# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ATP-synt_C PF00137.21 gi|16082468|ref|NP_393478.1| - 3e-08 33.9 10.7 3.9e-08 33.5 10.7 1.1 1 0 0 1 1 1 1 ATP synthase subunit C PHO4 PF01384.20 gi|16082468|ref|NP_393478.1| - 1.2 8.1 4.7 1.2 8.1 4.7 1.0 1 0 0 1 1 1 0 Phosphate transporter family vATP-synt_E PF01991.18 gi|16081187|ref|NP_393479.1| - 0.00012 21.6 18.0 0.0027 17.1 16.4 2.0 1 1 1 2 2 2 2 ATP synthase (E/31 kDa) subunit V-ATPase_G_2 PF16999.5 gi|16081187|ref|NP_393479.1| - 0.0005 20.5 13.2 0.00052 20.4 11.1 1.8 1 1 1 2 2 2 1 Vacuolar (H+)-ATPase G subunit DUF4709 PF15821.5 gi|16081187|ref|NP_393479.1| - 0.0016 18.7 0.9 0.0016 18.7 0.9 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4709) YbjQ_1 PF01906.17 gi|16081187|ref|NP_393479.1| - 0.12 13.1 0.6 0.22 12.2 0.1 1.7 1 1 1 2 2 2 0 Putative heavy-metal-binding HIP1_clath_bdg PF16515.5 gi|16081187|ref|NP_393479.1| - 1.1 9.9 9.5 0.98 10.1 7.5 1.8 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 OmpH PF03938.14 gi|16081187|ref|NP_393479.1| - 3.6 7.9 17.4 8.1 6.8 17.4 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) vATP-synt_AC39 PF01992.16 gi|16081188|ref|NP_393480.1| - 3.6e-49 168.1 1.9 4.6e-49 167.7 1.9 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit ATP-synt_F PF01990.17 gi|16081189|ref|NP_393481.1| - 2.4e-15 56.6 0.4 2.9e-15 56.3 0.4 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit TIR_3 PF18567.1 gi|16081189|ref|NP_393481.1| - 0.009 16.0 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Toll/interleukin-1 receptor domain ATP-synt_ab PF00006.25 gi|16081190|ref|NP_393482.1| - 5.9e-88 294.1 0.0 7.8e-80 267.5 0.0 2.8 3 0 0 3 3 3 2 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|16081190|ref|NP_393482.1| - 1.9e-43 147.2 1.1 7.9e-43 145.2 0.1 2.3 2 0 0 2 2 2 1 ATPsynthase alpha/beta subunit N-term extension Intein_splicing PF14890.6 gi|16081190|ref|NP_393482.1| - 2.7e-18 66.2 0.2 6.7e-18 64.9 0.2 1.7 1 0 0 1 1 1 1 Intein splicing domain ATP-synt_ab_N PF02874.23 gi|16081190|ref|NP_393482.1| - 6.3e-12 45.8 2.4 6.3e-12 45.8 2.4 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain Hint PF01079.20 gi|16081190|ref|NP_393482.1| - 0.033 13.7 0.2 0.074 12.5 0.2 1.6 1 0 0 1 1 1 0 Hint module Myosin_N PF02736.19 gi|16081190|ref|NP_393482.1| - 0.85 9.5 4.7 5.1 7.0 0.2 3.3 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain Peptidase_M23 PF01551.22 gi|16081190|ref|NP_393482.1| - 6.6 7.0 5.7 16 5.8 0.0 3.8 5 0 0 5 5 5 0 Peptidase family M23 ATP-synt_ab PF00006.25 gi|16081191|ref|NP_393483.1| - 9.3e-67 224.8 0.0 1.3e-66 224.3 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|16081191|ref|NP_393483.1| - 9.2e-12 45.3 0.4 9.2e-12 45.3 0.4 1.7 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|16081191|ref|NP_393483.1| - 0.066 13.4 0.1 0.14 12.3 0.1 1.6 1 0 0 1 1 1 0 HAS barrel domain ATP-synt_D PF01813.17 gi|16081192|ref|NP_393484.1| - 7e-46 156.5 11.1 7.9e-46 156.4 11.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF655 PF04919.12 gi|16081192|ref|NP_393484.1| - 0.23 11.4 4.4 6.2 6.7 4.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF655) Pro_dh PF01619.18 gi|16082633|ref|NP_393485.1| - 0.024 14.2 8.7 0.029 13.9 8.7 1.1 1 0 0 1 1 1 0 Proline dehydrogenase Nucleolin_bd PF16725.5 gi|16082633|ref|NP_393485.1| - 0.026 14.2 1.5 0.065 12.9 1.5 1.7 1 1 0 1 1 1 0 Nucleolin binding domain V-ATPase_G_2 PF16999.5 gi|16082633|ref|NP_393485.1| - 0.059 13.8 14.6 0.079 13.4 14.6 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit UPF0184 PF03670.13 gi|16082633|ref|NP_393485.1| - 0.059 13.8 3.5 0.1 13.0 3.5 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) DUF5324 PF17258.2 gi|16082633|ref|NP_393485.1| - 0.098 12.3 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5324) V-ATPase_G PF03179.15 gi|16082633|ref|NP_393485.1| - 0.11 13.1 18.8 0.4 11.2 18.0 2.0 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF883 PF05957.13 gi|16082633|ref|NP_393485.1| - 0.2 12.3 7.9 0.98 10.1 6.5 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) ATP-synt_B PF00430.18 gi|16082633|ref|NP_393485.1| - 0.23 11.5 18.9 0.083 13.0 7.6 2.1 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) DivIVA PF05103.13 gi|16082633|ref|NP_393485.1| - 0.38 10.9 16.7 1.7 8.7 16.7 1.8 1 1 0 1 1 1 0 DivIVA protein TMEM215 PF15746.5 gi|16082633|ref|NP_393485.1| - 0.83 9.1 3.6 0.9 8.9 3.6 1.1 1 0 0 1 1 1 0 TMEM215 family HSP70 PF00012.20 gi|16082633|ref|NP_393485.1| - 3 5.9 14.0 3.1 5.9 14.0 1.0 1 0 0 1 1 1 0 Hsp70 protein AAA_11 PF13086.6 gi|16082633|ref|NP_393485.1| - 6.9 6.4 10.1 7.8 6.2 10.1 1.1 1 0 0 1 1 1 0 AAA domain YtxH PF12732.7 gi|16082633|ref|NP_393485.1| - 8 7.1 12.5 2.2e+02 2.4 12.4 2.2 1 1 0 1 1 1 0 YtxH-like protein TMPIT PF07851.13 gi|16082633|ref|NP_393485.1| - 10 5.3 9.4 12 5.1 9.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein V_ATPase_I PF01496.19 gi|16081193|ref|NP_393486.1| - 4.4e-33 114.2 1.1 2e-24 85.6 0.0 2.3 2 0 0 2 2 2 2 V-type ATPase 116kDa subunit family Baculo_PEP_C PF04513.12 gi|16081193|ref|NP_393486.1| - 0.088 12.9 0.5 0.23 11.5 0.1 1.9 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus SNO PF01174.19 gi|16081194|ref|NP_393487.1| - 2.1e-58 197.3 0.0 2.3e-58 197.1 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|16081194|ref|NP_393487.1| - 5.1e-11 42.5 0.1 8.2e-11 41.9 0.1 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|16081194|ref|NP_393487.1| - 4.1e-06 26.6 0.0 5.8e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|16081194|ref|NP_393487.1| - 0.0044 16.8 0.0 0.0064 16.3 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|16081194|ref|NP_393487.1| - 0.011 15.6 0.0 0.43 10.3 0.0 2.1 1 1 0 1 1 1 0 Glutamine amidotransferase class-I GCV_T PF01571.21 gi|16082469|ref|NP_393488.1| - 6e-88 294.5 0.0 7.1e-88 294.3 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|16082469|ref|NP_393488.1| - 1.1e-17 63.7 0.1 2.3e-17 62.7 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Epimerase PF01370.21 gi|16081195|ref|NP_393489.1| - 1.2e-43 149.3 0.0 1.5e-43 149.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|16081195|ref|NP_393489.1| - 2.7e-42 145.3 0.2 6.4e-42 144.1 0.2 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|16081195|ref|NP_393489.1| - 6.3e-15 54.9 0.1 1e-14 54.2 0.1 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|16081195|ref|NP_393489.1| - 4.2e-14 52.3 0.0 6.4e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|16081195|ref|NP_393489.1| - 6.7e-14 51.7 1.3 4.4e-12 45.7 1.3 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|16081195|ref|NP_393489.1| - 6.2e-12 45.2 0.1 4.8e-07 29.2 0.0 2.6 2 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|16081195|ref|NP_393489.1| - 0.0015 18.4 0.0 0.0052 16.7 0.0 1.9 1 1 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|16081195|ref|NP_393489.1| - 0.018 14.5 1.1 1 8.8 0.0 2.8 2 1 0 2 2 2 0 short chain dehydrogenase Yqai PF09466.10 gi|16081195|ref|NP_393489.1| - 0.045 14.1 0.1 0.15 12.4 0.1 1.8 1 0 0 1 1 1 0 Hypothetical protein Yqai KR PF08659.10 gi|16081195|ref|NP_393489.1| - 0.16 11.8 0.0 4 7.3 0.0 2.2 2 0 0 2 2 2 0 KR domain FYVE PF01363.21 gi|16081196|ref|NP_393490.1| - 0.0087 16.2 1.3 0.011 15.8 1.3 1.4 1 1 0 1 1 1 1 FYVE zinc finger zinc-ribbons_6 PF07191.12 gi|16081196|ref|NP_393490.1| - 0.0093 15.9 0.1 0.012 15.5 0.1 1.2 1 0 0 1 1 1 1 zinc-ribbons zf-BED PF02892.15 gi|16081196|ref|NP_393490.1| - 0.52 10.4 3.0 0.93 9.6 3.0 1.6 1 1 0 1 1 1 0 BED zinc finger Sod_Fe_C PF02777.18 gi|16081197|ref|NP_393491.1| - 5.9e-25 87.4 0.2 9.6e-25 86.7 0.2 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|16081197|ref|NP_393491.1| - 4.5e-09 36.7 0.0 1e-08 35.5 0.0 1.6 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain YpM PF09144.10 gi|16082470|ref|NP_393492.1| - 0.14 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen HhH-GPD PF00730.25 gi|16082470|ref|NP_393492.1| - 0.19 12.2 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein EamA PF00892.20 gi|16081198|ref|NP_393493.1| - 7.8e-30 103.8 35.1 1.7e-20 73.6 16.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|16081198|ref|NP_393493.1| - 9.8e-05 21.8 19.9 0.0036 16.7 13.4 2.1 1 1 1 2 2 2 2 Triose-phosphate Transporter family DUF4231 PF14015.6 gi|16081198|ref|NP_393493.1| - 0.89 10.1 6.0 0.59 10.6 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) Methyltransf_11 PF08241.12 gi|16081199|ref|NP_393494.1| - 6.8e-11 42.7 0.0 1.2e-10 41.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16081199|ref|NP_393494.1| - 1.9e-06 28.5 0.0 3.4e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16081199|ref|NP_393494.1| - 0.0003 20.7 0.0 0.00048 20.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081199|ref|NP_393494.1| - 0.0068 17.1 0.0 0.021 15.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|16081199|ref|NP_393494.1| - 0.0082 15.5 0.0 0.023 14.0 0.0 1.7 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Bap31 PF05529.12 gi|16081199|ref|NP_393494.1| - 0.15 12.0 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region PHO4 PF01384.20 gi|16081200|ref|NP_393495.1| - 3.8e-29 101.8 28.1 2.5e-27 95.8 28.1 2.1 1 1 0 1 1 1 1 Phosphate transporter family PhoU_div PF01865.16 gi|16081201|ref|NP_393496.1| - 1.2e-11 44.4 6.7 1.8e-11 43.8 6.7 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF47 CorA PF01544.18 gi|16081201|ref|NP_393496.1| - 1.9 7.7 5.7 0.84 8.9 0.9 2.4 2 1 1 3 3 3 0 CorA-like Mg2+ transporter protein GAT PF03127.14 gi|16081201|ref|NP_393496.1| - 3 8.2 6.7 4.2 7.7 0.4 2.5 2 1 0 2 2 2 0 GAT domain MarC PF01914.17 gi|16081202|ref|NP_393497.1| - 3.4e-55 186.6 13.3 4e-55 186.4 13.3 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein LigT_PEase PF02834.16 gi|16081203|ref|NP_393498.1| - 1.8e-25 88.9 0.0 8.1e-15 54.8 0.0 2.4 2 1 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|16081203|ref|NP_393498.1| - 1.8e-06 27.9 0.0 2.5e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily LRIF1 PF15741.5 gi|16082634|ref|NP_393499.1| - 0.093 11.3 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Aminotran_1_2 PF00155.21 gi|16082471|ref|NP_393500.1| - 9e-22 77.7 0.0 1.3e-21 77.1 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II tRNA_deacylase PF04414.12 gi|16081204|ref|NP_393501.1| - 1.1e-60 204.7 0.0 1.3e-60 204.4 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Ribo_biogen_C PF04034.13 gi|16082472|ref|NP_393502.1| - 4.1e-41 139.7 0.0 4.8e-41 139.4 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|16082472|ref|NP_393502.1| - 2.4e-05 24.1 0.0 4.5e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI PAPS_reduct PF01507.19 gi|16081205|ref|NP_393503.1| - 0.012 15.7 0.1 0.031 14.3 0.0 1.7 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family ERAP1_C PF11838.8 gi|16081205|ref|NP_393503.1| - 0.12 11.9 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 ERAP1-like C-terminal domain DUF2238 PF09997.9 gi|16081205|ref|NP_393503.1| - 0.13 12.1 1.3 1.5 8.6 0.2 2.2 2 0 0 2 2 2 0 Predicted membrane protein (DUF2238) DUF1611 PF07755.11 gi|16081206|ref|NP_393504.1| - 3.8e-67 225.5 0.0 5.3e-67 225.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_C) P-loop domain DUF1611_N PF17396.2 gi|16081206|ref|NP_393504.1| - 8.2e-32 109.3 0.0 1.6e-31 108.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1611_N) Rossmann-like domain CbiA PF01656.23 gi|16081206|ref|NP_393504.1| - 0.022 14.8 0.0 0.25 11.4 0.0 2.6 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PALP PF00291.25 gi|16081207|ref|NP_393505.1| - 2.5e-54 184.7 0.0 2.8e-54 184.6 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme FlpD PF02662.16 gi|16081207|ref|NP_393505.1| - 0.13 12.3 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit Aldo_ket_red PF00248.21 gi|16081208|ref|NP_393506.1| - 6.2e-74 248.8 0.0 5.9e-73 245.6 0.0 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family 2-oxogl_dehyd_N PF16078.5 gi|16081209|ref|NP_393507.1| - 0.046 13.3 0.1 0.12 12.0 0.1 1.8 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus OrfB_IS605 PF01385.19 gi|16081210|ref|NP_393508.1| - 1.3e-15 57.7 0.1 2.3e-15 56.9 0.1 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|16081210|ref|NP_393508.1| - 2e-08 34.0 0.0 3.9e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Glyco_hydro_97 PF10566.9 gi|16081210|ref|NP_393508.1| - 0.0029 16.9 0.1 0.0037 16.6 0.1 1.1 1 0 0 1 1 1 1 Glycoside hydrolase 97 RuvX PF03652.15 gi|16081210|ref|NP_393508.1| - 0.0072 16.7 0.1 0.53 10.7 0.0 2.3 1 1 0 2 2 2 1 Holliday junction resolvase RuvC_1 PF18516.1 gi|16081210|ref|NP_393508.1| - 0.011 15.0 2.5 0.018 14.3 2.5 1.5 1 1 0 1 1 1 0 RuvC nuclease domain Thiolase_N PF00108.23 gi|16081211|ref|NP_393509.1| - 3.4e-25 88.9 0.0 5.2e-25 88.3 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 gi|16081211|ref|NP_393509.1| - 4e-07 29.9 3.4 9.7e-07 28.6 1.9 2.2 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_C PF02803.18 gi|16081211|ref|NP_393509.1| - 2.3e-06 27.3 0.7 8.2e-06 25.5 0.0 2.2 3 0 0 3 3 3 1 Thiolase, C-terminal domain ACP_syn_III PF08545.10 gi|16081211|ref|NP_393509.1| - 0.037 13.9 0.5 0.3 11.0 0.1 2.3 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SspH PF08141.12 gi|16081211|ref|NP_393509.1| - 0.13 12.4 0.0 0.3 11.2 0.0 1.6 1 0 0 1 1 1 0 Small acid-soluble spore protein H family DUF35_N PF12172.8 gi|16081212|ref|NP_393510.1| - 2.5e-11 43.2 1.5 3.5e-11 42.8 1.5 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|16081212|ref|NP_393510.1| - 0.003 17.5 0.0 0.0047 16.9 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DZR PF12773.7 gi|16081212|ref|NP_393510.1| - 0.04 13.9 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Double zinc ribbon Ribosomal_L37e PF01907.19 gi|16081212|ref|NP_393510.1| - 0.15 12.2 0.2 0.24 11.6 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein L37e Ribosomal_L5_C PF00673.21 gi|16081212|ref|NP_393510.1| - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 ribosomal L5P family C-terminus FdhE PF04216.12 gi|16081212|ref|NP_393510.1| - 0.17 11.8 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-ribbon_3 PF13248.6 gi|16081212|ref|NP_393510.1| - 0.25 10.8 3.8 0.52 9.8 3.8 1.6 1 1 0 1 1 1 0 zinc-ribbon domain DUF5510 PF17629.2 gi|16081213|ref|NP_393511.1| - 0.041 13.8 0.3 0.096 12.6 0.3 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5510) OLF PF02191.16 gi|16081213|ref|NP_393511.1| - 0.092 12.3 0.0 0.18 11.3 0.0 1.5 1 1 1 2 2 2 0 Olfactomedin-like domain HTH_11 PF08279.12 gi|16081214|ref|NP_393512.1| - 0.00062 19.7 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 HTH domain UPF0122 PF04297.14 gi|16081214|ref|NP_393512.1| - 0.0018 18.5 0.0 0.0038 17.4 0.0 1.5 1 0 0 1 1 1 1 Putative helix-turn-helix protein, YlxM / p13 like HTH_23 PF13384.6 gi|16081214|ref|NP_393512.1| - 0.0054 16.5 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain GntR PF00392.21 gi|16081214|ref|NP_393512.1| - 0.01 15.5 0.0 0.021 14.5 0.0 1.5 1 1 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_28 PF13518.6 gi|16081214|ref|NP_393512.1| - 0.017 15.2 0.0 0.034 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain ACT_4 PF13291.6 gi|16081214|ref|NP_393512.1| - 0.017 15.7 0.7 7.4 7.2 0.1 3.4 2 2 1 3 3 3 0 ACT domain HTH_29 PF13551.6 gi|16081214|ref|NP_393512.1| - 0.021 14.8 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_36 PF13730.6 gi|16081214|ref|NP_393512.1| - 0.042 13.8 0.0 0.087 12.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_22 PF13309.6 gi|16081214|ref|NP_393512.1| - 0.055 13.5 0.0 0.24 11.5 0.0 2.0 2 0 0 2 2 2 0 HTH domain HTH_7 PF02796.15 gi|16081214|ref|NP_393512.1| - 0.057 13.5 0.1 0.2 11.7 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase ABC_ATPase PF09818.9 gi|16081214|ref|NP_393512.1| - 0.11 11.3 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class TrmB PF01978.19 gi|16081214|ref|NP_393512.1| - 0.13 12.2 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rubrerythrin PF02915.17 gi|16081215|ref|NP_393513.1| - 4.3e-05 23.9 1.8 5.3e-05 23.6 1.8 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|16081215|ref|NP_393513.1| - 0.013 15.8 0.3 0.023 15.0 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF2383) COQ7 PF03232.13 gi|16081215|ref|NP_393513.1| - 0.025 14.4 0.4 0.029 14.2 0.4 1.2 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 DUF4525 PF15027.6 gi|16081215|ref|NP_393513.1| - 0.11 12.2 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) DUF1326 PF07040.11 gi|16081215|ref|NP_393513.1| - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1326) Hemerythrin PF01814.23 gi|16081216|ref|NP_393514.1| - 3.4e-12 47.1 0.4 4.6e-12 46.7 0.4 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain SPECT1 PF18680.1 gi|16081216|ref|NP_393514.1| - 0.023 14.4 0.4 0.033 13.9 0.3 1.3 1 1 0 1 1 1 0 Plasmodium host cell traversal SPECT1 BCDHK_Adom3 PF10436.9 gi|16081216|ref|NP_393514.1| - 0.072 12.9 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase PCI PF01399.27 gi|16081216|ref|NP_393514.1| - 0.12 12.8 0.1 0.2 12.2 0.1 1.7 1 1 0 1 1 1 0 PCI domain DUF1841 PF08897.11 gi|16081216|ref|NP_393514.1| - 0.13 12.3 0.1 1.6 8.8 0.0 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1841) PolC_DP2 PF03833.13 gi|16082473|ref|NP_393515.1| - 0 1110.4 0.0 0 1106.0 0.0 2.5 2 1 0 2 2 2 1 DNA polymerase II large subunit DP2 HypA PF01155.19 gi|16082473|ref|NP_393515.1| - 0.0068 16.4 6.8 0.12 12.4 0.3 2.5 2 0 0 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3340 PF11818.8 gi|16082473|ref|NP_393515.1| - 0.049 13.8 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) Rubredoxin_2 PF18073.1 gi|16082473|ref|NP_393515.1| - 0.052 13.3 16.4 0.26 11.1 4.4 2.6 2 1 0 2 2 2 0 Rubredoxin metal binding domain Zn-ribbon_8 PF09723.10 gi|16082473|ref|NP_393515.1| - 0.081 13.1 14.3 1.2 9.3 0.9 2.7 2 0 0 2 2 2 0 Zinc ribbon domain zinc-ribbons_6 PF07191.12 gi|16082473|ref|NP_393515.1| - 0.28 11.2 3.4 2.3 8.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbons zf-UBR PF02207.20 gi|16082473|ref|NP_393515.1| - 0.85 9.8 6.0 2.5 8.4 0.8 2.3 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) DZR PF12773.7 gi|16082473|ref|NP_393515.1| - 3.1 7.9 9.5 3.9 7.6 0.9 2.3 2 0 0 2 2 2 0 Double zinc ribbon ATP_bind_1 PF03029.17 gi|16081217|ref|NP_393516.1| - 3.1e-54 184.3 0.0 3.5e-54 184.1 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 gi|16081217|ref|NP_393516.1| - 0.00028 20.8 0.0 0.0047 16.8 0.0 2.2 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop GTP_EFTU PF00009.27 gi|16081217|ref|NP_393516.1| - 0.00051 19.6 0.1 0.02 14.4 0.1 2.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 gi|16081217|ref|NP_393516.1| - 0.0014 18.6 0.0 0.0089 16.0 0.0 2.2 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 gi|16081217|ref|NP_393516.1| - 0.004 17.1 0.1 2.6 7.9 0.0 2.9 3 0 0 3 3 3 1 RsgA GTPase CbiA PF01656.23 gi|16081217|ref|NP_393516.1| - 0.0063 16.6 0.0 0.014 15.4 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 gi|16081217|ref|NP_393516.1| - 0.012 15.8 0.0 0.025 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 gi|16081217|ref|NP_393516.1| - 0.019 13.9 0.1 1.2 8.0 0.0 2.2 2 0 0 2 2 2 0 PrkA AAA domain PduV-EutP PF10662.9 gi|16081217|ref|NP_393516.1| - 0.028 14.2 0.2 1.8 8.3 0.1 3.0 3 1 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.6 gi|16081217|ref|NP_393516.1| - 0.032 14.0 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|16081217|ref|NP_393516.1| - 0.037 14.1 0.0 0.051 13.7 0.0 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain RNA_helicase PF00910.22 gi|16081217|ref|NP_393516.1| - 0.042 14.2 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 RNA helicase SRP54 PF00448.22 gi|16081217|ref|NP_393516.1| - 0.054 13.1 0.0 0.15 11.7 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 gi|16081217|ref|NP_393516.1| - 0.083 13.1 0.0 0.19 11.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|16081217|ref|NP_393516.1| - 0.087 12.4 0.4 2.4 7.7 0.1 2.5 2 1 1 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|16081217|ref|NP_393516.1| - 0.088 13.4 0.0 0.22 12.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain NOG1 PF06858.14 gi|16081217|ref|NP_393516.1| - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|16081217|ref|NP_393516.1| - 0.12 12.5 0.1 1.5 8.9 0.1 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|16081217|ref|NP_393516.1| - 0.13 11.9 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16081217|ref|NP_393516.1| - 0.25 11.7 0.0 0.5 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain TPR_2 PF07719.17 gi|16081218|ref|NP_393517.1| - 6.1e-37 122.8 0.7 1.6e-08 34.0 0.2 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|16081218|ref|NP_393517.1| - 2.1e-35 119.1 4.2 3.3e-10 39.3 0.4 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|16081218|ref|NP_393517.1| - 9.3e-35 115.9 8.9 1.9e-07 30.7 0.4 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|16081218|ref|NP_393517.1| - 5e-33 112.5 12.7 2.8e-10 39.7 0.0 6.0 3 3 3 6 6 6 5 TPR repeat TPR_19 PF14559.6 gi|16081218|ref|NP_393517.1| - 4.7e-19 68.7 12.6 6.8e-07 29.7 0.2 3.8 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|16081218|ref|NP_393517.1| - 2.6e-18 65.0 1.7 1e-05 25.6 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|16081218|ref|NP_393517.1| - 1.2e-17 64.3 0.0 6.5e-06 26.7 0.0 3.3 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|16081218|ref|NP_393517.1| - 1.8e-17 63.4 0.3 3.2e-06 27.3 0.0 4.2 2 2 1 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16081218|ref|NP_393517.1| - 5.5e-16 57.9 0.1 0.047 14.5 0.0 5.5 1 1 5 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|16081218|ref|NP_393517.1| - 6e-15 55.2 0.1 9.5e-05 22.5 0.0 3.8 2 1 1 3 3 3 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|16081218|ref|NP_393517.1| - 8.5e-14 51.6 0.5 0.00086 19.5 0.4 3.2 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|16081218|ref|NP_393517.1| - 1.2e-12 47.3 1.9 0.00071 19.4 0.0 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|16081218|ref|NP_393517.1| - 1.2e-12 46.9 0.7 0.055 13.5 0.1 5.4 6 0 0 6 6 5 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|16081218|ref|NP_393517.1| - 9.5e-12 44.6 5.7 1.6e-05 24.0 0.1 2.7 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 gi|16081218|ref|NP_393517.1| - 8.7e-11 41.7 2.3 0.19 12.5 0.2 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|16081218|ref|NP_393517.1| - 9e-08 31.7 0.1 0.0068 15.6 0.0 2.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_20 PF14561.6 gi|16081218|ref|NP_393517.1| - 5.3e-07 29.9 1.5 0.069 13.5 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_21 PF09976.9 gi|16081218|ref|NP_393517.1| - 2.4e-05 24.2 4.7 0.13 12.0 0.1 3.0 2 1 1 3 3 3 2 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|16081218|ref|NP_393517.1| - 0.00055 20.3 0.0 20 6.2 0.0 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat RPN7 PF10602.9 gi|16081218|ref|NP_393517.1| - 0.00062 19.5 2.0 0.77 9.4 0.0 3.6 1 1 1 3 3 3 1 26S proteasome subunit RPN7 SRP_TPR_like PF17004.5 gi|16081218|ref|NP_393517.1| - 0.0015 18.6 5.3 0.27 11.3 0.5 2.3 1 1 0 2 2 2 2 Putative TPR-like repeat TPR_MalT PF17874.1 gi|16081218|ref|NP_393517.1| - 0.002 17.6 0.0 0.025 13.9 0.0 2.4 2 1 1 3 3 3 1 MalT-like TPR region BTAD PF03704.17 gi|16081218|ref|NP_393517.1| - 0.0023 18.3 0.2 0.22 12.0 0.1 2.7 1 1 1 3 3 3 2 Bacterial transcriptional activator domain PPR PF01535.20 gi|16081218|ref|NP_393517.1| - 0.0041 17.3 4.8 13 6.3 0.0 5.1 5 0 0 5 5 5 0 PPR repeat SHNi-TPR PF10516.9 gi|16081218|ref|NP_393517.1| - 0.0046 16.4 1.2 0.32 10.5 0.0 3.5 4 0 0 4 4 4 1 SHNi-TPR Fis1_TPR_C PF14853.6 gi|16081218|ref|NP_393517.1| - 0.0054 16.8 9.3 0.28 11.3 0.0 4.0 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|16081218|ref|NP_393517.1| - 0.026 14.6 1.4 1.4 8.9 0.4 3.7 1 1 2 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_3 PF07720.12 gi|16081218|ref|NP_393517.1| - 0.043 13.8 4.2 0.85 9.7 0.2 3.4 3 1 0 3 3 2 0 Tetratricopeptide repeat DUF1730 PF08331.10 gi|16081218|ref|NP_393517.1| - 0.089 12.7 0.3 0.21 11.5 0.1 1.7 2 0 0 2 2 1 0 Domain of unknown function (DUF1730) SNAP PF14938.6 gi|16081218|ref|NP_393517.1| - 0.13 11.7 3.3 0.47 9.8 1.2 2.3 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP ThiD2 PF17792.1 gi|16081218|ref|NP_393517.1| - 0.19 12.2 0.8 29 5.1 0.2 2.9 1 1 1 2 2 2 0 ThiD2 family DUF357 PF04010.13 gi|16081218|ref|NP_393517.1| - 0.2 11.8 4.7 0.26 11.4 0.3 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF357) SPOB_a PF14689.6 gi|16081218|ref|NP_393517.1| - 0.57 9.9 3.5 11 5.8 0.1 3.6 4 0 0 4 4 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain MobB PF03205.14 gi|16081219|ref|NP_393518.1| - 2.9e-20 72.5 0.0 3.7e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|16081219|ref|NP_393518.1| - 0.0014 18.6 0.0 0.0016 18.4 0.0 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_26 PF13500.6 gi|16081219|ref|NP_393518.1| - 0.0054 16.6 0.0 0.02 14.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|16081219|ref|NP_393518.1| - 0.013 15.1 0.0 0.017 14.7 0.0 1.4 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|16081219|ref|NP_393518.1| - 0.033 14.3 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|16081219|ref|NP_393518.1| - 0.076 13.4 0.0 0.086 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Dynamin_N PF00350.23 gi|16081219|ref|NP_393518.1| - 0.085 12.9 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Dynamin family DUF3970 PF13113.6 gi|16081219|ref|NP_393518.1| - 0.095 12.9 0.1 1.9 8.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) PRK PF00485.18 gi|16081219|ref|NP_393518.1| - 0.12 12.1 0.0 0.39 10.4 0.0 1.7 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family Pox_A32 PF04665.12 gi|16081219|ref|NP_393518.1| - 0.13 11.7 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_14 PF13173.6 gi|16081219|ref|NP_393518.1| - 0.13 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|16081219|ref|NP_393518.1| - 0.16 12.1 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain tRNA-synt_1 PF00133.22 gi|16081220|ref|NP_393519.1| - 5.5e-118 394.8 0.1 8e-117 391.0 0.1 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|16081220|ref|NP_393519.1| - 6.8e-34 117.0 0.3 1.1e-33 116.3 0.3 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|16081220|ref|NP_393519.1| - 2.5e-23 82.5 4.4 1.3e-12 47.2 0.0 3.6 4 0 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|16081220|ref|NP_393519.1| - 1e-08 34.9 0.0 0.00046 19.6 0.0 2.7 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|16081220|ref|NP_393519.1| - 7.6e-08 32.1 0.1 1.4e-06 27.9 0.0 3.0 3 1 1 4 4 4 1 Leucyl-tRNA synthetase, Domain 2 zf-ACC PF17848.1 gi|16081220|ref|NP_393519.1| - 0.026 14.6 6.0 5.7 7.1 0.1 3.5 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 gi|16081220|ref|NP_393519.1| - 0.028 14.4 0.9 1.8 8.7 0.3 2.6 2 0 0 2 2 2 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 gi|16081220|ref|NP_393519.1| - 0.14 12.1 3.6 13 5.7 0.1 3.6 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS Zn-ribbon_8 PF09723.10 gi|16081220|ref|NP_393519.1| - 0.55 10.4 2.5 6 7.1 0.2 2.7 3 0 0 3 3 2 0 Zinc ribbon domain ADK_lid PF05191.14 gi|16081220|ref|NP_393519.1| - 0.8 9.7 3.2 1 9.4 1.0 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid HypA PF01155.19 gi|16081220|ref|NP_393519.1| - 1.2 9.2 3.1 4.3 7.4 0.1 2.6 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|16081220|ref|NP_393519.1| - 2 8.1 8.3 39 4.0 0.3 4.0 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger PIN_6 PF17146.4 gi|16081221|ref|NP_393520.1| - 2.1e-17 63.4 0.0 3.3e-17 62.7 0.0 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|16081221|ref|NP_393520.1| - 8.9e-06 25.3 0.1 0.00017 21.1 0.1 2.1 1 1 1 2 2 2 1 PINc domain ribonuclease DUF4411 PF14367.6 gi|16081221|ref|NP_393520.1| - 0.00096 19.1 0.1 0.0046 16.9 0.1 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4411) DUF5615 PF18480.1 gi|16081221|ref|NP_393520.1| - 0.013 15.2 0.1 0.022 14.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) NOB1_Zn_bind PF08772.11 gi|16081221|ref|NP_393520.1| - 0.028 14.6 0.9 0.052 13.7 0.9 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like PIN PF01850.21 gi|16081221|ref|NP_393520.1| - 0.055 14.0 1.8 0.32 11.5 1.2 2.3 2 1 0 2 2 2 0 PIN domain PIN_2 PF10130.9 gi|16081221|ref|NP_393520.1| - 0.1 12.8 0.6 0.29 11.4 0.2 1.8 1 1 1 2 2 2 0 PIN domain zf-C2H2 PF00096.26 gi|16081221|ref|NP_393520.1| - 0.28 11.7 5.1 1.5 9.4 0.7 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 gi|16081221|ref|NP_393520.1| - 0.91 9.6 4.0 1.2 9.3 0.3 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 gi|16081221|ref|NP_393520.1| - 0.94 9.6 3.7 3.5 7.8 3.7 1.9 1 1 0 1 1 1 0 Zinc ribbon domain DUF99 PF01949.16 gi|16081222|ref|NP_393521.1| - 1.9e-47 161.0 0.4 2.4e-47 160.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 CTP_synth_N PF06418.14 gi|16082474|ref|NP_393523.1| - 1.8e-120 401.2 3.3 2.4e-120 400.8 3.3 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|16082474|ref|NP_393523.1| - 9.7e-52 175.5 0.0 1.9e-51 174.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|16082474|ref|NP_393523.1| - 5.8e-08 32.8 0.0 3.6e-06 26.9 0.0 2.6 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|16082474|ref|NP_393523.1| - 0.0016 18.5 0.0 0.0032 17.5 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|16082474|ref|NP_393523.1| - 0.027 13.4 0.3 0.027 13.4 0.3 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DJ-1_PfpI PF01965.24 gi|16082474|ref|NP_393523.1| - 0.033 14.0 0.3 0.19 11.5 0.1 2.3 2 0 0 2 2 2 0 DJ-1/PfpI family GATase_3 PF07685.14 gi|16082474|ref|NP_393523.1| - 0.11 12.0 0.1 0.33 10.5 0.0 1.8 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain NTPase_1 PF03266.15 gi|16082474|ref|NP_393523.1| - 0.44 10.4 3.5 14 5.5 0.4 2.8 2 1 1 3 3 3 0 NTPase Molybdopterin PF00384.22 gi|16082475|ref|NP_393524.1| - 2.9e-93 313.2 0.0 3.4e-93 312.9 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|16082475|ref|NP_393524.1| - 7.8e-31 106.4 0.0 1.3e-30 105.6 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|16082475|ref|NP_393524.1| - 4.9e-13 48.8 1.5 8.9e-13 48.0 1.5 1.4 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Cys_rich_CPXG PF14255.6 gi|16082475|ref|NP_393524.1| - 0.12 12.3 1.3 0.23 11.4 1.3 1.4 1 0 0 1 1 1 0 Cysteine-rich CPXCG MRF_C1 PF13887.6 gi|16082475|ref|NP_393524.1| - 0.2 10.9 0.1 0.67 9.2 0.0 1.9 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 Fer4_22 PF17179.4 gi|16081223|ref|NP_393525.1| - 3.5e-26 91.9 9.4 3.5e-26 91.9 9.4 2.7 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|16081223|ref|NP_393525.1| - 4.1e-11 43.2 15.8 5.4e-08 33.2 8.2 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|16081223|ref|NP_393525.1| - 1.5e-06 28.4 2.7 0.0013 18.9 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081223|ref|NP_393525.1| - 3.2e-06 27.2 13.4 0.0024 18.0 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081223|ref|NP_393525.1| - 9.9e-06 25.6 14.3 0.0016 18.5 0.3 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16081223|ref|NP_393525.1| - 8.7e-05 22.6 19.1 0.00023 21.3 15.3 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16081223|ref|NP_393525.1| - 0.00016 21.3 22.8 0.0018 18.0 3.9 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|16081223|ref|NP_393525.1| - 0.00022 21.7 13.1 0.00022 21.7 13.1 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16081223|ref|NP_393525.1| - 0.0004 20.9 18.4 0.0034 17.9 15.9 3.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16081223|ref|NP_393525.1| - 0.04 14.0 20.8 0.091 12.9 2.4 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|16081223|ref|NP_393525.1| - 0.045 13.9 4.1 0.045 13.9 4.1 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|16081223|ref|NP_393525.1| - 0.18 11.5 0.2 0.18 11.5 0.2 2.7 3 0 0 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.6 gi|16081223|ref|NP_393525.1| - 1.2 10.1 24.0 0.23 12.4 2.6 3.5 2 2 2 4 4 4 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|16081223|ref|NP_393525.1| - 5 8.3 27.5 1.3 10.1 3.5 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|16081223|ref|NP_393525.1| - 7.2 7.4 28.0 0.09 13.3 2.7 3.1 4 0 0 4 4 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|16081223|ref|NP_393525.1| - 9.2 7.1 11.1 3.5 8.4 0.8 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain NAD_binding_1 PF00175.21 gi|16081224|ref|NP_393526.1| - 1.4e-10 41.7 0.0 2.4e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.9 gi|16081224|ref|NP_393526.1| - 3e-08 33.3 2.5 6.1e-08 32.3 2.5 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_6 PF08030.12 gi|16081224|ref|NP_393526.1| - 0.16 12.1 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Sugar_tr PF00083.24 gi|16081225|ref|NP_393527.1| - 5.9e-49 167.1 32.9 7.4e-49 166.8 32.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081225|ref|NP_393527.1| - 8.3e-34 117.1 56.9 2.3e-27 95.8 44.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|16081225|ref|NP_393527.1| - 2.7e-05 23.7 9.0 2.7e-05 23.7 9.0 2.9 3 0 0 3 3 3 1 Uncharacterised MFS-type transporter YbfB Bax1-I PF01027.20 gi|16081226|ref|NP_393528.1| - 0.026 14.3 16.9 0.078 12.8 5.0 2.5 2 1 0 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 PRA1 PF03208.19 gi|16081226|ref|NP_393528.1| - 1.4 8.5 10.7 0.49 10.0 6.1 2.4 1 1 2 3 3 3 0 PRA1 family protein MNHE PF01899.16 gi|16081226|ref|NP_393528.1| - 2.5 7.9 8.9 0.83 9.4 3.3 2.1 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit Ribosomal_S19e PF01090.19 gi|16081227|ref|NP_393529.1| - 7.5e-48 161.7 0.1 8.5e-48 161.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|16081227|ref|NP_393529.1| - 0.0026 17.6 0.0 0.011 15.6 0.0 1.9 2 0 0 2 2 2 1 RuvB C-terminal winged helix domain dsDNA_bind PF01984.20 gi|16081229|ref|NP_393531.1| - 2.7e-27 95.2 19.6 3.1e-27 95.0 19.6 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF1682 PF07946.14 gi|16081229|ref|NP_393531.1| - 2.3 7.3 12.2 3.5 6.7 12.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Agouti PF05039.12 gi|16081229|ref|NP_393531.1| - 8.5 7.2 7.7 15 6.4 6.3 2.1 1 1 1 2 2 2 0 Agouti protein Ribosomal_L39 PF00832.20 gi|16081230|ref|NP_393532.1| - 2.7e-20 71.7 12.5 3.3e-20 71.4 12.5 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein REV PF00424.18 gi|16081230|ref|NP_393532.1| - 0.33 11.0 4.0 0.34 11.0 4.0 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Ribosomal_L31e PF01198.19 gi|16081231|ref|NP_393533.1| - 8.7e-10 38.7 1.1 1e-09 38.5 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.18 gi|16082476|ref|NP_393534.1| - 1.8e-63 213.5 2.7 2.5e-63 213.1 2.7 1.2 1 0 0 1 1 1 1 eIF-6 family Pribosyltran PF00156.27 gi|16081232|ref|NP_393535.1| - 2.6e-08 33.5 0.7 6.6e-08 32.2 0.7 1.6 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|16081232|ref|NP_393535.1| - 0.031 13.7 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|16081232|ref|NP_393535.1| - 0.099 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase HBB PF06777.11 gi|16082477|ref|NP_393536.1| - 2.9e-58 196.7 0.0 6.2e-58 195.6 0.0 1.6 1 0 0 1 1 1 1 Helical and beta-bridge domain DEAD_2 PF06733.15 gi|16082477|ref|NP_393536.1| - 3.2e-47 160.4 0.0 5.5e-47 159.7 0.0 1.4 1 0 0 1 1 1 1 DEAD_2 Helicase_C_2 PF13307.6 gi|16082477|ref|NP_393536.1| - 6e-32 111.2 0.1 1.6e-31 109.8 0.0 1.8 2 0 0 2 2 2 1 Helicase C-terminal domain ResIII PF04851.15 gi|16082477|ref|NP_393536.1| - 1.2e-12 48.2 0.3 1.6e-11 44.5 0.1 2.7 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|16082477|ref|NP_393536.1| - 9.2e-08 32.0 0.0 2.4e-05 24.2 0.0 3.1 3 0 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|16082477|ref|NP_393536.1| - 3.9e-05 23.2 0.1 0.00047 19.7 0.1 2.4 1 1 0 1 1 1 1 PhoH-like protein SNF2_N PF00176.23 gi|16082477|ref|NP_393536.1| - 0.056 12.2 0.0 0.15 10.8 0.0 1.9 1 1 0 1 1 1 0 SNF2 family N-terminal domain AAA_22 PF13401.6 gi|16082477|ref|NP_393536.1| - 0.072 13.4 0.1 13 6.1 0.0 2.6 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 gi|16082477|ref|NP_393536.1| - 0.13 11.5 0.1 2.5 7.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Acetyltransf_1 PF00583.25 gi|16081233|ref|NP_393537.1| - 2.9e-18 66.2 0.0 3.6e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16081233|ref|NP_393537.1| - 1.9e-14 53.7 0.0 2.5e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16081233|ref|NP_393537.1| - 1.1e-12 48.2 0.0 1.7e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16081233|ref|NP_393537.1| - 2.7e-06 27.6 0.0 3.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|16081233|ref|NP_393537.1| - 6.7e-06 26.8 0.0 1e-05 26.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081233|ref|NP_393537.1| - 2.8e-05 24.0 0.0 4.6e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 gi|16081233|ref|NP_393537.1| - 0.00011 22.4 0.1 0.00018 21.7 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|16081233|ref|NP_393537.1| - 0.00024 20.8 0.1 0.00042 20.0 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|16081233|ref|NP_393537.1| - 0.0019 18.3 0.0 0.072 13.2 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|16081233|ref|NP_393537.1| - 0.014 15.6 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase AdoMet_Synthase PF01941.19 gi|16081234|ref|NP_393538.1| - 4.6e-171 569.0 9.0 5.1e-171 568.8 9.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) DUF2875 PF11394.8 gi|16081234|ref|NP_393538.1| - 0.071 12.0 0.2 0.1 11.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2875) S-AdoMet_synt_N PF00438.20 gi|16081234|ref|NP_393538.1| - 0.38 11.4 3.6 1.5 9.6 0.0 3.3 3 2 1 4 4 4 0 S-adenosylmethionine synthetase, N-terminal domain AICARFT_IMPCHas PF01808.18 gi|16081235|ref|NP_393539.1| - 6.6e-97 324.5 0.1 8.2e-97 324.2 0.1 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|16081235|ref|NP_393539.1| - 1.5e-10 41.1 0.0 3e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 MGS-like domain DUF4367 PF14285.6 gi|16081235|ref|NP_393539.1| - 0.015 15.8 0.0 0.029 14.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4367) BING4CT PF08149.11 gi|16081235|ref|NP_393539.1| - 0.11 12.3 0.0 0.33 10.8 0.0 1.7 1 0 0 1 1 1 0 BING4CT (NUC141) domain ECH_1 PF00378.20 gi|16081236|ref|NP_393540.1| - 9.5e-51 172.5 0.0 1.1e-50 172.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|16081236|ref|NP_393540.1| - 1.2e-30 107.2 0.0 1.4e-30 107.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase SPP PF06550.11 gi|16081237|ref|NP_393541.1| - 9.2e-124 412.5 31.9 1e-123 412.3 31.9 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|16081237|ref|NP_393541.1| - 1.6e-06 27.9 20.4 9.1e-06 25.4 20.4 2.1 1 1 0 1 1 1 1 Signal peptide peptidase Topoisom_bac PF01131.20 gi|16081238|ref|NP_393542.1| - 1.1e-114 383.7 0.0 1.4e-114 383.4 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|16081238|ref|NP_393542.1| - 9.3e-15 54.7 0.2 7.9e-14 51.7 0.2 2.5 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|16081238|ref|NP_393542.1| - 1.5e-12 47.0 0.8 1.5e-12 47.0 0.8 4.1 4 1 0 4 4 4 2 Topoisomerase DNA binding C4 zinc finger zf-FPG_IleRS PF06827.14 gi|16081238|ref|NP_393542.1| - 9.7e-05 22.1 2.4 0.0091 15.8 0.5 2.5 2 0 0 2 2 2 2 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 gi|16081238|ref|NP_393542.1| - 0.00032 20.8 2.2 0.6 10.3 0.1 2.5 2 0 0 2 2 2 2 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_4 PF13662.6 gi|16081238|ref|NP_393542.1| - 0.025 15.0 0.3 0.069 13.6 0.3 1.7 1 0 0 1 1 1 0 Toprim domain zf-ribbon_3 PF13248.6 gi|16081238|ref|NP_393542.1| - 0.031 13.7 5.0 0.64 9.5 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16081238|ref|NP_393542.1| - 0.043 13.9 2.2 0.34 11.0 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain DUF2283 PF10049.9 gi|16081238|ref|NP_393542.1| - 0.12 12.7 0.1 0.45 10.8 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2283) Lar_restr_allev PF14354.6 gi|16081238|ref|NP_393542.1| - 0.17 12.3 13.5 6.6 7.2 0.9 3.5 3 0 0 3 3 3 0 Restriction alleviation protein Lar Rad50_zn_hook PF04423.14 gi|16081238|ref|NP_393542.1| - 0.18 11.7 0.5 15 5.5 0.1 3.2 2 0 0 2 2 2 0 Rad50 zinc hook motif OrfB_Zn_ribbon PF07282.11 gi|16081238|ref|NP_393542.1| - 0.43 10.5 2.0 7.7 6.5 0.1 2.6 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|16081238|ref|NP_393542.1| - 1.6 8.6 6.3 2.4 8.0 0.4 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Acylphosphatase PF00708.18 gi|16082478|ref|NP_393543.1| - 1.4e-20 73.5 0.0 1.5e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase 12TM_1 PF09847.9 gi|16082479|ref|NP_393544.1| - 4.2e-157 523.8 70.6 4.8e-157 523.7 70.6 1.0 1 0 0 1 1 1 1 Membrane protein of 12 TMs ABC_tran PF00005.27 gi|16081239|ref|NP_393545.1| - 1.5e-25 90.3 0.0 3.4e-25 89.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|16081239|ref|NP_393545.1| - 5.9e-10 39.4 1.3 4.2e-05 23.5 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|16081239|ref|NP_393545.1| - 0.00012 22.7 0.2 0.00025 21.6 0.2 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|16081239|ref|NP_393545.1| - 0.0028 17.4 0.2 0.0068 16.1 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Polysacc_deac_2 PF04748.13 gi|16081239|ref|NP_393545.1| - 0.0035 16.5 0.0 0.0069 15.6 0.0 1.4 1 1 0 1 1 1 1 Divergent polysaccharide deacetylase SMC_N PF02463.19 gi|16081239|ref|NP_393545.1| - 0.0041 16.6 0.1 0.066 12.6 0.1 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|16081239|ref|NP_393545.1| - 0.0047 16.9 0.0 0.014 15.3 0.0 1.8 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|16081239|ref|NP_393545.1| - 0.0059 17.0 0.0 0.014 15.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|16081239|ref|NP_393545.1| - 0.012 15.4 0.1 0.033 13.9 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|16081239|ref|NP_393545.1| - 0.012 16.0 0.1 0.066 13.5 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|16081239|ref|NP_393545.1| - 0.014 15.4 0.0 0.092 12.7 0.1 2.0 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|16081239|ref|NP_393545.1| - 0.018 15.3 0.3 0.13 12.6 0.3 2.2 1 1 0 1 1 1 0 AAA domain RecA PF00154.21 gi|16081239|ref|NP_393545.1| - 0.034 13.6 0.0 0.06 12.8 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein cobW PF02492.19 gi|16081239|ref|NP_393545.1| - 0.035 13.7 0.1 0.062 12.9 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 gi|16081239|ref|NP_393545.1| - 0.037 13.9 0.2 0.089 12.7 0.2 1.6 1 0 0 1 1 1 0 NACHT domain DUF87 PF01935.17 gi|16081239|ref|NP_393545.1| - 0.055 13.5 0.5 0.17 11.9 0.5 1.9 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_15 PF13175.6 gi|16081239|ref|NP_393545.1| - 0.056 13.2 0.0 0.092 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|16081239|ref|NP_393545.1| - 0.06 13.2 0.2 0.88 9.5 0.1 2.1 2 0 0 2 2 2 0 NTPase AAA_13 PF13166.6 gi|16081239|ref|NP_393545.1| - 0.067 11.8 0.1 0.1 11.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|16081239|ref|NP_393545.1| - 0.077 10.5 0.1 0.1 10.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA PF00004.29 gi|16081239|ref|NP_393545.1| - 0.095 13.1 0.2 0.34 11.3 0.0 2.1 2 1 1 3 3 3 0 ATPase family associated with various cellular activities (AAA) PriA_3primeBD PF17764.1 gi|16081239|ref|NP_393545.1| - 0.14 12.1 0.0 1.9 8.4 0.0 2.4 3 0 0 3 3 2 0 3′ DNA-binding domain (3′BD) SRP54 PF00448.22 gi|16081239|ref|NP_393545.1| - 0.17 11.5 0.0 0.33 10.5 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 gi|16081239|ref|NP_393545.1| - 0.2 11.8 0.0 0.31 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|16081239|ref|NP_393545.1| - 0.23 10.6 0.1 0.37 9.9 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain VIT1 PF01988.19 gi|16081240|ref|NP_393546.1| - 8.4e-21 74.8 21.7 3.5e-12 46.7 1.7 2.3 1 1 1 2 2 2 2 VIT family Rubrerythrin PF02915.17 gi|16081240|ref|NP_393546.1| - 1.8e-06 28.4 0.7 5.7e-06 26.8 0.5 1.9 1 1 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 gi|16081240|ref|NP_393546.1| - 0.0016 18.6 0.1 1.2 9.4 0.0 2.3 1 1 1 2 2 2 2 Ferritin-like domain COQ7 PF03232.13 gi|16081240|ref|NP_393546.1| - 0.11 12.2 0.7 0.77 9.5 0.1 2.4 3 0 0 3 3 3 0 Ubiquinone biosynthesis protein COQ7 Dexa_ind PF15198.6 gi|16081240|ref|NP_393546.1| - 0.46 10.6 5.8 0.25 11.5 2.8 2.0 1 1 1 2 2 2 0 Dexamethasone-induced Aminotran_3 PF00202.21 gi|16081241|ref|NP_393547.1| - 2.6e-116 388.7 0.0 2.9e-116 388.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|16081241|ref|NP_393547.1| - 0.032 13.4 0.0 0.051 12.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|16081241|ref|NP_393547.1| - 0.037 13.3 0.0 0.098 11.9 0.0 1.6 1 1 0 1 1 1 0 Beta-eliminating lyase Hjc PF01870.18 gi|16081242|ref|NP_393548.1| - 1.4e-32 111.5 0.1 2.2e-32 110.9 0.1 1.3 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|16081242|ref|NP_393548.1| - 0.064 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 REase_AHJR-like HTH_Tnp_IS630 PF01710.16 gi|16081244|ref|NP_393550.1| - 0.064 13.3 1.2 0.27 11.3 0.8 1.8 1 1 1 2 2 2 0 Transposase Med20 PF08612.11 gi|16081244|ref|NP_393550.1| - 0.1 11.9 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Tubulin PF00091.25 gi|16081245|ref|NP_393551.1| - 1.2e-38 133.3 0.5 2.7e-38 132.2 0.3 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|16081245|ref|NP_393551.1| - 8.7e-20 70.8 0.1 2.5e-19 69.4 0.1 1.8 1 0 0 1 1 1 1 FtsZ family, C-terminal domain Tubulin_2 PF13809.6 gi|16081245|ref|NP_393551.1| - 1.9 7.6 6.0 10 5.2 2.4 2.2 1 1 1 2 2 2 0 Tubulin like OMPdecase PF00215.24 gi|16081246|ref|NP_393552.1| - 1.9e-33 115.9 0.0 2.3e-33 115.7 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.14 gi|16081246|ref|NP_393552.1| - 0.021 14.2 0.1 0.033 13.5 0.1 1.3 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG PcrB PF01884.17 gi|16081246|ref|NP_393552.1| - 0.06 12.8 0.1 0.086 12.3 0.1 1.3 1 0 0 1 1 1 0 PcrB family KGG PF10685.9 gi|16081246|ref|NP_393552.1| - 4.9 7.6 7.4 22 5.5 3.1 2.6 2 0 0 2 2 2 0 Stress-induced bacterial acidophilic repeat motif Peptidase_S49 PF01343.18 gi|16081247|ref|NP_393553.1| - 4.4e-39 133.9 0.0 5.4e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 gi|16081247|ref|NP_393553.1| - 5.8e-05 23.1 0.2 0.00027 20.9 0.0 1.8 2 0 0 2 2 2 1 Clp protease DUF126 PF01989.16 gi|16081247|ref|NP_393553.1| - 0.036 13.8 0.0 0.072 12.9 0.0 1.5 1 0 0 1 1 1 0 Aconitase X swivel domain GATase_3 PF07685.14 gi|16081248|ref|NP_393554.1| - 1.8e-42 145.1 0.1 2.7e-42 144.6 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|16081248|ref|NP_393554.1| - 1.9e-16 60.3 0.0 4.2e-16 59.2 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|16081248|ref|NP_393554.1| - 2.1e-12 47.3 0.0 1.8e-11 44.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain MobB PF03205.14 gi|16081248|ref|NP_393554.1| - 0.00052 19.9 0.0 0.09 12.7 0.0 2.9 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|16081248|ref|NP_393554.1| - 0.028 14.1 0.0 41 3.7 0.0 3.1 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain AAA_31 PF13614.6 gi|16081248|ref|NP_393554.1| - 0.043 13.7 0.0 6 6.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain GATase PF00117.28 gi|16081248|ref|NP_393554.1| - 0.064 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase class-I PRK PF00485.18 gi|16081248|ref|NP_393554.1| - 0.082 12.6 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|16081248|ref|NP_393554.1| - 0.087 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase Cecropin PF00272.19 gi|16081248|ref|NP_393554.1| - 0.11 12.3 1.2 0.52 10.1 0.2 2.5 2 0 0 2 2 2 0 Cecropin family CobD_Cbib PF03186.13 gi|16081249|ref|NP_393555.1| - 3.8e-80 269.1 0.1 4.7e-80 268.7 0.1 1.1 1 0 0 1 1 1 1 CobD/Cbib protein AA_permease_2 PF13520.6 gi|16081250|ref|NP_393556.1| - 0.00012 21.1 53.9 0.0013 17.7 53.9 2.3 1 1 0 1 1 1 1 Amino acid permease Pterin_bind PF00809.22 gi|16081252|ref|NP_393558.1| - 1.1e-60 205.3 0.0 1.4e-60 205.0 0.0 1.1 1 0 0 1 1 1 1 Pterin binding enzyme Cys_Met_Meta_PP PF01053.20 gi|16081253|ref|NP_393559.1| - 3.4e-124 414.3 0.0 3.8e-124 414.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Met_gamma_lyase PF06838.11 gi|16081253|ref|NP_393559.1| - 0.00025 19.7 0.1 0.095 11.2 0.0 2.1 1 1 1 2 2 2 2 Methionine gamma-lyase DegT_DnrJ_EryC1 PF01041.17 gi|16081253|ref|NP_393559.1| - 0.015 14.6 0.0 0.036 13.4 0.0 1.5 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family Thymidylate_kin PF02223.17 gi|16081254|ref|NP_393560.1| - 4.4e-27 95.0 1.5 6.2e-26 91.2 1.5 2.1 1 1 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|16081254|ref|NP_393560.1| - 1.2e-07 31.8 0.7 3.4e-07 30.3 0.7 1.7 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|16081254|ref|NP_393560.1| - 3.4e-07 30.9 0.3 7.7e-07 29.7 0.3 1.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|16081254|ref|NP_393560.1| - 7.2e-05 23.1 0.2 0.00012 22.4 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|16081254|ref|NP_393560.1| - 0.00017 21.8 0.3 0.0012 19.0 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|16081254|ref|NP_393560.1| - 0.00074 19.9 0.8 0.027 14.9 0.1 2.3 2 0 0 2 2 2 1 AAA domain KTI12 PF08433.10 gi|16081254|ref|NP_393560.1| - 0.0021 17.6 0.0 0.0035 16.8 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Toxin_R_bind_C PF07951.12 gi|16081254|ref|NP_393560.1| - 0.012 15.3 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Clostridium neurotoxin, C-terminal receptor binding SKI PF01202.22 gi|16081254|ref|NP_393560.1| - 0.016 15.3 0.8 0.62 10.2 0.0 2.3 2 0 0 2 2 2 0 Shikimate kinase MobB PF03205.14 gi|16081254|ref|NP_393560.1| - 0.018 14.9 0.0 0.047 13.6 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.23 gi|16081254|ref|NP_393560.1| - 0.023 14.7 0.0 0.03 14.4 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF5644 PF18712.1 gi|16081254|ref|NP_393560.1| - 0.026 14.5 0.0 0.048 13.7 0.0 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5644) TsaE PF02367.17 gi|16081254|ref|NP_393560.1| - 0.034 14.1 2.2 0.31 11.0 0.3 2.2 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS_kinase PF01583.20 gi|16081254|ref|NP_393560.1| - 0.046 13.6 0.1 0.22 11.4 0.0 2.0 3 0 0 3 3 3 0 Adenylylsulphate kinase AAA_30 PF13604.6 gi|16081254|ref|NP_393560.1| - 0.063 13.0 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|16081254|ref|NP_393560.1| - 0.076 12.7 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Formyl_trans_N PF00551.19 gi|16081255|ref|NP_393561.1| - 4.3e-40 137.4 0.0 5.5e-40 137.0 0.0 1.1 1 0 0 1 1 1 1 Formyl transferase zf-CDGSH PF09360.10 gi|16081256|ref|NP_393562.1| - 6.3e-10 39.1 1.2 1.2e-09 38.2 1.2 1.5 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type S-l_SbsC_C PF18316.1 gi|16081256|ref|NP_393562.1| - 0.015 15.7 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 S-layer protein SbsC C-terminal domain LigB PF02900.18 gi|16081256|ref|NP_393562.1| - 0.025 13.6 0.0 0.027 13.6 0.0 1.1 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase ATPase PF06745.13 gi|16081257|ref|NP_393563.1| - 3.4e-10 39.7 0.0 4e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 KaiC MR_MLE_C PF13378.6 gi|16082480|ref|NP_393564.1| - 7.9e-49 166.2 0.0 1.1e-48 165.7 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|16082480|ref|NP_393564.1| - 4.5e-12 46.2 0.0 7.7e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Lactamase_B PF00753.27 gi|16081258|ref|NP_393565.1| - 5.5e-27 95.1 0.1 6.5e-27 94.8 0.1 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|16081258|ref|NP_393565.1| - 5e-07 29.4 0.0 6.7e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|16081258|ref|NP_393565.1| - 2.4e-05 24.3 0.0 3.2e-05 23.9 0.0 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|16081258|ref|NP_393565.1| - 0.00024 20.6 0.0 0.00069 19.1 0.0 1.7 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain PDEase_II PF02112.15 gi|16081258|ref|NP_393565.1| - 0.099 11.7 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II ABC2_membrane_2 PF12679.7 gi|16081259|ref|NP_393566.1| - 1.1e-10 41.3 24.6 1.5e-10 40.8 24.6 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|16081259|ref|NP_393566.1| - 0.0027 16.9 35.2 0.0027 16.9 35.2 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF2537 PF10801.8 gi|16081259|ref|NP_393566.1| - 0.031 14.5 2.3 1.3 9.3 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2537) ABC_tran PF00005.27 gi|16082481|ref|NP_393567.1| - 1.2e-17 64.7 0.0 1.9e-17 64.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16082481|ref|NP_393567.1| - 2.2e-09 37.6 2.4 0.00027 20.8 0.3 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SRP54 PF00448.22 gi|16082481|ref|NP_393567.1| - 0.00094 18.9 0.0 0.0046 16.6 0.0 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain DUF4162 PF13732.6 gi|16082481|ref|NP_393567.1| - 0.0029 18.3 0.2 0.0056 17.4 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|16082481|ref|NP_393567.1| - 0.0072 16.8 0.0 0.014 15.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|16082481|ref|NP_393567.1| - 0.0094 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|16082481|ref|NP_393567.1| - 0.056 13.0 0.0 0.095 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|16082481|ref|NP_393567.1| - 0.057 13.3 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain CLP1_P PF16575.5 gi|16082481|ref|NP_393567.1| - 0.14 12.0 0.5 0.95 9.2 0.0 2.4 3 0 0 3 3 3 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 gi|16082481|ref|NP_393567.1| - 0.17 11.6 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AIRS_C PF02769.22 gi|16081260|ref|NP_393568.1| - 3e-20 72.9 0.0 6.9e-20 71.7 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|16081260|ref|NP_393568.1| - 3.2e-12 46.9 3.0 5.7e-12 46.1 3.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Red1 PF07964.11 gi|16081260|ref|NP_393568.1| - 0.22 9.7 0.0 0.3 9.3 0.0 1.1 1 0 0 1 1 1 0 Rec10 / Red1 Ribosom_S12_S23 PF00164.25 gi|16081261|ref|NP_393569.1| - 3.2e-48 162.1 2.5 4e-48 161.8 2.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|16081262|ref|NP_393570.1| - 5e-42 143.0 1.7 6.3e-42 142.7 1.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Bac_DNA_binding PF00216.21 gi|16081263|ref|NP_393571.1| - 2.6e-20 72.4 2.9 3.3e-20 72.1 2.9 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 gi|16081263|ref|NP_393571.1| - 2.1e-05 24.6 0.2 2.5e-05 24.4 0.2 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 gi|16081263|ref|NP_393571.1| - 0.01 15.7 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 DUF5024 PF16427.5 gi|16081263|ref|NP_393571.1| - 0.54 10.6 4.4 4.1 7.8 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5024) CopD PF05425.13 gi|16081264|ref|NP_393572.1| - 1e-07 32.3 5.0 1e-07 32.3 5.0 2.0 1 1 1 2 2 2 1 Copper resistance protein D DUF2269 PF10027.9 gi|16081264|ref|NP_393572.1| - 6.2e-06 26.3 10.7 8.3e-06 25.9 10.7 1.1 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2269) DUF2749 PF10907.8 gi|16081264|ref|NP_393572.1| - 0.029 14.5 0.1 0.029 14.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) PhoLip_ATPase_C PF16212.5 gi|16081264|ref|NP_393572.1| - 0.12 12.1 11.2 0.97 9.1 1.0 2.0 1 1 1 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal PIRT PF15099.6 gi|16081264|ref|NP_393572.1| - 2.1 7.9 7.2 2.3 7.8 3.2 2.4 2 1 0 2 2 2 0 Phosphoinositide-interacting protein family SHR3_chaperone PF08229.11 gi|16081264|ref|NP_393572.1| - 2.3 7.2 7.8 3.3 6.7 7.8 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 TatC PF00902.18 gi|16081264|ref|NP_393572.1| - 4.1 7.2 12.5 3.9e+02 0.7 12.6 2.4 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF5611 PF18446.1 gi|16081265|ref|NP_393573.1| - 9.7e-25 87.4 0.2 1.1e-24 87.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) HMA PF00403.26 gi|16081265|ref|NP_393573.1| - 0.033 14.6 0.1 0.71 10.4 0.0 2.1 2 0 0 2 2 2 0 Heavy-metal-associated domain AP_endonuc_2 PF01261.24 gi|16081266|ref|NP_393574.1| - 1.9e-10 40.6 0.0 2.8e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|16081266|ref|NP_393574.1| - 0.0039 16.5 0.0 0.0084 15.4 0.0 1.5 1 1 0 1 1 1 1 UV-endonuclease UvdE MutS_III PF05192.18 gi|16081266|ref|NP_393574.1| - 0.067 13.4 0.2 0.32 11.2 0.1 1.9 2 0 0 2 2 2 0 MutS domain III Toprim_4 PF13662.6 gi|16082482|ref|NP_393575.1| - 8.7e-12 45.4 0.7 4.4e-11 43.1 0.1 2.5 3 0 0 3 3 3 1 Toprim domain Toprim_2 PF13155.6 gi|16082482|ref|NP_393575.1| - 3.6e-07 30.5 0.0 4.4e-06 27.0 0.0 2.6 3 0 0 3 3 3 1 Toprim-like Toprim PF01751.22 gi|16082482|ref|NP_393575.1| - 0.00064 19.9 1.3 0.0029 17.8 0.1 2.7 2 2 0 2 2 2 1 Toprim domain CelTOS PF18659.1 gi|16082482|ref|NP_393575.1| - 0.16 12.4 3.2 0.25 11.8 0.8 2.4 2 1 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites Mg_chelatase PF01078.21 gi|16081267|ref|NP_393576.1| - 2.3e-14 53.3 0.0 4.5e-08 32.7 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_32 PF13654.6 gi|16081267|ref|NP_393576.1| - 1e-13 51.0 0.2 2.5e-07 29.9 0.1 3.1 3 0 0 3 3 3 3 AAA domain Sigma54_activat PF00158.26 gi|16081267|ref|NP_393576.1| - 1.2e-10 41.3 0.0 5.5e-05 22.9 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|16081267|ref|NP_393576.1| - 9.3e-09 35.4 0.0 6.6e-05 22.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|16081267|ref|NP_393576.1| - 1.3e-07 31.5 0.0 0.002 17.9 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 gi|16081267|ref|NP_393576.1| - 1.7e-06 28.5 0.0 0.0025 18.2 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|16081267|ref|NP_393576.1| - 1.3e-05 24.5 0.0 0.008 15.3 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain AAA_22 PF13401.6 gi|16081267|ref|NP_393576.1| - 0.00018 21.8 0.0 0.011 16.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|16081267|ref|NP_393576.1| - 0.00039 20.8 0.0 0.0011 19.4 0.0 1.7 2 0 0 2 2 1 1 AAA ATPase domain MCM_lid PF17855.1 gi|16081267|ref|NP_393576.1| - 0.001 19.4 0.1 0.0031 17.9 0.0 1.8 2 0 0 2 2 1 1 MCM AAA-lid domain DUF35_N PF12172.8 gi|16081267|ref|NP_393576.1| - 0.0013 18.5 1.6 0.0024 17.7 1.6 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) TIP49 PF06068.13 gi|16081267|ref|NP_393576.1| - 0.0023 17.2 0.7 0.7 9.0 0.0 3.0 3 0 0 3 3 3 1 TIP49 P-loop domain AAA_14 PF13173.6 gi|16081267|ref|NP_393576.1| - 0.0037 17.3 0.1 2.7 8.1 0.0 3.4 3 1 1 4 4 4 1 AAA domain AAA_7 PF12775.7 gi|16081267|ref|NP_393576.1| - 0.0048 16.4 0.0 0.0094 15.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|16081267|ref|NP_393576.1| - 0.012 15.4 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_PrkA PF08298.11 gi|16081267|ref|NP_393576.1| - 0.013 14.4 0.0 0.24 10.3 0.0 2.3 2 0 0 2 2 2 0 PrkA AAA domain zf-ribbon_3 PF13248.6 gi|16081267|ref|NP_393576.1| - 0.015 14.7 5.9 0.026 13.9 5.9 1.4 1 0 0 1 1 1 0 zinc-ribbon domain TniB PF05621.11 gi|16081267|ref|NP_393576.1| - 0.02 14.3 0.0 0.16 11.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein DZR PF12773.7 gi|16081267|ref|NP_393576.1| - 0.022 14.7 0.3 0.04 13.9 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon AAA_19 PF13245.6 gi|16081267|ref|NP_393576.1| - 0.031 14.6 0.0 1.8 8.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|16081267|ref|NP_393576.1| - 0.035 13.8 0.0 0.72 9.5 0.0 2.5 3 0 0 3 3 3 0 AAA domain Sigma54_activ_2 PF14532.6 gi|16081267|ref|NP_393576.1| - 0.043 13.9 0.0 1.9 8.6 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain ABC_tran PF00005.27 gi|16081267|ref|NP_393576.1| - 0.051 14.1 0.0 0.18 12.3 0.0 2.0 2 0 0 2 2 1 0 ABC transporter HypA PF01155.19 gi|16081267|ref|NP_393576.1| - 0.054 13.5 0.2 0.14 12.2 0.2 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_30 PF13604.6 gi|16081267|ref|NP_393576.1| - 0.13 12.0 0.0 0.3 10.8 0.0 1.6 2 0 0 2 2 1 0 AAA domain SMC_N PF02463.19 gi|16081267|ref|NP_393576.1| - 0.14 11.6 0.0 0.26 10.7 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain TackOD1 PF18551.1 gi|16081267|ref|NP_393576.1| - 0.17 11.6 0.0 0.31 10.7 0.0 1.4 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Zn-ribbon_8 PF09723.10 gi|16081267|ref|NP_393576.1| - 0.24 11.5 2.8 0.58 10.3 2.8 1.6 1 0 0 1 1 1 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|16081267|ref|NP_393576.1| - 0.36 10.4 1.7 5.5 6.6 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|16081267|ref|NP_393576.1| - 0.91 9.3 5.0 1.7 8.5 5.0 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|16081267|ref|NP_393576.1| - 3.9 7.3 6.5 11 5.9 6.5 1.7 1 1 0 1 1 1 0 Rubredoxin metal binding domain tRNA-synt_His PF13393.6 gi|16081268|ref|NP_393577.1| - 5.3e-50 170.4 0.0 7e-50 170.0 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|16081268|ref|NP_393577.1| - 8.2e-12 45.5 0.0 2.3e-11 44.0 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|16081268|ref|NP_393577.1| - 2e-11 43.9 0.1 4.2e-11 42.8 0.1 1.5 1 0 0 1 1 1 1 Anticodon binding domain Stk19 PF10494.9 gi|16081269|ref|NP_393578.1| - 0.066 12.9 0.0 0.072 12.8 0.0 1.0 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 zf-ZPR1 PF03367.13 gi|16082483|ref|NP_393579.1| - 2e-34 118.7 0.1 2.4e-34 118.5 0.1 1.0 1 0 0 1 1 1 1 ZPR1 zinc-finger domain DUF3412 PF11892.8 gi|16082483|ref|NP_393579.1| - 0.0062 16.6 0.1 0.0087 16.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3412) Zn-ribbon_8 PF09723.10 gi|16082483|ref|NP_393579.1| - 0.022 14.9 4.0 0.26 11.4 1.0 2.4 2 0 0 2 2 2 0 Zinc ribbon domain GFA PF04828.14 gi|16082483|ref|NP_393579.1| - 0.037 14.4 0.2 0.24 11.8 0.0 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Lar_restr_allev PF14354.6 gi|16082483|ref|NP_393579.1| - 0.14 12.6 0.3 0.27 11.7 0.3 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar UPF0547 PF10571.9 gi|16082483|ref|NP_393579.1| - 0.81 9.8 3.5 2 8.5 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-RRN7 PF11781.8 gi|16082483|ref|NP_393579.1| - 1.6 8.5 5.4 9.5 6.0 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 FMN_dh PF01070.18 gi|16081270|ref|NP_393580.1| - 2.1e-20 73.1 0.0 5.4e-16 58.6 0.0 2.7 1 1 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|16081270|ref|NP_393580.1| - 0.00075 18.7 4.6 0.17 11.0 3.0 2.9 2 1 0 2 2 2 2 Conserved region in glutamate synthase IMPDH PF00478.25 gi|16081270|ref|NP_393580.1| - 0.0042 16.1 6.4 0.11 11.5 0.3 3.2 3 2 0 3 3 3 2 IMP dehydrogenase / GMP reductase domain AA_kinase PF00696.28 gi|16081271|ref|NP_393581.1| - 2.4e-31 109.2 0.0 3.4e-31 108.7 0.0 1.3 1 0 0 1 1 1 1 Amino acid kinase family Acetyltransf_3 PF13302.7 gi|16082484|ref|NP_393582.1| - 1.3e-17 64.8 0.0 1.6e-17 64.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16082484|ref|NP_393582.1| - 3.8e-12 46.6 0.1 4.6e-12 46.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|16082484|ref|NP_393582.1| - 3.4e-10 40.2 0.0 4.4e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16082484|ref|NP_393582.1| - 0.018 15.0 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16082484|ref|NP_393582.1| - 0.047 14.1 0.0 0.066 13.7 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Lactamase_B PF00753.27 gi|16081272|ref|NP_393583.1| - 2.2e-14 53.9 1.2 1.3e-13 51.4 1.2 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|16081272|ref|NP_393583.1| - 0.054 13.0 0.0 0.073 12.6 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain CBS PF00571.28 gi|16081273|ref|NP_393584.1| - 5.4e-21 74.8 1.6 4.7e-12 46.2 0.1 2.5 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.22 gi|16081273|ref|NP_393584.1| - 3.8e-15 55.7 0.5 8e-15 54.6 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|16081273|ref|NP_393584.1| - 5.5e-12 45.5 0.4 2.6e-11 43.4 0.3 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|16081273|ref|NP_393584.1| - 1.3e-10 41.4 0.0 2.4e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|16081273|ref|NP_393584.1| - 2.7e-05 23.9 0.0 5.3e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|16081273|ref|NP_393584.1| - 0.00039 20.8 0.0 0.0011 19.3 0.0 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 gi|16081273|ref|NP_393584.1| - 0.00044 20.1 0.1 0.0013 18.7 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|16081273|ref|NP_393584.1| - 0.00049 20.2 0.0 0.00082 19.5 0.0 1.3 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HNF-1_N PF04814.13 gi|16081273|ref|NP_393584.1| - 0.0011 19.7 0.0 0.0017 19.0 0.0 1.3 1 0 0 1 1 1 1 Hepatocyte nuclear factor 1 (HNF-1), N terminus Pou PF00157.17 gi|16081273|ref|NP_393584.1| - 0.0078 16.2 0.0 0.037 14.0 0.0 2.1 2 1 0 2 2 2 1 Pou domain - N-terminal to homeobox domain HTH_24 PF13412.6 gi|16081273|ref|NP_393584.1| - 0.014 14.9 0.1 0.047 13.3 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF3659 PF12396.8 gi|16081273|ref|NP_393584.1| - 0.045 13.7 0.7 0.29 11.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) HTH_23 PF13384.6 gi|16081273|ref|NP_393584.1| - 0.088 12.6 0.0 0.26 11.1 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain CarS-like PF01864.17 gi|16081274|ref|NP_393585.1| - 1.6e-42 145.5 10.1 1.7e-42 145.3 10.1 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|16081274|ref|NP_393585.1| - 2.3e-07 30.9 6.4 2.3e-07 30.9 6.4 1.7 1 1 1 2 2 2 1 Cytidylyltransferase family DUF3792 PF12670.7 gi|16081274|ref|NP_393585.1| - 0.33 11.1 13.1 0.057 13.6 9.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3792) PTH2 PF01981.16 gi|16081275|ref|NP_393586.1| - 4e-40 136.8 0.1 4.5e-40 136.6 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Elf1 PF05129.13 gi|16081275|ref|NP_393586.1| - 0.065 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Trehalose_PPase PF02358.16 gi|16081275|ref|NP_393586.1| - 0.11 11.6 0.9 6.2 5.9 0.1 2.0 1 1 1 2 2 2 0 Trehalose-phosphatase PhoU PF01895.19 gi|16081277|ref|NP_393588.1| - 1.4e-17 63.9 11.0 8.4e-15 55.0 6.3 2.9 2 1 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|16081277|ref|NP_393588.1| - 5.9e-08 32.5 0.1 1.7e-07 31.0 0.1 1.8 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Phage_holin_6_1 PF09682.10 gi|16081277|ref|NP_393588.1| - 0.048 14.1 0.3 0.12 12.8 0.1 1.7 2 0 0 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) Aconitase PF00330.20 gi|161760540|ref|NP_393590.2| - 5.5e-179 596.0 0.0 8.2e-179 595.4 0.0 1.2 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|161760540|ref|NP_393590.2| - 1.7e-43 148.0 0.0 4.5e-43 146.7 0.0 1.7 1 0 0 1 1 1 1 Aconitase C-terminal domain Amidase02_C PF12123.8 gi|161760540|ref|NP_393590.2| - 0.088 12.5 0.0 0.28 10.9 0.0 1.8 1 0 0 1 1 1 0 N-acetylmuramoyl-l-alanine amidase PALP PF00291.25 gi|16081279|ref|NP_393591.1| - 3.2e-84 282.8 0.1 4.1e-84 282.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT_4 PF13291.6 gi|16081279|ref|NP_393591.1| - 4.5e-10 40.0 0.0 8.9e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|16081279|ref|NP_393591.1| - 0.00037 20.2 0.0 0.00087 19.0 0.0 1.7 1 0 0 1 1 1 1 ACT domain MTS PF05175.14 gi|16081280|ref|NP_393592.1| - 2.6e-18 66.1 0.0 4.1e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|16081280|ref|NP_393592.1| - 1.2e-08 34.7 0.1 1.7e-08 34.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|16081280|ref|NP_393592.1| - 1.6e-08 35.1 0.0 8e-08 32.9 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16081280|ref|NP_393592.1| - 1.6e-07 31.3 0.0 4.2e-07 29.9 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16081280|ref|NP_393592.1| - 3.9e-06 26.7 0.0 4.9e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16081280|ref|NP_393592.1| - 6.5e-06 26.7 0.0 1.4e-05 25.6 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081280|ref|NP_393592.1| - 7.2e-05 23.5 0.1 0.00024 21.8 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|16081280|ref|NP_393592.1| - 0.00043 20.1 0.1 0.00086 19.1 0.0 1.5 2 0 0 2 2 2 1 Lysine methyltransferase TehB PF03848.14 gi|16081280|ref|NP_393592.1| - 0.0022 17.4 0.0 0.0033 16.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB UPF0020 PF01170.18 gi|16081280|ref|NP_393592.1| - 0.0038 16.9 0.0 0.0054 16.4 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 UPF0146 PF03686.13 gi|16081280|ref|NP_393592.1| - 0.0053 16.6 0.0 0.009 15.9 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) DUF2431 PF10354.9 gi|16081280|ref|NP_393592.1| - 0.0073 16.6 0.0 0.0084 16.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Methyltransf_18 PF12847.7 gi|16081280|ref|NP_393592.1| - 0.04 13.8 0.0 0.067 13.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|16081280|ref|NP_393592.1| - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_15 PF09445.10 gi|16081280|ref|NP_393592.1| - 0.15 11.6 0.2 0.28 10.7 0.2 1.4 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase TPMT PF05724.11 gi|16081280|ref|NP_393592.1| - 0.24 11.0 0.0 0.37 10.4 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) HTH_17 PF12728.7 gi|16081281|ref|NP_393593.1| - 1.8e-05 24.8 1.2 7.1e-05 22.9 0.2 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|16081281|ref|NP_393593.1| - 2.3e-05 24.2 0.0 4.4e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|16081281|ref|NP_393593.1| - 4.6e-05 23.4 0.0 6.8e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|16081281|ref|NP_393593.1| - 0.00011 21.9 0.0 0.00024 20.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|16081281|ref|NP_393593.1| - 0.0015 18.5 0.0 0.0022 17.9 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|16081281|ref|NP_393593.1| - 0.0017 18.2 0.0 0.0033 17.3 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Mga PF05043.13 gi|16081281|ref|NP_393593.1| - 0.003 18.1 0.3 0.003 18.1 0.3 1.6 2 0 0 2 2 1 1 Mga helix-turn-helix domain FUR PF01475.19 gi|16081281|ref|NP_393593.1| - 0.0066 16.6 0.1 0.009 16.1 0.1 1.3 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_29 PF13551.6 gi|16081281|ref|NP_393593.1| - 0.044 13.8 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix pXO2-72 PF17443.2 gi|16081281|ref|NP_393593.1| - 0.046 14.0 4.9 1.1 9.6 1.5 2.3 1 1 1 2 2 2 0 Uncharacterized protein pXO2-72 Tcf25 PF04910.14 gi|16081281|ref|NP_393593.1| - 0.05 12.7 0.1 0.052 12.6 0.1 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 HTH_7 PF02796.15 gi|16081281|ref|NP_393593.1| - 0.058 13.5 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_IclR PF09339.10 gi|16081281|ref|NP_393593.1| - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF3698 PF12479.8 gi|16081281|ref|NP_393593.1| - 0.073 13.6 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3698) Replic_Relax PF13814.6 gi|16081281|ref|NP_393593.1| - 0.12 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation HTH_DeoR PF08220.12 gi|16081281|ref|NP_393593.1| - 0.13 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DHquinase_I PF01487.15 gi|16081282|ref|NP_393594.1| - 6.4e-13 49.5 0.2 1e-12 48.8 0.2 1.3 1 0 0 1 1 1 1 Type I 3-dehydroquinase Fmp27_GFWDK PF10347.9 gi|16081282|ref|NP_393594.1| - 0.026 14.7 0.1 0.037 14.1 0.1 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain GcpE PF04551.14 gi|16081282|ref|NP_393594.1| - 0.029 13.4 0.0 1.3 8.0 0.0 2.0 2 0 0 2 2 2 0 GcpE protein Iso_dh PF00180.20 gi|16081283|ref|NP_393595.1| - 1e-108 363.6 0.0 1.2e-108 363.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PTS_2-RNA PF01885.16 gi|16082485|ref|NP_393596.1| - 2.8e-25 89.4 0.0 3.7e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Pribosyltran_N PF13793.6 gi|16082486|ref|NP_393597.1| - 4.9e-27 94.2 0.0 1.2e-25 89.8 0.0 2.3 2 1 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|16082486|ref|NP_393597.1| - 1.4e-16 60.4 0.1 1.1e-15 57.5 0.3 2.1 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|16082486|ref|NP_393597.1| - 4.4e-10 39.9 0.4 7.9e-10 39.1 0.4 1.3 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|16082486|ref|NP_393597.1| - 0.00018 21.0 0.0 0.00098 18.6 0.0 1.9 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase Intein_splicing PF14890.6 gi|16082486|ref|NP_393597.1| - 0.014 15.3 0.3 0.045 13.7 0.2 1.8 1 1 1 2 2 2 0 Intein splicing domain Endonuc-PvuII PF09225.10 gi|16082486|ref|NP_393597.1| - 0.02 14.6 0.0 0.055 13.2 0.0 1.7 2 0 0 2 2 2 0 Restriction endonuclease PvuII DinI PF06183.13 gi|16082486|ref|NP_393597.1| - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 DinI-like family PRTase_2 PF15609.6 gi|16082486|ref|NP_393597.1| - 0.13 11.8 0.1 0.22 11.0 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase ECH_1 PF00378.20 gi|16081285|ref|NP_393599.1| - 7.9e-49 166.2 0.0 1e-48 165.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|16081285|ref|NP_393599.1| - 7e-37 127.7 0.0 8.1e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|16081285|ref|NP_393599.1| - 0.016 15.2 0.1 1.2 9.1 0.0 2.3 2 0 0 2 2 2 0 Peptidase family S49 GMP_synt_C PF00958.22 gi|16081285|ref|NP_393599.1| - 0.095 12.8 0.0 4.1 7.5 0.0 2.2 2 0 0 2 2 2 0 GMP synthase C terminal domain BcrAD_BadFG PF01869.20 gi|16081286|ref|NP_393600.1| - 7.3e-58 196.2 1.4 9.4e-58 195.8 1.4 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|16081286|ref|NP_393600.1| - 0.0011 18.6 0.1 0.036 13.6 0.0 2.1 2 0 0 2 2 2 2 ROK family PEPCK_GTP PF00821.18 gi|16081287|ref|NP_393601.1| - 8.3e-150 498.6 0.0 1.4e-149 497.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PEPCK_N PF17297.2 gi|16081287|ref|NP_393601.1| - 7.4e-69 231.7 0.0 1.1e-68 231.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase N-terminal domain tRNA-synt_2c PF01411.19 gi|16082487|ref|NP_393602.1| - 1e-18 67.2 1.3 1.1e-18 67.1 0.3 1.5 2 0 0 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|16082487|ref|NP_393602.1| - 2e-07 31.0 0.9 4e-07 30.0 0.9 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Thioredoxin_3 PF13192.6 gi|16081288|ref|NP_393603.1| - 7e-28 96.5 1.3 1.9e-16 59.9 0.1 2.2 2 0 0 2 2 2 2 Thioredoxin domain Glutaredoxin PF00462.24 gi|16081288|ref|NP_393603.1| - 3.9e-14 52.6 1.2 2.2e-09 37.4 0.0 2.5 2 0 0 2 2 2 2 Glutaredoxin Thioredoxin PF00085.20 gi|16081288|ref|NP_393603.1| - 6.4e-10 38.9 0.4 7.1e-05 22.7 0.1 2.2 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_9 PF14595.6 gi|16081288|ref|NP_393603.1| - 1.5e-09 37.7 0.0 0.00034 20.4 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin ABC_transp_aux PF09822.9 gi|16081288|ref|NP_393603.1| - 1.9e-09 37.4 0.1 0.00043 19.8 0.0 2.1 2 0 0 2 2 2 2 ABC-type uncharacterized transport system Thioredoxin_2 PF13098.6 gi|16081288|ref|NP_393603.1| - 2.9e-05 24.5 5.4 0.13 12.8 0.5 3.4 2 2 0 2 2 2 2 Thioredoxin-like domain TraF PF13728.6 gi|16081288|ref|NP_393603.1| - 0.0012 18.7 0.0 0.97 9.2 0.0 2.9 2 2 0 2 2 2 2 F plasmid transfer operon protein Thioredoxin_4 PF13462.6 gi|16081288|ref|NP_393603.1| - 0.0087 16.2 4.9 2.1 8.5 0.2 3.1 2 2 2 4 4 4 2 Thioredoxin Polbeta PF18765.1 gi|16081288|ref|NP_393603.1| - 0.01 15.9 0.1 0.024 14.7 0.1 1.6 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Thioredoxin_8 PF13905.6 gi|16081288|ref|NP_393603.1| - 0.027 14.8 0.9 0.097 13.0 0.4 2.0 2 0 0 2 2 2 0 Thioredoxin-like DSBA PF01323.20 gi|16081288|ref|NP_393603.1| - 0.057 13.2 1.0 0.62 9.8 0.0 2.7 2 1 1 3 3 3 0 DSBA-like thioredoxin domain DUF836 PF05768.14 gi|16081288|ref|NP_393603.1| - 0.099 13.1 1.0 4.3 7.8 0.1 2.4 2 1 0 2 2 2 0 Glutaredoxin-like domain (DUF836) BPD_transp_1 PF00528.22 gi|16081290|ref|NP_393605.1| - 2e-18 66.8 24.6 2e-18 66.8 24.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|16081291|ref|NP_393606.1| - 4.2e-20 72.3 22.2 4.2e-20 72.3 22.2 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Glyco_hydro_57 PF03065.15 gi|16081292|ref|NP_393607.1| - 1.6e-103 346.4 3.5 1.6e-103 346.4 3.5 2.0 2 0 0 2 2 2 1 Glycosyl hydrolase family 57 Glucodextran_C PF09985.9 gi|16081292|ref|NP_393607.1| - 1.4e-43 149.0 0.8 2.4e-43 148.2 0.8 1.4 1 0 0 1 1 1 1 C-terminal binding-module, SLH-like, of glucodextranase ABC_tran PF00005.27 gi|16081293|ref|NP_393608.1| - 1.6e-29 103.2 0.0 2.5e-29 102.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081293|ref|NP_393608.1| - 1.2e-08 35.2 0.1 0.005 16.7 0.0 2.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 gi|16081293|ref|NP_393608.1| - 5.1e-08 33.6 0.1 1.7e-07 31.9 0.1 2.0 1 0 0 1 1 1 1 MalK OB fold domain SMC_N PF02463.19 gi|16081293|ref|NP_393608.1| - 4.1e-05 23.1 0.9 0.037 13.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 gi|16081293|ref|NP_393608.1| - 0.00043 20.8 0.0 0.0015 19.0 0.0 2.0 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA_29 PF13555.6 gi|16081293|ref|NP_393608.1| - 0.00075 19.2 0.1 0.0017 18.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|16081293|ref|NP_393608.1| - 0.0029 18.1 0.7 0.0068 16.9 0.7 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|16081293|ref|NP_393608.1| - 0.0079 16.1 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase ATPase_2 PF01637.18 gi|16081293|ref|NP_393608.1| - 0.0086 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|16081293|ref|NP_393608.1| - 0.02 14.6 0.0 0.09 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain Cytidylate_kin PF02224.18 gi|16081293|ref|NP_393608.1| - 0.036 13.8 1.7 0.087 12.5 0.2 2.2 2 1 0 2 2 2 0 Cytidylate kinase PhoH PF02562.16 gi|16081293|ref|NP_393608.1| - 0.058 12.8 0.0 4.6 6.6 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.6 gi|16081293|ref|NP_393608.1| - 0.074 13.6 0.0 0.13 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|16081293|ref|NP_393608.1| - 0.076 13.3 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16081293|ref|NP_393608.1| - 0.079 13.3 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 gi|16081293|ref|NP_393608.1| - 0.087 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain MMR_HSR1 PF01926.23 gi|16081293|ref|NP_393608.1| - 0.11 12.6 0.0 0.53 10.4 0.0 2.2 1 1 1 2 2 2 0 50S ribosome-binding GTPase HxlR PF01638.17 gi|16081294|ref|NP_393609.1| - 1.2e-21 76.4 0.0 1.4e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|16081294|ref|NP_393609.1| - 0.00012 22.0 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|16081294|ref|NP_393609.1| - 0.00078 19.4 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|16081294|ref|NP_393609.1| - 0.002 18.1 0.0 0.0033 17.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|16081294|ref|NP_393609.1| - 0.0023 17.8 0.0 0.0051 16.7 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|16081294|ref|NP_393609.1| - 0.025 14.1 0.2 0.05 13.2 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|16081294|ref|NP_393609.1| - 0.049 13.4 0.0 0.097 12.5 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_5 PF01022.20 gi|16081294|ref|NP_393609.1| - 0.053 13.4 0.0 0.098 12.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|16081294|ref|NP_393609.1| - 0.054 13.4 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 MarR family RP-C PF03428.13 gi|16081294|ref|NP_393609.1| - 0.16 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_20 PF12840.7 gi|16081294|ref|NP_393609.1| - 0.2 11.7 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain YceI PF04264.13 gi|16081295|ref|NP_393610.1| - 4.9e-40 137.4 0.3 5.6e-40 137.3 0.3 1.0 1 0 0 1 1 1 1 YceI-like domain Pirin PF02678.16 gi|16082488|ref|NP_393611.1| - 6.9e-31 106.4 0.4 6.1e-30 103.4 0.1 2.4 3 0 0 3 3 3 1 Pirin Pirin_C PF05726.13 gi|16082488|ref|NP_393611.1| - 7.7e-30 103.3 0.0 2.3e-29 101.8 0.0 1.8 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin_C_2 PF17954.1 gi|16082488|ref|NP_393611.1| - 0.035 14.3 0.0 0.078 13.2 0.0 1.5 1 0 0 1 1 1 0 Quercetinase C-terminal cupin domain Regulator_TrmB PF11495.8 gi|16081296|ref|NP_393612.1| - 7.7e-67 224.9 0.4 9.5e-67 224.6 0.4 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|16081296|ref|NP_393612.1| - 8.3e-23 80.1 0.1 1.5e-22 79.2 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB CemA PF03040.14 gi|16081296|ref|NP_393612.1| - 0.0039 17.2 0.6 0.0078 16.2 0.5 1.5 2 0 0 2 2 2 1 CemA family NADH-UOR_E PF16514.5 gi|16081296|ref|NP_393612.1| - 0.02 15.2 0.6 0.038 14.3 0.6 1.4 1 0 0 1 1 1 0 putative NADH-ubiquinone oxidoreductase chain E Cupin_2 PF07883.11 gi|16081297|ref|NP_393613.1| - 1e-16 60.4 0.2 1.8e-16 59.6 0.2 1.4 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|16081297|ref|NP_393613.1| - 2.9e-09 36.9 0.0 3.6e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|16081297|ref|NP_393613.1| - 8.6e-08 32.2 0.1 1e-07 32.0 0.1 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_7 PF12973.7 gi|16081297|ref|NP_393613.1| - 6.3e-06 26.0 0.0 9.7e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 ChrR Cupin-like domain Ectoine_synth PF06339.12 gi|16081297|ref|NP_393613.1| - 2.7e-05 24.4 0.1 3.3e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase EutQ PF06249.12 gi|16081297|ref|NP_393613.1| - 4e-05 23.4 0.0 4.7e-05 23.2 0.0 1.2 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 gi|16081297|ref|NP_393613.1| - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) DUF4437 PF14499.6 gi|16081297|ref|NP_393613.1| - 0.0014 17.8 0.0 0.0016 17.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4437) DMSP_lyase PF16867.5 gi|16081297|ref|NP_393613.1| - 0.0022 17.7 0.2 0.0036 17.0 0.2 1.2 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase KduI PF04962.12 gi|16081297|ref|NP_393613.1| - 0.0096 15.3 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 KduI/IolB family AraC_binding_2 PF14525.6 gi|16081297|ref|NP_393613.1| - 0.01 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 AraC-binding-like domain ARD PF03079.14 gi|16081297|ref|NP_393613.1| - 0.058 13.6 0.2 0.078 13.2 0.2 1.2 1 0 0 1 1 1 0 ARD/ARD' family CENP-C_C PF11699.8 gi|16081297|ref|NP_393613.1| - 0.14 12.3 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like Oxidored_molyb PF00174.19 gi|16081298|ref|NP_393614.1| - 1.1e-36 126.1 0.0 1.4e-36 125.7 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain RasGEF PF00617.19 gi|16081298|ref|NP_393614.1| - 0.2 11.9 0.0 0.3 11.3 0.0 1.2 1 0 0 1 1 1 0 RasGEF domain MFS_1 PF07690.16 gi|16081299|ref|NP_393615.1| - 2.8e-08 33.1 49.7 3e-06 26.4 20.7 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Alpha-amylase PF00128.24 gi|16081300|ref|NP_393616.1| - 1.5e-62 212.1 1.4 1.1e-61 209.3 1.4 2.0 1 1 0 1 1 1 1 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 gi|16081300|ref|NP_393616.1| - 0.0032 16.6 0.3 0.0081 15.3 0.0 1.7 2 0 0 2 2 2 1 Glycogen debranching enzyme, glucanotransferase domain DUF3244 PF11589.8 gi|16081300|ref|NP_393616.1| - 0.056 13.5 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) SAM_MT PF04445.13 gi|16081300|ref|NP_393616.1| - 0.093 12.1 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase P5CR_dimer PF14748.6 gi|16081301|ref|NP_393617.1| - 3.4e-32 110.7 0.1 5.6e-32 110.1 0.1 1.4 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|16081301|ref|NP_393617.1| - 6.1e-18 65.2 1.3 1.1e-17 64.4 1.3 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|16081301|ref|NP_393617.1| - 1.4e-11 44.2 0.7 4.8e-11 42.5 0.6 2.0 2 1 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 gi|16081301|ref|NP_393617.1| - 7.8e-08 32.6 0.5 1.3e-07 31.9 0.5 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|16081301|ref|NP_393617.1| - 2.2e-05 23.9 0.1 3.4e-05 23.3 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|16081301|ref|NP_393617.1| - 5e-05 23.3 0.5 0.00012 22.1 0.4 1.7 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 gi|16081301|ref|NP_393617.1| - 0.00032 20.5 3.5 0.00078 19.3 3.5 1.6 1 1 0 1 1 1 1 Rossmann-like domain IlvN PF07991.12 gi|16081301|ref|NP_393617.1| - 0.00063 19.3 0.1 0.0012 18.4 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 gi|16081301|ref|NP_393617.1| - 0.00064 19.7 3.9 0.083 12.9 3.9 2.6 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.14 gi|16081301|ref|NP_393617.1| - 0.0088 15.3 0.1 0.014 14.7 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase adh_short PF00106.25 gi|16081301|ref|NP_393617.1| - 0.046 13.2 0.1 0.086 12.3 0.1 1.6 1 0 0 1 1 1 0 short chain dehydrogenase DAO PF01266.24 gi|16081301|ref|NP_393617.1| - 0.089 12.4 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NmrA PF05368.13 gi|16081301|ref|NP_393617.1| - 0.12 11.9 0.8 0.23 11.0 0.8 1.4 1 0 0 1 1 1 0 NmrA-like family ThiF PF00899.21 gi|16081301|ref|NP_393617.1| - 0.14 11.5 0.7 0.31 10.4 0.2 1.7 2 0 0 2 2 2 0 ThiF family Epimerase PF01370.21 gi|16081301|ref|NP_393617.1| - 0.15 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family UDPG_MGDP_dh_N PF03721.14 gi|16081301|ref|NP_393617.1| - 0.19 11.3 2.7 0.19 11.3 0.8 1.8 1 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Rieske PF00355.26 gi|16081302|ref|NP_393618.1| - 2.3e-11 43.5 0.0 2.6e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|16081302|ref|NP_393618.1| - 8e-06 25.7 0.0 9.8e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain MFS_1 PF07690.16 gi|16081303|ref|NP_393619.1| - 1.9e-21 76.4 58.4 1.9e-21 76.4 58.4 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16081303|ref|NP_393619.1| - 2.9e-19 69.3 46.8 3.4e-16 59.2 12.7 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter DUF1449 PF07290.11 gi|16081303|ref|NP_393619.1| - 0.02 14.6 6.7 0.036 13.7 5.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) AA_permease_2 PF13520.6 gi|16081304|ref|NP_393620.1| - 3e-43 148.3 55.8 3e-43 148.3 55.8 1.8 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16081304|ref|NP_393620.1| - 2e-29 102.5 50.4 2e-29 102.5 50.4 2.1 1 1 1 2 2 2 1 Amino acid permease DUF4014 PF13198.6 gi|16081304|ref|NP_393620.1| - 1.2 9.6 5.7 1.2 9.6 0.4 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF4014) ABC_tran PF00005.27 gi|16081305|ref|NP_393621.1| - 1.9e-37 128.8 0.0 3.7e-37 127.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081305|ref|NP_393621.1| - 3.9e-09 36.8 0.7 0.00028 20.8 0.4 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16081305|ref|NP_393621.1| - 4e-06 26.4 0.7 8.7e-05 22.1 0.7 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|16081305|ref|NP_393621.1| - 0.00042 20.2 0.2 0.0011 18.9 0.1 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 gi|16081305|ref|NP_393621.1| - 0.001 19.6 3.7 0.003 18.1 1.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|16081305|ref|NP_393621.1| - 0.0012 18.5 0.2 0.0028 17.4 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|16081305|ref|NP_393621.1| - 0.0047 16.7 0.0 0.023 14.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|16081305|ref|NP_393621.1| - 0.0093 15.6 0.2 0.7 9.4 0.1 2.3 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|16081305|ref|NP_393621.1| - 0.013 15.4 0.0 0.027 14.4 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_22 PF13401.6 gi|16081305|ref|NP_393621.1| - 0.018 15.3 0.5 0.048 13.9 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16081305|ref|NP_393621.1| - 0.036 14.5 0.2 0.091 13.1 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_27 PF13514.6 gi|16081305|ref|NP_393621.1| - 0.049 13.2 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|16081305|ref|NP_393621.1| - 0.05 12.6 0.0 0.079 12.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ATPase_2 PF01637.18 gi|16081305|ref|NP_393621.1| - 0.071 13.0 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 gi|16081305|ref|NP_393621.1| - 0.089 13.2 0.1 0.2 12.1 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|16081305|ref|NP_393621.1| - 0.091 12.7 2.0 0.86 9.5 0.2 2.5 2 1 1 3 3 3 0 NACHT domain MMR_HSR1 PF01926.23 gi|16081305|ref|NP_393621.1| - 0.096 12.8 0.2 0.17 12.0 0.2 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase SbcCD_C PF13558.6 gi|16081305|ref|NP_393621.1| - 0.11 12.8 0.2 1.3 9.3 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|16081305|ref|NP_393621.1| - 0.11 12.2 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein PIF1 PF05970.14 gi|16081305|ref|NP_393621.1| - 0.12 11.5 0.1 0.25 10.5 0.1 1.5 1 0 0 1 1 1 0 PIF1-like helicase AAA_28 PF13521.6 gi|16081305|ref|NP_393621.1| - 0.24 11.7 1.0 0.43 10.8 0.2 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|16081305|ref|NP_393621.1| - 0.24 11.6 0.8 0.87 9.7 0.8 2.0 1 1 0 1 1 1 0 AAA domain SBP_bac_1 PF01547.25 gi|16081306|ref|NP_393622.1| - 9.7e-21 75.0 0.1 2.9e-20 73.5 0.1 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|16081306|ref|NP_393622.1| - 0.013 15.3 0.0 0.5 10.1 0.0 2.3 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|16081307|ref|NP_393623.1| - 3.9e-09 36.5 26.6 3.9e-09 36.5 26.6 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|16081308|ref|NP_393624.1| - 3.8e-14 52.8 20.5 3.8e-14 52.8 20.5 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component GDE_C PF06202.14 gi|16081309|ref|NP_393625.1| - 6.7e-09 35.1 0.0 5.7e-08 32.1 0.0 2.3 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Glyco_hydro_63 PF03200.16 gi|16081309|ref|NP_393625.1| - 0.0021 16.9 0.0 0.0035 16.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 63 C-terminal domain AA_permease_2 PF13520.6 gi|16081310|ref|NP_393626.1| - 3.8e-37 128.1 62.0 4.8e-36 124.5 61.9 2.0 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16081310|ref|NP_393626.1| - 4.4e-27 94.8 59.4 2.7e-26 92.2 59.4 1.9 1 1 0 1 1 1 1 Amino acid permease HPP PF04982.13 gi|16081310|ref|NP_393626.1| - 0.0012 19.0 3.6 0.008 16.4 3.6 2.5 1 0 0 1 1 1 1 HPP family MFS_1 PF07690.16 gi|16081311|ref|NP_393627.1| - 8.6e-23 80.8 46.1 4.7e-12 45.5 18.8 2.9 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 gi|16081311|ref|NP_393627.1| - 0.024 13.4 26.8 0.23 10.2 9.3 2.2 2 0 0 2 2 2 0 LacY proton/sugar symporter DUF3575 PF12099.8 gi|16081312|ref|NP_393628.1| - 0.069 12.5 0.5 1.4 8.2 0.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3575) DUF4181 PF13789.6 gi|16082489|ref|NP_393629.1| - 0.0026 18.0 1.1 0.72 10.1 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4181) AhpC-TSA PF00578.21 gi|16081313|ref|NP_393630.1| - 9.6e-42 141.8 0.3 1.1e-41 141.6 0.3 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|16081313|ref|NP_393630.1| - 2.2e-18 66.4 0.1 2.6e-18 66.2 0.1 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|16081313|ref|NP_393630.1| - 0.00059 19.7 0.1 0.00088 19.2 0.1 1.3 1 1 0 1 1 1 1 SCO1/SenC Thioredoxin_8 PF13905.6 gi|16081313|ref|NP_393630.1| - 0.00079 19.7 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like 1-cysPrx_C PF10417.9 gi|16081313|ref|NP_393630.1| - 0.0023 17.7 0.3 0.0062 16.4 0.1 1.8 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin Glycos_transf_2 PF00535.26 gi|16081314|ref|NP_393631.1| - 2.2e-26 92.6 0.0 2.8e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|16081314|ref|NP_393631.1| - 1.1e-12 48.3 0.0 1.3e-12 48.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|16081314|ref|NP_393631.1| - 0.0022 17.5 0.0 0.0031 17.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|16081314|ref|NP_393631.1| - 0.079 12.9 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 MFS_1 PF07690.16 gi|16081315|ref|NP_393632.1| - 5.8e-09 35.3 42.2 5.8e-09 35.3 42.2 1.9 2 1 0 2 2 2 1 Major Facilitator Superfamily SepF PF04472.12 gi|16082490|ref|NP_393633.1| - 1.6e-14 53.9 0.3 2.3e-14 53.4 0.3 1.2 1 0 0 1 1 1 1 Cell division protein SepF MFS_1 PF07690.16 gi|16081316|ref|NP_393634.1| - 4e-38 131.2 48.8 2.7e-33 115.3 35.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|16081316|ref|NP_393634.1| - 5.5e-06 25.5 27.6 2.7e-05 23.2 27.6 2.0 1 1 0 1 1 1 1 MFS_1 like family DUF1304 PF06993.12 gi|16081316|ref|NP_393634.1| - 0.022 14.7 1.4 0.022 14.7 1.4 3.7 3 2 1 4 4 4 0 Protein of unknown function (DUF1304) MFS_3 PF05977.13 gi|16081316|ref|NP_393634.1| - 0.21 9.9 13.0 0.5 8.7 3.8 2.1 2 0 0 2 2 2 0 Transmembrane secretion effector SMC_N PF02463.19 gi|16081317|ref|NP_393635.1| - 1.4e-28 99.8 5.1 2.2e-28 99.2 5.1 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|16081317|ref|NP_393635.1| - 7.5e-22 78.8 16.0 7.5e-22 78.8 16.0 5.5 1 1 2 3 3 2 1 AAA domain Rad50_zn_hook PF04423.14 gi|16081317|ref|NP_393635.1| - 4e-11 42.6 0.3 4e-11 42.6 0.3 3.8 2 0 0 2 2 2 1 Rad50 zinc hook motif AAA_15 PF13175.6 gi|16081317|ref|NP_393635.1| - 9.5e-11 42.0 53.2 2e-05 24.5 38.5 3.4 1 1 1 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|16081317|ref|NP_393635.1| - 4.2e-08 33.3 19.0 9.6e-05 22.3 2.6 3.7 3 2 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|16081317|ref|NP_393635.1| - 4.3e-08 32.8 0.0 8.4e-08 31.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|16081317|ref|NP_393635.1| - 2.5e-07 30.5 0.1 2.5e-07 30.5 0.1 3.9 4 0 0 4 4 4 1 AAA domain ABC_tran PF00005.27 gi|16081317|ref|NP_393635.1| - 5.5e-06 26.9 16.4 0.027 15.0 0.0 5.2 2 1 0 3 3 3 2 ABC transporter SbcCD_C PF13558.6 gi|16081317|ref|NP_393635.1| - 6.5e-06 26.3 0.2 3e-05 24.2 0.1 2.3 2 0 0 2 2 1 1 Putative exonuclease SbcCD, C subunit SHE3 PF17078.5 gi|16081317|ref|NP_393635.1| - 0.00026 20.8 21.6 0.00026 20.8 21.6 5.2 1 1 1 3 3 2 1 SWI5-dependent HO expression protein 3 Seryl_tRNA_N PF02403.22 gi|16081317|ref|NP_393635.1| - 0.00069 19.8 68.5 0.022 15.0 1.3 8.9 5 3 3 8 8 8 3 Seryl-tRNA synthetase N-terminal domain RsgA_GTPase PF03193.16 gi|16081317|ref|NP_393635.1| - 0.0045 16.9 0.4 0.033 14.1 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase TFR_dimer PF04253.15 gi|16081317|ref|NP_393635.1| - 0.0058 16.7 1.5 0.0058 16.7 1.5 4.4 4 3 1 6 6 6 1 Transferrin receptor-like dimerisation domain Spc7 PF08317.11 gi|16081317|ref|NP_393635.1| - 0.0059 15.5 69.7 0.11 11.4 12.2 5.2 2 1 3 5 5 5 3 Spc7 kinetochore protein Baculo_PEP_C PF04513.12 gi|16081317|ref|NP_393635.1| - 0.0062 16.6 12.0 0.72 9.9 0.0 5.6 3 3 1 5 5 5 2 Baculovirus polyhedron envelope protein, PEP, C terminus MukB PF04310.12 gi|16081317|ref|NP_393635.1| - 0.027 14.3 4.6 1.1 9.0 0.0 3.9 3 1 0 4 4 4 0 MukB N-terminal HsbA PF12296.8 gi|16081317|ref|NP_393635.1| - 0.053 13.9 2.7 12 6.4 0.0 5.0 6 0 0 6 6 6 0 Hydrophobic surface binding protein A MRFAP1 PF15155.6 gi|16081317|ref|NP_393635.1| - 0.24 11.9 0.1 0.24 11.9 0.1 3.9 3 2 0 3 3 2 0 MORF4 family-associated protein1 DUF1948 PF09185.10 gi|16081317|ref|NP_393635.1| - 0.59 10.0 9.6 0.98 9.3 0.9 3.1 3 0 0 3 3 2 0 Domain of unknown function (DUF1948) NPV_P10 PF05531.12 gi|16081317|ref|NP_393635.1| - 2.8 8.5 31.1 7.5 7.1 0.6 8.5 5 2 3 8 8 8 0 Nucleopolyhedrovirus P10 protein DUF948 PF06103.11 gi|16081317|ref|NP_393635.1| - 3.6 7.9 16.6 36 4.7 0.0 6.8 6 2 0 7 7 7 0 Bacterial protein of unknown function (DUF948) Metallophos PF00149.28 gi|16081318|ref|NP_393636.1| - 1.3e-12 48.6 1.1 2.3e-12 47.8 1.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|16081318|ref|NP_393636.1| - 1.4e-08 35.1 0.0 2.2e-08 34.5 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Blt1_C PF17183.4 gi|16081318|ref|NP_393636.1| - 0.049 13.2 0.3 0.21 11.2 0.0 2.2 2 0 0 2 2 2 0 Get5 carboxyl domain DUF87 PF01935.17 gi|16081319|ref|NP_393637.1| - 2.9e-37 129.0 0.3 6.6e-37 127.8 0.3 1.6 1 0 0 1 1 1 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|16081319|ref|NP_393637.1| - 4.6e-08 33.1 1.4 1.1e-07 31.9 0.3 2.3 2 0 0 2 2 2 1 HAS barrel domain DUF853 PF05872.12 gi|16081319|ref|NP_393637.1| - 2.8e-07 29.5 0.0 0.00028 19.6 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) T4SS-DNA_transf PF02534.14 gi|16081319|ref|NP_393637.1| - 1.2e-05 24.3 0.0 1.9e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer TrwB_AAD_bind PF10412.9 gi|16081319|ref|NP_393637.1| - 3.5e-05 22.9 0.0 0.0027 16.7 0.0 2.5 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|16081319|ref|NP_393637.1| - 0.0019 18.5 0.0 0.48 10.7 0.1 2.7 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 gi|16081319|ref|NP_393637.1| - 0.0034 17.4 0.3 0.014 15.4 0.2 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_10 PF12846.7 gi|16081319|ref|NP_393637.1| - 0.013 14.4 0.0 0.044 12.7 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain FtsK_SpoIIIE PF01580.18 gi|16081319|ref|NP_393637.1| - 0.038 13.3 0.0 2.4 7.4 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family Helicase_RecD PF05127.14 gi|16081319|ref|NP_393637.1| - 0.086 12.7 0.1 0.17 11.8 0.1 1.6 1 1 0 1 1 1 0 Helicase NurA PF09376.10 gi|16081320|ref|NP_393638.1| - 5.6e-28 98.3 0.1 6.9e-28 98.0 0.1 1.1 1 0 0 1 1 1 1 NurA domain NAD_binding_2 PF03446.15 gi|16081321|ref|NP_393639.1| - 3.1e-31 108.7 2.2 3.1e-31 108.7 2.2 1.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|16081321|ref|NP_393639.1| - 1.1e-24 86.9 0.0 2.9e-24 85.6 0.0 1.7 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Shikimate_DH PF01488.20 gi|16081321|ref|NP_393639.1| - 5.2e-07 29.8 0.1 1.2e-06 28.6 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|16081321|ref|NP_393639.1| - 8.1e-07 29.5 0.1 2.1e-06 28.2 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|16081321|ref|NP_393639.1| - 2e-05 24.6 1.0 0.00068 19.6 0.2 2.3 1 1 1 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|16081321|ref|NP_393639.1| - 4.7e-05 22.8 0.1 7.6e-05 22.1 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|16081321|ref|NP_393639.1| - 0.00012 22.5 0.1 0.0078 16.6 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_C PF03720.15 gi|16081321|ref|NP_393639.1| - 0.00049 20.5 0.0 0.0016 18.8 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFO_IDH_MocA PF01408.22 gi|16081321|ref|NP_393639.1| - 0.0014 19.4 0.0 0.0028 18.5 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.12 gi|16081321|ref|NP_393639.1| - 0.0034 17.0 0.2 0.0063 16.1 0.2 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 gi|16081321|ref|NP_393639.1| - 0.056 13.4 0.8 0.23 11.4 0.8 1.9 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ribosomal_L18p PF00861.22 gi|16081321|ref|NP_393639.1| - 0.12 12.7 0.2 0.44 10.9 0.0 1.9 2 0 0 2 2 2 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HD_2 PF12917.7 gi|16081321|ref|NP_393639.1| - 0.16 11.7 0.0 0.32 10.7 0.0 1.4 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme Oxidored_FMN PF00724.20 gi|16082491|ref|NP_393640.1| - 3.6e-70 236.9 0.0 6.5e-70 236.1 0.0 1.4 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family NAD_binding_8 PF13450.6 gi|16082491|ref|NP_393640.1| - 1.3e-08 34.9 0.2 1.2e-07 31.8 0.1 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|16082491|ref|NP_393640.1| - 1.3e-06 28.1 0.1 2e-06 27.5 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|16082491|ref|NP_393640.1| - 9.5e-06 24.9 0.4 1.8e-05 24.0 0.4 1.4 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|16082491|ref|NP_393640.1| - 1.1e-05 24.7 0.0 1.6e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|16082491|ref|NP_393640.1| - 4.3e-05 22.9 0.3 8.4e-05 21.9 0.3 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|16082491|ref|NP_393640.1| - 4.8e-05 22.7 0.1 0.00012 21.4 0.0 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082491|ref|NP_393640.1| - 0.00012 22.5 0.4 0.00098 19.6 0.4 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|16082491|ref|NP_393640.1| - 0.00036 19.9 0.0 0.00067 19.0 0.0 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|16082491|ref|NP_393640.1| - 0.00058 19.6 0.2 0.0012 18.5 0.1 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|16082491|ref|NP_393640.1| - 0.0013 17.6 0.6 0.0021 16.9 0.6 1.3 1 0 0 1 1 1 1 HI0933-like protein Dus PF01207.17 gi|16082491|ref|NP_393640.1| - 0.002 17.3 0.0 0.008 15.3 0.0 2.0 2 1 0 2 2 2 1 Dihydrouridine synthase (Dus) Amino_oxidase PF01593.24 gi|16082491|ref|NP_393640.1| - 0.038 13.3 0.0 0.072 12.4 0.0 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 gi|16082491|ref|NP_393640.1| - 0.038 13.2 1.4 0.31 10.3 0.3 2.4 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|16082491|ref|NP_393640.1| - 0.16 11.8 0.1 0.39 10.6 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EI24 PF07264.11 gi|16082637|ref|NP_393641.1| - 3.3 7.9 28.6 0.13 12.5 15.5 2.0 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) Phage_holin_3_1 PF05106.12 gi|16082637|ref|NP_393641.1| - 7.8 7.0 12.3 2.5 8.6 5.5 2.1 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) DUF2070 PF09843.9 gi|16082637|ref|NP_393641.1| - 8.8 4.5 23.2 11 4.2 23.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) UPF0547 PF10571.9 gi|16081322|ref|NP_393642.1| - 9.5e-06 25.6 5.0 1.6e-05 24.9 5.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|16081322|ref|NP_393642.1| - 0.00018 20.8 3.0 0.00028 20.2 3.0 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|16081322|ref|NP_393642.1| - 0.00034 20.2 4.2 0.00048 19.8 4.2 1.2 1 0 0 1 1 1 1 zinc-ribbon domain SpoIIM PF01944.17 gi|16081322|ref|NP_393642.1| - 0.00051 20.1 13.2 0.00051 20.1 13.2 2.2 2 1 0 2 2 2 1 Stage II sporulation protein M DZR PF12773.7 gi|16081322|ref|NP_393642.1| - 0.00092 19.2 0.4 0.0014 18.6 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon RNA_POL_M_15KD PF02150.16 gi|16081322|ref|NP_393642.1| - 0.0054 16.6 1.6 0.0084 16.0 1.6 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit Zn-C2H2_12 PF18112.1 gi|16081322|ref|NP_393642.1| - 0.027 14.9 2.6 0.054 14.0 0.2 2.4 1 1 1 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-WRNIP1_ubi PF18279.1 gi|16081322|ref|NP_393642.1| - 0.028 15.0 1.7 4 8.3 0.1 2.4 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain DUF4349 PF14257.6 gi|16081322|ref|NP_393642.1| - 0.2 11.1 2.2 0.38 10.2 2.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) zinc_ribbon_15 PF17032.5 gi|16081322|ref|NP_393642.1| - 0.23 12.2 1.3 0.46 11.3 1.3 1.5 1 0 0 1 1 1 0 zinc-ribbon family RecR PF02132.15 gi|16081322|ref|NP_393642.1| - 0.43 10.2 1.6 0.79 9.3 1.6 1.3 1 0 0 1 1 1 0 RecR protein DUF3797 PF12677.7 gi|16081322|ref|NP_393642.1| - 0.46 10.4 1.9 6.1 6.8 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) DUF983 PF06170.12 gi|16081322|ref|NP_393642.1| - 0.51 10.8 0.0 0.51 10.8 0.0 4.3 3 1 2 5 5 5 0 Protein of unknown function (DUF983) zf-NADH-PPase PF09297.11 gi|16081322|ref|NP_393642.1| - 0.57 9.9 3.3 9.4 6.0 0.3 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF3671 PF12420.8 gi|16081322|ref|NP_393642.1| - 0.86 9.7 6.3 11 6.1 5.4 2.7 2 1 0 2 2 2 0 Protein of unknown function DUF872 PF05915.12 gi|16081322|ref|NP_393642.1| - 1.6 9.0 6.1 66 3.7 0.5 3.2 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) zf-C2HC_2 PF13913.6 gi|16081322|ref|NP_393642.1| - 4.2 7.4 5.0 8.4 6.4 0.3 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF4242 PF14026.6 gi|16081323|ref|NP_393643.1| - 0.062 13.5 0.0 0.072 13.3 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4242) HTH_10 PF04967.12 gi|16081324|ref|NP_393644.1| - 6.1e-23 80.4 0.6 1.4e-22 79.2 0.1 1.8 2 0 0 2 2 2 1 HTH DNA binding domain Mga PF05043.13 gi|16081324|ref|NP_393644.1| - 0.00014 22.3 0.0 0.00026 21.5 0.0 1.5 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_psq PF05225.16 gi|16081324|ref|NP_393644.1| - 0.0031 17.2 0.0 0.0087 15.8 0.0 1.8 1 0 0 1 1 1 1 helix-turn-helix, Psq domain DUF5601 PF18151.1 gi|16081324|ref|NP_393644.1| - 0.0084 16.4 0.0 0.15 12.4 0.0 2.7 1 1 0 1 1 1 1 Domain of unknown function (DUF5601) DUF2089 PF09862.9 gi|16081324|ref|NP_393644.1| - 0.009 16.0 0.0 0.023 14.7 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2089) MerR PF00376.23 gi|16081324|ref|NP_393644.1| - 0.046 13.5 0.0 0.28 11.0 0.0 2.2 2 0 0 2 2 2 0 MerR family regulatory protein UPF0122 PF04297.14 gi|16081324|ref|NP_393644.1| - 0.074 13.3 0.3 0.37 11.1 0.1 2.1 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like Hom_end_hint PF05203.16 gi|16081324|ref|NP_393644.1| - 0.15 12.0 0.2 0.54 10.2 0.1 1.8 1 1 1 2 2 2 0 Hom_end-associated Hint Thermopsin PF05317.11 gi|16081325|ref|NP_393645.1| - 9.9e-80 267.7 10.2 9.9e-80 267.7 10.2 3.1 2 1 1 3 3 3 1 Thermopsin Citrate_synt PF00285.21 gi|16081327|ref|NP_393647.1| - 7e-102 341.2 0.0 8e-102 341.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain ArsB PF02040.15 gi|16082492|ref|NP_393648.1| - 9.8e-105 351.3 34.2 1.2e-104 351.0 34.2 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 gi|16082492|ref|NP_393648.1| - 1e-22 80.7 34.8 1e-22 80.7 34.8 2.0 1 1 1 2 2 2 1 Citrate transporter Fzo_mitofusin PF04799.13 gi|16082492|ref|NP_393648.1| - 0.11 12.0 0.2 0.26 10.8 0.2 1.5 1 0 0 1 1 1 0 fzo-like conserved region DPM3 PF08285.11 gi|16082492|ref|NP_393648.1| - 1.2 9.3 14.9 1.2 9.4 1.3 3.8 3 1 0 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Peripla_BP_2 PF01497.18 gi|16081328|ref|NP_393649.1| - 3.9e-30 105.2 0.1 4.9e-30 104.8 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Bac_rhodopsin PF01036.18 gi|16081328|ref|NP_393649.1| - 0.062 12.9 0.2 0.1 12.2 0.2 1.4 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein FecCD PF01032.18 gi|16081329|ref|NP_393650.1| - 2.5e-84 282.9 29.5 3e-84 282.7 29.5 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|16081329|ref|NP_393650.1| - 0.00026 20.6 22.9 0.00026 20.6 22.9 2.5 2 1 0 2 2 2 1 ABC 3 transport family DUF3307 PF11750.8 gi|16081330|ref|NP_393651.1| - 0.0018 18.3 1.7 0.0018 18.3 1.7 2.3 2 1 1 3 3 3 1 Protein of unknown function (DUF3307) VitK2_biosynth PF02621.14 gi|16081331|ref|NP_393652.1| - 2e-77 260.3 0.1 2.3e-77 260.1 0.1 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis NMT1 PF09084.11 gi|16081331|ref|NP_393652.1| - 0.0028 17.6 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 NMT1/THI5 like YhfZ_C PF14503.6 gi|16081331|ref|NP_393652.1| - 0.012 15.2 0.0 0.022 14.3 0.0 1.5 1 1 0 1 1 1 0 YhfZ C-terminal domain Hydrolase_3 PF08282.12 gi|16081332|ref|NP_393653.1| - 3e-27 96.0 0.1 1.9e-15 57.3 0.0 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|16081332|ref|NP_393653.1| - 5e-10 40.1 0.9 0.00017 22.1 0.0 3.4 1 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|16081332|ref|NP_393653.1| - 5.1e-06 26.2 0.0 2.9e-05 23.7 0.0 1.9 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|16081332|ref|NP_393653.1| - 8.3e-05 23.0 0.3 0.11 12.8 0.3 2.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase MobB PF03205.14 gi|16081332|ref|NP_393653.1| - 0.014 15.3 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Hydrolase_6 PF13344.6 gi|16081332|ref|NP_393653.1| - 0.016 15.3 0.0 0.21 11.7 0.0 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|16081332|ref|NP_393653.1| - 0.02 15.0 0.1 9.9 6.2 0.0 3.0 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase Rpr2 PF04032.16 gi|16082493|ref|NP_393654.1| - 2.2e-06 27.9 1.8 4.4e-06 26.9 1.9 1.6 1 1 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain zinc_ribbon_4 PF13717.6 gi|16082493|ref|NP_393654.1| - 0.004 17.1 4.7 0.0082 16.1 4.7 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|16082493|ref|NP_393654.1| - 0.043 13.6 3.3 0.065 13.0 3.3 1.2 1 0 0 1 1 1 0 zinc-ribbon domain CxC5 PF18718.1 gi|16082493|ref|NP_393654.1| - 0.12 12.5 1.6 0.18 11.9 0.7 1.7 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases Pox_D5 PF03288.16 gi|16081334|ref|NP_393656.1| - 0.091 13.3 0.0 13 6.3 0.0 2.3 1 1 1 2 2 2 0 Poxvirus D5 protein-like AAA_17 PF13207.6 gi|16081335|ref|NP_393657.1| - 5.7e-10 39.7 0.0 8.3e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|16081335|ref|NP_393657.1| - 4.7e-09 36.9 0.0 6.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain Ammonium_transp PF00909.21 gi|16082494|ref|NP_393658.1| - 2.9e-57 194.2 23.2 3.7e-57 193.8 23.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3087 PF11286.8 gi|16082494|ref|NP_393658.1| - 0.11 11.9 7.4 0.059 12.8 1.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3087) DUF1691 PF07950.11 gi|16082494|ref|NP_393658.1| - 0.41 11.4 3.6 0.87 10.3 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1691) PTP_tm PF18861.1 gi|16082494|ref|NP_393658.1| - 2.8 7.9 9.6 1.3 9.0 0.3 3.1 2 1 1 3 3 3 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J YbjQ_1 PF01906.17 gi|16081336|ref|NP_393660.1| - 2.4e-37 127.7 2.1 3e-37 127.4 2.1 1.1 1 0 0 1 1 1 1 Putative heavy-metal-binding MMR_HSR1_Xtn PF16897.5 gi|16081336|ref|NP_393660.1| - 0.13 12.2 0.4 0.99 9.4 0.0 2.1 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain DUF4156 PF13698.6 gi|16081336|ref|NP_393660.1| - 0.18 12.1 0.5 0.89 9.9 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4156) Neurensin PF14927.6 gi|16081337|ref|NP_393661.1| - 0.085 12.6 1.1 0.67 9.7 0.4 2.2 2 0 0 2 2 2 0 Neurensin UbiD PF01977.16 gi|16081338|ref|NP_393662.1| - 1.5e-64 218.4 0.0 1.9e-62 211.5 0.0 2.0 2 0 0 2 2 2 2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HTH_24 PF13412.6 gi|16081339|ref|NP_393663.1| - 4.1e-08 32.6 0.7 6.9e-08 31.9 0.7 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|16081339|ref|NP_393663.1| - 1.7e-06 27.8 0.1 3.4e-06 26.8 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|16081339|ref|NP_393663.1| - 3.7e-06 26.8 0.6 7.3e-06 25.8 0.6 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|16081339|ref|NP_393663.1| - 4.6e-06 26.4 0.2 8.4e-06 25.6 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|16081339|ref|NP_393663.1| - 1e-05 25.5 0.0 1.6e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|16081339|ref|NP_393663.1| - 0.00024 20.9 1.2 0.00024 20.9 1.2 2.1 2 1 1 3 3 3 1 TFIIE alpha subunit MarR_2 PF12802.7 gi|16081339|ref|NP_393663.1| - 0.00042 20.1 0.0 0.00074 19.4 0.0 1.4 1 0 0 1 1 1 1 MarR family PadR PF03551.14 gi|16081339|ref|NP_393663.1| - 0.0019 18.1 0.2 0.0036 17.2 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_Crp_2 PF13545.6 gi|16081339|ref|NP_393663.1| - 0.0032 17.4 0.3 0.018 15.0 0.1 2.1 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_7 PF02796.15 gi|16081339|ref|NP_393663.1| - 0.017 15.2 0.1 0.04 14.0 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_11 PF08279.12 gi|16081339|ref|NP_393663.1| - 0.042 13.8 0.5 0.076 13.0 0.5 1.4 1 0 0 1 1 1 0 HTH domain HTH_34 PF13601.6 gi|16081339|ref|NP_393663.1| - 0.063 13.5 1.0 0.11 12.7 0.2 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|16081339|ref|NP_393663.1| - 0.12 12.8 0.1 0.31 11.4 0.1 1.8 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|16081339|ref|NP_393663.1| - 0.12 12.2 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain TTRAP PF14203.6 gi|16081339|ref|NP_393663.1| - 0.92 9.5 4.4 2.1 8.4 0.4 3.1 3 1 0 3 3 3 0 Putative tranposon-transfer assisting protein MFS_1 PF07690.16 gi|16081340|ref|NP_393664.1| - 7.9e-17 61.2 41.6 7.9e-17 61.2 41.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|16081340|ref|NP_393664.1| - 1.9e-05 23.3 32.5 2.4e-05 23.0 32.5 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector CutA1 PF03091.15 gi|16081341|ref|NP_393665.1| - 1.6e-10 40.7 0.1 1.7e-10 40.6 0.1 1.1 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein Transposase_mut PF00872.18 gi|16081343|ref|NP_393667.1| - 0.0023 16.9 0.0 0.0026 16.7 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family adh_short_C2 PF13561.6 gi|16081345|ref|NP_393669.1| - 4.1e-68 229.4 0.1 5.2e-68 229.1 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081345|ref|NP_393669.1| - 3.2e-59 199.7 0.0 4e-59 199.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081345|ref|NP_393669.1| - 2e-13 50.7 0.0 4.3e-13 49.6 0.0 1.5 2 0 0 2 2 2 1 KR domain Epimerase PF01370.21 gi|16081345|ref|NP_393669.1| - 0.0053 16.3 0.1 0.0081 15.6 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1776 PF08643.10 gi|16081345|ref|NP_393669.1| - 0.013 14.9 0.0 0.019 14.3 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) THF_DHG_CYH_C PF02882.19 gi|16081345|ref|NP_393669.1| - 0.059 12.7 0.2 0.2 11.0 0.0 1.9 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MutL PF13941.6 gi|16081345|ref|NP_393669.1| - 0.078 11.6 0.0 0.15 10.6 0.0 1.4 1 0 0 1 1 1 0 MutL protein DUF5403 PF17395.2 gi|16081345|ref|NP_393669.1| - 0.094 13.0 0.1 0.89 9.9 0.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5403) Methyltransf_25 PF13649.6 gi|16082495|ref|NP_393670.1| - 1e-15 58.2 0.0 1.9e-15 57.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16082495|ref|NP_393670.1| - 2.2e-14 54.0 0.0 3.1e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16082495|ref|NP_393670.1| - 1.3e-12 47.8 0.0 1.5e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16082495|ref|NP_393670.1| - 1.9e-11 44.4 0.0 2.9e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16082495|ref|NP_393670.1| - 4.2e-10 39.7 0.0 5.2e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|16082495|ref|NP_393670.1| - 4.5e-07 29.5 0.0 5.6e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|16082495|ref|NP_393670.1| - 8.6e-06 25.4 0.0 1.2e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|16082495|ref|NP_393670.1| - 5.1e-05 22.8 0.0 7.6e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 gi|16082495|ref|NP_393670.1| - 0.0019 17.5 0.0 0.0022 17.3 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_5 PF01795.19 gi|16082495|ref|NP_393670.1| - 0.014 14.9 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Methyltransf_9 PF08003.11 gi|16082495|ref|NP_393670.1| - 0.02 13.8 0.0 0.027 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) DUF938 PF06080.12 gi|16082495|ref|NP_393670.1| - 0.041 13.7 0.0 0.2 11.4 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Rsm22 PF09243.10 gi|16082495|ref|NP_393670.1| - 0.17 11.1 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 HD PF01966.22 gi|16082496|ref|NP_393671.1| - 2.4e-14 53.6 0.6 1.2e-13 51.3 0.4 2.1 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 gi|16082496|ref|NP_393671.1| - 0.015 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 HDOD domain Abhydrolase_1 PF00561.20 gi|16082497|ref|NP_393672.1| - 1.8e-21 76.9 0.2 7.5e-13 48.7 0.2 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|16082497|ref|NP_393672.1| - 2e-17 63.3 0.1 7.9e-14 51.5 0.1 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|16082497|ref|NP_393672.1| - 2.2e-14 54.6 0.0 1.7e-09 38.6 0.0 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 gi|16082497|ref|NP_393672.1| - 6.7e-06 26.1 0.0 1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 gi|16082497|ref|NP_393672.1| - 1.3e-05 25.1 0.1 3.2e-05 23.8 0.0 1.6 2 1 0 2 2 2 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|16082497|ref|NP_393672.1| - 8.6e-05 22.1 0.2 0.0046 16.5 0.3 2.2 1 1 1 2 2 2 1 Prolyl oligopeptidase family Esterase PF00756.20 gi|16082497|ref|NP_393672.1| - 0.00036 20.3 0.0 0.00051 19.8 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Abhydrolase_4 PF08386.10 gi|16082497|ref|NP_393672.1| - 0.00044 20.3 0.0 0.00072 19.6 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein FSH1 PF03959.13 gi|16082497|ref|NP_393672.1| - 0.00045 19.9 0.1 0.0035 17.0 0.1 2.0 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_3 PF07859.13 gi|16082497|ref|NP_393672.1| - 0.014 15.3 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold DLH PF01738.18 gi|16082497|ref|NP_393672.1| - 0.016 14.8 0.0 0.022 14.3 0.0 1.4 1 1 0 1 1 1 0 Dienelactone hydrolase family Tannase PF07519.11 gi|16082497|ref|NP_393672.1| - 0.019 13.9 0.0 0.023 13.6 0.0 1.2 1 0 0 1 1 1 0 Tannase and feruloyl esterase Peptidase_S28 PF05577.12 gi|16082497|ref|NP_393672.1| - 0.03 13.1 0.0 0.044 12.6 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 Ndr PF03096.14 gi|16082497|ref|NP_393672.1| - 0.13 11.0 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 Ndr family OsmC PF02566.19 gi|16081346|ref|NP_393673.1| - 1.6e-16 60.6 0.0 2.5e-16 60.0 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein Ank_2 PF12796.7 gi|16081347|ref|NP_393674.1| - 5.7e-35 119.8 0.1 1.5e-12 47.9 0.0 2.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 gi|16081347|ref|NP_393674.1| - 7.5e-30 102.9 1.6 9.3e-14 51.6 0.0 4.6 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 gi|16081347|ref|NP_393674.1| - 2.8e-24 84.9 2.1 2e-08 34.3 0.0 4.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 gi|16081347|ref|NP_393674.1| - 1.1e-18 65.3 0.4 0.0036 17.7 0.0 4.5 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 gi|16081347|ref|NP_393674.1| - 1.3e-17 63.4 0.0 0.00018 21.8 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat MFS_1 PF07690.16 gi|16081348|ref|NP_393675.1| - 1.7e-35 122.6 79.4 1.8e-28 99.5 44.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1290 PF06947.12 gi|16081348|ref|NP_393675.1| - 0.027 14.6 1.6 0.027 14.6 1.6 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF1290) CCG PF02754.16 gi|16082498|ref|NP_393676.1| - 4.7e-30 103.6 5.7 3.8e-16 59.1 0.1 2.7 3 0 0 3 3 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|16082498|ref|NP_393676.1| - 4.4e-11 43.1 5.9 4.4e-11 43.1 5.9 2.1 3 0 0 3 3 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082498|ref|NP_393676.1| - 9.5e-10 38.5 7.3 9.5e-10 38.5 7.3 2.6 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082498|ref|NP_393676.1| - 1.5e-08 34.6 8.9 1.5e-08 34.6 8.9 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16082498|ref|NP_393676.1| - 8.7e-07 29.4 8.2 8.7e-07 29.4 8.2 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Nitrate_red_gam PF02665.14 gi|16082498|ref|NP_393676.1| - 1.1e-06 28.3 6.7 2e-06 27.5 6.7 1.4 1 0 0 1 1 1 1 Nitrate reductase gamma subunit Fer4_16 PF13484.6 gi|16082498|ref|NP_393676.1| - 5.9e-06 27.1 7.0 5.9e-06 27.1 7.0 2.2 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|16082498|ref|NP_393676.1| - 1.6e-05 25.3 20.7 3.9e-05 24.1 9.8 3.1 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16082498|ref|NP_393676.1| - 0.0018 18.3 5.4 0.0018 18.3 5.4 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|16082498|ref|NP_393676.1| - 0.0034 17.8 1.8 0.0034 17.8 1.8 3.5 5 0 0 5 5 3 2 4Fe-4S binding domain Fer4 PF00037.27 gi|16082498|ref|NP_393676.1| - 0.018 14.9 5.0 0.018 14.9 5.0 3.1 4 0 0 4 4 3 0 4Fe-4S binding domain zf-Di19 PF05605.12 gi|16082498|ref|NP_393676.1| - 0.064 13.6 0.6 7.5 6.9 0.0 2.6 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Fer4_13 PF13370.6 gi|16082498|ref|NP_393676.1| - 0.11 13.1 8.2 2.1 9.0 0.3 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|16082498|ref|NP_393676.1| - 0.15 12.9 0.4 0.15 12.9 0.4 3.4 5 0 0 5 5 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|16082498|ref|NP_393676.1| - 1.3 9.8 6.6 8.4 7.2 0.9 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|16082498|ref|NP_393676.1| - 1.7 8.8 15.9 5.6 7.2 12.6 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|16082498|ref|NP_393676.1| - 2.9 8.1 11.8 4.7 7.4 0.5 3.0 2 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|16082498|ref|NP_393676.1| - 4.4 7.1 10.4 0.9 9.3 1.0 2.6 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TBP PF00352.21 gi|16081349|ref|NP_393677.1| - 1.6e-58 194.6 0.1 3.6e-28 97.3 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|16081349|ref|NP_393677.1| - 3.1e-06 27.2 0.0 0.045 13.9 0.0 2.5 2 1 0 2 2 2 2 Domain of unknown function (DUF3378) FeS_assembly_P PF01883.19 gi|16081350|ref|NP_393678.1| - 1.6e-23 82.7 0.1 2.1e-23 82.3 0.1 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein HTH_5 PF01022.20 gi|16081351|ref|NP_393679.1| - 2.2e-07 30.6 0.1 4.7e-07 29.6 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|16081351|ref|NP_393679.1| - 1.7e-05 24.7 0.0 3.7e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|16081351|ref|NP_393679.1| - 0.0001 22.4 0.0 0.00018 21.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|16081351|ref|NP_393679.1| - 0.0017 18.2 0.0 0.0031 17.4 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|16081351|ref|NP_393679.1| - 0.0019 18.7 0.0 0.0041 17.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|16081351|ref|NP_393679.1| - 0.0025 17.6 0.8 0.0094 15.7 0.0 2.3 2 1 1 3 3 3 1 HTH DNA binding domain MetOD1 PF18546.1 gi|16081351|ref|NP_393679.1| - 0.0026 17.7 0.1 0.0041 17.1 0.1 1.3 1 0 0 1 1 1 1 Metanogen output domain 1 Fe_dep_repress PF01325.19 gi|16081351|ref|NP_393679.1| - 0.0048 17.1 0.1 0.016 15.3 0.0 1.9 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DprA_WH PF17782.1 gi|16081351|ref|NP_393679.1| - 0.0094 16.0 0.0 0.019 15.1 0.0 1.4 1 0 0 1 1 1 1 DprA winged helix domain HTH_24 PF13412.6 gi|16081351|ref|NP_393679.1| - 0.012 15.2 0.0 0.028 14.0 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|16081351|ref|NP_393679.1| - 0.012 15.4 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|16081351|ref|NP_393679.1| - 0.013 15.4 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|16081351|ref|NP_393679.1| - 0.019 14.9 0.1 0.051 13.5 0.1 1.8 1 0 0 1 1 1 0 HTH domain MarR PF01047.22 gi|16081351|ref|NP_393679.1| - 0.089 12.7 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|16081351|ref|NP_393679.1| - 0.1 12.6 1.0 0.34 10.9 0.1 2.4 3 0 0 3 3 3 0 Winged helix-turn-helix HTH_36 PF13730.6 gi|16081351|ref|NP_393679.1| - 0.1 12.6 0.1 0.77 9.8 0.0 2.5 3 1 0 3 3 3 0 Helix-turn-helix domain HxlR PF01638.17 gi|16081351|ref|NP_393679.1| - 0.14 12.1 0.0 0.37 10.7 0.0 1.8 1 1 1 2 2 2 0 HxlR-like helix-turn-helix ABC_tran PF00005.27 gi|16081352|ref|NP_393680.1| - 2.4e-25 89.6 0.0 4e-25 88.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|16081352|ref|NP_393680.1| - 9.9e-08 31.7 0.7 0.00016 21.2 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|16081352|ref|NP_393680.1| - 2.5e-07 30.8 0.3 0.0074 16.1 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|16081352|ref|NP_393680.1| - 4.4e-05 23.4 0.1 9e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|16081352|ref|NP_393680.1| - 0.0055 16.4 0.1 0.012 15.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|16081352|ref|NP_393680.1| - 0.037 14.5 0.7 0.64 10.5 0.7 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|16081352|ref|NP_393680.1| - 0.066 13.5 0.6 1.6 9.0 0.6 2.2 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|16081352|ref|NP_393680.1| - 0.067 13.7 0.1 0.18 12.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|16081352|ref|NP_393680.1| - 0.12 11.9 0.1 0.22 11.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain UPF0051 PF01458.17 gi|16081353|ref|NP_393681.1| - 2.9e-64 216.7 0.1 3.8e-64 216.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.17 gi|16081354|ref|NP_393682.1| - 6.4e-48 163.3 0.4 8.2e-48 163.0 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Toxin-JAB1 PF15659.6 gi|16081354|ref|NP_393682.1| - 0.026 14.8 0.1 0.056 13.8 0.1 1.6 1 0 0 1 1 1 0 JAB-like toxin 1 adh_short_C2 PF13561.6 gi|16081355|ref|NP_393683.1| - 9.7e-49 166.0 0.0 1.3e-48 165.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081355|ref|NP_393683.1| - 1e-39 136.0 0.0 1.6e-39 135.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081355|ref|NP_393683.1| - 3.9e-07 30.2 0.0 8e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 KR domain HGTP_anticodon PF03129.20 gi|16081356|ref|NP_393684.1| - 4e-19 68.6 0.1 1.5e-18 66.8 0.1 1.9 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|16081356|ref|NP_393684.1| - 2.7e-08 34.0 0.0 3.3e-07 30.5 0.0 2.3 3 0 0 3 3 3 1 tRNA synthetase class II core domain (G, H, P, S and T) zinc_ribbon_2 PF13240.6 gi|16081356|ref|NP_393684.1| - 0.00034 20.2 2.6 0.19 11.5 0.3 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|16081356|ref|NP_393684.1| - 0.00067 19.0 1.1 0.18 11.2 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain Mu-like_Com PF10122.9 gi|16081356|ref|NP_393684.1| - 0.0034 16.8 0.2 2.5 7.6 0.0 2.5 2 0 0 2 2 2 2 Mu-like prophage protein Com Prok-RING_1 PF14446.6 gi|16081356|ref|NP_393684.1| - 0.0045 16.9 1.0 0.9 9.5 0.0 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zinc_ribbon_4 PF13717.6 gi|16081356|ref|NP_393684.1| - 0.0054 16.6 0.5 3.4 7.7 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|16081356|ref|NP_393684.1| - 0.033 14.2 0.0 0.067 13.2 0.0 1.5 1 1 0 1 1 1 0 Double zinc ribbon CpXC PF14353.6 gi|16081356|ref|NP_393684.1| - 0.06 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 CpXC protein zf-C2H2 PF00096.26 gi|16081356|ref|NP_393684.1| - 0.16 12.5 3.6 5.2 7.7 0.2 3.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type MLANA PF14991.6 gi|16081356|ref|NP_393684.1| - 0.17 12.2 0.0 1.1 9.6 0.0 2.0 2 0 0 2 2 2 0 Protein melan-A zf-HIT PF04438.16 gi|16081356|ref|NP_393684.1| - 0.22 11.4 3.3 7.3 6.6 0.3 2.3 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_5 PF13719.6 gi|16081356|ref|NP_393684.1| - 0.36 10.6 1.6 15 5.5 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16081356|ref|NP_393684.1| - 0.51 10.5 2.5 6.9 6.9 2.7 2.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-ACC PF17848.1 gi|16081356|ref|NP_393684.1| - 1.1 9.4 4.5 4.7 7.4 0.8 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain CBS PF00571.28 gi|16081357|ref|NP_393685.1| - 7.1e-32 109.6 5.1 5.2e-10 39.6 0.1 4.1 4 0 0 4 4 4 4 CBS domain NleF_casp_inhib PF16809.5 gi|16081357|ref|NP_393685.1| - 0.0062 16.5 0.1 0.013 15.4 0.1 1.5 1 0 0 1 1 1 1 NleF caspase inhibitor Pyr_redox_2 PF07992.14 gi|16081358|ref|NP_393686.1| - 2.5e-52 177.9 0.4 7.6e-52 176.4 0.2 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|16081358|ref|NP_393686.1| - 3.4e-18 65.9 0.1 8.8e-18 64.6 0.1 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|16081358|ref|NP_393686.1| - 6.8e-14 52.2 6.1 7.4e-14 52.1 0.0 3.5 4 0 0 4 4 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|16081358|ref|NP_393686.1| - 3.6e-09 36.3 0.5 1.4e-07 31.1 0.1 2.6 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|16081358|ref|NP_393686.1| - 3.7e-09 36.2 6.0 9.5e-05 21.6 0.9 3.6 3 1 0 3 3 3 3 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|16081358|ref|NP_393686.1| - 4.1e-08 33.3 0.5 0.0076 16.5 0.1 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|16081358|ref|NP_393686.1| - 8.8e-07 28.5 1.3 0.0095 15.2 0.2 3.2 4 0 0 4 4 4 2 FAD binding domain K_oxygenase PF13434.6 gi|16081358|ref|NP_393686.1| - 1.9e-06 27.3 0.0 0.02 14.1 0.0 3.1 2 1 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|16081358|ref|NP_393686.1| - 1.4e-05 24.4 4.6 0.00068 18.8 0.1 3.5 2 2 2 4 4 4 1 FAD binding domain Thi4 PF01946.17 gi|16081358|ref|NP_393686.1| - 2.9e-05 23.4 0.8 0.0019 17.5 0.1 2.3 2 0 0 2 2 2 1 Thi4 family UDPG_MGDP_dh_N PF03721.14 gi|16081358|ref|NP_393686.1| - 0.00012 21.7 0.6 0.00066 19.3 0.1 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 gi|16081358|ref|NP_393686.1| - 0.0004 19.7 0.5 0.0079 15.5 0.0 2.6 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|16081358|ref|NP_393686.1| - 0.0007 19.3 1.0 0.11 12.1 0.3 3.6 4 0 0 4 4 4 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|16081358|ref|NP_393686.1| - 0.0031 16.3 5.0 0.37 9.4 0.1 3.4 4 0 0 4 4 4 2 HI0933-like protein 2-Hacid_dh_C PF02826.19 gi|16081358|ref|NP_393686.1| - 0.0046 16.3 0.1 0.041 13.2 0.0 2.2 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|16081358|ref|NP_393686.1| - 0.0089 15.9 0.3 0.064 13.1 0.1 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XdhC_C PF13478.6 gi|16081358|ref|NP_393686.1| - 0.013 16.0 0.0 2.7 8.5 0.0 3.2 3 0 0 3 3 3 0 XdhC Rossmann domain NAD_binding_7 PF13241.6 gi|16081358|ref|NP_393686.1| - 0.067 13.6 0.1 1.4 9.4 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding FAD_oxidored PF12831.7 gi|16081358|ref|NP_393686.1| - 0.069 12.5 0.8 0.1 11.9 0.0 1.7 2 0 0 2 2 2 0 FAD dependent oxidoreductase PrpR_N PF06506.11 gi|16081358|ref|NP_393686.1| - 0.073 12.6 0.1 0.19 11.3 0.0 1.7 2 0 0 2 2 2 0 Propionate catabolism activator Lycopene_cycl PF05834.12 gi|16081358|ref|NP_393686.1| - 0.38 9.8 1.2 6.4 5.7 0.1 2.3 2 0 0 2 2 2 0 Lycopene cyclase protein DUF21 PF01595.20 gi|16081359|ref|NP_393687.1| - 0.023 14.4 5.2 1 9.1 0.2 2.1 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain ETF PF01012.21 gi|16082499|ref|NP_393689.1| - 2.8e-30 105.6 0.0 3.9e-30 105.1 0.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|16081361|ref|NP_393690.1| - 5.2e-34 116.1 0.2 1.1e-33 115.1 0.2 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|16081361|ref|NP_393690.1| - 3.3e-07 30.4 0.0 4.9e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain DUF4416 PF14385.6 gi|16081361|ref|NP_393690.1| - 0.014 15.3 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4416) Glyco_trans_2_3 PF13632.6 gi|16081362|ref|NP_393691.1| - 9.6e-25 87.7 4.7 2e-24 86.6 4.7 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|16081362|ref|NP_393691.1| - 4.8e-17 62.6 0.0 6.2e-17 62.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Stn1_C PF12659.7 gi|16081362|ref|NP_393691.1| - 0.026 14.5 0.1 0.063 13.2 0.1 1.6 1 0 0 1 1 1 0 Telomere capping C-terminal wHTH Glycos_transf_2 PF00535.26 gi|16081362|ref|NP_393691.1| - 0.081 12.7 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 TruD PF01142.18 gi|16081363|ref|NP_393692.1| - 1.3e-112 376.6 0.1 1.6e-112 376.4 0.1 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Radical_SAM PF04055.21 gi|16081364|ref|NP_393693.1| - 1.8e-21 77.2 0.1 6.6e-21 75.4 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|16081364|ref|NP_393693.1| - 0.00082 19.5 0.0 0.002 18.2 0.0 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|16081364|ref|NP_393693.1| - 0.01 16.1 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain AATase PF07247.12 gi|16081364|ref|NP_393693.1| - 0.013 14.1 0.3 0.053 12.1 0.0 1.8 2 0 0 2 2 2 0 Alcohol acetyltransferase PseudoU_synth_2 PF00849.22 gi|16081364|ref|NP_393693.1| - 0.14 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 RNA pseudouridylate synthase Radical_SAM PF04055.21 gi|16081365|ref|NP_393694.1| - 4.9e-11 43.3 0.0 1e-10 42.3 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|16081365|ref|NP_393694.1| - 4.7e-07 29.9 0.0 1.1e-06 28.6 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain Radical_SAM PF04055.21 gi|16081366|ref|NP_393695.1| - 5.4e-16 59.4 0.1 8e-16 58.9 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_16 PF05301.11 gi|16081366|ref|NP_393695.1| - 0.025 14.3 0.0 0.049 13.4 0.0 1.5 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Fer4_14 PF13394.6 gi|16081366|ref|NP_393695.1| - 0.12 12.5 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|16081366|ref|NP_393695.1| - 0.15 12.3 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain VitK2_biosynth PF02621.14 gi|16081367|ref|NP_393696.1| - 1.8e-20 73.6 0.1 2.1e-20 73.4 0.1 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis IMPDH PF00478.25 gi|16081368|ref|NP_393697.1| - 2.9e-146 486.9 8.1 3.3e-146 486.7 8.1 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|16081368|ref|NP_393697.1| - 2.7e-23 82.1 13.2 8.9e-12 45.3 1.2 4.2 5 0 0 5 5 5 2 CBS domain FMN_dh PF01070.18 gi|16081368|ref|NP_393697.1| - 1.8e-13 50.3 3.5 2.1e-12 46.8 3.2 2.3 2 0 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|16081368|ref|NP_393697.1| - 2.9e-10 40.1 7.7 6.9e-06 25.7 7.8 2.4 2 1 0 2 2 2 2 Nitronate monooxygenase Glu_synthase PF01645.17 gi|16081368|ref|NP_393697.1| - 3.6e-07 29.7 8.2 3.8e-07 29.6 6.3 2.0 2 1 0 2 2 2 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|16081368|ref|NP_393697.1| - 6e-06 25.9 4.6 2.1e-05 24.1 4.6 1.9 1 1 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 gi|16081368|ref|NP_393697.1| - 0.00081 18.8 2.0 0.00081 18.8 2.0 2.6 3 0 0 3 3 3 1 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|16081368|ref|NP_393697.1| - 0.0017 17.5 1.1 0.012 14.8 0.1 2.2 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|16081368|ref|NP_393697.1| - 0.0069 15.6 1.5 0.0069 15.6 1.5 1.9 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase TMP-TENI PF02581.17 gi|16081368|ref|NP_393697.1| - 0.02 14.2 3.0 1.2 8.4 0.6 2.7 1 1 1 2 2 2 0 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|16081368|ref|NP_393697.1| - 0.029 13.8 0.6 0.11 11.9 0.2 2.1 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator EAL PF00563.20 gi|16081368|ref|NP_393697.1| - 0.26 10.8 0.8 1.6 8.2 0.2 2.2 2 0 0 2 2 2 0 EAL domain NanE PF04131.14 gi|16081368|ref|NP_393697.1| - 0.3 10.2 8.3 0.51 9.5 2.2 3.3 2 2 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Aldedh PF00171.22 gi|16081369|ref|NP_393698.1| - 1.1e-17 63.7 0.0 2.3e-14 52.8 0.0 2.7 3 0 0 3 3 3 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 gi|16081369|ref|NP_393698.1| - 0.00012 21.6 0.2 0.00034 20.1 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1487) DUF3658 PF12395.8 gi|16081369|ref|NP_393698.1| - 0.16 11.9 0.0 0.47 10.4 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function EamA PF00892.20 gi|16081370|ref|NP_393699.1| - 5e-35 120.6 42.1 2.9e-18 66.3 17.7 2.0 2 0 0 2 2 2 2 EamA-like transporter family 7TMR-DISM_7TM PF07695.11 gi|16081370|ref|NP_393699.1| - 0.7 9.7 48.8 2.5 8.0 23.0 2.2 1 1 1 2 2 2 0 7TM diverse intracellular signalling DNA_pol_E_B PF04042.16 gi|16081371|ref|NP_393700.1| - 1e-13 51.1 0.0 1.8e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 gi|16081371|ref|NP_393700.1| - 5.9e-12 46.5 0.4 1.1e-11 45.7 0.4 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|16081371|ref|NP_393700.1| - 1.4e-08 35.1 0.0 2.9e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|16081371|ref|NP_393700.1| - 0.006 16.5 0.9 0.014 15.4 0.9 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF3387 PF11867.8 gi|16082639|ref|NP_393701.1| - 0.0044 16.5 5.5 0.0044 16.5 5.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3387) RNase_J_C PF17770.1 gi|16082639|ref|NP_393701.1| - 0.0061 17.6 5.1 0.034 15.2 1.5 2.4 2 1 0 2 2 2 1 Ribonuclease J C-terminal domain DLP_helical PF18709.1 gi|16082639|ref|NP_393701.1| - 0.0078 15.5 1.6 0.0095 15.2 1.6 1.3 1 1 0 1 1 1 1 Dynamin-like helical domain A_thal_3526 PF09713.10 gi|16082639|ref|NP_393701.1| - 0.011 16.0 1.3 0.017 15.4 0.4 1.8 2 0 0 2 2 2 0 Plant protein 1589 of unknown function (A_thal_3526) EnY2 PF10163.9 gi|16082639|ref|NP_393701.1| - 0.012 16.0 1.8 0.24 11.8 1.8 2.3 1 1 0 1 1 1 0 Transcription factor e(y)2 MGDG_synth PF06925.11 gi|16082639|ref|NP_393701.1| - 0.016 15.3 1.0 0.018 15.1 1.0 1.2 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase REC1 PF18501.1 gi|16082639|ref|NP_393701.1| - 0.024 14.6 3.4 0.034 14.0 3.4 1.3 1 0 0 1 1 1 0 Alpha helical recognition lobe domain DUF445 PF04286.12 gi|16082639|ref|NP_393701.1| - 0.028 14.2 2.1 0.029 14.2 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF1722 PF08349.11 gi|16082639|ref|NP_393701.1| - 0.029 14.6 2.7 0.11 12.8 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1722) DUF3232 PF11554.8 gi|16082639|ref|NP_393701.1| - 0.033 14.6 3.8 0.087 13.2 3.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3232) DUF1160 PF06648.11 gi|16082639|ref|NP_393701.1| - 0.035 14.1 4.5 0.055 13.5 3.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1160) NAAA-beta PF15508.6 gi|16082639|ref|NP_393701.1| - 0.053 13.8 1.3 14 6.0 0.0 3.3 3 1 0 3 3 3 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase SRP54_N PF02881.19 gi|16082639|ref|NP_393701.1| - 0.054 13.7 1.9 0.054 13.7 1.9 1.9 2 1 0 2 2 2 0 SRP54-type protein, helical bundle domain DUF5388 PF17363.2 gi|16082639|ref|NP_393701.1| - 0.055 13.7 1.5 0.16 12.2 0.5 2.2 2 1 1 3 3 3 0 Family of unknown function (DUF5388) Glycos_trans_3N PF02885.17 gi|16082639|ref|NP_393701.1| - 0.056 13.3 0.4 0.16 11.8 0.4 1.9 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain RGS PF00615.19 gi|16082639|ref|NP_393701.1| - 0.14 12.4 3.4 0.19 12.0 1.4 1.9 1 1 1 2 2 2 0 Regulator of G protein signaling domain MFS_1 PF07690.16 gi|16081372|ref|NP_393702.1| - 7.4e-50 169.8 53.1 3e-48 164.6 46.1 2.2 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16081372|ref|NP_393702.1| - 1.5e-08 34.0 13.3 1.5e-08 34.0 13.3 2.8 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|16081372|ref|NP_393702.1| - 1.2 7.4 22.5 0.02 13.3 3.2 3.2 1 1 1 3 3 3 0 Transmembrane secretion effector ABC_tran PF00005.27 gi|16081373|ref|NP_393703.1| - 5.3e-27 95.0 0.0 9.1e-27 94.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081373|ref|NP_393703.1| - 1.2e-08 35.2 3.2 2.2e-05 24.4 0.0 2.6 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|16081373|ref|NP_393703.1| - 1.7e-07 31.9 0.9 5.6e-07 30.2 0.6 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) SMC_N PF02463.19 gi|16081373|ref|NP_393703.1| - 0.004 16.6 0.2 0.11 12.0 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|16081373|ref|NP_393703.1| - 0.0091 16.5 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|16081373|ref|NP_393703.1| - 0.057 13.2 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|16081373|ref|NP_393703.1| - 0.06 13.1 0.0 0.078 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|16081373|ref|NP_393703.1| - 0.062 12.9 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain SbcCD_C PF13558.6 gi|16081373|ref|NP_393703.1| - 0.11 12.7 0.1 0.52 10.6 0.1 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF3584 PF12128.8 gi|16081373|ref|NP_393703.1| - 0.18 9.3 0.4 0.26 8.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC2_membrane PF01061.24 gi|16081374|ref|NP_393704.1| - 7.3e-21 74.6 29.9 7.3e-21 74.6 29.9 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|16081374|ref|NP_393704.1| - 2.3e-08 33.7 24.0 3.2e-08 33.2 24.0 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|16081374|ref|NP_393704.1| - 4.7e-08 32.5 35.2 4.7e-08 32.5 35.2 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein TMEM239 PF15841.5 gi|16081374|ref|NP_393704.1| - 1.9 8.4 5.8 4.2 7.2 5.8 1.5 1 0 0 1 1 1 0 Transmembrane protein 239 family ABC2_membrane_4 PF12730.7 gi|16081374|ref|NP_393704.1| - 2.7 7.9 26.1 0.2 11.6 19.7 2.0 2 0 0 2 2 2 0 ABC-2 family transporter protein Pribosyltran PF00156.27 gi|16081375|ref|NP_393705.1| - 1.2e-15 57.4 0.0 1.9e-15 56.8 0.0 1.3 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|16081375|ref|NP_393705.1| - 0.0039 16.6 0.1 0.0047 16.4 0.1 1.3 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|16081375|ref|NP_393705.1| - 0.01 15.4 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase DLH PF01738.18 gi|16081376|ref|NP_393706.1| - 7.6e-51 172.7 0.0 9.5e-51 172.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|16081376|ref|NP_393706.1| - 0.0025 17.8 0.0 0.73 9.7 0.0 2.3 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal KRTAP7 PF15034.6 gi|16081376|ref|NP_393706.1| - 0.034 15.1 0.2 0.06 14.3 0.2 1.3 1 0 0 1 1 1 0 KRTAP type 7 family Hydrolase_4 PF12146.8 gi|16081376|ref|NP_393706.1| - 0.071 12.4 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 AMP-binding PF00501.28 gi|16081377|ref|NP_393707.1| - 2e-66 224.4 0.0 2.5e-66 224.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|16081377|ref|NP_393707.1| - 2.2e-15 56.3 0.2 5.8e-15 54.9 0.2 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|16081377|ref|NP_393707.1| - 1.9e-13 51.2 0.3 3.5e-13 50.3 0.3 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|16081378|ref|NP_393708.1| - 8.2e-41 139.7 1.9 1.2e-40 139.1 1.9 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|16081378|ref|NP_393708.1| - 8.8e-29 100.5 0.0 1.8e-28 99.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16081378|ref|NP_393708.1| - 4.9e-20 71.5 0.0 8.9e-20 70.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|16081378|ref|NP_393708.1| - 1.4e-14 54.5 0.1 2e-14 54.0 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain NTP_transf_3 PF12804.7 gi|16081379|ref|NP_393709.1| - 7.7e-11 42.6 0.0 9.9e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|16081379|ref|NP_393709.1| - 0.058 13.3 0.0 0.34 10.8 0.0 2.0 1 1 0 1 1 1 0 Cytidylyltransferase ABC_tran PF00005.27 gi|16081381|ref|NP_393712.1| - 8.8e-30 104.0 0.0 1.2e-29 103.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081381|ref|NP_393712.1| - 7e-13 49.0 1.9 1.1e-05 25.5 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|16081381|ref|NP_393712.1| - 7.7e-05 22.6 0.1 0.0012 18.6 0.0 1.9 1 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|16081381|ref|NP_393712.1| - 0.00052 19.5 0.2 0.67 9.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|16081381|ref|NP_393712.1| - 0.0013 18.5 0.1 0.0024 17.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|16081381|ref|NP_393712.1| - 0.0094 15.7 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|16081381|ref|NP_393712.1| - 0.01 15.7 0.3 0.032 14.1 0.1 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_10 PF12846.7 gi|16081381|ref|NP_393712.1| - 0.015 14.2 0.4 0.89 8.4 0.1 2.2 1 1 1 2 2 2 0 AAA-like domain AAA_16 PF13191.6 gi|16081381|ref|NP_393712.1| - 0.029 14.8 0.0 0.048 14.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|16081381|ref|NP_393712.1| - 0.031 14.8 1.4 0.056 13.9 1.4 1.8 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|16081381|ref|NP_393712.1| - 0.04 13.8 0.5 0.099 12.6 0.1 1.8 2 1 0 2 2 2 0 Rad17 P-loop domain PH_8 PF15409.6 gi|16081381|ref|NP_393712.1| - 0.044 14.1 0.2 0.15 12.4 0.1 1.8 2 0 0 2 2 2 0 Pleckstrin homology domain AAA PF00004.29 gi|16081381|ref|NP_393712.1| - 0.045 14.2 0.9 0.33 11.4 0.8 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 gi|16081381|ref|NP_393712.1| - 0.051 13.2 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|16081381|ref|NP_393712.1| - 0.065 13.0 0.1 0.55 9.9 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.6 gi|16081381|ref|NP_393712.1| - 0.093 13.0 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|16081381|ref|NP_393712.1| - 0.13 12.0 0.0 0.29 10.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|16081381|ref|NP_393712.1| - 0.17 12.1 0.7 0.28 11.4 0.2 1.6 2 0 0 2 2 2 0 AAA domain BaxI_1 PF12811.7 gi|16082641|ref|NP_393713.1| - 0.017 14.7 2.4 0.016 14.8 2.4 1.0 1 0 0 1 1 1 0 Bax inhibitor 1 like DUF4282 PF14110.6 gi|16082641|ref|NP_393713.1| - 0.041 14.6 5.5 0.047 14.4 5.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF996 PF06195.13 gi|16082641|ref|NP_393713.1| - 0.074 13.3 7.8 0.081 13.2 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF996) Frag1 PF10277.9 gi|16082641|ref|NP_393713.1| - 0.21 11.1 3.0 0.24 10.9 3.0 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family OATP PF03137.20 gi|16082641|ref|NP_393713.1| - 0.22 9.8 2.1 0.25 9.6 2.1 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family DUF2207 PF09972.9 gi|16082641|ref|NP_393713.1| - 1.7 7.3 4.2 1.9 7.2 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5316 PF17247.2 gi|16082641|ref|NP_393713.1| - 2 8.5 9.5 2 8.5 3.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5316) PsbX PF06596.11 gi|16082641|ref|NP_393713.1| - 7.4 6.7 11.7 1.5 8.9 2.6 2.1 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) Peptidase_S66 PF02016.15 gi|16081382|ref|NP_393714.1| - 5.1e-39 133.1 0.0 7.4e-39 132.6 0.0 1.2 1 0 0 1 1 1 1 LD-carboxypeptidase N-terminal domain Peptidase_S66C PF17676.1 gi|16081382|ref|NP_393714.1| - 7.9e-27 94.3 0.0 1.4e-26 93.5 0.0 1.4 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain M20_dimer PF07687.14 gi|16081383|ref|NP_393715.1| - 9.6e-07 28.7 0.1 2.4e-06 27.4 0.0 1.7 2 0 0 2 2 2 1 Peptidase dimerisation domain AMP-binding_C_2 PF14535.6 gi|16081383|ref|NP_393715.1| - 0.08 13.3 0.1 0.3 11.4 0.0 2.0 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain AMMECR1 PF01871.17 gi|16082500|ref|NP_393716.1| - 2e-45 154.4 0.0 2.3e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Memo PF01875.17 gi|16081384|ref|NP_393717.1| - 3.1e-70 236.4 0.0 3.5e-70 236.2 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein Amidohydro_1 PF01979.20 gi|16081385|ref|NP_393718.1| - 1.3e-31 110.2 0.1 5e-31 108.3 0.1 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|16081385|ref|NP_393718.1| - 6.2e-22 78.7 0.8 2.2e-13 50.5 0.1 2.3 1 1 1 2 2 2 2 Amidohydrolase family Urocanase_C PF17392.2 gi|16082501|ref|NP_393719.1| - 7.7e-94 312.6 0.6 1.4e-93 311.8 0.6 1.4 1 0 0 1 1 1 1 Urocanase C-terminal domain Urocanase PF01175.18 gi|16082501|ref|NP_393719.1| - 3.5e-84 281.7 0.0 4.8e-84 281.2 0.0 1.2 1 0 0 1 1 1 1 Urocanase Rossmann-like domain Urocanase_N PF17391.2 gi|16082501|ref|NP_393719.1| - 1.9e-57 192.4 0.0 3.1e-57 191.7 0.0 1.3 1 0 0 1 1 1 1 Urocanase N-terminal domain DUF4115 PF13464.6 gi|16082501|ref|NP_393719.1| - 0.17 12.1 0.2 2.2 8.5 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4115) AA_permease PF00324.21 gi|16081386|ref|NP_393720.1| - 3.1e-28 98.6 53.2 4.3e-28 98.2 53.2 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16081386|ref|NP_393720.1| - 1.9e-24 86.3 57.1 3.2e-24 85.6 57.1 1.3 1 1 0 1 1 1 1 Amino acid permease DrsE PF02635.15 gi|16081387|ref|NP_393721.1| - 0.00028 21.3 0.1 0.00041 20.7 0.1 1.3 1 0 0 1 1 1 1 DsrE/DsrF-like family Lyase_aromatic PF00221.19 gi|16081388|ref|NP_393722.1| - 4.9e-180 599.1 0.0 5.6e-180 599.0 0.0 1.0 1 0 0 1 1 1 1 Aromatic amino acid lyase HTH_46 PF15977.5 gi|16082642|ref|NP_393723.1| - 0.0018 18.2 0.1 0.0026 17.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA binding HTH_43 PF09904.9 gi|16082642|ref|NP_393723.1| - 0.0018 18.2 0.0 0.0022 17.9 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn helix MarR_2 PF12802.7 gi|16082642|ref|NP_393723.1| - 0.0021 17.9 0.0 0.0026 17.6 0.0 1.1 1 0 0 1 1 1 1 MarR family RepL PF05732.11 gi|16082642|ref|NP_393723.1| - 0.023 14.1 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.6 gi|16082642|ref|NP_393723.1| - 0.044 13.3 0.0 0.059 12.9 0.0 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|16082642|ref|NP_393723.1| - 0.052 13.6 0.0 0.067 13.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 gi|16082642|ref|NP_393723.1| - 0.098 12.6 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|16082642|ref|NP_393723.1| - 0.12 12.3 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain PYRIN PF02758.16 gi|16082642|ref|NP_393723.1| - 0.13 12.5 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain CMD PF02627.20 gi|16081389|ref|NP_393724.1| - 2.4e-21 75.5 0.0 3.2e-21 75.1 0.0 1.2 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family zf-RING_13 PF17977.1 gi|16081389|ref|NP_393724.1| - 0.0064 16.6 0.1 0.0084 16.2 0.1 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain CM_2 PF01817.21 gi|16082502|ref|NP_393725.1| - 5.5e-11 42.7 0.6 9.2e-11 41.9 0.6 1.4 1 0 0 1 1 1 1 Chorismate mutase type II PDH PF02153.17 gi|16082503|ref|NP_393726.1| - 1.7e-05 23.9 0.0 2.5e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase DUF2208 PF09973.9 gi|16082503|ref|NP_393726.1| - 0.029 14.0 0.0 0.049 13.2 0.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DAHP_synth_1 PF00793.20 gi|16081390|ref|NP_393727.1| - 4.2e-59 199.7 0.0 5e-59 199.4 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.14 gi|16081390|ref|NP_393727.1| - 3.5e-07 29.9 0.0 0.0026 17.3 0.0 2.2 2 0 0 2 2 2 2 NeuB family AP_endonuc_2 PF01261.24 gi|16081390|ref|NP_393727.1| - 0.056 12.9 0.0 9.5 5.6 0.0 2.4 2 1 0 2 2 2 0 Xylose isomerase-like TIM barrel Radical_SAM PF04055.21 gi|16081391|ref|NP_393728.1| - 6.5e-17 62.4 0.1 2.1e-16 60.8 0.0 1.8 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|16081391|ref|NP_393728.1| - 0.011 16.0 0.0 0.022 15.0 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain zf-ribbon_3 PF13248.6 gi|16081391|ref|NP_393728.1| - 0.093 12.2 0.1 0.093 12.2 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain DZR PF12773.7 gi|16081391|ref|NP_393728.1| - 0.17 11.9 0.1 0.17 11.9 0.1 2.9 3 0 0 3 3 3 0 Double zinc ribbon DpnI PF06044.12 gi|16081391|ref|NP_393728.1| - 0.18 11.4 0.7 0.72 9.5 0.2 2.1 2 0 0 2 2 2 0 Dam-replacing family MR_MLE_C PF13378.6 gi|16081392|ref|NP_393729.1| - 2.5e-41 141.6 0.0 3.4e-41 141.2 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|16081392|ref|NP_393729.1| - 6.5e-09 36.0 0.0 1.2e-08 35.1 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Enolase_C PF00113.22 gi|16081392|ref|NP_393729.1| - 2.4e-05 23.8 0.0 5.6e-05 22.5 0.0 1.6 1 1 0 1 1 1 1 Enolase, C-terminal TIM barrel domain MAAL_C PF07476.11 gi|16081392|ref|NP_393729.1| - 0.038 13.1 0.0 0.063 12.4 0.0 1.3 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Aminoglyc_resit PF10706.9 gi|16081392|ref|NP_393729.1| - 0.16 11.7 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 Aminoglycoside-2''-adenylyltransferase GFO_IDH_MocA PF01408.22 gi|16081393|ref|NP_393730.1| - 6.2e-15 56.1 0.0 1.1e-14 55.3 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|16081393|ref|NP_393730.1| - 0.00031 20.7 0.1 0.00061 19.8 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain TrkA_N PF02254.18 gi|16081393|ref|NP_393730.1| - 0.12 12.7 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain adh_short_C2 PF13561.6 gi|16081394|ref|NP_393731.1| - 2.6e-62 210.4 0.1 3.1e-62 210.2 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081394|ref|NP_393731.1| - 4.6e-50 169.8 0.1 5.6e-50 169.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081394|ref|NP_393731.1| - 1.7e-07 31.3 0.0 3.5e-07 30.3 0.0 1.5 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|16081394|ref|NP_393731.1| - 0.0027 17.2 0.1 0.0053 16.2 0.1 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 gi|16081394|ref|NP_393731.1| - 0.096 12.0 0.0 1.9 7.8 0.0 2.5 3 0 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 gi|16081394|ref|NP_393731.1| - 0.15 11.9 0.4 0.36 10.7 0.1 1.7 2 1 0 2 2 2 0 NAD(P)H-binding Sugar_tr PF00083.24 gi|16081395|ref|NP_393732.1| - 8.5e-91 305.1 30.8 1.1e-90 304.8 30.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081395|ref|NP_393732.1| - 2.1e-22 79.5 51.4 8e-22 77.6 46.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 gi|16081395|ref|NP_393732.1| - 0.00017 20.2 4.5 0.00017 20.2 4.5 1.4 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_3 PF05977.13 gi|16081395|ref|NP_393732.1| - 0.0022 16.5 6.2 0.0022 16.5 6.2 1.6 2 0 0 2 2 2 1 Transmembrane secretion effector NADH-u_ox-rdase PF10785.9 gi|16081395|ref|NP_393732.1| - 4.6 8.0 0.0 4.6 8.0 0.0 3.5 3 1 0 3 3 3 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit DUF2371 PF10177.9 gi|16081396|ref|NP_393733.1| - 0.0035 17.5 2.0 0.13 12.5 0.4 2.1 2 0 0 2 2 2 1 Uncharacterised conserved protein (DUF2371) Saf_2TM PF18303.1 gi|16081396|ref|NP_393733.1| - 0.011 15.3 5.5 0.15 11.7 0.5 2.3 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF3185 PF11381.8 gi|16081396|ref|NP_393733.1| - 0.015 15.3 18.2 0.37 10.9 4.6 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3185) DUF3040 PF11239.8 gi|16081396|ref|NP_393733.1| - 0.047 14.0 5.6 2.6 8.4 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) phiKZ_IP PF12699.7 gi|16081396|ref|NP_393733.1| - 0.24 10.5 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins Pox_A14 PF05767.12 gi|16081396|ref|NP_393733.1| - 0.44 10.7 4.5 0.36 11.0 0.5 2.3 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 ECSCR PF15820.5 gi|16081396|ref|NP_393733.1| - 0.68 9.8 3.6 0.42 10.5 0.7 2.0 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator HCMV_UL124 PF17609.2 gi|16081396|ref|NP_393733.1| - 0.71 10.1 6.3 1.2 9.4 0.9 2.2 1 1 1 2 2 2 0 Family of unknown function DUF3098 PF11297.8 gi|16081396|ref|NP_393733.1| - 0.74 9.5 8.8 2.5 7.8 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) Neurensin PF14927.6 gi|16081396|ref|NP_393733.1| - 1.9 8.2 7.8 0.17 11.6 0.4 2.3 2 1 0 2 2 2 0 Neurensin DUF2070 PF09843.9 gi|16081396|ref|NP_393733.1| - 3.1 6.0 13.4 3.9 5.7 13.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Insulin_TMD PF17870.1 gi|16081396|ref|NP_393733.1| - 3.3 7.9 9.7 7 6.8 0.7 2.4 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment SdpI PF13630.6 gi|16081396|ref|NP_393733.1| - 3.4 7.9 11.0 0.62 10.2 3.7 2.4 2 0 0 2 2 2 0 SdpI/YhfL protein family Peptidase_A24 PF01478.18 gi|16081397|ref|NP_393734.1| - 0.0088 16.4 15.1 0.11 12.9 15.0 2.7 1 1 1 2 2 2 1 Type IV leader peptidase family Arc_PepC_II PF06847.11 gi|16081397|ref|NP_393734.1| - 0.017 15.6 1.6 0.077 13.5 0.0 2.4 2 1 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II TMEMspv1-c74-12 PF11044.8 gi|16081397|ref|NP_393734.1| - 1.1 9.3 7.8 0.34 10.9 0.6 2.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Diphthamide_syn PF01866.17 gi|16081398|ref|NP_393735.1| - 5.6e-66 223.0 0.0 7e-66 222.7 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein DUF1847 PF08901.11 gi|16081398|ref|NP_393735.1| - 0.16 11.6 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) Radical_SAM PF04055.21 gi|16081399|ref|NP_393736.1| - 1.7e-21 77.3 0.1 3.2e-21 76.4 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.20 gi|16081399|ref|NP_393736.1| - 1.8e-14 53.6 0.0 4.1e-14 52.4 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|16081399|ref|NP_393736.1| - 0.0021 18.0 0.0 0.0042 17.0 0.0 1.5 1 0 0 1 1 1 1 TRAM domain HTH_24 PF13412.6 gi|16081400|ref|NP_393737.1| - 1.2e-13 50.4 1.2 2.5e-13 49.4 1.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|16081400|ref|NP_393737.1| - 4e-13 49.0 0.1 6.6e-13 48.3 0.1 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|16081400|ref|NP_393737.1| - 1.5e-08 34.4 0.0 2.4e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_DeoR PF08220.12 gi|16081400|ref|NP_393737.1| - 1.3e-05 24.8 0.1 2.5e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|16081400|ref|NP_393737.1| - 3.8e-05 23.5 0.3 7e-05 22.7 0.3 1.5 1 0 0 1 1 1 1 HTH domain HTH_36 PF13730.6 gi|16081400|ref|NP_393737.1| - 0.00016 21.6 0.1 0.00029 20.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|16081400|ref|NP_393737.1| - 0.00025 20.9 0.0 0.00046 20.1 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|16081400|ref|NP_393737.1| - 0.00041 19.9 0.0 0.0008 19.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|16081400|ref|NP_393737.1| - 0.00066 19.1 0.1 0.0016 18.0 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|16081400|ref|NP_393737.1| - 0.00093 18.9 0.2 0.0032 17.2 0.1 1.9 2 0 0 2 2 1 1 Homeodomain-like domain HTH_Mga PF08280.11 gi|16081400|ref|NP_393737.1| - 0.0013 18.8 0.1 0.0027 17.7 0.1 1.6 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain Phage_rep_O PF04492.13 gi|16081400|ref|NP_393737.1| - 0.0016 19.0 0.1 0.0044 17.6 0.1 1.8 1 0 0 1 1 1 1 Bacteriophage replication protein O GerE PF00196.19 gi|16081400|ref|NP_393737.1| - 0.0017 17.9 1.8 0.0063 16.0 0.6 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 gi|16081400|ref|NP_393737.1| - 0.0026 17.5 0.0 0.0046 16.7 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|16081400|ref|NP_393737.1| - 0.0038 17.3 0.1 0.51 10.5 0.1 2.6 3 0 0 3 3 2 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|16081400|ref|NP_393737.1| - 0.0039 16.9 0.2 0.009 15.8 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|16081400|ref|NP_393737.1| - 0.0045 16.6 0.0 0.0093 15.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|16081400|ref|NP_393737.1| - 0.0047 16.8 0.1 0.0091 15.9 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|16081400|ref|NP_393737.1| - 0.0054 16.6 0.1 0.0091 15.9 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_Tnp_ISL3 PF13542.6 gi|16081400|ref|NP_393737.1| - 0.022 14.1 0.1 0.047 13.1 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_ECF PF07638.11 gi|16081400|ref|NP_393737.1| - 0.024 14.5 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor RP-C PF03428.13 gi|16081400|ref|NP_393737.1| - 0.024 14.3 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF1670 PF07900.11 gi|16081400|ref|NP_393737.1| - 0.038 13.3 0.1 0.12 11.7 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1670) HTH_29 PF13551.6 gi|16081400|ref|NP_393737.1| - 0.046 13.8 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Phage_antitermQ PF06530.12 gi|16081400|ref|NP_393737.1| - 0.058 13.3 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Phage antitermination protein Q HTH_50 PF18024.1 gi|16081400|ref|NP_393737.1| - 0.064 12.9 0.0 3 7.5 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|16081400|ref|NP_393737.1| - 0.072 13.4 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator Phage_X PF05155.15 gi|16081400|ref|NP_393737.1| - 0.088 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 Phage X family DUF2949 PF11165.8 gi|16081400|ref|NP_393737.1| - 0.096 13.0 0.0 0.45 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2949) HTH_20 PF12840.7 gi|16081400|ref|NP_393737.1| - 0.097 12.8 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Put_DNA-bind_N PF06971.13 gi|16081400|ref|NP_393737.1| - 0.11 12.5 0.1 0.26 11.3 0.1 1.6 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus Fe_dep_repress PF01325.19 gi|16081400|ref|NP_393737.1| - 0.12 12.6 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FeoC PF09012.10 gi|16081400|ref|NP_393737.1| - 0.13 12.3 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator Lyase_1 PF00206.20 gi|16081401|ref|NP_393738.1| - 1.1e-89 300.9 0.5 1.4e-89 300.6 0.5 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|16081401|ref|NP_393738.1| - 9.5e-14 51.6 0.1 2.4e-13 50.3 0.1 1.7 1 0 0 1 1 1 1 Fumarase C C-terminus HBB PF06777.11 gi|16081401|ref|NP_393738.1| - 0.045 13.4 0.1 2.6 7.7 0.0 3.0 2 1 0 2 2 2 0 Helical and beta-bridge domain POR_N PF01855.19 gi|16082504|ref|NP_393739.1| - 8.1e-57 192.6 0.1 1.1e-56 192.2 0.1 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|16082504|ref|NP_393739.1| - 2.8e-36 125.2 0.3 6.2e-36 124.1 0.3 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|16082504|ref|NP_393739.1| - 4.5e-11 43.0 0.0 1.1e-10 41.7 0.0 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|16082504|ref|NP_393739.1| - 0.0011 18.8 0.0 0.0037 17.1 0.0 1.8 2 0 0 2 2 2 1 Transketolase, C-terminal domain Adeno_E3 PF06040.11 gi|16082504|ref|NP_393739.1| - 0.033 14.4 0.0 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 Adenovirus E3 protein TPP_enzyme_N PF02776.18 gi|16082504|ref|NP_393739.1| - 0.092 12.3 0.0 0.21 11.2 0.0 1.6 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|16081402|ref|NP_393740.1| - 3.1e-30 105.0 0.0 1.4e-29 102.8 0.1 2.0 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|16081402|ref|NP_393740.1| - 3.1e-23 81.7 1.0 6.1e-23 80.7 1.0 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal SBP_bac_5 PF00496.22 gi|16081403|ref|NP_393741.1| - 1.4e-22 80.2 11.1 3.5e-18 65.7 8.7 3.1 2 1 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle 4HB_MCP_1 PF12729.7 gi|16081403|ref|NP_393741.1| - 0.18 11.3 0.1 0.41 10.2 0.1 1.5 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction BPD_transp_1 PF00528.22 gi|16081405|ref|NP_393743.1| - 7.5e-43 146.4 10.4 7.5e-43 146.4 10.4 2.3 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|16081406|ref|NP_393744.1| - 2.9e-28 98.9 14.3 4.4e-28 98.3 14.3 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|16081407|ref|NP_393745.1| - 1e-27 97.3 0.0 1.5e-27 96.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|16081407|ref|NP_393745.1| - 1.2e-19 70.6 0.1 2e-19 69.8 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|16081407|ref|NP_393745.1| - 3.7e-07 30.3 0.4 0.00078 19.3 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|16081407|ref|NP_393745.1| - 0.00016 21.5 0.0 0.018 14.8 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|16081407|ref|NP_393745.1| - 0.0015 18.0 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain TniB PF05621.11 gi|16081407|ref|NP_393745.1| - 0.0061 16.0 1.3 0.18 11.2 0.2 2.3 2 1 0 2 2 2 1 Bacterial TniB protein AAA_29 PF13555.6 gi|16081407|ref|NP_393745.1| - 0.014 15.1 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain CobU PF02283.16 gi|16081407|ref|NP_393745.1| - 0.047 13.3 0.3 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_18 PF13238.6 gi|16081407|ref|NP_393745.1| - 0.16 12.6 0.1 0.39 11.3 0.1 1.8 1 1 1 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|16081407|ref|NP_393745.1| - 0.16 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_33 PF13671.6 gi|16081407|ref|NP_393745.1| - 0.2 11.8 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|16081407|ref|NP_393745.1| - 0.29 11.4 0.8 3 8.1 0.8 2.2 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|16081408|ref|NP_393746.1| - 2.4e-32 112.3 0.0 3.5e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|16081408|ref|NP_393746.1| - 7.5e-21 74.4 0.0 1.5e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|16081408|ref|NP_393746.1| - 8.6e-06 26.1 0.6 2.5e-05 24.5 0.6 1.6 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|16081408|ref|NP_393746.1| - 5.5e-05 23.1 0.5 0.00083 19.3 0.0 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16081408|ref|NP_393746.1| - 0.0001 21.8 1.6 0.0059 16.1 1.6 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|16081408|ref|NP_393746.1| - 0.0074 16.5 0.2 0.062 13.5 0.2 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ATPase PF06745.13 gi|16081408|ref|NP_393746.1| - 0.0086 15.4 1.0 0.043 13.2 0.1 2.0 2 0 0 2 2 2 1 KaiC AAA_29 PF13555.6 gi|16081408|ref|NP_393746.1| - 0.011 15.5 0.1 0.023 14.4 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|16081408|ref|NP_393746.1| - 0.048 12.3 0.3 0.27 9.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|16081408|ref|NP_393746.1| - 0.13 12.0 1.7 0.27 10.9 1.5 1.8 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 gi|16081408|ref|NP_393746.1| - 0.14 11.4 2.9 0.61 9.2 2.9 1.8 1 1 0 1 1 1 0 NB-ARC domain bPH_2 PF03703.14 gi|16081409|ref|NP_393747.1| - 1e-06 28.8 0.0 1.9e-06 27.9 0.0 1.5 1 1 0 1 1 1 1 Bacterial PH domain bPH_5 PF10882.8 gi|16081409|ref|NP_393747.1| - 0.021 14.9 0.0 0.059 13.4 0.0 1.8 1 1 1 2 2 2 0 Bacterial PH domain bPH_4 PF06713.11 gi|16081409|ref|NP_393747.1| - 0.035 14.2 0.5 0.069 13.2 0.1 1.9 2 1 0 2 2 2 0 Bacterial PH domain DUF5357 PF17310.2 gi|16081409|ref|NP_393747.1| - 0.12 10.9 0.3 0.22 10.0 0.2 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5357) Peptidase_A24 PF01478.18 gi|16081409|ref|NP_393747.1| - 0.15 12.5 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Type IV leader peptidase family BPD_transp_1 PF00528.22 gi|16081410|ref|NP_393748.1| - 3.4e-36 124.7 14.3 3.4e-36 124.7 14.3 2.2 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|16081411|ref|NP_393749.1| - 4e-17 62.5 22.2 4e-17 62.5 22.2 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|16081411|ref|NP_393749.1| - 0.031 14.2 0.2 0.031 14.2 0.2 3.7 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|16081412|ref|NP_393750.1| - 3.2e-55 186.4 0.0 2.3e-28 99.4 0.0 2.4 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|16081412|ref|NP_393750.1| - 2e-35 121.1 0.0 1.6e-16 60.5 0.0 2.6 2 0 0 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|16081412|ref|NP_393750.1| - 5e-10 39.2 6.6 8.5e-07 28.6 0.8 3.1 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|16081412|ref|NP_393750.1| - 2.4e-09 37.4 7.5 0.0037 17.1 0.0 4.2 2 2 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|16081412|ref|NP_393750.1| - 4.5e-09 36.7 0.1 0.0023 18.2 0.0 2.9 3 1 0 3 3 2 2 AAA domain AAA_29 PF13555.6 gi|16081412|ref|NP_393750.1| - 6.7e-07 29.0 2.2 0.0044 16.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|16081412|ref|NP_393750.1| - 1.2e-06 29.0 0.0 0.023 15.1 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|16081412|ref|NP_393750.1| - 1.4e-06 28.4 1.0 0.012 15.5 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase PRK PF00485.18 gi|16081412|ref|NP_393750.1| - 1.4e-06 28.2 0.0 0.017 14.9 0.0 2.5 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.6 gi|16081412|ref|NP_393750.1| - 2.3e-06 28.2 1.6 0.039 14.5 0.3 2.6 2 1 0 2 2 2 2 AAA domain NACHT PF05729.12 gi|16081412|ref|NP_393750.1| - 0.00011 22.2 0.9 0.071 13.0 0.0 2.3 2 0 0 2 2 2 2 NACHT domain MobB PF03205.14 gi|16081412|ref|NP_393750.1| - 0.00032 20.6 1.0 0.26 11.2 0.3 2.5 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|16081412|ref|NP_393750.1| - 0.00038 21.0 0.5 0.68 10.5 0.0 3.1 3 0 0 3 3 2 1 AAA domain AAA_24 PF13479.6 gi|16081412|ref|NP_393750.1| - 0.00073 19.3 1.6 1.1 9.0 0.4 2.6 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|16081412|ref|NP_393750.1| - 0.0011 18.6 0.2 0.88 9.0 0.0 2.4 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_33 PF13671.6 gi|16081412|ref|NP_393750.1| - 0.0012 19.0 0.9 2.1 8.5 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|16081412|ref|NP_393750.1| - 0.0013 18.7 0.2 1.1 9.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 gi|16081412|ref|NP_393750.1| - 0.0013 17.9 6.1 0.21 10.7 0.0 3.2 3 1 0 4 4 4 2 NB-ARC domain Mg_chelatase PF01078.21 gi|16081412|ref|NP_393750.1| - 0.0019 17.6 0.1 0.65 9.3 0.0 2.5 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI MMR_HSR1 PF01926.23 gi|16081412|ref|NP_393750.1| - 0.0022 18.1 0.1 2.5 8.2 0.0 2.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 gi|16081412|ref|NP_393750.1| - 0.0034 17.1 0.0 1.4 8.5 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 gi|16081412|ref|NP_393750.1| - 0.0038 17.4 4.9 0.12 12.4 0.1 3.0 3 0 0 3 3 3 1 Helicase HerA, central domain G-alpha PF00503.20 gi|16081412|ref|NP_393750.1| - 0.004 16.4 0.2 0.55 9.3 0.0 2.2 2 0 0 2 2 2 1 G-protein alpha subunit Roc PF08477.13 gi|16081412|ref|NP_393750.1| - 0.0052 17.0 0.5 5.2 7.3 0.0 3.1 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 gi|16081412|ref|NP_393750.1| - 0.0056 16.1 2.0 5.6 6.3 0.0 4.3 4 1 1 5 5 5 0 Bacterial TniB protein RNA_helicase PF00910.22 gi|16081412|ref|NP_393750.1| - 0.007 16.7 0.3 2.7 8.4 0.1 2.9 2 0 0 2 2 2 1 RNA helicase PhoH PF02562.16 gi|16081412|ref|NP_393750.1| - 0.0073 15.8 0.7 4.5 6.7 0.0 3.1 3 0 0 3 3 3 0 PhoH-like protein Septin PF00735.18 gi|16081412|ref|NP_393750.1| - 0.0073 15.6 0.1 2 7.6 0.0 2.4 2 0 0 2 2 2 1 Septin DUF2075 PF09848.9 gi|16081412|ref|NP_393750.1| - 0.019 14.2 0.1 0.95 8.6 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 gi|16081412|ref|NP_393750.1| - 0.023 14.4 0.0 9.7 5.9 0.0 2.7 2 0 0 2 2 2 0 IstB-like ATP binding protein Pox_A32 PF04665.12 gi|16081412|ref|NP_393750.1| - 0.026 14.0 1.2 7.3 6.0 0.0 2.8 2 0 0 2 2 2 0 Poxvirus A32 protein AAA_25 PF13481.6 gi|16081412|ref|NP_393750.1| - 0.027 14.1 0.6 2.6 7.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain Sigma54_activat PF00158.26 gi|16081412|ref|NP_393750.1| - 0.029 14.1 0.0 7.7 6.2 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA PF00004.29 gi|16081412|ref|NP_393750.1| - 0.035 14.5 0.1 8.2 6.9 0.0 2.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|16081412|ref|NP_393750.1| - 0.038 13.7 0.0 5 6.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|16081412|ref|NP_393750.1| - 0.049 13.0 8.1 0.43 9.9 0.3 3.5 4 0 0 4 4 4 0 KaiC Ribosomal_S7 PF00177.21 gi|16081412|ref|NP_393750.1| - 0.058 13.0 0.1 0.13 11.9 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e NTPase_1 PF03266.15 gi|16081412|ref|NP_393750.1| - 0.066 13.1 0.8 3.2 7.6 0.0 2.6 2 0 0 2 2 2 0 NTPase FtsK_SpoIIIE PF01580.18 gi|16081412|ref|NP_393750.1| - 0.079 12.3 0.3 7.3 5.9 0.1 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family T2SSE PF00437.20 gi|16081412|ref|NP_393750.1| - 0.086 11.9 1.4 8.2 5.4 0.0 3.3 3 1 0 3 3 3 0 Type II/IV secretion system protein APS_kinase PF01583.20 gi|16081412|ref|NP_393750.1| - 0.19 11.6 0.5 4.8 7.0 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase ATP_bind_1 PF03029.17 gi|16081412|ref|NP_393750.1| - 0.31 10.8 1.8 8.5 6.1 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|16081412|ref|NP_393750.1| - 0.46 10.0 2.4 12 5.4 0.8 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 gi|16081412|ref|NP_393750.1| - 1.2 9.2 4.7 2.8 8.0 0.0 2.8 3 0 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF202 PF02656.15 gi|16081413|ref|NP_393751.1| - 0.15 12.5 1.5 5.6 7.5 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF202) SBP_bac_5 PF00496.22 gi|16081414|ref|NP_393752.1| - 6.4e-73 245.9 12.8 1.4e-72 244.7 12.8 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Big_1 PF02369.16 gi|16081414|ref|NP_393752.1| - 2.6e-09 37.0 22.2 2.5e-06 27.4 0.0 7.2 6 0 0 6 6 6 2 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 gi|16081414|ref|NP_393752.1| - 0.00013 22.2 10.9 0.001 19.4 0.0 4.7 3 1 1 4 4 4 1 Invasin, domain 3 MG4 PF17789.1 gi|16081414|ref|NP_393752.1| - 0.0089 16.1 7.2 0.44 10.7 0.0 4.4 4 1 1 5 5 5 1 Macroglobulin domain MG4 CarboxypepD_reg PF13620.6 gi|16081414|ref|NP_393752.1| - 0.026 14.8 0.2 0.026 14.8 0.2 6.2 5 1 1 6 6 6 0 Carboxypeptidase regulatory-like domain DUF824 PF05688.11 gi|16081414|ref|NP_393752.1| - 0.048 13.5 0.2 0.6 10.0 0.0 3.0 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) YtkA PF13115.6 gi|16081414|ref|NP_393752.1| - 0.077 13.6 0.1 13 6.4 0.1 2.9 2 0 0 2 2 2 0 YtkA-like DDE_Tnp_1_5 PF13737.6 gi|16081415|ref|NP_393753.1| - 0.0014 19.0 0.1 0.0018 18.6 0.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|16081415|ref|NP_393753.1| - 0.032 14.2 0.1 0.045 13.8 0.1 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|16081416|ref|NP_393754.1| - 3.9e-06 26.7 0.0 4.3e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_3 PF13612.6 gi|16081416|ref|NP_393754.1| - 0.11 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Transposase DDE domain Rv2175c_C PF18367.1 gi|16081416|ref|NP_393754.1| - 0.2 11.7 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function SBP_bac_5 PF00496.22 gi|16081417|ref|NP_393755.1| - 6.9e-43 147.0 9.9 3.8e-35 121.5 7.6 2.9 2 1 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle 4HB_MCP_1 PF12729.7 gi|16081417|ref|NP_393755.1| - 0.0035 16.9 0.3 0.0061 16.1 0.3 1.3 1 0 0 1 1 1 1 Four helix bundle sensory module for signal transduction Radical_SAM PF04055.21 gi|16081418|ref|NP_393756.1| - 2.8e-16 60.3 0.0 4.4e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|16081418|ref|NP_393756.1| - 2.7e-09 37.4 1.8 7.8e-09 35.9 0.1 2.3 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|16081418|ref|NP_393756.1| - 6.5e-06 26.3 2.8 9.1e-06 25.8 0.0 2.4 3 0 0 3 3 3 1 4Fe-4S single cluster domain DUF3463 PF11946.8 gi|16081418|ref|NP_393756.1| - 0.00024 20.9 2.5 0.0012 18.7 2.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3463) MGS PF02142.22 gi|16081418|ref|NP_393756.1| - 0.038 14.2 0.1 1.4 9.1 0.1 2.3 2 0 0 2 2 2 0 MGS-like domain DnaB_2 PF07261.11 gi|16081418|ref|NP_393756.1| - 0.079 12.7 0.1 0.52 10.1 0.0 2.3 2 0 0 2 2 2 0 Replication initiation and membrane attachment HAD_2 PF13419.6 gi|16081418|ref|NP_393756.1| - 0.43 10.6 3.2 0.99 9.5 0.1 2.7 1 1 3 4 4 4 0 Haloacid dehalogenase-like hydrolase Acetyltransf_1 PF00583.25 gi|16081419|ref|NP_393757.1| - 1e-15 58.0 0.1 1.5e-15 57.4 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16081419|ref|NP_393757.1| - 4.7e-13 49.2 0.2 6e-13 48.8 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16081419|ref|NP_393757.1| - 1.1e-11 45.1 0.2 1.4e-11 44.8 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|16081419|ref|NP_393757.1| - 1.2e-09 39.0 0.0 1.6e-09 38.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16081419|ref|NP_393757.1| - 7.3e-09 35.9 0.1 1.1e-08 35.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081419|ref|NP_393757.1| - 0.00027 20.9 0.1 0.00047 20.1 0.1 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|16081419|ref|NP_393757.1| - 0.0036 17.4 0.0 0.01 15.9 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|16081419|ref|NP_393757.1| - 0.0063 16.2 0.0 0.0085 15.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HTH_5 PF01022.20 gi|16081420|ref|NP_393758.1| - 0.013 15.4 0.0 0.031 14.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_9 PF08221.11 gi|16081420|ref|NP_393758.1| - 0.036 14.2 0.1 0.078 13.1 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MerR PF00376.23 gi|16081420|ref|NP_393758.1| - 0.055 13.2 0.0 1.6 8.5 0.0 2.1 2 0 0 2 2 2 0 MerR family regulatory protein HTH_15 PF12324.8 gi|16081420|ref|NP_393758.1| - 0.068 13.1 0.1 2.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase TrmB PF01978.19 gi|16081420|ref|NP_393758.1| - 0.08 12.8 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|16081420|ref|NP_393758.1| - 0.12 12.0 2.5 0.092 12.3 0.8 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding RtcB PF01139.17 gi|16081421|ref|NP_393759.1| - 2.2e-140 468.5 0.1 2.5e-140 468.3 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Phosphorylase PF00343.20 gi|16081421|ref|NP_393759.1| - 0.066 11.5 0.0 0.094 11.0 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate phosphorylase CARDB PF07705.11 gi|16081422|ref|NP_393760.1| - 7.8e-19 67.8 0.6 7.8e-19 67.8 0.6 4.8 2 1 2 4 4 4 1 CARDB DUF4982 PF16355.5 gi|16081422|ref|NP_393760.1| - 0.0092 15.9 0.8 3.1 7.8 0.0 3.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4982) PKD_3 PF16820.5 gi|16081422|ref|NP_393760.1| - 0.079 12.7 1.7 1 9.1 0.2 3.4 3 0 0 3 3 3 0 PKD-like domain tRNA-synt_1d PF00750.19 gi|16081423|ref|NP_393761.1| - 3.5e-31 108.4 0.8 4.5e-31 108.1 0.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|16081423|ref|NP_393761.1| - 3.2e-25 88.6 0.0 1.8e-24 86.2 0.0 2.3 2 0 0 2 2 2 1 DALR anticodon binding domain tRNA-synt_1f PF01921.18 gi|16081423|ref|NP_393761.1| - 1.4e-07 30.8 0.2 0.0035 16.3 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|16081423|ref|NP_393761.1| - 0.0011 18.4 0.6 1.1 8.5 0.1 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|16081423|ref|NP_393761.1| - 0.003 16.4 0.2 0.28 9.9 0.0 3.0 3 1 0 3 3 3 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|16081423|ref|NP_393761.1| - 0.015 13.6 0.2 0.5 8.5 0.0 2.7 3 0 0 3 3 3 0 tRNA synthetases class I (I, L, M and V) DUF4404 PF14357.6 gi|16081423|ref|NP_393761.1| - 0.048 14.3 0.4 0.24 12.1 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4404) EPSP_synthase PF00275.20 gi|16081424|ref|NP_393762.1| - 4.4e-53 180.5 0.0 5.3e-53 180.2 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PMBR PF09373.10 gi|16081424|ref|NP_393762.1| - 0.032 14.4 0.4 2.4 8.5 0.0 3.3 3 0 0 3 3 3 0 Pseudomurein-binding repeat GHMP_kinases_N PF00288.26 gi|16081425|ref|NP_393763.1| - 9.7e-10 38.5 0.7 1.9e-09 37.6 0.7 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|16081425|ref|NP_393763.1| - 0.0011 19.3 0.2 0.0034 17.7 0.1 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal Shikimate_dh_N PF08501.11 gi|16081426|ref|NP_393764.1| - 1.4e-16 60.5 0.0 3.8e-16 59.1 0.0 1.8 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|16081426|ref|NP_393764.1| - 0.00089 19.3 0.1 0.0018 18.3 0.1 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase KR PF08659.10 gi|16081426|ref|NP_393764.1| - 0.0092 15.9 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 1 KR domain ELFV_dehydrog PF00208.21 gi|16081426|ref|NP_393764.1| - 0.011 15.5 0.1 0.066 12.9 0.0 1.9 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PglD_N PF17836.1 gi|16081426|ref|NP_393764.1| - 0.023 15.4 0.1 0.13 12.9 0.0 2.0 2 0 0 2 2 2 0 PglD N-terminal domain NAD_binding_7 PF13241.6 gi|16081426|ref|NP_393764.1| - 0.031 14.7 0.0 0.046 14.2 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding NmrA PF05368.13 gi|16081426|ref|NP_393764.1| - 0.049 13.2 0.1 0.095 12.2 0.1 1.4 1 0 0 1 1 1 0 NmrA-like family NAD_binding_10 PF13460.6 gi|16081426|ref|NP_393764.1| - 0.085 12.7 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|16081426|ref|NP_393764.1| - 0.086 12.2 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|16081426|ref|NP_393764.1| - 0.13 12.6 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DHQ_synthase PF01761.20 gi|16081427|ref|NP_393765.1| - 2.7e-82 275.9 0.3 3.3e-82 275.6 0.3 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|16081427|ref|NP_393765.1| - 2.3e-09 37.3 0.2 2.6e-08 33.9 0.2 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|16081427|ref|NP_393765.1| - 5.8e-06 25.4 0.2 0.00012 21.0 0.2 2.3 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase HTH_Tnp_IS1 PF12759.7 gi|16081427|ref|NP_393765.1| - 0.026 14.1 0.2 4.5 7.0 0.0 2.6 2 0 0 2 2 2 0 InsA C-terminal domain Imm44 PF15571.6 gi|16081427|ref|NP_393765.1| - 0.13 12.5 0.2 0.13 12.5 0.2 2.3 3 0 0 3 3 3 0 Immunity protein 44 Glyco_hydro_15 PF00723.21 gi|16082505|ref|NP_393766.1| - 1.9e-74 251.1 0.1 2.3e-67 227.7 0.2 2.1 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Aldo_ket_red PF00248.21 gi|16082506|ref|NP_393767.1| - 4.1e-64 216.6 0.0 4.7e-64 216.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Radical_SAM PF04055.21 gi|16082507|ref|NP_393768.1| - 1.3e-20 74.5 0.0 1e-19 71.5 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily DUF1936 PF09151.10 gi|16081428|ref|NP_393769.1| - 5.9e-24 83.7 6.5 1e-23 82.9 6.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1936) CBS PF00571.28 gi|16081428|ref|NP_393769.1| - 1.6e-21 76.5 1.1 4.7e-11 43.0 0.3 2.4 2 0 0 2 2 2 2 CBS domain zf-TFIIB PF13453.6 gi|16081428|ref|NP_393769.1| - 0.065 12.6 0.9 0.11 11.8 0.9 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-tcix PF14952.6 gi|16081428|ref|NP_393769.1| - 0.077 12.6 0.5 8.5 6.1 0.0 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-C4_Topoisom PF01396.19 gi|16081428|ref|NP_393769.1| - 0.08 12.7 1.7 0.13 12.0 1.7 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS1595 PF12760.7 gi|16081428|ref|NP_393769.1| - 0.12 12.3 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain SCP2 PF02036.17 gi|16082508|ref|NP_393770.1| - 2.9e-17 63.0 0.1 3.4e-17 62.8 0.1 1.0 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 gi|16082508|ref|NP_393770.1| - 1.7e-05 25.1 0.0 2e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal FKBP26_C PF18046.1 gi|16082508|ref|NP_393770.1| - 0.06 13.4 0.5 0.098 12.8 0.5 1.4 1 0 0 1 1 1 0 FKBP26_C-terminal MRP-S27 PF10037.9 gi|16082508|ref|NP_393770.1| - 0.12 11.2 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 SCP2_2 PF13530.6 gi|16082508|ref|NP_393770.1| - 0.16 12.3 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Sterol carrier protein domain 3HCDH_N PF02737.18 gi|16081429|ref|NP_393771.1| - 1e-63 214.5 0.9 2.3e-63 213.3 0.9 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|16081429|ref|NP_393771.1| - 5.3e-53 179.9 0.0 8.9e-53 179.2 0.0 1.4 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|16081429|ref|NP_393771.1| - 2.1e-35 121.2 0.0 8.6e-25 87.2 0.0 3.5 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|16081429|ref|NP_393771.1| - 1.1e-29 104.1 0.0 1.7e-25 90.2 0.0 2.5 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|16081429|ref|NP_393771.1| - 5.6e-06 26.6 0.2 5.6e-06 26.6 0.2 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|16081429|ref|NP_393771.1| - 0.00013 22.0 0.1 0.00033 20.7 0.1 1.8 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|16081429|ref|NP_393771.1| - 0.0014 18.2 0.4 0.0029 17.2 0.4 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 gi|16081429|ref|NP_393771.1| - 0.01 15.2 0.2 0.022 14.1 0.2 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|16081429|ref|NP_393771.1| - 0.69 10.5 3.6 0.45 11.1 0.8 2.3 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent AMP-binding PF00501.28 gi|16081430|ref|NP_393772.1| - 9.6e-83 278.1 0.0 1.1e-82 277.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|16081430|ref|NP_393772.1| - 1.2e-13 51.8 0.0 2.7e-13 50.7 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT PF03061.22 gi|16081431|ref|NP_393773.1| - 5e-13 49.2 0.0 7.3e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|16081431|ref|NP_393773.1| - 7.7e-06 26.3 0.0 9.9e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-CoA_dh_1 PF00441.24 gi|16081432|ref|NP_393774.1| - 2.1e-14 54.0 0.0 6.3e-14 52.4 0.0 1.7 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|16081432|ref|NP_393774.1| - 3.6e-10 40.5 0.0 7.4e-10 39.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|16081432|ref|NP_393774.1| - 0.00016 21.9 0.0 0.011 16.0 0.0 2.2 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|16082509|ref|NP_393775.1| - 2.6e-34 118.6 0.4 4.2e-34 117.9 0.4 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16082509|ref|NP_393775.1| - 5.8e-28 96.9 0.1 9.8e-28 96.2 0.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|16082509|ref|NP_393775.1| - 1.7e-13 51.2 0.2 1.7e-12 48.0 0.2 2.4 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|16082509|ref|NP_393775.1| - 6e-13 49.2 0.6 1.5e-12 48.0 0.6 1.7 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Thiolase_N PF00108.23 gi|16081433|ref|NP_393776.1| - 4.7e-65 219.5 0.0 7.5e-65 218.9 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|16081433|ref|NP_393776.1| - 1.1e-47 160.7 0.6 8.1e-47 157.9 0.3 2.2 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|16081433|ref|NP_393776.1| - 6.7e-06 25.9 1.6 1.3e-05 24.9 0.2 2.1 3 0 0 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.11 gi|16081433|ref|NP_393776.1| - 0.021 13.5 0.0 0.055 12.2 0.0 1.7 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) ACP_syn_III_C PF08541.10 gi|16081433|ref|NP_393776.1| - 0.033 14.4 0.4 0.14 12.4 0.2 2.2 2 1 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEAD PF00270.29 gi|16081434|ref|NP_393777.1| - 2e-48 164.5 0.0 5.8e-48 163.0 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|16081434|ref|NP_393777.1| - 6.5e-28 97.3 0.0 1.6e-25 89.6 0.1 2.9 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 gi|16081434|ref|NP_393777.1| - 0.0012 18.3 0.1 0.0023 17.3 0.1 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit ResIII PF04851.15 gi|16081434|ref|NP_393777.1| - 0.0033 17.5 0.0 0.0049 16.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Glyco_hydro_31 PF01055.26 gi|16081435|ref|NP_393778.1| - 5.4e-130 434.5 0.6 8.5e-130 433.9 0.6 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 gi|16081435|ref|NP_393778.1| - 1.6e-18 66.7 0.2 5e-18 65.2 0.1 1.9 2 0 0 2 2 2 1 Galactose mutarotase-like Enolase_like_N PF18374.1 gi|16081435|ref|NP_393778.1| - 0.036 13.4 1.4 0.09 12.2 1.4 1.6 1 0 0 1 1 1 0 Enolase N-terminal domain-like DUF3311 PF11755.8 gi|16081436|ref|NP_393779.1| - 5.8e-12 45.4 0.7 7e-12 45.1 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) Peptidase_M1 PF01433.20 gi|16081438|ref|NP_393781.1| - 7e-79 264.4 0.3 1.2e-78 263.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 gi|16081438|ref|NP_393781.1| - 9.6e-34 117.3 0.0 1.3e-33 116.9 0.0 1.2 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Peptidase_M1_N PF17900.1 gi|16081438|ref|NP_393781.1| - 7.7e-31 107.7 0.1 2.2e-30 106.2 0.1 1.8 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Reprolysin_2 PF13574.6 gi|16081438|ref|NP_393781.1| - 0.17 11.8 0.1 0.94 9.3 0.1 2.2 3 0 0 3 3 3 0 Metallo-peptidase family M12B Reprolysin-like Sua5_yciO_yrdC PF01300.18 gi|16081439|ref|NP_393782.1| - 5.8e-52 175.8 0.0 9e-52 175.2 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|16081439|ref|NP_393782.1| - 1.8e-22 80.3 0.0 2.9e-22 79.7 0.0 1.3 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding DUF2064 PF09837.9 gi|16081439|ref|NP_393782.1| - 0.16 11.8 0.0 0.87 9.4 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2064) AIRC PF00731.20 gi|16082510|ref|NP_393783.1| - 4.3e-65 217.8 0.8 4.8e-65 217.7 0.8 1.0 1 0 0 1 1 1 1 AIR carboxylase DUF357 PF04010.13 gi|16081440|ref|NP_393784.1| - 9.9e-29 99.2 0.4 1.2e-28 99.0 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF2528 PF10800.8 gi|16081440|ref|NP_393784.1| - 0.099 13.2 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) Peptidase_M48_N PF16491.5 gi|16081443|ref|NP_393787.1| - 0.41 10.5 8.6 0.15 12.0 6.4 1.4 1 1 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices SnoaL_4 PF13577.6 gi|16081444|ref|NP_393788.1| - 1.1e-07 32.0 1.1 0.4 10.8 0.1 3.4 3 0 0 3 3 3 3 SnoaL-like domain SnoaL_2 PF12680.7 gi|16081444|ref|NP_393788.1| - 0.0017 19.0 0.1 1.1 9.9 0.0 3.3 3 0 0 3 3 3 1 SnoaL-like domain YjbT PF17089.5 gi|16081444|ref|NP_393788.1| - 0.014 15.4 0.3 0.029 14.4 0.3 1.5 1 0 0 1 1 1 0 Uncharacterised protein family DUF3060 PF11259.8 gi|16081444|ref|NP_393788.1| - 2.8 7.7 6.0 7.4 6.3 0.6 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3060) SAICAR_synt PF01259.18 gi|16081445|ref|NP_393789.1| - 4.7e-46 157.4 0.1 6.7e-46 156.9 0.1 1.2 1 0 0 1 1 1 1 SAICAR synthetase URO-D PF01208.17 gi|16081446|ref|NP_393790.1| - 2.6e-92 309.7 0.0 2.9e-92 309.5 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Ferrochelatase PF00762.19 gi|16081447|ref|NP_393791.1| - 8.4e-49 166.4 0.0 9.9e-49 166.1 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase CbiX PF01903.17 gi|16081447|ref|NP_393791.1| - 0.017 15.4 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 0 CbiX dCMP_cyt_deam_1 PF00383.23 gi|16081448|ref|NP_393792.1| - 1.6e-29 101.7 0.9 2.2e-29 101.3 0.9 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|16081448|ref|NP_393792.1| - 9.7e-25 86.9 0.0 1.2e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC_N PF08210.11 gi|16081448|ref|NP_393792.1| - 0.096 12.6 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain Bd3614-deam PF14439.6 gi|16081448|ref|NP_393792.1| - 0.27 11.3 1.6 0.43 10.6 0.4 2.0 2 1 0 2 2 2 0 Bd3614-like deaminase TIM PF00121.18 gi|16081449|ref|NP_393793.1| - 5.4e-14 52.1 0.0 8.7e-13 48.2 0.0 2.0 1 1 1 2 2 2 1 Triosephosphate isomerase IGPS PF00218.21 gi|16081449|ref|NP_393793.1| - 0.00022 20.5 0.0 0.00028 20.1 0.0 1.1 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase ThiG PF05690.14 gi|16081449|ref|NP_393793.1| - 0.00072 18.9 0.1 0.0011 18.4 0.1 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|16081449|ref|NP_393793.1| - 0.00082 18.9 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein FMN_dh PF01070.18 gi|16081449|ref|NP_393793.1| - 0.0035 16.4 1.3 0.0053 15.8 1.3 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Trp_syntA PF00290.20 gi|16081449|ref|NP_393793.1| - 0.011 14.6 0.5 0.022 13.6 0.5 1.4 1 1 0 1 1 1 0 Tryptophan synthase alpha chain Peptidase_C27 PF05407.12 gi|16081449|ref|NP_393793.1| - 0.23 11.5 0.0 0.36 10.9 0.0 1.2 1 0 0 1 1 1 0 Rubella virus endopeptidase Tail_VII PF17091.5 gi|16081450|ref|NP_393794.1| - 0.81 9.6 4.5 0.21 11.5 0.8 1.9 2 0 0 2 2 2 0 Inovirus G7P protein Asn_synthase PF00733.21 gi|16081451|ref|NP_393795.1| - 8.4e-23 81.6 0.5 1.3e-12 48.0 1.2 2.0 1 1 1 2 2 2 2 Asparagine synthase ATP_bind_3 PF01171.20 gi|16081451|ref|NP_393795.1| - 0.035 13.9 0.1 0.062 13.1 0.1 1.5 1 0 0 1 1 1 0 PP-loop family HAD PF12710.7 gi|16081451|ref|NP_393795.1| - 0.035 14.5 0.0 0.053 13.9 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase T2SSE PF00437.20 gi|16081452|ref|NP_393796.1| - 8.3e-10 38.2 0.2 2.8e-09 36.5 0.1 1.9 2 0 0 2 2 2 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|16081452|ref|NP_393796.1| - 1.3e-06 28.1 2.3 1.3e-06 28.1 2.3 2.5 3 0 0 3 3 1 1 KH domain ATP_bind_1 PF03029.17 gi|16081452|ref|NP_393796.1| - 0.00028 20.8 0.0 0.00075 19.3 0.0 1.7 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein KH_4 PF13083.6 gi|16081452|ref|NP_393796.1| - 0.00035 20.4 0.2 0.0021 17.9 0.2 2.4 1 0 0 1 1 1 1 KH domain AAA_16 PF13191.6 gi|16081452|ref|NP_393796.1| - 0.00036 20.9 0.0 0.00073 20.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 gi|16081452|ref|NP_393796.1| - 0.00046 19.2 0.0 0.001 18.1 0.0 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB PIN_4 PF13638.6 gi|16081452|ref|NP_393796.1| - 0.00047 20.4 0.2 0.0018 18.5 0.0 2.1 2 0 0 2 2 2 1 PIN domain AAA_18 PF13238.6 gi|16081452|ref|NP_393796.1| - 0.00061 20.3 0.0 0.003 18.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|16081452|ref|NP_393796.1| - 0.0009 18.7 0.0 0.0024 17.3 0.0 1.7 2 0 0 2 2 1 1 FtsK/SpoIIIE family AAA_29 PF13555.6 gi|16081452|ref|NP_393796.1| - 0.0037 17.0 0.0 0.01 15.6 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|16081452|ref|NP_393796.1| - 0.0048 17.4 0.0 0.046 14.2 0.0 2.3 2 0 0 2 2 2 1 ABC transporter AAA_30 PF13604.6 gi|16081452|ref|NP_393796.1| - 0.0049 16.6 0.1 0.015 15.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|16081452|ref|NP_393796.1| - 0.0068 16.1 0.1 0.027 14.1 0.0 2.0 1 1 1 2 2 2 1 Thymidylate kinase Zeta_toxin PF06414.12 gi|16081452|ref|NP_393796.1| - 0.0083 15.4 0.0 0.017 14.4 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|16081452|ref|NP_393796.1| - 0.0086 16.4 0.0 0.039 14.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|16081452|ref|NP_393796.1| - 0.01 15.6 0.0 0.028 14.2 0.0 1.7 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_5 PF07728.14 gi|16081452|ref|NP_393796.1| - 0.028 14.4 0.0 0.062 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 gi|16081452|ref|NP_393796.1| - 0.033 14.3 0.0 0.082 13.0 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF815 PF05673.13 gi|16081452|ref|NP_393796.1| - 0.049 12.8 0.0 0.091 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|16081452|ref|NP_393796.1| - 0.055 13.6 0.0 0.17 12.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain KH_5 PF13184.6 gi|16081452|ref|NP_393796.1| - 0.069 13.2 3.3 0.069 13.2 0.8 2.4 2 0 0 2 2 1 0 NusA-like KH domain AAA_28 PF13521.6 gi|16081452|ref|NP_393796.1| - 0.074 13.3 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 gi|16081452|ref|NP_393796.1| - 0.075 12.4 0.1 0.19 11.0 0.0 1.8 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain KTI12 PF08433.10 gi|16081452|ref|NP_393796.1| - 0.078 12.4 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_25 PF13481.6 gi|16081452|ref|NP_393796.1| - 0.081 12.5 0.3 0.18 11.3 0.3 1.6 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|16081452|ref|NP_393796.1| - 0.11 12.5 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF2250 PF10007.9 gi|16081453|ref|NP_393797.1| - 4e-35 119.8 9.3 1.9e-33 114.4 7.8 2.2 2 0 0 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2250) Replic_Relax PF13814.6 gi|16081453|ref|NP_393797.1| - 0.0019 18.3 1.6 0.016 15.2 1.6 2.0 1 1 1 2 2 2 1 Replication-relaxation HTH_5 PF01022.20 gi|16081453|ref|NP_393797.1| - 0.0028 17.5 0.4 0.011 15.6 0.0 2.2 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family DUF4423 PF14394.6 gi|16081453|ref|NP_393797.1| - 0.0062 16.3 0.3 0.017 14.8 0.1 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|16081453|ref|NP_393797.1| - 0.022 14.6 0.1 0.19 11.6 0.1 2.3 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB N6_N4_Mtase PF01555.18 gi|16082511|ref|NP_393798.1| - 2.1e-21 76.7 0.1 1.6e-14 54.2 0.0 2.2 2 0 0 2 2 2 2 DNA methylase UPF0020 PF01170.18 gi|16082511|ref|NP_393798.1| - 3e-05 23.8 0.0 5.9e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Met_10 PF02475.16 gi|16082511|ref|NP_393798.1| - 0.0012 18.6 0.0 0.002 17.9 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|16082511|ref|NP_393798.1| - 0.0077 15.9 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MethyltransfD12 PF02086.15 gi|16082511|ref|NP_393798.1| - 0.029 14.1 0.0 0.056 13.1 0.0 1.5 2 0 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_15 PF09445.10 gi|16082511|ref|NP_393798.1| - 0.16 11.5 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Peptidase_A4 PF01828.17 gi|16081454|ref|NP_393799.1| - 6e-07 29.1 0.3 7.4e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 Peptidase A4 family HxlR PF01638.17 gi|16082512|ref|NP_393800.1| - 5.1e-13 48.7 0.0 6.6e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|16082512|ref|NP_393800.1| - 0.0017 18.3 0.0 0.0023 17.9 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|16082512|ref|NP_393800.1| - 0.11 12.8 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DUF2250 PF10007.9 gi|16082512|ref|NP_393800.1| - 0.13 12.4 0.0 0.17 12.0 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HhH-GPD PF00730.25 gi|16081455|ref|NP_393801.1| - 1.4e-17 64.1 0.0 2.3e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.6 gi|16081455|ref|NP_393801.1| - 3.1e-06 27.7 0.1 0.031 14.9 0.0 2.5 1 1 1 2 2 2 2 Helix-hairpin-helix domain Phasin PF05597.11 gi|16081455|ref|NP_393801.1| - 0.18 11.8 0.5 0.31 11.0 0.1 1.5 2 0 0 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) GTP_EFTU PF00009.27 gi|16081456|ref|NP_393802.1| - 5.3e-33 114.2 0.9 2e-32 112.3 0.9 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|16081456|ref|NP_393802.1| - 2.3e-27 95.1 0.1 4.7e-27 94.1 0.1 1.5 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|16081456|ref|NP_393802.1| - 3.5e-05 24.1 0.2 0.0001 22.7 0.2 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|16081456|ref|NP_393802.1| - 0.00015 21.8 0.0 0.00036 20.6 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|16081456|ref|NP_393802.1| - 0.00047 20.1 1.7 0.014 15.3 0.1 2.5 1 1 1 2 2 2 1 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|16081456|ref|NP_393802.1| - 0.0045 17.0 0.1 0.01 15.8 0.1 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|16081456|ref|NP_393802.1| - 0.0098 15.6 1.2 0.71 9.6 0.1 2.5 3 0 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation DUF4124 PF13511.6 gi|16081456|ref|NP_393802.1| - 0.011 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4124) MeaB PF03308.16 gi|16081456|ref|NP_393802.1| - 0.034 13.1 0.4 0.18 10.7 0.0 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB FeoB_N PF02421.18 gi|16081456|ref|NP_393802.1| - 0.091 12.3 0.6 11 5.5 0.1 2.9 1 1 1 2 2 2 0 Ferrous iron transport protein B Ribosomal_S6e PF01092.19 gi|16082513|ref|NP_393803.1| - 4.6e-32 110.6 0.5 5.6e-32 110.3 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e Peptidase_M22 PF00814.25 gi|16081457|ref|NP_393804.1| - 6.7e-80 268.7 0.0 9e-80 268.2 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Kdo PF06293.14 gi|16081457|ref|NP_393804.1| - 1.7e-08 34.1 0.1 2.5e-05 23.8 0.0 2.2 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 gi|16081457|ref|NP_393804.1| - 1.5e-06 28.0 0.1 2.6e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|16081457|ref|NP_393804.1| - 0.001 19.1 0.1 0.24 11.3 0.3 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Carbam_trans_N PF02543.15 gi|16081457|ref|NP_393804.1| - 0.13 11.9 0.0 0.38 10.4 0.0 1.7 2 0 0 2 2 2 0 Carbamoyltransferase N-terminus Pkinase PF00069.25 gi|16081457|ref|NP_393804.1| - 0.16 11.3 0.0 0.31 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein kinase domain Ham1p_like PF01725.16 gi|16081458|ref|NP_393805.1| - 2.9e-45 154.5 0.0 3.4e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DAO PF01266.24 gi|16081459|ref|NP_393806.1| - 4.7e-15 56.0 1.6 5.8e-08 32.7 0.4 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|16081459|ref|NP_393806.1| - 1.6e-13 50.5 0.3 1.2e-12 47.7 0.3 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|16081459|ref|NP_393806.1| - 1.1e-10 41.1 0.5 5.4e-08 32.3 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain GIDA PF01134.22 gi|16081459|ref|NP_393806.1| - 2e-08 33.7 2.9 3.7e-07 29.6 2.9 2.2 1 1 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|16081459|ref|NP_393806.1| - 2.7e-08 32.9 2.3 1e-06 27.8 0.4 2.6 3 0 0 3 3 3 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|16081459|ref|NP_393806.1| - 1.4e-07 31.1 0.2 1.3e-05 24.7 0.1 2.3 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|16081459|ref|NP_393806.1| - 1.6e-07 30.7 0.1 2.9e-07 29.9 0.1 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|16081459|ref|NP_393806.1| - 4.7e-07 29.5 0.3 6.3e-07 29.1 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GMC_oxred_N PF00732.19 gi|16081459|ref|NP_393806.1| - 3.1e-06 26.8 0.1 6.1e-05 22.5 0.1 2.1 2 0 0 2 2 2 1 GMC oxidoreductase NAD_binding_8 PF13450.6 gi|16081459|ref|NP_393806.1| - 3.2e-05 24.1 0.1 7.7e-05 22.8 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|16081459|ref|NP_393806.1| - 3.7e-05 23.1 4.3 0.00044 19.6 4.3 2.2 1 1 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 gi|16081459|ref|NP_393806.1| - 0.00022 20.2 0.5 0.23 10.2 0.1 2.2 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.6 gi|16081459|ref|NP_393806.1| - 0.00025 20.4 1.4 0.0014 18.0 0.7 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16081459|ref|NP_393806.1| - 0.0012 19.4 0.8 0.042 14.4 0.2 3.1 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|16081459|ref|NP_393806.1| - 0.0013 18.1 0.0 0.44 9.8 0.0 2.4 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|16081459|ref|NP_393806.1| - 0.079 12.9 1.7 0.71 9.9 0.2 2.5 2 1 1 3 3 3 0 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|16081459|ref|NP_393806.1| - 0.11 12.3 0.3 0.26 11.1 0.2 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|16081459|ref|NP_393806.1| - 0.15 11.7 0.2 0.35 10.5 0.2 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ETF_QO PF05187.13 gi|16081460|ref|NP_393807.1| - 3.2e-07 30.4 4.7 4.1e-07 30.1 4.7 1.3 1 1 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_2 PF12797.7 gi|16081460|ref|NP_393807.1| - 1.2e-06 28.3 14.0 0.00018 21.4 4.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|16081460|ref|NP_393807.1| - 1.6e-05 24.9 11.2 2.5e-05 24.3 11.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16081460|ref|NP_393807.1| - 5e-05 23.8 12.0 0.022 15.3 14.4 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16081460|ref|NP_393807.1| - 6e-05 22.9 16.7 0.0031 17.5 7.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|16081460|ref|NP_393807.1| - 0.00014 22.0 11.8 0.00019 21.5 11.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081460|ref|NP_393807.1| - 0.00063 19.8 14.1 0.03 14.4 3.1 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16081460|ref|NP_393807.1| - 0.0008 19.1 18.2 0.015 15.1 1.9 3.2 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_4 PF12800.7 gi|16081460|ref|NP_393807.1| - 0.7 10.6 14.3 0.26 11.9 1.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|16081460|ref|NP_393807.1| - 1.2 9.8 13.5 0.34 11.5 4.7 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|16081460|ref|NP_393807.1| - 8 7.5 14.3 11 7.0 2.9 2.3 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain ETF PF01012.21 gi|16081461|ref|NP_393808.1| - 8.6e-44 149.6 0.1 1.1e-43 149.2 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain RecO_N_2 PF13114.6 gi|16081461|ref|NP_393808.1| - 0.11 12.2 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 RecO N terminal ETF PF01012.21 gi|16081462|ref|NP_393809.1| - 5e-37 127.5 0.0 6.8e-37 127.1 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|16081462|ref|NP_393809.1| - 5.1e-33 113.0 0.1 1.9e-32 111.1 0.1 1.9 2 0 0 2 2 2 1 Electron transfer flavoprotein FAD-binding domain tRNA-synt_2b PF00587.25 gi|16081463|ref|NP_393810.1| - 1.2e-31 110.1 0.0 2.2e-31 109.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|16081463|ref|NP_393810.1| - 6.9e-16 58.2 0.2 2.2e-15 56.6 0.2 1.9 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 gi|16081463|ref|NP_393810.1| - 1.6e-13 50.5 0.0 4.3e-13 49.1 0.0 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Zn-ribbon_8 PF09723.10 gi|16081463|ref|NP_393810.1| - 0.0035 17.4 1.3 0.0077 16.3 1.3 1.5 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|16081463|ref|NP_393810.1| - 0.0041 17.1 0.0 0.0087 16.1 0.0 1.5 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF356 PF04009.12 gi|16081463|ref|NP_393810.1| - 0.039 14.2 0.5 0.82 10.0 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF356) FtsH_ext PF06480.15 gi|16081463|ref|NP_393810.1| - 0.069 13.5 0.5 11 6.5 0.0 3.4 4 0 0 4 4 4 0 FtsH Extracellular TF_Zn_Ribbon PF08271.12 gi|16081463|ref|NP_393810.1| - 0.17 11.4 0.7 10 5.8 0.0 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|16081463|ref|NP_393810.1| - 2.3 8.0 5.5 7.2 6.4 5.5 1.8 1 1 0 1 1 1 0 Rubredoxin metal binding domain PNP_UDP_1 PF01048.20 gi|16081464|ref|NP_393811.1| - 1.6e-45 155.2 0.0 2e-45 154.9 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Beta-Casp PF10996.8 gi|16081465|ref|NP_393812.1| - 9.9e-13 48.3 0.0 2e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|16081465|ref|NP_393812.1| - 1.6e-12 47.2 0.0 3.6e-12 46.0 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|16081465|ref|NP_393812.1| - 6.8e-10 38.7 0.0 1.1e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|16081465|ref|NP_393812.1| - 4.8e-09 36.5 0.1 1e-08 35.5 0.1 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|16081465|ref|NP_393812.1| - 4.8e-08 32.8 0.0 9.5e-07 28.5 0.0 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|16081465|ref|NP_393812.1| - 0.0028 17.5 0.1 0.0074 16.2 0.1 1.9 2 1 0 2 2 2 1 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|16081465|ref|NP_393812.1| - 0.014 14.5 0.1 0.023 13.8 0.1 1.3 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II Sugar_tr PF00083.24 gi|16081466|ref|NP_393813.1| - 1.5e-57 195.5 32.2 1.8e-57 195.2 32.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081466|ref|NP_393813.1| - 4.7e-35 121.1 46.6 4.9e-28 98.1 19.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|16081466|ref|NP_393813.1| - 0.12 11.2 28.2 0.054 12.3 11.7 3.3 2 2 2 4 4 4 0 MFS_1 like family YtxH PF12732.7 gi|16081466|ref|NP_393813.1| - 0.91 10.1 3.4 4.3 7.9 0.2 3.0 3 0 0 3 3 3 0 YtxH-like protein NTP_transferase PF00483.23 gi|16081467|ref|NP_393814.1| - 2.2e-24 86.4 0.0 2.6e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|16081467|ref|NP_393814.1| - 3.1e-07 30.9 0.0 4.6e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Asparaginase_2 PF01112.18 gi|16081470|ref|NP_393817.1| - 4.5e-59 200.0 0.0 5.8e-59 199.6 0.0 1.1 1 0 0 1 1 1 1 Asparaginase ATP-gua_PtransN PF02807.15 gi|16081470|ref|NP_393817.1| - 0.13 12.7 0.0 0.28 11.6 0.0 1.5 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain Glyco_hydro_57 PF03065.15 gi|16082514|ref|NP_393818.1| - 3.5e-67 226.9 0.8 4.8e-67 226.5 0.8 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|16082514|ref|NP_393818.1| - 4.3e-06 26.6 0.0 7.1e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_transf_4 PF13439.6 gi|16081471|ref|NP_393819.1| - 1.3e-25 90.4 0.0 2.1e-25 89.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|16081471|ref|NP_393819.1| - 1.7e-24 86.3 0.0 2.5e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16081471|ref|NP_393819.1| - 3.3e-21 76.1 0.0 4.8e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|16081471|ref|NP_393819.1| - 2.5e-18 67.0 0.0 4.2e-18 66.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|16081471|ref|NP_393819.1| - 1.9e-10 40.9 0.0 8.7e-09 35.4 0.0 2.5 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.6 gi|16081471|ref|NP_393819.1| - 0.0012 19.1 0.0 0.0028 18.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 GDE_C PF06202.14 gi|16081472|ref|NP_393820.1| - 3.1e-114 381.9 0.0 4.2e-114 381.4 0.0 1.1 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|16081472|ref|NP_393820.1| - 1.8e-51 174.7 0.0 2.7e-51 174.1 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal Glyco_hydro_100 PF12899.7 gi|16081472|ref|NP_393820.1| - 2.1e-06 26.7 0.1 0.036 12.7 0.0 2.3 2 1 0 2 2 2 2 Alkaline and neutral invertase Bac_rhamnosid6H PF17389.2 gi|16081472|ref|NP_393820.1| - 0.033 13.5 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Peptidase_C57 PF03290.13 gi|16081472|ref|NP_393820.1| - 0.11 11.2 0.0 0.18 10.5 0.0 1.2 1 0 0 1 1 1 0 Vaccinia virus I7 processing peptidase Glyco_hydro_15 PF00723.21 gi|16081473|ref|NP_393821.1| - 2.5e-24 85.9 1.3 2e-19 69.7 1.9 2.8 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Bac_rhamnosid6H PF17389.2 gi|16081473|ref|NP_393821.1| - 1.8e-05 24.2 2.5 1.8e-05 24.2 2.5 2.1 2 1 0 2 2 2 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF608 PF04685.13 gi|16081473|ref|NP_393821.1| - 3.2e-05 23.3 1.0 5.5e-05 22.5 1.0 1.4 1 1 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Trehalase PF01204.18 gi|16081473|ref|NP_393821.1| - 0.0032 16.3 0.0 0.92 8.2 0.0 2.1 2 0 0 2 2 2 2 Trehalase Epimerase PF01370.21 gi|16081474|ref|NP_393822.1| - 9.3e-37 126.8 0.1 1.2e-36 126.5 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|16081474|ref|NP_393822.1| - 1e-28 100.7 2.0 3e-28 99.2 2.0 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|16081474|ref|NP_393822.1| - 6.9e-07 28.5 0.2 3.7e-06 26.2 0.2 2.0 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|16081474|ref|NP_393822.1| - 4.4e-05 22.7 0.0 9.3e-05 21.7 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|16081474|ref|NP_393822.1| - 4.7e-05 22.7 0.2 0.65 9.1 0.0 3.0 2 1 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|16081474|ref|NP_393822.1| - 0.00015 21.0 0.2 0.0054 15.9 0.2 2.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein GHMP_kinases_N PF00288.26 gi|16082515|ref|NP_393823.1| - 4.9e-11 42.7 0.1 9.3e-11 41.8 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|16082515|ref|NP_393823.1| - 4.4e-10 39.8 0.1 1.5e-09 38.1 0.0 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal GntR PF00392.21 gi|16082515|ref|NP_393823.1| - 0.049 13.3 0.7 0.65 9.7 0.0 2.6 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family GalKase_gal_bdg PF10509.9 gi|16082515|ref|NP_393823.1| - 0.15 11.7 0.2 0.33 10.5 0.2 1.7 1 1 0 1 1 1 0 Galactokinase galactose-binding signature PadR PF03551.14 gi|16081476|ref|NP_393825.1| - 1.9e-14 53.3 0.0 2.8e-14 52.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|16081476|ref|NP_393825.1| - 6.1e-05 23.6 0.1 7.6e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Replication terminator protein HTH_34 PF13601.6 gi|16081476|ref|NP_393825.1| - 0.00063 19.9 0.0 0.00092 19.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|16081476|ref|NP_393825.1| - 0.062 13.0 0.2 0.087 12.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF3834 PF12916.7 gi|16081477|ref|NP_393826.1| - 3.5e-80 268.0 0.1 3.9e-80 267.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) Multi_ubiq PF14452.6 gi|16081477|ref|NP_393826.1| - 0.02 15.2 0.0 0.049 13.9 0.0 1.6 1 0 0 1 1 1 0 Multiubiquitin SBP_bac_3 PF00497.20 gi|16081477|ref|NP_393826.1| - 0.035 13.5 0.0 0.041 13.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 MFS_1 PF07690.16 gi|16081478|ref|NP_393827.1| - 1.1e-19 70.7 55.1 1.6e-12 47.0 29.8 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|16081478|ref|NP_393827.1| - 0.00015 20.3 2.4 0.00015 20.3 2.4 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector AA_permease_2 PF13520.6 gi|16082516|ref|NP_393828.1| - 7.7e-34 117.2 65.0 1.4e-33 116.4 65.0 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16082516|ref|NP_393828.1| - 4.7e-15 55.2 56.2 4.7e-15 55.2 56.2 1.9 1 1 1 2 2 2 1 Amino acid permease ACT_7 PF13840.6 gi|16081479|ref|NP_393829.1| - 0.00035 20.3 0.1 0.00035 20.3 0.1 2.4 3 0 0 3 3 3 1 ACT domain FlaG PF03646.15 gi|16081479|ref|NP_393829.1| - 0.00081 19.5 0.1 0.0015 18.7 0.1 1.4 1 0 0 1 1 1 1 FlaG protein Methyltransf_17 PF12692.7 gi|16081479|ref|NP_393829.1| - 0.033 14.2 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase T2SSE_N PF05157.15 gi|16081479|ref|NP_393829.1| - 0.047 14.0 0.0 0.12 12.7 0.0 1.6 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein E, N-terminal domain Thiolase_C PF02803.18 gi|16081480|ref|NP_393830.1| - 2.8e-10 39.9 0.0 1e-08 34.8 0.0 2.3 2 0 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 gi|16081480|ref|NP_393830.1| - 4.3e-08 32.8 0.4 9.3e-07 28.5 0.4 2.2 1 1 0 1 1 1 1 Thiolase, N-terminal domain OB_aCoA_assoc PF01796.17 gi|16081481|ref|NP_393831.1| - 1.5e-13 50.5 0.0 2.3e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|16081481|ref|NP_393831.1| - 1.3e-08 34.5 0.5 2e-08 33.9 0.5 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DiS_P_DiS PF06750.13 gi|16081481|ref|NP_393831.1| - 0.093 12.9 3.0 0.64 10.2 2.9 2.0 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain YhfH PF14149.6 gi|16081481|ref|NP_393831.1| - 4.1 7.5 8.3 4.8 7.3 2.8 2.9 1 1 1 2 2 2 0 YhfH-like protein NUDIX PF00293.28 gi|16081482|ref|NP_393832.1| - 2.9e-14 53.2 0.0 4.1e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|16081482|ref|NP_393832.1| - 0.2 11.7 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 NUDIX domain DUF3198 PF11433.8 gi|16081483|ref|NP_393833.1| - 5.7e-26 90.2 0.6 7.8e-26 89.7 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3198) DUF4052 PF13261.6 gi|16081483|ref|NP_393833.1| - 0.0025 17.7 2.4 0.003 17.4 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4052) CytochromB561_N PF09786.9 gi|16081483|ref|NP_393833.1| - 0.12 11.3 1.1 0.13 11.2 1.1 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Spermine_synth PF01564.17 gi|16081484|ref|NP_393834.1| - 2.5e-51 173.8 0.0 3.6e-51 173.3 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|16081484|ref|NP_393834.1| - 6.6e-15 54.7 0.1 1.1e-14 54.0 0.1 1.4 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_30 PF05430.11 gi|16081484|ref|NP_393834.1| - 0.063 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase DS PF01916.17 gi|16081485|ref|NP_393835.1| - 6.1e-106 353.9 0.0 7e-106 353.7 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase AhpC-TSA PF00578.21 gi|16081486|ref|NP_393836.1| - 6e-46 155.4 0.1 7e-46 155.2 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|16081486|ref|NP_393836.1| - 3.8e-29 101.3 0.2 4.4e-29 101.1 0.2 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|16081486|ref|NP_393836.1| - 4.3e-06 26.7 0.0 6.3e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 SCO1/SenC Thioredoxin_8 PF13905.6 gi|16081486|ref|NP_393836.1| - 4.9e-06 26.8 0.0 7.8e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA_2 PF13911.6 gi|16081486|ref|NP_393836.1| - 0.00041 20.4 0.0 0.0011 19.0 0.0 1.7 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme Glyco_transf_15 PF01793.16 gi|16081486|ref|NP_393836.1| - 0.069 12.4 0.0 0.071 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycolipid 2-alpha-mannosyltransferase Ribosomal_60s PF00428.19 gi|16081487|ref|NP_393837.1| - 4e-20 72.2 14.3 5e-20 71.9 14.3 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein TAFII55_N PF04658.13 gi|16081487|ref|NP_393837.1| - 0.0062 16.3 1.4 0.0075 16.0 1.4 1.2 1 0 0 1 1 1 1 TAFII55 protein conserved region Sigma70_ner PF04546.13 gi|16081487|ref|NP_393837.1| - 0.008 16.1 5.5 0.01 15.8 5.5 1.2 1 0 0 1 1 1 1 Sigma-70, non-essential region YceD PF02620.17 gi|16081487|ref|NP_393837.1| - 0.046 13.8 4.1 0.055 13.6 4.1 1.1 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD EF-hand_14 PF17959.1 gi|16081487|ref|NP_393837.1| - 0.049 14.0 2.1 0.1 13.0 2.1 1.7 1 1 0 1 1 1 0 EF-hand domain DUF3391 PF11871.8 gi|16081487|ref|NP_393837.1| - 0.068 13.7 4.4 0.078 13.5 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) DUF3824 PF12868.7 gi|16081487|ref|NP_393837.1| - 0.075 13.7 4.2 0.1 13.2 4.2 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) TMEM214 PF10151.9 gi|16081487|ref|NP_393837.1| - 0.26 9.7 5.8 0.29 9.5 5.8 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator PhetRS_B1 PF18262.1 gi|16081487|ref|NP_393837.1| - 0.44 10.8 4.6 1.4 9.1 4.6 2.0 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain YqfQ PF14181.6 gi|16081487|ref|NP_393837.1| - 0.47 10.6 5.6 0.59 10.3 5.6 1.2 1 0 0 1 1 1 0 YqfQ-like protein EIIBC-GUT_N PF03612.14 gi|16081487|ref|NP_393837.1| - 0.95 9.2 5.0 0.93 9.2 4.7 1.2 1 1 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Cytomega_UL84 PF06284.11 gi|16081487|ref|NP_393837.1| - 1.4 7.3 5.9 1.6 7.1 5.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein DUF3408 PF11888.8 gi|16081487|ref|NP_393837.1| - 4.3 7.5 11.7 7.8 6.6 11.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3408) Ribosomal_L10 PF00466.20 gi|16081488|ref|NP_393838.1| - 3.3e-22 78.5 1.3 9.3e-22 77.1 1.3 1.8 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|16081488|ref|NP_393838.1| - 9.8e-21 73.5 0.3 2.8e-20 72.1 0.3 1.8 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|16081488|ref|NP_393838.1| - 3.2 8.4 10.4 2.6 8.7 7.6 2.5 1 1 1 2 2 2 0 60s Acidic ribosomal protein Ribosomal_L1 PF00687.21 gi|16081489|ref|NP_393839.1| - 3.5e-45 154.3 0.5 4.2e-45 154.0 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family DUF4317 PF14199.6 gi|16081489|ref|NP_393839.1| - 0.039 13.1 0.0 0.067 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4317) Ribosomal_L11_N PF03946.14 gi|16081490|ref|NP_393840.1| - 1.8e-23 82.1 1.5 1.8e-23 82.1 1.5 1.9 2 1 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|16081490|ref|NP_393840.1| - 2.9e-20 72.5 1.5 5.8e-20 71.6 1.5 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain HlyD PF00529.20 gi|16081490|ref|NP_393840.1| - 0.17 11.8 0.4 0.33 10.9 0.1 1.5 2 0 0 2 2 2 0 HlyD membrane-fusion protein of T1SS Endopep_inhib PF16800.5 gi|16081491|ref|NP_393841.1| - 0.13 12.2 0.9 2.8 7.9 0.3 2.5 2 1 0 2 2 2 0 IseA DL-endopeptidase inhibitor Semialdhyde_dhC PF02774.18 gi|16081492|ref|NP_393842.1| - 3.2e-26 92.6 0.0 4.8e-26 92.0 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|16081492|ref|NP_393842.1| - 1.4e-24 86.9 0.0 3e-24 85.8 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 gi|16081492|ref|NP_393842.1| - 0.17 11.5 0.0 0.97 9.0 0.0 2.0 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AA_kinase PF00696.28 gi|16081493|ref|NP_393843.1| - 3.3e-40 138.2 0.1 3.9e-40 138.0 0.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family Phage_integrase PF00589.22 gi|16081494|ref|NP_393844.1| - 3.1e-05 23.8 0.0 8.4e-05 22.4 0.0 1.7 1 0 0 1 1 1 1 Phage integrase family T6PP_N PF18572.1 gi|16081494|ref|NP_393844.1| - 0.025 14.4 0.0 0.11 12.4 0.0 2.1 1 0 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain AAA_16 PF13191.6 gi|16081496|ref|NP_393846.1| - 1.3e-05 25.6 0.0 3.8e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|16081496|ref|NP_393846.1| - 2.7e-05 24.2 0.9 0.0045 17.0 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|16081496|ref|NP_393846.1| - 6e-05 23.3 0.0 0.11 12.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|16081496|ref|NP_393846.1| - 0.0028 17.6 0.6 0.0028 17.6 0.6 2.3 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea FtsK_SpoIIIE PF01580.18 gi|16081496|ref|NP_393846.1| - 0.0056 16.1 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family ResIII PF04851.15 gi|16081496|ref|NP_393846.1| - 0.0061 16.6 2.0 0.69 9.9 0.1 3.5 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit DUF87 PF01935.17 gi|16081496|ref|NP_393846.1| - 0.01 15.9 1.0 0.03 14.4 0.1 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain MobB PF03205.14 gi|16081496|ref|NP_393846.1| - 0.087 12.7 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Nitroreductase PF00881.24 gi|16081500|ref|NP_393850.1| - 1.2e-05 25.4 0.0 3.1e-05 24.1 0.0 1.7 1 1 0 1 1 1 1 Nitroreductase family Nitroreductase PF00881.24 gi|16081501|ref|NP_393851.1| - 2.8e-20 73.1 0.0 3.7e-20 72.7 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family MFS_1 PF07690.16 gi|16081502|ref|NP_393852.1| - 1.1e-19 70.6 35.1 5.9e-19 68.2 27.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Acetyltransf_1 PF00583.25 gi|16081503|ref|NP_393853.1| - 6.5e-14 52.2 0.2 7.8e-14 51.9 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16081503|ref|NP_393853.1| - 8.9e-14 51.5 0.0 1.1e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16081503|ref|NP_393853.1| - 1.1e-08 35.4 0.1 1.5e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|16081503|ref|NP_393853.1| - 0.00096 19.8 0.0 0.0011 19.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|16081504|ref|NP_393854.1| - 1.2e-15 57.6 0.1 1.5e-15 57.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|16081504|ref|NP_393854.1| - 1.6e-14 54.1 0.0 2e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|16081504|ref|NP_393854.1| - 5.7e-10 39.5 0.1 7.5e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081504|ref|NP_393854.1| - 4.2e-06 26.6 0.0 5.8e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 gi|16081504|ref|NP_393854.1| - 5.5e-05 22.9 0.0 6.7e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_3 PF13302.7 gi|16081504|ref|NP_393854.1| - 0.0013 19.4 0.0 0.0015 19.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16081504|ref|NP_393854.1| - 0.0022 18.1 0.4 0.003 17.7 0.4 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain IlvC PF01450.19 gi|16081504|ref|NP_393854.1| - 0.065 13.5 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Acetyltransf_9 PF13527.7 gi|16081504|ref|NP_393854.1| - 0.07 13.2 0.2 2 8.5 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain RuvB_C PF05491.13 gi|16082643|ref|NP_393855.1| - 0.0085 15.9 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain DUF3781 PF12636.7 gi|16082643|ref|NP_393855.1| - 0.13 12.2 2.0 0.34 10.8 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3781) Pro-kuma_activ PF09286.11 gi|16081505|ref|NP_393856.1| - 4.6e-17 62.6 0.0 1e-16 61.5 0.0 1.6 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain AAA_13 PF13166.6 gi|16081505|ref|NP_393856.1| - 0.31 9.6 0.6 0.45 9.1 0.6 1.1 1 0 0 1 1 1 0 AAA domain Peptidase_S24 PF00717.23 gi|16081507|ref|NP_393858.1| - 0.032 14.2 0.1 0.058 13.3 0.1 1.4 1 0 0 1 1 1 0 Peptidase S24-like DDE_Tnp_1 PF01609.21 gi|16081508|ref|NP_393859.1| - 8.1e-06 25.6 0.1 1.7e-05 24.6 0.1 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_4 PF13359.6 gi|16081508|ref|NP_393859.1| - 0.0029 17.3 0.0 0.0032 17.2 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Peptidase_C25_C PF03785.14 gi|16081509|ref|NP_393860.1| - 0.0058 16.4 0.4 0.0058 16.4 0.4 2.0 2 1 0 2 2 2 1 Peptidase family C25, C terminal ig-like domain OrfB_IS605 PF01385.19 gi|16081510|ref|NP_393861.1| - 2.9e-07 30.7 0.2 3.4e-07 30.5 0.2 1.1 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|16081511|ref|NP_393862.1| - 0.018 14.9 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HTH_45 PF14947.6 gi|16081514|ref|NP_393865.1| - 4.5e-13 49.0 0.5 5.3e-13 48.8 0.5 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|16081514|ref|NP_393865.1| - 0.0011 18.7 0.1 0.0013 18.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rrf2 PF02082.20 gi|16081514|ref|NP_393865.1| - 0.062 13.6 0.0 0.085 13.2 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Ribosomal_S19e PF01090.19 gi|16081514|ref|NP_393865.1| - 0.098 12.4 0.0 0.4 10.4 0.0 1.8 1 1 0 1 1 1 0 Ribosomal protein S19e HTH_45 PF14947.6 gi|16081515|ref|NP_393866.1| - 3.5e-09 36.5 0.2 6.1e-09 35.8 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix bPH_5 PF10882.8 gi|16081515|ref|NP_393866.1| - 0.048 13.7 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial PH domain DUF1829 PF08862.10 gi|16081515|ref|NP_393866.1| - 0.12 12.8 0.3 0.3 11.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function DUF1829 tRNA_anti-codon PF01336.25 gi|16081516|ref|NP_393867.1| - 1.6e-09 37.6 9.0 0.01 15.8 0.3 4.1 4 1 0 4 4 4 3 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.25 gi|16081517|ref|NP_393868.1| - 0.0024 17.8 0.0 0.0043 17.0 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|16081517|ref|NP_393868.1| - 0.023 14.5 0.0 0.038 13.8 0.0 1.3 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 TrmB PF01978.19 gi|16081517|ref|NP_393868.1| - 0.074 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RPA_C PF08784.11 gi|16081517|ref|NP_393868.1| - 0.18 12.5 0.0 0.32 11.7 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal RNA_pol_Rpb5_C PF01191.19 gi|16081518|ref|NP_393869.1| - 7.4e-29 99.4 0.7 8.9e-29 99.2 0.7 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain PGBA_N PF15436.6 gi|16081518|ref|NP_393869.1| - 0.054 13.1 0.1 0.065 12.9 0.1 1.2 1 1 0 1 1 1 0 Plasminogen-binding protein pgbA N-terminal RNA_pol_Rpb2_6 PF00562.28 gi|16081519|ref|NP_393870.1| - 4.5e-128 427.6 0.0 6.3e-128 427.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|16081519|ref|NP_393870.1| - 1e-33 116.6 0.0 2.8e-32 111.9 0.0 2.2 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 gi|16081519|ref|NP_393870.1| - 6.1e-26 90.4 0.1 1.7e-25 89.0 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.20 gi|16081519|ref|NP_393870.1| - 2.1e-25 89.0 0.0 4.4e-25 87.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 gi|16081519|ref|NP_393870.1| - 1.2e-22 80.5 0.0 2.4e-22 79.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_4 PF04566.13 gi|16081519|ref|NP_393870.1| - 5.1e-20 71.5 0.9 1.2e-19 70.3 0.9 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|16081519|ref|NP_393870.1| - 1.3e-13 51.3 0.5 2.7e-13 50.2 0.5 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 zf-RRN7 PF11781.8 gi|16081519|ref|NP_393870.1| - 0.095 12.4 0.8 7 6.4 0.0 2.6 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TackOD1 PF18551.1 gi|16081519|ref|NP_393870.1| - 0.44 10.2 2.9 0.48 10.1 0.2 2.0 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 IBR PF01485.21 gi|16081519|ref|NP_393870.1| - 0.49 10.7 1.7 6.1 7.1 0.1 2.3 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain Cys_rich_CPXG PF14255.6 gi|16081519|ref|NP_393870.1| - 0.52 10.3 2.3 1.2 9.1 0.2 2.5 2 0 0 2 2 2 0 Cysteine-rich CPXCG Zn_Tnp_IS1595 PF12760.7 gi|16081519|ref|NP_393870.1| - 0.84 9.7 4.0 4.1 7.5 0.2 2.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf_CopZ PF18423.1 gi|16081519|ref|NP_393870.1| - 2.8 8.0 4.0 39 4.3 0.0 3.2 3 0 0 3 3 3 0 Zinc binding domain TF_Zn_Ribbon PF08271.12 gi|16081519|ref|NP_393870.1| - 6.9 6.3 9.1 1.9 8.0 1.7 2.7 2 0 0 2 2 2 0 TFIIB zinc-binding DNA_ligase_ZBD PF03119.16 gi|16081519|ref|NP_393870.1| - 7 6.8 5.9 67 3.6 0.8 3.4 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain RNA_pol_Rpb1_1 PF04997.12 gi|16081520|ref|NP_393871.1| - 1.6e-99 333.2 0.0 2e-99 332.8 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|16081520|ref|NP_393871.1| - 2.6e-62 209.9 0.1 4.2e-62 209.2 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|16081520|ref|NP_393871.1| - 7.4e-29 100.7 0.0 1.4e-28 99.8 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|16081520|ref|NP_393871.1| - 1.9e-24 86.5 0.2 5.4e-24 85.1 0.1 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.17 gi|16081520|ref|NP_393871.1| - 3.3e-23 81.7 0.0 6.5e-23 80.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 zf-ribbon_3 PF13248.6 gi|16081520|ref|NP_393871.1| - 0.26 10.7 3.9 0.58 9.6 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16081520|ref|NP_393871.1| - 0.53 10.4 2.2 10 6.4 0.0 3.1 3 0 0 3 3 3 0 Zinc ribbon domain RNA_pol_Rpb1_5 PF04998.17 gi|16081521|ref|NP_393872.1| - 1.7e-57 194.9 1.7 2.4e-57 194.4 1.7 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 KH_5 PF13184.6 gi|16082517|ref|NP_393873.1| - 6.7e-09 35.7 3.9 6.2e-06 26.2 0.4 2.3 2 0 0 2 2 2 2 NusA-like KH domain KH_4 PF13083.6 gi|16082517|ref|NP_393873.1| - 2.1e-07 30.7 0.0 4.6e-07 29.6 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|16082517|ref|NP_393873.1| - 0.00066 19.5 1.0 0.00066 19.5 1.0 2.1 1 1 1 2 2 2 1 KH domain KH_1 PF00013.29 gi|16082517|ref|NP_393873.1| - 0.0016 18.2 1.7 0.0053 16.6 0.2 2.4 2 1 1 3 3 3 1 KH domain NAD_Gly3P_dh_N PF01210.23 gi|16082517|ref|NP_393873.1| - 0.027 14.4 0.2 0.049 13.6 0.1 1.6 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus eIF-1a PF01176.19 gi|16082644|ref|NP_393874.1| - 1.5e-22 79.2 0.3 2.6e-22 78.4 0.2 1.4 2 0 0 2 2 2 1 Translation initiation factor 1A / IF-1 RIO1 PF01163.22 gi|16082518|ref|NP_393875.1| - 1.2e-60 204.4 0.9 1.6e-60 203.9 0.9 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|16082518|ref|NP_393875.1| - 0.00038 20.5 0.1 0.0091 15.9 0.1 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.25 gi|16082518|ref|NP_393875.1| - 0.00092 18.7 2.1 0.0064 15.9 2.1 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 gi|16082518|ref|NP_393875.1| - 0.0037 16.1 0.3 0.0057 15.5 0.1 1.5 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 gi|16082518|ref|NP_393875.1| - 0.0094 15.3 0.1 0.99 8.7 0.0 2.1 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 gi|16082518|ref|NP_393875.1| - 0.031 13.8 0.1 9.6 5.7 0.1 2.4 1 1 1 2 2 2 0 Choline/ethanolamine kinase KH_1 PF00013.29 gi|16081522|ref|NP_393876.1| - 2.6e-10 40.0 7.0 8e-06 25.6 1.2 2.5 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|16081522|ref|NP_393876.1| - 0.025 14.4 5.8 0.11 12.3 0.5 2.9 2 1 1 3 3 3 0 KH domain KH_4 PF13083.6 gi|16081522|ref|NP_393876.1| - 0.63 10.0 4.0 5.4 7.0 0.1 3.0 2 1 1 3 3 3 0 KH domain Acyl-CoA_dh_1 PF00441.24 gi|16081523|ref|NP_393877.1| - 1.6e-32 112.8 0.5 3e-32 111.9 0.5 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|16081523|ref|NP_393877.1| - 9.1e-23 81.1 0.0 2.3e-22 79.8 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16081523|ref|NP_393877.1| - 3.1e-15 56.1 0.0 8e-15 54.8 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|16081523|ref|NP_393877.1| - 2.5e-08 34.3 0.0 4.6e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Pyrophosphatase PF00719.19 gi|16081524|ref|NP_393878.1| - 1.9e-53 180.6 0.4 2.2e-53 180.4 0.4 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase SRP_TPR_like PF17004.5 gi|16081526|ref|NP_393880.1| - 0.00092 19.2 0.1 0.0025 17.8 0.1 1.7 1 0 0 1 1 1 1 Putative TPR-like repeat TPR_14 PF13428.6 gi|16081526|ref|NP_393880.1| - 0.0091 16.7 0.9 5.1 8.2 0.1 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat SPOB_a PF14689.6 gi|16081526|ref|NP_393880.1| - 0.13 12.0 0.3 0.32 10.7 0.3 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain TPR_12 PF13424.6 gi|16081527|ref|NP_393881.1| - 1.7e-13 50.6 15.0 1.4e-06 28.5 0.1 6.4 5 1 2 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|16081527|ref|NP_393881.1| - 1.5e-12 47.8 1.9 0.0051 17.3 0.1 5.3 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 gi|16081527|ref|NP_393881.1| - 1.7e-12 46.4 25.2 0.0088 16.1 0.1 9.0 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16081527|ref|NP_393881.1| - 2.6e-08 34.0 0.6 0.039 14.8 0.0 6.6 7 0 0 7 7 6 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|16081527|ref|NP_393881.1| - 3.7e-08 33.5 5.7 0.15 12.3 0.1 4.8 3 1 0 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 gi|16081527|ref|NP_393881.1| - 1.8e-07 30.8 6.4 0.054 13.2 0.2 5.5 5 0 0 5 5 4 1 TPR repeat TPR_8 PF13181.6 gi|16081527|ref|NP_393881.1| - 4.7e-07 29.5 15.8 0.69 10.3 0.1 7.8 9 0 0 9 9 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|16081527|ref|NP_393881.1| - 9.1e-05 23.0 6.6 0.18 12.5 0.2 5.6 3 1 4 7 7 6 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|16081527|ref|NP_393881.1| - 0.00014 21.5 21.9 0.0026 17.5 0.2 7.7 9 0 0 9 9 8 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|16081527|ref|NP_393881.1| - 0.00023 20.7 0.0 1.7 8.0 0.0 3.5 2 1 1 3 3 3 1 MalT-like TPR region TPR_10 PF13374.6 gi|16081527|ref|NP_393881.1| - 0.0003 20.5 13.1 0.021 14.7 0.2 6.4 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|16081527|ref|NP_393881.1| - 0.00073 19.4 7.6 8.1 6.7 0.1 6.5 6 0 0 6 6 6 0 Tetratricopeptide repeat PPR PF01535.20 gi|16081527|ref|NP_393881.1| - 0.00075 19.6 4.0 6.3 7.3 0.1 6.2 8 0 0 8 8 4 0 PPR repeat RPN7 PF10602.9 gi|16081527|ref|NP_393881.1| - 0.00083 19.1 8.8 0.11 12.2 0.1 3.8 2 2 1 3 3 3 2 26S proteasome subunit RPN7 TPR_6 PF13174.6 gi|16081527|ref|NP_393881.1| - 0.00087 19.8 15.4 2.6 8.9 0.0 6.6 8 0 0 8 8 4 1 Tetratricopeptide repeat MarR_2 PF12802.7 gi|16081527|ref|NP_393881.1| - 0.0011 18.8 0.0 0.0088 15.9 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|16081527|ref|NP_393881.1| - 0.0019 18.6 0.5 0.16 12.5 0.0 4.1 5 1 1 6 6 3 1 Winged helix DNA-binding domain TPR_21 PF09976.9 gi|16081527|ref|NP_393881.1| - 0.0022 17.8 2.7 0.0068 16.1 0.2 2.8 2 1 1 3 3 3 1 Tetratricopeptide repeat-like domain HTH_47 PF16221.5 gi|16081527|ref|NP_393881.1| - 0.0031 17.1 0.0 0.012 15.2 0.1 2.0 2 0 0 2 2 1 1 winged helix-turn-helix MarR PF01047.22 gi|16081527|ref|NP_393881.1| - 0.004 17.0 0.2 0.014 15.3 0.1 2.1 2 0 0 2 2 1 1 MarR family HrpB1_HrpK PF09613.10 gi|16081527|ref|NP_393881.1| - 0.0076 15.9 0.0 16 5.1 0.0 3.4 2 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_20 PF14561.6 gi|16081527|ref|NP_393881.1| - 0.031 14.6 0.0 2.3 8.6 0.1 3.9 2 1 1 3 3 3 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|16081527|ref|NP_393881.1| - 0.055 13.5 0.3 0.055 13.5 0.3 4.8 4 2 1 5 5 4 0 Putative TPR-like repeat TPR_4 PF07721.14 gi|16081527|ref|NP_393881.1| - 0.055 14.1 0.0 30 5.6 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat HMGL-like PF00682.19 gi|16081527|ref|NP_393881.1| - 0.071 12.7 0.1 0.82 9.2 0.0 2.4 2 0 0 2 2 2 0 HMGL-like SHNi-TPR PF10516.9 gi|16081527|ref|NP_393881.1| - 0.083 12.4 0.0 1.1 8.8 0.0 2.8 2 0 0 2 2 2 0 SHNi-TPR TrmB PF01978.19 gi|16081527|ref|NP_393881.1| - 0.093 12.6 0.2 2.4 8.1 0.0 3.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DUF1476 PF07345.11 gi|16081527|ref|NP_393881.1| - 0.11 12.9 1.5 2 8.8 0.1 3.3 3 0 0 3 3 3 0 ATPase inhibitor subunit zeta HTH_24 PF13412.6 gi|16081527|ref|NP_393881.1| - 0.11 12.1 0.1 0.58 9.8 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|16081527|ref|NP_393881.1| - 0.12 12.7 0.0 1.1 9.6 0.1 2.5 3 0 0 3 3 2 0 Transcriptional regulator AAA_16 PF13191.6 gi|16081527|ref|NP_393881.1| - 0.13 12.7 0.0 1.1 9.6 0.0 2.6 2 1 0 2 2 2 0 AAA ATPase domain TPR_17 PF13431.6 gi|16081527|ref|NP_393881.1| - 0.13 12.7 0.4 1.4e+02 3.2 0.0 4.5 5 0 0 5 5 4 0 Tetratricopeptide repeat HTH_IclR PF09339.10 gi|16081527|ref|NP_393881.1| - 0.17 11.7 0.1 0.51 10.2 0.1 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain Sel1 PF08238.12 gi|16081527|ref|NP_393881.1| - 2.1 9.2 4.5 67 4.4 0.1 3.7 3 0 0 3 3 2 0 Sel1 repeat DHODB_Fe-S_bind PF10418.9 gi|16081528|ref|NP_393882.1| - 3.6e-09 36.3 1.9 6.7e-09 35.4 1.9 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.24 gi|16081528|ref|NP_393882.1| - 0.012 16.0 0.0 0.032 14.6 0.0 1.7 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain DHO_dh PF01180.21 gi|16081529|ref|NP_393883.1| - 1.3e-64 218.2 3.2 1.5e-64 218.0 3.2 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|16081529|ref|NP_393883.1| - 3e-09 36.4 0.2 1.7e-08 33.9 0.2 1.9 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 gi|16081529|ref|NP_393883.1| - 0.00022 20.7 1.0 1.1 8.6 0.1 3.7 4 1 0 4 4 4 2 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 gi|16081529|ref|NP_393883.1| - 0.00087 18.4 0.5 0.0015 17.6 0.5 1.5 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 gi|16081529|ref|NP_393883.1| - 0.0011 18.5 1.1 0.0072 15.8 0.2 2.1 1 1 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|16081529|ref|NP_393883.1| - 0.0068 15.8 0.4 0.013 14.9 0.2 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase PcrB PF01884.17 gi|16081529|ref|NP_393883.1| - 0.014 14.8 2.3 0.038 13.4 1.9 1.9 1 1 1 2 2 2 0 PcrB family HMG-CoA_red PF00368.18 gi|16082519|ref|NP_393884.1| - 6.7e-107 357.7 4.1 8.1e-107 357.4 4.1 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Endonuc_Holl PF10107.9 gi|16081530|ref|NP_393885.1| - 3.7e-57 192.7 2.4 4.4e-57 192.4 2.4 1.0 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF4446 PF14584.6 gi|16081530|ref|NP_393885.1| - 0.00019 21.5 2.3 0.00033 20.7 2.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4446) Ly49 PF08391.10 gi|16081530|ref|NP_393885.1| - 0.00064 20.1 0.8 0.00095 19.5 0.8 1.2 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region Apolipoprotein PF01442.18 gi|16081530|ref|NP_393885.1| - 0.0016 18.4 3.5 0.0023 17.8 3.5 1.2 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain EMC3_TMCO1 PF01956.16 gi|16081530|ref|NP_393885.1| - 0.0033 17.2 0.7 0.0052 16.5 0.7 1.3 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like VRR_NUC PF08774.11 gi|16081530|ref|NP_393885.1| - 0.0034 17.4 0.0 0.0054 16.8 0.0 1.6 1 1 0 1 1 1 1 VRR-NUC domain ATP-synt_B PF00430.18 gi|16081530|ref|NP_393885.1| - 0.0034 17.5 7.0 0.0034 17.5 7.0 1.9 2 0 0 2 2 2 1 ATP synthase B/B' CF(0) SLATT_6 PF18169.1 gi|16081530|ref|NP_393885.1| - 0.0043 16.7 0.0 0.0063 16.1 0.0 1.2 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 6 GvpL_GvpF PF06386.11 gi|16081530|ref|NP_393885.1| - 0.0064 16.5 0.3 0.0073 16.3 0.3 1.2 1 0 0 1 1 1 1 Gas vesicle synthesis protein GvpL/GvpF HemX PF04375.14 gi|16081530|ref|NP_393885.1| - 0.0088 15.4 1.3 0.012 15.0 1.3 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4263 PF14082.6 gi|16081530|ref|NP_393885.1| - 0.0089 16.3 0.6 0.017 15.4 0.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4263) DUF948 PF06103.11 gi|16081530|ref|NP_393885.1| - 0.016 15.5 1.1 0.03 14.6 1.1 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Nucleoside_tran PF01733.18 gi|16081530|ref|NP_393885.1| - 0.033 13.6 0.8 0.049 13.0 0.7 1.3 1 1 0 1 1 1 0 Nucleoside transporter Ecm29 PF13001.7 gi|16081530|ref|NP_393885.1| - 0.036 12.8 0.5 0.048 12.3 0.5 1.1 1 0 0 1 1 1 0 Proteasome stabiliser HAUS6_N PF14661.6 gi|16081530|ref|NP_393885.1| - 0.04 13.5 0.1 0.041 13.5 0.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Exonuc_VII_S PF02609.16 gi|16081530|ref|NP_393885.1| - 0.057 13.5 2.9 0.089 12.9 2.4 1.5 1 1 0 1 1 1 0 Exonuclease VII small subunit PKcGMP_CC PF16808.5 gi|16081530|ref|NP_393885.1| - 0.061 13.2 0.2 0.061 13.2 0.2 2.3 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase YabA PF06156.13 gi|16081530|ref|NP_393885.1| - 0.09 13.4 1.8 0.14 12.8 1.8 1.2 1 0 0 1 1 1 0 Initiation control protein YabA Baculo_11_kDa PF06143.11 gi|16081530|ref|NP_393885.1| - 0.12 11.9 1.7 0.26 10.9 1.7 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family Col_cuticle_N PF01484.17 gi|16081530|ref|NP_393885.1| - 0.14 12.3 0.7 0.28 11.3 0.7 1.5 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain SIT PF15330.6 gi|16081530|ref|NP_393885.1| - 0.16 12.4 1.2 0.37 11.2 1.3 1.7 2 1 0 2 2 1 0 SHP2-interacting transmembrane adaptor protein, SIT SID-1_RNA_chan PF13965.6 gi|16081530|ref|NP_393885.1| - 0.16 10.3 0.2 0.2 10.0 0.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 FUSC PF04632.12 gi|16081530|ref|NP_393885.1| - 0.26 9.8 0.8 0.34 9.4 0.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family SKIP_SNW PF02731.15 gi|16081530|ref|NP_393885.1| - 0.29 10.8 7.2 0.42 10.3 7.2 1.2 1 0 0 1 1 1 0 SKIP/SNW domain FemAB PF02388.16 gi|16081530|ref|NP_393885.1| - 0.4 9.5 3.2 0.55 9.1 3.2 1.1 1 0 0 1 1 1 0 FemAB family DUF3619 PF12279.8 gi|16081530|ref|NP_393885.1| - 0.62 10.4 5.9 0.13 12.5 1.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) APG6_N PF17675.1 gi|16081530|ref|NP_393885.1| - 1.1 9.8 8.7 1.6 9.3 8.7 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region PP2C_C PF07830.13 gi|16081530|ref|NP_393885.1| - 1.1 9.8 4.2 1.5 9.3 2.4 2.1 1 1 1 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain SUV3_C PF12513.8 gi|16081530|ref|NP_393885.1| - 1.9 8.5 4.2 1.3 9.0 1.5 2.2 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal LapA_dom PF06305.11 gi|16081530|ref|NP_393885.1| - 4.3 7.2 8.5 0.18 11.6 0.9 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain MFS_1 PF07690.16 gi|16081533|ref|NP_393888.1| - 7.5e-37 127.1 67.2 7.5e-37 127.1 67.2 3.3 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16081533|ref|NP_393888.1| - 4.7e-06 25.7 36.8 0.00025 20.1 17.8 2.5 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|16081533|ref|NP_393888.1| - 0.0035 15.8 4.2 0.0035 15.8 4.2 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector MarR_2 PF12802.7 gi|16081534|ref|NP_393889.1| - 3.5e-09 36.4 0.0 7.2e-09 35.4 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|16081534|ref|NP_393889.1| - 6.3e-09 35.6 0.1 1.4e-08 34.5 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|16081534|ref|NP_393889.1| - 3e-05 24.4 0.0 5.3e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|16081534|ref|NP_393889.1| - 5.3e-05 23.3 0.0 0.00072 19.7 0.0 2.2 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|16081534|ref|NP_393889.1| - 0.0097 15.9 0.0 0.5 10.4 0.0 2.3 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain DUF3116 PF11313.8 gi|16081534|ref|NP_393889.1| - 0.035 13.9 0.0 0.33 10.9 0.0 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) TrmB PF01978.19 gi|16081534|ref|NP_393889.1| - 0.069 13.1 0.1 0.26 11.2 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|16081534|ref|NP_393889.1| - 0.08 12.9 0.0 0.2 11.7 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family RQC PF09382.10 gi|16081534|ref|NP_393889.1| - 0.14 11.9 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 RQC domain BaxI_1 PF12811.7 gi|16081535|ref|NP_393890.1| - 0.19 11.3 9.0 0.26 10.8 9.0 1.3 1 0 0 1 1 1 0 Bax inhibitor 1 like PhosphMutase PF10143.9 gi|16081536|ref|NP_393891.1| - 1.6e-51 174.5 0.0 2.3e-51 174.0 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|16081536|ref|NP_393891.1| - 9.7e-31 107.0 0.0 1.2e-30 106.7 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|16081536|ref|NP_393891.1| - 0.014 15.0 0.1 5 6.6 0.0 2.2 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase Alk_phosphatase PF00245.20 gi|16081536|ref|NP_393891.1| - 0.45 9.4 1.2 0.41 9.5 0.0 1.5 2 0 0 2 2 2 0 Alkaline phosphatase Pyr_redox_2 PF07992.14 gi|16081537|ref|NP_393892.1| - 1.5e-30 106.5 0.1 2.5e-30 105.8 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 gi|16081537|ref|NP_393892.1| - 3.7e-27 94.3 0.1 5.6e-27 93.8 0.1 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox PF00070.27 gi|16081537|ref|NP_393892.1| - 3.7e-13 49.8 0.2 2.9e-05 24.5 0.0 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|16081537|ref|NP_393892.1| - 1.7e-10 40.9 0.3 5.2e-10 39.4 0.0 1.9 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|16081537|ref|NP_393892.1| - 1.1e-09 38.0 0.1 4.3e-05 22.9 0.1 2.7 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|16081537|ref|NP_393892.1| - 1.6e-08 34.1 0.1 4.2e-07 29.4 0.0 2.3 2 0 0 2 2 2 1 Thi4 family DAO PF01266.24 gi|16081537|ref|NP_393892.1| - 6.2e-08 32.6 0.3 4.3e-07 29.8 0.1 2.3 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|16081537|ref|NP_393892.1| - 5.5e-06 26.0 1.3 8.8e-05 22.0 0.0 2.5 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|16081537|ref|NP_393892.1| - 3e-05 23.4 0.1 5.8e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|16081537|ref|NP_393892.1| - 5.4e-05 22.1 0.1 9e-05 21.3 0.1 1.3 1 0 0 1 1 1 1 HI0933-like protein Fer4_17 PF13534.6 gi|16081537|ref|NP_393892.1| - 0.00018 22.0 2.1 0.00033 21.1 0.3 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain AlaDh_PNT_C PF01262.21 gi|16081537|ref|NP_393892.1| - 0.00019 20.8 0.1 0.52 9.6 0.0 2.4 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 gi|16081537|ref|NP_393892.1| - 0.00045 19.4 0.1 0.0038 16.3 0.2 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_7 PF13241.6 gi|16081537|ref|NP_393892.1| - 0.0005 20.5 0.2 0.2 12.1 0.0 2.7 3 0 0 3 3 2 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|16081537|ref|NP_393892.1| - 0.00074 18.7 0.2 0.0013 17.9 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 gi|16081537|ref|NP_393892.1| - 0.0017 17.5 0.0 0.28 10.3 0.0 2.5 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Amino_oxidase PF01593.24 gi|16081537|ref|NP_393892.1| - 0.002 17.5 0.0 0.0071 15.7 0.0 1.8 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Fer4_16 PF13484.6 gi|16081537|ref|NP_393892.1| - 0.0023 18.8 0.4 0.0023 18.8 0.4 2.3 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|16081537|ref|NP_393892.1| - 0.0029 17.7 5.1 0.0081 16.3 5.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081537|ref|NP_393892.1| - 0.0039 17.3 0.5 0.0039 17.3 0.5 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16081537|ref|NP_393892.1| - 0.005 16.9 2.4 0.005 16.9 2.4 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|16081537|ref|NP_393892.1| - 0.0083 16.3 4.1 0.086 13.0 5.2 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16081537|ref|NP_393892.1| - 0.013 15.5 3.0 0.013 15.5 3.0 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Lycopene_cycl PF05834.12 gi|16081537|ref|NP_393892.1| - 0.022 13.9 0.1 0.038 13.1 0.1 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Fer4 PF00037.27 gi|16081537|ref|NP_393892.1| - 0.023 14.5 2.3 0.023 14.5 2.3 1.8 2 0 0 2 2 1 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16081537|ref|NP_393892.1| - 0.027 15.0 2.6 0.027 15.0 2.6 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain NAD_binding_9 PF13454.6 gi|16081537|ref|NP_393892.1| - 0.03 14.3 0.4 0.084 12.9 0.0 2.0 2 0 0 2 2 1 0 FAD-NAD(P)-binding Fer4_8 PF13183.6 gi|16081537|ref|NP_393892.1| - 0.031 14.7 4.4 0.17 12.4 4.4 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain 3HCDH_N PF02737.18 gi|16081537|ref|NP_393892.1| - 0.033 14.1 1.0 0.29 11.0 0.1 2.4 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|16081537|ref|NP_393892.1| - 0.04 13.3 0.0 1.4 8.2 0.0 2.5 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Fer4_18 PF13746.6 gi|16081537|ref|NP_393892.1| - 0.048 13.8 1.0 0.1 12.8 1.0 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Shikimate_DH PF01488.20 gi|16081537|ref|NP_393892.1| - 0.05 13.7 0.0 11 6.1 0.0 3.0 4 0 0 4 4 3 0 Shikimate / quinate 5-dehydrogenase Trp_halogenase PF04820.14 gi|16081537|ref|NP_393892.1| - 0.074 11.9 0.1 0.15 10.9 0.1 1.4 1 0 0 1 1 1 0 Tryptophan halogenase FMO-like PF00743.19 gi|16081537|ref|NP_393892.1| - 0.096 11.1 0.0 5.3 5.3 0.0 2.2 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like MCRA PF06100.11 gi|16081537|ref|NP_393892.1| - 0.1 11.3 0.0 0.21 10.3 0.0 1.5 2 0 0 2 2 2 0 MCRA family Stb3 PF10330.9 gi|16081537|ref|NP_393892.1| - 0.21 11.7 0.0 0.48 10.5 0.0 1.6 1 0 0 1 1 1 0 Putative Sin3 binding protein Fer4_13 PF13370.6 gi|16081537|ref|NP_393892.1| - 1.1 9.9 4.1 0.73 10.4 0.6 2.4 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|16081537|ref|NP_393892.1| - 3.3 8.4 9.0 0.096 13.2 1.1 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain DUF1634 PF07843.11 gi|16081538|ref|NP_393893.1| - 8.1e-26 90.1 10.5 9.3e-26 89.9 10.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1634) DUF4173 PF13777.6 gi|16081538|ref|NP_393893.1| - 0.16 11.4 0.2 0.16 11.4 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4173) DUF1430 PF07242.11 gi|16081538|ref|NP_393893.1| - 1.4 9.2 13.1 0.24 11.6 7.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1430) DUF4418 PF14387.6 gi|16081538|ref|NP_393893.1| - 1.6 9.0 8.2 11 6.3 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4418) TauE PF01925.19 gi|16082520|ref|NP_393894.1| - 1.7e-40 139.2 33.5 1.7e-40 139.2 33.5 1.6 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE Fijivirus_P9-2 PF06837.11 gi|16082520|ref|NP_393894.1| - 0.13 11.7 7.0 0.14 11.6 4.1 2.0 2 0 0 2 2 2 0 Fijivirus P9-2 protein Fer4_14 PF13394.6 gi|16081539|ref|NP_393895.1| - 0.0034 17.5 0.0 0.0039 17.3 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain He_PIG PF05345.12 gi|16081540|ref|NP_393896.1| - 0.0099 16.1 2.6 0.0099 16.1 2.6 3.9 2 1 1 3 3 3 1 Putative Ig domain CarboxypepD_reg PF13620.6 gi|16081540|ref|NP_393896.1| - 0.043 14.1 2.7 0.096 13.0 0.8 2.3 1 1 1 2 2 2 0 Carboxypeptidase regulatory-like domain DUF1735 PF08522.10 gi|16081540|ref|NP_393896.1| - 0.26 11.9 3.9 3.1 8.4 1.0 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1735) PsbH PF00737.20 gi|16081540|ref|NP_393896.1| - 0.39 10.5 8.9 0.81 9.5 0.6 2.9 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Potass_KdpF PF09604.10 gi|16081540|ref|NP_393896.1| - 1.9 8.5 9.2 1.1 9.3 1.5 3.3 2 0 0 2 2 2 0 F subunit of K+-transporting ATPase (Potass_KdpF) YhhN PF07947.14 gi|16081540|ref|NP_393896.1| - 1.9 8.0 22.7 0.13 11.9 16.7 1.8 2 0 0 2 2 2 0 YhhN family Aldo_ket_red PF00248.21 gi|16081541|ref|NP_393897.1| - 3e-58 197.3 0.1 3.8e-57 193.7 0.1 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family Glyco_hydro_106 PF17132.4 gi|16081541|ref|NP_393897.1| - 0.1 10.8 0.0 0.14 10.4 0.0 1.2 1 0 0 1 1 1 0 alpha-L-rhamnosidase Gpr1_Fun34_YaaH PF01184.19 gi|16081542|ref|NP_393898.1| - 1e-39 136.3 29.1 1.3e-39 135.9 29.1 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family AMP-binding PF00501.28 gi|16081543|ref|NP_393899.1| - 6.3e-92 308.4 0.0 7.5e-92 308.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|16081543|ref|NP_393899.1| - 1.9e-23 82.1 2.2 5.3e-23 80.7 2.2 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|16081543|ref|NP_393899.1| - 7.4e-22 78.1 0.3 1.9e-21 76.8 0.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain FdhD-NarQ PF02634.15 gi|16081545|ref|NP_393901.1| - 6.4e-75 251.9 0.0 7.8e-75 251.6 0.0 1.1 1 0 0 1 1 1 1 FdhD/NarQ family DUF1641 PF07849.11 gi|16081546|ref|NP_393902.1| - 1e-07 31.7 3.0 1.9e-07 30.8 0.2 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1641) Hs1pro-1_C PF07014.12 gi|16081546|ref|NP_393902.1| - 0.054 13.0 0.1 0.06 12.8 0.1 1.1 1 0 0 1 1 1 0 Hs1pro-1 protein C-terminus Molybdopterin PF00384.22 gi|16081547|ref|NP_393903.1| - 9.4e-86 288.4 0.0 1.3e-85 288.0 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|16081547|ref|NP_393903.1| - 2.4e-27 95.2 0.0 4.9e-27 94.2 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|16081547|ref|NP_393903.1| - 3.5e-18 65.3 0.6 3.5e-18 65.3 0.6 2.4 2 0 0 2 2 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_4 PF13510.6 gi|16081547|ref|NP_393903.1| - 2.7e-14 52.9 0.1 6.5e-14 51.8 0.1 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NADH-G_4Fe-4S_3 PF10588.9 gi|16081547|ref|NP_393903.1| - 6.7e-14 51.1 2.0 3e-13 49.1 2.0 2.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer4 PF00037.27 gi|16081547|ref|NP_393903.1| - 4.4e-12 45.3 16.5 2.5e-07 30.2 1.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|16081547|ref|NP_393903.1| - 4.4e-11 42.3 12.0 1.4e-06 28.1 1.7 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|16081547|ref|NP_393903.1| - 2.9e-10 40.1 7.7 2.5e-05 24.3 2.4 3.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081547|ref|NP_393903.1| - 4e-08 33.3 7.8 4e-08 33.3 7.8 2.7 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16081547|ref|NP_393903.1| - 2.2e-07 31.3 9.1 2.2e-07 31.3 9.1 3.5 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|16081547|ref|NP_393903.1| - 1.2e-06 28.8 6.6 1.2e-06 28.8 6.6 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 gi|16081547|ref|NP_393903.1| - 1.4e-06 28.1 0.1 4.9e-06 26.4 0.1 1.9 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.6 gi|16081547|ref|NP_393903.1| - 9.2e-06 25.7 10.2 9.2e-06 25.7 10.2 3.8 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16081547|ref|NP_393903.1| - 0.00027 20.9 23.3 0.0022 18.0 4.0 3.4 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|16081547|ref|NP_393903.1| - 0.00048 20.8 4.0 0.15 12.8 0.5 2.8 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|16081547|ref|NP_393903.1| - 0.0018 19.1 20.3 0.0053 17.7 4.0 4.1 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain zf-C2HE PF16278.5 gi|16081547|ref|NP_393903.1| - 0.012 16.0 0.3 3.1 8.3 0.1 2.6 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Fer4_13 PF13370.6 gi|16081547|ref|NP_393903.1| - 0.023 15.2 11.5 2.2 8.9 1.8 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|16081547|ref|NP_393903.1| - 0.067 13.7 13.6 0.48 11.1 2.3 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|16081547|ref|NP_393903.1| - 0.89 10.1 20.1 0.081 13.5 11.4 3.2 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|16081547|ref|NP_393903.1| - 8.8 7.2 20.3 0.43 11.5 1.2 3.5 3 1 1 4 4 3 0 4Fe-4S dicluster domain Ycf9 PF01737.17 gi|16081548|ref|NP_393904.1| - 0.013 15.4 2.8 0.014 15.3 0.8 2.1 2 0 0 2 2 2 0 YCF9 YtpI PF14007.6 gi|16081548|ref|NP_393904.1| - 7.9 6.7 9.5 0.13 12.5 1.1 2.2 2 1 0 2 2 2 0 YtpI-like protein AA_permease_2 PF13520.6 gi|16081549|ref|NP_393905.1| - 6.1e-39 134.0 52.1 6.1e-39 134.0 52.1 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 gi|16081549|ref|NP_393905.1| - 4.1e-27 94.9 40.7 4.1e-27 94.9 40.7 2.2 2 0 0 2 2 2 1 Amino acid permease Polysacc_synt_C PF14667.6 gi|16081549|ref|NP_393905.1| - 0.00017 21.7 8.4 0.00017 21.7 8.4 5.3 4 1 2 6 6 6 1 Polysaccharide biosynthesis C-terminal domain DUF5310 PF17237.2 gi|16081549|ref|NP_393905.1| - 0.033 14.0 1.6 0.27 11.1 0.5 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5310) Rieske PF00355.26 gi|16081550|ref|NP_393906.1| - 6.5e-14 51.6 0.0 7.1e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|16081550|ref|NP_393906.1| - 1.2e-07 31.6 0.0 1.4e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain BA14K PF07886.11 gi|16081550|ref|NP_393906.1| - 0.057 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 BA14K-like protein ETF PF01012.21 gi|16081551|ref|NP_393907.1| - 1.4e-53 181.5 0.0 1.5e-35 122.8 0.0 2.2 2 0 0 2 2 2 2 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|16081551|ref|NP_393907.1| - 1.2e-26 92.6 0.0 2e-26 91.8 0.0 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain GntR PF00392.21 gi|16081551|ref|NP_393907.1| - 0.18 11.5 0.2 23 4.8 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family RNA_pol_N PF01194.17 gi|16081553|ref|NP_393909.1| - 2.1e-27 95.2 0.4 2.4e-27 95.0 0.4 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Ribosomal_S9 PF00380.19 gi|16081554|ref|NP_393910.1| - 5.1e-31 107.7 2.2 5.7e-31 107.6 2.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|16081555|ref|NP_393911.1| - 8.3e-08 32.5 0.2 1.1e-05 25.7 0.2 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18 PF17135.4 gi|16081556|ref|NP_393912.1| - 1.4e-08 34.4 0.0 1.5e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|16081556|ref|NP_393912.1| - 4.6e-05 24.1 0.2 0.00019 22.1 0.2 1.9 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UbiA PF01040.18 gi|16081557|ref|NP_393913.1| - 2.6e-44 151.4 24.7 4.2e-44 150.7 24.8 1.3 1 1 0 1 1 1 1 UbiA prenyltransferase family NDUF_B4 PF07225.12 gi|16081557|ref|NP_393913.1| - 2.8 7.8 4.9 12 5.8 0.0 2.8 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) polyprenyl_synt PF00348.17 gi|16081558|ref|NP_393914.1| - 3.3e-61 206.6 0.0 4.3e-61 206.2 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase ArsA_ATPase PF02374.15 gi|16081559|ref|NP_393915.1| - 4.4e-85 285.5 0.0 5.3e-85 285.3 0.0 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase ArsA_HSP20 PF17886.1 gi|16081559|ref|NP_393915.1| - 2.5e-19 68.6 0.0 5.6e-19 67.5 0.0 1.7 1 0 0 1 1 1 1 HSP20-like domain found in ArsA AAA_31 PF13614.6 gi|16081559|ref|NP_393915.1| - 5e-10 39.6 0.0 1.2e-09 38.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|16081559|ref|NP_393915.1| - 1.8e-07 31.2 0.0 2.3e-07 30.9 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|16081559|ref|NP_393915.1| - 5.3e-05 22.8 0.3 0.00057 19.4 0.2 2.1 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|16081559|ref|NP_393915.1| - 0.00095 18.7 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ PhoH PF02562.16 gi|16081559|ref|NP_393915.1| - 0.0054 16.2 0.1 0.0087 15.5 0.1 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_24 PF13479.6 gi|16081559|ref|NP_393915.1| - 0.0068 16.2 0.0 0.017 14.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain Fer4_NifH PF00142.18 gi|16081559|ref|NP_393915.1| - 0.0094 15.4 0.1 0.016 14.6 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family HSP20 PF00011.21 gi|16081559|ref|NP_393915.1| - 0.024 14.8 0.0 0.062 13.5 0.0 1.7 1 1 0 1 1 1 0 Hsp20/alpha crystallin family SRP54 PF00448.22 gi|16081559|ref|NP_393915.1| - 0.03 14.0 0.4 0.067 12.8 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|16081559|ref|NP_393915.1| - 0.044 12.8 0.1 0.07 12.1 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Aldedh PF00171.22 gi|16081561|ref|NP_393917.1| - 3.8e-129 431.2 0.0 4.3e-129 431.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ECH_1 PF00378.20 gi|16081562|ref|NP_393918.1| - 2e-42 145.2 0.0 2.3e-42 145.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|16081562|ref|NP_393918.1| - 2.2e-27 96.4 0.0 1.2e-24 87.5 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase adh_short_C2 PF13561.6 gi|16081563|ref|NP_393919.1| - 6.5e-52 176.4 0.3 7.8e-52 176.2 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081563|ref|NP_393919.1| - 5.8e-49 166.2 1.6 7.5e-49 165.9 1.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081563|ref|NP_393919.1| - 2.1e-07 31.0 0.2 2.9e-07 30.6 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|16081563|ref|NP_393919.1| - 0.0019 17.7 0.5 0.0068 15.9 0.5 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family MBA1 PF07961.11 gi|16081563|ref|NP_393919.1| - 0.014 14.4 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 MBA1-like protein ApbA PF02558.16 gi|16081563|ref|NP_393919.1| - 0.062 12.9 0.2 0.097 12.3 0.2 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA THF_DHG_CYH_C PF02882.19 gi|16081563|ref|NP_393919.1| - 0.18 11.1 1.9 0.55 9.5 0.2 2.5 2 2 1 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MFS_1 PF07690.16 gi|16081564|ref|NP_393920.1| - 3.5e-15 55.8 55.5 4e-12 45.7 24.3 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Radical_SAM PF04055.21 gi|16081565|ref|NP_393921.1| - 2.6e-31 109.2 0.2 5.4e-31 108.2 0.2 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|16081565|ref|NP_393921.1| - 1.3e-22 80.1 0.0 2.1e-22 79.4 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|16081565|ref|NP_393921.1| - 5.8e-08 33.1 0.0 1.1e-07 32.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|16081565|ref|NP_393921.1| - 2.2e-07 31.0 0.1 4.9e-07 29.9 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain GTP_EFTU PF00009.27 gi|16081566|ref|NP_393922.1| - 7.3e-56 188.8 0.0 1e-55 188.3 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|16081566|ref|NP_393922.1| - 4.8e-37 126.7 0.3 3.5e-36 123.9 0.0 2.4 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|16081566|ref|NP_393922.1| - 6.9e-19 68.0 0.2 2e-18 66.5 0.1 1.9 2 0 0 2 2 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|16081566|ref|NP_393922.1| - 4.9e-07 29.8 0.0 1.3e-05 25.3 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|16081566|ref|NP_393922.1| - 4.1e-05 23.4 0.2 9.9e-05 22.2 0.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Ras PF00071.22 gi|16081566|ref|NP_393922.1| - 0.00056 19.5 0.1 0.0029 17.2 0.0 1.9 1 1 1 2 2 2 1 Ras family Roc PF08477.13 gi|16081566|ref|NP_393922.1| - 0.0059 16.8 0.0 0.62 10.3 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 gi|16081566|ref|NP_393922.1| - 0.014 14.8 0.0 0.035 13.5 0.0 1.6 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region FeoB_N PF02421.18 gi|16081566|ref|NP_393922.1| - 0.027 14.0 0.0 0.41 10.2 0.0 2.7 2 1 0 2 2 2 0 Ferrous iron transport protein B PduV-EutP PF10662.9 gi|16081566|ref|NP_393922.1| - 0.082 12.6 0.1 2 8.2 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 gi|16081566|ref|NP_393922.1| - 0.088 12.2 0.0 0.69 9.3 0.0 2.1 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Septin PF00735.18 gi|16081566|ref|NP_393922.1| - 0.16 11.2 0.0 0.32 10.2 0.0 1.5 1 1 0 1 1 1 0 Septin Ribosomal_S10 PF00338.22 gi|16081567|ref|NP_393923.1| - 1.5e-30 105.3 0.0 1.7e-30 105.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|16081567|ref|NP_393923.1| - 0.0041 17.9 0.0 0.0083 16.9 0.0 1.4 1 0 0 1 1 1 1 Primosomal protein N C-terminal domain GTP_EFTU PF00009.27 gi|16081568|ref|NP_393924.1| - 1.2e-63 214.2 1.2 1.9e-63 213.6 1.2 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|16081568|ref|NP_393924.1| - 2.2e-25 88.8 0.1 1e-24 86.6 0.0 2.3 1 1 1 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|16081568|ref|NP_393924.1| - 3.1e-24 84.8 0.1 7.3e-24 83.7 0.1 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|16081568|ref|NP_393924.1| - 3.5e-24 84.6 0.0 1.1e-23 83.1 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|16081568|ref|NP_393924.1| - 3.1e-14 53.1 1.7 1.7e-13 50.7 1.7 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|16081568|ref|NP_393924.1| - 9.9e-05 22.4 0.3 0.00027 21.0 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|16081568|ref|NP_393924.1| - 0.0018 18.1 0.0 0.0047 16.8 0.0 1.7 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain RuvC PF02075.17 gi|16081568|ref|NP_393924.1| - 0.029 14.3 1.8 0.084 12.8 0.1 2.4 3 0 0 3 3 3 0 Crossover junction endodeoxyribonuclease RuvC SRPRB PF09439.10 gi|16081568|ref|NP_393924.1| - 0.044 13.2 0.1 0.14 11.6 0.1 1.9 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ras PF00071.22 gi|16081568|ref|NP_393924.1| - 0.069 12.8 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 Ras family DUF2283 PF10049.9 gi|16081568|ref|NP_393924.1| - 0.087 13.1 0.0 0.48 10.7 0.0 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) Peripla_BP_2 PF01497.18 gi|16081569|ref|NP_393925.1| - 4.9e-44 150.7 0.0 5.6e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein DNA_pol_B PF00136.21 gi|16081572|ref|NP_393928.1| - 1.3e-19 70.2 0.0 2.2e-06 26.6 0.0 3.0 2 1 1 3 3 3 3 DNA polymerase family B AAA_22 PF13401.6 gi|16082521|ref|NP_393929.1| - 2.5e-12 47.3 0.0 4.1e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|16082521|ref|NP_393929.1| - 9.7e-12 45.6 0.0 2.3e-08 34.6 0.0 3.0 2 1 1 3 3 3 1 AAA ATPase domain TniB PF05621.11 gi|16082521|ref|NP_393929.1| - 2.9e-06 26.8 0.0 6.3e-06 25.7 0.0 1.5 1 1 0 1 1 1 1 Bacterial TniB protein AAA PF00004.29 gi|16082521|ref|NP_393929.1| - 2.5e-05 24.7 0.0 4.6e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|16082521|ref|NP_393929.1| - 0.0001 22.3 1.3 0.00063 19.7 0.7 2.3 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea PIF1 PF05970.14 gi|16082521|ref|NP_393929.1| - 0.0013 17.9 0.0 0.002 17.4 0.0 1.2 1 0 0 1 1 1 1 PIF1-like helicase RNA_helicase PF00910.22 gi|16082521|ref|NP_393929.1| - 0.0043 17.4 0.0 0.028 14.8 0.0 2.2 2 0 0 2 2 2 1 RNA helicase Rad17 PF03215.15 gi|16082521|ref|NP_393929.1| - 0.0075 16.2 0.0 0.019 14.9 0.0 1.7 1 1 0 1 1 1 1 Rad17 P-loop domain Kinesin PF00225.23 gi|16082521|ref|NP_393929.1| - 0.0086 15.0 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain AAA_30 PF13604.6 gi|16082521|ref|NP_393929.1| - 0.0099 15.6 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|16082521|ref|NP_393929.1| - 0.011 14.9 0.0 0.046 12.9 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF815) AAA_5 PF07728.14 gi|16082521|ref|NP_393929.1| - 0.02 14.9 0.0 0.047 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TFIID-31kDa PF02291.15 gi|16082521|ref|NP_393929.1| - 0.021 14.9 0.4 0.15 12.1 0.1 2.1 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit AAA_7 PF12775.7 gi|16082521|ref|NP_393929.1| - 0.022 14.3 0.0 0.046 13.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|16082521|ref|NP_393929.1| - 0.041 13.9 0.0 0.077 13.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|16082521|ref|NP_393929.1| - 0.056 13.1 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_14 PF13173.6 gi|16082521|ref|NP_393929.1| - 0.058 13.4 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|16082521|ref|NP_393929.1| - 0.066 12.4 0.0 0.099 11.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ATP-synt_ab PF00006.25 gi|16082521|ref|NP_393929.1| - 0.083 12.5 0.0 1.6 8.4 0.0 2.2 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Microtub_bd PF16796.5 gi|16082521|ref|NP_393929.1| - 0.085 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Microtubule binding PadR PF03551.14 gi|16082521|ref|NP_393929.1| - 0.093 12.7 0.1 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family AAA_24 PF13479.6 gi|16082521|ref|NP_393929.1| - 0.1 12.3 0.0 0.2 11.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain Cdc6_C PF09079.11 gi|16082521|ref|NP_393929.1| - 0.12 12.3 0.1 0.27 11.2 0.1 1.7 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain NACHT PF05729.12 gi|16082521|ref|NP_393929.1| - 0.16 11.9 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Sugar_tr PF00083.24 gi|16081573|ref|NP_393930.1| - 4.7e-55 187.3 30.5 5.7e-55 187.0 30.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081573|ref|NP_393930.1| - 4.9e-29 101.3 54.4 3e-20 72.5 19.1 3.0 1 1 2 3 3 3 3 Major Facilitator Superfamily MFS_2 PF13347.6 gi|16081573|ref|NP_393930.1| - 0.74 8.3 44.4 0.0064 15.1 8.3 4.1 2 2 2 4 4 4 0 MFS/sugar transport protein DUF4147 PF13660.6 gi|16082522|ref|NP_393931.1| - 3.2e-51 174.1 0.0 4.9e-51 173.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|16082522|ref|NP_393931.1| - 1e-30 106.2 0.2 1.9e-30 105.3 0.2 1.5 1 0 0 1 1 1 1 MOFRL family Isochorismatase PF00857.20 gi|16081574|ref|NP_393932.1| - 9.9e-43 146.3 0.0 1.1e-42 146.2 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Acetyltransf_1 PF00583.25 gi|16081575|ref|NP_393933.1| - 1e-15 58.0 0.0 1.3e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|16081575|ref|NP_393933.1| - 9.9e-14 51.5 0.0 1.4e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|16081575|ref|NP_393933.1| - 3.1e-13 49.7 0.0 4.5e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16081575|ref|NP_393933.1| - 1.3e-11 44.8 0.1 1.6e-11 44.6 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081575|ref|NP_393933.1| - 8e-07 28.9 0.0 1.3e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|16081575|ref|NP_393933.1| - 2e-05 24.7 0.0 0.00013 22.0 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|16081575|ref|NP_393933.1| - 0.0011 18.7 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 gi|16081575|ref|NP_393933.1| - 0.0096 16.0 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 gi|16081575|ref|NP_393933.1| - 0.011 15.7 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_15 PF17013.5 gi|16081575|ref|NP_393933.1| - 0.038 13.4 0.3 0.065 12.7 0.3 1.7 1 1 0 1 1 1 0 Putative acetyl-transferase Gly_acyl_tr_C PF08444.10 gi|16081575|ref|NP_393933.1| - 0.13 12.5 0.0 0.24 11.7 0.0 1.4 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region Acetyltransf_16 PF05301.11 gi|16081575|ref|NP_393933.1| - 0.14 11.9 0.0 0.18 11.6 0.0 1.5 1 1 0 1 1 1 0 GNAT acetyltransferase, Mec-17 malic PF00390.19 gi|16082523|ref|NP_393934.1| - 2e-23 83.1 0.1 4.6e-16 59.1 0.1 3.3 2 1 1 3 3 3 2 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|16082523|ref|NP_393934.1| - 1.3e-19 70.6 0.6 8.3e-19 67.9 0.6 2.0 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain Acetyltransf_10 PF13673.7 gi|16081576|ref|NP_393935.1| - 5.7e-14 52.1 0.0 1.3e-13 51.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|16081576|ref|NP_393935.1| - 6.9e-14 52.1 0.0 2.8e-13 50.1 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|16081576|ref|NP_393935.1| - 1.9e-11 44.2 0.0 4.3e-11 43.1 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081576|ref|NP_393935.1| - 1.3e-10 41.1 0.0 3.3e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|16081576|ref|NP_393935.1| - 0.00018 22.2 0.0 0.00078 20.1 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|16081576|ref|NP_393935.1| - 0.00039 20.5 0.0 0.00093 19.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|16081576|ref|NP_393935.1| - 0.00061 19.9 0.0 0.0012 19.0 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|16081576|ref|NP_393935.1| - 0.0026 17.9 0.0 0.018 15.2 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|16081576|ref|NP_393935.1| - 0.0027 17.6 0.0 0.0055 16.7 0.0 1.5 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase Acetyltransf_6 PF13480.7 gi|16081576|ref|NP_393935.1| - 0.043 14.0 0.0 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|16081576|ref|NP_393935.1| - 0.078 12.4 0.0 0.23 10.9 0.0 1.7 1 1 0 1 1 1 0 Putative acetyl-transferase TPR_2 PF07719.17 gi|16081577|ref|NP_393936.1| - 8e-06 25.6 4.6 0.14 12.4 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|16081577|ref|NP_393936.1| - 1.4e-05 25.2 1.2 0.0026 18.0 0.1 3.2 3 1 2 5 5 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|16081577|ref|NP_393936.1| - 0.0014 18.5 1.5 6.2 7.1 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16081577|ref|NP_393936.1| - 0.0025 18.5 0.9 4.4 8.4 0.0 4.4 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|16081577|ref|NP_393936.1| - 0.0031 17.3 2.1 5 7.1 0.2 3.8 5 0 0 5 5 4 1 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|16081577|ref|NP_393936.1| - 0.0039 17.2 3.1 0.097 12.7 0.5 3.2 1 1 2 3 3 3 1 Anaphase-promoting complex subunit 5 TPR_9 PF13371.6 gi|16081577|ref|NP_393936.1| - 0.0045 17.1 0.2 0.09 12.9 0.0 3.0 3 1 0 3 3 3 1 Tetratricopeptide repeat YfdX PF10938.8 gi|16081577|ref|NP_393936.1| - 0.0063 16.5 4.1 0.011 15.7 2.6 2.2 2 1 0 2 2 2 1 YfdX protein TPR_21 PF09976.9 gi|16081577|ref|NP_393936.1| - 0.012 15.3 3.6 0.012 15.3 3.6 2.3 2 1 2 4 4 4 0 Tetratricopeptide repeat-like domain TPR_MalT PF17874.1 gi|16081577|ref|NP_393936.1| - 0.013 14.9 0.5 0.038 13.4 0.5 1.7 1 1 0 1 1 1 0 MalT-like TPR region CheX PF13690.6 gi|16081577|ref|NP_393936.1| - 0.025 14.7 2.9 0.06 13.5 0.3 2.7 2 1 1 3 3 3 0 Chemotaxis phosphatase CheX Pantoate_ligase PF02569.15 gi|16081577|ref|NP_393936.1| - 0.027 13.7 0.1 0.052 12.8 0.1 1.5 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase Ribophorin_II PF05817.14 gi|16081577|ref|NP_393936.1| - 0.049 12.2 3.1 0.066 11.8 3.1 1.3 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II TPR_8 PF13181.6 gi|16081577|ref|NP_393936.1| - 0.061 13.6 10.7 21 5.6 0.0 5.4 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 gi|16081577|ref|NP_393936.1| - 0.066 13.9 3.6 45 5.0 0.0 4.3 5 0 0 5 5 4 0 Tetratricopeptide repeat Hormone_3 PF00159.18 gi|16081577|ref|NP_393936.1| - 0.097 12.8 0.1 0.65 10.1 0.1 2.2 2 0 0 2 2 2 0 Pancreatic hormone peptide L27_1 PF09058.10 gi|16081577|ref|NP_393936.1| - 0.24 11.4 6.0 22 5.1 0.1 4.4 4 1 0 4 4 4 0 L27_1 FlbT PF07378.11 gi|16081577|ref|NP_393936.1| - 0.3 11.2 4.0 0.49 10.5 0.5 2.6 1 1 3 4 4 4 0 Flagellar protein FlbT DUF2408 PF10303.9 gi|16081577|ref|NP_393936.1| - 0.44 11.1 3.5 0.96 10.0 3.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) zf-C4H2 PF10146.9 gi|16081577|ref|NP_393936.1| - 1.4 9.2 4.8 2.4 8.4 4.8 1.5 1 0 0 1 1 1 0 Zinc finger-containing protein TPR_1 PF00515.28 gi|16081577|ref|NP_393936.1| - 2.5 8.1 8.4 19 5.3 0.0 4.2 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 gi|16081577|ref|NP_393936.1| - 8.3 6.8 8.6 2.1 8.7 0.4 3.6 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF2240 PF09999.9 gi|16081578|ref|NP_393937.1| - 1e-43 148.5 0.5 1.1e-43 148.3 0.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) DUF4777 PF16007.5 gi|16081578|ref|NP_393937.1| - 0.00054 20.2 0.0 0.077 13.3 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4777) SelB-wing_2 PF09106.11 gi|16081578|ref|NP_393937.1| - 0.041 14.1 0.0 8.8 6.6 0.0 2.5 2 1 0 2 2 2 0 Elongation factor SelB, winged helix DUF1707 PF08044.11 gi|16081578|ref|NP_393937.1| - 0.058 13.5 0.0 0.22 11.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1707) Endonuclease_5 PF04493.14 gi|16081579|ref|NP_393938.1| - 1.5e-36 125.9 0.0 2.2e-36 125.4 0.0 1.2 1 0 0 1 1 1 1 Endonuclease V DNA_binding_1 PF01035.20 gi|16081579|ref|NP_393938.1| - 1.2e-19 70.3 0.0 2.5e-19 69.2 0.0 1.5 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain UvrC_HhH_N PF08459.11 gi|16081579|ref|NP_393938.1| - 0.087 12.7 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal MM_CoA_mutase PF01642.22 gi|16081581|ref|NP_393940.1| - 1.5e-227 756.2 0.0 1.7e-227 756.0 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase B12-binding PF02310.19 gi|16081582|ref|NP_393941.1| - 1.7e-21 76.5 0.2 2e-21 76.2 0.2 1.1 1 0 0 1 1 1 1 B12 binding domain Ocnus PF05005.15 gi|16081582|ref|NP_393941.1| - 0.034 14.3 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) LpxI_N PF17930.1 gi|16081582|ref|NP_393941.1| - 0.086 12.7 0.1 0.28 11.1 0.1 1.8 1 1 0 1 1 1 0 LpxI N-terminal domain MeaB PF03308.16 gi|16081583|ref|NP_393942.1| - 4.1e-77 258.8 1.6 5.1e-77 258.5 1.6 1.0 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|16081583|ref|NP_393942.1| - 4.4e-05 24.0 0.1 9.6e-05 22.9 0.1 1.6 1 0 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|16081583|ref|NP_393942.1| - 4.5e-05 23.4 0.1 0.0068 16.2 0.1 2.7 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|16081583|ref|NP_393942.1| - 9.5e-05 22.2 0.2 0.00016 21.4 0.2 1.3 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|16081583|ref|NP_393942.1| - 0.00012 21.7 0.6 0.00051 19.7 0.6 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 gi|16081583|ref|NP_393942.1| - 0.00022 21.2 0.6 0.0004 20.3 0.6 1.6 1 1 0 1 1 1 1 NTPase SRP54 PF00448.22 gi|16081583|ref|NP_393942.1| - 0.00066 19.4 0.3 0.0028 17.3 0.2 2.0 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain ABC_tran PF00005.27 gi|16081583|ref|NP_393942.1| - 0.002 18.6 0.2 0.0045 17.5 0.2 1.6 1 0 0 1 1 1 1 ABC transporter KAP_NTPase PF07693.14 gi|16081583|ref|NP_393942.1| - 0.0027 17.0 0.0 0.0052 16.1 0.0 1.6 1 1 0 1 1 1 1 KAP family P-loop domain AAA_16 PF13191.6 gi|16081583|ref|NP_393942.1| - 0.0042 17.5 0.1 0.0077 16.6 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain ParA PF10609.9 gi|16081583|ref|NP_393942.1| - 0.0044 16.5 1.1 0.005 16.3 0.1 1.5 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase MMR_HSR1 PF01926.23 gi|16081583|ref|NP_393942.1| - 0.0052 16.9 0.1 0.01 15.9 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase Rad17 PF03215.15 gi|16081583|ref|NP_393942.1| - 0.0053 16.7 0.1 0.0091 15.9 0.1 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain CbiA PF01656.23 gi|16081583|ref|NP_393942.1| - 0.0054 16.8 0.0 0.012 15.6 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 gi|16081583|ref|NP_393942.1| - 0.0076 16.5 0.1 0.014 15.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|16081583|ref|NP_393942.1| - 0.015 15.2 0.0 0.028 14.3 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase RsgA_GTPase PF03193.16 gi|16081583|ref|NP_393942.1| - 0.017 15.1 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase Fer4_NifH PF00142.18 gi|16081583|ref|NP_393942.1| - 0.018 14.5 0.1 0.034 13.6 0.1 1.4 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF87 PF01935.17 gi|16081583|ref|NP_393942.1| - 0.024 14.7 0.5 0.058 13.5 0.2 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain KTI12 PF08433.10 gi|16081583|ref|NP_393942.1| - 0.025 14.0 0.0 0.046 13.2 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 RNA_helicase PF00910.22 gi|16081583|ref|NP_393942.1| - 0.027 14.9 0.0 0.051 14.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA PF00004.29 gi|16081583|ref|NP_393942.1| - 0.033 14.6 0.1 0.06 13.8 0.1 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GTP_EFTU PF00009.27 gi|16081583|ref|NP_393942.1| - 0.033 13.7 0.3 0.29 10.6 0.3 2.1 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain ArsA_ATPase PF02374.15 gi|16081583|ref|NP_393942.1| - 0.034 13.3 0.5 0.063 12.5 0.5 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_31 PF13614.6 gi|16081583|ref|NP_393942.1| - 0.04 13.8 1.4 0.11 12.4 0.1 2.0 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|16081583|ref|NP_393942.1| - 0.043 13.8 0.0 0.077 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 gi|16081583|ref|NP_393942.1| - 0.051 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein MipZ PF09140.11 gi|16081583|ref|NP_393942.1| - 0.064 12.5 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 ATPase MipZ AAA_29 PF13555.6 gi|16081583|ref|NP_393942.1| - 0.075 12.8 0.2 0.16 11.7 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RuvB_N PF05496.12 gi|16081583|ref|NP_393942.1| - 0.079 12.7 0.3 0.21 11.3 0.1 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Helicase_RecD PF05127.14 gi|16081583|ref|NP_393942.1| - 0.16 11.8 0.1 0.26 11.1 0.1 1.3 1 0 0 1 1 1 0 Helicase AAA_19 PF13245.6 gi|16081583|ref|NP_393942.1| - 0.17 12.2 0.3 0.35 11.2 0.3 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|16081583|ref|NP_393942.1| - 0.19 10.9 0.1 0.33 10.1 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_11 PF13086.6 gi|16081583|ref|NP_393942.1| - 0.2 11.4 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|16081583|ref|NP_393942.1| - 0.2 11.0 0.1 0.32 10.3 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DJ-1_PfpI PF01965.24 gi|16081584|ref|NP_393943.1| - 5.7e-48 162.8 0.0 7.1e-48 162.5 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|16081584|ref|NP_393943.1| - 0.0014 18.3 0.0 0.25 11.0 0.0 2.2 1 1 1 2 2 2 2 ThiJ/PfpI family-like MazE_antitoxin PF04014.18 gi|16081585|ref|NP_393944.1| - 2.2e-07 30.7 0.2 2.2e-07 30.7 0.2 1.8 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin Sulf_transp PF04143.14 gi|16081586|ref|NP_393945.1| - 6.8e-36 124.4 30.6 3.9e-21 75.9 17.6 2.7 2 1 1 3 3 3 2 Sulphur transport tRNA-synt_2b PF00587.25 gi|16081587|ref|NP_393946.1| - 5e-40 137.4 0.0 9e-40 136.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|16081587|ref|NP_393946.1| - 4.5e-27 94.4 6.7 8e-27 93.6 5.1 2.2 3 0 0 3 3 3 1 Seryl-tRNA synthetase N-terminal domain TMF_TATA_bd PF12325.8 gi|16081587|ref|NP_393946.1| - 0.00038 20.7 1.8 0.00084 19.5 1.8 1.5 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DUF1690 PF07956.11 gi|16081587|ref|NP_393946.1| - 0.027 14.9 0.7 0.054 13.9 0.7 1.4 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF2408 PF10303.9 gi|16081587|ref|NP_393946.1| - 0.028 15.0 0.3 0.082 13.5 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) FapA PF03961.13 gi|16081587|ref|NP_393946.1| - 0.05 12.2 0.2 0.071 11.7 0.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A PRKG1_interact PF15898.5 gi|16081587|ref|NP_393946.1| - 0.06 14.3 3.2 0.14 13.1 3.2 1.6 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain DUF4349 PF14257.6 gi|16081587|ref|NP_393946.1| - 0.14 11.5 0.4 0.28 10.6 0.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) APG6_N PF17675.1 gi|16081587|ref|NP_393946.1| - 0.22 12.0 1.3 0.54 10.8 1.3 1.6 1 0 0 1 1 1 0 Apg6 coiled-coil region GreA_GreB_N PF03449.15 gi|16081587|ref|NP_393946.1| - 0.64 10.2 4.7 4.7 7.4 4.2 2.6 2 1 0 2 2 2 0 Transcription elongation factor, N-terminal AdoHcyase PF05221.17 gi|16081588|ref|NP_393947.1| - 2.8e-56 190.9 0.0 2.4e-29 102.4 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|16081588|ref|NP_393947.1| - 5.6e-50 169.6 4.6 1.1e-49 168.6 4.6 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 gi|16081588|ref|NP_393947.1| - 2e-08 34.0 0.5 4.5e-08 32.9 0.5 1.6 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 gi|16081588|ref|NP_393947.1| - 1.3e-07 31.2 0.2 2.3e-07 30.4 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|16081588|ref|NP_393947.1| - 0.002 18.4 1.4 0.014 15.6 1.4 2.4 1 1 0 1 1 1 1 TrkA-N domain THF_DHG_CYH_C PF02882.19 gi|16081588|ref|NP_393947.1| - 0.0022 17.3 1.2 0.0092 15.3 1.2 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_7 PF13241.6 gi|16081588|ref|NP_393947.1| - 0.0029 18.0 0.5 0.0066 16.9 0.5 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|16081588|ref|NP_393947.1| - 0.007 16.3 0.6 0.22 11.4 0.6 2.5 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|16081588|ref|NP_393947.1| - 0.052 13.6 0.7 0.13 12.3 0.7 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF364 PF04016.12 gi|16081588|ref|NP_393947.1| - 0.066 12.8 0.0 0.19 11.3 0.0 1.8 2 0 0 2 2 2 0 Putative heavy-metal chelation MMPL PF03176.15 gi|16081589|ref|NP_393948.1| - 1.4e-60 205.0 16.0 2.4e-33 115.5 2.4 2.4 2 0 0 2 2 2 2 MMPL family Wzz PF02706.15 gi|16081589|ref|NP_393948.1| - 0.038 14.3 4.6 5.3 7.4 0.1 4.4 2 1 1 3 3 3 0 Chain length determinant protein HSP20 PF00011.21 gi|16081590|ref|NP_393949.1| - 4.3e-07 30.0 0.4 5.7e-06 26.4 0.4 2.1 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|16081590|ref|NP_393949.1| - 1.3e-06 27.8 0.0 2.7e-06 26.8 0.0 1.5 1 1 0 1 1 1 1 HSP20-like domain found in ArsA PIH1_CS PF18201.1 gi|16081590|ref|NP_393949.1| - 1.8e-05 25.0 0.1 2.7e-05 24.5 0.1 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain CS PF04969.16 gi|16081590|ref|NP_393949.1| - 0.0011 19.9 0.7 0.0017 19.3 0.7 1.2 1 0 0 1 1 1 1 CS domain HTH_20 PF12840.7 gi|16081591|ref|NP_393950.1| - 2.3e-08 33.9 0.2 1.1e-07 31.8 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|16081591|ref|NP_393950.1| - 1.1e-06 28.4 2.8 3.6e-05 23.5 1.4 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|16081591|ref|NP_393950.1| - 0.00023 20.6 5.1 0.015 14.8 1.8 2.9 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding IF2_N PF04760.15 gi|16081591|ref|NP_393950.1| - 0.0022 17.8 1.7 0.19 11.5 0.0 2.6 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region DUF4254 PF14063.6 gi|16081591|ref|NP_393950.1| - 0.0038 17.0 2.1 0.0066 16.3 2.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4254) Sigma70_r4_2 PF08281.12 gi|16081591|ref|NP_393950.1| - 0.01 15.5 3.5 0.01 15.5 0.1 2.5 3 1 0 3 3 3 1 Sigma-70, region 4 DUF2250 PF10007.9 gi|16081591|ref|NP_393950.1| - 0.01 15.9 0.8 0.12 12.5 0.1 2.6 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) Sigma70_ECF PF07638.11 gi|16081591|ref|NP_393950.1| - 0.01 15.7 1.4 0.035 14.0 0.3 1.9 2 0 0 2 2 2 0 ECF sigma factor HTH_Tnp_ISL3 PF13542.6 gi|16081591|ref|NP_393950.1| - 0.019 14.4 0.0 0.04 13.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 NYD-SP28 PF14772.6 gi|16081591|ref|NP_393950.1| - 0.024 14.7 0.9 0.024 14.7 0.9 1.7 2 0 0 2 2 2 0 Sperm tail TrmB PF01978.19 gi|16081591|ref|NP_393950.1| - 0.032 14.1 0.5 1 9.3 0.1 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF3791 PF12668.7 gi|16081591|ref|NP_393950.1| - 0.057 13.5 0.0 0.23 11.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) CT_C_D PF02682.16 gi|16081591|ref|NP_393950.1| - 0.14 11.9 0.0 0.31 10.7 0.0 1.5 1 0 0 1 1 1 0 Carboxyltransferase domain, subdomain C and D Rrf2 PF02082.20 gi|16081591|ref|NP_393950.1| - 0.15 12.5 0.7 1.1 9.6 0.2 2.3 2 0 0 2 2 2 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|16081591|ref|NP_393950.1| - 0.21 11.6 4.2 19 5.3 0.2 3.3 2 1 1 3 3 3 0 Crp-like helix-turn-helix domain HTH_1 PF00126.27 gi|16081591|ref|NP_393950.1| - 0.26 11.3 1.4 19 5.3 0.2 3.2 4 0 0 4 4 4 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_9 PF08221.11 gi|16081591|ref|NP_393950.1| - 0.55 10.4 2.2 4.8 7.3 0.4 2.4 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Osmo_CC PF08946.10 gi|16081591|ref|NP_393950.1| - 0.72 10.1 4.5 0.6 10.4 1.1 2.5 2 0 0 2 2 2 0 Osmosensory transporter coiled coil HTH_AsnC-type PF13404.6 gi|16081591|ref|NP_393950.1| - 1.7 8.6 10.8 2.6 7.9 0.8 3.1 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain MSL1_dimer PF16801.5 gi|16081591|ref|NP_393950.1| - 2.6 7.9 0.0 2.6 7.9 0.0 2.7 3 0 0 3 3 3 0 Dimerisation domain of Male-specific-Lethal 1 AhpC-TSA PF00578.21 gi|16081592|ref|NP_393951.1| - 8.4e-28 96.8 0.0 1.4e-27 96.1 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|16081592|ref|NP_393951.1| - 3.4e-10 39.8 0.0 4.9e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|16081592|ref|NP_393951.1| - 4e-08 33.0 0.0 7.5e-08 32.1 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Abhydrolase_1 PF00561.20 gi|16081592|ref|NP_393951.1| - 0.022 14.4 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Y1_Tnp PF01797.16 gi|16081593|ref|NP_393952.1| - 2e-40 137.7 0.3 2.4e-40 137.4 0.3 1.1 1 0 0 1 1 1 1 Transposase IS200 like DUF3910 PF13049.6 gi|16081593|ref|NP_393952.1| - 0.0052 17.1 0.3 0.0082 16.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3910) OrfB_Zn_ribbon PF07282.11 gi|16081594|ref|NP_393953.1| - 1.1e-25 89.3 0.1 3.1e-25 87.9 0.1 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|16081594|ref|NP_393953.1| - 0.0048 17.1 1.0 0.0048 17.1 1.0 1.7 2 0 0 2 2 2 1 Probable transposase HypA PF01155.19 gi|16081594|ref|NP_393953.1| - 0.0055 16.7 2.1 0.11 12.5 0.6 2.6 2 1 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_17 PF17120.5 gi|16081594|ref|NP_393953.1| - 0.013 15.1 0.2 0.023 14.3 0.2 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RNase_E_G PF10150.9 gi|16081594|ref|NP_393953.1| - 0.014 14.9 0.2 0.014 14.9 0.2 1.8 2 0 0 2 2 2 0 Ribonuclease E/G family TackOD1 PF18551.1 gi|16081594|ref|NP_393953.1| - 0.029 14.0 3.7 0.063 12.9 0.9 2.4 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 C1_2 PF03107.16 gi|16081594|ref|NP_393953.1| - 0.056 13.8 0.5 0.12 12.7 0.5 1.5 1 0 0 1 1 1 0 C1 domain UPF0547 PF10571.9 gi|16081594|ref|NP_393953.1| - 0.17 12.0 5.1 4.3 7.5 0.9 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-Mss51 PF13824.6 gi|16081594|ref|NP_393953.1| - 0.61 10.2 3.0 9.7 6.4 3.0 2.6 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ribbon_3 PF13248.6 gi|16081594|ref|NP_393953.1| - 0.96 9.0 4.4 3.2 7.3 0.6 2.2 1 1 1 2 2 2 0 zinc-ribbon domain Anti-TRAP PF15777.5 gi|16081594|ref|NP_393953.1| - 2.3 8.2 4.2 3.9 7.5 0.5 2.3 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zinc_ribbon_2 PF13240.6 gi|16081594|ref|NP_393953.1| - 4.3 7.2 5.6 48 3.9 5.7 2.3 1 1 1 2 2 2 0 zinc-ribbon domain 3HCDH_N PF02737.18 gi|16081595|ref|NP_393954.1| - 3.5e-66 222.5 1.8 4.5e-66 222.2 1.8 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|16081595|ref|NP_393954.1| - 1.2e-23 83.5 0.1 7.1e-22 77.8 0.0 2.8 2 1 1 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|16081595|ref|NP_393954.1| - 1.6e-05 24.9 0.3 0.00041 20.4 0.2 2.7 1 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|16081595|ref|NP_393954.1| - 0.00011 22.4 1.2 0.00031 20.9 1.2 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|16081595|ref|NP_393954.1| - 0.00019 20.8 0.2 0.00029 20.2 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16081595|ref|NP_393954.1| - 0.0012 19.3 0.1 0.0031 18.0 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 gi|16081595|ref|NP_393954.1| - 0.0017 18.9 0.7 0.0073 16.9 0.5 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 gi|16081595|ref|NP_393954.1| - 0.011 16.0 0.1 0.056 13.7 0.1 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain UDPG_MGDP_dh_N PF03721.14 gi|16081595|ref|NP_393954.1| - 0.014 14.9 1.1 0.031 13.9 0.7 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|16081595|ref|NP_393954.1| - 0.021 14.4 0.7 0.076 12.7 0.7 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|16081595|ref|NP_393954.1| - 0.021 15.1 0.1 0.046 14.0 0.1 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain adh_short_C2 PF13561.6 gi|16081595|ref|NP_393954.1| - 0.031 13.8 0.1 0.061 12.9 0.1 1.5 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase TrkA_N PF02254.18 gi|16081595|ref|NP_393954.1| - 0.042 14.1 2.8 0.05 13.9 0.6 2.5 3 1 0 3 3 2 0 TrkA-N domain GatB_Yqey PF02637.18 gi|16081595|ref|NP_393954.1| - 0.075 12.9 0.1 0.54 10.1 0.0 2.2 2 0 0 2 2 2 0 GatB domain adh_short PF00106.25 gi|16081595|ref|NP_393954.1| - 0.076 12.5 0.2 0.25 10.8 0.0 1.7 1 1 0 2 2 2 0 short chain dehydrogenase DAO PF01266.24 gi|16081595|ref|NP_393954.1| - 0.14 11.7 0.6 0.21 11.1 0.6 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase UDG PF03167.19 gi|16081596|ref|NP_393955.1| - 4.6e-33 114.4 0.0 5.5e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Nramp PF01566.18 gi|16082524|ref|NP_393956.1| - 2.4e-41 141.9 17.2 2.4e-41 141.9 17.2 2.1 2 0 0 2 2 2 2 Natural resistance-associated macrophage protein SIS PF01380.22 gi|16081597|ref|NP_393957.1| - 1e-23 83.6 1.0 2.2e-11 43.7 0.3 2.3 2 0 0 2 2 2 2 SIS domain bact-PGI_C PF10432.9 gi|16081597|ref|NP_393957.1| - 0.00014 21.9 0.3 0.00062 19.8 0.0 2.1 3 0 0 3 3 3 1 Bacterial phospho-glucose isomerase C-terminal SIS domain OCD_Mu_crystall PF02423.15 gi|16081598|ref|NP_393958.1| - 3.6e-38 131.3 0.1 6.3e-38 130.5 0.1 1.3 1 1 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|16081598|ref|NP_393958.1| - 5.2e-07 29.8 0.0 1.2e-06 28.7 0.0 1.5 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|16081598|ref|NP_393958.1| - 0.00024 21.6 0.0 0.0006 20.4 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short_C2 PF13561.6 gi|16081599|ref|NP_393959.1| - 7.7e-34 117.3 0.1 1.3e-33 116.6 0.1 1.4 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081599|ref|NP_393959.1| - 1.6e-33 115.8 0.1 2.9e-33 115.0 0.1 1.4 1 0 0 1 1 1 1 short chain dehydrogenase Aldolase_II PF00596.21 gi|16081599|ref|NP_393959.1| - 1.7e-25 90.0 0.0 1.1e-22 80.9 0.0 2.3 2 0 0 2 2 2 2 Class II Aldolase and Adducin N-terminal domain KR PF08659.10 gi|16081599|ref|NP_393959.1| - 2.1e-05 24.5 0.0 5.4e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 KR domain Methyltransf_25 PF13649.6 gi|16081599|ref|NP_393959.1| - 0.0096 16.6 0.1 0.23 12.2 0.0 2.9 3 0 0 3 3 3 1 Methyltransferase domain Epimerase PF01370.21 gi|16081599|ref|NP_393959.1| - 0.067 12.6 0.0 9.7 5.6 0.0 2.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Cyclophil_like2 PF18050.1 gi|16081600|ref|NP_393960.1| - 0.084 12.8 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Cyclophilin-like family Peptidase_M24 PF00557.24 gi|16081601|ref|NP_393961.1| - 1.7e-22 80.2 0.0 2e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|16081601|ref|NP_393961.1| - 2.6e-06 28.1 0.0 1.5e-05 25.7 0.0 2.1 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain THP2 PF09432.10 gi|16081601|ref|NP_393961.1| - 0.19 11.8 1.8 2.8 8.0 0.0 2.8 2 1 1 3 3 3 0 Tho complex subunit THP2 Glyco_trans_2_3 PF13632.6 gi|16081602|ref|NP_393962.1| - 2.2e-24 86.5 6.1 2.2e-24 86.5 6.1 2.7 3 1 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|16081602|ref|NP_393962.1| - 1.2e-16 61.4 0.0 1.6e-16 60.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|16081602|ref|NP_393962.1| - 6.6e-15 55.0 0.0 1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 gi|16081602|ref|NP_393962.1| - 1e-12 48.2 0.2 2.6e-12 46.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 PrgI PF12666.7 gi|16081602|ref|NP_393962.1| - 0.018 15.7 4.4 0.018 15.7 4.4 3.4 3 0 0 3 3 3 0 PrgI family protein Glyco_transf_92 PF01697.27 gi|16081602|ref|NP_393962.1| - 0.023 14.3 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 92 AA_kinase PF00696.28 gi|16081604|ref|NP_393964.1| - 6.8e-25 88.1 0.4 2.1e-23 83.2 0.4 2.0 1 1 0 1 1 1 1 Amino acid kinase family RNA_pol_Rpb2_4 PF04566.13 gi|16081604|ref|NP_393964.1| - 0.084 13.2 0.1 0.23 11.8 0.0 1.8 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 4 MoCF_biosynth PF00994.24 gi|16081605|ref|NP_393965.1| - 3.5e-32 111.1 0.2 7.2e-32 110.0 0.0 1.5 2 0 0 2 2 2 1 Probable molybdopterin binding domain Collar PF07484.12 gi|16081605|ref|NP_393965.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Phage Tail Collar Domain Phage_SSB PF16773.5 gi|16081605|ref|NP_393965.1| - 0.11 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein Pkinase PF00069.25 gi|16081606|ref|NP_393966.1| - 2.5e-05 23.8 0.0 4e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.22 gi|16081606|ref|NP_393966.1| - 4.9e-05 23.0 0.0 0.00011 21.9 0.0 1.5 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|16081606|ref|NP_393966.1| - 0.0084 16.1 0.1 0.088 12.7 0.2 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|16081606|ref|NP_393966.1| - 0.016 14.5 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase Choline_kinase PF01633.20 gi|16081606|ref|NP_393966.1| - 0.14 11.7 0.3 1 8.9 0.1 2.0 2 0 0 2 2 2 0 Choline/ethanolamine kinase DUF2325 PF10087.9 gi|16081607|ref|NP_393967.1| - 0.19 11.9 0.0 0.34 11.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) VWA PF00092.28 gi|16081608|ref|NP_393968.1| - 0.00014 22.2 0.0 0.47 10.7 0.0 2.3 2 0 0 2 2 2 2 von Willebrand factor type A domain VWA_2 PF13519.6 gi|16081608|ref|NP_393968.1| - 0.00065 20.3 0.0 0.13 12.9 0.0 2.3 2 0 0 2 2 2 2 von Willebrand factor type A domain B12-binding PF02310.19 gi|16081609|ref|NP_393969.1| - 9e-21 74.2 0.3 2.8e-20 72.6 0.1 2.0 2 0 0 2 2 2 1 B12 binding domain Radical_SAM PF04055.21 gi|16081609|ref|NP_393969.1| - 9.3e-17 61.9 0.0 3e-16 60.3 0.0 1.9 2 1 0 2 2 2 1 Radical SAM superfamily MCD_N PF17408.2 gi|16081609|ref|NP_393969.1| - 0.037 14.2 0.0 0.11 12.6 0.0 1.8 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain YqgF PF14639.6 gi|16081609|ref|NP_393969.1| - 0.1 12.4 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Holliday-junction resolvase-like of SPT6 MoaC PF01967.21 gi|16081610|ref|NP_393970.1| - 1.7e-43 148.0 0.6 1.9e-43 147.8 0.6 1.0 1 0 0 1 1 1 1 MoaC family MoCF_biosynth PF00994.24 gi|16081611|ref|NP_393971.1| - 2.9e-22 78.9 0.0 3.3e-22 78.7 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain PALP PF00291.25 gi|16081612|ref|NP_393972.1| - 4.9e-48 164.0 0.0 5.7e-48 163.8 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Zn-ribbon_8 PF09723.10 gi|16081612|ref|NP_393972.1| - 0.14 12.3 0.2 0.32 11.1 0.2 1.6 1 0 0 1 1 1 0 Zinc ribbon domain Pilin_N PF07790.11 gi|16081613|ref|NP_393973.1| - 2e-10 41.5 0.1 3.5e-10 40.7 0.1 1.4 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal EMC3_TMCO1 PF01956.16 gi|16081613|ref|NP_393973.1| - 0.094 12.4 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Wzz PF02706.15 gi|16081613|ref|NP_393973.1| - 0.4 11.0 3.7 0.44 10.9 2.8 1.6 1 1 0 1 1 1 0 Chain length determinant protein zf_Rg PF17915.1 gi|16081614|ref|NP_393974.1| - 0.023 14.1 0.2 0.044 13.2 0.2 1.4 1 0 0 1 1 1 0 Reverse gyrase zinc finger OrfB_Zn_ribbon PF07282.11 gi|16081614|ref|NP_393974.1| - 0.033 14.1 0.2 0.064 13.2 0.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF1056 PF06341.11 gi|16081614|ref|NP_393974.1| - 0.093 13.0 0.8 0.093 13.0 0.8 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF1056) zf-ribbon_3 PF13248.6 gi|16081614|ref|NP_393974.1| - 1.2 8.7 3.1 18 4.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain tRNA-synt_2c PF01411.19 gi|16081615|ref|NP_393975.1| - 5.6e-05 21.9 0.3 8.5e-05 21.3 0.3 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) Cytochrom_D1 PF02239.16 gi|16081615|ref|NP_393975.1| - 0.01 14.4 0.1 0.082 11.4 0.0 2.0 2 0 0 2 2 2 0 Cytochrome D1 heme domain RuBisCO_small PF00101.20 gi|16081615|ref|NP_393975.1| - 0.022 14.8 0.1 2 8.5 0.0 2.5 2 1 0 2 2 2 0 Ribulose bisphosphate carboxylase, small chain TPP_enzyme_N PF02776.18 gi|16081616|ref|NP_393976.1| - 8.2e-37 126.5 0.0 1.3e-36 125.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|16081616|ref|NP_393976.1| - 4.3e-18 65.6 0.2 1.2e-17 64.2 0.1 1.7 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|16081616|ref|NP_393976.1| - 1.2e-13 51.0 0.0 3.4e-13 49.5 0.0 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain LDcluster4 PF18306.1 gi|16081617|ref|NP_393977.1| - 2.8e-40 137.5 0.1 3.2e-40 137.3 0.1 1.0 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|16081617|ref|NP_393977.1| - 1.5e-05 24.4 0.2 0.014 14.6 0.3 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.14 gi|16081617|ref|NP_393977.1| - 0.0019 18.3 0.2 0.0035 17.4 0.0 1.5 2 0 0 2 2 2 1 Possible lysine decarboxylase PsiE PF06146.12 gi|16081618|ref|NP_393978.1| - 0.011 16.0 3.6 0.011 16.0 3.6 1.7 2 1 0 2 2 2 0 Phosphate-starvation-inducible E ThiI PF02568.14 gi|16082525|ref|NP_393982.1| - 3.5e-51 173.6 0.0 1.4e-50 171.6 0.0 1.8 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|16082525|ref|NP_393982.1| - 1.6e-17 63.9 0.0 3.5e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 THUMP domain Rhodanese PF00581.20 gi|16082525|ref|NP_393982.1| - 1.5e-07 31.9 0.1 7.2e-07 29.7 0.1 2.1 1 1 0 1 1 1 1 Rhodanese-like domain QueC PF06508.13 gi|16082525|ref|NP_393982.1| - 0.0083 15.7 0.0 2.3 7.6 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|16082525|ref|NP_393982.1| - 0.14 11.9 0.0 1.3 8.8 0.0 2.2 1 1 0 1 1 1 0 PP-loop family Chlor_dismutase PF06778.12 gi|16081621|ref|NP_393983.1| - 4.3e-39 134.1 0.2 5.3e-39 133.8 0.2 1.0 1 0 0 1 1 1 1 Chlorite dismutase Tubulin PF00091.25 gi|16082526|ref|NP_393984.1| - 7.8e-41 140.4 0.0 1.5e-40 139.5 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|16082526|ref|NP_393984.1| - 7.2e-27 93.5 1.0 2.3e-26 91.9 1.0 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain DUF1508 PF07411.12 gi|16082526|ref|NP_393984.1| - 0.083 12.8 0.1 0.17 11.7 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) Sec23_BS PF08033.12 gi|16081622|ref|NP_393985.1| - 0.077 13.7 1.0 0.16 12.7 1.0 1.8 1 1 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain CBM_4_9 PF02018.17 gi|16081623|ref|NP_393986.1| - 0.042 14.1 0.2 0.095 13.0 0.2 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain MFS_1 PF07690.16 gi|16081624|ref|NP_393987.1| - 1.5e-28 99.7 47.5 1.5e-28 99.7 47.5 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16081624|ref|NP_393987.1| - 7.9e-06 25.0 12.8 7.9e-06 25.0 12.8 2.9 2 2 1 3 3 3 1 Sugar (and other) transporter DUF1129 PF06570.11 gi|16081624|ref|NP_393987.1| - 8.8 5.8 13.3 0.34 10.4 3.8 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) tRNA-synt_1b PF00579.25 gi|16081625|ref|NP_393988.1| - 2.3e-42 145.3 0.1 2.9e-42 145.0 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Lip_prot_lig_C PF10437.9 gi|16082527|ref|NP_393989.1| - 6.7e-14 51.6 0.1 7.4e-14 51.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus Nbas_N PF15492.6 gi|16082527|ref|NP_393989.1| - 0.056 12.8 0.0 0.061 12.7 0.0 1.1 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal YbaB_DNA_bd PF02575.16 gi|16082527|ref|NP_393989.1| - 0.22 11.8 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family BPL_LplA_LipB PF03099.19 gi|16081626|ref|NP_393990.1| - 4.1e-09 36.4 0.0 6.1e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family SRP54 PF00448.22 gi|16081627|ref|NP_393991.1| - 1.8e-67 226.8 0.5 2.8e-67 226.2 0.5 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|16081627|ref|NP_393991.1| - 1.2e-23 83.6 1.2 5.4e-23 81.5 0.9 2.3 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|16081627|ref|NP_393991.1| - 7.4e-14 51.7 0.3 7.4e-14 51.7 0.3 3.9 6 0 0 6 6 6 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|16081627|ref|NP_393991.1| - 0.00011 22.2 0.0 0.00073 19.6 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 gi|16081627|ref|NP_393991.1| - 0.0055 17.0 0.1 0.02 15.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain 6PF2K PF01591.18 gi|16081627|ref|NP_393991.1| - 0.01 15.2 0.0 0.024 13.9 0.0 1.6 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_5 PF07728.14 gi|16081627|ref|NP_393991.1| - 0.015 15.3 0.0 0.042 13.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|16081627|ref|NP_393991.1| - 0.024 15.0 0.0 0.064 13.6 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain APS_kinase PF01583.20 gi|16081627|ref|NP_393991.1| - 0.042 13.7 0.1 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase Phage_TAC_5 PF08890.11 gi|16081627|ref|NP_393991.1| - 0.054 13.5 1.2 0.47 10.4 0.1 2.9 3 0 0 3 3 3 0 Phage XkdN-like tail assembly chaperone protein, TAC MobB PF03205.14 gi|16081627|ref|NP_393991.1| - 0.056 13.3 0.2 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ParA PF10609.9 gi|16081627|ref|NP_393991.1| - 0.072 12.5 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA PF00004.29 gi|16081627|ref|NP_393991.1| - 0.56 10.6 3.5 5.6 7.4 0.1 3.6 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) FAD_binding_3 PF01494.19 gi|16082528|ref|NP_393992.1| - 2e-15 56.9 1.0 9.8e-14 51.4 1.0 2.6 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|16082528|ref|NP_393992.1| - 5.2e-12 45.8 1.7 1.1e-11 44.8 0.9 1.8 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|16082528|ref|NP_393992.1| - 1.1e-11 44.5 0.3 4.1e-06 26.1 0.0 2.4 2 0 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.14 gi|16082528|ref|NP_393992.1| - 4.6e-11 42.2 0.1 5e-07 28.9 0.0 2.1 1 1 0 2 2 2 2 Tryptophan halogenase DAO PF01266.24 gi|16082528|ref|NP_393992.1| - 1.4e-08 34.7 1.4 0.00027 20.7 0.2 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|16082528|ref|NP_393992.1| - 2.7e-08 33.4 0.4 9.2e-08 31.7 0.3 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|16082528|ref|NP_393992.1| - 1.1e-06 28.8 0.4 3e-06 27.3 0.1 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|16082528|ref|NP_393992.1| - 2.2e-06 27.1 0.3 3.6e-05 23.1 0.1 2.4 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|16082528|ref|NP_393992.1| - 5.4e-05 22.4 0.3 5.4e-05 22.4 0.3 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|16082528|ref|NP_393992.1| - 0.00013 20.8 5.5 0.00019 20.3 0.1 2.9 2 1 1 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|16082528|ref|NP_393992.1| - 0.00083 18.5 0.1 0.045 12.8 0.1 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox PF00070.27 gi|16082528|ref|NP_393992.1| - 0.0061 17.1 0.1 0.037 14.6 0.1 2.4 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Ist1 PF03398.14 gi|16082528|ref|NP_393992.1| - 0.019 14.9 1.0 0.08 12.9 1.0 1.9 1 1 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway AlaDh_PNT_C PF01262.21 gi|16082528|ref|NP_393992.1| - 0.028 13.7 0.3 0.14 11.4 0.0 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|16082528|ref|NP_393992.1| - 0.037 13.3 0.1 0.12 11.6 0.1 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Hydantoinase_A PF01968.18 gi|16082528|ref|NP_393992.1| - 0.053 12.8 0.8 0.11 11.7 0.0 1.9 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase SE PF08491.10 gi|16082528|ref|NP_393992.1| - 0.057 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Squalene epoxidase NAD_binding_7 PF13241.6 gi|16082528|ref|NP_393992.1| - 0.059 13.8 1.4 4.8 7.7 0.0 3.5 3 1 0 3 3 3 0 Putative NAD(P)-binding ThiF PF00899.21 gi|16082528|ref|NP_393992.1| - 0.16 11.3 0.0 7.9 5.8 0.0 2.2 2 0 0 2 2 2 0 ThiF family Fer4 PF00037.27 gi|16081628|ref|NP_393993.1| - 4.5e-17 61.1 15.4 1.2e-08 34.4 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16081628|ref|NP_393993.1| - 3e-13 50.1 34.5 4e-07 30.5 13.5 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16081628|ref|NP_393993.1| - 2.4e-10 40.1 14.6 2.6e-06 27.3 3.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|16081628|ref|NP_393993.1| - 7.3e-10 38.9 21.0 3.7e-07 30.2 11.5 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|16081628|ref|NP_393993.1| - 4.8e-09 37.0 9.1 0.00015 22.6 0.7 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|16081628|ref|NP_393993.1| - 1.3e-08 34.4 11.7 9.3e-05 22.3 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|16081628|ref|NP_393993.1| - 4.8e-08 33.0 11.1 8.4e-05 22.6 2.5 1.9 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081628|ref|NP_393993.1| - 5.1e-08 32.9 21.5 9e-06 25.7 12.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|16081628|ref|NP_393993.1| - 3.8e-07 30.5 6.0 0.0022 18.4 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16081628|ref|NP_393993.1| - 8.6e-05 22.8 13.7 0.0041 17.5 3.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|16081628|ref|NP_393993.1| - 0.00038 20.9 11.0 0.093 13.3 1.6 2.1 1 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|16081628|ref|NP_393993.1| - 0.0018 18.3 2.1 0.002 18.2 2.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16081628|ref|NP_393993.1| - 0.002 18.9 18.6 0.17 12.9 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|16081628|ref|NP_393993.1| - 0.0063 16.7 10.5 0.14 12.4 2.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|16081628|ref|NP_393993.1| - 0.023 15.2 14.7 0.17 12.5 2.4 2.9 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|16081628|ref|NP_393993.1| - 0.048 14.4 13.7 0.15 12.8 2.9 3.0 2 2 1 3 3 3 0 4Fe-4S single cluster domain ETF_QO PF05187.13 gi|16081628|ref|NP_393993.1| - 0.24 11.5 3.1 0.32 11.1 3.1 1.3 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 gi|16081628|ref|NP_393993.1| - 0.42 11.5 13.7 3.3 8.6 3.8 2.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain MTHFR_C PF12225.8 gi|16081628|ref|NP_393993.1| - 0.47 10.1 9.4 2 8.1 2.5 2.1 1 1 1 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal Myosin_tail_1 PF01576.19 gi|16081629|ref|NP_393994.1| - 7.6e-06 24.1 12.5 8.8e-06 23.8 12.5 1.0 1 0 0 1 1 1 1 Myosin tail Spc7 PF08317.11 gi|16081629|ref|NP_393994.1| - 0.00017 20.6 10.0 0.00026 20.0 10.0 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein TMF_TATA_bd PF12325.8 gi|16081629|ref|NP_393994.1| - 0.00018 21.7 12.0 0.019 15.2 1.1 2.4 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding GAS PF13851.6 gi|16081629|ref|NP_393994.1| - 0.00022 20.6 14.7 0.00044 19.7 7.9 2.2 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding HAUS6_N PF14661.6 gi|16081629|ref|NP_393994.1| - 0.00039 20.1 0.9 0.00039 20.1 0.9 1.5 1 1 0 1 1 1 1 HAUS augmin-like complex subunit 6 N-terminus DUF4200 PF13863.6 gi|16081629|ref|NP_393994.1| - 0.0013 19.2 17.9 0.0031 17.9 6.7 2.4 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) CENP-F_leu_zip PF10473.9 gi|16081629|ref|NP_393994.1| - 0.0025 17.8 8.5 0.0025 17.8 8.5 2.5 2 1 1 3 3 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ADIP PF11559.8 gi|16081629|ref|NP_393994.1| - 0.0027 17.8 10.9 0.0048 17.0 10.9 1.5 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 gi|16081629|ref|NP_393994.1| - 0.0028 17.0 14.9 0.0094 15.3 8.6 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) Fib_alpha PF08702.10 gi|16081629|ref|NP_393994.1| - 0.0037 17.4 7.8 0.0037 17.4 7.8 2.1 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family YkyA PF10368.9 gi|16081629|ref|NP_393994.1| - 0.0044 16.7 15.5 0.0089 15.7 15.5 1.5 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein SKA2 PF16740.5 gi|16081629|ref|NP_393994.1| - 0.0059 16.4 2.6 0.0059 16.4 2.6 2.8 1 1 1 2 2 2 1 Spindle and kinetochore-associated protein 2 DUF4164 PF13747.6 gi|16081629|ref|NP_393994.1| - 0.013 15.8 13.2 0.017 15.4 3.2 3.1 2 1 1 3 3 2 0 Domain of unknown function (DUF4164) Prominin PF05478.11 gi|16081629|ref|NP_393994.1| - 0.017 13.1 5.3 0.023 12.7 5.3 1.1 1 0 0 1 1 1 0 Prominin COG5 PF10392.9 gi|16081629|ref|NP_393994.1| - 0.017 15.3 4.3 0.58 10.3 2.2 2.3 1 1 1 2 2 2 0 Golgi transport complex subunit 5 BRE1 PF08647.11 gi|16081629|ref|NP_393994.1| - 0.018 15.1 17.6 0.29 11.2 9.1 2.4 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase DUF1664 PF07889.12 gi|16081629|ref|NP_393994.1| - 0.02 14.9 12.3 0.18 11.9 3.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 gi|16081629|ref|NP_393994.1| - 0.038 14.1 18.3 0.36 10.9 18.0 2.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus IFT57 PF10498.9 gi|16081629|ref|NP_393994.1| - 0.056 12.4 12.6 0.16 10.9 12.4 1.6 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 KASH_CCD PF14662.6 gi|16081629|ref|NP_393994.1| - 0.058 13.2 14.8 0.033 14.0 10.1 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH RasGAP_C PF03836.15 gi|16081629|ref|NP_393994.1| - 0.075 13.2 11.6 2.1 8.5 5.9 2.5 1 1 1 2 2 2 0 RasGAP C-terminus ATG16 PF08614.11 gi|16081629|ref|NP_393994.1| - 0.081 13.1 10.5 0.46 10.7 9.9 2.1 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) FUSC PF04632.12 gi|16081629|ref|NP_393994.1| - 0.085 11.4 0.2 0.15 10.5 0.1 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family Baculo_PEP_C PF04513.12 gi|16081629|ref|NP_393994.1| - 0.09 12.8 6.4 0.2 11.7 5.0 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 gi|16081629|ref|NP_393994.1| - 0.096 13.2 16.4 0.48 11.0 9.0 2.6 1 1 1 2 2 2 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 gi|16081629|ref|NP_393994.1| - 0.11 12.7 15.7 0.15 12.3 4.7 2.6 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain TPR_MLP1_2 PF07926.12 gi|16081629|ref|NP_393994.1| - 0.12 12.5 11.1 0.17 11.9 7.7 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein SHE3 PF17078.5 gi|16081629|ref|NP_393994.1| - 0.12 12.1 14.0 0.19 11.4 14.0 1.3 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Atg14 PF10186.9 gi|16081629|ref|NP_393994.1| - 0.14 11.3 7.9 0.19 10.7 7.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2046 PF09755.9 gi|16081629|ref|NP_393994.1| - 0.14 11.4 14.6 0.052 12.8 12.2 1.4 2 0 0 2 2 1 0 Uncharacterized conserved protein H4 (DUF2046) YscO PF07321.12 gi|16081629|ref|NP_393994.1| - 0.14 12.1 7.7 0.27 11.2 7.3 1.7 1 1 1 2 2 2 0 Type III secretion protein YscO AAA_13 PF13166.6 gi|16081629|ref|NP_393994.1| - 0.15 10.7 12.7 0.014 14.1 4.2 2.0 1 1 1 2 2 2 0 AAA domain Taxilin PF09728.9 gi|16081629|ref|NP_393994.1| - 0.2 10.8 16.3 0.54 9.4 16.3 1.6 1 1 0 1 1 1 0 Myosin-like coiled-coil protein MYO10_CC PF16735.5 gi|16081629|ref|NP_393994.1| - 0.22 11.6 6.4 1.6 8.9 0.1 3.2 2 1 0 2 2 2 0 Unconventional myosin-X coiled coil domain Laminin_II PF06009.12 gi|16081629|ref|NP_393994.1| - 0.22 11.5 10.5 0.36 10.9 0.6 2.2 1 1 1 2 2 2 0 Laminin Domain II Jnk-SapK_ap_N PF09744.9 gi|16081629|ref|NP_393994.1| - 0.23 11.7 9.4 1.5 9.0 9.4 2.1 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF2630 PF10944.8 gi|16081629|ref|NP_393994.1| - 0.26 11.8 9.1 1.5 9.3 0.3 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF2630) Syntaxin-6_N PF09177.11 gi|16081629|ref|NP_393994.1| - 0.29 11.7 4.9 1.8 9.2 3.8 2.6 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF4515 PF14988.6 gi|16081629|ref|NP_393994.1| - 0.29 10.9 16.6 2.8 7.7 2.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4515) COG2 PF06148.11 gi|16081629|ref|NP_393994.1| - 0.32 11.1 6.5 5.3 7.1 6.6 2.7 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 FmiP_Thoc5 PF09766.9 gi|16081629|ref|NP_393994.1| - 0.34 10.1 11.6 0.09 12.0 4.4 2.1 1 1 1 2 2 2 0 Fms-interacting protein/Thoc5 FadA PF09403.10 gi|16081629|ref|NP_393994.1| - 0.41 11.2 18.9 0.45 11.0 7.8 3.3 1 1 1 2 2 2 0 Adhesion protein FadA DivIVA PF05103.13 gi|16081629|ref|NP_393994.1| - 0.47 10.5 12.6 1.1 9.3 12.5 1.8 1 1 0 1 1 1 0 DivIVA protein KxDL PF10241.9 gi|16081629|ref|NP_393994.1| - 0.48 10.7 9.6 3.3 8.1 2.6 2.8 1 1 2 3 3 3 0 Uncharacterized conserved protein Phage_Mu_Gam PF07352.12 gi|16081629|ref|NP_393994.1| - 0.49 10.3 11.0 0.038 13.9 3.3 2.5 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein DUF883 PF05957.13 gi|16081629|ref|NP_393994.1| - 0.51 11.0 5.8 0.8 10.4 3.6 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) ZapB PF06005.12 gi|16081629|ref|NP_393994.1| - 0.57 10.7 10.1 7.7 7.0 6.4 2.4 1 1 1 2 2 2 0 Cell division protein ZapB bZIP_1 PF00170.21 gi|16081629|ref|NP_393994.1| - 0.58 10.3 8.8 1.2 9.3 0.1 3.1 3 0 0 3 3 3 0 bZIP transcription factor Fez1 PF06818.15 gi|16081629|ref|NP_393994.1| - 0.59 10.6 10.5 2 8.9 9.0 2.0 1 1 1 2 2 2 0 Fez1 FapA PF03961.13 gi|16081629|ref|NP_393994.1| - 0.62 8.6 13.8 5.5 5.5 13.8 2.0 1 1 0 1 1 1 0 Flagellar Assembly Protein A Plasmid_RAQPRD PF09686.10 gi|16081629|ref|NP_393994.1| - 0.68 10.2 5.6 0.26 11.5 1.1 2.3 1 1 1 2 2 2 0 Plasmid protein of unknown function (Plasmid_RAQPRD) DUF2968 PF11180.8 gi|16081629|ref|NP_393994.1| - 0.7 9.5 9.3 0.46 10.1 6.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) THOC7 PF05615.13 gi|16081629|ref|NP_393994.1| - 0.81 10.0 20.2 6.1 7.1 5.4 3.2 1 1 0 2 2 2 0 Tho complex subunit 7 DUF3713 PF12506.8 gi|16081629|ref|NP_393994.1| - 0.84 10.0 6.2 8 6.8 6.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3713) DUF724 PF05266.14 gi|16081629|ref|NP_393994.1| - 0.88 9.4 12.6 0.097 12.5 2.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) JIP_LZII PF16471.5 gi|16081629|ref|NP_393994.1| - 0.88 9.8 9.5 1.6 9.0 3.2 2.8 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II Cauli_AT PF03233.13 gi|16081629|ref|NP_393994.1| - 1 9.3 10.2 0.31 11.0 2.1 2.4 1 1 1 2 2 2 0 Aphid transmission protein DUF5082 PF16888.5 gi|16081629|ref|NP_393994.1| - 1.1 9.6 14.3 5.3 7.3 1.1 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Mod_r PF07200.13 gi|16081629|ref|NP_393994.1| - 1.1 9.3 12.2 2.3 8.3 6.6 2.4 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Prefoldin_2 PF01920.20 gi|16081629|ref|NP_393994.1| - 1.3 9.1 16.6 3.8 7.5 3.4 3.4 1 1 2 3 3 3 0 Prefoldin subunit DUF4407 PF14362.6 gi|16081629|ref|NP_393994.1| - 1.5 8.1 10.7 3.2 7.0 10.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SRP_SPB PF02978.19 gi|16081629|ref|NP_393994.1| - 1.7 9.3 9.4 5.9 7.6 4.3 3.3 1 1 1 2 2 2 0 Signal peptide binding domain Cortex-I_coil PF09304.10 gi|16081629|ref|NP_393994.1| - 2.1 8.6 15.8 0.46 10.7 7.0 2.9 2 1 1 3 3 3 0 Cortexillin I, coiled coil WXG100 PF06013.12 gi|16081629|ref|NP_393994.1| - 2.8 8.2 8.4 14 6.0 6.6 2.9 1 1 1 2 2 2 0 Proteins of 100 residues with WXG TMPIT PF07851.13 gi|16081629|ref|NP_393994.1| - 3 7.0 9.3 5.8 6.1 9.0 1.6 1 1 0 1 1 1 0 TMPIT-like protein LMBR1 PF04791.16 gi|16081629|ref|NP_393994.1| - 3.4 6.5 5.8 4.1 6.2 5.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein YabA PF06156.13 gi|16081629|ref|NP_393994.1| - 5 7.8 12.8 47 4.7 0.3 3.2 1 1 1 2 2 2 0 Initiation control protein YabA TolA_bind_tri PF16331.5 gi|16081629|ref|NP_393994.1| - 5.4 7.2 15.9 3.5 7.8 4.2 3.8 1 1 2 3 3 3 0 TolA binding protein trimerisation HIP1_clath_bdg PF16515.5 gi|16081629|ref|NP_393994.1| - 5.6 7.6 12.9 24 5.6 5.7 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF948 PF06103.11 gi|16081629|ref|NP_393994.1| - 6.3 7.1 7.8 3.2e+02 1.7 7.8 2.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) SlyX PF04102.12 gi|16081629|ref|NP_393994.1| - 7.4 7.3 14.6 24 5.7 0.1 3.6 2 1 2 4 4 3 0 SlyX GIT_CC PF16559.5 gi|16081629|ref|NP_393994.1| - 7.7 6.5 11.0 29 4.6 3.3 3.4 1 1 3 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor Nas2_N PF18265.1 gi|16081629|ref|NP_393994.1| - 9.7 6.2 11.5 8.1 6.4 6.7 2.9 2 1 0 2 2 1 0 Nas2 N_terminal domain DUF1759 PF03564.15 gi|16081629|ref|NP_393994.1| - 9.8 6.1 9.3 19 5.1 1.5 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1759) tRNA-synt_2 PF00152.20 gi|16081630|ref|NP_393995.1| - 1.2e-91 307.1 0.1 1.4e-91 306.8 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|16081630|ref|NP_393995.1| - 2.3e-14 53.2 0.1 5e-14 52.0 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|16081630|ref|NP_393995.1| - 0.0007 19.2 0.6 0.023 14.2 0.0 2.5 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) DUF92 PF01940.16 gi|16081631|ref|NP_393996.1| - 1.3e-47 162.2 10.2 2.3e-47 161.4 10.2 1.4 1 1 0 1 1 1 1 Integral membrane protein DUF92 DUF4234 PF14018.6 gi|16081631|ref|NP_393996.1| - 2.3 8.4 6.2 23 5.2 1.7 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4234) SOR_SNZ PF01680.17 gi|16081632|ref|NP_393997.1| - 2.1e-93 311.8 7.1 4.9e-90 300.8 7.2 2.3 2 0 0 2 2 2 2 SOR/SNZ family ThiG PF05690.14 gi|16081632|ref|NP_393997.1| - 1.5e-10 40.8 7.8 9.3e-08 31.7 0.1 2.5 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|16081632|ref|NP_393997.1| - 5.7e-05 22.4 0.6 0.13 11.3 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) OMPdecase PF00215.24 gi|16081632|ref|NP_393997.1| - 0.00039 20.1 0.1 0.00099 18.8 0.1 1.7 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NMO PF03060.15 gi|16081632|ref|NP_393997.1| - 0.0023 17.4 6.9 0.015 14.7 0.1 2.4 2 0 0 2 2 2 1 Nitronate monooxygenase IGPS PF00218.21 gi|16081632|ref|NP_393997.1| - 0.026 13.7 0.0 0.7 9.0 0.0 2.2 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|16081632|ref|NP_393997.1| - 0.039 13.1 3.1 0.24 10.6 0.0 3.0 2 1 1 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase DUF4021 PF13213.6 gi|16081632|ref|NP_393997.1| - 0.057 13.4 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4021) Lyase_1 PF00206.20 gi|16081633|ref|NP_393998.1| - 5.6e-47 160.6 0.0 7.4e-47 160.2 0.0 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|16081633|ref|NP_393998.1| - 9.7e-15 54.9 0.1 1.5e-13 51.1 0.0 2.7 3 0 0 3 3 3 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|16081633|ref|NP_393998.1| - 3.2e-07 30.4 0.1 1.1e-06 28.7 0.1 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal COX3 PF00510.18 gi|16081633|ref|NP_393998.1| - 0.0044 16.9 0.0 0.0073 16.2 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III ASL_C2 PF14698.6 gi|16081633|ref|NP_393998.1| - 0.055 14.2 0.0 1.6 9.5 0.0 2.6 2 0 0 2 2 2 0 Argininosuccinate lyase C-terminal FumaraseC_C PF10415.9 gi|16081633|ref|NP_393998.1| - 0.11 12.9 0.0 0.41 11.1 0.0 2.0 1 0 0 1 1 1 0 Fumarase C C-terminus DUF2680 PF10925.8 gi|16081634|ref|NP_393999.1| - 0.1 12.6 0.0 1.4 9.0 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) Diphthami_syn_2 PF01902.17 gi|16081635|ref|NP_394000.1| - 3.3e-40 137.9 0.1 3.9e-40 137.7 0.1 1.1 1 0 0 1 1 1 1 Diphthamide synthase ThiI PF02568.14 gi|16081635|ref|NP_394000.1| - 0.00045 19.9 0.0 0.00089 18.9 0.0 1.5 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|16081635|ref|NP_394000.1| - 0.02 13.7 0.0 0.029 13.2 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase QueC PF06508.13 gi|16081635|ref|NP_394000.1| - 0.028 13.9 0.0 0.039 13.4 0.0 1.4 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC AIRS PF00586.24 gi|16081636|ref|NP_394001.1| - 9.7e-11 42.2 0.0 1.8e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|16081636|ref|NP_394001.1| - 1.5e-05 25.2 0.0 5.6e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain DHHA1 PF02272.19 gi|16081637|ref|NP_394002.1| - 6.5e-20 72.0 0.1 1.3e-19 71.0 0.1 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|16081637|ref|NP_394002.1| - 0.0018 18.5 0.1 0.0034 17.6 0.1 1.5 1 0 0 1 1 1 1 DHH family Radical_SAM PF04055.21 gi|16081638|ref|NP_394003.1| - 1.7e-09 38.2 0.0 6.9e-09 36.3 0.0 2.0 1 1 1 2 2 2 1 Radical SAM superfamily Aminotran_1_2 PF00155.21 gi|16082529|ref|NP_394004.1| - 2.1e-68 231.1 0.0 2.6e-68 230.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|16082529|ref|NP_394004.1| - 7.6e-08 32.1 0.0 1.1e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|16082529|ref|NP_394004.1| - 6.3e-06 25.7 0.0 1.1e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|16082529|ref|NP_394004.1| - 8.5e-06 24.9 0.0 0.00036 19.6 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|16082529|ref|NP_394004.1| - 0.00021 19.9 0.0 0.00027 19.6 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme GHMP_kinases_N PF00288.26 gi|16081639|ref|NP_394005.1| - 6e-13 48.8 4.0 7.9e-13 48.4 1.8 2.3 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|16081639|ref|NP_394005.1| - 4.8e-06 26.8 0.0 4.8e-06 26.8 0.0 2.1 3 0 0 3 3 3 1 GHMP kinases C terminal Cys_Met_Meta_PP PF01053.20 gi|16081640|ref|NP_394006.1| - 9.7e-107 356.8 0.0 1.2e-106 356.5 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|16081640|ref|NP_394006.1| - 7e-06 25.4 0.0 1.4e-05 24.4 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.11 gi|16081640|ref|NP_394006.1| - 2.3e-05 23.1 0.1 7.9e-05 21.3 0.1 1.7 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.19 gi|16081640|ref|NP_394006.1| - 0.0006 18.9 0.0 0.0012 17.8 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V GDC-P PF02347.16 gi|16081640|ref|NP_394006.1| - 0.2 10.4 0.0 0.41 9.4 0.0 1.4 2 0 0 2 2 2 0 Glycine cleavage system P-protein DUF3420 PF11900.8 gi|16081641|ref|NP_394007.1| - 0.014 15.5 0.1 0.031 14.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) DUF302 PF03625.14 gi|16081642|ref|NP_394008.1| - 6.2e-11 42.0 0.0 1.4e-10 40.9 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function DUF302 Methyltransf_31 PF13847.6 gi|16081642|ref|NP_394008.1| - 0.032 14.0 0.0 0.035 13.9 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain eRF1_2 PF03464.15 gi|16081643|ref|NP_394009.1| - 1.9e-45 154.4 0.1 3.4e-45 153.6 0.1 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|16081643|ref|NP_394009.1| - 9.6e-32 109.8 0.0 3.4e-31 108.1 0.0 2.0 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|16081643|ref|NP_394009.1| - 1.8e-16 60.3 0.0 3.4e-16 59.4 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|16081643|ref|NP_394009.1| - 3.8e-15 56.3 0.0 1.3e-14 54.6 0.0 1.8 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|16081643|ref|NP_394009.1| - 5.3e-14 52.7 0.0 8.8e-14 51.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 PhnA_Zn_Ribbon PF08274.12 gi|16081643|ref|NP_394009.1| - 0.27 11.2 1.5 1.4 8.9 0.3 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.10 gi|16081643|ref|NP_394009.1| - 0.33 11.1 2.1 0.82 9.8 0.4 2.4 2 0 0 2 2 2 0 Zinc ribbon domain PALP PF00291.25 gi|16081644|ref|NP_394010.1| - 3.3e-53 181.0 0.0 4.3e-53 180.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme GlutR_N PF05201.15 gi|16081645|ref|NP_394011.1| - 1.9e-31 108.8 0.0 4.4e-31 107.6 0.0 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|16081645|ref|NP_394011.1| - 8e-27 94.0 0.2 1.7e-26 92.9 0.2 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|16081645|ref|NP_394011.1| - 5.6e-10 39.5 0.2 1.7e-09 38.0 0.2 1.9 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain TPR_18 PF13512.6 gi|16081645|ref|NP_394011.1| - 0.0012 19.0 0.8 0.0021 18.2 0.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Sacchrp_dh_NADP PF03435.18 gi|16081645|ref|NP_394011.1| - 0.012 15.9 0.0 0.022 15.0 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|16081645|ref|NP_394011.1| - 0.056 13.3 0.0 0.28 11.1 0.0 2.0 2 0 0 2 2 2 0 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|16081645|ref|NP_394011.1| - 0.071 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Cucumopine_C PF18631.1 gi|16081645|ref|NP_394011.1| - 0.092 12.7 0.3 0.62 10.0 0.1 2.2 2 0 0 2 2 2 0 Cucumopine synthase C-terminal helical bundle domain Metallophos PF00149.28 gi|16082530|ref|NP_394012.1| - 1.6e-06 28.7 4.4 3.4e-06 27.7 4.3 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|16082530|ref|NP_394012.1| - 4.7e-05 23.6 0.0 7.9e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain LUD_dom PF02589.15 gi|16081646|ref|NP_394013.1| - 3.7e-44 150.7 0.2 4.9e-44 150.3 0.2 1.2 1 0 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 gi|16081646|ref|NP_394013.1| - 1.1e-08 35.4 1.2 2.9e-08 34.0 1.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081646|ref|NP_394013.1| - 2.2e-07 30.8 1.4 0.0061 16.6 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16081646|ref|NP_394013.1| - 3.9e-06 27.3 3.8 4.6e-05 23.9 4.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16081646|ref|NP_394013.1| - 3.2e-05 24.4 2.8 6.5e-05 23.4 2.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|16081646|ref|NP_394013.1| - 0.0003 21.7 2.5 0.00089 20.1 2.5 1.9 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|16081646|ref|NP_394013.1| - 0.00065 19.8 2.4 0.0026 17.9 2.6 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16081646|ref|NP_394013.1| - 0.0012 18.9 8.5 0.0074 16.3 1.7 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|16081646|ref|NP_394013.1| - 0.0039 17.0 3.7 0.21 11.4 0.4 2.4 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RuvA_C PF07499.13 gi|16081646|ref|NP_394013.1| - 0.0086 16.5 0.1 0.044 14.2 0.0 2.2 2 0 0 2 2 2 1 RuvA, C-terminal domain Fer4 PF00037.27 gi|16081646|ref|NP_394013.1| - 0.012 15.4 9.7 0.014 15.2 2.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|16081646|ref|NP_394013.1| - 0.024 14.8 0.7 2.2 8.5 0.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081646|ref|NP_394013.1| - 0.086 13.0 8.6 1.3 9.2 8.6 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|16081646|ref|NP_394013.1| - 0.09 13.6 3.2 2.4 9.0 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16081646|ref|NP_394013.1| - 0.12 13.0 6.7 0.32 11.6 0.5 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|16081646|ref|NP_394013.1| - 0.59 10.4 8.7 0.1 12.7 1.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain CCG PF02754.16 gi|16081647|ref|NP_394014.1| - 2e-06 27.9 0.0 8.9e-05 22.6 0.0 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|16081648|ref|NP_394015.1| - 1.5e-09 38.1 2.3 1.5e-09 38.1 2.3 1.7 2 0 0 2 2 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|16081648|ref|NP_394015.1| - 2e-09 37.6 0.0 1.5e-05 25.1 0.2 3.0 2 1 0 2 2 2 2 Cysteine-rich domain Fer4_7 PF12838.7 gi|16081648|ref|NP_394015.1| - 3.6e-09 37.1 5.0 1.1e-08 35.6 5.0 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16081648|ref|NP_394015.1| - 3.7e-07 30.6 4.5 3.8e-07 30.5 2.3 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16081648|ref|NP_394015.1| - 7.9e-07 29.1 4.1 7.9e-07 29.1 4.1 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16081648|ref|NP_394015.1| - 1.2e-05 25.0 19.3 0.00053 19.7 3.9 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|16081648|ref|NP_394015.1| - 1.3e-05 25.0 18.6 0.001 19.0 2.7 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|16081648|ref|NP_394015.1| - 1.4e-05 25.3 3.9 0.017 15.3 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081648|ref|NP_394015.1| - 5.8e-05 23.1 11.8 0.00049 20.2 10.3 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16081648|ref|NP_394015.1| - 6.3e-05 22.9 21.9 0.0039 17.2 2.7 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|16081648|ref|NP_394015.1| - 6.6e-05 23.1 15.7 0.0041 17.5 1.6 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16081648|ref|NP_394015.1| - 0.00092 20.1 9.6 0.13 13.2 0.7 2.8 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|16081648|ref|NP_394015.1| - 0.06 13.5 15.4 0.086 13.0 1.2 2.6 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|16081648|ref|NP_394015.1| - 0.34 11.5 8.0 6.3 7.4 0.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I FAD-oxidase_C PF02913.19 gi|16081649|ref|NP_394016.1| - 4e-65 219.9 0.0 5.7e-65 219.4 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|16081649|ref|NP_394016.1| - 5.7e-46 155.7 0.0 9.1e-46 155.0 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain DNA_pol_D_N PF18018.1 gi|16081649|ref|NP_394016.1| - 0.12 12.5 0.1 0.31 11.1 0.0 1.8 2 0 0 2 2 2 0 DNA polymerase delta subunit OB-fold domain PEGA PF08308.11 gi|16081650|ref|NP_394017.1| - 7.5e-15 54.6 2.1 6.1e-05 22.8 0.1 5.4 5 0 0 5 5 5 3 PEGA domain CarboxypepD_reg PF13620.6 gi|16081650|ref|NP_394017.1| - 0.00019 21.6 0.2 13 6.2 0.0 5.7 6 0 0 6 6 6 2 Carboxypeptidase regulatory-like domain PNK3P PF08645.11 gi|16081651|ref|NP_394018.1| - 6.2e-07 29.2 0.0 2.5e-06 27.3 0.0 1.8 1 1 0 1 1 1 1 Polynucleotide kinase 3 phosphatase HAD_2 PF13419.6 gi|16081651|ref|NP_394018.1| - 0.0011 19.1 0.0 0.51 10.4 0.0 2.2 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|16081651|ref|NP_394018.1| - 0.0017 18.4 0.0 0.0029 17.7 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like DUF1743 PF08489.11 gi|16081652|ref|NP_394019.1| - 7.7e-30 103.3 0.0 1.6e-29 102.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) OrfB_Zn_ribbon PF07282.11 gi|16081652|ref|NP_394019.1| - 0.038 13.9 0.8 0.071 13.0 0.8 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF2318 PF10080.9 gi|16081652|ref|NP_394019.1| - 0.061 13.4 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-Mss51 PF13824.6 gi|16081652|ref|NP_394019.1| - 0.12 12.5 0.6 0.26 11.4 0.6 1.5 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-H2C2_2 PF13465.6 gi|16081652|ref|NP_394019.1| - 0.14 12.6 0.9 5.1 7.7 0.9 2.4 1 1 0 1 1 1 0 Zinc-finger double domain HypA PF01155.19 gi|16081652|ref|NP_394019.1| - 0.15 12.1 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-HIT PF04438.16 gi|16081652|ref|NP_394019.1| - 0.7 9.8 3.6 1.4 8.8 3.6 1.5 1 1 0 1 1 1 0 HIT zinc finger zf-C2H2 PF00096.26 gi|16081652|ref|NP_394019.1| - 1.1 9.9 4.0 1.9 9.1 0.9 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type TF_Zn_Ribbon PF08271.12 gi|16081652|ref|NP_394019.1| - 2.1 7.9 4.3 8.8 5.9 4.0 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|16081652|ref|NP_394019.1| - 6.1 6.9 5.8 44 4.2 5.8 2.2 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Prenyltransf PF01255.19 gi|16081653|ref|NP_394020.1| - 7.6e-79 264.4 0.1 8.8e-79 264.1 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Vitellogenin_N PF01347.22 gi|16081654|ref|NP_394021.1| - 0.024 13.1 0.0 0.027 12.9 0.0 1.1 1 0 0 1 1 1 0 Lipoprotein amino terminal region MarR PF01047.22 gi|16081655|ref|NP_394023.1| - 3.9e-06 26.7 0.1 7.3e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|16081655|ref|NP_394023.1| - 1.3e-05 24.9 0.2 3.4e-05 23.6 0.1 1.7 2 0 0 2 2 2 1 MarR family GntR PF00392.21 gi|16081655|ref|NP_394023.1| - 0.00013 21.6 0.0 0.00032 20.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|16081655|ref|NP_394023.1| - 0.0013 18.6 0.3 0.0034 17.3 0.3 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|16081655|ref|NP_394023.1| - 0.0094 15.8 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|16081655|ref|NP_394023.1| - 0.016 15.1 0.1 0.1 12.5 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|16081655|ref|NP_394023.1| - 0.021 15.0 0.0 0.042 14.0 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|16081655|ref|NP_394023.1| - 0.03 14.8 0.2 0.2 12.2 0.0 2.3 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|16081655|ref|NP_394023.1| - 0.031 14.2 0.1 0.23 11.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|16081655|ref|NP_394023.1| - 0.13 11.8 0.0 0.33 10.5 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RHH_1 PF01402.21 gi|16082532|ref|NP_394024.1| - 5.9e-05 22.8 2.2 0.00054 19.8 2.3 2.2 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 gi|16082532|ref|NP_394024.1| - 0.0021 17.9 1.1 0.24 11.4 0.1 2.9 3 0 0 3 3 3 1 Ribbon-helix-helix domain BMFP PF04380.13 gi|16082532|ref|NP_394024.1| - 0.061 13.8 1.2 0.2 12.1 1.0 1.9 2 0 0 2 2 2 0 Membrane fusogenic activity tRNA_synthFbeta PF17759.1 gi|16081656|ref|NP_394025.1| - 6.4e-34 117.3 0.0 1e-33 116.6 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|16081656|ref|NP_394025.1| - 1.9e-10 40.9 0.1 6.5e-10 39.2 0.1 1.9 1 0 0 1 1 1 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|16081656|ref|NP_394025.1| - 1e-09 38.4 0.0 1.7e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain DUF3673 PF12425.8 gi|16081656|ref|NP_394025.1| - 0.14 12.1 0.1 0.37 10.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3673) Hexapep PF00132.24 gi|16081657|ref|NP_394026.1| - 7.3e-19 66.7 20.3 1.1e-06 28.1 2.0 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|16081657|ref|NP_394026.1| - 7.7e-06 25.6 23.5 0.0042 16.8 2.6 4.3 2 2 2 4 4 4 4 Hexapeptide repeat of succinyl-transferase HupF_HypC PF01455.18 gi|16081657|ref|NP_394026.1| - 0.0021 18.1 3.0 1 9.5 0.0 3.3 2 1 0 3 3 3 2 HupF/HypC family DUF4954 PF16314.5 gi|16081657|ref|NP_394026.1| - 0.045 11.9 7.0 0.032 12.4 4.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|16081657|ref|NP_394026.1| - 0.06 12.3 0.4 0.36 9.7 0.1 1.8 1 1 1 2 2 2 0 L-fucokinase Bactofilin PF04519.13 gi|16081657|ref|NP_394026.1| - 0.61 10.4 6.4 4.5 7.6 4.5 2.6 1 1 1 2 2 2 0 Polymer-forming cytoskeletal Arch_flagellin PF01917.16 gi|16081658|ref|NP_394027.1| - 7.1e-53 179.1 14.5 8.5e-53 178.9 14.5 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin FlaC_arch PF05377.11 gi|16081659|ref|NP_394028.1| - 9.6e-19 67.5 1.1 9.6e-19 67.5 1.1 2.8 3 0 0 3 3 2 1 Flagella accessory protein C (FlaC) DUF948 PF06103.11 gi|16081659|ref|NP_394028.1| - 0.00042 20.5 5.1 0.015 15.5 0.3 2.7 1 1 2 3 3 3 2 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 gi|16081659|ref|NP_394028.1| - 0.00067 19.7 1.7 0.04 13.9 0.4 2.1 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4795 PF16043.5 gi|16081659|ref|NP_394028.1| - 0.0019 17.8 4.0 0.17 11.5 0.5 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4795) MPS2 PF17060.5 gi|16081659|ref|NP_394028.1| - 0.0026 17.1 2.1 0.0028 17.0 2.1 1.1 1 0 0 1 1 1 1 Monopolar spindle protein 2 Spectrin PF00435.21 gi|16081659|ref|NP_394028.1| - 0.0027 18.2 0.2 0.0027 18.2 0.2 1.9 2 0 0 2 2 2 1 Spectrin repeat Mitofilin PF09731.9 gi|16081659|ref|NP_394028.1| - 0.008 15.1 5.0 0.0089 14.9 5.0 1.0 1 0 0 1 1 1 1 Mitochondrial inner membrane protein Tmemb_cc2 PF10267.9 gi|16081659|ref|NP_394028.1| - 0.0086 15.3 2.5 0.01 15.0 2.5 1.1 1 0 0 1 1 1 1 Predicted transmembrane and coiled-coil 2 protein NPV_P10 PF05531.12 gi|16081659|ref|NP_394028.1| - 0.011 16.1 3.0 0.64 10.5 3.0 2.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein KxDL PF10241.9 gi|16081659|ref|NP_394028.1| - 0.014 15.6 0.1 0.19 12.0 0.1 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein DLP_helical PF18709.1 gi|16081659|ref|NP_394028.1| - 0.019 14.2 1.7 0.026 13.7 0.5 1.8 1 1 0 1 1 1 0 Dynamin-like helical domain Spc7 PF08317.11 gi|16081659|ref|NP_394028.1| - 0.022 13.7 3.5 0.033 13.1 3.5 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein Fib_alpha PF08702.10 gi|16081659|ref|NP_394028.1| - 0.027 14.7 0.8 0.027 14.7 0.8 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 gi|16081659|ref|NP_394028.1| - 0.042 13.9 5.8 0.15 12.1 1.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Baculo_p24 PF05073.12 gi|16081659|ref|NP_394028.1| - 0.056 13.2 1.6 0.069 12.9 0.3 1.6 1 1 1 2 2 2 0 Baculovirus P24 capsid protein DUF16 PF01519.16 gi|16081659|ref|NP_394028.1| - 0.063 13.8 6.8 6 7.4 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 TolA_bind_tri PF16331.5 gi|16081659|ref|NP_394028.1| - 0.09 12.9 3.0 0.69 10.0 0.5 2.7 2 2 0 2 2 2 0 TolA binding protein trimerisation COG2 PF06148.11 gi|16081659|ref|NP_394028.1| - 0.1 12.7 1.3 4.6 7.3 1.1 2.4 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 WXG100 PF06013.12 gi|16081659|ref|NP_394028.1| - 0.1 12.8 0.8 11 6.3 0.0 3.0 3 1 1 4 4 3 0 Proteins of 100 residues with WXG Bacillus_HBL PF05791.11 gi|16081659|ref|NP_394028.1| - 0.11 12.3 4.5 0.86 9.4 3.3 2.3 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Cauli_AT PF03233.13 gi|16081659|ref|NP_394028.1| - 0.11 12.4 6.1 0.97 9.3 4.5 2.3 2 1 0 2 2 2 0 Aphid transmission protein Laminin_II PF06009.12 gi|16081659|ref|NP_394028.1| - 0.12 12.4 6.2 0.028 14.4 1.4 2.2 2 1 0 2 2 2 0 Laminin Domain II Phage_GPO PF05929.11 gi|16081659|ref|NP_394028.1| - 0.15 11.6 2.6 0.21 11.2 1.4 1.7 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase HisKA_3 PF07730.13 gi|16081659|ref|NP_394028.1| - 0.15 12.6 0.3 0.94 10.0 0.1 2.3 1 1 1 2 2 2 0 Histidine kinase YtxH PF12732.7 gi|16081659|ref|NP_394028.1| - 0.18 12.3 1.5 1.4 9.5 1.5 2.5 1 1 0 1 1 1 0 YtxH-like protein CdvA PF18822.1 gi|16081659|ref|NP_394028.1| - 0.29 11.0 5.3 2 8.3 0.4 2.8 1 1 1 2 2 2 0 CdvA-like coiled-coil domain BLOC1_2 PF10046.9 gi|16081659|ref|NP_394028.1| - 0.7 10.2 5.2 0.98 9.8 1.9 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Arch_fla_DE PF04659.13 gi|16081660|ref|NP_394029.1| - 3.5e-27 94.1 0.1 6.1e-27 93.3 0.1 1.4 1 0 0 1 1 1 1 Archaeal flagella protein DUF2959 PF11172.8 gi|16081660|ref|NP_394029.1| - 0.0089 16.2 0.1 0.32 11.1 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2959) PH_16 PF17838.1 gi|16081661|ref|NP_394030.1| - 0.0092 15.8 0.2 0.013 15.3 0.2 1.2 1 0 0 1 1 1 1 PH domain WhiA_N PF10298.9 gi|16081661|ref|NP_394030.1| - 0.096 12.8 0.4 0.15 12.1 0.4 1.2 1 0 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain Arch_flagellin PF01917.16 gi|16082646|ref|NP_394031.1| - 2.5e-15 57.1 9.0 2.8e-15 56.9 9.0 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin ATPase PF06745.13 gi|16081662|ref|NP_394032.1| - 4.4e-07 29.5 0.1 6.3e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 gi|16081662|ref|NP_394032.1| - 0.00041 19.7 0.2 0.0051 16.1 0.0 2.1 2 0 0 2 2 2 1 Rad51 IstB_IS21 PF01695.17 gi|16081662|ref|NP_394032.1| - 0.00066 19.5 0.1 0.93 9.2 0.1 2.1 1 1 1 2 2 2 2 IstB-like ATP binding protein RecA PF00154.21 gi|16081662|ref|NP_394032.1| - 0.0073 15.8 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein DnaB_C PF03796.15 gi|16081662|ref|NP_394032.1| - 0.026 13.9 0.1 0.071 12.4 0.1 1.9 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain Elong_Iki1 PF10483.9 gi|16081662|ref|NP_394032.1| - 0.062 12.8 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Elongator subunit Iki1 DUF1003 PF06210.11 gi|16081662|ref|NP_394032.1| - 0.085 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) T2SSE PF00437.20 gi|16081663|ref|NP_394033.1| - 1.6e-48 165.2 0.0 2.1e-48 164.7 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|16081663|ref|NP_394033.1| - 0.0055 17.2 0.0 0.013 16.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|16081663|ref|NP_394033.1| - 0.042 14.2 0.0 0.14 12.6 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|16081663|ref|NP_394033.1| - 0.042 13.6 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain DEAD PF00270.29 gi|16081663|ref|NP_394033.1| - 0.065 13.0 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase Dynamin_N PF00350.23 gi|16081663|ref|NP_394033.1| - 0.068 13.2 0.0 0.14 12.2 0.0 1.7 2 0 0 2 2 2 0 Dynamin family DUF1958 PF09211.10 gi|16081663|ref|NP_394033.1| - 0.11 12.8 0.5 0.21 11.9 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1958) AAA_7 PF12775.7 gi|16081663|ref|NP_394033.1| - 0.11 11.9 0.0 0.57 9.7 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_23 PF13476.6 gi|16081663|ref|NP_394033.1| - 0.14 12.6 0.1 0.6 10.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain T2SSF PF00482.23 gi|16081664|ref|NP_394034.1| - 1.3e-10 41.3 0.2 1.3e-10 41.3 0.2 3.6 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F TPR_19 PF14559.6 gi|16081665|ref|NP_394035.1| - 1.1e-27 96.3 6.7 0.0001 22.8 0.2 9.1 8 1 1 9 9 9 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16081665|ref|NP_394035.1| - 3.4e-21 74.1 6.8 0.002 18.8 0.2 11.0 9 4 4 13 13 10 5 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|16081665|ref|NP_394035.1| - 5.4e-15 55.4 7.6 4.6e-06 26.8 0.0 7.2 6 2 2 8 8 8 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 gi|16081665|ref|NP_394035.1| - 2.8e-14 53.4 3.8 0.00037 21.1 0.1 6.1 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|16081665|ref|NP_394035.1| - 1.6e-12 46.5 12.1 0.0048 16.9 0.0 8.5 9 0 0 9 9 8 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|16081665|ref|NP_394035.1| - 7.1e-10 38.5 4.5 0.023 13.9 0.2 5.8 4 2 1 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 gi|16081665|ref|NP_394035.1| - 1.6e-08 34.1 7.3 0.11 12.2 0.1 6.2 5 1 1 6 6 6 2 TPR repeat TPR_6 PF13174.6 gi|16081665|ref|NP_394035.1| - 4.8e-08 33.1 14.3 2.4 9.0 0.0 10.1 11 1 0 11 11 9 1 Tetratricopeptide repeat Clathrin PF00637.20 gi|16081665|ref|NP_394035.1| - 4.2e-07 29.9 3.2 0.066 13.1 0.0 6.1 4 2 2 6 6 6 1 Region in Clathrin and VPS BTAD PF03704.17 gi|16081665|ref|NP_394035.1| - 9.8e-07 29.3 1.2 0.015 15.7 0.1 4.4 4 1 1 5 5 4 2 Bacterial transcriptional activator domain TPR_1 PF00515.28 gi|16081665|ref|NP_394035.1| - 3.6e-06 26.6 5.0 0.095 12.6 0.1 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|16081665|ref|NP_394035.1| - 5.6e-05 22.9 2.7 6.9 6.9 0.1 7.3 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|16081665|ref|NP_394035.1| - 0.00083 19.1 3.6 9.1 6.3 0.3 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|16081665|ref|NP_394035.1| - 0.0014 19.1 0.2 0.57 11.0 0.0 4.2 4 0 0 4 4 3 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|16081665|ref|NP_394035.1| - 0.0015 17.6 3.0 0.061 12.2 0.0 3.2 2 1 1 3 3 3 1 NMDA receptor-regulated protein 1 SPOB_a PF14689.6 gi|16081665|ref|NP_394035.1| - 0.0056 16.4 2.9 2.4 7.9 0.0 6.0 5 0 0 5 5 5 1 Sensor_kinase_SpoOB-type, alpha-helical domain TPR_8 PF13181.6 gi|16081665|ref|NP_394035.1| - 0.0056 16.8 0.1 0.0056 16.8 0.1 7.7 10 1 1 11 11 6 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|16081665|ref|NP_394035.1| - 0.011 16.0 13.3 0.32 11.3 0.1 7.7 10 1 0 10 10 8 0 Tetratricopeptide repeat TPR_20 PF14561.6 gi|16081665|ref|NP_394035.1| - 0.019 15.3 0.2 16 5.9 0.0 5.1 5 1 0 5 5 4 0 Tetratricopeptide repeat TPR_9 PF13371.6 gi|16081665|ref|NP_394035.1| - 0.08 13.1 0.8 22 5.3 0.1 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat Type_III_YscG PF09477.10 gi|16081665|ref|NP_394035.1| - 0.09 12.9 0.2 9 6.4 0.0 3.7 4 0 0 4 4 3 0 Bacterial type II secretion system chaperone protein (type_III_yscG) TPR_17 PF13431.6 gi|16081665|ref|NP_394035.1| - 0.12 12.8 6.2 4.7 7.8 0.0 4.6 5 0 0 5 5 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|16081665|ref|NP_394035.1| - 0.14 12.2 0.8 10 6.3 0.1 3.9 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat Peptidase_M50 PF02163.22 gi|16081666|ref|NP_394036.1| - 6.8e-07 28.8 11.3 0.0001 21.7 0.2 3.2 2 1 1 3 3 3 3 Peptidase family M50 Resolvase PF00239.21 gi|16081667|ref|NP_394037.1| - 1.2e-16 61.1 0.0 1.8e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|16081667|ref|NP_394037.1| - 5.9e-09 36.0 0.2 1.5e-08 34.7 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain MerR_1 PF13411.6 gi|16081667|ref|NP_394037.1| - 2e-08 34.2 0.5 6e-08 32.7 0.1 1.9 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 gi|16081667|ref|NP_394037.1| - 1e-07 31.6 0.0 2e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein HTH_23 PF13384.6 gi|16081667|ref|NP_394037.1| - 0.057 13.2 0.4 0.19 11.6 0.1 2.0 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 gi|16081667|ref|NP_394037.1| - 0.13 12.4 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain OrfB_Zn_ribbon PF07282.11 gi|16081668|ref|NP_394038.1| - 1.2e-14 54.0 0.0 2.4e-14 53.0 0.0 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|16081668|ref|NP_394038.1| - 0.0032 17.7 5.4 0.0057 16.9 4.6 1.8 1 1 0 1 1 1 1 Probable transposase zf-FPG_IleRS PF06827.14 gi|16081668|ref|NP_394038.1| - 0.0051 16.6 0.9 3.7 7.5 0.0 3.6 3 1 0 3 3 3 1 Zinc finger found in FPG and IleRS Zn-ribbon_8 PF09723.10 gi|16081668|ref|NP_394038.1| - 0.04 14.0 0.5 9.5 6.4 0.0 3.0 3 0 0 3 3 3 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.12 gi|16081668|ref|NP_394038.1| - 0.063 13.6 2.1 2.3 8.6 1.0 2.5 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-ribbon_3 PF13248.6 gi|16081668|ref|NP_394038.1| - 0.44 10.0 1.9 7 6.2 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain ACCA PF03255.14 gi|16081668|ref|NP_394038.1| - 0.75 9.7 6.2 0.23 11.3 2.7 1.9 2 0 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Tho2 PF11262.8 gi|16081668|ref|NP_394038.1| - 1.5 8.0 10.7 0.19 10.9 6.6 1.6 2 0 0 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Glyco_transf_21 PF13506.6 gi|16082533|ref|NP_394039.1| - 1.7e-20 73.2 0.0 2.7e-20 72.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 gi|16082533|ref|NP_394039.1| - 7.6e-08 32.5 0.0 1.7e-07 31.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|16082533|ref|NP_394039.1| - 6.1e-06 26.1 0.0 1.8e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|16082533|ref|NP_394039.1| - 0.015 15.2 0.8 0.023 14.6 0.8 1.3 1 0 0 1 1 1 0 Glycosyl transferase family group 2 EF1_GNE PF00736.19 gi|16081669|ref|NP_394040.1| - 2.6e-18 66.0 2.0 2.8e-18 65.8 2.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain RRT14 PF17075.5 gi|16081669|ref|NP_394040.1| - 0.022 14.9 0.2 0.024 14.7 0.2 1.1 1 0 0 1 1 1 0 Regular of rDNA transcription protein 14 DUF1610 PF07754.11 gi|16081670|ref|NP_394041.1| - 7.6e-12 45.0 5.5 7.6e-12 45.0 5.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) DZR PF12773.7 gi|16081670|ref|NP_394041.1| - 0.0009 19.2 11.0 0.015 15.3 11.0 2.2 1 1 0 1 1 1 1 Double zinc ribbon Rubredoxin_2 PF18073.1 gi|16081670|ref|NP_394041.1| - 0.0042 16.8 18.8 0.036 13.8 0.6 3.8 3 1 0 3 3 3 2 Rubredoxin metal binding domain zf-ribbon_3 PF13248.6 gi|16081670|ref|NP_394041.1| - 0.037 13.4 14.2 2.2 7.8 3.7 3.4 3 1 0 3 3 3 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|16081670|ref|NP_394041.1| - 0.06 13.3 12.2 0.16 12.0 2.0 3.1 2 2 0 2 2 2 0 PhnA Zinc-Ribbon zf-CHY PF05495.12 gi|16081670|ref|NP_394041.1| - 0.062 13.8 8.8 0.16 12.4 5.7 2.0 1 1 1 2 2 2 0 CHY zinc finger Auto_anti-p27 PF06677.12 gi|16081670|ref|NP_394041.1| - 0.069 13.3 1.0 0.069 13.3 1.0 2.6 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) C1_2 PF03107.16 gi|16081670|ref|NP_394041.1| - 0.083 13.2 3.1 0.083 13.2 3.1 2.2 1 1 1 2 2 2 0 C1 domain OrfB_Zn_ribbon PF07282.11 gi|16081670|ref|NP_394041.1| - 0.11 12.5 10.0 0.94 9.5 10.0 2.0 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-FPG_IleRS PF06827.14 gi|16081670|ref|NP_394041.1| - 0.14 12.1 0.7 0.14 12.1 0.7 3.1 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS zinc_ribbon_2 PF13240.6 gi|16081670|ref|NP_394041.1| - 0.18 11.6 18.0 0.09 12.5 5.7 3.4 1 1 2 3 3 3 0 zinc-ribbon domain PolC_DP2 PF03833.13 gi|16081670|ref|NP_394041.1| - 0.2 9.5 5.2 0.2 9.5 5.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF1272 PF06906.11 gi|16081670|ref|NP_394041.1| - 0.2 11.8 12.7 2.4 8.3 2.1 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) FYVE_2 PF02318.16 gi|16081670|ref|NP_394041.1| - 0.33 11.2 7.1 0.93 9.7 7.1 1.7 1 1 0 1 1 1 0 FYVE-type zinc finger zf-UBR PF02207.20 gi|16081670|ref|NP_394041.1| - 0.33 11.1 9.9 3.7 7.8 9.9 2.2 1 1 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) zf-HIT PF04438.16 gi|16081670|ref|NP_394041.1| - 0.33 10.8 10.8 1.2 9.0 3.1 3.0 3 0 0 3 3 3 0 HIT zinc finger DUF2614 PF11023.8 gi|16081670|ref|NP_394041.1| - 0.5 10.5 2.0 0.52 10.4 2.0 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain HypA PF01155.19 gi|16081670|ref|NP_394041.1| - 0.69 10.0 9.0 0.93 9.5 0.2 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1_1 PF00130.22 gi|16081670|ref|NP_394041.1| - 0.93 9.4 8.6 2.4 8.1 1.6 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) NOB1_Zn_bind PF08772.11 gi|16081670|ref|NP_394041.1| - 1.1 9.5 9.9 0.39 10.9 4.4 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-B_box PF00643.24 gi|16081670|ref|NP_394041.1| - 1.2 9.4 11.9 2.3 8.5 7.9 2.7 2 1 0 2 2 2 0 B-box zinc finger Nudix_N_2 PF14803.6 gi|16081670|ref|NP_394041.1| - 1.3 9.0 14.5 3 7.8 8.3 3.0 2 1 0 2 2 2 0 Nudix N-terminal Chordopox_RPO7 PF05864.12 gi|16081670|ref|NP_394041.1| - 1.4 9.2 6.4 2.5 8.4 2.4 2.6 2 1 0 2 2 2 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Zn_Tnp_IS91 PF14319.6 gi|16081670|ref|NP_394041.1| - 2.6 8.1 9.9 37 4.4 9.9 2.4 1 1 0 1 1 1 0 Transposase zinc-binding domain Zn_Tnp_IS1595 PF12760.7 gi|16081670|ref|NP_394041.1| - 4.9 7.2 14.0 41 4.3 14.0 2.4 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF2321 PF10083.9 gi|16081670|ref|NP_394041.1| - 8.5 6.0 9.9 0.33 10.6 1.9 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) PGM_PMM_I PF02878.16 gi|16081671|ref|NP_394042.1| - 3.1e-41 140.3 0.1 1.1e-40 138.5 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|16081671|ref|NP_394042.1| - 6.7e-29 100.5 0.0 1.2e-28 99.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|16081671|ref|NP_394042.1| - 1.7e-25 89.5 0.0 2.9e-25 88.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|16081671|ref|NP_394042.1| - 2.8e-13 49.8 0.0 8.9e-13 48.2 0.0 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDP-OH_P_transf PF01066.21 gi|16081672|ref|NP_394043.1| - 7.9e-13 49.0 3.6 3.4e-12 46.9 0.2 2.5 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase NKAIN PF05640.14 gi|16081672|ref|NP_394043.1| - 0.22 10.8 3.3 0.61 9.3 3.3 1.7 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein AAA_18 PF13238.6 gi|16081673|ref|NP_394044.1| - 4.4e-13 49.9 1.1 1.7e-11 44.8 1.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|16081673|ref|NP_394044.1| - 3.6e-05 24.2 0.2 0.009 16.4 0.1 2.3 2 0 0 2 2 2 1 AAA domain CoaE PF01121.20 gi|16081673|ref|NP_394044.1| - 0.00028 20.6 0.1 0.0071 16.0 0.1 2.1 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_28 PF13521.6 gi|16081673|ref|NP_394044.1| - 0.00034 20.9 0.3 0.00072 19.8 0.1 1.6 2 0 0 2 2 2 1 AAA domain ATP_bind_2 PF03668.15 gi|16081673|ref|NP_394044.1| - 0.0015 17.9 0.1 0.0025 17.2 0.1 1.5 1 1 0 1 1 1 1 P-loop ATPase protein family AAA_33 PF13671.6 gi|16081673|ref|NP_394044.1| - 0.0027 17.9 0.1 0.19 11.9 0.0 2.1 1 1 1 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|16081673|ref|NP_394044.1| - 0.0072 16.0 0.1 2.7 7.6 0.0 2.1 2 0 0 2 2 2 2 Thymidylate kinase dNK PF01712.19 gi|16081673|ref|NP_394044.1| - 0.021 14.7 0.5 0.42 10.4 0.1 2.1 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA PF00004.29 gi|16081673|ref|NP_394044.1| - 0.024 15.1 0.0 0.046 14.1 0.0 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|16081673|ref|NP_394044.1| - 0.026 14.5 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_22 PF13401.6 gi|16081673|ref|NP_394044.1| - 0.026 14.8 0.2 0.063 13.5 0.2 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16081673|ref|NP_394044.1| - 0.052 13.9 0.1 0.097 13.0 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|16081673|ref|NP_394044.1| - 0.12 12.9 0.3 0.32 11.5 0.3 1.5 1 1 0 1 1 1 0 ABC transporter Cytidylate_kin2 PF13189.6 gi|16081673|ref|NP_394044.1| - 0.16 12.1 0.4 1.5 8.9 0.0 2.0 1 1 1 2 2 2 0 Cytidylate kinase-like family AAA_30 PF13604.6 gi|16081673|ref|NP_394044.1| - 0.2 11.3 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|16081673|ref|NP_394044.1| - 0.26 10.5 0.1 0.26 10.5 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Aminotran_3 PF00202.21 gi|16081674|ref|NP_394045.1| - 2e-64 217.8 0.0 2.6e-64 217.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.20 gi|16081675|ref|NP_394046.1| - 4e-63 212.6 0.0 5.2e-63 212.2 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|16081675|ref|NP_394046.1| - 2.3e-05 24.7 0.0 6.3e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 Porphobilinogen deaminase, C-terminal domain HEM4 PF02602.15 gi|16081676|ref|NP_394047.1| - 3.8e-21 75.5 0.0 4.4e-21 75.3 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD PyrI PF01948.18 gi|16081677|ref|NP_394048.1| - 1.4e-32 111.8 1.2 5.3e-32 109.9 1.3 1.8 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|16081677|ref|NP_394048.1| - 4e-18 65.0 2.8 4e-18 65.0 2.8 1.6 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|16081678|ref|NP_394049.1| - 1.1e-47 161.8 0.0 4.1e-47 159.9 0.0 1.8 1 1 1 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|16081678|ref|NP_394049.1| - 9.9e-31 106.9 0.0 1.4e-30 106.4 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Lgl_C PF08596.10 gi|16081678|ref|NP_394049.1| - 0.027 13.2 0.0 0.036 12.8 0.0 1.3 1 0 0 1 1 1 0 Lethal giant larvae(Lgl) like, C-terminal YcxB PF14317.6 gi|16081678|ref|NP_394049.1| - 0.065 12.9 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 YcxB-like protein AAA_lid_2 PF17863.1 gi|16081679|ref|NP_394050.1| - 5e-15 55.1 0.2 1.5e-14 53.6 0.2 1.8 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|16081679|ref|NP_394050.1| - 8e-12 45.0 0.0 1.2e-10 41.2 0.0 2.2 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI VWA_2 PF13519.6 gi|16081679|ref|NP_394050.1| - 9.3e-11 42.3 0.2 6.6e-10 39.6 0.0 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain AAA_5 PF07728.14 gi|16081679|ref|NP_394050.1| - 5.1e-10 39.5 0.2 0.00039 20.4 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) VWA_CoxE PF05762.14 gi|16081679|ref|NP_394050.1| - 4.1e-07 29.6 1.1 9.3e-07 28.5 1.1 1.5 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein MCM PF00493.23 gi|16081679|ref|NP_394050.1| - 6.4e-06 25.4 0.2 0.00016 20.8 0.0 2.6 3 0 0 3 3 3 1 MCM P-loop domain AAA_16 PF13191.6 gi|16081679|ref|NP_394050.1| - 0.00087 19.7 0.0 0.0028 18.0 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase_C PF13335.6 gi|16081679|ref|NP_394050.1| - 0.00093 19.8 2.1 0.0014 19.2 0.5 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI C-terminal Sigma54_activat PF00158.26 gi|16081679|ref|NP_394050.1| - 0.0038 16.9 0.0 0.63 9.7 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_22 PF13401.6 gi|16081679|ref|NP_394050.1| - 0.0044 17.3 0.0 0.022 15.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|16081679|ref|NP_394050.1| - 0.0085 16.5 0.1 0.062 13.7 0.0 2.4 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) VWA PF00092.28 gi|16081679|ref|NP_394050.1| - 0.029 14.6 0.0 0.095 12.9 0.0 1.8 2 0 0 2 2 2 0 von Willebrand factor type A domain AAA_2 PF07724.14 gi|16081679|ref|NP_394050.1| - 0.097 12.8 0.0 0.26 11.4 0.0 1.8 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|16081679|ref|NP_394050.1| - 0.14 11.6 0.0 0.31 10.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region MCM_lid PF17855.1 gi|16081679|ref|NP_394050.1| - 0.54 10.7 2.5 0.63 10.5 0.2 2.3 2 0 0 2 2 2 0 MCM AAA-lid domain AAA_lid_8 PF17868.1 gi|16081679|ref|NP_394050.1| - 1.1 9.2 3.2 1.7 8.6 0.1 2.7 3 0 0 3 3 3 0 AAA lid domain DAO PF01266.24 gi|16081680|ref|NP_394051.1| - 8.1e-49 167.1 0.0 9.3e-49 166.9 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|16081680|ref|NP_394051.1| - 6.5e-06 25.6 0.0 0.0019 17.5 0.0 3.2 1 1 2 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|16081680|ref|NP_394051.1| - 3.4e-05 23.2 0.0 5.6e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 gi|16081680|ref|NP_394051.1| - 0.00026 21.1 0.0 0.00051 20.2 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|16081680|ref|NP_394051.1| - 0.0016 18.5 0.1 0.0026 17.7 0.1 1.3 1 0 0 1 1 1 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 gi|16081680|ref|NP_394051.1| - 0.0034 16.5 0.1 0.0091 15.1 0.1 1.8 1 1 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|16081680|ref|NP_394051.1| - 0.019 15.5 0.1 19 5.9 0.0 3.4 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|16081680|ref|NP_394051.1| - 0.041 12.9 0.0 0.065 12.3 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein K_oxygenase PF13434.6 gi|16081680|ref|NP_394051.1| - 0.071 12.2 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 gi|16081680|ref|NP_394051.1| - 0.1 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain SNARE_assoc PF09335.11 gi|16081681|ref|NP_394052.1| - 3e-22 79.4 9.8 3e-22 79.4 9.8 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein ABM PF03992.16 gi|16081682|ref|NP_394053.1| - 6.5e-11 42.2 0.0 7.9e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SOR PF07682.11 gi|16081682|ref|NP_394053.1| - 0.00079 18.4 0.8 0.22 10.3 0.0 2.1 1 1 1 2 2 2 2 Sulphur oxygenase reductase DUF4936 PF16290.5 gi|16081682|ref|NP_394053.1| - 0.0031 18.2 0.0 0.0038 17.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4936) MFS_3 PF05977.13 gi|16081682|ref|NP_394053.1| - 0.1 11.0 0.0 0.1 11.0 0.0 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector Methyltransf_23 PF13489.6 gi|16081683|ref|NP_394054.1| - 1.2e-06 28.5 0.0 2.1e-06 27.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|16081683|ref|NP_394054.1| - 2.5e-06 27.0 0.0 3.8e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_25 PF13649.6 gi|16081683|ref|NP_394054.1| - 5.3e-06 27.0 0.0 1.5e-05 25.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16081683|ref|NP_394054.1| - 1.2e-05 25.9 0.0 3.1e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16081683|ref|NP_394054.1| - 0.0012 18.6 0.0 0.0023 17.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|16081683|ref|NP_394054.1| - 0.0028 17.2 0.0 0.0043 16.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|16081683|ref|NP_394054.1| - 0.0034 18.1 0.0 0.0063 17.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0146 PF03686.13 gi|16081683|ref|NP_394054.1| - 0.0055 16.6 0.0 0.0087 15.9 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) TPMT PF05724.11 gi|16081683|ref|NP_394054.1| - 0.059 13.0 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|16081683|ref|NP_394054.1| - 0.1 12.6 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain MFS_1 PF07690.16 gi|16081684|ref|NP_394055.1| - 2e-40 138.8 66.6 4.2e-35 121.3 42.5 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16081684|ref|NP_394055.1| - 9.9e-24 84.0 36.8 2.2e-19 69.7 14.2 2.9 1 1 2 3 3 3 3 Sugar (and other) transporter Thiolase_N PF00108.23 gi|16081685|ref|NP_394056.1| - 2.3e-79 266.5 0.1 2.8e-79 266.1 0.1 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|16081685|ref|NP_394056.1| - 4.3e-37 126.5 0.0 8e-37 125.6 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|16081685|ref|NP_394056.1| - 3.3e-06 26.9 1.5 7.2e-06 25.8 0.8 1.7 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ALP_N PF17989.1 gi|16081686|ref|NP_394057.1| - 2e-23 83.2 0.0 2.8e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Actin like proteins N terminal domain MutL PF13941.6 gi|16081686|ref|NP_394057.1| - 0.0042 15.7 0.1 0.013 14.1 0.1 1.6 1 1 1 2 2 2 1 MutL protein PerC PF06069.11 gi|16081687|ref|NP_394058.1| - 0.031 14.5 0.0 0.054 13.7 0.0 1.4 1 0 0 1 1 1 0 PerC transcriptional activator DUF2683 PF10884.8 gi|16081687|ref|NP_394058.1| - 0.033 14.4 6.0 0.13 12.5 3.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2683) Ribosomal_S17 PF00366.20 gi|16081687|ref|NP_394058.1| - 0.067 13.3 0.2 0.12 12.5 0.1 1.5 1 1 0 1 1 1 0 Ribosomal protein S17 DrsE PF02635.15 gi|16082647|ref|NP_394059.1| - 1.8e-12 47.7 0.3 2.2e-12 47.4 0.3 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|16082647|ref|NP_394059.1| - 0.0013 18.7 0.3 0.0015 18.5 0.3 1.2 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family TauE PF01925.19 gi|16081688|ref|NP_394060.1| - 1.1e-52 179.1 30.8 1.2e-52 178.9 30.8 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE EMP70 PF02990.16 gi|16081688|ref|NP_394060.1| - 7.1e-05 21.7 2.5 7.1e-05 21.7 2.5 1.6 1 1 0 1 1 1 1 Endomembrane protein 70 DUF2615 PF11027.8 gi|16081688|ref|NP_394060.1| - 0.033 14.3 0.0 0.09 12.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) Phageshock_PspD PF09584.10 gi|16081688|ref|NP_394060.1| - 4.2 7.5 6.4 0.55 10.3 0.4 2.5 2 1 1 3 3 3 0 Phage shock protein PspD (Phageshock_PspD) DUF1304 PF06993.12 gi|16081688|ref|NP_394060.1| - 7.8 6.5 15.9 4.5 7.3 0.3 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1304) DEAD_assoc PF08494.11 gi|16081689|ref|NP_394061.1| - 6.9e-51 172.8 0.0 1.4e-50 171.7 0.0 1.6 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|16081689|ref|NP_394061.1| - 2.9e-28 98.8 0.0 2.4e-27 95.8 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|16081689|ref|NP_394061.1| - 2.6e-16 59.9 0.6 1.7e-15 57.3 0.1 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|16081689|ref|NP_394061.1| - 9.3e-09 35.5 0.0 2.5e-08 34.1 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|16081689|ref|NP_394061.1| - 0.00019 21.8 0.0 0.0068 16.8 0.0 3.5 4 0 0 4 4 4 1 AAA domain TrmB PF01978.19 gi|16081689|ref|NP_394061.1| - 0.002 17.9 4.8 0.14 12.0 0.0 4.7 5 0 0 5 5 5 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|16081689|ref|NP_394061.1| - 0.0021 17.9 8.4 4.1 7.3 0.1 4.7 4 0 0 4 4 4 3 TFIIE alpha subunit HTH_9 PF08221.11 gi|16081689|ref|NP_394061.1| - 0.052 13.7 0.0 30 4.8 0.0 3.3 3 0 0 3 3 3 0 RNA polymerase III subunit RPC82 helix-turn-helix domain SNF2_N PF00176.23 gi|16081689|ref|NP_394061.1| - 0.16 10.7 0.0 0.7 8.5 0.0 2.0 3 0 0 3 3 3 0 SNF2 family N-terminal domain Usp PF00582.26 gi|16081690|ref|NP_394062.1| - 6.4e-22 78.6 0.0 8e-22 78.3 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Ribosomal_S17e PF00833.18 gi|16081691|ref|NP_394063.1| - 3.1e-09 36.8 0.7 3.5e-09 36.6 0.7 1.0 1 0 0 1 1 1 1 Ribosomal S17 Mucin_bdg PF03272.13 gi|16081692|ref|NP_394064.1| - 0.026 14.6 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Putative mucin or carbohydrate-binding module DUF1189 PF06691.11 gi|16082648|ref|NP_394065.1| - 0.032 13.8 1.4 0.032 13.8 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) MWFE PF15879.5 gi|16082648|ref|NP_394065.1| - 0.11 12.7 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit Phage_holin_3_6 PF07332.11 gi|16082648|ref|NP_394065.1| - 0.18 11.8 2.1 0.21 11.6 2.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III FUSC-like PF12805.7 gi|16082648|ref|NP_394065.1| - 1.9 7.5 4.3 2.1 7.3 4.3 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS PhoR PF11808.8 gi|16082648|ref|NP_394065.1| - 7.2 7.1 8.8 0.61 10.5 2.2 1.9 1 1 1 2 2 2 0 Phosphate regulon sensor protein PhoR AAA_10 PF12846.7 gi|16081693|ref|NP_394066.1| - 5.4e-13 48.6 0.7 8e-07 28.3 0.8 2.4 1 1 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|16081693|ref|NP_394066.1| - 2e-08 34.6 0.7 1.3e-07 32.0 0.0 2.2 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|16081693|ref|NP_394066.1| - 2.2e-05 24.8 0.0 4.4e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|16081693|ref|NP_394066.1| - 0.0065 15.8 0.0 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family T2SSE PF00437.20 gi|16081693|ref|NP_394066.1| - 0.011 14.8 0.0 0.024 13.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein Sigma54_activat PF00158.26 gi|16081693|ref|NP_394066.1| - 0.022 14.5 0.0 0.043 13.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|16081693|ref|NP_394066.1| - 0.027 14.2 0.0 0.18 11.5 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein TraG-D_C PF12696.7 gi|16081693|ref|NP_394066.1| - 0.042 13.9 0.1 5 7.1 0.0 2.6 3 0 0 3 3 3 0 TraM recognition site of TraD and TraG AAA_30 PF13604.6 gi|16081693|ref|NP_394066.1| - 0.054 13.2 0.1 0.28 10.9 0.1 1.9 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|16081693|ref|NP_394066.1| - 0.075 13.4 0.0 4 7.9 0.0 2.8 2 0 0 2 2 2 0 RNA helicase Zot PF05707.12 gi|16081693|ref|NP_394066.1| - 0.084 12.5 0.2 0.27 10.9 0.2 1.8 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) DUF1056 PF06341.11 gi|16081694|ref|NP_394067.1| - 0.04 14.2 2.7 0.21 11.9 2.7 2.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1056) GARS_A PF01071.19 gi|16082534|ref|NP_394068.1| - 7.1e-52 176.0 0.0 9.6e-52 175.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|16082534|ref|NP_394068.1| - 5.6e-16 59.1 0.0 1.3e-15 57.9 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|16082534|ref|NP_394068.1| - 2.3e-07 31.0 0.0 2.9e-06 27.4 0.0 2.4 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.6 gi|16082534|ref|NP_394068.1| - 0.074 12.6 0.1 0.24 11.0 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain GFO_IDH_MocA PF01408.22 gi|16082534|ref|NP_394068.1| - 0.15 12.9 0.0 0.35 11.7 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold SMC_ScpB PF04079.16 gi|16081695|ref|NP_394069.1| - 1.1e-27 96.7 0.4 1.2e-27 96.5 0.4 1.0 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB RelB_N PF18506.1 gi|16081695|ref|NP_394069.1| - 0.058 13.2 0.0 0.2 11.5 0.0 1.9 2 0 0 2 2 2 0 RelB Antitoxin alpha helical domain DUF2250 PF10007.9 gi|16081695|ref|NP_394069.1| - 0.063 13.4 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Fe_dep_repress PF01325.19 gi|16081695|ref|NP_394069.1| - 0.13 12.5 0.7 6 7.1 0.1 2.7 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain Transp_cyt_pur PF02133.15 gi|16081696|ref|NP_394070.1| - 1.1e-26 93.6 44.6 3e-26 92.2 44.6 1.6 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin FixQ PF05545.11 gi|16081696|ref|NP_394070.1| - 3.6 7.6 9.7 3.3 7.8 0.0 4.0 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ dUTPase PF00692.19 gi|16082535|ref|NP_394071.1| - 2.6e-18 65.9 0.0 3.4e-18 65.6 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|16082535|ref|NP_394071.1| - 3.7e-06 26.0 0.0 4.6e-05 22.4 0.0 2.0 1 1 1 2 2 2 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 4HBT PF03061.22 gi|16081697|ref|NP_394072.1| - 1.3e-16 60.7 0.0 1.7e-16 60.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily UPF0147 PF03685.13 gi|16081698|ref|NP_394073.1| - 1.1e-31 108.7 0.2 1.2e-31 108.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|16081698|ref|NP_394073.1| - 0.017 15.4 0.1 5.1 7.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) Abi_C PF14355.6 gi|16081698|ref|NP_394073.1| - 0.053 13.6 0.0 0.063 13.4 0.0 1.3 1 1 0 1 1 1 0 Abortive infection C-terminus SMC_ScpB PF04079.16 gi|16081699|ref|NP_394074.1| - 0.0001 22.0 0.0 0.00014 21.5 0.0 1.3 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB MarR_2 PF12802.7 gi|16081699|ref|NP_394074.1| - 0.00029 20.7 0.0 0.0004 20.2 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|16081699|ref|NP_394074.1| - 0.003 17.4 0.1 0.011 15.6 0.0 1.9 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2582 PF10771.9 gi|16081699|ref|NP_394074.1| - 0.015 15.4 0.1 0.029 14.5 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix domain (DUF2582) Rrf2 PF02082.20 gi|16081699|ref|NP_394074.1| - 0.022 15.1 0.0 0.058 13.8 0.0 1.8 1 1 0 1 1 1 0 Transcriptional regulator DUF3918 PF13056.6 gi|16081699|ref|NP_394074.1| - 0.035 13.7 0.1 0.072 12.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) HTH_34 PF13601.6 gi|16081699|ref|NP_394074.1| - 0.056 13.6 0.0 0.083 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|16081699|ref|NP_394074.1| - 0.062 13.3 0.0 0.16 12.0 0.0 1.8 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain Dioxygenase_N PF04444.14 gi|16081699|ref|NP_394074.1| - 0.12 12.2 0.1 5.7 6.9 0.0 2.2 2 0 0 2 2 2 0 Catechol dioxygenase N terminus Sp38 PF07354.12 gi|16081699|ref|NP_394074.1| - 0.2 11.1 0.0 0.28 10.6 0.0 1.2 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) DUF2842 PF11003.8 gi|16081700|ref|NP_394075.1| - 8.2 6.8 15.7 1 9.6 1.4 4.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2842) Aldedh PF00171.22 gi|16081701|ref|NP_394076.1| - 1.3e-125 419.5 0.0 1.8e-125 419.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|16081701|ref|NP_394076.1| - 5.3e-05 22.5 0.0 0.0004 19.5 0.0 2.2 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) Polysacc_synt PF01943.17 gi|16081702|ref|NP_394077.1| - 2.5e-11 43.5 24.5 2.5e-11 43.5 24.5 3.1 1 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|16081702|ref|NP_394077.1| - 8.3e-07 29.2 13.6 8.3e-07 29.2 13.6 4.4 1 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain eIF-5_eIF-2B PF01873.17 gi|16081703|ref|NP_394078.1| - 5.1e-34 116.7 0.2 9.7e-34 115.7 0.2 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|16081703|ref|NP_394078.1| - 2.4e-09 37.1 3.1 4.2e-09 36.2 3.1 1.4 1 0 0 1 1 1 1 TRAM domain Elf1 PF05129.13 gi|16081703|ref|NP_394078.1| - 0.012 15.6 0.5 0.036 14.1 0.1 1.8 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like Zn-ribbon_8 PF09723.10 gi|16081703|ref|NP_394078.1| - 0.034 14.3 0.2 0.067 13.3 0.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|16081703|ref|NP_394078.1| - 0.063 13.2 0.1 0.14 12.1 0.1 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C2H2_2 PF12756.7 gi|16081703|ref|NP_394078.1| - 0.14 12.5 0.6 0.35 11.2 0.1 1.9 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Lar_restr_allev PF14354.6 gi|16081703|ref|NP_394078.1| - 0.15 12.5 1.3 3 8.3 1.6 2.2 1 1 1 2 2 2 0 Restriction alleviation protein Lar CSD2 PF17876.1 gi|16081703|ref|NP_394078.1| - 0.16 12.2 2.6 0.33 11.1 0.8 2.1 1 1 1 2 2 2 0 Cold shock domain RHH_8 PF17723.1 gi|16081704|ref|NP_394079.1| - 0.00011 22.4 0.3 0.022 14.9 0.1 2.2 1 1 1 2 2 2 2 Ribbon-Helix-Helix transcriptional regulator family RHH_6 PF16762.5 gi|16081704|ref|NP_394079.1| - 0.015 15.9 0.6 0.063 13.9 0.1 2.0 2 0 0 2 2 2 0 Ribbon-helix-helix domain TRAPPC-Trs85 PF12739.7 gi|16081704|ref|NP_394079.1| - 0.14 11.1 0.2 0.26 10.2 0.2 1.5 1 1 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit RHH_1 PF01402.21 gi|16081704|ref|NP_394079.1| - 0.36 10.8 2.7 1.2 9.1 0.1 2.8 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family Tubulin PF00091.25 gi|16082536|ref|NP_394080.1| - 8.3e-05 22.9 0.0 0.00057 20.1 0.0 2.0 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain AsnC_trans_reg PF01037.21 gi|16081705|ref|NP_394081.1| - 8.8e-15 54.4 0.0 2.5e-14 53.0 0.0 1.7 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|16081705|ref|NP_394081.1| - 2.5e-10 39.8 1.1 2.3e-08 33.5 0.4 2.2 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|16081705|ref|NP_394081.1| - 4.9e-08 32.7 0.5 9.8e-08 31.7 0.1 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|16081705|ref|NP_394081.1| - 2.5e-06 27.2 0.0 5.9e-06 26.1 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|16081705|ref|NP_394081.1| - 0.0013 18.5 0.0 0.0036 17.1 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_8 PF02954.19 gi|16081705|ref|NP_394081.1| - 0.0024 17.6 0.0 0.0057 16.4 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_5 PF01022.20 gi|16081705|ref|NP_394081.1| - 0.019 14.8 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|16081705|ref|NP_394081.1| - 0.06 13.8 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|16081705|ref|NP_394081.1| - 0.14 12.3 0.1 0.31 11.2 0.1 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) tRNA-synt_2 PF00152.20 gi|16082537|ref|NP_394082.1| - 1.7e-52 178.5 0.1 2e-52 178.2 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) MFS_1 PF07690.16 gi|16081706|ref|NP_394083.1| - 1.3e-41 142.8 57.8 5.7e-31 107.7 26.5 2.3 2 1 0 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|16081706|ref|NP_394083.1| - 8e-07 27.8 7.5 8e-07 27.8 7.5 1.8 2 0 0 2 2 2 1 Transmembrane secretion effector OATP PF03137.20 gi|16081706|ref|NP_394083.1| - 1.9 6.6 13.5 0.17 10.1 3.5 2.6 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family CBS PF00571.28 gi|16081707|ref|NP_394084.1| - 3.3e-23 81.9 0.6 5.9e-15 55.5 0.3 2.6 3 0 0 3 3 3 2 CBS domain DUF1149 PF06619.11 gi|16081707|ref|NP_394084.1| - 0.0089 16.3 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1149) MAP7 PF05672.11 gi|16081707|ref|NP_394084.1| - 0.22 11.2 0.1 1.6 8.4 0.0 1.9 2 0 0 2 2 2 0 MAP7 (E-MAP-115) family Proteasome PF00227.26 gi|16081708|ref|NP_394085.1| - 1.6e-52 177.8 1.6 1.8e-52 177.6 1.6 1.0 1 0 0 1 1 1 1 Proteasome subunit KH_7 PF17214.3 gi|16082538|ref|NP_394086.1| - 2.7e-28 97.7 4.9 1.9e-25 88.6 0.9 3.2 3 0 0 3 3 3 2 KH domain Beta-Casp PF10996.8 gi|16082538|ref|NP_394086.1| - 2.6e-23 82.4 0.0 1.4e-22 80.1 0.0 2.2 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.27 gi|16082538|ref|NP_394086.1| - 9.5e-15 55.1 0.4 4.1e-14 53.0 0.4 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|16082538|ref|NP_394086.1| - 4.2e-14 52.2 0.1 1.3e-13 50.7 0.0 1.9 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|16082538|ref|NP_394086.1| - 3.4e-12 46.2 0.0 7.5e-12 45.1 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|16082538|ref|NP_394086.1| - 2.2e-06 27.4 0.0 4.1e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|16082538|ref|NP_394086.1| - 0.017 15.0 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain TAL_FSA PF00923.19 gi|16081710|ref|NP_394088.1| - 1e-61 208.8 0.4 5e-61 206.6 0.4 1.9 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase ALAD PF00490.21 gi|16081710|ref|NP_394088.1| - 0.029 13.5 0.1 1.6 7.8 0.0 2.2 1 1 1 2 2 2 0 Delta-aminolevulinic acid dehydratase FANCI_S1-cap PF14674.6 gi|16081710|ref|NP_394088.1| - 0.036 14.1 0.0 0.13 12.4 0.0 1.9 2 0 0 2 2 2 0 FANCI solenoid 1 cap CRF PF00473.17 gi|16081710|ref|NP_394088.1| - 0.17 12.0 0.1 4.7 7.4 0.0 2.6 2 0 0 2 2 2 0 Corticotropin-releasing factor family Transket_pyr PF02779.24 gi|16081711|ref|NP_394089.1| - 4.9e-36 124.1 0.0 6.9e-36 123.6 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|16081711|ref|NP_394089.1| - 9.7e-32 109.5 0.1 1.9e-31 108.5 0.0 1.5 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|16081711|ref|NP_394089.1| - 0.003 17.8 0.2 0.018 15.4 0.0 2.2 3 0 0 3 3 3 1 Pyruvate:ferredoxin oxidoreductase core domain II MoCF_biosynth PF00994.24 gi|16081711|ref|NP_394089.1| - 0.0078 15.9 0.1 0.021 14.5 0.1 1.8 1 1 0 1 1 1 1 Probable molybdopterin binding domain Transketolase_N PF00456.21 gi|16081712|ref|NP_394090.1| - 4.6e-57 193.5 0.0 6.5e-57 193.0 0.0 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|16081712|ref|NP_394090.1| - 5.7e-10 38.8 0.1 9.3e-07 28.3 0.1 2.9 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 gi|16081712|ref|NP_394090.1| - 4e-07 29.9 0.2 8.8e-06 25.6 0.2 2.1 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 gi|16081712|ref|NP_394090.1| - 5.4e-05 22.2 0.1 8.1e-05 21.6 0.1 1.3 1 0 0 1 1 1 1 XFP N-terminal domain E1_dh PF00676.20 gi|16081712|ref|NP_394090.1| - 0.028 13.4 0.1 0.047 12.6 0.1 1.4 1 1 0 1 1 1 0 Dehydrogenase E1 component DHDPS PF00701.22 gi|16081713|ref|NP_394091.1| - 4.3e-35 120.8 0.0 5.8e-35 120.4 0.0 1.1 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family AA_permease_2 PF13520.6 gi|16081714|ref|NP_394092.1| - 1.6e-24 86.5 60.4 1.6e-24 86.5 60.4 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 gi|16081714|ref|NP_394092.1| - 1.4e-18 66.7 47.3 1.4e-18 66.7 47.3 2.3 1 1 1 2 2 2 1 Amino acid permease ACT_7 PF13840.6 gi|16081715|ref|NP_394093.1| - 0.012 15.4 0.0 0.029 14.1 0.0 1.7 1 0 0 1 1 1 0 ACT domain NAD_kinase PF01513.21 gi|16081716|ref|NP_394094.1| - 3.4e-52 177.5 0.2 4e-52 177.2 0.2 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|16081716|ref|NP_394094.1| - 0.044 13.4 0.1 0.077 12.6 0.1 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Prok-JAB PF14464.6 gi|16081717|ref|NP_394095.1| - 3.8e-08 33.1 0.4 2.2e-07 30.6 0.4 1.9 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|16081717|ref|NP_394095.1| - 0.0086 16.0 0.1 0.012 15.5 0.1 1.5 1 1 0 1 1 1 1 RadC-like JAB domain Ribosomal_S17e PF00833.18 gi|16081718|ref|NP_394096.1| - 0.028 14.3 0.4 0.046 13.6 0.2 1.4 2 0 0 2 2 2 0 Ribosomal S17 His_Phos_1 PF00300.22 gi|16082539|ref|NP_394097.1| - 4.2e-28 98.4 0.0 4.8e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Methyltransf_17 PF12692.7 gi|16082539|ref|NP_394097.1| - 0.0076 16.3 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 S-adenosyl-L-methionine methyltransferase Skp1 PF01466.19 gi|16082539|ref|NP_394097.1| - 0.013 15.6 0.1 0.032 14.4 0.1 1.6 1 0 0 1 1 1 0 Skp1 family, dimerisation domain POR PF01558.18 gi|16082540|ref|NP_394098.1| - 3.1e-39 134.9 0.5 3.7e-39 134.6 0.5 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 gi|16081719|ref|NP_394099.1| - 3.4e-13 48.8 20.2 2.3e-07 30.3 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|16081719|ref|NP_394099.1| - 2.1e-09 37.0 18.0 4.4e-05 23.4 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16081719|ref|NP_394099.1| - 1.1e-08 35.5 26.9 1.8e-07 31.6 13.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081719|ref|NP_394099.1| - 2.4e-08 34.0 12.9 3.8e-08 33.3 12.9 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16081719|ref|NP_394099.1| - 8.9e-08 31.8 11.8 5.4e-05 23.0 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16081719|ref|NP_394099.1| - 1.4e-07 32.4 12.7 0.00063 20.6 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|16081719|ref|NP_394099.1| - 2.5e-07 30.7 12.9 4.7e-07 29.9 13.0 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081719|ref|NP_394099.1| - 1.5e-06 28.2 14.8 9.6e-06 25.6 12.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|16081719|ref|NP_394099.1| - 0.0003 21.2 10.7 0.00052 20.4 10.7 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|16081719|ref|NP_394099.1| - 0.00032 21.2 12.4 0.0021 18.6 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|16081719|ref|NP_394099.1| - 0.00049 20.8 8.0 0.27 12.0 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|16081719|ref|NP_394099.1| - 0.0038 17.7 14.9 0.036 14.6 15.5 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16081719|ref|NP_394099.1| - 0.015 15.7 16.1 0.064 13.8 3.0 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain DUF1335 PF07056.11 gi|16081719|ref|NP_394099.1| - 0.044 13.9 0.0 0.083 13.0 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1335) Fer4_22 PF17179.4 gi|16081719|ref|NP_394099.1| - 0.22 12.4 11.3 0.29 12.0 2.5 2.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain POR_N PF01855.19 gi|16082541|ref|NP_394100.1| - 8.9e-67 225.2 0.2 1.1e-66 224.9 0.2 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|16082541|ref|NP_394100.1| - 3.9e-33 113.8 0.0 7.8e-33 112.8 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|16082541|ref|NP_394100.1| - 0.00048 20.0 0.0 0.001 19.0 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain ZnuA PF01297.17 gi|16082541|ref|NP_394100.1| - 0.00098 18.6 0.4 0.045 13.2 0.2 2.2 2 0 0 2 2 2 2 Zinc-uptake complex component A periplasmic TPP_enzyme_C PF02775.21 gi|16081720|ref|NP_394101.1| - 7.3e-21 74.6 1.3 1.1e-20 73.9 0.2 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|16081720|ref|NP_394101.1| - 0.23 10.7 0.6 1 8.5 0.2 1.9 1 1 1 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase Methyltransf_11 PF08241.12 gi|16082542|ref|NP_394102.1| - 2.1e-24 86.0 0.0 3.7e-24 85.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16082542|ref|NP_394102.1| - 4.7e-22 78.5 0.0 9.1e-22 77.6 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16082542|ref|NP_394102.1| - 1.2e-15 57.6 0.0 1.5e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|16082542|ref|NP_394102.1| - 2.1e-15 56.7 0.0 2.7e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|16082542|ref|NP_394102.1| - 3.3e-14 53.4 0.0 5.8e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16082542|ref|NP_394102.1| - 1.3e-10 41.4 0.0 1.5e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|16082542|ref|NP_394102.1| - 9.7e-06 24.8 0.0 1.3e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|16082542|ref|NP_394102.1| - 3.5e-05 23.4 0.0 4.9e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|16082542|ref|NP_394102.1| - 4.9e-05 22.7 0.0 6.3e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|16082542|ref|NP_394102.1| - 0.00049 20.1 0.0 0.00072 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|16082542|ref|NP_394102.1| - 0.0013 18.9 0.0 0.0018 18.4 0.0 1.3 1 1 0 1 1 1 1 FtsJ-like methyltransferase Met_10 PF02475.16 gi|16082542|ref|NP_394102.1| - 0.0027 17.5 0.0 0.0032 17.3 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein GidB PF02527.15 gi|16082542|ref|NP_394102.1| - 0.0029 17.0 0.0 0.0036 16.7 0.0 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_8 PF05148.15 gi|16082542|ref|NP_394102.1| - 0.0043 16.9 0.0 0.014 15.3 0.0 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_2 PF00891.18 gi|16082542|ref|NP_394102.1| - 0.011 15.1 0.1 0.017 14.4 0.1 1.5 1 1 0 1 1 1 0 O-methyltransferase domain NodS PF05401.11 gi|16082542|ref|NP_394102.1| - 0.021 14.5 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Fibrillarin PF01269.17 gi|16082542|ref|NP_394102.1| - 0.025 13.7 0.0 0.033 13.3 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Methyltransf_16 PF10294.9 gi|16082542|ref|NP_394102.1| - 0.033 13.9 0.0 0.041 13.6 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_29 PF03141.16 gi|16082542|ref|NP_394102.1| - 0.038 12.6 0.0 0.047 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_24 PF13578.6 gi|16082542|ref|NP_394102.1| - 0.063 14.3 0.0 0.098 13.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|16082542|ref|NP_394102.1| - 0.075 12.4 0.0 0.098 12.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|16082542|ref|NP_394102.1| - 0.11 12.1 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MetW PF07021.12 gi|16082542|ref|NP_394102.1| - 0.12 12.0 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|16082542|ref|NP_394102.1| - 0.13 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.14 gi|16082542|ref|NP_394102.1| - 0.18 11.2 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB CheR PF01739.18 gi|16082542|ref|NP_394102.1| - 0.19 11.2 0.1 2.9 7.3 0.0 2.1 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain DREV PF05219.12 gi|16082542|ref|NP_394102.1| - 0.2 10.7 0.0 0.25 10.4 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase Radical_SAM PF04055.21 gi|16082543|ref|NP_394103.1| - 1.3e-09 38.6 0.0 2e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|16082543|ref|NP_394103.1| - 8.4e-06 26.2 0.0 2.1e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Caudo_bapla_RBP PF08931.10 gi|16082543|ref|NP_394103.1| - 0.0057 16.2 0.0 0.0098 15.4 0.0 1.3 1 0 0 1 1 1 1 Receptor-binding protein of phage tail base-plate Siphoviridae, head COXG PF06240.13 gi|16081721|ref|NP_394104.1| - 6.3e-45 152.4 0.0 7e-45 152.2 0.0 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) DAO PF01266.24 gi|16081722|ref|NP_394105.1| - 3.1e-48 165.2 0.0 3.7e-48 164.9 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|16081722|ref|NP_394105.1| - 2.7e-07 30.7 1.4 7.4e-07 29.3 0.5 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|16081722|ref|NP_394105.1| - 4.9e-07 29.3 0.2 2.5e-06 26.9 0.2 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|16081722|ref|NP_394105.1| - 1.3e-06 27.8 0.2 1.4e-05 24.4 0.2 2.1 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|16081722|ref|NP_394105.1| - 6.5e-05 22.2 0.7 0.044 12.9 0.1 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|16081722|ref|NP_394105.1| - 0.00043 20.8 0.7 0.0048 17.4 0.1 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|16081722|ref|NP_394105.1| - 0.00095 18.0 0.3 0.0061 15.3 0.1 2.0 2 0 0 2 2 2 1 HI0933-like protein Amino_oxidase PF01593.24 gi|16081722|ref|NP_394105.1| - 0.001 18.5 0.0 0.21 10.8 0.0 2.8 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase ApbA PF02558.16 gi|16081722|ref|NP_394105.1| - 0.0012 18.5 0.1 0.0021 17.7 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA GMC_oxred_N PF00732.19 gi|16081722|ref|NP_394105.1| - 0.008 15.6 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase Thi4 PF01946.17 gi|16081722|ref|NP_394105.1| - 0.013 14.8 0.1 0.024 13.9 0.1 1.5 1 0 0 1 1 1 0 Thi4 family 3HCDH_N PF02737.18 gi|16081722|ref|NP_394105.1| - 0.016 15.1 0.1 0.044 13.7 0.1 1.8 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|16081722|ref|NP_394105.1| - 0.07 12.4 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain GDPD PF03009.17 gi|16081723|ref|NP_394106.1| - 7.8e-32 111.0 0.0 1.9e-31 109.7 0.0 1.6 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family T3SS_needle_F PF09392.10 gi|16081723|ref|NP_394106.1| - 0.049 13.8 0.1 0.11 12.7 0.1 1.6 1 0 0 1 1 1 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF PI-PLC-X PF00388.19 gi|16081723|ref|NP_394106.1| - 0.14 11.8 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain ELFV_dehydrog PF00208.21 gi|16081724|ref|NP_394107.1| - 2.5e-72 243.5 0.2 3.5e-72 243.0 0.2 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|16081724|ref|NP_394107.1| - 1.2e-56 190.1 0.0 2.1e-56 189.3 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|16081724|ref|NP_394107.1| - 0.00069 19.0 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Gp_dh_N PF00044.24 gi|16081724|ref|NP_394107.1| - 0.035 14.4 0.0 0.091 13.1 0.0 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Cdc6_C PF09079.11 gi|16081725|ref|NP_394108.1| - 1.3e-17 63.6 0.2 3.9e-17 62.0 0.0 2.0 2 0 0 2 2 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|16081725|ref|NP_394108.1| - 2e-11 44.3 0.0 4.6e-11 43.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|16081725|ref|NP_394108.1| - 1.1e-10 42.0 1.0 5e-10 39.9 1.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|16081725|ref|NP_394108.1| - 6.5e-10 39.7 0.0 2.4e-07 31.3 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain TniB PF05621.11 gi|16081725|ref|NP_394108.1| - 5.7e-07 29.1 0.0 3.5e-06 26.6 0.0 1.9 2 0 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|16081725|ref|NP_394108.1| - 5.4e-06 26.5 0.6 9.5e-05 22.4 0.6 2.2 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Bac_DnaA PF00308.18 gi|16081725|ref|NP_394108.1| - 0.00056 19.8 0.4 0.047 13.5 0.0 2.3 2 0 0 2 2 2 1 Bacterial dnaA protein DUF815 PF05673.13 gi|16081725|ref|NP_394108.1| - 0.0008 18.6 0.0 0.0019 17.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Sigma54_activat PF00158.26 gi|16081725|ref|NP_394108.1| - 0.0043 16.8 0.0 0.012 15.4 0.0 1.7 1 0 0 1 1 1 1 Sigma-54 interaction domain T2SSE PF00437.20 gi|16081725|ref|NP_394108.1| - 0.0053 15.9 0.0 0.012 14.7 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_18 PF13238.6 gi|16081725|ref|NP_394108.1| - 0.0081 16.7 0.1 0.023 15.2 0.0 1.9 2 0 0 2 2 1 1 AAA domain IstB_IS21 PF01695.17 gi|16081725|ref|NP_394108.1| - 0.01 15.6 0.1 0.2 11.4 0.0 2.7 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_7 PF12775.7 gi|16081725|ref|NP_394108.1| - 0.011 15.3 0.2 0.04 13.4 0.1 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region DEAD PF00270.29 gi|16081725|ref|NP_394108.1| - 0.013 15.3 0.5 7.7 6.2 0.1 3.0 3 0 0 3 3 3 0 DEAD/DEAH box helicase Microtub_bd PF16796.5 gi|16081725|ref|NP_394108.1| - 0.015 15.3 0.0 0.037 14.0 0.0 1.7 1 0 0 1 1 1 0 Microtubule binding AAA_5 PF07728.14 gi|16081725|ref|NP_394108.1| - 0.015 15.3 0.1 0.066 13.2 0.1 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Fer4_NifH PF00142.18 gi|16081725|ref|NP_394108.1| - 0.021 14.3 0.2 0.06 12.8 0.1 1.8 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_2 PF07724.14 gi|16081725|ref|NP_394108.1| - 0.022 14.9 0.0 0.05 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 gi|16081725|ref|NP_394108.1| - 0.024 15.0 0.1 0.1 13.0 0.0 2.1 2 0 0 2 2 1 0 RNA helicase KAP_NTPase PF07693.14 gi|16081725|ref|NP_394108.1| - 0.025 13.8 0.5 0.36 10.0 0.5 2.1 1 1 0 1 1 1 0 KAP family P-loop domain AAA_19 PF13245.6 gi|16081725|ref|NP_394108.1| - 0.04 14.3 0.0 0.1 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|16081725|ref|NP_394108.1| - 0.044 13.0 0.0 0.072 12.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Kinesin PF00225.23 gi|16081725|ref|NP_394108.1| - 0.044 12.7 0.0 0.074 12.0 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain ResIII PF04851.15 gi|16081725|ref|NP_394108.1| - 0.057 13.4 0.1 0.5 10.4 0.1 2.1 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 gi|16081725|ref|NP_394108.1| - 0.064 13.0 0.8 0.14 11.9 0.8 1.7 1 1 0 1 1 1 0 AAA domain PIF1 PF05970.14 gi|16081725|ref|NP_394108.1| - 0.09 11.9 0.1 0.17 11.1 0.1 1.4 1 0 0 1 1 1 0 PIF1-like helicase Zeta_toxin PF06414.12 gi|16081725|ref|NP_394108.1| - 0.1 11.9 0.0 0.19 11.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin TsaE PF02367.17 gi|16081725|ref|NP_394108.1| - 0.1 12.6 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE FtsK_SpoIIIE PF01580.18 gi|16081725|ref|NP_394108.1| - 0.14 11.5 0.3 0.86 8.9 0.1 2.0 2 0 0 2 2 2 0 FtsK/SpoIIIE family Mur_ligase_M PF08245.12 gi|16081726|ref|NP_394109.1| - 2.4e-14 53.8 0.0 4e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 gi|16081726|ref|NP_394109.1| - 4e-09 36.6 0.0 1.7e-08 34.6 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain tRNA-synt_2d PF01409.20 gi|16081727|ref|NP_394110.1| - 1.7e-81 273.4 0.0 2.2e-81 273.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|16081727|ref|NP_394110.1| - 3.6e-09 36.4 0.0 5.2e-08 32.6 0.0 2.2 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|16081727|ref|NP_394110.1| - 0.00036 19.7 0.0 0.091 11.8 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) DUF2582 PF10771.9 gi|16081727|ref|NP_394110.1| - 0.049 13.8 0.0 3.7 7.8 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix domain (DUF2582) FixQ PF05545.11 gi|16081728|ref|NP_394111.1| - 0.007 16.3 0.3 0.007 16.3 0.3 4.4 5 0 0 5 5 5 1 Cbb3-type cytochrome oxidase component FixQ DUF2368 PF10166.9 gi|16081728|ref|NP_394111.1| - 0.12 12.0 0.1 0.31 10.6 0.1 1.7 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) Holin_SPP1 PF04688.13 gi|16081728|ref|NP_394111.1| - 4 7.7 5.9 9.3 6.5 0.2 3.5 3 0 0 3 3 3 0 SPP1 phage holin ABC_tran PF00005.27 gi|16082544|ref|NP_394112.1| - 1.8e-27 96.5 0.0 4.9e-27 95.1 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|16082544|ref|NP_394112.1| - 5e-12 46.2 0.4 2.7e-06 27.4 0.0 2.5 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|16082544|ref|NP_394112.1| - 7.8e-06 25.8 0.0 0.028 14.2 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|16082544|ref|NP_394112.1| - 2.6e-05 23.8 0.6 0.018 14.5 0.0 2.6 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|16082544|ref|NP_394112.1| - 0.00048 19.8 0.0 0.00087 19.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain HTH_46 PF15977.5 gi|16082544|ref|NP_394112.1| - 0.0012 18.9 0.2 0.019 15.0 0.0 2.8 3 0 0 3 3 3 1 Winged helix-turn-helix DNA binding AAA_33 PF13671.6 gi|16082544|ref|NP_394112.1| - 0.0013 18.9 0.0 0.0023 18.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|16082544|ref|NP_394112.1| - 0.0014 19.2 0.7 0.0045 17.5 0.0 2.1 2 1 1 3 3 3 1 AAA domain AAA_18 PF13238.6 gi|16082544|ref|NP_394112.1| - 0.021 15.4 0.0 2.2 8.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|16082544|ref|NP_394112.1| - 0.025 14.2 0.0 0.043 13.4 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TsaE PF02367.17 gi|16082544|ref|NP_394112.1| - 0.027 14.5 0.0 0.048 13.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 gi|16082544|ref|NP_394112.1| - 0.035 14.5 2.5 0.12 12.8 0.6 2.6 2 2 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 gi|16082544|ref|NP_394112.1| - 0.046 13.8 0.0 9.8 6.3 0.0 2.4 2 0 0 2 2 2 0 Shikimate kinase Rad17 PF03215.15 gi|16082544|ref|NP_394112.1| - 0.051 13.5 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain Cdc6_C PF09079.11 gi|16082544|ref|NP_394112.1| - 0.076 13.0 0.0 0.44 10.6 0.0 2.2 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|16082544|ref|NP_394112.1| - 0.082 13.2 0.2 0.23 11.8 0.2 2.0 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|16082544|ref|NP_394112.1| - 0.098 12.2 0.0 0.17 11.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|16082544|ref|NP_394112.1| - 0.098 12.9 0.1 1.8 8.8 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|16082544|ref|NP_394112.1| - 0.1 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|16082544|ref|NP_394112.1| - 0.11 11.1 0.0 0.19 10.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16082544|ref|NP_394112.1| - 0.12 12.8 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|16082544|ref|NP_394112.1| - 0.13 12.2 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain DUF3584 PF12128.8 gi|16082544|ref|NP_394112.1| - 0.17 9.4 0.0 0.23 8.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC2_membrane PF01061.24 gi|16081729|ref|NP_394113.1| - 8.4e-11 41.7 22.9 8.4e-11 41.7 22.9 1.8 2 0 0 2 2 2 1 ABC-2 type transporter Rhodanese PF00581.20 gi|16081730|ref|NP_394114.1| - 8.4e-13 48.8 0.0 3.7e-10 40.3 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain MethyltransfD12 PF02086.15 gi|16082545|ref|NP_394115.1| - 1.7e-61 208.2 5.6 1.9e-61 208.0 5.6 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase AA_permease PF00324.21 gi|16081731|ref|NP_394116.1| - 2.7e-21 75.7 54.8 4e-21 75.2 54.8 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16081731|ref|NP_394116.1| - 7.3e-16 58.0 58.7 4.1e-15 55.6 58.8 1.8 1 1 0 1 1 1 1 Amino acid permease DUF4774 PF15999.5 gi|16081731|ref|NP_394116.1| - 2 8.3 7.4 15 5.5 5.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4774) Acyl-CoA_dh_1 PF00441.24 gi|16081732|ref|NP_394117.1| - 2.6e-33 115.3 0.1 7.7e-33 113.8 0.0 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16081732|ref|NP_394117.1| - 1e-18 67.3 0.0 2e-18 66.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|16081732|ref|NP_394117.1| - 1.2e-10 41.8 0.0 3e-10 40.5 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain AidB_N PF18158.1 gi|16081732|ref|NP_394117.1| - 0.016 15.1 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain ThiS PF02597.20 gi|16081733|ref|NP_394118.1| - 0.00013 22.5 0.0 0.00015 22.3 0.0 1.0 1 0 0 1 1 1 1 ThiS family SGL PF08450.12 gi|16081734|ref|NP_394119.1| - 2.8e-71 240.0 0.1 3.3e-71 239.7 0.1 1.1 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region DUF839 PF05787.13 gi|16081734|ref|NP_394119.1| - 0.012 14.8 0.2 0.45 9.6 0.1 2.1 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF839) Str_synth PF03088.16 gi|16081734|ref|NP_394119.1| - 0.016 15.3 0.0 0.035 14.2 0.0 1.6 1 0 0 1 1 1 0 Strictosidine synthase SdiA-regulated PF06977.11 gi|16081734|ref|NP_394119.1| - 0.15 11.2 0.1 1 8.5 0.0 2.3 2 2 1 3 3 3 0 SdiA-regulated Reg_prop PF07494.11 gi|16081734|ref|NP_394119.1| - 0.19 12.1 0.6 1.1 9.8 0.4 2.5 2 0 0 2 2 2 0 Two component regulator propeller Lyase_1 PF00206.20 gi|16081735|ref|NP_394120.1| - 5.5e-23 81.8 0.0 7.9e-23 81.3 0.0 1.1 1 0 0 1 1 1 1 Lyase Arginosuc_synth PF00764.19 gi|16081736|ref|NP_394121.1| - 1.9e-127 425.8 0.0 2.3e-127 425.5 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|16081736|ref|NP_394121.1| - 0.0092 15.5 0.1 0.029 13.9 0.1 1.8 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ACT_7 PF13840.6 gi|16081737|ref|NP_394122.1| - 0.00016 21.4 1.9 0.00049 19.8 0.3 2.2 2 0 0 2 2 2 1 ACT domain Mnd1 PF03962.15 gi|16081737|ref|NP_394122.1| - 0.0057 16.9 0.0 0.013 15.8 0.0 1.6 1 0 0 1 1 1 1 Mnd1 HTH domain TPK_B1_binding PF04265.14 gi|16081737|ref|NP_394122.1| - 0.11 12.3 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Sirohm_synth_M PF14824.6 gi|16081738|ref|NP_394123.1| - 5e-05 22.7 0.0 5e-05 22.7 0.0 2.8 3 0 0 3 3 3 1 Sirohaem biosynthesis protein central NAD_binding_7 PF13241.6 gi|16081738|ref|NP_394123.1| - 0.01 16.3 0.0 0.033 14.6 0.0 1.7 2 0 0 2 2 2 0 Putative NAD(P)-binding DUF3562 PF12085.8 gi|16081738|ref|NP_394123.1| - 0.013 15.1 0.0 0.34 10.6 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) TP_methylase PF00590.20 gi|16081739|ref|NP_394124.1| - 1.7e-35 122.9 0.1 2.3e-35 122.5 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiC PF02570.15 gi|16081740|ref|NP_394125.1| - 6.6e-60 202.1 0.1 8e-60 201.9 0.1 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase TP_methylase PF00590.20 gi|16081741|ref|NP_394126.1| - 1.9e-40 139.1 0.0 2.2e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases GAF PF01590.26 gi|16081741|ref|NP_394126.1| - 0.1 13.2 0.0 0.16 12.6 0.0 1.3 1 0 0 1 1 1 0 GAF domain CbiD PF01888.17 gi|16081742|ref|NP_394127.1| - 1.7e-68 230.7 0.4 2.1e-68 230.4 0.4 1.1 1 0 0 1 1 1 1 CbiD DUF5598 PF18127.1 gi|16081742|ref|NP_394127.1| - 0.045 14.2 0.0 0.081 13.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5598) fragilysinNterm PF16376.5 gi|16081742|ref|NP_394127.1| - 0.074 12.8 0.0 6.1 6.6 0.0 2.2 2 0 0 2 2 2 0 N-terminal domain of fragilysin Methyltransf_25 PF13649.6 gi|16081743|ref|NP_394128.1| - 1.1e-10 42.1 0.1 2.3e-10 41.1 0.1 1.5 2 0 0 2 2 1 1 Methyltransferase domain PCMT PF01135.19 gi|16081743|ref|NP_394128.1| - 3.3e-10 40.1 0.0 6.5e-10 39.1 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|16081743|ref|NP_394128.1| - 5.4e-10 39.3 0.0 7e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|16081743|ref|NP_394128.1| - 1.3e-07 31.2 0.0 1.5e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|16081743|ref|NP_394128.1| - 5.5e-07 29.3 0.0 2.9e-06 26.9 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|16081743|ref|NP_394128.1| - 6.6e-07 29.9 0.1 1.1e-06 29.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|16081743|ref|NP_394128.1| - 1.1e-06 28.1 0.1 1.4e-06 27.8 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|16081743|ref|NP_394128.1| - 5.3e-06 27.1 0.0 7.9e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|16081743|ref|NP_394128.1| - 1.8e-05 24.5 0.0 2.3e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) GCD14 PF08704.10 gi|16081743|ref|NP_394128.1| - 2.5e-05 24.1 0.1 3.2e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_23 PF13489.6 gi|16081743|ref|NP_394128.1| - 0.00017 21.5 0.0 0.0002 21.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|16081743|ref|NP_394128.1| - 0.00017 21.1 0.1 0.00022 20.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Fibrillarin PF01269.17 gi|16081743|ref|NP_394128.1| - 0.00046 19.4 0.0 0.00067 18.8 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltr_RsmB-F PF01189.17 gi|16081743|ref|NP_394128.1| - 0.0011 18.7 0.0 0.0021 17.7 0.0 1.4 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 gi|16081743|ref|NP_394128.1| - 0.0018 18.2 0.0 0.0026 17.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|16081743|ref|NP_394128.1| - 0.026 13.6 0.0 0.032 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.17 gi|16081743|ref|NP_394128.1| - 0.027 13.9 0.0 0.052 13.0 0.0 1.4 1 1 0 1 1 1 0 Putative methyltransferase N6_Mtase PF02384.16 gi|16081743|ref|NP_394128.1| - 0.027 13.7 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase MetW PF07021.12 gi|16081743|ref|NP_394128.1| - 0.044 13.4 0.1 0.088 12.4 0.1 1.6 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW FtsJ PF01728.19 gi|16081743|ref|NP_394128.1| - 0.089 12.9 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_32 PF13679.6 gi|16081743|ref|NP_394128.1| - 0.09 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain TP_methylase PF00590.20 gi|16081744|ref|NP_394129.1| - 4.8e-37 128.0 0.0 5.4e-37 127.8 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 gi|16081745|ref|NP_394130.1| - 3.2e-49 167.8 0.0 3.8e-49 167.5 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|16081745|ref|NP_394130.1| - 0.0026 18.1 0.0 0.0056 17.1 0.0 1.7 1 1 0 1 1 1 1 Radical SAM superfamily TP_methylase PF00590.20 gi|16081746|ref|NP_394131.1| - 9.4e-34 117.2 0.0 2.1e-31 109.5 0.0 2.4 2 0 0 2 2 2 2 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_N PF11760.8 gi|16081746|ref|NP_394131.1| - 5.9e-19 67.8 0.5 2.6e-18 65.8 0.3 2.2 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 gi|16081746|ref|NP_394131.1| - 5.8e-11 43.0 0.0 1.2e-10 42.0 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.8 gi|16081746|ref|NP_394131.1| - 0.19 11.8 0.0 0.42 10.8 0.0 1.6 1 0 0 1 1 1 0 Cobalamin biosynthesis central region AA_permease PF00324.21 gi|16081747|ref|NP_394132.1| - 9.1e-83 278.5 52.0 1.1e-82 278.2 52.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16081747|ref|NP_394132.1| - 2.9e-20 72.5 55.7 4.9e-20 71.8 55.8 1.3 1 1 0 1 1 1 1 Amino acid permease Amidohydro_3 PF07969.11 gi|16082546|ref|NP_394133.1| - 3.6e-53 181.7 0.3 4.2e-53 181.5 0.3 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|16082546|ref|NP_394133.1| - 4.4e-11 42.7 0.0 1e-06 28.4 0.0 2.7 3 0 0 3 3 3 2 Amidohydrolase family Peptidase_S9 PF00326.21 gi|16081749|ref|NP_394135.1| - 7e-43 146.6 0.0 1e-42 146.1 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|16081749|ref|NP_394135.1| - 6.7e-09 35.8 0.3 0.001 18.8 0.5 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 gi|16081749|ref|NP_394135.1| - 5.5e-08 32.6 0.0 1.1e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|16081749|ref|NP_394135.1| - 2.3e-05 24.1 0.0 0.015 14.9 0.1 2.1 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 gi|16081749|ref|NP_394135.1| - 5.7e-05 23.8 0.1 0.00074 20.2 0.0 1.9 1 1 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|16081749|ref|NP_394135.1| - 0.00018 20.9 0.0 0.2 10.9 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DUF2920 PF11144.8 gi|16081749|ref|NP_394135.1| - 0.00019 20.7 0.0 0.13 11.4 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2920) Abhydrolase_2 PF02230.16 gi|16081749|ref|NP_394135.1| - 0.00051 19.9 0.3 0.0064 16.3 0.0 2.2 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Peptidase_S28 PF05577.12 gi|16081749|ref|NP_394135.1| - 0.1 11.4 0.1 0.16 10.7 0.1 1.2 1 0 0 1 1 1 0 Serine carboxypeptidase S28 CcmE PF03100.15 gi|16081750|ref|NP_394136.1| - 0.21 11.6 1.8 1.5 8.9 1.8 2.0 1 1 0 1 1 1 0 CcmE DUF488 PF04343.13 gi|16081751|ref|NP_394137.1| - 6.9e-25 88.0 0.7 8e-25 87.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 DUF3135 PF11333.8 gi|16081751|ref|NP_394137.1| - 0.022 15.0 0.1 0.032 14.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) AMP-binding PF00501.28 gi|16081752|ref|NP_394138.1| - 5.2e-54 183.4 0.0 6.6e-54 183.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|16081752|ref|NP_394138.1| - 2.4e-08 34.8 0.0 4.3e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Lactamase_B PF00753.27 gi|16081753|ref|NP_394139.1| - 6.9e-29 101.3 1.4 1.9e-28 99.8 1.4 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|16081753|ref|NP_394139.1| - 5e-07 29.4 0.2 8.5e-07 28.7 0.2 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|16081753|ref|NP_394139.1| - 5.8e-07 29.1 0.2 2.9e-06 26.9 0.2 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily domain PALP PF00291.25 gi|16081754|ref|NP_394140.1| - 8e-38 130.5 0.0 9.9e-38 130.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Amidase_5 PF05382.13 gi|16081754|ref|NP_394140.1| - 0.1 12.5 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase Radical_SAM PF04055.21 gi|16081755|ref|NP_394141.1| - 3.4e-21 76.4 0.0 6.8e-21 75.4 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|16081755|ref|NP_394141.1| - 9.7e-08 32.2 1.5 5.7e-07 29.7 0.0 2.8 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|16081755|ref|NP_394141.1| - 1e-05 25.8 0.1 3.8e-05 24.0 0.1 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain DUF2059 PF09832.9 gi|16081755|ref|NP_394141.1| - 0.0071 16.4 0.1 0.017 15.2 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2059) AA_permease_2 PF13520.6 gi|16081756|ref|NP_394142.1| - 1.2e-20 73.8 57.9 3.2e-20 72.4 57.9 1.6 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16081756|ref|NP_394142.1| - 4.7e-15 55.1 56.9 6.2e-15 54.7 56.9 1.0 1 0 0 1 1 1 1 Amino acid permease adh_short_C2 PF13561.6 gi|16081757|ref|NP_394143.1| - 3.5e-54 183.8 0.0 5e-54 183.3 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081757|ref|NP_394143.1| - 2.1e-43 148.0 0.0 2.8e-43 147.7 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081757|ref|NP_394143.1| - 1.7e-05 24.8 0.0 0.17 11.8 0.0 2.2 2 0 0 2 2 2 2 KR domain DUF1776 PF08643.10 gi|16081757|ref|NP_394143.1| - 0.051 12.9 0.0 0.066 12.6 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 gi|16081757|ref|NP_394143.1| - 0.08 12.4 0.1 0.12 11.9 0.1 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family SelA PF03841.13 gi|16081758|ref|NP_394144.1| - 1.3e-05 24.3 0.5 4.2e-05 22.7 0.5 1.8 2 1 0 2 2 2 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 gi|16081758|ref|NP_394144.1| - 0.00012 20.8 0.0 0.00018 20.2 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|16081758|ref|NP_394144.1| - 0.00091 18.3 0.0 0.0013 17.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V SepSecS PF05889.13 gi|16081758|ref|NP_394144.1| - 0.035 12.8 0.0 0.068 11.8 0.0 1.5 2 0 0 2 2 2 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aldose_epim PF01263.20 gi|16081759|ref|NP_394145.1| - 2.3e-22 79.7 0.0 4.1e-22 78.9 0.0 1.3 1 1 0 1 1 1 1 Aldose 1-epimerase HTH_10 PF04967.12 gi|16081760|ref|NP_394146.1| - 1.6e-21 75.8 0.0 3.1e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|16081760|ref|NP_394146.1| - 0.01 15.5 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.12 gi|16081760|ref|NP_394146.1| - 0.049 13.6 0.0 0.47 10.4 0.0 2.3 2 0 0 2 2 2 0 HTH domain GerE PF00196.19 gi|16081760|ref|NP_394146.1| - 0.056 13.0 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 gi|16081760|ref|NP_394146.1| - 0.077 12.5 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 LacI PF00356.21 gi|16081760|ref|NP_394146.1| - 0.1 12.4 0.1 0.36 10.6 0.0 2.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family DUF134 PF02001.16 gi|16081760|ref|NP_394146.1| - 0.11 13.1 0.0 0.22 12.1 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function DUF134 Penicil_amidase PF01804.18 gi|16081761|ref|NP_394147.1| - 5.5e-152 508.1 1.0 6.6e-152 507.9 1.0 1.0 1 0 0 1 1 1 1 Penicillin amidase HTH_5 PF01022.20 gi|16081763|ref|NP_394149.1| - 7.2e-06 25.8 0.1 2e-05 24.4 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|16081763|ref|NP_394149.1| - 0.00016 21.5 0.0 0.00029 20.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HxlR PF01638.17 gi|16081763|ref|NP_394149.1| - 0.00017 21.4 0.7 0.00028 20.7 0.7 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 gi|16081763|ref|NP_394149.1| - 0.00023 21.0 0.1 0.00053 19.9 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|16081763|ref|NP_394149.1| - 0.00055 19.4 0.0 0.001 18.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|16081763|ref|NP_394149.1| - 0.001 18.9 0.1 0.018 14.9 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Replic_Relax PF13814.6 gi|16081763|ref|NP_394149.1| - 0.0057 16.7 0.0 0.057 13.5 0.0 2.0 2 0 0 2 2 2 1 Replication-relaxation HTH_Crp_2 PF13545.6 gi|16081763|ref|NP_394149.1| - 0.0071 16.3 0.3 0.15 12.1 0.1 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|16081763|ref|NP_394149.1| - 0.0072 16.4 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|16081763|ref|NP_394149.1| - 0.0074 16.1 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|16081763|ref|NP_394149.1| - 0.011 16.2 0.0 0.03 14.8 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|16081763|ref|NP_394149.1| - 0.014 15.3 0.2 0.03 14.3 0.2 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_11 PF08279.12 gi|16081763|ref|NP_394149.1| - 0.023 14.7 2.7 0.12 12.3 0.2 2.4 1 1 1 2 2 2 0 HTH domain HTH_34 PF13601.6 gi|16081763|ref|NP_394149.1| - 0.026 14.7 0.1 0.049 13.8 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_41 PF14502.6 gi|16081763|ref|NP_394149.1| - 0.047 13.4 0.1 0.12 12.0 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|16081763|ref|NP_394149.1| - 0.048 13.5 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Sulf_transp PF04143.14 gi|16081764|ref|NP_394150.1| - 3.2e-27 95.9 17.4 3.2e-27 95.9 17.4 1.7 2 1 0 2 2 2 1 Sulphur transport TRIQK PF15168.6 gi|16081764|ref|NP_394150.1| - 0.35 10.8 2.0 0.5 10.3 0.2 2.2 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family Orf78 PF06024.12 gi|16081764|ref|NP_394150.1| - 5.5 7.4 4.7 17 5.8 0.0 2.7 3 0 0 3 3 3 0 Orf78 (ac78) Archease PF01951.16 gi|16081765|ref|NP_394151.1| - 7.5e-27 94.3 0.1 8.4e-27 94.1 0.1 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Sacchrp_dh_C PF16653.5 gi|16081766|ref|NP_394152.1| - 2.8e-32 112.9 0.0 4.1e-32 112.3 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|16081766|ref|NP_394152.1| - 1.9e-15 57.3 0.0 3.3e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|16081766|ref|NP_394152.1| - 4.1e-06 26.8 0.0 8.9e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|16081766|ref|NP_394152.1| - 5.5e-06 26.9 0.0 1.2e-05 25.8 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|16081766|ref|NP_394152.1| - 3.1e-05 24.2 0.0 6.9e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 gi|16081766|ref|NP_394152.1| - 3.2e-05 24.2 0.0 9.7e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 TrkA-N domain Semialdhyde_dh PF01118.24 gi|16081766|ref|NP_394152.1| - 0.00043 20.7 0.0 0.00091 19.7 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain ApbA PF02558.16 gi|16081766|ref|NP_394152.1| - 0.0007 19.3 0.0 0.0014 18.3 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Rossmann-like PF10727.9 gi|16081766|ref|NP_394152.1| - 0.00099 19.0 0.0 0.0017 18.2 0.0 1.3 1 0 0 1 1 1 1 Rossmann-like domain Pyr_redox PF00070.27 gi|16081766|ref|NP_394152.1| - 0.0047 17.4 1.1 0.087 13.4 0.0 3.1 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase Epimerase PF01370.21 gi|16081766|ref|NP_394152.1| - 0.0049 16.4 0.0 0.0077 15.7 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|16081766|ref|NP_394152.1| - 0.007 16.3 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|16081766|ref|NP_394152.1| - 0.0096 15.4 0.0 0.042 13.3 0.0 1.9 1 1 0 2 2 2 1 short chain dehydrogenase Shikimate_DH PF01488.20 gi|16081766|ref|NP_394152.1| - 0.011 15.7 0.0 0.022 14.8 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|16081766|ref|NP_394152.1| - 0.017 15.1 0.0 0.036 14.1 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|16081766|ref|NP_394152.1| - 0.021 14.4 0.0 0.05 13.2 0.0 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Apc15p PF05841.11 gi|16081766|ref|NP_394152.1| - 0.12 13.2 0.0 0.31 11.9 0.0 1.6 1 0 0 1 1 1 0 Apc15p protein DUF3852 PF12963.7 gi|16081767|ref|NP_394153.1| - 0.034 14.5 6.5 2 8.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3852) DUF2070 PF09843.9 gi|16081767|ref|NP_394153.1| - 2.3 6.4 29.6 4.9 5.3 29.6 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3290 PF11694.8 gi|16081767|ref|NP_394153.1| - 3.4 7.6 9.6 13 5.8 1.4 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) MFS_1 PF07690.16 gi|16081768|ref|NP_394154.1| - 1.1e-49 169.3 36.8 1.1e-49 169.3 36.8 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily ASFV_L11L PF05293.11 gi|16081768|ref|NP_394154.1| - 0.16 12.3 2.0 0.28 11.5 0.2 2.4 2 0 0 2 2 2 0 African swine fever virus (ASFV) L11L protein OATP PF03137.20 gi|16081768|ref|NP_394154.1| - 0.67 8.2 10.6 2 6.6 5.8 3.1 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family DeoC PF01791.9 gi|16081769|ref|NP_394155.1| - 1.7e-07 31.1 0.0 3.9e-07 29.9 0.0 1.6 1 1 0 1 1 1 1 DeoC/LacD family aldolase Shufflon_N PF04917.12 gi|16081769|ref|NP_394155.1| - 0.085 12.3 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial shufflon protein, N-terminal constant region EMP24_GP25L PF01105.24 gi|16081769|ref|NP_394155.1| - 0.14 12.1 0.0 0.23 11.4 0.0 1.3 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Glyco_hydro_3_C PF01915.22 gi|16081769|ref|NP_394155.1| - 0.16 11.9 0.0 0.23 11.4 0.0 1.3 1 1 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain Regulator_TrmB PF11495.8 gi|16081770|ref|NP_394156.1| - 1e-60 204.9 3.3 1.6e-60 204.2 3.3 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|16081770|ref|NP_394156.1| - 6.4e-19 67.6 0.1 1.2e-18 66.8 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|16081770|ref|NP_394156.1| - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 MarR family TFIID-31kDa PF02291.15 gi|16081770|ref|NP_394156.1| - 0.15 12.2 0.1 0.85 9.7 0.0 2.1 3 0 0 3 3 3 0 Transcription initiation factor IID, 31kD subunit GDE_C PF06202.14 gi|16081771|ref|NP_394157.1| - 1.2e-07 31.0 0.1 0.00018 20.6 0.0 3.2 3 1 1 4 4 4 2 Amylo-alpha-1,6-glucosidase GDE_C PF06202.14 gi|16081772|ref|NP_394158.1| - 1.5e-10 40.6 0.1 2.4e-06 26.8 0.0 3.2 3 0 0 3 3 3 3 Amylo-alpha-1,6-glucosidase ABC_tran PF00005.27 gi|16081773|ref|NP_394159.1| - 3.3e-32 111.8 0.0 5.2e-32 111.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081773|ref|NP_394159.1| - 1.1e-07 32.0 0.9 0.01 15.7 0.6 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16081773|ref|NP_394159.1| - 6.3e-06 25.8 0.5 3.3e-05 23.4 0.5 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain OB_MalK PF17912.1 gi|16081773|ref|NP_394159.1| - 0.00014 22.6 0.1 0.00046 21.0 0.1 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_23 PF13476.6 gi|16081773|ref|NP_394159.1| - 0.0016 18.9 0.1 0.0031 18.0 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|16081773|ref|NP_394159.1| - 0.0038 16.9 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|16081773|ref|NP_394159.1| - 0.0049 17.1 0.1 0.032 14.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|16081773|ref|NP_394159.1| - 0.005 17.2 0.0 0.011 16.1 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|16081773|ref|NP_394159.1| - 0.0082 16.3 0.1 0.093 12.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|16081773|ref|NP_394159.1| - 0.0093 15.9 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 NACHT domain T2SSE PF00437.20 gi|16081773|ref|NP_394159.1| - 0.012 14.7 0.0 0.02 14.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein TOBE_2 PF08402.10 gi|16081773|ref|NP_394159.1| - 0.025 14.8 0.0 0.054 13.7 0.0 1.6 1 0 0 1 1 1 0 TOBE domain RsgA_GTPase PF03193.16 gi|16081773|ref|NP_394159.1| - 0.025 14.5 0.0 0.056 13.4 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 gi|16081773|ref|NP_394159.1| - 0.042 14.1 0.1 0.19 12.0 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|16081773|ref|NP_394159.1| - 0.045 13.5 0.0 0.14 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|16081773|ref|NP_394159.1| - 0.059 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|16081773|ref|NP_394159.1| - 0.068 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|16081773|ref|NP_394159.1| - 0.069 12.9 0.1 0.25 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|16081773|ref|NP_394159.1| - 0.075 12.3 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.29 gi|16081773|ref|NP_394159.1| - 0.11 12.9 0.0 0.48 10.9 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF3898 PF13037.6 gi|16081773|ref|NP_394159.1| - 0.11 12.6 0.0 2.6 8.2 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3898) ABC_ATPase PF09818.9 gi|16081773|ref|NP_394159.1| - 0.18 10.6 0.9 2.8 6.6 0.1 2.5 2 1 0 2 2 2 0 Predicted ATPase of the ABC class BPD_transp_1 PF00528.22 gi|16081774|ref|NP_394160.1| - 2.6e-15 56.6 17.7 2.6e-15 56.6 17.7 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|16081775|ref|NP_394161.1| - 4.1e-11 43.0 25.9 4.1e-11 43.0 25.9 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component GWT1 PF06423.12 gi|16081775|ref|NP_394161.1| - 3.7 7.6 11.1 0.035 14.2 2.0 2.2 2 1 0 2 2 2 0 GWT1 TPP_enzyme_N PF02776.18 gi|16081776|ref|NP_394162.1| - 1.8e-52 177.4 0.0 2.7e-52 176.9 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|16081776|ref|NP_394162.1| - 1.3e-35 122.1 0.0 2.4e-35 121.2 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain SBP_bac_8 PF13416.6 gi|16081776|ref|NP_394162.1| - 0.0025 17.7 0.0 0.0055 16.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein MFS_1 PF07690.16 gi|16081777|ref|NP_394163.1| - 2.9e-38 131.7 32.1 2.9e-38 131.7 32.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|16081777|ref|NP_394163.1| - 0.004 16.5 21.8 0.08 12.2 21.8 2.1 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF962 PF06127.11 gi|16081777|ref|NP_394163.1| - 1.3 9.2 14.2 2.2 8.4 0.8 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF962) Halogen_Hydrol PF10112.9 gi|16081777|ref|NP_394163.1| - 2.3 8.2 0.0 2.3 8.2 0.0 3.1 4 0 0 4 4 4 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Epimerase PF01370.21 gi|16081778|ref|NP_394164.1| - 6.2e-30 104.4 0.5 7.5e-27 94.3 0.5 3.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|16081778|ref|NP_394164.1| - 4e-21 75.8 0.2 5.1e-14 52.4 0.0 3.0 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|16081778|ref|NP_394164.1| - 0.00017 20.7 0.1 0.071 12.1 0.0 2.2 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|16081778|ref|NP_394164.1| - 0.0014 17.8 0.0 0.004 16.3 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|16081778|ref|NP_394164.1| - 0.0057 15.8 0.0 0.088 11.9 0.0 2.2 1 1 1 2 2 2 1 RmlD substrate binding domain NmrA PF05368.13 gi|16081778|ref|NP_394164.1| - 0.049 13.2 0.1 1.8 8.0 0.0 2.1 2 0 0 2 2 2 0 NmrA-like family SAC3_GANP PF03399.16 gi|16081778|ref|NP_394164.1| - 0.2 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 SAC3/GANP family Glycos_transf_1 PF00534.20 gi|16081780|ref|NP_394166.1| - 1.9e-15 56.9 0.0 3.4e-15 56.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16081780|ref|NP_394166.1| - 1.1e-13 51.8 0.0 2.1e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|16081780|ref|NP_394166.1| - 0.00036 20.9 0.0 0.0013 19.1 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferases group 1 NMT PF01233.19 gi|16081780|ref|NP_394166.1| - 0.58 10.0 2.4 0.58 10.0 0.3 1.8 2 0 0 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Glycos_transf_1 PF00534.20 gi|16081781|ref|NP_394167.1| - 1.3e-09 37.8 0.0 3.3e-09 36.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16081781|ref|NP_394167.1| - 9.8e-05 22.8 0.0 0.00019 21.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|16081781|ref|NP_394167.1| - 0.0017 18.7 0.0 0.0035 17.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|16081781|ref|NP_394167.1| - 0.035 14.1 0.0 0.061 13.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Transposase_mut PF00872.18 gi|16081782|ref|NP_394168.1| - 2.9e-23 82.4 0.0 3e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family Methyltransf_21 PF05050.12 gi|16082547|ref|NP_394170.1| - 8.2e-19 68.3 0.0 1.3e-18 67.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 gi|16082547|ref|NP_394170.1| - 0.0058 16.4 0.0 0.0073 16.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein V_cholerae_RfbT PF05575.11 gi|16082547|ref|NP_394170.1| - 0.057 12.7 0.0 0.11 11.7 0.0 1.4 2 0 0 2 2 2 0 Vibrio cholerae RfbT protein Methyltransf_18 PF12847.7 gi|16082547|ref|NP_394170.1| - 0.076 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Glycos_transf_1 PF00534.20 gi|16081784|ref|NP_394171.1| - 2.5e-13 49.9 0.1 6.9e-13 48.5 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|16081784|ref|NP_394171.1| - 4.2e-09 36.6 0.0 6.9e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|16081784|ref|NP_394171.1| - 6.8e-09 36.3 0.0 1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|16081784|ref|NP_394171.1| - 8.3e-06 26.1 0.0 2e-05 24.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|16081784|ref|NP_394171.1| - 0.15 12.5 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|16081785|ref|NP_394172.1| - 4e-20 72.1 0.1 6.1e-20 71.4 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16081785|ref|NP_394172.1| - 3.6e-10 40.4 0.0 5.4e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|16081785|ref|NP_394172.1| - 0.0027 18.1 0.0 0.0066 16.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 rve_3 PF13683.6 gi|16081785|ref|NP_394172.1| - 0.019 14.7 0.0 0.075 12.8 0.1 1.9 2 0 0 2 2 2 0 Integrase core domain Polysacc_synt_3 PF13440.6 gi|16081786|ref|NP_394173.1| - 3.9e-17 62.4 23.4 3.9e-17 62.4 23.4 2.0 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|16081786|ref|NP_394173.1| - 2.7e-16 59.9 22.1 2.7e-16 59.9 22.1 5.5 2 1 2 5 5 5 1 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|16081786|ref|NP_394173.1| - 1.8e-09 37.4 43.7 1.2e-06 28.3 19.0 3.4 3 1 0 3 3 3 2 MatE MurJ PF03023.14 gi|16081786|ref|NP_394173.1| - 2.4e-08 33.1 34.9 2.4e-08 33.1 34.9 2.0 1 1 1 2 2 2 1 Lipid II flippase MurJ Polysacc_synt PF01943.17 gi|16081786|ref|NP_394173.1| - 3.2e-08 33.3 36.8 3.2e-08 33.3 36.8 2.6 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein DUF2079 PF09852.9 gi|16082548|ref|NP_394174.1| - 2.5e-70 237.6 34.3 3.3e-70 237.2 34.3 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) Glyco_trans_1_4 PF13692.6 gi|16081788|ref|NP_394176.1| - 7.2e-19 68.6 0.0 2.2e-18 67.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|16081788|ref|NP_394176.1| - 1.2e-17 63.9 0.2 2e-17 63.3 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|16081788|ref|NP_394176.1| - 0.00086 19.3 0.0 0.0016 18.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 CbiK PF06180.11 gi|16081788|ref|NP_394176.1| - 0.011 15.1 1.3 0.012 15.0 0.2 1.7 2 0 0 2 2 2 0 Cobalt chelatase (CbiK) Glyco_trans_1_2 PF13524.6 gi|16081788|ref|NP_394176.1| - 0.074 13.5 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferases group 1 BDV_P24 PF06595.11 gi|16081788|ref|NP_394176.1| - 0.51 10.2 2.1 11 5.9 0.1 2.2 2 0 0 2 2 2 0 Borna disease virus P24 protein SSL_OB PF09199.10 gi|16081788|ref|NP_394176.1| - 3 8.3 8.8 0.31 11.4 1.4 2.8 3 1 0 3 3 3 0 Staphylococcal superantigen-like OB-fold domain DUF2079 PF09852.9 gi|16081790|ref|NP_394178.1| - 3.6e-138 461.3 29.6 4.3e-138 461.0 29.6 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) Glycos_transf_2 PF00535.26 gi|16081791|ref|NP_394179.1| - 1.1e-14 54.6 3.2 5.3e-14 52.4 3.2 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|16081791|ref|NP_394179.1| - 2.4e-09 37.4 0.0 1.5e-08 34.9 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Transposase_mut PF00872.18 gi|16081792|ref|NP_394180.1| - 0.0085 15.0 0.0 0.0097 14.8 0.0 1.0 1 0 0 1 1 1 1 Transposase, Mutator family Glycos_transf_1 PF00534.20 gi|16081793|ref|NP_394181.1| - 6.5e-11 42.1 0.0 6.7e-11 42.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16081793|ref|NP_394181.1| - 4.5e-08 33.6 0.0 4.6e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|16081793|ref|NP_394181.1| - 0.015 15.7 0.0 0.015 15.7 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferases group 1 GPI2 PF06432.11 gi|16081794|ref|NP_394182.1| - 2.7 7.4 13.5 0.15 11.5 6.2 2.0 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase Glyco_trans_1_4 PF13692.6 gi|16082549|ref|NP_394183.1| - 2.1e-18 67.1 0.0 3.8e-18 66.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 gi|16082549|ref|NP_394183.1| - 6e-17 61.7 0.7 1.1e-16 60.8 0.3 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Methyltransf_21 PF05050.12 gi|16082550|ref|NP_394184.1| - 3.7e-08 33.6 0.2 5.1e-08 33.1 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_18 PF12847.7 gi|16082550|ref|NP_394184.1| - 0.0052 16.7 0.0 0.0087 16.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|16082550|ref|NP_394184.1| - 0.012 15.3 0.7 0.11 12.2 0.5 2.0 2 0 0 2 2 2 0 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|16082550|ref|NP_394184.1| - 0.027 14.3 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|16082550|ref|NP_394184.1| - 0.073 12.5 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) TylF PF05711.11 gi|16081796|ref|NP_394186.1| - 1e-09 38.1 0.1 1.5e-09 37.5 0.1 1.2 1 0 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) Methyltransf_24 PF13578.6 gi|16081796|ref|NP_394186.1| - 3e-06 28.2 0.0 4.4e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF3139 PF11337.8 gi|16081798|ref|NP_394188.1| - 0.064 13.9 3.7 0.7 10.6 0.1 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) Mfp-3 PF04202.13 gi|16081798|ref|NP_394188.1| - 0.14 12.5 0.2 0.14 12.5 0.2 2.2 2 0 0 2 2 2 0 Foot protein 3 Cyclase PF04199.13 gi|16081800|ref|NP_394190.1| - 3.6e-29 101.7 0.0 4.5e-29 101.4 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase Pox_MCEL PF03291.16 gi|16081800|ref|NP_394190.1| - 0.027 13.6 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 mRNA capping enzyme AAA_14 PF13173.6 gi|16081801|ref|NP_394191.1| - 4.8e-32 110.7 0.1 9.2e-32 109.8 0.1 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|16081801|ref|NP_394191.1| - 9.7e-11 41.9 0.0 3.8e-10 40.0 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|16081801|ref|NP_394191.1| - 1.7e-05 24.9 0.2 0.0022 17.9 0.0 2.2 1 1 1 2 2 2 2 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|16081801|ref|NP_394191.1| - 0.0031 17.3 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|16081801|ref|NP_394191.1| - 0.0044 17.4 0.0 0.034 14.5 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 gi|16081801|ref|NP_394191.1| - 0.0051 17.2 0.0 0.081 13.3 0.0 2.3 2 0 0 2 2 2 1 RNA helicase AAA_25 PF13481.6 gi|16081801|ref|NP_394191.1| - 0.036 13.7 0.0 0.058 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|16081801|ref|NP_394191.1| - 0.039 13.5 0.0 0.07 12.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|16081801|ref|NP_394191.1| - 0.11 11.7 0.1 1.4 8.0 0.0 2.1 1 1 1 2 2 2 0 NB-ARC domain Fer4_6 PF12837.7 gi|16081802|ref|NP_394192.1| - 5.9e-10 38.8 10.6 6.3e-05 22.9 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16081802|ref|NP_394192.1| - 7.2e-07 29.7 28.3 8.2e-05 23.1 9.7 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|16081802|ref|NP_394192.1| - 1.8e-05 25.6 14.1 6.6e-05 23.8 4.4 1.6 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|16081802|ref|NP_394192.1| - 1.9e-05 24.3 13.1 0.013 15.3 3.2 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|16081802|ref|NP_394192.1| - 2.5e-05 24.3 6.7 0.00016 21.7 6.7 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16081802|ref|NP_394192.1| - 0.00028 20.9 8.7 0.0011 19.0 8.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16081802|ref|NP_394192.1| - 0.00036 21.0 6.6 0.0018 18.8 6.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16081802|ref|NP_394192.1| - 0.00043 20.3 3.3 0.055 13.6 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|16081802|ref|NP_394192.1| - 0.0014 19.0 5.2 0.004 17.6 5.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16081802|ref|NP_394192.1| - 0.011 16.2 11.2 0.035 14.6 1.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|16081802|ref|NP_394192.1| - 0.054 14.0 0.4 0.054 14.0 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|16081802|ref|NP_394192.1| - 0.61 11.2 11.2 6.7 7.9 0.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|16081802|ref|NP_394192.1| - 0.88 9.8 12.2 1.5 9.1 2.1 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Claudin_2 PF13903.6 gi|16082649|ref|NP_394194.1| - 0.087 12.6 3.1 0.13 12.0 3.1 1.4 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF3169 PF11368.8 gi|16082649|ref|NP_394194.1| - 0.096 12.2 4.5 0.15 11.6 4.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Zincin_1 PF06262.11 gi|16081804|ref|NP_394195.1| - 0.096 12.8 0.1 0.17 12.0 0.1 1.3 1 0 0 1 1 1 0 Zincin-like metallopeptidase Isochorismatase PF00857.20 gi|16081805|ref|NP_394196.1| - 1.7e-30 106.5 0.0 1.9e-30 106.4 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family HTH_34 PF13601.6 gi|16081806|ref|NP_394197.1| - 4.5e-12 46.0 0.1 5.4e-12 45.7 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|16081806|ref|NP_394197.1| - 7.1e-08 32.2 0.0 1.1e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|16081806|ref|NP_394197.1| - 4.9e-06 26.5 0.0 6e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|16081806|ref|NP_394197.1| - 4.9e-05 23.1 0.0 7.7e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|16081806|ref|NP_394197.1| - 0.00012 22.5 0.0 0.00023 21.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|16081806|ref|NP_394197.1| - 0.00019 21.3 0.0 0.0003 20.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|16081806|ref|NP_394197.1| - 0.00062 19.5 0.0 0.00082 19.1 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|16081806|ref|NP_394197.1| - 0.0011 18.7 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|16081806|ref|NP_394197.1| - 0.0022 17.8 0.0 0.0028 17.4 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_36 PF13730.6 gi|16081806|ref|NP_394197.1| - 0.0025 17.7 0.0 0.004 17.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2513 PF10711.9 gi|16081806|ref|NP_394197.1| - 0.0049 17.1 0.0 0.0069 16.7 0.0 1.3 1 1 0 1 1 1 1 Hypothetical protein (DUF2513) DUF977 PF06163.11 gi|16081806|ref|NP_394197.1| - 0.0079 16.1 0.0 0.0097 15.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) Rrf2 PF02082.20 gi|16081806|ref|NP_394197.1| - 0.051 13.9 0.0 0.078 13.3 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|16081806|ref|NP_394197.1| - 0.06 13.5 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|16081806|ref|NP_394197.1| - 0.068 13.0 0.0 0.15 11.9 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_24 PF13412.6 gi|16081806|ref|NP_394197.1| - 0.087 12.4 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|16081806|ref|NP_394197.1| - 0.1 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family ABC_tran PF00005.27 gi|16081807|ref|NP_394198.1| - 6.4e-25 88.3 0.0 1.4e-24 87.2 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|16081807|ref|NP_394198.1| - 4.5e-14 53.0 0.5 6.8e-09 36.0 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MukB PF04310.12 gi|16081807|ref|NP_394198.1| - 0.00012 22.0 0.0 0.00022 21.1 0.0 1.4 1 0 0 1 1 1 1 MukB N-terminal AAA_29 PF13555.6 gi|16081807|ref|NP_394198.1| - 0.00043 20.0 0.0 0.001 18.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|16081807|ref|NP_394198.1| - 0.0011 18.4 0.4 1.1 8.6 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|16081807|ref|NP_394198.1| - 0.0081 16.7 0.1 0.014 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|16081807|ref|NP_394198.1| - 0.015 15.6 0.2 0.11 12.8 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|16081807|ref|NP_394198.1| - 0.021 14.4 0.0 0.059 13.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain KdpD PF02702.17 gi|16081807|ref|NP_394198.1| - 0.11 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain MMR_HSR1 PF01926.23 gi|16081807|ref|NP_394198.1| - 0.13 12.4 0.0 0.28 11.3 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 gi|16081807|ref|NP_394198.1| - 0.13 11.9 0.0 0.82 9.3 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|16081807|ref|NP_394198.1| - 0.14 11.9 0.0 0.33 10.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain ABC2_membrane_2 PF12679.7 gi|16081808|ref|NP_394199.1| - 4.1e-20 72.2 22.1 8.9e-20 71.1 22.0 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|16081808|ref|NP_394199.1| - 1.6e-07 31.5 11.4 1.6e-07 31.5 11.4 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|16081808|ref|NP_394199.1| - 6.4e-06 25.5 28.2 6.4e-06 25.5 28.2 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF4231 PF14015.6 gi|16081808|ref|NP_394199.1| - 0.17 12.3 5.2 0.21 12.1 3.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4231) DUF1648 PF07853.11 gi|16081809|ref|NP_394200.1| - 2.5e-13 49.4 2.7 2.5e-13 49.4 2.7 3.2 3 0 0 3 3 3 1 Protein of unknown function (DUF1648) Protocadherin PF08374.11 gi|16081809|ref|NP_394200.1| - 0.032 14.2 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 Protocadherin GntR PF00392.21 gi|16081810|ref|NP_394201.1| - 4.7e-11 42.2 0.0 7.5e-11 41.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|16081810|ref|NP_394201.1| - 0.022 14.7 0.0 0.046 13.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|16081810|ref|NP_394201.1| - 0.095 12.6 0.0 1.9 8.4 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2075 PF09848.9 gi|16081811|ref|NP_394202.1| - 1.7e-59 201.9 0.0 2.2e-59 201.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|16081811|ref|NP_394202.1| - 9.1e-06 26.2 0.1 1.7e-05 25.3 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain ResIII PF04851.15 gi|16081811|ref|NP_394202.1| - 6.2e-05 23.1 0.0 0.00011 22.2 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|16081811|ref|NP_394202.1| - 0.0015 18.8 0.1 0.038 14.3 0.1 2.6 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 gi|16081811|ref|NP_394202.1| - 0.0023 17.2 0.0 0.0056 15.9 0.0 1.6 2 0 0 2 2 2 1 PIF1-like helicase PhoH PF02562.16 gi|16081811|ref|NP_394202.1| - 0.0039 16.7 0.0 0.68 9.4 0.0 2.5 3 0 0 3 3 3 1 PhoH-like protein DUF434 PF04256.12 gi|16081811|ref|NP_394202.1| - 0.0073 16.0 0.1 0.49 10.1 0.0 3.2 3 0 0 3 3 3 1 Protein of unknown function (DUF434) DEAD PF00270.29 gi|16081811|ref|NP_394202.1| - 0.0086 15.9 0.0 0.35 10.6 0.0 2.4 1 1 0 1 1 1 1 DEAD/DEAH box helicase ATPase PF06745.13 gi|16081811|ref|NP_394202.1| - 0.019 14.3 0.0 0.047 13.0 0.0 1.6 1 0 0 1 1 1 0 KaiC Zot PF05707.12 gi|16081811|ref|NP_394202.1| - 0.02 14.5 0.3 0.17 11.5 0.2 2.5 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) IstB_IS21 PF01695.17 gi|16081811|ref|NP_394202.1| - 0.023 14.5 0.1 0.095 12.4 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|16081811|ref|NP_394202.1| - 0.1 12.3 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|16081811|ref|NP_394202.1| - 0.12 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Methyltransf_31 PF13847.6 gi|16081812|ref|NP_394203.1| - 6.8e-11 42.2 0.2 1.4e-10 41.2 0.2 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16081812|ref|NP_394203.1| - 2.6e-10 40.8 0.0 4.1e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16081812|ref|NP_394203.1| - 7.4e-10 39.4 0.0 1.3e-09 38.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081812|ref|NP_394203.1| - 7e-09 36.3 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|16081812|ref|NP_394203.1| - 6.1e-08 32.4 0.0 8.9e-08 31.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|16081812|ref|NP_394203.1| - 0.00039 20.3 0.0 0.00094 19.0 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|16081812|ref|NP_394203.1| - 0.0004 20.4 0.0 0.0004 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|16081812|ref|NP_394203.1| - 0.001 18.9 0.0 0.0014 18.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Met_10 PF02475.16 gi|16081812|ref|NP_394203.1| - 0.0011 18.7 0.1 0.0017 18.1 0.1 1.4 1 1 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|16081812|ref|NP_394203.1| - 0.0016 17.9 0.0 0.002 17.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|16081812|ref|NP_394203.1| - 0.0034 16.7 0.0 0.0045 16.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|16081812|ref|NP_394203.1| - 0.0054 16.9 0.0 0.0065 16.6 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase GidB PF02527.15 gi|16081812|ref|NP_394203.1| - 0.028 13.7 0.0 0.041 13.2 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G DUF1168 PF06658.12 gi|16081812|ref|NP_394203.1| - 0.048 13.5 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) RrnaAD PF00398.20 gi|16081812|ref|NP_394203.1| - 0.13 11.3 0.0 0.28 10.2 0.0 1.6 1 1 0 1 1 1 0 Ribosomal RNA adenine dimethylase AIM24 PF01987.17 gi|16081813|ref|NP_394204.1| - 5.9e-50 169.9 0.1 6.6e-50 169.7 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Thermopsin PF05317.11 gi|16082551|ref|NP_394205.1| - 7.8e-62 209.1 18.5 2.4e-60 204.2 7.3 3.6 3 0 0 3 3 3 2 Thermopsin Pro-kuma_activ PF09286.11 gi|16082551|ref|NP_394205.1| - 1.1e-26 93.8 0.0 2.2e-26 92.8 0.0 1.5 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain NosD PF05048.13 gi|16082551|ref|NP_394205.1| - 0.0043 16.4 13.6 0.0043 16.4 13.6 2.5 2 1 0 2 2 2 1 Periplasmic copper-binding protein (NosD) CAP_N PF01213.19 gi|16082551|ref|NP_394205.1| - 4.5 6.7 9.3 7.5 5.9 9.3 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PLDc_2 PF13091.6 gi|16081814|ref|NP_394206.1| - 6e-30 103.9 0.1 2.8e-16 59.6 0.0 2.1 2 0 0 2 2 2 2 PLD-like domain APOBEC_C PF05240.14 gi|16081814|ref|NP_394206.1| - 0.0068 16.3 0.2 2.3 8.2 0.0 2.8 3 0 0 3 3 3 2 APOBEC-like C-terminal domain PLDc PF00614.22 gi|16081814|ref|NP_394206.1| - 0.031 14.5 4.0 0.11 12.7 0.1 3.3 3 1 0 3 3 3 0 Phospholipase D Active site motif DUF1082 PF06449.11 gi|16081814|ref|NP_394206.1| - 0.061 13.2 0.0 0.18 11.6 0.0 1.8 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) SpoU_sub_bind PF08032.12 gi|16081814|ref|NP_394206.1| - 0.16 12.3 0.0 6.3 7.2 0.0 2.6 3 0 0 3 3 3 0 RNA 2'-O ribose methyltransferase substrate binding SNAD4 PF18750.1 gi|16081814|ref|NP_394206.1| - 0.2 11.8 0.1 5.3 7.2 0.0 2.4 2 0 0 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 4 DUF2004 PF09406.10 gi|16081815|ref|NP_394207.1| - 2.5e-19 69.5 0.9 3e-19 69.3 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2004) rhaM PF05336.13 gi|16081816|ref|NP_394208.1| - 8.6e-25 86.9 0.0 9.5e-25 86.8 0.0 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase DHDPS PF00701.22 gi|16081817|ref|NP_394209.1| - 8.8e-13 47.6 0.0 1.4e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Sugar_tr PF00083.24 gi|16081818|ref|NP_394210.1| - 6.8e-31 107.6 32.1 8.7e-31 107.3 32.1 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081818|ref|NP_394210.1| - 2.1e-21 76.3 85.5 4.4e-20 71.9 46.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily adh_short_C2 PF13561.6 gi|16081819|ref|NP_394211.1| - 1.4e-53 181.8 0.0 1.7e-53 181.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081819|ref|NP_394211.1| - 1.2e-44 152.1 0.1 1.4e-44 151.9 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081819|ref|NP_394211.1| - 1e-14 54.8 0.1 1.4e-14 54.4 0.1 1.1 1 0 0 1 1 1 1 KR domain F420_oxidored PF03807.17 gi|16081819|ref|NP_394211.1| - 0.047 14.3 0.1 0.093 13.3 0.1 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent HTH_10 PF04967.12 gi|16081820|ref|NP_394212.1| - 1.6e-20 72.6 0.0 2.6e-20 72.0 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain HTH_17 PF12728.7 gi|16081820|ref|NP_394212.1| - 0.00013 22.1 0.1 0.0011 19.1 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain SpoIIID PF12116.8 gi|16081820|ref|NP_394212.1| - 0.00096 19.2 0.0 0.0019 18.3 0.0 1.4 1 0 0 1 1 1 1 Stage III sporulation protein D Sigma70_r4_2 PF08281.12 gi|16081820|ref|NP_394212.1| - 0.0011 18.6 0.0 0.0081 15.8 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_IclR PF09339.10 gi|16081820|ref|NP_394212.1| - 0.0031 17.3 0.0 0.0086 15.9 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_23 PF13384.6 gi|16081820|ref|NP_394212.1| - 0.0039 17.0 0.0 0.0096 15.7 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_24 PF13412.6 gi|16081820|ref|NP_394212.1| - 0.01 15.4 0.0 0.03 13.9 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|16081820|ref|NP_394212.1| - 0.013 15.4 0.0 0.034 14.1 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|16081820|ref|NP_394212.1| - 0.015 15.4 0.1 0.18 11.9 0.0 2.4 3 0 0 3 3 2 0 Helix-turn-helix MarR_2 PF12802.7 gi|16081820|ref|NP_394212.1| - 0.028 14.3 0.0 0.058 13.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|16081820|ref|NP_394212.1| - 0.055 13.4 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 HTH domain HTH_Mga PF08280.11 gi|16081820|ref|NP_394212.1| - 0.06 13.4 0.0 0.26 11.3 0.0 2.1 3 0 0 3 3 2 0 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4 PF04545.16 gi|16081820|ref|NP_394212.1| - 0.089 12.3 0.6 0.94 9.0 0.2 2.6 2 1 0 2 2 2 0 Sigma-70, region 4 HTH_5 PF01022.20 gi|16081820|ref|NP_394212.1| - 0.1 12.5 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|16081820|ref|NP_394212.1| - 0.11 12.4 0.2 0.67 9.9 0.0 2.3 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB LacI PF00356.21 gi|16081820|ref|NP_394212.1| - 0.13 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family HTH_28 PF13518.6 gi|16081820|ref|NP_394212.1| - 0.17 12.1 0.2 0.76 9.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain ADH_N PF08240.12 gi|16081821|ref|NP_394213.1| - 4.9e-33 113.3 0.2 1e-32 112.3 0.2 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|16081821|ref|NP_394213.1| - 3.1e-14 53.1 0.0 5.8e-14 52.2 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|16081821|ref|NP_394213.1| - 3.2e-08 33.3 0.0 4.2e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|16081821|ref|NP_394213.1| - 0.0069 17.4 0.0 0.014 16.5 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase FAD_binding_3 PF01494.19 gi|16081821|ref|NP_394213.1| - 0.021 14.1 0.0 0.025 13.8 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain AlaDh_PNT_C PF01262.21 gi|16081821|ref|NP_394213.1| - 0.051 12.9 0.0 0.076 12.3 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ThiF PF00899.21 gi|16081821|ref|NP_394213.1| - 0.061 12.7 1.3 3 7.2 0.4 2.1 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 gi|16081821|ref|NP_394213.1| - 0.089 13.1 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain FAA_hydrolase PF01557.18 gi|16081822|ref|NP_394214.1| - 1e-62 211.6 0.0 1.3e-62 211.3 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Lactamase_B PF00753.27 gi|16081823|ref|NP_394215.1| - 0.0036 17.3 0.0 2.6 8.0 0.0 2.2 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily MR_MLE_C PF13378.6 gi|16081824|ref|NP_394216.1| - 3.8e-46 157.4 0.0 4.8e-46 157.1 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|16081824|ref|NP_394216.1| - 2.2e-05 24.7 0.0 7.2e-05 23.0 0.0 1.8 1 1 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Enolase_C PF00113.22 gi|16081824|ref|NP_394216.1| - 0.17 11.1 0.2 0.54 9.4 0.0 1.8 2 1 1 3 3 3 0 Enolase, C-terminal TIM barrel domain UxuA PF03786.13 gi|16081825|ref|NP_394217.1| - 1.8e-127 425.0 0.1 2.4e-79 266.7 0.0 2.0 1 1 1 2 2 2 2 D-mannonate dehydratase (UxuA) AP_endonuc_2 PF01261.24 gi|16081825|ref|NP_394217.1| - 1.2e-12 47.8 0.0 1.6e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel adh_short_C2 PF13561.6 gi|16081826|ref|NP_394218.1| - 4.9e-60 203.0 0.0 7e-60 202.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081826|ref|NP_394218.1| - 4.1e-48 163.4 0.3 1e-47 162.2 0.3 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081826|ref|NP_394218.1| - 7e-08 32.6 0.1 7.7e-06 25.9 0.1 2.2 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|16081826|ref|NP_394218.1| - 0.00064 19.2 0.1 0.0028 17.1 0.1 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Semialdhyde_dh PF01118.24 gi|16081826|ref|NP_394218.1| - 0.062 13.7 0.1 0.43 11.0 0.0 2.0 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 gi|16081826|ref|NP_394218.1| - 0.092 11.7 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family zf-ribbon_3 PF13248.6 gi|16082650|ref|NP_394219.1| - 0.00013 21.2 1.9 0.098 12.1 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|16082650|ref|NP_394219.1| - 0.0019 17.9 2.4 0.74 9.6 0.3 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|16082650|ref|NP_394219.1| - 0.002 18.1 0.1 0.003 17.6 0.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-TFIIB PF13453.6 gi|16082650|ref|NP_394219.1| - 0.0022 17.3 0.1 1.3 8.4 0.0 2.3 2 0 0 2 2 2 2 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|16082650|ref|NP_394219.1| - 0.0024 17.9 0.9 1.4 9.1 0.1 2.2 2 0 0 2 2 2 2 Zinc ribbon domain DUF35_N PF12172.8 gi|16082650|ref|NP_394219.1| - 0.011 15.6 3.1 0.22 11.5 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.12 gi|16082650|ref|NP_394219.1| - 0.013 15.0 1.9 1.2 8.7 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding YhfH PF14149.6 gi|16082650|ref|NP_394219.1| - 0.015 15.3 1.9 2.1 8.4 0.4 2.3 2 0 0 2 2 2 0 YhfH-like protein Nudix_N_2 PF14803.6 gi|16082650|ref|NP_394219.1| - 0.015 15.2 1.0 4.4 7.3 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal zf-HIT PF04438.16 gi|16082650|ref|NP_394219.1| - 0.019 14.9 2.0 0.99 9.3 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_13 PF09855.9 gi|16082650|ref|NP_394219.1| - 0.022 14.9 2.1 0.12 12.5 2.1 1.9 1 1 0 1 1 1 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-IS66 PF13005.7 gi|16082650|ref|NP_394219.1| - 0.028 14.8 0.5 7.9 7.0 0.1 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 Mu-like_Com PF10122.9 gi|16082650|ref|NP_394219.1| - 0.031 13.7 0.1 1 8.8 0.0 2.1 2 0 0 2 2 2 0 Mu-like prophage protein Com HypA PF01155.19 gi|16082650|ref|NP_394219.1| - 0.032 14.2 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_SprT PF17283.2 gi|16082650|ref|NP_394219.1| - 0.034 14.1 1.2 0.59 10.1 0.2 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ISL3 PF14690.6 gi|16082650|ref|NP_394219.1| - 0.054 14.2 0.8 5.6 7.7 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-LITAF-like PF10601.9 gi|16082650|ref|NP_394219.1| - 0.062 13.6 0.2 5.8 7.3 0.2 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain GFA PF04828.14 gi|16082650|ref|NP_394219.1| - 0.068 13.5 1.3 0.9 9.9 0.1 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_10 PF10058.9 gi|16082650|ref|NP_394219.1| - 0.076 12.8 0.8 0.88 9.3 0.1 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-H2C2_2 PF13465.6 gi|16082650|ref|NP_394219.1| - 0.086 13.3 1.4 1.5 9.4 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain zf_UBZ PF18439.1 gi|16082650|ref|NP_394219.1| - 0.093 12.3 1.5 2.4 7.9 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 gi|16082650|ref|NP_394219.1| - 0.094 12.5 4.4 4.4 7.1 0.5 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-tcix PF14952.6 gi|16082650|ref|NP_394219.1| - 0.12 12.0 2.7 4.3 7.0 0.1 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Desulfoferrod_N PF06397.12 gi|16082650|ref|NP_394219.1| - 0.13 11.9 2.0 2.3 7.9 0.1 2.4 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zinc_ribbon_4 PF13717.6 gi|16082650|ref|NP_394219.1| - 0.14 12.1 2.4 10 6.1 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain CpXC PF14353.6 gi|16082650|ref|NP_394219.1| - 0.15 12.1 0.6 1.6 8.8 0.1 2.0 2 0 0 2 2 2 0 CpXC protein zf-RING_7 PF02591.15 gi|16082650|ref|NP_394219.1| - 0.15 12.2 1.9 1.1 9.5 0.0 2.1 2 0 0 2 2 2 0 C4-type zinc ribbon domain DUF1451 PF07295.11 gi|16082650|ref|NP_394219.1| - 0.2 11.7 1.5 0.35 10.9 0.0 1.8 1 1 1 2 2 2 0 Zinc-ribbon containing domain zf-RRN7 PF11781.8 gi|16082650|ref|NP_394219.1| - 0.32 10.7 4.0 0.33 10.7 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-C2H2_6 PF13912.6 gi|16082650|ref|NP_394219.1| - 0.41 10.7 3.4 1.6 8.8 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger A2L_zn_ribbon PF08792.10 gi|16082650|ref|NP_394219.1| - 0.46 10.3 3.8 2.3 8.0 1.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-C2H2 PF00096.26 gi|16082650|ref|NP_394219.1| - 0.66 10.5 4.3 4.9 7.8 0.8 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type MR_MLE_C PF13378.6 gi|16081827|ref|NP_394220.1| - 7.9e-56 189.1 0.0 1.1e-55 188.6 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|16081827|ref|NP_394220.1| - 2.1e-12 47.3 0.0 3.8e-12 46.4 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF2207 PF09972.9 gi|16081828|ref|NP_394221.1| - 0.046 12.5 1.5 0.076 11.8 1.5 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DNA_pol_B_thumb PF14791.6 gi|16081829|ref|NP_394222.1| - 6.4e-21 74.3 0.0 3.9e-20 71.8 0.0 2.2 2 0 0 2 2 2 1 DNA polymerase beta thumb HHH_5 PF14520.6 gi|16081829|ref|NP_394222.1| - 1.5e-14 54.3 0.4 2.4e-09 37.7 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|16081829|ref|NP_394222.1| - 1.2e-12 48.0 3.7 2.5e-10 40.5 0.7 2.9 3 0 0 3 3 3 2 Helix-hairpin-helix domain DNA_pol_B_palm PF14792.6 gi|16081829|ref|NP_394222.1| - 0.00013 22.1 0.1 0.00027 21.1 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase beta palm HHH_3 PF12836.7 gi|16081829|ref|NP_394222.1| - 0.00055 20.1 0.2 0.11 12.8 0.0 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|16081829|ref|NP_394222.1| - 0.00059 19.9 0.1 0.047 13.8 0.0 3.0 2 1 1 3 3 3 1 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|16081829|ref|NP_394222.1| - 0.0037 17.5 0.0 0.067 13.6 0.0 2.6 2 0 0 2 2 2 1 IMS family HHH motif RNA_pol_A_CTD PF03118.15 gi|16081829|ref|NP_394222.1| - 0.0073 16.1 0.0 0.021 14.6 0.0 1.7 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain Glycos_transf_2 PF00535.26 gi|16081831|ref|NP_394224.1| - 1.4e-28 99.9 0.0 1.9e-28 99.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|16081831|ref|NP_394224.1| - 5.8e-09 36.2 0.0 7.8e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 NTP_transf_3 PF12804.7 gi|16081831|ref|NP_394224.1| - 4.1e-05 24.0 0.0 5.4e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glyco_tranf_2_2 PF10111.9 gi|16081831|ref|NP_394224.1| - 8.5e-05 22.2 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|16081831|ref|NP_394224.1| - 0.00039 20.9 0.0 0.0013 19.2 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|16081831|ref|NP_394224.1| - 0.024 14.1 0.0 0.062 12.8 0.0 1.8 1 1 0 1 1 1 0 Glycosyl transferase family 21 SQAPI PF16845.5 gi|16081831|ref|NP_394224.1| - 0.059 13.7 0.0 7.9 6.9 0.0 2.5 2 0 0 2 2 2 0 Aspartic acid proteinase inhibitor Isochorismatase PF00857.20 gi|16081832|ref|NP_394225.1| - 5.2e-13 49.5 0.0 6.2e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family ArenaCapSnatch PF17296.2 gi|16081832|ref|NP_394225.1| - 0.11 12.0 0.0 0.5 9.8 0.0 2.0 2 0 0 2 2 2 0 Arenavirus cap snatching domain PAPS_reduct PF01507.19 gi|16081832|ref|NP_394225.1| - 0.11 12.6 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family AAA_18 PF13238.6 gi|16081833|ref|NP_394226.1| - 4.7e-07 30.4 0.0 2.1e-06 28.3 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|16081833|ref|NP_394226.1| - 8.6e-06 26.0 0.0 1.8e-05 24.9 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|16081833|ref|NP_394226.1| - 9.7e-05 22.8 0.0 0.00082 19.8 0.0 2.1 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|16081833|ref|NP_394226.1| - 0.0035 16.6 0.0 0.028 13.7 0.0 2.0 2 0 0 2 2 2 1 Zeta toxin RuvB_N PF05496.12 gi|16081833|ref|NP_394226.1| - 0.1 12.3 0.0 0.39 10.5 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 gi|16081833|ref|NP_394226.1| - 0.13 12.6 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ArsA_ATPase PF02374.15 gi|16081833|ref|NP_394226.1| - 0.19 10.9 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase PIN_9 PF18477.1 gi|16081834|ref|NP_394227.1| - 2.4e-13 50.4 0.1 2.8e-13 50.2 0.1 1.0 1 0 0 1 1 1 1 PIN like domain PIN PF01850.21 gi|16081834|ref|NP_394227.1| - 8.2e-09 36.0 0.1 0.00018 22.0 0.1 2.1 1 1 1 2 2 2 2 PIN domain PIN_4 PF13638.6 gi|16081834|ref|NP_394227.1| - 0.00022 21.5 0.0 0.00071 19.9 0.0 1.7 1 1 1 2 2 2 1 PIN domain DUF5615 PF18480.1 gi|16081834|ref|NP_394227.1| - 0.00052 19.7 0.0 0.001 18.8 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5615) PIN_2 PF10130.9 gi|16081834|ref|NP_394227.1| - 0.00076 19.7 0.0 0.64 10.3 0.1 2.1 1 1 1 2 2 2 2 PIN domain DUF3834 PF12916.7 gi|16081834|ref|NP_394227.1| - 0.064 12.5 0.2 0.1 11.8 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3834) PIN_12 PF16289.5 gi|16081834|ref|NP_394227.1| - 0.075 13.5 0.0 0.14 12.7 0.0 1.4 1 1 0 1 1 1 0 PIN domain Lactamase_B_3 PF13483.6 gi|16082552|ref|NP_394228.1| - 3e-30 105.3 0.1 3.6e-30 105.0 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|16082552|ref|NP_394228.1| - 1.5e-25 89.9 0.1 1.9e-25 89.6 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|16082552|ref|NP_394228.1| - 4.3e-08 33.4 1.6 1.3e-07 31.9 1.6 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Aminotran_1_2 PF00155.21 gi|16081835|ref|NP_394229.1| - 7.3e-54 183.3 0.0 8.3e-54 183.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 gi|16081835|ref|NP_394229.1| - 1.9e-06 27.0 0.0 2.8e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.20 gi|16081835|ref|NP_394229.1| - 4.2e-05 22.3 0.0 6.6e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme HicB_lk_antitox PF15919.5 gi|16081836|ref|NP_394230.1| - 6.3e-15 55.4 0.1 6.5e-15 55.3 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system AMP-binding PF00501.28 gi|16081838|ref|NP_394232.1| - 4.5e-84 282.5 0.0 5.3e-84 282.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|16081838|ref|NP_394232.1| - 1.3e-19 70.9 0.0 5.3e-19 69.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|16081838|ref|NP_394232.1| - 0.0027 17.6 0.1 0.0053 16.7 0.1 1.5 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus TPP_enzyme_C PF02775.21 gi|16082553|ref|NP_394234.1| - 8.9e-27 93.8 0.3 1.3e-26 93.2 0.3 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|16082553|ref|NP_394234.1| - 1.5e-26 92.3 1.1 2.9e-26 91.4 1.1 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.19 gi|16081840|ref|NP_394235.1| - 3e-56 190.8 0.0 5.2e-56 190.0 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|16081840|ref|NP_394235.1| - 3.3e-37 128.3 0.1 1.4e-35 123.0 0.0 2.5 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|16081840|ref|NP_394235.1| - 2.6e-11 43.7 0.0 8.1e-10 38.9 0.0 2.6 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|16081840|ref|NP_394235.1| - 1.2e-07 31.7 0.1 5.3e-07 29.6 0.0 2.3 3 0 0 3 3 3 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|16081840|ref|NP_394235.1| - 0.00019 21.1 0.0 0.0004 20.0 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTP_transf_like PF01467.26 gi|16081841|ref|NP_394236.1| - 3.7e-12 46.7 0.1 6.3e-12 45.9 0.1 1.4 1 1 0 1 1 1 1 Cytidylyltransferase-like N6_N4_Mtase PF01555.18 gi|16081841|ref|NP_394236.1| - 0.13 12.0 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 DNA methylase Sugar_tr PF00083.24 gi|16081842|ref|NP_394237.1| - 2e-67 228.1 27.1 2.4e-67 227.8 27.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081842|ref|NP_394237.1| - 6.1e-36 124.1 58.7 6.8e-34 117.3 36.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily YfzA PF14118.6 gi|16081842|ref|NP_394237.1| - 0.033 14.6 2.2 0.033 14.6 2.2 2.4 2 0 0 2 2 2 0 YfzA-like protein ELFV_dehydrog PF00208.21 gi|16081843|ref|NP_394238.1| - 1.1e-73 247.9 0.2 1.9e-73 247.2 0.2 1.4 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|16081843|ref|NP_394238.1| - 1.2e-56 190.2 0.0 2.2e-56 189.3 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|16081843|ref|NP_394238.1| - 0.019 14.4 1.3 0.053 12.9 0.4 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain tRNA-synt_1 PF00133.22 gi|16081844|ref|NP_394239.1| - 3.4e-60 203.9 1.0 3.3e-50 171.0 0.6 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|16081844|ref|NP_394239.1| - 7.2e-24 84.3 1.2 9e-11 41.1 0.0 3.3 2 1 1 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|16081844|ref|NP_394239.1| - 1.9e-14 53.9 0.0 4.9e-14 52.6 0.0 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.6 gi|16081844|ref|NP_394239.1| - 4.6e-10 39.3 0.4 1.4e-09 37.7 0.4 1.8 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|16081844|ref|NP_394239.1| - 3.5e-09 36.4 0.1 0.00019 20.9 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|16081844|ref|NP_394239.1| - 0.0002 20.4 0.1 0.0083 15.1 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class I (K) DUF2703 PF10865.8 gi|16081844|ref|NP_394239.1| - 0.031 14.5 0.2 0.13 12.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2703) PvlArgDC PF01862.16 gi|16081845|ref|NP_394240.1| - 3.1e-58 196.1 0.1 3.6e-58 196.0 0.1 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) P5CR_dimer PF14748.6 gi|16081845|ref|NP_394240.1| - 0.12 12.7 0.9 0.34 11.2 0.6 1.8 2 0 0 2 2 2 0 Pyrroline-5-carboxylate reductase dimerisation 2-Hacid_dh_C PF02826.19 gi|16081846|ref|NP_394241.1| - 4.4e-58 195.6 0.0 6.6e-58 195.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|16081846|ref|NP_394241.1| - 9e-30 103.1 0.0 1.1e-29 102.8 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|16081846|ref|NP_394241.1| - 1e-06 29.0 0.1 2.3e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|16081846|ref|NP_394241.1| - 6.7e-05 22.5 0.0 0.00014 21.5 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain F420_oxidored PF03807.17 gi|16081846|ref|NP_394241.1| - 0.0016 19.0 0.0 0.005 17.4 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent TrkA_N PF02254.18 gi|16081846|ref|NP_394241.1| - 0.0061 16.8 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain GFO_IDH_MocA PF01408.22 gi|16081846|ref|NP_394241.1| - 0.017 16.0 0.0 0.04 14.8 0.0 1.7 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ApbA PF02558.16 gi|16081846|ref|NP_394241.1| - 0.038 13.6 0.0 0.55 9.9 0.0 2.7 4 0 0 4 4 4 0 Ketopantoate reductase PanE/ApbA TPP_enzyme_N PF02776.18 gi|16081847|ref|NP_394242.1| - 7.7e-30 103.7 0.1 6.8e-29 100.7 0.1 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|16081847|ref|NP_394242.1| - 1.2e-21 77.1 0.0 8e-20 71.2 0.0 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|16081847|ref|NP_394242.1| - 2.2e-15 56.6 0.0 4.4e-15 55.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain GFO_IDH_MocA PF01408.22 gi|16081848|ref|NP_394243.1| - 4.3e-18 66.3 0.1 6.7e-18 65.7 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|16081848|ref|NP_394243.1| - 2.9e-05 24.1 0.1 5.1e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Sugar_tr PF00083.24 gi|16081849|ref|NP_394244.1| - 6.9e-36 124.1 17.4 8.9e-36 123.7 17.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16081849|ref|NP_394244.1| - 1.2e-17 63.9 28.1 1.6e-17 63.5 28.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4175 PF13779.6 gi|16081849|ref|NP_394244.1| - 0.28 9.1 0.5 0.45 8.4 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) N6_Mtase PF02384.16 gi|16081850|ref|NP_394245.1| - 3.2e-10 39.8 0.0 4.9e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Eco57I PF07669.11 gi|16081850|ref|NP_394245.1| - 0.00045 20.7 0.1 0.0017 18.8 0.1 1.9 2 0 0 2 2 2 1 Eco57I restriction-modification methylase Methyltransf_31 PF13847.6 gi|16081850|ref|NP_394245.1| - 0.0062 16.4 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|16081850|ref|NP_394245.1| - 0.017 14.8 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_32 PF13679.6 gi|16081850|ref|NP_394245.1| - 0.042 13.8 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF998 PF06197.13 gi|16081852|ref|NP_394247.1| - 1.3e-25 90.1 24.3 1.6e-25 89.8 24.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DUF3488 PF11992.8 gi|16081852|ref|NP_394247.1| - 1.2 8.0 5.8 1.8 7.5 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) YfhO PF09586.10 gi|16081852|ref|NP_394247.1| - 5.1 5.2 8.1 6.1 4.9 8.1 1.3 1 0 0 1 1 1 0 Bacterial membrane protein YfhO SMC_N PF02463.19 gi|16081854|ref|NP_394249.1| - 5.6e-50 169.8 10.8 1.3e-49 168.6 10.8 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|16081854|ref|NP_394249.1| - 4.9e-27 94.6 0.0 1.3e-26 93.2 0.0 1.8 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_15 PF13175.6 gi|16081854|ref|NP_394249.1| - 1.2e-13 51.5 43.6 2.7e-13 50.4 7.7 4.1 2 2 0 2 2 2 1 AAA ATPase domain Spc7 PF08317.11 gi|16081854|ref|NP_394249.1| - 1.2e-08 34.2 100.8 8.4e-06 24.9 16.5 6.8 2 2 5 7 7 7 6 Spc7 kinetochore protein AAA_23 PF13476.6 gi|16081854|ref|NP_394249.1| - 1.5e-07 32.1 100.4 5e-07 30.4 48.2 6.6 2 2 1 3 3 2 1 AAA domain AAA_13 PF13166.6 gi|16081854|ref|NP_394249.1| - 1.3e-06 27.4 76.7 0.00081 18.2 18.4 5.4 4 1 0 5 5 5 2 AAA domain AAA_21 PF13304.6 gi|16081854|ref|NP_394249.1| - 1.1e-05 25.4 25.8 0.00043 20.2 0.5 5.3 2 2 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system APG6_N PF17675.1 gi|16081854|ref|NP_394249.1| - 1.5e-05 25.5 98.1 0.0094 16.5 7.7 6.8 4 1 3 7 7 6 3 Apg6 coiled-coil region AAA_29 PF13555.6 gi|16081854|ref|NP_394249.1| - 2.7e-05 23.8 0.0 5e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF5082 PF16888.5 gi|16081854|ref|NP_394249.1| - 0.00011 22.5 7.5 0.00011 22.5 7.5 7.8 3 2 4 8 8 8 2 Domain of unknown function (DUF5082) Atg14 PF10186.9 gi|16081854|ref|NP_394249.1| - 0.00038 19.7 11.3 0.00038 19.7 11.3 6.5 2 2 4 6 6 6 3 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 gi|16081854|ref|NP_394249.1| - 0.0018 16.5 9.4 0.0018 16.5 9.4 6.6 2 2 3 5 5 5 1 Septation ring formation regulator, EzrA Laminin_II PF06009.12 gi|16081854|ref|NP_394249.1| - 0.0023 17.9 1.0 0.0023 17.9 1.0 9.0 2 2 8 10 10 10 1 Laminin Domain II MscS_porin PF12795.7 gi|16081854|ref|NP_394249.1| - 0.0035 16.9 7.7 0.0035 16.9 7.7 5.4 3 2 1 5 5 5 2 Mechanosensitive ion channel porin domain Baculo_PEP_C PF04513.12 gi|16081854|ref|NP_394249.1| - 0.0051 16.8 19.7 0.14 12.2 0.4 6.1 4 2 1 6 6 5 2 Baculovirus polyhedron envelope protein, PEP, C terminus Osmo_CC PF08946.10 gi|16081854|ref|NP_394249.1| - 0.023 14.9 1.1 0.023 14.9 1.1 9.2 8 2 1 9 9 9 0 Osmosensory transporter coiled coil TMPIT PF07851.13 gi|16081854|ref|NP_394249.1| - 0.026 13.8 0.4 0.026 13.8 0.4 7.8 2 2 5 7 7 7 0 TMPIT-like protein Corona_S2 PF01601.16 gi|16081854|ref|NP_394249.1| - 0.13 10.7 2.9 1.5 7.2 0.7 3.4 2 1 0 2 2 2 0 Coronavirus S2 glycoprotein ATG16 PF08614.11 gi|16081854|ref|NP_394249.1| - 0.14 12.4 95.2 0.084 13.1 2.6 8.0 3 2 3 7 7 7 0 Autophagy protein 16 (ATG16) YabA PF06156.13 gi|16081854|ref|NP_394249.1| - 0.38 11.4 60.5 0.2 12.3 1.4 8.4 5 2 2 8 8 8 0 Initiation control protein YabA KASH_CCD PF14662.6 gi|16081854|ref|NP_394249.1| - 0.66 9.8 83.7 0.049 13.5 7.4 5.8 4 1 2 6 6 6 0 Coiled-coil region of CCDC155 or KASH TPR_MLP1_2 PF07926.12 gi|16081854|ref|NP_394249.1| - 1.2 9.2 90.8 0.064 13.3 6.4 9.0 2 2 5 8 8 8 0 TPR/MLP1/MLP2-like protein Fib_alpha PF08702.10 gi|16081854|ref|NP_394249.1| - 1.5 9.0 64.7 0.039 14.1 5.7 7.8 3 2 4 8 8 8 0 Fibrinogen alpha/beta chain family Sec34 PF04136.15 gi|16081854|ref|NP_394249.1| - 1.8 8.4 41.3 0.83 9.5 0.1 8.5 4 3 4 9 9 9 0 Sec34-like family BRE1 PF08647.11 gi|16081854|ref|NP_394249.1| - 2.5 8.2 88.1 0.49 10.5 7.8 8.3 5 2 2 8 8 8 0 BRE1 E3 ubiquitin ligase HMMR_N PF15905.5 gi|16081854|ref|NP_394249.1| - 2.7 7.4 95.4 0.035 13.6 23.2 6.3 2 2 4 6 6 6 0 Hyaluronan mediated motility receptor N-terminal LPP PF04728.13 gi|16081854|ref|NP_394249.1| - 3.4 8.1 33.9 2.5 8.5 0.2 9.6 9 2 0 9 9 8 0 Lipoprotein leucine-zipper DUF1664 PF07889.12 gi|16081854|ref|NP_394249.1| - 4.4 7.4 64.0 0.086 12.9 0.8 8.8 2 2 5 9 9 9 0 Protein of unknown function (DUF1664) Orn_Arg_deC_N PF02784.16 gi|16082554|ref|NP_394250.1| - 8.3e-40 136.7 0.0 1e-39 136.4 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|16082554|ref|NP_394250.1| - 8.7e-13 48.3 0.0 1.1e-12 48.0 0.0 1.3 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA_permease_2 PF13520.6 gi|16081855|ref|NP_394251.1| - 3.5e-39 134.8 63.8 3.5e-39 134.8 63.8 2.6 1 1 0 2 2 2 1 Amino acid permease AA_permease PF00324.21 gi|16081855|ref|NP_394251.1| - 6.3e-27 94.3 47.5 6.3e-27 94.3 47.5 2.2 2 0 0 2 2 2 1 Amino acid permease HhH-GPD PF00730.25 gi|16082555|ref|NP_394252.1| - 5.3e-21 75.1 0.0 9.4e-21 74.3 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|16082555|ref|NP_394252.1| - 4.6e-08 32.5 0.1 2.7e-07 30.1 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|16082555|ref|NP_394252.1| - 2e-05 25.1 0.1 0.072 13.7 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|16082555|ref|NP_394252.1| - 0.0015 18.6 0.0 0.36 11.0 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|16082555|ref|NP_394252.1| - 0.0045 17.3 6.8 0.0079 16.5 6.8 1.4 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III CPSase_L_D2 PF02786.17 gi|16081856|ref|NP_394253.1| - 1.3e-81 273.2 0.1 7.6e-61 205.3 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|16081856|ref|NP_394253.1| - 4.6e-28 98.0 0.0 1.2e-27 96.7 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|16081856|ref|NP_394253.1| - 1.7e-20 73.0 0.0 5.5e-20 71.4 0.0 2.0 1 0 0 1 1 1 1 MGS-like domain ATPgrasp_Ter PF15632.6 gi|16081856|ref|NP_394253.1| - 3.7e-14 52.6 0.0 6.6e-06 25.9 0.0 3.3 3 1 0 3 3 3 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|16081856|ref|NP_394253.1| - 4.3e-12 46.4 0.3 1.8e-05 24.8 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp PF02222.22 gi|16081856|ref|NP_394253.1| - 1.4e-11 44.2 0.0 3.3e-05 23.5 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain CPSase_sm_chain PF00988.22 gi|16082556|ref|NP_394254.1| - 2.6e-37 127.5 0.0 4.7e-37 126.7 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|16082556|ref|NP_394254.1| - 2.4e-31 109.0 0.0 3.3e-31 108.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|16082556|ref|NP_394254.1| - 2.7e-07 30.6 0.3 0.0052 16.6 0.1 2.2 1 1 1 2 2 2 2 Peptidase C26 PQQ_3 PF13570.6 gi|16082556|ref|NP_394254.1| - 0.017 15.6 5.9 0.29 11.7 0.1 3.3 2 1 1 3 3 3 0 PQQ-like domain MFS_1 PF07690.16 gi|16081857|ref|NP_394255.1| - 1e-39 136.5 101.4 1.7e-33 116.0 67.8 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily SfsA PF03749.13 gi|16081858|ref|NP_394257.1| - 4.6e-32 110.8 0.0 6.1e-32 110.4 0.0 1.1 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|16081858|ref|NP_394257.1| - 5.8e-15 55.2 0.1 9.4e-15 54.5 0.1 1.4 1 0 0 1 1 1 1 SfsA N-terminal OB domain MS_channel PF00924.18 gi|16081859|ref|NP_394258.1| - 1.1e-22 80.6 5.0 1.1e-22 80.6 5.0 1.8 2 0 0 2 2 2 1 Mechanosensitive ion channel 4HBT_2 PF13279.6 gi|16082557|ref|NP_394259.1| - 6.4e-18 65.4 0.4 7.6e-18 65.2 0.4 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 gi|16082557|ref|NP_394259.1| - 3.3e-16 59.4 0.0 4.7e-16 58.9 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily Acyl-ACP_TE PF01643.17 gi|16082557|ref|NP_394259.1| - 2.6e-09 36.7 1.0 0.0012 18.2 0.0 2.0 1 1 1 2 2 2 2 Acyl-ACP thioesterase Chordopox_G2 PF05796.12 gi|16082557|ref|NP_394259.1| - 0.062 12.7 0.0 0.069 12.6 0.0 1.1 1 0 0 1 1 1 0 Chordopoxvirus protein G2 CCDC154 PF15450.6 gi|16081860|ref|NP_394260.1| - 0.00064 18.4 1.2 0.00072 18.2 1.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 154 SlyX PF04102.12 gi|16081860|ref|NP_394260.1| - 0.0032 18.0 1.8 0.34 11.6 0.8 2.2 1 1 1 2 2 2 1 SlyX ABC_tran_CTD PF16326.5 gi|16081860|ref|NP_394260.1| - 0.0045 17.2 9.9 0.0053 17.0 4.1 2.8 1 1 1 2 2 2 1 ABC transporter C-terminal domain PCRF PF03462.18 gi|16081860|ref|NP_394260.1| - 0.0095 15.8 3.6 0.011 15.6 3.6 1.1 1 0 0 1 1 1 1 PCRF domain CLZ PF16526.5 gi|16081860|ref|NP_394260.1| - 0.0097 16.2 5.3 1.5 9.2 1.9 2.4 1 1 1 2 2 2 2 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HalX PF08663.10 gi|16081860|ref|NP_394260.1| - 0.011 16.0 0.7 4.3 7.7 0.3 2.4 1 1 1 2 2 2 0 HalX domain COG2 PF06148.11 gi|16081860|ref|NP_394260.1| - 0.013 15.5 3.1 0.31 11.1 0.9 2.1 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Antigen_Bd37 PF11641.8 gi|16081860|ref|NP_394260.1| - 0.015 14.8 1.5 0.018 14.6 1.5 1.2 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein Apolipoprotein PF01442.18 gi|16081860|ref|NP_394260.1| - 0.018 14.9 4.3 0.17 11.7 2.3 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Matrilin_ccoil PF10393.9 gi|16081860|ref|NP_394260.1| - 0.019 14.8 6.3 1.6 8.7 0.1 3.2 3 2 0 3 3 2 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF148 PF02520.17 gi|16081860|ref|NP_394260.1| - 0.021 14.9 0.9 0.027 14.6 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF148 HSBP1 PF06825.12 gi|16081860|ref|NP_394260.1| - 0.023 14.6 8.7 0.036 13.9 0.5 2.7 2 1 0 2 2 2 0 Heat shock factor binding protein 1 DUF1664 PF07889.12 gi|16081860|ref|NP_394260.1| - 0.024 14.6 2.6 0.086 12.9 2.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TipAS PF07739.13 gi|16081860|ref|NP_394260.1| - 0.026 15.1 3.4 0.081 13.5 3.4 1.8 1 1 0 1 1 1 0 TipAS antibiotic-recognition domain DUF16 PF01519.16 gi|16081860|ref|NP_394260.1| - 0.027 15.0 1.9 0.054 14.0 1.9 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 Baculo_PEP_C PF04513.12 gi|16081860|ref|NP_394260.1| - 0.028 14.5 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 gi|16081860|ref|NP_394260.1| - 0.033 14.6 2.0 4.7 7.7 0.1 2.1 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Carbpep_Y_N PF05388.11 gi|16081860|ref|NP_394260.1| - 0.035 14.6 3.5 0.04 14.5 3.5 1.1 1 0 0 1 1 1 0 Carboxypeptidase Y pro-peptide Fib_alpha PF08702.10 gi|16081860|ref|NP_394260.1| - 0.039 14.2 2.1 0.061 13.5 2.1 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FlxA PF14282.6 gi|16081860|ref|NP_394260.1| - 0.049 13.6 3.7 0.7 9.9 1.0 2.1 1 1 0 1 1 1 0 FlxA-like protein Spc7 PF08317.11 gi|16081860|ref|NP_394260.1| - 0.05 12.5 5.5 0.059 12.2 5.5 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 gi|16081860|ref|NP_394260.1| - 0.054 13.0 1.6 0.068 12.7 1.6 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein PIN_8 PF18476.1 gi|16081860|ref|NP_394260.1| - 0.067 13.1 1.9 0.077 12.8 1.9 1.1 1 0 0 1 1 1 0 PIN like domain Baculo_p24 PF05073.12 gi|16081860|ref|NP_394260.1| - 0.076 12.8 0.4 0.085 12.6 0.4 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Erythro-docking PF09277.11 gi|16081860|ref|NP_394260.1| - 0.091 12.7 0.7 0.53 10.2 0.1 2.3 1 1 1 2 2 2 0 Erythronolide synthase, docking AAA_13 PF13166.6 gi|16081860|ref|NP_394260.1| - 0.13 10.9 4.0 0.13 10.8 4.0 1.1 1 0 0 1 1 1 0 AAA domain FapA PF03961.13 gi|16081860|ref|NP_394260.1| - 0.14 10.8 3.7 0.15 10.7 3.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Prefoldin_2 PF01920.20 gi|16081860|ref|NP_394260.1| - 0.15 12.0 6.5 1.2 9.1 2.2 2.3 1 1 1 2 2 2 0 Prefoldin subunit SPECT1 PF18680.1 gi|16081860|ref|NP_394260.1| - 0.16 11.7 4.2 0.14 11.8 2.7 1.7 1 1 1 2 2 2 0 Plasmodium host cell traversal SPECT1 OmpH PF03938.14 gi|16081860|ref|NP_394260.1| - 0.16 12.3 7.8 0.59 10.5 7.8 1.8 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Halo_GVPC PF05465.13 gi|16081860|ref|NP_394260.1| - 0.16 12.3 0.2 36 4.8 0.0 2.8 3 0 0 3 3 3 0 Halobacterial gas vesicle protein C (GVPC) repeat YojJ PF10372.9 gi|16081860|ref|NP_394260.1| - 0.17 12.0 4.2 2.1 8.5 0.6 2.3 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus XhlA PF10779.9 gi|16081860|ref|NP_394260.1| - 0.19 11.9 6.9 6.8 7.0 2.1 2.9 1 1 1 2 2 2 0 Haemolysin XhlA Prominin PF05478.11 gi|16081860|ref|NP_394260.1| - 0.2 9.6 1.3 0.23 9.4 1.3 1.0 1 0 0 1 1 1 0 Prominin DASH_Dam1 PF08653.10 gi|16081860|ref|NP_394260.1| - 0.21 11.4 1.9 9.6 6.1 0.1 2.4 2 1 0 2 2 2 0 DASH complex subunit Dam1 FlaC_arch PF05377.11 gi|16081860|ref|NP_394260.1| - 0.27 11.7 4.1 10 6.6 2.4 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) YabA PF06156.13 gi|16081860|ref|NP_394260.1| - 0.27 11.9 4.6 5.3 7.7 1.9 2.2 1 1 1 2 2 2 0 Initiation control protein YabA MtrB PF05440.12 gi|16081860|ref|NP_394260.1| - 0.31 11.5 2.2 17 5.9 0.2 2.1 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF4140 PF13600.6 gi|16081860|ref|NP_394260.1| - 0.44 11.0 2.9 2.1 8.8 0.9 2.1 1 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Osmo_CC PF08946.10 gi|16081860|ref|NP_394260.1| - 0.44 10.8 4.8 13 6.1 1.4 3.1 1 1 1 2 2 2 0 Osmosensory transporter coiled coil Cauli_DNA-bind PF03310.13 gi|16081860|ref|NP_394260.1| - 0.45 10.6 4.1 0.45 10.6 1.0 2.0 1 1 1 2 2 2 0 Caulimovirus DNA-binding protein Vps51 PF08700.11 gi|16081860|ref|NP_394260.1| - 0.47 10.6 4.6 3.3 7.9 0.7 2.4 2 1 0 2 2 2 0 Vps51/Vps67 LPP PF04728.13 gi|16081860|ref|NP_394260.1| - 0.66 10.4 8.7 9 6.8 2.8 2.5 1 1 1 2 2 2 0 Lipoprotein leucine-zipper YtxH PF12732.7 gi|16081860|ref|NP_394260.1| - 1.2 9.7 8.8 0.62 10.6 2.3 2.3 1 1 1 2 2 2 0 YtxH-like protein MCM PF00493.23 gi|16081861|ref|NP_394261.1| - 8.1e-96 319.4 0.1 1.4e-95 318.7 0.1 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|16081861|ref|NP_394261.1| - 1.5e-31 108.9 0.0 2.6e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|16081861|ref|NP_394261.1| - 1.7e-25 89.2 2.2 6e-25 87.5 2.2 2.0 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 gi|16081861|ref|NP_394261.1| - 8.7e-10 38.3 0.1 1.3e-06 28.0 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|16081861|ref|NP_394261.1| - 1.3e-05 25.2 0.0 7.4e-05 22.8 0.0 2.4 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|16081861|ref|NP_394261.1| - 2.1e-05 24.4 0.0 7.2e-05 22.7 0.0 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|16081861|ref|NP_394261.1| - 0.00031 20.5 0.1 0.0011 18.8 0.1 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain MCM_N PF14551.6 gi|16081861|ref|NP_394261.1| - 0.00033 21.2 0.4 0.001 19.6 0.4 1.8 1 0 0 1 1 1 1 MCM N-terminal domain TBPIP PF07106.13 gi|16081861|ref|NP_394261.1| - 0.024 14.6 0.5 0.076 13.0 0.5 1.9 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain DUF424 PF04242.13 gi|16081862|ref|NP_394262.1| - 1.3e-26 92.7 0.2 1.4e-26 92.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) Ubie_methyltran PF01209.18 gi|16081863|ref|NP_394263.1| - 4.5e-39 134.2 0.0 5.8e-39 133.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|16081863|ref|NP_394263.1| - 3e-19 69.5 0.0 7.2e-19 68.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16081863|ref|NP_394263.1| - 1.3e-15 57.8 0.0 3.1e-15 56.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16081863|ref|NP_394263.1| - 5.4e-11 42.6 0.0 1.2e-10 41.5 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16081863|ref|NP_394263.1| - 3.5e-09 36.6 0.0 7.8e-09 35.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081863|ref|NP_394263.1| - 5.2e-08 33.5 0.0 1.4e-07 32.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|16081863|ref|NP_394263.1| - 6.8e-05 22.3 0.3 0.0017 17.7 0.2 2.6 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_29 PF03141.16 gi|16081863|ref|NP_394263.1| - 0.0056 15.3 0.0 0.0078 14.8 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase FtsJ PF01728.19 gi|16081863|ref|NP_394263.1| - 0.045 13.8 0.0 1.1 9.3 0.0 2.2 1 1 0 2 2 2 0 FtsJ-like methyltransferase Methyltransf_PK PF05891.12 gi|16081863|ref|NP_394263.1| - 0.054 13.0 0.0 0.11 12.0 0.0 1.5 1 1 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Trp_syntA PF00290.20 gi|16082558|ref|NP_394264.1| - 8e-14 51.1 0.0 9.8e-14 50.8 0.0 1.1 1 0 0 1 1 1 1 Tryptophan synthase alpha chain Glycos_transf_3 PF00591.21 gi|16081864|ref|NP_394265.1| - 1.1e-53 182.5 0.0 1.3e-53 182.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|16081864|ref|NP_394265.1| - 9.6e-07 28.6 0.3 3.1e-06 26.9 0.3 1.9 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PRAI PF00697.22 gi|16082559|ref|NP_394266.1| - 6.7e-17 61.9 0.0 2.1e-16 60.3 0.0 1.7 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Chorismate_bind PF00425.18 gi|16082560|ref|NP_394267.1| - 1.5e-67 227.9 0.0 1.9e-67 227.6 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme GATase PF00117.28 gi|16081865|ref|NP_394268.1| - 1.6e-35 122.7 0.0 1.7e-35 122.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|16081865|ref|NP_394268.1| - 2.6e-05 24.1 0.1 0.00018 21.3 0.1 2.0 1 1 0 1 1 1 1 Peptidase C26 GATase_5 PF13507.6 gi|16081865|ref|NP_394268.1| - 0.068 12.3 0.1 3.9 6.5 0.1 2.1 1 1 1 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain IGPS PF00218.21 gi|16081866|ref|NP_394269.1| - 1.7e-31 109.3 0.0 2.1e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase Aldedh PF00171.22 gi|16081867|ref|NP_394270.1| - 7.2e-162 539.1 0.0 8.2e-162 538.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|16081867|ref|NP_394270.1| - 0.00025 20.2 0.0 0.00046 19.3 0.0 1.3 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF2884 PF11101.8 gi|16081867|ref|NP_394270.1| - 0.15 11.5 0.1 0.28 10.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) AFOR_C PF01314.18 gi|16081868|ref|NP_394271.1| - 1.3e-134 449.0 0.0 1.6e-134 448.7 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|16081868|ref|NP_394271.1| - 3e-84 281.8 0.6 7.4e-84 280.5 0.4 1.8 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain SHMT PF00464.19 gi|16081869|ref|NP_394272.1| - 2.2e-47 161.6 0.5 4.3e-47 160.6 0.4 1.3 1 1 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 gi|16081869|ref|NP_394272.1| - 3.8e-10 39.5 0.2 5e-10 39.1 0.2 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|16081869|ref|NP_394272.1| - 0.00065 19.1 0.1 0.00097 18.5 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family CBS PF00571.28 gi|16081870|ref|NP_394273.1| - 2.9e-44 149.3 9.6 8.2e-14 51.8 0.1 4.3 4 0 0 4 4 4 4 CBS domain DUF4294 PF14127.6 gi|16081870|ref|NP_394273.1| - 0.11 12.5 1.4 0.74 9.7 1.2 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4294) PmbA_TldD PF01523.16 gi|16081871|ref|NP_394274.1| - 4.4e-40 138.3 2.5 5.4e-40 138.0 2.5 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|16081872|ref|NP_394275.1| - 3.8e-34 118.8 0.2 5.5e-34 118.3 0.2 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Peptidase_M1 PF01433.20 gi|16081873|ref|NP_394276.1| - 6.5e-80 267.8 0.6 1e-79 267.1 0.6 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 gi|16081873|ref|NP_394276.1| - 2.2e-35 122.5 0.0 6e-35 121.1 0.0 1.7 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain ERAP1_C PF11838.8 gi|16081873|ref|NP_394276.1| - 3.9e-25 89.1 0.0 5.4e-25 88.6 0.0 1.2 1 0 0 1 1 1 1 ERAP1-like C-terminal domain TPP_enzyme_N PF02776.18 gi|16081874|ref|NP_394277.1| - 4.2e-44 150.2 0.0 1.9e-42 144.8 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|16081874|ref|NP_394277.1| - 4.2e-41 140.3 0.2 8.5e-41 139.3 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|16081874|ref|NP_394277.1| - 1e-29 103.0 0.0 1.6e-29 102.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|16081874|ref|NP_394277.1| - 2.5e-05 24.1 0.0 4.6e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Acetyltransf_1 PF00583.25 gi|16081875|ref|NP_394278.1| - 5.9e-14 52.3 0.0 7.6e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16081875|ref|NP_394278.1| - 9.6e-12 44.9 0.0 1.4e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16081875|ref|NP_394278.1| - 2.1e-10 40.9 0.0 3.8e-10 40.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16081875|ref|NP_394278.1| - 1.2e-09 38.5 0.0 1.5e-09 38.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081875|ref|NP_394278.1| - 7.8e-05 22.6 0.0 0.00015 21.7 0.0 1.5 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|16081875|ref|NP_394278.1| - 0.0004 20.5 0.0 0.00099 19.2 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|16081875|ref|NP_394278.1| - 0.0017 18.4 0.0 0.0026 17.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase PanZ PF12568.8 gi|16081875|ref|NP_394278.1| - 0.0031 17.2 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 gi|16081875|ref|NP_394278.1| - 0.033 14.2 0.0 0.065 13.2 0.0 1.5 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase CoA_trans PF01144.23 gi|16081876|ref|NP_394279.1| - 1.3e-34 119.5 0.1 2.5e-32 112.0 0.0 2.3 2 0 0 2 2 2 2 Coenzyme A transferase Mal_decarbox_Al PF16957.5 gi|16081876|ref|NP_394279.1| - 9.6e-06 24.2 0.0 1.6e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Malonate decarboxylase, alpha subunit, transporter AcetylCoA_hydro PF02550.15 gi|16081876|ref|NP_394279.1| - 0.0014 18.6 0.1 1.7 8.6 0.0 3.5 3 1 0 3 3 3 2 Acetyl-CoA hydrolase/transferase N-terminal domain Citrate_synt PF00285.21 gi|16081877|ref|NP_394280.1| - 1.8e-98 329.9 0.0 2.1e-98 329.7 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain CoA_trans PF01144.23 gi|16081878|ref|NP_394281.1| - 1.2e-33 116.3 0.5 7.9e-31 107.1 0.0 2.7 3 0 0 3 3 3 2 Coenzyme A transferase Mal_decarbox_Al PF16957.5 gi|16081878|ref|NP_394281.1| - 0.015 13.7 0.1 0.028 12.7 0.0 1.4 2 0 0 2 2 2 0 Malonate decarboxylase, alpha subunit, transporter Acetyltransf_1 PF00583.25 gi|16081879|ref|NP_394282.1| - 4.7e-10 39.7 0.0 9.6e-10 38.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16081879|ref|NP_394282.1| - 2.6e-05 24.1 0.0 4.8e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16081879|ref|NP_394282.1| - 0.00016 21.6 0.0 0.00028 20.8 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 gi|16081879|ref|NP_394282.1| - 0.00029 21.2 0.0 0.00056 20.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|16081879|ref|NP_394282.1| - 0.0027 18.4 0.0 0.0041 17.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|16081879|ref|NP_394282.1| - 0.0042 16.7 0.0 0.0067 16.0 0.0 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_6 PF13480.7 gi|16081879|ref|NP_394282.1| - 0.011 15.9 0.0 0.022 14.9 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.10 gi|16081879|ref|NP_394282.1| - 0.16 12.2 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region adh_short_C2 PF13561.6 gi|16081880|ref|NP_394283.1| - 2.9e-47 161.2 0.0 3.6e-47 160.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081880|ref|NP_394283.1| - 5e-36 124.0 0.0 6.4e-36 123.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|16081880|ref|NP_394283.1| - 0.0009 19.2 0.0 0.0091 15.9 0.0 2.0 1 1 1 2 2 2 1 KR domain NAD_binding_10 PF13460.6 gi|16081880|ref|NP_394283.1| - 0.0032 17.4 0.0 0.0056 16.6 0.0 1.4 1 1 0 1 1 1 1 NAD(P)H-binding NAD_Gly3P_dh_N PF01210.23 gi|16081880|ref|NP_394283.1| - 0.011 15.7 0.0 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|16081880|ref|NP_394283.1| - 0.027 14.3 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|16081880|ref|NP_394283.1| - 0.14 11.4 0.0 4.1 6.7 0.0 2.4 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GatB_Yqey PF02637.18 gi|16081880|ref|NP_394283.1| - 0.17 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 GatB domain His_Phos_1 PF00300.22 gi|16081881|ref|NP_394284.1| - 4e-31 108.2 0.0 2.2e-30 105.8 0.0 1.8 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DAO_C PF16901.5 gi|16081881|ref|NP_394284.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase Chorismate_synt PF01264.21 gi|16081882|ref|NP_394285.1| - 1.7e-121 404.9 0.0 1.9e-121 404.8 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase ROK PF00480.20 gi|16081883|ref|NP_394286.1| - 3.3e-66 223.8 0.0 4e-66 223.5 0.0 1.0 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 gi|16081883|ref|NP_394286.1| - 0.0024 17.4 0.0 0.57 9.6 0.0 2.2 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family AlbA_2 PF04326.14 gi|16081884|ref|NP_394287.1| - 1.5e-12 48.0 0.1 3.1e-12 46.9 0.1 1.6 1 0 0 1 1 1 1 Putative DNA-binding domain She9_MDM33 PF05546.11 gi|16081885|ref|NP_394288.1| - 0.0013 18.6 9.0 0.0013 18.6 9.0 2.6 3 0 0 3 3 3 1 She9 / Mdm33 family Endonuc_subdom PF09062.10 gi|16081885|ref|NP_394288.1| - 0.074 13.9 0.5 0.18 12.6 0.5 1.7 1 0 0 1 1 1 0 PI-PfuI Endonuclease subdomain RNA_pol_L_2 PF13656.6 gi|16081885|ref|NP_394288.1| - 0.68 9.7 0.1 0.68 9.7 0.1 2.8 3 1 0 3 3 3 0 RNA polymerase Rpb3/Rpb11 dimerisation domain PspA_IM30 PF04012.12 gi|16081885|ref|NP_394288.1| - 1.9 8.0 17.5 0.073 12.6 7.3 3.3 4 1 0 4 4 4 0 PspA/IM30 family SLX9 PF15341.6 gi|16081885|ref|NP_394288.1| - 2.2 8.7 12.4 1.2 9.5 0.2 2.8 3 0 0 3 3 3 0 Ribosome biogenesis protein SLX9 DUF1840 PF08895.11 gi|16081885|ref|NP_394288.1| - 3.5 8.0 8.7 2.7 8.4 3.4 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1840) TPR_MLP1_2 PF07926.12 gi|16081885|ref|NP_394288.1| - 4.3 7.4 22.0 0.038 14.1 9.1 3.2 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein OmpH PF03938.14 gi|16081885|ref|NP_394288.1| - 4.8 7.5 29.3 0.48 10.7 13.9 3.2 2 1 1 3 3 3 0 Outer membrane protein (OmpH-like) PspB PF06667.12 gi|16081885|ref|NP_394288.1| - 6.2 7.0 9.3 8.8 6.5 0.0 3.7 4 0 0 4 4 4 0 Phage shock protein B Exonuc_VII_L PF02601.15 gi|16081885|ref|NP_394288.1| - 7.6 6.0 14.1 25 4.3 13.9 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit ThaI PF15514.6 gi|16081886|ref|NP_394289.1| - 7.4e-123 407.7 0.7 8.3e-123 407.6 0.7 1.0 1 0 0 1 1 1 1 Restriction endonuclease ThaI N6_N4_Mtase PF01555.18 gi|16081887|ref|NP_394290.1| - 4.1e-45 154.3 0.0 5.4e-45 153.9 0.0 1.1 1 0 0 1 1 1 1 DNA methylase UPF0020 PF01170.18 gi|16081887|ref|NP_394290.1| - 0.00077 19.2 0.0 0.066 12.9 0.0 2.5 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|16081887|ref|NP_394290.1| - 0.0035 18.0 0.0 0.26 12.0 0.0 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16081887|ref|NP_394290.1| - 0.0039 17.8 0.0 1.4 9.6 0.0 2.6 2 1 0 2 2 2 1 Methyltransferase domain MethyltransfD12 PF02086.15 gi|16081887|ref|NP_394290.1| - 0.0084 15.8 0.7 0.19 11.4 0.0 2.4 3 0 0 3 3 3 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_31 PF13847.6 gi|16081887|ref|NP_394290.1| - 0.013 15.2 0.0 0.25 11.1 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain PrmA PF06325.13 gi|16081887|ref|NP_394290.1| - 0.021 14.2 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|16081887|ref|NP_394290.1| - 0.027 14.1 0.0 1.3 8.6 0.0 2.6 3 0 0 3 3 3 0 Conserved hypothetical protein 95 Methyltransf_12 PF08242.12 gi|16081887|ref|NP_394290.1| - 0.15 12.8 0.0 19 6.0 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain Hydrolase_4 PF12146.8 gi|16081888|ref|NP_394291.1| - 9.5e-21 74.1 0.0 1.9e-19 69.9 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|16081888|ref|NP_394291.1| - 6.4e-20 71.9 0.0 3.2e-19 69.6 0.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|16081888|ref|NP_394291.1| - 1.8e-12 48.3 0.0 2.3e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|16081888|ref|NP_394291.1| - 0.00016 21.4 0.0 0.0022 17.6 0.0 2.2 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Peptidase_S9 PF00326.21 gi|16081888|ref|NP_394291.1| - 0.00019 21.0 0.1 0.002 17.6 0.1 2.2 1 1 1 2 2 2 1 Prolyl oligopeptidase family DUF1057 PF06342.12 gi|16081888|ref|NP_394291.1| - 0.00052 19.2 0.0 0.00082 18.5 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) Abhydrolase_2 PF02230.16 gi|16081888|ref|NP_394291.1| - 0.0006 19.7 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 gi|16081888|ref|NP_394291.1| - 0.0026 17.7 0.0 0.0063 16.4 0.0 1.7 2 0 0 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 gi|16081888|ref|NP_394291.1| - 0.0027 17.3 0.0 1.4 8.4 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family AXE1 PF05448.12 gi|16081888|ref|NP_394291.1| - 0.0058 15.3 0.2 1.2 7.7 0.0 2.7 2 1 1 3 3 3 1 Acetyl xylan esterase (AXE1) DUF1749 PF08538.10 gi|16081888|ref|NP_394291.1| - 0.11 11.5 0.0 0.22 10.6 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1749) SCP2 PF02036.17 gi|16081889|ref|NP_394292.1| - 3.4e-16 59.6 0.0 4.3e-16 59.3 0.0 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Fe-ADH PF00465.19 gi|16082561|ref|NP_394293.1| - 7.2e-83 278.4 0.0 8.1e-83 278.2 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|16082561|ref|NP_394293.1| - 5.2e-18 65.7 0.6 5.1e-09 36.2 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Reprolysin_2 PF13574.6 gi|16082561|ref|NP_394293.1| - 0.13 12.1 0.8 0.27 11.1 0.8 1.5 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DHQ_synthase PF01761.20 gi|16082561|ref|NP_394293.1| - 0.13 11.4 0.0 7 5.7 0.0 2.2 2 0 0 2 2 2 0 3-dehydroquinate synthase AFOR_C PF01314.18 gi|16081890|ref|NP_394294.1| - 7.2e-82 275.4 0.0 9.7e-82 275.0 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|16081890|ref|NP_394294.1| - 1.7e-71 240.2 0.0 2.7e-71 239.6 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain DEAD PF00270.29 gi|16081891|ref|NP_394295.1| - 1.8e-25 89.7 0.0 9.4e-24 84.1 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|16081891|ref|NP_394295.1| - 4.9e-11 43.0 0.1 2.5e-10 40.7 0.1 2.2 1 1 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|16081891|ref|NP_394295.1| - 6.2e-11 42.7 0.1 2e-10 41.1 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix domain ResIII PF04851.15 gi|16081891|ref|NP_394295.1| - 4.4e-09 36.6 0.0 1.1e-08 35.3 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DNA_pol_lambd_f PF10391.9 gi|16081891|ref|NP_394295.1| - 6e-06 26.0 0.0 1.9e-05 24.4 0.0 1.8 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_2 PF12826.7 gi|16081891|ref|NP_394295.1| - 0.00015 21.8 0.0 0.047 13.8 0.0 3.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|16081891|ref|NP_394295.1| - 0.058 13.6 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Pathogenicity locus HHH PF00633.23 gi|16081891|ref|NP_394295.1| - 0.13 12.2 0.0 0.47 10.4 0.0 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif Met_10 PF02475.16 gi|16081892|ref|NP_394296.1| - 8.3e-51 172.6 0.1 1.2e-50 172.0 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|16081892|ref|NP_394296.1| - 2.3e-12 46.6 0.0 6.2e-12 45.2 0.0 1.7 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain MTS PF05175.14 gi|16081892|ref|NP_394296.1| - 1e-06 28.4 0.0 1.8e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.16 gi|16081892|ref|NP_394296.1| - 0.00016 21.0 0.1 0.00027 20.3 0.1 1.3 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Cons_hypoth95 PF03602.15 gi|16081892|ref|NP_394296.1| - 0.00032 20.4 0.0 0.00054 19.7 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 gi|16081892|ref|NP_394296.1| - 0.0011 19.7 0.0 0.003 18.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|16081892|ref|NP_394296.1| - 0.0018 17.7 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltr_RsmB-F PF01189.17 gi|16081892|ref|NP_394296.1| - 0.003 17.2 0.0 0.005 16.5 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F ADH_zinc_N PF00107.26 gi|16081892|ref|NP_394296.1| - 0.022 14.8 0.0 0.082 12.9 0.0 2.0 2 0 0 2 2 2 0 Zinc-binding dehydrogenase MethyltransfD12 PF02086.15 gi|16081892|ref|NP_394296.1| - 0.029 14.1 0.0 0.064 12.9 0.0 1.5 2 0 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_18 PF12847.7 gi|16081892|ref|NP_394296.1| - 0.034 14.1 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|16081892|ref|NP_394296.1| - 0.08 12.5 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Pyr_redox_2 PF07992.14 gi|16081893|ref|NP_394297.1| - 1.2e-57 195.4 5.4 1.6e-57 195.0 5.4 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16081893|ref|NP_394297.1| - 4.6e-24 84.8 3.8 1.1e-16 61.2 0.1 3.5 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|16081893|ref|NP_394297.1| - 8.7e-22 77.7 0.5 5.1e-16 58.8 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|16081893|ref|NP_394297.1| - 1.2e-19 70.6 0.0 4.7e-19 68.7 0.0 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FAD_binding_2 PF00890.24 gi|16081893|ref|NP_394297.1| - 5.1e-11 42.3 4.8 4.6e-05 22.7 0.6 3.2 3 0 0 3 3 3 3 FAD binding domain HI0933_like PF03486.14 gi|16081893|ref|NP_394297.1| - 1.3e-09 37.3 6.4 0.00017 20.5 1.3 4.0 5 0 0 5 5 5 3 HI0933-like protein NAD_binding_8 PF13450.6 gi|16081893|ref|NP_394297.1| - 4.4e-08 33.2 2.5 0.00091 19.4 0.2 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|16081893|ref|NP_394297.1| - 5.5e-08 32.8 5.3 0.00077 19.1 0.5 3.2 2 1 1 3 3 3 3 FAD dependent oxidoreductase GIDA PF01134.22 gi|16081893|ref|NP_394297.1| - 1e-06 28.2 5.7 0.0098 15.0 1.3 3.9 4 0 0 4 4 4 2 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|16081893|ref|NP_394297.1| - 4.9e-06 25.8 1.6 0.0014 17.8 0.2 2.4 2 0 0 2 2 2 2 Lycopene cyclase protein K_oxygenase PF13434.6 gi|16081893|ref|NP_394297.1| - 8.7e-06 25.1 0.2 9.8e-05 21.6 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 gi|16081893|ref|NP_394297.1| - 1.1e-05 25.9 0.9 0.015 15.7 0.1 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|16081893|ref|NP_394297.1| - 1.3e-05 24.6 7.7 0.025 13.9 0.5 2.6 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|16081893|ref|NP_394297.1| - 2.6e-05 24.4 0.1 0.055 13.7 0.0 2.5 2 0 0 2 2 2 2 TrkA-N domain Trp_halogenase PF04820.14 gi|16081893|ref|NP_394297.1| - 8.5e-05 21.6 3.9 0.0011 17.9 0.5 2.8 3 0 0 3 3 3 1 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|16081893|ref|NP_394297.1| - 0.00036 19.9 1.1 0.01 15.1 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 gi|16081893|ref|NP_394297.1| - 0.00052 20.0 1.7 0.9 9.5 0.0 3.8 4 0 0 4 4 4 1 FAD-NAD(P)-binding FAD_oxidored PF12831.7 gi|16081893|ref|NP_394297.1| - 0.0018 17.7 1.9 0.0018 17.7 1.9 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase DFP PF04127.15 gi|16081893|ref|NP_394297.1| - 0.0064 16.3 0.1 0.017 14.9 0.0 1.7 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein NAD_Gly3P_dh_N PF01210.23 gi|16081893|ref|NP_394297.1| - 0.0067 16.4 0.2 0.086 12.8 0.0 2.3 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 gi|16081893|ref|NP_394297.1| - 0.0099 15.8 1.1 0.022 14.7 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|16081893|ref|NP_394297.1| - 0.014 15.9 3.6 0.25 11.9 0.6 3.0 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Thi4 PF01946.17 gi|16081893|ref|NP_394297.1| - 0.017 14.3 1.6 0.11 11.7 0.2 2.4 2 0 0 2 2 2 0 Thi4 family ApbA PF02558.16 gi|16081893|ref|NP_394297.1| - 0.08 12.6 0.4 0.36 10.5 0.0 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 gi|16081893|ref|NP_394297.1| - 0.35 10.2 1.3 0.79 9.1 0.0 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEAD PF00270.29 gi|16081894|ref|NP_394298.1| - 1.4e-32 112.8 0.0 7e-32 110.6 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|16081894|ref|NP_394298.1| - 3.8e-19 69.1 0.0 4.5e-18 65.6 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD_assoc PF08494.11 gi|16081894|ref|NP_394298.1| - 1.4e-14 54.4 0.2 4.1e-13 49.6 0.0 2.5 2 0 0 2 2 2 1 DEAD/H associated ResIII PF04851.15 gi|16081894|ref|NP_394298.1| - 3.3e-08 33.7 0.0 8.3e-08 32.4 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit zf-RRN7 PF11781.8 gi|16081894|ref|NP_394298.1| - 0.02 14.5 1.0 1 9.1 0.0 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Rota_NSP4 PF01452.16 gi|16081894|ref|NP_394298.1| - 0.093 12.4 0.1 0.23 11.1 0.1 1.6 1 0 0 1 1 1 0 Rotavirus non structural protein AAA_19 PF13245.6 gi|16081894|ref|NP_394298.1| - 0.14 12.5 0.0 0.36 11.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain DUF3701 PF12482.8 gi|16081894|ref|NP_394298.1| - 0.14 12.3 0.0 0.51 10.4 0.0 1.9 2 0 0 2 2 2 0 Phage integrase protein Peptidase_M50 PF02163.22 gi|16081895|ref|NP_394299.1| - 0.00013 21.4 0.8 0.00034 19.9 0.4 1.8 1 1 0 1 1 1 1 Peptidase family M50 UvrD_C_2 PF13538.6 gi|16081895|ref|NP_394299.1| - 0.13 12.1 0.0 0.89 9.4 0.0 2.2 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain Adeno_shaft PF00608.17 gi|16081895|ref|NP_394299.1| - 0.15 11.9 0.5 1e+02 2.9 0.0 3.3 3 0 0 3 3 3 0 Adenoviral fibre protein (repeat/shaft region) AAA PF00004.29 gi|16081896|ref|NP_394300.1| - 1.5e-101 336.1 0.0 1.6e-50 170.9 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|16081896|ref|NP_394300.1| - 2.7e-31 107.1 0.0 3.7e-18 65.0 0.0 2.6 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|16081896|ref|NP_394300.1| - 4.2e-25 87.8 2.9 1.7e-24 85.8 2.9 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|16081896|ref|NP_394300.1| - 2.9e-18 66.6 0.1 1.6e-07 31.6 0.0 3.1 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|16081896|ref|NP_394300.1| - 5.9e-16 58.6 0.0 8.5e-08 32.1 0.0 2.7 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|16081896|ref|NP_394300.1| - 2.3e-13 50.9 0.0 5.5e-06 26.9 0.0 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_14 PF13173.6 gi|16081896|ref|NP_394300.1| - 1.2e-11 44.8 0.0 1.9e-05 24.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|16081896|ref|NP_394300.1| - 1.5e-11 44.5 0.9 0.00011 22.2 0.1 4.3 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|16081896|ref|NP_394300.1| - 2.3e-10 40.9 0.7 0.0094 16.2 0.0 4.2 2 2 2 4 4 4 2 AAA domain TIP49 PF06068.13 gi|16081896|ref|NP_394300.1| - 1.9e-09 37.2 1.4 0.0012 18.1 0.0 3.1 3 0 0 3 3 3 2 TIP49 P-loop domain CDC48_2 PF02933.17 gi|16081896|ref|NP_394300.1| - 6.2e-09 35.5 0.1 1.4e-08 34.3 0.1 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_33 PF13671.6 gi|16081896|ref|NP_394300.1| - 1.7e-08 34.7 0.0 0.0012 19.1 0.0 2.6 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|16081896|ref|NP_394300.1| - 1.1e-07 31.7 0.0 0.015 15.1 0.0 2.7 3 0 0 3 3 2 2 IstB-like ATP binding protein AAA_18 PF13238.6 gi|16081896|ref|NP_394300.1| - 1.9e-07 31.7 0.1 0.023 15.3 0.0 3.5 3 0 0 3 3 3 2 AAA domain RNA_helicase PF00910.22 gi|16081896|ref|NP_394300.1| - 8.7e-07 29.3 0.0 0.087 13.2 0.0 2.9 2 0 0 2 2 2 2 RNA helicase AAA_25 PF13481.6 gi|16081896|ref|NP_394300.1| - 1.5e-06 27.9 4.0 2 7.9 0.1 4.5 3 1 1 4 4 4 2 AAA domain AAA_24 PF13479.6 gi|16081896|ref|NP_394300.1| - 2.6e-06 27.3 0.0 0.11 12.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|16081896|ref|NP_394300.1| - 4.1e-06 26.3 0.1 0.12 11.8 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|16081896|ref|NP_394300.1| - 7.8e-06 25.7 0.1 0.14 11.8 0.0 3.8 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.6 gi|16081896|ref|NP_394300.1| - 1.6e-05 25.2 0.0 0.039 14.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.11 gi|16081896|ref|NP_394300.1| - 2.5e-05 24.2 0.0 0.17 11.7 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|16081896|ref|NP_394300.1| - 4.3e-05 23.5 0.0 0.19 11.8 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|16081896|ref|NP_394300.1| - 4.7e-05 23.9 0.1 0.09 13.3 0.0 2.7 2 0 0 2 2 2 1 ABC transporter DUF2075 PF09848.9 gi|16081896|ref|NP_394300.1| - 5.5e-05 22.6 0.0 0.0054 16.0 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|16081896|ref|NP_394300.1| - 6.2e-05 22.6 0.0 0.37 10.3 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_17 PF13207.6 gi|16081896|ref|NP_394300.1| - 0.00013 22.4 0.0 0.71 10.3 0.0 3.0 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|16081896|ref|NP_394300.1| - 0.00031 20.7 1.2 1.4 8.8 0.1 3.6 2 2 1 3 3 3 2 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 gi|16081896|ref|NP_394300.1| - 0.00043 19.6 0.1 0.2 10.9 0.0 2.5 2 0 0 2 2 2 1 Zeta toxin DUF815 PF05673.13 gi|16081896|ref|NP_394300.1| - 0.00054 19.2 0.0 0.64 9.1 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NB-ARC PF00931.22 gi|16081896|ref|NP_394300.1| - 0.00067 18.9 0.0 1.4 8.0 0.0 2.9 2 0 0 2 2 2 2 NB-ARC domain ATPase PF06745.13 gi|16081896|ref|NP_394300.1| - 0.00072 19.0 5.1 3 7.1 0.0 4.2 3 2 1 5 5 4 1 KaiC NACHT PF05729.12 gi|16081896|ref|NP_394300.1| - 0.00081 19.3 0.1 1.8 8.4 0.0 3.4 4 0 0 4 4 3 1 NACHT domain Bac_DnaA PF00308.18 gi|16081896|ref|NP_394300.1| - 0.00086 19.2 0.0 0.45 10.3 0.0 3.0 2 2 0 2 2 2 1 Bacterial dnaA protein Vps4_C PF09336.10 gi|16081896|ref|NP_394300.1| - 0.00091 19.2 0.9 0.52 10.4 0.1 3.1 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain PhoH PF02562.16 gi|16081896|ref|NP_394300.1| - 0.0033 16.9 3.1 0.55 9.7 0.1 3.2 3 0 0 3 3 3 1 PhoH-like protein Parvo_NS1 PF01057.17 gi|16081896|ref|NP_394300.1| - 0.0042 16.2 0.1 0.55 9.3 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_30 PF13604.6 gi|16081896|ref|NP_394300.1| - 0.0045 16.7 0.1 1.3 8.7 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|16081896|ref|NP_394300.1| - 0.0061 16.4 0.0 2.6 7.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain Guanylate_kin PF00625.21 gi|16081896|ref|NP_394300.1| - 0.007 16.1 0.5 44 3.7 0.0 4.5 2 2 2 4 4 4 0 Guanylate kinase AAA_19 PF13245.6 gi|16081896|ref|NP_394300.1| - 0.007 16.7 0.7 2.8 8.3 0.2 2.8 2 1 1 3 3 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|16081896|ref|NP_394300.1| - 0.0085 16.2 0.0 1 9.5 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain NTPase_1 PF03266.15 gi|16081896|ref|NP_394300.1| - 0.015 15.2 3.4 4.8 7.1 0.0 4.0 3 1 1 4 4 4 0 NTPase Cytidylate_kin PF02224.18 gi|16081896|ref|NP_394300.1| - 0.025 14.3 0.1 2.1 8.0 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase SKI PF01202.22 gi|16081896|ref|NP_394300.1| - 0.027 14.6 0.0 8.8 6.4 0.0 2.7 2 0 0 2 2 2 0 Shikimate kinase DAP3 PF10236.9 gi|16081896|ref|NP_394300.1| - 0.053 12.7 0.0 3.5 6.7 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Cytidylate_kin2 PF13189.6 gi|16081896|ref|NP_394300.1| - 0.075 13.2 0.0 2 8.5 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase-like family IPT PF01745.16 gi|16081896|ref|NP_394300.1| - 0.075 12.4 0.1 7.2 5.9 0.0 2.3 2 0 0 2 2 2 0 Isopentenyl transferase Hydin_ADK PF17213.3 gi|16081896|ref|NP_394300.1| - 0.076 13.3 0.0 1.3 9.3 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Viral_helicase1 PF01443.18 gi|16081896|ref|NP_394300.1| - 0.085 12.6 0.0 6.7 6.4 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AFG1_ATPase PF03969.16 gi|16081896|ref|NP_394300.1| - 0.19 10.6 0.1 20 4.0 0.0 2.6 3 0 0 3 3 3 0 AFG1-like ATPase ADH_N PF08240.12 gi|16081897|ref|NP_394301.1| - 4.2e-31 107.0 1.5 1.6e-30 105.2 0.2 2.3 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|16081897|ref|NP_394301.1| - 1.2e-28 99.7 0.1 1.9e-28 99.1 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|16081897|ref|NP_394301.1| - 1.3e-14 55.4 0.0 2.5e-14 54.5 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|16081897|ref|NP_394301.1| - 1.9e-06 27.5 0.2 2.5e-06 27.1 0.2 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 gi|16081897|ref|NP_394301.1| - 7e-06 25.5 1.1 1.2e-05 24.7 1.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|16081897|ref|NP_394301.1| - 0.004 16.5 0.5 0.0069 15.8 0.5 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|16081897|ref|NP_394301.1| - 0.013 15.3 0.3 0.021 14.5 0.3 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase adh_short PF00106.25 gi|16081897|ref|NP_394301.1| - 0.013 14.9 1.3 0.031 13.8 1.3 1.7 1 1 0 1 1 1 0 short chain dehydrogenase CMAS PF02353.20 gi|16081897|ref|NP_394301.1| - 0.023 14.0 0.1 0.036 13.4 0.1 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TrkA_N PF02254.18 gi|16081897|ref|NP_394301.1| - 0.037 14.3 0.0 0.083 13.2 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain PALP PF00291.25 gi|16081897|ref|NP_394301.1| - 0.039 13.4 0.1 0.059 12.8 0.1 1.2 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Epimerase PF01370.21 gi|16081897|ref|NP_394301.1| - 0.13 11.7 0.2 0.26 10.7 0.1 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family ACP_syn_III_C PF08541.10 gi|16081897|ref|NP_394301.1| - 0.14 12.3 0.1 0.3 11.3 0.1 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DapB_N PF01113.20 gi|16081897|ref|NP_394301.1| - 0.18 11.9 1.8 1.9 8.7 0.8 2.3 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_10 PF13460.6 gi|16081897|ref|NP_394301.1| - 0.18 11.6 0.5 0.34 10.8 0.2 1.6 2 0 0 2 2 2 0 NAD(P)H-binding Fe_dep_repr_C PF02742.15 gi|16081898|ref|NP_394302.1| - 1.5e-13 50.6 0.0 2.2e-13 50.1 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|16081898|ref|NP_394302.1| - 1e-06 28.8 0.0 1.9e-06 28.0 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_45 PF14947.6 gi|16081898|ref|NP_394302.1| - 3.9e-06 26.8 0.0 6.3e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|16081898|ref|NP_394302.1| - 6e-06 26.1 0.0 2.1e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|16081898|ref|NP_394302.1| - 8.2e-05 22.5 0.0 0.00015 21.6 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|16081898|ref|NP_394302.1| - 8.7e-05 22.8 0.0 0.00013 22.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|16081898|ref|NP_394302.1| - 0.00012 22.0 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|16081898|ref|NP_394302.1| - 0.00037 20.0 0.1 0.00093 18.7 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|16081898|ref|NP_394302.1| - 0.0012 19.3 0.0 0.0019 18.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 gi|16081898|ref|NP_394302.1| - 0.0016 18.2 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_IclR PF09339.10 gi|16081898|ref|NP_394302.1| - 0.0018 18.0 0.0 0.0037 17.0 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|16081898|ref|NP_394302.1| - 0.0027 17.6 0.1 0.0066 16.3 0.1 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB B-block_TFIIIC PF04182.12 gi|16081898|ref|NP_394302.1| - 0.0034 17.5 0.0 0.0044 17.2 0.0 1.3 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HemN_C PF06969.16 gi|16081898|ref|NP_394302.1| - 0.011 15.7 0.0 0.13 12.4 0.0 2.1 2 0 0 2 2 2 0 HemN C-terminal domain HTH_10 PF04967.12 gi|16081898|ref|NP_394302.1| - 0.015 15.1 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain IF2_N PF04760.15 gi|16081898|ref|NP_394302.1| - 0.046 13.6 0.1 3.8 7.4 0.0 2.6 3 0 0 3 3 2 0 Translation initiation factor IF-2, N-terminal region Penicillinase_R PF03965.16 gi|16081898|ref|NP_394302.1| - 0.055 13.8 0.0 0.091 13.1 0.0 1.4 1 1 0 1 1 1 0 Penicillinase repressor TFIIE_alpha PF02002.17 gi|16081898|ref|NP_394302.1| - 0.059 13.2 0.1 0.098 12.5 0.1 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_36 PF13730.6 gi|16081898|ref|NP_394302.1| - 0.089 12.8 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|16081898|ref|NP_394302.1| - 0.093 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family PadR PF03551.14 gi|16081898|ref|NP_394302.1| - 0.093 12.7 0.0 0.21 11.6 0.0 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family Mrr_N PF14338.6 gi|16081898|ref|NP_394302.1| - 0.17 12.0 0.1 0.32 11.2 0.1 1.4 1 0 0 1 1 1 0 Mrr N-terminal domain ThiF PF00899.21 gi|16081900|ref|NP_394304.1| - 3.3e-60 203.5 0.2 4.3e-60 203.1 0.2 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 gi|16081900|ref|NP_394304.1| - 2.6e-06 27.5 0.2 5.4e-06 26.5 0.2 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|16081900|ref|NP_394304.1| - 3.1e-05 24.2 4.0 0.00042 20.6 4.0 2.2 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|16081900|ref|NP_394304.1| - 0.001 18.8 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA KR PF08659.10 gi|16081900|ref|NP_394304.1| - 0.0021 18.0 0.1 0.0032 17.4 0.1 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_7 PF13241.6 gi|16081900|ref|NP_394304.1| - 0.0023 18.4 0.3 0.0038 17.7 0.3 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|16081900|ref|NP_394304.1| - 0.0048 17.1 3.0 0.0059 16.9 0.2 2.1 1 1 0 2 2 2 1 TrkA-N domain 3HCDH_N PF02737.18 gi|16081900|ref|NP_394304.1| - 0.016 15.1 0.8 0.026 14.4 0.8 1.5 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|16081900|ref|NP_394304.1| - 0.017 14.5 0.1 0.032 13.6 0.0 1.4 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PglD_N PF17836.1 gi|16081900|ref|NP_394304.1| - 0.019 15.6 0.0 0.034 14.8 0.0 1.4 1 0 0 1 1 1 0 PglD N-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|16081900|ref|NP_394304.1| - 0.039 13.5 0.1 0.058 13.0 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_3 PF01494.19 gi|16081900|ref|NP_394304.1| - 0.082 12.1 3.5 0.051 12.8 1.4 1.7 1 1 1 2 2 2 0 FAD binding domain ELFV_dehydrog PF00208.21 gi|16081900|ref|NP_394304.1| - 0.11 12.1 0.2 0.2 11.3 0.2 1.5 1 1 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DAO PF01266.24 gi|16081900|ref|NP_394304.1| - 0.13 11.8 0.0 0.23 11.0 0.0 1.5 2 0 0 2 2 2 0 FAD dependent oxidoreductase DUF2072 PF09845.9 gi|16081900|ref|NP_394304.1| - 0.17 12.2 0.2 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Zn-ribbon containing protein HAD_2 PF13419.6 gi|16081901|ref|NP_394305.1| - 7.8e-33 114.0 0.1 2e-32 112.7 0.0 1.6 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|16081901|ref|NP_394305.1| - 3.7e-18 66.6 0.5 8.2e-16 58.9 0.5 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|16081901|ref|NP_394305.1| - 1.3e-08 34.8 0.0 2.7e-08 33.7 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|16081901|ref|NP_394305.1| - 1.6e-07 31.9 0.1 6.2e-07 30.0 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|16081901|ref|NP_394305.1| - 0.00015 21.6 0.4 0.08 12.7 0.0 2.9 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|16081901|ref|NP_394305.1| - 0.014 15.5 0.0 0.28 11.3 0.0 2.8 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase Thiamine_BP PF01910.17 gi|16082562|ref|NP_394307.1| - 6.8e-25 86.8 0.1 7.5e-25 86.7 0.1 1.0 1 0 0 1 1 1 1 Thiamine-binding protein SfsA PF03749.13 gi|16082562|ref|NP_394307.1| - 0.035 14.0 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 Sugar fermentation stimulation protein RE domain GAF_2 PF13185.6 gi|16081903|ref|NP_394308.1| - 1e-08 35.6 0.0 1.1e-08 35.4 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|16081903|ref|NP_394308.1| - 1.1e-05 26.0 0.0 1.3e-05 25.8 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|16081903|ref|NP_394308.1| - 0.0031 17.9 0.0 0.0035 17.7 0.0 1.2 1 0 0 1 1 1 1 GAF domain SpoVT_C PF15714.5 gi|16081903|ref|NP_394308.1| - 0.057 13.5 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor tRNA-synt_2c PF01411.19 gi|16081904|ref|NP_394309.1| - 1.2e-102 344.3 0.1 3.1e-102 342.9 0.1 1.6 1 1 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|16081904|ref|NP_394309.1| - 1.1e-10 41.5 1.2 2.3e-10 40.4 1.2 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Pilin_N PF07790.11 gi|16081905|ref|NP_394310.1| - 1.1e-08 35.8 3.4 1.1e-08 35.8 3.4 1.9 2 1 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Wzz PF02706.15 gi|16081905|ref|NP_394310.1| - 0.39 11.1 3.4 0.82 10.0 2.7 1.8 1 1 1 2 2 2 0 Chain length determinant protein GCD14 PF08704.10 gi|16081906|ref|NP_394311.1| - 9.5e-24 84.4 0.0 2.8e-22 79.6 0.0 2.0 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|16081906|ref|NP_394311.1| - 1.6e-07 31.3 0.0 2.4e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16081906|ref|NP_394311.1| - 2.1e-06 28.3 0.0 6.5e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16081906|ref|NP_394311.1| - 7.9e-06 25.8 0.0 1.5e-05 24.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|16081906|ref|NP_394311.1| - 0.00071 19.4 0.0 0.001 18.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_5 PF01795.19 gi|16081906|ref|NP_394311.1| - 0.0013 18.3 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 MraW methylase family Methyltransf_24 PF13578.6 gi|16081906|ref|NP_394311.1| - 0.0053 17.8 0.0 0.0095 16.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081906|ref|NP_394311.1| - 0.0063 17.2 0.0 0.017 15.8 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|16081906|ref|NP_394311.1| - 0.0068 15.9 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase IpaB_EvcA PF03278.13 gi|16081906|ref|NP_394311.1| - 0.0077 16.0 0.2 0.1 12.3 0.0 2.2 2 0 0 2 2 2 1 IpaB/EvcA family MTS PF05175.14 gi|16081906|ref|NP_394311.1| - 0.0096 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|16081906|ref|NP_394311.1| - 0.01 16.5 0.0 0.023 15.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|16081906|ref|NP_394311.1| - 0.033 13.6 0.0 0.045 13.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|16081906|ref|NP_394311.1| - 0.064 12.6 0.0 0.1 11.9 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltr_RsmB-F PF01189.17 gi|16081906|ref|NP_394311.1| - 0.094 12.3 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F CMAS PF02353.20 gi|16081906|ref|NP_394311.1| - 0.097 11.9 0.1 0.21 10.9 0.0 1.6 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 gi|16081906|ref|NP_394311.1| - 0.1 11.7 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase AA_permease PF00324.21 gi|16081907|ref|NP_394312.1| - 5.5e-29 101.1 58.7 7.6e-29 100.6 58.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16081907|ref|NP_394312.1| - 1.3e-23 83.6 64.1 3.6e-23 82.1 64.1 1.6 1 1 0 1 1 1 1 Amino acid permease SIS_2 PF13580.6 gi|16081908|ref|NP_394313.1| - 4.8e-28 97.9 0.9 5.9e-28 97.6 0.9 1.1 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 gi|16081908|ref|NP_394313.1| - 5e-10 39.3 1.4 2e-08 34.1 0.1 2.9 1 1 2 3 3 3 2 SIS domain ABC2_membrane_2 PF12679.7 gi|16081910|ref|NP_394315.1| - 1.4e-08 34.4 29.8 2.1e-08 33.8 29.8 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|16081910|ref|NP_394315.1| - 0.00098 18.3 38.4 0.00098 18.3 38.4 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|16081910|ref|NP_394315.1| - 0.0029 17.2 37.2 0.0029 17.2 37.2 2.9 1 1 1 2 2 2 1 ABC-2 family transporter protein CCSMST1 PF15013.6 gi|16081910|ref|NP_394315.1| - 0.1 12.7 0.1 0.1 12.7 0.1 3.0 3 0 0 3 3 3 0 CCSMST1 family ABC_tran PF00005.27 gi|16081911|ref|NP_394316.1| - 1.3e-24 87.2 0.0 2e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16081911|ref|NP_394316.1| - 6.9e-10 39.2 0.2 0.001 18.9 0.2 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|16081911|ref|NP_394316.1| - 2e-05 24.6 0.0 3.2e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|16081911|ref|NP_394316.1| - 0.00055 19.6 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|16081911|ref|NP_394316.1| - 0.0008 19.7 0.1 0.0028 17.9 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|16081911|ref|NP_394316.1| - 0.0014 19.2 0.1 0.0027 18.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|16081911|ref|NP_394316.1| - 0.0073 16.0 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|16081911|ref|NP_394316.1| - 0.0094 15.3 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|16081911|ref|NP_394316.1| - 0.012 16.1 0.0 0.053 13.9 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF4162 PF13732.6 gi|16081911|ref|NP_394316.1| - 0.013 16.2 0.0 0.03 15.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) AAA_27 PF13514.6 gi|16081911|ref|NP_394316.1| - 0.017 14.7 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16081911|ref|NP_394316.1| - 0.017 15.5 0.0 0.025 15.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|16081911|ref|NP_394316.1| - 0.022 14.7 0.1 0.046 13.6 0.1 1.5 1 0 0 1 1 1 0 NTPase RsgA_GTPase PF03193.16 gi|16081911|ref|NP_394316.1| - 0.029 14.3 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 gi|16081911|ref|NP_394316.1| - 0.081 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 gi|16081911|ref|NP_394316.1| - 0.11 12.2 0.0 0.43 10.3 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_13 PF13166.6 gi|16081911|ref|NP_394316.1| - 0.15 10.7 0.1 0.84 8.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|16081911|ref|NP_394316.1| - 0.23 10.9 0.5 2.5 7.5 0.3 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain 2-Hacid_dh_C PF02826.19 gi|16081912|ref|NP_394317.1| - 4.9e-40 136.8 0.0 6.6e-40 136.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|16081912|ref|NP_394317.1| - 2.4e-11 43.5 0.0 3.5e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|16081912|ref|NP_394317.1| - 0.00041 20.5 0.0 0.00071 19.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|16081912|ref|NP_394317.1| - 0.013 16.1 0.3 0.048 14.3 0.3 2.0 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|16081912|ref|NP_394317.1| - 0.028 14.5 0.0 0.065 13.3 0.0 1.6 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PglD_N PF17836.1 gi|16081912|ref|NP_394317.1| - 0.055 14.1 0.0 1.6 9.4 0.0 2.7 2 0 0 2 2 2 0 PglD N-terminal domain GtrA PF04138.14 gi|16082563|ref|NP_394319.1| - 4.6e-19 68.8 5.2 8.4e-19 67.9 5.2 1.4 1 0 0 1 1 1 1 GtrA-like protein Peptidase_M48 PF01435.18 gi|16081914|ref|NP_394320.1| - 1e-36 126.6 0.0 1e-36 126.6 0.0 1.5 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|16081914|ref|NP_394320.1| - 3.4e-05 23.2 0.5 9.3e-05 21.8 0.1 1.7 2 0 0 2 2 2 1 BlaR1 peptidase M56 GT87 PF09594.10 gi|16081915|ref|NP_394321.1| - 5.5e-07 29.5 18.5 5.5e-07 29.5 18.5 2.5 2 0 0 2 2 2 1 Glycosyltransferase family 87 DUF2892 PF11127.8 gi|16081916|ref|NP_394322.1| - 0.0026 17.7 0.9 0.0026 17.7 0.9 4.0 5 1 0 5 5 5 1 Protein of unknown function (DUF2892) DUF4395 PF14340.6 gi|16081916|ref|NP_394322.1| - 0.014 15.7 1.6 0.014 15.7 1.6 3.8 3 1 0 4 4 4 0 Domain of unknown function (DUF4395) HSP20 PF00011.21 gi|16081917|ref|NP_394323.1| - 3.7e-15 55.9 0.6 4.3e-15 55.7 0.6 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|16081917|ref|NP_394323.1| - 6.6e-10 38.4 0.1 1.5e-09 37.3 0.1 1.6 1 1 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|16081917|ref|NP_394323.1| - 0.022 15.7 0.1 0.04 14.9 0.1 1.6 1 1 0 1 1 1 0 CS domain ABC1 PF03109.16 gi|16081918|ref|NP_394324.1| - 2.1e-25 89.2 0.1 4.4e-25 88.2 0.1 1.5 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|16081918|ref|NP_394324.1| - 1.5e-05 24.7 3.4 0.00015 21.4 2.5 2.8 2 1 0 2 2 2 1 RIO1 family Pkinase PF00069.25 gi|16081918|ref|NP_394324.1| - 0.0013 18.2 1.1 0.0051 16.2 0.2 2.0 2 0 0 2 2 2 1 Protein kinase domain APH PF01636.23 gi|16081918|ref|NP_394324.1| - 0.0026 17.7 0.1 0.71 9.8 0.1 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|16081918|ref|NP_394324.1| - 0.018 14.3 0.1 0.29 10.4 0.0 2.1 2 0 0 2 2 2 0 Protein tyrosine kinase Thioredoxin PF00085.20 gi|16081919|ref|NP_394325.1| - 3.1e-22 78.5 0.5 3.5e-22 78.3 0.5 1.0 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 gi|16081919|ref|NP_394325.1| - 5.6e-05 22.6 0.0 6.4e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|16081919|ref|NP_394325.1| - 6.3e-05 23.2 0.3 0.00028 21.2 0.3 2.0 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|16081919|ref|NP_394325.1| - 0.0012 19.3 0.8 0.045 14.2 0.8 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.21 gi|16081919|ref|NP_394325.1| - 0.0041 17.0 0.1 0.0049 16.8 0.1 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_9 PF14595.6 gi|16081919|ref|NP_394325.1| - 0.0061 16.3 0.5 0.0072 16.1 0.5 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|16081919|ref|NP_394325.1| - 0.0086 16.1 0.1 0.011 15.7 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin domain RNase_P_Rpp14 PF01900.19 gi|16081920|ref|NP_394326.1| - 0.12 12.6 1.0 6.1 7.2 0.2 2.1 1 1 1 2 2 2 0 Rpp14/Pop5 family PadR PF03551.14 gi|16082564|ref|NP_394327.1| - 4.5e-13 49.0 0.0 9e-13 48.0 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|16082564|ref|NP_394327.1| - 5.8e-05 23.7 0.0 0.00014 22.4 0.0 1.5 1 1 0 1 1 1 1 Replication terminator protein DUF1803 PF08820.10 gi|16082564|ref|NP_394327.1| - 0.015 15.3 0.0 8.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1803) Stork_head PF10264.9 gi|16082564|ref|NP_394327.1| - 0.025 14.7 0.0 0.066 13.4 0.0 1.7 2 0 0 2 2 2 0 Winged helix Storkhead-box1 domain TBPIP PF07106.13 gi|16082564|ref|NP_394327.1| - 0.025 14.5 0.0 0.076 13.0 0.0 1.8 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain HTH_45 PF14947.6 gi|16082564|ref|NP_394327.1| - 0.033 14.2 0.0 0.1 12.6 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix Mrr_N PF14338.6 gi|16082564|ref|NP_394327.1| - 0.055 13.6 0.0 0.24 11.6 0.0 1.9 2 0 0 2 2 2 0 Mrr N-terminal domain Penicillinase_R PF03965.16 gi|16082564|ref|NP_394327.1| - 0.084 13.2 0.0 0.68 10.3 0.1 2.0 2 0 0 2 2 2 0 Penicillinase repressor ATP-cone PF03477.16 gi|16082564|ref|NP_394327.1| - 0.11 13.1 0.2 3.7 8.2 0.1 2.2 1 1 1 2 2 2 0 ATP cone domain ABC_tran PF00005.27 gi|16081921|ref|NP_394328.1| - 2.7e-29 102.4 0.0 4.7e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|16081921|ref|NP_394328.1| - 2.8e-12 47.2 0.0 8.5e-12 45.6 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|16081921|ref|NP_394328.1| - 4.6e-09 36.5 0.2 0.00011 22.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|16081921|ref|NP_394328.1| - 0.00035 21.0 0.2 0.0042 17.5 0.2 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|16081921|ref|NP_394328.1| - 0.00075 20.0 0.5 0.0019 18.7 0.5 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|16081921|ref|NP_394328.1| - 0.0026 17.5 0.4 0.89 9.2 0.2 2.6 2 1 1 3 3 3 2 AAA ATPase domain AAA_24 PF13479.6 gi|16081921|ref|NP_394328.1| - 0.0053 16.5 0.1 1 9.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|16081921|ref|NP_394328.1| - 0.011 16.1 0.1 0.041 14.2 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|16081921|ref|NP_394328.1| - 0.013 15.2 0.4 0.077 12.8 0.1 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|16081921|ref|NP_394328.1| - 0.048 12.9 0.0 0.095 12.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 gi|16081921|ref|NP_394328.1| - 0.067 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|16081921|ref|NP_394328.1| - 0.084 12.5 0.2 0.36 10.4 0.3 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain SPECT1 PF18680.1 gi|16081921|ref|NP_394328.1| - 0.086 12.5 0.2 3.9 7.1 0.0 2.8 2 1 1 3 3 3 0 Plasmodium host cell traversal SPECT1 ABC2_membrane PF01061.24 gi|16081922|ref|NP_394329.1| - 1.1e-37 129.5 24.5 1.1e-37 129.5 24.5 2.0 1 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|16081922|ref|NP_394329.1| - 3.6e-15 55.9 37.9 3.6e-15 55.9 37.9 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|16081922|ref|NP_394329.1| - 0.1 11.9 32.1 0.41 9.9 32.1 1.9 1 1 0 1 1 1 0 ABC-2 family transporter protein Radical_SAM PF04055.21 gi|16081923|ref|NP_394330.1| - 2.2e-08 34.6 0.2 8.7e-08 32.7 0.1 1.9 2 1 0 2 2 2 1 Radical SAM superfamily Fe_dep_repr_C PF02742.15 gi|16081924|ref|NP_394331.1| - 1.1e-20 73.5 0.7 2e-20 72.6 0.1 1.8 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain FeoA PF04023.14 gi|16081924|ref|NP_394331.1| - 6.7e-08 32.7 1.2 9.6e-08 32.2 0.2 1.8 2 0 0 2 2 2 1 FeoA domain DUF4423 PF14394.6 gi|16081924|ref|NP_394331.1| - 8.1e-06 25.6 0.0 1.4e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|16081924|ref|NP_394331.1| - 0.0017 18.5 0.2 0.0033 17.6 0.2 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|16081924|ref|NP_394331.1| - 0.005 16.7 0.1 0.012 15.5 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|16081924|ref|NP_394331.1| - 0.015 15.2 0.6 0.055 13.4 0.3 2.0 2 0 0 2 2 2 0 HTH domain Mnd1 PF03962.15 gi|16081924|ref|NP_394331.1| - 0.02 15.2 0.1 0.47 10.8 0.0 2.4 2 0 0 2 2 2 0 Mnd1 HTH domain Glyco_tranf_2_3 PF13641.6 gi|16081925|ref|NP_394332.1| - 1.3e-17 64.4 0.0 1.9e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|16081925|ref|NP_394332.1| - 1.1e-11 44.9 0.0 2e-11 44.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|16081925|ref|NP_394332.1| - 2e-08 33.9 0.1 1.2e-07 31.4 0.1 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|16081925|ref|NP_394332.1| - 2.3e-08 34.2 0.6 4.3e-08 33.3 0.6 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 NTP_transf_3 PF12804.7 gi|16081925|ref|NP_394332.1| - 0.11 12.8 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 MobA-like NTP transferase domain LysE PF01810.18 gi|16081927|ref|NP_394334.1| - 2.4e-12 46.7 14.9 3.5e-12 46.2 14.9 1.3 1 0 0 1 1 1 1 LysE type translocator DPM3 PF08285.11 gi|16081927|ref|NP_394334.1| - 0.087 13.0 10.2 0.57 10.4 3.3 2.3 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Usp PF00582.26 gi|16081928|ref|NP_394335.1| - 1.5e-25 90.3 0.0 1.7e-25 90.1 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF3557 PF12078.8 gi|16081928|ref|NP_394335.1| - 0.059 13.3 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) AA_permease PF00324.21 gi|16081929|ref|NP_394336.1| - 5.8e-36 124.1 59.7 9e-36 123.5 59.7 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16081929|ref|NP_394336.1| - 2.5e-24 85.9 62.1 3.9e-24 85.3 62.1 1.2 1 0 0 1 1 1 1 Amino acid permease Rib_5-P_isom_A PF06026.14 gi|16081930|ref|NP_394337.1| - 3.5e-55 186.2 0.0 4.4e-55 185.9 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|16081930|ref|NP_394337.1| - 6.2e-07 29.5 0.3 0.0001 22.3 0.1 2.2 1 1 1 2 2 2 2 DeoR C terminal sensor domain CoA_trans PF01144.23 gi|16081930|ref|NP_394337.1| - 0.035 13.5 0.2 0.088 12.2 0.0 1.7 1 1 1 2 2 2 0 Coenzyme A transferase tRNA-synt_1 PF00133.22 gi|16081931|ref|NP_394338.1| - 1.5e-162 542.0 0.0 1.9e-162 541.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|16081931|ref|NP_394338.1| - 6.1e-32 110.7 0.0 1.3e-31 109.7 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|16081931|ref|NP_394338.1| - 3e-18 65.7 6.3 3e-08 32.8 0.3 4.2 4 1 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|16081931|ref|NP_394338.1| - 7e-07 28.5 0.0 1.1e-05 24.5 0.0 2.7 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|16081931|ref|NP_394338.1| - 0.00013 21.4 0.1 0.006 16.0 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain zf-TFIIB PF13453.6 gi|16081931|ref|NP_394338.1| - 0.089 12.1 1.1 6.6 6.2 0.1 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger zf_UBZ PF18439.1 gi|16081931|ref|NP_394338.1| - 4.2 7.0 4.9 33 4.2 0.1 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger PfkB PF00294.24 gi|16081932|ref|NP_394339.1| - 9.3e-26 90.8 0.0 1.9e-25 89.8 0.0 1.4 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Hexapep PF00132.24 gi|16082565|ref|NP_394340.1| - 9.1e-10 37.9 13.0 0.011 15.4 0.1 4.5 3 2 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|16082565|ref|NP_394340.1| - 3e-08 33.3 5.2 0.019 14.7 0.2 4.3 2 1 2 4 4 4 3 Hexapeptide repeat of succinyl-transferase Enolase_C PF00113.22 gi|16081933|ref|NP_394341.1| - 3.2e-63 213.7 0.7 4e-63 213.4 0.7 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|16081933|ref|NP_394341.1| - 3.3e-34 117.9 0.0 6.2e-34 117.0 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|16081933|ref|NP_394341.1| - 2.1e-07 30.8 0.0 3.1e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|16081933|ref|NP_394341.1| - 0.016 14.3 0.0 0.026 13.7 0.0 1.3 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus TP_methylase PF00590.20 gi|16081934|ref|NP_394342.1| - 3.9e-14 53.1 0.0 4.7e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Rieske PF00355.26 gi|16081935|ref|NP_394343.1| - 7.8e-11 41.8 0.1 9.6e-11 41.5 0.1 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|16081935|ref|NP_394343.1| - 4.9e-06 26.4 0.0 6.5e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF296 PF03479.15 gi|16082566|ref|NP_394344.1| - 1.2e-20 73.8 0.0 1.4e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain PEP-utilizers_C PF02896.18 gi|16081936|ref|NP_394345.1| - 7.9e-89 297.6 0.0 1.4e-88 296.8 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|16081936|ref|NP_394345.1| - 4.4e-60 203.7 0.1 6.7e-36 124.2 0.0 3.3 1 1 2 3 3 3 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|16081936|ref|NP_394345.1| - 3.8e-26 90.6 1.2 9.6e-26 89.3 1.2 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain S4_2 PF13275.6 gi|16081936|ref|NP_394345.1| - 0.025 14.4 0.1 0.063 13.1 0.1 1.6 1 0 0 1 1 1 0 S4 domain HpcH_HpaI PF03328.14 gi|16081936|ref|NP_394345.1| - 0.092 11.9 0.0 0.17 11.0 0.0 1.4 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DUF3452 PF11934.8 gi|16081936|ref|NP_394345.1| - 0.18 11.4 0.0 0.41 10.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Smoothelin PF12510.8 gi|16081936|ref|NP_394345.1| - 0.19 11.8 0.9 1.1 9.3 0.1 2.4 2 0 0 2 2 2 0 Smoothelin cytoskeleton protein Abhydrolase_1 PF00561.20 gi|16081937|ref|NP_394346.1| - 7.2e-28 97.9 0.3 2.6e-20 73.2 0.1 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|16081937|ref|NP_394346.1| - 8.4e-17 62.5 0.0 4.5e-14 53.6 0.0 2.0 1 1 0 2 2 2 2 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|16081937|ref|NP_394346.1| - 8e-08 31.8 0.0 0.00017 21.0 0.0 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|16081937|ref|NP_394346.1| - 0.002 18.0 0.0 2 8.2 0.0 3.0 3 0 0 3 3 3 1 Phospholipase/Carboxylesterase BAAT_C PF08840.11 gi|16081937|ref|NP_394346.1| - 0.0054 16.7 0.0 0.0087 16.0 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 gi|16081937|ref|NP_394346.1| - 0.0089 15.5 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family UPF0227 PF05728.12 gi|16081937|ref|NP_394346.1| - 0.013 15.4 0.0 0.02 14.9 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Thioesterase PF00975.20 gi|16081937|ref|NP_394346.1| - 0.014 15.5 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_5 PF12695.7 gi|16081937|ref|NP_394346.1| - 0.031 14.0 0.1 5.1 6.8 0.0 2.2 1 1 1 2 2 2 0 Alpha/beta hydrolase family Esterase PF00756.20 gi|16081937|ref|NP_394346.1| - 0.042 13.5 0.0 0.059 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative esterase DUF1053 PF06327.14 gi|16081937|ref|NP_394346.1| - 0.097 13.2 0.2 0.16 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) CN_hydrolase PF00795.22 gi|16082567|ref|NP_394347.1| - 1.6e-15 57.1 0.0 2.3e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Flavoprotein PF02441.19 gi|16081938|ref|NP_394348.1| - 2.6e-32 111.8 0.0 4.1e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 Flavoprotein DFP PF04127.15 gi|16081938|ref|NP_394348.1| - 2.3e-28 99.3 0.0 5.9e-28 98.0 0.0 1.7 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein TrmB PF01978.19 gi|16081939|ref|NP_394349.1| - 2.7e-21 75.2 0.0 6.4e-21 74.0 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|16081939|ref|NP_394349.1| - 1e-07 31.4 0.1 1.4e-07 31.0 0.1 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Rrf2 PF02082.20 gi|16081939|ref|NP_394349.1| - 0.0027 18.0 0.0 0.0058 17.0 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator ZnuA PF01297.17 gi|16081939|ref|NP_394349.1| - 0.032 13.6 0.1 0.044 13.2 0.1 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic HTH_IclR PF09339.10 gi|16081939|ref|NP_394349.1| - 0.14 12.0 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain AP_endonuc_2 PF01261.24 gi|16081940|ref|NP_394350.1| - 3.1e-36 124.8 0.0 3.8e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel PRMT5_TIM PF17285.2 gi|16081940|ref|NP_394350.1| - 0.042 13.0 0.0 0.054 12.7 0.0 1.2 1 0 0 1 1 1 0 PRMT5 TIM barrel domain DUF1015 PF06245.11 gi|16081941|ref|NP_394351.1| - 5.2e-72 242.9 0.0 5.8e-72 242.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) ParBc PF02195.18 gi|16081941|ref|NP_394351.1| - 0.13 12.6 0.3 0.35 11.2 0.1 1.9 1 1 1 2 2 2 0 ParB-like nuclease domain DUF2095 PF09868.9 gi|16081942|ref|NP_394352.1| - 0.098 12.6 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2095) GHMP_kinases_N PF00288.26 gi|16081942|ref|NP_394352.1| - 0.1 12.8 0.2 0.2 11.9 0.2 1.4 1 0 0 1 1 1 0 GHMP kinases N terminal domain CbiZ PF01955.18 gi|16081943|ref|NP_394353.1| - 2.4e-45 155.0 0.2 2.7e-45 154.8 0.2 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase ThiS PF02597.20 gi|16081944|ref|NP_394354.1| - 1.2e-18 67.5 0.0 1.3e-18 67.4 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|16081944|ref|NP_394354.1| - 0.013 15.8 0.1 0.014 15.8 0.1 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) PK PF00224.21 gi|16081945|ref|NP_394355.1| - 1.5e-92 310.2 9.4 7.8e-92 307.8 8.3 2.1 2 0 0 2 2 2 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|16081945|ref|NP_394355.1| - 2.1e-18 66.7 0.0 4.8e-18 65.5 0.0 1.6 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|16081945|ref|NP_394355.1| - 0.018 14.2 3.5 0.041 13.0 2.9 2.0 1 1 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family Glu_dehyd_C PF16912.5 gi|16081946|ref|NP_394356.1| - 7.3e-23 81.2 0.0 9.5e-23 80.8 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N PF08240.12 gi|16081946|ref|NP_394356.1| - 1.7e-08 34.3 0.0 2.6e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|16081946|ref|NP_394356.1| - 0.00015 21.7 0.0 0.00038 20.4 0.0 1.7 1 1 0 1 1 1 1 Zinc-binding dehydrogenase DapB_N PF01113.20 gi|16081946|ref|NP_394356.1| - 0.016 15.3 0.0 0.031 14.4 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DUF1188 PF06690.11 gi|16081946|ref|NP_394356.1| - 0.1 12.2 0.1 0.15 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) THF_DHG_CYH_C PF02882.19 gi|16081947|ref|NP_394357.1| - 2.4e-55 186.2 0.5 3.2e-55 185.8 0.5 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|16081947|ref|NP_394357.1| - 9.2e-23 80.7 0.2 1.9e-22 79.7 0.2 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NAD_synthase PF02540.17 gi|16081948|ref|NP_394358.1| - 5.3e-71 238.5 0.0 6.4e-71 238.3 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|16081948|ref|NP_394358.1| - 0.00016 20.6 0.0 0.00046 19.1 0.0 1.7 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.13 gi|16081948|ref|NP_394358.1| - 0.0016 18.0 0.0 0.0036 16.8 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|16081948|ref|NP_394358.1| - 0.0095 15.6 0.0 0.0095 15.6 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase PAPS_reduct PF01507.19 gi|16081948|ref|NP_394358.1| - 0.023 14.7 0.0 0.2 11.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|16081948|ref|NP_394358.1| - 0.045 13.5 0.0 0.063 13.0 0.0 1.2 1 0 0 1 1 1 0 PP-loop family Na_H_Exchanger PF00999.21 gi|16081949|ref|NP_394359.1| - 1.4e-34 119.5 47.2 1.9e-34 119.1 47.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family T2SSE PF00437.20 gi|16081950|ref|NP_394360.1| - 6.1e-13 48.4 0.0 1.3e-12 47.4 0.0 1.5 1 1 0 1 1 1 1 Type II/IV secretion system protein T2SSF PF00482.23 gi|16081951|ref|NP_394361.1| - 2.1e-10 40.6 0.6 2.1e-10 40.6 0.6 2.4 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F Phage_holin_3_6 PF07332.11 gi|16081951|ref|NP_394361.1| - 0.25 11.4 6.6 3.1 7.9 0.1 2.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 gi|16081951|ref|NP_394361.1| - 1.1 8.0 8.1 1.3 7.7 0.4 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) DUF2070 PF09843.9 gi|16081951|ref|NP_394361.1| - 3.2 5.9 13.9 0.53 8.5 1.3 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2070) T2SSF PF00482.23 gi|16081952|ref|NP_394362.1| - 4.5e-12 46.0 0.0 4.5e-12 46.0 0.0 2.2 3 1 0 3 3 3 1 Type II secretion system (T2SS), protein F DUF1700 PF08006.11 gi|16081952|ref|NP_394362.1| - 0.0058 16.2 1.8 0.0058 16.2 1.8 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1700) DUF962 PF06127.11 gi|16081952|ref|NP_394362.1| - 0.049 13.7 1.2 2.6 8.2 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF962) Internalin_N PF12354.8 gi|16081952|ref|NP_394362.1| - 0.28 11.3 2.5 0.32 11.1 0.0 2.3 2 0 0 2 2 2 0 Bacterial adhesion/invasion protein N terminal Amnionless PF14828.6 gi|16081952|ref|NP_394362.1| - 0.83 8.4 2.3 0.94 8.2 0.4 1.8 1 1 0 2 2 2 0 Amnionless DUF2157 PF09925.9 gi|16081952|ref|NP_394362.1| - 1.3 8.8 7.0 0.42 10.4 0.4 2.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Sigma_reg_N PF13800.6 gi|16081952|ref|NP_394362.1| - 6.5 7.1 11.2 51 4.2 3.6 3.9 3 1 1 4 4 4 0 Sigma factor regulator N-terminal T2SSE PF00437.20 gi|16081953|ref|NP_394363.1| - 1.9e-35 122.3 0.0 2.6e-35 121.8 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|16081953|ref|NP_394363.1| - 0.00044 19.9 0.0 0.00096 18.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|16081953|ref|NP_394363.1| - 0.0023 18.5 0.8 0.005 17.4 0.8 1.5 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|16081953|ref|NP_394363.1| - 0.026 15.0 0.0 0.064 13.8 0.0 1.6 1 0 0 1 1 1 0 ABC transporter FtsK_SpoIIIE PF01580.18 gi|16081953|ref|NP_394363.1| - 0.031 13.6 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_21 PF13304.6 gi|16081953|ref|NP_394363.1| - 0.036 13.9 0.1 0.14 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|16081953|ref|NP_394363.1| - 0.045 12.6 0.0 0.095 11.5 0.0 1.5 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Zeta_toxin PF06414.12 gi|16081953|ref|NP_394363.1| - 0.097 11.9 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 gi|16081953|ref|NP_394363.1| - 0.12 12.6 0.0 0.25 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 gi|16081953|ref|NP_394363.1| - 0.13 12.2 0.1 10 6.0 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 gi|16081953|ref|NP_394363.1| - 0.13 12.6 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain G-alpha PF00503.20 gi|16081953|ref|NP_394363.1| - 0.16 11.1 0.0 0.31 10.2 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit cobW PF02492.19 gi|16081953|ref|NP_394363.1| - 0.16 11.6 0.1 0.29 10.7 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Sigma54_activat PF00158.26 gi|16081953|ref|NP_394363.1| - 0.17 11.6 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain MMR_HSR1 PF01926.23 gi|16081954|ref|NP_394364.1| - 1.6e-21 76.5 0.0 3.7e-21 75.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_C PF08438.10 gi|16081954|ref|NP_394364.1| - 3.4e-14 53.4 0.0 5.9e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal TGS PF02824.21 gi|16081954|ref|NP_394364.1| - 9.8e-09 35.1 0.0 3e-08 33.6 0.0 1.8 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|16081954|ref|NP_394364.1| - 4e-08 32.9 0.3 9.5e-07 28.5 0.1 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|16081954|ref|NP_394364.1| - 0.00014 22.0 0.6 0.1 12.8 0.0 3.2 2 1 1 3 3 3 2 Protein of unknown function (DUF933) AIG1 PF04548.16 gi|16081954|ref|NP_394364.1| - 0.003 16.9 0.0 0.0045 16.3 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|16081954|ref|NP_394364.1| - 0.029 14.4 0.0 0.91 9.6 0.0 2.3 2 0 0 2 2 2 0 Dynamin family MMR_HSR1_Xtn PF16897.5 gi|16081954|ref|NP_394364.1| - 0.072 13.1 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 gi|16081954|ref|NP_394364.1| - 0.21 11.1 0.6 3.3 7.2 0.1 2.7 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Radical_SAM PF04055.21 gi|16081955|ref|NP_394365.1| - 4.6e-21 75.9 0.0 1.5e-19 71.0 0.0 2.3 2 0 0 2 2 2 2 Radical SAM superfamily DNA_pol_B PF00136.21 gi|16081956|ref|NP_394366.1| - 9.4e-62 209.2 0.0 1.8e-61 208.3 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|16081956|ref|NP_394366.1| - 1.3e-17 64.0 2.9 1.1e-15 57.7 2.9 2.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|16081956|ref|NP_394366.1| - 9.9e-07 28.6 0.0 1.9e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_A_exo1 PF01612.20 gi|16081956|ref|NP_394366.1| - 0.0015 18.3 0.1 0.0032 17.2 0.1 1.6 1 1 0 1 1 1 1 3'-5' exonuclease RNase_H_2 PF13482.6 gi|16081956|ref|NP_394366.1| - 0.0024 17.9 0.0 0.009 16.0 0.0 2.1 1 1 0 1 1 1 1 RNase_H superfamily DNA_pol_B_2 PF03175.13 gi|16081956|ref|NP_394366.1| - 0.0081 15.1 4.5 0.062 12.1 2.6 2.8 2 1 0 2 2 2 1 DNA polymerase type B, organellar and viral MS_channel PF00924.18 gi|16081957|ref|NP_394367.1| - 2.9e-23 82.5 2.1 2.9e-23 82.5 2.1 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel Pam17 PF08566.10 gi|16081957|ref|NP_394367.1| - 0.011 15.6 0.3 0.021 14.7 0.3 1.4 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 Glyco_transf_6 PF03414.13 gi|16081957|ref|NP_394367.1| - 0.88 8.3 3.6 18 4.0 3.3 2.1 2 0 0 2 2 2 0 Glycosyltransferase family 6 Ceramidase PF05875.12 gi|16081957|ref|NP_394367.1| - 1.2 8.5 10.4 0.75 9.2 8.4 1.6 2 0 0 2 2 2 0 Ceramidase SLATT_1 PF18181.1 gi|16081957|ref|NP_394367.1| - 7.1 6.6 8.9 0.9 9.5 0.6 2.3 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 IF-2B PF01008.17 gi|16081958|ref|NP_394368.1| - 4.9e-27 94.8 0.0 9.8e-27 93.9 0.0 1.4 1 1 0 1 1 1 1 Initiation factor 2 subunit family Aldose_epim PF01263.20 gi|16081959|ref|NP_394369.1| - 1.4e-43 149.4 0.0 2.6e-43 148.5 0.0 1.4 1 1 0 1 1 1 1 Aldose 1-epimerase Alba PF01918.21 gi|16081960|ref|NP_394370.1| - 1.9e-18 66.0 1.1 2.5e-18 65.7 1.1 1.1 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 gi|16081960|ref|NP_394370.1| - 0.016 15.2 0.1 0.018 15.0 0.1 1.4 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P adh_short_C2 PF13561.6 gi|16081961|ref|NP_394371.1| - 3e-26 92.4 0.1 4.6e-26 91.8 0.1 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|16081961|ref|NP_394371.1| - 2.3e-23 82.7 0.2 3e-23 82.3 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF1776 PF08643.10 gi|16081961|ref|NP_394371.1| - 0.0032 16.9 0.6 0.065 12.6 0.3 2.3 1 1 2 3 3 3 1 Fungal family of unknown function (DUF1776) NAD_binding_10 PF13460.6 gi|16081961|ref|NP_394371.1| - 0.0034 17.3 0.0 0.0058 16.5 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding TrkA_N PF02254.18 gi|16081961|ref|NP_394371.1| - 0.075 13.3 0.2 0.31 11.3 0.0 1.9 2 0 0 2 2 2 0 TrkA-N domain MFS_1 PF07690.16 gi|16081962|ref|NP_394372.1| - 9.2e-13 47.8 61.5 9.2e-13 47.8 61.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Regulator_TrmB PF11495.8 gi|16081962|ref|NP_394372.1| - 0.14 11.3 0.1 0.21 10.8 0.1 1.1 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB PDT PF00800.18 gi|16081963|ref|NP_394373.1| - 2e-47 161.4 0.0 2.5e-47 161.1 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|16081963|ref|NP_394373.1| - 8.1e-08 31.9 0.0 2.9e-07 30.1 0.0 2.0 2 0 0 2 2 2 1 ACT domain PCNA_N PF00705.18 gi|16081965|ref|NP_394375.1| - 1.1e-14 54.3 0.2 1.4e-12 47.4 0.1 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|16081965|ref|NP_394375.1| - 6.7e-07 29.5 0.6 2.8e-06 27.5 0.1 2.2 2 2 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|16081965|ref|NP_394375.1| - 0.037 13.5 0.0 0.064 12.7 0.0 1.5 1 1 0 1 1 1 0 Rad9 FAM219A PF15260.6 gi|16081965|ref|NP_394375.1| - 0.061 13.7 0.1 0.13 12.6 0.1 1.5 1 1 0 1 1 1 0 Protein family FAM219A FlaG PF03646.15 gi|16081965|ref|NP_394375.1| - 0.17 12.1 0.4 0.78 9.9 0.1 2.1 2 0 0 2 2 2 0 FlaG protein DUF58 PF01882.18 gi|16081967|ref|NP_394377.1| - 6.9e-13 48.7 0.0 1.3e-12 47.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|16081967|ref|NP_394377.1| - 0.019 15.6 0.0 0.038 14.6 0.0 1.5 1 0 0 1 1 1 0 von Willebrand factor type A domain AAA_3 PF07726.11 gi|16081968|ref|NP_394378.1| - 5.8e-64 213.8 0.2 1.1e-63 213.0 0.2 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|16081968|ref|NP_394378.1| - 4.2e-17 62.4 0.0 9.7e-17 61.3 0.0 1.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_lid_2 PF17863.1 gi|16081968|ref|NP_394378.1| - 3.2e-14 52.5 0.0 5.3e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 gi|16081968|ref|NP_394378.1| - 2.9e-07 31.0 0.0 7.2e-06 26.5 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|16081968|ref|NP_394378.1| - 2.1e-06 27.6 0.6 1.2e-05 25.1 0.0 2.3 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|16081968|ref|NP_394378.1| - 6.8e-06 25.6 1.7 0.0048 16.3 0.1 2.8 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|16081968|ref|NP_394378.1| - 2.3e-05 23.6 0.0 5e-05 22.5 0.0 1.6 1 1 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|16081968|ref|NP_394378.1| - 5e-05 23.1 0.0 0.00081 19.1 0.0 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 gi|16081968|ref|NP_394378.1| - 0.0018 18.4 0.0 0.0034 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|16081968|ref|NP_394378.1| - 0.025 14.1 0.0 0.04 13.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_lid_8 PF17868.1 gi|16081968|ref|NP_394378.1| - 0.11 12.4 0.3 0.28 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA lid domain DUF4576 PF15144.6 gi|16081969|ref|NP_394379.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4576) TMCO5 PF14992.6 gi|16081969|ref|NP_394379.1| - 0.28 10.7 0.1 0.28 10.7 0.1 1.6 2 0 0 2 2 2 0 TMCO5 family DUF3511 PF12023.8 gi|16081970|ref|NP_394380.1| - 0.096 12.5 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) CarboxypepD_reg PF13620.6 gi|16081971|ref|NP_394381.1| - 8.2e-20 70.9 23.0 6.6e-06 26.3 0.9 6.3 6 0 0 6 6 6 4 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|16081971|ref|NP_394381.1| - 2.1e-10 40.5 16.6 0.0071 16.3 0.3 6.2 6 0 0 6 6 6 4 CarboxypepD_reg-like domain PEGA PF08308.11 gi|16081971|ref|NP_394381.1| - 0.00011 22.1 6.3 0.27 11.2 0.3 5.3 4 0 0 4 4 4 2 PEGA domain CooC_C PF15976.5 gi|16081971|ref|NP_394381.1| - 0.0079 16.2 0.0 0.033 14.2 0.0 2.1 1 0 0 1 1 1 1 CS1-pili formation C-terminal DUF3823 PF12866.7 gi|16081971|ref|NP_394381.1| - 0.13 12.6 0.0 0.13 12.6 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3823) N-terminal domain DUF5591 PF17884.1 gi|16081972|ref|NP_394382.1| - 6.8e-41 139.7 0.2 1.2e-40 138.9 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) PUA PF01472.20 gi|16081972|ref|NP_394382.1| - 2.7e-09 36.8 0.6 7.4e-09 35.4 0.6 1.8 1 0 0 1 1 1 1 PUA domain TGT PF01702.18 gi|16081972|ref|NP_394382.1| - 0.00033 19.9 0.0 0.016 14.4 0.0 2.1 1 1 1 2 2 2 2 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.6 gi|16081972|ref|NP_394382.1| - 0.17 12.1 0.2 2.1 8.6 0.0 2.9 3 1 0 3 3 3 0 Patch-forming domain C2 of tRNA-guanine transglycosylase DUF3875 PF12991.7 gi|16081973|ref|NP_394383.1| - 0.014 15.4 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3875) Flg_hook PF02120.16 gi|16081973|ref|NP_394383.1| - 0.051 13.5 0.1 0.081 12.8 0.1 1.5 1 1 0 1 1 1 0 Flagellar hook-length control protein FliK Met_10 PF02475.16 gi|16081974|ref|NP_394384.1| - 4.9e-45 153.7 0.0 8.9e-45 152.9 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|16081974|ref|NP_394384.1| - 2e-08 34.0 0.8 4.5e-08 32.8 0.8 1.6 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_25 PF13649.6 gi|16081974|ref|NP_394384.1| - 1.6e-05 25.5 0.0 3.1e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|16081974|ref|NP_394384.1| - 1.6e-05 24.5 0.0 2.4e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.16 gi|16081974|ref|NP_394384.1| - 8e-05 22.0 0.0 9.4e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.6 gi|16081974|ref|NP_394384.1| - 8.1e-05 22.5 0.0 0.00014 21.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|16081974|ref|NP_394384.1| - 0.00018 21.0 0.0 0.00026 20.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 gi|16081974|ref|NP_394384.1| - 0.00026 20.6 0.0 0.00041 20.0 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 gi|16081974|ref|NP_394384.1| - 0.0023 18.6 0.0 0.0042 17.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|16081974|ref|NP_394384.1| - 0.044 13.7 0.0 0.082 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16081974|ref|NP_394384.1| - 0.05 14.3 0.0 0.085 13.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|16081974|ref|NP_394384.1| - 0.073 12.1 0.0 0.12 11.3 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase LSM PF01423.22 gi|16081975|ref|NP_394385.1| - 1.7e-21 75.7 2.3 1.8e-21 75.6 2.3 1.0 1 0 0 1 1 1 1 LSM domain PspC PF04024.12 gi|16081975|ref|NP_394385.1| - 0.13 12.1 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 PspC domain SART-1 PF03343.13 gi|16081975|ref|NP_394385.1| - 0.27 9.7 0.8 0.28 9.7 0.8 1.0 1 0 0 1 1 1 0 SART-1 family ASL_C PF08328.11 gi|16081976|ref|NP_394386.1| - 0.017 15.2 0.0 0.019 15.1 0.0 1.1 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal DUF1043 PF06295.12 gi|16081976|ref|NP_394386.1| - 0.027 14.5 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) APC_N_CC PF16689.5 gi|16081976|ref|NP_394386.1| - 0.034 14.2 0.4 0.056 13.5 0.4 1.4 1 1 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain SlyX PF04102.12 gi|16081976|ref|NP_394386.1| - 0.075 13.7 0.2 0.1 13.3 0.2 1.1 1 0 0 1 1 1 0 SlyX Helo_like_N PF17111.5 gi|16081976|ref|NP_394386.1| - 0.087 12.2 0.1 0.096 12.0 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins FlxA PF14282.6 gi|16081976|ref|NP_394386.1| - 0.16 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 FlxA-like protein ECR1_N PF14382.6 gi|16081977|ref|NP_394387.1| - 1.1e-07 31.6 0.0 2.4e-07 30.4 0.0 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region Rho_RNA_bind PF07497.12 gi|16081977|ref|NP_394387.1| - 0.043 13.7 0.1 0.55 10.1 0.1 2.4 2 0 0 2 2 2 0 Rho termination factor, RNA-binding domain zinc-ribbons_6 PF07191.12 gi|16081977|ref|NP_394387.1| - 0.045 13.7 1.5 0.071 13.1 1.5 1.3 1 0 0 1 1 1 0 zinc-ribbons Auto_anti-p27 PF06677.12 gi|16081977|ref|NP_394387.1| - 0.17 12.1 1.3 0.26 11.5 1.3 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-B_box PF00643.24 gi|16081977|ref|NP_394387.1| - 0.31 11.2 2.5 0.72 10.1 2.5 1.6 1 1 0 1 1 1 0 B-box zinc finger ArsR PF09824.9 gi|16081978|ref|NP_394388.1| - 3.7e-58 195.6 0.1 4.2e-58 195.4 0.1 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator DUF4127 PF13552.6 gi|16081978|ref|NP_394388.1| - 0.0093 14.6 0.0 0.011 14.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4127) Trm56 PF01994.16 gi|16081979|ref|NP_394389.1| - 2.9e-44 149.8 0.0 4.7e-44 149.1 0.0 1.3 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 HD PF01966.22 gi|16081979|ref|NP_394389.1| - 2.8e-13 50.2 0.9 2.8e-13 50.2 0.9 1.7 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 gi|16081979|ref|NP_394389.1| - 0.029 13.8 0.1 0.83 9.1 0.0 2.1 1 1 1 2 2 2 0 HDOD domain PseudoU_synth_1 PF01416.20 gi|16082568|ref|NP_394390.1| - 6.7e-17 61.9 0.1 1e-12 48.5 0.1 3.0 2 1 0 2 2 2 2 tRNA pseudouridine synthase MFS_1 PF07690.16 gi|16081980|ref|NP_394391.1| - 1.5e-31 109.6 46.6 2.1e-31 109.2 46.6 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Peptidase_M20 PF01546.28 gi|16082569|ref|NP_394392.1| - 2e-32 112.6 0.0 2.4e-32 112.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|16082569|ref|NP_394392.1| - 2.6e-18 65.9 0.0 5.7e-18 64.8 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|16082569|ref|NP_394392.1| - 5.2e-06 26.3 0.0 8.7e-06 25.6 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M28 DUF441 PF04284.13 gi|16081981|ref|NP_394393.1| - 0.00093 19.2 3.1 0.00093 19.2 3.1 1.9 1 1 1 2 2 2 2 Protein of unknown function (DUF441) HAD PF12710.7 gi|16081982|ref|NP_394394.1| - 2.3e-11 44.4 0.0 3e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|16081982|ref|NP_394394.1| - 2.3e-08 34.6 0.0 0.0014 18.9 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|16081982|ref|NP_394394.1| - 1.6e-07 31.6 0.0 5.4e-07 29.9 0.0 1.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|16081982|ref|NP_394394.1| - 0.0003 20.6 0.1 0.031 14.0 0.0 2.3 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase UMPH-1 PF05822.12 gi|16081982|ref|NP_394394.1| - 0.028 13.9 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) ThrE_2 PF12821.7 gi|16081982|ref|NP_394394.1| - 0.23 11.6 0.0 0.36 11.0 0.0 1.2 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE tRNA-synt_2b PF00587.25 gi|16081983|ref|NP_394395.1| - 2.5e-26 92.7 0.2 8e-26 91.1 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|16081983|ref|NP_394395.1| - 4.6e-19 68.4 0.0 1e-18 67.3 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|16081983|ref|NP_394395.1| - 1.1e-11 44.8 0.4 2.4e-11 43.7 0.4 1.6 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal WG_beta_rep PF14903.6 gi|16081983|ref|NP_394395.1| - 0.07 13.4 0.8 0.33 11.3 0.0 2.6 3 0 0 3 3 3 0 WG containing repeat Ta0938 PF11494.8 gi|16081984|ref|NP_394396.1| - 2.2e-52 175.7 1.2 2.5e-52 175.6 1.2 1.0 1 0 0 1 1 1 1 Ta0938 DUF4982 PF16355.5 gi|16081984|ref|NP_394396.1| - 0.017 15.1 0.0 1.6 8.7 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4982) DUF1186 PF06685.11 gi|16081984|ref|NP_394396.1| - 0.15 11.4 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1186) TENA_THI-4 PF03070.16 gi|16081985|ref|NP_394397.1| - 1.1e-56 192.0 0.0 1.5e-56 191.6 0.0 1.2 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Haem_oxygenas_2 PF14518.6 gi|16081985|ref|NP_394397.1| - 6.9e-12 45.5 0.1 1.2e-11 44.7 0.1 1.4 1 0 0 1 1 1 1 Iron-containing redox enzyme zf-C2H2_9 PF16293.5 gi|16081985|ref|NP_394397.1| - 7.1e-06 25.8 0.0 1.4e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 C2H2 type zinc-finger (1 copy) TFIIB PF00382.19 gi|16081986|ref|NP_394398.1| - 3.3e-41 139.2 3.5 2.1e-20 72.5 0.3 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|16081986|ref|NP_394398.1| - 5.5e-21 73.8 1.1 8.9e-21 73.1 1.1 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding RB_B PF01857.20 gi|16081986|ref|NP_394398.1| - 0.00025 21.1 0.0 0.0019 18.2 0.0 2.2 1 1 1 2 2 2 1 Retinoblastoma-associated protein B domain Cyclin_C PF02984.19 gi|16081986|ref|NP_394398.1| - 0.0017 18.4 0.0 0.51 10.4 0.0 2.5 1 1 1 2 2 2 1 Cyclin, C-terminal domain Cyclin_N PF00134.23 gi|16081986|ref|NP_394398.1| - 0.0022 17.7 0.1 0.072 12.8 0.0 2.5 1 1 1 2 2 2 1 Cyclin, N-terminal domain HTH_AsnC-type PF13404.6 gi|16081986|ref|NP_394398.1| - 0.006 16.4 0.2 0.016 15.0 0.2 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|16081986|ref|NP_394398.1| - 0.006 16.1 1.1 0.03 13.9 0.5 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 DUF3053 PF11254.8 gi|16081986|ref|NP_394398.1| - 0.016 14.8 0.1 0.032 13.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3053) Lar_restr_allev PF14354.6 gi|16081986|ref|NP_394398.1| - 0.019 15.3 0.3 0.042 14.2 0.3 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar AAA_lid_9 PF17871.1 gi|16081986|ref|NP_394398.1| - 0.025 14.5 0.6 0.073 13.0 0.1 2.0 2 0 0 2 2 2 0 AAA lid domain A2L_zn_ribbon PF08792.10 gi|16081986|ref|NP_394398.1| - 0.025 14.3 1.8 0.65 9.8 2.2 2.3 1 1 1 2 2 2 0 A2L zinc ribbon domain UPF0253 PF06786.12 gi|16081986|ref|NP_394398.1| - 0.035 14.4 0.3 0.16 12.3 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) HTH_Tnp_ISL3 PF13542.6 gi|16081986|ref|NP_394398.1| - 0.035 13.5 0.3 0.081 12.4 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Zn-ribbon_8 PF09723.10 gi|16081986|ref|NP_394398.1| - 0.06 13.5 2.3 0.72 10.0 0.3 2.4 1 1 1 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|16081986|ref|NP_394398.1| - 0.074 12.5 3.0 0.44 10.0 3.0 2.0 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S27e PF01667.17 gi|16081986|ref|NP_394398.1| - 0.1 12.3 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.7 gi|16081986|ref|NP_394398.1| - 0.11 12.5 0.3 0.26 11.3 0.3 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-ACC PF17848.1 gi|16081986|ref|NP_394398.1| - 0.17 12.0 2.8 2.4 8.3 1.7 2.8 2 1 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Auto_anti-p27 PF06677.12 gi|16081986|ref|NP_394398.1| - 0.29 11.3 0.9 0.57 10.4 0.9 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-RING_7 PF02591.15 gi|16081986|ref|NP_394398.1| - 0.38 11.0 2.0 0.53 10.5 0.1 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-RRN7 PF11781.8 gi|16081986|ref|NP_394398.1| - 0.42 10.3 5.0 2.8 7.7 5.0 2.1 1 1 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zinc_ribbon_2 PF13240.6 gi|16081986|ref|NP_394398.1| - 0.63 9.8 4.0 7.2 6.5 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain DUF1451 PF07295.11 gi|16081986|ref|NP_394398.1| - 6.6 6.8 7.4 1.7 8.7 0.2 2.9 2 1 1 3 3 3 0 Zinc-ribbon containing domain Gar1 PF04410.14 gi|16082652|ref|NP_394399.1| - 1e-06 28.6 0.0 1.1e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region NOG1_N PF17835.1 gi|16081987|ref|NP_394400.1| - 9.1e-42 142.7 1.4 1.5e-41 142.0 1.4 1.3 1 0 0 1 1 1 1 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|16081987|ref|NP_394400.1| - 3.1e-19 69.1 0.0 6e-19 68.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|16081987|ref|NP_394400.1| - 5.8e-17 61.2 0.1 1.5e-16 59.9 0.1 1.8 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|16081987|ref|NP_394400.1| - 1.7e-08 34.1 0.0 2.8e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|16081987|ref|NP_394400.1| - 0.00011 21.9 0.2 0.069 12.7 0.1 3.1 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 gi|16081987|ref|NP_394400.1| - 0.0032 16.9 0.0 0.0051 16.3 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|16081987|ref|NP_394400.1| - 0.021 14.8 0.2 0.18 11.7 0.1 2.6 2 1 0 2 2 2 0 RsgA GTPase Ras PF00071.22 gi|16081987|ref|NP_394400.1| - 0.074 12.6 0.1 0.39 10.3 0.0 2.1 2 1 0 2 2 2 0 Ras family DUF2100 PF09873.9 gi|16081987|ref|NP_394400.1| - 0.1 12.4 1.9 24 4.7 0.0 3.3 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2100) Dynamin_N PF00350.23 gi|16081987|ref|NP_394400.1| - 0.3 11.1 2.4 16 5.5 0.0 2.8 2 2 1 3 3 3 0 Dynamin family Nbl1_Borealin_N PF10444.9 gi|16081987|ref|NP_394400.1| - 3.3 7.4 5.4 13 5.5 0.2 3.4 3 0 0 3 3 3 0 Nbl1 / Borealin N terminal tRNA-synt_1c PF00749.21 gi|16081988|ref|NP_394401.1| - 1.1e-64 218.3 0.0 1.5e-64 217.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|16081988|ref|NP_394401.1| - 1.3e-20 74.0 0.0 3.3e-20 72.7 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain PRC PF05239.16 gi|16081989|ref|NP_394402.1| - 5.2e-17 61.7 2.8 6.2e-17 61.4 2.8 1.1 1 0 0 1 1 1 1 PRC-barrel domain MlaD PF02470.20 gi|16081989|ref|NP_394402.1| - 0.0027 17.9 0.2 0.0032 17.7 0.2 1.2 1 0 0 1 1 1 1 MlaD protein GATase PF00117.28 gi|16082570|ref|NP_394403.1| - 2e-37 128.8 0.0 2.5e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|16082570|ref|NP_394403.1| - 4.7e-09 36.3 0.9 1.2e-06 28.4 0.1 2.6 1 1 1 2 2 2 2 Peptidase C26 GATase_3 PF07685.14 gi|16082570|ref|NP_394403.1| - 0.0057 16.3 0.1 0.034 13.7 0.1 2.1 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 gi|16082570|ref|NP_394403.1| - 0.01 15.7 0.0 0.065 13.1 0.0 2.0 1 1 0 1 1 1 0 SNO glutamine amidotransferase family DJ-1_PfpI PF01965.24 gi|16082570|ref|NP_394403.1| - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family TFIIB PF00382.19 gi|16081990|ref|NP_394404.1| - 5.1e-36 122.6 3.1 3.5e-17 62.2 0.4 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|16081990|ref|NP_394404.1| - 1.5e-19 69.2 0.4 2.7e-19 68.4 0.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|16081990|ref|NP_394404.1| - 2.8e-05 23.6 0.5 0.0018 17.7 0.1 3.4 3 1 1 4 4 4 1 Sigma-70, region 4 Cyclin_C PF02984.19 gi|16081990|ref|NP_394404.1| - 0.00023 21.3 0.0 0.033 14.3 0.0 2.3 1 1 1 2 2 2 1 Cyclin, C-terminal domain Cyclin_N PF00134.23 gi|16081990|ref|NP_394404.1| - 0.00093 18.9 0.0 0.59 9.9 0.0 2.2 2 0 0 2 2 2 2 Cyclin, N-terminal domain RB_B PF01857.20 gi|16081990|ref|NP_394404.1| - 0.0013 18.7 0.0 0.0031 17.5 0.0 1.6 2 0 0 2 2 1 1 Retinoblastoma-associated protein B domain Sigma70_r4_2 PF08281.12 gi|16081990|ref|NP_394404.1| - 0.0026 17.4 2.2 0.017 14.7 0.3 3.0 2 1 1 3 3 3 1 Sigma-70, region 4 PhnA_Zn_Ribbon PF08274.12 gi|16081990|ref|NP_394404.1| - 0.028 14.4 1.8 0.028 14.4 1.8 1.8 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 gi|16081990|ref|NP_394404.1| - 0.041 14.3 0.9 0.071 13.5 0.3 1.8 2 0 0 2 2 1 0 Restriction alleviation protein Lar A2L_zn_ribbon PF08792.10 gi|16081990|ref|NP_394404.1| - 0.048 13.4 0.6 0.048 13.4 0.6 2.2 2 1 0 2 2 2 0 A2L zinc ribbon domain zf-NADH-PPase PF09297.11 gi|16081990|ref|NP_394404.1| - 0.07 12.8 0.7 0.67 9.7 0.1 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_S27e PF01667.17 gi|16081990|ref|NP_394404.1| - 0.085 12.6 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 HTH_36 PF13730.6 gi|16081990|ref|NP_394404.1| - 0.12 12.4 0.6 3.8 7.6 0.1 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|16081990|ref|NP_394404.1| - 0.13 12.1 0.8 5.5 6.9 0.1 3.0 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB TMIE PF16038.5 gi|16081990|ref|NP_394404.1| - 0.15 11.9 1.8 0.91 9.4 0.2 2.5 2 1 0 2 2 2 0 TMIE protein zf-DNL PF05180.12 gi|16081990|ref|NP_394404.1| - 0.16 11.9 0.7 0.45 10.5 0.7 1.7 1 0 0 1 1 1 0 DNL zinc finger Zn_Tnp_IS1595 PF12760.7 gi|16081990|ref|NP_394404.1| - 0.17 11.9 0.6 0.38 10.8 0.6 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain GerE PF00196.19 gi|16081990|ref|NP_394404.1| - 0.19 11.3 0.6 3.3 7.3 0.8 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, luxR family zf-trcl PF13451.6 gi|16081990|ref|NP_394404.1| - 0.25 11.2 2.2 7.2 6.6 0.3 2.4 2 0 0 2 2 2 0 Probable zinc-ribbon domain HTH_23 PF13384.6 gi|16081990|ref|NP_394404.1| - 0.26 11.1 5.4 5 7.0 0.1 4.0 3 1 1 4 4 4 0 Homeodomain-like domain zf-ribbon_3 PF13248.6 gi|16081990|ref|NP_394404.1| - 0.36 10.3 4.6 0.95 9.0 3.0 2.4 2 1 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16081990|ref|NP_394404.1| - 0.59 10.3 3.2 5.8 7.1 0.7 2.4 1 1 1 2 2 2 0 Zinc ribbon domain zf-ACC PF17848.1 gi|16081990|ref|NP_394404.1| - 1.4 9.1 5.2 21 5.3 0.0 3.5 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 gi|16081990|ref|NP_394404.1| - 3.4 7.3 4.9 20 4.9 0.0 3.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger tRNA-synt_2 PF00152.20 gi|16081991|ref|NP_394405.1| - 8.2e-94 314.2 0.1 1e-93 313.9 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|16081991|ref|NP_394405.1| - 5.6e-11 42.3 0.7 9.6e-11 41.5 0.7 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|16081991|ref|NP_394405.1| - 3e-06 26.9 0.1 0.0017 17.9 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) 3HCDH_N PF02737.18 gi|16081992|ref|NP_394406.1| - 1.1e-50 172.1 1.1 4.2e-37 127.8 0.1 2.3 1 1 1 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|16081992|ref|NP_394406.1| - 2.5e-34 117.8 0.1 5.8e-34 116.6 0.1 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|16081992|ref|NP_394406.1| - 0.00085 18.7 0.2 0.0014 18.1 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|16081992|ref|NP_394406.1| - 0.0017 18.3 0.0 0.0029 17.6 0.0 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|16081992|ref|NP_394406.1| - 0.003 18.1 0.6 0.012 16.2 0.6 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|16081992|ref|NP_394406.1| - 0.008 16.4 0.9 0.021 15.0 0.3 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase She9_MDM33 PF05546.11 gi|16081992|ref|NP_394406.1| - 0.052 13.3 0.1 0.083 12.7 0.1 1.3 1 0 0 1 1 1 0 She9 / Mdm33 family PglD_N PF17836.1 gi|16081992|ref|NP_394406.1| - 0.059 14.0 1.0 0.24 12.1 0.5 2.2 1 1 1 2 2 2 0 PglD N-terminal domain ThiF PF00899.21 gi|16081992|ref|NP_394406.1| - 0.42 9.9 1.6 1.7 7.9 1.6 2.0 1 1 0 1 1 1 0 ThiF family HTH_3 PF01381.22 gi|16081993|ref|NP_394408.1| - 2.9e-10 40.1 0.3 4.3e-10 39.5 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|16081993|ref|NP_394408.1| - 2.2e-05 24.4 0.4 3.9e-05 23.6 0.4 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C4_ClpX PF06689.13 gi|16081993|ref|NP_394408.1| - 0.0014 18.5 1.0 0.0024 17.7 1.0 1.4 1 0 0 1 1 1 1 ClpX C4-type zinc finger DUF4428 PF14471.6 gi|16081993|ref|NP_394408.1| - 0.004 17.0 3.3 0.0072 16.2 3.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) HTH_31 PF13560.6 gi|16081993|ref|NP_394408.1| - 0.0044 17.3 0.0 0.0062 16.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|16081993|ref|NP_394408.1| - 0.025 14.5 0.9 0.038 13.9 0.2 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Zn-ribbon_8 PF09723.10 gi|16081993|ref|NP_394408.1| - 0.067 13.3 0.5 0.13 12.4 0.5 1.5 1 0 0 1 1 1 0 Zinc ribbon domain Fibrillarin PF01269.17 gi|16081994|ref|NP_394409.1| - 1.8e-64 217.0 0.1 2e-64 216.8 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin DUF4193 PF13834.6 gi|16081994|ref|NP_394409.1| - 0.16 12.5 0.0 0.24 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4193) PTPS PF01242.19 gi|16081995|ref|NP_394410.1| - 1.8e-25 89.3 0.0 2.3e-25 89.0 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase SUB1_ProdP9 PF18213.1 gi|16081995|ref|NP_394410.1| - 0.066 13.1 0.0 1.7 8.5 0.0 2.4 2 0 0 2 2 2 0 SUB1 protease Prodomain ProdP9 QueC PF06508.13 gi|16081996|ref|NP_394411.1| - 8.8e-79 263.9 0.0 1.1e-78 263.5 0.0 1.1 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|16081996|ref|NP_394411.1| - 3.7e-08 33.4 0.0 4.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase PAPS_reduct PF01507.19 gi|16081996|ref|NP_394411.1| - 4.6e-06 26.8 0.0 4.5e-05 23.6 0.0 2.0 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|16081996|ref|NP_394411.1| - 0.00033 20.3 0.0 0.00064 19.4 0.0 1.5 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) Arginosuc_synth PF00764.19 gi|16081996|ref|NP_394411.1| - 0.0055 16.1 0.0 0.0075 15.6 0.0 1.2 1 0 0 1 1 1 1 Arginosuccinate synthase tRNA_Me_trans PF03054.16 gi|16081996|ref|NP_394411.1| - 0.015 14.1 0.0 0.021 13.6 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase NAD_synthase PF02540.17 gi|16081996|ref|NP_394411.1| - 0.017 14.2 0.0 0.035 13.2 0.0 1.5 2 0 0 2 2 2 0 NAD synthase ATP_bind_3 PF01171.20 gi|16081996|ref|NP_394411.1| - 0.028 14.2 0.0 0.053 13.3 0.0 1.5 2 0 0 2 2 2 0 PP-loop family HTH_11 PF08279.12 gi|16081996|ref|NP_394411.1| - 0.067 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 HTH domain Ldh_1_N PF00056.23 gi|16081997|ref|NP_394412.1| - 1.2e-38 132.4 0.1 1.8e-38 131.8 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|16081997|ref|NP_394412.1| - 3.4e-25 88.9 0.0 4.8e-25 88.4 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|16081997|ref|NP_394412.1| - 0.00033 20.3 0.0 0.00088 18.9 0.0 1.7 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Shikimate_DH PF01488.20 gi|16081997|ref|NP_394412.1| - 0.021 14.9 0.6 0.056 13.5 0.1 2.0 2 1 1 3 3 3 0 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|16081997|ref|NP_394412.1| - 0.034 13.7 3.6 0.054 13.1 2.0 2.1 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_8 PF13450.6 gi|16081997|ref|NP_394412.1| - 0.035 14.3 0.0 0.098 12.9 0.0 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|16081997|ref|NP_394412.1| - 0.06 12.9 0.1 0.53 9.8 0.2 2.2 2 1 0 2 2 2 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|16081997|ref|NP_394412.1| - 0.076 12.9 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PEP_hydrolase PF09370.10 gi|16081997|ref|NP_394412.1| - 0.077 12.2 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoenolpyruvate hydrolase-like NAD_binding_2 PF03446.15 gi|16081997|ref|NP_394412.1| - 0.08 13.1 0.1 21 5.3 0.0 2.6 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|16081997|ref|NP_394412.1| - 0.14 11.5 0.1 0.26 10.6 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|16081997|ref|NP_394412.1| - 0.14 12.1 0.1 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|16081997|ref|NP_394412.1| - 0.15 12.6 0.5 0.5 11.0 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GvpD PF07088.11 gi|16082571|ref|NP_394413.1| - 1.2e-182 607.8 1.9 1.5e-182 607.6 1.9 1.0 1 0 0 1 1 1 1 GvpD gas vesicle protein ATPase PF06745.13 gi|16082571|ref|NP_394413.1| - 5.3e-09 35.8 0.1 3.9e-08 32.9 0.1 2.1 1 1 0 1 1 1 1 KaiC AAA_16 PF13191.6 gi|16082571|ref|NP_394413.1| - 0.0015 18.9 0.0 0.0028 18.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|16082571|ref|NP_394413.1| - 0.03 14.2 0.7 0.077 12.9 0.1 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|16082571|ref|NP_394413.1| - 0.035 13.8 0.1 0.13 12.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|16082571|ref|NP_394413.1| - 0.039 14.2 0.0 0.14 12.4 0.0 2.0 3 0 0 3 3 3 0 AAA domain Pox_A32 PF04665.12 gi|16082571|ref|NP_394413.1| - 0.052 13.0 0.0 0.096 12.1 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein DUF3562 PF12085.8 gi|16082571|ref|NP_394413.1| - 0.13 11.8 0.0 2.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) DUF2075 PF09848.9 gi|16082571|ref|NP_394413.1| - 0.13 11.4 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 gi|16082571|ref|NP_394413.1| - 0.14 12.0 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_11 PF13086.6 gi|16082571|ref|NP_394413.1| - 0.24 11.1 0.0 0.37 10.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain AhpC-TSA PF00578.21 gi|16082572|ref|NP_394414.1| - 1.5e-40 138.0 0.0 1.9e-40 137.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|16082572|ref|NP_394414.1| - 8.2e-21 74.3 0.0 1.1e-20 73.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|16082572|ref|NP_394414.1| - 1.5e-08 34.4 0.1 2.5e-08 33.6 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin ALAD PF00490.21 gi|16081998|ref|NP_394415.1| - 4.5e-135 449.9 0.4 5.1e-135 449.7 0.4 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase TA0956 PF11513.8 gi|16081999|ref|NP_394416.1| - 4.7e-52 174.8 4.5 5.2e-52 174.7 4.5 1.0 1 0 0 1 1 1 1 Thermoplasma acidophilum protein TA0956 Acetyltransf_19 PF18015.1 gi|16081999|ref|NP_394416.1| - 0.011 16.0 0.1 0.052 13.8 0.0 2.1 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain MsyB PF13984.6 gi|16082000|ref|NP_394417.1| - 0.09 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 MsyB protein Proton_antipo_M PF00361.20 gi|16082002|ref|NP_394419.1| - 1.9e-49 168.4 35.1 1.9e-49 168.4 35.1 2.8 2 1 1 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 gi|16082003|ref|NP_394420.1| - 7.6e-48 163.2 31.1 7.6e-48 163.2 31.1 2.2 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 gi|16082004|ref|NP_394421.1| - 5.7e-76 255.5 29.5 5.7e-76 255.5 29.5 2.5 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|16082004|ref|NP_394421.1| - 2.5e-14 53.1 6.0 2.5e-14 53.1 6.0 3.6 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF3539 PF12058.8 gi|16082004|ref|NP_394421.1| - 0.094 12.9 0.5 0.35 11.0 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3539) Oxidored_q2 PF00420.24 gi|16082005|ref|NP_394422.1| - 1e-20 73.3 9.1 1.2e-20 73.0 9.1 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q3 PF00499.20 gi|16082006|ref|NP_394423.1| - 1.4e-05 24.8 6.3 1.5e-05 24.7 6.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q3 PF00499.20 gi|16082007|ref|NP_394424.1| - 9.7e-13 48.1 11.4 9.7e-13 48.1 11.4 1.7 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Colicin_K PF17500.2 gi|16082007|ref|NP_394424.1| - 0.045 14.3 1.8 0.045 14.3 1.8 1.5 1 1 0 1 1 1 0 Colicin-K DUF4040 PF13244.6 gi|16082007|ref|NP_394424.1| - 0.4 10.8 11.4 0.74 10.0 11.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4040) Ost5 PF05251.12 gi|16082007|ref|NP_394424.1| - 7.8 6.8 16.1 1.9 8.8 10.9 1.9 1 1 1 2 2 2 0 Oligosaccharyltransferase subunit 5 SUR7 PF06687.12 gi|16082007|ref|NP_394424.1| - 8 6.0 14.6 11 5.6 14.6 1.3 1 0 0 1 1 1 0 SUR7/PalI family Fer4_7 PF12838.7 gi|16082008|ref|NP_394425.1| - 2.4e-12 47.2 33.6 1.2e-07 32.2 13.1 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16082008|ref|NP_394425.1| - 5.8e-12 44.9 10.8 6.1e-06 25.8 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16082008|ref|NP_394425.1| - 2.3e-09 38.0 5.0 0.00025 21.9 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|16082008|ref|NP_394425.1| - 2.9e-09 36.9 23.5 2.7e-06 27.4 12.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082008|ref|NP_394425.1| - 1.7e-08 34.5 7.8 3.1e-08 33.7 7.8 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16082008|ref|NP_394425.1| - 3.3e-08 34.0 3.2 0.0034 17.9 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082008|ref|NP_394425.1| - 7.5e-07 29.2 22.5 1.3e-05 25.2 12.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16082008|ref|NP_394425.1| - 1.5e-06 28.0 12.3 0.00098 19.1 2.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|16082008|ref|NP_394425.1| - 7.3e-06 25.8 11.6 0.0032 17.5 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|16082008|ref|NP_394425.1| - 1.2e-05 25.6 11.2 3.4e-05 24.2 11.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|16082008|ref|NP_394425.1| - 6.9e-05 23.6 1.4 0.14 13.0 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16082008|ref|NP_394425.1| - 0.003 17.9 10.3 0.13 12.9 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|16082008|ref|NP_394425.1| - 0.0079 16.4 10.8 0.23 11.7 1.3 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16082008|ref|NP_394425.1| - 0.017 16.0 17.2 0.067 14.2 5.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|16082008|ref|NP_394425.1| - 0.073 13.6 11.8 0.97 10.0 2.5 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I AFP PF02420.15 gi|16082008|ref|NP_394425.1| - 5.9 7.6 12.5 1.4 9.5 3.4 2.6 2 0 0 2 2 2 0 Insect antifreeze protein repeat NADHdh PF00146.21 gi|16082009|ref|NP_394426.1| - 2.1e-88 296.5 24.2 2.5e-88 296.3 24.2 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF3671 PF12420.8 gi|16082009|ref|NP_394426.1| - 8.8 6.4 13.0 1.3 9.2 5.8 2.7 2 1 0 2 2 2 0 Protein of unknown function Complex1_49kDa PF00346.19 gi|16082573|ref|NP_394427.1| - 4.2e-98 327.8 0.1 2.2e-95 318.9 0.0 2.8 2 1 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|16082573|ref|NP_394427.1| - 0.0028 16.6 0.0 0.027 13.4 0.0 2.2 2 1 1 3 3 3 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|16082010|ref|NP_394428.1| - 3.9e-38 130.8 0.1 4.6e-38 130.6 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|16082574|ref|NP_394429.1| - 1.3e-21 76.8 0.1 1.7e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|16082575|ref|NP_394430.1| - 8.2e-21 74.0 1.0 8.2e-21 74.0 1.0 1.7 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GatB_N PF02934.15 gi|16082011|ref|NP_394431.1| - 2.5e-59 200.9 0.0 4.6e-59 200.1 0.0 1.4 1 0 0 1 1 1 1 GatB/GatE catalytic domain GAD PF02938.14 gi|16082011|ref|NP_394431.1| - 8.5e-05 22.7 0.1 0.00042 20.5 0.0 2.3 2 0 0 2 2 2 1 GAD domain Asparaginase PF00710.20 gi|16082012|ref|NP_394432.1| - 3.1e-53 180.2 0.0 4.1e-53 179.8 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|16082012|ref|NP_394432.1| - 1.3e-21 77.0 0.1 5.5e-21 74.9 0.0 2.1 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|16082012|ref|NP_394432.1| - 1.4e-05 24.3 0.1 3.1e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 GatD N-terminal domain DUF72 PF01904.18 gi|16082013|ref|NP_394433.1| - 3e-50 171.4 0.0 3.4e-50 171.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Acyl-CoA_dh_1 PF00441.24 gi|16082014|ref|NP_394434.1| - 3.3e-50 170.2 6.1 4.4e-50 169.8 6.1 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|16082014|ref|NP_394434.1| - 2e-29 102.5 0.2 1.5e-28 99.7 0.0 2.4 2 1 1 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16082014|ref|NP_394434.1| - 2.4e-25 88.5 0.0 5.1e-25 87.5 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|16082014|ref|NP_394434.1| - 9.2e-25 87.5 2.8 1.4e-24 86.9 2.8 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DNA_primase_S PF01896.19 gi|16082576|ref|NP_394435.1| - 7.5e-29 101.0 0.0 1e-28 100.6 0.0 1.2 1 0 0 1 1 1 1 DNA primase small subunit Peptidase_S8 PF00082.22 gi|16082015|ref|NP_394436.1| - 2.9e-13 49.8 3.5 7.5e-13 48.4 3.5 1.6 1 0 0 1 1 1 1 Subtilase family CarbopepD_reg_2 PF13715.6 gi|16082015|ref|NP_394436.1| - 1.1e-05 25.4 4.4 0.0017 18.3 0.6 3.5 3 0 0 3 3 3 2 CarboxypepD_reg-like domain CarboxypepD_reg PF13620.6 gi|16082015|ref|NP_394436.1| - 0.00033 20.9 9.0 0.13 12.6 1.4 4.3 4 0 0 4 4 4 2 Carboxypeptidase regulatory-like domain PEGA PF08308.11 gi|16082015|ref|NP_394436.1| - 0.001 18.9 0.5 0.039 13.8 0.0 3.6 3 0 0 3 3 3 1 PEGA domain Meth_synt_2 PF01717.18 gi|16082016|ref|NP_394437.1| - 2.2e-37 129.1 0.0 4.8e-36 124.7 0.0 2.2 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain MTHFR PF02219.17 gi|16082017|ref|NP_394439.1| - 3.2e-19 69.3 0.1 5.5e-19 68.6 0.1 1.4 1 1 0 1 1 1 1 Methylenetetrahydrofolate reductase Cpn60_TCP1 PF00118.24 gi|16082018|ref|NP_394440.1| - 6.1e-186 618.8 23.3 7e-186 618.6 23.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dynein_C PF18199.1 gi|16082018|ref|NP_394440.1| - 0.08 12.1 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 Dynein heavy chain C-terminal domain Radical_SAM PF04055.21 gi|16082018|ref|NP_394440.1| - 0.11 12.9 0.2 4.8 7.5 0.0 2.8 2 0 0 2 2 2 0 Radical SAM superfamily TrwC PF08751.11 gi|16082018|ref|NP_394440.1| - 0.15 11.6 0.1 0.29 10.6 0.1 1.5 1 0 0 1 1 1 0 TrwC relaxase HTH_24 PF13412.6 gi|16082019|ref|NP_394441.1| - 3.6e-18 64.8 0.8 5.6e-18 64.2 0.8 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|16082019|ref|NP_394441.1| - 5.1e-15 55.0 0.1 9.9e-15 54.1 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|16082019|ref|NP_394441.1| - 9e-09 35.2 0.3 1.8e-08 34.2 0.3 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|16082019|ref|NP_394441.1| - 1.4e-06 28.1 0.2 2.4e-06 27.4 0.2 1.4 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|16082019|ref|NP_394441.1| - 4.5e-06 26.5 0.1 8.3e-06 25.6 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|16082019|ref|NP_394441.1| - 1e-05 25.1 0.2 0.00015 21.5 0.0 2.3 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|16082019|ref|NP_394441.1| - 1.9e-05 24.1 0.2 6.4e-05 22.4 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|16082019|ref|NP_394441.1| - 3.1e-05 24.1 0.0 5.1e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.12 gi|16082019|ref|NP_394441.1| - 4e-05 23.3 0.3 7.7e-05 22.4 0.3 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_Mga PF08280.11 gi|16082019|ref|NP_394441.1| - 4.1e-05 23.5 0.0 6.8e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain GerE PF00196.19 gi|16082019|ref|NP_394441.1| - 5e-05 22.8 0.1 8.7e-05 22.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|16082019|ref|NP_394441.1| - 6e-05 22.6 0.1 0.0002 20.9 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_5 PF01022.20 gi|16082019|ref|NP_394441.1| - 0.0001 22.1 0.0 0.00014 21.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|16082019|ref|NP_394441.1| - 0.00014 21.7 0.0 0.00025 20.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|16082019|ref|NP_394441.1| - 0.00053 19.9 0.0 0.0011 18.9 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|16082019|ref|NP_394441.1| - 0.0007 19.4 0.1 0.001 18.9 0.1 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|16082019|ref|NP_394441.1| - 0.0015 18.6 0.0 0.0023 17.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain RepL PF05732.11 gi|16082019|ref|NP_394441.1| - 0.0026 17.2 0.3 0.0029 17.0 0.3 1.2 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_12 PF08461.10 gi|16082019|ref|NP_394441.1| - 0.0032 17.4 0.2 0.0076 16.2 0.2 1.7 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain TFIIE_alpha PF02002.17 gi|16082019|ref|NP_394441.1| - 0.0039 17.0 2.2 0.014 15.2 2.2 1.9 1 1 0 1 1 1 1 TFIIE alpha subunit HTH_28 PF13518.6 gi|16082019|ref|NP_394441.1| - 0.0068 16.5 0.1 0.07 13.3 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Phage_terminase PF10668.9 gi|16082019|ref|NP_394441.1| - 0.007 16.4 0.1 0.015 15.2 0.1 1.7 1 0 0 1 1 1 1 Phage terminase small subunit Stk19 PF10494.9 gi|16082019|ref|NP_394441.1| - 0.013 15.2 0.3 0.014 15.1 0.3 1.1 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 HrcA_DNA-bdg PF03444.15 gi|16082019|ref|NP_394441.1| - 0.018 14.7 0.7 0.033 13.8 0.3 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_38 PF13936.6 gi|16082019|ref|NP_394441.1| - 0.02 14.6 0.1 0.036 13.8 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|16082019|ref|NP_394441.1| - 0.021 14.9 0.6 0.066 13.2 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn helix NapD PF03927.13 gi|16082019|ref|NP_394441.1| - 0.028 14.5 0.1 0.078 13.0 0.0 1.8 2 1 0 2 2 2 0 NapD protein HTH_45 PF14947.6 gi|16082019|ref|NP_394441.1| - 0.029 14.4 0.1 0.057 13.4 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_41 PF14502.6 gi|16082019|ref|NP_394441.1| - 0.032 13.9 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|16082019|ref|NP_394441.1| - 0.037 14.5 0.2 0.065 13.7 0.1 1.5 1 1 1 2 2 1 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|16082019|ref|NP_394441.1| - 0.04 13.9 0.0 0.069 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|16082019|ref|NP_394441.1| - 0.047 14.2 0.2 0.13 12.8 0.1 1.8 1 1 0 1 1 1 0 Winged helix DNA-binding domain Put_DNA-bind_N PF06971.13 gi|16082019|ref|NP_394441.1| - 0.047 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_Tnp_ISL3 PF13542.6 gi|16082019|ref|NP_394441.1| - 0.076 12.4 0.1 0.24 10.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 PAX PF00292.18 gi|16082019|ref|NP_394441.1| - 0.08 12.9 0.0 0.096 12.6 0.0 1.3 1 1 0 1 1 1 0 'Paired box' domain Rrf2 PF02082.20 gi|16082019|ref|NP_394441.1| - 0.089 13.2 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator GntR PF00392.21 gi|16082019|ref|NP_394441.1| - 0.099 12.3 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Trp_halogenase PF04820.14 gi|16082021|ref|NP_394443.1| - 0.00056 18.9 0.0 0.17 10.7 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_8 PF13450.6 gi|16082021|ref|NP_394443.1| - 0.011 15.9 0.0 0.026 14.7 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|16082021|ref|NP_394443.1| - 0.045 13.0 0.0 0.12 11.6 0.0 1.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|16082022|ref|NP_394444.1| - 4.3e-52 177.2 7.5 5e-52 177.0 7.5 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|16082022|ref|NP_394444.1| - 3.8e-29 101.9 10.4 1.4e-25 90.2 2.8 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082022|ref|NP_394444.1| - 3.1e-14 53.3 8.7 3.2e-13 50.0 0.3 3.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|16082022|ref|NP_394444.1| - 2e-13 49.8 10.3 4.1e-05 22.5 2.3 4.2 4 0 0 4 4 4 3 HI0933-like protein FAD_binding_2 PF00890.24 gi|16082022|ref|NP_394444.1| - 3.2e-13 49.6 16.0 5.9e-06 25.6 6.1 4.6 3 1 2 5 5 5 4 FAD binding domain FAD_oxidored PF12831.7 gi|16082022|ref|NP_394444.1| - 2.4e-10 40.4 8.4 1e-07 31.7 0.6 3.1 2 1 1 3 3 3 3 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|16082022|ref|NP_394444.1| - 3.9e-09 36.6 0.6 2.2e-05 24.6 1.2 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|16082022|ref|NP_394444.1| - 6.1e-09 35.9 15.4 3.9e-05 23.4 4.2 4.0 3 1 1 4 4 4 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|16082022|ref|NP_394444.1| - 1.1e-07 31.3 3.5 1.7e-06 27.4 0.3 2.9 3 1 1 4 4 4 1 Thi4 family FAD_binding_3 PF01494.19 gi|16082022|ref|NP_394444.1| - 6.6e-07 28.9 6.6 0.0016 17.7 0.4 3.6 3 1 1 4 4 4 2 FAD binding domain GIDA PF01134.22 gi|16082022|ref|NP_394444.1| - 2.6e-05 23.5 24.3 0.0003 20.0 4.2 4.5 3 2 1 5 5 5 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|16082022|ref|NP_394444.1| - 3.1e-05 23.4 4.6 0.0014 18.0 0.3 2.5 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|16082022|ref|NP_394444.1| - 0.00028 20.0 2.0 0.12 11.4 1.6 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_7 PF13241.6 gi|16082022|ref|NP_394444.1| - 0.00075 19.9 0.5 0.34 11.4 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding K_oxygenase PF13434.6 gi|16082022|ref|NP_394444.1| - 0.0015 17.8 2.7 0.2 10.8 0.1 3.1 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Trp_halogenase PF04820.14 gi|16082022|ref|NP_394444.1| - 0.0024 16.8 3.7 0.44 9.3 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase Amino_oxidase PF01593.24 gi|16082022|ref|NP_394444.1| - 0.0093 15.3 3.6 0.67 9.2 0.0 2.7 4 0 0 4 4 4 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|16082022|ref|NP_394444.1| - 0.017 15.1 1.8 4.8 7.2 0.0 3.0 3 0 0 3 3 3 0 FAD-NAD(P)-binding FMO-like PF00743.19 gi|16082022|ref|NP_394444.1| - 0.021 13.2 0.0 0.034 12.6 0.0 1.4 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like ThiF PF00899.21 gi|16082022|ref|NP_394444.1| - 0.024 14.0 0.0 0.054 12.8 0.0 1.5 1 0 0 1 1 1 0 ThiF family UDPG_MGDP_dh_N PF03721.14 gi|16082022|ref|NP_394444.1| - 0.025 14.2 4.3 0.66 9.5 0.7 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MCRA PF06100.11 gi|16082022|ref|NP_394444.1| - 0.048 12.5 1.0 2.3 6.9 0.1 2.2 2 0 0 2 2 2 0 MCRA family PALP PF00291.25 gi|16082022|ref|NP_394444.1| - 0.084 12.3 5.2 0.94 8.8 0.4 2.6 3 0 0 3 3 3 0 Pyridoxal-phosphate dependent enzyme 3HCDH_N PF02737.18 gi|16082022|ref|NP_394444.1| - 0.11 12.4 1.9 0.12 12.3 0.3 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TauE PF01925.19 gi|16082023|ref|NP_394445.1| - 2.7e-37 128.7 34.2 3.5e-37 128.3 34.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF998 PF06197.13 gi|16082024|ref|NP_394446.1| - 4.2e-33 114.5 7.7 5.1e-33 114.2 7.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) YfhO PF09586.10 gi|16082024|ref|NP_394446.1| - 0.018 13.3 5.2 0.02 13.1 5.2 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO CRM1_repeat PF18777.1 gi|16082024|ref|NP_394446.1| - 0.055 13.0 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat EcsB PF05975.12 gi|16082024|ref|NP_394446.1| - 0.59 8.9 8.1 0.051 12.4 2.5 1.8 2 0 0 2 2 2 0 Bacterial ABC transporter protein EcsB DUF2069 PF09842.9 gi|16082024|ref|NP_394446.1| - 2.6 8.3 7.9 8.5 6.6 3.5 2.7 2 1 1 3 3 3 0 Predicted membrane protein (DUF2069) DUF4282 PF14110.6 gi|16082024|ref|NP_394446.1| - 7.4 7.4 14.7 7.9 7.3 0.7 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4282) Amidinotransf PF02274.17 gi|16082025|ref|NP_394447.1| - 1.2e-42 146.3 0.1 3.1e-42 144.9 0.1 1.7 1 1 0 1 1 1 1 Amidinotransferase NMD3 PF04981.13 gi|16082026|ref|NP_394448.1| - 5.8e-42 143.8 0.1 8.4e-42 143.3 0.1 1.2 1 0 0 1 1 1 1 NMD3 family Yippee-Mis18 PF03226.14 gi|16082026|ref|NP_394448.1| - 0.035 14.3 1.5 0.15 12.2 1.0 2.3 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly MqsA_antitoxin PF15731.5 gi|16082026|ref|NP_394448.1| - 0.05 13.7 1.8 0.1 12.7 0.9 2.0 2 0 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA eIF-5_eIF-2B PF01873.17 gi|16082026|ref|NP_394448.1| - 0.09 12.7 1.7 3.1 7.7 0.0 2.8 2 0 0 2 2 2 0 Domain found in IF2B/IF5 zf-C6H2 PF15801.5 gi|16082026|ref|NP_394448.1| - 0.37 11.1 5.0 11 6.4 0.1 3.1 3 0 0 3 3 3 0 zf-MYND-like zinc finger, mRNA-binding zf-C4pol PF14260.6 gi|16082026|ref|NP_394448.1| - 0.59 10.6 5.3 15 6.1 3.1 2.9 2 1 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta TFIIS_C PF01096.18 gi|16082026|ref|NP_394448.1| - 0.9 9.5 5.2 40 4.2 0.0 3.6 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) DUF3797 PF12677.7 gi|16082026|ref|NP_394448.1| - 3.5 7.6 6.5 12 5.8 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF3797) Zn-ribbon_8 PF09723.10 gi|16082026|ref|NP_394448.1| - 6.4 7.0 6.7 37 4.6 3.7 3.0 2 1 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|16082026|ref|NP_394448.1| - 6.7 6.8 7.4 56 3.9 5.4 2.7 2 1 0 2 2 2 0 Double zinc ribbon Metallophos_2 PF12850.7 gi|16082027|ref|NP_394449.1| - 5.6e-27 94.9 0.0 6.8e-27 94.7 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|16082027|ref|NP_394449.1| - 2.2e-09 38.1 0.3 3e-09 37.7 0.3 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.11 gi|16082027|ref|NP_394449.1| - 0.00062 18.2 0.0 0.00076 17.9 0.0 1.1 1 0 0 1 1 1 1 Firmicute fructose-1,6-bisphosphatase zf-CSL PF05207.13 gi|16082027|ref|NP_394449.1| - 0.11 12.2 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 CSL zinc finger DUF72 PF01904.18 gi|16082028|ref|NP_394450.1| - 6.6e-57 193.1 0.0 7.4e-57 193.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 DUF1506 PF07405.11 gi|16082028|ref|NP_394450.1| - 0.0098 16.1 0.1 0.017 15.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1506) Thioredox_DsbH PF03190.15 gi|16082029|ref|NP_394451.1| - 1.8e-66 223.1 0.0 3.2e-66 222.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|16082029|ref|NP_394451.1| - 6e-07 29.6 0.0 1.3e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like Glyco_hydro_127 PF07944.12 gi|16082029|ref|NP_394451.1| - 0.00071 18.2 0.1 0.014 13.9 0.0 2.1 2 0 0 2 2 2 1 Beta-L-arabinofuranosidase, GH127 C5-epim_C PF06662.13 gi|16082029|ref|NP_394451.1| - 0.00075 19.0 3.3 1.2 8.6 0.0 3.1 3 0 0 3 3 3 2 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_76 PF03663.14 gi|16082029|ref|NP_394451.1| - 0.00089 18.9 1.7 0.12 11.8 0.1 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 76 DUF4962 PF16332.5 gi|16082029|ref|NP_394451.1| - 0.0094 14.5 0.2 0.037 12.5 0.0 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4962) DUF771 PF05595.11 gi|16082029|ref|NP_394451.1| - 0.065 13.2 0.1 4.4 7.3 0.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF771) Glyco_hydro_88 PF07470.13 gi|16082029|ref|NP_394451.1| - 0.13 11.3 4.8 0.71 8.9 0.2 3.0 2 2 1 3 3 3 0 Glycosyl Hydrolase Family 88 Cyt_bd_oxida_I PF01654.17 gi|16082030|ref|NP_394452.1| - 2.2e-91 306.6 22.2 2.5e-91 306.4 22.2 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I Cyt_bd_oxida_II PF02322.15 gi|16082031|ref|NP_394453.1| - 3.1e-05 23.5 36.8 4.2e-05 23.1 36.8 1.1 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Cortexin PF11057.8 gi|16082031|ref|NP_394453.1| - 0.014 15.2 1.7 0.014 15.2 1.7 2.2 2 0 0 2 2 2 0 Cortexin of kidney G_glu_transpept PF01019.21 gi|16082032|ref|NP_394454.1| - 7.8e-130 434.0 0.0 7.4e-129 430.8 0.0 1.9 1 1 0 1 1 1 1 Gamma-glutamyltranspeptidase PcrB PF01884.17 gi|16082033|ref|NP_394455.1| - 4.4e-53 180.0 0.1 5.5e-53 179.7 0.1 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|16082033|ref|NP_394455.1| - 6.5e-10 38.9 0.1 1.3e-09 37.8 0.0 1.5 2 0 0 2 2 2 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|16082033|ref|NP_394455.1| - 7.6e-06 25.4 1.2 0.00021 20.8 0.1 2.3 2 1 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 gi|16082033|ref|NP_394455.1| - 3e-05 23.3 0.3 0.00047 19.3 0.2 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 gi|16082033|ref|NP_394455.1| - 3.4e-05 23.3 0.1 0.0015 17.9 0.0 2.2 2 0 0 2 2 2 1 Thiamine monophosphate synthase Trp_syntA PF00290.20 gi|16082033|ref|NP_394455.1| - 5.9e-05 22.1 0.3 0.00013 20.9 0.2 1.6 2 0 0 2 2 2 1 Tryptophan synthase alpha chain IMPDH PF00478.25 gi|16082033|ref|NP_394455.1| - 8.4e-05 21.7 0.1 0.00067 18.8 0.0 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|16082033|ref|NP_394455.1| - 0.00055 19.2 0.1 0.00082 18.7 0.1 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NanE PF04131.14 gi|16082033|ref|NP_394455.1| - 0.00093 18.4 0.5 0.002 17.4 0.0 1.7 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase B12-binding PF02310.19 gi|16082033|ref|NP_394455.1| - 0.0017 18.4 0.2 0.046 13.7 0.1 2.2 2 0 0 2 2 2 1 B12 binding domain ThiG PF05690.14 gi|16082033|ref|NP_394455.1| - 0.0026 17.1 0.5 0.0044 16.4 0.1 1.5 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG Ribul_P_3_epim PF00834.19 gi|16082033|ref|NP_394455.1| - 0.0029 17.0 0.2 0.0071 15.7 0.2 1.6 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family FMN_dh PF01070.18 gi|16082033|ref|NP_394455.1| - 0.044 12.8 0.4 0.14 11.2 0.2 1.8 2 0 0 2 2 2 0 FMN-dependent dehydrogenase Nitro_FeMo-Co PF02579.17 gi|16082033|ref|NP_394455.1| - 0.08 13.3 0.1 0.27 11.6 0.0 1.9 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor NMO PF03060.15 gi|16082033|ref|NP_394455.1| - 0.085 12.2 1.3 0.15 11.4 0.6 1.7 2 0 0 2 2 2 0 Nitronate monooxygenase UbiA PF01040.18 gi|16082578|ref|NP_394456.1| - 8.8e-32 110.4 13.2 1.1e-31 110.0 13.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Tmemb_9 PF05434.11 gi|16082578|ref|NP_394456.1| - 7.1 6.5 4.9 20 5.1 0.1 2.4 2 0 0 2 2 2 0 TMEM9 TRM PF02005.16 gi|16082034|ref|NP_394457.1| - 8.3e-65 219.4 0.0 4.4e-63 213.7 0.0 2.7 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 gi|16082034|ref|NP_394457.1| - 0.00056 19.7 0.0 0.00085 19.1 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|16082034|ref|NP_394457.1| - 0.0024 17.5 0.0 0.0038 16.9 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|16082034|ref|NP_394457.1| - 0.068 12.7 0.0 0.17 11.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase small domain Vault_2 PF17794.1 gi|16082034|ref|NP_394457.1| - 0.15 12.5 0.0 0.27 11.6 0.0 1.4 1 0 0 1 1 1 0 Major Vault Protein repeat domain Methyltransf_16 PF10294.9 gi|16082034|ref|NP_394457.1| - 0.21 11.3 0.0 0.34 10.6 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase NTPase_1 PF03266.15 gi|16082035|ref|NP_394458.1| - 4.9e-47 159.9 3.2 5.6e-47 159.8 3.2 1.0 1 0 0 1 1 1 1 NTPase DUF2478 PF10649.9 gi|16082035|ref|NP_394458.1| - 5e-05 23.0 0.0 9.1e-05 22.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2478) AAA_5 PF07728.14 gi|16082035|ref|NP_394458.1| - 0.0043 17.1 0.2 0.014 15.4 0.2 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|16082035|ref|NP_394458.1| - 0.014 15.2 0.0 0.025 14.3 0.0 1.3 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|16082035|ref|NP_394458.1| - 0.049 13.9 0.1 0.078 13.2 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|16082035|ref|NP_394458.1| - 0.09 13.3 0.2 0.12 12.9 0.2 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|16082035|ref|NP_394458.1| - 0.091 12.5 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DHNA PF04038.12 gi|16082579|ref|NP_394459.1| - 4.2e-40 136.6 0.1 4.7e-40 136.5 0.1 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase UvrD-helicase PF00580.21 gi|16082036|ref|NP_394460.1| - 4.1e-42 144.8 1.1 4.1e-42 144.8 1.1 2.3 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|16082036|ref|NP_394460.1| - 5.8e-26 91.6 0.0 3.3e-25 89.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain UvrD_C PF13361.6 gi|16082036|ref|NP_394460.1| - 6.7e-18 65.2 3.1 2.3e-13 50.3 0.0 3.1 2 1 1 3 3 3 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.7 gi|16082036|ref|NP_394460.1| - 2.7e-10 40.6 0.2 8.6e-09 35.7 0.2 2.6 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Viral_helicase1 PF01443.18 gi|16082036|ref|NP_394460.1| - 3.9e-08 33.3 0.3 0.037 13.8 0.0 3.9 3 1 0 3 3 3 3 Viral (Superfamily 1) RNA helicase UvrD_C_2 PF13538.6 gi|16082036|ref|NP_394460.1| - 6.9e-08 32.2 0.1 3.7e-06 26.7 0.1 2.6 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_11 PF13086.6 gi|16082036|ref|NP_394460.1| - 1.3e-05 25.1 0.0 2.7e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|16082036|ref|NP_394460.1| - 4.4e-05 23.3 0.0 0.006 16.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|16082036|ref|NP_394460.1| - 0.004 17.2 1.5 1.9 8.5 0.0 3.1 2 0 0 2 2 2 2 AAA domain AAA_12 PF13087.6 gi|16082036|ref|NP_394460.1| - 0.0093 15.6 3.4 0.035 13.7 0.0 3.3 4 0 0 4 4 4 1 AAA domain AAA_24 PF13479.6 gi|16082036|ref|NP_394460.1| - 0.018 14.7 0.1 4.9 6.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain Helicase_RecD PF05127.14 gi|16082036|ref|NP_394460.1| - 0.078 12.8 0.4 0.29 11.0 0.0 2.1 2 0 0 2 2 2 0 Helicase FAD_binding_2 PF00890.24 gi|16082037|ref|NP_394461.1| - 5.7e-93 312.3 0.1 7.1e-93 311.9 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|16082037|ref|NP_394461.1| - 1.7e-41 141.2 0.0 2.6e-41 140.6 0.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|16082037|ref|NP_394461.1| - 0.00012 21.4 0.7 0.012 14.9 0.2 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|16082037|ref|NP_394461.1| - 0.00049 19.6 2.4 0.042 13.2 1.7 2.7 3 0 0 3 3 3 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|16082037|ref|NP_394461.1| - 0.014 14.7 2.4 0.29 10.4 0.5 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 gi|16082037|ref|NP_394461.1| - 0.016 14.3 0.4 0.039 13.0 0.4 1.7 1 0 0 1 1 1 0 Glucose inhibited division protein A HI0933_like PF03486.14 gi|16082037|ref|NP_394461.1| - 0.03 13.1 0.7 0.06 12.0 0.7 1.5 1 0 0 1 1 1 0 HI0933-like protein Lycopene_cycl PF05834.12 gi|16082037|ref|NP_394461.1| - 0.048 12.7 0.2 0.09 11.8 0.2 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Thi4 PF01946.17 gi|16082037|ref|NP_394461.1| - 0.067 12.4 0.3 0.45 9.7 0.1 2.2 2 0 0 2 2 2 0 Thi4 family Fer2_3 PF13085.6 gi|16082038|ref|NP_394462.1| - 3.5e-34 117.1 0.1 3.5e-34 117.1 0.1 1.7 2 0 0 2 2 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|16082038|ref|NP_394462.1| - 2.9e-10 40.4 1.4 2.9e-10 40.4 1.4 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082038|ref|NP_394462.1| - 2.3e-09 37.2 3.1 2.3e-09 37.2 3.1 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16082038|ref|NP_394462.1| - 3e-08 34.1 13.9 7.2e-07 29.7 4.6 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16082038|ref|NP_394462.1| - 3.7e-08 33.8 1.5 3.7e-08 33.8 1.5 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082038|ref|NP_394462.1| - 2.2e-07 30.9 13.0 2.2e-06 27.7 4.1 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16082038|ref|NP_394462.1| - 0.00016 21.4 2.6 0.00016 21.4 2.6 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|16082038|ref|NP_394462.1| - 0.00016 21.8 3.8 0.27 11.4 0.0 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer2 PF00111.27 gi|16082038|ref|NP_394462.1| - 0.00016 21.5 0.9 0.00059 19.7 0.0 2.2 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_2 PF12797.7 gi|16082038|ref|NP_394462.1| - 0.0049 16.9 1.4 0.0049 16.9 1.4 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|16082038|ref|NP_394462.1| - 0.0065 16.6 8.4 0.0081 16.3 0.6 3.1 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|16082038|ref|NP_394462.1| - 0.01 16.8 7.3 0.01 16.8 7.3 2.6 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|16082038|ref|NP_394462.1| - 0.012 16.0 0.7 0.012 16.0 0.7 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|16082038|ref|NP_394462.1| - 0.013 15.5 4.0 0.013 15.5 4.0 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|16082038|ref|NP_394462.1| - 0.021 15.7 5.7 0.21 12.4 1.4 2.7 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16082038|ref|NP_394462.1| - 0.028 15.3 3.5 0.028 15.3 3.5 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Ribosomal_L27_C PF18471.1 gi|16082038|ref|NP_394462.1| - 0.056 12.8 0.0 0.078 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L27 protein C-terminal domain Fer4_20 PF14691.6 gi|16082038|ref|NP_394462.1| - 0.14 11.9 3.9 4.8 7.0 0.6 2.6 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Sdh_cyt PF01127.22 gi|16082039|ref|NP_394463.1| - 5.8e-13 48.9 6.2 7.8e-13 48.5 6.2 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Sdh_cyt PF01127.22 gi|16082040|ref|NP_394464.1| - 8.2e-12 45.2 8.3 1e-11 44.9 8.3 1.2 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_D PF02313.17 gi|16082040|ref|NP_394464.1| - 0.0049 17.0 5.2 0.059 13.5 5.6 2.0 1 1 1 2 2 2 1 Fumarate reductase subunit D DUF5408 PF17402.2 gi|16082040|ref|NP_394464.1| - 0.12 12.3 1.0 0.24 11.3 1.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Phage_holin_3_6 PF07332.11 gi|16082040|ref|NP_394464.1| - 0.5 10.4 6.9 2.1 8.4 1.4 2.1 1 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2663 PF10864.8 gi|16082040|ref|NP_394464.1| - 0.54 10.7 2.6 0.56 10.6 0.4 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF2663) Yip1 PF04893.17 gi|16082040|ref|NP_394464.1| - 0.96 9.1 12.3 0.086 12.6 4.3 2.1 1 1 1 2 2 2 0 Yip1 domain CoA_binding_2 PF13380.6 gi|16082041|ref|NP_394465.1| - 5.1e-39 133.4 0.1 5.7e-39 133.2 0.1 1.0 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|16082041|ref|NP_394465.1| - 9.7e-05 23.0 0.0 0.00013 22.5 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain TFIIS_C PF01096.18 gi|16082042|ref|NP_394466.1| - 1.1e-18 66.8 15.0 1.5e-18 66.3 3.0 3.3 2 1 1 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|16082042|ref|NP_394466.1| - 3.1e-07 30.1 2.3 3.1e-07 30.1 2.3 2.7 3 0 0 3 3 2 1 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 gi|16082042|ref|NP_394466.1| - 3.2e-07 29.8 13.3 5e-05 22.7 2.3 2.9 2 1 0 2 2 2 2 TFIIB zinc-binding DZR PF12773.7 gi|16082042|ref|NP_394466.1| - 7.3e-07 29.1 10.1 2.9e-05 24.0 0.7 2.7 2 1 0 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|16082042|ref|NP_394466.1| - 9.6e-07 28.3 13.9 0.055 13.2 0.3 4.2 4 0 0 4 4 4 2 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|16082042|ref|NP_394466.1| - 4.2e-06 26.6 13.8 0.00021 21.2 1.7 3.1 2 1 1 3 3 3 2 Transposase zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|16082042|ref|NP_394466.1| - 6.2e-06 26.1 11.8 0.018 15.0 2.8 4.0 3 1 0 3 3 3 1 PhnA Zinc-Ribbon OrfB_Zn_ribbon PF07282.11 gi|16082042|ref|NP_394466.1| - 4.1e-05 23.4 9.4 0.006 16.5 0.4 2.5 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf-NADH-PPase PF09297.11 gi|16082042|ref|NP_394466.1| - 0.00015 21.4 0.5 0.00015 21.4 0.5 3.3 3 0 0 3 3 3 1 NADH pyrophosphatase zinc ribbon domain zf-RRN7 PF11781.8 gi|16082042|ref|NP_394466.1| - 0.00039 20.0 0.2 0.00039 20.0 0.2 3.2 3 0 0 3 3 3 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-Mss51 PF13824.6 gi|16082042|ref|NP_394466.1| - 0.00048 20.2 9.5 0.14 12.3 2.0 2.4 2 1 0 2 2 2 2 Zinc-finger of mitochondrial splicing suppressor 51 zf_UBZ PF18439.1 gi|16082042|ref|NP_394466.1| - 0.00077 19.0 12.3 1.6 8.4 0.1 4.2 4 0 0 4 4 4 1 Ubiquitin-Binding Zinc Finger zinc-ribbons_6 PF07191.12 gi|16082042|ref|NP_394466.1| - 0.001 19.0 8.0 2.2 8.3 8.3 2.9 1 1 0 1 1 1 1 zinc-ribbons HypA PF01155.19 gi|16082042|ref|NP_394466.1| - 0.0011 19.0 7.4 0.06 13.4 1.0 2.4 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 gi|16082042|ref|NP_394466.1| - 0.0026 18.0 11.1 0.037 14.3 0.3 4.0 4 0 0 4 4 4 1 zinc-ribbon zf-C4pol PF14260.6 gi|16082042|ref|NP_394466.1| - 0.0032 17.9 3.2 1.3 9.5 3.2 2.2 1 1 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta TackOD1 PF18551.1 gi|16082042|ref|NP_394466.1| - 0.0036 17.0 6.2 0.14 11.8 6.2 2.1 1 1 0 1 1 1 1 Thaumarchaeal output domain 1 Zn-ribbon_8 PF09723.10 gi|16082042|ref|NP_394466.1| - 0.0047 17.0 15.8 2.1 8.5 4.6 4.2 2 1 0 3 3 3 1 Zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|16082042|ref|NP_394466.1| - 0.0047 16.9 4.7 3 7.9 0.0 3.4 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain IBR PF01485.21 gi|16082042|ref|NP_394466.1| - 0.0056 16.9 9.8 0.13 12.6 1.4 2.7 1 1 0 2 2 2 1 IBR domain, a half RING-finger domain Nudix_N_2 PF14803.6 gi|16082042|ref|NP_394466.1| - 0.01 15.7 12.6 2.6 8.1 0.1 4.2 4 0 0 4 4 4 0 Nudix N-terminal zf-SNAP50_C PF12251.8 gi|16082042|ref|NP_394466.1| - 0.017 14.8 1.6 0.14 11.8 0.3 2.0 2 0 0 2 2 2 0 snRNA-activating protein of 50kDa MW C terminal zf-C2HC5 PF06221.13 gi|16082042|ref|NP_394466.1| - 0.02 14.9 0.8 0.02 14.9 0.8 2.4 3 0 0 3 3 3 0 Putative zinc finger motif, C2HC5-type A2L_zn_ribbon PF08792.10 gi|16082042|ref|NP_394466.1| - 0.021 14.5 12.4 3.2 7.6 0.1 4.2 4 0 0 4 4 4 0 A2L zinc ribbon domain zf-ribbon_3 PF13248.6 gi|16082042|ref|NP_394466.1| - 0.025 14.0 18.0 0.12 11.8 6.8 4.0 3 1 0 3 3 3 0 zinc-ribbon domain Cytochrome_C7 PF14522.6 gi|16082042|ref|NP_394466.1| - 0.025 14.6 3.4 0.067 13.2 3.4 1.7 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Ribosomal_L32p PF01783.23 gi|16082042|ref|NP_394466.1| - 0.026 14.8 5.4 0.094 13.0 0.5 3.0 3 0 0 3 3 3 0 Ribosomal L32p protein family DnaJ_CXXCXGXG PF00684.19 gi|16082042|ref|NP_394466.1| - 0.03 14.7 4.3 0.49 10.8 0.2 2.4 2 0 0 2 2 2 0 DnaJ central domain UPF0547 PF10571.9 gi|16082042|ref|NP_394466.1| - 0.037 14.1 20.0 1 9.5 0.6 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 NMD3 PF04981.13 gi|16082042|ref|NP_394466.1| - 0.044 13.2 6.7 0.44 10.0 0.6 2.5 1 1 2 3 3 3 0 NMD3 family FYVE PF01363.21 gi|16082042|ref|NP_394466.1| - 0.061 13.5 3.7 0.52 10.5 3.7 2.1 1 1 0 1 1 1 0 FYVE zinc finger PHF5 PF03660.14 gi|16082042|ref|NP_394466.1| - 0.081 13.1 4.1 0.28 11.4 1.6 2.1 1 1 1 2 2 2 0 PHF5-like protein hemP PF10636.9 gi|16082042|ref|NP_394466.1| - 0.12 12.2 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Hemin uptake protein hemP zf-IS66 PF13005.7 gi|16082042|ref|NP_394466.1| - 0.12 12.8 12.7 1.5 9.3 0.2 4.2 3 1 2 5 5 5 0 zinc-finger binding domain of transposase IS66 zf-C4_Topoisom PF01396.19 gi|16082042|ref|NP_394466.1| - 0.13 12.1 15.5 0.29 11.0 0.2 4.0 2 2 1 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ISL3 PF14690.6 gi|16082042|ref|NP_394466.1| - 0.13 12.9 12.9 1.2 9.9 0.1 4.0 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cytochrome_C554 PF13435.6 gi|16082042|ref|NP_394466.1| - 0.14 13.1 3.0 0.2 12.6 3.0 1.3 1 0 0 1 1 1 0 Cytochrome c554 and c-prime Auto_anti-p27 PF06677.12 gi|16082042|ref|NP_394466.1| - 0.16 12.2 10.2 0.37 11.0 3.7 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF4428 PF14471.6 gi|16082042|ref|NP_394466.1| - 0.19 11.6 5.7 0.17 11.9 0.9 2.5 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) CpXC PF14353.6 gi|16082042|ref|NP_394466.1| - 0.25 11.4 12.7 0.38 10.8 1.6 3.8 1 1 1 3 3 3 0 CpXC protein Ribosomal_L37e PF01907.19 gi|16082042|ref|NP_394466.1| - 0.26 11.5 8.5 0.71 10.1 0.4 3.1 3 0 0 3 3 3 0 Ribosomal protein L37e Zn_ribbon_SprT PF17283.2 gi|16082042|ref|NP_394466.1| - 0.37 10.7 0.2 0.37 10.7 0.2 3.8 3 1 0 4 4 4 0 SprT-like zinc ribbon domain zf-CHY PF05495.12 gi|16082042|ref|NP_394466.1| - 0.45 11.0 9.5 3.8 8.1 2.9 2.6 1 1 0 2 2 2 0 CHY zinc finger zinc_ribbon_10 PF10058.9 gi|16082042|ref|NP_394466.1| - 0.49 10.2 13.9 7.3 6.4 3.0 3.4 2 2 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein GATA PF00320.27 gi|16082042|ref|NP_394466.1| - 0.5 10.0 6.5 5.4 6.7 0.1 3.4 3 1 0 3 3 2 0 GATA zinc finger zf-RING_4 PF14570.6 gi|16082042|ref|NP_394466.1| - 0.51 10.2 12.5 2.1 8.2 0.1 3.6 3 1 0 3 3 3 0 RING/Ubox like zinc-binding domain DUF3268 PF11672.8 gi|16082042|ref|NP_394466.1| - 0.52 10.7 6.1 3.1 8.1 0.0 2.6 2 1 1 3 3 3 0 zinc-finger-containing domain GFA PF04828.14 gi|16082042|ref|NP_394466.1| - 0.73 10.2 11.3 17 5.9 0.1 3.7 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme zf-ZPR1 PF03367.13 gi|16082042|ref|NP_394466.1| - 0.76 9.6 7.7 0.5 10.2 0.2 2.6 2 1 1 3 3 3 0 ZPR1 zinc-finger domain zf-H2C2_2 PF13465.6 gi|16082042|ref|NP_394466.1| - 0.85 10.2 16.0 1.4 9.5 0.3 3.9 3 1 1 4 4 4 0 Zinc-finger double domain zf-ACC PF17848.1 gi|16082042|ref|NP_394466.1| - 0.93 9.6 16.1 5.5 7.2 1.1 4.2 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain Terminase_GpA PF05876.12 gi|16082042|ref|NP_394466.1| - 0.96 7.9 7.3 1.5 7.3 1.8 2.3 1 1 1 2 2 2 0 Phage terminase large subunit (GpA) YhfH PF14149.6 gi|16082042|ref|NP_394466.1| - 1.3 9.1 10.4 5.6 7.0 0.1 3.6 4 0 0 4 4 3 0 YhfH-like protein Rubredoxin_2 PF18073.1 gi|16082042|ref|NP_394466.1| - 1.3 8.8 21.1 2 8.2 0.3 4.1 4 0 0 4 4 4 0 Rubredoxin metal binding domain RPA_interact_C PF14768.6 gi|16082042|ref|NP_394466.1| - 1.4 9.5 6.0 4.1 8.1 0.2 2.7 2 1 0 2 2 2 0 Replication protein A interacting C-terminal zf_C2H2_10 PF18414.1 gi|16082042|ref|NP_394466.1| - 1.5 8.4 12.0 8.1 6.1 0.2 3.8 4 0 0 4 4 4 0 C2H2 type zinc-finger Rpr2 PF04032.16 gi|16082042|ref|NP_394466.1| - 1.6 9.1 9.9 3.7e+02 1.5 9.9 3.2 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Lar_restr_allev PF14354.6 gi|16082042|ref|NP_394466.1| - 1.6 9.2 11.7 2.4 8.6 1.3 3.1 2 1 0 2 2 2 0 Restriction alleviation protein Lar DUF35_N PF12172.8 gi|16082042|ref|NP_394466.1| - 1.7 8.6 12.0 17 5.4 0.1 4.0 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_4 PF13717.6 gi|16082042|ref|NP_394466.1| - 1.7 8.6 13.9 58 3.7 0.1 4.1 3 1 0 3 3 3 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|16082042|ref|NP_394466.1| - 1.8 8.3 12.0 7.1 6.4 0.4 4.0 3 1 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit Prok-RING_1 PF14446.6 gi|16082042|ref|NP_394466.1| - 1.9 8.5 9.0 2.7 8.0 1.9 3.3 3 1 0 3 3 3 0 Prokaryotic RING finger family 1 zf-FPG_IleRS PF06827.14 gi|16082042|ref|NP_394466.1| - 2.4 8.1 11.6 7.4 6.5 0.1 3.7 4 0 0 4 4 3 0 Zinc finger found in FPG and IleRS zinc_ribbon_15 PF17032.5 gi|16082042|ref|NP_394466.1| - 2.5 8.9 13.5 0.94 10.3 1.7 3.1 1 1 1 3 3 3 0 zinc-ribbon family zf-Dof PF02701.15 gi|16082042|ref|NP_394466.1| - 2.8 8.2 11.6 0.3 11.3 1.9 2.9 2 1 1 3 3 3 0 Dof domain, zinc finger zf-HIT PF04438.16 gi|16082042|ref|NP_394466.1| - 3.2 7.7 18.2 12 5.9 5.3 3.9 3 1 0 3 3 3 0 HIT zinc finger Rubredoxin PF00301.20 gi|16082042|ref|NP_394466.1| - 3.6 7.7 15.7 6.8 6.8 0.4 4.2 3 1 1 4 4 4 0 Rubredoxin zf_CopZ PF18423.1 gi|16082042|ref|NP_394466.1| - 4.1 7.4 15.3 14 5.7 3.6 4.0 2 2 1 3 3 3 0 Zinc binding domain Mu-like_Com PF10122.9 gi|16082042|ref|NP_394466.1| - 4.7 6.7 6.8 25 4.4 0.3 3.3 2 1 1 3 3 3 0 Mu-like prophage protein Com C1_2 PF03107.16 gi|16082042|ref|NP_394466.1| - 7.1 7.0 12.6 5.5 7.4 1.0 2.9 2 1 0 2 2 2 0 C1 domain zf-TFIIB PF13453.6 gi|16082042|ref|NP_394466.1| - 8.1 5.9 15.6 16 4.9 3.4 3.5 2 2 1 3 3 3 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|16082043|ref|NP_394467.1| - 2.9e-08 33.2 5.5 5.3e-08 32.3 5.5 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|16082043|ref|NP_394467.1| - 2.5e-06 26.7 5.1 3.9e-06 26.1 5.1 1.3 1 0 0 1 1 1 1 zinc-ribbon domain UPF0547 PF10571.9 gi|16082043|ref|NP_394467.1| - 4.5e-06 26.6 4.3 7.2e-06 26.0 4.3 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zinc_ribbon_15 PF17032.5 gi|16082043|ref|NP_394467.1| - 3.2e-05 24.6 1.6 4.7e-05 24.0 1.5 1.4 1 1 0 1 1 1 1 zinc-ribbon family DZR PF12773.7 gi|16082043|ref|NP_394467.1| - 3.7e-05 23.7 0.7 5.9e-05 23.0 0.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon Vps36_ESCRT-II PF11605.8 gi|16082043|ref|NP_394467.1| - 0.0092 16.1 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 Ax_dynein_light PF10211.9 gi|16082043|ref|NP_394467.1| - 0.01 15.8 1.0 0.015 15.2 1.0 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain Prok-RING_1 PF14446.6 gi|16082043|ref|NP_394467.1| - 0.061 13.2 2.2 0.11 12.5 2.2 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Ribosomal_L32p PF01783.23 gi|16082043|ref|NP_394467.1| - 0.12 12.6 1.3 0.28 11.5 0.1 2.1 2 0 0 2 2 2 0 Ribosomal L32p protein family DUF2116 PF09889.9 gi|16082043|ref|NP_394467.1| - 0.13 12.3 1.0 0.28 11.2 1.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) YhfH PF14149.6 gi|16082043|ref|NP_394467.1| - 0.2 11.7 0.4 0.2 11.7 0.4 2.2 2 0 0 2 2 2 0 YhfH-like protein HypA PF01155.19 gi|16082043|ref|NP_394467.1| - 0.21 11.6 0.5 0.42 10.7 0.5 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Alpha-amylase_N PF02903.14 gi|16082043|ref|NP_394467.1| - 0.23 11.6 2.1 0.59 10.3 0.6 2.0 2 0 0 2 2 2 0 Alpha amylase, N-terminal ig-like domain zf-RING_7 PF02591.15 gi|16082043|ref|NP_394467.1| - 0.65 10.2 3.0 12 6.1 0.3 2.4 2 0 0 2 2 2 0 C4-type zinc ribbon domain Sgf11 PF08209.11 gi|16082043|ref|NP_394467.1| - 1.9 8.1 4.0 2.6 7.7 1.3 2.1 1 1 1 2 2 2 0 Sgf11 (transcriptional regulation protein) Cript PF10235.9 gi|16082043|ref|NP_394467.1| - 2.1 9.0 6.3 36 5.0 6.3 2.3 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT EamA PF00892.20 gi|16082044|ref|NP_394468.1| - 2.1e-37 128.4 31.9 3.2e-22 79.2 11.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family DMT_YdcZ PF04657.13 gi|16082044|ref|NP_394468.1| - 0.0084 16.4 8.3 0.0084 16.4 8.3 2.3 1 1 1 2 2 2 1 Putative inner membrane exporter, YdcZ TPT PF03151.16 gi|16082044|ref|NP_394468.1| - 0.013 14.9 18.1 0.021 14.2 5.0 2.2 1 1 1 2 2 2 0 Triose-phosphate Transporter family Vpu PF00558.19 gi|16082044|ref|NP_394468.1| - 0.088 12.6 0.6 0.21 11.4 0.0 1.9 2 0 0 2 2 2 0 Vpu protein CRT-like PF08627.10 gi|16082044|ref|NP_394468.1| - 0.21 10.5 16.8 0.036 13.0 4.5 2.2 1 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like RseC_MucC PF04246.12 gi|16082044|ref|NP_394468.1| - 6.9 6.6 17.3 0.14 12.1 0.6 3.5 2 1 2 4 4 4 0 Positive regulator of sigma(E), RseC/MucC DrsE PF02635.15 gi|16082045|ref|NP_394469.1| - 1.4e-05 25.4 0.0 1.6e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family SpoU_methylase PF00588.19 gi|16082580|ref|NP_394470.1| - 1.1e-29 103.4 0.0 1.4e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family FKBP_C PF00254.28 gi|16082046|ref|NP_394471.1| - 2.1e-06 28.0 0.3 1.1e-05 25.6 0.3 2.2 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|16082046|ref|NP_394471.1| - 0.025 14.7 0.1 0.13 12.3 0.1 2.2 2 0 0 2 2 2 0 FKBP26_C-terminal RsgI_N PF12791.7 gi|16082046|ref|NP_394471.1| - 0.044 13.7 5.6 9 6.3 0.4 3.7 3 0 0 3 3 3 0 Anti-sigma factor N-terminus TPP_enzyme_C PF02775.21 gi|16082047|ref|NP_394472.1| - 3e-18 66.0 0.2 7.2e-18 64.8 0.2 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|16082047|ref|NP_394472.1| - 1.6e-13 50.9 0.0 3e-13 50.1 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|16082047|ref|NP_394472.1| - 3.7e-11 42.4 12.2 1e-08 34.6 4.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|16082047|ref|NP_394472.1| - 2e-08 34.2 21.2 8e-06 25.9 11.3 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16082047|ref|NP_394472.1| - 3.4e-08 34.0 8.5 2.7e-05 24.6 1.3 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|16082047|ref|NP_394472.1| - 1.1e-07 31.6 19.1 2.9e-06 27.1 4.2 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|16082047|ref|NP_394472.1| - 3.7e-06 27.0 11.3 1.6e-05 24.9 10.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16082047|ref|NP_394472.1| - 4.5e-06 26.4 19.6 0.00028 20.8 2.9 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16082047|ref|NP_394472.1| - 1.6e-05 25.7 7.2 0.00026 21.9 1.0 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|16082047|ref|NP_394472.1| - 2.5e-05 24.4 12.0 0.0027 18.1 3.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|16082047|ref|NP_394472.1| - 4.6e-05 23.5 10.6 0.00015 21.8 9.9 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|16082047|ref|NP_394472.1| - 0.00014 21.6 1.3 0.01 15.5 0.1 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_17 PF13534.6 gi|16082047|ref|NP_394472.1| - 0.00046 20.7 6.8 0.013 16.0 0.5 2.5 1 1 2 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16082047|ref|NP_394472.1| - 0.00079 20.2 6.0 0.00079 20.2 6.0 2.6 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|16082047|ref|NP_394472.1| - 0.0064 17.0 14.9 0.051 14.1 3.7 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I PFOR_II PF17147.4 gi|16082047|ref|NP_394472.1| - 0.012 15.9 0.0 0.037 14.3 0.0 1.8 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_8 PF13183.6 gi|16082047|ref|NP_394472.1| - 0.019 15.4 11.0 0.06 13.8 2.2 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Transketolase_C PF02780.20 gi|16082047|ref|NP_394472.1| - 0.023 14.6 0.0 0.063 13.2 0.0 1.7 1 0 0 1 1 1 0 Transketolase, C-terminal domain Fer4_15 PF13459.6 gi|16082047|ref|NP_394472.1| - 0.045 14.5 11.3 0.41 11.4 1.2 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|16082047|ref|NP_394472.1| - 0.048 14.5 4.8 0.48 11.3 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain E1_dh PF00676.20 gi|16082047|ref|NP_394472.1| - 0.049 12.6 0.3 0.1 11.6 0.3 1.5 1 0 0 1 1 1 0 Dehydrogenase E1 component Fer4_18 PF13746.6 gi|16082047|ref|NP_394472.1| - 3.4 7.9 8.9 0.28 11.4 2.0 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR PF01558.18 gi|16082048|ref|NP_394473.1| - 3.2e-32 112.0 0.9 4e-32 111.7 0.9 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase GTP_cyclohydro2 PF00925.20 gi|16082581|ref|NP_394474.1| - 3.1e-58 195.9 0.0 3.7e-58 195.7 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase II LAGLIDADG_1 PF00961.19 gi|16082581|ref|NP_394474.1| - 0.046 14.7 0.1 0.082 13.9 0.1 1.5 1 0 0 1 1 1 0 LAGLIDADG endonuclease Methyltransf_15 PF09445.10 gi|16082049|ref|NP_394475.1| - 0.014 15.0 0.1 0.026 14.1 0.1 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase GidB PF02527.15 gi|16082049|ref|NP_394475.1| - 0.069 12.5 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G HLH PF00010.26 gi|16082049|ref|NP_394475.1| - 0.089 12.8 0.2 0.2 11.6 0.2 1.6 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain ResIII PF04851.15 gi|16082050|ref|NP_394476.1| - 2.9e-20 72.9 0.0 9.1e-20 71.4 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|16082050|ref|NP_394476.1| - 2.6e-18 66.2 0.1 4.7e-18 65.3 0.1 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 gi|16082050|ref|NP_394476.1| - 1.1e-14 54.7 0.0 4.8e-13 49.4 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain XPB_DRD PF18458.1 gi|16082050|ref|NP_394476.1| - 2.5e-10 40.1 0.2 1.1e-09 38.1 0.0 2.2 2 0 0 2 2 2 1 Xeroderma pigmentosum group B helicase damage recognition domain DEAD PF00270.29 gi|16082050|ref|NP_394476.1| - 3.2e-05 23.8 0.0 0.0001 22.1 0.0 1.9 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C_2 PF13307.6 gi|16082050|ref|NP_394476.1| - 0.0023 18.1 0.5 0.5 10.5 0.0 3.4 2 2 1 3 3 3 1 Helicase C-terminal domain DUF790 PF05626.11 gi|16082051|ref|NP_394477.1| - 1.7e-85 287.1 0.0 3.7e-83 279.4 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF790) Aminotran_5 PF00266.19 gi|16082052|ref|NP_394478.1| - 3.8e-20 72.2 0.0 4.4e-20 72.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V ThiS PF02597.20 gi|16082053|ref|NP_394479.1| - 1.8e-19 70.2 0.0 2e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 ThiS family TFIIB PF00382.19 gi|16082054|ref|NP_394480.1| - 6.6e-15 54.9 0.6 2.6e-08 33.8 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat Cyclin_C PF02984.19 gi|16082054|ref|NP_394480.1| - 1.9e-07 31.2 0.3 3.8e-07 30.2 0.1 1.6 2 0 0 2 2 2 1 Cyclin, C-terminal domain Cyclin_N PF00134.23 gi|16082054|ref|NP_394480.1| - 0.00013 21.7 0.9 0.029 14.1 0.2 2.3 1 1 1 2 2 2 2 Cyclin, N-terminal domain TFIIB_C_1 PF18542.1 gi|16082054|ref|NP_394480.1| - 0.00022 21.2 0.5 0.54 10.3 0.0 2.5 2 0 0 2 2 2 2 Transcription factor IIB C-terminal module 1 HTH_38 PF13936.6 gi|16082054|ref|NP_394480.1| - 0.0054 16.5 0.6 1.1 9.0 0.0 3.3 3 0 0 3 3 3 1 Helix-turn-helix domain ORC6 PF05460.13 gi|16082054|ref|NP_394480.1| - 0.017 14.4 0.3 0.55 9.4 0.0 2.0 2 0 0 2 2 2 0 Origin recognition complex subunit 6 (ORC6) Cyclin_C_2 PF16899.5 gi|16082054|ref|NP_394480.1| - 0.037 14.4 0.3 0.35 11.3 0.1 2.2 1 1 1 2 2 2 0 Cyclin C-terminal domain Rrf2 PF02082.20 gi|16082054|ref|NP_394480.1| - 0.096 13.0 0.7 2.5 8.5 0.0 3.2 3 2 2 5 5 5 0 Transcriptional regulator DUF1967 PF09269.11 gi|16082054|ref|NP_394480.1| - 0.14 12.1 0.0 3.1 7.8 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1967) RmlD_sub_bind PF04321.17 gi|16082055|ref|NP_394481.1| - 2.4e-06 26.8 0.0 2.9e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain PBP_like PF12727.7 gi|16082056|ref|NP_394482.1| - 3.5e-42 143.7 0.0 5e-42 143.2 0.0 1.2 1 0 0 1 1 1 1 PBP superfamily domain MoeA_N PF03453.17 gi|16082056|ref|NP_394482.1| - 2.2e-39 134.8 2.4 3.7e-39 134.0 2.4 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|16082056|ref|NP_394482.1| - 1.6e-18 66.8 0.0 2.9e-18 65.9 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|16082056|ref|NP_394482.1| - 4.9e-10 39.5 0.0 1.2e-09 38.2 0.0 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) MoeA_N PF03453.17 gi|16082057|ref|NP_394483.1| - 2.9e-33 114.9 0.0 4.5e-33 114.2 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|16082057|ref|NP_394483.1| - 1.8e-25 89.2 0.2 2.8e-25 88.7 0.2 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|16082057|ref|NP_394483.1| - 1.5e-19 70.0 0.0 3e-19 69.0 0.0 1.6 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) MFS_1 PF07690.16 gi|16082058|ref|NP_394484.1| - 3.8e-35 121.5 62.5 3.8e-35 121.5 62.5 3.5 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16082058|ref|NP_394484.1| - 1.5e-05 24.1 38.9 1.9e-05 23.8 12.8 2.6 3 1 0 3 3 3 2 Sugar (and other) transporter Hfq PF17209.3 gi|16082059|ref|NP_394485.1| - 0.076 12.7 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Hfq protein PspB PF06667.12 gi|16082060|ref|NP_394486.1| - 0.62 10.2 0.1 0.62 10.2 0.1 2.2 3 0 0 3 3 3 0 Phage shock protein B ABC_tran PF00005.27 gi|16082061|ref|NP_394487.1| - 1.7e-22 80.4 0.0 3e-22 79.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16082061|ref|NP_394487.1| - 3.1e-09 37.1 3.2 0.00031 20.7 0.4 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16082061|ref|NP_394487.1| - 5.8e-09 35.7 0.8 0.00024 20.6 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|16082061|ref|NP_394487.1| - 1.5e-06 28.8 0.3 4.3e-06 27.4 0.2 1.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|16082061|ref|NP_394487.1| - 0.00038 20.1 0.2 0.00078 19.1 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|16082061|ref|NP_394487.1| - 0.0017 18.2 0.0 0.0058 16.5 0.1 1.8 2 0 0 2 2 2 1 RsgA GTPase SgrT PF15894.5 gi|16082061|ref|NP_394487.1| - 0.0068 16.3 0.0 3.6 7.6 0.0 2.8 3 0 0 3 3 3 1 Inhibitor of glucose uptake transporter SgrT AAA_15 PF13175.6 gi|16082061|ref|NP_394487.1| - 0.0074 16.0 0.2 0.015 15.0 0.2 1.4 1 0 0 1 1 1 1 AAA ATPase domain Collectrin PF16959.5 gi|16082061|ref|NP_394487.1| - 0.0094 15.7 0.2 0.017 14.9 0.1 1.4 1 1 0 1 1 1 1 Renal amino acid transporter Zeta_toxin PF06414.12 gi|16082061|ref|NP_394487.1| - 0.089 12.1 0.0 0.23 10.7 0.0 1.7 1 1 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 gi|16082061|ref|NP_394487.1| - 0.13 11.9 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|16082061|ref|NP_394487.1| - 0.19 11.9 0.0 5.7 7.1 0.0 3.0 2 1 1 3 3 3 0 AAA domain AAA_13 PF13166.6 gi|16082061|ref|NP_394487.1| - 0.25 9.9 1.9 0.41 9.2 0.1 1.8 2 0 0 2 2 2 0 AAA domain PUA_3 PF17785.1 gi|16082062|ref|NP_394488.1| - 0.096 12.5 0.1 0.83 9.5 0.0 2.1 2 0 0 2 2 2 0 PUA-like domain Pectate_lyase_3 PF12708.7 gi|16082062|ref|NP_394488.1| - 0.1 12.4 1.8 0.13 12.1 0.4 1.7 1 1 1 2 2 2 0 Pectate lyase superfamily protein Presenilin PF01080.17 gi|16082062|ref|NP_394488.1| - 2 7.1 9.8 0.019 13.7 2.0 1.5 2 0 0 2 2 2 0 Presenilin RNA_pol_A_bac PF01000.26 gi|16082064|ref|NP_394490.1| - 7.8e-21 74.5 0.0 3.6e-20 72.4 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|16082064|ref|NP_394490.1| - 2.2e-17 62.3 0.0 2.7e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_S11 PF00411.19 gi|16082065|ref|NP_394491.1| - 7.8e-42 142.1 2.3 1e-41 141.8 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 DUF3048 PF11258.8 gi|16082065|ref|NP_394491.1| - 0.065 13.3 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3048) N-terminal domain S4 PF01479.25 gi|16082066|ref|NP_394492.1| - 3.2e-15 55.5 1.6 7.2e-15 54.4 0.3 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 gi|16082066|ref|NP_394492.1| - 1.6e-05 25.7 2.8 3.3e-05 24.7 0.3 2.4 2 1 1 3 3 3 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S13 PF00416.22 gi|16082067|ref|NP_394493.1| - 2e-36 125.2 0.6 2.5e-36 124.9 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Sdh5 PF03937.16 gi|16082067|ref|NP_394493.1| - 0.015 15.2 0.1 0.034 14.1 0.1 1.5 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase Cucumo_2B PF03263.13 gi|16082067|ref|NP_394493.1| - 0.078 13.4 0.6 0.26 11.7 0.2 1.9 2 0 0 2 2 2 0 Cucumovirus protein 2B MFS_1 PF07690.16 gi|16082068|ref|NP_394494.1| - 3e-26 92.2 55.9 1.4e-18 66.9 25.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|16082068|ref|NP_394494.1| - 1.8e-09 36.7 34.8 1.8e-09 36.7 34.8 1.7 1 1 1 2 2 2 1 MFS/sugar transport protein XPG_I PF00867.18 gi|16082069|ref|NP_394495.1| - 4.7e-25 87.8 0.0 9.2e-25 86.8 0.0 1.5 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|16082069|ref|NP_394495.1| - 1.1e-17 64.4 0.0 2.4e-17 63.3 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|16082069|ref|NP_394495.1| - 0.00014 22.4 1.5 0.00018 22.0 0.2 1.9 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|16082069|ref|NP_394495.1| - 0.068 13.8 0.1 0.17 12.5 0.1 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain DUF2576 PF10845.8 gi|16082069|ref|NP_394495.1| - 0.1 12.3 0.4 0.26 10.9 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) Rad51 PF08423.11 gi|16082070|ref|NP_394496.1| - 3.5e-28 98.5 0.7 6.2e-28 97.8 0.7 1.3 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|16082070|ref|NP_394496.1| - 6.8e-08 32.1 5.3 7.9e-05 22.1 1.2 2.1 1 1 0 2 2 2 2 KaiC RecA PF00154.21 gi|16082070|ref|NP_394496.1| - 9.1e-08 31.9 1.0 1.7e-07 31.0 1.0 1.4 1 1 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|16082070|ref|NP_394496.1| - 2e-06 27.5 0.0 4.1e-06 26.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|16082070|ref|NP_394496.1| - 0.00052 19.7 0.0 0.00084 19.0 0.0 1.2 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) DnaB_C PF03796.15 gi|16082070|ref|NP_394496.1| - 0.0018 17.7 1.9 0.036 13.4 0.5 2.2 1 1 1 2 2 2 1 DnaB-like helicase C terminal domain CbiA PF01656.23 gi|16082070|ref|NP_394496.1| - 0.034 14.2 0.0 0.051 13.6 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PIF1 PF05970.14 gi|16082070|ref|NP_394496.1| - 0.045 12.9 0.0 0.065 12.4 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase AAA_31 PF13614.6 gi|16082070|ref|NP_394496.1| - 0.052 13.5 0.3 0.15 12.0 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|16082070|ref|NP_394496.1| - 0.08 13.4 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|16082070|ref|NP_394496.1| - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|16082070|ref|NP_394496.1| - 0.14 11.9 0.1 0.32 10.7 0.0 1.6 1 1 0 1 1 1 0 IstB-like ATP binding protein Peptidase_M24 PF00557.24 gi|16082071|ref|NP_394497.1| - 5.1e-72 241.9 0.2 6.8e-72 241.5 0.2 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|16082071|ref|NP_394497.1| - 1.3e-10 42.0 0.1 2.7e-10 41.0 0.1 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Herpes_IE68 PF02479.16 gi|16082071|ref|NP_394497.1| - 0.05 13.2 0.0 0.098 12.3 0.0 1.4 1 0 0 1 1 1 0 Herpesvirus immediate early protein DNA_primase_lrg PF04104.14 gi|16082072|ref|NP_394498.1| - 1.1e-39 136.4 0.4 3.1e-39 135.0 0.4 1.6 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Cytochrom_C552 PF02335.15 gi|16082072|ref|NP_394498.1| - 0.005 15.8 0.0 0.0066 15.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome c552 Imm70 PF15601.6 gi|16082072|ref|NP_394498.1| - 0.071 12.7 0.0 0.26 10.8 0.0 1.8 1 1 1 2 2 2 0 Immunity protein 70 Smr PF01713.21 gi|16082072|ref|NP_394498.1| - 0.17 12.3 0.0 0.46 10.9 0.0 1.6 1 1 0 1 1 1 0 Smr domain SRP19 PF01922.17 gi|16082582|ref|NP_394499.1| - 8e-05 23.5 0.1 0.0001 23.2 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein DUF4224 PF13986.6 gi|16082582|ref|NP_394499.1| - 0.0079 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4224) HTH_37 PF13744.6 gi|16082582|ref|NP_394499.1| - 0.048 13.6 0.1 0.099 12.6 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_S8e PF01201.22 gi|16082073|ref|NP_394500.1| - 1e-35 122.9 5.6 1.1e-35 122.8 5.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Nitro_FeMo-Co PF02579.17 gi|16082583|ref|NP_394501.1| - 6.7e-11 42.4 0.0 8.2e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF2884 PF11101.8 gi|16082074|ref|NP_394502.1| - 0.0015 18.1 0.5 0.0021 17.6 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2884) PsbU PF06514.11 gi|16082074|ref|NP_394502.1| - 0.03 14.3 0.1 0.052 13.5 0.1 1.4 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) PBECR5 PF18814.1 gi|16082074|ref|NP_394502.1| - 0.045 13.7 1.8 0.056 13.4 1.8 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 BRF1 PF07741.13 gi|16082074|ref|NP_394502.1| - 0.089 13.1 0.7 0.18 12.2 0.7 1.5 1 0 0 1 1 1 0 Brf1-like TBP-binding domain DUF2070 PF09843.9 gi|16082075|ref|NP_394503.1| - 6.5e-137 457.2 10.2 7.4e-137 457.0 10.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) PurS PF02700.14 gi|16082584|ref|NP_394504.1| - 1.1e-19 70.4 0.1 1.3e-19 70.2 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase E1-E2_ATPase PF00122.20 gi|16082076|ref|NP_394505.1| - 8.8e-46 155.7 4.1 8.8e-46 155.7 4.1 3.4 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|16082076|ref|NP_394505.1| - 8.3e-28 98.1 0.0 1.6e-27 97.2 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 gi|16082076|ref|NP_394505.1| - 8.9e-15 54.1 0.0 8.9e-15 54.1 0.0 2.2 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|16082076|ref|NP_394505.1| - 4.2e-07 30.0 0.6 5.7e-05 23.0 0.3 2.4 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 gi|16082076|ref|NP_394505.1| - 1.6e-06 28.0 9.9 1.6e-06 28.0 9.9 2.3 2 1 0 2 2 2 1 Cation transporting ATPase, C-terminus HAD PF12710.7 gi|16082076|ref|NP_394505.1| - 0.00063 20.2 0.0 0.0019 18.6 0.0 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|16082076|ref|NP_394505.1| - 0.0016 18.4 0.0 0.0069 16.4 0.0 2.0 1 0 0 1 1 1 1 Cation transport ATPase (P-type) tRNA_bind PF01588.20 gi|16082077|ref|NP_394506.1| - 7.1e-12 45.3 0.0 8.2e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 Putative tRNA binding domain Esterase PF00756.20 gi|16082078|ref|NP_394507.1| - 3.1e-11 43.4 0.0 5.8e-11 42.5 0.0 1.4 1 1 0 1 1 1 1 Putative esterase Abhydrolase_1 PF00561.20 gi|16082078|ref|NP_394507.1| - 0.0006 19.5 0.0 0.00082 19.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|16082078|ref|NP_394507.1| - 0.0011 18.3 0.0 0.0017 17.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 gi|16082078|ref|NP_394507.1| - 0.0011 18.5 0.0 0.0037 16.8 0.0 1.8 2 0 0 2 2 2 1 Prolyl oligopeptidase family E3_UbLigase_RBR PF18091.1 gi|16082654|ref|NP_394508.1| - 0.023 14.8 0.3 0.025 14.7 0.3 1.1 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain THAP PF05485.12 gi|16082654|ref|NP_394508.1| - 0.039 14.9 1.7 0.072 14.0 1.7 1.5 1 1 0 1 1 1 0 THAP domain Glycos_transf_2 PF00535.26 gi|16082079|ref|NP_394509.1| - 6.7e-22 78.1 0.5 1.3e-21 77.2 0.1 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|16082079|ref|NP_394509.1| - 1.2e-13 51.5 0.0 3.2e-12 46.8 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|16082079|ref|NP_394509.1| - 7.1e-11 42.1 0.5 9.3e-06 25.3 0.1 2.1 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|16082079|ref|NP_394509.1| - 4.3e-07 30.0 0.0 2.8e-06 27.4 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|16082079|ref|NP_394509.1| - 1.6e-05 24.4 0.0 0.00019 21.0 0.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_transf_7C PF02709.14 gi|16082079|ref|NP_394509.1| - 0.0061 16.2 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_tranf_2_4 PF13704.6 gi|16082079|ref|NP_394509.1| - 0.024 15.2 0.0 0.044 14.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 MGAT2 PF05060.14 gi|16082079|ref|NP_394509.1| - 0.03 13.4 0.0 0.064 12.3 0.0 1.5 2 0 0 2 2 2 0 N-acetylglucosaminyltransferase II (MGAT2) ABC_tran PF00005.27 gi|16082080|ref|NP_394510.1| - 1.3e-26 93.7 0.0 1.9e-26 93.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16082080|ref|NP_394510.1| - 1.1e-05 25.4 0.2 0.00059 19.7 0.1 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16082080|ref|NP_394510.1| - 0.00043 19.8 0.5 0.0053 16.2 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|16082080|ref|NP_394510.1| - 0.0023 17.6 0.1 0.0046 16.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|16082080|ref|NP_394510.1| - 0.0028 18.2 0.1 0.0046 17.5 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|16082080|ref|NP_394510.1| - 0.0043 16.8 0.0 0.0043 16.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.6 gi|16082080|ref|NP_394510.1| - 0.0088 14.8 0.0 0.012 14.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|16082080|ref|NP_394510.1| - 0.032 13.4 0.0 0.061 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) SbcCD_C PF13558.6 gi|16082080|ref|NP_394510.1| - 0.033 14.4 0.1 0.22 11.8 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 gi|16082080|ref|NP_394510.1| - 0.035 13.7 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|16082080|ref|NP_394510.1| - 0.13 12.0 0.0 0.34 10.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|16082080|ref|NP_394510.1| - 0.14 12.1 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase IIGP PF05049.13 gi|16082080|ref|NP_394510.1| - 0.17 10.9 0.1 1.8 7.5 0.1 2.0 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) BPD_transp_1 PF00528.22 gi|16082081|ref|NP_394511.1| - 1.4e-06 28.2 16.5 1.4e-06 28.2 16.5 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TCR_zetazeta PF11628.8 gi|16082081|ref|NP_394511.1| - 1.6 8.5 7.4 11 5.8 1.3 2.6 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain SBP_bac_11 PF13531.6 gi|16082082|ref|NP_394512.1| - 5e-13 49.3 0.0 1e-12 48.3 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Isochorismatase PF00857.20 gi|16082083|ref|NP_394513.1| - 1.7e-39 135.8 0.0 2e-39 135.6 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DNA_topoisoIV PF00521.20 gi|16082084|ref|NP_394514.1| - 1.2e-154 515.3 0.1 1.7e-154 514.9 0.1 1.2 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|16082084|ref|NP_394514.1| - 1.3e-58 194.2 19.1 2.6e-11 42.8 0.2 7.0 7 0 0 7 7 7 6 DNA gyrase C-terminal domain, beta-propeller zf-C4H2 PF10146.9 gi|16082084|ref|NP_394514.1| - 0.0045 17.3 3.5 0.0072 16.7 3.5 1.3 1 0 0 1 1 1 1 Zinc finger-containing protein Retrotran_gag_2 PF14223.6 gi|16082084|ref|NP_394514.1| - 0.0061 16.2 0.4 0.013 15.2 0.4 1.5 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type TPD52 PF04201.15 gi|16082084|ref|NP_394514.1| - 0.02 14.5 1.9 0.043 13.4 1.9 1.5 1 0 0 1 1 1 0 Tumour protein D52 family EF-hand_4 PF12763.7 gi|16082084|ref|NP_394514.1| - 0.025 14.5 0.6 0.27 11.2 0.0 2.7 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand AAA_13 PF13166.6 gi|16082084|ref|NP_394514.1| - 0.07 11.8 5.3 0.11 11.1 5.3 1.2 1 0 0 1 1 1 0 AAA domain DUF2746 PF10874.8 gi|16082084|ref|NP_394514.1| - 0.18 12.2 1.0 0.56 10.6 1.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2746) GrpE PF01025.19 gi|16082084|ref|NP_394514.1| - 0.44 10.2 8.2 4.4 7.0 2.6 2.6 1 1 1 2 2 2 0 GrpE DUF724 PF05266.14 gi|16082084|ref|NP_394514.1| - 4.8 7.0 7.2 6.6 6.5 6.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DNA_gyraseB PF00204.25 gi|16082085|ref|NP_394515.1| - 1.7e-51 174.1 1.0 2.1e-51 173.8 0.1 1.6 2 0 0 2 2 2 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|16082085|ref|NP_394515.1| - 5.5e-32 109.7 0.3 1.2e-31 108.7 0.3 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|16082085|ref|NP_394515.1| - 2.3e-19 70.0 0.1 6e-19 68.6 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|16082085|ref|NP_394515.1| - 2.4e-19 69.5 0.0 1.2e-18 67.2 0.0 2.2 2 0 0 2 2 2 1 Toprim domain HATPase_c_3 PF13589.6 gi|16082085|ref|NP_394515.1| - 0.0042 16.9 0.0 0.0085 15.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ribosomal_L16 PF00252.18 gi|16082585|ref|NP_394517.1| - 1.9e-32 112.1 0.1 2.2e-32 111.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Arginase PF00491.21 gi|16082087|ref|NP_394518.1| - 2.5e-67 227.3 0.0 3.1e-67 227.0 0.0 1.0 1 0 0 1 1 1 1 Arginase family eIF-5a PF01287.20 gi|16082088|ref|NP_394519.1| - 9.5e-06 25.6 0.1 1.9e-05 24.7 0.1 1.5 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|16082088|ref|NP_394519.1| - 2.2e-05 24.4 0.0 5.8e-05 23.0 0.0 1.7 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|16082088|ref|NP_394519.1| - 0.016 15.2 0.0 0.028 14.4 0.0 1.4 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain Amidohydro_1 PF01979.20 gi|16082586|ref|NP_394520.1| - 2.5e-64 217.8 0.1 3e-64 217.5 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|16082586|ref|NP_394520.1| - 2.9e-21 76.5 0.1 1.5e-12 47.8 0.0 2.8 2 1 1 3 3 3 2 Amidohydrolase family TatD_DNase PF01026.21 gi|16082586|ref|NP_394520.1| - 0.017 14.5 0.0 0.03 13.7 0.0 1.3 1 0 0 1 1 1 0 TatD related DNase PadR PF03551.14 gi|16082587|ref|NP_394521.1| - 3.4e-07 30.1 0.1 6.4e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Rrf2 PF02082.20 gi|16082587|ref|NP_394521.1| - 0.00039 20.7 0.1 0.0037 17.6 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulator HTH_45 PF14947.6 gi|16082587|ref|NP_394521.1| - 0.0008 19.3 0.2 0.0018 18.2 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|16082587|ref|NP_394521.1| - 0.0046 17.1 0.1 0.043 14.0 0.1 2.3 1 1 0 1 1 1 1 Winged helix DNA-binding domain DUF4364 PF14277.6 gi|16082587|ref|NP_394521.1| - 0.0048 16.7 0.0 0.0074 16.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Phage_pRha PF09669.10 gi|16082587|ref|NP_394521.1| - 0.025 15.1 0.1 0.043 14.4 0.1 1.4 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) Penicillinase_R PF03965.16 gi|16082587|ref|NP_394521.1| - 0.04 14.3 0.1 0.28 11.5 0.1 1.9 1 1 1 2 2 2 0 Penicillinase repressor Peptidase_M41 PF01434.18 gi|16082587|ref|NP_394521.1| - 0.098 12.5 0.1 0.15 11.9 0.0 1.4 1 1 0 1 1 1 0 Peptidase family M41 MFS_1 PF07690.16 gi|16082089|ref|NP_394522.1| - 2e-42 145.4 40.9 2e-42 145.4 40.9 2.2 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16082089|ref|NP_394522.1| - 8.3e-09 34.8 14.0 8.3e-09 34.8 14.0 4.0 1 1 1 3 3 3 1 Sugar (and other) transporter TRI12 PF06609.13 gi|16082089|ref|NP_394522.1| - 1.2e-05 24.0 10.5 1.2e-05 24.0 10.5 2.3 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) NPCBM_assoc PF10633.9 gi|16082090|ref|NP_394523.1| - 4.6e-07 30.0 0.5 0.16 12.2 0.0 4.7 5 0 0 5 5 5 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|16082090|ref|NP_394523.1| - 0.0014 18.9 1.6 0.27 11.5 0.0 4.1 3 1 1 4 4 4 1 CARDB CTP-dep_RFKase PF01982.16 gi|16082091|ref|NP_394524.1| - 7.1e-43 145.6 0.1 1.1e-42 144.9 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_Crp_2 PF13545.6 gi|16082091|ref|NP_394524.1| - 4.8e-07 29.7 0.2 1e-06 28.6 0.2 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|16082091|ref|NP_394524.1| - 3.7e-06 26.8 0.1 7.3e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|16082091|ref|NP_394524.1| - 6.1e-06 26.0 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|16082091|ref|NP_394524.1| - 4.6e-05 22.9 0.1 0.00011 21.7 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|16082091|ref|NP_394524.1| - 0.00036 20.7 0.2 0.0014 18.8 0.1 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|16082091|ref|NP_394524.1| - 0.00071 20.0 0.1 0.0014 19.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|16082091|ref|NP_394524.1| - 0.0013 19.0 0.3 0.0035 17.7 0.1 1.8 2 0 0 2 2 2 1 Transcriptional regulator HTH_34 PF13601.6 gi|16082091|ref|NP_394524.1| - 0.0014 18.8 0.1 0.0053 16.9 0.1 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF1670 PF07900.11 gi|16082091|ref|NP_394524.1| - 0.0084 15.5 0.2 0.018 14.4 0.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) HTH_11 PF08279.12 gi|16082091|ref|NP_394524.1| - 0.0097 15.8 0.7 0.0097 15.8 0.7 2.4 2 1 0 2 2 2 1 HTH domain HTH_36 PF13730.6 gi|16082091|ref|NP_394524.1| - 0.015 15.2 0.1 0.037 14.0 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain Ribosomal_S25 PF03297.15 gi|16082091|ref|NP_394524.1| - 0.016 15.4 0.2 0.03 14.5 0.2 1.4 1 0 0 1 1 1 0 S25 ribosomal protein HTH_3 PF01381.22 gi|16082091|ref|NP_394524.1| - 0.035 14.1 0.4 0.097 12.7 0.2 1.9 2 0 0 2 2 1 0 Helix-turn-helix HTH_IclR PF09339.10 gi|16082091|ref|NP_394524.1| - 0.048 13.5 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|16082091|ref|NP_394524.1| - 0.052 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease TrmB PF01978.19 gi|16082091|ref|NP_394524.1| - 0.074 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF3853 PF12964.7 gi|16082091|ref|NP_394524.1| - 0.09 13.0 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) YjcQ PF09639.10 gi|16082091|ref|NP_394524.1| - 0.12 12.6 0.6 0.45 10.8 0.2 2.1 1 1 1 2 2 2 0 YjcQ protein FtsK_gamma PF09397.10 gi|16082091|ref|NP_394524.1| - 0.12 12.2 0.8 0.31 10.9 0.8 1.7 1 1 0 1 1 1 0 Ftsk gamma domain AIRS_C PF02769.22 gi|16082093|ref|NP_394526.1| - 6.7e-52 175.7 0.1 4.8e-37 127.5 0.1 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|16082093|ref|NP_394526.1| - 2.3e-39 134.0 0.3 1.6e-20 73.5 0.1 2.5 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|16082093|ref|NP_394526.1| - 7.9e-20 71.1 0.0 2e-19 69.8 0.0 1.8 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain DUF1884 PF08967.10 gi|16082093|ref|NP_394526.1| - 0.15 12.3 0.4 0.66 10.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1884) Glyco_transf_4 PF13439.6 gi|16082094|ref|NP_394527.1| - 3.6e-24 85.7 0.0 7e-24 84.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|16082094|ref|NP_394527.1| - 1.7e-21 76.5 0.0 2.9e-21 75.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|16082094|ref|NP_394527.1| - 9.2e-19 68.2 0.0 4.6e-17 62.7 0.0 2.7 3 0 0 3 3 3 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|16082094|ref|NP_394527.1| - 4.6e-15 56.4 0.0 9.8e-15 55.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|16082094|ref|NP_394527.1| - 2.5e-09 37.3 0.0 4.8e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|16082094|ref|NP_394527.1| - 4.7e-05 23.7 0.0 0.00012 22.4 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 PhosphMutase PF10143.9 gi|16082094|ref|NP_394527.1| - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase NAD_kinase PF01513.21 gi|16082095|ref|NP_394528.1| - 1.2e-66 224.9 0.0 1.3e-66 224.8 0.0 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|16082095|ref|NP_394528.1| - 0.0035 17.0 0.1 0.013 15.1 0.0 2.0 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain DUF1659 PF07872.11 gi|16082095|ref|NP_394528.1| - 0.17 11.5 0.0 0.41 10.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1659) MFS_1 PF07690.16 gi|16082096|ref|NP_394529.1| - 6.5e-12 45.0 37.7 7.6e-12 44.8 34.7 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily ABC2_membrane_4 PF12730.7 gi|16082096|ref|NP_394529.1| - 1.1 9.1 15.8 0.83 9.6 1.0 3.2 3 0 0 3 3 3 0 ABC-2 family transporter protein DUF4083 PF13314.6 gi|16082096|ref|NP_394529.1| - 1.3 9.1 4.4 0.81 9.7 0.3 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) MarC PF01914.17 gi|16082097|ref|NP_394530.1| - 3.7e-42 144.0 18.2 4.2e-42 143.8 18.2 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein ODV-E18 PF10717.9 gi|16082097|ref|NP_394530.1| - 1 9.3 4.4 14 5.6 1.3 2.7 1 1 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 ABC2_membrane PF01061.24 gi|16082098|ref|NP_394531.1| - 2.9e-07 30.1 25.4 2.9e-07 30.1 25.4 2.0 2 0 0 2 2 2 2 ABC-2 type transporter ABC_tran PF00005.27 gi|16082099|ref|NP_394532.1| - 2.4e-23 83.2 0.0 5.6e-23 82.0 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|16082099|ref|NP_394532.1| - 4e-12 46.6 0.0 2.7e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|16082099|ref|NP_394532.1| - 2.9e-05 23.6 0.0 0.00018 21.0 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|16082099|ref|NP_394532.1| - 6e-05 22.9 0.0 0.011 15.4 0.1 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|16082099|ref|NP_394532.1| - 0.00013 22.5 0.3 0.00023 21.7 0.3 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|16082099|ref|NP_394532.1| - 0.0011 18.7 0.3 0.0021 17.8 0.3 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|16082099|ref|NP_394532.1| - 0.0096 16.2 0.0 0.02 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|16082099|ref|NP_394532.1| - 0.01 15.6 0.1 0.094 12.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain DUF3584 PF12128.8 gi|16082099|ref|NP_394532.1| - 0.015 12.9 0.2 0.02 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_13 PF13166.6 gi|16082099|ref|NP_394532.1| - 0.028 13.1 0.0 0.047 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain MukB PF04310.12 gi|16082099|ref|NP_394532.1| - 0.055 13.3 0.0 0.088 12.6 0.0 1.2 1 0 0 1 1 1 0 MukB N-terminal ABC_ATPase PF09818.9 gi|16082099|ref|NP_394532.1| - 0.068 12.0 0.4 0.13 11.1 0.4 1.4 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA PF00004.29 gi|16082099|ref|NP_394532.1| - 0.072 13.5 0.1 0.29 11.6 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|16082099|ref|NP_394532.1| - 0.12 12.6 0.0 0.25 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|16082099|ref|NP_394532.1| - 0.14 12.0 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 gi|16082099|ref|NP_394532.1| - 0.14 12.0 0.1 0.34 10.8 0.1 1.6 1 0 0 1 1 1 0 NACHT domain DUF87 PF01935.17 gi|16082099|ref|NP_394532.1| - 0.15 12.1 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 gi|16082099|ref|NP_394532.1| - 0.18 11.9 0.1 0.41 10.8 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|16082099|ref|NP_394532.1| - 0.19 12.1 0.0 0.39 11.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Epimerase PF01370.21 gi|16082100|ref|NP_394533.1| - 1.1e-19 70.9 0.0 1.9e-19 70.1 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|16082100|ref|NP_394533.1| - 5.3e-18 65.5 0.0 3.7e-14 52.9 0.0 2.4 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|16082100|ref|NP_394533.1| - 0.0014 17.8 0.0 0.013 14.6 0.0 2.4 2 0 0 2 2 2 1 RmlD substrate binding domain UDPG_MGDP_dh_N PF03721.14 gi|16082100|ref|NP_394533.1| - 0.0062 16.1 0.0 0.013 15.1 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Polysacc_synt_2 PF02719.15 gi|16082100|ref|NP_394533.1| - 0.0099 15.0 0.0 0.07 12.3 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NTP_transferase PF00483.23 gi|16082101|ref|NP_394534.1| - 3.5e-18 66.1 0.0 4.1e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|16082101|ref|NP_394534.1| - 8.7e-06 26.2 0.0 1.1e-05 25.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|16082101|ref|NP_394534.1| - 0.0017 18.2 0.0 0.0023 17.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 PGK PF00162.19 gi|16082102|ref|NP_394535.1| - 1.1e-104 350.4 0.1 1.3e-104 350.2 0.1 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Polbeta PF18765.1 gi|16082102|ref|NP_394535.1| - 0.012 15.7 0.1 0.029 14.4 0.1 1.7 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Prefoldin PF02996.17 gi|16082588|ref|NP_394536.1| - 1.8e-23 82.7 0.7 2.1e-23 82.5 0.7 1.0 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|16082588|ref|NP_394536.1| - 3e-05 23.9 0.4 0.021 14.8 0.1 2.1 2 0 0 2 2 2 2 Prefoldin subunit FlaC_arch PF05377.11 gi|16082588|ref|NP_394536.1| - 8.3e-05 22.9 4.7 0.068 13.6 0.7 2.2 2 0 0 2 2 2 2 Flagella accessory protein C (FlaC) Osmo_CC PF08946.10 gi|16082588|ref|NP_394536.1| - 0.00021 21.5 3.1 0.026 14.8 0.3 2.3 2 0 0 2 2 2 2 Osmosensory transporter coiled coil SlyX PF04102.12 gi|16082588|ref|NP_394536.1| - 0.00066 20.3 2.9 0.0075 16.9 0.1 2.2 2 0 0 2 2 2 1 SlyX NPV_P10 PF05531.12 gi|16082588|ref|NP_394536.1| - 0.016 15.6 3.6 3 8.4 0.2 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Vps5 PF09325.10 gi|16082588|ref|NP_394536.1| - 0.017 14.6 2.5 1.9 8.0 0.3 2.0 2 0 0 2 2 2 0 Vps5 C terminal like DivIC PF04977.15 gi|16082588|ref|NP_394536.1| - 0.021 14.6 1.2 0.32 10.8 0.2 2.1 2 0 0 2 2 2 0 Septum formation initiator DUF948 PF06103.11 gi|16082588|ref|NP_394536.1| - 0.024 14.9 1.3 0.92 9.8 0.1 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DegS PF05384.11 gi|16082588|ref|NP_394536.1| - 0.026 14.0 2.1 0.28 10.6 0.2 2.1 2 0 0 2 2 2 0 Sensor protein DegS CLZ PF16526.5 gi|16082588|ref|NP_394536.1| - 0.027 14.8 0.2 0.27 11.6 0.0 2.1 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Baculo_PEP_C PF04513.12 gi|16082588|ref|NP_394536.1| - 0.056 13.5 2.9 3.6 7.6 0.3 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus STAT_alpha PF01017.20 gi|16082588|ref|NP_394536.1| - 0.058 13.3 0.4 0.092 12.6 0.4 1.4 1 1 0 1 1 1 0 STAT protein, all-alpha domain Rsd_AlgQ PF04353.13 gi|16082588|ref|NP_394536.1| - 0.069 13.1 0.5 0.14 12.1 0.2 1.6 2 0 0 2 2 2 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Tektin PF03148.14 gi|16082588|ref|NP_394536.1| - 0.07 11.9 2.7 0.39 9.4 0.4 2.0 2 0 0 2 2 2 0 Tektin family SKA2 PF16740.5 gi|16082588|ref|NP_394536.1| - 0.076 12.8 1.7 0.14 11.9 0.4 1.9 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DHR10 PF18595.1 gi|16082588|ref|NP_394536.1| - 0.081 13.0 2.9 5 7.2 0.6 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain Sec2p PF06428.11 gi|16082588|ref|NP_394536.1| - 0.089 12.8 2.5 2.9 7.9 0.1 2.1 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p TPR_MLP1_2 PF07926.12 gi|16082588|ref|NP_394536.1| - 0.095 12.8 3.0 0.24 11.4 1.0 2.0 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Nnf1 PF03980.14 gi|16082588|ref|NP_394536.1| - 0.1 13.0 1.2 14 6.1 0.3 2.2 2 0 0 2 2 2 0 Nnf1 Fib_alpha PF08702.10 gi|16082588|ref|NP_394536.1| - 0.2 11.8 3.4 4.5 7.5 0.2 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family FlxA PF14282.6 gi|16082588|ref|NP_394536.1| - 0.2 11.6 2.4 11 6.1 0.2 2.2 2 0 0 2 2 2 0 FlxA-like protein Vps51 PF08700.11 gi|16082588|ref|NP_394536.1| - 0.25 11.4 3.7 2 8.5 0.5 2.2 2 0 0 2 2 2 0 Vps51/Vps67 Csm1_N PF18504.1 gi|16082588|ref|NP_394536.1| - 0.42 11.0 4.9 0.63 10.4 2.1 2.1 2 0 0 2 2 2 0 Csm1 N-terminal domain SRP54 PF00448.22 gi|16082103|ref|NP_394537.1| - 7.3e-75 250.9 0.0 9.5e-75 250.5 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|16082103|ref|NP_394537.1| - 3.5e-06 26.9 0.2 7.4e-06 25.8 0.2 1.5 1 1 0 1 1 1 1 AAA domain SRP54_N PF02881.19 gi|16082103|ref|NP_394537.1| - 7.4e-06 26.1 1.3 7.4e-06 26.1 1.3 1.6 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain cobW PF02492.19 gi|16082103|ref|NP_394537.1| - 1.5e-05 24.6 0.1 2.6e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|16082103|ref|NP_394537.1| - 0.00037 20.5 0.5 0.0011 19.0 0.5 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase CbiA PF01656.23 gi|16082103|ref|NP_394537.1| - 0.00058 19.9 0.1 0.003 17.6 0.0 2.2 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_17 PF13207.6 gi|16082103|ref|NP_394537.1| - 0.00063 20.2 0.1 0.0011 19.4 0.1 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|16082103|ref|NP_394537.1| - 0.0007 18.9 0.0 0.0015 17.8 0.0 1.7 1 1 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 gi|16082103|ref|NP_394537.1| - 0.00091 19.7 0.0 0.0017 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.6 gi|16082103|ref|NP_394537.1| - 0.0012 19.2 0.0 0.0023 18.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|16082103|ref|NP_394537.1| - 0.0043 16.1 0.3 0.011 14.8 0.1 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 gi|16082103|ref|NP_394537.1| - 0.0045 16.7 0.0 0.0086 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|16082103|ref|NP_394537.1| - 0.0048 16.6 0.1 0.024 14.3 0.1 2.1 2 0 0 2 2 2 1 Thymidylate kinase GTP_EFTU PF00009.27 gi|16082103|ref|NP_394537.1| - 0.0052 16.4 0.3 0.01 15.4 0.3 1.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA PF00004.29 gi|16082103|ref|NP_394537.1| - 0.0066 16.9 0.2 0.015 15.7 0.2 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) APS_kinase PF01583.20 gi|16082103|ref|NP_394537.1| - 0.01 15.7 0.0 0.022 14.7 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase KdpD PF02702.17 gi|16082103|ref|NP_394537.1| - 0.012 15.1 0.0 0.022 14.2 0.0 1.4 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain DUF2075 PF09848.9 gi|16082103|ref|NP_394537.1| - 0.014 14.7 0.0 0.02 14.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.15 gi|16082103|ref|NP_394537.1| - 0.019 14.9 0.4 1.5 8.7 0.1 2.3 2 0 0 2 2 2 0 NTPase Scm3 PF10384.9 gi|16082103|ref|NP_394537.1| - 0.023 14.4 0.7 0.33 10.7 0.2 2.3 2 0 0 2 2 2 0 Centromere protein Scm3 AAA_7 PF12775.7 gi|16082103|ref|NP_394537.1| - 0.03 13.8 0.0 0.079 12.5 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_33 PF13671.6 gi|16082103|ref|NP_394537.1| - 0.055 13.6 0.0 0.089 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|16082103|ref|NP_394537.1| - 0.058 12.7 0.3 0.13 11.6 0.3 1.6 1 1 0 1 1 1 0 KaiC Helicase_RecD PF05127.14 gi|16082103|ref|NP_394537.1| - 0.067 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Helicase ResIII PF04851.15 gi|16082103|ref|NP_394537.1| - 0.068 13.2 0.2 0.19 11.7 0.2 1.8 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ATP_bind_1 PF03029.17 gi|16082103|ref|NP_394537.1| - 0.11 12.2 0.1 1.3 8.8 0.1 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_5 PF07728.14 gi|16082103|ref|NP_394537.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Peripla_BP_6 PF13458.6 gi|16082103|ref|NP_394537.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.4 1 1 0 1 1 1 0 Periplasmic binding protein AAA_31 PF13614.6 gi|16082103|ref|NP_394537.1| - 0.16 11.9 1.6 1.3 8.9 0.1 2.5 2 1 0 3 3 3 0 AAA domain NACHT PF05729.12 gi|16082103|ref|NP_394537.1| - 0.2 11.5 0.2 4.8 7.1 0.1 2.2 2 0 0 2 2 2 0 NACHT domain TrwB_AAD_bind PF10412.9 gi|16082103|ref|NP_394537.1| - 0.81 8.5 2.2 1.4 7.7 0.2 2.3 3 1 1 4 4 4 0 Type IV secretion-system coupling protein DNA-binding domain Aminotran_1_2 PF00155.21 gi|16082104|ref|NP_394538.1| - 1.3e-23 83.8 0.0 2e-23 83.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II CobS PF02654.15 gi|16082105|ref|NP_394539.1| - 5e-35 121.6 14.2 5.8e-35 121.3 14.2 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase CGI-121 PF08617.10 gi|298205267|ref|YP_003717783.1| - 0.0003 20.9 0.0 0.00034 20.8 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 AAA_32 PF13654.6 gi|16082106|ref|NP_394540.1| - 1.4e-30 106.6 0.0 1.9e-23 83.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain Lon_C PF05362.13 gi|16082106|ref|NP_394540.1| - 3.8e-30 105.0 6.7 6.2e-30 104.3 6.7 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain Mg_chelatase PF01078.21 gi|16082106|ref|NP_394540.1| - 6.1e-15 55.2 0.0 1.4e-08 34.4 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|16082106|ref|NP_394540.1| - 1.5e-13 50.8 0.0 3.5e-07 30.1 0.0 2.7 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 gi|16082106|ref|NP_394540.1| - 7.8e-11 42.1 0.0 0.00051 20.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|16082106|ref|NP_394540.1| - 1.4e-08 34.6 0.5 2.9e-08 33.6 0.5 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase MCM PF00493.23 gi|16082106|ref|NP_394540.1| - 1.1e-07 31.2 0.0 0.0076 15.4 0.0 2.7 2 0 0 2 2 2 2 MCM P-loop domain AAA_22 PF13401.6 gi|16082106|ref|NP_394540.1| - 1.4e-06 28.6 0.0 0.00014 22.1 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA PF00004.29 gi|16082106|ref|NP_394540.1| - 2.5e-06 27.9 0.0 0.11 12.9 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|16082106|ref|NP_394540.1| - 0.00013 22.4 0.0 0.057 13.8 0.0 3.1 3 0 0 3 3 3 1 AAA ATPase domain AAA_7 PF12775.7 gi|16082106|ref|NP_394540.1| - 0.00019 21.0 0.0 0.0024 17.4 0.0 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 gi|16082106|ref|NP_394540.1| - 0.00021 21.4 0.0 0.86 9.7 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.11 gi|16082106|ref|NP_394540.1| - 0.00044 20.1 0.0 0.19 11.6 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|16082106|ref|NP_394540.1| - 0.00097 19.1 0.0 0.0036 17.3 0.0 1.9 2 0 0 2 2 2 1 NACHT domain RuvB_N PF05496.12 gi|16082106|ref|NP_394540.1| - 0.0015 18.3 0.0 0.59 9.9 0.0 2.6 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|16082106|ref|NP_394540.1| - 0.0015 18.9 0.0 0.18 12.1 0.0 2.8 2 1 0 2 2 2 1 AAA domain DUF4191 PF13829.6 gi|16082106|ref|NP_394540.1| - 0.013 14.9 1.3 0.13 11.6 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) AAA_10 PF12846.7 gi|16082106|ref|NP_394540.1| - 0.014 14.3 0.7 0.17 10.8 0.0 2.4 2 0 0 2 2 2 0 AAA-like domain AAA_30 PF13604.6 gi|16082106|ref|NP_394540.1| - 0.017 14.8 0.0 0.27 10.9 0.0 2.6 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 gi|16082106|ref|NP_394540.1| - 0.078 13.4 0.0 0.38 11.2 0.0 2.1 2 0 0 2 2 2 0 RNA helicase IstB_IS21 PF01695.17 gi|16082106|ref|NP_394540.1| - 0.098 12.4 0.0 0.29 10.9 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_25 PF13481.6 gi|16082106|ref|NP_394540.1| - 0.12 11.9 0.0 0.35 10.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain Herpes_Helicase PF02689.14 gi|16082106|ref|NP_394540.1| - 0.13 10.1 0.0 0.22 9.4 0.0 1.2 1 0 0 1 1 1 0 Helicase DUF2207 PF09972.9 gi|16082106|ref|NP_394540.1| - 0.16 10.7 0.5 0.3 9.8 0.5 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5345 PF17280.2 gi|16082106|ref|NP_394540.1| - 6.7 6.8 7.0 2 8.5 2.7 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF1495 PF07381.11 gi|16082589|ref|NP_394541.1| - 2.8e-31 107.2 0.1 3.5e-31 106.9 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) NfeD PF01957.18 gi|16082107|ref|NP_394542.1| - 2.1e-18 66.5 5.0 2.9e-18 66.0 1.8 2.5 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding SDH_sah PF01972.16 gi|16082107|ref|NP_394542.1| - 0.014 14.4 0.5 0.022 13.8 0.5 1.4 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Peptidase_S49 PF01343.18 gi|16082107|ref|NP_394542.1| - 0.066 13.2 3.4 0.12 12.3 1.8 2.1 1 1 1 2 2 2 0 Peptidase family S49 PBP PF01161.20 gi|16082108|ref|NP_394543.1| - 4.6e-33 114.3 0.0 5.5e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein MFS_1 PF07690.16 gi|16082109|ref|NP_394544.1| - 2.2e-31 109.1 56.9 3.1e-21 75.7 32.9 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|16082109|ref|NP_394544.1| - 1e-05 24.2 5.3 1e-05 24.2 5.3 2.1 2 1 0 2 2 2 1 Transmembrane secretion effector Sugar_tr PF00083.24 gi|16082109|ref|NP_394544.1| - 0.016 14.1 28.8 0.063 12.1 9.9 3.1 2 1 0 3 3 3 0 Sugar (and other) transporter GrpE PF01025.19 gi|16082110|ref|NP_394545.1| - 5.6e-33 113.9 3.5 9.7e-33 113.2 3.5 1.4 1 1 0 1 1 1 1 GrpE HSP70 PF00012.20 gi|16082111|ref|NP_394546.1| - 5.9e-219 728.2 14.3 4.4e-199 662.6 12.3 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 gi|16082111|ref|NP_394546.1| - 2.6e-19 69.2 1.4 2.6e-19 69.2 1.4 2.3 2 1 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 gi|16082111|ref|NP_394546.1| - 0.00042 20.7 4.7 1.1 9.8 0.0 4.4 4 1 0 4 4 4 1 Cell division protein FtsA Sec6 PF06046.13 gi|16082111|ref|NP_394546.1| - 0.0025 16.3 3.8 0.0041 15.5 3.8 1.2 1 0 0 1 1 1 1 Exocyst complex component Sec6 StbA PF06406.11 gi|16082111|ref|NP_394546.1| - 0.0083 15.4 0.1 0.0083 15.4 0.1 1.9 2 0 0 2 2 2 1 StbA protein TRAF_BIRC3_bd PF16673.5 gi|16082111|ref|NP_394546.1| - 0.19 11.6 6.6 0.065 13.0 2.2 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Raco_middle PF17651.1 gi|16082111|ref|NP_394546.1| - 2 8.1 4.6 4.9 6.8 0.0 3.1 3 0 0 3 3 3 0 RACo middle region Allexi_40kDa PF05549.11 gi|16082111|ref|NP_394546.1| - 2.7 7.4 5.5 4.7 6.6 5.5 1.4 1 0 0 1 1 1 0 Allexivirus 40kDa protein LMBR1 PF04791.16 gi|16082111|ref|NP_394546.1| - 5.5 5.8 6.0 7.8 5.3 6.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DnaJ_C PF01556.18 gi|16082112|ref|NP_394547.1| - 2.2e-39 134.9 0.1 2.8e-39 134.5 0.1 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|16082112|ref|NP_394547.1| - 1.5e-29 101.9 4.5 3.1e-29 100.9 2.7 2.2 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|16082112|ref|NP_394547.1| - 1.6e-14 54.0 14.3 3.6e-14 52.9 14.3 1.6 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|16082112|ref|NP_394547.1| - 9.8e-05 22.2 18.7 0.032 14.2 5.0 2.5 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 gi|16082112|ref|NP_394547.1| - 0.00062 19.8 8.7 0.095 12.7 0.6 2.4 1 1 1 2 2 2 2 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RPT PF13446.6 gi|16082112|ref|NP_394547.1| - 0.0028 17.6 0.0 0.006 16.5 0.0 1.6 1 0 0 1 1 1 1 A repeated domain in UCH-protein DUF4460 PF14687.6 gi|16082112|ref|NP_394547.1| - 0.019 15.0 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) TackOD1 PF18551.1 gi|16082112|ref|NP_394547.1| - 0.052 13.2 5.5 0.79 9.4 0.3 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 Zn_Tnp_IS1 PF03811.13 gi|16082112|ref|NP_394547.1| - 0.41 10.4 2.2 24 4.8 0.1 3.3 3 0 0 3 3 3 0 InsA N-terminal domain DUF1356 PF07092.12 gi|16082112|ref|NP_394547.1| - 1.1 8.5 14.7 2.4 7.4 2.8 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1356) zinc-ribbons_6 PF07191.12 gi|16082112|ref|NP_394547.1| - 1.6 8.8 8.9 63 3.7 9.1 2.3 1 1 1 2 2 2 0 zinc-ribbons FdhE PF04216.12 gi|16082112|ref|NP_394547.1| - 2 8.2 6.5 0.53 10.1 2.9 1.7 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 gi|16082112|ref|NP_394547.1| - 3 7.8 6.8 9.2 6.2 0.7 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 gi|16082112|ref|NP_394547.1| - 3.8 7.5 6.1 1.1 9.2 0.4 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 DUF5351 PF17302.2 gi|16082112|ref|NP_394547.1| - 10 6.4 26.9 4.1 7.7 1.6 4.6 4 1 0 4 4 4 0 Family of unknown function (DUF5351) SHS2_Rpb7-N PF03876.17 gi|16082590|ref|NP_394548.1| - 6.6e-16 58.5 0.1 9.9e-16 57.9 0.1 1.3 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|16082590|ref|NP_394548.1| - 6.5e-12 45.6 0.4 1.6e-11 44.4 0.4 1.7 1 0 0 1 1 1 1 S1 RNA binding domain TRAM PF01938.20 gi|16082590|ref|NP_394548.1| - 0.015 15.3 0.2 1 9.4 0.0 2.7 3 0 0 3 3 3 0 TRAM domain RNase_II_C_S1 PF18614.1 gi|16082590|ref|NP_394548.1| - 0.023 14.7 0.0 0.069 13.1 0.0 1.8 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain CSD2 PF17876.1 gi|16082590|ref|NP_394548.1| - 0.14 12.3 0.7 5.9 7.1 0.0 2.8 3 0 0 3 3 3 0 Cold shock domain RNA_pol_Rbc25 PF08292.12 gi|16082590|ref|NP_394548.1| - 0.27 11.5 1.0 0.65 10.2 0.2 1.9 1 1 1 2 2 2 0 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|16082113|ref|NP_394549.1| - 3.7e-14 52.6 0.0 4.6e-14 52.3 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Nop10p PF04135.12 gi|16082113|ref|NP_394549.1| - 0.13 12.3 1.9 0.19 11.8 1.9 1.2 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family DUF359 PF04019.12 gi|16082114|ref|NP_394550.1| - 6.1e-31 106.7 0.1 8.2e-31 106.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) A-2_8-polyST PF07388.11 gi|16082114|ref|NP_394550.1| - 0.054 12.1 0.0 0.064 11.9 0.0 1.1 1 0 0 1 1 1 0 Alpha-2,8-polysialyltransferase (POLYST) Ribosomal_S24e PF01282.19 gi|16082115|ref|NP_394551.1| - 1.7e-19 69.5 0.6 2.3e-19 69.1 0.4 1.3 1 1 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S27 PF01599.19 gi|16082116|ref|NP_394552.1| - 6.7e-19 67.8 2.3 7.7e-19 67.6 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Ribosomal_L37e PF01907.19 gi|16082116|ref|NP_394552.1| - 0.00017 21.7 3.2 0.00022 21.3 3.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e zf-NADH-PPase PF09297.11 gi|16082116|ref|NP_394552.1| - 0.00048 19.7 1.2 0.00048 19.7 1.2 2.2 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain GFA PF04828.14 gi|16082116|ref|NP_394552.1| - 0.0034 17.7 1.4 0.39 11.1 0.0 2.0 1 1 1 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme DZR PF12773.7 gi|16082116|ref|NP_394552.1| - 0.009 16.0 1.5 0.016 15.3 1.5 1.4 1 1 0 1 1 1 1 Double zinc ribbon MqsA_antitoxin PF15731.5 gi|16082116|ref|NP_394552.1| - 0.027 14.6 0.1 0.038 14.1 0.1 1.3 1 1 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA zinc_ribbon_13 PF09855.9 gi|16082116|ref|NP_394552.1| - 0.033 14.4 3.0 0.048 13.8 0.5 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Nudix_N_2 PF14803.6 gi|16082116|ref|NP_394552.1| - 0.037 13.9 7.2 0.23 11.4 7.2 2.0 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|16082116|ref|NP_394552.1| - 0.047 13.4 3.9 0.42 10.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|16082116|ref|NP_394552.1| - 0.058 13.4 5.0 0.1 12.6 4.6 1.7 1 1 1 2 2 2 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|16082116|ref|NP_394552.1| - 0.13 12.0 1.6 6.1 6.7 0.1 2.2 1 1 1 2 2 2 0 A2L zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|16082116|ref|NP_394552.1| - 0.36 11.0 5.0 2.6 8.3 0.7 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like RNA_POL_M_15KD PF02150.16 gi|16082116|ref|NP_394552.1| - 1.9 8.4 7.4 21 5.1 7.4 2.3 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf_UBZ PF18439.1 gi|16082116|ref|NP_394552.1| - 6.5 6.4 8.7 19 5.0 1.0 2.5 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF2175 PF09943.9 gi|16082655|ref|NP_394553.1| - 2.3e-22 79.1 1.4 2.6e-22 79.0 1.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2175) DUF763 PF05559.11 gi|16082117|ref|NP_394554.1| - 3.3e-107 358.3 0.0 4e-107 358.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) FGGY_N PF00370.21 gi|16082118|ref|NP_394555.1| - 2.2e-57 194.4 0.0 3.1e-57 193.9 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|16082118|ref|NP_394555.1| - 7.8e-46 156.3 0.0 3.5e-45 154.2 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain DUF981 PF06168.11 gi|16082119|ref|NP_394556.1| - 1.5e-56 191.3 23.9 1.6e-56 191.2 23.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) eRF1_1 PF03463.15 gi|16082120|ref|NP_394557.1| - 3.1e-28 98.4 1.9 5.3e-28 97.6 1.9 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|16082120|ref|NP_394557.1| - 1.7e-20 73.6 0.4 1.2e-19 70.9 0.3 2.4 2 1 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|16082120|ref|NP_394557.1| - 0.0037 17.6 0.0 0.016 15.6 0.0 1.9 1 1 0 1 1 1 1 eRF1 domain 2 Biotin_carb_N PF00289.22 gi|16082120|ref|NP_394557.1| - 0.0067 17.0 0.2 0.028 14.9 0.1 2.0 1 1 1 2 2 2 1 Biotin carboxylase, N-terminal domain GRDB PF07355.12 gi|16082120|ref|NP_394557.1| - 0.09 12.0 0.1 0.17 11.1 0.1 1.4 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Mut7-C PF01927.16 gi|16082121|ref|NP_394558.1| - 2.2e-36 125.1 0.0 2.6e-36 124.9 0.0 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|16082121|ref|NP_394558.1| - 7.1e-05 22.5 0.0 0.00013 21.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) Zn_ribbon_SprT PF17283.2 gi|16082121|ref|NP_394558.1| - 0.0023 17.8 3.5 0.41 10.6 0.2 2.4 2 0 0 2 2 2 2 SprT-like zinc ribbon domain zf-TFIIB PF13453.6 gi|16082121|ref|NP_394558.1| - 0.068 12.5 0.8 0.13 11.6 0.8 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger Flavoprotein PF02441.19 gi|16082122|ref|NP_394559.1| - 2.6e-27 95.5 0.0 4e-27 94.9 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Gp_dh_C PF02800.20 gi|16082125|ref|NP_394562.1| - 4.1e-25 88.2 0.1 6.2e-25 87.6 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|16082125|ref|NP_394562.1| - 8.4e-09 35.6 0.1 2e-08 34.4 0.1 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|16082125|ref|NP_394562.1| - 8.6e-07 29.2 0.4 2.7e-06 27.6 0.1 2.1 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|16082125|ref|NP_394562.1| - 0.0055 17.0 0.1 0.013 15.8 0.1 1.7 1 0 0 1 1 1 1 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|16082125|ref|NP_394562.1| - 0.011 15.1 0.6 0.3 10.4 0.4 2.5 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF4331 PF14224.6 gi|16082125|ref|NP_394562.1| - 0.045 12.9 0.0 0.068 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4331) GFO_IDH_MocA PF01408.22 gi|16082125|ref|NP_394562.1| - 0.061 14.2 0.4 0.32 11.8 0.1 2.4 2 2 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Rad51 PF08423.11 gi|16082126|ref|NP_394563.1| - 5.2e-86 288.0 0.0 6.4e-86 287.8 0.0 1.0 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|16082126|ref|NP_394563.1| - 1.9e-11 44.4 1.6 4.9e-11 43.1 1.6 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|16082126|ref|NP_394563.1| - 1.7e-10 40.8 0.1 2.5e-10 40.3 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 gi|16082126|ref|NP_394563.1| - 2.7e-08 33.5 0.1 3.9e-08 32.9 0.1 1.4 1 0 0 1 1 1 1 KaiC HHH PF00633.23 gi|16082126|ref|NP_394563.1| - 4.7e-07 29.4 2.0 0.015 15.1 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif AAA_25 PF13481.6 gi|16082126|ref|NP_394563.1| - 2.3e-06 27.3 0.0 3.8e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH_2 PF12826.7 gi|16082126|ref|NP_394563.1| - 1.4e-05 25.1 0.1 4.5e-05 23.5 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif IMS_HHH PF11798.8 gi|16082126|ref|NP_394563.1| - 0.00013 22.1 0.0 0.12 12.8 0.0 2.8 2 0 0 2 2 2 1 IMS family HHH motif BAF PF02961.14 gi|16082126|ref|NP_394563.1| - 0.00018 21.9 0.3 0.0057 17.1 0.0 2.9 2 1 1 3 3 3 1 Barrier to autointegration factor HHH_8 PF14716.6 gi|16082126|ref|NP_394563.1| - 0.00044 20.6 0.7 0.67 10.4 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|16082126|ref|NP_394563.1| - 0.0015 18.7 0.0 0.003 17.8 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|16082126|ref|NP_394563.1| - 0.0017 18.1 1.0 0.23 11.3 0.0 3.4 2 1 1 3 3 3 1 Fingers domain of DNA polymerase lambda HHH_3 PF12836.7 gi|16082126|ref|NP_394563.1| - 0.0061 16.8 0.3 0.25 11.6 0.0 2.7 3 0 0 3 3 2 1 Helix-hairpin-helix motif AAA_22 PF13401.6 gi|16082126|ref|NP_394563.1| - 0.011 16.0 0.0 0.02 15.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|16082126|ref|NP_394563.1| - 0.033 13.9 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain 5_3_exonuc PF01367.20 gi|16082126|ref|NP_394563.1| - 0.069 13.8 0.6 3.5 8.3 0.2 2.5 1 1 1 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Macro PF01661.21 gi|16082127|ref|NP_394564.1| - 3.9e-38 130.1 0.0 4.9e-38 129.8 0.0 1.1 1 0 0 1 1 1 1 Macro domain NUMOD1 PF07453.13 gi|16082127|ref|NP_394564.1| - 0.089 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 NUMOD1 domain ACT PF01842.25 gi|16082128|ref|NP_394565.1| - 1.2e-08 34.5 0.2 2.4e-08 33.6 0.2 1.5 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 gi|16082128|ref|NP_394565.1| - 0.032 14.0 0.1 0.068 13.0 0.1 1.6 1 0 0 1 1 1 0 ACT domain ATP-grasp PF02222.22 gi|16082129|ref|NP_394566.1| - 1.3e-37 129.0 0.0 2.1e-37 128.4 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|16082129|ref|NP_394566.1| - 3.8e-15 55.3 0.3 3.8e-14 52.1 0.0 2.2 2 0 0 2 2 2 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain GARS_A PF01071.19 gi|16082129|ref|NP_394566.1| - 0.007 16.1 0.3 0.046 13.5 0.0 2.5 3 1 0 3 3 3 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 2-Hacid_dh_C PF02826.19 gi|16082129|ref|NP_394566.1| - 0.02 14.2 0.0 0.039 13.3 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPSase_L_D2 PF02786.17 gi|16082129|ref|NP_394566.1| - 0.038 13.5 0.3 0.96 8.9 0.3 2.3 1 1 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_5 PF13549.6 gi|16082129|ref|NP_394566.1| - 0.083 12.3 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain TauE PF01925.19 gi|16082130|ref|NP_394567.1| - 1.6e-35 122.8 41.8 1.9e-35 122.6 41.8 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Gly-zipper_YMGG PF13441.6 gi|16082130|ref|NP_394567.1| - 0.32 10.8 13.0 31 4.4 11.8 3.7 2 2 0 2 2 2 0 YMGG-like Gly-zipper FmdE PF02663.14 gi|16082131|ref|NP_394568.1| - 3.9e-24 85.2 0.0 1e-23 83.8 0.0 1.6 2 0 0 2 2 2 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zinc_ribbon_5 PF13719.6 gi|16082131|ref|NP_394568.1| - 0.037 13.8 0.2 0.067 13.0 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|16082131|ref|NP_394568.1| - 0.057 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain LIM PF00412.22 gi|16082131|ref|NP_394568.1| - 0.072 13.3 0.3 0.12 12.6 0.3 1.3 1 0 0 1 1 1 0 LIM domain zf-RRN7 PF11781.8 gi|16082131|ref|NP_394568.1| - 0.5 10.1 3.3 2.1 8.1 0.2 2.5 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 HTH_5 PF01022.20 gi|16082132|ref|NP_394569.1| - 2.6e-14 52.8 0.1 7.8e-14 51.3 0.1 1.8 1 1 1 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|16082132|ref|NP_394569.1| - 1e-07 31.9 0.0 1.4e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|16082132|ref|NP_394569.1| - 0.00064 19.6 0.0 0.0012 18.6 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|16082132|ref|NP_394569.1| - 0.0013 18.6 0.0 0.002 18.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|16082132|ref|NP_394569.1| - 0.0039 16.7 0.0 0.0066 16.0 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|16082132|ref|NP_394569.1| - 0.0056 16.8 0.0 0.0082 16.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|16082132|ref|NP_394569.1| - 0.01 15.7 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 0 MarR family TFIIE_alpha PF02002.17 gi|16082132|ref|NP_394569.1| - 0.04 13.8 0.0 0.056 13.3 0.0 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_DeoR PF08220.12 gi|16082132|ref|NP_394569.1| - 0.058 13.1 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|16082132|ref|NP_394569.1| - 0.072 13.1 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CtsR_C PF17727.1 gi|16082132|ref|NP_394569.1| - 0.093 12.9 0.0 0.29 11.3 0.0 1.8 2 0 0 2 2 2 0 CtsR C-terminal dimerization domain RP-C PF03428.13 gi|16082132|ref|NP_394569.1| - 0.19 11.4 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain Epimerase PF01370.21 gi|16082133|ref|NP_394570.1| - 3.5e-27 95.4 0.0 4.9e-27 95.0 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|16082133|ref|NP_394570.1| - 6.1e-21 75.2 0.1 1.5e-20 73.9 0.1 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|16082133|ref|NP_394570.1| - 9.4e-16 57.6 0.0 2.5e-15 56.2 0.0 1.7 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|16082133|ref|NP_394570.1| - 1.7e-12 47.1 0.0 2.2e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|16082133|ref|NP_394570.1| - 7.2e-09 35.2 0.0 6.5e-07 28.8 0.0 2.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|16082133|ref|NP_394570.1| - 9.3e-06 25.0 0.0 7.3e-05 22.1 0.0 2.2 2 1 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 gi|16082133|ref|NP_394570.1| - 2.1e-05 24.5 0.0 3.1e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|16082133|ref|NP_394570.1| - 7.6e-05 22.7 0.0 0.00091 19.2 0.0 2.1 1 1 0 1 1 1 1 KR domain TGase_elicitor PF16683.5 gi|16082133|ref|NP_394570.1| - 0.11 11.2 0.0 0.16 10.7 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase elicitor GTP_EFTU PF00009.27 gi|16082134|ref|NP_394571.1| - 3.1e-32 111.7 4.3 1e-31 110.0 0.9 2.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|16082134|ref|NP_394571.1| - 4.7e-21 74.5 2.3 7.3e-21 73.9 0.3 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|16082134|ref|NP_394571.1| - 8.8e-21 74.0 2.4 2.4e-20 72.6 2.4 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 gi|16082134|ref|NP_394571.1| - 3.7e-09 36.7 0.3 1.4e-08 34.8 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 gi|16082134|ref|NP_394571.1| - 7.2e-07 29.5 9.2 0.0013 19.1 0.6 3.2 3 0 0 3 3 3 2 Elongation factor Tu domain 2 Dynamin_N PF00350.23 gi|16082134|ref|NP_394571.1| - 0.00073 19.6 0.1 0.23 11.5 0.0 2.7 1 1 1 2 2 2 2 Dynamin family Roc PF08477.13 gi|16082134|ref|NP_394571.1| - 0.064 13.5 0.0 0.18 12.0 0.0 1.9 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 gi|16082134|ref|NP_394571.1| - 0.96 9.3 4.0 0.59 10.0 0.3 2.5 3 0 0 3 3 3 0 RsgA GTPase NDK PF00334.19 gi|16082135|ref|NP_394572.1| - 8e-56 187.8 0.0 9e-56 187.6 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase PAC1 PF16094.5 gi|16082135|ref|NP_394572.1| - 0.1 11.8 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Ribosomal_L24e PF01246.20 gi|16082136|ref|NP_394573.1| - 1.6e-23 82.7 0.7 1.8e-23 82.5 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|16082136|ref|NP_394573.1| - 9.9e-07 28.6 0.3 1.5e-06 28.0 0.3 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-FLZ PF04570.14 gi|16082136|ref|NP_394573.1| - 1.9e-06 27.3 0.4 2.6e-06 26.8 0.4 1.2 1 0 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 YHS PF04945.13 gi|16082136|ref|NP_394573.1| - 0.0001 22.3 0.1 0.00016 21.7 0.1 1.3 1 0 0 1 1 1 1 YHS domain DUF2116 PF09889.9 gi|16082136|ref|NP_394573.1| - 0.0069 16.3 0.7 3.4 7.7 0.1 2.3 2 0 0 2 2 2 2 Uncharacterized protein containing a Zn-ribbon (DUF2116) Ta0938 PF11494.8 gi|16082136|ref|NP_394573.1| - 0.0085 16.4 0.1 0.0096 16.2 0.1 1.1 1 0 0 1 1 1 1 Ta0938 DUF3268 PF11672.8 gi|16082136|ref|NP_394573.1| - 0.038 14.3 0.4 0.038 14.3 0.4 1.2 1 0 0 1 1 1 0 zinc-finger-containing domain Arc_trans_TRASH PF08394.10 gi|16082136|ref|NP_394573.1| - 0.043 14.2 1.0 0.043 14.2 1.0 1.7 2 0 0 2 2 2 0 Archaeal TRASH domain PH_14 PF17787.1 gi|16082136|ref|NP_394573.1| - 0.057 13.3 0.0 0.069 13.0 0.0 1.3 1 1 0 1 1 1 0 PH domain VATC PF18716.1 gi|16082136|ref|NP_394573.1| - 0.15 11.9 3.4 0.57 10.1 3.4 1.8 1 1 0 1 1 1 0 Vms1-associating treble clef domain DUF2256 PF10013.9 gi|16082136|ref|NP_394573.1| - 0.16 12.1 4.5 1.8 8.7 0.1 2.5 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) YacG PF03884.14 gi|16082136|ref|NP_394573.1| - 1 9.1 3.9 5.3 6.9 3.9 2.3 1 1 0 1 1 1 0 DNA gyrase inhibitor YacG Ribosomal_S28e PF01200.18 gi|16082137|ref|NP_394574.1| - 2e-30 104.6 2.5 2.2e-30 104.5 2.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|16082138|ref|NP_394575.1| - 1.1e-24 86.0 0.4 1.3e-24 85.7 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 gi|16082138|ref|NP_394575.1| - 0.011 15.8 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 RNase P subunit Pop3 LigB PF02900.18 gi|16082139|ref|NP_394576.1| - 1.5e-30 106.2 0.0 1.7e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF4382 PF14321.6 gi|16082140|ref|NP_394577.1| - 3e-21 76.1 0.1 3.5e-21 75.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4382) fn3_5 PF06280.12 gi|16082140|ref|NP_394577.1| - 0.058 14.1 0.3 0.15 12.7 0.3 1.8 1 1 0 1 1 1 0 Fn3-like domain ATP_bind_3 PF01171.20 gi|16082141|ref|NP_394578.1| - 8.9e-12 45.1 0.0 2.2e-11 43.8 0.0 1.7 1 1 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.16 gi|16082141|ref|NP_394578.1| - 1.6e-05 23.9 0.0 2.1e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase zn-ribbon_14 PF16503.5 gi|16082141|ref|NP_394578.1| - 5.8e-05 22.5 1.2 5.8e-05 22.5 1.2 2.4 3 0 0 3 3 3 1 Zinc-ribbon RecR PF02132.15 gi|16082141|ref|NP_394578.1| - 0.0017 17.9 1.0 0.0017 17.9 1.0 2.7 3 0 0 3 3 3 1 RecR protein QueC PF06508.13 gi|16082141|ref|NP_394578.1| - 0.0059 16.1 0.0 0.14 11.6 0.0 3.0 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.19 gi|16082141|ref|NP_394578.1| - 0.0076 16.3 0.0 0.039 14.0 0.0 2.2 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|16082141|ref|NP_394578.1| - 0.023 13.8 0.0 0.036 13.2 0.0 1.3 1 0 0 1 1 1 0 NAD synthase AA_permease_2 PF13520.6 gi|16082142|ref|NP_394579.1| - 5.8e-20 71.5 64.4 1.3e-19 70.3 64.4 1.5 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16082142|ref|NP_394579.1| - 1.2e-15 57.1 56.6 2e-15 56.4 56.6 1.3 1 0 0 1 1 1 1 Amino acid permease CobA_CobO_BtuR PF02572.15 gi|16082143|ref|NP_394580.1| - 8.6e-53 179.1 0.0 1.1e-51 175.5 0.0 1.9 1 1 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Aldo_ket_red PF00248.21 gi|16082143|ref|NP_394580.1| - 0.00093 18.5 0.0 0.0012 18.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family SDH_C PF18317.1 gi|16082143|ref|NP_394580.1| - 0.062 13.1 0.1 0.15 11.9 0.1 1.7 1 0 0 1 1 1 0 Shikimate 5'-dehydrogenase C-terminal domain Spherulin4 PF12138.8 gi|16082144|ref|NP_394581.1| - 8e-33 114.1 1.2 1.2e-32 113.5 1.2 1.2 1 0 0 1 1 1 1 Spherulation-specific family 4 DAO PF01266.24 gi|16082145|ref|NP_394582.1| - 1.5e-65 222.1 0.0 1.7e-65 222.0 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|16082145|ref|NP_394582.1| - 1.8e-06 27.5 0.2 0.0003 20.1 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082145|ref|NP_394582.1| - 5.3e-06 26.9 0.2 0.00071 20.1 0.2 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|16082145|ref|NP_394582.1| - 1.1e-05 25.6 0.1 2.4e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|16082145|ref|NP_394582.1| - 0.0006 18.6 0.1 0.0022 16.7 0.1 1.8 2 0 0 2 2 2 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|16082145|ref|NP_394582.1| - 0.0016 17.7 0.1 0.0025 17.1 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|16082145|ref|NP_394582.1| - 0.0026 17.1 0.0 0.055 12.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|16082145|ref|NP_394582.1| - 0.022 14.0 0.2 0.042 13.1 0.2 1.5 1 0 0 1 1 1 0 Thi4 family TrkA_N PF02254.18 gi|16082145|ref|NP_394582.1| - 0.025 14.8 0.1 0.044 14.0 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_7 PF13241.6 gi|16082145|ref|NP_394582.1| - 0.025 15.0 0.1 0.14 12.6 0.1 2.0 1 1 0 1 1 1 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|16082145|ref|NP_394582.1| - 0.029 13.4 0.2 0.041 13.0 0.1 1.3 1 1 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.19 gi|16082145|ref|NP_394582.1| - 0.062 12.5 0.0 1.3 8.2 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain Mqo PF06039.15 gi|16082145|ref|NP_394582.1| - 0.25 9.8 0.0 0.41 9.2 0.0 1.3 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) EMG1 PF03587.14 gi|16082591|ref|NP_394583.1| - 2.8e-42 144.6 0.1 3.2e-42 144.4 0.1 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase DUF1641 PF07849.11 gi|16082146|ref|NP_394584.1| - 6.1e-12 45.2 0.1 3e-11 43.0 0.1 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) TPR_2 PF07719.17 gi|16082148|ref|NP_394586.1| - 1.7e-27 93.2 20.7 0.0016 18.4 0.0 9.4 9 0 0 9 9 9 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|16082148|ref|NP_394586.1| - 5.3e-26 91.0 13.7 6.7e-10 39.4 0.1 6.4 5 2 4 9 9 8 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|16082148|ref|NP_394586.1| - 3.3e-22 78.7 14.2 3e-05 24.4 1.4 6.8 4 3 3 7 7 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16082148|ref|NP_394586.1| - 7.3e-22 76.2 11.5 0.024 15.5 0.0 9.8 4 4 6 10 10 10 5 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|16082148|ref|NP_394586.1| - 1.2e-16 60.7 7.9 0.00031 20.9 0.0 6.1 2 2 5 7 7 7 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 gi|16082148|ref|NP_394586.1| - 6.1e-16 57.5 26.5 0.00051 19.8 3.1 8.7 9 0 0 9 9 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|16082148|ref|NP_394586.1| - 3.3e-15 54.9 40.1 0.022 15.0 2.8 11.3 12 0 0 12 12 11 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|16082148|ref|NP_394586.1| - 5.6e-15 54.7 20.9 0.0025 17.4 0.2 8.2 7 1 1 8 8 8 4 TPR repeat TPR_17 PF13431.6 gi|16082148|ref|NP_394586.1| - 4e-14 51.9 17.8 0.0013 19.0 0.3 7.9 8 1 0 8 8 7 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|16082148|ref|NP_394586.1| - 4.3e-14 52.4 6.4 0.00017 21.6 0.1 6.0 4 3 2 6 6 6 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|16082148|ref|NP_394586.1| - 3.5e-11 43.2 16.2 0.0016 18.7 2.3 7.8 3 2 7 10 10 10 5 Tetratricopeptide repeat TPR_20 PF14561.6 gi|16082148|ref|NP_394586.1| - 1e-10 41.8 14.5 3.8e-05 24.0 2.2 5.9 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|16082148|ref|NP_394586.1| - 2.9e-09 36.5 7.6 0.0025 17.1 0.4 5.2 1 1 5 6 6 6 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|16082148|ref|NP_394586.1| - 1.5e-08 34.0 14.6 0.00044 19.3 0.1 3.4 2 1 0 3 3 3 3 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|16082148|ref|NP_394586.1| - 2.1e-07 31.5 0.0 0.96 9.9 0.0 4.2 4 0 0 4 4 4 1 Bacterial transcriptional activator domain Alkyl_sulf_dimr PF14863.6 gi|16082148|ref|NP_394586.1| - 1.1e-06 29.1 2.4 0.12 12.9 0.4 4.0 3 2 2 5 5 3 2 Alkyl sulfatase dimerisation TPR_6 PF13174.6 gi|16082148|ref|NP_394586.1| - 2.6e-06 27.7 20.5 0.48 11.2 0.3 9.0 10 0 0 10 10 9 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|16082148|ref|NP_394586.1| - 1.1e-05 25.5 0.0 6.2 7.8 0.0 5.1 7 0 0 7 7 3 0 Tetratricopeptide repeat TPR_21 PF09976.9 gi|16082148|ref|NP_394586.1| - 1.6e-05 24.7 8.1 0.79 9.4 4.1 4.3 2 1 2 4 4 4 2 Tetratricopeptide repeat-like domain TPR_10 PF13374.6 gi|16082148|ref|NP_394586.1| - 0.00016 21.4 7.6 6.5 6.8 0.1 7.4 8 1 0 8 8 7 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|16082148|ref|NP_394586.1| - 0.00024 21.1 7.8 1.5 9.0 0.0 4.5 4 0 0 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|16082148|ref|NP_394586.1| - 0.00076 19.3 15.2 0.78 9.9 1.2 7.3 8 0 0 8 8 6 1 Tetratricopeptide repeat TAF1_subA PF14929.6 gi|16082148|ref|NP_394586.1| - 0.0043 16.5 3.4 9.7 5.5 0.3 3.8 2 1 2 4 4 4 0 TAF RNA Polymerase I subunit A MADF_DNA_bdg PF10545.9 gi|16082148|ref|NP_394586.1| - 0.0055 17.0 0.3 0.016 15.5 0.3 1.8 1 0 0 1 1 1 1 Alcohol dehydrogenase transcription factor Myb/SANT-like ChAPs PF09295.10 gi|16082148|ref|NP_394586.1| - 0.011 14.8 0.0 2.2 7.2 0.0 3.0 2 1 0 3 3 3 0 ChAPs (Chs5p-Arf1p-binding proteins) TPR_MalT PF17874.1 gi|16082148|ref|NP_394586.1| - 0.045 13.1 0.1 2.2 7.6 0.1 3.3 2 1 0 2 2 2 0 MalT-like TPR region SesA PF17107.5 gi|16082148|ref|NP_394586.1| - 0.068 13.4 0.2 0.6 10.3 0.3 2.4 2 0 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Type_III_YscG PF09477.10 gi|16082148|ref|NP_394586.1| - 0.079 13.0 0.2 0.83 9.7 0.0 2.8 4 0 0 4 4 2 0 Bacterial type II secretion system chaperone protein (type_III_yscG) HemY_N PF07219.13 gi|16082148|ref|NP_394586.1| - 0.11 12.8 1.6 33 4.7 0.1 3.5 4 0 0 4 4 3 0 HemY protein N-terminus PPR PF01535.20 gi|16082148|ref|NP_394586.1| - 0.14 12.5 2.6 28 5.3 0.0 5.3 6 1 0 7 7 4 0 PPR repeat AAA_assoc_2 PF16193.5 gi|16082148|ref|NP_394586.1| - 0.14 12.5 3.5 19 5.7 0.1 4.2 3 1 1 4 4 4 0 AAA C-terminal domain DUF627 PF04781.12 gi|16082148|ref|NP_394586.1| - 0.35 10.9 4.6 7.4 6.6 0.3 3.8 5 0 0 5 5 3 0 Protein of unknown function (DUF627) DUF5113 PF17140.4 gi|16082148|ref|NP_394586.1| - 0.63 9.8 6.0 7.1 6.4 0.1 4.1 4 2 1 5 5 5 0 Domain of unknown function (DUF5113) TPR_3 PF07720.12 gi|16082148|ref|NP_394586.1| - 1.6 8.8 13.5 0.21 11.6 0.3 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat HEPN PF05168.14 gi|16082148|ref|NP_394586.1| - 7.2 6.8 14.3 0.98 9.6 2.3 4.1 3 2 1 4 4 3 0 HEPN domain Cecropin PF00272.19 gi|16082592|ref|NP_394587.1| - 0.0042 16.8 0.2 0.008 15.9 0.2 1.5 1 0 0 1 1 1 1 Cecropin family Acetyltransf_6 PF13480.7 gi|16082592|ref|NP_394587.1| - 0.16 12.1 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Pyr_redox_2 PF07992.14 gi|16082149|ref|NP_394588.1| - 1e-14 54.5 0.0 1.9e-09 37.2 0.0 2.0 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|16082149|ref|NP_394588.1| - 0.15 12.3 0.0 0.39 11.0 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Ribosomal_S13_N PF08069.12 gi|16082150|ref|NP_394589.1| - 1e-23 83.1 0.7 1.8e-23 82.4 0.7 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|16082150|ref|NP_394589.1| - 1.3e-09 38.1 0.2 1.9e-09 37.6 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 DHHA1 PF02272.19 gi|16082593|ref|NP_394590.1| - 5.5e-17 62.5 0.0 1.7e-16 60.9 0.0 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|16082593|ref|NP_394590.1| - 1.5e-05 25.1 0.0 3.2e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 DHH family Plk4_PB1 PF18190.1 gi|16082151|ref|NP_394591.1| - 0.064 13.4 0.4 0.14 12.3 0.4 1.6 1 1 0 1 1 1 0 Polo-like Kinase 4 Polo Box 1 CARDB PF07705.11 gi|16082152|ref|NP_394592.1| - 5.4e-06 26.6 0.9 5.4e-06 26.6 0.9 2.2 2 1 0 2 2 2 1 CARDB Wzt_C PF14524.6 gi|16082152|ref|NP_394592.1| - 0.0055 16.7 0.4 0.23 11.5 0.1 2.2 2 0 0 2 2 2 1 Wzt C-terminal domain CBM_35 PF16990.5 gi|16082152|ref|NP_394592.1| - 0.023 14.9 1.0 0.49 10.7 0.2 2.2 2 0 0 2 2 2 0 Carbohydrate binding module (family 35) DUF1573 PF07610.11 gi|16082152|ref|NP_394592.1| - 0.16 12.0 0.9 0.49 10.5 0.1 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1573) PMT_2 PF13231.6 gi|16082153|ref|NP_394593.1| - 3.8e-12 46.7 4.7 3.8e-12 46.7 4.7 4.3 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase CarboxypepD_reg PF13620.6 gi|16082153|ref|NP_394593.1| - 1.4e-06 28.5 0.4 1.4e-06 28.5 0.4 8.8 8 1 1 10 10 10 3 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|16082153|ref|NP_394593.1| - 0.0027 17.7 18.1 0.063 13.3 0.1 5.3 5 1 1 6 6 6 2 CarboxypepD_reg-like domain DUF1416 PF07210.12 gi|16082153|ref|NP_394593.1| - 0.02 14.8 0.0 0.11 12.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1416) Pcc1 PF09341.10 gi|298205268|ref|YP_003717784.1| - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 Prefoldin_2 PF01920.20 gi|16082154|ref|NP_394594.1| - 3e-19 68.9 18.8 3.5e-19 68.7 18.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit ATG16 PF08614.11 gi|16082154|ref|NP_394594.1| - 0.00024 21.4 15.4 0.00047 20.5 2.6 2.0 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) Laminin_I PF06008.14 gi|16082154|ref|NP_394594.1| - 0.0044 16.7 10.8 0.042 13.5 2.8 2.0 1 1 1 2 2 2 2 Laminin Domain I FlaC_arch PF05377.11 gi|16082154|ref|NP_394594.1| - 0.0057 17.0 11.8 0.056 13.8 2.4 2.5 2 1 0 2 2 2 2 Flagella accessory protein C (FlaC) BLOC1_2 PF10046.9 gi|16082154|ref|NP_394594.1| - 0.0069 16.7 13.3 0.35 11.2 2.2 2.6 1 1 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sin3_corepress PF08295.12 gi|16082154|ref|NP_394594.1| - 0.0092 16.0 2.9 0.029 14.4 0.2 2.1 2 0 0 2 2 2 1 Sin3 family co-repressor COG5 PF10392.9 gi|16082154|ref|NP_394594.1| - 0.0095 16.1 1.3 0.0095 16.1 1.3 2.1 2 0 0 2 2 2 1 Golgi transport complex subunit 5 Prefoldin PF02996.17 gi|16082154|ref|NP_394594.1| - 0.02 14.8 13.8 0.43 10.5 1.1 2.4 1 1 1 2 2 2 0 Prefoldin subunit DUF4164 PF13747.6 gi|16082154|ref|NP_394594.1| - 0.043 14.1 11.3 0.23 11.8 1.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) Sec34 PF04136.15 gi|16082154|ref|NP_394594.1| - 0.044 13.7 9.7 0.11 12.3 2.4 2.2 2 0 0 2 2 2 0 Sec34-like family YkyA PF10368.9 gi|16082154|ref|NP_394594.1| - 0.051 13.2 16.2 0.087 12.5 16.2 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF3585 PF12130.8 gi|16082154|ref|NP_394594.1| - 0.059 13.5 1.6 0.059 13.5 1.6 2.5 1 1 1 2 2 2 0 Bivalent Mical/EHBP Rab binding domain DUF4105 PF13387.6 gi|16082154|ref|NP_394594.1| - 0.072 12.7 0.5 0.072 12.7 0.5 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4105) PilJ PF13675.6 gi|16082154|ref|NP_394594.1| - 0.086 12.9 4.6 0.41 10.7 0.4 2.1 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF3450 PF11932.8 gi|16082154|ref|NP_394594.1| - 0.14 11.5 17.0 0.07 12.4 4.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 gi|16082154|ref|NP_394594.1| - 0.16 12.0 16.3 0.25 11.4 3.6 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 gi|16082154|ref|NP_394594.1| - 0.19 11.8 6.8 0.43 10.6 6.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|16082154|ref|NP_394594.1| - 0.26 11.6 5.3 0.49 10.7 1.1 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 gi|16082154|ref|NP_394594.1| - 0.27 11.3 9.9 6.1 6.9 9.8 2.0 1 1 0 1 1 1 0 Laminin Domain II DUF4407 PF14362.6 gi|16082154|ref|NP_394594.1| - 0.3 10.4 8.7 0.42 9.9 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF773 PF05600.12 gi|16082154|ref|NP_394594.1| - 0.39 9.4 12.5 1.2 7.7 1.9 2.0 2 0 0 2 2 2 0 CDK5 regulatory subunit-associated protein 3 Med4 PF10018.9 gi|16082154|ref|NP_394594.1| - 0.49 10.0 12.5 1.3 8.6 1.1 2.1 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Sipho_Gp157 PF05565.11 gi|16082154|ref|NP_394594.1| - 0.54 10.3 13.6 1.2 9.2 13.5 1.5 1 1 0 1 1 1 0 Siphovirus Gp157 Fib_alpha PF08702.10 gi|16082154|ref|NP_394594.1| - 0.58 10.3 13.1 0.65 10.2 12.2 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family PCRF PF03462.18 gi|16082154|ref|NP_394594.1| - 0.75 9.6 8.2 1.1 9.0 8.0 1.3 1 1 0 1 1 1 0 PCRF domain STAT_alpha PF01017.20 gi|16082154|ref|NP_394594.1| - 0.89 9.4 14.9 2.4 8.0 4.3 2.0 1 1 1 2 2 2 0 STAT protein, all-alpha domain GIT_CC PF16559.5 gi|16082154|ref|NP_394594.1| - 1.2 9.0 12.4 3.5 7.6 2.9 2.4 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Seryl_tRNA_N PF02403.22 gi|16082154|ref|NP_394594.1| - 1.6 9.0 14.2 28 5.0 14.5 2.1 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DivIC PF04977.15 gi|16082154|ref|NP_394594.1| - 1.7 8.4 16.6 3.3 7.6 4.4 2.3 2 0 0 2 2 2 0 Septum formation initiator V_ATPase_I PF01496.19 gi|16082154|ref|NP_394594.1| - 2.3 6.1 8.7 3.9 5.3 8.6 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family E2F_CC-MB PF16421.5 gi|16082154|ref|NP_394594.1| - 2.3 8.6 14.2 2 8.8 3.4 2.6 1 1 2 3 3 3 0 E2F transcription factor CC-MB domain DUF4200 PF13863.6 gi|16082154|ref|NP_394594.1| - 2.7 8.4 19.9 2.1e+02 2.3 19.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Cnn_1N PF07989.11 gi|16082154|ref|NP_394594.1| - 3.3 7.9 17.4 0.88 9.8 5.4 2.4 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 gi|16082154|ref|NP_394594.1| - 4.5 7.3 20.7 1.6 8.8 8.3 2.0 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CENP-H PF05837.12 gi|16082154|ref|NP_394594.1| - 4.7 7.7 14.9 82 3.7 13.1 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) YlqD PF11068.8 gi|16082154|ref|NP_394594.1| - 4.7 7.6 17.3 2.4 8.6 6.6 2.1 1 1 1 2 2 2 0 YlqD protein DPM3 PF08285.11 gi|16082154|ref|NP_394594.1| - 5.1 7.4 5.0 4.5 7.5 0.1 2.7 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Snf7 PF03357.21 gi|16082154|ref|NP_394594.1| - 5.9 6.4 18.8 1.7 8.2 5.6 2.4 1 1 1 2 2 2 0 Snf7 Spc24 PF08286.11 gi|16082154|ref|NP_394594.1| - 6.9 7.0 16.1 5.9 7.2 4.6 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 FapA PF03961.13 gi|16082154|ref|NP_394594.1| - 7.6 5.0 14.0 14 4.1 14.0 1.5 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF1366 PF07104.11 gi|16082154|ref|NP_394594.1| - 8.4 6.1 10.6 14 5.4 1.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1366) MerR-DNA-bind PF09278.11 gi|16082154|ref|NP_394594.1| - 8.8 7.0 13.1 6.9 7.3 1.5 3.1 2 2 0 2 2 2 0 MerR, DNA binding Spt5_N PF11942.8 gi|16082154|ref|NP_394594.1| - 8.8 7.4 11.1 4.4 8.4 4.1 2.4 1 1 1 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal GCHY-1 PF02649.14 gi|16082155|ref|NP_394595.1| - 1.3e-60 205.2 0.1 1.4e-60 205.0 0.1 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 Thiamine_BP PF01910.17 gi|16082155|ref|NP_394595.1| - 0.05 13.5 0.2 11 6.1 0.0 2.7 2 0 0 2 2 2 0 Thiamine-binding protein MEIOC PF15189.6 gi|16082155|ref|NP_394595.1| - 0.052 13.2 0.2 0.14 11.8 0.1 1.7 1 1 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC PerC PF06069.11 gi|16082155|ref|NP_394595.1| - 0.11 12.8 0.0 0.3 11.4 0.0 1.8 2 0 0 2 2 2 0 PerC transcriptional activator Preseq_ALAS PF09029.10 gi|16082155|ref|NP_394595.1| - 0.11 12.9 0.0 4.6 7.7 0.0 2.2 2 0 0 2 2 2 0 5-aminolevulinate synthase presequence CTP_transf_like PF01467.26 gi|16082156|ref|NP_394596.1| - 8.4e-17 61.7 0.1 9.8e-17 61.5 0.1 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|16082156|ref|NP_394596.1| - 0.01 15.7 0.8 0.045 13.6 0.4 2.0 1 1 1 2 2 2 0 FAD synthetase Acetyltransf_1 PF00583.25 gi|16082157|ref|NP_394597.1| - 5.7e-15 55.6 0.0 7.3e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16082157|ref|NP_394597.1| - 2e-11 44.0 0.0 2.5e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|16082157|ref|NP_394597.1| - 2.8e-11 43.7 0.0 3.8e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|16082157|ref|NP_394597.1| - 6.2e-09 35.7 0.0 9.1e-09 35.2 0.0 1.3 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|16082157|ref|NP_394597.1| - 1.1e-07 31.9 0.0 8.8e-07 29.1 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|16082157|ref|NP_394597.1| - 9e-05 23.2 0.0 0.00026 21.7 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 gi|16082157|ref|NP_394597.1| - 0.00015 21.6 0.0 0.0012 18.6 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|16082157|ref|NP_394597.1| - 0.00032 20.4 0.0 0.00086 19.0 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|16082157|ref|NP_394597.1| - 0.0015 18.7 0.1 0.002 18.3 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|16082157|ref|NP_394597.1| - 0.045 13.9 0.0 0.13 12.5 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 gi|16082157|ref|NP_394597.1| - 0.073 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase HIT PF01230.23 gi|16082158|ref|NP_394598.1| - 5.8e-21 75.1 0.2 1.2e-20 74.0 0.1 1.4 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 gi|16082158|ref|NP_394598.1| - 8.4e-13 48.8 0.0 1.3e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|16082158|ref|NP_394598.1| - 1.2e-08 34.9 0.6 1.8e-08 34.3 0.6 1.2 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 AFOR_C PF01314.18 gi|16082159|ref|NP_394599.1| - 8e-83 278.5 0.0 1e-82 278.2 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|16082159|ref|NP_394599.1| - 9e-69 231.3 0.2 1.6e-68 230.5 0.2 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain E1-E2_ATPase PF00122.20 gi|16082160|ref|NP_394600.1| - 3.2e-49 166.9 0.7 3.2e-49 166.9 0.7 2.1 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|16082160|ref|NP_394600.1| - 1.5e-28 100.6 0.2 3.1e-28 99.5 0.2 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase YHS PF04945.13 gi|16082160|ref|NP_394600.1| - 3.9e-17 62.1 0.4 7.6e-17 61.2 0.4 1.5 1 0 0 1 1 1 1 YHS domain Hydrolase_3 PF08282.12 gi|16082160|ref|NP_394600.1| - 1.6e-09 37.9 1.0 2.9e-05 23.9 0.2 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|16082160|ref|NP_394600.1| - 0.00028 21.0 0.4 0.0038 17.3 0.4 2.5 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|16082160|ref|NP_394600.1| - 0.0044 17.1 0.0 0.029 14.5 0.0 2.2 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase zf-FCS PF06467.14 gi|16082160|ref|NP_394600.1| - 0.0075 16.2 0.8 0.016 15.1 0.8 1.5 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif YHS PF04945.13 gi|16082161|ref|NP_394601.1| - 6.8e-22 77.3 2.4 7.1e-22 77.3 2.4 1.0 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|16082161|ref|NP_394601.1| - 0.002 18.0 0.9 0.0024 17.7 0.9 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif ATPase-cat_bd PF12156.8 gi|16082161|ref|NP_394601.1| - 0.0085 16.8 0.3 0.01 16.5 0.3 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase DUF2116 PF09889.9 gi|16082161|ref|NP_394601.1| - 0.016 15.2 0.9 0.094 12.7 0.4 1.9 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF1059 PF06348.11 gi|16082656|ref|NP_394602.1| - 9e-24 83.5 0.8 1e-23 83.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) QRPTase_C PF01729.19 gi|16082162|ref|NP_394603.1| - 5.2e-21 75.2 0.0 7e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.19 gi|16082162|ref|NP_394603.1| - 0.0051 16.2 0.0 0.009 15.4 0.0 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family NAPRTase_C PF17956.1 gi|16082162|ref|NP_394603.1| - 0.0099 16.3 0.0 0.023 15.1 0.0 1.6 2 0 0 2 2 2 1 Nicotinate phosphoribosyltransferase C-terminal domain tRNA-synt_1e PF01406.19 gi|16082163|ref|NP_394604.1| - 1.3e-118 395.8 0.2 1.6e-118 395.5 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|16082163|ref|NP_394604.1| - 4.5e-18 65.2 1.3 3.6e-09 35.8 0.2 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|16082163|ref|NP_394604.1| - 2.7e-07 29.3 0.0 0.00017 20.0 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|16082163|ref|NP_394604.1| - 3.5e-06 26.2 0.1 0.0018 17.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|16082163|ref|NP_394604.1| - 0.00051 19.1 0.1 0.0015 17.6 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetases class I (R) tRNA-synt_1c PF00749.21 gi|16082163|ref|NP_394604.1| - 0.35 9.7 5.8 7.4 5.4 2.2 3.0 2 1 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain DNA_ligase_A_M PF01068.21 gi|16082164|ref|NP_394605.1| - 5.5e-57 192.7 0.0 8.8e-57 192.0 0.0 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|16082164|ref|NP_394605.1| - 8.8e-37 127.1 1.3 2e-36 125.9 1.3 1.6 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|16082164|ref|NP_394605.1| - 8.1e-21 74.5 0.0 1.6e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region mRNA_cap_enzyme PF01331.19 gi|16082164|ref|NP_394605.1| - 0.0098 15.7 0.0 0.73 9.6 0.0 2.4 2 0 0 2 2 2 1 mRNA capping enzyme, catalytic domain DNA_ligase_OB_2 PF14743.6 gi|16082164|ref|NP_394605.1| - 0.025 14.6 0.2 0.2 11.7 0.0 2.4 3 0 0 3 3 3 0 DNA ligase OB-like domain REPA_OB_2 PF16900.5 gi|16082165|ref|NP_394606.1| - 4.1e-05 23.4 0.1 5.2e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 Replication protein A OB domain tRNA_anti-codon PF01336.25 gi|16082165|ref|NP_394606.1| - 0.0003 20.7 0.7 0.00046 20.1 0.7 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|16082165|ref|NP_394606.1| - 0.042 13.5 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 DUF3127 PF11325.8 gi|16082165|ref|NP_394606.1| - 0.058 13.6 0.1 0.12 12.6 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3127) DUF4131 PF13567.6 gi|16082165|ref|NP_394606.1| - 0.068 12.8 0.1 0.1 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Toprim PF01751.22 gi|16082657|ref|NP_394607.1| - 0.0063 16.7 0.0 0.0086 16.3 0.0 1.5 1 1 0 1 1 1 1 Toprim domain ATP-grasp_5 PF13549.6 gi|16082167|ref|NP_394609.1| - 6.4e-73 244.9 0.3 9e-73 244.4 0.3 1.2 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|16082167|ref|NP_394609.1| - 2.5e-45 153.7 0.2 7.7e-45 152.1 0.2 1.9 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|16082167|ref|NP_394609.1| - 5.8e-23 81.6 0.0 1.9e-22 80.0 0.0 1.9 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|16082167|ref|NP_394609.1| - 7.1e-15 55.5 0.4 3.6e-14 53.2 0.2 2.4 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|16082167|ref|NP_394609.1| - 1e-06 28.5 0.0 1.5e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|16082167|ref|NP_394609.1| - 0.00035 20.4 0.9 0.00074 19.3 0.1 1.9 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FAA_hydrolase PF01557.18 gi|16082594|ref|NP_394610.1| - 2.4e-66 223.5 0.0 3e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family KH_2 PF07650.17 gi|16082594|ref|NP_394610.1| - 0.016 15.0 0.1 0.03 14.1 0.1 1.4 1 0 0 1 1 1 0 KH domain Lactamase_B_2 PF12706.7 gi|16082168|ref|NP_394611.1| - 2.3e-22 79.5 0.0 1.4e-10 41.1 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|16082168|ref|NP_394611.1| - 6.6e-07 29.5 0.1 5.2e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|16082168|ref|NP_394611.1| - 0.00013 21.5 0.0 0.00024 20.7 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease PDEase_II PF02112.15 gi|16082168|ref|NP_394611.1| - 0.00081 18.6 0.1 0.0012 18.0 0.1 1.2 1 0 0 1 1 1 1 cAMP phosphodiesterases class-II IMS_HHH PF11798.8 gi|16082168|ref|NP_394611.1| - 0.093 13.1 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 IMS family HHH motif DHDPS PF00701.22 gi|16082170|ref|NP_394613.1| - 5.6e-58 195.9 0.0 6.3e-58 195.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Fe-ADH_2 PF13685.6 gi|16082171|ref|NP_394614.1| - 6.1e-64 216.1 1.0 7.6e-64 215.8 1.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|16082171|ref|NP_394614.1| - 3.2e-18 65.7 1.3 1e-17 64.0 1.3 1.7 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|16082171|ref|NP_394614.1| - 1.7e-07 30.7 1.4 5.5e-05 22.4 1.2 2.8 2 1 0 2 2 2 2 3-dehydroquinate synthase UPF0179 PF03684.13 gi|16082172|ref|NP_394615.1| - 4.6e-44 149.7 6.7 5.2e-44 149.5 6.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DUF2118 PF09891.9 gi|16082172|ref|NP_394615.1| - 0.04 13.9 0.1 0.059 13.3 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) RNA_pol_Rpb6 PF01192.22 gi|16082173|ref|NP_394616.1| - 1e-13 50.9 0.1 1.3e-13 50.7 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 AA_permease PF00324.21 gi|16082595|ref|NP_394617.1| - 1.1e-78 265.0 53.5 1.2e-78 264.8 53.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16082595|ref|NP_394617.1| - 4.7e-16 58.6 60.9 2.4e-14 53.0 45.9 2.0 1 1 1 2 2 2 2 Amino acid permease DUF4059 PF13268.6 gi|16082595|ref|NP_394617.1| - 1.1 9.7 6.6 18 5.9 0.0 4.0 3 1 1 4 4 4 0 Protein of unknown function (DUF4059) tRNA-synt_1g PF09334.11 gi|16082174|ref|NP_394618.1| - 4.3e-150 499.8 0.0 5.1e-150 499.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|16082174|ref|NP_394618.1| - 9.4e-16 57.2 0.0 7.1e-10 37.8 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|16082174|ref|NP_394618.1| - 4.8e-07 29.4 0.0 0.001 18.5 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|16082174|ref|NP_394618.1| - 0.0046 15.9 0.0 0.0096 14.9 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) Anticodon_1 PF08264.13 gi|16082174|ref|NP_394618.1| - 0.11 12.4 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 Anticodon-binding domain of tRNA Phage_tail_L PF05100.12 gi|16082174|ref|NP_394618.1| - 0.17 11.2 0.1 0.3 10.4 0.1 1.3 1 0 0 1 1 1 0 Phage minor tail protein L DZR PF12773.7 gi|16082174|ref|NP_394618.1| - 1.7 8.8 4.7 3.7 7.7 4.7 1.5 1 1 0 1 1 1 0 Double zinc ribbon tRNA-synt_1f PF01921.18 gi|16082175|ref|NP_394619.1| - 3.5e-119 397.9 0.0 7.4e-119 396.9 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|16082175|ref|NP_394619.1| - 6e-05 22.0 0.0 0.083 11.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) Pribosyltran PF00156.27 gi|16082176|ref|NP_394620.1| - 7.5e-13 48.3 0.1 1.2e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Sigma70_r4_2 PF08281.12 gi|16082176|ref|NP_394620.1| - 0.00066 19.3 0.0 0.0013 18.3 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|16082176|ref|NP_394620.1| - 0.0019 17.9 0.0 0.0055 16.5 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_24 PF13412.6 gi|16082176|ref|NP_394620.1| - 0.0041 16.7 0.0 0.0088 15.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|16082176|ref|NP_394620.1| - 0.0053 16.3 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family PRTase_2 PF15609.6 gi|16082176|ref|NP_394620.1| - 0.0069 15.9 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase TnsD PF15978.5 gi|16082176|ref|NP_394620.1| - 0.17 10.8 0.1 0.27 10.2 0.1 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D MFS_1 PF07690.16 gi|16082177|ref|NP_394621.1| - 5.7e-17 61.7 43.4 7.5e-14 51.4 18.2 2.7 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16082177|ref|NP_394621.1| - 2.4e-16 59.6 31.8 2.3e-14 53.1 31.6 2.4 1 1 0 1 1 1 1 Sugar (and other) transporter MarR PF01047.22 gi|16082178|ref|NP_394622.1| - 7.7e-18 64.2 0.0 1.5e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|16082178|ref|NP_394622.1| - 8.4e-10 38.4 0.0 1.2e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|16082178|ref|NP_394622.1| - 8.4e-08 31.7 0.0 4.4e-06 26.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|16082178|ref|NP_394622.1| - 1.5e-06 28.6 0.0 2.6e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|16082178|ref|NP_394622.1| - 7.7e-06 25.7 0.0 2e-05 24.4 0.0 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|16082178|ref|NP_394622.1| - 8.8e-05 22.6 0.0 0.00014 22.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_AsnC-type PF13404.6 gi|16082178|ref|NP_394622.1| - 0.00057 19.7 0.0 0.024 14.5 0.0 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|16082178|ref|NP_394622.1| - 0.0011 18.8 0.0 0.0021 18.0 0.0 1.5 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_micro PF17007.5 gi|16082178|ref|NP_394622.1| - 0.0013 17.7 0.5 0.0013 17.6 0.5 1.0 1 0 0 1 1 1 1 HTH-like Fe_dep_repress PF01325.19 gi|16082178|ref|NP_394622.1| - 0.0017 18.5 0.0 0.004 17.3 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|16082178|ref|NP_394622.1| - 0.0063 16.8 0.0 0.015 15.6 0.0 1.6 2 0 0 2 2 1 1 Transcriptional regulator FeoC PF09012.10 gi|16082178|ref|NP_394622.1| - 0.0073 16.4 0.1 0.026 14.6 0.0 1.9 2 0 0 2 2 2 1 FeoC like transcriptional regulator Penicillinase_R PF03965.16 gi|16082178|ref|NP_394622.1| - 0.024 15.0 0.1 0.036 14.4 0.1 1.4 1 1 0 1 1 1 0 Penicillinase repressor HTH_54 PF18607.1 gi|16082178|ref|NP_394622.1| - 0.035 14.2 0.0 0.054 13.6 0.0 1.4 1 0 0 1 1 1 0 ParA helix turn helix domain HTH_11 PF08279.12 gi|16082178|ref|NP_394622.1| - 0.063 13.2 0.0 0.13 12.2 0.0 1.6 1 1 0 1 1 1 0 HTH domain HTH_20 PF12840.7 gi|16082178|ref|NP_394622.1| - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|16082178|ref|NP_394622.1| - 0.13 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Ribosomal_S3Ae PF01015.18 gi|16082179|ref|NP_394623.1| - 4.2e-51 173.4 1.6 5.2e-51 173.1 1.6 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family N6_N4_Mtase PF01555.18 gi|16082180|ref|NP_394624.1| - 1.4e-60 204.9 0.7 1.9e-60 204.5 0.7 1.2 1 0 0 1 1 1 1 DNA methylase RAMA PF18755.1 gi|16082180|ref|NP_394624.1| - 3.2e-17 62.9 0.0 6.9e-17 61.8 0.0 1.6 1 0 0 1 1 1 1 Restriction Enzyme Adenine Methylase Associated UPF0020 PF01170.18 gi|16082180|ref|NP_394624.1| - 4.5e-05 23.2 0.0 0.02 14.6 0.0 2.3 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|16082180|ref|NP_394624.1| - 0.00015 21.4 0.0 0.049 13.3 0.0 2.2 2 0 0 2 2 2 2 Conserved hypothetical protein 95 MethyltransfD12 PF02086.15 gi|16082180|ref|NP_394624.1| - 0.0018 18.0 0.1 0.52 10.0 0.0 2.5 2 0 0 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase Met_10 PF02475.16 gi|16082180|ref|NP_394624.1| - 0.016 15.0 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|16082180|ref|NP_394624.1| - 0.047 13.3 0.0 2.3 7.8 0.0 2.7 3 0 0 3 3 3 0 RNA cap guanine-N2 methyltransferase NicO PF03824.16 gi|16082181|ref|NP_394625.1| - 5.2e-98 327.9 11.2 6.7e-98 327.5 11.2 1.1 1 0 0 1 1 1 1 High-affinity nickel-transport protein MRAP PF15183.6 gi|16082181|ref|NP_394625.1| - 0.022 14.7 1.1 0.11 12.5 0.4 2.3 2 0 0 2 2 2 0 Melanocortin-2 receptor accessory protein family TusA PF01206.17 gi|16082182|ref|NP_394626.1| - 9.1e-21 73.5 0.0 1e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 gi|16082658|ref|NP_394627.1| - 2.2e-18 66.6 4.7 1.6e-15 57.3 4.7 2.0 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|16082658|ref|NP_394627.1| - 0.0056 17.0 0.1 0.0079 16.6 0.1 1.4 1 1 0 1 1 1 1 DsrE/DsrF-like family EF_assoc_1 PF08355.12 gi|16082658|ref|NP_394627.1| - 0.12 12.0 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 EF hand associated DUF981 PF06168.11 gi|16082183|ref|NP_394628.1| - 1.8e-52 178.0 22.6 2e-52 177.9 22.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF373 PF04123.13 gi|16082183|ref|NP_394628.1| - 0.53 9.7 16.2 0.25 10.7 9.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Saf_2TM PF18303.1 gi|16082183|ref|NP_394628.1| - 0.7 9.5 0.0 0.7 9.5 0.0 2.9 2 1 1 3 3 3 0 SAVED-fused 2TM effector domain HTH_5 PF01022.20 gi|16082184|ref|NP_394629.1| - 2e-05 24.4 0.2 3.5e-05 23.6 0.1 1.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|16082184|ref|NP_394629.1| - 0.031 14.3 0.0 0.044 13.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain AAA PF00004.29 gi|16082186|ref|NP_394631.1| - 2.3e-40 138.1 0.0 4.4e-40 137.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|16082186|ref|NP_394631.1| - 1.8e-10 40.5 0.0 3.9e-10 39.4 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 gi|16082186|ref|NP_394631.1| - 2.5e-06 28.0 0.0 6.5e-06 26.6 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_2 PF07724.14 gi|16082186|ref|NP_394631.1| - 1.7e-05 25.0 0.0 5.6e-05 23.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|16082186|ref|NP_394631.1| - 4.3e-05 23.5 0.0 0.00048 20.1 0.0 2.7 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|16082186|ref|NP_394631.1| - 9.3e-05 22.3 0.0 0.00024 21.0 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|16082186|ref|NP_394631.1| - 0.00039 20.7 0.0 0.0024 18.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 gi|16082186|ref|NP_394631.1| - 0.0011 18.7 0.0 0.0038 17.0 0.0 1.8 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 gi|16082186|ref|NP_394631.1| - 0.0014 19.1 0.0 0.004 17.7 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_14 PF13173.6 gi|16082186|ref|NP_394631.1| - 0.0021 18.1 0.0 0.0064 16.5 0.0 1.8 2 0 0 2 2 1 1 AAA domain ResIII PF04851.15 gi|16082186|ref|NP_394631.1| - 0.003 17.6 0.1 0.15 12.1 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.26 gi|16082186|ref|NP_394631.1| - 0.0036 17.0 0.0 0.055 13.2 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|16082186|ref|NP_394631.1| - 0.0041 16.9 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 gi|16082186|ref|NP_394631.1| - 0.005 16.1 0.0 0.0085 15.3 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain Mg_chelatase PF01078.21 gi|16082186|ref|NP_394631.1| - 0.006 16.0 0.1 0.13 11.6 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|16082186|ref|NP_394631.1| - 0.0064 16.9 0.0 0.019 15.3 0.0 1.9 1 0 0 1 1 1 1 RNA helicase Vps4_C PF09336.10 gi|16082186|ref|NP_394631.1| - 0.0072 16.3 0.0 0.071 13.1 0.0 2.5 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|16082186|ref|NP_394631.1| - 0.0078 16.8 0.0 0.017 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 gi|16082186|ref|NP_394631.1| - 0.011 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region MIT PF04212.18 gi|16082186|ref|NP_394631.1| - 0.011 15.7 1.8 0.023 14.7 0.7 2.0 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain AAA_30 PF13604.6 gi|16082186|ref|NP_394631.1| - 0.015 15.0 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|16082186|ref|NP_394631.1| - 0.016 15.0 0.0 0.04 13.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|16082186|ref|NP_394631.1| - 0.018 14.6 0.1 0.41 10.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 gi|16082186|ref|NP_394631.1| - 0.018 14.2 0.0 0.033 13.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 gi|16082186|ref|NP_394631.1| - 0.023 14.5 0.0 0.041 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 gi|16082186|ref|NP_394631.1| - 0.023 13.8 0.0 0.04 13.1 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA_19 PF13245.6 gi|16082186|ref|NP_394631.1| - 0.024 15.0 0.0 0.052 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|16082186|ref|NP_394631.1| - 0.024 14.5 0.0 0.056 13.3 0.0 1.8 1 1 0 1 1 1 0 Bacterial dnaA protein KAP_NTPase PF07693.14 gi|16082186|ref|NP_394631.1| - 0.042 13.1 0.0 0.063 12.5 0.0 1.3 1 0 0 1 1 1 0 KAP family P-loop domain MCM PF00493.23 gi|16082186|ref|NP_394631.1| - 0.046 12.8 0.0 0.098 11.7 0.0 1.5 1 0 0 1 1 1 0 MCM P-loop domain AAA_33 PF13671.6 gi|16082186|ref|NP_394631.1| - 0.047 13.9 0.0 0.091 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|16082186|ref|NP_394631.1| - 0.05 13.3 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Rad17 PF03215.15 gi|16082186|ref|NP_394631.1| - 0.057 13.3 0.0 0.1 12.5 0.0 1.5 1 1 0 1 1 1 0 Rad17 P-loop domain TsaE PF02367.17 gi|16082186|ref|NP_394631.1| - 0.065 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 gi|16082186|ref|NP_394631.1| - 0.072 12.8 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 gi|16082186|ref|NP_394631.1| - 0.094 12.6 0.0 1.2 9.1 0.0 2.2 1 1 1 2 2 2 0 NACHT domain AAA_6 PF12774.7 gi|16082186|ref|NP_394631.1| - 0.12 11.3 0.0 0.36 9.8 0.0 1.8 1 1 1 2 2 2 0 Hydrolytic ATP binding site of dynein motor region Parvo_NS1 PF01057.17 gi|16082186|ref|NP_394631.1| - 0.13 11.3 0.0 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_23 PF13476.6 gi|16082186|ref|NP_394631.1| - 0.61 10.6 0.1 0.61 10.6 0.1 2.4 3 1 0 3 3 3 0 AAA domain AAA_assoc_C PF09821.9 gi|16082187|ref|NP_394632.1| - 1.2e-30 106.5 0.0 1.5e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 C-terminal AAA-associated domain RAC_head PF16717.5 gi|16082187|ref|NP_394632.1| - 0.0069 17.3 0.0 0.011 16.7 0.0 1.3 1 0 0 1 1 1 1 Ribosome-associated complex head domain Methyltransf_5 PF01795.19 gi|16082187|ref|NP_394632.1| - 0.016 14.7 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 MraW methylase family BPD_transp_1 PF00528.22 gi|16082188|ref|NP_394633.1| - 1.4e-14 54.3 45.3 3e-10 40.1 14.8 3.3 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|16082596|ref|NP_394634.1| - 3.1e-26 92.5 0.0 4.6e-26 92.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16082596|ref|NP_394634.1| - 1.3e-05 25.2 0.6 0.0046 16.8 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|16082596|ref|NP_394634.1| - 2.8e-05 24.6 0.0 4.5e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|16082596|ref|NP_394634.1| - 0.00019 21.1 0.0 0.0022 17.7 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|16082596|ref|NP_394634.1| - 0.00044 20.1 0.0 0.00063 19.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|16082596|ref|NP_394634.1| - 0.00046 20.1 0.0 0.00078 19.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 gi|16082596|ref|NP_394634.1| - 0.00068 19.1 0.5 0.49 9.8 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|16082596|ref|NP_394634.1| - 0.00088 19.8 0.3 0.0014 19.1 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|16082596|ref|NP_394634.1| - 0.0038 17.5 0.1 0.0099 16.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|16082596|ref|NP_394634.1| - 0.035 14.5 0.0 0.23 11.9 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|16082596|ref|NP_394634.1| - 0.044 13.9 0.0 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|16082596|ref|NP_394634.1| - 0.071 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|16082596|ref|NP_394634.1| - 0.12 11.5 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.6 gi|16082596|ref|NP_394634.1| - 0.14 12.3 0.2 0.71 10.0 0.0 2.2 3 1 0 3 3 3 0 AAA domain NACHT PF05729.12 gi|16082596|ref|NP_394634.1| - 0.15 12.0 0.1 0.34 10.8 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 gi|16082596|ref|NP_394634.1| - 0.16 12.2 0.0 0.4 10.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|16082596|ref|NP_394634.1| - 0.18 11.5 0.0 0.37 10.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Homoserine_dh PF00742.19 gi|16082189|ref|NP_394635.1| - 2.2e-30 105.9 0.2 5.1e-30 104.6 0.2 1.7 1 1 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|16082189|ref|NP_394635.1| - 4.9e-12 46.5 0.0 1.9e-11 44.6 0.0 1.9 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|16082189|ref|NP_394635.1| - 0.098 12.4 0.0 0.24 11.1 0.0 1.7 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AAA_lid_6 PF17866.1 gi|16082189|ref|NP_394635.1| - 0.14 12.4 0.4 0.86 9.8 0.1 2.1 2 0 0 2 2 2 0 AAA lid domain ZYG-11_interact PF05884.12 gi|16082190|ref|NP_394636.1| - 0.55 9.6 6.4 0.71 9.2 6.4 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 Snf7 PF03357.21 gi|16082191|ref|NP_394637.1| - 1.9e-11 43.8 11.3 1.9e-11 43.8 11.3 1.3 1 1 0 1 1 1 1 Snf7 USP8_dimer PF08969.11 gi|16082191|ref|NP_394637.1| - 0.02 15.1 1.7 0.02 15.1 1.7 2.3 2 1 1 3 3 3 0 USP8 dimerisation domain Phage_GPO PF05929.11 gi|16082191|ref|NP_394637.1| - 0.02 14.5 3.7 0.03 13.9 3.7 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF4152 PF13680.6 gi|16082191|ref|NP_394637.1| - 0.034 13.6 0.1 0.043 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) DUF2443 PF10398.9 gi|16082191|ref|NP_394637.1| - 0.071 13.2 2.9 0.29 11.2 0.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2443) SpoIISA_toxin PF14171.6 gi|16082191|ref|NP_394637.1| - 0.11 12.2 3.5 0.16 11.6 3.5 1.2 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system YojJ PF10372.9 gi|16082191|ref|NP_394637.1| - 1.4 9.1 5.8 0.38 10.9 1.7 2.1 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus GFO_IDH_MocA PF01408.22 gi|16082192|ref|NP_394638.1| - 2.6e-16 60.5 0.1 4.1e-16 59.9 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|16082192|ref|NP_394638.1| - 5.2e-09 36.1 0.0 1.1e-08 35.1 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain H-kinase_dim PF02895.14 gi|16082192|ref|NP_394638.1| - 0.059 13.8 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain tRNA-synt_His PF13393.6 gi|16082192|ref|NP_394638.1| - 0.11 11.8 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Histidyl-tRNA synthetase DUF211 PF02680.14 gi|16082193|ref|NP_394639.1| - 2.2e-34 117.5 5.5 2.5e-34 117.3 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 EF1_GNE PF00736.19 gi|16082193|ref|NP_394639.1| - 0.073 13.3 2.4 0.31 11.2 2.1 1.9 1 1 1 2 2 2 0 EF-1 guanine nucleotide exchange domain VIT1 PF01988.19 gi|16082194|ref|NP_394640.1| - 0.0036 17.2 2.2 0.0036 17.2 2.2 1.6 1 1 1 2 2 2 1 VIT family Na_H_Exchanger PF00999.21 gi|16082597|ref|NP_394641.1| - 3.8e-38 131.3 55.4 5e-38 130.9 55.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family WASH-7_C PF14746.6 gi|16082597|ref|NP_394641.1| - 0.2 11.4 0.1 0.49 10.1 0.1 1.6 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal MarR_2 PF12802.7 gi|16082195|ref|NP_394642.1| - 1.6e-07 31.1 0.0 3.1e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|16082195|ref|NP_394642.1| - 4.8e-07 29.7 0.1 9.1e-07 28.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|16082195|ref|NP_394642.1| - 1.2e-06 28.0 0.0 2e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|16082195|ref|NP_394642.1| - 2.3e-06 27.5 0.2 4e-06 26.7 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|16082195|ref|NP_394642.1| - 2.5e-05 24.1 0.2 5.7e-05 23.0 0.2 1.6 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|16082195|ref|NP_394642.1| - 0.00012 21.8 0.2 0.00026 20.8 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|16082195|ref|NP_394642.1| - 0.00024 20.9 0.3 0.00039 20.2 0.3 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|16082195|ref|NP_394642.1| - 0.00025 20.9 0.0 0.00046 20.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4 PF04545.16 gi|16082195|ref|NP_394642.1| - 0.00036 20.0 0.0 0.0011 18.4 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 Rrf2 PF02082.20 gi|16082195|ref|NP_394642.1| - 0.0017 18.7 0.1 0.0031 17.8 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_DeoR PF08220.12 gi|16082195|ref|NP_394642.1| - 0.0028 17.4 0.5 0.0056 16.4 0.5 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|16082195|ref|NP_394642.1| - 0.0033 17.1 0.1 0.013 15.2 0.0 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_10 PF04967.12 gi|16082195|ref|NP_394642.1| - 0.0041 16.9 0.0 0.0076 16.0 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_ECF PF07638.11 gi|16082195|ref|NP_394642.1| - 0.0096 15.8 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 1 ECF sigma factor HTH_40 PF14493.6 gi|16082195|ref|NP_394642.1| - 0.013 16.0 0.1 0.029 14.8 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|16082195|ref|NP_394642.1| - 0.02 14.7 0.0 0.05 13.4 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_47 PF16221.5 gi|16082195|ref|NP_394642.1| - 0.021 14.4 0.1 0.038 13.6 0.1 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_34 PF13601.6 gi|16082195|ref|NP_394642.1| - 0.022 14.9 0.0 0.039 14.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Sulfolobus_pRN PF05584.11 gi|16082195|ref|NP_394642.1| - 0.029 14.4 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein BH4 PF02180.17 gi|16082195|ref|NP_394642.1| - 0.046 13.5 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Bcl-2 homology region 4 LexA_DNA_bind PF01726.16 gi|16082195|ref|NP_394642.1| - 0.059 13.2 0.2 0.11 12.3 0.2 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HTH_12 PF08461.10 gi|16082195|ref|NP_394642.1| - 0.062 13.3 0.8 0.16 11.9 0.8 1.7 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_38 PF13936.6 gi|16082195|ref|NP_394642.1| - 0.081 12.7 0.1 0.31 10.8 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain GntR PF00392.21 gi|16082195|ref|NP_394642.1| - 0.093 12.4 0.2 0.17 11.6 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family B-block_TFIIIC PF04182.12 gi|16082195|ref|NP_394642.1| - 0.12 12.6 0.0 0.23 11.6 0.0 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC TnsD PF15978.5 gi|16082195|ref|NP_394642.1| - 0.15 11.0 0.0 0.23 10.4 0.0 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_35 PF13693.6 gi|16082195|ref|NP_394642.1| - 0.17 12.0 0.2 0.31 11.1 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|16082195|ref|NP_394642.1| - 0.17 12.0 0.3 0.47 10.6 0.3 1.7 2 0 0 2 2 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MFS_1 PF07690.16 gi|16082196|ref|NP_394643.1| - 1.3e-14 53.9 33.9 1.3e-14 53.9 33.9 1.4 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_1 PF07690.16 gi|16082197|ref|NP_394644.1| - 3.1e-13 49.4 41.6 3.1e-13 49.4 41.6 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|16082197|ref|NP_394644.1| - 0.0052 15.7 21.6 0.031 13.2 21.6 1.9 1 1 0 1 1 1 1 MFS_1 like family DUF1077 PF06417.12 gi|16082197|ref|NP_394644.1| - 2.1 8.4 6.0 0.36 10.9 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) Aminotran_1_2 PF00155.21 gi|16082198|ref|NP_394645.1| - 3.9e-65 220.4 0.0 4.5e-65 220.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|16082198|ref|NP_394645.1| - 0.0007 18.2 0.0 0.0011 17.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|16082198|ref|NP_394645.1| - 0.00095 18.5 0.1 0.0015 17.9 0.1 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|16082198|ref|NP_394645.1| - 0.011 14.8 0.1 0.017 14.1 0.1 1.3 1 0 0 1 1 1 0 Aminotransferase class-V OKR_DC_1 PF01276.20 gi|16082198|ref|NP_394645.1| - 0.015 14.0 0.0 0.051 12.3 0.0 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain HTH_ParB PF17762.1 gi|16082198|ref|NP_394645.1| - 0.036 13.9 0.1 0.09 12.6 0.1 1.7 1 0 0 1 1 1 0 HTH domain found in ParB protein Ribosomal_S2 PF00318.20 gi|16082199|ref|NP_394646.1| - 9.9e-29 100.1 0.9 4e-14 52.4 0.6 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 tRNA_int_endo PF01974.17 gi|16082200|ref|NP_394647.1| - 7.1e-22 77.3 2.9 5.4e-19 68.1 0.5 2.4 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|16082200|ref|NP_394647.1| - 0.0015 18.2 0.0 0.0035 17.0 0.0 1.6 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain NFACT-R_1 PF05670.13 gi|16082200|ref|NP_394647.1| - 0.1 13.3 0.0 2.5 8.8 0.0 2.3 2 0 0 2 2 2 0 NFACT protein RNA binding domain Ras PF00071.22 gi|16082201|ref|NP_394648.1| - 5e-12 45.7 0.2 1.2e-11 44.5 0.2 1.6 1 1 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 gi|16082201|ref|NP_394648.1| - 2.1e-05 24.5 0.1 0.0031 17.4 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 gi|16082201|ref|NP_394648.1| - 0.0018 18.5 0.1 0.029 14.6 0.1 2.1 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FtsK_SpoIIIE PF01580.18 gi|16082201|ref|NP_394648.1| - 0.029 13.7 0.1 0.12 11.7 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_29 PF13555.6 gi|16082201|ref|NP_394648.1| - 0.041 13.6 0.0 0.075 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1_Xtn PF16897.5 gi|16082201|ref|NP_394648.1| - 0.051 13.6 0.0 0.082 12.9 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Gtr1_RagA PF04670.12 gi|16082201|ref|NP_394648.1| - 0.067 12.5 0.8 0.53 9.6 0.8 2.0 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region ABC_tran PF00005.27 gi|16082201|ref|NP_394648.1| - 0.071 13.6 0.0 0.089 13.3 0.0 1.3 1 0 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.23 gi|16082201|ref|NP_394648.1| - 0.075 13.1 0.1 0.2 11.8 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|16082201|ref|NP_394648.1| - 0.078 12.7 0.7 0.12 12.0 0.7 1.7 1 1 0 1 1 1 0 AAA domain Aminotran_1_2 PF00155.21 gi|16082202|ref|NP_394649.1| - 7.4e-42 143.8 0.0 8.7e-42 143.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|16082202|ref|NP_394649.1| - 4.3e-10 38.9 0.0 7e-09 35.0 0.0 2.1 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 gi|16082202|ref|NP_394649.1| - 0.00043 19.7 0.0 0.00068 19.0 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|16082202|ref|NP_394649.1| - 0.0069 15.7 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF4525 PF15027.6 gi|16082202|ref|NP_394649.1| - 0.024 14.3 0.1 7.5 6.3 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4525) CdiA_C PF18451.1 gi|16082202|ref|NP_394649.1| - 0.12 12.7 0.1 0.52 10.6 0.0 2.1 2 0 0 2 2 2 0 Contact-dependent growth inhibition CdiA C-terminal domain NTPase_I-T PF01931.18 gi|16082203|ref|NP_394650.1| - 6.9e-37 126.7 0.0 9.3e-37 126.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF84 CTP_transf_like PF01467.26 gi|16082203|ref|NP_394650.1| - 1.3e-12 48.2 0.0 2.5e-12 47.2 0.0 1.5 1 0 0 1 1 1 1 Cytidylyltransferase-like Na_Ca_ex PF01699.24 gi|16082204|ref|NP_394651.1| - 3.2e-17 62.9 40.6 2.8e-11 43.6 18.8 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein AdoMet_dc PF02675.15 gi|16082205|ref|NP_394652.1| - 7e-32 109.8 0.0 8.3e-32 109.6 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase Lipase_3 PF01764.25 gi|16082205|ref|NP_394652.1| - 0.14 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) HTH_24 PF13412.6 gi|16082206|ref|NP_394653.1| - 5.2e-05 22.7 0.0 0.00013 21.4 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|16082206|ref|NP_394653.1| - 6.7e-05 23.3 0.0 0.00017 22.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|16082206|ref|NP_394653.1| - 0.00012 21.9 0.0 0.00052 19.8 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|16082206|ref|NP_394653.1| - 0.00016 21.6 0.0 0.00042 20.3 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|16082206|ref|NP_394653.1| - 0.0019 18.1 0.0 0.0066 16.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|16082206|ref|NP_394653.1| - 0.021 14.6 0.1 0.043 13.7 0.1 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_Crp_2 PF13545.6 gi|16082206|ref|NP_394653.1| - 0.07 13.1 0.0 0.21 11.6 0.0 1.8 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|16082206|ref|NP_394653.1| - 0.087 12.8 0.1 0.18 11.8 0.1 1.6 1 0 0 1 1 1 0 HTH domain UbiA PF01040.18 gi|16082207|ref|NP_394654.1| - 1.4e-39 135.9 21.8 1.9e-39 135.5 21.8 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family UbiD PF01977.16 gi|16082208|ref|NP_394655.1| - 1.4e-147 491.8 0.1 1.7e-147 491.6 0.1 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Galactosyl_T PF01762.21 gi|16082208|ref|NP_394655.1| - 0.0012 18.8 0.2 0.002 18.0 0.2 1.4 1 0 0 1 1 1 1 Galactosyltransferase GATase_3 PF07685.14 gi|16082209|ref|NP_394656.1| - 8.2e-35 120.2 0.0 1.2e-34 119.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|16082209|ref|NP_394656.1| - 1e-13 51.4 0.0 1.9e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|16082209|ref|NP_394656.1| - 3.9e-12 46.4 0.1 7.3e-07 29.2 0.0 2.8 3 0 0 3 3 3 2 AAA domain PAC2 PF09754.9 gi|16082210|ref|NP_394657.1| - 6.4e-46 157.0 0.0 7.3e-46 156.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family PP-binding PF00550.25 gi|16082210|ref|NP_394657.1| - 0.014 15.7 0.0 0.032 14.6 0.0 1.6 1 0 0 1 1 1 0 Phosphopantetheine attachment site Ribosomal_L7Ae PF01248.26 gi|16082210|ref|NP_394657.1| - 0.065 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Nop10p PF04135.12 gi|16082211|ref|NP_394658.1| - 9.7e-20 70.4 3.7 1.2e-19 70.1 3.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|16082211|ref|NP_394658.1| - 6.8e-05 22.4 1.3 9e-05 22.0 1.3 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|16082211|ref|NP_394658.1| - 0.0015 16.5 0.1 0.0015 16.5 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 zf-C4_Topoisom PF01396.19 gi|16082211|ref|NP_394658.1| - 0.0043 16.8 2.0 0.19 11.5 0.4 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zf-TFIIB PF13453.6 gi|16082211|ref|NP_394658.1| - 0.0047 16.2 2.0 1.2 8.6 0.1 2.3 2 0 0 2 2 2 2 Transcription factor zinc-finger VWA_N2 PF16164.5 gi|16082211|ref|NP_394658.1| - 0.0078 16.3 0.1 0.0087 16.2 0.1 1.1 1 0 0 1 1 1 1 VWA N-terminal NRDD PF13597.6 gi|16082211|ref|NP_394658.1| - 0.0095 14.8 0.5 0.011 14.5 0.5 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase TF_Zn_Ribbon PF08271.12 gi|16082211|ref|NP_394658.1| - 0.011 15.3 4.9 0.13 11.8 0.4 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding zf-tcix PF14952.6 gi|16082211|ref|NP_394658.1| - 0.023 14.3 5.6 1.1 8.9 0.3 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DNA_ligase_ZBD PF03119.16 gi|16082211|ref|NP_394658.1| - 0.036 14.1 1.4 1.2 9.3 0.1 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ribbon_3 PF13248.6 gi|16082211|ref|NP_394658.1| - 0.041 13.3 3.5 0.28 10.7 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16082211|ref|NP_394658.1| - 0.044 13.9 5.6 0.78 9.9 0.5 2.3 1 1 1 2 2 2 0 Zinc ribbon domain TackOD1 PF18551.1 gi|16082211|ref|NP_394658.1| - 0.062 13.0 1.1 0.073 12.7 1.1 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 HypA PF01155.19 gi|16082211|ref|NP_394658.1| - 0.08 13.0 0.4 0.09 12.8 0.4 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ACC PF17848.1 gi|16082211|ref|NP_394658.1| - 0.086 12.9 4.0 2.7 8.1 0.8 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-RRN7 PF11781.8 gi|16082211|ref|NP_394658.1| - 0.091 12.5 3.0 0.35 10.6 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TFIIS_C PF01096.18 gi|16082211|ref|NP_394658.1| - 0.11 12.4 2.9 1.7 8.6 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 gi|16082211|ref|NP_394658.1| - 0.21 11.6 6.5 0.73 9.8 0.2 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|16082211|ref|NP_394658.1| - 0.22 11.3 3.8 3.4 7.5 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain PhnA_Zn_Ribbon PF08274.12 gi|16082211|ref|NP_394658.1| - 0.25 11.3 5.9 0.33 10.9 0.5 2.2 1 1 1 2 2 2 0 PhnA Zinc-Ribbon Zn_Tnp_IS1 PF03811.13 gi|16082211|ref|NP_394658.1| - 0.37 10.6 7.0 1.6 8.5 0.8 2.4 2 1 1 3 3 2 0 InsA N-terminal domain CpXC PF14353.6 gi|16082211|ref|NP_394658.1| - 0.59 10.2 2.9 1.1 9.3 0.1 2.0 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_2 PF13240.6 gi|16082211|ref|NP_394658.1| - 0.62 9.9 7.6 1.5 8.6 1.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain VP_N-CPKC PF11475.8 gi|16082211|ref|NP_394658.1| - 1.2 9.1 6.3 1.1 9.2 2.7 2.1 1 1 1 2 2 2 0 Virion protein N terminal domain Mu-like_Com PF10122.9 gi|16082211|ref|NP_394658.1| - 2 7.9 8.1 2.7 7.5 0.4 2.2 1 1 1 2 2 2 0 Mu-like prophage protein Com EIF_2_alpha PF07541.12 gi|16082212|ref|NP_394659.1| - 1.3e-19 70.4 0.4 7.6e-18 64.7 0.0 2.9 2 2 1 3 3 3 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|16082212|ref|NP_394659.1| - 3.4e-07 30.5 0.6 3.4e-07 30.5 0.6 2.5 2 1 0 2 2 2 1 S1 RNA binding domain HNOB PF07700.15 gi|16082212|ref|NP_394659.1| - 0.026 14.5 0.0 0.049 13.6 0.0 1.5 1 0 0 1 1 1 0 Haem-NO-binding DUF2007 PF09413.10 gi|16082212|ref|NP_394659.1| - 0.057 13.6 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein PriA_C PF18074.1 gi|16082212|ref|NP_394659.1| - 0.07 14.0 0.5 0.27 12.1 0.1 2.1 2 0 0 2 2 2 0 Primosomal protein N C-terminal domain C1-set PF07654.15 gi|16082212|ref|NP_394659.1| - 0.079 13.4 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Immunoglobulin C1-set domain CSD2 PF17876.1 gi|16082212|ref|NP_394659.1| - 1.3 9.2 5.5 5.9 7.1 0.0 3.4 3 0 0 3 3 3 0 Cold shock domain Ribosomal_S27e PF01667.17 gi|16082213|ref|NP_394660.1| - 7.5e-18 64.0 2.0 8.6e-18 63.8 2.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 zf-ribbon_3 PF13248.6 gi|16082213|ref|NP_394660.1| - 0.0026 17.1 2.6 0.12 11.9 0.2 2.2 2 0 0 2 2 2 1 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|16082213|ref|NP_394660.1| - 0.005 16.9 0.5 0.0081 16.3 0.5 1.3 1 0 0 1 1 1 1 Zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|16082213|ref|NP_394660.1| - 0.0067 16.4 1.9 0.021 14.8 2.0 1.7 1 1 0 1 1 1 1 Zinc-ribbon zf-BED PF02892.15 gi|16082213|ref|NP_394660.1| - 0.0089 16.0 0.8 0.33 11.0 0.0 2.2 2 0 0 2 2 2 1 BED zinc finger zinc_ribbon_4 PF13717.6 gi|16082213|ref|NP_394660.1| - 0.023 14.6 2.2 0.42 10.6 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|16082213|ref|NP_394660.1| - 0.028 13.9 0.7 0.046 13.2 0.7 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding HypA PF01155.19 gi|16082213|ref|NP_394660.1| - 0.048 13.7 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|16082213|ref|NP_394660.1| - 0.059 13.3 0.2 0.073 13.0 0.2 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-Sec23_Sec24 PF04810.15 gi|16082213|ref|NP_394660.1| - 0.09 12.8 1.9 0.16 12.1 1.9 1.4 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger zf-trcl PF13451.6 gi|16082213|ref|NP_394660.1| - 0.1 12.5 1.3 1.3 8.9 0.1 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain zf-C2H2 PF00096.26 gi|16082213|ref|NP_394660.1| - 0.14 12.7 0.8 10 6.8 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf_UBZ PF18439.1 gi|16082213|ref|NP_394660.1| - 0.24 11.0 0.5 3.1 7.5 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger CpXC PF14353.6 gi|16082213|ref|NP_394660.1| - 0.27 11.3 1.2 4.7 7.3 0.1 2.0 1 1 1 2 2 2 0 CpXC protein ZZ PF00569.17 gi|16082213|ref|NP_394660.1| - 0.76 9.6 4.3 1.5 8.7 0.4 2.1 1 1 1 2 2 2 0 Zinc finger, ZZ type Desulfoferrod_N PF06397.12 gi|16082213|ref|NP_394660.1| - 2.1 8.0 10.0 2.4 7.9 1.0 3.0 2 1 1 3 3 3 0 Desulfoferrodoxin, N-terminal domain Ribosomal_L44 PF00935.19 gi|16082214|ref|NP_394661.1| - 1e-30 106.0 2.4 1.4e-30 105.6 2.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|16082214|ref|NP_394661.1| - 0.00037 20.9 2.1 0.012 16.0 1.1 2.4 2 0 0 2 2 2 1 Ribosomal protein L33 DUF4451 PF14616.6 gi|16082214|ref|NP_394661.1| - 0.013 15.7 0.6 0.02 15.1 0.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4451) zf-U1 PF06220.12 gi|16082214|ref|NP_394661.1| - 0.021 14.6 1.1 0.045 13.5 0.6 1.7 2 0 0 2 2 2 0 U1 zinc finger Zn_Tnp_IS1595 PF12760.7 gi|16082214|ref|NP_394661.1| - 0.071 13.1 2.1 0.95 9.5 0.5 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf_UBZ PF18439.1 gi|16082214|ref|NP_394661.1| - 0.08 12.5 1.4 1.4 8.5 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger RICTOR_phospho PF14665.6 gi|16082214|ref|NP_394661.1| - 0.082 13.2 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site zf-ribbon_3 PF13248.6 gi|16082214|ref|NP_394661.1| - 0.16 11.4 2.2 0.17 11.3 0.2 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Rsm1 PF08600.10 gi|16082214|ref|NP_394661.1| - 0.19 11.9 0.4 1.6 9.0 0.1 2.0 2 0 0 2 2 2 0 Rsm1-like DUF1805 PF08827.11 gi|16082215|ref|NP_394662.1| - 2.1e-22 79.2 0.6 2.7e-22 78.9 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) Inj_translocase PF16928.5 gi|16082215|ref|NP_394662.1| - 0.045 13.2 0.0 0.051 13.0 0.0 1.1 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome CN_hydrolase PF00795.22 gi|16082217|ref|NP_394664.1| - 1.3e-52 178.8 0.0 1.4e-52 178.6 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Trehalose_PPase PF02358.16 gi|16082598|ref|NP_394665.1| - 4.5e-22 78.3 0.0 5.4e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 gi|16082598|ref|NP_394665.1| - 2.8e-07 30.5 0.0 2.9e-05 23.9 0.0 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Glyco_transf_20 PF00982.21 gi|16082218|ref|NP_394666.1| - 1.4e-104 350.5 0.2 7.7e-103 344.7 0.2 2.0 1 1 0 1 1 1 1 Glycosyltransferase family 20 Glyco_transf_5 PF08323.11 gi|16082218|ref|NP_394666.1| - 0.12 12.1 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 Starch synthase catalytic domain tRNA-synt_1b PF00579.25 gi|16082219|ref|NP_394667.1| - 1e-34 120.2 0.0 2.1e-20 73.2 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) IF-2B PF01008.17 gi|16082220|ref|NP_394668.1| - 2.9e-71 240.0 0.0 1.1e-70 238.1 0.0 1.8 1 1 0 1 1 1 1 Initiation factor 2 subunit family Transp_cyt_pur PF02133.15 gi|16082221|ref|NP_394669.1| - 6.4e-15 54.9 36.6 1.3e-14 53.8 36.6 1.4 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin TK PF00265.18 gi|16082222|ref|NP_394670.1| - 2.4e-41 141.5 0.0 2.7e-41 141.3 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase Nop10p PF04135.12 gi|16082222|ref|NP_394670.1| - 0.067 13.3 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family TrwB_AAD_bind PF10412.9 gi|16082224|ref|NP_394672.1| - 9.2e-14 51.1 0.1 5.9e-08 32.0 0.0 2.1 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 gi|16082224|ref|NP_394672.1| - 3.2e-08 34.0 0.1 1.8e-07 31.5 0.0 2.2 2 0 0 2 2 2 1 Helicase HerA, central domain TraG-D_C PF12696.7 gi|16082224|ref|NP_394672.1| - 4.3e-06 26.7 0.1 9.8e-06 25.6 0.1 1.6 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG AAA_22 PF13401.6 gi|16082224|ref|NP_394672.1| - 0.00015 22.0 0.0 0.14 12.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|16082224|ref|NP_394672.1| - 0.0022 18.5 0.0 0.0051 17.3 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_10 PF12846.7 gi|16082224|ref|NP_394672.1| - 0.0038 16.2 0.0 0.0074 15.2 0.0 1.4 1 0 0 1 1 1 1 AAA-like domain DUF815 PF05673.13 gi|16082224|ref|NP_394672.1| - 0.02 14.0 0.1 0.95 8.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_30 PF13604.6 gi|16082224|ref|NP_394672.1| - 0.024 14.4 0.0 6.1 6.5 0.0 2.8 3 0 0 3 3 3 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|16082224|ref|NP_394672.1| - 0.026 13.9 0.0 0.05 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family TMEM144 PF07857.12 gi|16082224|ref|NP_394672.1| - 0.047 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters Helicase_RecD PF05127.14 gi|16082224|ref|NP_394672.1| - 0.12 12.2 0.0 11 5.8 0.0 2.3 2 0 0 2 2 2 0 Helicase AAA_14 PF13173.6 gi|16082224|ref|NP_394672.1| - 0.15 12.1 2.6 1.2 9.2 0.0 3.4 4 1 0 4 4 4 0 AAA domain Replic_Relax PF13814.6 gi|16082224|ref|NP_394672.1| - 0.2 11.7 0.0 0.47 10.5 0.0 1.6 1 0 0 1 1 1 0 Replication-relaxation MazE_antitoxin PF04014.18 gi|16082225|ref|NP_394673.1| - 0.00039 20.3 0.0 0.00047 20.0 0.0 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|16082225|ref|NP_394673.1| - 0.005 17.2 0.0 0.0054 17.2 0.0 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin Imm27 PF15590.6 gi|16082225|ref|NP_394673.1| - 0.015 15.1 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 27 Glucodextran_C PF09985.9 gi|16082225|ref|NP_394673.1| - 0.14 11.6 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 C-terminal binding-module, SLH-like, of glucodextranase Arc_trans_TRASH PF08394.10 gi|16082226|ref|NP_394674.1| - 7.2e-20 71.0 6.9 1.2e-19 70.4 6.9 1.4 1 0 0 1 1 1 1 Archaeal TRASH domain HTH_24 PF13412.6 gi|16082226|ref|NP_394674.1| - 1.5e-11 43.7 1.8 2.2e-11 43.1 1.8 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|16082226|ref|NP_394674.1| - 4.3e-07 29.5 0.4 8.1e-07 28.7 0.1 1.6 2 0 0 2 2 1 1 Homeodomain-like domain MarR_2 PF12802.7 gi|16082226|ref|NP_394674.1| - 1.7e-06 27.8 0.0 3e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|16082226|ref|NP_394674.1| - 3.7e-06 26.7 0.1 6.6e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_AsnC-type PF13404.6 gi|16082226|ref|NP_394674.1| - 4.3e-06 26.5 0.2 6.7e-06 25.8 0.2 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|16082226|ref|NP_394674.1| - 6e-06 26.1 0.1 1e-05 25.3 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|16082226|ref|NP_394674.1| - 1e-05 25.4 0.2 2.3e-05 24.3 0.1 1.6 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|16082226|ref|NP_394674.1| - 2.5e-05 24.1 0.5 4.3e-05 23.4 0.5 1.4 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.16 gi|16082226|ref|NP_394674.1| - 3.2e-05 23.3 0.3 6e-05 22.5 0.3 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Rrf2 PF02082.20 gi|16082226|ref|NP_394674.1| - 3.7e-05 24.0 0.0 5.9e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 gi|16082226|ref|NP_394674.1| - 0.00032 20.5 0.8 0.00055 19.7 0.1 1.7 2 0 0 2 2 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|16082226|ref|NP_394674.1| - 0.00034 21.1 0.1 0.00077 19.9 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|16082226|ref|NP_394674.1| - 0.00048 20.0 0.4 0.0026 17.7 0.1 2.4 3 1 0 3 3 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|16082226|ref|NP_394674.1| - 0.00084 19.1 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain GerE PF00196.19 gi|16082226|ref|NP_394674.1| - 0.00086 18.8 0.2 0.0016 18.0 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family GntR PF00392.21 gi|16082226|ref|NP_394674.1| - 0.0011 18.6 0.1 0.0018 17.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_28 PF13518.6 gi|16082226|ref|NP_394674.1| - 0.0014 18.7 0.1 0.0028 17.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.11 gi|16082226|ref|NP_394674.1| - 0.0036 17.3 0.1 0.007 16.4 0.1 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_5 PF01022.20 gi|16082226|ref|NP_394674.1| - 0.0051 16.6 0.1 0.015 15.1 0.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_41 PF14502.6 gi|16082226|ref|NP_394674.1| - 0.0057 16.3 0.3 0.017 14.8 0.1 1.9 3 0 0 3 3 1 1 Helix-turn-helix domain RPA_C PF08784.11 gi|16082226|ref|NP_394674.1| - 0.0083 16.8 0.0 0.013 16.1 0.0 1.3 1 0 0 1 1 1 1 Replication protein A C terminal UPF0122 PF04297.14 gi|16082226|ref|NP_394674.1| - 0.0088 16.3 0.0 0.023 14.9 0.0 1.6 2 0 0 2 2 1 1 Putative helix-turn-helix protein, YlxM / p13 like Sigma70_r4_2 PF08281.12 gi|16082226|ref|NP_394674.1| - 0.012 15.3 0.2 0.027 14.1 0.2 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 Mga PF05043.13 gi|16082226|ref|NP_394674.1| - 0.016 15.8 0.0 0.026 15.1 0.0 1.3 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_10 PF04967.12 gi|16082226|ref|NP_394674.1| - 0.016 15.0 0.1 0.029 14.2 0.1 1.5 1 1 0 1 1 1 0 HTH DNA binding domain HTH_20 PF12840.7 gi|16082226|ref|NP_394674.1| - 0.021 14.9 0.0 0.035 14.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain zf-ribbon_3 PF13248.6 gi|16082226|ref|NP_394674.1| - 0.026 13.9 4.1 1.3 8.5 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain YjcQ PF09639.10 gi|16082226|ref|NP_394674.1| - 0.039 14.2 0.1 0.057 13.6 0.1 1.3 1 0 0 1 1 1 0 YjcQ protein Fe_dep_repress PF01325.19 gi|16082226|ref|NP_394674.1| - 0.045 13.9 0.1 0.083 13.1 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DZR PF12773.7 gi|16082226|ref|NP_394674.1| - 0.051 13.6 1.2 0.11 12.6 1.2 1.5 1 1 0 1 1 1 0 Double zinc ribbon TnsD PF15978.5 gi|16082226|ref|NP_394674.1| - 0.06 12.3 0.1 0.084 11.8 0.1 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_29 PF13551.6 gi|16082226|ref|NP_394674.1| - 0.063 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Penicillinase_R PF03965.16 gi|16082226|ref|NP_394674.1| - 0.064 13.6 0.1 0.098 13.0 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor HTH_CodY PF08222.11 gi|16082226|ref|NP_394674.1| - 0.071 12.7 0.2 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_DeoR PF08220.12 gi|16082226|ref|NP_394674.1| - 0.071 12.9 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_46 PF15977.5 gi|16082226|ref|NP_394674.1| - 0.088 12.8 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding DUF3268 PF11672.8 gi|16082226|ref|NP_394674.1| - 0.11 12.8 1.8 0.2 12.0 1.8 1.4 1 0 0 1 1 1 0 zinc-finger-containing domain DDRGK PF09756.9 gi|16082226|ref|NP_394674.1| - 0.12 12.0 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 DDRGK domain HTH_40 PF14493.6 gi|16082226|ref|NP_394674.1| - 0.12 12.8 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|16082226|ref|NP_394674.1| - 0.13 12.4 0.2 0.25 11.4 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix HTH_6 PF01418.17 gi|16082226|ref|NP_394674.1| - 0.13 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family OrfB_Zn_ribbon PF07282.11 gi|16082226|ref|NP_394674.1| - 0.14 12.1 1.1 0.4 10.7 1.1 1.8 1 1 0 1 1 1 0 Putative transposase DNA-binding domain FeoC PF09012.10 gi|16082226|ref|NP_394674.1| - 0.15 12.2 3.2 0.72 10.0 0.0 2.7 2 1 1 3 3 3 0 FeoC like transcriptional regulator DUF973 PF06157.11 gi|16082659|ref|NP_394675.1| - 0.021 13.9 2.7 0.025 13.6 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF202 PF02656.15 gi|16082659|ref|NP_394675.1| - 0.058 13.8 3.7 2.5 8.6 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF202) UPF0220 PF05255.11 gi|16082659|ref|NP_394675.1| - 0.082 12.5 0.1 0.098 12.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) Pox_A14 PF05767.12 gi|16082659|ref|NP_394675.1| - 0.25 11.5 2.0 0.44 10.7 2.0 1.5 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF2116 PF09889.9 gi|16082659|ref|NP_394675.1| - 0.32 11.0 0.1 0.32 11.0 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) SdpI PF13630.6 gi|16082659|ref|NP_394675.1| - 0.58 10.3 3.6 1.2 9.3 3.6 1.6 1 1 0 1 1 1 0 SdpI/YhfL protein family MscS_TM PF12794.7 gi|16082227|ref|NP_394676.1| - 0.024 13.5 3.4 0.025 13.4 3.4 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF599 PF04654.12 gi|16082227|ref|NP_394676.1| - 0.12 11.8 4.2 0.04 13.4 1.1 1.6 1 1 1 2 2 2 0 Protein of unknown function, DUF599 PgaD PF13994.6 gi|16082227|ref|NP_394676.1| - 0.28 11.2 4.8 0.15 12.1 1.6 1.9 1 1 1 2 2 2 0 PgaD-like protein DUF373 PF04123.13 gi|16082227|ref|NP_394676.1| - 0.67 9.3 9.0 0.75 9.2 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF2208 PF09973.9 gi|16082227|ref|NP_394676.1| - 2.9 7.4 13.4 0.78 9.3 7.7 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2208) DUF131 PF01998.17 gi|16082227|ref|NP_394676.1| - 7.9 6.2 9.5 0.65 9.7 0.3 2.8 3 0 0 3 3 3 0 Protein of unknown function DUF131 Lung_7-TM_R PF06814.13 gi|16082228|ref|NP_394677.1| - 0.005 16.1 0.7 0.0055 16.0 0.7 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor DUF981 PF06168.11 gi|16082228|ref|NP_394677.1| - 0.032 14.2 2.5 0.036 14.0 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF981) Cytochrom_B_N_2 PF13631.6 gi|16082229|ref|NP_394678.1| - 2.1e-47 161.2 15.8 2.1e-47 161.2 15.8 2.6 3 0 0 3 3 3 2 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|16082229|ref|NP_394678.1| - 4.9e-15 55.8 21.2 4.9e-15 55.8 21.2 2.1 3 0 0 3 3 3 1 Cytochrome b/b6/petB Cytochrom_B_C PF00032.17 gi|16082229|ref|NP_394678.1| - 0.00074 19.8 2.6 0.00074 19.8 2.6 3.3 3 2 0 3 3 3 1 Cytochrome b(C-terminal)/b6/petD PalH PF08733.10 gi|16082229|ref|NP_394678.1| - 3.6 6.5 21.9 0.29 10.1 9.7 2.4 1 1 1 2 2 2 0 PalH/RIM21 Rieske PF00355.26 gi|16082230|ref|NP_394679.1| - 1.3e-05 25.0 0.0 2.6e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain TAT_signal PF10518.9 gi|16082230|ref|NP_394679.1| - 0.093 12.6 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence MttA_Hcf106 PF02416.16 gi|16082660|ref|NP_394680.1| - 3.6e-13 48.6 0.3 5.2e-12 44.9 0.1 2.0 2 0 0 2 2 2 1 mttA/Hcf106 family TPP_enzyme_C PF02775.21 gi|16082660|ref|NP_394680.1| - 0.12 12.1 0.2 0.26 11.1 0.1 1.6 1 1 1 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TatC PF00902.18 gi|16082231|ref|NP_394681.1| - 4.6e-43 147.5 25.0 5.8e-43 147.1 25.0 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) PDR_assoc PF08370.11 gi|16082231|ref|NP_394681.1| - 1.3 8.8 13.4 1.6 8.6 3.6 2.8 2 0 0 2 2 2 0 Plant PDR ABC transporter associated MmgE_PrpD PF03972.14 gi|16082232|ref|NP_394682.1| - 3.6e-106 355.3 0.0 4.4e-106 355.1 0.0 1.0 1 0 0 1 1 1 1 MmgE/PrpD family PEP_mutase PF13714.6 gi|16082233|ref|NP_394683.1| - 8.2e-55 185.8 1.1 9.6e-55 185.6 1.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|16082233|ref|NP_394683.1| - 1e-16 60.6 0.6 1.3e-16 60.2 0.6 1.1 1 0 0 1 1 1 1 Isocitrate lyase family ComA PF02679.15 gi|16082233|ref|NP_394683.1| - 0.0045 16.5 1.3 0.042 13.3 0.3 2.1 1 1 1 2 2 2 1 (2R)-phospho-3-sulfolactate synthase (ComA) Cytochrom_B_N_2 PF13631.6 gi|16082234|ref|NP_394684.1| - 3.9e-57 192.9 2.7 3.9e-57 192.9 2.7 3.8 4 0 0 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|16082234|ref|NP_394684.1| - 2.1e-26 92.9 8.3 2.1e-26 92.9 8.3 2.5 2 1 0 2 2 2 1 Cytochrome b/b6/petB DUF4405 PF14358.6 gi|16082234|ref|NP_394684.1| - 0.0012 19.3 2.7 0.0012 19.3 2.7 5.1 3 2 1 4 4 4 1 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.20 gi|16082234|ref|NP_394684.1| - 0.88 9.1 29.3 0.036 13.7 2.0 4.1 1 1 0 3 3 3 0 Prokaryotic cytochrome b561 PDR_assoc PF08370.11 gi|16082234|ref|NP_394684.1| - 8.1 6.3 13.3 5.9 6.7 0.1 3.7 4 0 0 4 4 4 0 Plant PDR ABC transporter associated Rieske PF00355.26 gi|16082599|ref|NP_394685.1| - 1.2e-08 34.8 0.1 2.1e-08 34.0 0.1 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain YceI PF04264.13 gi|16082235|ref|NP_394686.1| - 8.7e-25 88.0 0.0 1e-24 87.7 0.0 1.1 1 0 0 1 1 1 1 YceI-like domain HTH_10 PF04967.12 gi|16082236|ref|NP_394687.1| - 6.5e-16 57.9 0.0 1.3e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|16082236|ref|NP_394687.1| - 3.2e-06 26.6 0.1 5.4e-05 22.6 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 Macro_2 PF14519.6 gi|16082236|ref|NP_394687.1| - 0.027 13.8 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Macro-like domain HTH_Crp_2 PF13545.6 gi|16082236|ref|NP_394687.1| - 0.036 14.1 0.0 2.8 8.0 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|16082236|ref|NP_394687.1| - 0.037 13.6 0.0 0.74 9.4 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 gi|16082236|ref|NP_394687.1| - 0.073 12.9 0.7 1.3 8.9 0.0 3.0 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_37 PF13744.6 gi|16082236|ref|NP_394687.1| - 0.12 12.4 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_4 PF13613.6 gi|16082236|ref|NP_394687.1| - 0.17 11.7 0.0 0.38 10.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease ECH_1 PF00378.20 gi|16082237|ref|NP_394688.1| - 3.5e-10 39.6 0.1 6e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Fer4_6 PF12837.7 gi|16082238|ref|NP_394689.1| - 1.8e-06 27.8 12.1 0.0021 18.0 0.1 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16082238|ref|NP_394689.1| - 3.9e-06 27.3 10.6 0.0015 19.0 10.5 3.0 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082238|ref|NP_394689.1| - 5.9e-05 23.1 13.6 0.0011 19.0 8.7 2.9 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082238|ref|NP_394689.1| - 6.3e-05 23.0 9.3 0.0042 17.2 7.7 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16082238|ref|NP_394689.1| - 0.00024 21.1 4.4 0.00024 21.1 4.4 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|16082238|ref|NP_394689.1| - 0.00039 20.1 14.4 0.0036 17.1 0.1 3.9 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_11 PF13247.6 gi|16082238|ref|NP_394689.1| - 0.00055 20.0 3.7 0.001 19.2 1.3 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16082238|ref|NP_394689.1| - 0.00063 19.7 13.7 0.016 15.3 0.1 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_5 PF12801.7 gi|16082238|ref|NP_394689.1| - 0.014 15.3 0.3 0.014 15.3 0.3 3.5 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16082238|ref|NP_394689.1| - 0.023 15.6 3.4 4.3 8.3 0.0 3.1 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|16082238|ref|NP_394689.1| - 0.18 12.4 0.4 0.18 12.4 0.4 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|16082238|ref|NP_394689.1| - 0.5 10.8 9.0 1.4 9.4 0.1 3.1 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|16082238|ref|NP_394689.1| - 0.71 10.5 11.4 90 3.7 0.0 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16082238|ref|NP_394689.1| - 2.9 9.1 18.9 3.5 8.8 1.1 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain GTP_EFTU_D2 PF03144.25 gi|16082242|ref|NP_394693.1| - 2.2e-10 40.7 0.9 4.6e-10 39.7 0.2 1.9 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 gi|16082242|ref|NP_394693.1| - 0.0055 16.6 0.6 0.011 15.6 0.2 1.6 2 0 0 2 2 2 1 Elongation factor Tu domain 4 DUF1940 PF09155.10 gi|16082243|ref|NP_394694.1| - 6.2e-67 224.2 0.2 6.9e-67 224.0 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1940) FixP_N PF14715.6 gi|16082243|ref|NP_394694.1| - 0.032 14.0 0.1 0.058 13.1 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF2262 PF10020.9 gi|16082243|ref|NP_394694.1| - 0.051 14.0 4.2 0.19 12.1 4.3 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) AAA_28 PF13521.6 gi|16082243|ref|NP_394694.1| - 0.11 12.7 0.2 0.28 11.4 0.1 1.6 1 1 1 2 2 2 0 AAA domain NAD_binding_10 PF13460.6 gi|16082244|ref|NP_394695.1| - 9.7e-10 38.6 0.1 2.1e-09 37.5 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding 3Beta_HSD PF01073.19 gi|16082244|ref|NP_394695.1| - 5.6e-09 35.4 0.4 1.5e-07 30.7 0.4 2.3 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 gi|16082244|ref|NP_394695.1| - 3.2e-08 33.3 0.7 7.7e-08 32.1 0.1 1.8 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|16082244|ref|NP_394695.1| - 6.9e-06 25.4 0.0 0.0081 15.3 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain NmrA PF05368.13 gi|16082244|ref|NP_394695.1| - 2e-05 24.3 0.7 4.6e-05 23.1 0.6 1.9 1 1 0 1 1 1 1 NmrA-like family GDP_Man_Dehyd PF16363.5 gi|16082244|ref|NP_394695.1| - 0.0058 16.1 0.3 0.11 11.9 0.1 2.5 2 1 0 2 2 2 1 GDP-mannose 4,6 dehydratase Semialdhyde_dh PF01118.24 gi|16082244|ref|NP_394695.1| - 0.05 14.0 0.1 0.091 13.2 0.1 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Glyco_hydro_3_C PF01915.22 gi|16082244|ref|NP_394695.1| - 0.07 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain LSM PF01423.22 gi|16082245|ref|NP_394696.1| - 4.1e-20 71.2 0.7 4.6e-20 71.1 0.7 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|16082245|ref|NP_394696.1| - 0.00022 21.3 0.0 0.00025 21.1 0.0 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain Ribosomal_L37e PF01907.19 gi|16082246|ref|NP_394697.1| - 4.2e-23 81.2 8.7 4.5e-23 81.2 8.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e HypA PF01155.19 gi|16082246|ref|NP_394697.1| - 0.00085 19.3 0.5 0.00089 19.3 0.5 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|16082246|ref|NP_394697.1| - 0.0028 17.5 2.4 0.0036 17.2 2.4 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Rubredoxin_2 PF18073.1 gi|16082246|ref|NP_394697.1| - 0.0029 17.3 3.2 0.33 10.7 0.1 2.3 2 0 0 2 2 2 2 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 gi|16082246|ref|NP_394697.1| - 0.0043 16.7 7.2 0.039 13.6 1.5 2.2 2 0 0 2 2 2 2 DNA directed RNA polymerase, 7 kDa subunit SelR PF01641.18 gi|16082246|ref|NP_394697.1| - 0.0092 16.1 0.0 0.01 15.9 0.0 1.1 1 0 0 1 1 1 1 SelR domain DZR PF12773.7 gi|16082246|ref|NP_394697.1| - 0.01 15.9 0.7 0.013 15.5 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|16082246|ref|NP_394697.1| - 0.018 14.4 2.9 0.58 9.6 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|16082246|ref|NP_394697.1| - 0.019 14.9 5.4 0.18 11.8 1.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|16082246|ref|NP_394697.1| - 0.083 12.6 6.0 0.31 10.8 5.8 1.8 1 1 1 2 2 2 0 zinc-ribbon domain zn-ribbon_14 PF16503.5 gi|16082246|ref|NP_394697.1| - 0.13 11.8 2.1 7 6.2 0.3 2.2 2 0 0 2 2 2 0 Zinc-ribbon UPF0547 PF10571.9 gi|16082246|ref|NP_394697.1| - 0.17 12.0 6.9 0.34 11.1 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-LSD1 PF06943.12 gi|16082246|ref|NP_394697.1| - 0.4 10.6 6.1 4.5 7.2 1.4 2.3 2 0 0 2 2 2 0 LSD1 zinc finger Zn-ribbon_8 PF09723.10 gi|16082246|ref|NP_394697.1| - 0.49 10.6 4.7 1.8 8.8 4.9 1.8 1 1 1 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.8 gi|16082246|ref|NP_394697.1| - 0.83 9.6 10.0 1.7 8.6 10.0 1.5 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) GATase_6 PF13522.6 gi|16082247|ref|NP_394698.1| - 3.7e-22 79.0 0.0 6.3e-22 78.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|16082247|ref|NP_394698.1| - 9.6e-22 77.2 0.0 4.6e-21 75.0 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|16082247|ref|NP_394698.1| - 1.3e-06 28.0 0.0 3.6e-06 26.6 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 gi|16082247|ref|NP_394698.1| - 0.079 11.8 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferases class-II PRTase_2 PF15609.6 gi|16082247|ref|NP_394698.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Nop PF01798.18 gi|16082600|ref|NP_394699.1| - 6.2e-34 117.4 0.0 7.8e-34 117.1 0.0 1.0 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin TruB_N PF01509.18 gi|161760539|ref|NP_394700.2| - 4.3e-25 88.8 0.1 4.4e-14 53.1 0.0 3.2 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|161760539|ref|NP_394700.2| - 1.3e-17 63.6 0.1 2.2e-17 62.9 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|161760539|ref|NP_394700.2| - 4.2e-15 55.5 0.2 9.2e-15 54.4 0.2 1.5 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.12 gi|161760539|ref|NP_394700.2| - 2.6e-05 24.2 0.0 0.00047 20.2 0.0 2.3 2 0 0 2 2 2 1 DKCLD (NUC011) domain UPF0113 PF03657.13 gi|161760539|ref|NP_394700.2| - 8.8e-05 22.7 0.1 0.0003 21.0 0.1 1.9 1 0 0 1 1 1 1 UPF0113 PUA domain PUA_3 PF17785.1 gi|161760539|ref|NP_394700.2| - 0.086 12.7 0.1 0.37 10.6 0.0 2.2 2 0 0 2 2 2 0 PUA-like domain Cytidylate_kin2 PF13189.6 gi|16082249|ref|NP_394701.1| - 8.3e-21 74.9 1.7 3.1e-19 69.8 1.7 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|16082249|ref|NP_394701.1| - 7.8e-19 68.5 0.0 1e-18 68.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|16082249|ref|NP_394701.1| - 7.3e-08 32.9 0.1 5.3e-07 30.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 gi|16082249|ref|NP_394701.1| - 1.4e-07 31.5 0.7 0.00026 20.8 0.2 2.2 1 1 1 2 2 2 2 Cytidylate kinase AAA_33 PF13671.6 gi|16082249|ref|NP_394701.1| - 0.00038 20.6 0.0 0.0027 17.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|16082249|ref|NP_394701.1| - 0.00084 18.7 0.0 0.00096 18.5 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin dNK PF01712.19 gi|16082249|ref|NP_394701.1| - 0.0029 17.5 5.0 0.0043 16.9 0.9 2.7 1 1 2 3 3 3 1 Deoxynucleoside kinase CoaE PF01121.20 gi|16082249|ref|NP_394701.1| - 0.0067 16.1 0.1 0.038 13.7 0.1 2.0 2 0 0 2 2 2 1 Dephospho-CoA kinase Rad17 PF03215.15 gi|16082249|ref|NP_394701.1| - 0.029 14.3 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain PRK PF00485.18 gi|16082249|ref|NP_394701.1| - 0.059 13.1 1.8 0.34 10.6 1.1 2.1 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family SKI PF01202.22 gi|16082249|ref|NP_394701.1| - 0.059 13.5 0.3 0.11 12.6 0.3 1.8 1 1 0 1 1 1 0 Shikimate kinase CPT PF07931.12 gi|16082249|ref|NP_394701.1| - 0.062 13.1 0.1 4.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein TsaE PF02367.17 gi|16082249|ref|NP_394701.1| - 0.077 13.0 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 gi|16082249|ref|NP_394701.1| - 0.29 10.9 0.7 0.61 9.9 0.7 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain EMC3_TMCO1 PF01956.16 gi|16082250|ref|NP_394702.1| - 1.1e-22 80.6 29.1 3.8e-22 78.8 17.2 2.8 1 1 1 2 2 2 2 Integral membrane protein EMC3/TMCO1-like DUF2107 PF09880.9 gi|16082250|ref|NP_394702.1| - 1.5 8.9 7.9 0.33 11.1 2.4 2.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2107) AAA_17 PF13207.6 gi|16082251|ref|NP_394703.1| - 3.7e-37 127.8 0.1 4.7e-37 127.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|16082251|ref|NP_394703.1| - 5.4e-12 46.4 0.0 8.3e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|16082251|ref|NP_394703.1| - 5.7e-05 23.1 0.2 0.034 14.0 0.1 2.1 1 1 1 2 2 2 2 Deoxynucleoside kinase AAA_28 PF13521.6 gi|16082251|ref|NP_394703.1| - 0.0032 17.7 0.2 0.0071 16.6 0.2 1.6 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|16082251|ref|NP_394703.1| - 0.0041 17.3 1.0 0.12 12.5 1.0 2.3 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|16082251|ref|NP_394703.1| - 0.0068 16.6 0.3 0.021 15.0 0.3 1.8 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|16082251|ref|NP_394703.1| - 0.0084 16.0 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|16082251|ref|NP_394703.1| - 0.015 15.7 0.1 0.036 14.5 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF3918 PF13056.6 gi|16082251|ref|NP_394703.1| - 0.016 14.8 0.1 0.033 13.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) NTPase_1 PF03266.15 gi|16082251|ref|NP_394703.1| - 0.042 13.8 0.8 0.12 12.2 0.4 2.0 2 0 0 2 2 2 0 NTPase Viral_helicase1 PF01443.18 gi|16082251|ref|NP_394703.1| - 0.049 13.4 0.0 0.068 12.9 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|16082251|ref|NP_394703.1| - 0.051 13.3 0.6 0.099 12.4 0.5 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|16082251|ref|NP_394703.1| - 0.063 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|16082251|ref|NP_394703.1| - 0.077 12.2 0.1 0.12 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NB-ARC PF00931.22 gi|16082251|ref|NP_394703.1| - 0.1 11.7 0.2 0.15 11.2 0.2 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 gi|16082251|ref|NP_394703.1| - 0.12 12.1 0.2 0.32 10.8 0.2 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|16082251|ref|NP_394703.1| - 0.13 12.6 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|16082251|ref|NP_394703.1| - 0.13 12.7 0.0 0.16 12.4 0.0 1.3 1 1 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 gi|16082251|ref|NP_394703.1| - 0.14 12.6 0.4 0.18 12.2 0.4 1.5 1 1 0 1 1 1 0 AAA ATPase domain SecY PF00344.20 gi|161760538|ref|NP_394704.2| - 9.3e-69 232.0 19.3 9.3e-69 232.0 19.3 2.1 2 0 0 2 2 2 1 SecY translocase Plug_translocon PF10559.9 gi|161760538|ref|NP_394704.2| - 2.4e-10 40.1 0.9 2.4e-10 40.1 0.9 2.5 2 0 0 2 2 2 1 Plug domain of Sec61p SPC25 PF06703.11 gi|161760538|ref|NP_394704.2| - 0.0033 17.2 3.7 0.93 9.3 0.1 2.6 2 0 0 2 2 2 2 Microsomal signal peptidase 25 kDa subunit (SPC25) Ribosomal_L27A PF00828.19 gi|16082253|ref|NP_394705.1| - 6.1e-16 59.3 0.6 8.2e-16 58.9 0.6 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L30 PF00327.20 gi|16082601|ref|NP_394706.1| - 9.4e-14 51.0 0.4 1.7e-13 50.2 0.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5 PF00333.20 gi|16082254|ref|NP_394707.1| - 1.7e-25 88.8 0.3 3.7e-25 87.7 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|16082254|ref|NP_394707.1| - 1.9e-18 65.6 0.2 3.7e-18 64.7 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L5e PF17144.4 gi|16082602|ref|NP_394708.1| - 1.6e-16 60.7 2.7 1.1e-10 41.7 0.7 2.2 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L19e PF01280.20 gi|16082255|ref|NP_394709.1| - 4.8e-43 146.7 10.2 5.2e-43 146.5 10.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e ZapB PF06005.12 gi|16082255|ref|NP_394709.1| - 0.02 15.3 0.3 0.17 12.3 0.0 2.2 2 0 0 2 2 2 0 Cell division protein ZapB betaPIX_CC PF16523.5 gi|16082255|ref|NP_394709.1| - 0.022 14.6 0.6 0.61 10.0 0.0 2.3 2 0 0 2 2 2 0 betaPIX coiled coil CTNNBL PF08216.11 gi|16082255|ref|NP_394709.1| - 0.034 14.3 0.0 0.053 13.7 0.0 1.3 1 0 0 1 1 1 0 Catenin-beta-like, Arm-motif containing nuclear DUF3253 PF11625.8 gi|16082255|ref|NP_394709.1| - 0.035 14.3 0.5 1.7 8.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3253) Ribosomal_L32e PF01655.18 gi|16082256|ref|NP_394710.1| - 3.3e-38 130.4 0.3 5e-38 129.8 0.2 1.3 1 1 0 1 1 1 1 Ribosomal protein L32 Ubiq-Cytc-red_N PF09165.10 gi|16082256|ref|NP_394710.1| - 0.044 14.7 0.0 0.077 13.9 0.0 1.4 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal Ribosomal_L6 PF00347.23 gi|16082257|ref|NP_394711.1| - 8.8e-15 55.1 7.5 5.5e-10 39.8 0.9 2.2 2 0 0 2 2 2 2 Ribosomal protein L6 LEA_2 PF03168.13 gi|16082257|ref|NP_394711.1| - 0.086 13.4 0.2 8 7.1 0.0 2.1 1 1 0 2 2 2 0 Late embryogenesis abundant protein Ribosomal_S8 PF00410.19 gi|16082258|ref|NP_394712.1| - 2.1e-25 89.1 0.2 2.5e-25 88.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|16082259|ref|NP_394713.1| - 2.2e-12 46.5 4.1 2.4e-12 46.4 4.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Ribosomal_L5_C PF00673.21 gi|16082260|ref|NP_394714.1| - 2e-24 85.6 0.5 9.8e-23 80.2 0.1 2.4 1 1 1 2 2 2 2 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|16082260|ref|NP_394714.1| - 5.1e-20 71.6 0.3 1.1e-19 70.5 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|16082261|ref|NP_394715.1| - 1.5e-21 76.1 0.5 4.2e-21 74.6 0.0 2.0 2 0 0 2 2 2 1 Ribosomal family S4e S4 PF01479.25 gi|16082261|ref|NP_394715.1| - 7.1e-06 25.7 0.0 1.6e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 gi|16082261|ref|NP_394715.1| - 0.00013 21.8 0.6 0.00086 19.2 0.0 2.6 3 0 0 3 3 3 1 KOW motif S4_2 PF13275.6 gi|16082261|ref|NP_394715.1| - 0.0016 18.2 0.2 0.0051 16.6 0.2 1.9 1 0 0 1 1 1 1 S4 domain RS4NT PF08071.12 gi|16082261|ref|NP_394715.1| - 0.0057 16.7 0.6 0.0057 16.7 0.6 1.8 2 0 0 2 2 2 1 RS4NT (NUC023) domain UPF0128 PF03673.13 gi|16082261|ref|NP_394715.1| - 0.019 14.5 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) DUF3912 PF13051.6 gi|16082261|ref|NP_394715.1| - 0.041 14.2 0.1 0.16 12.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3912) Ribosomal_L26 PF16906.5 gi|16082661|ref|NP_394716.1| - 1.9e-12 47.5 0.0 3e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|16082661|ref|NP_394716.1| - 0.00086 19.2 4.4 0.002 18.0 4.4 1.7 1 0 0 1 1 1 1 KOW motif U79_P34 PF03064.16 gi|16082661|ref|NP_394716.1| - 0.034 13.5 1.4 0.054 12.9 0.7 1.6 1 1 1 2 2 2 0 HSV U79 / HCMV P34 Ribosomal_L14 PF00238.19 gi|16082262|ref|NP_394717.1| - 6.6e-35 119.9 0.0 7.6e-35 119.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.20 gi|16082263|ref|NP_394718.1| - 5.5e-24 84.1 2.9 7.1e-24 83.7 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|16082263|ref|NP_394718.1| - 0.0027 18.0 0.0 0.0073 16.7 0.0 1.8 2 0 0 2 2 2 1 Ribosomal_S17 N-terminal UPF0086 PF01868.16 gi|16082662|ref|NP_394719.1| - 8.9e-15 54.4 0.0 1.1e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function UPF0086 SUI1 PF01253.22 gi|16082603|ref|NP_394720.1| - 3.1e-23 82.1 2.0 3.6e-23 81.9 2.0 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|16082603|ref|NP_394720.1| - 4.7e-05 23.6 0.2 5.7e-05 23.3 0.2 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DUF2179 PF10035.9 gi|16082603|ref|NP_394720.1| - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) GMP_synt_C PF00958.22 gi|16082603|ref|NP_394720.1| - 0.14 12.3 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 GMP synthase C terminal domain Ribosomal_L29 PF00831.23 gi|16082663|ref|NP_394721.1| - 5.5e-15 55.1 1.1 7.3e-15 54.7 1.1 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Enkurin PF13864.6 gi|16082663|ref|NP_394721.1| - 0.0021 18.5 0.5 0.0027 18.1 0.5 1.3 1 0 0 1 1 1 1 Calmodulin-binding DUF2299 PF10061.9 gi|16082663|ref|NP_394721.1| - 0.14 11.9 0.1 0.17 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) HTH_22 PF13309.6 gi|16082663|ref|NP_394721.1| - 0.24 11.5 1.6 0.3 11.2 0.8 1.5 2 0 0 2 2 2 0 HTH domain Ribosomal_S3_C PF00189.20 gi|16082264|ref|NP_394722.1| - 2.1e-19 69.8 1.2 4.5e-19 68.8 1.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|16082264|ref|NP_394722.1| - 5.5e-12 45.3 0.0 1.5e-11 43.9 0.0 1.7 1 0 0 1 1 1 1 KH domain Ribosomal_L22 PF00237.19 gi|16082265|ref|NP_394723.1| - 4.9e-24 84.5 0.1 6e-24 84.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e GCHY-1 PF02649.14 gi|16082265|ref|NP_394723.1| - 0.047 13.2 0.0 0.049 13.1 0.0 1.1 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 Ribosomal_S19 PF00203.21 gi|16082266|ref|NP_394724.1| - 1.9e-26 91.7 0.4 1.9e-26 91.7 0.4 1.7 2 0 0 2 2 2 1 Ribosomal protein S19 Ribosomal_L2_C PF03947.18 gi|16082267|ref|NP_394725.1| - 1.1e-40 138.7 1.1 1.8e-40 138.0 0.6 1.5 2 0 0 2 2 2 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|16082267|ref|NP_394725.1| - 4.3e-05 23.4 0.0 0.00012 22.0 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 gi|16082268|ref|NP_394726.1| - 5.6e-16 58.7 4.6 6.7e-15 55.2 4.6 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L4 PF00573.22 gi|16082269|ref|NP_394727.1| - 1.5e-38 132.5 0.1 1.7e-38 132.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|16082270|ref|NP_394728.1| - 2.1e-71 240.8 2.5 2.9e-69 233.8 2.5 2.0 1 1 0 1 1 1 1 Ribosomal protein L3 Epimerase PF01370.21 gi|16082271|ref|NP_394729.1| - 1.4e-19 70.5 0.0 1.9e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF1731 PF08338.11 gi|16082271|ref|NP_394729.1| - 5.4e-17 61.4 0.0 9.1e-17 60.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) GDP_Man_Dehyd PF16363.5 gi|16082271|ref|NP_394729.1| - 7.7e-06 25.5 0.1 0.00014 21.4 0.0 2.5 1 1 1 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|16082271|ref|NP_394729.1| - 0.0005 19.3 0.0 0.42 9.7 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain SNARE_assoc PF09335.11 gi|16082272|ref|NP_394730.1| - 6.4e-11 42.8 6.8 6.4e-11 42.8 6.8 1.9 1 1 1 2 2 2 1 SNARE associated Golgi protein Peptidase_M50 PF02163.22 gi|16082273|ref|NP_394731.1| - 2.7e-32 112.0 5.4 4.9e-32 111.2 5.4 1.4 1 0 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|16082273|ref|NP_394731.1| - 1.7e-08 34.6 0.5 5.7e-05 23.4 0.2 2.4 1 1 1 2 2 2 2 PDZ domain PDZ PF00595.24 gi|16082273|ref|NP_394731.1| - 5.4e-05 23.5 4.4 0.0059 16.9 0.1 3.9 3 1 1 4 4 4 1 PDZ domain PDZ_6 PF17820.1 gi|16082273|ref|NP_394731.1| - 0.057 13.3 0.0 0.24 11.3 0.0 2.1 1 1 1 2 2 2 0 PDZ domain Radical_SAM PF04055.21 gi|16082274|ref|NP_394732.1| - 1.1e-24 87.7 0.0 2.1e-24 86.8 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Wyosine_form PF08608.12 gi|16082274|ref|NP_394732.1| - 4.2e-19 68.7 0.0 9e-19 67.6 0.0 1.6 1 0 0 1 1 1 1 Wyosine base formation Fer4_12 PF13353.6 gi|16082274|ref|NP_394732.1| - 0.0039 17.4 0.0 0.0072 16.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Cpn60_TCP1 PF00118.24 gi|16082275|ref|NP_394733.1| - 2.4e-177 590.5 16.1 2.8e-177 590.3 16.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Phage_tube PF04985.14 gi|16082275|ref|NP_394733.1| - 0.016 14.9 2.3 0.07 12.8 0.1 2.5 3 0 0 3 3 3 0 Phage tail tube protein FII TMP-TENI PF02581.17 gi|16082276|ref|NP_394734.1| - 3.9e-59 199.0 0.0 4.6e-59 198.8 0.0 1.0 1 0 0 1 1 1 1 Thiamine monophosphate synthase ThiG PF05690.14 gi|16082276|ref|NP_394734.1| - 0.043 13.1 0.0 0.078 12.3 0.0 1.3 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|16082276|ref|NP_394734.1| - 0.051 13.0 0.0 0.086 12.3 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein Aldolase PF01081.19 gi|16082276|ref|NP_394734.1| - 0.16 11.3 0.0 0.31 10.4 0.0 1.4 1 0 0 1 1 1 0 KDPG and KHG aldolase AIRS_C PF02769.22 gi|16082277|ref|NP_394735.1| - 5.9e-29 101.2 0.0 8.7e-29 100.7 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|16082277|ref|NP_394735.1| - 8.4e-11 42.4 0.1 1.5e-10 41.6 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AA_permease_2 PF13520.6 gi|16082278|ref|NP_394736.1| - 6.1e-25 87.9 46.3 7.5e-25 87.6 46.3 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|16082278|ref|NP_394736.1| - 4.7e-20 71.6 50.0 8.7e-20 70.8 50.0 1.3 1 1 0 1 1 1 1 Amino acid permease ABC_tran PF00005.27 gi|16082279|ref|NP_394737.1| - 7.4e-44 149.6 0.0 7.6e-22 78.3 0.0 2.3 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|16082279|ref|NP_394737.1| - 2.2e-12 47.3 0.3 3e-10 40.5 0.3 2.6 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|16082279|ref|NP_394737.1| - 2.3e-09 37.5 12.3 0.013 15.3 0.1 4.2 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|16082279|ref|NP_394737.1| - 1.4e-08 35.1 0.8 0.00014 22.2 0.0 3.7 2 2 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|16082279|ref|NP_394737.1| - 1.4e-06 28.9 0.0 0.1 13.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.25 gi|16082279|ref|NP_394737.1| - 1.3e-05 25.0 0.0 0.16 11.6 0.0 2.3 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.29 gi|16082279|ref|NP_394737.1| - 1.8e-05 25.1 0.0 0.087 13.3 0.0 3.2 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|16082279|ref|NP_394737.1| - 2.4e-05 23.9 4.4 0.22 10.9 0.3 3.8 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 gi|16082279|ref|NP_394737.1| - 0.0001 21.6 0.1 0.043 13.0 0.0 2.5 2 1 0 2 2 2 1 NB-ARC domain AAA_16 PF13191.6 gi|16082279|ref|NP_394737.1| - 0.0002 21.8 0.0 0.82 10.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_14 PF13173.6 gi|16082279|ref|NP_394737.1| - 0.0002 21.4 0.2 0.15 12.1 0.0 3.4 3 0 0 3 3 3 1 AAA domain MobB PF03205.14 gi|16082279|ref|NP_394737.1| - 0.00021 21.2 0.1 0.66 9.9 0.0 2.5 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 gi|16082279|ref|NP_394737.1| - 0.00024 21.3 0.1 0.17 12.1 0.0 3.6 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|16082279|ref|NP_394737.1| - 0.0005 19.8 1.3 0.093 12.5 0.1 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|16082279|ref|NP_394737.1| - 0.00067 19.6 0.7 1.8 8.4 0.1 2.9 3 0 0 3 3 3 2 RsgA GTPase AAA_24 PF13479.6 gi|16082279|ref|NP_394737.1| - 0.0021 17.8 0.3 0.39 10.4 0.1 2.6 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|16082279|ref|NP_394737.1| - 0.0026 18.0 0.5 0.51 10.5 0.0 2.7 3 0 0 3 3 2 1 AAA domain DUF87 PF01935.17 gi|16082279|ref|NP_394737.1| - 0.0044 17.1 6.8 0.16 12.1 0.4 2.8 3 0 0 3 3 2 2 Helicase HerA, central domain NACHT PF05729.12 gi|16082279|ref|NP_394737.1| - 0.0046 16.9 4.0 0.71 9.8 0.2 3.0 3 0 0 3 3 2 2 NACHT domain AAA_30 PF13604.6 gi|16082279|ref|NP_394737.1| - 0.0052 16.5 0.4 1.5 8.5 0.1 2.8 2 1 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|16082279|ref|NP_394737.1| - 0.0063 16.2 0.1 2.9 7.5 0.0 2.6 2 0 0 2 2 2 1 Thymidylate kinase PduV-EutP PF10662.9 gi|16082279|ref|NP_394737.1| - 0.011 15.4 0.1 6.6 6.5 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_23 PF13476.6 gi|16082279|ref|NP_394737.1| - 0.012 16.2 3.2 2.7 8.4 0.5 2.5 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|16082279|ref|NP_394737.1| - 0.016 15.5 1.7 1.8 8.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|16082279|ref|NP_394737.1| - 0.017 15.0 0.2 0.48 10.3 0.0 2.9 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea Viral_helicase1 PF01443.18 gi|16082279|ref|NP_394737.1| - 0.021 14.6 1.3 0.75 9.5 0.0 2.7 3 0 0 3 3 3 0 Viral (Superfamily 1) RNA helicase MMR_HSR1 PF01926.23 gi|16082279|ref|NP_394737.1| - 0.028 14.5 1.1 7.2 6.7 0.1 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase SRP54 PF00448.22 gi|16082279|ref|NP_394737.1| - 0.039 13.6 0.7 4.4 6.9 0.0 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|16082279|ref|NP_394737.1| - 0.055 12.4 0.2 3.4 6.6 0.1 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATPase PF06745.13 gi|16082279|ref|NP_394737.1| - 0.063 12.6 1.1 9.4 5.5 0.1 2.4 2 0 0 2 2 2 0 KaiC T2SSE PF00437.20 gi|16082279|ref|NP_394737.1| - 0.11 11.5 0.2 3.3 6.7 0.1 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_17 PF13207.6 gi|16082279|ref|NP_394737.1| - 0.11 12.9 2.7 12 6.3 0.0 3.5 4 0 0 4 4 4 0 AAA domain cobW PF02492.19 gi|16082279|ref|NP_394737.1| - 0.12 12.0 2.5 3.9 7.0 0.4 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.22 gi|16082279|ref|NP_394737.1| - 0.13 12.7 0.1 14 6.1 0.0 2.6 2 0 0 2 2 2 0 RNA helicase IstB_IS21 PF01695.17 gi|16082279|ref|NP_394737.1| - 0.14 11.8 1.8 21 4.8 0.0 3.5 4 0 0 4 4 3 0 IstB-like ATP binding protein dNK PF01712.19 gi|16082279|ref|NP_394737.1| - 1.4 8.7 4.8 13 5.5 0.6 3.0 2 0 0 2 2 2 0 Deoxynucleoside kinase Phos_pyr_kin PF08543.12 gi|16082280|ref|NP_394738.1| - 9.5e-92 306.8 0.0 1.1e-91 306.6 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|16082280|ref|NP_394738.1| - 5.4e-11 42.3 0.0 7e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|16082280|ref|NP_394738.1| - 0.0028 17.2 0.0 0.0073 15.8 0.0 1.7 1 1 0 1 1 1 1 Carbohydrate kinase Tn916-Xis PF09035.10 gi|16082280|ref|NP_394738.1| - 0.15 12.3 0.0 0.31 11.3 0.0 1.5 1 0 0 1 1 1 0 Excisionase from transposon Tn916 HTH_3 PF01381.22 gi|16082604|ref|NP_394739.1| - 3.1e-08 33.6 0.0 1.3e-07 31.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|16082604|ref|NP_394739.1| - 1e-05 25.7 0.0 2e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|16082604|ref|NP_394739.1| - 2.1e-05 24.4 0.0 4.2e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain tRNA_bind PF01588.20 gi|16082281|ref|NP_394740.1| - 4.6e-26 90.8 0.1 5.1e-26 90.6 0.1 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain DELLA PF12041.8 gi|16082281|ref|NP_394740.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.5 2 0 0 2 2 2 0 Transcriptional regulator DELLA protein N terminal AAA PF00004.29 gi|16082282|ref|NP_394741.1| - 2.4e-13 50.7 0.0 7.9e-13 49.0 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|16082282|ref|NP_394741.1| - 3.2e-06 27.2 0.1 0.00017 21.5 0.0 2.3 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_22 PF13401.6 gi|16082282|ref|NP_394741.1| - 9e-06 26.0 0.0 0.00044 20.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|16082282|ref|NP_394741.1| - 0.00018 21.5 0.0 0.0004 20.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|16082282|ref|NP_394741.1| - 0.00033 20.4 0.0 0.00064 19.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|16082282|ref|NP_394741.1| - 0.00083 19.4 0.1 0.0027 17.8 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|16082282|ref|NP_394741.1| - 0.0014 18.4 0.0 0.0032 17.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 gi|16082282|ref|NP_394741.1| - 0.0025 17.7 0.2 0.0042 16.9 0.2 1.4 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ATPase PF06745.13 gi|16082282|ref|NP_394741.1| - 0.0062 15.9 0.0 0.016 14.5 0.0 1.8 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.6 gi|16082282|ref|NP_394741.1| - 0.0063 16.9 0.0 0.037 14.4 0.0 1.8 1 1 0 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 gi|16082282|ref|NP_394741.1| - 0.0074 16.5 0.0 0.039 14.2 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|16082282|ref|NP_394741.1| - 0.0083 15.7 0.0 0.018 14.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|16082282|ref|NP_394741.1| - 0.018 14.3 0.0 0.039 13.2 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_6 PF12774.7 gi|16082282|ref|NP_394741.1| - 0.019 13.9 0.0 0.041 12.9 0.0 1.5 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region T2SSE PF00437.20 gi|16082282|ref|NP_394741.1| - 0.025 13.7 0.0 0.048 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RFC1 PF08519.12 gi|16082282|ref|NP_394741.1| - 0.074 13.2 0.8 0.22 11.7 0.2 2.0 2 0 0 2 2 2 0 Replication factor RFC1 C terminal domain ResIII PF04851.15 gi|16082282|ref|NP_394741.1| - 0.097 12.7 0.5 0.41 10.6 0.1 2.1 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit IPT PF01745.16 gi|16082282|ref|NP_394741.1| - 0.11 11.9 0.1 0.22 10.9 0.1 1.4 1 0 0 1 1 1 0 Isopentenyl transferase Ribosomal_L15e PF00827.17 gi|16082605|ref|NP_394742.1| - 3e-78 261.9 3.1 3.4e-78 261.8 3.1 1.0 1 0 0 1 1 1 1 Ribosomal L15 Sugar_tr PF00083.24 gi|16082283|ref|NP_394743.1| - 2.5e-45 155.2 25.2 5.9e-45 154.0 25.2 1.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16082283|ref|NP_394743.1| - 9e-25 87.3 43.5 1.7e-23 83.1 34.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Proteasome PF00227.26 gi|16082284|ref|NP_394744.1| - 4e-60 202.6 0.2 4.9e-60 202.3 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|16082284|ref|NP_394744.1| - 2.2e-14 52.8 0.1 3.8e-14 52.0 0.1 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature EF1_GNE PF00736.19 gi|16082284|ref|NP_394744.1| - 0.068 13.4 0.1 1.1 9.5 0.1 2.6 3 0 0 3 3 3 0 EF-1 guanine nucleotide exchange domain Nse4-Nse3_bdg PF15412.6 gi|16082284|ref|NP_394744.1| - 0.16 12.1 0.0 0.36 11.0 0.0 1.6 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE SBDS PF01172.18 gi|16082606|ref|NP_394745.1| - 5.4e-20 71.3 0.6 1.5e-19 69.9 0.2 1.8 2 0 0 2 2 2 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|16082606|ref|NP_394745.1| - 2.3e-17 63.1 0.0 4e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 SBDS protein C-terminal domain AMP-binding_C_2 PF14535.6 gi|16082606|ref|NP_394745.1| - 0.0039 17.5 2.3 0.012 15.9 1.3 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain HI0933_like PF03486.14 gi|16082606|ref|NP_394745.1| - 0.048 12.4 0.1 0.069 11.8 0.1 1.2 1 0 0 1 1 1 0 HI0933-like protein DUF4062 PF13271.6 gi|16082606|ref|NP_394745.1| - 0.17 12.3 0.2 0.38 11.1 0.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4062) KH_1 PF00013.29 gi|16082285|ref|NP_394746.1| - 4.2e-06 26.5 1.1 9.7e-06 25.3 1.1 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|16082285|ref|NP_394746.1| - 1.5e-05 24.7 0.6 4.4e-05 23.2 0.6 1.7 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|16082285|ref|NP_394746.1| - 0.00012 22.4 0.0 0.00088 19.6 0.0 2.3 3 0 0 3 3 3 1 S1 RNA binding domain KH_6 PF15985.5 gi|16082285|ref|NP_394746.1| - 0.00014 22.1 0.7 0.00024 21.4 0.7 1.4 1 0 0 1 1 1 1 KH domain TFA2_Winged_2 PF18121.1 gi|16082285|ref|NP_394746.1| - 0.0042 16.7 0.5 0.062 13.0 0.0 2.4 2 1 0 2 2 2 1 TFA2 Winged helix domain 2 RNase_PH PF01138.21 gi|16082286|ref|NP_394747.1| - 1.6e-33 116.0 0.0 2.3e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|16082286|ref|NP_394747.1| - 5.9e-16 58.3 0.8 1.1e-15 57.4 0.8 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|16082607|ref|NP_394748.1| - 2.6e-29 102.4 0.0 3.8e-29 101.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|16082607|ref|NP_394748.1| - 3.6e-12 46.1 0.3 7e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.19 gi|16082287|ref|NP_394749.1| - 1.1e-27 95.9 5.7 1.2e-27 95.8 5.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|16082287|ref|NP_394749.1| - 2.5e-05 24.2 3.9 3.4e-05 23.7 3.9 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Rep_fac-A_C PF08646.10 gi|16082287|ref|NP_394749.1| - 0.0003 20.6 1.6 0.00032 20.5 1.6 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain OrfB_Zn_ribbon PF07282.11 gi|16082287|ref|NP_394749.1| - 0.0052 16.7 1.8 0.0089 15.9 1.8 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|16082287|ref|NP_394749.1| - 0.0073 16.4 1.0 0.3 11.2 0.1 2.2 2 0 0 2 2 2 1 Zinc ribbon domain RPA_interact_C PF14768.6 gi|16082287|ref|NP_394749.1| - 0.017 15.7 0.1 0.021 15.4 0.1 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal zf-H2C2_2 PF13465.6 gi|16082287|ref|NP_394749.1| - 0.02 15.3 6.6 1.7 9.2 1.6 2.2 1 1 1 2 2 2 0 Zinc-finger double domain zf-ribbon_3 PF13248.6 gi|16082287|ref|NP_394749.1| - 0.021 14.2 3.5 1.3 8.5 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_11 PF16622.5 gi|16082287|ref|NP_394749.1| - 0.058 13.2 0.3 0.058 13.2 0.3 1.7 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-RING_7 PF02591.15 gi|16082287|ref|NP_394749.1| - 0.062 13.5 0.4 3.2 8.0 0.0 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|16082287|ref|NP_394749.1| - 0.071 12.8 3.7 0.14 11.9 3.7 1.5 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Rubredoxin PF00301.20 gi|16082287|ref|NP_394749.1| - 0.089 12.8 2.1 8.8 6.5 0.4 2.2 2 0 0 2 2 2 0 Rubredoxin DUF1131 PF06572.12 gi|16082287|ref|NP_394749.1| - 0.11 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1131) CpXC PF14353.6 gi|16082287|ref|NP_394749.1| - 0.13 12.3 2.2 1.8 8.6 0.1 2.1 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_4 PF13717.6 gi|16082287|ref|NP_394749.1| - 0.16 11.9 4.2 3.2 7.7 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|16082287|ref|NP_394749.1| - 0.3 11.0 3.9 2.5 8.1 4.0 2.0 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit Zn_ribbon_SprT PF17283.2 gi|16082287|ref|NP_394749.1| - 0.37 10.8 7.9 0.87 9.6 7.9 1.6 1 1 0 1 1 1 0 SprT-like zinc ribbon domain UPF0547 PF10571.9 gi|16082287|ref|NP_394749.1| - 0.46 10.6 8.2 0.33 11.1 0.9 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_10 PF10058.9 gi|16082287|ref|NP_394749.1| - 0.92 9.3 4.5 19 5.0 0.3 2.2 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Rubredoxin_2 PF18073.1 gi|16082287|ref|NP_394749.1| - 1.2 8.9 8.3 0.57 10.0 1.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-C2H2 PF00096.26 gi|16082287|ref|NP_394749.1| - 1.3 9.6 5.4 8.5 7.0 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type DNA_RNApol_7kD PF03604.13 gi|16082664|ref|NP_394750.1| - 4.3e-05 23.1 3.2 6e-05 22.6 3.2 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit DUF1922 PF09082.10 gi|16082664|ref|NP_394750.1| - 0.00033 20.9 1.6 0.00034 20.9 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) Zn-ribbon_8 PF09723.10 gi|16082664|ref|NP_394750.1| - 0.0015 18.6 2.1 0.0021 18.1 2.1 1.2 1 0 0 1 1 1 1 Zinc ribbon domain THUMP PF02926.17 gi|16082288|ref|NP_394751.1| - 1.4e-08 35.0 0.0 3.2e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 THUMP domain DUF2856 PF11043.8 gi|16082288|ref|NP_394751.1| - 0.06 13.5 0.2 0.21 11.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2856) Ribosomal_L21e PF01157.18 gi|16082289|ref|NP_394752.1| - 8.4e-27 93.0 0.4 9.4e-27 92.8 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|16082290|ref|NP_394753.1| - 5.8e-06 26.6 0.5 7e-06 26.4 0.5 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF655 PF04919.12 gi|16082291|ref|NP_394754.1| - 3.4e-71 238.9 0.4 3.8e-71 238.8 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|16082291|ref|NP_394754.1| - 2e-05 24.8 0.0 6.3e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|16082291|ref|NP_394754.1| - 0.0017 18.6 0.0 0.0044 17.2 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|16082291|ref|NP_394754.1| - 0.17 12.5 0.4 6.1 7.5 0.2 2.8 1 1 1 3 3 3 0 Helix-hairpin-helix domain RrnaAD PF00398.20 gi|16082608|ref|NP_394755.1| - 6.6e-34 117.2 0.0 7.8e-34 116.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 gi|16082608|ref|NP_394755.1| - 0.00026 20.9 0.0 0.00044 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16082608|ref|NP_394755.1| - 0.019 15.7 0.0 0.039 14.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|16082608|ref|NP_394755.1| - 0.025 14.0 0.0 0.055 12.9 0.0 1.6 2 0 0 2 2 2 0 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|16082608|ref|NP_394755.1| - 0.037 14.7 0.0 0.082 13.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 gi|16082608|ref|NP_394755.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Band_7 PF01145.25 gi|16082292|ref|NP_394756.1| - 9.2e-32 110.5 3.0 1.3e-31 110.0 3.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|16082292|ref|NP_394756.1| - 0.00085 19.1 0.2 0.0019 17.9 0.1 1.7 1 1 0 1 1 1 1 SPFH domain-Band 7 family DUF2605 PF10792.9 gi|16082292|ref|NP_394756.1| - 0.013 15.4 0.5 0.028 14.4 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2605) KH_8 PF17903.1 gi|16082293|ref|NP_394757.1| - 0.025 14.6 1.0 0.05 13.7 1.0 1.6 1 1 0 1 1 1 0 Krr1 KH1 domain Sec61_beta PF03911.16 gi|16082665|ref|NP_394758.1| - 3e-14 52.7 0.1 3.4e-14 52.6 0.1 1.1 1 0 0 1 1 1 1 Sec61beta family Adeno_E3A PF05248.12 gi|16082665|ref|NP_394758.1| - 0.032 14.2 0.0 0.034 14.2 0.0 1.0 1 0 0 1 1 1 0 Adenovirus E3A GHMP_kinases_N PF00288.26 gi|16082294|ref|NP_394759.1| - 2.4e-08 34.1 0.1 5.2e-08 33.0 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|16082294|ref|NP_394759.1| - 3.6e-07 30.4 0.0 3.6e-07 30.4 0.0 2.4 3 0 0 3 3 3 1 GHMP kinases C terminal MBF2 PF15868.5 gi|16082294|ref|NP_394759.1| - 0.15 12.6 0.0 0.28 11.8 0.0 1.5 1 0 0 1 1 1 0 Transcription activator MBF2 SbmA_BacA PF05992.12 gi|16082295|ref|NP_394760.1| - 0.0081 15.6 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 SbmA/BacA-like family Usp PF00582.26 gi|16082297|ref|NP_394762.1| - 1.8e-16 60.9 0.2 1.3e-11 45.2 0.2 3.1 2 1 0 2 2 2 2 Universal stress protein family KdpC PF02669.15 gi|16082609|ref|NP_394763.1| - 2.7e-45 154.5 0.0 3e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain E1-E2_ATPase PF00122.20 gi|16082298|ref|NP_394764.1| - 1.9e-37 128.5 3.3 1.9e-37 128.5 3.3 3.0 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 gi|16082298|ref|NP_394764.1| - 7.3e-25 88.5 0.2 1.5e-24 87.5 0.2 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|16082298|ref|NP_394764.1| - 1.1e-08 35.1 4.7 1.1e-05 25.3 2.7 2.5 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase CBS PF00571.28 gi|16082298|ref|NP_394764.1| - 0.03 14.8 0.0 0.1 13.1 0.0 1.9 1 0 0 1 1 1 0 CBS domain HAD PF12710.7 gi|16082298|ref|NP_394764.1| - 0.03 14.7 0.0 0.12 12.8 0.0 1.9 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase KdpA PF03814.15 gi|16082299|ref|NP_394765.1| - 9.6e-173 575.3 35.2 1.2e-172 574.9 35.2 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit DUF1269 PF06897.12 gi|16082299|ref|NP_394765.1| - 8 6.8 7.2 11 6.4 0.5 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) Radical_SAM_C PF16199.5 gi|16082300|ref|NP_394766.1| - 6.6e-29 99.8 0.2 1.3e-28 98.8 0.2 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|16082300|ref|NP_394766.1| - 7.6e-22 78.4 0.3 4.5e-19 69.4 0.0 2.8 3 0 0 3 3 3 2 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|16082300|ref|NP_394766.1| - 3.5e-07 30.5 0.8 7.5e-07 29.4 0.8 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|16082300|ref|NP_394766.1| - 0.00035 20.5 0.0 0.0057 16.6 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Methyltrans_SAM PF10672.9 gi|16082300|ref|NP_394766.1| - 0.087 12.0 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase polyprenyl_synt PF00348.17 gi|16082302|ref|NP_394768.1| - 7.8e-54 182.4 0.0 9.7e-54 182.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Phage_integrase PF00589.22 gi|16082303|ref|NP_394769.1| - 1.9e-49 167.7 0.1 3.2e-49 167.0 0.1 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|16082303|ref|NP_394769.1| - 2.4e-16 60.0 1.4 6.7e-16 58.5 1.0 1.9 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|16082303|ref|NP_394769.1| - 6.8e-07 29.5 1.1 1.8e-06 28.1 0.4 2.1 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 gi|16082303|ref|NP_394769.1| - 0.0091 16.3 3.1 0.029 14.7 3.1 1.9 1 0 0 1 1 1 1 Phage integrase SAM-like domain DUF3435 PF11917.8 gi|16082303|ref|NP_394769.1| - 0.017 14.0 0.1 0.093 11.6 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3435) Ribul_P_3_epim PF00834.19 gi|16082304|ref|NP_394770.1| - 7.6e-56 188.6 0.1 8.6e-56 188.5 0.1 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family ADH_N PF08240.12 gi|16082305|ref|NP_394771.1| - 6.8e-21 74.2 0.2 1e-20 73.6 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|16082305|ref|NP_394771.1| - 3.7e-15 56.0 0.0 7.3e-15 55.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|16082305|ref|NP_394771.1| - 2.7e-05 25.2 0.0 5.7e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N_2 PF16884.5 gi|16082305|ref|NP_394771.1| - 0.0027 17.6 0.0 0.0061 16.4 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of oxidoreductase DUF1453 PF07301.11 gi|16082306|ref|NP_394772.1| - 0.0061 16.6 11.3 0.01 15.8 11.3 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1453) Ribosomal_L40e PF01020.17 gi|16082666|ref|NP_394773.1| - 2e-09 37.2 8.1 2.4e-09 36.9 8.1 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DNA_RNApol_7kD PF03604.13 gi|16082666|ref|NP_394773.1| - 0.0027 17.3 7.0 0.0042 16.7 7.0 1.4 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 gi|16082666|ref|NP_394773.1| - 0.0047 16.6 0.8 0.0062 16.2 0.8 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|16082666|ref|NP_394773.1| - 0.0072 16.3 0.6 0.0083 16.1 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon DUF35_N PF12172.8 gi|16082666|ref|NP_394773.1| - 0.17 11.8 1.0 0.17 11.8 1.0 1.9 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) GATase_5 PF13507.6 gi|16082610|ref|NP_394774.1| - 1.2e-61 208.0 0.0 1.4e-61 207.9 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|16082610|ref|NP_394774.1| - 5.3e-06 26.3 0.0 1.1e-05 25.3 0.0 1.5 1 1 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|16082610|ref|NP_394774.1| - 6.2e-05 22.7 0.0 0.00012 21.8 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|16082610|ref|NP_394774.1| - 0.00019 21.3 0.0 0.00032 20.5 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|16082610|ref|NP_394774.1| - 0.12 12.1 0.1 0.28 10.9 0.1 1.8 1 1 0 1 1 1 0 Peptidase C26 Amidohydro_1 PF01979.20 gi|16082307|ref|NP_394775.1| - 2e-15 56.9 0.1 3.2e-13 49.7 0.1 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|16082307|ref|NP_394775.1| - 0.0021 17.6 0.0 0.0041 16.7 0.0 1.4 2 0 0 2 2 2 1 Amidohydrolase family PrmA PF06325.13 gi|16082308|ref|NP_394776.1| - 1e-11 44.8 0.2 1.4e-11 44.4 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|16082308|ref|NP_394776.1| - 6.2e-09 35.6 0.0 8.1e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|16082308|ref|NP_394776.1| - 9.3e-07 29.5 0.0 1.5e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16082308|ref|NP_394776.1| - 1.2e-06 28.4 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16082308|ref|NP_394776.1| - 0.00049 20.7 0.0 0.00079 20.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16082308|ref|NP_394776.1| - 0.0044 16.9 0.0 0.0049 16.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|16082308|ref|NP_394776.1| - 0.069 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|16082308|ref|NP_394776.1| - 0.18 11.4 0.0 0.29 10.8 0.0 1.4 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Lactonase PF10282.9 gi|16082310|ref|NP_394778.1| - 1.3e-18 67.4 11.6 1.3e-07 31.2 0.3 6.5 2 2 3 5 5 5 5 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|16082310|ref|NP_394778.1| - 8.5e-09 35.3 5.1 0.71 9.4 0.1 6.6 2 2 3 6 6 6 4 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|16082310|ref|NP_394778.1| - 4.1e-08 33.3 26.9 0.15 12.3 0.1 8.3 4 3 5 9 9 9 3 Arylesterase NHL PF01436.21 gi|16082310|ref|NP_394778.1| - 2.1e-06 27.5 32.2 4.2 7.6 0.2 11.3 12 1 0 12 12 12 4 NHL repeat Cytochrom_D1 PF02239.16 gi|16082310|ref|NP_394778.1| - 0.00049 18.7 8.3 0.017 13.7 0.4 3.8 2 2 2 4 4 4 3 Cytochrome D1 heme domain DUF4774 PF15999.5 gi|16082310|ref|NP_394778.1| - 4.2 7.3 5.9 5 7.0 1.0 3.7 2 1 2 4 4 4 0 Domain of unknown function (DUF4774) Glyco_hydro_1 PF00232.18 gi|16082311|ref|NP_394779.1| - 5.4e-59 199.8 7.9 4.8e-50 170.3 1.9 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 1 Regulator_TrmB PF11495.8 gi|16082312|ref|NP_394780.1| - 7.2e-64 215.1 0.9 8.9e-64 214.9 0.9 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|16082312|ref|NP_394780.1| - 3.8e-10 39.5 0.0 7.5e-10 38.6 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|16082312|ref|NP_394780.1| - 0.0026 17.5 0.0 0.0045 16.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|16082312|ref|NP_394780.1| - 0.088 12.7 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 MarR family ABC_tran PF00005.27 gi|16082313|ref|NP_394781.1| - 1.7e-26 93.4 0.0 2.3e-26 92.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|16082313|ref|NP_394781.1| - 3.7e-17 62.6 0.0 6.2e-17 61.9 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|16082313|ref|NP_394781.1| - 8.7e-11 42.2 1.7 1.2e-07 31.9 0.5 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|16082313|ref|NP_394781.1| - 8.4e-05 22.9 0.7 0.001 19.3 0.7 2.3 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|16082313|ref|NP_394781.1| - 0.00099 19.1 0.3 0.032 14.2 0.1 2.2 2 0 0 2 2 2 1 NACHT domain AAA_16 PF13191.6 gi|16082313|ref|NP_394781.1| - 0.0022 18.4 0.1 0.0035 17.8 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|16082313|ref|NP_394781.1| - 0.003 17.3 0.0 0.0059 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|16082313|ref|NP_394781.1| - 0.0036 16.5 0.0 0.0077 15.4 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain APS_kinase PF01583.20 gi|16082313|ref|NP_394781.1| - 0.0044 16.9 0.0 0.0085 16.0 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 gi|16082313|ref|NP_394781.1| - 0.007 16.9 0.0 0.014 16.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|16082313|ref|NP_394781.1| - 0.0084 15.9 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family ABC_ATPase PF09818.9 gi|16082313|ref|NP_394781.1| - 0.013 14.3 0.1 0.13 11.0 0.0 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class SMC_N PF02463.19 gi|16082313|ref|NP_394781.1| - 0.015 14.7 0.4 3 7.2 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|16082313|ref|NP_394781.1| - 0.028 14.8 0.0 0.053 14.0 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|16082313|ref|NP_394781.1| - 0.03 14.3 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 gi|16082313|ref|NP_394781.1| - 0.045 13.5 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|16082313|ref|NP_394781.1| - 0.062 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_23 PF13476.6 gi|16082313|ref|NP_394781.1| - 0.064 13.8 0.3 0.11 12.9 0.2 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|16082313|ref|NP_394781.1| - 0.086 13.2 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_14 PF13173.6 gi|16082313|ref|NP_394781.1| - 0.087 12.9 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|16082313|ref|NP_394781.1| - 0.088 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|16082313|ref|NP_394781.1| - 0.095 12.6 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 NTPase DUF87 PF01935.17 gi|16082313|ref|NP_394781.1| - 0.11 12.6 0.1 0.23 11.5 0.1 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|16082313|ref|NP_394781.1| - 0.11 12.6 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|16082313|ref|NP_394781.1| - 0.2 11.3 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|16082313|ref|NP_394781.1| - 0.23 11.4 0.2 0.52 10.2 0.1 1.6 2 0 0 2 2 2 0 RsgA GTPase ABC_tran PF00005.27 gi|16082314|ref|NP_394782.1| - 1.9e-31 109.4 0.0 3e-31 108.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|16082314|ref|NP_394782.1| - 9.3e-07 28.9 1.8 0.019 14.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 gi|16082314|ref|NP_394782.1| - 0.00018 22.0 0.0 0.00031 21.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|16082314|ref|NP_394782.1| - 0.00078 19.7 0.5 0.0093 16.2 0.5 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|16082314|ref|NP_394782.1| - 0.0037 16.7 0.0 0.01 15.3 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|16082314|ref|NP_394782.1| - 0.0039 16.9 0.0 0.0066 16.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain G-alpha PF00503.20 gi|16082314|ref|NP_394782.1| - 0.0062 15.7 0.0 0.0064 15.7 0.0 1.1 1 0 0 1 1 1 1 G-protein alpha subunit Mg_chelatase PF01078.21 gi|16082314|ref|NP_394782.1| - 0.011 15.2 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|16082314|ref|NP_394782.1| - 0.018 15.6 0.0 0.087 13.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|16082314|ref|NP_394782.1| - 0.02 15.2 0.2 0.028 14.8 0.2 1.5 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|16082314|ref|NP_394782.1| - 0.025 14.5 0.1 0.039 13.9 0.1 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 gi|16082314|ref|NP_394782.1| - 0.033 14.3 0.1 0.065 13.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|16082314|ref|NP_394782.1| - 0.035 14.2 0.0 0.053 13.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 gi|16082314|ref|NP_394782.1| - 0.054 13.6 0.0 0.086 12.9 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain TniB PF05621.11 gi|16082314|ref|NP_394782.1| - 0.054 12.9 0.2 0.58 9.5 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 gi|16082314|ref|NP_394782.1| - 0.088 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 gi|16082314|ref|NP_394782.1| - 0.089 12.5 0.0 0.31 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|16082314|ref|NP_394782.1| - 0.14 11.9 0.0 0.24 11.1 0.0 1.5 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 gi|16082314|ref|NP_394782.1| - 0.16 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.6 gi|16082314|ref|NP_394782.1| - 0.2 11.2 0.0 0.48 10.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|16082315|ref|NP_394783.1| - 7.3e-14 51.9 24.1 7.3e-14 51.9 24.1 2.0 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|16082315|ref|NP_394783.1| - 0.055 13.4 0.8 0.055 13.4 0.8 4.0 4 1 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|16082316|ref|NP_394784.1| - 4e-40 137.5 12.8 4e-40 137.5 12.8 1.7 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|16082317|ref|NP_394785.1| - 1.1e-76 258.3 7.4 1.5e-76 257.8 7.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MHYT PF03707.16 gi|16082317|ref|NP_394785.1| - 0.6 10.3 4.8 5.6 7.2 0.2 2.7 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat OTCace PF00185.24 gi|161760537|ref|NP_394786.2| - 2.3e-57 193.5 0.0 3.3e-57 192.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|161760537|ref|NP_394786.2| - 5.5e-43 146.5 0.0 8.6e-43 145.9 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CoA_binding PF02629.19 gi|16082319|ref|NP_394787.1| - 2.8e-21 76.0 0.8 2.8e-21 76.0 0.8 2.4 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|16082319|ref|NP_394787.1| - 5.3e-19 68.5 0.6 8.7e-19 67.8 0.6 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|16082319|ref|NP_394787.1| - 1.1e-11 44.6 0.1 2e-11 43.8 0.1 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain IlvN PF07991.12 gi|16082319|ref|NP_394787.1| - 0.00035 20.2 0.4 0.00057 19.5 0.4 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain DUF1611_N PF17396.2 gi|16082319|ref|NP_394787.1| - 0.017 15.4 0.0 0.083 13.1 0.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain AlaDh_PNT_N PF05222.15 gi|16082319|ref|NP_394787.1| - 0.1 12.9 0.3 1.4 9.2 0.0 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, N-terminal domain ATP-grasp_2 PF08442.10 gi|16082611|ref|NP_394788.1| - 5.8e-56 189.3 0.1 4.2e-55 186.5 0.0 2.0 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|16082611|ref|NP_394788.1| - 4.3e-12 46.1 0.2 7.6e-12 45.3 0.2 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|16082611|ref|NP_394788.1| - 4.6e-10 39.3 0.4 3.9e-07 29.8 0.1 2.3 2 0 0 2 2 2 2 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|16082611|ref|NP_394788.1| - 0.0016 18.0 0.0 0.0029 17.1 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.19 gi|16082611|ref|NP_394788.1| - 0.048 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MFS_1 PF07690.16 gi|16082320|ref|NP_394789.1| - 0.00098 18.1 28.3 0.00098 18.1 28.3 3.1 1 1 2 3 3 3 3 Major Facilitator Superfamily HAD PF12710.7 gi|16082321|ref|NP_394790.1| - 0.0001 22.8 0.0 0.00013 22.4 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|16082321|ref|NP_394790.1| - 0.034 13.9 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Cas_Cas1 PF01867.16 gi|16082322|ref|NP_394791.1| - 4.8e-16 58.7 0.1 7.3e-16 58.1 0.1 1.3 1 0 0 1 1 1 1 CRISPR associated protein Cas1 N6_Mtase PF02384.16 gi|16082323|ref|NP_394792.1| - 1.5e-14 54.0 0.8 3.1e-13 49.7 0.0 2.5 2 0 0 2 2 2 1 N-6 DNA Methylase HSDR_N PF04313.14 gi|16082323|ref|NP_394792.1| - 1e-08 35.4 2.6 0.00022 21.3 0.1 3.1 2 1 1 3 3 3 2 Type I restriction enzyme R protein N terminus (HSDR_N) UPF0020 PF01170.18 gi|16082323|ref|NP_394792.1| - 4.8e-07 29.7 0.0 8.7e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 HSDR_N_2 PF13588.6 gi|16082323|ref|NP_394792.1| - 9.3e-05 22.4 0.2 0.00039 20.4 0.0 2.0 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) Methyltransf_31 PF13847.6 gi|16082323|ref|NP_394792.1| - 0.0012 18.6 0.0 0.0099 15.7 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|16082323|ref|NP_394792.1| - 0.033 14.0 0.0 0.075 12.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|16082323|ref|NP_394792.1| - 0.054 12.9 0.0 0.17 11.3 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) TaqI_C PF12950.7 gi|16082324|ref|NP_394793.1| - 1.4e-16 60.6 1.4 8.1e-16 58.2 1.4 2.2 1 1 0 1 1 1 1 TaqI-like C-terminal specificity domain HIT PF01230.23 gi|16082326|ref|NP_394795.1| - 3.6e-19 69.3 0.3 4.7e-19 68.9 0.3 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|16082326|ref|NP_394795.1| - 4.6e-15 56.1 0.1 6.3e-15 55.7 0.1 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|16082326|ref|NP_394795.1| - 1e-05 25.4 0.1 1.4e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 MFS_1 PF07690.16 gi|16082327|ref|NP_394796.1| - 1.2e-42 146.1 92.5 1.1e-33 116.6 50.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Pyr_redox_2 PF07992.14 gi|16082328|ref|NP_394797.1| - 2.5e-55 187.8 0.5 3.4e-55 187.4 0.5 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|16082328|ref|NP_394797.1| - 1.8e-29 102.2 0.1 3.6e-29 101.2 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|16082328|ref|NP_394797.1| - 1.2e-15 57.8 0.2 4.6e-15 55.9 0.2 2.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|16082328|ref|NP_394797.1| - 5.1e-06 26.0 0.0 8.9e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|16082328|ref|NP_394797.1| - 1.1e-05 24.7 0.0 0.0022 17.2 0.0 3.0 1 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.22 gi|16082328|ref|NP_394797.1| - 5.1e-05 22.5 2.8 0.018 14.2 0.0 2.9 2 1 0 3 3 3 2 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|16082328|ref|NP_394797.1| - 0.0019 18.1 0.2 0.0043 16.9 0.2 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_oxidored PF12831.7 gi|16082328|ref|NP_394797.1| - 0.02 14.3 7.5 3.6 6.8 0.2 3.2 2 1 1 3 3 3 0 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|16082328|ref|NP_394797.1| - 0.044 12.5 8.0 0.099 11.3 0.1 3.5 3 1 1 4 4 4 0 HI0933-like protein HMA PF00403.26 gi|16082329|ref|NP_394798.1| - 1.2e-10 41.7 0.6 1.6e-10 41.3 0.6 1.2 1 0 0 1 1 1 1 Heavy-metal-associated domain HPP PF04982.13 gi|16082330|ref|NP_394799.1| - 5.3e-08 33.1 9.5 5.3e-08 33.1 9.5 2.0 1 1 1 2 2 2 2 HPP family Orai-1 PF07856.12 gi|16082330|ref|NP_394799.1| - 1.3 8.7 11.5 0.78 9.4 9.3 1.7 1 1 1 2 2 2 0 Mediator of CRAC channel activity DUF2070 PF09843.9 gi|16082330|ref|NP_394799.1| - 3.9 5.6 18.9 4.8 5.4 18.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Peptidase_M50 PF02163.22 gi|16082612|ref|NP_394800.1| - 4.6e-12 45.7 12.8 3.8e-06 26.4 2.5 3.3 2 1 1 3 3 3 2 Peptidase family M50 DUF2244 PF10003.9 gi|16082612|ref|NP_394800.1| - 3.4 7.3 4.6 9.3 5.9 4.6 1.7 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) MFS_1 PF07690.16 gi|16082332|ref|NP_394802.1| - 1.7e-38 132.5 55.9 5.7e-22 78.1 33.5 2.0 1 1 0 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|16082332|ref|NP_394802.1| - 2.1e-06 26.4 14.6 0.00021 19.8 9.7 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector LacY_symp PF01306.19 gi|16082332|ref|NP_394802.1| - 6.9e-05 21.8 21.9 6.9e-05 21.8 21.9 2.2 1 1 1 2 2 2 1 LacY proton/sugar symporter His_Phos_1 PF00300.22 gi|16082333|ref|NP_394803.1| - 4.2e-34 117.9 0.0 5.5e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Methyltransf_11 PF08241.12 gi|16082334|ref|NP_394804.1| - 5e-18 65.5 0.0 8.2e-18 64.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16082334|ref|NP_394804.1| - 1e-17 64.6 0.0 1.8e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|16082334|ref|NP_394804.1| - 1.9e-10 41.4 0.0 3.4e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16082334|ref|NP_394804.1| - 4.7e-10 39.5 0.0 7e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|16082334|ref|NP_394804.1| - 5e-10 39.1 0.0 7.5e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|16082334|ref|NP_394804.1| - 2.3e-07 30.8 0.0 3.1e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|16082334|ref|NP_394804.1| - 1.9e-05 24.2 0.0 2.8e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|16082334|ref|NP_394804.1| - 0.0019 17.3 0.0 0.0031 16.6 0.0 1.3 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_15 PF09445.10 gi|16082334|ref|NP_394804.1| - 0.002 17.7 0.1 0.0031 17.1 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 gi|16082334|ref|NP_394804.1| - 0.0027 17.7 0.0 0.0042 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|16082334|ref|NP_394804.1| - 0.0051 16.3 0.1 0.0074 15.7 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|16082334|ref|NP_394804.1| - 0.0065 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|16082334|ref|NP_394804.1| - 0.0098 15.7 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_5 PF01795.19 gi|16082334|ref|NP_394804.1| - 0.021 14.3 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family FtsJ PF01728.19 gi|16082334|ref|NP_394804.1| - 0.029 14.5 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_8 PF05148.15 gi|16082334|ref|NP_394804.1| - 0.065 13.1 0.0 0.28 11.0 0.0 1.8 1 1 0 1 1 1 0 Hypothetical methyltransferase Phosphodiest PF01663.22 gi|16082335|ref|NP_394805.1| - 2e-21 77.0 1.1 7.2e-20 71.9 1.1 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|16082335|ref|NP_394805.1| - 2.6e-07 30.9 0.0 3.2e-06 27.4 0.1 2.0 1 1 0 2 2 2 1 PglZ domain Sulfatase PF00884.23 gi|16082335|ref|NP_394805.1| - 0.093 12.1 0.1 0.18 11.1 0.0 1.5 2 0 0 2 2 2 0 Sulfatase Metalloenzyme PF01676.18 gi|16082335|ref|NP_394805.1| - 0.1 11.9 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Metalloenzyme superfamily AA_kinase PF00696.28 gi|16082613|ref|NP_394806.1| - 2e-30 106.1 0.0 4.5e-30 105.0 0.0 1.5 1 1 0 1 1 1 1 Amino acid kinase family Pribosyltran PF00156.27 gi|16082336|ref|NP_394807.1| - 1.3e-18 67.0 0.0 2.1e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DUF150 PF02576.17 gi|16082336|ref|NP_394807.1| - 0.058 13.8 0.2 31 5.1 0.0 3.0 3 0 0 3 3 3 0 RimP N-terminal domain NUDIX PF00293.28 gi|16082337|ref|NP_394808.1| - 8.5e-17 61.4 0.1 1e-16 61.1 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain Adenosine_kin PF04008.14 gi|16082614|ref|NP_394809.1| - 4.7e-70 234.3 0.1 5.3e-70 234.1 0.1 1.0 1 0 0 1 1 1 1 Adenosine specific kinase TatD_DNase PF01026.21 gi|16082338|ref|NP_394810.1| - 9.5e-19 67.8 0.0 1.5e-18 67.1 0.0 1.2 1 0 0 1 1 1 1 TatD related DNase ENTH PF01417.20 gi|16082339|ref|NP_394811.1| - 0.036 14.1 2.3 0.14 12.2 2.3 1.9 1 1 0 1 1 1 0 ENTH domain PIN_2 PF10130.9 gi|16082339|ref|NP_394811.1| - 0.33 11.2 2.4 0.78 10.0 0.2 2.2 1 1 2 3 3 3 0 PIN domain DUF3463 PF11946.8 gi|16082340|ref|NP_394812.1| - 1e-30 106.3 2.1 1.7e-30 105.6 2.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) Radical_SAM PF04055.21 gi|16082340|ref|NP_394812.1| - 1.2e-16 61.5 0.0 1.8e-16 60.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|16082340|ref|NP_394812.1| - 1.3e-08 35.2 0.0 3e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|16082340|ref|NP_394812.1| - 0.00059 20.0 0.0 0.0023 18.1 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain MraZ PF02381.18 gi|16082340|ref|NP_394812.1| - 0.093 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like GDC-P PF02347.16 gi|16082341|ref|NP_394813.1| - 4.4e-12 45.5 0.0 2.7e-10 39.7 0.0 2.1 2 0 0 2 2 2 2 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|16082341|ref|NP_394813.1| - 8e-11 41.5 0.0 1.3e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|16082341|ref|NP_394813.1| - 3.4e-05 23.3 0.0 5.2e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|16082341|ref|NP_394813.1| - 0.14 11.5 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family GDC-P PF02347.16 gi|16082342|ref|NP_394814.1| - 4.2e-108 361.9 0.0 5.2e-108 361.6 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_1_2 PF00155.21 gi|16082342|ref|NP_394814.1| - 2.9e-06 26.7 0.0 4.8e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Fer4_14 PF13394.6 gi|16082343|ref|NP_394815.1| - 6.1e-12 45.7 0.1 1.3e-11 44.7 0.1 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|16082343|ref|NP_394815.1| - 4.4e-11 43.4 0.1 6.4e-11 42.9 0.1 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|16082343|ref|NP_394815.1| - 1.2e-05 25.6 0.1 1.7e-05 25.1 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF4064 PF13273.6 gi|16082667|ref|NP_394816.1| - 0.47 10.7 22.2 0.11 12.8 9.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF2157 PF09925.9 gi|16082667|ref|NP_394816.1| - 4.4 7.1 13.4 2 8.2 11.2 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) SLATT_5 PF18160.1 gi|16082667|ref|NP_394816.1| - 6.6 6.0 7.9 0.44 9.9 1.6 1.8 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 GMP_synt_C PF00958.22 gi|16082344|ref|NP_394817.1| - 3.9e-34 116.6 0.2 9.1e-34 115.4 0.0 1.7 2 0 0 2 2 2 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|16082344|ref|NP_394817.1| - 2.4e-05 23.6 0.0 7.7e-05 21.9 0.0 1.7 2 0 0 2 2 2 1 NAD synthase QueC PF06508.13 gi|16082344|ref|NP_394817.1| - 7.3e-05 22.4 0.0 0.0042 16.6 0.0 2.1 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|16082344|ref|NP_394817.1| - 8.2e-05 22.4 0.0 0.00012 21.9 0.0 1.2 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|16082344|ref|NP_394817.1| - 0.015 15.4 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Peptidase_S51 PF03575.17 gi|16082344|ref|NP_394817.1| - 0.028 14.1 0.2 0.88 9.2 0.0 2.8 2 1 1 3 3 3 0 Peptidase family S51 FUR PF01475.19 gi|16082615|ref|NP_394818.1| - 2.8e-24 85.5 0.0 3.5e-24 85.3 0.0 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family TF_Zn_Ribbon PF08271.12 gi|16082615|ref|NP_394818.1| - 0.007 15.8 1.2 0.41 10.2 0.1 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding Desulfoferrod_N PF06397.12 gi|16082615|ref|NP_394818.1| - 0.019 14.6 0.8 0.05 13.2 0.8 1.7 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain TRAM_2 PF18693.1 gi|16082615|ref|NP_394818.1| - 0.026 14.7 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 TRAM domain DNAP_B_exo_N PF08452.10 gi|16082615|ref|NP_394818.1| - 1.4 8.4 4.2 22 4.6 4.2 2.4 1 1 0 1 1 1 0 DNA polymerase family B exonuclease domain, N-terminal HTH_3 PF01381.22 gi|16082345|ref|NP_394819.1| - 5.1e-08 32.9 0.5 3.3e-07 30.2 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix HTH_19 PF12844.7 gi|16082345|ref|NP_394819.1| - 2.7e-06 27.3 1.1 0.00025 21.0 0.0 3.6 4 0 0 4 4 4 1 Helix-turn-helix domain z-alpha PF02295.17 gi|16082345|ref|NP_394819.1| - 0.083 12.9 0.0 0.22 11.6 0.0 1.7 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain PTS_EIIA_2 PF00359.22 gi|16082345|ref|NP_394819.1| - 0.2 11.6 2.4 0.44 10.4 0.5 2.4 2 1 0 2 2 2 0 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FtsJ PF01728.19 gi|16082347|ref|NP_394821.1| - 1e-46 159.3 0.0 1.2e-46 159.1 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_23 PF13489.6 gi|16082347|ref|NP_394821.1| - 6.5e-05 22.8 0.0 9.4e-05 22.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|16082347|ref|NP_394821.1| - 0.01 16.5 0.3 0.049 14.3 0.3 2.2 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16082347|ref|NP_394821.1| - 0.074 13.7 0.1 0.19 12.4 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain GCV_H PF01597.19 gi|16082616|ref|NP_394822.1| - 2.3e-35 121.1 0.7 2.5e-35 121.0 0.7 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|16082616|ref|NP_394822.1| - 3.4e-05 23.6 0.4 7.2e-05 22.5 0.3 1.7 2 0 0 2 2 2 1 Biotin-requiring enzyme RnfC_N PF13375.6 gi|16082616|ref|NP_394822.1| - 0.00068 19.5 0.1 0.0009 19.2 0.1 1.2 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 gi|16082616|ref|NP_394822.1| - 0.041 13.7 0.2 0.48 10.3 0.1 2.2 1 1 1 2 2 2 0 Biotin-lipoyl like Adenylsucc_synt PF00709.21 gi|16082617|ref|NP_394823.1| - 4.7e-148 493.6 0.1 5.4e-148 493.4 0.1 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase DUF1474 PF07342.11 gi|16082617|ref|NP_394823.1| - 0.073 13.6 0.2 0.073 13.6 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1474) AhpC-TSA PF00578.21 gi|16082618|ref|NP_394824.1| - 5.4e-41 139.4 0.0 6.4e-41 139.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|16082618|ref|NP_394824.1| - 5.6e-27 94.3 0.2 6.5e-27 94.1 0.2 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|16082618|ref|NP_394824.1| - 0.00025 21.1 0.0 0.0022 18.1 0.0 2.0 1 1 1 2 2 2 1 AhpC/TSA antioxidant enzyme SCO1-SenC PF02630.14 gi|16082618|ref|NP_394824.1| - 0.00027 20.9 0.0 0.00034 20.5 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC DUF899 PF05988.12 gi|16082618|ref|NP_394824.1| - 0.055 13.0 0.0 0.067 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Nitro_FeMo-Co PF02579.17 gi|16082348|ref|NP_394825.1| - 7.8e-19 67.8 0.0 9.8e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor SLAC1 PF03595.17 gi|16082349|ref|NP_394826.1| - 4.4e-27 95.2 42.9 5.3e-27 94.9 42.9 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Pyridox_ox_2 PF12900.7 gi|16082350|ref|NP_394827.1| - 1.1e-29 103.3 0.0 1.3e-29 103.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase MFS_1 PF07690.16 gi|16082351|ref|NP_394828.1| - 7.2e-25 87.6 46.8 7.2e-25 87.6 46.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16082351|ref|NP_394828.1| - 2.3e-09 36.6 12.6 2.3e-09 36.6 12.6 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter Peptidase_C54 PF03416.19 gi|16082351|ref|NP_394828.1| - 0.05 13.0 0.0 0.07 12.5 0.0 1.2 1 0 0 1 1 1 0 Peptidase family C54 UPF0767 PF15990.5 gi|16082351|ref|NP_394828.1| - 0.59 10.3 2.0 1.1 9.4 0.2 2.2 2 0 0 2 2 2 0 UPF0767 family DUF1659 PF07872.11 gi|16082352|ref|NP_394829.1| - 0.29 10.8 1.9 5 6.9 1.9 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1659) DUF309 PF03745.14 gi|16082353|ref|NP_394830.1| - 5.1e-16 58.1 2.4 6.9e-16 57.7 2.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF309) TPR_12 PF13424.6 gi|16082353|ref|NP_394830.1| - 0.00017 21.8 0.4 0.0047 17.2 0.0 2.2 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|16082353|ref|NP_394830.1| - 0.076 13.9 0.8 0.29 12.1 0.0 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 gi|16082353|ref|NP_394830.1| - 0.082 13.4 0.1 0.3 11.6 0.0 1.8 1 1 1 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|16082353|ref|NP_394830.1| - 0.092 13.0 0.1 10 6.4 0.0 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|16082353|ref|NP_394830.1| - 0.3 11.0 1.4 2.3 8.2 0.0 2.5 2 1 1 3 3 3 0 Tetratricopeptide repeat RNase_T PF00929.24 gi|16082354|ref|NP_394831.1| - 2.4e-12 47.7 0.0 2.9e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 gi|16082354|ref|NP_394831.1| - 6.6e-10 39.2 0.0 1.3e-09 38.3 0.0 1.4 1 1 0 1 1 1 1 3' exoribonuclease, RNase T-like RNase_H_2 PF13482.6 gi|16082354|ref|NP_394831.1| - 3.1e-05 24.0 0.0 0.00053 20.0 0.0 2.1 1 1 0 1 1 1 1 RNase_H superfamily MFS_1 PF07690.16 gi|16082355|ref|NP_394832.1| - 8.5e-16 57.8 36.0 5.1e-15 55.2 33.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily AA_permease PF00324.21 gi|16082356|ref|NP_394833.1| - 7.3e-24 84.2 61.0 1e-23 83.7 61.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|16082356|ref|NP_394833.1| - 2.7e-19 69.3 64.5 3.7e-19 68.9 64.5 1.2 1 0 0 1 1 1 1 Amino acid permease CD34_antigen PF06365.12 gi|16082356|ref|NP_394833.1| - 0.12 11.9 0.2 8.4 5.9 0.0 2.4 2 0 0 2 2 2 0 CD34/Podocalyxin family Sugar_tr PF00083.24 gi|16082357|ref|NP_394834.1| - 6.3e-50 170.3 23.5 8.2e-50 170.0 23.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16082357|ref|NP_394834.1| - 1.7e-31 109.5 44.1 7.2e-27 94.2 35.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|16082357|ref|NP_394834.1| - 5.7e-06 25.9 7.3 5.7e-06 25.9 7.3 2.6 1 1 2 3 3 3 1 Uncharacterised MFS-type transporter YbfB Nre_N PF04894.12 gi|16082358|ref|NP_394835.1| - 2.7e-97 325.9 0.0 3.4e-97 325.5 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|16082358|ref|NP_394835.1| - 2.5e-35 120.7 0.0 4.7e-35 119.8 0.0 1.5 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Radical_SAM PF04055.21 gi|16082359|ref|NP_394836.1| - 1.9e-13 51.1 0.0 4.4e-13 49.9 0.0 1.5 1 1 1 2 2 2 1 Radical SAM superfamily DUF1848 PF08902.11 gi|16082359|ref|NP_394836.1| - 0.0035 17.1 0.5 4.1 7.1 3.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1848) Acetyltransf_3 PF13302.7 gi|16082360|ref|NP_394837.1| - 2.4e-24 86.5 0.0 3.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|16082360|ref|NP_394837.1| - 1.3e-12 47.9 0.0 2e-12 47.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|16082360|ref|NP_394837.1| - 4.1e-08 33.5 0.1 5.1e-08 33.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|16082360|ref|NP_394837.1| - 0.0003 20.5 0.0 0.00098 18.8 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain MPTase-PolyVal PF18818.1 gi|16082361|ref|NP_394838.1| - 0.00053 20.0 0.7 0.001 19.1 0.7 1.4 1 0 0 1 1 1 1 Metallopeptidase superfamily domain DEC-1_N PF04625.13 gi|16082361|ref|NP_394838.1| - 0.0032 16.5 0.0 0.0042 16.1 0.0 1.1 1 0 0 1 1 1 1 DEC-1 protein, N-terminal region Aspzincin_M35 PF14521.6 gi|16082361|ref|NP_394838.1| - 0.25 11.9 0.5 0.55 10.8 0.2 1.6 1 1 1 2 2 2 0 Lysine-specific metallo-endopeptidase PNGaseA PF12222.8 gi|16082362|ref|NP_394839.1| - 1.3e-18 67.2 5.7 1.4e-16 60.4 5.7 2.6 1 1 0 1 1 1 1 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A B12-binding PF02310.19 gi|16082367|ref|NP_394844.1| - 0.036 14.1 0.0 0.06 13.4 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain Radical_SAM PF04055.21 gi|16082367|ref|NP_394844.1| - 0.11 12.9 0.6 0.35 11.2 0.6 1.9 1 1 0 1 1 1 0 Radical SAM superfamily Sugar_tr PF00083.24 gi|16082368|ref|NP_394845.1| - 7.7e-59 199.7 20.0 9.6e-59 199.4 20.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16082368|ref|NP_394845.1| - 2.8e-33 115.3 62.8 3.3e-29 101.9 33.9 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 gi|16082368|ref|NP_394845.1| - 0.25 9.7 11.5 0.11 10.9 5.4 2.1 1 1 1 2 2 2 0 Fungal trichothecene efflux pump (TRI12) SAF PF08666.12 gi|16082369|ref|NP_394846.1| - 1.5e-17 64.0 0.7 1.9e-17 63.7 0.7 1.1 1 0 0 1 1 1 1 SAF domain DUF2190 PF09956.9 gi|16082369|ref|NP_394846.1| - 0.0058 17.1 0.1 1.5 9.3 0.0 2.0 1 1 1 2 2 2 2 Uncharacterized conserved protein (DUF2190) MoaC PF01967.21 gi|16082369|ref|NP_394846.1| - 0.025 14.6 0.3 0.029 14.5 0.3 1.2 1 0 0 1 1 1 0 MoaC family SET PF00856.28 gi|16082369|ref|NP_394846.1| - 0.069 13.5 0.2 4.9 7.5 0.0 2.6 2 1 0 2 2 2 0 SET domain GD_AH_C PF04295.13 gi|16082370|ref|NP_394847.1| - 9.8e-133 442.7 3.0 1.1e-132 442.6 3.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus FCD PF07729.12 gi|16082371|ref|NP_394848.1| - 5.5e-26 91.4 0.3 7.7e-26 91.0 0.3 1.1 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 gi|16082371|ref|NP_394848.1| - 9.6e-13 47.6 0.0 1.7e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FadR_C PF07840.12 gi|16082371|ref|NP_394848.1| - 0.0037 17.2 1.9 0.018 15.0 1.9 1.9 1 1 0 1 1 1 1 FadR C-terminal domain Rx_N PF18052.1 gi|16082371|ref|NP_394848.1| - 0.022 15.0 0.3 0.06 13.6 0.3 1.7 1 0 0 1 1 1 0 Rx N-terminal domain DUF1128 PF06569.11 gi|16082371|ref|NP_394848.1| - 0.033 14.2 2.8 0.099 12.6 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1128) MR_MLE_C PF13378.6 gi|16082372|ref|NP_394849.1| - 1.8e-39 135.6 0.0 2.4e-39 135.1 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|16082372|ref|NP_394849.1| - 2.2e-06 27.8 0.0 3.8e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DUF2242 PF10001.9 gi|16082372|ref|NP_394849.1| - 0.015 15.5 0.0 0.029 14.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2242) PAPS_reduct PF01507.19 gi|16082373|ref|NP_394850.1| - 2.9e-11 43.7 0.0 1.1e-10 41.9 0.0 1.9 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|16082373|ref|NP_394850.1| - 0.0023 17.7 0.0 0.004 16.9 0.0 1.3 1 0 0 1 1 1 1 PP-loop family AAA_30 PF13604.6 gi|16082375|ref|NP_394852.1| - 4e-09 36.5 0.0 2.7e-08 33.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|16082375|ref|NP_394852.1| - 2.3e-08 34.5 0.0 4.2e-07 30.4 0.0 2.4 2 1 0 2 2 2 1 AAA domain ResIII PF04851.15 gi|16082375|ref|NP_394852.1| - 4.1e-08 33.4 0.0 7.7e-07 29.3 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_12 PF13087.6 gi|16082375|ref|NP_394852.1| - 6.9e-07 29.1 0.8 1.7e-06 27.8 0.8 1.7 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|16082375|ref|NP_394852.1| - 3.8e-06 26.9 0.3 0.00012 22.0 0.0 2.8 2 2 1 3 3 3 1 AAA domain DEAD PF00270.29 gi|16082375|ref|NP_394852.1| - 2.5e-05 24.1 0.0 5.8e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|16082375|ref|NP_394852.1| - 0.0017 18.6 0.0 0.0087 16.3 0.0 2.3 3 0 0 3 3 3 1 AAA domain DUF2075 PF09848.9 gi|16082375|ref|NP_394852.1| - 0.0036 16.6 0.0 0.0086 15.4 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.6 gi|16082375|ref|NP_394852.1| - 0.032 14.8 0.0 0.1 13.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|16082375|ref|NP_394852.1| - 0.056 13.8 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|16082375|ref|NP_394852.1| - 0.059 12.6 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA PF00004.29 gi|16082375|ref|NP_394852.1| - 0.085 13.3 0.0 0.34 11.4 0.0 2.0 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|16082375|ref|NP_394852.1| - 0.089 12.8 0.2 1.2 9.2 0.0 2.9 2 1 1 3 3 3 0 AAA domain T2SSE PF00437.20 gi|16082375|ref|NP_394852.1| - 0.14 11.2 0.0 0.3 10.1 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein PDDEXK_1 PF12705.7 gi|16082376|ref|NP_394853.1| - 6.2e-07 29.6 0.3 1.3e-06 28.5 0.0 1.5 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily VRR_NUC PF08774.11 gi|16082376|ref|NP_394853.1| - 0.0024 17.9 0.0 0.011 15.8 0.0 2.0 1 1 1 2 2 2 1 VRR-NUC domain CIDR1_gamma PF18562.1 gi|16082376|ref|NP_394853.1| - 0.14 12.3 1.5 0.36 11.0 0.1 2.4 2 0 0 2 2 2 0 Cysteine-Rich Interdomain Region 1 gamma Bacteriocin_IId PF09221.10 gi|16082377|ref|NP_394854.1| - 0.35 11.1 4.3 0.77 10.0 0.1 2.2 2 0 0 2 2 2 0 Bacteriocin class IId cyclical uberolysin-like zinc_ribbon_2 PF13240.6 gi|16082378|ref|NP_394855.1| - 0.00018 21.1 4.9 0.0003 20.4 4.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain HTH_34 PF13601.6 gi|16082378|ref|NP_394855.1| - 0.00032 20.8 0.0 0.00054 20.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain DZR PF12773.7 gi|16082378|ref|NP_394855.1| - 0.00059 19.8 0.5 0.001 19.0 0.5 1.4 1 0 0 1 1 1 1 Double zinc ribbon HxlR PF01638.17 gi|16082378|ref|NP_394855.1| - 0.013 15.3 0.1 0.022 14.6 0.1 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix zinc_ribbon_15 PF17032.5 gi|16082378|ref|NP_394855.1| - 0.013 16.2 1.8 0.024 15.4 1.8 1.5 1 0 0 1 1 1 0 zinc-ribbon family HTH_45 PF14947.6 gi|16082378|ref|NP_394855.1| - 0.086 12.8 0.1 0.28 11.2 0.0 1.9 1 1 1 2 2 2 0 Winged helix-turn-helix zf-ribbon_3 PF13248.6 gi|16082378|ref|NP_394855.1| - 0.11 11.9 3.9 0.27 10.7 3.9 1.7 1 1 0 1 1 1 0 zinc-ribbon domain Replic_Relax PF13814.6 gi|16082378|ref|NP_394855.1| - 0.12 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation PriA_CRR PF18319.1 gi|16082378|ref|NP_394855.1| - 0.26 11.3 4.4 0.15 12.1 0.9 2.1 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Nudix_N_2 PF14803.6 gi|16082378|ref|NP_394855.1| - 1.3 9.0 4.3 0.37 10.7 0.5 2.0 2 0 0 2 2 2 0 Nudix N-terminal Esterase PF00756.20 gi|16082379|ref|NP_394856.1| - 2.9e-14 53.4 0.0 1.1e-12 48.1 0.0 2.8 1 1 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 gi|16082379|ref|NP_394856.1| - 0.11 11.7 0.0 0.22 10.7 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Thermopsin PF05317.11 gi|16082380|ref|NP_394857.1| - 1.2e-76 257.6 18.5 1.2e-76 257.6 18.5 2.3 3 0 0 3 3 3 1 Thermopsin CarboxypepD_reg PF13620.6 gi|16082380|ref|NP_394857.1| - 0.0047 17.2 0.2 0.085 13.1 0.0 2.9 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain AAA_5 PF07728.14 gi|16082380|ref|NP_394857.1| - 0.17 11.8 0.0 0.35 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MFS_1 PF07690.16 gi|16082381|ref|NP_394858.1| - 7.3e-48 163.3 65.4 2.5e-36 125.3 28.4 2.3 1 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|16082381|ref|NP_394858.1| - 2.5e-09 36.5 14.3 2.5e-09 36.5 14.3 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|16082381|ref|NP_394858.1| - 1.7e-08 33.8 20.8 1.8e-05 23.8 11.3 2.6 2 1 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 gi|16082381|ref|NP_394858.1| - 5e-05 22.0 44.7 0.00015 20.5 10.6 3.0 3 2 0 3 3 3 2 MFS/sugar transport protein DUF697 PF05128.12 gi|16082381|ref|NP_394858.1| - 0.027 14.2 0.0 0.054 13.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF697) CrgA PF06781.12 gi|16082381|ref|NP_394858.1| - 4.2 7.5 11.7 0.46 10.6 0.8 3.7 3 1 0 3 3 3 0 Cell division protein CrgA Sugar_tr PF00083.24 gi|16082382|ref|NP_394859.1| - 2.9e-40 138.5 23.5 8e-40 137.0 23.5 2.2 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|16082382|ref|NP_394859.1| - 1.5e-36 126.1 48.4 2.2e-25 89.3 15.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DAD PF02109.16 gi|16082382|ref|NP_394859.1| - 0.082 13.2 1.0 0.24 11.7 0.1 2.2 1 1 0 2 2 2 0 DAD family DUF1673 PF07895.11 gi|16082382|ref|NP_394859.1| - 1.5 8.5 4.7 13 5.4 1.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) MFS_1 PF07690.16 gi|16082619|ref|NP_394860.1| - 4.1e-25 88.4 89.5 9.2e-23 80.7 49.5 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|16082619|ref|NP_394860.1| - 0.14 11.4 28.5 0.23 10.7 28.5 1.3 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Arch_flagellin PF01917.16 gi|16082620|ref|NP_394861.1| - 5.8e-42 143.7 11.0 6.9e-42 143.4 11.0 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Pilin_N PF07790.11 gi|16082620|ref|NP_394861.1| - 2.6 9.0 9.0 12 6.8 9.0 2.1 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal ChiW_Ig_like PF18683.1 gi|16082620|ref|NP_394861.1| - 4.1 7.7 8.7 4.3 7.6 0.4 2.8 3 0 0 3 3 3 0 Chitinase W immunoglobulin-like domain HTH_28 PF13518.6 gi|16082383|ref|NP_394862.1| - 8.9e-05 22.5 0.2 0.0016 18.5 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_21 PF13276.6 gi|16082383|ref|NP_394862.1| - 0.00017 21.6 1.3 0.00024 21.2 0.4 1.6 2 0 0 2 2 2 1 HTH-like domain HTH_23 PF13384.6 gi|16082383|ref|NP_394862.1| - 0.00055 19.6 0.1 0.0035 17.1 0.0 2.2 2 1 1 3 3 3 1 Homeodomain-like domain CENP-B_N PF04218.13 gi|16082383|ref|NP_394862.1| - 0.0058 16.2 0.0 0.017 14.7 0.0 1.8 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain ToxN_toxin PF13958.6 gi|16082383|ref|NP_394862.1| - 0.0063 16.8 1.4 0.0097 16.2 0.5 1.7 1 1 1 2 2 2 1 Toxin ToxN, type III toxin-antitoxin system HTH_17 PF12728.7 gi|16082383|ref|NP_394862.1| - 0.012 15.8 0.6 6.2 7.1 0.4 2.5 2 1 0 2 2 2 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|16082383|ref|NP_394862.1| - 0.028 13.9 0.1 0.072 12.6 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 Mor PF08765.11 gi|16082383|ref|NP_394862.1| - 0.033 14.2 0.4 0.13 12.2 0.0 2.1 2 1 0 2 2 2 0 Mor transcription activator family IF2_N PF04760.15 gi|16082383|ref|NP_394862.1| - 0.058 13.2 0.6 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_29 PF13551.6 gi|16082383|ref|NP_394862.1| - 0.11 12.6 0.0 0.3 11.1 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix HTH_3 PF01381.22 gi|16082383|ref|NP_394862.1| - 0.13 12.4 0.0 0.53 10.4 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix NTP_transf_3 PF12804.7 gi|16082621|ref|NP_394863.1| - 5.7e-12 46.3 0.0 6.8e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain ABC_tran PF00005.27 gi|16082384|ref|NP_394864.1| - 4.6e-26 92.0 0.0 7.2e-26 91.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|16082384|ref|NP_394864.1| - 2.1e-10 40.4 0.3 8.1e-06 25.4 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|16082384|ref|NP_394864.1| - 2.5e-10 40.7 0.0 0.00034 20.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|16082384|ref|NP_394864.1| - 0.0001 22.2 0.0 0.00022 21.0 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|16082384|ref|NP_394864.1| - 0.0003 20.8 0.0 0.092 12.8 0.0 2.4 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.6 gi|16082384|ref|NP_394864.1| - 0.00045 20.8 0.6 0.0008 20.0 0.6 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|16082384|ref|NP_394864.1| - 0.0093 15.7 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|16082384|ref|NP_394864.1| - 0.016 13.9 0.8 1.9 7.0 0.1 2.1 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|16082384|ref|NP_394864.1| - 0.022 15.0 0.1 0.062 13.5 0.1 1.8 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Zeta_toxin PF06414.12 gi|16082384|ref|NP_394864.1| - 0.031 13.6 0.0 0.064 12.5 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_18 PF13238.6 gi|16082384|ref|NP_394864.1| - 0.048 14.2 0.1 4.2 7.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|16082384|ref|NP_394864.1| - 0.081 12.6 0.1 0.12 12.1 0.1 1.4 1 1 0 1 1 1 0 AAA domain OsmC PF02566.19 gi|16082622|ref|NP_394865.1| - 2.8e-14 53.4 0.0 4e-14 52.9 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein DUF1641 PF07849.11 gi|16082385|ref|NP_394866.1| - 1.9e-09 37.2 0.1 1.9e-09 37.2 0.1 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) Pyr_redox_2 PF07992.14 gi|16082386|ref|NP_394867.1| - 3.5e-21 75.7 0.0 7.1e-21 74.7 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082386|ref|NP_394867.1| - 0.0021 18.6 0.0 0.58 10.8 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|16082386|ref|NP_394867.1| - 0.007 16.4 0.0 3.7 7.5 0.0 2.4 2 0 0 2 2 2 2 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|16082386|ref|NP_394867.1| - 0.064 12.1 0.0 0.7 8.7 0.0 2.2 2 0 0 2 2 2 0 Tryptophan halogenase TusA PF01206.17 gi|16082387|ref|NP_394868.1| - 9.1e-21 73.5 0.0 1e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 gi|16082388|ref|NP_394869.1| - 2.2e-18 66.6 4.7 1.6e-15 57.3 4.7 2.0 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|16082388|ref|NP_394869.1| - 0.0056 17.0 0.1 0.0079 16.6 0.1 1.4 1 1 0 1 1 1 1 DsrE/DsrF-like family EF_assoc_1 PF08355.12 gi|16082388|ref|NP_394869.1| - 0.12 12.0 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 EF hand associated RNA_pol_L_2 PF13656.6 gi|16082389|ref|NP_394870.1| - 1.7e-14 53.3 0.0 2.5e-14 52.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain UPF0020 PF01170.18 gi|16082390|ref|NP_394871.1| - 1.8e-27 96.3 0.0 1.3e-26 93.5 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|16082390|ref|NP_394871.1| - 3e-06 27.8 0.0 7.3e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|16082390|ref|NP_394871.1| - 6.4e-06 26.0 0.0 1.1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|16082390|ref|NP_394871.1| - 0.00016 22.3 0.0 0.00059 20.4 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|16082390|ref|NP_394871.1| - 0.00017 21.4 0.0 0.0014 18.4 0.0 2.0 2 0 0 2 2 2 1 DNA methylase Methyltransf_15 PF09445.10 gi|16082390|ref|NP_394871.1| - 0.00017 21.2 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|16082390|ref|NP_394871.1| - 0.0012 18.5 0.1 0.016 14.9 0.0 2.1 1 1 1 2 2 2 1 Conserved hypothetical protein 95 N6_Mtase PF02384.16 gi|16082390|ref|NP_394871.1| - 0.0058 15.9 0.0 0.011 15.1 0.0 1.4 1 1 0 1 1 1 1 N-6 DNA Methylase AviRa PF11599.8 gi|16082390|ref|NP_394871.1| - 0.025 14.1 0.0 0.79 9.1 0.0 2.1 1 1 1 2 2 2 0 RRNA methyltransferase AviRa MTS PF05175.14 gi|16082390|ref|NP_394871.1| - 0.035 13.6 0.0 0.057 13.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain MethyltransfD12 PF02086.15 gi|16082390|ref|NP_394871.1| - 0.05 13.3 0.0 0.087 12.5 0.0 1.4 1 1 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase FbpA PF05833.11 gi|16082623|ref|NP_394872.1| - 1e-41 143.2 0.2 1.6e-41 142.5 0.2 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|16082623|ref|NP_394872.1| - 1.4e-27 96.5 0.0 3e-27 95.4 0.0 1.6 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|16082623|ref|NP_394872.1| - 0.0089 16.2 0.0 0.026 14.7 0.0 1.8 1 0 0 1 1 1 1 NFACT protein RNA binding domain IpaC_SipC PF09599.10 gi|16082623|ref|NP_394872.1| - 0.027 14.0 0.3 0.046 13.3 0.3 1.2 1 0 0 1 1 1 0 Salmonella-Shigella invasin protein C (IpaC_SipC) bact-PGI_C PF10432.9 gi|16082391|ref|NP_394873.1| - 8.8e-44 149.2 0.0 1.5e-43 148.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal SIS domain SIS PF01380.22 gi|16082391|ref|NP_394873.1| - 9.6e-06 25.5 0.0 3.1e-05 23.8 0.1 1.8 2 0 0 2 2 2 1 SIS domain SIS_2 PF13580.6 gi|16082391|ref|NP_394873.1| - 0.0022 18.0 0.1 0.012 15.7 0.1 2.1 2 0 0 2 2 2 1 SIS domain LigB PF02900.18 gi|16082392|ref|NP_394874.1| - 1.5e-08 34.0 0.0 1.7e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Chordopox_A13L PF05961.11 gi|16082393|ref|NP_394875.1| - 0.042 14.1 0.0 0.07 13.4 0.0 1.4 1 0 0 1 1 1 0 Chordopoxvirus A13L protein DUF1947 PF09183.10 gi|16082395|ref|NP_394877.1| - 3.1e-22 78.6 0.0 5.2e-22 77.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) PUA PF01472.20 gi|16082395|ref|NP_394877.1| - 2e-21 75.7 0.1 2.8e-21 75.3 0.1 1.2 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|16082395|ref|NP_394877.1| - 0.00016 21.9 0.0 0.00039 20.6 0.0 1.6 2 0 0 2 2 2 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|16082395|ref|NP_394877.1| - 0.005 17.5 0.0 0.0085 16.8 0.0 1.4 1 0 0 1 1 1 1 Pre-PUA-like domain PUA_3 PF17785.1 gi|16082395|ref|NP_394877.1| - 0.0054 16.5 0.0 0.02 14.7 0.0 2.0 3 0 0 3 3 3 1 PUA-like domain Peptidase_S24 PF00717.23 gi|16082395|ref|NP_394877.1| - 0.022 14.7 0.1 0.053 13.5 0.1 1.7 1 0 0 1 1 1 0 Peptidase S24-like COX6C PF02937.15 gi|16082396|ref|NP_394878.1| - 0.13 12.4 1.4 0.66 10.1 0.0 2.6 2 1 1 3 3 3 0 Cytochrome c oxidase subunit VIc Spt5-NGN PF03439.13 gi|16082397|ref|NP_394879.1| - 2.3e-17 62.6 0.0 5.2e-17 61.5 0.0 1.6 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|16082397|ref|NP_394879.1| - 4.3e-05 23.3 0.3 0.00015 21.6 0.0 2.0 2 0 0 2 2 2 1 KOW motif DUF916 PF06030.12 gi|16082397|ref|NP_394879.1| - 0.0041 17.2 0.1 0.0041 17.2 0.1 2.2 3 0 0 3 3 3 1 Bacterial protein of unknown function (DUF916) SecE PF00584.20 gi|16082624|ref|NP_394880.1| - 2.5e-06 27.3 0.2 3.9e-06 26.7 0.2 1.3 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex FBPase_3 PF01950.16 gi|16082398|ref|NP_394881.1| - 1.9e-179 596.5 0.0 2.1e-179 596.3 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Thy1 PF02511.15 gi|16082625|ref|NP_394882.1| - 1e-43 149.3 1.4 3.7e-21 75.8 0.8 2.1 2 0 0 2 2 2 2 Thymidylate synthase complementing protein AmpE PF17113.5 gi|16082625|ref|NP_394882.1| - 0.21 10.9 0.0 0.33 10.3 0.0 1.2 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE TrmB PF01978.19 gi|16082668|ref|NP_394883.1| - 2.6e-06 27.2 0.3 2.5e-05 24.0 0.3 1.9 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|16082668|ref|NP_394883.1| - 0.0018 18.1 0.0 0.0022 17.9 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|16082668|ref|NP_394883.1| - 0.0065 16.4 0.1 0.0083 16.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|16082668|ref|NP_394883.1| - 0.0076 15.9 0.0 0.0084 15.7 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|16082668|ref|NP_394883.1| - 0.012 16.0 0.1 0.012 15.9 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator HTH_46 PF15977.5 gi|16082668|ref|NP_394883.1| - 0.012 15.6 0.0 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding z-alpha PF02295.17 gi|16082668|ref|NP_394883.1| - 0.012 15.6 0.8 0.019 15.0 0.8 1.3 1 1 0 1 1 1 0 Adenosine deaminase z-alpha domain FAD_binding_7 PF03441.14 gi|16082668|ref|NP_394883.1| - 0.017 14.6 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain of DNA photolyase HTH_IclR PF09339.10 gi|16082668|ref|NP_394883.1| - 0.023 14.5 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|16082668|ref|NP_394883.1| - 0.027 15.0 0.1 0.03 14.8 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain MAGE PF01454.19 gi|16082668|ref|NP_394883.1| - 0.034 13.9 0.1 0.04 13.6 0.1 1.1 1 0 0 1 1 1 0 MAGE family Penicillinase_R PF03965.16 gi|16082668|ref|NP_394883.1| - 0.045 14.1 0.1 0.048 14.0 0.1 1.1 1 0 0 1 1 1 0 Penicillinase repressor Thioredoxin_15 PF18403.1 gi|16082668|ref|NP_394883.1| - 0.049 13.5 0.3 0.07 13.0 0.2 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain LexA_DNA_bind PF01726.16 gi|16082668|ref|NP_394883.1| - 0.059 13.2 0.1 0.096 12.5 0.1 1.5 1 1 0 1 1 1 0 LexA DNA binding domain HTH_6 PF01418.17 gi|16082668|ref|NP_394883.1| - 0.06 13.3 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family MarR PF01047.22 gi|16082668|ref|NP_394883.1| - 0.067 13.1 0.1 0.086 12.8 0.1 1.2 1 0 0 1 1 1 0 MarR family Replic_Relax PF13814.6 gi|16082668|ref|NP_394883.1| - 0.067 13.3 0.0 0.07 13.2 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation HTH_45 PF14947.6 gi|16082668|ref|NP_394883.1| - 0.069 13.1 0.1 0.095 12.7 0.1 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix HTH_41 PF14502.6 gi|16082668|ref|NP_394883.1| - 0.088 12.5 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DprA_WH PF17782.1 gi|16082668|ref|NP_394883.1| - 0.14 12.3 0.0 0.2 11.8 0.0 1.3 1 1 0 1 1 1 0 DprA winged helix domain DUF373 PF04123.13 gi|16082399|ref|NP_394884.1| - 3.5e-101 339.0 17.0 4.3e-101 338.7 17.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF373) MAF_flag10 PF01973.18 gi|16082400|ref|NP_394885.1| - 9.3e-14 51.5 0.1 1.3e-13 51.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 2-ph_phosp PF04029.14 gi|16082401|ref|NP_394886.1| - 2.6e-41 141.3 0.0 2.2e-39 135.0 0.0 2.0 1 1 0 1 1 1 1 2-phosphosulpholactate phosphatase TrkA_N PF02254.18 gi|16082402|ref|NP_394887.1| - 2e-15 57.0 0.2 3.1e-15 56.5 0.2 1.2 1 0 0 1 1 1 1 TrkA-N domain Ion_trans_2 PF07885.16 gi|16082402|ref|NP_394887.1| - 5.1e-10 39.2 8.5 5.1e-10 39.2 8.5 2.6 2 1 0 2 2 2 1 Ion channel Ion_trans PF00520.31 gi|16082402|ref|NP_394887.1| - 0.00083 18.6 17.4 0.0025 17.1 17.0 2.0 1 1 0 1 1 1 1 Ion transport protein DUF4191 PF13829.6 gi|16082402|ref|NP_394887.1| - 0.019 14.3 2.2 0.049 13.0 2.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Trep_Strep PF09605.10 gi|16082402|ref|NP_394887.1| - 3.1 7.7 17.0 5.4 7.0 16.8 1.6 1 1 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) Cob_adeno_trans PF01923.18 gi|16082403|ref|NP_394888.1| - 1.8e-45 155.0 0.1 2.1e-45 154.8 0.1 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Pyr_redox_2 PF07992.14 gi|16082404|ref|NP_394889.1| - 2.1e-64 217.6 1.5 2.7e-64 217.2 1.5 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082404|ref|NP_394889.1| - 5.4e-21 74.9 4.6 6.3e-19 68.3 0.5 3.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|16082404|ref|NP_394889.1| - 3.7e-16 59.4 0.1 1.2e-15 57.7 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|16082404|ref|NP_394889.1| - 5.6e-15 55.4 5.6 1.2e-10 41.1 0.3 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|16082404|ref|NP_394889.1| - 1.4e-09 37.2 9.0 0.0001 21.2 0.1 4.1 3 1 1 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.6 gi|16082404|ref|NP_394889.1| - 1.7e-09 37.8 1.0 3.1e-05 24.1 0.1 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|16082404|ref|NP_394889.1| - 5e-08 32.4 5.3 1.3e-05 24.5 0.4 3.3 3 0 0 3 3 3 1 FAD binding domain GIDA PF01134.22 gi|16082404|ref|NP_394889.1| - 7.3e-07 28.6 6.0 0.00027 20.1 0.0 3.5 3 1 1 4 4 4 2 Glucose inhibited division protein A DAO PF01266.24 gi|16082404|ref|NP_394889.1| - 2.8e-05 23.9 14.4 0.029 13.9 0.2 3.6 3 1 1 4 4 4 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|16082404|ref|NP_394889.1| - 4.6e-05 22.8 1.4 0.013 14.8 0.0 2.6 2 1 0 2 2 2 2 Thi4 family FAD_oxidored PF12831.7 gi|16082404|ref|NP_394889.1| - 7.2e-05 22.3 2.1 0.0004 19.8 0.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|16082404|ref|NP_394889.1| - 0.00017 21.3 1.3 0.0012 18.4 0.2 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|16082404|ref|NP_394889.1| - 0.0011 19.2 0.9 0.66 10.2 0.1 2.5 2 0 0 2 2 2 2 TrkA-N domain FAD_binding_3 PF01494.19 gi|16082404|ref|NP_394889.1| - 0.0012 18.2 5.1 0.11 11.8 0.1 2.4 2 1 0 2 2 2 2 FAD binding domain 3HCDH_N PF02737.18 gi|16082404|ref|NP_394889.1| - 0.0051 16.7 0.3 0.0097 15.8 0.3 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 gi|16082404|ref|NP_394889.1| - 0.0052 16.0 0.1 0.14 11.2 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|16082404|ref|NP_394889.1| - 0.015 15.3 7.1 0.78 9.7 0.0 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|16082404|ref|NP_394889.1| - 0.022 13.6 0.9 0.093 11.6 0.0 2.3 3 0 0 3 3 3 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|16082404|ref|NP_394889.1| - 0.027 13.5 4.7 3.5 6.6 0.0 3.0 2 1 1 3 3 3 0 Lycopene cyclase protein Amino_oxidase PF01593.24 gi|16082404|ref|NP_394889.1| - 0.04 13.2 0.0 0.093 12.0 0.0 1.6 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.6 gi|16082404|ref|NP_394889.1| - 0.045 14.2 0.2 3.8 8.0 0.0 2.5 2 1 0 2 2 2 0 Putative NAD(P)-binding CHB_HEX_C PF03174.13 gi|16082404|ref|NP_394889.1| - 0.14 12.2 0.0 0.66 10.0 0.0 2.0 2 0 0 2 2 2 0 Chitobiase/beta-hexosaminidase C-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|16082404|ref|NP_394889.1| - 0.14 12.1 0.1 18 5.3 0.0 2.6 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-oxoacid_dh PF00198.23 gi|16082405|ref|NP_394890.1| - 1.2e-70 237.6 0.1 1.8e-70 237.1 0.1 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 gi|16082405|ref|NP_394890.1| - 7.8e-22 76.9 2.9 1.6e-21 75.9 2.1 2.0 2 0 0 2 2 2 1 Biotin-requiring enzyme E3_binding PF02817.17 gi|16082405|ref|NP_394890.1| - 3.2e-16 59.4 0.7 2.3e-15 56.6 0.6 2.3 2 0 0 2 2 2 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 gi|16082405|ref|NP_394890.1| - 1.9e-10 40.4 2.1 2e-05 24.3 0.3 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|16082405|ref|NP_394890.1| - 1.1e-05 26.0 5.3 0.009 16.7 0.1 3.7 2 2 2 4 4 4 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|16082405|ref|NP_394890.1| - 0.0085 15.3 0.3 0.71 9.0 0.0 2.5 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|16082405|ref|NP_394890.1| - 0.031 14.2 1.4 0.064 13.2 0.2 2.1 2 0 0 2 2 2 0 Glycine cleavage H-protein PTS_EIIA_1 PF00358.20 gi|16082405|ref|NP_394890.1| - 0.065 13.0 0.6 2.5 7.9 0.1 2.9 2 1 1 3 3 3 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Transket_pyr PF02779.24 gi|16082406|ref|NP_394891.1| - 2.6e-49 167.3 0.0 4e-49 166.7 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|16082406|ref|NP_394891.1| - 3.5e-37 127.1 0.0 5.4e-37 126.4 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain E1_dh PF00676.20 gi|16082407|ref|NP_394892.1| - 1.4e-83 280.3 0.0 1.6e-83 280.1 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|16082407|ref|NP_394892.1| - 1.9e-06 27.8 0.6 0.00028 20.7 0.2 3.1 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|16082407|ref|NP_394892.1| - 0.0054 16.0 0.0 0.0095 15.2 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Peptidase_M24 PF00557.24 gi|16082408|ref|NP_394893.1| - 2.9e-41 141.5 0.0 3.4e-41 141.2 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3834 PF12916.7 gi|16082409|ref|NP_394894.1| - 3.4e-56 189.7 1.3 3.9e-56 189.5 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) PAC2 PF09754.9 gi|16082410|ref|NP_394895.1| - 5.3e-36 124.6 0.1 6.3e-36 124.4 0.1 1.0 1 0 0 1 1 1 1 PAC2 family AAA_23 PF13476.6 gi|16082410|ref|NP_394895.1| - 0.019 15.4 0.1 0.024 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain Tropomyosin_1 PF12718.7 gi|16082410|ref|NP_394895.1| - 0.035 14.3 3.2 0.035 14.3 3.2 1.5 2 0 0 2 2 2 0 Tropomyosin like E2F_CC-MB PF16421.5 gi|16082410|ref|NP_394895.1| - 0.038 14.4 2.4 0.067 13.5 2.4 1.5 1 0 0 1 1 1 0 E2F transcription factor CC-MB domain DUF5320 PF17253.2 gi|16082410|ref|NP_394895.1| - 0.069 14.2 0.0 0.11 13.6 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Csm1_N PF18504.1 gi|16082410|ref|NP_394895.1| - 0.07 13.5 4.0 0.14 12.5 4.0 1.4 1 0 0 1 1 1 0 Csm1 N-terminal domain DUF16 PF01519.16 gi|16082410|ref|NP_394895.1| - 0.084 13.4 3.1 0.17 12.3 3.1 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF16 ZapB PF06005.12 gi|16082410|ref|NP_394895.1| - 0.089 13.2 7.2 0.15 12.5 7.2 1.3 1 0 0 1 1 1 0 Cell division protein ZapB BLYB PF05289.11 gi|16082410|ref|NP_394895.1| - 0.1 12.8 2.7 0.19 12.0 2.7 1.4 1 0 0 1 1 1 0 Borrelia hemolysin accessory protein Methyltransf_18 PF12847.7 gi|16082410|ref|NP_394895.1| - 0.17 11.8 2.1 1.3 8.9 0.2 2.7 2 1 1 3 3 3 0 Methyltransferase domain FlxA PF14282.6 gi|16082410|ref|NP_394895.1| - 0.18 11.8 5.7 0.34 10.9 5.7 1.4 1 0 0 1 1 1 0 FlxA-like protein SseC PF04888.12 gi|16082410|ref|NP_394895.1| - 0.53 9.8 3.5 0.97 9.0 3.5 1.4 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family M16C_assoc PF08367.11 gi|16082410|ref|NP_394895.1| - 1.5 7.9 6.2 2.1 7.4 6.2 1.2 1 0 0 1 1 1 0 Peptidase M16C associated DUF349 PF03993.12 gi|16082410|ref|NP_394895.1| - 2.6 8.4 6.3 4.5 7.6 6.3 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) Prefoldin_2 PF01920.20 gi|16082410|ref|NP_394895.1| - 4.9 7.2 12.6 0.4 10.6 8.0 1.5 2 0 0 2 2 2 0 Prefoldin subunit IFP_35_N PF07334.13 gi|16082410|ref|NP_394895.1| - 8.6 6.5 9.9 39 4.4 5.8 2.6 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus ThiS PF02597.20 gi|16082411|ref|NP_394896.1| - 6.6e-07 29.9 0.1 7.6e-07 29.7 0.1 1.0 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 gi|16082411|ref|NP_394896.1| - 0.0036 17.3 0.2 0.0054 16.7 0.2 1.3 1 0 0 1 1 1 1 ThiS-like ubiquitin Ub-Mut7C PF14451.6 gi|16082411|ref|NP_394896.1| - 0.11 12.4 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Mut7-C ubiquitin DUF302 PF03625.14 gi|16082411|ref|NP_394896.1| - 0.15 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF302 MarR_2 PF12802.7 gi|16082412|ref|NP_394897.1| - 0.0013 18.6 0.3 0.91 9.5 0.1 2.5 3 0 0 3 3 3 2 MarR family TrmB PF01978.19 gi|16082412|ref|NP_394897.1| - 0.0038 17.1 0.3 2.1 8.3 0.1 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|16082412|ref|NP_394897.1| - 0.018 14.9 0.1 0.1 12.5 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Flavin_Reduct PF01613.18 gi|16082413|ref|NP_394898.1| - 1.6e-18 67.3 0.0 1.9e-18 67.0 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain Putative_PNPOx PF01243.20 gi|16082413|ref|NP_394898.1| - 0.00012 22.2 0.0 0.00021 21.4 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|16082413|ref|NP_394898.1| - 0.0021 17.8 0.0 0.0068 16.2 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF447) NAD_binding_10 PF13460.6 gi|16082414|ref|NP_394899.1| - 3.3e-06 27.1 0.0 4.2e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|16082414|ref|NP_394899.1| - 0.00047 19.7 0.0 0.0059 16.1 0.0 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|16082414|ref|NP_394899.1| - 0.022 13.8 0.0 0.029 13.4 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family tRNA_NucTransf2 PF09249.11 gi|16082415|ref|NP_394900.1| - 2.1e-38 131.0 0.0 5.1e-38 129.8 0.0 1.7 2 0 0 2 2 2 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|16082415|ref|NP_394900.1| - 2.6e-21 75.7 0.0 7.1e-21 74.3 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|16082415|ref|NP_394900.1| - 0.00024 21.3 0.0 0.0013 18.9 0.0 2.0 1 1 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Polbeta PF18765.1 gi|16082415|ref|NP_394900.1| - 0.00089 19.3 0.0 0.0025 17.8 0.0 1.8 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NAC PF01849.18 gi|16082416|ref|NP_394901.1| - 3.1e-13 49.5 3.1 1.1e-12 47.7 2.4 1.9 2 0 0 2 2 2 1 NAC domain SPT6_acidic PF14632.6 gi|16082416|ref|NP_394901.1| - 0.04 14.5 0.3 0.051 14.1 0.3 1.3 1 0 0 1 1 1 0 Acidic N-terminal SPT6 Fer4 PF00037.27 gi|16082626|ref|NP_394902.1| - 6.8e-12 44.7 19.9 3.5e-07 29.8 3.3 2.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|16082626|ref|NP_394902.1| - 7.1e-07 29.7 20.8 1e-05 26.0 12.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|16082626|ref|NP_394902.1| - 1.7e-06 28.1 9.7 0.00028 21.0 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082626|ref|NP_394902.1| - 2.3e-06 27.6 12.0 2.6e-05 24.2 12.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082626|ref|NP_394902.1| - 1.2e-05 25.4 10.9 0.0001 22.4 11.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|16082626|ref|NP_394902.1| - 0.00026 21.7 16.5 0.0086 17.0 4.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|16082626|ref|NP_394902.1| - 0.00027 21.3 10.5 0.0013 19.1 10.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|16082626|ref|NP_394902.1| - 0.00044 20.7 8.5 0.022 15.3 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 gi|16082626|ref|NP_394902.1| - 0.00066 19.6 19.2 0.1 12.7 7.2 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|16082626|ref|NP_394902.1| - 0.0012 19.8 23.1 0.0079 17.1 12.8 2.1 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|16082626|ref|NP_394902.1| - 0.016 15.8 10.8 0.095 13.3 11.6 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|16082626|ref|NP_394902.1| - 0.071 13.7 14.2 0.59 10.8 5.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|16082626|ref|NP_394902.1| - 0.087 13.6 0.4 0.087 13.6 0.4 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|16082626|ref|NP_394902.1| - 0.14 12.4 11.4 0.083 13.1 2.4 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16082626|ref|NP_394902.1| - 1 9.6 18.3 2.4 8.4 4.2 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain AMP-binding PF00501.28 gi|16082417|ref|NP_394903.1| - 5.4e-28 97.7 0.0 1.8e-17 63.1 0.0 2.9 2 1 0 2 2 2 2 AMP-binding enzyme AMP-binding_C PF13193.6 gi|16082417|ref|NP_394903.1| - 0.00034 21.5 0.0 0.00057 20.8 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Carb_kinase PF01256.17 gi|16082418|ref|NP_394904.1| - 6.2e-43 147.0 0.1 1.1e-42 146.2 0.1 1.4 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|16082418|ref|NP_394904.1| - 3.6e-33 114.9 0.2 2.5e-32 112.1 0.0 2.0 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|16082418|ref|NP_394904.1| - 4.8e-08 32.7 0.1 3.7e-07 29.8 0.0 2.0 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|16082418|ref|NP_394904.1| - 0.0023 17.3 0.0 0.0047 16.3 0.0 1.6 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase CW_binding_2 PF04122.12 gi|16082418|ref|NP_394904.1| - 0.1 13.3 0.4 28 5.5 0.1 2.9 2 1 0 2 2 2 0 Putative cell wall binding repeat 2 Aldo_ket_red PF00248.21 gi|16082419|ref|NP_394905.1| - 4.4e-65 219.8 0.1 5.1e-65 219.6 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family ClpB_D2-small PF10431.9 gi|16082419|ref|NP_394905.1| - 0.014 15.4 0.0 0.062 13.4 0.0 2.1 2 0 0 2 2 2 0 C-terminal, D2-small domain, of ClpB protein ThiC-associated PF13667.6 gi|16082419|ref|NP_394905.1| - 0.021 14.6 0.1 0.4 10.5 0.0 2.4 2 0 0 2 2 2 0 ThiC-associated domain YgbB PF02542.16 gi|16082419|ref|NP_394905.1| - 0.022 15.0 0.0 0.1 12.9 0.0 1.9 2 0 0 2 2 2 0 YgbB family Polyketide_cyc2 PF10604.9 gi|16082420|ref|NP_394906.1| - 0.0049 17.1 0.9 0.013 15.8 0.9 2.0 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|16082420|ref|NP_394906.1| - 0.037 14.2 0.1 0.073 13.3 0.1 1.8 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DUF3379 PF11859.8 gi|16082421|ref|NP_394907.1| - 0.067 12.5 0.0 0.069 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) ACP_syn_III_C PF08541.10 gi|16082422|ref|NP_394908.1| - 6.1e-10 39.1 0.0 1.7e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|16082422|ref|NP_394908.1| - 4.8e-05 23.1 0.2 0.0063 16.2 0.0 2.2 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|16082422|ref|NP_394908.1| - 0.00016 21.1 0.1 0.00027 20.4 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|16082422|ref|NP_394908.1| - 0.0002 21.1 4.3 0.00025 20.8 1.1 2.5 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_N PF01154.17 gi|16082422|ref|NP_394908.1| - 0.013 15.4 0.1 0.028 14.3 0.0 1.6 2 0 0 2 2 2 0 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thiolase_N PF00108.23 gi|16082423|ref|NP_394909.1| - 2.5e-32 112.3 4.1 2e-31 109.3 2.3 2.4 2 1 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|16082423|ref|NP_394909.1| - 4.5e-10 39.2 0.0 9.1e-10 38.2 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|16082423|ref|NP_394909.1| - 2.2e-06 27.5 2.5 1.8e-05 24.5 1.7 2.6 2 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|16082423|ref|NP_394909.1| - 0.05 13.5 0.1 15 5.5 0.1 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OB_aCoA_assoc PF01796.17 gi|16082424|ref|NP_394910.1| - 1.2e-22 79.7 0.0 1.9e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|16082424|ref|NP_394910.1| - 2.6e-13 49.6 4.9 4.3e-13 48.8 4.9 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) TackOD1 PF18551.1 gi|16082424|ref|NP_394910.1| - 0.028 14.1 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Auto_anti-p27 PF06677.12 gi|16082424|ref|NP_394910.1| - 0.1 12.8 1.9 0.18 12.0 1.9 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HypA PF01155.19 gi|16082424|ref|NP_394910.1| - 0.11 12.5 0.3 0.2 11.7 0.3 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_7 PF02591.15 gi|16082424|ref|NP_394910.1| - 3.2 8.0 7.8 1.6 9.0 0.4 2.9 3 0 0 3 3 3 0 C4-type zinc ribbon domain RNase_HII PF01351.18 gi|16082425|ref|NP_394911.1| - 1.7e-45 155.3 0.0 2.2e-45 155.0 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease HII HEAT_2 PF13646.6 gi|16082425|ref|NP_394911.1| - 0.083 13.3 0.1 5.7 7.4 0.0 2.5 3 0 0 3 3 3 0 HEAT repeats DAGK_cat PF00781.24 gi|16082426|ref|NP_394912.1| - 1.4e-14 53.8 0.7 1.9e-14 53.4 0.7 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Penicil_amidase PF01804.18 gi|16082427|ref|NP_394913.1| - 2.1e-173 578.9 0.5 2.5e-173 578.7 0.5 1.0 1 0 0 1 1 1 1 Penicillin amidase GATase_4 PF13230.6 gi|16082428|ref|NP_394914.1| - 1.2e-08 34.3 0.0 1.5e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|16082428|ref|NP_394914.1| - 4.7e-07 30.1 0.0 1.3e-06 28.6 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain Voltage_CLC PF00654.20 gi|16082429|ref|NP_394915.1| - 2.4e-87 293.5 33.7 2.4e-87 293.5 33.7 2.0 2 0 0 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|16082429|ref|NP_394915.1| - 6.2e-15 55.4 0.4 2.9e-06 27.6 0.2 3.3 3 0 0 3 3 3 2 CBS domain Acyl-CoA_dh_N PF02771.16 gi|16082430|ref|NP_394916.1| - 2.2e-19 70.2 0.0 4.1e-19 69.3 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|16082430|ref|NP_394916.1| - 2.5e-17 62.8 0.0 5.1e-17 61.8 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|16082430|ref|NP_394916.1| - 2.1e-14 54.0 0.7 3.6e-14 53.2 0.1 1.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|16082430|ref|NP_394916.1| - 0.0034 17.6 0.6 0.0034 17.6 0.6 2.2 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Radical_SAM PF04055.21 gi|16082431|ref|NP_394917.1| - 2e-12 47.8 0.0 3.4e-12 47.0 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Pyr_redox_2 PF07992.14 gi|16082432|ref|NP_394918.1| - 1.2e-17 64.1 0.0 5.2e-17 62.0 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082432|ref|NP_394918.1| - 0.0049 17.4 0.1 0.056 14.0 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|16082432|ref|NP_394918.1| - 0.0094 16.0 0.1 0.76 9.8 0.0 2.5 2 0 0 2 2 2 2 FAD-NAD(P)-binding DUF1641 PF07849.11 gi|16082433|ref|NP_394919.1| - 0.29 11.1 2.8 1.8 8.5 0.0 3.3 5 0 0 5 5 5 0 Protein of unknown function (DUF1641) MFS_1 PF07690.16 gi|16082434|ref|NP_394920.1| - 1.1e-26 93.6 49.3 2.4e-14 53.0 16.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|16082434|ref|NP_394920.1| - 0.0001 21.3 16.2 0.23 10.3 7.9 2.9 1 1 1 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 gi|16082434|ref|NP_394920.1| - 0.00072 18.5 12.2 0.00072 18.5 12.2 2.5 1 1 0 2 2 2 1 Sugar (and other) transporter EamA PF00892.20 gi|16082435|ref|NP_394921.1| - 1.6e-23 83.4 44.7 3.9e-16 59.5 17.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family OrfB_IS605 PF01385.19 gi|16082436|ref|NP_394922.1| - 1.6e-27 96.1 1.4 2.3e-27 95.6 1.4 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|16082436|ref|NP_394922.1| - 7e-20 70.7 0.2 1.4e-19 69.7 0.2 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain C1_2 PF03107.16 gi|16082436|ref|NP_394922.1| - 0.0042 17.4 0.4 0.007 16.6 0.4 1.4 1 0 0 1 1 1 1 C1 domain Occludin_ELL PF07303.13 gi|16082436|ref|NP_394922.1| - 0.0064 17.2 2.7 0.011 16.4 2.7 1.4 1 0 0 1 1 1 1 Occludin homology domain Zn_Tnp_IS1595 PF12760.7 gi|16082436|ref|NP_394922.1| - 0.06 13.3 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.7 gi|16082436|ref|NP_394922.1| - 0.14 12.2 0.2 0.25 11.4 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon TMPIT PF07851.13 gi|16082436|ref|NP_394922.1| - 0.17 11.1 1.8 0.22 10.8 1.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein RecR PF02132.15 gi|16082436|ref|NP_394922.1| - 0.58 9.8 2.5 4 7.1 2.3 2.3 2 1 1 3 3 3 0 RecR protein eIF-5_eIF-2B PF01873.17 gi|16082436|ref|NP_394922.1| - 0.92 9.4 4.8 0.36 10.7 1.3 1.9 2 0 0 2 2 2 0 Domain found in IF2B/IF5 COX16 PF14138.6 gi|16082436|ref|NP_394922.1| - 0.94 10.0 4.6 1.8 9.1 4.6 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 Glycos_transf_2 PF00535.26 gi|16082438|ref|NP_394924.1| - 8.4e-13 48.5 0.2 1.2e-12 48.0 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|16082438|ref|NP_394924.1| - 2.3e-07 31.0 0.0 3.5e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Lactamase_B_2 PF12706.7 gi|16082439|ref|NP_394925.1| - 6.9e-15 55.1 0.4 2e-14 53.6 0.4 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|16082439|ref|NP_394925.1| - 4.7e-09 36.5 0.1 1e-08 35.4 0.1 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Terminase_6C PF17289.2 gi|16082439|ref|NP_394925.1| - 0.076 13.1 0.0 0.19 11.8 0.0 1.6 1 1 1 2 2 2 0 Terminase RNaseH-like domain Ribonuc_red_lgC PF02867.15 gi|16082440|ref|NP_394926.1| - 5.1e-162 540.1 0.0 2.3e-160 534.6 0.0 2.4 2 1 0 2 2 2 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|16082440|ref|NP_394926.1| - 4.9e-32 109.8 0.0 1.1e-31 108.6 0.0 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|16082440|ref|NP_394926.1| - 5.1e-21 75.0 1.9 5.1e-21 75.0 1.9 2.6 3 0 0 3 3 3 1 ATP cone domain Cnd1 PF12717.7 gi|16082440|ref|NP_394926.1| - 0.065 13.3 0.1 1.1 9.3 0.0 2.8 3 0 0 3 3 3 0 non-SMC mitotic condensation complex subunit 1 SPK PF04435.18 gi|16082440|ref|NP_394926.1| - 0.094 13.1 0.4 14 6.1 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF545) DUF4907 PF16250.5 gi|16082440|ref|NP_394926.1| - 0.14 12.1 0.1 0.51 10.3 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4907) DUF4777 PF16007.5 gi|16082440|ref|NP_394926.1| - 0.29 11.4 2.0 17 5.7 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4777) Phage_TAC_12 PF12363.8 gi|16082440|ref|NP_394926.1| - 0.4 11.1 6.0 1.2 9.6 0.2 3.7 4 0 0 4 4 4 0 Phage tail assembly chaperone protein, TAC FTCD_N PF07837.12 gi|16082441|ref|NP_394927.1| - 2.9e-66 222.6 0.0 4.6e-66 222.0 0.0 1.3 1 0 0 1 1 1 1 Formiminotransferase domain, N-terminal subdomain FTCD PF02971.14 gi|16082441|ref|NP_394927.1| - 1.5e-26 93.1 0.1 2.7e-26 92.3 0.1 1.4 1 0 0 1 1 1 1 Formiminotransferase domain Alk_phosphatase PF00245.20 gi|16082441|ref|NP_394927.1| - 0.037 13.0 0.0 0.055 12.4 0.0 1.2 1 0 0 1 1 1 0 Alkaline phosphatase FTCD_C PF04961.12 gi|16082442|ref|NP_394928.1| - 2.3e-65 219.7 0.8 2.7e-65 219.5 0.8 1.1 1 0 0 1 1 1 1 Formiminotransferase-cyclodeaminase Ant_C PF05586.11 gi|16082442|ref|NP_394928.1| - 0.015 15.9 0.1 0.026 15.1 0.1 1.4 1 0 0 1 1 1 0 Anthrax receptor C-terminus region DUF1943 PF09172.11 gi|16082442|ref|NP_394928.1| - 0.016 14.4 0.1 0.03 13.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) EMC3_TMCO1 PF01956.16 gi|16082442|ref|NP_394928.1| - 0.18 11.6 0.3 0.34 10.6 0.3 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like T3SSipB PF16535.5 gi|16082442|ref|NP_394928.1| - 0.26 11.8 3.2 0.51 10.8 2.9 1.6 1 1 1 2 2 2 0 Type III cell invasion protein SipB FTHFS PF01268.19 gi|16082443|ref|NP_394929.1| - 6.6e-223 740.9 0.0 7.4e-223 740.8 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase CbiA PF01656.23 gi|16082443|ref|NP_394929.1| - 0.00051 20.1 0.0 0.013 15.6 0.5 2.7 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Integrin_beta PF00362.18 gi|16082443|ref|NP_394929.1| - 0.042 13.5 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Integrin beta chain VWA domain ParA PF10609.9 gi|16082627|ref|NP_394930.1| - 6.8e-96 320.5 0.3 8e-96 320.2 0.3 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|16082627|ref|NP_394930.1| - 1e-17 64.3 0.0 2.2e-17 63.3 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|16082627|ref|NP_394930.1| - 7.2e-14 52.1 4.0 1.1e-11 44.9 4.0 2.3 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|16082627|ref|NP_394930.1| - 1e-07 31.5 2.0 3.6e-07 29.7 2.0 1.8 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|16082627|ref|NP_394930.1| - 1.5e-06 27.7 5.1 7.2e-06 25.4 1.0 2.8 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_26 PF13500.6 gi|16082627|ref|NP_394930.1| - 4.2e-05 23.5 1.1 0.015 15.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.18 gi|16082627|ref|NP_394930.1| - 5.2e-05 22.8 1.3 0.00093 18.7 0.1 2.3 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 gi|16082627|ref|NP_394930.1| - 0.0001 21.7 0.0 0.00018 20.9 0.0 1.3 1 0 0 1 1 1 1 VirC1 protein AAA_25 PF13481.6 gi|16082627|ref|NP_394930.1| - 0.00046 19.8 0.6 0.0016 18.1 0.1 1.9 2 0 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|16082627|ref|NP_394930.1| - 0.0028 17.2 0.3 0.23 10.9 0.1 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 gi|16082627|ref|NP_394930.1| - 0.0035 17.2 0.1 0.0075 16.1 0.1 1.6 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MeaB PF03308.16 gi|16082627|ref|NP_394930.1| - 0.0043 16.1 0.2 0.0092 15.0 0.2 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zn_Tnp_IS1595 PF12760.7 gi|16082627|ref|NP_394930.1| - 0.0093 15.9 0.1 0.075 13.0 0.1 2.0 2 0 0 2 2 2 1 Transposase zinc-ribbon domain SRP54 PF00448.22 gi|16082627|ref|NP_394930.1| - 0.013 15.1 0.3 0.027 14.1 0.3 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|16082627|ref|NP_394930.1| - 0.014 15.2 0.1 0.088 12.5 0.1 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein APS_kinase PF01583.20 gi|16082627|ref|NP_394930.1| - 0.016 15.1 0.1 0.032 14.1 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase Ubie_methyltran PF01209.18 gi|16082627|ref|NP_394930.1| - 0.02 14.3 0.1 0.041 13.2 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family PhoH PF02562.16 gi|16082627|ref|NP_394930.1| - 0.025 14.0 0.5 0.22 11.0 0.7 2.0 2 0 0 2 2 2 0 PhoH-like protein Desulfoferrod_N PF06397.12 gi|16082627|ref|NP_394930.1| - 0.032 13.8 0.9 0.062 12.9 0.9 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain RsgA_GTPase PF03193.16 gi|16082627|ref|NP_394930.1| - 0.064 13.2 0.3 0.12 12.3 0.3 1.4 1 0 0 1 1 1 0 RsgA GTPase NTPase_1 PF03266.15 gi|16082627|ref|NP_394930.1| - 0.12 12.3 0.1 0.32 10.9 0.1 1.6 1 0 0 1 1 1 0 NTPase zf-RRN7 PF11781.8 gi|16082627|ref|NP_394930.1| - 0.13 12.0 0.2 0.18 11.5 0.2 1.2 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 KTI12 PF08433.10 gi|16082627|ref|NP_394930.1| - 0.21 11.0 0.0 0.38 10.2 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF1610 PF07754.11 gi|16082627|ref|NP_394930.1| - 0.46 10.5 2.2 1.5 8.8 0.8 2.5 3 0 0 3 3 2 0 Domain of unknown function (DUF1610) MoaE PF02391.17 gi|16082444|ref|NP_394931.1| - 6.2e-38 129.6 0.1 6.9e-38 129.4 0.1 1.0 1 0 0 1 1 1 1 MoaE protein Ndr PF03096.14 gi|16082445|ref|NP_394932.1| - 2.3e-05 23.3 0.0 2.8e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Ndr family Orthoreo_P10 PF07204.11 gi|16082628|ref|NP_394934.1| - 0.046 13.7 1.7 0.12 12.4 0.1 2.4 2 0 0 2 2 2 0 Orthoreovirus membrane fusion protein p10 Cyt_bd_oxida_I PF01654.17 gi|16082629|ref|NP_394935.1| - 4.9e-91 305.4 33.6 5.5e-91 305.3 33.6 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I TENA_THI-4 PF03070.16 gi|16082447|ref|NP_394936.1| - 7e-25 88.1 0.6 8.7e-25 87.8 0.6 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family Atg8 PF02991.16 gi|16082447|ref|NP_394936.1| - 0.1 12.8 0.1 5.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Autophagy protein Atg8 ubiquitin like NTP_transferase PF00483.23 gi|16082448|ref|NP_394937.1| - 6e-47 160.3 0.0 7.6e-47 160.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|16082448|ref|NP_394937.1| - 2e-11 43.1 9.9 7.6e-05 22.3 0.5 4.7 3 1 2 5 5 5 3 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|16082448|ref|NP_394937.1| - 3.2e-10 40.6 0.0 4.2e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|16082448|ref|NP_394937.1| - 2.1e-07 29.5 2.9 3.1e-07 28.9 2.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|16082448|ref|NP_394937.1| - 0.0028 16.7 5.0 0.12 11.3 2.1 2.3 1 1 1 2 2 2 2 L-fucokinase Hexapep_2 PF14602.6 gi|16082448|ref|NP_394937.1| - 0.0088 15.8 3.7 0.0088 15.8 3.7 3.8 4 1 0 4 4 4 1 Hexapeptide repeat of succinyl-transferase LCCL PF03815.19 gi|16082448|ref|NP_394937.1| - 0.024 14.7 0.2 0.051 13.7 0.2 1.5 1 0 0 1 1 1 0 LCCL domain IspD PF01128.19 gi|16082448|ref|NP_394937.1| - 0.084 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF131 PF01998.17 gi|16082449|ref|NP_394938.1| - 1e-19 69.9 10.7 5.6e-19 67.5 0.6 2.1 2 0 0 2 2 2 2 Protein of unknown function DUF131 ASFV_J13L PF05568.11 gi|16082449|ref|NP_394938.1| - 0.015 15.0 0.9 0.027 14.2 0.9 1.4 1 0 0 1 1 1 0 African swine fever virus J13L protein CpxA_peri PF16527.5 gi|16082449|ref|NP_394938.1| - 0.086 13.2 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain DUF202 PF02656.15 gi|16082449|ref|NP_394938.1| - 0.27 11.7 1.2 11 6.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF202) SdpI PF13630.6 gi|16082449|ref|NP_394938.1| - 0.48 10.6 7.9 0.31 11.2 0.9 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family DUF2207 PF09972.9 gi|16082449|ref|NP_394938.1| - 3.4 6.3 6.4 10 4.7 6.4 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MCPsignal PF00015.21 gi|16082450|ref|NP_394939.1| - 0.005 16.7 2.9 0.005 16.7 2.9 3.2 1 1 2 3 3 3 1 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF948 PF06103.11 gi|16082450|ref|NP_394939.1| - 0.19 12.0 26.6 0.27 11.5 0.8 4.5 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF3772 PF12607.8 gi|16082450|ref|NP_394939.1| - 1.6 8.5 4.4 3.8 7.3 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3772) Baculo_PEP_C PF04513.12 gi|16082450|ref|NP_394939.1| - 3.2 7.8 14.6 0.16 12.0 1.0 3.3 1 1 3 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Laminin_II PF06009.12 gi|16082450|ref|NP_394939.1| - 9.4 6.3 44.5 0.045 13.8 10.2 4.3 1 1 4 5 5 5 0 Laminin Domain II MMR_HSR1_Xtn PF16897.5 gi|16082451|ref|NP_394940.1| - 1.6e-26 92.4 0.1 3.9e-26 91.1 0.1 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|16082451|ref|NP_394940.1| - 3e-24 85.3 0.1 6.2e-24 84.3 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|16082451|ref|NP_394940.1| - 3.9e-20 71.7 0.0 7.5e-20 70.7 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|16082451|ref|NP_394940.1| - 3.2e-16 59.3 0.2 1.5e-14 53.8 0.0 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|16082451|ref|NP_394940.1| - 0.00027 21.0 0.1 0.94 9.5 0.1 2.5 1 1 1 2 2 2 2 Dynamin family CBS PF00571.28 gi|16082451|ref|NP_394940.1| - 0.00092 19.6 0.5 0.77 10.2 0.0 2.8 2 1 0 2 2 2 1 CBS domain RsgA_GTPase PF03193.16 gi|16082451|ref|NP_394940.1| - 0.00098 19.1 0.1 0.057 13.3 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|16082451|ref|NP_394940.1| - 0.001 18.7 0.1 4.8 6.7 0.1 3.8 2 2 1 3 3 3 1 Elongation factor Tu GTP binding domain MeaB PF03308.16 gi|16082451|ref|NP_394940.1| - 0.015 14.3 0.1 0.66 8.9 0.0 2.6 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Phytoreo_Pns PF05451.11 gi|16082451|ref|NP_394940.1| - 0.017 14.3 0.3 0.025 13.7 0.3 1.2 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 Roc PF08477.13 gi|16082451|ref|NP_394940.1| - 0.032 14.5 0.0 0.15 12.3 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 gi|16082451|ref|NP_394940.1| - 0.033 13.6 0.0 0.061 12.7 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Arf PF00025.21 gi|16082451|ref|NP_394940.1| - 0.049 13.1 0.0 1.9 7.9 0.0 2.4 2 0 0 2 2 2 0 ADP-ribosylation factor family AIG1 PF04548.16 gi|16082451|ref|NP_394940.1| - 0.085 12.2 0.0 0.27 10.5 0.0 1.9 2 0 0 2 2 2 0 AIG1 family FMN_red PF03358.15 gi|16082451|ref|NP_394940.1| - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 NADPH-dependent FMN reductase MnmE_helical PF12631.7 gi|16082451|ref|NP_394940.1| - 0.15 12.2 0.0 0.26 11.4 0.0 1.5 1 1 0 1 1 1 0 MnmE helical domain Peptidase_S41 PF03572.18 gi|16082452|ref|NP_394941.1| - 3.4e-25 88.5 0.0 6.1e-25 87.7 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S41 Tricorn_C1 PF14684.6 gi|16082452|ref|NP_394941.1| - 3e-21 75.3 0.9 5.5e-21 74.4 0.9 1.5 1 0 0 1 1 1 1 Tricorn protease C1 domain Tricorn_PDZ PF14685.6 gi|16082452|ref|NP_394941.1| - 4.5e-21 74.6 0.0 9.8e-21 73.5 0.0 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain PD40 PF07676.12 gi|16082452|ref|NP_394941.1| - 2.4e-07 30.5 15.8 0.00038 20.3 0.0 6.4 7 0 0 7 7 7 2 WD40-like Beta Propeller Repeat DUF5050 PF16472.5 gi|16082452|ref|NP_394941.1| - 0.00015 21.1 0.0 0.058 12.6 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function (DUF5050) NusG_II PF07009.11 gi|16082452|ref|NP_394941.1| - 0.098 12.9 0.0 7.5 6.8 0.0 3.0 3 0 0 3 3 3 0 NusG domain II DUF2095 PF09868.9 gi|16082453|ref|NP_394942.1| - 0.0017 18.3 1.1 0.0023 17.9 0.9 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2095) ABC_tran PF00005.27 gi|16082454|ref|NP_394943.1| - 2.2e-36 125.4 0.0 1.8e-17 64.1 0.0 2.5 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|16082454|ref|NP_394943.1| - 1.9e-13 50.4 0.2 2.5e-06 27.1 0.0 2.9 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|16082454|ref|NP_394943.1| - 3.5e-09 36.3 6.4 1.1e-08 34.8 6.4 1.8 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.27 gi|16082454|ref|NP_394943.1| - 1.4e-07 31.1 2.6 1.4e-07 31.1 2.6 2.2 3 0 0 3 3 3 1 4Fe-4S binding domain AAA_21 PF13304.6 gi|16082454|ref|NP_394943.1| - 1.7e-07 31.3 8.8 0.13 12.1 0.0 4.4 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|16082454|ref|NP_394943.1| - 1.1e-06 28.6 1.2 0.56 9.9 0.2 3.5 2 1 1 3 3 3 3 AAA ATPase domain AAA_23 PF13476.6 gi|16082454|ref|NP_394943.1| - 1.4e-06 29.0 0.4 0.008 16.7 0.1 2.4 1 1 1 2 2 2 2 AAA domain Fer4_6 PF12837.7 gi|16082454|ref|NP_394943.1| - 0.00019 21.3 1.9 0.00019 21.3 1.9 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain RsgA_GTPase PF03193.16 gi|16082454|ref|NP_394943.1| - 0.0011 18.9 0.3 0.42 10.5 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|16082454|ref|NP_394943.1| - 0.0014 18.3 1.0 1.3 8.8 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain Fer4_21 PF14697.6 gi|16082454|ref|NP_394943.1| - 0.0023 18.0 6.4 0.0044 17.1 6.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|16082454|ref|NP_394943.1| - 0.0033 17.5 6.7 0.0064 16.6 6.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|16082454|ref|NP_394943.1| - 0.004 17.7 8.5 0.018 15.6 9.0 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|16082454|ref|NP_394943.1| - 0.0069 16.5 19.1 0.016 15.3 1.4 2.1 2 1 1 3 3 2 2 4Fe-4S dicluster domain MMR_HSR1 PF01926.23 gi|16082454|ref|NP_394943.1| - 0.016 15.3 0.4 2.1 8.5 0.1 2.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase Fer4_16 PF13484.6 gi|16082454|ref|NP_394943.1| - 0.031 15.2 0.5 0.031 15.2 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|16082454|ref|NP_394943.1| - 0.18 12.4 0.2 0.18 12.4 0.2 2.4 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|16082454|ref|NP_394943.1| - 0.41 10.9 11.1 0.057 13.5 1.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain TGT PF01702.18 gi|16082455|ref|NP_394944.1| - 8.7e-66 222.5 0.0 1.2e-65 222.0 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.6 gi|16082455|ref|NP_394944.1| - 2.6e-24 85.1 0.1 5.1e-24 84.2 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|16082455|ref|NP_394944.1| - 2.2e-12 46.8 0.9 4.8e-12 45.7 0.9 1.6 1 0 0 1 1 1 1 PUA domain EamA PF00892.20 gi|16082456|ref|NP_394945.1| - 4.5e-38 130.5 43.1 1.8e-19 70.2 17.3 2.0 2 0 0 2 2 2 2 EamA-like transporter family NdhL PF10716.9 gi|16082456|ref|NP_394945.1| - 0.017 15.0 0.9 0.017 15.0 0.9 3.3 3 2 0 3 3 3 0 NADH dehydrogenase transmembrane subunit TPT PF03151.16 gi|16082456|ref|NP_394945.1| - 0.78 9.0 28.0 0.11 11.8 13.4 2.1 1 1 1 2 2 2 0 Triose-phosphate Transporter family FAD_binding_3 PF01494.19 gi|16082457|ref|NP_394946.1| - 1.6e-18 67.1 0.7 6e-16 58.6 0.7 2.9 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 gi|16082457|ref|NP_394946.1| - 1.1e-08 34.5 0.2 4.1e-05 22.8 0.1 2.2 2 0 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|16082457|ref|NP_394946.1| - 4.1e-08 33.3 0.1 1.3e-07 31.7 0.1 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|16082457|ref|NP_394946.1| - 4.2e-08 32.3 0.1 1.5e-07 30.5 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|16082457|ref|NP_394946.1| - 2.2e-06 27.5 2.0 1.3e-05 24.9 0.1 2.2 1 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|16082457|ref|NP_394946.1| - 8.5e-06 25.2 0.0 1.8e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|16082457|ref|NP_394946.1| - 1.7e-05 24.2 0.7 0.00015 21.1 0.4 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|16082457|ref|NP_394946.1| - 3.7e-05 22.8 0.0 0.073 11.9 0.0 2.2 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|16082457|ref|NP_394946.1| - 6.6e-05 22.2 0.1 0.00036 19.7 0.1 2.0 2 1 0 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|16082457|ref|NP_394946.1| - 7.5e-05 22.0 0.1 0.00013 21.2 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|16082457|ref|NP_394946.1| - 0.00028 20.4 0.2 0.00034 20.1 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|16082457|ref|NP_394946.1| - 0.0018 17.6 0.2 0.0097 15.2 0.1 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|16082457|ref|NP_394946.1| - 0.0044 17.6 0.1 0.86 10.2 0.0 3.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|16082457|ref|NP_394946.1| - 0.037 14.0 0.4 0.77 9.7 0.0 2.8 3 1 1 4 4 4 0 FAD-NAD(P)-binding ApbA PF02558.16 gi|16082457|ref|NP_394946.1| - 0.062 12.9 0.3 0.13 11.9 0.1 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 gi|16082457|ref|NP_394946.1| - 0.079 12.8 0.1 0.47 10.3 0.0 2.0 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PadR PF03551.14 gi|16082458|ref|NP_394947.1| - 1.7e-16 60.0 0.1 2.5e-16 59.4 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4364 PF14277.6 gi|16082458|ref|NP_394947.1| - 6e-05 22.8 0.9 0.0002 21.2 0.9 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_45 PF14947.6 gi|16082458|ref|NP_394947.1| - 0.0038 17.2 0.5 0.48 10.4 0.1 2.8 3 0 0 3 3 3 1 Winged helix-turn-helix RTP PF02334.16 gi|16082458|ref|NP_394947.1| - 0.004 17.8 0.0 0.0081 16.8 0.0 1.5 1 0 0 1 1 1 1 Replication terminator protein DUF3116 PF11313.8 gi|16082458|ref|NP_394947.1| - 0.007 16.2 0.3 0.013 15.3 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) DUF505 PF04458.12 gi|16082458|ref|NP_394947.1| - 0.014 13.8 0.0 0.018 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_5 PF01022.20 gi|16082458|ref|NP_394947.1| - 0.036 13.9 0.0 6.9 6.6 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|16082458|ref|NP_394947.1| - 0.13 12.1 0.3 0.44 10.5 0.3 1.9 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Gln-synt_C PF00120.24 gi|16082459|ref|NP_394948.1| - 1.7e-127 425.1 0.0 2.2e-127 424.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|16082459|ref|NP_394948.1| - 1.3e-23 82.5 0.0 2.5e-23 81.6 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Strumpellin PF10266.9 gi|16082460|ref|NP_394949.1| - 0.023 12.4 0.0 0.027 12.2 0.0 1.0 1 0 0 1 1 1 0 Hereditary spastic paraplegia protein strumpellin Rep_fac_C PF08542.11 gi|16082630|ref|NP_394950.1| - 4.5e-22 78.3 0.4 9.9e-22 77.2 0.1 1.8 2 0 0 2 2 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|16082630|ref|NP_394950.1| - 2.6e-12 47.3 0.1 1.2e-11 45.2 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|16082630|ref|NP_394950.1| - 1.4e-11 44.4 6.7 2e-08 34.2 0.2 3.6 2 2 1 3 3 3 2 DNA polymerase III, delta subunit AAA_assoc_2 PF16193.5 gi|16082630|ref|NP_394950.1| - 8.5e-06 26.0 0.0 2.2e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 gi|16082630|ref|NP_394950.1| - 0.00012 22.0 0.0 0.00022 21.1 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|16082630|ref|NP_394950.1| - 0.00012 21.9 0.0 0.00049 19.9 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ResIII PF04851.15 gi|16082630|ref|NP_394950.1| - 0.0019 18.2 0.1 0.013 15.5 0.0 2.0 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit Mg_chelatase PF01078.21 gi|16082630|ref|NP_394950.1| - 0.0027 17.1 0.0 0.86 8.9 0.0 2.5 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|16082630|ref|NP_394950.1| - 0.0039 17.1 0.0 0.0072 16.3 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain TIP49 PF06068.13 gi|16082630|ref|NP_394950.1| - 0.0042 16.4 1.9 0.093 11.9 0.1 3.1 2 2 0 3 3 3 1 TIP49 P-loop domain Sigma54_activat PF00158.26 gi|16082630|ref|NP_394950.1| - 0.0048 16.6 0.1 2.5 7.8 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|16082630|ref|NP_394950.1| - 0.0098 16.3 0.1 0.82 10.0 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain DUF815 PF05673.13 gi|16082630|ref|NP_394950.1| - 0.014 14.6 0.0 0.031 13.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) PhoH PF02562.16 gi|16082630|ref|NP_394950.1| - 0.023 14.2 0.0 0.068 12.6 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein IstB_IS21 PF01695.17 gi|16082630|ref|NP_394950.1| - 0.029 14.1 0.0 0.069 12.9 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 gi|16082630|ref|NP_394950.1| - 0.031 13.8 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_2 PF07724.14 gi|16082630|ref|NP_394950.1| - 0.047 13.8 0.0 0.097 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) TrwB_AAD_bind PF10412.9 gi|16082630|ref|NP_394950.1| - 0.06 12.2 0.0 0.16 10.8 0.0 1.8 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 gi|16082630|ref|NP_394950.1| - 0.085 12.1 0.0 0.19 11.0 0.0 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|16082630|ref|NP_394950.1| - 0.092 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|16082630|ref|NP_394950.1| - 0.095 13.0 0.6 9.4 6.5 0.0 2.5 1 1 1 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 gi|16082630|ref|NP_394950.1| - 0.12 12.5 0.0 0.32 11.1 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|16082630|ref|NP_394950.1| - 0.12 11.6 0.0 0.32 10.3 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin Flavodoxin_1 PF00258.25 gi|16082630|ref|NP_394950.1| - 0.14 12.3 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin AAA_28 PF13521.6 gi|16082630|ref|NP_394950.1| - 0.17 12.1 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Helicase_C PF00271.31 gi|16082461|ref|NP_394951.1| - 4.9e-22 78.4 1.8 3.6e-21 75.6 0.1 3.2 3 1 1 4 4 4 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|16082461|ref|NP_394951.1| - 1e-21 77.7 0.0 2.6e-21 76.4 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|16082461|ref|NP_394951.1| - 2.6e-16 59.9 0.1 1.8e-15 57.2 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|16082461|ref|NP_394951.1| - 0.025 13.8 0.1 0.13 11.5 0.0 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 gi|16082461|ref|NP_394951.1| - 0.11 12.8 0.1 3.4 7.9 0.0 3.0 2 2 0 2 2 2 0 AAA domain PIN PF01850.21 gi|16082462|ref|NP_394952.1| - 0.021 15.3 0.1 0.03 14.8 0.1 1.4 1 1 0 1 1 1 0 PIN domain MarR PF01047.22 gi|16082463|ref|NP_394953.1| - 2.1e-06 27.6 0.1 3.6e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|16082463|ref|NP_394953.1| - 2.5e-05 24.0 0.0 4.4e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|16082463|ref|NP_394953.1| - 2.6e-05 24.1 0.3 4.4e-05 23.4 0.3 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|16082463|ref|NP_394953.1| - 0.00015 21.6 0.0 0.00027 20.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|16082463|ref|NP_394953.1| - 0.00028 20.4 0.1 0.0005 19.6 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|16082463|ref|NP_394953.1| - 0.011 15.7 0.0 0.02 14.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|16082463|ref|NP_394953.1| - 0.014 15.1 0.1 0.025 14.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family AbiEi_4 PF13338.6 gi|16082463|ref|NP_394953.1| - 0.014 15.5 0.0 0.025 14.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF505 PF04458.12 gi|16082463|ref|NP_394953.1| - 0.034 12.5 0.0 0.042 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Penicillinase_R PF03965.16 gi|16082463|ref|NP_394953.1| - 0.06 13.7 0.0 0.09 13.1 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor TrmB PF01978.19 gi|16082463|ref|NP_394953.1| - 0.073 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Dimerisation PF08100.11 gi|16082463|ref|NP_394953.1| - 0.08 13.0 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Dimerisation domain VirB3 PF05101.13 gi|16082463|ref|NP_394953.1| - 0.19 12.0 1.9 0.3 11.3 1.9 1.4 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF2207 PF09972.9 gi|16082463|ref|NP_394953.1| - 0.89 8.2 6.2 0.94 8.2 5.3 1.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) SHOCT PF09851.9 gi|16082464|ref|NP_394954.1| - 3.7e-06 26.5 4.3 6.1e-06 25.8 4.3 1.4 1 0 0 1 1 1 1 Short C-terminal domain GPDPase_memb PF10110.9 gi|16082464|ref|NP_394954.1| - 0.00092 18.1 0.1 0.001 17.9 0.1 1.0 1 0 0 1 1 1 1 Membrane domain of glycerophosphoryl diester phosphodiesterase OAD_gamma PF04277.13 gi|16082464|ref|NP_394954.1| - 0.0053 17.3 0.0 0.0053 17.3 0.0 2.0 2 0 0 2 2 2 1 Oxaloacetate decarboxylase, gamma chain SurA_N_2 PF13623.6 gi|16082464|ref|NP_394954.1| - 0.01 15.7 0.3 0.1 12.5 0.0 2.0 2 0 0 2 2 2 0 SurA N-terminal domain Yip1 PF04893.17 gi|16082464|ref|NP_394954.1| - 0.019 14.7 5.3 0.024 14.3 5.3 1.1 1 0 0 1 1 1 0 Yip1 domain DUF2207 PF09972.9 gi|16082464|ref|NP_394954.1| - 0.037 12.8 1.8 0.041 12.6 1.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HemY_N PF07219.13 gi|16082464|ref|NP_394954.1| - 0.052 13.7 0.6 2 8.6 0.0 2.1 2 0 0 2 2 2 0 HemY protein N-terminus VbhA PF18495.1 gi|16082464|ref|NP_394954.1| - 0.053 13.4 0.3 0.081 12.8 0.3 1.3 1 0 0 1 1 1 0 Antitoxin VbhA DUF4131 PF13567.6 gi|16082464|ref|NP_394954.1| - 0.062 12.9 0.1 0.11 12.1 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) SurA_N_3 PF13624.6 gi|16082464|ref|NP_394954.1| - 0.11 12.3 0.5 1.9 8.3 0.0 2.1 2 0 0 2 2 2 0 SurA N-terminal domain DUF4191 PF13829.6 gi|16082464|ref|NP_394954.1| - 0.15 11.4 4.1 0.85 8.9 4.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) Orf78 PF06024.12 gi|16082464|ref|NP_394954.1| - 1.4 9.3 3.9 4 7.8 0.1 2.2 2 0 0 2 2 2 0 Orf78 (ac78) RIFIN PF02009.16 gi|16082464|ref|NP_394954.1| - 3.1 7.6 5.8 6.5 6.5 5.8 1.5 1 0 0 1 1 1 0 Rifin Copper-bind PF00127.20 gi|16082465|ref|NP_394955.1| - 3.7e-06 27.3 0.3 4e-05 24.0 0.3 2.2 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family SoxE PF06525.11 gi|16082465|ref|NP_394955.1| - 1.9e-05 24.2 0.8 0.00038 20.0 0.1 2.2 2 0 0 2 2 2 1 Sulfocyanin (SoxE) domain Cu-oxidase_3 PF07732.15 gi|16082465|ref|NP_394955.1| - 0.0013 18.7 5.1 0.014 15.4 5.0 2.3 1 1 0 1 1 1 1 Multicopper oxidase Cu-oxidase PF00394.22 gi|16082465|ref|NP_394955.1| - 0.14 12.3 0.4 8 6.6 0.0 2.1 2 0 0 2 2 2 0 Multicopper oxidase Exo_endo_phos PF03372.23 gi|16082631|ref|NP_394956.1| - 1.7e-17 63.7 0.0 2.7e-17 63.1 0.0 1.3 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|16082631|ref|NP_394956.1| - 8.9e-09 35.2 0.1 4.6e-08 32.9 0.1 2.0 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Potyvirid-P3 PF13608.6 gi|16082631|ref|NP_394956.1| - 0.17 10.9 0.1 0.23 10.4 0.1 1.1 1 0 0 1 1 1 0 Protein P3 of Potyviral polyprotein AMP-binding PF00501.28 gi|16082632|ref|NP_394958.1| - 1.9e-70 237.6 0.0 2.2e-70 237.4 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|16082632|ref|NP_394958.1| - 1.7e-25 89.8 0.1 4.3e-25 88.5 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain SHMT PF00464.19 gi|16082467|ref|NP_394959.1| - 1.8e-62 211.2 0.0 2.3e-62 210.9 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|16082467|ref|NP_394959.1| - 1.9e-05 24.0 0.0 6.2e-05 22.3 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.13 gi|16082467|ref|NP_394959.1| - 0.00011 21.3 0.0 0.00048 19.2 0.0 1.9 2 0 0 2 2 2 1 L-seryl-tRNA selenium transferase Beta_elim_lyase PF01212.21 gi|16082467|ref|NP_394959.1| - 0.00062 19.1 0.0 0.0015 17.9 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|16082467|ref|NP_394959.1| - 0.053 12.0 0.0 0.1 11.1 0.0 1.5 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|16082467|ref|NP_394959.1| - 0.16 10.9 0.0 0.29 10.0 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Thermoplasma_acidophilum_DSM_1728_uid61573/NC_002578.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Thermoplasma_acidophilum_DSM_1728_uid61573/NC_002578.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Thermoplasma_acidophilum_DSM_1728_uid61573/NC_002578.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Thermoplasma_acidophilum_DSM_1728_uid61573/NC_002578.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:09:18 2019 # [ok]