615311|ref|NP_963809.1| - 2.5e-12 46.5 6.9 1.9e-11 43.6 6.9 1.9 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase MRAP PF15183.6 gi|41615311|ref|NP_963809.1| - 1.2 9.2 7.4 7.5 6.6 2.2 2.4 2 0 0 2 2 2 0 Melanocortin-2 receptor accessory protein family DUF2227 PF09988.9 gi|41615311|ref|NP_963809.1| - 1.3 8.9 7.2 3.9 7.3 2.8 2.2 1 1 1 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) Phage_holin_1 PF04531.13 gi|41615311|ref|NP_963809.1| - 3.4 8.3 6.4 1.8 9.2 0.5 2.5 2 1 0 2 2 2 0 Bacteriophage holin MS_channel PF00924.18 gi|41615312|ref|NP_963810.1| - 1.6e-37 129.1 3.2 2.7e-37 128.3 3.2 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel Med20 PF08612.11 gi|41615312|ref|NP_963810.1| - 0.091 12.1 0.0 0.15 11.4 0.0 1.4 1 1 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex AbrB_C PF18277.1 gi|41615312|ref|NP_963810.1| - 0.11 12.2 0.3 0.9 9.2 0.0 2.8 3 0 0 3 3 3 0 AbrB C-terminal domain SNARE_assoc PF09335.11 gi|41615312|ref|NP_963810.1| - 1.7 9.2 7.4 4.3 7.8 7.4 1.7 1 0 0 1 1 1 0 SNARE associated Golgi protein Ribosomal_L32e PF01655.18 gi|41615313|ref|NP_963811.1| - 9.7e-31 106.4 0.7 1.3e-30 106.0 0.3 1.4 1 1 0 1 1 1 1 Ribosomal protein L32 PEPCK_GTP PF00821.18 gi|41615313|ref|NP_963811.1| - 0.0051 15.7 0.7 0.0071 15.2 0.7 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Tropomyosin PF00261.20 gi|41615314|ref|NP_963812.1| - 8.2e-05 22.1 11.2 0.0031 16.9 11.0 2.0 1 1 0 1 1 1 1 Tropomyosin SlyX PF04102.12 gi|41615314|ref|NP_963812.1| - 0.00014 22.4 8.1 0.024 15.3 8.1 2.6 1 1 0 1 1 1 1 SlyX XhlA PF10779.9 gi|41615314|ref|NP_963812.1| - 0.00023 21.3 13.4 0.029 14.6 1.0 2.1 2 0 0 2 2 2 2 Haemolysin XhlA DUF2730 PF10805.8 gi|41615314|ref|NP_963812.1| - 0.00038 20.5 7.4 0.0015 18.6 2.2 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF2730) Tnp_22_trimer PF17489.2 gi|41615314|ref|NP_963812.1| - 0.0016 18.4 10.1 0.043 13.8 2.4 2.7 2 1 1 3 3 2 2 L1 transposable element trimerization domain Dynamitin PF04912.14 gi|41615314|ref|NP_963812.1| - 0.0032 16.8 6.8 0.0037 16.6 6.8 1.0 1 0 0 1 1 1 1 Dynamitin DUF1664 PF07889.12 gi|41615314|ref|NP_963812.1| - 0.0047 17.0 4.1 0.012 15.6 3.7 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) FlxA PF14282.6 gi|41615314|ref|NP_963812.1| - 0.0058 16.6 7.5 0.0094 15.9 5.9 2.0 1 1 1 2 2 2 1 FlxA-like protein Fmp27_WPPW PF10359.9 gi|41615314|ref|NP_963812.1| - 0.0061 15.5 6.4 0.0063 15.4 6.4 1.0 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain FlaC_arch PF05377.11 gi|41615314|ref|NP_963812.1| - 0.017 15.5 13.5 0.46 10.9 1.7 3.0 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) ABC_tran_CTD PF16326.5 gi|41615314|ref|NP_963812.1| - 0.018 15.3 19.0 0.35 11.2 9.5 3.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain bZIP_1 PF00170.21 gi|41615314|ref|NP_963812.1| - 0.021 14.9 13.2 0.19 11.8 3.0 2.3 2 0 0 2 2 2 0 bZIP transcription factor Baculo_PEP_C PF04513.12 gi|41615314|ref|NP_963812.1| - 0.023 14.7 2.7 0.032 14.3 2.7 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus E2F_CC-MB PF16421.5 gi|41615314|ref|NP_963812.1| - 0.024 15.0 1.9 0.024 15.0 1.9 1.9 1 1 1 2 2 2 0 E2F transcription factor CC-MB domain Laminin_II PF06009.12 gi|41615314|ref|NP_963812.1| - 0.03 14.3 9.4 0.56 10.2 2.2 2.0 1 1 1 2 2 2 0 Laminin Domain II HMMR_N PF15905.5 gi|41615314|ref|NP_963812.1| - 0.031 13.7 11.0 0.048 13.1 11.0 1.3 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ADIP PF11559.8 gi|41615314|ref|NP_963812.1| - 0.035 14.2 7.8 0.49 10.5 0.8 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding dCache_1 PF02743.18 gi|41615314|ref|NP_963812.1| - 0.039 13.7 1.9 0.047 13.5 1.9 1.1 1 0 0 1 1 1 0 Cache domain Tropomyosin_1 PF12718.7 gi|41615314|ref|NP_963812.1| - 0.05 13.8 10.8 0.12 12.5 10.8 1.6 1 1 0 1 1 1 0 Tropomyosin like MetOD2 PF18548.1 gi|41615314|ref|NP_963812.1| - 0.05 13.7 12.7 1.1 9.4 1.5 3.1 1 1 2 3 3 3 0 Metanogen output domain 2 Unstab_antitox PF09720.10 gi|41615314|ref|NP_963812.1| - 0.054 13.6 1.0 0.054 13.6 1.0 2.1 2 2 0 2 2 2 0 Putative addiction module component DUF16 PF01519.16 gi|41615314|ref|NP_963812.1| - 0.064 13.8 9.2 0.11 13.0 4.4 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 Prefoldin PF02996.17 gi|41615314|ref|NP_963812.1| - 0.077 12.9 12.0 0.39 10.6 1.2 2.6 1 1 1 2 2 2 0 Prefoldin subunit Syntaxin-6_N PF09177.11 gi|41615314|ref|NP_963812.1| - 0.086 13.4 6.2 0.22 12.1 6.2 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Exonuc_VII_L PF02601.15 gi|41615314|ref|NP_963812.1| - 0.19 11.3 3.4 0.19 11.3 3.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4988 PF16378.5 gi|41615314|ref|NP_963812.1| - 0.19 11.4 8.1 0.7 9.5 1.9 2.2 1 1 1 2 2 2 0 Domain of unknown function Clr5 PF14420.6 gi|41615314|ref|NP_963812.1| - 0.25 11.6 1.6 0.65 10.3 1.6 1.8 1 1 0 1 1 1 0 Clr5 domain FPP PF05911.11 gi|41615314|ref|NP_963812.1| - 0.25 9.5 10.7 0.31 9.2 10.7 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil CENP-F_leu_zip PF10473.9 gi|41615314|ref|NP_963812.1| - 0.29 11.2 13.0 0.23 11.5 3.9 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 I_LWEQ PF01608.17 gi|41615314|ref|NP_963812.1| - 0.3 11.3 4.4 0.36 11.1 4.4 1.2 1 0 0 1 1 1 0 I/LWEQ domain P4Ha_N PF08336.11 gi|41615314|ref|NP_963812.1| - 0.34 10.9 9.2 0.97 9.5 1.6 2.1 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region BLOC1_2 PF10046.9 gi|41615314|ref|NP_963812.1| - 0.35 11.2 11.3 2.4 8.5 7.5 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Phasin PF05597.11 gi|41615314|ref|NP_963812.1| - 0.37 10.8 5.4 1.1 9.3 4.1 2.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) HlyD_2 PF12700.7 gi|41615314|ref|NP_963812.1| - 0.41 9.3 13.5 0.045 12.5 3.7 2.0 1 1 1 2 2 2 0 HlyD family secretion protein Prefoldin_2 PF01920.20 gi|41615314|ref|NP_963812.1| - 0.5 10.4 16.4 0.83 9.6 2.3 2.9 1 1 1 2 2 2 0 Prefoldin subunit FapA PF03961.13 gi|41615314|ref|NP_963812.1| - 0.52 8.9 10.8 0.6 8.6 10.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A MtrG PF04210.13 gi|41615314|ref|NP_963812.1| - 0.52 10.2 6.9 1.7 8.6 0.6 2.8 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G FAM76 PF16046.5 gi|41615314|ref|NP_963812.1| - 0.7 9.2 6.5 0.78 9.0 6.5 1.1 1 0 0 1 1 1 0 FAM76 protein DUF2721 PF11026.8 gi|41615314|ref|NP_963812.1| - 0.76 9.7 3.7 1.7 8.6 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) EMP24_GP25L PF01105.24 gi|41615314|ref|NP_963812.1| - 0.8 9.6 6.6 9.8 6.1 6.6 2.0 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Sec2p PF06428.11 gi|41615314|ref|NP_963812.1| - 0.8 9.7 11.7 0.12 12.3 2.2 2.5 1 1 0 2 2 2 0 GDP/GTP exchange factor Sec2p DUF4140 PF13600.6 gi|41615314|ref|NP_963812.1| - 0.83 10.1 8.3 9.6 6.7 1.8 2.9 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) SKA2 PF16740.5 gi|41615314|ref|NP_963812.1| - 0.85 9.4 8.3 0.99 9.2 2.2 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Vac_Fusion PF02346.16 gi|41615314|ref|NP_963812.1| - 0.97 9.1 9.7 0.79 9.4 1.2 3.0 1 1 1 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 Occludin_ELL PF07303.13 gi|41615314|ref|NP_963812.1| - 1.2 9.9 9.7 2.9 8.7 4.6 2.1 1 1 1 2 2 2 0 Occludin homology domain Noelin-1 PF12308.8 gi|41615314|ref|NP_963812.1| - 1.2 9.1 3.6 6.8 6.7 3.6 2.0 1 1 0 1 1 1 0 Neurogenesis glycoprotein OEP PF02321.18 gi|41615314|ref|NP_963812.1| - 1.3 8.8 7.2 1.4 8.7 2.4 2.4 1 1 1 2 2 2 0 Outer membrane efflux protein CCDC53 PF10152.9 gi|41615314|ref|NP_963812.1| - 1.4 9.3 10.3 2.7 8.4 1.9 2.1 1 1 1 2 2 2 0 Subunit CCDC53 of WASH complex DUF4349 PF14257.6 gi|41615314|ref|NP_963812.1| - 1.8 8.0 7.0 1.6 8.1 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) Bap31_Bap29_C PF18035.1 gi|41615314|ref|NP_963812.1| - 2.2 8.4 7.4 1.4 9.0 0.3 2.7 1 1 1 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain CENP-Q PF13094.6 gi|41615314|ref|NP_963812.1| - 2.5 8.3 8.8 12 6.0 8.8 1.8 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Paralemmin PF03285.15 gi|41615314|ref|NP_963812.1| - 2.6 7.6 7.4 6.1 6.3 7.5 1.5 1 1 0 1 1 1 0 Paralemmin Fib_alpha PF08702.10 gi|41615314|ref|NP_963812.1| - 2.9 8.1 10.9 7.7 6.7 10.9 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family PspB PF06667.12 gi|41615314|ref|NP_963812.1| - 3.4 7.8 9.3 7.8 6.6 0.6 2.4 1 1 0 2 2 2 0 Phage shock protein B GreA_GreB_N PF03449.15 gi|41615314|ref|NP_963812.1| - 3.6 7.8 16.8 1.6 9.0 0.9 3.5 1 1 1 3 3 3 0 Transcription elongation factor, N-terminal YabA PF06156.13 gi|41615314|ref|NP_963812.1| - 5 7.8 8.3 1.1e+02 3.5 8.3 2.1 1 1 0 1 1 1 0 Initiation control protein YabA DUF3287 PF11690.8 gi|41615314|ref|NP_963812.1| - 7.1 6.4 7.1 13 5.5 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) Sugarporin_N PF11471.8 gi|41615314|ref|NP_963812.1| - 7.6 6.6 11.0 12 5.9 2.2 2.6 2 1 0 2 2 2 0 Maltoporin periplasmic N-terminal extension DUF5320 PF17253.2 gi|41615314|ref|NP_963812.1| - 8.5 7.5 10.5 45 5.2 1.1 3.0 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Med4 PF10018.9 gi|41615314|ref|NP_963812.1| - 8.7 6.0 8.3 23 4.6 8.3 1.7 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 SH3_11 PF18103.1 gi|41615315|ref|NP_963813.1| - 0.098 12.9 0.2 0.15 12.3 0.2 1.3 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain Cu_amine_oxidN1 PF07833.11 gi|41615315|ref|NP_963813.1| - 0.11 13.0 0.5 0.65 10.5 0.2 1.9 1 1 1 2 2 2 0 Copper amine oxidase N-terminal domain HTH_38 PF13936.6 gi|41615316|ref|NP_963814.1| - 1e-06 28.4 0.1 2.2e-06 27.3 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|41615316|ref|NP_963814.1| - 1.4e-06 27.9 0.5 9.5e-06 25.2 0.0 2.3 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_40 PF14493.6 gi|41615316|ref|NP_963814.1| - 1.9e-06 28.2 2.1 5.7e-06 26.7 2.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|41615316|ref|NP_963814.1| - 3.9e-05 23.3 0.0 7.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.12 gi|41615316|ref|NP_963814.1| - 0.00021 21.1 0.3 0.00079 19.3 0.0 2.2 2 1 0 2 2 2 1 HTH domain HTH_24 PF13412.6 gi|41615316|ref|NP_963814.1| - 0.0003 20.3 0.1 0.00083 18.9 0.0 1.8 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 gi|41615316|ref|NP_963814.1| - 0.0003 20.5 0.0 0.00069 19.3 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_20 PF12840.7 gi|41615316|ref|NP_963814.1| - 0.00032 20.7 0.0 0.0013 18.7 0.0 2.1 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|41615316|ref|NP_963814.1| - 0.0012 18.9 0.1 0.002 18.2 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain KNOX2 PF03791.13 gi|41615316|ref|NP_963814.1| - 0.0019 17.7 0.1 0.0033 16.9 0.1 1.4 1 0 0 1 1 1 1 KNOX2 domain HTH_29 PF13551.6 gi|41615316|ref|NP_963814.1| - 0.0021 18.0 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix GerE PF00196.19 gi|41615316|ref|NP_963814.1| - 0.0023 17.5 0.0 0.0041 16.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 gi|41615316|ref|NP_963814.1| - 0.0041 16.9 0.0 0.0086 15.9 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_31 PF13560.6 gi|41615316|ref|NP_963814.1| - 0.0072 16.7 0.4 0.026 14.8 0.2 2.1 1 1 1 2 2 2 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 gi|41615316|ref|NP_963814.1| - 0.0086 16.0 0.3 0.046 13.6 0.0 1.9 1 1 1 2 2 2 1 ECF sigma factor HTH_5 PF01022.20 gi|41615316|ref|NP_963814.1| - 0.0096 15.8 0.0 0.027 14.3 0.0 1.8 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 gi|41615316|ref|NP_963814.1| - 0.011 15.2 0.5 0.038 13.5 0.1 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 Terminase_5 PF06056.12 gi|41615316|ref|NP_963814.1| - 0.022 14.6 0.0 0.043 13.7 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) TMP_2 PF06791.13 gi|41615316|ref|NP_963814.1| - 0.025 14.3 1.1 0.039 13.6 1.0 1.4 1 1 0 1 1 1 0 Prophage tail length tape measure protein HTH_22 PF13309.6 gi|41615316|ref|NP_963814.1| - 0.027 14.5 0.0 0.14 12.2 0.0 2.3 2 0 0 2 2 2 0 HTH domain HTH_17 PF12728.7 gi|41615316|ref|NP_963814.1| - 0.031 14.4 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|41615316|ref|NP_963814.1| - 0.042 13.9 0.0 0.1 12.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_19 PF12844.7 gi|41615316|ref|NP_963814.1| - 0.042 13.9 0.4 0.094 12.8 0.4 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain DnaB_bind PF10410.9 gi|41615316|ref|NP_963814.1| - 0.053 13.7 0.6 16 5.8 0.0 3.0 3 0 0 3 3 3 0 DnaB-helicase binding domain of primase HTH_10 PF04967.12 gi|41615316|ref|NP_963814.1| - 0.066 13.0 0.6 0.26 11.1 0.1 2.3 3 0 0 3 3 3 0 HTH DNA binding domain ABC_transp_aux PF09822.9 gi|41615316|ref|NP_963814.1| - 0.067 12.7 0.6 0.086 12.3 0.1 1.5 2 0 0 2 2 2 0 ABC-type uncharacterized transport system HTH_15 PF12324.8 gi|41615316|ref|NP_963814.1| - 0.11 12.5 0.3 25 4.9 0.0 2.8 1 1 2 3 3 3 0 Helix-turn-helix domain of alkylmercury lyase MarR_2 PF12802.7 gi|41615316|ref|NP_963814.1| - 0.11 12.4 0.1 0.23 11.4 0.1 1.5 1 1 0 1 1 1 0 MarR family Sigma70_r3 PF04539.16 gi|41615316|ref|NP_963814.1| - 0.18 11.9 2.6 2.2 8.4 0.1 2.3 1 1 1 2 2 2 0 Sigma-70 region 3 HisKA_3 PF07730.13 gi|41615316|ref|NP_963814.1| - 0.31 11.6 1.9 6.2 7.4 1.9 2.6 1 1 0 1 1 1 0 Histidine kinase Prefoldin_2 PF01920.20 gi|41615316|ref|NP_963814.1| - 3.3 7.7 8.9 25 4.9 0.7 2.1 1 1 1 2 2 2 0 Prefoldin subunit tRNA-synt_2 PF00152.20 gi|41615317|ref|NP_963815.1| - 9e-82 274.6 1.2 1.1e-81 274.3 1.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|41615317|ref|NP_963815.1| - 4e-11 42.7 0.2 1.2e-10 41.3 0.1 1.9 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|41615317|ref|NP_963815.1| - 0.0093 15.5 1.3 0.77 9.2 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) Exog_C PF18026.1 gi|41615317|ref|NP_963815.1| - 0.02 14.9 0.0 0.062 13.4 0.0 1.8 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain Methyltr_RsmB-F PF01189.17 gi|41615318|ref|NP_963816.1| - 1.6e-51 174.8 0.0 2e-51 174.5 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|41615318|ref|NP_963816.1| - 7.5e-15 55.2 1.3 2.1e-11 44.1 0.4 3.3 2 1 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|41615318|ref|NP_963816.1| - 1.8e-06 27.8 0.0 2.9e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|41615318|ref|NP_963816.1| - 2.3e-05 25.0 0.0 0.00016 22.3 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|41615318|ref|NP_963816.1| - 0.00064 19.9 0.0 0.00077 19.6 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRM PF02005.16 gi|41615318|ref|NP_963816.1| - 0.013 14.7 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|41615318|ref|NP_963816.1| - 0.046 13.3 0.0 0.077 12.6 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.6 gi|41615318|ref|NP_963816.1| - 0.065 13.1 0.0 0.51 10.2 0.0 2.2 2 1 0 2 2 2 0 Methyltransferase domain RrnaAD PF00398.20 gi|41615318|ref|NP_963816.1| - 0.068 12.2 0.0 0.11 11.5 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DRE2_N PF16803.5 gi|41615318|ref|NP_963816.1| - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus MTS PF05175.14 gi|41615318|ref|NP_963816.1| - 0.13 11.9 0.2 2.9 7.4 0.2 2.1 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|41615318|ref|NP_963816.1| - 0.16 12.6 0.0 0.92 10.2 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Hist_deacetyl PF00850.19 gi|41615319|ref|NP_963817.1| - 5.9e-49 167.2 0.1 7.6e-49 166.8 0.1 1.1 1 0 0 1 1 1 1 Histone deacetylase domain PCNA_N PF00705.18 gi|41615320|ref|NP_963818.1| - 2.8e-12 46.5 0.1 4.5e-11 42.6 0.0 2.4 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|41615320|ref|NP_963818.1| - 4.1e-12 46.4 1.0 2.4e-11 43.9 0.1 2.3 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|41615320|ref|NP_963818.1| - 0.0015 18.0 0.1 0.0019 17.7 0.1 1.2 1 0 0 1 1 1 1 Rad9 PDZ_4 PF17816.1 gi|41615320|ref|NP_963818.1| - 0.12 12.8 0.7 0.62 10.5 0.0 2.3 2 1 0 2 2 2 0 PDZ domain SepF PF04472.12 gi|41615320|ref|NP_963818.1| - 0.17 12.2 2.5 11 6.4 0.1 3.6 3 1 0 3 3 3 0 Cell division protein SepF TM_helix PF05552.12 gi|41615321|ref|NP_963819.1| - 0.00098 19.0 4.8 0.00098 19.0 4.8 3.8 4 0 0 4 4 4 1 Conserved TM helix EI24 PF07264.11 gi|41615321|ref|NP_963819.1| - 0.0056 16.9 7.4 0.0056 16.9 7.4 1.9 1 1 0 2 2 2 1 Etoposide-induced protein 2.4 (EI24) CD34_antigen PF06365.12 gi|41615321|ref|NP_963819.1| - 0.11 12.1 0.0 0.24 10.9 0.0 1.6 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF1761 PF08570.10 gi|41615321|ref|NP_963819.1| - 0.69 10.2 11.7 1.4 9.2 8.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1761) SP_C-Propep PF08999.10 gi|41615321|ref|NP_963819.1| - 0.92 9.3 4.4 0.34 10.7 0.3 2.2 3 0 0 3 3 3 0 Surfactant protein C, N terminal propeptide Acyl_transf_3 PF01757.22 gi|41615321|ref|NP_963819.1| - 6.6 5.7 18.3 14 4.6 18.4 1.5 1 1 0 1 1 1 0 Acyltransferase family Spt5-NGN PF03439.13 gi|41615322|ref|NP_963820.1| - 3.5e-19 68.5 0.5 3.5e-19 68.5 0.5 1.8 2 0 0 2 2 2 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|41615322|ref|NP_963820.1| - 3.1e-06 26.9 1.5 5.7e-06 26.1 0.8 1.8 2 0 0 2 2 2 1 KOW motif NusG PF02357.19 gi|41615322|ref|NP_963820.1| - 0.003 18.0 0.1 0.0076 16.7 0.1 1.7 1 0 0 1 1 1 1 Transcription termination factor nusG DUF4925 PF16272.5 gi|41615322|ref|NP_963820.1| - 0.015 14.8 0.4 0.028 13.9 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4925) DUF3195 PF11424.8 gi|41615322|ref|NP_963820.1| - 0.019 15.0 0.1 0.035 14.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3195) Imm48 PF15574.6 gi|41615322|ref|NP_963820.1| - 0.041 13.7 0.1 0.068 12.9 0.1 1.3 1 0 0 1 1 1 0 Immunity protein 48 TrmB PF01978.19 gi|41615323|ref|NP_963821.1| - 2.1e-10 40.3 0.3 3.4e-10 39.7 0.2 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|41615323|ref|NP_963821.1| - 8.6e-08 31.6 0.6 8.6e-08 31.6 0.6 2.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 gi|41615323|ref|NP_963821.1| - 5e-06 26.9 0.3 6.6e-06 26.5 0.3 1.2 1 0 0 1 1 1 1 Penicillinase repressor HTH_5 PF01022.20 gi|41615323|ref|NP_963821.1| - 2.3e-05 24.1 0.9 5.8e-05 22.9 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|41615323|ref|NP_963821.1| - 4.6e-05 23.2 0.0 7e-05 22.6 0.0 1.4 1 1 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|41615323|ref|NP_963821.1| - 0.00031 21.2 0.2 0.0006 20.2 0.1 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|41615323|ref|NP_963821.1| - 0.00036 20.4 0.6 0.00036 20.4 0.6 2.2 2 1 0 2 2 2 1 HTH domain HTH_micro PF17007.5 gi|41615323|ref|NP_963821.1| - 0.00045 19.2 5.4 0.00053 18.9 5.4 1.1 1 0 0 1 1 1 1 HTH-like MarR PF01047.22 gi|41615323|ref|NP_963821.1| - 0.0025 17.7 0.1 0.0051 16.7 0.1 1.6 1 0 0 1 1 1 1 MarR family PCI PF01399.27 gi|41615323|ref|NP_963821.1| - 0.0026 18.2 1.4 0.0026 18.2 1.4 1.7 2 1 0 2 2 1 1 PCI domain HTH_36 PF13730.6 gi|41615323|ref|NP_963821.1| - 0.0031 17.4 1.1 0.0043 17.0 0.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain Mga PF05043.13 gi|41615323|ref|NP_963821.1| - 0.0032 18.0 1.1 0.0032 18.0 1.1 1.8 1 1 1 2 2 2 1 Mga helix-turn-helix domain Fe_dep_repress PF01325.19 gi|41615323|ref|NP_963821.1| - 0.0033 17.6 1.5 0.005 17.0 0.1 2.0 2 1 1 3 3 3 1 Iron dependent repressor, N-terminal DNA binding domain DDRGK PF09756.9 gi|41615323|ref|NP_963821.1| - 0.0041 16.7 3.3 0.0052 16.4 3.3 1.3 1 1 0 1 1 1 1 DDRGK domain HTH_DeoR PF08220.12 gi|41615323|ref|NP_963821.1| - 0.0043 16.8 1.7 0.0052 16.5 0.1 1.9 3 0 0 3 3 2 1 DeoR-like helix-turn-helix domain HTH_9 PF08221.11 gi|41615323|ref|NP_963821.1| - 0.0044 17.1 0.1 0.0078 16.3 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Dimerisation2 PF16864.5 gi|41615323|ref|NP_963821.1| - 0.0063 16.5 0.0 0.011 15.7 0.0 1.4 1 1 0 1 1 1 1 Dimerisation domain SpoIIID PF12116.8 gi|41615323|ref|NP_963821.1| - 0.009 16.1 0.9 0.018 15.1 0.5 1.6 1 1 1 2 2 2 1 Stage III sporulation protein D DUF2250 PF10007.9 gi|41615323|ref|NP_963821.1| - 0.01 15.9 1.2 0.017 15.2 0.5 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) TFIIE_alpha PF02002.17 gi|41615323|ref|NP_963821.1| - 0.012 15.5 7.1 0.02 14.7 6.8 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_20 PF12840.7 gi|41615323|ref|NP_963821.1| - 0.021 14.8 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain P22_AR_N PF10547.9 gi|41615323|ref|NP_963821.1| - 0.041 14.2 0.2 0.057 13.8 0.2 1.3 1 1 0 1 1 1 0 P22_AR N-terminal domain NuiA PF07924.11 gi|41615323|ref|NP_963821.1| - 0.044 14.2 0.7 0.054 13.9 0.7 1.1 1 0 0 1 1 1 0 Nuclease A inhibitor-like protein EAP30 PF04157.16 gi|41615323|ref|NP_963821.1| - 0.045 13.0 0.2 0.13 11.5 0.0 1.7 2 0 0 2 2 2 0 EAP30/Vps36 family B-block_TFIIIC PF04182.12 gi|41615323|ref|NP_963821.1| - 0.067 13.4 1.6 0.21 11.8 1.6 1.9 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_10 PF04967.12 gi|41615323|ref|NP_963821.1| - 0.069 13.0 0.1 0.069 13.0 0.1 2.0 3 0 0 3 3 3 0 HTH DNA binding domain HTH_IclR PF09339.10 gi|41615323|ref|NP_963821.1| - 0.087 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF4423 PF14394.6 gi|41615323|ref|NP_963821.1| - 0.15 11.8 3.2 0.14 11.9 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) GTP_EFTU PF00009.27 gi|41615324|ref|NP_963822.1| - 1e-59 201.3 0.0 2.1e-59 200.4 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 gi|41615324|ref|NP_963822.1| - 3.4e-24 84.7 0.0 7.8e-24 83.5 0.0 1.7 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 gi|41615324|ref|NP_963822.1| - 1.2e-23 82.9 0.1 3.2e-23 81.6 0.1 1.8 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 gi|41615324|ref|NP_963822.1| - 4.6e-18 65.2 0.1 1.5e-17 63.5 0.1 1.9 1 0 0 1 1 1 1 Elongation factor G, domain IV GTP_EFTU_D2 PF03144.25 gi|41615324|ref|NP_963822.1| - 2.7e-13 50.1 0.4 7.7e-13 48.6 0.4 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 gi|41615324|ref|NP_963822.1| - 0.00015 21.6 0.0 0.00029 20.7 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 gi|41615324|ref|NP_963822.1| - 0.0016 18.5 0.0 0.0053 16.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase RuvA_C PF07499.13 gi|41615324|ref|NP_963822.1| - 0.0067 16.9 0.0 0.79 10.2 0.0 3.1 3 0 0 3 3 3 1 RuvA, C-terminal domain UBA PF00627.31 gi|41615324|ref|NP_963822.1| - 0.032 14.1 0.0 0.07 13.1 0.0 1.6 1 0 0 1 1 1 0 UBA/TS-N domain DUF4347 PF14252.6 gi|41615324|ref|NP_963822.1| - 0.05 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) DUF3361 PF11841.8 gi|41615324|ref|NP_963822.1| - 0.096 12.6 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3361) TP6A_N PF04406.14 gi|41615325|ref|NP_963823.1| - 4.7e-19 68.1 0.2 8.1e-19 67.4 0.2 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2399 PF09664.10 gi|41615325|ref|NP_963823.1| - 5.4e-05 23.2 0.0 0.00013 21.9 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function C-terminus (DUF2399) DUF2220 PF09983.9 gi|41615325|ref|NP_963823.1| - 0.067 12.6 0.1 0.2 11.0 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) FmrO PF07091.11 gi|41615326|ref|NP_963824.1| - 1.9e-07 30.9 0.0 2.6e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Peptidase_M50 PF02163.22 gi|41615327|ref|NP_963825.1| - 1.5e-14 53.9 1.4 1.6e-12 47.3 1.4 2.9 1 1 0 1 1 1 1 Peptidase family M50 Ribosomal_L1 PF00687.21 gi|41615328|ref|NP_963826.1| - 1.1e-37 129.7 0.3 1.3e-37 129.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family tRNA_bind_2 PF13725.6 gi|41615328|ref|NP_963826.1| - 0.058 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Possible tRNA binding domain Ribosomal_S24e PF01282.19 gi|41615329|ref|NP_963827.1| - 6.2e-21 74.1 0.5 7.7e-21 73.8 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e NmrA PF05368.13 gi|41615329|ref|NP_963827.1| - 0.017 14.7 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family HTH_19 PF12844.7 gi|41615329|ref|NP_963827.1| - 0.036 14.1 0.3 0.32 11.0 0.1 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain tRNA-synt_2c PF01411.19 gi|41615330|ref|NP_963828.1| - 1.3e-39 136.2 0.1 1.5e-38 132.6 0.1 2.0 1 1 0 1 1 1 1 tRNA synthetases class II (A) Cas_Cas4 PF01930.17 gi|41615331|ref|NP_963829.1| - 8.2e-19 68.3 1.7 8.4e-15 55.2 0.7 2.1 2 0 0 2 2 2 2 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|41615331|ref|NP_963829.1| - 7e-18 65.5 0.5 9.5e-18 65.0 0.5 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Csa1 PF06023.12 gi|41615331|ref|NP_963829.1| - 1.2e-11 44.5 0.3 9e-11 41.7 0.3 2.0 1 1 0 1 1 1 1 CRISPR-associated exonuclease Csa1 Dna2 PF08696.11 gi|41615331|ref|NP_963829.1| - 0.18 11.6 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 DNA replication factor Dna2 CBM-like PF14683.6 gi|41615332|ref|NP_963830.1| - 0.00028 20.8 0.3 0.0003 20.7 0.3 1.1 1 0 0 1 1 1 1 Polysaccharide lyase family 4, domain III Tox-REase-7 PF15649.6 gi|41615332|ref|NP_963830.1| - 0.1 12.9 0.5 0.47 10.8 0.3 2.0 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 7 YbaB_DNA_bd PF02575.16 gi|41615332|ref|NP_963830.1| - 0.19 12.0 0.4 1.2 9.4 0.1 2.0 1 1 1 2 2 2 0 YbaB/EbfC DNA-binding family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Nanoarchaeota/Nanoarchaeum_equitans_Kin4_M_uid58009/NC_005213.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Nanoarchaeota/Nanoarchaeum_equitans_Kin4_M_uid58009/NC_005213.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Nanoarchaeota/Nanoarchaeum_equitans_Kin4_M_uid58009/NC_005213.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Nanoarchaeota/Nanoarchaeum_equitans_Kin4_M_uid58009/NC_005213.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:05:40 2019 # [ok]