# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L1 PF00687.21 gi|14521983|ref|NP_125692.1| - 4.6e-50 170.2 0.6 5.5e-50 169.9 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family ATP-cone PF03477.16 gi|14521983|ref|NP_125692.1| - 0.14 12.8 5.7 1.7 9.3 0.2 3.6 2 2 0 3 3 3 0 ATP cone domain Ribosomal_L11 PF00298.19 gi|14520219|ref|NP_125693.1| - 7.6e-25 87.2 1.6 1.3e-24 86.4 1.6 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 gi|14520219|ref|NP_125693.1| - 4.7e-24 84.0 2.4 9.1e-24 83.1 2.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Spt5-NGN PF03439.13 gi|14520220|ref|NP_125694.1| - 2e-26 91.7 0.0 3.7e-26 90.8 0.0 1.4 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|14520220|ref|NP_125694.1| - 3.5e-10 39.5 0.6 2.7e-09 36.6 0.6 2.3 3 0 0 3 3 3 1 KOW motif SecE PF00584.20 gi|14520221|ref|NP_125695.1| - 1.5e-07 31.2 0.1 1.8e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Tubulin PF00091.25 gi|14520222|ref|NP_125696.1| - 7.9e-47 160.0 0.6 1.9e-46 158.8 0.6 1.7 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|14520222|ref|NP_125696.1| - 1.6e-32 111.6 1.0 1.6e-32 111.6 1.0 2.8 3 0 0 3 3 3 1 FtsZ family, C-terminal domain DUF4147 PF13660.6 gi|14520222|ref|NP_125696.1| - 0.001 18.7 3.4 0.054 13.0 1.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4147) Tubulin_2 PF13809.6 gi|14520222|ref|NP_125696.1| - 0.003 16.8 0.5 0.21 10.7 0.0 2.2 2 0 0 2 2 2 2 Tubulin like ThiF PF00899.21 gi|14520222|ref|NP_125696.1| - 0.018 14.4 0.1 0.048 13.0 0.0 1.7 2 0 0 2 2 2 0 ThiF family DUF3236 PF11576.8 gi|14520222|ref|NP_125696.1| - 0.019 14.7 1.6 0.034 13.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3236) NAD_binding_10 PF13460.6 gi|14520222|ref|NP_125696.1| - 0.027 14.4 0.3 0.076 12.9 0.0 1.9 2 0 0 2 2 2 0 NAD(P)H-binding NAD_binding_7 PF13241.6 gi|14520222|ref|NP_125696.1| - 0.055 13.9 0.4 0.34 11.4 0.1 2.3 1 1 2 3 3 3 0 Putative NAD(P)-binding CTD_bind PF04818.13 gi|14520223|ref|NP_125697.1| - 0.15 12.9 0.1 0.24 12.2 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase II-binding domain. tRNA_deacylase PF04414.12 gi|14520224|ref|NP_125698.1| - 1e-66 224.4 0.0 1.2e-66 224.1 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase NTP_transf_2 PF01909.23 gi|14520225|ref|NP_125699.1| - 1.8e-08 34.6 0.3 1.2e-07 32.0 0.2 2.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|14520225|ref|NP_125699.1| - 7.6e-05 22.7 0.0 0.00029 20.8 0.0 2.0 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase DUF4269 PF14091.6 gi|14520225|ref|NP_125699.1| - 0.0013 19.0 0.0 0.0025 18.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4269) AMMECR1 PF01871.17 gi|14520227|ref|NP_125701.1| - 2.2e-53 180.3 0.0 2.5e-53 180.1 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 QRPTase_C PF01729.19 gi|14520228|ref|NP_125702.1| - 1.4e-51 174.6 0.6 1.9e-51 174.2 0.6 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|14520228|ref|NP_125702.1| - 5.3e-32 109.7 0.2 1e-31 108.9 0.2 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|14520228|ref|NP_125702.1| - 0.0019 17.6 0.3 0.018 14.5 0.0 2.1 1 1 1 2 2 2 1 Ribulose-phosphate 3 epimerase family TMP-TENI PF02581.17 gi|14520228|ref|NP_125702.1| - 0.002 17.5 0.1 0.0043 16.4 0.1 1.6 1 1 0 1 1 1 1 Thiamine monophosphate synthase DAHP_snth_FXD PF18152.1 gi|14520228|ref|NP_125702.1| - 0.05 13.4 0.8 0.56 10.1 0.2 2.6 2 0 0 2 2 2 0 DAHP synthase ferredoxin-like domain Radical_SAM PF04055.21 gi|14520228|ref|NP_125702.1| - 0.062 13.7 1.0 0.47 10.8 0.9 2.5 1 1 0 1 1 1 0 Radical SAM superfamily Biotin_lipoyl PF00364.22 gi|14520228|ref|NP_125702.1| - 2.8 7.8 7.7 0.89 9.4 0.1 2.8 2 1 1 3 3 3 0 Biotin-requiring enzyme Acetyltransf_18 PF18014.1 gi|14520229|ref|NP_125703.1| - 1e-18 67.4 0.0 9.9e-17 60.9 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|14520229|ref|NP_125703.1| - 5.5e-11 42.7 0.0 9.5e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|14520229|ref|NP_125703.1| - 1.9e-08 34.6 0.2 3.6e-08 33.7 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|14520229|ref|NP_125703.1| - 2.7e-08 33.8 0.0 4.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|14520229|ref|NP_125703.1| - 2.9e-06 27.4 0.0 9e-05 22.6 0.0 2.8 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain NadA PF02445.16 gi|14520230|ref|NP_125704.1| - 9.4e-112 373.0 3.7 1.1e-111 372.8 3.7 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Sua5_yciO_yrdC PF01300.18 gi|14520230|ref|NP_125704.1| - 0.0014 18.1 0.2 0.0035 16.8 0.2 1.8 1 1 0 1 1 1 1 Telomere recombination RNA_pol_RpbG PF16992.5 gi|14520230|ref|NP_125704.1| - 0.0029 17.6 0.1 0.0059 16.7 0.1 1.5 1 0 0 1 1 1 1 DNA-directed RNA polymerase, subunit G DUF4535 PF15054.6 gi|14520230|ref|NP_125704.1| - 0.15 11.8 0.4 15 5.4 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4535) DUF401 PF04165.12 gi|14520231|ref|NP_125705.1| - 2.3e-65 221.5 39.4 3e-65 221.1 39.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF401) Na_H_antiport_2 PF13726.6 gi|14520231|ref|NP_125705.1| - 6.2 7.0 21.0 0.71 10.0 5.6 3.4 2 1 1 3 3 3 0 Na+-H+ antiporter family FAD_binding_2 PF00890.24 gi|14520232|ref|NP_125706.1| - 1e-64 219.2 0.3 1.3e-64 218.9 0.3 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|14520232|ref|NP_125706.1| - 2.2e-11 43.8 0.2 1.1e-05 25.5 0.1 2.3 1 1 1 2 2 2 2 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|14520232|ref|NP_125706.1| - 6.6e-11 42.0 2.0 1.7e-06 27.5 1.5 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|14520232|ref|NP_125706.1| - 1.1e-07 31.8 1.8 0.00032 20.4 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|14520232|ref|NP_125706.1| - 1.1e-07 30.9 1.5 0.0021 16.8 0.0 2.4 3 0 0 3 3 3 2 HI0933-like protein GIDA PF01134.22 gi|14520232|ref|NP_125706.1| - 8e-07 28.5 0.6 0.004 16.3 0.2 2.1 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|14520232|ref|NP_125706.1| - 9.7e-06 25.0 1.2 1.5e-05 24.4 1.2 1.4 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|14520232|ref|NP_125706.1| - 0.0003 21.0 0.9 0.00082 19.6 0.9 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|14520232|ref|NP_125706.1| - 0.0016 18.5 0.5 0.037 14.0 0.5 2.4 1 1 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|14520232|ref|NP_125706.1| - 0.0028 18.2 0.7 0.034 14.7 0.4 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|14520232|ref|NP_125706.1| - 0.042 12.7 2.1 2.3 7.0 1.2 2.1 2 0 0 2 2 2 0 Tryptophan halogenase FAD_oxidored PF12831.7 gi|14520232|ref|NP_125706.1| - 0.071 12.4 1.7 0.099 12.0 1.7 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase AcylCoA_DH_N PF12418.8 gi|14520232|ref|NP_125706.1| - 0.16 12.0 0.6 1.3 9.1 0.2 2.3 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase N terminal Lycopene_cycl PF05834.12 gi|14520232|ref|NP_125706.1| - 0.2 10.7 0.2 1.2 8.1 0.3 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|14520232|ref|NP_125706.1| - 0.28 10.4 0.8 0.68 9.1 0.3 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PEPcase_2 PF14010.6 gi|14520233|ref|NP_125707.1| - 2.7e-171 570.4 0.4 3.3e-171 570.1 0.4 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase PF00311.17 gi|14520233|ref|NP_125707.1| - 0.021 12.9 0.0 0.031 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase Metallophos PF00149.28 gi|14520234|ref|NP_125708.1| - 3.8e-18 66.7 0.3 4.7e-18 66.4 0.3 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|14520234|ref|NP_125708.1| - 9.4e-08 32.4 0.4 4.4e-06 27.0 0.4 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain TruD PF01142.18 gi|14520234|ref|NP_125708.1| - 0.032 13.1 0.0 0.041 12.7 0.0 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) Cpn60_TCP1 PF00118.24 gi|14520235|ref|NP_125709.1| - 9.3e-189 628.1 25.5 1.1e-188 627.9 25.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Phage_tube PF04985.14 gi|14520235|ref|NP_125709.1| - 0.009 15.7 2.1 0.056 13.1 0.1 2.4 2 0 0 2 2 2 1 Phage tail tube protein FII AAA_5 PF07728.14 gi|14520235|ref|NP_125709.1| - 0.053 13.5 0.0 0.14 12.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PALP PF00291.25 gi|14520235|ref|NP_125709.1| - 0.16 11.3 3.0 3.2 7.1 0.0 2.7 2 1 1 3 3 3 0 Pyridoxal-phosphate dependent enzyme RNB PF00773.19 gi|14520235|ref|NP_125709.1| - 0.19 11.0 1.0 0.33 10.2 0.8 1.5 1 1 0 1 1 1 0 RNB domain FF PF01846.19 gi|14520236|ref|NP_125710.1| - 0.041 14.1 0.2 0.23 11.7 0.1 2.1 2 0 0 2 2 2 0 FF domain Polbeta PF18765.1 gi|14520237|ref|NP_125711.1| - 2.2e-22 79.0 1.0 2.8e-22 78.6 1.0 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|14520237|ref|NP_125711.1| - 6.5e-06 26.3 1.3 9.1e-06 25.9 1.3 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain GH97_N PF14508.6 gi|14520237|ref|NP_125711.1| - 0.025 14.1 0.1 0.032 13.7 0.1 1.2 1 0 0 1 1 1 0 Glycosyl-hydrolase 97 N-terminal DUF86 PF01934.17 gi|14520238|ref|NP_125712.1| - 1.2e-28 99.4 0.0 1.6e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 HEPN_RiboL-PSP PF18735.1 gi|14520238|ref|NP_125712.1| - 0.05 13.5 0.1 0.19 11.6 0.0 1.7 1 1 1 2 2 2 0 RiboL-PSP-HEPN Radical_SAM PF04055.21 gi|14520239|ref|NP_125713.1| - 3.4e-17 63.3 0.1 7.2e-17 62.3 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|14520239|ref|NP_125713.1| - 1e-10 42.0 0.0 1.6e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14520239|ref|NP_125713.1| - 1.4e-09 38.1 0.1 2.5e-09 37.3 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain NRDD PF13597.6 gi|14520240|ref|NP_125714.1| - 1e-151 506.5 0.0 1.2e-151 506.3 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase HypA PF01155.19 gi|14520240|ref|NP_125714.1| - 0.00078 19.4 0.1 0.0018 18.3 0.1 1.5 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin_2 PF18073.1 gi|14520240|ref|NP_125714.1| - 0.0027 17.4 4.1 0.0057 16.4 4.1 1.5 1 0 0 1 1 1 1 Rubredoxin metal binding domain TackOD1 PF18551.1 gi|14520240|ref|NP_125714.1| - 0.0042 16.8 0.0 0.008 15.9 0.0 1.4 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zinc_ribbon_15 PF17032.5 gi|14520240|ref|NP_125714.1| - 0.023 15.4 0.1 0.056 14.2 0.1 1.6 1 0 0 1 1 1 0 zinc-ribbon family GFP PF01353.22 gi|14520240|ref|NP_125714.1| - 0.16 11.4 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 Green fluorescent protein zf-ribbon_3 PF13248.6 gi|14520240|ref|NP_125714.1| - 1.7 8.2 5.5 9 5.9 5.7 1.9 1 1 0 1 1 1 0 zinc-ribbon domain ABC_tran PF00005.27 gi|14520241|ref|NP_125715.1| - 1.8e-34 119.2 0.0 3.2e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|14520241|ref|NP_125715.1| - 2.6e-13 50.6 0.2 1.7e-12 48.0 0.0 2.4 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 gi|14520241|ref|NP_125715.1| - 1.4e-09 38.0 0.3 6.2e-09 35.9 0.0 2.2 3 0 0 3 3 3 1 TOBE domain AAA_21 PF13304.6 gi|14520241|ref|NP_125715.1| - 2.8e-05 24.1 0.0 0.23 11.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 gi|14520241|ref|NP_125715.1| - 0.00047 20.4 0.2 0.0025 18.1 0.1 2.2 2 0 0 2 2 2 1 TOBE domain AAA_22 PF13401.6 gi|14520241|ref|NP_125715.1| - 0.0012 19.1 0.0 0.0023 18.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14520241|ref|NP_125715.1| - 0.0012 19.3 0.1 0.033 14.6 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|14520241|ref|NP_125715.1| - 0.0012 19.3 0.0 0.0026 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 gi|14520241|ref|NP_125715.1| - 0.0024 17.8 0.0 0.0044 16.9 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 gi|14520241|ref|NP_125715.1| - 0.0025 17.3 0.3 0.11 11.9 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 gi|14520241|ref|NP_125715.1| - 0.014 16.0 0.0 0.045 14.3 0.0 2.0 1 0 0 1 1 1 0 CysA C-terminal regulatory domain RsgA_GTPase PF03193.16 gi|14520241|ref|NP_125715.1| - 0.014 15.3 0.0 0.032 14.1 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 gi|14520241|ref|NP_125715.1| - 0.019 14.9 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|14520241|ref|NP_125715.1| - 0.035 13.8 0.0 0.099 12.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|14520241|ref|NP_125715.1| - 0.038 13.2 0.0 0.038 13.1 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_27 PF13514.6 gi|14520241|ref|NP_125715.1| - 0.042 13.4 0.0 0.07 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|14520241|ref|NP_125715.1| - 0.12 12.7 0.0 0.28 11.6 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 gi|14520241|ref|NP_125715.1| - 0.14 12.4 0.3 0.26 11.5 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14520241|ref|NP_125715.1| - 0.22 12.0 1.3 0.28 11.7 0.3 1.6 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|14520242|ref|NP_125716.1| - 8.5e-21 74.5 19.8 8.5e-21 74.5 19.8 2.4 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|14520243|ref|NP_125717.1| - 1.7e-10 41.0 19.3 1.7e-10 41.0 19.3 2.6 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_8 PF13416.6 gi|14520244|ref|NP_125718.1| - 8.5e-39 134.0 0.2 1.1e-38 133.7 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|14520244|ref|NP_125718.1| - 3.4e-36 125.8 4.0 4.8e-36 125.3 4.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|14520244|ref|NP_125718.1| - 1.5e-07 31.1 0.1 8.3e-06 25.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|14520244|ref|NP_125718.1| - 0.00088 19.1 0.0 0.018 14.8 0.0 2.8 3 1 0 3 3 3 1 Bacterial extracellular solute-binding protein TPR_12 PF13424.6 gi|14520245|ref|NP_125719.1| - 9.3e-19 67.5 16.5 2.4e-09 37.4 1.1 4.2 4 1 1 5 5 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|14520245|ref|NP_125719.1| - 2.6e-15 55.8 7.6 0.00065 20.3 0.3 5.7 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|14520245|ref|NP_125719.1| - 5.7e-15 54.1 17.9 4.9e-05 23.1 2.7 6.5 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|14520245|ref|NP_125719.1| - 6.5e-12 45.9 3.4 9.4e-06 26.2 0.3 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|14520245|ref|NP_125719.1| - 1.3e-11 44.6 4.1 0.003 17.3 0.0 3.4 1 1 2 3 3 3 3 26S proteasome subunit RPN7 TPR_7 PF13176.6 gi|14520245|ref|NP_125719.1| - 1.8e-11 43.2 7.9 0.0036 17.2 0.4 5.7 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|14520245|ref|NP_125719.1| - 5.2e-11 41.9 12.9 0.0015 18.3 1.9 5.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|14520245|ref|NP_125719.1| - 5.5e-10 38.7 14.5 0.024 14.8 1.0 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|14520245|ref|NP_125719.1| - 1.5e-08 34.8 6.9 0.0035 17.9 0.2 5.7 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|14520245|ref|NP_125719.1| - 4.2e-08 33.6 12.3 7.7e-05 23.1 0.5 4.4 1 1 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|14520245|ref|NP_125719.1| - 4.9e-08 32.6 11.6 0.027 14.3 0.1 5.8 5 1 0 5 5 5 2 Tetratricopeptide repeat ANAPC5 PF12862.7 gi|14520245|ref|NP_125719.1| - 1.7e-06 28.0 5.0 0.012 15.7 0.5 4.3 2 1 2 4 4 4 2 Anaphase-promoting complex subunit 5 SNAP PF14938.6 gi|14520245|ref|NP_125719.1| - 2e-06 27.4 0.7 1.3e-05 24.8 0.1 2.2 2 0 0 2 2 2 1 Soluble NSF attachment protein, SNAP PPR PF01535.20 gi|14520245|ref|NP_125719.1| - 2.1e-06 27.6 7.0 0.055 13.7 0.1 5.9 5 0 0 5 5 5 1 PPR repeat TPR_MalT PF17874.1 gi|14520245|ref|NP_125719.1| - 7.1e-06 25.6 0.2 2.4e-05 23.9 0.2 1.6 1 1 0 1 1 1 1 MalT-like TPR region TPR_17 PF13431.6 gi|14520245|ref|NP_125719.1| - 5.2e-05 23.3 2.2 0.057 13.8 0.1 4.2 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|14520245|ref|NP_125719.1| - 0.00022 20.6 5.1 0.088 12.0 0.3 4.0 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|14520245|ref|NP_125719.1| - 0.00056 20.1 5.3 0.38 11.0 1.3 3.7 1 1 3 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 OSCP PF00213.18 gi|14520245|ref|NP_125719.1| - 0.00072 19.7 4.9 0.51 10.5 0.3 3.4 3 1 0 3 3 3 1 ATP synthase delta (OSCP) subunit CobN-Mg_chel PF02514.16 gi|14520245|ref|NP_125719.1| - 0.0063 14.3 3.0 1.9 6.1 0.3 2.9 2 1 0 3 3 3 1 CobN/Magnesium Chelatase MIT PF04212.18 gi|14520245|ref|NP_125719.1| - 0.007 16.4 0.1 0.007 16.4 0.1 5.6 7 1 0 7 7 6 1 MIT (microtubule interacting and transport) domain Glutaminase PF04960.15 gi|14520245|ref|NP_125719.1| - 0.024 13.8 0.1 0.06 12.5 0.1 1.6 2 0 0 2 2 2 0 Glutaminase YfdX PF10938.8 gi|14520245|ref|NP_125719.1| - 0.036 14.0 0.0 0.2 11.6 0.0 2.3 1 1 0 1 1 1 0 YfdX protein TPR_20 PF14561.6 gi|14520245|ref|NP_125719.1| - 0.05 13.9 10.0 0.75 10.2 0.3 4.7 2 1 3 5 5 5 0 Tetratricopeptide repeat DUF2225 PF09986.9 gi|14520245|ref|NP_125719.1| - 0.055 13.2 2.7 1 9.0 1.8 2.6 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) FTA2 PF13095.6 gi|14520245|ref|NP_125719.1| - 0.065 12.9 0.0 0.19 11.4 0.0 1.9 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 TPR_4 PF07721.14 gi|14520245|ref|NP_125719.1| - 0.098 13.3 0.0 9 7.2 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_21 PF09976.9 gi|14520245|ref|NP_125719.1| - 0.14 11.8 3.7 0.53 10.0 0.4 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain PPR_2 PF13041.6 gi|14520245|ref|NP_125719.1| - 0.29 11.4 0.8 8.9 6.6 0.0 3.3 3 0 0 3 3 2 0 PPR repeat family TPR_11 PF13414.6 gi|14520245|ref|NP_125719.1| - 0.61 9.8 17.9 14 5.5 0.2 5.7 5 1 0 5 5 5 0 TPR repeat Fis1_TPR_C PF14853.6 gi|14520245|ref|NP_125719.1| - 0.66 10.1 4.6 2.9 8.0 0.9 3.0 3 0 0 3 3 2 0 Fis1 C-terminal tetratricopeptide repeat CorA PF01544.18 gi|14520245|ref|NP_125719.1| - 0.77 9.0 7.9 0.079 12.3 1.3 2.4 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein EF1_GNE PF00736.19 gi|14520246|ref|NP_125720.1| - 9.1e-20 70.6 0.5 1e-19 70.5 0.5 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain DUF1610 PF07754.11 gi|14521984|ref|NP_125721.1| - 2.5e-14 52.9 15.6 2.8e-14 52.7 5.8 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1610) zf-ribbon_3 PF13248.6 gi|14521984|ref|NP_125721.1| - 3.5e-05 23.0 8.1 0.2 11.1 0.2 3.4 3 0 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|14521984|ref|NP_125721.1| - 0.00011 21.7 2.5 0.00011 21.7 2.5 3.2 3 1 0 3 3 2 2 zinc-ribbon domain DZR PF12773.7 gi|14521984|ref|NP_125721.1| - 0.00037 20.5 11.2 0.0053 16.7 11.2 2.1 1 1 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|14521984|ref|NP_125721.1| - 0.007 16.4 10.3 0.0073 16.3 0.9 2.1 1 1 1 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 gi|14521984|ref|NP_125721.1| - 0.0078 16.4 1.7 0.0078 16.4 1.7 2.3 2 1 0 2 2 2 1 zinc-ribbon zf-HIT PF04438.16 gi|14521984|ref|NP_125721.1| - 0.018 14.9 4.2 0.018 14.9 4.2 2.9 2 1 0 2 2 2 0 HIT zinc finger OrfB_Zn_ribbon PF07282.11 gi|14521984|ref|NP_125721.1| - 0.018 15.0 1.8 0.018 15.0 1.8 2.6 1 1 2 3 3 3 0 Putative transposase DNA-binding domain zf-CHY PF05495.12 gi|14521984|ref|NP_125721.1| - 0.02 15.4 7.6 0.036 14.6 7.6 1.5 1 1 0 1 1 1 0 CHY zinc finger zf-C2HC5 PF06221.13 gi|14521984|ref|NP_125721.1| - 0.02 14.9 3.7 0.02 14.9 3.7 2.1 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type C1_2 PF03107.16 gi|14521984|ref|NP_125721.1| - 0.023 15.0 8.3 13 6.1 8.3 2.2 1 1 0 1 1 1 0 C1 domain PhnA_Zn_Ribbon PF08274.12 gi|14521984|ref|NP_125721.1| - 0.041 13.8 15.3 0.54 10.3 0.4 4.0 3 1 1 4 4 4 0 PhnA Zinc-Ribbon HscB_4_cys PF18256.1 gi|14521984|ref|NP_125721.1| - 0.041 13.7 1.3 0.041 13.7 1.3 3.0 1 1 2 4 4 3 0 Co-chaperone HscB tetracysteine metal binding motif PolC_DP2 PF03833.13 gi|14521984|ref|NP_125721.1| - 0.042 11.7 3.7 0.047 11.6 3.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Zn-ribbon_8 PF09723.10 gi|14521984|ref|NP_125721.1| - 0.042 14.0 3.2 0.042 14.0 3.2 2.9 1 1 1 2 2 2 0 Zinc ribbon domain zf-C3HC4_4 PF15227.6 gi|14521984|ref|NP_125721.1| - 0.053 13.7 0.8 0.053 13.7 0.8 2.3 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-UDP PF14569.6 gi|14521984|ref|NP_125721.1| - 0.071 13.2 3.6 0.085 13.0 3.6 1.1 1 0 0 1 1 1 0 Zinc-binding RING-finger Sgf11 PF08209.11 gi|14521984|ref|NP_125721.1| - 0.1 12.2 14.0 0.35 10.5 0.4 3.6 3 1 1 4 4 4 0 Sgf11 (transcriptional regulation protein) zf-C2H2 PF00096.26 gi|14521984|ref|NP_125721.1| - 0.14 12.7 9.8 6.4 7.4 0.5 3.8 4 0 0 4 4 4 0 Zinc finger, C2H2 type Rubredoxin_2 PF18073.1 gi|14521984|ref|NP_125721.1| - 0.15 11.8 16.4 4.7 7.0 0.2 3.9 3 1 0 3 3 3 0 Rubredoxin metal binding domain zinc-ribbons_6 PF07191.12 gi|14521984|ref|NP_125721.1| - 0.2 11.7 9.9 0.25 11.4 0.6 2.1 1 1 1 2 2 2 0 zinc-ribbons IBR PF01485.21 gi|14521984|ref|NP_125721.1| - 0.32 11.2 9.1 4.8 7.5 9.1 2.1 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Zn_Tnp_IS1595 PF12760.7 gi|14521984|ref|NP_125721.1| - 0.4 10.7 19.4 0.7 9.9 13.3 3.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-MYND PF01753.18 gi|14521984|ref|NP_125721.1| - 0.41 10.8 7.8 45 4.3 7.8 2.2 1 1 0 1 1 1 0 MYND finger DUF2039 PF10217.9 gi|14521984|ref|NP_125721.1| - 0.47 10.8 7.9 1.5 9.2 7.8 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) zf_UBZ PF18439.1 gi|14521984|ref|NP_125721.1| - 0.48 10.1 16.9 1 9.0 0.3 3.9 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger YhfH PF14149.6 gi|14521984|ref|NP_125721.1| - 0.57 10.2 15.2 1.9 8.5 2.7 3.4 2 1 1 3 3 3 0 YhfH-like protein DUF1272 PF06906.11 gi|14521984|ref|NP_125721.1| - 0.61 10.2 11.5 0.67 10.1 2.4 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zinc_ribbon_10 PF10058.9 gi|14521984|ref|NP_125721.1| - 0.66 9.7 15.7 2.3 8.0 2.7 3.8 1 1 3 4 4 4 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS91 PF14319.6 gi|14521984|ref|NP_125721.1| - 0.68 10.0 8.9 1.3 9.1 1.6 2.1 1 1 1 2 2 2 0 Transposase zinc-binding domain MCM_OB PF17207.3 gi|14521984|ref|NP_125721.1| - 0.8 9.6 5.3 1.1 9.1 5.3 1.4 1 1 0 1 1 1 0 MCM OB domain DUF2321 PF10083.9 gi|14521984|ref|NP_125721.1| - 0.81 9.3 6.4 0.66 9.6 4.4 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) NOB1_Zn_bind PF08772.11 gi|14521984|ref|NP_125721.1| - 0.9 9.7 10.5 0.46 10.7 4.5 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-NADH-PPase PF09297.11 gi|14521984|ref|NP_125721.1| - 0.94 9.2 13.7 0.73 9.5 5.0 3.3 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RING_5 PF14634.6 gi|14521984|ref|NP_125721.1| - 1 9.3 12.0 22 5.1 12.0 2.4 1 1 0 1 1 1 0 zinc-RING finger domain FYVE_2 PF02318.16 gi|14521984|ref|NP_125721.1| - 1.4 9.2 6.2 0.78 10.0 3.2 1.9 1 1 1 2 2 2 0 FYVE-type zinc finger TF_Zn_Ribbon PF08271.12 gi|14521984|ref|NP_125721.1| - 1.4 8.5 19.8 6.2 6.4 0.6 3.2 3 1 0 3 3 2 0 TFIIB zinc-binding zf-Mss51 PF13824.6 gi|14521984|ref|NP_125721.1| - 1.4 9.0 12.5 8.5 6.6 2.2 2.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-tcix PF14952.6 gi|14521984|ref|NP_125721.1| - 1.6 8.4 14.0 3.1 7.5 1.2 3.1 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding Anti-TRAP PF15777.5 gi|14521984|ref|NP_125721.1| - 1.9 8.5 12.1 0.24 11.4 3.3 2.2 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-C4_Topoisom PF01396.19 gi|14521984|ref|NP_125721.1| - 2 8.3 12.4 5.8 6.8 0.4 3.5 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger zf-AN1 PF01428.16 gi|14521984|ref|NP_125721.1| - 2 8.6 11.8 7.1 6.9 2.9 2.7 1 1 1 3 3 3 0 AN1-like Zinc finger zf_C2H2_10 PF18414.1 gi|14521984|ref|NP_125721.1| - 2.1 8.0 10.4 3.7 7.2 0.1 2.6 3 0 0 3 3 2 0 C2H2 type zinc-finger NRDD PF13597.6 gi|14521984|ref|NP_125721.1| - 2.1 7.0 10.5 0.37 9.5 1.4 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-HYPF PF07503.12 gi|14521984|ref|NP_125721.1| - 2.4 8.0 15.2 5.9 6.7 5.7 3.3 2 2 0 2 2 2 0 HypF finger Zn_ribbon_SprT PF17283.2 gi|14521984|ref|NP_125721.1| - 2.5 8.1 19.1 3.1 7.8 4.4 3.7 1 1 1 2 2 1 0 SprT-like zinc ribbon domain DUF2752 PF10825.8 gi|14521984|ref|NP_125721.1| - 2.8 8.1 0.0 2.8 8.1 0.0 2.8 3 1 0 3 3 2 0 Protein of unknown function (DUF2752) DUF2256 PF10013.9 gi|14521984|ref|NP_125721.1| - 2.8 8.1 11.9 2.5 8.3 0.1 3.2 1 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) ADK_lid PF05191.14 gi|14521984|ref|NP_125721.1| - 2.8 8.0 11.8 30 4.7 0.1 3.2 2 1 0 2 2 2 0 Adenylate kinase, active site lid LIM PF00412.22 gi|14521984|ref|NP_125721.1| - 3.1 8.1 10.2 3e+02 1.8 10.2 2.9 1 1 0 1 1 1 0 LIM domain A2L_zn_ribbon PF08792.10 gi|14521984|ref|NP_125721.1| - 3.4 7.5 12.5 19 5.1 0.1 3.6 3 1 0 3 3 3 0 A2L zinc ribbon domain Prok-RING_1 PF14446.6 gi|14521984|ref|NP_125721.1| - 3.8 7.5 11.9 0.31 11.0 2.6 2.6 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 NMD3 PF04981.13 gi|14521984|ref|NP_125721.1| - 3.9 6.9 8.0 4.9 6.5 8.0 1.1 1 0 0 1 1 1 0 NMD3 family DUF2072 PF09845.9 gi|14521984|ref|NP_125721.1| - 4 7.7 11.1 0.22 11.8 1.3 2.1 1 1 1 2 2 2 0 Zn-ribbon containing protein zf-C3HC4_3 PF13920.6 gi|14521984|ref|NP_125721.1| - 4.5 7.2 13.4 1.4e+02 2.4 0.1 2.6 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF35_N PF12172.8 gi|14521984|ref|NP_125721.1| - 5.1 7.1 18.1 1.4 8.9 4.2 3.6 2 2 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-trcl PF13451.6 gi|14521984|ref|NP_125721.1| - 5.3 7.0 15.9 12 5.8 1.0 3.9 2 1 2 4 4 4 0 Probable zinc-ribbon domain zf-dskA_traR PF01258.17 gi|14521984|ref|NP_125721.1| - 8 6.5 14.3 3 7.8 0.1 3.8 3 1 1 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger DNA_ligase_ZBD PF03119.16 gi|14521984|ref|NP_125721.1| - 8.2 6.5 13.2 21 5.2 0.4 3.6 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain UbiA PF01040.18 gi|161723322|ref|NP_125722.2| - 1.3e-39 136.0 11.1 1.8e-39 135.5 11.1 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family Pox_A14 PF05767.12 gi|161723322|ref|NP_125722.2| - 0.17 12.1 0.9 0.54 10.4 0.6 2.1 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 SSF PF00474.17 gi|14520249|ref|NP_125724.1| - 1.1e-84 284.7 32.7 1.8e-84 284.0 32.7 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family OATP PF03137.20 gi|14520249|ref|NP_125724.1| - 0.87 7.8 6.8 3 6.0 6.8 1.9 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family RIFIN PF02009.16 gi|14520249|ref|NP_125724.1| - 1.7 8.4 6.7 3.6 7.4 6.7 1.5 1 0 0 1 1 1 0 Rifin AFOR_C PF01314.18 gi|14520250|ref|NP_125725.1| - 4.6e-96 322.1 0.0 6.1e-96 321.7 0.0 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|14520250|ref|NP_125725.1| - 9.8e-70 234.5 0.0 1.6e-69 233.8 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain CRM1_repeat_3 PF18787.1 gi|14520250|ref|NP_125725.1| - 0.089 12.9 0.1 0.23 11.6 0.0 1.7 2 0 0 2 2 2 0 CRM1 / Exportin repeat 3 Aldo_ket_red PF00248.21 gi|14520251|ref|NP_125726.1| - 5.4e-68 229.3 0.0 2.9e-66 223.7 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family AP2 PF00847.20 gi|14520251|ref|NP_125726.1| - 0.0025 18.0 0.1 0.0053 17.0 0.1 1.5 1 0 0 1 1 1 1 AP2 domain TBPIP PF07106.13 gi|14520251|ref|NP_125726.1| - 0.14 12.2 0.1 19 5.3 0.0 2.4 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain HTH_5 PF01022.20 gi|14520252|ref|NP_125727.1| - 8.9e-15 54.3 0.1 1.3e-14 53.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14520252|ref|NP_125727.1| - 1.3e-14 54.0 0.0 1.9e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|14520252|ref|NP_125727.1| - 8.3e-08 32.0 0.2 1.5e-07 31.2 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14520252|ref|NP_125727.1| - 2.6e-06 26.9 0.2 1.7e-05 24.3 0.2 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|14520252|ref|NP_125727.1| - 4e-06 26.7 0.1 7.5e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 HTH domain PadR PF03551.14 gi|14520252|ref|NP_125727.1| - 5.4e-06 26.3 1.4 2.4e-05 24.2 1.4 1.9 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family MarR_2 PF12802.7 gi|14520252|ref|NP_125727.1| - 5e-05 23.1 0.0 7e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|14520252|ref|NP_125727.1| - 7.3e-05 22.9 0.1 0.00011 22.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|14520252|ref|NP_125727.1| - 8.2e-05 22.5 0.0 0.00017 21.5 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|14520252|ref|NP_125727.1| - 0.00061 19.5 0.0 0.001 18.8 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_CodY PF08222.11 gi|14520252|ref|NP_125727.1| - 0.0011 18.4 0.0 0.003 17.1 0.0 1.6 2 0 0 2 2 2 1 CodY helix-turn-helix domain Rrf2 PF02082.20 gi|14520252|ref|NP_125727.1| - 0.0014 19.0 0.1 0.0021 18.3 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator ArsR PF09824.9 gi|14520252|ref|NP_125727.1| - 0.0014 18.3 0.2 0.0014 18.2 0.2 1.1 1 0 0 1 1 1 1 ArsR transcriptional regulator HxlR PF01638.17 gi|14520252|ref|NP_125727.1| - 0.0022 17.8 0.1 0.0027 17.5 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Mga PF05043.13 gi|14520252|ref|NP_125727.1| - 0.0031 18.1 0.2 0.0054 17.3 0.1 1.5 1 1 0 1 1 1 1 Mga helix-turn-helix domain HTH_28 PF13518.6 gi|14520252|ref|NP_125727.1| - 0.0031 17.6 0.0 0.0044 17.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|14520252|ref|NP_125727.1| - 0.0035 17.5 0.0 0.0059 16.7 0.0 1.5 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_10 PF04967.12 gi|14520252|ref|NP_125727.1| - 0.0038 17.0 0.0 0.007 16.1 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_Crp_2 PF13545.6 gi|14520252|ref|NP_125727.1| - 0.0063 16.5 0.0 0.014 15.4 0.0 1.6 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain TFIIE_alpha PF02002.17 gi|14520252|ref|NP_125727.1| - 0.007 16.2 0.9 0.0079 16.0 0.9 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_8 PF02954.19 gi|14520252|ref|NP_125727.1| - 0.008 15.9 0.3 0.012 15.4 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_29 PF13551.6 gi|14520252|ref|NP_125727.1| - 0.0088 16.1 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_36 PF13730.6 gi|14520252|ref|NP_125727.1| - 0.022 14.7 1.4 0.13 12.2 0.2 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_26 PF13443.6 gi|14520252|ref|NP_125727.1| - 0.026 15.0 0.1 0.087 13.3 0.1 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_41 PF14502.6 gi|14520252|ref|NP_125727.1| - 0.026 14.2 0.1 0.066 12.9 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain GntR PF00392.21 gi|14520252|ref|NP_125727.1| - 0.034 13.8 0.0 0.068 12.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_Tnp_1 PF01527.20 gi|14520252|ref|NP_125727.1| - 0.046 14.0 0.1 0.064 13.6 0.1 1.4 1 1 0 1 1 1 0 Transposase BLACT_WH PF17778.1 gi|14520252|ref|NP_125727.1| - 0.053 13.5 2.1 0.06 13.3 0.8 1.7 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain LZ_Tnp_IS481 PF13011.6 gi|14520252|ref|NP_125727.1| - 0.073 13.6 0.0 0.091 13.3 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 IF2_N PF04760.15 gi|14520252|ref|NP_125727.1| - 0.074 12.9 0.2 0.28 11.0 0.1 2.0 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region DUF2202 PF09968.9 gi|14520253|ref|NP_125728.1| - 6.4e-60 201.7 3.5 7.6e-60 201.4 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein domain (DUF2202) Rubrerythrin PF02915.17 gi|14520253|ref|NP_125728.1| - 1.4e-05 25.5 0.2 2.4e-05 24.8 0.2 1.4 1 1 0 1 1 1 1 Rubrerythrin DUF3231 PF11553.8 gi|14520253|ref|NP_125728.1| - 0.0019 17.9 0.5 0.043 13.5 0.1 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF3231) DnaB_2 PF07261.11 gi|14520253|ref|NP_125728.1| - 0.011 15.5 3.1 3.8 7.3 0.4 3.2 1 1 2 3 3 3 0 Replication initiation and membrane attachment DUF3987 PF13148.6 gi|14520253|ref|NP_125728.1| - 0.1 11.6 0.1 0.5 9.3 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3987) TPPII_N PF12583.8 gi|14520253|ref|NP_125728.1| - 0.27 11.8 0.9 94 3.6 0.0 3.0 2 1 1 3 3 3 0 Tripeptidyl peptidase II N terminal Lactamase_B PF00753.27 gi|14520254|ref|NP_125729.1| - 9.6e-22 78.0 0.0 1.3e-21 77.6 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14520254|ref|NP_125729.1| - 3e-06 26.9 0.0 4.8e-06 26.2 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 gi|14520254|ref|NP_125729.1| - 0.00014 21.4 0.0 0.00016 21.2 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|14520254|ref|NP_125729.1| - 0.0096 15.4 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain DUF5448 PF17526.2 gi|14520254|ref|NP_125729.1| - 0.096 12.9 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5448) DBI_PRT PF02277.17 gi|14520255|ref|NP_125730.1| - 0.002 17.4 0.0 0.0031 16.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase PIN_3 PF13470.6 gi|33356661|ref|NP_125731.2| - 2.8e-15 57.1 0.0 3.8e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 PIN domain PIN PF01850.21 gi|33356661|ref|NP_125731.2| - 0.0086 16.6 0.1 0.037 14.5 0.1 1.9 1 1 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|33356661|ref|NP_125731.2| - 0.0097 16.1 0.2 0.038 14.2 0.2 1.9 1 1 0 1 1 1 1 PIN domain PIN_10 PF18478.1 gi|33356661|ref|NP_125731.2| - 0.026 14.8 0.0 0.069 13.4 0.0 1.7 1 0 0 1 1 1 0 PIN like domain RHH_1 PF01402.21 gi|14520257|ref|NP_125732.1| - 7e-07 29.0 0.0 7e-07 29.0 0.0 2.8 3 1 1 4 4 4 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|14520257|ref|NP_125732.1| - 0.00028 21.0 0.0 0.00035 20.7 0.0 1.3 1 1 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family HicB_lk_antitox PF15919.5 gi|14520257|ref|NP_125732.1| - 0.00033 20.8 0.2 0.0015 18.6 0.0 2.0 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system Spectrin PF00435.21 gi|14520257|ref|NP_125732.1| - 0.0037 17.7 2.0 0.0057 17.1 2.0 1.3 1 0 0 1 1 1 1 Spectrin repeat sCache_2 PF17200.4 gi|14520257|ref|NP_125732.1| - 0.016 15.1 0.5 0.03 14.2 0.4 1.5 1 1 0 1 1 1 0 Single Cache domain 2 DUF5388 PF17363.2 gi|14520257|ref|NP_125732.1| - 0.027 14.7 0.0 8.9 6.6 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5388) SAM_Exu PF18609.1 gi|14520257|ref|NP_125732.1| - 0.032 14.3 0.9 0.065 13.3 0.9 1.5 1 0 0 1 1 1 0 Exuperantia SAM-like domain OB_Dis3 PF17849.1 gi|14520257|ref|NP_125732.1| - 0.072 13.1 0.3 0.44 10.6 0.3 2.1 1 1 0 1 1 1 0 Dis3-like cold-shock domain 2 (CSD2) NTP_transf_3 PF12804.7 gi|14520258|ref|NP_125733.1| - 2.2e-16 60.6 0.0 2.7e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|14520258|ref|NP_125733.1| - 0.00013 22.0 0.0 0.00021 21.3 0.0 1.5 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|14520258|ref|NP_125733.1| - 0.21 11.3 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AbiEii PF08843.11 gi|14520259|ref|NP_125734.1| - 1.1e-14 55.0 0.2 1.4e-14 54.7 0.2 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system AbiEi_4 PF13338.6 gi|14520260|ref|NP_125735.1| - 5.8e-09 36.0 0.3 1.3e-08 34.9 0.3 1.6 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin TrmB PF01978.19 gi|14520260|ref|NP_125735.1| - 5.4e-07 29.4 0.5 1.2e-06 28.3 0.5 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Sulfolobus_pRN PF05584.11 gi|14520260|ref|NP_125735.1| - 1.4e-05 25.1 1.6 0.00012 22.0 0.3 2.6 3 0 0 3 3 3 1 Sulfolobus plasmid regulatory protein AbiEi_1 PF09407.10 gi|14520260|ref|NP_125735.1| - 3.5e-05 24.2 0.0 5.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 AbiEi antitoxin C-terminal domain MarR_2 PF12802.7 gi|14520260|ref|NP_125735.1| - 0.00017 21.4 0.3 0.00031 20.6 0.3 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|14520260|ref|NP_125735.1| - 0.00026 20.9 0.9 0.00046 20.1 0.9 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|14520260|ref|NP_125735.1| - 0.00038 20.4 0.2 0.0011 18.8 0.2 1.8 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|14520260|ref|NP_125735.1| - 0.00046 19.9 0.1 0.0018 18.0 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|14520260|ref|NP_125735.1| - 0.0009 19.6 0.1 0.0015 18.8 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 gi|14520260|ref|NP_125735.1| - 0.0019 18.2 0.2 0.0038 17.3 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|14520260|ref|NP_125735.1| - 0.003 17.7 0.2 0.0059 16.7 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|14520260|ref|NP_125735.1| - 0.007 16.1 1.1 0.047 13.5 1.1 2.4 1 1 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 gi|14520260|ref|NP_125735.1| - 0.0082 16.3 0.1 0.023 14.9 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|14520260|ref|NP_125735.1| - 0.0091 15.6 0.3 0.018 14.7 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|14520260|ref|NP_125735.1| - 0.013 15.1 0.2 0.026 14.1 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PaaX PF07848.12 gi|14520260|ref|NP_125735.1| - 0.015 15.5 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 PaaX-like protein HTH_5 PF01022.20 gi|14520260|ref|NP_125735.1| - 0.023 14.6 1.2 0.046 13.6 1.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|14520260|ref|NP_125735.1| - 0.073 13.3 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Rio2_N PF09202.11 gi|14520260|ref|NP_125735.1| - 0.075 13.3 0.1 0.24 11.6 0.1 1.8 2 0 0 2 2 2 0 Rio2, N-terminal MerR_1 PF13411.6 gi|14520260|ref|NP_125735.1| - 0.09 12.9 0.2 0.74 10.0 0.0 2.4 2 0 0 2 2 2 0 MerR HTH family regulatory protein DUF4423 PF14394.6 gi|14520260|ref|NP_125735.1| - 0.11 12.2 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) TFIIE_alpha PF02002.17 gi|14520260|ref|NP_125735.1| - 0.11 12.3 0.6 0.24 11.3 0.6 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit Penicillinase_R PF03965.16 gi|14520260|ref|NP_125735.1| - 0.11 12.8 0.1 0.21 11.9 0.1 1.4 1 0 0 1 1 1 0 Penicillinase repressor CobS PF02654.15 gi|14520261|ref|NP_125736.1| - 1.2e-41 143.2 9.8 1.4e-41 143.0 9.8 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase Pmp3 PF01679.17 gi|14520261|ref|NP_125736.1| - 0.02 15.1 0.7 0.02 15.1 0.7 2.9 3 1 0 3 3 3 0 Proteolipid membrane potential modulator TF_Zn_Ribbon PF08271.12 gi|14520262|ref|NP_125737.1| - 0.00086 18.8 1.0 0.62 9.6 0.1 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding Lar_restr_allev PF14354.6 gi|14520262|ref|NP_125737.1| - 0.0041 17.5 0.0 0.006 16.9 0.0 1.3 1 1 0 1 1 1 1 Restriction alleviation protein Lar zf-C2HC5 PF06221.13 gi|14520262|ref|NP_125737.1| - 0.011 15.8 0.2 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type Zn-ribbon_8 PF09723.10 gi|14520262|ref|NP_125737.1| - 0.024 14.7 0.2 0.96 9.6 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|14520262|ref|NP_125737.1| - 0.026 14.3 0.1 0.042 13.6 0.1 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger DZR PF12773.7 gi|14520262|ref|NP_125737.1| - 0.08 13.0 0.0 0.15 12.1 0.0 1.4 1 1 0 1 1 1 0 Double zinc ribbon Vps36-NZF-N PF16988.5 gi|14520262|ref|NP_125737.1| - 0.11 11.9 0.1 3.1 7.2 0.0 2.2 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-ribbon_3 PF13248.6 gi|14520262|ref|NP_125737.1| - 0.13 11.7 2.7 0.62 9.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain PgpA PF04608.13 gi|14520263|ref|NP_125738.1| - 8.2e-12 45.4 0.0 1.1e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobD_Cbib PF03186.13 gi|14520264|ref|NP_125739.1| - 5.4e-84 281.7 0.0 6.9e-84 281.3 0.0 1.0 1 0 0 1 1 1 1 CobD/Cbib protein DUF5518 PF17647.1 gi|14520264|ref|NP_125739.1| - 0.0029 17.7 0.6 0.0029 17.7 0.6 1.8 2 0 0 2 2 2 1 Family of unknown function (DUF5518) C4bp_oligo PF18453.1 gi|14520264|ref|NP_125739.1| - 0.066 13.4 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha Aminotran_1_2 PF00155.21 gi|14520265|ref|NP_125740.1| - 6.6e-36 124.2 0.0 7.8e-36 124.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II PhosphMutase PF10143.9 gi|14520266|ref|NP_125741.1| - 2.4e-54 183.8 0.0 3.6e-54 183.2 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|14520266|ref|NP_125741.1| - 3.6e-51 173.9 0.0 4.2e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|14520266|ref|NP_125741.1| - 1.5e-09 38.0 0.0 4.9e-08 32.9 0.0 2.1 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|14520266|ref|NP_125741.1| - 0.0032 16.9 0.0 0.083 12.3 0.0 2.3 2 1 0 2 2 2 1 Sulfatase DNA_methylase PF00145.17 gi|14520267|ref|NP_125742.1| - 2.6e-60 204.5 0.0 3.5e-44 151.5 0.0 2.0 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|14520267|ref|NP_125742.1| - 0.00052 19.6 0.0 0.00082 19.0 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Chal_sti_synt_C PF02797.15 gi|14520267|ref|NP_125742.1| - 0.0086 16.1 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 1 Chalcone and stilbene synthases, C-terminal domain Pyr_redox PF00070.27 gi|14520267|ref|NP_125742.1| - 0.12 12.9 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase RNA_pol_L_2 PF13656.6 gi|14520268|ref|NP_125743.1| - 7.1e-20 70.6 0.0 8.9e-20 70.3 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|14520268|ref|NP_125743.1| - 2e-10 39.9 0.0 3.1e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Cadherin_pro PF08758.11 gi|14520268|ref|NP_125743.1| - 0.036 14.2 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 Cadherin prodomain like DUF2067 PF09840.9 gi|14520269|ref|NP_125744.1| - 5.1e-48 163.1 6.4 5.8e-48 162.9 6.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) DUF2236 PF09995.9 gi|14520269|ref|NP_125744.1| - 0.15 12.3 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2236) YusW PF14039.6 gi|14520269|ref|NP_125744.1| - 0.35 11.4 4.0 2.1 8.9 0.5 3.0 2 1 1 3 3 3 0 YusW-like protein ECR1_N PF14382.6 gi|14520270|ref|NP_125745.1| - 4.3e-10 39.2 0.0 9.9e-10 38.1 0.0 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 gi|14520270|ref|NP_125745.1| - 4.7e-07 30.4 2.2 0.00018 22.1 0.2 2.4 1 1 1 2 2 2 2 Exosome component EXOSC1/CSL4 Auto_anti-p27 PF06677.12 gi|14520270|ref|NP_125745.1| - 0.00022 21.3 2.4 0.00036 20.6 2.4 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) S1 PF00575.23 gi|14520270|ref|NP_125745.1| - 0.0019 18.5 0.5 2.6 8.5 0.1 2.6 2 0 0 2 2 2 2 S1 RNA binding domain A2L_zn_ribbon PF08792.10 gi|14520270|ref|NP_125745.1| - 0.0096 15.6 0.2 0.02 14.6 0.2 1.5 1 0 0 1 1 1 1 A2L zinc ribbon domain DZR PF12773.7 gi|14520270|ref|NP_125745.1| - 0.012 15.6 0.6 0.019 15.0 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF2318 PF10080.9 gi|14520270|ref|NP_125745.1| - 0.023 14.8 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Zn_Tnp_IS1595 PF12760.7 gi|14520270|ref|NP_125745.1| - 0.034 14.1 0.1 0.034 14.1 0.1 1.8 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Prok-RING_1 PF14446.6 gi|14520270|ref|NP_125745.1| - 0.045 13.7 0.5 0.094 12.7 0.5 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 OrfB_Zn_ribbon PF07282.11 gi|14520270|ref|NP_125745.1| - 0.08 12.9 0.5 0.18 11.7 0.5 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain NOB1_Zn_bind PF08772.11 gi|14520270|ref|NP_125745.1| - 0.095 12.9 0.7 0.18 12.0 0.7 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|14520270|ref|NP_125745.1| - 0.1 12.3 3.8 0.99 9.2 4.0 2.2 1 1 1 2 2 2 0 zinc-ribbon domain Peptidase_S24 PF00717.23 gi|14520270|ref|NP_125745.1| - 0.16 11.9 1.1 3.3 7.7 1.1 2.9 1 1 0 1 1 1 0 Peptidase S24-like zf-FPG_IleRS PF06827.14 gi|14520270|ref|NP_125745.1| - 0.17 11.7 2.8 0.74 9.7 0.2 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS HypA PF01155.19 gi|14520270|ref|NP_125745.1| - 0.24 11.4 0.9 0.48 10.5 0.9 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|14520270|ref|NP_125745.1| - 0.35 10.4 2.7 1.5 8.4 2.6 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding TRAM PF01938.20 gi|14520270|ref|NP_125745.1| - 0.52 10.3 2.7 26 4.9 0.1 2.8 2 1 1 3 3 3 0 TRAM domain Zn-ribbon_8 PF09723.10 gi|14520270|ref|NP_125745.1| - 0.57 10.4 2.7 1.5 9.0 2.7 1.7 1 1 0 1 1 1 0 Zinc ribbon domain DEAD PF00270.29 gi|14520271|ref|NP_125746.1| - 1.7e-24 86.5 0.0 5.7e-24 84.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|14520271|ref|NP_125746.1| - 4e-15 56.1 0.0 1.3e-14 54.5 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|14520271|ref|NP_125746.1| - 1.3e-07 31.8 0.0 2.4e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HemN_C PF06969.16 gi|14520271|ref|NP_125746.1| - 0.0019 18.2 0.0 0.0056 16.7 0.0 1.9 1 0 0 1 1 1 1 HemN C-terminal domain SNF2_N PF00176.23 gi|14520271|ref|NP_125746.1| - 0.019 13.7 0.0 0.035 12.8 0.0 1.5 1 0 0 1 1 1 0 SNF2 family N-terminal domain SecA_DEAD PF07517.14 gi|14520271|ref|NP_125746.1| - 0.21 10.9 0.0 0.35 10.1 0.0 1.3 1 0 0 1 1 1 0 SecA DEAD-like domain HTH_AsnC-type PF13404.6 gi|14520272|ref|NP_125747.1| - 2.1e-13 49.9 0.2 3.7e-13 49.1 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|14520272|ref|NP_125747.1| - 7.3e-13 47.9 2.1 7.3e-13 47.9 2.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|14520272|ref|NP_125747.1| - 3.5e-09 36.5 0.1 4.2e-08 33.0 0.0 2.2 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|14520272|ref|NP_125747.1| - 1.1e-05 25.3 1.0 3.5e-05 23.7 0.4 2.0 2 1 0 2 2 2 1 HTH domain MarR PF01047.22 gi|14520272|ref|NP_125747.1| - 5.9e-05 22.9 0.2 0.00033 20.5 0.1 2.0 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|14520272|ref|NP_125747.1| - 0.00048 19.9 0.2 0.0032 17.3 0.0 2.1 2 0 0 2 2 2 1 MarR family HTH_Mga PF08280.11 gi|14520272|ref|NP_125747.1| - 0.0014 18.6 0.0 0.0038 17.2 0.0 1.8 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_20 PF12840.7 gi|14520272|ref|NP_125747.1| - 0.0024 17.9 0.0 0.011 15.8 0.0 2.0 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_CodY PF08222.11 gi|14520272|ref|NP_125747.1| - 0.0061 16.1 0.5 0.023 14.3 0.2 2.1 2 1 0 2 2 2 1 CodY helix-turn-helix domain DDRGK PF09756.9 gi|14520272|ref|NP_125747.1| - 0.015 14.9 0.5 0.028 14.0 0.2 1.5 2 0 0 2 2 2 0 DDRGK domain LexA_DNA_bind PF01726.16 gi|14520272|ref|NP_125747.1| - 0.021 14.6 0.1 0.039 13.7 0.1 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_WhiA PF02650.14 gi|14520272|ref|NP_125747.1| - 0.023 15.0 0.1 0.06 13.7 0.1 1.7 1 0 0 1 1 1 0 WhiA C-terminal HTH domain HTH_Crp_2 PF13545.6 gi|14520272|ref|NP_125747.1| - 0.028 14.4 0.3 0.61 10.1 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14520272|ref|NP_125747.1| - 0.031 13.8 0.2 0.085 12.4 0.2 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_19 PF12844.7 gi|14520272|ref|NP_125747.1| - 0.042 13.9 0.5 0.11 12.5 0.5 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 gi|14520272|ref|NP_125747.1| - 0.047 13.7 1.4 0.065 13.3 0.3 1.9 2 0 0 2 2 2 0 Helix-turn-helix HTH_10 PF04967.12 gi|14520272|ref|NP_125747.1| - 0.065 13.0 0.3 0.35 10.7 0.1 2.0 2 0 0 2 2 2 0 HTH DNA binding domain HTH_5 PF01022.20 gi|14520272|ref|NP_125747.1| - 0.066 13.1 0.1 0.16 11.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|14520272|ref|NP_125747.1| - 0.068 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF4423 PF14394.6 gi|14520272|ref|NP_125747.1| - 0.072 12.8 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HemN_C PF06969.16 gi|14520272|ref|NP_125747.1| - 0.078 13.1 0.0 0.32 11.1 0.0 1.9 2 0 0 2 2 2 0 HemN C-terminal domain Ribosomal_S25 PF03297.15 gi|14520272|ref|NP_125747.1| - 0.1 12.8 0.2 0.24 11.6 0.2 1.5 1 0 0 1 1 1 0 S25 ribosomal protein Syntaxin-18_N PF10496.9 gi|14520272|ref|NP_125747.1| - 0.16 12.2 0.1 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus TrmB PF01978.19 gi|14520273|ref|NP_125748.1| - 1.8e-10 40.6 0.2 3.4e-10 39.7 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|14520273|ref|NP_125748.1| - 1.4e-05 24.7 1.7 2.4e-05 24.0 1.7 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_24 PF13412.6 gi|14520273|ref|NP_125748.1| - 4.2e-05 23.0 2.5 4.2e-05 23.0 2.5 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|14520273|ref|NP_125748.1| - 0.00016 21.2 0.9 0.00023 20.6 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_IclR PF09339.10 gi|14520273|ref|NP_125748.1| - 0.00021 21.0 0.6 0.00072 19.3 0.3 2.0 1 1 1 2 2 2 1 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|14520273|ref|NP_125748.1| - 0.00024 20.7 0.2 0.00055 19.6 0.2 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 PaaX PF07848.12 gi|14520273|ref|NP_125748.1| - 0.00079 19.6 0.9 0.0062 16.7 0.4 2.1 1 1 1 2 2 2 1 PaaX-like protein HTH_28 PF13518.6 gi|14520273|ref|NP_125748.1| - 0.0012 18.9 0.5 0.0027 17.8 0.5 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|14520273|ref|NP_125748.1| - 0.0013 18.8 0.5 0.0031 17.5 0.4 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|14520273|ref|NP_125748.1| - 0.003 17.5 0.6 0.003 17.5 0.6 2.1 2 1 1 3 3 3 1 HTH domain HTH_40 PF14493.6 gi|14520273|ref|NP_125748.1| - 0.0031 17.9 0.3 0.011 16.2 0.2 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain FaeA PF04703.12 gi|14520273|ref|NP_125748.1| - 0.0053 17.1 0.4 0.012 15.9 0.4 1.7 1 1 0 1 1 1 1 FaeA-like protein TFIIE_alpha PF02002.17 gi|14520273|ref|NP_125748.1| - 0.0058 16.5 4.1 0.034 14.0 0.3 2.2 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_36 PF13730.6 gi|14520273|ref|NP_125748.1| - 0.0098 15.8 4.6 0.28 11.2 0.0 3.3 3 1 1 4 4 4 1 Helix-turn-helix domain HTH_Mga PF08280.11 gi|14520273|ref|NP_125748.1| - 0.017 15.2 0.5 0.048 13.7 0.0 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain Penicillinase_R PF03965.16 gi|14520273|ref|NP_125748.1| - 0.033 14.5 0.1 0.055 13.8 0.1 1.4 1 1 0 1 1 1 0 Penicillinase repressor RPA_C PF08784.11 gi|14520273|ref|NP_125748.1| - 0.033 14.8 0.0 0.056 14.1 0.0 1.5 1 0 0 1 1 1 0 Replication protein A C terminal MarR_2 PF12802.7 gi|14520273|ref|NP_125748.1| - 0.037 13.9 0.4 0.057 13.3 0.4 1.4 1 0 0 1 1 1 0 MarR family NUMOD1 PF07453.13 gi|14520273|ref|NP_125748.1| - 0.044 14.1 0.1 2.7 8.4 0.0 2.9 3 0 0 3 3 3 0 NUMOD1 domain LexA_DNA_bind PF01726.16 gi|14520273|ref|NP_125748.1| - 0.045 13.5 0.3 0.045 13.5 0.3 2.1 3 0 0 3 3 3 0 LexA DNA binding domain HTH_9 PF08221.11 gi|14520273|ref|NP_125748.1| - 0.076 13.1 0.3 2.5 8.3 0.0 2.7 2 1 1 3 3 3 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR PF01047.22 gi|14520273|ref|NP_125748.1| - 0.18 11.7 0.2 0.18 11.7 0.2 2.4 3 0 0 3 3 3 0 MarR family HTH_5 PF01022.20 gi|14520273|ref|NP_125748.1| - 0.21 11.5 0.1 0.21 11.5 0.1 2.1 3 0 0 3 3 2 0 Bacterial regulatory protein, arsR family CRR7 PF12095.8 gi|14520273|ref|NP_125748.1| - 0.32 11.5 2.3 2.8 8.5 0.2 2.2 2 0 0 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 HTH_19 PF12844.7 gi|14520273|ref|NP_125748.1| - 0.45 10.6 7.5 1.6 8.8 0.3 2.8 2 1 0 2 2 2 0 Helix-turn-helix domain Cupin_2 PF07883.11 gi|14520274|ref|NP_125749.1| - 2e-17 62.7 0.2 2.9e-17 62.1 0.2 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|14520274|ref|NP_125749.1| - 7.9e-08 32.3 0.1 1.2e-07 31.7 0.1 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|14520274|ref|NP_125749.1| - 7.3e-05 22.4 0.0 0.00011 21.9 0.0 1.2 1 0 0 1 1 1 1 Cupin Auxin_BP PF02041.16 gi|14520274|ref|NP_125749.1| - 0.00024 20.8 0.0 0.00042 20.0 0.0 1.5 1 1 0 1 1 1 1 Auxin binding protein DMSP_lyase PF16867.5 gi|14520274|ref|NP_125749.1| - 0.00044 19.9 0.4 0.00066 19.4 0.4 1.2 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase MannoseP_isomer PF01050.18 gi|14520274|ref|NP_125749.1| - 0.0016 18.4 0.0 0.0018 18.1 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_7 PF12973.7 gi|14520274|ref|NP_125749.1| - 0.0053 16.7 0.1 0.0085 16.0 0.1 1.4 1 0 0 1 1 1 1 ChrR Cupin-like domain Cupin_3 PF05899.12 gi|14520274|ref|NP_125749.1| - 0.0075 15.9 0.1 0.011 15.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Ectoine_synth PF06339.12 gi|14520274|ref|NP_125749.1| - 0.0099 16.1 0.0 0.012 15.8 0.0 1.1 1 0 0 1 1 1 1 Ectoine synthase PCO_ADO PF07847.12 gi|14520274|ref|NP_125749.1| - 0.1 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 PCO_ADO Peptidase_M28 PF04389.17 gi|14520275|ref|NP_125750.1| - 1.1e-19 70.9 0.0 2.1e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 DUF4910 PF16254.5 gi|14520275|ref|NP_125750.1| - 4.9e-11 42.0 0.0 1.1e-09 37.6 0.0 2.7 2 1 1 3 3 3 1 Domain of unknown function (DUF4910) PA PF02225.22 gi|14520275|ref|NP_125750.1| - 1e-05 25.4 0.0 2.3e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 PA domain SAM_Exu PF18609.1 gi|14520275|ref|NP_125750.1| - 4.7 7.4 6.0 26 5.0 2.4 2.8 2 1 0 2 2 2 0 Exuperantia SAM-like domain Glycos_transf_2 PF00535.26 gi|14520276|ref|NP_125751.1| - 1.1e-34 119.7 0.1 1.6e-34 119.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 gi|14520276|ref|NP_125751.1| - 3.6e-26 91.7 10.1 5.1e-26 91.2 10.1 1.2 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 gi|14520276|ref|NP_125751.1| - 2.4e-10 40.7 0.0 3.1e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|14520276|ref|NP_125751.1| - 3.7e-05 23.3 0.0 5.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|14520276|ref|NP_125751.1| - 0.028 13.9 0.0 0.058 12.9 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 21 Glyco_transf_7N PF13733.6 gi|14520276|ref|NP_125751.1| - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 PAP2 PF01569.21 gi|14520276|ref|NP_125751.1| - 0.51 10.1 4.8 0.84 9.4 4.8 1.3 1 0 0 1 1 1 0 PAP2 superfamily Fibrillarin PF01269.17 gi|14520277|ref|NP_125752.1| - 9.2e-102 339.0 0.0 1.1e-101 338.7 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin PCMT PF01135.19 gi|14520277|ref|NP_125752.1| - 1.2e-05 25.2 0.0 1.4e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GCD14 PF08704.10 gi|14520277|ref|NP_125752.1| - 0.012 15.3 0.0 0.025 14.2 0.0 1.4 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit FtsJ PF01728.19 gi|14520277|ref|NP_125752.1| - 0.086 12.9 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase TehB PF03848.14 gi|14520277|ref|NP_125752.1| - 0.16 11.3 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Nop PF01798.18 gi|14520278|ref|NP_125753.1| - 9.6e-72 241.2 0.0 1.3e-71 240.7 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Coilin_N PF15862.5 gi|14520278|ref|NP_125753.1| - 0.019 14.8 3.2 0.14 11.9 1.6 2.2 2 0 0 2 2 2 0 Coilin N-terminus MerR-DNA-bind PF09278.11 gi|14520278|ref|NP_125753.1| - 0.4 11.2 5.1 0.63 10.6 0.4 3.2 2 0 0 2 2 2 0 MerR, DNA binding SUV3_C PF12513.8 gi|14520278|ref|NP_125753.1| - 1.3 9.1 3.9 23 5.0 0.1 3.3 3 0 0 3 3 3 0 Mitochondrial degradasome RNA helicase subunit C terminal ATPase_2 PF01637.18 gi|14520279|ref|NP_125754.1| - 1.8e-27 96.8 0.1 2.3e-27 96.4 0.1 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14520279|ref|NP_125754.1| - 1.2e-08 35.1 0.0 3.8e-07 30.2 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14520279|ref|NP_125754.1| - 8.9e-07 29.4 0.1 1.6e-06 28.6 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520279|ref|NP_125754.1| - 7.2e-06 26.3 0.1 4e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain TrmB PF01978.19 gi|14520279|ref|NP_125754.1| - 0.051 13.5 0.0 0.17 11.8 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RelB_N PF18506.1 gi|14520279|ref|NP_125754.1| - 0.078 12.8 0.5 0.31 10.9 0.5 2.0 1 0 0 1 1 1 0 RelB Antitoxin alpha helical domain RsgA_GTPase PF03193.16 gi|14520279|ref|NP_125754.1| - 0.17 11.8 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase PALP PF00291.25 gi|14520280|ref|NP_125755.1| - 3.4e-41 141.6 0.1 3.9e-41 141.4 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Methyltransf_32 PF13679.6 gi|14520280|ref|NP_125755.1| - 0.031 14.3 0.1 0.1 12.6 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain ThiF PF00899.21 gi|14520281|ref|NP_125756.1| - 1.5e-58 198.1 0.0 1.8e-58 197.8 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 gi|14520281|ref|NP_125756.1| - 0.0082 16.4 0.0 0.021 15.1 0.0 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DAO PF01266.24 gi|14520281|ref|NP_125756.1| - 0.014 15.0 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Shikimate_DH PF01488.20 gi|14520281|ref|NP_125756.1| - 0.019 15.1 0.1 0.071 13.2 0.0 2.0 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 gi|14520281|ref|NP_125756.1| - 0.021 14.5 0.1 0.036 13.7 0.1 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 gi|14520281|ref|NP_125756.1| - 0.023 14.0 0.1 0.057 12.8 0.0 1.7 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|14520281|ref|NP_125756.1| - 0.029 14.8 0.0 0.056 13.9 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|14520281|ref|NP_125756.1| - 0.091 12.3 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Ldh_1_N PF00056.23 gi|14520281|ref|NP_125756.1| - 0.094 12.8 1.7 0.25 11.5 0.1 2.3 3 0 0 3 3 3 0 lactate/malate dehydrogenase, NAD binding domain HIT PF01230.23 gi|14520282|ref|NP_125757.1| - 1.1e-15 58.2 0.0 1.7e-15 57.6 0.0 1.3 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|14520282|ref|NP_125757.1| - 1.6e-08 35.0 0.0 2.8e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|14520282|ref|NP_125757.1| - 7.9e-05 22.5 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Ribosomal_S13_N PF08069.12 gi|14520283|ref|NP_125758.1| - 9.1e-28 96.1 0.3 1.8e-27 95.2 0.1 1.6 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|14520283|ref|NP_125758.1| - 8.2e-20 70.8 1.5 8.6e-20 70.7 0.7 1.4 2 0 0 2 2 2 1 Ribosomal protein S15 MerR_1 PF13411.6 gi|14520283|ref|NP_125758.1| - 0.029 14.5 0.1 0.79 9.9 0.0 2.6 2 0 0 2 2 2 0 MerR HTH family regulatory protein DHHA1 PF02272.19 gi|14520284|ref|NP_125759.1| - 3.3e-22 79.4 1.2 3.3e-22 79.4 1.2 2.0 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|14520284|ref|NP_125759.1| - 0.00038 20.7 0.1 0.0007 19.8 0.1 1.4 1 0 0 1 1 1 1 DHH family Glyco_transf_4 PF13439.6 gi|14520284|ref|NP_125759.1| - 0.057 13.4 0.1 0.13 12.2 0.1 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Pcc1 PF09341.10 gi|298204368|ref|YP_003717782.1| - 0.013 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 Ribosomal_S3Ae PF01015.18 gi|14520285|ref|NP_125760.1| - 2.2e-70 236.4 2.8 2.6e-70 236.1 2.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Intein_splicing PF14890.6 gi|14520285|ref|NP_125760.1| - 0.035 14.0 1.8 2.1 8.3 0.9 2.6 1 1 1 2 2 2 0 Intein splicing domain HTH_24 PF13412.6 gi|14520286|ref|NP_125761.1| - 9.2e-11 41.1 2.4 1.7e-10 40.3 2.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|14520286|ref|NP_125761.1| - 2.8e-10 39.8 1.3 4.3e-10 39.3 1.3 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14520286|ref|NP_125761.1| - 4.8e-08 32.9 0.2 9.5e-08 31.9 0.2 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_Mga PF08280.11 gi|14520286|ref|NP_125761.1| - 4.4e-06 26.6 0.6 8.8e-06 25.7 0.6 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_11 PF08279.12 gi|14520286|ref|NP_125761.1| - 2.1e-05 24.4 0.6 4e-05 23.5 0.6 1.6 1 0 0 1 1 1 1 HTH domain AsnC_trans_reg PF01037.21 gi|14520286|ref|NP_125761.1| - 0.0006 19.7 0.1 0.0012 18.7 0.1 1.5 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR PF01047.22 gi|14520286|ref|NP_125761.1| - 0.0011 18.8 0.6 0.0027 17.6 0.6 1.6 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|14520286|ref|NP_125761.1| - 0.0012 19.0 0.2 0.003 17.7 0.2 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|14520286|ref|NP_125761.1| - 0.0018 18.1 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|14520286|ref|NP_125761.1| - 0.01 16.1 0.5 0.022 15.1 0.2 1.8 2 0 0 2 2 1 0 Transcriptional regulator TrmB PF01978.19 gi|14520286|ref|NP_125761.1| - 0.012 15.4 2.4 0.04 13.8 0.2 2.6 2 1 2 4 4 4 0 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 gi|14520286|ref|NP_125761.1| - 0.02 15.0 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14520286|ref|NP_125761.1| - 0.035 13.6 0.4 0.075 12.6 0.4 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Replic_Relax PF13814.6 gi|14520286|ref|NP_125761.1| - 0.037 14.1 0.1 0.049 13.7 0.1 1.2 1 0 0 1 1 1 0 Replication-relaxation HTH_DeoR PF08220.12 gi|14520286|ref|NP_125761.1| - 0.04 13.7 1.4 0.097 12.4 1.4 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain DUF2129 PF09902.9 gi|14520286|ref|NP_125761.1| - 0.062 13.4 2.2 11 6.2 0.1 3.1 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2129) HTH_5 PF01022.20 gi|14520286|ref|NP_125761.1| - 0.084 12.7 0.1 0.23 11.3 0.1 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|14520286|ref|NP_125761.1| - 0.1 13.1 0.4 0.23 12.0 0.2 1.7 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|14520286|ref|NP_125761.1| - 0.1 12.5 0.3 0.19 11.7 0.3 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|14520286|ref|NP_125761.1| - 0.14 12.2 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_WhiA PF02650.14 gi|14520286|ref|NP_125761.1| - 0.15 12.4 0.7 0.15 12.4 0.7 2.2 3 0 0 3 3 3 0 WhiA C-terminal HTH domain MazG PF03819.17 gi|14520287|ref|NP_125762.1| - 9.8e-17 60.9 0.1 1.1e-16 60.8 0.1 1.0 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain dUTPase_2 PF08761.11 gi|14520287|ref|NP_125762.1| - 0.00088 19.5 0.0 0.001 19.3 0.0 1.0 1 0 0 1 1 1 1 dUTPase MazG-like PF12643.7 gi|14520287|ref|NP_125762.1| - 0.022 15.0 0.2 0.032 14.5 0.2 1.3 1 1 0 1 1 1 0 MazG-like family Csd3_N PF18059.1 gi|14520287|ref|NP_125762.1| - 0.066 13.7 0.0 0.086 13.4 0.0 1.3 1 1 0 1 1 1 0 Csd3 N-terminal PRA-PH PF01503.17 gi|14520287|ref|NP_125762.1| - 0.094 13.2 0.3 0.13 12.8 0.3 1.1 1 0 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase HTH_5 PF01022.20 gi|14520288|ref|NP_125763.1| - 5.7e-13 48.5 1.5 2.4e-12 46.5 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14520288|ref|NP_125763.1| - 8.9e-12 44.9 0.0 1.5e-11 44.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain ArsR PF09824.9 gi|14520288|ref|NP_125763.1| - 0.0049 16.5 0.1 0.0092 15.6 0.1 1.6 1 1 0 1 1 1 1 ArsR transcriptional regulator RNase_H2-Ydr279 PF09468.10 gi|14520288|ref|NP_125763.1| - 0.036 14.2 0.2 0.054 13.7 0.2 1.4 1 1 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain HTH_27 PF13463.6 gi|14520288|ref|NP_125763.1| - 0.044 14.3 0.3 0.18 12.3 0.1 2.0 2 1 0 2 2 2 0 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|14520288|ref|NP_125763.1| - 0.047 13.4 0.0 0.07 12.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2666 PF10869.8 gi|14520289|ref|NP_125764.1| - 7.2e-43 146.0 9.1 7e-38 129.9 1.2 2.6 2 1 0 2 2 2 2 Protein of unknown function (DUF2666) PrsW-protease PF13367.6 gi|14520290|ref|NP_125765.1| - 1.6e-31 109.3 14.6 2.2e-31 108.8 14.6 1.2 1 0 0 1 1 1 1 PrsW family intramembrane metalloprotease YhfC PF10086.9 gi|14520290|ref|NP_125765.1| - 0.00032 20.1 3.7 0.00032 20.1 3.7 2.4 2 1 0 2 2 2 1 YhfC intramembrane metalloprotease DUF3147 PF11345.8 gi|14520290|ref|NP_125765.1| - 0.019 15.3 1.6 0.019 15.3 1.6 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3147) Asparaginase PF00710.20 gi|14520291|ref|NP_125766.1| - 3.9e-58 196.2 0.0 6.3e-58 195.5 0.0 1.3 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|14520291|ref|NP_125766.1| - 3e-31 108.0 0.0 6.3e-31 107.0 0.0 1.5 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain DUF4152 PF13680.6 gi|14520292|ref|NP_125767.1| - 6.3e-122 405.1 0.6 7e-122 405.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4152) Glyco_transf_5 PF08323.11 gi|14520294|ref|NP_125769.1| - 1.2e-33 116.9 0.0 2.5e-33 115.8 0.0 1.5 1 0 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|14520294|ref|NP_125769.1| - 5.3e-28 97.7 0.0 1.3e-27 96.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14520294|ref|NP_125769.1| - 2.9e-27 95.7 0.0 5.3e-27 94.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|14520294|ref|NP_125769.1| - 1.1e-17 64.6 0.1 6.5e-17 62.0 0.1 2.2 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|14520294|ref|NP_125769.1| - 1.4e-12 48.3 0.0 3.5e-12 47.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glycogen_syn PF05693.13 gi|14520294|ref|NP_125769.1| - 6.8e-05 21.6 0.0 0.57 8.7 0.0 3.1 3 0 0 3 3 3 3 Glycogen synthase Glyco_trans_1_2 PF13524.6 gi|14520294|ref|NP_125769.1| - 7.1e-05 23.1 0.0 0.00013 22.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|14520294|ref|NP_125769.1| - 8.3e-05 22.6 0.1 0.018 15.1 0.2 2.8 2 1 0 2 2 2 1 Glycosyl transferase 4-like EamA PF00892.20 gi|14520295|ref|NP_125770.1| - 1.1e-51 174.7 41.0 8.5e-27 94.0 11.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|14520295|ref|NP_125770.1| - 2.3e-15 56.7 21.9 2.1e-09 37.1 11.8 2.0 1 1 1 2 2 2 2 Triose-phosphate Transporter family UAA PF08449.11 gi|14520295|ref|NP_125770.1| - 0.001 18.4 25.5 0.008 15.4 4.0 2.8 2 2 0 2 2 2 2 UAA transporter family TMEM234 PF10639.9 gi|14520295|ref|NP_125770.1| - 0.02 14.9 16.5 0.082 12.9 1.5 3.1 3 1 0 3 3 3 0 Putative transmembrane family 234 DUF99 PF01949.16 gi|33356665|ref|NP_125771.2| - 1.2e-60 204.1 0.8 1.4e-60 203.9 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 NTP_transf_3 PF12804.7 gi|14520297|ref|NP_125772.1| - 1e-07 32.4 0.0 1.4e-07 32.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fungal_TACC PF12709.7 gi|14520297|ref|NP_125772.1| - 0.11 13.0 0.2 4.7 7.7 0.1 2.2 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins NYN PF01936.18 gi|14520298|ref|NP_125773.1| - 1.2e-18 68.0 0.0 1.6e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 NYN domain NYN PF01936.18 gi|14520299|ref|NP_125774.1| - 8.3e-23 81.5 0.0 1e-22 81.2 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.13 gi|14520299|ref|NP_125774.1| - 0.01 15.5 0.4 0.45 10.2 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF460) CobA_CobO_BtuR PF02572.15 gi|14520300|ref|NP_125775.1| - 1.2e-64 217.7 0.1 1.3e-64 217.6 0.1 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RecA PF00154.21 gi|14520300|ref|NP_125775.1| - 0.003 17.1 0.0 0.004 16.7 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Gly_rich_SFCGS PF14272.6 gi|14520300|ref|NP_125775.1| - 0.0073 16.3 0.3 0.016 15.2 0.3 1.6 1 1 0 1 1 1 1 Glycine-rich SFCGS AAA_30 PF13604.6 gi|14520300|ref|NP_125775.1| - 0.018 14.7 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|14520300|ref|NP_125775.1| - 0.032 13.8 0.3 4.8 6.7 0.1 2.2 2 0 0 2 2 2 0 AAA domain Trm56 PF01994.16 gi|14520300|ref|NP_125775.1| - 0.13 12.2 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 tRNA ribose 2'-O-methyltransferase, aTrm56 IstB_IS21 PF01695.17 gi|14520300|ref|NP_125775.1| - 0.17 11.6 0.2 11 5.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_31 PF13614.6 gi|14520300|ref|NP_125775.1| - 0.44 10.4 1.1 1.4 8.8 0.4 1.9 2 1 0 2 2 2 0 AAA domain DUF835 PF05763.12 gi|14520301|ref|NP_125776.1| - 5.2e-35 120.1 0.5 1e-34 119.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF835) UPF0542 PF15086.6 gi|14520301|ref|NP_125776.1| - 0.014 15.3 3.8 0.026 14.4 0.8 2.7 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 DUF1772 PF08592.11 gi|14520301|ref|NP_125776.1| - 0.04 14.2 3.1 0.067 13.5 3.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) DUF1218 PF06749.12 gi|14520301|ref|NP_125776.1| - 0.04 14.4 1.8 0.068 13.7 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Tfb5 PF06331.12 gi|14520301|ref|NP_125776.1| - 0.073 13.1 0.1 1.3 9.1 0.1 2.3 2 0 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 Baculo_11_kDa PF06143.11 gi|14520301|ref|NP_125776.1| - 1.6 8.3 6.9 6.6 6.4 0.6 2.5 2 0 0 2 2 2 0 Baculovirus 11 kDa family Tetraspanin PF00335.20 gi|14520301|ref|NP_125776.1| - 4.3 7.0 8.3 11 5.7 2.3 2.2 1 1 1 2 2 2 0 Tetraspanin family PGG PF13962.6 gi|14520301|ref|NP_125776.1| - 7.9 6.3 9.6 5.2 6.9 5.5 2.1 1 1 1 2 2 2 0 Domain of unknown function Peptidase_S58 PF03576.14 gi|14520302|ref|NP_125777.1| - 4e-117 391.0 0.8 4.5e-117 390.8 0.8 1.0 1 0 0 1 1 1 1 Peptidase family S58 SPOUT_MTase_2 PF14419.6 gi|14520303|ref|NP_125778.1| - 8.4e-83 275.9 0.5 1.6e-82 275.0 0.1 1.6 2 0 0 2 2 2 1 AF2226-like SPOUT RNA Methylase fused to THUMP THUMP PF02926.17 gi|14520303|ref|NP_125778.1| - 6.5e-31 107.4 4.0 7.4e-31 107.2 2.2 2.0 2 0 0 2 2 2 1 THUMP domain Methyltrn_RNA_4 PF09936.9 gi|14520303|ref|NP_125778.1| - 0.022 14.6 0.0 0.096 12.5 0.0 1.8 2 0 0 2 2 2 0 SAM-dependent RNA methyltransferase Spt5-NGN PF03439.13 gi|14520303|ref|NP_125778.1| - 0.049 13.5 0.1 0.16 11.9 0.1 2.0 1 1 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section DinI PF06183.13 gi|14520303|ref|NP_125778.1| - 0.064 13.6 0.0 0.99 9.8 0.0 2.7 2 1 1 3 3 3 0 DinI-like family MobB PF03205.14 gi|14520304|ref|NP_125779.1| - 1.2e-20 73.7 0.4 3e-20 72.5 0.4 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B FeS PF04060.13 gi|14520304|ref|NP_125779.1| - 1.6e-08 34.1 0.5 2.7e-08 33.3 0.5 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster SRP54 PF00448.22 gi|14520304|ref|NP_125779.1| - 7.4e-05 22.5 0.4 0.00013 21.6 0.4 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|14520304|ref|NP_125779.1| - 0.00074 18.6 0.2 0.0016 17.5 0.1 1.6 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 gi|14520304|ref|NP_125779.1| - 0.00087 19.3 0.0 0.0013 18.8 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Sulfatase PF00884.23 gi|14520304|ref|NP_125779.1| - 0.001 18.5 0.0 0.0014 18.1 0.0 1.1 1 0 0 1 1 1 1 Sulfatase AAA_26 PF13500.6 gi|14520304|ref|NP_125779.1| - 0.0041 17.0 0.3 0.028 14.2 0.3 2.1 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|14520304|ref|NP_125779.1| - 0.013 15.5 0.1 0.034 14.0 0.0 1.8 2 0 0 2 2 2 0 NTPase KTI12 PF08433.10 gi|14520304|ref|NP_125779.1| - 0.015 14.8 0.0 0.029 13.8 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 CBS PF00571.28 gi|14520304|ref|NP_125779.1| - 0.018 15.5 0.1 3.1 8.3 0.0 2.8 2 1 0 2 2 2 0 CBS domain Thymidylate_kin PF02223.17 gi|14520304|ref|NP_125779.1| - 0.029 14.0 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 Thymidylate kinase cobW PF02492.19 gi|14520304|ref|NP_125779.1| - 0.074 12.6 0.2 0.4 10.2 0.0 2.2 2 1 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|14520304|ref|NP_125779.1| - 0.16 11.8 0.9 0.27 11.1 0.1 1.8 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea Glyco_tran_WbsX PF14307.6 gi|14520305|ref|NP_125780.1| - 3.8e-06 26.6 1.1 9.7e-06 25.3 0.1 2.1 2 1 0 2 2 2 1 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 gi|14520305|ref|NP_125780.1| - 4e-06 26.2 0.0 0.0021 17.3 0.0 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 99 DUF4945 PF16303.5 gi|14520305|ref|NP_125780.1| - 0.068 13.1 0.5 0.17 11.8 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4945) ChitinaseA_N PF08329.10 gi|14520305|ref|NP_125780.1| - 0.077 12.6 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Chitinase A, N-terminal domain DUF4139 PF13598.6 gi|14520305|ref|NP_125780.1| - 0.27 10.9 4.0 0.46 10.2 4.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) Glyco_hydro_71 PF03659.14 gi|14520305|ref|NP_125780.1| - 0.75 8.5 3.3 0.23 10.3 0.1 1.8 2 0 0 2 2 2 0 Glycosyl hydrolase family 71 DeoC PF01791.9 gi|14520306|ref|NP_125781.1| - 1.6e-37 129.4 0.0 1.8e-37 129.2 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PucR PF07905.11 gi|14520306|ref|NP_125781.1| - 0.00037 20.8 0.0 0.74 10.1 0.0 2.7 2 1 1 3 3 3 2 Purine catabolism regulatory protein-like family Peripla_BP_4 PF13407.6 gi|14520306|ref|NP_125781.1| - 0.0016 18.1 0.2 0.0027 17.3 0.2 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain AP_endonuc_2 PF01261.24 gi|14520306|ref|NP_125781.1| - 0.013 15.0 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Pilus_CpaD PF09476.10 gi|14520306|ref|NP_125781.1| - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Arginase PF00491.21 gi|14520307|ref|NP_125782.1| - 3.8e-61 207.1 0.0 4.6e-61 206.8 0.0 1.0 1 0 0 1 1 1 1 Arginase family 2-Hacid_dh PF00389.30 gi|14520307|ref|NP_125782.1| - 0.17 11.6 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THUMP PF02926.17 gi|33356667|ref|NP_125783.2| - 8.8e-25 87.5 1.0 1e-24 87.3 1.0 1.0 1 0 0 1 1 1 1 THUMP domain QueC PF06508.13 gi|14520309|ref|NP_125784.1| - 3.6e-61 206.3 0.0 4.5e-61 206.0 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|14520309|ref|NP_125784.1| - 3.8e-07 30.0 0.0 9.2e-05 22.3 0.0 2.1 2 0 0 2 2 2 2 PP-loop family ThiI PF02568.14 gi|14520309|ref|NP_125784.1| - 6.8e-06 25.8 0.0 0.018 14.7 0.0 2.2 2 0 0 2 2 2 2 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.19 gi|14520309|ref|NP_125784.1| - 0.00036 20.6 0.0 0.0007 19.7 0.0 1.5 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Diphthami_syn_2 PF01902.17 gi|14520309|ref|NP_125784.1| - 0.00056 19.5 0.0 0.001 18.6 0.0 1.5 1 0 0 1 1 1 1 Diphthamide synthase Arginosuc_synth PF00764.19 gi|14520309|ref|NP_125784.1| - 0.0023 17.3 0.0 0.0033 16.8 0.0 1.2 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.21 gi|14520309|ref|NP_125784.1| - 0.055 13.1 0.0 0.082 12.6 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase tRNA_Me_trans PF03054.16 gi|14520309|ref|NP_125784.1| - 0.098 11.4 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase Regulator_TrmB PF11495.8 gi|14520311|ref|NP_125786.1| - 7.3e-06 25.3 1.3 1.1e-05 24.7 1.3 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Hypoth_Ymh PF09509.10 gi|14520311|ref|NP_125786.1| - 0.022 14.6 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) O_anti_polymase PF01901.16 gi|14520312|ref|NP_125787.1| - 1.7e-55 188.6 28.9 2.3e-55 188.2 28.9 1.2 1 0 0 1 1 1 1 Putative O-antigen polymerase Oleosin PF01277.17 gi|14520312|ref|NP_125787.1| - 0.069 12.9 0.1 0.069 12.9 0.1 3.4 3 0 0 3 3 3 0 Oleosin PetG PF02529.15 gi|14520312|ref|NP_125787.1| - 0.21 11.5 7.9 12 5.8 0.1 3.8 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 PMT_2 PF13231.6 gi|14520314|ref|NP_125789.1| - 2.3e-18 66.9 17.7 2.3e-18 66.9 17.7 2.3 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 gi|14520314|ref|NP_125789.1| - 1e-08 35.1 13.3 1e-08 35.1 13.3 1.9 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2079 PF09852.9 gi|14520314|ref|NP_125789.1| - 7.1e-05 21.8 20.2 0.0001 21.3 20.2 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) DUF2723 PF11028.8 gi|14520314|ref|NP_125789.1| - 1.8 8.4 11.7 0.34 10.8 7.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2723) PPDK_N PF01326.19 gi|14520315|ref|NP_125790.1| - 8e-115 383.6 5.1 2.1e-114 382.2 5.1 1.7 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|14520315|ref|NP_125790.1| - 4.2e-100 334.7 0.1 7.7e-100 333.8 0.1 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|14520315|ref|NP_125790.1| - 2.7e-29 100.7 1.2 8.1e-29 99.2 1.2 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain FliS PF02561.14 gi|14520315|ref|NP_125790.1| - 0.11 12.8 0.1 0.3 11.4 0.1 1.8 1 0 0 1 1 1 0 Flagellar protein FliS Amidohydro_2 PF04909.14 gi|14520316|ref|NP_125791.1| - 4e-28 99.1 0.2 9.6e-28 97.8 0.2 1.6 1 1 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|14520316|ref|NP_125791.1| - 0.00047 19.6 0.0 0.0071 15.7 0.0 2.0 2 0 0 2 2 2 1 TatD related DNase Radical_SAM PF04055.21 gi|14520317|ref|NP_125792.1| - 7.8e-27 94.7 0.1 4.5e-26 92.2 0.0 2.4 3 0 0 3 3 3 1 Radical SAM superfamily HHH_3 PF12836.7 gi|14520317|ref|NP_125792.1| - 0.00025 21.2 0.1 0.0086 16.3 0.0 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix motif Pribosyltran PF00156.27 gi|14520318|ref|NP_125793.1| - 3.2e-31 108.0 0.2 4e-31 107.7 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|14520318|ref|NP_125793.1| - 4.1e-05 23.1 0.0 5.2e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyl_synth PF14572.6 gi|14520318|ref|NP_125793.1| - 0.0071 16.4 0.5 0.0079 16.2 0.5 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain NmrA PF05368.13 gi|14520318|ref|NP_125793.1| - 0.045 13.3 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 NmrA-like family PRTase_2 PF15609.6 gi|14520318|ref|NP_125793.1| - 0.057 12.9 0.0 0.087 12.3 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase LigT_PEase PF02834.16 gi|14520320|ref|NP_125795.1| - 2.4e-38 130.2 0.5 8.3e-21 74.0 0.1 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|14520320|ref|NP_125795.1| - 7.5e-19 68.1 0.0 9.4e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|14520320|ref|NP_125795.1| - 1.9e-17 63.9 0.0 2.3e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain RBFA PF02033.18 gi|14520320|ref|NP_125795.1| - 0.0046 17.4 0.1 0.034 14.6 0.1 2.2 1 1 0 1 1 1 1 Ribosome-binding factor A PG_binding_2 PF08823.11 gi|14520320|ref|NP_125795.1| - 0.074 13.4 0.5 0.57 10.5 0.0 2.6 3 1 1 4 4 4 0 Putative peptidoglycan binding domain tRNA_NucTransf2 PF09249.11 gi|14520321|ref|NP_125796.1| - 9e-39 132.2 0.0 1.6e-38 131.4 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|14520321|ref|NP_125796.1| - 1.9e-11 44.1 1.5 4.3e-11 42.9 0.1 2.3 2 1 0 2 2 2 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|14520321|ref|NP_125796.1| - 0.00021 21.5 0.0 0.00039 20.6 0.0 1.5 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain OAS1_C PF10421.9 gi|14520321|ref|NP_125796.1| - 0.0055 16.2 0.0 0.0088 15.6 0.0 1.2 1 0 0 1 1 1 1 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus GATase_4 PF13230.6 gi|33356668|ref|NP_125797.2| - 1.5e-08 33.9 0.0 2.3e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|33356668|ref|NP_125797.2| - 3e-05 24.2 0.0 0.00017 21.8 0.0 2.0 1 1 1 2 2 2 1 Glutamine amidotransferase domain HSDR_N PF04313.14 gi|14520323|ref|NP_125798.1| - 4.3e-12 46.4 0.1 2.1e-06 27.8 0.1 2.5 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) HSDR_N_2 PF13588.6 gi|14520323|ref|NP_125798.1| - 1.6e-09 37.8 0.0 2.8e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) PDDEXK_9 PF08011.11 gi|14520323|ref|NP_125798.1| - 0.0013 18.6 0.3 0.0034 17.3 0.0 2.0 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily ATPgrasp_YheCD PF14398.6 gi|14520323|ref|NP_125798.1| - 0.015 14.5 0.0 0.035 13.3 0.0 1.5 2 0 0 2 2 2 0 YheC/D like ATP-grasp Metallophos PF00149.28 gi|14520324|ref|NP_125799.1| - 4.2e-26 92.7 7.9 5.1e-17 63.1 4.5 2.5 2 1 0 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|14520324|ref|NP_125799.1| - 3.9e-22 79.2 1.8 2.8e-11 43.9 0.8 2.6 2 1 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 gi|14520324|ref|NP_125799.1| - 0.14 11.1 0.1 4.9 6.1 0.0 2.4 2 0 0 2 2 2 0 PhoD-like phosphatase DUF2183 PF09949.9 gi|14520324|ref|NP_125799.1| - 0.15 12.4 0.0 0.5 10.7 0.0 1.9 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) CBS PF00571.28 gi|14520325|ref|NP_125800.1| - 3.3e-30 104.3 4.3 5.2e-16 58.8 0.3 2.1 2 0 0 2 2 2 2 CBS domain tRNA-synt_2c PF01411.19 gi|14520326|ref|NP_125801.1| - 1.6e-13 50.0 0.1 2.2e-13 49.6 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|14520326|ref|NP_125801.1| - 1.4e-09 37.9 0.8 2.9e-09 36.9 0.8 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Ntox33 PF15533.6 gi|14520326|ref|NP_125801.1| - 0.03 14.8 3.8 0.078 13.5 0.0 3.1 3 1 1 4 4 4 0 Bacterial toxin 33 AAA_12 PF13087.6 gi|14520327|ref|NP_125802.1| - 6.1e-21 75.0 0.0 3.2e-20 72.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|14520327|ref|NP_125802.1| - 1.1e-13 51.6 0.1 9.2e-06 25.6 0.0 2.3 1 1 1 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|14520327|ref|NP_125802.1| - 2.9e-12 46.7 0.0 1.1e-11 44.8 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|14520327|ref|NP_125802.1| - 3.5e-09 37.1 0.1 8.7e-09 35.9 0.1 1.7 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 gi|14520327|ref|NP_125802.1| - 5.1e-05 23.2 0.0 0.0001 22.2 0.0 1.4 1 0 0 1 1 1 1 Helicase Viral_helicase1 PF01443.18 gi|14520327|ref|NP_125802.1| - 0.0003 20.6 0.0 0.036 13.8 0.0 2.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase UvrD_C_2 PF13538.6 gi|14520327|ref|NP_125802.1| - 0.0005 19.8 0.0 0.0017 18.2 0.0 1.9 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain Cas_Cas4 PF01930.17 gi|14520327|ref|NP_125802.1| - 0.001 19.2 0.0 0.0032 17.6 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|14520327|ref|NP_125802.1| - 0.0013 18.7 0.0 0.0038 17.2 0.0 1.9 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DEAD PF00270.29 gi|14520327|ref|NP_125802.1| - 0.0021 17.9 0.2 0.0065 16.3 0.2 1.8 1 1 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 gi|14520327|ref|NP_125802.1| - 0.076 12.4 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA PF00004.29 gi|14520327|ref|NP_125802.1| - 0.39 11.1 1.5 2.3 8.6 1.5 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Intein_splicing PF14890.6 gi|14520328|ref|NP_125803.1| - 9.7e-39 132.4 0.0 4.1e-22 78.6 0.0 2.7 2 1 0 2 2 2 2 Intein splicing domain LAGLIDADG_3 PF14528.6 gi|14520328|ref|NP_125803.1| - 1.2e-21 76.8 10.4 1.5e-09 38.0 0.0 6.3 6 1 1 7 7 6 3 LAGLIDADG-like domain Rep_fac_C PF08542.11 gi|14520328|ref|NP_125803.1| - 2.1e-21 76.1 1.8 5.7e-21 74.7 0.1 2.8 3 0 0 3 3 1 1 Replication factor C C-terminal domain HTH_3 PF01381.22 gi|14520328|ref|NP_125803.1| - 3.1e-08 33.5 8.6 2e-07 30.9 0.5 4.7 5 0 0 5 5 5 1 Helix-turn-helix AAA PF00004.29 gi|14520328|ref|NP_125803.1| - 6.4e-07 29.9 4.9 4.9e-05 23.8 0.0 3.6 4 0 0 4 4 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|14520328|ref|NP_125803.1| - 8.2e-07 28.9 0.2 0.013 15.3 0.1 3.5 3 0 0 3 3 3 1 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|14520328|ref|NP_125803.1| - 2.8e-06 27.2 0.4 4.7e-05 23.2 0.0 2.9 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain HTH_26 PF13443.6 gi|14520328|ref|NP_125803.1| - 9.3e-06 26.0 0.4 0.0037 17.7 0.0 3.7 3 0 0 3 3 3 1 Cro/C1-type HTH DNA-binding domain MarR_2 PF12802.7 gi|14520328|ref|NP_125803.1| - 5.7e-05 22.9 0.1 0.00024 20.9 0.1 2.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|14520328|ref|NP_125803.1| - 5.9e-05 22.9 1.3 0.00021 21.1 0.1 2.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14520328|ref|NP_125803.1| - 8.5e-05 22.0 4.5 0.00089 18.8 1.1 3.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|14520328|ref|NP_125803.1| - 0.00016 21.5 0.6 0.00062 19.6 0.6 2.1 1 0 0 1 1 1 1 MarR family AAA_assoc_2 PF16193.5 gi|14520328|ref|NP_125803.1| - 0.0002 21.6 1.9 0.00033 20.9 0.1 2.3 2 0 0 2 2 1 1 AAA C-terminal domain Rad17 PF03215.15 gi|14520328|ref|NP_125803.1| - 0.00042 20.3 0.0 0.0012 18.8 0.0 1.7 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|14520328|ref|NP_125803.1| - 0.00066 20.1 1.5 0.47 10.8 0.0 3.5 3 0 0 3 3 3 1 AAA ATPase domain HTH_31 PF13560.6 gi|14520328|ref|NP_125803.1| - 0.0027 18.0 0.1 0.042 14.2 0.0 2.9 2 1 0 2 2 2 1 Helix-turn-helix domain AAA_22 PF13401.6 gi|14520328|ref|NP_125803.1| - 0.0066 16.7 0.4 7.3 6.9 0.0 3.5 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 gi|14520328|ref|NP_125803.1| - 0.008 15.6 0.0 1.1 8.6 0.0 2.5 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI LexA_DNA_bind PF01726.16 gi|14520328|ref|NP_125803.1| - 0.012 15.3 0.6 0.059 13.1 0.6 2.2 1 1 0 1 1 1 0 LexA DNA binding domain PT-HINT PF07591.11 gi|14520328|ref|NP_125803.1| - 0.013 15.8 0.0 0.17 12.1 0.0 2.9 3 0 0 3 3 2 0 Pretoxin HINT domain DUF1400 PF07176.11 gi|14520328|ref|NP_125803.1| - 0.017 15.4 0.2 12 6.1 0.0 4.5 4 0 0 4 4 4 0 Alpha/beta hydrolase of unknown function (DUF1400) HTH_34 PF13601.6 gi|14520328|ref|NP_125803.1| - 0.02 15.1 0.0 0.11 12.7 0.0 2.3 2 0 0 2 2 1 0 Winged helix DNA-binding domain PadR PF03551.14 gi|14520328|ref|NP_125803.1| - 0.025 14.5 0.5 0.43 10.6 0.1 3.0 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_46 PF15977.5 gi|14520328|ref|NP_125803.1| - 0.038 14.0 0.2 0.2 11.7 0.2 2.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding Hint PF01079.20 gi|14520328|ref|NP_125803.1| - 0.042 13.4 0.0 0.098 12.1 0.0 1.6 1 0 0 1 1 1 0 Hint module HTH_Mga PF08280.11 gi|14520328|ref|NP_125803.1| - 0.053 13.5 1.0 0.2 11.7 0.2 2.3 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_33 PF13592.6 gi|14520328|ref|NP_125803.1| - 0.066 12.9 0.0 0.53 10.0 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|14520328|ref|NP_125803.1| - 0.082 12.9 0.4 0.39 10.7 0.4 2.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PYRIN PF02758.16 gi|14520328|ref|NP_125803.1| - 0.089 12.9 8.6 0.57 10.4 1.1 3.5 3 0 0 3 3 2 0 PAAD/DAPIN/Pyrin domain Rrf2 PF02082.20 gi|14520328|ref|NP_125803.1| - 0.092 13.1 0.1 0.42 11.0 0.1 2.2 1 0 0 1 1 1 0 Transcriptional regulator Penicillinase_R PF03965.16 gi|14520328|ref|NP_125803.1| - 0.14 12.5 2.5 0.42 11.0 0.2 3.0 2 1 1 3 3 3 0 Penicillinase repressor Focal_AT PF03623.13 gi|14520328|ref|NP_125803.1| - 0.16 12.0 0.3 0.56 10.2 0.3 1.9 1 0 0 1 1 1 0 Focal adhesion targeting region FAA_hydrolase_N PF09298.11 gi|14520328|ref|NP_125803.1| - 0.21 11.8 1.3 3.6 7.8 0.0 3.6 4 0 0 4 4 4 0 Fumarylacetoacetase N-terminal Sulfolobus_pRN PF05584.11 gi|14520328|ref|NP_125803.1| - 0.23 11.5 3.0 12 6.0 0.0 2.9 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein Rio2_N PF09202.11 gi|14520328|ref|NP_125803.1| - 0.36 11.1 2.3 1.2 9.4 0.1 3.0 4 0 0 4 4 1 0 Rio2, N-terminal GntR PF00392.21 gi|14520328|ref|NP_125803.1| - 0.87 9.3 3.1 2.3 7.9 0.2 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family AAA PF00004.29 gi|14520329|ref|NP_125804.1| - 2.8e-17 63.4 0.0 9.4e-17 61.7 0.0 2.0 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|14520329|ref|NP_125804.1| - 2.4e-12 47.2 0.0 7e-12 45.6 0.0 1.9 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|14520329|ref|NP_125804.1| - 6.6e-08 32.7 2.0 1.3e-07 31.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|14520329|ref|NP_125804.1| - 3.6e-07 30.3 0.0 1.9e-06 27.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_11 PF13086.6 gi|14520329|ref|NP_125804.1| - 4.9e-07 29.8 6.8 0.011 15.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 gi|14520329|ref|NP_125804.1| - 1.8e-06 27.8 0.0 5.9e-06 26.1 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|14520329|ref|NP_125804.1| - 2e-06 28.1 1.6 9.6e-05 22.7 0.0 3.4 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|14520329|ref|NP_125804.1| - 1.1e-05 25.9 0.0 7.1e-05 23.2 0.0 2.3 1 1 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|14520329|ref|NP_125804.1| - 7.9e-05 22.0 0.0 0.00023 20.5 0.0 1.8 1 0 0 1 1 1 1 Zeta toxin DUF815 PF05673.13 gi|14520329|ref|NP_125804.1| - 0.00014 21.1 0.0 0.00014 21.1 0.0 2.4 4 0 0 4 4 3 1 Protein of unknown function (DUF815) DNA_pol3_delta PF06144.13 gi|14520329|ref|NP_125804.1| - 0.00015 21.6 0.3 0.006 16.4 0.0 3.0 2 1 0 2 2 2 1 DNA polymerase III, delta subunit AAA_24 PF13479.6 gi|14520329|ref|NP_125804.1| - 0.0002 21.2 0.0 0.00049 19.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|14520329|ref|NP_125804.1| - 0.00038 20.8 0.2 0.076 13.3 0.1 2.9 2 1 1 3 3 3 1 AAA domain T2SSE PF00437.20 gi|14520329|ref|NP_125804.1| - 0.0008 18.6 0.0 0.0019 17.3 0.0 1.6 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_28 PF13521.6 gi|14520329|ref|NP_125804.1| - 0.0011 19.2 0.9 0.01 16.1 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_25 PF13481.6 gi|14520329|ref|NP_125804.1| - 0.0013 18.3 0.0 0.0039 16.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|14520329|ref|NP_125804.1| - 0.0014 19.1 0.0 0.0014 19.1 0.0 3.2 3 0 0 3 3 1 1 AAA domain AAA_6 PF12774.7 gi|14520329|ref|NP_125804.1| - 0.0032 16.5 0.2 0.012 14.6 0.0 1.8 2 0 0 2 2 2 1 Hydrolytic ATP binding site of dynein motor region AAA_18 PF13238.6 gi|14520329|ref|NP_125804.1| - 0.0032 18.0 0.0 0.0032 18.0 0.0 3.0 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|14520329|ref|NP_125804.1| - 0.0045 17.2 2.3 0.0065 16.6 0.0 2.3 2 0 0 2 2 1 1 AAA domain ABC_tran PF00005.27 gi|14520329|ref|NP_125804.1| - 0.0067 16.9 1.4 0.12 12.9 0.0 2.8 2 1 1 3 3 3 1 ABC transporter AAA_7 PF12775.7 gi|14520329|ref|NP_125804.1| - 0.0073 15.8 0.0 0.021 14.4 0.0 1.7 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 gi|14520329|ref|NP_125804.1| - 0.01 15.5 0.0 0.028 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|14520329|ref|NP_125804.1| - 0.011 15.5 0.4 0.029 14.1 0.0 1.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase ResIII PF04851.15 gi|14520329|ref|NP_125804.1| - 0.015 15.3 0.0 0.015 15.3 0.0 2.8 2 2 0 2 2 1 0 Type III restriction enzyme, res subunit PPV_E1_C PF00519.17 gi|14520329|ref|NP_125804.1| - 0.02 13.7 0.0 0.035 13.0 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase Hydin_ADK PF17213.3 gi|14520329|ref|NP_125804.1| - 0.024 14.9 4.5 0.098 12.9 0.0 2.5 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Ploopntkinase3 PF18751.1 gi|14520329|ref|NP_125804.1| - 0.041 13.8 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_assoc_2 PF16193.5 gi|14520329|ref|NP_125804.1| - 0.043 14.1 0.1 0.043 14.1 0.1 2.4 3 0 0 3 3 1 0 AAA C-terminal domain SRP54 PF00448.22 gi|14520329|ref|NP_125804.1| - 0.055 13.1 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TsaE PF02367.17 gi|14520329|ref|NP_125804.1| - 0.057 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|14520329|ref|NP_125804.1| - 0.068 13.6 0.0 0.17 12.3 0.0 1.7 1 0 0 1 1 1 0 RNA helicase HrcA_DNA-bdg PF03444.15 gi|14520329|ref|NP_125804.1| - 0.099 12.3 0.1 0.33 10.6 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AAA_29 PF13555.6 gi|14520329|ref|NP_125804.1| - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|14520329|ref|NP_125804.1| - 0.16 12.5 13.7 17 5.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain Presenilin PF01080.17 gi|14520329|ref|NP_125804.1| - 0.3 9.8 4.5 0.41 9.4 4.5 1.2 1 0 0 1 1 1 0 Presenilin PcfK PF14058.6 gi|14520329|ref|NP_125804.1| - 0.3 11.3 16.2 0.99 9.7 16.2 1.9 1 0 0 1 1 1 0 PcfK-like protein GAGA_bind PF06217.12 gi|14520329|ref|NP_125804.1| - 0.67 10.2 7.7 1.1 9.5 7.7 1.3 1 0 0 1 1 1 0 GAGA binding protein-like family DUF913 PF06025.12 gi|14520329|ref|NP_125804.1| - 0.76 8.7 4.1 1.1 8.2 4.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FancD2 PF14631.6 gi|14520329|ref|NP_125804.1| - 2 5.7 9.0 2.6 5.3 9.0 1.1 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Radical_SAM PF04055.21 gi|14520330|ref|NP_125805.1| - 2.3e-36 125.7 0.4 4e-36 124.9 0.4 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|14520330|ref|NP_125805.1| - 4.3e-21 75.2 0.0 6.9e-21 74.5 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|14520330|ref|NP_125805.1| - 4e-09 36.9 0.0 7.4e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14520330|ref|NP_125805.1| - 9.1e-07 29.0 0.0 1.7e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain BSD PF03909.17 gi|14520330|ref|NP_125805.1| - 0.061 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 BSD domain Cytochrome_CBB3 PF13442.6 gi|14520330|ref|NP_125805.1| - 0.091 13.1 0.0 2.5 8.5 0.0 2.5 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III GHMP_kinases_C PF08544.13 gi|14520330|ref|NP_125805.1| - 0.2 12.1 0.0 0.84 10.1 0.0 2.1 2 0 0 2 2 2 0 GHMP kinases C terminal Met_10 PF02475.16 gi|14520331|ref|NP_125806.1| - 3.1e-38 131.5 0.1 4.6e-38 131.0 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|14520331|ref|NP_125806.1| - 7.4e-05 22.6 0.7 7.4e-05 22.6 0.7 2.5 2 0 0 2 2 2 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_31 PF13847.6 gi|14520331|ref|NP_125806.1| - 0.0006 19.6 0.0 0.0012 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|14520331|ref|NP_125806.1| - 0.0035 16.9 0.0 0.006 16.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 gi|14520331|ref|NP_125806.1| - 0.013 15.1 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|14520331|ref|NP_125806.1| - 0.018 14.5 0.0 0.036 13.4 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|14520331|ref|NP_125806.1| - 0.02 15.6 0.0 0.056 14.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain VAPB_antitox PF02697.14 gi|14520332|ref|NP_125807.1| - 0.046 14.5 4.6 0.12 13.1 0.5 3.0 2 1 1 3 3 3 0 Putative antitoxin DUF4559 PF15112.6 gi|14520332|ref|NP_125807.1| - 0.048 13.3 0.3 0.062 13.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Vinculin PF01044.19 gi|14520332|ref|NP_125807.1| - 0.048 11.9 0.0 0.056 11.7 0.0 1.1 1 0 0 1 1 1 0 Vinculin family RsbRD_N PF14361.6 gi|14520332|ref|NP_125807.1| - 0.082 13.6 0.3 0.22 12.2 0.1 1.8 2 0 0 2 2 2 0 RsbT co-antagonist protein rsbRD N-terminal domain eIF3_N PF09440.10 gi|14520332|ref|NP_125807.1| - 0.1 13.0 0.3 0.3 11.5 0.1 1.9 2 0 0 2 2 2 0 eIF3 subunit 6 N terminal domain LXG PF04740.12 gi|14520332|ref|NP_125807.1| - 0.11 12.2 0.4 0.18 11.5 0.4 1.4 1 0 0 1 1 1 0 LXG domain of WXG superfamily DUF402 PF04167.13 gi|14520333|ref|NP_125808.1| - 2.9e-12 46.6 8.8 3.6e-12 46.3 2.2 3.1 3 0 0 3 3 3 1 Protein of unknown function (DUF402) RNase_E_G PF10150.9 gi|14520333|ref|NP_125808.1| - 3.6e-11 43.0 0.0 5.8e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease E/G family S1 PF00575.23 gi|14520333|ref|NP_125808.1| - 0.017 15.5 1.9 0.089 13.1 1.9 2.3 1 0 0 1 1 1 0 S1 RNA binding domain DUF4478 PF14793.6 gi|14520333|ref|NP_125808.1| - 0.14 12.0 0.0 0.3 11.0 0.0 1.6 1 0 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MORN_2 PF07661.13 gi|14520333|ref|NP_125808.1| - 0.99 9.8 3.1 10 6.7 0.2 3.5 3 0 0 3 3 3 0 MORN repeat variant PIN PF01850.21 gi|14520334|ref|NP_125809.1| - 6.5e-17 62.2 0.1 7.9e-17 61.9 0.1 1.0 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 gi|14520334|ref|NP_125809.1| - 2.2e-05 24.7 0.0 0.00022 21.5 0.0 1.9 1 1 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|14520334|ref|NP_125809.1| - 0.00062 20.1 0.0 0.0011 19.2 0.0 1.4 1 1 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|14520334|ref|NP_125809.1| - 0.052 14.3 0.1 0.09 13.5 0.1 1.8 1 1 0 1 1 1 0 PIN domain PIN_12 PF16289.5 gi|14520334|ref|NP_125809.1| - 0.091 13.2 0.1 0.18 12.3 0.1 1.7 1 1 0 1 1 1 0 PIN domain MazE_antitoxin PF04014.18 gi|14520335|ref|NP_125810.1| - 5.7e-14 51.7 0.6 8.2e-14 51.2 0.6 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|14520335|ref|NP_125810.1| - 5.6e-05 23.5 0.1 7.6e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin Rad51 PF08423.11 gi|14520336|ref|NP_125811.1| - 5.6e-35 120.8 0.1 8.9e-35 120.2 0.1 1.3 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|14520336|ref|NP_125811.1| - 3.5e-13 49.5 0.1 5.1e-13 48.9 0.1 1.3 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|14520336|ref|NP_125811.1| - 9.6e-11 41.6 0.1 1.7e-10 40.8 0.1 1.5 1 1 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|14520336|ref|NP_125811.1| - 1.1e-09 38.2 0.6 9e-09 35.2 0.6 2.0 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|14520336|ref|NP_125811.1| - 1e-06 28.6 0.0 1.5e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|14520336|ref|NP_125811.1| - 0.001 18.5 3.0 0.11 11.9 0.6 2.1 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain AAA_18 PF13238.6 gi|14520336|ref|NP_125811.1| - 0.0033 17.9 0.0 0.006 17.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain CobU PF02283.16 gi|14520336|ref|NP_125811.1| - 0.012 15.2 0.0 0.021 14.4 0.0 1.3 1 1 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase PAXNEB PF05625.11 gi|14520336|ref|NP_125811.1| - 0.047 12.8 0.6 0.094 11.8 0.1 1.7 2 0 0 2 2 2 0 PAXNEB protein AAA_22 PF13401.6 gi|14520336|ref|NP_125811.1| - 0.12 12.6 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Lactamase_B_3 PF13483.6 gi|14520337|ref|NP_125812.1| - 2.6e-30 105.5 0.2 3.1e-30 105.2 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|14520337|ref|NP_125812.1| - 4.2e-19 68.9 0.1 6.4e-19 68.3 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14520337|ref|NP_125812.1| - 7.7e-13 48.9 0.7 1.2e-12 48.2 0.7 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SAF PF08666.12 gi|14520337|ref|NP_125812.1| - 0.033 14.8 0.0 0.39 11.4 0.0 2.2 2 0 0 2 2 2 0 SAF domain PolC_DP2 PF03833.13 gi|14520338|ref|NP_125813.1| - 0 1224.0 0.0 0 1223.1 0.0 1.5 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 Intein_splicing PF14890.6 gi|14520338|ref|NP_125813.1| - 1.1e-13 51.3 5.4 2.7e-13 50.0 3.7 2.5 2 0 0 2 2 2 1 Intein splicing domain zinc-ribbons_6 PF07191.12 gi|14520338|ref|NP_125813.1| - 0.00013 21.9 9.4 0.073 13.1 7.5 2.4 2 0 0 2 2 2 2 zinc-ribbons HypA PF01155.19 gi|14520338|ref|NP_125813.1| - 0.004 17.2 13.2 1 9.4 0.0 3.7 2 1 1 3 3 3 3 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|14520338|ref|NP_125813.1| - 0.018 15.0 18.1 3.6 7.7 0.4 3.3 2 1 0 2 2 2 0 Double zinc ribbon TackOD1 PF18551.1 gi|14520338|ref|NP_125813.1| - 0.022 14.4 9.1 0.029 14.1 3.4 2.3 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 Iron_traffic PF04362.14 gi|14520338|ref|NP_125813.1| - 0.093 12.4 0.0 0.24 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial Fe(2+) trafficking HNH_5 PF14279.6 gi|14520338|ref|NP_125813.1| - 0.17 11.8 5.3 1.4 8.9 0.0 3.3 2 1 1 3 3 3 0 HNH endonuclease DUF3268 PF11672.8 gi|14520338|ref|NP_125813.1| - 1.9 8.8 5.2 2.4 8.5 1.7 2.9 2 1 1 3 3 3 0 zinc-finger-containing domain zf-CHY PF05495.12 gi|14520338|ref|NP_125813.1| - 2.3 8.7 9.2 15 6.2 5.7 2.7 2 0 0 2 2 2 0 CHY zinc finger Metallophos PF00149.28 gi|14520339|ref|NP_125814.1| - 9.5e-12 45.8 0.6 2e-11 44.8 0.2 1.7 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase DNA_pol_E_B PF04042.16 gi|14520339|ref|NP_125814.1| - 1.3e-11 44.2 0.0 2.1e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B tRNA_anti-codon PF01336.25 gi|14520339|ref|NP_125814.1| - 2.1e-05 24.4 1.5 0.00016 21.6 0.1 2.4 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain Metallophos_2 PF12850.7 gi|14520339|ref|NP_125814.1| - 0.0066 16.7 0.0 0.015 15.5 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Cdc6_C PF09079.11 gi|14520340|ref|NP_125815.1| - 3.8e-27 94.1 0.5 1.1e-26 92.6 0.1 2.1 3 0 0 3 3 1 1 CDC6, C terminal winged helix domain AAA PF00004.29 gi|14520340|ref|NP_125815.1| - 1.3e-10 41.8 0.1 4.5e-10 40.1 0.1 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|14520340|ref|NP_125815.1| - 4.4e-10 40.0 0.0 2e-09 37.9 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|14520340|ref|NP_125815.1| - 8.4e-10 39.3 0.0 1.5e-08 35.2 0.0 2.5 1 1 0 1 1 1 1 AAA ATPase domain TniB PF05621.11 gi|14520340|ref|NP_125815.1| - 2e-06 27.3 0.1 4.2e-06 26.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|14520340|ref|NP_125815.1| - 6.8e-06 26.2 1.6 6.8e-06 26.2 1.6 1.7 2 0 0 2 2 1 1 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|14520340|ref|NP_125815.1| - 0.00012 21.4 1.1 0.00015 21.1 0.2 1.7 2 0 0 2 2 2 1 NB-ARC domain DUF815 PF05673.13 gi|14520340|ref|NP_125815.1| - 0.00012 21.3 0.0 0.00048 19.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF815) KAP_NTPase PF07693.14 gi|14520340|ref|NP_125815.1| - 0.00016 21.0 0.5 0.0022 17.3 0.5 2.4 1 1 0 1 1 1 1 KAP family P-loop domain AAA_32 PF13654.6 gi|14520340|ref|NP_125815.1| - 0.00033 19.6 0.8 0.033 13.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 gi|14520340|ref|NP_125815.1| - 0.00052 19.4 0.0 0.00075 18.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Microtub_bd PF16796.5 gi|14520340|ref|NP_125815.1| - 0.001 19.0 0.3 0.0057 16.6 0.3 2.3 1 1 0 1 1 1 1 Microtubule binding Kinesin PF00225.23 gi|14520340|ref|NP_125815.1| - 0.0011 18.0 0.0 0.0018 17.3 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain PIF1 PF05970.14 gi|14520340|ref|NP_125815.1| - 0.0012 18.0 0.0 0.0023 17.2 0.0 1.4 1 0 0 1 1 1 1 PIF1-like helicase DEAD PF00270.29 gi|14520340|ref|NP_125815.1| - 0.003 17.3 1.8 0.73 9.6 1.8 2.4 1 1 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|14520340|ref|NP_125815.1| - 0.0033 17.5 0.1 0.0084 16.1 0.1 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_24 PF13479.6 gi|14520340|ref|NP_125815.1| - 0.0039 16.9 0.3 0.0084 15.9 0.3 1.6 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|14520340|ref|NP_125815.1| - 0.0096 15.9 0.0 0.025 14.5 0.0 1.8 1 1 0 1 1 1 1 NACHT domain AAA_2 PF07724.14 gi|14520340|ref|NP_125815.1| - 0.0098 16.0 0.3 0.066 13.3 0.0 2.4 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_assoc_2 PF16193.5 gi|14520340|ref|NP_125815.1| - 0.01 16.1 0.1 0.032 14.6 0.1 1.9 1 0 0 1 1 1 0 AAA C-terminal domain Sigma54_activat PF00158.26 gi|14520340|ref|NP_125815.1| - 0.011 15.5 0.1 0.047 13.4 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|14520340|ref|NP_125815.1| - 0.017 14.6 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 gi|14520340|ref|NP_125815.1| - 0.024 13.7 0.0 0.049 12.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_lid_10 PF17872.1 gi|14520340|ref|NP_125815.1| - 0.025 14.7 0.4 2 8.6 0.1 2.5 2 0 0 2 2 2 0 AAA lid domain TsaE PF02367.17 gi|14520340|ref|NP_125815.1| - 0.056 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF87 PF01935.17 gi|14520340|ref|NP_125815.1| - 0.065 13.3 1.1 0.2 11.7 0.4 2.1 1 1 1 2 2 2 0 Helicase HerA, central domain Zeta_toxin PF06414.12 gi|14520340|ref|NP_125815.1| - 0.099 11.9 0.3 0.68 9.2 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin FtsK_SpoIIIE PF01580.18 gi|14520340|ref|NP_125815.1| - 0.11 11.8 0.1 0.67 9.3 0.0 2.0 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF853 PF05872.12 gi|14520340|ref|NP_125815.1| - 0.12 11.0 0.0 0.24 9.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) RNA_helicase PF00910.22 gi|14520340|ref|NP_125815.1| - 0.14 12.6 0.0 0.3 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 gi|14520340|ref|NP_125815.1| - 0.15 12.6 0.1 0.61 10.6 0.0 2.2 3 0 0 3 3 2 0 ABC transporter AAA_19 PF13245.6 gi|14520340|ref|NP_125815.1| - 0.26 11.6 1.1 0.51 10.7 0.1 2.0 3 0 0 3 3 2 0 AAA domain PNP_UDP_1 PF01048.20 gi|14520341|ref|NP_125816.1| - 8.2e-52 175.8 0.0 9.2e-52 175.6 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily PAC2 PF09754.9 gi|14520342|ref|NP_125817.1| - 3.1e-45 154.8 0.0 3.5e-45 154.6 0.0 1.0 1 0 0 1 1 1 1 PAC2 family YqbF PF14553.6 gi|14520342|ref|NP_125817.1| - 0.033 14.0 0.9 0.63 10.0 0.6 2.3 2 0 0 2 2 2 0 YqbF, hypothetical protein domain DUF473 PF04322.12 gi|14520343|ref|NP_125818.1| - 1.6e-37 127.9 0.1 2e-37 127.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF473) ACT_3 PF10000.9 gi|14520343|ref|NP_125818.1| - 0.0058 16.5 0.0 0.22 11.5 0.1 2.2 2 0 0 2 2 2 1 ACT domain NucS PF01939.16 gi|14520344|ref|NP_125819.1| - 1.7e-84 282.7 0.1 2e-84 282.5 0.1 1.0 1 0 0 1 1 1 1 Endonuclease NucS Cas_Cas4 PF01930.17 gi|14520344|ref|NP_125819.1| - 0.0048 17.0 0.0 0.015 15.4 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function DUF83 DUF4263 PF14082.6 gi|14520344|ref|NP_125819.1| - 0.026 14.8 0.0 0.19 12.0 0.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4263) HSDR_N PF04313.14 gi|14520344|ref|NP_125819.1| - 0.061 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) DUF63 PF01889.17 gi|14520345|ref|NP_125820.1| - 4.8e-73 246.7 19.9 5.3e-73 246.5 19.9 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 FeoB_associated PF12669.7 gi|14520345|ref|NP_125820.1| - 5.5 7.5 5.2 41 4.7 0.0 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein CbiQ PF02361.16 gi|14520347|ref|NP_125822.1| - 8.8e-30 104.0 8.2 1.3e-29 103.4 8.2 1.2 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.27 gi|14520348|ref|NP_125823.1| - 2.8e-30 105.6 0.0 3.9e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|14520348|ref|NP_125823.1| - 8.9e-12 44.9 0.1 7.2e-11 41.9 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|14520348|ref|NP_125823.1| - 1.4e-11 44.7 1.6 2.9e-05 24.0 0.0 2.4 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|14520348|ref|NP_125823.1| - 1.1e-05 25.3 0.1 0.00088 19.1 0.1 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|14520348|ref|NP_125823.1| - 1.6e-05 25.5 0.0 2.2e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|14520348|ref|NP_125823.1| - 2.4e-05 24.0 0.1 4.3e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|14520348|ref|NP_125823.1| - 0.00049 20.5 0.0 0.0015 18.9 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|14520348|ref|NP_125823.1| - 0.001 19.0 0.2 0.0059 16.5 0.0 2.0 2 0 0 2 2 2 1 NTPase AAA PF00004.29 gi|14520348|ref|NP_125823.1| - 0.0015 19.0 0.0 0.016 15.6 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|14520348|ref|NP_125823.1| - 0.0019 18.5 0.1 0.012 15.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 gi|14520348|ref|NP_125823.1| - 0.0019 17.1 0.3 0.19 10.5 0.0 2.3 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_13 PF13166.6 gi|14520348|ref|NP_125823.1| - 0.0032 16.2 0.0 0.25 9.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 gi|14520348|ref|NP_125823.1| - 0.0051 16.2 0.1 0.99 8.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein DLIC PF05783.11 gi|14520348|ref|NP_125823.1| - 0.0051 15.7 0.0 0.0073 15.2 0.0 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) ATP-synt_ab PF00006.25 gi|14520348|ref|NP_125823.1| - 0.0074 16.0 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|14520348|ref|NP_125823.1| - 0.01 15.7 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 gi|14520348|ref|NP_125823.1| - 0.012 15.8 0.0 0.44 10.8 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Mg_chelatase PF01078.21 gi|14520348|ref|NP_125823.1| - 0.016 14.6 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 gi|14520348|ref|NP_125823.1| - 0.017 14.9 0.0 0.022 14.5 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|14520348|ref|NP_125823.1| - 0.029 14.4 0.0 0.17 12.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|14520348|ref|NP_125823.1| - 0.037 13.7 1.2 0.041 13.6 0.2 1.6 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|14520348|ref|NP_125823.1| - 0.045 13.7 1.2 0.094 12.6 0.2 2.0 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 gi|14520348|ref|NP_125823.1| - 0.05 13.8 0.1 0.098 12.8 0.1 1.8 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|14520348|ref|NP_125823.1| - 0.055 13.2 0.0 0.098 12.4 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|14520348|ref|NP_125823.1| - 0.063 12.9 0.2 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain cobW PF02492.19 gi|14520348|ref|NP_125823.1| - 0.065 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Rad17 PF03215.15 gi|14520348|ref|NP_125823.1| - 0.094 12.6 0.0 0.21 11.5 0.0 1.6 2 0 0 2 2 1 0 Rad17 P-loop domain AAA_19 PF13245.6 gi|14520348|ref|NP_125823.1| - 0.12 12.7 0.0 0.24 11.7 0.0 1.5 2 0 0 2 2 1 0 AAA domain SART-1 PF03343.13 gi|14520348|ref|NP_125823.1| - 0.36 9.3 0.3 0.48 8.9 0.3 1.1 1 0 0 1 1 1 0 SART-1 family MscS_porin PF12795.7 gi|14520349|ref|NP_125824.1| - 2.6e-06 27.2 45.7 0.0058 16.2 2.3 3.7 1 1 2 3 3 3 3 Mechanosensitive ion channel porin domain Laminin_I PF06008.14 gi|14520349|ref|NP_125824.1| - 1.4e-05 25.0 14.1 1.4e-05 25.0 14.1 2.5 1 1 2 3 3 3 2 Laminin Domain I WXG100 PF06013.12 gi|14520349|ref|NP_125824.1| - 5.6e-05 23.3 11.7 0.13 12.5 3.9 4.7 3 1 1 4 4 4 2 Proteins of 100 residues with WXG DUF1664 PF07889.12 gi|14520349|ref|NP_125824.1| - 0.00026 21.0 33.3 0.31 11.1 12.2 3.9 2 1 1 3 3 3 3 Protein of unknown function (DUF1664) AAA_13 PF13166.6 gi|14520349|ref|NP_125824.1| - 0.00033 19.5 28.7 0.00033 19.5 28.7 2.1 1 1 1 2 2 2 2 AAA domain Laminin_II PF06009.12 gi|14520349|ref|NP_125824.1| - 0.0072 16.4 32.4 0.24 11.4 1.5 3.9 1 1 3 4 4 4 4 Laminin Domain II Seryl_tRNA_N PF02403.22 gi|14520349|ref|NP_125824.1| - 0.012 15.8 15.1 0.012 15.8 15.1 4.3 1 1 1 4 4 3 0 Seryl-tRNA synthetase N-terminal domain DisA-linker PF10635.9 gi|14520349|ref|NP_125824.1| - 0.014 15.1 8.6 0.014 15.1 8.6 3.9 4 0 0 4 4 4 0 DisA bacterial checkpoint controller linker region Uds1 PF15456.6 gi|14520349|ref|NP_125824.1| - 0.017 15.3 11.0 0.017 15.3 11.0 2.9 2 1 1 3 3 3 0 Up-regulated During Septation DUF3584 PF12128.8 gi|14520349|ref|NP_125824.1| - 0.025 12.1 43.8 0.38 8.2 23.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Atg14 PF10186.9 gi|14520349|ref|NP_125824.1| - 0.037 13.1 50.5 0.15 11.1 12.1 3.1 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 gi|14520349|ref|NP_125824.1| - 0.055 11.6 47.7 1.5 6.9 47.7 2.1 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA T3SSipB PF16535.5 gi|14520349|ref|NP_125824.1| - 0.11 13.0 19.5 0.19 12.2 7.8 2.9 1 1 2 3 3 3 0 Type III cell invasion protein SipB Sec34 PF04136.15 gi|14520349|ref|NP_125824.1| - 0.11 12.4 25.3 0.61 10.0 7.9 3.9 2 2 1 3 3 3 0 Sec34-like family DUF948 PF06103.11 gi|14520349|ref|NP_125824.1| - 0.13 12.5 15.0 0.047 14.0 2.4 4.0 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4201 PF13870.6 gi|14520349|ref|NP_125824.1| - 0.14 11.9 53.2 0.36 10.6 21.6 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) CENP-F_leu_zip PF10473.9 gi|14520349|ref|NP_125824.1| - 0.15 12.1 55.9 0.26 11.3 11.8 3.4 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Alanine_zipper PF11839.8 gi|14520349|ref|NP_125824.1| - 0.2 12.1 6.0 0.24 11.8 2.1 2.7 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein DUF4140 PF13600.6 gi|14520349|ref|NP_125824.1| - 0.21 12.0 40.1 0.6 10.6 1.1 5.3 3 1 1 4 4 4 0 N-terminal domain of unknown function (DUF4140) Occludin_ELL PF07303.13 gi|14520349|ref|NP_125824.1| - 0.25 12.1 42.1 0.79 10.5 15.4 3.8 1 1 2 4 4 3 0 Occludin homology domain NPV_P10 PF05531.12 gi|14520349|ref|NP_125824.1| - 0.35 11.4 21.6 3.2 8.3 3.1 4.8 1 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein HTH_6 PF01418.17 gi|14520349|ref|NP_125824.1| - 0.38 10.7 0.1 0.38 10.7 0.1 3.3 4 0 0 4 4 2 0 Helix-turn-helix domain, rpiR family CENP-H PF05837.12 gi|14520349|ref|NP_125824.1| - 0.4 11.1 48.4 0.4 11.1 5.5 4.1 2 2 2 4 4 4 0 Centromere protein H (CENP-H) PLU-1 PF08429.11 gi|14520349|ref|NP_125824.1| - 0.53 9.4 35.4 6.6 5.8 30.4 3.2 1 1 1 2 2 2 0 PLU-1-like protein TMPIT PF07851.13 gi|14520349|ref|NP_125824.1| - 0.53 9.5 40.2 0.38 9.9 11.5 3.1 1 1 2 3 3 3 0 TMPIT-like protein TPR_MLP1_2 PF07926.12 gi|14520349|ref|NP_125824.1| - 0.56 10.3 48.3 2.7 8.1 5.7 4.1 1 1 3 5 5 5 0 TPR/MLP1/MLP2-like protein MCPsignal PF00015.21 gi|14520349|ref|NP_125824.1| - 0.62 9.8 16.0 0.25 11.1 5.9 2.9 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Snapin_Pallidin PF14712.6 gi|14520349|ref|NP_125824.1| - 0.67 10.4 42.4 0.52 10.8 6.9 4.3 1 1 3 4 4 4 0 Snapin/Pallidin GAS PF13851.6 gi|14520349|ref|NP_125824.1| - 0.75 9.1 61.1 0.52 9.6 12.1 4.2 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding DUF5082 PF16888.5 gi|14520349|ref|NP_125824.1| - 0.83 9.9 42.7 0.56 10.5 15.5 4.8 2 1 3 5 5 5 0 Domain of unknown function (DUF5082) APG6_N PF17675.1 gi|14520349|ref|NP_125824.1| - 0.89 10.1 58.4 1.3 9.5 20.0 4.0 1 1 1 3 3 3 0 Apg6 coiled-coil region Fib_alpha PF08702.10 gi|14520349|ref|NP_125824.1| - 1.2 9.3 42.7 1.6 8.9 17.3 3.3 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family ERM PF00769.19 gi|14520349|ref|NP_125824.1| - 1.5 8.6 58.2 1.3 8.8 8.9 3.3 1 1 2 3 3 3 0 Ezrin/radixin/moesin family PspA_IM30 PF04012.12 gi|14520349|ref|NP_125824.1| - 1.7 8.2 47.8 1.9 8.0 21.8 4.0 1 1 0 2 2 1 0 PspA/IM30 family FUSC PF04632.12 gi|14520349|ref|NP_125824.1| - 1.7 7.0 14.1 0.35 9.3 3.5 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family DUF2935 PF11155.8 gi|14520349|ref|NP_125824.1| - 1.9 8.8 23.7 1.1 9.6 2.9 4.1 2 2 1 3 3 3 0 Domain of unknown function (DUF2935) Fez1 PF06818.15 gi|14520349|ref|NP_125824.1| - 2.4 8.6 47.6 4.2 7.8 7.2 3.0 1 1 2 3 3 3 0 Fez1 Spc7 PF08317.11 gi|14520349|ref|NP_125824.1| - 2.4 7.0 54.9 1.7 7.4 22.0 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Syntaxin-6_N PF09177.11 gi|14520349|ref|NP_125824.1| - 2.5 8.7 37.5 2.3 8.9 9.4 4.5 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF724 PF05266.14 gi|14520349|ref|NP_125824.1| - 3.1 7.6 47.7 8.8 6.1 20.0 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) YabA PF06156.13 gi|14520349|ref|NP_125824.1| - 3.2 8.4 43.4 2.1 9.1 9.0 4.2 1 1 3 4 4 4 0 Initiation control protein YabA Prefoldin_2 PF01920.20 gi|14520349|ref|NP_125824.1| - 3.5 7.6 58.9 0.23 11.4 4.3 6.5 2 1 3 5 5 4 0 Prefoldin subunit DUF3450 PF11932.8 gi|14520349|ref|NP_125824.1| - 4.3 6.6 40.3 1 8.6 14.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF2203 PF09969.9 gi|14520349|ref|NP_125824.1| - 6.6 7.5 35.4 2.2 9.0 10.8 3.9 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) GldM_N PF12081.8 gi|14520349|ref|NP_125824.1| - 8 6.5 28.1 3.4 7.7 11.3 3.1 1 1 2 3 3 3 0 GldM N-terminal domain DUF5591 PF17884.1 gi|14520350|ref|NP_125825.1| - 1.1e-49 168.2 0.0 2.3e-49 167.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) PUA PF01472.20 gi|14520350|ref|NP_125825.1| - 1.5e-12 47.2 2.2 3.3e-12 46.2 2.2 1.5 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|14520350|ref|NP_125825.1| - 0.0018 18.3 0.0 0.0036 17.4 0.0 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase DUF2226 PF09987.9 gi|14520350|ref|NP_125825.1| - 0.062 12.6 0.6 0.88 8.9 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2226) AAA_14 PF13173.6 gi|14520351|ref|NP_125826.1| - 5.3e-18 65.3 0.0 1e-17 64.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|14520351|ref|NP_125826.1| - 5.7e-06 26.4 0.2 2.4e-05 24.4 0.0 2.0 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea HTH_24 PF13412.6 gi|14520351|ref|NP_125826.1| - 0.00012 21.5 0.0 0.0003 20.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF4143 PF13635.6 gi|14520351|ref|NP_125826.1| - 0.00024 21.2 0.1 0.00043 20.4 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) HTH_IclR PF09339.10 gi|14520351|ref|NP_125826.1| - 0.001 18.8 0.0 0.0022 17.8 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain AAA_22 PF13401.6 gi|14520351|ref|NP_125826.1| - 0.0026 18.0 0.0 0.0058 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain HTH_36 PF13730.6 gi|14520351|ref|NP_125826.1| - 0.0027 17.6 0.0 0.0052 16.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|14520351|ref|NP_125826.1| - 0.0049 16.8 0.1 0.013 15.4 0.1 1.7 1 0 0 1 1 1 1 HTH domain AAA PF00004.29 gi|14520351|ref|NP_125826.1| - 0.0077 16.7 0.0 0.016 15.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) HTH_28 PF13518.6 gi|14520351|ref|NP_125826.1| - 0.022 14.9 0.2 0.082 13.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain NUMOD1 PF07453.13 gi|14520351|ref|NP_125826.1| - 0.039 14.2 0.0 0.076 13.3 0.0 1.5 1 0 0 1 1 1 0 NUMOD1 domain HTH_20 PF12840.7 gi|14520351|ref|NP_125826.1| - 0.067 13.3 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HU-CCDC81_euk_2 PF18289.1 gi|14520351|ref|NP_125826.1| - 0.071 13.3 0.0 0.18 12.0 0.0 1.7 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HTH_AsnC-type PF13404.6 gi|14520351|ref|NP_125826.1| - 0.11 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Na_H_Exchanger PF00999.21 gi|14520352|ref|NP_125827.1| - 1.3e-70 238.2 41.2 1.7e-70 237.8 41.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Asp-Al_Ex PF06826.12 gi|14520352|ref|NP_125827.1| - 0.071 12.9 33.9 0.26 11.1 9.2 3.2 1 1 2 3 3 3 0 Predicted Permease Membrane Region Aminotran_3 PF00202.21 gi|14520354|ref|NP_125829.1| - 2.4e-116 388.7 0.0 2.9e-116 388.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III DUF349 PF03993.12 gi|14520354|ref|NP_125829.1| - 0.014 15.7 0.0 0.036 14.3 0.0 1.7 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) HTH_24 PF13412.6 gi|14520355|ref|NP_125830.1| - 1.6e-18 66.0 1.2 2.9e-18 65.2 1.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|14520355|ref|NP_125830.1| - 2.6e-18 65.5 1.7 4.8e-18 64.7 1.7 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|14520355|ref|NP_125830.1| - 5.1e-17 61.6 1.0 7.2e-17 61.1 0.3 1.6 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain Sigma70_r4_2 PF08281.12 gi|14520355|ref|NP_125830.1| - 4.5e-08 32.6 0.8 2e-07 30.6 0.3 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_IclR PF09339.10 gi|14520355|ref|NP_125830.1| - 4e-07 29.7 0.0 1.5e-06 27.9 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14520355|ref|NP_125830.1| - 6.3e-06 25.6 1.4 6.3e-06 25.6 1.4 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|14520355|ref|NP_125830.1| - 1.1e-05 25.1 0.2 2.3e-05 24.1 0.2 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_20 PF12840.7 gi|14520355|ref|NP_125830.1| - 1.2e-05 25.3 0.1 2.5e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|14520355|ref|NP_125830.1| - 1.6e-05 24.7 0.3 8.2e-05 22.4 0.1 2.0 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|14520355|ref|NP_125830.1| - 3.3e-05 24.0 0.1 0.00021 21.4 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|14520355|ref|NP_125830.1| - 4.5e-05 23.3 0.0 0.00025 20.9 0.1 2.0 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|14520355|ref|NP_125830.1| - 5.4e-05 23.1 0.2 0.00046 20.1 0.0 2.3 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 gi|14520355|ref|NP_125830.1| - 9.8e-05 22.2 0.7 0.00025 20.9 0.2 1.9 2 1 0 2 2 2 1 MarR family HTH_28 PF13518.6 gi|14520355|ref|NP_125830.1| - 0.00017 21.6 0.1 0.0003 20.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14520355|ref|NP_125830.1| - 0.00018 21.3 0.0 0.00057 19.7 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|14520355|ref|NP_125830.1| - 0.00032 21.1 0.1 0.00075 19.9 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Tnp_ISL3 PF13542.6 gi|14520355|ref|NP_125830.1| - 0.00038 19.8 0.1 0.00075 18.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_DeoR PF08220.12 gi|14520355|ref|NP_125830.1| - 0.00051 19.7 0.5 0.0071 16.1 0.1 2.5 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain CENP-B_N PF04218.13 gi|14520355|ref|NP_125830.1| - 0.00075 19.1 0.1 0.0019 17.8 0.1 1.7 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain FeoC PF09012.10 gi|14520355|ref|NP_125830.1| - 0.0023 18.0 0.0 0.0052 16.8 0.0 1.5 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_38 PF13936.6 gi|14520355|ref|NP_125830.1| - 0.0033 17.1 0.3 0.0062 16.3 0.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|14520355|ref|NP_125830.1| - 0.0042 17.4 0.0 0.017 15.5 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulator DUF742 PF05331.11 gi|14520355|ref|NP_125830.1| - 0.0071 16.1 0.0 0.017 15.0 0.0 1.6 2 0 0 2 2 1 1 Protein of unknown function (DUF742) HTH_47 PF16221.5 gi|14520355|ref|NP_125830.1| - 0.013 15.1 0.1 0.043 13.4 0.0 1.9 2 0 0 2 2 2 0 winged helix-turn-helix Penicillinase_R PF03965.16 gi|14520355|ref|NP_125830.1| - 0.017 15.5 0.1 0.27 11.6 0.0 2.3 2 1 0 2 2 2 0 Penicillinase repressor HTH_Crp_2 PF13545.6 gi|14520355|ref|NP_125830.1| - 0.018 15.0 0.5 0.19 11.7 0.2 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain RuvB_C PF05491.13 gi|14520355|ref|NP_125830.1| - 0.019 14.8 0.0 0.047 13.6 0.0 1.6 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain HTH_9 PF08221.11 gi|14520355|ref|NP_125830.1| - 0.029 14.5 0.0 0.067 13.3 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain RPA_C PF08784.11 gi|14520355|ref|NP_125830.1| - 0.032 14.9 0.1 0.14 12.8 0.0 2.0 2 0 0 2 2 2 0 Replication protein A C terminal HxlR PF01638.17 gi|14520355|ref|NP_125830.1| - 0.033 14.1 0.2 0.073 12.9 0.0 1.7 2 0 0 2 2 1 0 HxlR-like helix-turn-helix Sun2_CC2 PF18580.1 gi|14520355|ref|NP_125830.1| - 0.044 14.0 0.1 0.85 9.9 0.0 2.5 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 AsnC_trans_reg2 PF17805.1 gi|14520355|ref|NP_125830.1| - 0.05 13.8 0.0 0.15 12.2 0.0 1.8 1 1 0 1 1 1 0 AsnC-like ligand binding domain HTH_Mga PF08280.11 gi|14520355|ref|NP_125830.1| - 0.082 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain PCI PF01399.27 gi|14520355|ref|NP_125830.1| - 0.086 13.4 0.3 0.22 12.1 0.1 1.7 2 0 0 2 2 2 0 PCI domain Phage_rep_O PF04492.13 gi|14520355|ref|NP_125830.1| - 0.13 12.9 0.1 2.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Bacteriophage replication protein O Beta-lactamase PF00144.24 gi|14520356|ref|NP_125831.1| - 3.6e-74 249.9 0.0 4.3e-74 249.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase Pab87_oct PF13969.6 gi|14520356|ref|NP_125831.1| - 2.1e-21 75.8 0.2 3.9e-21 74.9 0.2 1.5 1 0 0 1 1 1 1 Pab87 octamerisation domain DUF819 PF05684.12 gi|14520357|ref|NP_125832.1| - 2.2e-13 50.0 0.0 2.6e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF819) DUF819 PF05684.12 gi|14520358|ref|NP_125833.1| - 6.9e-23 81.3 11.2 7.4e-23 81.2 11.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF819) Amidohydro_3 PF07969.11 gi|14520359|ref|NP_125834.1| - 1e-35 124.2 0.0 1.5e-34 120.3 0.0 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|14520359|ref|NP_125834.1| - 4.3e-15 55.9 0.0 2.3e-06 27.2 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.20 gi|14520359|ref|NP_125834.1| - 0.0001 22.6 1.7 0.00021 21.6 1.7 1.5 1 0 0 1 1 1 1 Urease alpha-subunit, N-terminal domain SBP_bac_5 PF00496.22 gi|14520360|ref|NP_125835.1| - 7.9e-97 324.6 0.1 1.1e-96 324.1 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SpoU_sub_bind PF08032.12 gi|14520360|ref|NP_125835.1| - 0.14 12.4 0.0 0.4 11.0 0.0 1.7 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding Myco_arth_vir_N PF09610.10 gi|14520360|ref|NP_125835.1| - 0.55 10.4 3.1 1.5 9.0 3.1 1.7 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) BPD_transp_1 PF00528.22 gi|14520361|ref|NP_125836.1| - 6.9e-48 162.8 18.0 6.9e-48 162.8 18.0 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component PsbI PF02532.14 gi|14520361|ref|NP_125836.1| - 0.081 12.9 0.7 0.081 12.9 0.7 3.6 4 0 0 4 4 4 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) BPD_transp_1 PF00528.22 gi|14520362|ref|NP_125837.1| - 3.4e-30 105.2 12.8 3.4e-30 105.2 12.8 2.3 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|14520362|ref|NP_125837.1| - 1.4e-18 66.6 0.4 1.4e-18 66.6 0.4 3.7 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C DUF3169 PF11368.8 gi|14520362|ref|NP_125837.1| - 4.5 6.7 11.6 0.45 10.0 7.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) ABC_tran PF00005.27 gi|14520363|ref|NP_125838.1| - 1.2e-29 103.6 0.0 1.6e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14520363|ref|NP_125838.1| - 2.7e-22 79.0 0.3 5.2e-22 78.1 0.3 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|14520363|ref|NP_125838.1| - 5.7e-07 29.6 0.4 2.3e-05 24.4 0.1 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520363|ref|NP_125838.1| - 3.6e-06 26.6 0.0 1.1e-05 25.0 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|14520363|ref|NP_125838.1| - 0.00011 22.5 0.3 0.00066 20.0 0.3 2.0 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|14520363|ref|NP_125838.1| - 0.0025 17.7 0.1 0.32 10.9 0.0 2.1 2 0 0 2 2 2 1 NACHT domain AAA PF00004.29 gi|14520363|ref|NP_125838.1| - 0.0038 17.6 0.5 0.019 15.4 0.5 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|14520363|ref|NP_125838.1| - 0.0049 16.6 0.3 0.92 9.2 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 gi|14520363|ref|NP_125838.1| - 0.012 16.0 0.0 0.023 15.1 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 gi|14520363|ref|NP_125838.1| - 0.014 15.1 0.2 0.094 12.4 0.0 2.1 2 1 0 2 2 2 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|14520363|ref|NP_125838.1| - 0.017 14.5 0.1 0.1 12.0 0.0 2.0 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|14520363|ref|NP_125838.1| - 0.02 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|14520363|ref|NP_125838.1| - 0.021 14.4 0.1 0.054 13.0 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region ATP-synt_ab PF00006.25 gi|14520363|ref|NP_125838.1| - 0.035 13.8 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 gi|14520363|ref|NP_125838.1| - 0.043 13.9 0.1 0.071 13.2 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_5 PF07728.14 gi|14520363|ref|NP_125838.1| - 0.1 12.6 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 gi|14520363|ref|NP_125838.1| - 0.11 11.9 0.6 5 6.5 0.1 2.3 2 1 0 2 2 2 0 Bacterial TniB protein AAA_10 PF12846.7 gi|14520363|ref|NP_125838.1| - 0.12 11.3 0.0 0.21 10.4 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain tRNA_lig_kinase PF08303.11 gi|14520363|ref|NP_125838.1| - 0.12 12.4 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 tRNA ligase kinase domain RNA_helicase PF00910.22 gi|14520363|ref|NP_125838.1| - 0.15 12.4 0.0 0.4 11.1 0.0 1.7 2 0 0 2 2 1 0 RNA helicase Sigma54_activat PF00158.26 gi|14520363|ref|NP_125838.1| - 0.17 11.5 0.0 0.35 10.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_ATPase PF09818.9 gi|14520363|ref|NP_125838.1| - 0.2 10.4 2.9 0.26 10.0 0.3 2.3 2 2 1 3 3 3 0 Predicted ATPase of the ABC class ABC_tran PF00005.27 gi|14520364|ref|NP_125839.1| - 2e-34 119.0 0.0 2.7e-34 118.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14520364|ref|NP_125839.1| - 5.4e-13 49.3 0.1 1e-12 48.3 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|14520364|ref|NP_125839.1| - 7.2e-06 26.0 1.6 0.00085 19.2 0.3 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520364|ref|NP_125839.1| - 0.00052 19.5 0.4 0.0016 17.9 0.4 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|14520364|ref|NP_125839.1| - 0.00085 19.6 0.2 0.0066 16.7 0.2 2.1 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|14520364|ref|NP_125839.1| - 0.011 15.5 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|14520364|ref|NP_125839.1| - 0.07 13.5 0.0 0.11 12.9 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DUF2457 PF10446.9 gi|14520364|ref|NP_125839.1| - 0.073 12.2 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) AAA_25 PF13481.6 gi|14520364|ref|NP_125839.1| - 0.076 12.6 0.6 2.5 7.6 0.6 2.3 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|14520364|ref|NP_125839.1| - 0.1 12.4 0.1 0.21 11.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain BPL_LplA_LipB PF03099.19 gi|14520365|ref|NP_125840.1| - 1.1e-21 77.1 0.0 1.6e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 gi|14520365|ref|NP_125840.1| - 3.1e-11 43.0 1.0 6.7e-11 41.9 1.0 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain DUF2283 PF10049.9 gi|14520365|ref|NP_125840.1| - 0.073 13.3 1.0 0.75 10.1 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2283) DUF4314 PF14192.6 gi|14520365|ref|NP_125840.1| - 0.11 12.4 0.1 0.35 10.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4314) ATP-cone PF03477.16 gi|14520366|ref|NP_125841.1| - 6e-09 36.3 1.7 1.5e-08 35.0 0.1 2.4 2 1 0 2 2 2 1 ATP cone domain AAA_18 PF13238.6 gi|14520366|ref|NP_125841.1| - 1.3e-05 25.8 0.1 7.1e-05 23.4 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|14520366|ref|NP_125841.1| - 0.00022 21.4 0.1 0.0013 18.9 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14520366|ref|NP_125841.1| - 0.0012 19.2 0.0 0.002 18.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|14520366|ref|NP_125841.1| - 0.0013 18.0 2.4 0.0037 16.6 0.0 2.8 3 2 1 4 4 4 1 Zeta toxin AAA PF00004.29 gi|14520366|ref|NP_125841.1| - 0.0068 16.8 0.3 0.024 15.1 0.1 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|14520366|ref|NP_125841.1| - 0.011 15.8 0.4 0.029 14.4 0.1 2.0 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 gi|14520366|ref|NP_125841.1| - 0.011 15.9 0.9 0.04 14.2 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|14520366|ref|NP_125841.1| - 0.015 14.9 0.0 0.04 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 gi|14520366|ref|NP_125841.1| - 0.017 14.9 0.2 0.063 13.0 0.0 2.0 2 0 0 2 2 2 0 Cytidylate kinase RNA_helicase PF00910.22 gi|14520366|ref|NP_125841.1| - 0.022 15.2 0.0 0.094 13.1 0.0 2.0 2 0 0 2 2 2 0 RNA helicase Spore_GerAC PF05504.11 gi|14520366|ref|NP_125841.1| - 0.022 15.0 0.4 5.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Spore germination B3/ GerAC like, C-terminal ParA PF10609.9 gi|14520366|ref|NP_125841.1| - 0.032 13.7 0.4 0.19 11.1 0.1 2.1 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|14520366|ref|NP_125841.1| - 0.048 13.7 1.3 0.21 11.7 0.2 2.3 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain T2SSE PF00437.20 gi|14520366|ref|NP_125841.1| - 0.05 12.7 0.0 0.093 11.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Rad17 PF03215.15 gi|14520366|ref|NP_125841.1| - 0.061 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|14520366|ref|NP_125841.1| - 0.075 12.9 0.1 0.25 11.2 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase AAA_17 PF13207.6 gi|14520366|ref|NP_125841.1| - 0.076 13.4 2.1 0.18 12.2 0.0 2.6 3 0 0 3 3 3 0 AAA domain APS_kinase PF01583.20 gi|14520366|ref|NP_125841.1| - 0.092 12.6 0.1 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_29 PF13555.6 gi|14520366|ref|NP_125841.1| - 0.098 12.4 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|14520366|ref|NP_125841.1| - 0.14 12.5 0.1 0.41 10.9 0.0 1.9 2 0 0 2 2 1 0 AAA domain AAA_23 PF13476.6 gi|14520366|ref|NP_125841.1| - 0.27 11.7 1.7 0.39 11.2 0.0 2.0 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 gi|14520367|ref|NP_125842.1| - 0.0032 17.1 0.1 0.0083 15.7 0.1 1.7 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Glyco_tran_WecB PF03808.13 gi|14520367|ref|NP_125842.1| - 0.0045 17.0 0.1 0.02 14.9 0.1 2.1 2 0 0 2 2 2 1 Glycosyl transferase WecB/TagA/CpsF family DUF1967 PF09269.11 gi|14520367|ref|NP_125842.1| - 0.023 14.6 0.1 4.9 7.2 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1967) DUF1611 PF07755.11 gi|14520367|ref|NP_125842.1| - 0.069 12.4 0.1 4.1 6.6 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1611_C) P-loop domain Helicase_C PF00271.31 gi|14520367|ref|NP_125842.1| - 0.095 13.1 0.0 0.4 11.0 0.0 2.0 2 0 0 2 2 2 0 Helicase conserved C-terminal domain PTS_IIB PF02302.17 gi|14520367|ref|NP_125842.1| - 0.17 12.6 0.9 4.8 7.9 0.1 3.1 3 0 0 3 3 3 0 PTS system, Lactose/Cellobiose specific IIB subunit SBP_bac_11 PF13531.6 gi|14520368|ref|NP_125843.1| - 9e-35 120.5 0.0 1.2e-34 120.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|14520368|ref|NP_125843.1| - 1.6e-16 61.2 1.7 2.8e-16 60.4 1.7 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|14520368|ref|NP_125843.1| - 0.012 15.0 0.0 0.038 13.4 0.0 1.7 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein DUF72 PF01904.18 gi|14520369|ref|NP_125844.1| - 1.6e-37 129.8 0.5 2e-37 129.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 A1_Propeptide PF07966.12 gi|14520369|ref|NP_125844.1| - 0.15 12.0 0.5 0.15 12.0 0.5 2.2 2 0 0 2 2 2 0 A1 Propeptide MFS_1 PF07690.16 gi|14520370|ref|NP_125845.1| - 5.4e-14 51.9 29.6 5.4e-14 51.9 29.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|14520370|ref|NP_125845.1| - 8.2e-05 21.6 10.0 8.2e-05 21.6 10.0 2.8 2 1 0 3 3 3 2 Sugar (and other) transporter BPD_transp_1 PF00528.22 gi|14520371|ref|NP_125846.1| - 1e-19 71.0 10.7 1e-19 71.0 10.7 2.2 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|14520372|ref|NP_125847.1| - 1.3e-35 122.9 0.0 2.6e-35 121.9 0.0 1.5 2 0 0 2 2 1 1 ABC transporter TOBE PF03459.17 gi|14520372|ref|NP_125847.1| - 2.8e-14 53.2 0.0 6.1e-14 52.1 0.0 1.6 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 gi|14520372|ref|NP_125847.1| - 1.5e-06 28.2 0.0 1.9e-05 24.7 0.0 2.3 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|14520372|ref|NP_125847.1| - 9.2e-05 22.4 1.1 0.088 12.6 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520372|ref|NP_125847.1| - 0.00037 20.0 0.0 0.45 9.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|14520372|ref|NP_125847.1| - 0.00077 19.7 0.1 0.019 15.2 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit CysA_C_terminal PF17850.1 gi|14520372|ref|NP_125847.1| - 0.0027 18.2 0.1 0.011 16.3 0.0 2.2 2 0 0 2 2 1 1 CysA C-terminal regulatory domain T2SSE PF00437.20 gi|14520372|ref|NP_125847.1| - 0.0033 16.5 0.0 0.0045 16.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 gi|14520372|ref|NP_125847.1| - 0.0061 17.1 0.1 0.011 16.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|14520372|ref|NP_125847.1| - 0.008 15.9 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain OB_MalK PF17912.1 gi|14520372|ref|NP_125847.1| - 0.0084 16.9 0.5 0.03 15.1 0.5 2.0 1 0 0 1 1 1 1 MalK OB fold domain AAA_16 PF13191.6 gi|14520372|ref|NP_125847.1| - 0.0095 16.3 0.0 0.014 15.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|14520372|ref|NP_125847.1| - 0.031 13.7 0.0 0.051 13.0 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|14520372|ref|NP_125847.1| - 0.034 13.9 0.0 0.077 12.7 0.0 1.5 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|14520372|ref|NP_125847.1| - 0.04 13.6 0.0 0.09 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|14520372|ref|NP_125847.1| - 0.058 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase FtsK_SpoIIIE PF01580.18 gi|14520372|ref|NP_125847.1| - 0.11 11.9 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|14520372|ref|NP_125847.1| - 0.11 12.8 0.0 0.23 11.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain BioY PF02632.14 gi|14520373|ref|NP_125848.1| - 6.3e-38 129.9 16.1 1e-37 129.2 16.1 1.2 1 0 0 1 1 1 1 BioY family ECF-ribofla_trS PF07155.12 gi|14520373|ref|NP_125848.1| - 0.00074 19.6 18.6 0.0021 18.1 18.6 2.0 1 1 0 1 1 1 1 ECF-type riboflavin transporter, S component ECF_trnsprt PF12822.7 gi|14520373|ref|NP_125848.1| - 0.0036 17.4 24.6 0.0076 16.4 24.6 1.6 1 1 0 1 1 1 1 ECF transporter, substrate-specific component HTH_11 PF08279.12 gi|14520374|ref|NP_125849.1| - 1.9e-14 53.3 0.5 3.7e-14 52.4 0.2 1.7 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.6 gi|14520374|ref|NP_125849.1| - 1.6e-07 30.8 0.2 5.3e-07 29.1 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding BPL_LplA_LipB PF03099.19 gi|14520374|ref|NP_125849.1| - 0.00073 19.5 0.0 0.0017 18.3 0.0 1.6 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_AsnC-type PF13404.6 gi|14520374|ref|NP_125849.1| - 0.016 15.0 0.1 0.048 13.5 0.0 1.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_39 PF14090.6 gi|14520374|ref|NP_125849.1| - 0.02 14.6 0.1 0.042 13.6 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|14520374|ref|NP_125849.1| - 0.029 14.2 0.0 0.08 12.8 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.20 gi|14520374|ref|NP_125849.1| - 0.034 14.0 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 gi|14520374|ref|NP_125849.1| - 0.05 13.4 0.9 0.27 11.1 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain MarR_2 PF12802.7 gi|14520374|ref|NP_125849.1| - 0.07 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 gi|14520374|ref|NP_125849.1| - 0.14 12.3 0.6 0.43 10.8 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain PTS_2-RNA PF01885.16 gi|14520375|ref|NP_125850.1| - 4.2e-29 101.9 0.1 4.9e-29 101.7 0.1 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PARP PF00644.20 gi|14520375|ref|NP_125850.1| - 0.0015 18.2 0.0 0.002 17.8 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain RE_R_Pab1 PF09522.10 gi|14520376|ref|NP_125851.1| - 4.5e-11 42.9 0.0 8.4e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 R.Pab1 restriction endonuclease Sigma70_r1_1 PF03979.14 gi|14520376|ref|NP_125851.1| - 0.047 13.7 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 N6_Mtase PF02384.16 gi|14520377|ref|NP_125852.1| - 1.8e-26 93.2 0.0 3.9e-26 92.1 0.0 1.5 1 1 0 1 1 1 1 N-6 DNA Methylase Methylase_S PF01420.19 gi|14520377|ref|NP_125852.1| - 2.3e-08 34.5 0.4 5.7e-08 33.2 0.4 1.7 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain Methyltransf_23 PF13489.6 gi|14520377|ref|NP_125852.1| - 3.5e-05 23.7 0.0 8.7e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14520377|ref|NP_125852.1| - 8.1e-05 23.2 0.0 0.00023 21.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.11 gi|14520377|ref|NP_125852.1| - 0.00019 21.9 0.6 0.00082 19.8 0.0 2.3 3 0 0 3 3 2 1 Eco57I restriction-modification methylase Methyltransf_25 PF13649.6 gi|14520377|ref|NP_125852.1| - 0.00051 20.7 0.0 0.0012 19.5 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|14520377|ref|NP_125852.1| - 0.0011 18.5 0.0 0.0027 17.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 gi|14520377|ref|NP_125852.1| - 0.0096 15.6 0.1 0.04 13.6 0.0 1.9 1 1 1 2 2 2 1 Putative RNA methylase family UPF0020 AdoMet_MTase PF07757.13 gi|14520377|ref|NP_125852.1| - 0.012 15.9 0.0 0.024 15.0 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Methyltransf_31 PF13847.6 gi|14520377|ref|NP_125852.1| - 0.021 14.6 0.0 0.044 13.6 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14520377|ref|NP_125852.1| - 0.029 15.1 0.0 0.067 13.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain YdjM PF04307.14 gi|14520378|ref|NP_125853.1| - 1.8e-14 53.4 1.4 2.6e-14 52.9 1.4 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|14520378|ref|NP_125853.1| - 4e-07 30.2 0.1 5.6e-07 29.7 0.1 1.2 1 0 0 1 1 1 1 Zinc dependent phospholipase C DUF4184 PF13803.6 gi|14520378|ref|NP_125853.1| - 0.012 15.3 2.0 0.27 10.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4184) DUF1129 PF06570.11 gi|14520378|ref|NP_125853.1| - 0.18 11.3 0.5 1.1 8.7 0.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) Thioredoxin_3 PF13192.6 gi|14520379|ref|NP_125854.1| - 2.6e-23 81.9 0.0 4.9e-15 55.3 0.1 2.3 2 0 0 2 2 2 2 Thioredoxin domain Thioredoxin PF00085.20 gi|14520379|ref|NP_125854.1| - 2.1e-13 50.1 0.4 5.2e-06 26.4 0.1 2.1 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 gi|14520379|ref|NP_125854.1| - 1.6e-10 41.4 6.2 8.2e-05 23.0 0.2 3.7 2 2 0 2 2 2 2 Thioredoxin-like domain ABC_transp_aux PF09822.9 gi|14520379|ref|NP_125854.1| - 1e-09 38.3 0.0 0.00046 19.7 0.0 2.0 1 1 1 2 2 2 2 ABC-type uncharacterized transport system Glutaredoxin PF00462.24 gi|14520379|ref|NP_125854.1| - 1.3e-09 38.1 1.3 6.6e-05 23.1 0.3 2.8 2 1 0 2 2 2 2 Glutaredoxin DUF836 PF05768.14 gi|14520379|ref|NP_125854.1| - 3e-06 27.6 1.4 0.00012 22.4 0.2 2.4 2 1 0 2 2 2 1 Glutaredoxin-like domain (DUF836) TraF PF13728.6 gi|14520379|ref|NP_125854.1| - 1.3e-05 25.2 0.0 0.1 12.4 0.0 2.3 2 1 0 2 2 2 2 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 gi|14520379|ref|NP_125854.1| - 5.3e-05 23.0 0.5 0.00055 19.7 0.1 2.1 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|14520379|ref|NP_125854.1| - 0.0024 18.2 1.0 22 5.5 0.1 3.9 2 2 1 3 3 3 0 Thioredoxin-like DUF393 PF04134.12 gi|14520379|ref|NP_125854.1| - 0.023 16.0 0.0 0.12 13.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF393 Herpes_heli_pri PF05774.11 gi|14520379|ref|NP_125854.1| - 0.031 14.5 0.0 0.045 14.0 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component HEPN_RES_NTD1 PF18870.1 gi|14520379|ref|NP_125854.1| - 0.059 13.6 0.0 0.82 9.9 0.0 2.3 2 0 0 2 2 2 0 HEPN/RES N-terminal domain 1 Thioredoxin_7 PF13899.6 gi|14520379|ref|NP_125854.1| - 0.072 13.3 0.0 4 7.7 0.0 2.4 2 0 0 2 2 2 0 Thioredoxin-like HTH_20 PF12840.7 gi|14520380|ref|NP_125855.1| - 3.8e-11 42.9 0.0 4e-06 26.8 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|14520380|ref|NP_125855.1| - 1.3e-06 28.2 2.1 0.0043 16.9 0.5 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|14520380|ref|NP_125855.1| - 3.6e-06 26.4 0.1 0.052 13.1 0.0 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|14520380|ref|NP_125855.1| - 0.0003 20.7 0.1 0.069 13.1 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|14520380|ref|NP_125855.1| - 0.0019 18.1 0.2 1.7 8.6 0.1 2.5 2 0 0 2 2 2 2 HTH domain HTH_AsnC-type PF13404.6 gi|14520380|ref|NP_125855.1| - 0.0029 17.4 0.1 0.056 13.3 0.0 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Sigma70_r3 PF04539.16 gi|14520380|ref|NP_125855.1| - 0.0056 16.8 0.2 0.022 14.9 0.2 2.0 1 0 0 1 1 1 1 Sigma-70 region 3 PadR PF03551.14 gi|14520380|ref|NP_125855.1| - 0.012 15.6 0.2 0.03 14.3 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family FUR PF01475.19 gi|14520380|ref|NP_125855.1| - 0.014 15.6 0.6 0.037 14.2 0.1 1.9 2 0 0 2 2 2 0 Ferric uptake regulator family HTH_34 PF13601.6 gi|14520380|ref|NP_125855.1| - 0.022 14.9 0.1 11 6.3 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|14520380|ref|NP_125855.1| - 0.027 14.3 2.3 0.033 14.1 1.1 1.9 2 0 0 2 2 2 0 TFIIE alpha subunit FeoC PF09012.10 gi|14520380|ref|NP_125855.1| - 0.054 13.6 0.3 16 5.7 0.0 2.7 3 0 0 3 3 3 0 FeoC like transcriptional regulator HTH_27 PF13463.6 gi|14520380|ref|NP_125855.1| - 0.2 12.2 0.6 32 5.1 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Fer4 PF00037.27 gi|14520381|ref|NP_125856.1| - 1.8e-16 59.2 12.4 4.5e-09 35.8 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14520381|ref|NP_125856.1| - 9.1e-12 44.5 11.1 3.2e-07 30.1 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520381|ref|NP_125856.1| - 3.2e-10 40.4 5.8 2.7e-05 24.7 0.4 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14520381|ref|NP_125856.1| - 6.2e-10 38.6 9.5 3.5e-05 23.6 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|14520381|ref|NP_125856.1| - 3e-09 36.9 19.6 4.9e-07 29.8 11.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14520381|ref|NP_125856.1| - 4.7e-09 36.2 22.5 2.6e-06 27.5 12.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14520381|ref|NP_125856.1| - 1.3e-08 35.7 8.3 0.00039 21.3 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|14520381|ref|NP_125856.1| - 4.4e-08 33.1 11.0 1.3e-07 31.7 11.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14520381|ref|NP_125856.1| - 2e-05 24.9 8.3 0.016 15.6 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|14520381|ref|NP_125856.1| - 4.3e-05 23.7 5.1 5.3e-05 23.4 5.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|14520381|ref|NP_125856.1| - 0.00012 22.5 11.5 0.018 15.6 3.3 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|14520381|ref|NP_125856.1| - 0.00017 22.1 8.3 0.084 13.4 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14520381|ref|NP_125856.1| - 0.00018 21.8 11.8 0.0058 17.0 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|14520381|ref|NP_125856.1| - 0.013 16.4 17.9 0.03 15.3 4.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|14520381|ref|NP_125856.1| - 0.15 12.2 6.6 0.26 11.4 6.6 1.5 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_15 PF13459.6 gi|14520381|ref|NP_125856.1| - 0.66 10.8 13.7 1.1 10.1 2.2 2.8 2 2 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|14520381|ref|NP_125856.1| - 0.75 10.7 13.7 1.4 9.8 2.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain FAD_binding_3 PF01494.19 gi|14520382|ref|NP_125857.1| - 6.6e-20 71.6 1.4 5.1e-18 65.4 1.4 2.6 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 gi|14520382|ref|NP_125857.1| - 1.2e-15 57.4 0.0 1.6e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein DAO PF01266.24 gi|14520382|ref|NP_125857.1| - 1.2e-12 48.2 3.8 1.6e-06 28.0 0.1 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|14520382|ref|NP_125857.1| - 1.9e-11 43.7 2.7 6.5e-06 25.5 0.6 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|14520382|ref|NP_125857.1| - 1e-10 41.6 2.5 2.5e-10 40.3 1.6 2.1 3 1 0 3 3 3 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|14520382|ref|NP_125857.1| - 8.8e-08 31.4 0.2 7.6e-05 21.7 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 gi|14520382|ref|NP_125857.1| - 1.6e-06 27.6 5.7 9.8e-06 25.0 4.7 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|14520382|ref|NP_125857.1| - 1e-05 24.9 1.3 0.00086 18.6 0.1 2.5 2 1 0 2 2 2 1 Thi4 family HI0933_like PF03486.14 gi|14520382|ref|NP_125857.1| - 0.00012 20.9 1.4 0.0042 15.9 0.2 2.2 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|14520382|ref|NP_125857.1| - 0.0003 21.0 1.8 0.00038 20.6 0.2 2.1 2 1 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|14520382|ref|NP_125857.1| - 0.0044 16.2 3.1 0.0089 15.2 0.7 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|14520382|ref|NP_125857.1| - 0.0094 15.9 0.9 0.02 14.8 0.3 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sdh5 PF03937.16 gi|14520382|ref|NP_125857.1| - 0.014 15.4 0.2 2.4 8.2 0.0 2.6 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase DUF1918 PF08940.11 gi|14520382|ref|NP_125857.1| - 0.018 14.6 0.2 0.042 13.5 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1918) BCAS2 PF05700.11 gi|14520382|ref|NP_125857.1| - 0.023 14.4 0.2 0.033 13.9 0.2 1.2 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) SE PF08491.10 gi|14520382|ref|NP_125857.1| - 0.069 12.2 0.0 0.15 11.1 0.0 1.5 2 0 0 2 2 2 0 Squalene epoxidase Pyr_redox PF00070.27 gi|14520382|ref|NP_125857.1| - 0.11 13.0 4.4 2.9 8.5 0.2 3.6 3 1 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase NAD_synthase PF02540.17 gi|14520383|ref|NP_125858.1| - 4.3e-84 281.4 0.0 5.3e-84 281.1 0.0 1.0 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|14520383|ref|NP_125858.1| - 1.2e-07 31.4 0.1 0.00014 21.4 0.1 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|14520383|ref|NP_125858.1| - 1.1e-06 27.7 0.3 0.0001 21.2 0.0 3.1 3 0 0 3 3 3 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|14520383|ref|NP_125858.1| - 0.00065 19.5 0.0 0.0007 19.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 gi|14520383|ref|NP_125858.1| - 0.0015 18.2 0.4 1.1 8.9 0.2 2.3 2 0 0 2 2 2 2 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.20 gi|14520383|ref|NP_125858.1| - 0.047 13.4 0.1 0.23 11.2 0.1 2.0 1 1 0 1 1 1 0 PP-loop family DUF296 PF03479.15 gi|14520383|ref|NP_125858.1| - 0.061 13.7 0.0 0.081 13.3 0.0 1.3 1 0 0 1 1 1 0 Plants and Prokaryotes Conserved (PCC) domain TPR_8 PF13181.6 gi|14520384|ref|NP_125859.1| - 2.9e-10 39.5 13.0 0.0014 18.7 0.4 5.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|14520384|ref|NP_125859.1| - 4.1e-08 33.4 2.4 0.12 13.2 0.1 4.8 4 1 1 5 5 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|14520384|ref|NP_125859.1| - 7.6e-08 32.8 9.1 0.025 15.1 0.1 4.4 3 1 1 5 5 4 3 Tetratricopeptide repeat TPR_21 PF09976.9 gi|14520384|ref|NP_125859.1| - 1.3e-07 31.6 3.7 1.3e-05 25.0 0.9 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat-like domain TPR_2 PF07719.17 gi|14520384|ref|NP_125859.1| - 1.5e-07 31.0 12.7 0.0027 17.7 0.2 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|14520384|ref|NP_125859.1| - 1.3e-06 28.6 8.4 0.74 10.6 0.1 4.8 4 0 0 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|14520384|ref|NP_125859.1| - 1.3e-06 28.5 3.0 0.014 15.6 0.1 3.2 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|14520384|ref|NP_125859.1| - 5.2e-06 26.1 11.8 0.0048 16.8 0.3 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|14520384|ref|NP_125859.1| - 7.9e-06 26.1 8.5 0.00024 21.3 1.6 4.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|14520384|ref|NP_125859.1| - 2.4e-05 24.9 0.2 0.26 12.0 0.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|14520384|ref|NP_125859.1| - 3.1e-05 23.5 0.6 0.00014 21.4 0.1 1.9 2 0 0 2 2 2 1 MalT-like TPR region TPR_1 PF00515.28 gi|14520384|ref|NP_125859.1| - 0.0005 19.8 0.4 0.0005 19.8 0.4 5.2 6 0 0 6 6 5 1 Tetratricopeptide repeat DUF2989 PF11207.8 gi|14520384|ref|NP_125859.1| - 0.00075 19.3 1.2 0.95 9.2 0.0 2.3 2 1 0 2 2 2 2 Protein of unknown function (DUF2989) FlaC_arch PF05377.11 gi|14520384|ref|NP_125859.1| - 0.0013 19.1 2.7 2.6 8.5 0.5 4.0 4 1 0 4 4 4 1 Flagella accessory protein C (FlaC) RPN7 PF10602.9 gi|14520384|ref|NP_125859.1| - 0.0039 16.9 1.1 0.025 14.3 0.3 2.1 2 0 0 2 2 2 1 26S proteasome subunit RPN7 ANAPC5 PF12862.7 gi|14520384|ref|NP_125859.1| - 0.015 15.3 0.2 6.7 6.9 0.1 3.0 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 SRP_TPR_like PF17004.5 gi|14520384|ref|NP_125859.1| - 0.018 15.1 6.2 0.027 14.5 1.6 2.7 2 1 1 3 3 3 0 Putative TPR-like repeat DUF3808 PF10300.9 gi|14520384|ref|NP_125859.1| - 0.026 13.3 1.0 0.7 8.6 0.3 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3808) PPR PF01535.20 gi|14520384|ref|NP_125859.1| - 0.031 14.5 1.6 26 5.4 0.0 4.2 4 0 0 4 4 3 0 PPR repeat DUF1456 PF07308.13 gi|14520384|ref|NP_125859.1| - 0.049 14.0 6.4 7 7.1 0.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF1456) DUF1910 PF08928.10 gi|14520384|ref|NP_125859.1| - 0.063 13.3 2.7 0.069 13.2 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1910) SPOB_a PF14689.6 gi|14520384|ref|NP_125859.1| - 0.078 12.7 3.8 4.1 7.2 0.3 3.5 3 0 0 3 3 3 0 Sensor_kinase_SpoOB-type, alpha-helical domain UxaC PF02614.14 gi|14520384|ref|NP_125859.1| - 0.097 11.5 0.4 0.15 10.9 0.4 1.2 1 0 0 1 1 1 0 Glucuronate isomerase TPR_4 PF07721.14 gi|14520384|ref|NP_125859.1| - 0.14 12.9 0.0 6.4 7.7 0.0 3.4 4 0 0 4 4 2 0 Tetratricopeptide repeat TAF1_subA PF14929.6 gi|14520384|ref|NP_125859.1| - 0.17 11.2 1.0 0.44 9.9 0.2 1.8 2 0 0 2 2 2 0 TAF RNA Polymerase I subunit A DUF3887 PF13026.6 gi|14520384|ref|NP_125859.1| - 0.21 12.5 4.3 1.5 9.7 0.1 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF3887) TPR_10 PF13374.6 gi|14520384|ref|NP_125859.1| - 0.24 11.3 1.5 34 4.5 0.1 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1664 PF07889.12 gi|14520384|ref|NP_125859.1| - 0.42 10.7 1.9 19 5.3 0.3 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF5104 PF17117.5 gi|14520384|ref|NP_125859.1| - 1.6 9.2 5.9 5.2 7.5 0.5 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF5104) Uteroglobin PF01099.17 gi|14520384|ref|NP_125859.1| - 2.2 8.7 6.6 11 6.5 0.1 3.0 2 1 1 3 3 3 0 Uteroglobin family PhoU PF01895.19 gi|14520384|ref|NP_125859.1| - 2.4 8.7 9.8 0.31 11.5 2.0 3.0 2 1 1 3 3 3 0 PhoU domain PNPase PF03726.14 gi|14520384|ref|NP_125859.1| - 7.5 7.1 8.1 49 4.5 0.1 3.5 2 1 1 3 3 3 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain MoaE PF02391.17 gi|14520385|ref|NP_125860.1| - 1.7e-38 131.3 0.1 2.2e-38 131.0 0.1 1.0 1 0 0 1 1 1 1 MoaE protein SPASM PF13186.6 gi|14520386|ref|NP_125861.1| - 3.1e-09 37.2 0.1 2.6e-08 34.2 0.1 2.3 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Pox_A22 PF04848.13 gi|14520386|ref|NP_125861.1| - 0.058 13.5 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Poxvirus A22 protein Arena_ncap_C PF17290.2 gi|14520386|ref|NP_125861.1| - 0.069 12.5 0.0 2.2 7.6 0.0 2.2 2 0 0 2 2 2 0 Arenavirus nucleocapsid C-terminal domain ATPase PF06745.13 gi|14520387|ref|NP_125862.1| - 1.1e-83 280.1 0.1 1.3e-83 279.9 0.1 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|14520387|ref|NP_125862.1| - 2.6e-10 40.2 0.0 4e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|14520387|ref|NP_125862.1| - 6.2e-09 35.0 0.0 8.4e-09 34.6 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein DnaB_C PF03796.15 gi|14520387|ref|NP_125862.1| - 0.00012 21.6 0.0 0.00021 20.7 0.0 1.4 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain NACHT PF05729.12 gi|14520387|ref|NP_125862.1| - 0.0007 19.5 0.1 0.011 15.6 0.0 2.2 2 0 0 2 2 2 1 NACHT domain T2SSE PF00437.20 gi|14520387|ref|NP_125862.1| - 0.00082 18.5 0.0 0.0013 17.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_14 PF13173.6 gi|14520387|ref|NP_125862.1| - 0.0011 19.0 0.0 0.0024 17.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 gi|14520387|ref|NP_125862.1| - 0.0021 17.8 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_24 PF13479.6 gi|14520387|ref|NP_125862.1| - 0.0035 17.1 0.4 0.0056 16.4 0.4 1.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|14520387|ref|NP_125862.1| - 0.0062 16.6 0.1 0.0087 16.1 0.1 1.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|14520387|ref|NP_125862.1| - 0.0065 16.8 0.2 0.016 15.6 0.2 1.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14520387|ref|NP_125862.1| - 0.0073 16.6 0.1 0.015 15.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|14520387|ref|NP_125862.1| - 0.016 14.4 0.1 0.032 13.5 0.1 1.4 1 0 0 1 1 1 0 Rad51 AAA_28 PF13521.6 gi|14520387|ref|NP_125862.1| - 0.017 15.4 0.1 0.029 14.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|14520387|ref|NP_125862.1| - 0.018 14.8 0.1 0.13 12.0 0.2 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|14520387|ref|NP_125862.1| - 0.019 14.9 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|14520387|ref|NP_125862.1| - 0.024 14.2 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|14520387|ref|NP_125862.1| - 0.028 14.1 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RecA PF00154.21 gi|14520387|ref|NP_125862.1| - 0.031 13.7 0.1 0.06 12.8 0.0 1.4 2 0 0 2 2 2 0 recA bacterial DNA recombination protein ABC_tran PF00005.27 gi|14520387|ref|NP_125862.1| - 0.04 14.4 0.5 0.087 13.3 0.4 1.5 1 1 0 1 1 1 0 ABC transporter ATP-synt_ab PF00006.25 gi|14520387|ref|NP_125862.1| - 0.046 13.4 0.0 0.07 12.8 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.6 gi|14520387|ref|NP_125862.1| - 0.055 14.0 1.5 0.32 11.6 1.5 2.2 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|14520387|ref|NP_125862.1| - 0.062 13.7 0.2 0.11 12.8 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 gi|14520387|ref|NP_125862.1| - 0.083 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF2075 PF09848.9 gi|14520387|ref|NP_125862.1| - 0.083 12.1 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|14520387|ref|NP_125862.1| - 0.087 12.5 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|14520387|ref|NP_125862.1| - 0.11 11.3 0.2 0.22 10.4 0.2 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NTPase_1 PF03266.15 gi|14520387|ref|NP_125862.1| - 0.19 11.6 2.0 0.36 10.7 1.9 1.8 1 1 0 1 1 1 0 NTPase AAA_23 PF13476.6 gi|14520387|ref|NP_125862.1| - 0.41 11.1 2.6 0.48 10.9 1.4 1.6 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|14520388|ref|NP_125863.1| - 7e-34 117.2 0.2 1e-33 116.7 0.2 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|14520388|ref|NP_125863.1| - 6.3e-06 25.9 0.0 5.2e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain Roc PF08477.13 gi|14520388|ref|NP_125863.1| - 0.00084 19.6 0.1 0.014 15.6 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase RecA PF00154.21 gi|14520388|ref|NP_125863.1| - 0.0034 16.9 0.1 0.005 16.4 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein PAXNEB PF05625.11 gi|14520388|ref|NP_125863.1| - 0.0077 15.4 0.1 0.44 9.6 0.0 2.1 2 0 0 2 2 2 1 PAXNEB protein Arf PF00025.21 gi|14520388|ref|NP_125863.1| - 0.015 14.7 0.0 0.059 12.8 0.0 1.8 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_24 PF13479.6 gi|14520388|ref|NP_125863.1| - 0.039 13.7 0.3 0.15 11.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|14520388|ref|NP_125863.1| - 0.039 14.0 0.0 0.074 13.1 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Ras PF00071.22 gi|14520388|ref|NP_125863.1| - 0.047 13.3 0.2 0.15 11.6 0.1 1.8 2 0 0 2 2 2 0 Ras family FtsK_SpoIIIE PF01580.18 gi|14520388|ref|NP_125863.1| - 0.048 13.0 0.0 0.21 10.9 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family Rad51 PF08423.11 gi|14520388|ref|NP_125863.1| - 0.07 12.4 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Rad51 tRNA_anti-codon PF01336.25 gi|14520389|ref|NP_125864.1| - 0.0014 18.6 3.9 0.15 12.1 0.1 4.2 2 2 3 5 5 5 1 OB-fold nucleic acid binding domain TctA PF01970.16 gi|14520390|ref|NP_125865.1| - 1.3e-34 119.7 32.7 2.3e-34 118.8 32.7 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family OrfB_Zn_ribbon PF07282.11 gi|14520391|ref|NP_125866.1| - 0.029 14.3 0.5 0.07 13.1 0.5 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.6 gi|14520391|ref|NP_125866.1| - 0.031 14.2 1.8 0.11 12.5 1.8 1.8 1 1 0 1 1 1 0 Nudix N-terminal Prok-RING_1 PF14446.6 gi|14520391|ref|NP_125866.1| - 0.049 13.6 0.8 0.09 12.7 0.8 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|14520391|ref|NP_125866.1| - 0.053 13.5 0.2 0.08 12.9 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|14520391|ref|NP_125866.1| - 0.16 12.1 0.8 2.2 8.5 0.0 2.4 1 1 1 2 2 2 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.12 gi|14520391|ref|NP_125866.1| - 0.99 9.7 4.3 3.1 8.2 4.3 1.8 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase TF_Zn_Ribbon PF08271.12 gi|14520391|ref|NP_125866.1| - 1.7 8.2 6.2 10 5.7 6.2 2.2 1 1 0 1 1 1 0 TFIIB zinc-binding Aldolase_II PF00596.21 gi|14520392|ref|NP_125867.1| - 8.3e-48 162.8 0.0 9.3e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain DUF3992 PF13157.6 gi|14520392|ref|NP_125867.1| - 0.14 12.9 0.0 0.26 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) DUF1926 PF09095.11 gi|14520394|ref|NP_125869.1| - 9.2e-69 232.2 0.2 2.6e-68 230.7 0.2 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF1926) Glyco_hydro_57 PF03065.15 gi|14520394|ref|NP_125869.1| - 5.7e-60 203.2 6.2 5.1e-57 193.5 1.4 2.2 1 1 1 2 2 2 2 Glycosyl hydrolase family 57 DUF1925 PF09094.11 gi|14520394|ref|NP_125869.1| - 1.8e-34 117.9 1.0 4.1e-34 116.7 1.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1925) Glyco_hydro_38N PF01074.22 gi|14520394|ref|NP_125869.1| - 1e-06 28.4 0.0 7.1e-06 25.6 0.0 2.0 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain Radical_SAM PF04055.21 gi|14520394|ref|NP_125869.1| - 0.025 15.0 0.4 12 6.2 0.0 3.1 2 1 0 2 2 2 0 Radical SAM superfamily CoA_binding_2 PF13380.6 gi|14520394|ref|NP_125869.1| - 0.082 13.4 0.0 0.3 11.6 0.0 1.9 2 0 0 2 2 2 0 CoA binding domain SBP_bac_8 PF13416.6 gi|14520395|ref|NP_125870.1| - 1.3e-52 179.4 4.8 1.8e-52 178.9 4.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|14520395|ref|NP_125870.1| - 7.4e-49 167.4 12.4 1e-48 166.9 12.4 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Herpes_UL16 PF03044.14 gi|14520395|ref|NP_125870.1| - 0.011 15.1 0.5 0.016 14.5 0.5 1.1 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family CRISPR_Cas9_WED PF18061.1 gi|14520395|ref|NP_125870.1| - 0.079 13.1 1.0 0.24 11.5 0.1 2.1 2 0 0 2 2 2 0 CRISPR-Cas9 WED domain Mucin PF01456.17 gi|14520395|ref|NP_125870.1| - 0.15 12.1 15.6 0.21 11.6 15.6 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein ORC6 PF05460.13 gi|14520395|ref|NP_125870.1| - 0.19 11.0 2.7 0.29 10.4 2.7 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Med13_C PF06333.12 gi|14520395|ref|NP_125870.1| - 1.3 8.2 6.4 2.4 7.3 6.4 1.3 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain DUF908 PF06012.12 gi|14520395|ref|NP_125870.1| - 2.3 7.5 4.2 4.1 6.7 4.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) BPD_transp_1 PF00528.22 gi|14520396|ref|NP_125871.1| - 1.7e-17 63.8 17.2 1.7e-17 63.8 17.2 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TM_PBP2_N PF16296.5 gi|14520396|ref|NP_125871.1| - 0.0036 17.4 0.2 0.0092 16.1 0.2 1.7 1 0 0 1 1 1 1 N-terminal of TM subunit in PBP-dependent ABC transporters GTA_holin_3TM PF11351.8 gi|14520396|ref|NP_125871.1| - 1 9.9 3.4 5.2 7.6 1.0 2.6 1 1 1 2 2 2 0 Holin of 3TMs, for gene-transfer release BPD_transp_1 PF00528.22 gi|14520397|ref|NP_125872.1| - 5.4e-16 58.9 27.4 5.7e-16 58.8 21.2 2.5 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Ac76 PF05814.11 gi|14520397|ref|NP_125872.1| - 0.01 15.8 0.5 0.01 15.8 0.5 3.3 4 0 0 4 4 4 0 Orf76 (Ac76) TAT_signal PF10518.9 gi|14520397|ref|NP_125872.1| - 0.11 12.3 0.1 0.11 12.3 0.1 2.3 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Glucodextran_C PF09985.9 gi|14520398|ref|NP_125873.1| - 2.8e-139 462.0 0.3 4.3e-69 232.4 0.1 2.3 2 0 0 2 2 2 2 C-terminal binding-module, SLH-like, of glucodextranase Glyco_hydro_57 PF03065.15 gi|14520398|ref|NP_125873.1| - 3.2e-109 365.0 5.4 5.1e-109 364.4 5.4 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2147 PF09917.9 gi|14520398|ref|NP_125873.1| - 0.0015 19.1 0.0 2.4 8.9 0.0 3.1 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2147) DUF5491 PF17595.2 gi|14520398|ref|NP_125873.1| - 0.026 14.9 0.4 19 5.7 0.0 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5491) MYEOV2 PF15004.6 gi|14520398|ref|NP_125873.1| - 0.04 14.4 0.1 22 5.6 0.0 2.7 2 0 0 2 2 2 0 Myeloma-overexpressed-like Secretin_N PF03958.17 gi|14520398|ref|NP_125873.1| - 0.064 13.7 0.0 11 6.6 0.0 2.5 2 0 0 2 2 2 0 Bacterial type II/III secretion system short domain Podoplanin PF05808.11 gi|14520398|ref|NP_125873.1| - 0.49 10.5 2.2 0.85 9.7 2.2 1.3 1 0 0 1 1 1 0 Podoplanin Mucin PF01456.17 gi|14520398|ref|NP_125873.1| - 1.5 8.8 19.1 2.6 8.0 19.1 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein ABC_tran PF00005.27 gi|14520399|ref|NP_125874.1| - 3.6e-32 111.7 0.0 5.7e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|14520399|ref|NP_125874.1| - 2.8e-17 63.3 0.0 9.6e-17 61.6 0.0 2.0 1 0 0 1 1 1 1 MalK OB fold domain TOBE PF03459.17 gi|14520399|ref|NP_125874.1| - 2.7e-08 34.0 0.1 7.1e-08 32.6 0.1 1.8 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|14520399|ref|NP_125874.1| - 7.9e-07 29.2 0.0 0.013 15.4 0.0 2.8 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|14520399|ref|NP_125874.1| - 8.1e-07 29.1 0.0 2.2e-06 27.8 0.0 1.8 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 gi|14520399|ref|NP_125874.1| - 0.00016 22.2 0.0 0.00055 20.5 0.0 2.0 2 0 0 2 2 1 1 CysA C-terminal regulatory domain Rad17 PF03215.15 gi|14520399|ref|NP_125874.1| - 0.0002 21.3 0.0 0.00033 20.6 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 gi|14520399|ref|NP_125874.1| - 0.00028 20.4 0.0 0.0015 18.0 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|14520399|ref|NP_125874.1| - 0.0013 19.0 0.2 0.0034 17.7 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14520399|ref|NP_125874.1| - 0.0025 18.2 0.0 0.0036 17.7 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|14520399|ref|NP_125874.1| - 0.0044 16.9 0.1 0.01 15.8 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA PF00004.29 gi|14520399|ref|NP_125874.1| - 0.011 16.2 0.0 0.031 14.7 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|14520399|ref|NP_125874.1| - 0.021 14.7 0.2 0.089 12.7 0.0 1.9 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_28 PF13521.6 gi|14520399|ref|NP_125874.1| - 0.058 13.6 0.1 0.17 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|14520399|ref|NP_125874.1| - 0.069 12.7 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|14520399|ref|NP_125874.1| - 0.08 12.4 0.5 10 5.5 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_29 PF13555.6 gi|14520399|ref|NP_125874.1| - 0.08 12.7 0.0 0.19 11.5 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|14520399|ref|NP_125874.1| - 0.098 13.1 0.1 0.24 11.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|14520399|ref|NP_125874.1| - 0.13 11.4 0.0 0.2 10.8 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 gi|14520399|ref|NP_125874.1| - 0.13 12.0 0.1 0.34 10.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|14520399|ref|NP_125874.1| - 0.13 11.8 0.1 2 7.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain DNA_primase_S PF01896.19 gi|14520400|ref|NP_125875.1| - 2.3e-13 50.6 0.0 7e-13 49.0 0.0 1.8 2 1 0 2 2 2 1 DNA primase small subunit DNA_primase_lrg PF04104.14 gi|33356669|ref|NP_125876.2| - 4e-34 118.2 0.0 8.7e-34 117.1 0.0 1.5 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit CLP1_P PF16575.5 gi|14520402|ref|NP_125877.1| - 1.9e-37 128.9 0.0 2.8e-37 128.4 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop CbiA PF01656.23 gi|14520402|ref|NP_125877.1| - 0.00015 21.8 0.0 0.00026 21.0 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain LpxK PF02606.14 gi|14520402|ref|NP_125877.1| - 0.00048 19.3 0.0 0.00077 18.7 0.0 1.2 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase MipZ PF09140.11 gi|14520402|ref|NP_125877.1| - 0.00055 19.3 0.1 0.0013 18.1 0.0 1.6 2 0 0 2 2 2 1 ATPase MipZ MobB PF03205.14 gi|14520402|ref|NP_125877.1| - 0.0011 18.8 0.1 0.0038 17.1 0.0 1.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|14520402|ref|NP_125877.1| - 0.0061 16.2 0.1 0.97 9.0 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 gi|14520402|ref|NP_125877.1| - 0.0067 16.2 0.0 0.018 14.8 0.0 1.7 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation ParA PF10609.9 gi|14520402|ref|NP_125877.1| - 0.01 15.3 0.1 0.019 14.4 0.1 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase GTP_EFTU PF00009.27 gi|14520402|ref|NP_125877.1| - 0.016 14.8 0.1 0.048 13.2 0.0 1.8 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_31 PF13614.6 gi|14520402|ref|NP_125877.1| - 0.021 14.8 0.0 0.054 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|14520402|ref|NP_125877.1| - 0.022 14.8 0.0 0.39 10.8 0.0 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 gi|14520402|ref|NP_125877.1| - 0.037 13.7 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF1611 PF07755.11 gi|14520402|ref|NP_125877.1| - 0.081 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain AAA_24 PF13479.6 gi|14520402|ref|NP_125877.1| - 0.081 12.6 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|14520402|ref|NP_125877.1| - 0.14 11.1 0.1 0.29 10.1 0.1 1.6 1 1 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MarR_2 PF12802.7 gi|14520403|ref|NP_125878.1| - 3.9e-09 36.3 0.1 7.8e-09 35.3 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|14520403|ref|NP_125878.1| - 2.3e-08 33.9 3.3 5.2e-08 32.7 0.5 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|14520403|ref|NP_125878.1| - 9.1e-08 32.0 0.4 1.9e-07 30.9 0.4 1.6 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|14520403|ref|NP_125878.1| - 2.1e-07 30.4 0.1 5.9e-07 29.0 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|14520403|ref|NP_125878.1| - 2.7e-07 30.5 0.1 2.5e-06 27.4 0.2 2.4 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14520403|ref|NP_125878.1| - 7.4e-07 28.9 0.9 1.1e-06 28.3 0.0 1.7 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|14520403|ref|NP_125878.1| - 3e-06 27.1 2.4 4.2e-06 26.6 0.3 2.5 2 1 0 2 2 2 1 HTH domain MarR PF01047.22 gi|14520403|ref|NP_125878.1| - 2.7e-05 24.0 0.3 6.4e-05 22.8 0.3 1.6 1 1 0 1 1 1 1 MarR family HTH_10 PF04967.12 gi|14520403|ref|NP_125878.1| - 9.2e-05 22.2 1.3 0.0036 17.1 0.1 2.7 3 0 0 3 3 2 1 HTH DNA binding domain LexA_DNA_bind PF01726.16 gi|14520403|ref|NP_125878.1| - 0.00063 19.5 0.2 0.0014 18.4 0.2 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_28 PF13518.6 gi|14520403|ref|NP_125878.1| - 0.00086 19.4 2.1 0.058 13.5 0.0 3.1 3 0 0 3 3 3 1 Helix-turn-helix domain TrmB PF01978.19 gi|14520403|ref|NP_125878.1| - 0.0014 18.5 0.4 0.043 13.7 0.0 2.7 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB ssDNA-exonuc_C PF10141.9 gi|14520403|ref|NP_125878.1| - 0.0015 18.2 0.0 0.0075 15.9 0.0 1.8 2 0 0 2 2 2 1 Single-strand DNA-specific exonuclease, C terminal domain HTH_34 PF13601.6 gi|14520403|ref|NP_125878.1| - 0.0016 18.6 0.0 0.0033 17.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_3 PF01381.22 gi|14520403|ref|NP_125878.1| - 0.0021 18.1 0.1 0.0086 16.1 0.0 2.1 2 0 0 2 2 1 1 Helix-turn-helix HTH_36 PF13730.6 gi|14520403|ref|NP_125878.1| - 0.0023 17.9 0.6 0.012 15.6 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|14520403|ref|NP_125878.1| - 0.0033 17.7 0.1 0.0094 16.3 0.0 1.8 2 0 0 2 2 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|14520403|ref|NP_125878.1| - 0.0059 17.1 0.5 0.021 15.3 0.5 1.9 1 1 0 1 1 1 1 Winged helix DNA-binding domain Homeodomain PF00046.29 gi|14520403|ref|NP_125878.1| - 0.018 14.8 0.4 0.042 13.7 0.4 1.7 1 0 0 1 1 1 0 Homeodomain HTH_IclR PF09339.10 gi|14520403|ref|NP_125878.1| - 0.019 14.8 0.1 0.077 12.8 0.1 2.0 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_Mga PF08280.11 gi|14520403|ref|NP_125878.1| - 0.021 14.9 0.7 0.072 13.1 0.7 1.9 1 1 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain YdaS_antitoxin PF15943.5 gi|14520403|ref|NP_125878.1| - 0.027 14.3 0.0 0.061 13.2 0.0 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sigma70_r4 PF04545.16 gi|14520403|ref|NP_125878.1| - 0.036 13.6 0.2 0.036 13.6 0.2 2.4 3 1 0 3 3 1 0 Sigma-70, region 4 AbiEii PF08843.11 gi|14520403|ref|NP_125878.1| - 0.038 13.9 0.7 0.067 13.1 0.3 1.6 1 1 0 1 1 1 0 Nucleotidyl transferase AbiEii toxin, Type IV TA system RepL PF05732.11 gi|14520403|ref|NP_125878.1| - 0.044 13.2 0.1 0.093 12.1 0.1 1.7 1 1 0 1 1 1 0 Firmicute plasmid replication protein (RepL) UPF0122 PF04297.14 gi|14520403|ref|NP_125878.1| - 0.071 13.3 1.6 2.4 8.5 0.0 2.8 2 2 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_1 PF00126.27 gi|14520403|ref|NP_125878.1| - 0.073 13.0 0.2 0.96 9.5 0.1 2.7 2 1 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family RecO_C PF02565.15 gi|14520403|ref|NP_125878.1| - 0.11 12.3 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Recombination protein O C terminal Phage_CI_repr PF07022.13 gi|14520403|ref|NP_125878.1| - 0.11 12.6 0.0 0.19 11.8 0.0 1.5 1 1 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Radical_SAM PF04055.21 gi|14520403|ref|NP_125878.1| - 0.15 12.4 1.8 0.27 11.6 0.4 1.8 1 1 1 2 2 2 0 Radical SAM superfamily Mrr_N PF14338.6 gi|14520403|ref|NP_125878.1| - 0.2 11.8 2.1 10 6.3 0.7 3.1 2 1 0 2 2 2 0 Mrr N-terminal domain MMR_HSR1 PF01926.23 gi|14520404|ref|NP_125879.1| - 5.4e-21 74.8 0.0 8e-21 74.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|14520404|ref|NP_125879.1| - 5.1e-14 52.1 0.0 5.3e-13 48.8 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|14520404|ref|NP_125879.1| - 1.6e-09 37.5 0.2 6.7e-07 29.0 0.0 2.5 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|14520404|ref|NP_125879.1| - 2.3e-08 34.1 0.3 0.00044 20.2 0.0 2.8 2 2 0 2 2 2 2 RsgA GTPase Ras PF00071.22 gi|14520404|ref|NP_125879.1| - 5.2e-05 22.9 0.1 0.063 12.9 0.0 2.2 2 0 0 2 2 2 2 Ras family Dynamin_N PF00350.23 gi|14520404|ref|NP_125879.1| - 9.1e-05 22.6 0.1 0.0003 20.9 0.1 1.7 1 1 1 2 2 2 1 Dynamin family MMR_HSR1_Xtn PF16897.5 gi|14520404|ref|NP_125879.1| - 0.00049 20.1 0.6 0.00092 19.2 0.1 1.7 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain SRPRB PF09439.10 gi|14520404|ref|NP_125879.1| - 0.00051 19.5 0.0 0.00097 18.6 0.0 1.6 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 gi|14520404|ref|NP_125879.1| - 0.00051 19.4 0.0 0.0008 18.8 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Roc PF08477.13 gi|14520404|ref|NP_125879.1| - 0.00066 19.9 0.2 0.0035 17.5 0.0 2.1 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 gi|14520404|ref|NP_125879.1| - 0.0024 17.4 0.3 0.012 15.1 0.0 2.0 2 1 0 2 2 2 1 ADP-ribosylation factor family MeaB PF03308.16 gi|14520404|ref|NP_125879.1| - 0.0054 15.8 1.3 0.47 9.4 0.3 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB PduV-EutP PF10662.9 gi|14520404|ref|NP_125879.1| - 0.0059 16.4 0.0 0.022 14.5 0.0 1.9 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MobB PF03205.14 gi|14520404|ref|NP_125879.1| - 0.035 14.0 0.1 0.061 13.2 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ATP_bind_1 PF03029.17 gi|14520404|ref|NP_125879.1| - 0.16 11.7 0.1 2.3 7.9 0.0 2.4 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|14520404|ref|NP_125879.1| - 0.18 12.3 0.2 0.25 11.9 0.2 1.5 1 1 0 1 1 1 0 ABC transporter AAA PF00004.29 gi|14520405|ref|NP_125880.1| - 1.1e-44 152.1 0.0 2.4e-44 150.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|14520405|ref|NP_125880.1| - 3.1e-14 52.5 0.3 6.2e-14 51.5 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|14520405|ref|NP_125880.1| - 3.7e-13 49.2 0.0 7.5e-13 48.2 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_16 PF13191.6 gi|14520405|ref|NP_125880.1| - 2.2e-09 37.9 0.1 0.00028 21.3 0.0 3.4 2 1 1 3 3 3 1 AAA ATPase domain Prot_ATP_OB_N PF17758.1 gi|14520405|ref|NP_125880.1| - 2.5e-07 30.3 0.0 7.8e-07 28.6 0.0 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain AAA_2 PF07724.14 gi|14520405|ref|NP_125880.1| - 3.8e-07 30.4 0.0 1.9e-06 28.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|14520405|ref|NP_125880.1| - 7.8e-07 29.2 0.1 6.6e-06 26.2 0.1 2.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|14520405|ref|NP_125880.1| - 1.1e-06 28.5 0.0 2.3e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 gi|14520405|ref|NP_125880.1| - 4e-05 23.9 0.9 0.00047 20.4 0.0 2.6 3 0 0 3 3 2 1 AAA domain DUF815 PF05673.13 gi|14520405|ref|NP_125880.1| - 9e-05 21.8 0.0 0.00025 20.3 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 gi|14520405|ref|NP_125880.1| - 0.00012 22.3 0.1 0.018 15.3 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|14520405|ref|NP_125880.1| - 0.00014 21.9 0.0 0.00094 19.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|14520405|ref|NP_125880.1| - 0.00047 20.5 0.0 0.001 19.4 0.0 1.6 1 0 0 1 1 1 1 RNA helicase NRBF2 PF08961.10 gi|14520405|ref|NP_125880.1| - 0.0015 18.2 0.2 0.0028 17.3 0.2 1.3 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator ATPase PF06745.13 gi|14520405|ref|NP_125880.1| - 0.0024 17.3 0.1 0.18 11.1 0.0 2.5 1 1 1 2 2 2 1 KaiC TIP49 PF06068.13 gi|14520405|ref|NP_125880.1| - 0.0025 17.1 0.0 0.0043 16.3 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|14520405|ref|NP_125880.1| - 0.0026 17.5 0.0 0.0059 16.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_17 PF13207.6 gi|14520405|ref|NP_125880.1| - 0.0046 17.4 0.2 0.015 15.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain HALZ PF02183.18 gi|14520405|ref|NP_125880.1| - 0.0048 17.1 4.3 0.05 13.8 1.1 2.9 2 0 0 2 2 2 1 Homeobox associated leucine zipper AAA_18 PF13238.6 gi|14520405|ref|NP_125880.1| - 0.0055 17.2 0.0 0.017 15.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|14520405|ref|NP_125880.1| - 0.0055 16.1 0.0 0.01 15.2 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|14520405|ref|NP_125880.1| - 0.006 16.4 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|14520405|ref|NP_125880.1| - 0.0083 16.1 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Prefoldin_2 PF01920.20 gi|14520405|ref|NP_125880.1| - 0.014 15.4 2.8 0.024 14.6 1.0 2.2 2 0 0 2 2 2 0 Prefoldin subunit CENP-F_leu_zip PF10473.9 gi|14520405|ref|NP_125880.1| - 0.015 15.4 0.6 0.035 14.1 0.1 1.8 2 0 0 2 2 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_25 PF13481.6 gi|14520405|ref|NP_125880.1| - 0.017 14.7 0.9 0.094 12.3 0.0 2.5 3 0 0 3 3 3 0 AAA domain ATPase_2 PF01637.18 gi|14520405|ref|NP_125880.1| - 0.02 14.8 0.1 0.68 9.8 0.0 2.4 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|14520405|ref|NP_125880.1| - 0.027 14.6 0.0 0.068 13.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|14520405|ref|NP_125880.1| - 0.027 13.7 0.0 2.7 7.1 0.0 2.6 3 0 0 3 3 3 0 KAP family P-loop domain AAA_24 PF13479.6 gi|14520405|ref|NP_125880.1| - 0.029 14.1 0.0 0.072 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|14520405|ref|NP_125880.1| - 0.03 13.6 0.0 0.064 12.5 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin Rad17 PF03215.15 gi|14520405|ref|NP_125880.1| - 0.031 14.2 0.0 0.066 13.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain Parvo_NS1 PF01057.17 gi|14520405|ref|NP_125880.1| - 0.036 13.1 0.0 0.068 12.3 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_30 PF13604.6 gi|14520405|ref|NP_125880.1| - 0.039 13.7 0.0 0.13 11.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain TMF_TATA_bd PF12325.8 gi|14520405|ref|NP_125880.1| - 0.041 14.1 2.5 0.053 13.7 1.1 1.8 2 0 0 2 2 1 0 TATA element modulatory factor 1 TATA binding ABC_tran PF00005.27 gi|14520405|ref|NP_125880.1| - 0.047 14.2 0.0 0.2 12.1 0.0 2.0 2 0 0 2 2 1 0 ABC transporter TcpS PF17456.2 gi|14520405|ref|NP_125880.1| - 0.047 13.7 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 Toxin-coregulated pilus protein S TSNAXIP1_N PF15739.5 gi|14520405|ref|NP_125880.1| - 0.048 14.0 0.7 0.12 12.7 0.7 1.6 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus ZapB PF06005.12 gi|14520405|ref|NP_125880.1| - 0.049 14.1 1.1 0.049 14.1 1.1 2.3 3 0 0 3 3 1 0 Cell division protein ZapB bZIP_1 PF00170.21 gi|14520405|ref|NP_125880.1| - 0.051 13.7 2.0 0.23 11.6 1.0 2.3 2 0 0 2 2 2 0 bZIP transcription factor Sigma54_activ_2 PF14532.6 gi|14520405|ref|NP_125880.1| - 0.052 13.7 0.0 0.16 12.1 0.0 1.8 1 1 0 1 1 1 0 Sigma-54 interaction domain Prefoldin PF02996.17 gi|14520405|ref|NP_125880.1| - 0.053 13.4 1.3 0.12 12.3 0.2 2.0 2 0 0 2 2 2 0 Prefoldin subunit AAA_7 PF12775.7 gi|14520405|ref|NP_125880.1| - 0.054 13.0 0.0 0.13 11.7 0.0 1.6 2 0 0 2 2 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|14520405|ref|NP_125880.1| - 0.08 12.6 0.1 0.78 9.4 0.0 2.6 4 0 0 4 4 2 0 Sigma-54 interaction domain NACHT PF05729.12 gi|14520405|ref|NP_125880.1| - 0.083 12.8 0.0 0.28 11.1 0.0 1.8 1 1 1 2 2 2 0 NACHT domain CorA PF01544.18 gi|14520405|ref|NP_125880.1| - 0.17 11.2 0.8 0.35 10.1 0.8 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein APG6_N PF17675.1 gi|14520405|ref|NP_125880.1| - 0.17 12.4 0.3 0.17 12.4 0.3 2.3 4 0 0 4 4 1 0 Apg6 coiled-coil region DHR10 PF18595.1 gi|14520405|ref|NP_125880.1| - 0.21 11.6 4.0 0.14 12.2 1.7 1.8 2 0 0 2 2 1 0 Designed helical repeat protein 10 domain DUF5595 PF18077.1 gi|14520405|ref|NP_125880.1| - 0.24 11.5 1.1 0.67 10.1 1.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5595) SlyX PF04102.12 gi|14520405|ref|NP_125880.1| - 0.41 11.3 3.0 0.78 10.4 0.2 2.7 3 0 0 3 3 2 0 SlyX ERM PF00769.19 gi|14520405|ref|NP_125880.1| - 2.9 7.7 6.1 0.2 11.4 0.9 1.7 2 0 0 2 2 1 0 Ezrin/radixin/moesin family ABC_tran PF00005.27 gi|14520406|ref|NP_125881.1| - 2.6e-36 125.1 0.0 4.3e-36 124.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|14520406|ref|NP_125881.1| - 2e-08 34.9 0.1 1e-07 32.7 0.0 2.3 2 0 0 2 2 2 1 MalK OB fold domain AAA_21 PF13304.6 gi|14520406|ref|NP_125881.1| - 8.1e-08 32.4 0.6 0.0049 16.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|14520406|ref|NP_125881.1| - 6.9e-05 22.5 0.0 0.0002 21.0 0.0 1.8 2 0 0 2 2 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|14520406|ref|NP_125881.1| - 0.0006 19.3 0.3 0.58 9.6 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain CysA_C_terminal PF17850.1 gi|14520406|ref|NP_125881.1| - 0.00061 20.3 0.0 0.0014 19.1 0.0 1.7 1 0 0 1 1 1 1 CysA C-terminal regulatory domain TOBE_2 PF08402.10 gi|14520406|ref|NP_125881.1| - 0.00064 19.8 0.0 0.0015 18.6 0.0 1.7 1 0 0 1 1 1 1 TOBE domain RsgA_GTPase PF03193.16 gi|14520406|ref|NP_125881.1| - 0.0055 16.6 0.1 0.014 15.3 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase T2SSE PF00437.20 gi|14520406|ref|NP_125881.1| - 0.013 14.6 0.0 0.029 13.4 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 gi|14520406|ref|NP_125881.1| - 0.015 15.6 0.1 0.031 14.7 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|14520406|ref|NP_125881.1| - 0.027 14.8 0.3 0.096 13.0 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|14520406|ref|NP_125881.1| - 0.03 13.9 0.0 0.16 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14520406|ref|NP_125881.1| - 0.047 14.2 1.5 0.096 13.2 0.2 2.0 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 gi|14520406|ref|NP_125881.1| - 0.07 12.3 0.0 0.087 12.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 gi|14520406|ref|NP_125881.1| - 0.083 12.6 0.0 0.19 11.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 gi|14520406|ref|NP_125881.1| - 0.13 11.0 0.2 8.7 5.0 0.0 3.0 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA PF00004.29 gi|14520406|ref|NP_125881.1| - 0.14 12.6 0.1 0.55 10.7 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|14520406|ref|NP_125881.1| - 0.14 11.5 0.4 2.9 7.3 0.1 2.5 1 1 1 2 2 2 0 Bacterial TniB protein sCache_3_2 PF17203.4 gi|14520406|ref|NP_125881.1| - 0.16 12.1 0.1 0.33 11.1 0.1 1.5 1 0 0 1 1 1 0 Single cache domain 3 AAA_33 PF13671.6 gi|14520406|ref|NP_125881.1| - 0.29 11.3 0.7 2.2 8.4 0.2 2.4 3 0 0 3 3 3 0 AAA domain BPD_transp_1 PF00528.22 gi|14520407|ref|NP_125882.1| - 1.3e-07 31.6 16.5 1.3e-07 31.6 16.5 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|14520408|ref|NP_125883.1| - 1.8e-12 47.3 16.3 1.8e-12 47.3 16.3 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_1 PF01547.25 gi|14520409|ref|NP_125884.1| - 6.5e-25 88.7 11.6 1.1e-24 88.0 11.4 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|14520409|ref|NP_125884.1| - 1.8e-16 60.8 6.5 3e-16 60.1 6.5 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF5578 PF17741.1 gi|14520409|ref|NP_125884.1| - 0.012 15.0 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5578) DUF4969 PF16339.5 gi|14520409|ref|NP_125884.1| - 0.026 14.9 0.1 0.41 11.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) Aminotran_1_2 PF00155.21 gi|14520410|ref|NP_125885.1| - 1e-40 140.0 0.0 1.3e-40 139.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|14520410|ref|NP_125885.1| - 3.2e-16 59.1 0.0 4.4e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 gi|14520410|ref|NP_125885.1| - 0.0092 15.3 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_3 PF00202.21 gi|14520410|ref|NP_125885.1| - 0.055 12.1 0.0 0.08 11.6 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-III IF-2B PF01008.17 gi|14520411|ref|NP_125886.1| - 2e-93 312.7 1.2 2.3e-93 312.5 1.2 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family BtrH_N PF14399.6 gi|14520411|ref|NP_125886.1| - 0.0035 17.6 0.1 3.7 7.8 0.0 2.4 2 0 0 2 2 2 2 Butirosin biosynthesis protein H, N-terminal UPF0146 PF03686.13 gi|14520412|ref|NP_125887.1| - 1.9e-34 118.3 0.4 2.2e-34 118.1 0.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) TehB PF03848.14 gi|14520412|ref|NP_125887.1| - 0.018 14.4 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Tellurite resistance protein TehB TrkA_N PF02254.18 gi|14520412|ref|NP_125887.1| - 0.051 13.8 0.0 0.074 13.3 0.0 1.2 1 0 0 1 1 1 0 TrkA-N domain DUF4916 PF16262.5 gi|14520412|ref|NP_125887.1| - 0.16 11.5 0.0 0.19 11.2 0.0 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4916) 2-Hacid_dh_C PF02826.19 gi|14520412|ref|NP_125887.1| - 0.18 11.1 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PRC PF05239.16 gi|14520413|ref|NP_125888.1| - 2.7e-14 53.0 2.8 2.9e-14 52.9 2.8 1.0 1 0 0 1 1 1 1 PRC-barrel domain ResIII PF04851.15 gi|14520414|ref|NP_125889.1| - 2.3e-18 66.8 0.0 5.3e-18 65.6 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|14520414|ref|NP_125889.1| - 4e-12 46.5 0.0 2.8e-11 43.7 0.0 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|14520414|ref|NP_125889.1| - 1.6e-07 31.3 2.2 5.8e-07 29.5 0.1 2.7 3 1 0 3 3 3 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 gi|14520414|ref|NP_125889.1| - 2.4e-07 30.7 0.0 8.1e-07 28.9 0.0 1.8 1 1 0 1 1 1 1 SWI2/SNF2 ATPase DUF2075 PF09848.9 gi|14520414|ref|NP_125889.1| - 0.0037 16.6 0.0 0.0066 15.7 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) SNF2_N PF00176.23 gi|14520414|ref|NP_125889.1| - 0.13 11.0 0.0 3 6.4 0.0 2.1 2 0 0 2 2 2 0 SNF2 family N-terminal domain Spermine_synth PF01564.17 gi|14520415|ref|NP_125890.1| - 8.7e-47 159.0 0.0 1.3e-46 158.4 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|14520415|ref|NP_125890.1| - 4.4e-14 52.1 0.1 7.8e-14 51.3 0.1 1.4 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_25 PF13649.6 gi|14520415|ref|NP_125890.1| - 0.0098 16.6 0.0 0.032 14.9 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain AAA_22 PF13401.6 gi|14520416|ref|NP_125891.1| - 1.5e-05 25.3 0.0 6.2e-05 23.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|14520416|ref|NP_125891.1| - 4.7e-05 23.4 0.1 0.00038 20.4 0.1 2.2 1 1 0 1 1 1 1 NACHT domain ATPase_2 PF01637.18 gi|14520416|ref|NP_125891.1| - 7e-05 22.9 0.2 0.00014 21.8 0.2 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea TrmB PF01978.19 gi|14520416|ref|NP_125891.1| - 0.001 18.9 0.0 0.035 14.0 0.0 2.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB AAA PF00004.29 gi|14520416|ref|NP_125891.1| - 0.0036 17.7 0.2 0.018 15.5 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|14520416|ref|NP_125891.1| - 0.0036 17.8 0.0 0.0066 17.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|14520416|ref|NP_125891.1| - 0.0045 17.4 0.0 0.009 16.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain MobB PF03205.14 gi|14520416|ref|NP_125891.1| - 0.0061 16.4 0.7 0.93 9.4 0.1 2.3 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_35 PF14516.6 gi|14520416|ref|NP_125891.1| - 0.0069 15.3 0.1 0.011 14.6 0.1 1.2 1 0 0 1 1 1 1 AAA-like domain AAA_30 PF13604.6 gi|14520416|ref|NP_125891.1| - 0.014 15.1 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|14520416|ref|NP_125891.1| - 0.02 14.1 0.1 0.09 11.9 0.0 2.1 2 1 1 3 3 3 0 NB-ARC domain AAA_14 PF13173.6 gi|14520416|ref|NP_125891.1| - 0.023 14.7 1.3 1.8 8.6 1.3 2.8 1 1 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|14520416|ref|NP_125891.1| - 0.025 14.4 0.0 0.32 10.8 0.0 2.3 2 1 0 3 3 3 0 Bacterial dnaA protein TniB PF05621.11 gi|14520416|ref|NP_125891.1| - 0.028 13.8 0.1 0.11 11.8 0.1 1.9 1 1 0 1 1 1 0 Bacterial TniB protein ResIII PF04851.15 gi|14520416|ref|NP_125891.1| - 0.044 13.8 0.0 0.085 12.8 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit SRP54 PF00448.22 gi|14520416|ref|NP_125891.1| - 0.099 12.3 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TrwB_AAD_bind PF10412.9 gi|14520416|ref|NP_125891.1| - 0.14 11.1 0.1 0.22 10.4 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain YdjM PF04307.14 gi|14520417|ref|NP_125892.1| - 1.2e-13 50.8 4.5 1.7e-13 50.2 4.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase MarC PF01914.17 gi|14520418|ref|NP_125893.1| - 1.2e-31 109.7 23.4 1.4e-31 109.5 23.4 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF1461 PF07314.11 gi|14520418|ref|NP_125893.1| - 6.5 6.6 15.0 0.079 12.9 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1461) LEA_2 PF03168.13 gi|14520419|ref|NP_125894.1| - 2.7e-14 53.5 1.1 2.2e-09 37.8 0.1 2.2 2 0 0 2 2 2 2 Late embryogenesis abundant protein DUF2139 PF09910.9 gi|14520420|ref|NP_125895.1| - 2.7e-159 529.8 0.1 3.2e-159 529.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2139) DUF366 PF04017.12 gi|14520421|ref|NP_125896.1| - 4.3e-64 215.3 0.1 5.3e-64 215.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) tRNA-synt_1f PF01921.18 gi|14520422|ref|NP_125897.1| - 1.4e-131 438.7 1.5 1.4e-131 438.7 1.5 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|14520422|ref|NP_125897.1| - 6.7e-08 32.2 0.0 0.045 13.1 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|14520422|ref|NP_125897.1| - 0.00013 20.9 0.3 0.0079 15.0 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1b PF00579.25 gi|14520422|ref|NP_125897.1| - 0.0064 15.8 0.0 0.31 10.3 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (W and Y) T-box_assoc PF16176.5 gi|14520422|ref|NP_125897.1| - 0.037 14.1 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 T-box transcription factor-associated TIP49 PF06068.13 gi|14520423|ref|NP_125898.1| - 0.17 11.1 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain Methyltransf_25 PF13649.6 gi|14520424|ref|NP_125899.1| - 5.9e-26 91.0 0.0 9.1e-26 90.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14520424|ref|NP_125899.1| - 1.4e-25 89.8 0.0 2e-25 89.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14520424|ref|NP_125899.1| - 5.2e-23 81.5 0.0 6.2e-23 81.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14520424|ref|NP_125899.1| - 7.2e-17 61.5 0.0 1.1e-16 60.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|14520424|ref|NP_125899.1| - 7.7e-15 55.1 0.0 1e-14 54.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14520424|ref|NP_125899.1| - 1.8e-14 54.2 0.0 4.7e-14 52.9 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain CMAS PF02353.20 gi|14520424|ref|NP_125899.1| - 3.1e-08 33.3 0.0 3.8e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|14520424|ref|NP_125899.1| - 1.2e-07 31.3 0.0 2e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|14520424|ref|NP_125899.1| - 3e-07 30.1 0.0 5.1e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|14520424|ref|NP_125899.1| - 4.5e-06 26.4 0.0 5.5e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.16 gi|14520424|ref|NP_125899.1| - 8.7e-06 24.6 0.0 1.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase NodS PF05401.11 gi|14520424|ref|NP_125899.1| - 2e-05 24.3 0.0 2.7e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.6 gi|14520424|ref|NP_125899.1| - 0.00037 20.5 0.0 0.00053 20.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|14520424|ref|NP_125899.1| - 0.00057 19.8 0.0 0.0012 18.7 0.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_15 PF09445.10 gi|14520424|ref|NP_125899.1| - 0.0022 17.6 0.2 0.0076 15.8 0.2 1.9 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 gi|14520424|ref|NP_125899.1| - 0.0023 18.1 0.0 0.0075 16.4 0.0 1.6 1 1 1 2 2 2 1 FtsJ-like methyltransferase CheR PF01739.18 gi|14520424|ref|NP_125899.1| - 0.0042 16.6 0.3 1.5 8.3 0.0 2.7 2 1 1 3 3 2 2 CheR methyltransferase, SAM binding domain DNA_methylase PF00145.17 gi|14520424|ref|NP_125899.1| - 0.014 14.8 0.1 0.019 14.3 0.1 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Methyltransf_2 PF00891.18 gi|14520424|ref|NP_125899.1| - 0.014 14.7 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|14520424|ref|NP_125899.1| - 0.015 14.3 0.0 0.051 12.5 0.0 1.7 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase N6_N4_Mtase PF01555.18 gi|14520424|ref|NP_125899.1| - 0.017 14.8 0.0 0.32 10.7 0.0 2.2 2 0 0 2 2 2 0 DNA methylase TPMT PF05724.11 gi|14520424|ref|NP_125899.1| - 0.023 14.4 0.0 0.06 13.0 0.0 1.7 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) UPF0020 PF01170.18 gi|14520424|ref|NP_125899.1| - 0.043 13.5 0.0 0.21 11.3 0.0 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_PK PF05891.12 gi|14520424|ref|NP_125899.1| - 0.048 13.2 0.0 0.068 12.7 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase GHMP_kinases_C PF08544.13 gi|14520425|ref|NP_125900.1| - 3e-11 43.5 0.0 7.5e-11 42.2 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal DUF1464 PF07318.12 gi|14520426|ref|NP_125901.1| - 3.4e-99 332.1 1.6 3.8e-99 331.9 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) ROK PF00480.20 gi|14520426|ref|NP_125901.1| - 0.024 14.1 0.4 0.079 12.4 0.1 1.9 2 1 0 2 2 2 0 ROK family POR PF01558.18 gi|14520427|ref|NP_125902.1| - 1.6e-33 116.2 0.0 1.9e-33 116.0 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase MFS_1 PF07690.16 gi|14520428|ref|NP_125903.1| - 2.4e-21 76.0 43.0 9.5e-12 44.5 11.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|14520428|ref|NP_125903.1| - 0.00017 20.5 17.1 0.00017 20.5 17.1 2.3 2 0 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 gi|14520428|ref|NP_125903.1| - 0.069 11.7 31.6 0.33 9.4 12.7 2.9 1 1 1 2 2 2 0 MFS/sugar transport protein PhoU PF01895.19 gi|14520429|ref|NP_125904.1| - 9.5e-18 64.5 7.0 3.2e-16 59.6 0.5 2.5 2 0 0 2 2 2 2 PhoU domain MazE_antitoxin PF04014.18 gi|14520429|ref|NP_125904.1| - 8.6e-11 41.5 1.8 1.1e-10 41.1 0.0 2.3 3 0 0 3 3 3 1 Antidote-toxin recognition MazE, bacterial antitoxin Asparaginase_2 PF01112.18 gi|14520430|ref|NP_125905.1| - 4.7e-96 321.4 6.1 5.7e-96 321.2 6.1 1.0 1 0 0 1 1 1 1 Asparaginase MFS_1 PF07690.16 gi|14520431|ref|NP_125906.1| - 1.9e-43 148.8 54.2 7.4e-38 130.4 40.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|14520431|ref|NP_125906.1| - 8.5e-09 34.7 31.7 0.0028 16.6 11.2 3.1 1 1 2 3 3 3 3 MFS_1 like family MFS_3 PF05977.13 gi|14520431|ref|NP_125906.1| - 4.6e-08 31.9 15.5 7.9e-08 31.1 15.5 1.3 1 1 0 1 1 1 1 Transmembrane secretion effector PUCC PF03209.15 gi|14520431|ref|NP_125906.1| - 2.6e-06 26.7 12.7 6.8e-06 25.3 12.7 1.8 1 0 0 1 1 1 1 PUCC protein Sugar_tr PF00083.24 gi|14520431|ref|NP_125906.1| - 0.00017 20.6 18.5 0.00017 20.6 18.5 3.2 1 1 2 3 3 3 1 Sugar (and other) transporter Transgly_assoc PF04226.13 gi|14520431|ref|NP_125906.1| - 0.00059 20.0 7.7 0.00059 20.0 7.7 3.8 4 1 2 6 6 6 1 Transglycosylase associated protein DUF3671 PF12420.8 gi|14520431|ref|NP_125906.1| - 0.74 9.9 3.0 0.55 10.3 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function Radical_SAM PF04055.21 gi|14520432|ref|NP_125907.1| - 7.3e-17 62.2 0.4 1.1e-14 55.1 0.0 2.1 2 0 0 2 2 2 2 Radical SAM superfamily TrkA_C PF02080.21 gi|14520433|ref|NP_125908.1| - 7.2e-16 57.8 0.2 1.2e-15 57.0 0.2 1.4 1 0 0 1 1 1 1 TrkA-C domain PhoU PF01895.19 gi|14520433|ref|NP_125908.1| - 3.3e-11 43.5 7.2 5.5e-11 42.8 7.2 1.4 1 0 0 1 1 1 1 PhoU domain PIN PF01850.21 gi|14520433|ref|NP_125908.1| - 0.052 14.1 1.2 0.091 13.3 1.2 1.4 1 0 0 1 1 1 0 PIN domain Haspin_kinase PF12330.8 gi|14520433|ref|NP_125908.1| - 0.08 11.9 0.8 0.1 11.5 0.8 1.2 1 0 0 1 1 1 0 Haspin like kinase domain CdvA PF18822.1 gi|14520433|ref|NP_125908.1| - 0.24 11.2 9.3 0.47 10.3 5.6 2.3 1 1 1 2 2 2 0 CdvA-like coiled-coil domain TrkA_C PF02080.21 gi|14520434|ref|NP_125909.1| - 7e-14 51.4 0.3 1.5e-13 50.3 0.3 1.6 1 0 0 1 1 1 1 TrkA-C domain PhoU PF01895.19 gi|14520434|ref|NP_125909.1| - 2.4e-11 43.9 6.2 4e-11 43.2 6.2 1.4 1 0 0 1 1 1 1 PhoU domain PhoU_div PF01865.16 gi|14520434|ref|NP_125909.1| - 0.00039 19.8 4.6 0.00059 19.2 4.6 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF47 PPR_3 PF13812.6 gi|14520434|ref|NP_125909.1| - 0.3 11.2 1.4 1.9 8.6 0.3 2.6 2 1 1 3 3 3 0 Pentatricopeptide repeat domain OPT PF03169.15 gi|14520435|ref|NP_125910.1| - 0.013 14.2 0.0 0.015 13.9 0.0 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein DUF485 PF04341.12 gi|14520435|ref|NP_125910.1| - 0.013 15.4 0.3 0.034 14.1 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF4131 PF13567.6 gi|14520435|ref|NP_125910.1| - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2207 PF09972.9 gi|14520435|ref|NP_125910.1| - 0.17 10.7 6.3 0.29 9.8 6.3 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Tmemb_55A PF09788.9 gi|14520435|ref|NP_125910.1| - 0.53 9.3 1.1 0.74 8.9 1.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A SLATT_5 PF18160.1 gi|14520435|ref|NP_125910.1| - 5.6 6.2 8.7 15 4.8 8.5 1.8 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 HemN_C PF06969.16 gi|14520436|ref|NP_125911.1| - 0.03 14.4 0.8 13 5.9 0.0 3.4 2 1 1 3 3 3 0 HemN C-terminal domain HisG_C PF08029.11 gi|14520436|ref|NP_125911.1| - 0.037 14.2 0.1 0.45 10.7 0.1 2.6 2 0 0 2 2 2 0 HisG, C-terminal domain GlutR_dimer PF00745.20 gi|14520436|ref|NP_125911.1| - 0.081 13.4 5.6 0.17 12.3 0.8 3.0 2 1 1 3 3 3 0 Glutamyl-tRNAGlu reductase, dimerisation domain PG_binding_2 PF08823.11 gi|14520436|ref|NP_125911.1| - 0.083 13.2 0.2 1 9.7 0.1 2.8 3 0 0 3 3 3 0 Putative peptidoglycan binding domain AIM24 PF01987.17 gi|14520437|ref|NP_125912.1| - 2.6e-60 203.7 0.2 2.9e-60 203.5 0.2 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 SAICAR_synt PF01259.18 gi|14520438|ref|NP_125913.1| - 4.3e-70 236.2 0.4 4.8e-70 236.1 0.4 1.0 1 0 0 1 1 1 1 SAICAR synthetase GATase_7 PF13537.6 gi|14520439|ref|NP_125914.1| - 1.1e-17 64.0 0.0 2.2e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|14520439|ref|NP_125914.1| - 2.8e-13 50.2 0.0 5.7e-13 49.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|14520439|ref|NP_125914.1| - 5.1e-09 35.8 0.1 1.1e-08 34.8 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.6 gi|14520439|ref|NP_125914.1| - 0.00031 19.7 0.0 0.00043 19.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PRTase_2 PF15609.6 gi|14520439|ref|NP_125914.1| - 0.013 15.0 0.1 0.022 14.3 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase DUF2214 PF09980.9 gi|14520440|ref|NP_125915.1| - 0.0047 16.7 1.6 0.0057 16.5 1.6 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2214) MFS_1 PF07690.16 gi|14520440|ref|NP_125915.1| - 0.012 14.5 9.5 0.016 14.2 9.5 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily tRNA-synt_2 PF00152.20 gi|14520441|ref|NP_125916.1| - 1.7e-89 300.0 0.0 2.1e-89 299.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|14520441|ref|NP_125916.1| - 1.7e-12 47.2 1.4 2.9e-12 46.4 1.4 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OST_P2 PF18235.1 gi|14520442|ref|NP_125917.1| - 7.4e-56 187.7 0.4 2.4e-55 186.1 0.2 2.0 2 0 0 2 2 2 1 Oligosaccharyltransferase Peripheral 2 domain OST_IS PF18246.1 gi|14520442|ref|NP_125917.1| - 3.9e-22 78.4 0.4 1.1e-21 76.9 0.4 1.8 1 0 0 1 1 1 1 Oligosaccharyltransferase Insert domain STT3 PF02516.14 gi|14520442|ref|NP_125917.1| - 1.2e-12 47.5 29.7 2.7e-12 46.4 29.7 1.5 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 gi|14520442|ref|NP_125917.1| - 6.9e-08 32.9 8.1 6.9e-08 32.9 8.1 3.3 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase EMP70 PF02990.16 gi|14520442|ref|NP_125917.1| - 0.013 14.2 5.8 0.0075 15.0 3.1 1.8 1 1 1 2 2 2 0 Endomembrane protein 70 Ion_trans_2 PF07885.16 gi|14520442|ref|NP_125917.1| - 5.7 7.0 12.6 1.5 8.8 5.7 3.4 2 0 0 2 2 2 0 Ion channel SIS PF01380.22 gi|14520443|ref|NP_125918.1| - 2e-58 195.9 0.2 4.5e-32 110.6 0.6 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|14520443|ref|NP_125918.1| - 7.8e-23 81.2 0.0 1.5e-22 80.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|14520443|ref|NP_125918.1| - 4.7e-19 68.5 0.0 8.2e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|14520443|ref|NP_125918.1| - 0.0014 18.7 0.0 0.0047 17.0 0.0 2.0 2 0 0 2 2 2 1 SIS domain GATase_4 PF13230.6 gi|14520443|ref|NP_125918.1| - 0.0032 16.4 0.0 0.0052 15.7 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF2846 PF11008.8 gi|14520443|ref|NP_125918.1| - 0.098 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2846) DUF4157 PF13699.6 gi|14520444|ref|NP_125919.1| - 0.00042 20.5 0.1 0.00078 19.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) Proteasome PF00227.26 gi|14520445|ref|NP_125920.1| - 1.7e-50 171.2 0.2 1.9e-50 171.0 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit GA-like PF17573.2 gi|14520445|ref|NP_125920.1| - 0.031 14.2 0.9 0.064 13.2 0.9 1.4 1 0 0 1 1 1 0 GA-like domain PmbA_TldD PF01523.16 gi|14520446|ref|NP_125921.1| - 2.2e-67 227.9 0.1 2.7e-67 227.6 0.1 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|14520447|ref|NP_125922.1| - 6.6e-43 147.5 0.5 9.6e-43 147.0 0.2 1.4 2 0 0 2 2 2 1 Putative modulator of DNA gyrase DUF257 PF03192.13 gi|14520448|ref|NP_125923.1| - 2.1e-46 158.4 6.5 2.3e-46 158.2 6.5 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 Elong_Iki1 PF10483.9 gi|14520448|ref|NP_125923.1| - 0.1 12.1 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Elongator subunit Iki1 ECF_trnsprt PF12822.7 gi|14520449|ref|NP_125924.1| - 7.1e-08 32.7 23.1 8.7e-08 32.5 23.1 1.0 1 0 0 1 1 1 1 ECF transporter, substrate-specific component Aminotran_5 PF00266.19 gi|14520450|ref|NP_125925.1| - 2.5e-141 470.9 0.0 2.9e-141 470.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|14520450|ref|NP_125925.1| - 3.6e-07 29.7 0.0 1.4e-06 27.8 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|14520450|ref|NP_125925.1| - 6.5e-06 25.6 0.0 8.3e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|14520450|ref|NP_125925.1| - 8.6e-05 21.2 0.0 0.00014 20.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|14520450|ref|NP_125925.1| - 0.00035 20.0 0.0 0.00067 19.1 0.0 1.5 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family HAD_2 PF13419.6 gi|14520451|ref|NP_125926.1| - 2.3e-16 60.4 0.0 3.1e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14520451|ref|NP_125926.1| - 4.7e-10 40.1 1.7 2e-09 38.1 0.3 2.3 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14520451|ref|NP_125926.1| - 3.5e-06 27.0 0.0 7.7e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like LDcluster4 PF18306.1 gi|33356672|ref|NP_125927.2| - 1.5e-31 109.1 0.1 1.8e-31 108.9 0.1 1.0 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|33356672|ref|NP_125927.2| - 5e-07 29.9 0.2 1.1e-06 28.7 0.0 1.6 2 0 0 2 2 2 1 Possible lysine decarboxylase TPALS PF18178.1 gi|33356672|ref|NP_125927.2| - 5.3e-06 26.1 0.4 0.012 15.1 0.1 2.3 2 1 0 2 2 2 2 TIR- and PNP-associating SLOG family LSDAT_prok PF18171.1 gi|33356672|ref|NP_125927.2| - 0.0055 16.0 0.0 0.026 13.8 0.0 1.9 2 0 0 2 2 2 1 SLOG in TRPM, prokaryote LSDAT_euk PF18139.1 gi|33356672|ref|NP_125927.2| - 0.023 14.1 0.2 0.28 10.5 0.1 2.0 2 0 0 2 2 2 0 SLOG in TRPM Rv2175c_C PF18367.1 gi|33356672|ref|NP_125927.2| - 0.048 13.7 0.1 0.59 10.3 0.0 2.2 1 1 1 2 2 2 0 Rv2175c C-terminal domain of unknown function Peptidase_M50 PF02163.22 gi|14520453|ref|NP_125928.1| - 1.2e-24 86.9 11.0 1.8e-24 86.4 6.2 3.0 2 1 1 3 3 3 1 Peptidase family M50 PDZ_2 PF13180.6 gi|14520453|ref|NP_125928.1| - 4e-13 49.5 0.0 6.9e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|14520453|ref|NP_125928.1| - 9.3e-09 35.0 0.0 1.5e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|14520453|ref|NP_125928.1| - 7.1e-07 29.5 0.0 1.4e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_1 PF12812.7 gi|14520453|ref|NP_125928.1| - 0.03 14.3 0.0 0.092 12.8 0.0 1.8 2 0 0 2 2 2 0 PDZ-like domain DUF2437 PF10370.9 gi|14520453|ref|NP_125928.1| - 0.074 13.9 0.0 0.8 10.6 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF2437) DctQ PF04290.12 gi|14520453|ref|NP_125928.1| - 0.11 12.4 0.2 0.11 12.4 0.2 2.9 4 1 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component Tricorn_PDZ PF14685.6 gi|14520453|ref|NP_125928.1| - 0.13 12.3 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Tricorn protease PDZ domain DUF3201 PF11447.8 gi|14520454|ref|NP_125929.1| - 3.3e-63 211.7 7.9 3.7e-63 211.5 7.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3201) DUF92 PF01940.16 gi|14520455|ref|NP_125930.1| - 7e-51 172.9 9.3 1.2e-50 172.2 9.3 1.3 1 1 0 1 1 1 1 Integral membrane protein DUF92 eIF-5_eIF-2B PF01873.17 gi|14520456|ref|NP_125931.1| - 0.00034 20.5 1.3 0.00034 20.5 1.3 1.6 2 0 0 2 2 2 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 gi|14520456|ref|NP_125931.1| - 0.00092 19.5 0.2 0.0015 18.9 0.2 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|14520456|ref|NP_125931.1| - 0.002 17.6 2.0 0.002 17.6 2.0 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|14520456|ref|NP_125931.1| - 0.0029 17.5 0.8 0.0048 16.8 0.8 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain UPF0547 PF10571.9 gi|14520456|ref|NP_125931.1| - 0.013 15.6 3.7 0.27 11.3 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Elf1 PF05129.13 gi|14520456|ref|NP_125931.1| - 0.02 14.9 0.1 0.037 14.1 0.1 1.5 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 gi|14520456|ref|NP_125931.1| - 0.021 14.7 1.6 0.092 12.7 1.6 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|14520456|ref|NP_125931.1| - 0.029 14.3 2.3 0.07 13.1 2.3 1.6 1 0 0 1 1 1 0 Nudix N-terminal zf-ribbon_3 PF13248.6 gi|14520456|ref|NP_125931.1| - 0.051 13.0 1.3 1.8 8.1 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|14520456|ref|NP_125931.1| - 0.053 13.3 4.0 3.4 7.5 4.0 2.4 1 1 0 1 1 1 0 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|14520456|ref|NP_125931.1| - 0.074 13.0 0.7 0.14 12.1 0.7 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HypA PF01155.19 gi|14520456|ref|NP_125931.1| - 0.076 13.0 1.7 0.52 10.4 0.1 2.4 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin_2 PF18073.1 gi|14520456|ref|NP_125931.1| - 0.077 12.7 3.2 6.6 6.5 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF2387 PF09526.10 gi|14520456|ref|NP_125931.1| - 0.17 12.1 0.3 0.34 11.1 0.3 1.5 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) DNA_RNApol_7kD PF03604.13 gi|14520456|ref|NP_125931.1| - 0.27 11.0 4.2 1 9.1 4.2 2.0 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Myosin_N PF02736.19 gi|14520456|ref|NP_125931.1| - 0.5 10.2 11.7 0.27 11.1 1.3 3.6 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain DUF35_N PF12172.8 gi|14520456|ref|NP_125931.1| - 0.53 10.2 1.9 4.5 7.3 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|14520456|ref|NP_125931.1| - 0.62 10.2 4.1 2.7 8.2 0.3 2.3 1 1 0 2 2 2 0 Zinc ribbon domain TFIIS_C PF01096.18 gi|14520456|ref|NP_125931.1| - 0.83 9.6 4.5 25 4.9 4.5 2.2 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_5 PF13719.6 gi|14520456|ref|NP_125931.1| - 1.6 8.6 4.3 2 8.2 1.7 2.6 2 1 0 2 2 2 0 zinc-ribbon domain DUF998 PF06197.13 gi|14520457|ref|NP_125932.1| - 8.2e-23 81.0 16.4 9.3e-23 80.8 16.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Nitroreductase PF00881.24 gi|14520458|ref|NP_125933.1| - 2.2e-33 115.7 0.0 2.6e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|14520458|ref|NP_125933.1| - 5.4e-08 32.7 0.2 0.0066 16.0 0.0 2.4 2 1 0 2 2 2 2 Putative TM nitroreductase Rad51 PF08423.11 gi|14520459|ref|NP_125934.1| - 1.4e-95 319.4 0.0 1.8e-95 319.0 0.0 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|14520459|ref|NP_125934.1| - 1.9e-12 47.2 0.0 4.3e-12 46.1 0.0 1.6 1 1 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 gi|14520459|ref|NP_125934.1| - 2e-11 44.3 1.9 2e-11 44.3 1.9 2.4 3 0 0 3 3 2 1 Helix-hairpin-helix domain AAA_25 PF13481.6 gi|14520459|ref|NP_125934.1| - 1.3e-09 38.0 0.0 2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|14520459|ref|NP_125934.1| - 3.2e-09 36.5 0.0 5.4e-09 35.7 0.0 1.4 1 1 0 1 1 1 1 KaiC HHH PF00633.23 gi|14520459|ref|NP_125934.1| - 1.5e-06 27.7 2.1 0.0097 15.7 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|14520459|ref|NP_125934.1| - 4.2e-05 23.7 0.0 0.00014 22.0 0.0 1.9 1 1 1 2 2 2 1 Pathogenicity locus HHH_2 PF12826.7 gi|14520459|ref|NP_125934.1| - 5.7e-05 23.1 0.9 0.00024 21.1 0.1 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|14520459|ref|NP_125934.1| - 0.00029 20.6 0.0 0.002 17.9 0.0 2.4 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda AAA_22 PF13401.6 gi|14520459|ref|NP_125934.1| - 0.0013 19.1 0.1 0.0025 18.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain IMS_HHH PF11798.8 gi|14520459|ref|NP_125934.1| - 0.0035 17.6 0.2 0.023 15.0 0.0 2.6 3 0 0 3 3 1 1 IMS family HHH motif AAA_18 PF13238.6 gi|14520459|ref|NP_125934.1| - 0.0072 16.9 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|14520459|ref|NP_125934.1| - 0.013 15.3 0.0 0.031 14.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain LpxI_C PF06230.11 gi|14520459|ref|NP_125934.1| - 0.015 15.2 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 LpxI C-terminal domain BAF PF02961.14 gi|14520459|ref|NP_125934.1| - 0.021 15.3 0.2 0.11 12.9 0.0 2.3 2 1 1 3 3 2 0 Barrier to autointegration factor AAA PF00004.29 gi|14520459|ref|NP_125934.1| - 0.03 14.7 0.5 0.15 12.5 0.0 2.3 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PAXNEB PF05625.11 gi|14520459|ref|NP_125934.1| - 0.046 12.9 0.3 0.17 11.0 0.1 1.8 2 0 0 2 2 2 0 PAXNEB protein ABC_tran PF00005.27 gi|14520459|ref|NP_125934.1| - 0.053 14.0 0.0 0.21 12.1 0.0 1.9 1 1 1 2 2 2 0 ABC transporter HTH_40 PF14493.6 gi|14520459|ref|NP_125934.1| - 0.085 13.3 0.3 0.49 10.9 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4332 PF14229.6 gi|14520459|ref|NP_125934.1| - 0.11 12.7 0.2 1.1 9.6 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4332) HHH_3 PF12836.7 gi|14520459|ref|NP_125934.1| - 0.11 12.7 0.4 9.7 6.5 0.1 2.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|14520459|ref|NP_125934.1| - 0.18 12.2 0.2 0.18 12.2 0.2 2.9 3 0 0 3 3 2 0 Helix-hairpin-helix domain Surface_antigen PF11054.8 gi|14520459|ref|NP_125934.1| - 0.21 11.2 0.0 0.32 10.6 0.0 1.2 1 0 0 1 1 1 0 Sporozoite TA4 surface antigen Methyltransf_10 PF05971.12 gi|14520460|ref|NP_125935.1| - 1.4e-09 37.8 0.0 5.2e-09 35.9 0.0 1.7 1 1 0 1 1 1 1 RNA methyltransferase Methyltransf_25 PF13649.6 gi|14520460|ref|NP_125935.1| - 8.2e-08 32.9 0.0 1.8e-07 31.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|14520460|ref|NP_125935.1| - 2.7e-07 30.3 0.0 5.7e-06 26.0 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|14520460|ref|NP_125935.1| - 5.1e-07 29.6 0.0 6.7e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|14520460|ref|NP_125935.1| - 5.6e-07 29.3 0.0 8.2e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 gi|14520460|ref|NP_125935.1| - 0.00013 22.5 0.0 0.00081 20.0 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14520460|ref|NP_125935.1| - 0.00055 20.6 0.0 0.0015 19.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14520460|ref|NP_125935.1| - 0.00069 19.6 0.0 0.0011 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|14520460|ref|NP_125935.1| - 0.0013 18.4 0.0 0.002 17.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PCMT PF01135.19 gi|14520460|ref|NP_125935.1| - 0.0017 18.1 0.0 0.0026 17.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|14520460|ref|NP_125935.1| - 0.0019 18.0 0.0 0.0052 16.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|14520460|ref|NP_125935.1| - 0.0028 16.8 0.0 0.0039 16.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.20 gi|14520460|ref|NP_125935.1| - 0.0035 16.7 0.0 0.005 16.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase ADH_zinc_N PF00107.26 gi|14520460|ref|NP_125935.1| - 0.013 15.5 0.0 0.035 14.1 0.0 1.7 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Methyltransf_4 PF02390.17 gi|14520460|ref|NP_125935.1| - 0.016 14.7 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_16 PF10294.9 gi|14520460|ref|NP_125935.1| - 0.037 13.8 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase AlaDh_PNT_C PF01262.21 gi|14520460|ref|NP_125935.1| - 0.11 11.8 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Met_10 PF02475.16 gi|14520460|ref|NP_125935.1| - 0.14 11.9 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein PALP PF00291.25 gi|14520460|ref|NP_125935.1| - 0.19 11.1 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 gi|14520462|ref|NP_125937.1| - 6.7e-26 90.5 5.4 3.4e-13 49.8 0.1 2.1 2 0 0 2 2 2 2 CBS domain PhnA_Zn_Ribbon PF08274.12 gi|14520462|ref|NP_125937.1| - 0.053 13.5 4.8 0.26 11.3 4.8 2.0 1 1 0 1 1 1 0 PhnA Zinc-Ribbon RNA_pol_Rpb2_2 PF04561.14 gi|14520462|ref|NP_125937.1| - 0.059 13.0 0.1 0.088 12.4 0.1 1.4 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 2 Rubredoxin_2 PF18073.1 gi|14520462|ref|NP_125937.1| - 0.082 12.6 0.6 4.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain PRiA4_ORF3 PF07929.11 gi|14520462|ref|NP_125937.1| - 0.1 12.3 0.2 0.28 10.9 0.1 1.7 1 1 1 2 2 2 0 Plasmid pRiA4b ORF-3-like protein DUF1788 PF08747.11 gi|14520462|ref|NP_125937.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1788) PAPS_reduct PF01507.19 gi|14520463|ref|NP_125938.1| - 1.9e-47 161.5 0.0 6.7e-47 159.8 0.0 1.9 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|14520463|ref|NP_125938.1| - 1.4e-17 63.5 2.0 3.2e-17 62.2 1.2 2.1 2 0 0 2 2 2 1 PUA domain Fer4 PF00037.27 gi|14520463|ref|NP_125938.1| - 8.5e-10 38.0 14.0 2.2e-05 24.1 4.2 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520463|ref|NP_125938.1| - 1.4e-09 38.4 12.7 3.5e-09 37.1 12.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14520463|ref|NP_125938.1| - 1.7e-07 31.3 11.2 4.7e-07 29.9 11.2 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|14520463|ref|NP_125938.1| - 2.1e-07 31.4 3.8 0.0058 17.2 0.1 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14520463|ref|NP_125938.1| - 3e-07 30.2 16.4 0.0013 18.7 2.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14520463|ref|NP_125938.1| - 6e-07 29.5 11.0 6e-07 29.5 11.0 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14520463|ref|NP_125938.1| - 7.1e-07 29.6 4.7 0.03 14.8 0.1 3.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14520463|ref|NP_125938.1| - 7.8e-07 29.1 26.0 1.4e-05 25.1 14.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14520463|ref|NP_125938.1| - 1.5e-06 28.2 16.8 0.0014 18.9 2.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain UPF0113 PF03657.13 gi|14520463|ref|NP_125938.1| - 1.1e-05 25.5 0.3 4.2e-05 23.7 0.2 2.0 2 0 0 2 2 2 1 UPF0113 PUA domain Fer4_2 PF12797.7 gi|14520463|ref|NP_125938.1| - 0.00047 20.1 20.8 0.0085 16.1 2.5 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14520463|ref|NP_125938.1| - 0.0095 16.9 2.1 0.0095 16.9 2.1 3.8 3 1 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|14520463|ref|NP_125938.1| - 0.031 15.1 5.8 0.09 13.6 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain PRD_Mga PF08270.11 gi|14520463|ref|NP_125938.1| - 0.22 11.2 0.0 0.39 10.4 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) PRD domain Fer4_3 PF12798.7 gi|14520463|ref|NP_125938.1| - 0.25 12.4 26.5 0.39 11.8 7.0 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|14520463|ref|NP_125938.1| - 1.4 9.1 11.3 9.3 6.5 11.3 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain SCIFF PF13165.6 gi|14520463|ref|NP_125938.1| - 1.5 8.8 7.2 4.6 7.2 0.4 2.4 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF tRNA-synt_2 PF00152.20 gi|14520464|ref|NP_125939.1| - 1.1e-39 136.3 0.0 1.5e-39 136.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|14520464|ref|NP_125939.1| - 0.12 11.8 0.1 4.9 6.5 0.0 2.6 3 0 0 3 3 3 0 tRNA synthetases class II core domain (F) Pribosyltran PF00156.27 gi|14520465|ref|NP_125940.1| - 1.5e-22 79.8 0.0 2.6e-22 79.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Glyoxalase_4 PF13669.6 gi|14520466|ref|NP_125941.1| - 1e-25 90.1 0.0 1.2e-25 89.9 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 gi|14520466|ref|NP_125941.1| - 9.5e-13 48.5 0.0 1e-12 48.4 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|14520466|ref|NP_125941.1| - 1.3e-10 41.7 0.0 1.5e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain DUF1338 PF07063.13 gi|14520466|ref|NP_125941.1| - 0.05 12.8 0.0 0.9 8.7 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1338) Glyoxalase_5 PF14696.6 gi|14520466|ref|NP_125941.1| - 0.083 13.1 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Osmo_CC PF08946.10 gi|14520466|ref|NP_125941.1| - 0.13 12.5 0.3 0.13 12.5 0.3 2.5 2 2 0 2 2 2 0 Osmosensory transporter coiled coil MeaB PF03308.16 gi|14520467|ref|NP_125942.1| - 1e-102 342.7 2.3 1.3e-102 342.4 2.3 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|14520467|ref|NP_125942.1| - 7.6e-08 32.1 3.2 5.6e-07 29.3 3.2 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 gi|14520467|ref|NP_125942.1| - 3.7e-05 23.3 0.1 0.00036 20.1 0.1 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 gi|14520467|ref|NP_125942.1| - 8e-05 22.6 2.7 8.4e-05 22.5 0.1 2.4 3 0 0 3 3 2 1 NTPase SRP54 PF00448.22 gi|14520467|ref|NP_125942.1| - 0.00013 21.7 1.5 0.0015 18.2 0.3 2.7 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain MobB PF03205.14 gi|14520467|ref|NP_125942.1| - 0.00021 21.2 0.1 0.0008 19.3 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.27 gi|14520467|ref|NP_125942.1| - 0.00022 21.7 0.1 0.0005 20.6 0.1 1.6 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|14520467|ref|NP_125942.1| - 0.00035 20.8 0.0 0.0014 18.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|14520467|ref|NP_125942.1| - 0.00037 20.9 0.0 0.00086 19.7 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 gi|14520467|ref|NP_125942.1| - 0.00072 19.6 0.3 0.0048 17.0 0.3 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|14520467|ref|NP_125942.1| - 0.00072 19.3 0.0 0.002 17.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|14520467|ref|NP_125942.1| - 0.0012 18.7 0.0 0.0079 16.0 0.0 2.0 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_29 PF13555.6 gi|14520467|ref|NP_125942.1| - 0.0018 18.0 0.1 0.0035 17.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain KAP_NTPase PF07693.14 gi|14520467|ref|NP_125942.1| - 0.002 17.4 0.0 0.0026 17.0 0.0 1.4 1 1 0 1 1 1 1 KAP family P-loop domain RsgA_GTPase PF03193.16 gi|14520467|ref|NP_125942.1| - 0.0024 17.8 0.0 0.026 14.4 0.0 2.3 3 0 0 3 3 2 1 RsgA GTPase AAA_18 PF13238.6 gi|14520467|ref|NP_125942.1| - 0.0037 17.8 0.1 0.0037 17.8 0.1 2.3 3 0 0 3 3 2 1 AAA domain AAA_23 PF13476.6 gi|14520467|ref|NP_125942.1| - 0.0052 17.3 1.3 0.078 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|14520467|ref|NP_125942.1| - 0.017 15.1 0.1 0.03 14.2 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|14520467|ref|NP_125942.1| - 0.017 15.3 0.1 0.043 14.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain Zeta_toxin PF06414.12 gi|14520467|ref|NP_125942.1| - 0.018 14.3 0.0 0.034 13.4 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin TrwB_AAD_bind PF10412.9 gi|14520467|ref|NP_125942.1| - 0.022 13.7 0.0 0.036 13.0 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 gi|14520467|ref|NP_125942.1| - 0.025 13.7 0.0 0.048 12.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|14520467|ref|NP_125942.1| - 0.029 14.4 0.0 0.067 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|14520467|ref|NP_125942.1| - 0.04 13.8 0.9 0.11 12.4 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_17 PF13207.6 gi|14520467|ref|NP_125942.1| - 0.041 14.3 3.7 0.05 14.0 0.1 2.7 2 1 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|14520467|ref|NP_125942.1| - 0.058 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|14520467|ref|NP_125942.1| - 0.058 13.8 0.0 0.16 12.3 0.0 1.7 2 0 0 2 2 1 0 RNA helicase DUF87 PF01935.17 gi|14520467|ref|NP_125942.1| - 0.076 13.1 0.5 0.29 11.2 0.5 2.0 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_19 PF13245.6 gi|14520467|ref|NP_125942.1| - 0.099 13.0 0.5 0.22 11.9 0.1 1.8 2 0 0 2 2 1 0 AAA domain AAA_24 PF13479.6 gi|14520467|ref|NP_125942.1| - 0.1 12.3 0.8 0.34 10.6 0.1 2.2 3 0 0 3 3 3 0 AAA domain Rad17 PF03215.15 gi|14520467|ref|NP_125942.1| - 0.1 12.5 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|14520467|ref|NP_125942.1| - 0.12 12.6 1.1 0.22 11.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|14520467|ref|NP_125942.1| - 0.14 11.9 0.1 0.22 11.2 0.1 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA PF00004.29 gi|14520467|ref|NP_125942.1| - 0.15 12.5 0.8 0.38 11.2 0.0 2.1 3 0 0 3 3 1 0 ATPase family associated with various cellular activities (AAA) B12-binding PF02310.19 gi|14520468|ref|NP_125943.1| - 1.2e-24 86.7 0.7 1.4e-24 86.5 0.7 1.1 1 0 0 1 1 1 1 B12 binding domain IMPDH PF00478.25 gi|14520468|ref|NP_125943.1| - 0.0035 16.4 0.2 0.0042 16.1 0.2 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain MoCF_biosynth PF00994.24 gi|14520468|ref|NP_125943.1| - 0.011 15.4 0.1 0.098 12.3 0.0 2.1 2 0 0 2 2 2 0 Probable molybdopterin binding domain DUF1611_N PF17396.2 gi|14520468|ref|NP_125943.1| - 0.044 14.0 0.1 0.082 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Radical_SAM PF04055.21 gi|14520468|ref|NP_125943.1| - 0.049 14.0 0.3 0.096 13.1 0.3 1.5 1 1 0 1 1 1 0 Radical SAM superfamily TPP_enzyme_N PF02776.18 gi|14520468|ref|NP_125943.1| - 0.081 12.5 0.0 4 7.0 0.0 2.2 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Nitro_FeMo-Co PF02579.17 gi|14520468|ref|NP_125943.1| - 0.1 13.0 0.7 21 5.5 0.0 2.9 2 2 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor QueC PF06508.13 gi|14520469|ref|NP_125944.1| - 6.6e-05 22.5 0.0 0.00011 21.8 0.0 1.5 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|14520469|ref|NP_125944.1| - 0.00048 19.9 0.0 0.0008 19.2 0.0 1.4 1 1 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|14520469|ref|NP_125944.1| - 0.0013 17.6 0.0 0.003 16.4 0.0 1.6 1 1 0 1 1 1 1 tRNA methyl transferase Diphthami_syn_2 PF01902.17 gi|14520469|ref|NP_125944.1| - 0.0069 15.9 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Diphthamide synthase ThiI PF02568.14 gi|14520469|ref|NP_125944.1| - 0.0088 15.7 0.0 0.047 13.3 0.0 2.1 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) RRM_Rrp7 PF17799.1 gi|14520470|ref|NP_125945.1| - 0.21 11.4 2.0 0.34 10.7 0.1 2.4 2 1 0 2 2 2 0 Rrp7 RRM-like N-terminal domain Ribosomal_L6e PF01159.19 gi|14520470|ref|NP_125945.1| - 0.99 10.0 9.1 7.1 7.2 1.9 2.7 2 0 0 2 2 2 0 Ribosomal protein L6e Phasin PF05597.11 gi|14520470|ref|NP_125945.1| - 0.99 9.4 11.1 0.12 12.4 1.3 2.9 3 0 0 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF848 PF05852.11 gi|14520470|ref|NP_125945.1| - 1.2 9.2 20.0 0.075 13.1 3.9 2.9 3 0 0 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1062 PF06353.12 gi|14520470|ref|NP_125945.1| - 3.7 8.4 11.3 0.047 14.5 1.6 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF1062) Phage_min_cap2 PF06152.11 gi|14520470|ref|NP_125945.1| - 7.3 5.4 17.5 0.99 8.2 3.3 2.6 2 1 0 2 2 2 0 Phage minor capsid protein 2 TrkA_N PF02254.18 gi|14520471|ref|NP_125946.1| - 1.7e-19 70.2 1.6 7.3e-19 68.2 1.6 2.2 1 0 0 1 1 1 1 TrkA-N domain DHHA1 PF02272.19 gi|14520471|ref|NP_125946.1| - 6.3e-17 62.3 3.5 1.5e-16 61.1 0.3 2.5 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|14520471|ref|NP_125946.1| - 4.7e-10 39.6 0.5 1e-09 38.5 0.3 1.7 2 0 0 2 2 2 1 DHH family ApbA PF02558.16 gi|14520471|ref|NP_125946.1| - 1.4e-05 24.8 0.2 2.5e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 gi|14520471|ref|NP_125946.1| - 2.9e-05 24.2 0.6 2.9e-05 24.2 0.6 2.5 2 1 1 3 3 3 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|14520471|ref|NP_125946.1| - 3.6e-05 23.2 1.3 6.9e-05 22.2 1.3 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_10 PF13460.6 gi|14520471|ref|NP_125946.1| - 0.00053 19.9 0.2 0.0011 18.9 0.2 1.5 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_7 PF13241.6 gi|14520471|ref|NP_125946.1| - 0.00071 20.0 0.5 0.0024 18.3 0.2 2.1 1 1 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|14520471|ref|NP_125946.1| - 0.00092 19.5 1.1 0.0032 17.7 0.3 2.2 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 gi|14520471|ref|NP_125946.1| - 0.0013 18.4 3.4 0.0014 18.3 0.8 2.1 2 0 0 2 2 2 1 NmrA-like family DAO PF01266.24 gi|14520471|ref|NP_125946.1| - 0.013 15.1 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase UPF0180 PF03698.13 gi|14520471|ref|NP_125946.1| - 0.013 15.6 0.2 0.036 14.2 0.2 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) GARS_N PF02844.15 gi|14520471|ref|NP_125946.1| - 0.65 10.8 2.3 6.2 7.7 1.5 2.6 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain Pterin_bind PF00809.22 gi|14520472|ref|NP_125947.1| - 5.8e-06 26.2 0.0 1.7e-05 24.7 0.0 1.8 1 0 0 1 1 1 1 Pterin binding enzyme CdhD PF03599.16 gi|14520472|ref|NP_125947.1| - 0.00042 19.1 0.0 0.11 11.2 0.0 2.4 2 0 0 2 2 2 2 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF4346 PF14251.6 gi|14520472|ref|NP_125947.1| - 0.0012 18.9 0.0 0.0021 18.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) UPF0113 PF03657.13 gi|14520473|ref|NP_125948.1| - 5.6e-16 58.6 0.1 9.2e-16 57.9 0.1 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain UPF0113_N PF17833.1 gi|14520473|ref|NP_125948.1| - 4.5e-07 30.3 0.0 8.1e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 UPF0113 Pre-PUA domain SDH_sah PF01972.16 gi|14520474|ref|NP_125949.1| - 9.1e-155 513.8 0.2 1e-154 513.7 0.2 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|14520474|ref|NP_125949.1| - 1.9e-07 31.1 0.1 1.5e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Clp protease ECH_1 PF00378.20 gi|14520474|ref|NP_125949.1| - 0.0017 17.7 0.0 0.005 16.2 0.0 1.7 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|14520474|ref|NP_125949.1| - 0.0039 17.2 0.0 0.0073 16.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 Mg296 PF09644.10 gi|14520474|ref|NP_125949.1| - 0.051 13.7 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Mg296 protein Ku_PK_bind PF08785.11 gi|14520474|ref|NP_125949.1| - 0.16 12.1 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Ku C terminal domain like MASE2 PF05230.11 gi|14520474|ref|NP_125949.1| - 0.19 11.8 1.8 0.23 11.6 0.4 1.8 2 0 0 2 2 2 0 MASE2 domain HTH_38 PF13936.6 gi|33356674|ref|NP_125950.2| - 2.9e-06 26.9 0.4 9.3e-06 25.3 0.4 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain ADIP PF11559.8 gi|33356674|ref|NP_125950.2| - 5.9e-05 23.2 13.5 5.9e-05 23.2 13.5 2.9 2 1 1 3 3 2 1 Afadin- and alpha -actinin-Binding HTH_23 PF13384.6 gi|33356674|ref|NP_125950.2| - 9e-05 22.2 0.1 0.00022 20.9 0.1 1.7 1 0 0 1 1 1 1 Homeodomain-like domain MAD PF05557.13 gi|33356674|ref|NP_125950.2| - 0.00013 20.5 43.7 0.00017 20.2 43.7 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein Spc7 PF08317.11 gi|33356674|ref|NP_125950.2| - 0.00013 21.0 47.8 0.011 14.6 29.9 2.4 1 1 1 2 2 2 2 Spc7 kinetochore protein HTH_20 PF12840.7 gi|33356674|ref|NP_125950.2| - 0.00014 21.9 0.4 0.00043 20.3 0.0 2.0 2 1 0 2 2 1 1 Helix-turn-helix domain XhlA PF10779.9 gi|33356674|ref|NP_125950.2| - 0.00016 21.8 9.1 0.00016 21.8 9.1 4.6 1 1 4 5 5 4 1 Haemolysin XhlA PhaP_Bmeg PF09602.10 gi|33356674|ref|NP_125950.2| - 0.00023 21.1 25.8 0.00042 20.3 25.8 1.5 1 0 0 1 1 1 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Sigma70_r4_2 PF08281.12 gi|33356674|ref|NP_125950.2| - 0.00043 19.9 0.1 0.0013 18.4 0.1 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|33356674|ref|NP_125950.2| - 0.00044 20.2 0.1 0.0011 19.0 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn helix Tropomyosin_1 PF12718.7 gi|33356674|ref|NP_125950.2| - 0.0005 20.2 51.5 0.0083 16.3 51.5 2.4 1 1 0 1 1 1 1 Tropomyosin like HTH_11 PF08279.12 gi|33356674|ref|NP_125950.2| - 0.00059 19.7 0.1 0.0027 17.6 0.1 2.2 1 0 0 1 1 1 1 HTH domain Baculo_PEP_C PF04513.12 gi|33356674|ref|NP_125950.2| - 0.00076 19.5 2.8 0.05 13.6 0.2 3.2 1 1 2 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus GAS PF13851.6 gi|33356674|ref|NP_125950.2| - 0.00084 18.7 47.9 0.013 14.9 21.2 2.4 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.11 gi|33356674|ref|NP_125950.2| - 0.00087 19.6 7.6 0.00087 19.6 7.6 5.7 3 1 2 5 5 4 2 Flagella accessory protein C (FlaC) HTH_24 PF13412.6 gi|33356674|ref|NP_125950.2| - 0.0011 18.5 0.0 0.0035 16.9 0.0 2.0 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|33356674|ref|NP_125950.2| - 0.0013 18.6 0.3 0.0033 17.3 0.3 1.8 1 1 0 1 1 1 1 MarR family Laminin_II PF06009.12 gi|33356674|ref|NP_125950.2| - 0.0013 18.8 27.4 0.012 15.7 17.5 3.1 1 1 2 3 3 3 2 Laminin Domain II Jnk-SapK_ap_N PF09744.9 gi|33356674|ref|NP_125950.2| - 0.0013 19.0 50.4 0.011 16.0 20.4 2.5 1 1 1 2 2 2 2 JNK_SAPK-associated protein-1 HTH_28 PF13518.6 gi|33356674|ref|NP_125950.2| - 0.0014 18.7 0.1 0.0036 17.4 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain NPV_P10 PF05531.12 gi|33356674|ref|NP_125950.2| - 0.0014 19.0 9.4 0.42 11.1 1.5 3.7 1 1 2 3 3 3 1 Nucleopolyhedrovirus P10 protein Phage_GP20 PF06810.11 gi|33356674|ref|NP_125950.2| - 0.0021 17.9 42.7 0.0042 16.9 18.4 3.4 1 1 2 3 3 3 2 Phage minor structural protein GP20 LPP PF04728.13 gi|33356674|ref|NP_125950.2| - 0.003 17.9 10.8 0.8 10.1 0.2 4.2 2 2 2 4 4 4 1 Lipoprotein leucine-zipper GerE PF00196.19 gi|33356674|ref|NP_125950.2| - 0.0038 16.8 0.0 0.0092 15.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family DUF3584 PF12128.8 gi|33356674|ref|NP_125950.2| - 0.004 14.8 27.1 0.0046 14.6 27.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) HTH_31 PF13560.6 gi|33356674|ref|NP_125950.2| - 0.0065 16.8 0.9 0.027 14.8 0.9 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_Tc3_1 PF11427.8 gi|33356674|ref|NP_125950.2| - 0.0069 16.2 0.8 0.15 12.0 0.0 3.3 2 1 2 4 4 2 1 Tc3 transposase HTH_5 PF01022.20 gi|33356674|ref|NP_125950.2| - 0.0074 16.1 0.5 0.048 13.5 0.0 2.6 3 0 0 3 3 1 1 Bacterial regulatory protein, arsR family BLOC1_2 PF10046.9 gi|33356674|ref|NP_125950.2| - 0.0074 16.6 38.2 0.28 11.5 13.2 3.5 2 1 1 3 3 3 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin_2 PF14523.6 gi|33356674|ref|NP_125950.2| - 0.014 15.7 22.9 0.44 11.0 1.6 3.4 1 1 2 3 3 3 0 Syntaxin-like protein BRE1 PF08647.11 gi|33356674|ref|NP_125950.2| - 0.019 15.0 16.1 0.019 15.0 16.1 3.1 2 1 1 3 3 1 0 BRE1 E3 ubiquitin ligase HemX PF04375.14 gi|33356674|ref|NP_125950.2| - 0.028 13.7 23.2 0.063 12.6 8.6 2.2 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3450 PF11932.8 gi|33356674|ref|NP_125950.2| - 0.031 13.6 29.0 0.23 10.8 10.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ABC_tran_CTD PF16326.5 gi|33356674|ref|NP_125950.2| - 0.032 14.5 24.4 0.032 14.5 24.4 4.2 1 1 2 3 3 3 0 ABC transporter C-terminal domain TolA_bind_tri PF16331.5 gi|33356674|ref|NP_125950.2| - 0.035 14.2 14.5 0.14 12.2 2.1 3.5 1 1 2 3 3 3 0 TolA binding protein trimerisation DUF1664 PF07889.12 gi|33356674|ref|NP_125950.2| - 0.037 14.1 25.0 0.096 12.7 5.6 2.7 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) KorB PF08535.10 gi|33356674|ref|NP_125950.2| - 0.046 13.8 0.0 0.046 13.8 0.0 3.1 1 1 2 3 3 3 0 KorB domain HTH_IclR PF09339.10 gi|33356674|ref|NP_125950.2| - 0.06 13.2 0.1 0.13 12.1 0.1 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF3829 PF12889.7 gi|33356674|ref|NP_125950.2| - 0.098 12.1 25.2 0.25 10.8 24.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) DHR10 PF18595.1 gi|33356674|ref|NP_125950.2| - 0.13 12.4 54.8 0.042 13.9 17.2 3.6 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain WXG100 PF06013.12 gi|33356674|ref|NP_125950.2| - 0.14 12.4 7.5 9.3 6.6 0.0 4.3 2 1 2 5 5 3 0 Proteins of 100 residues with WXG Plasmid_RAQPRD PF09686.10 gi|33356674|ref|NP_125950.2| - 0.14 12.4 8.2 15 5.9 1.5 4.1 3 1 1 4 4 4 0 Plasmid protein of unknown function (Plasmid_RAQPRD) Uds1 PF15456.6 gi|33356674|ref|NP_125950.2| - 0.15 12.2 39.4 0.019 15.2 27.3 3.0 2 1 1 3 3 2 0 Up-regulated During Septation CENP-F_leu_zip PF10473.9 gi|33356674|ref|NP_125950.2| - 0.16 12.0 56.2 0.22 11.5 44.4 2.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fib_alpha PF08702.10 gi|33356674|ref|NP_125950.2| - 0.17 12.1 25.1 0.033 14.4 17.8 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family SpecificRecomb PF10136.9 gi|33356674|ref|NP_125950.2| - 0.17 10.1 7.0 0.22 9.8 7.0 1.2 1 0 0 1 1 1 0 Site-specific recombinase Spectrin PF00435.21 gi|33356674|ref|NP_125950.2| - 0.19 12.2 34.5 49 4.5 2.4 3.6 1 1 1 2 2 1 0 Spectrin repeat AAA_13 PF13166.6 gi|33356674|ref|NP_125950.2| - 0.26 9.9 38.9 1.9 7.1 37.3 2.0 1 1 1 2 2 2 0 AAA domain FapA PF03961.13 gi|33356674|ref|NP_125950.2| - 0.32 9.5 42.3 2.4 6.7 25.2 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF4559 PF15112.6 gi|33356674|ref|NP_125950.2| - 0.35 10.5 19.7 0.46 10.1 19.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Snapin_Pallidin PF14712.6 gi|33356674|ref|NP_125950.2| - 0.39 11.2 25.9 0.39 11.2 3.4 3.4 1 1 2 3 3 3 0 Snapin/Pallidin DUF4407 PF14362.6 gi|33356674|ref|NP_125950.2| - 0.41 10.0 24.1 7 5.9 23.5 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Occludin_ELL PF07303.13 gi|33356674|ref|NP_125950.2| - 0.42 11.4 33.7 3.5 8.4 0.9 3.4 2 1 2 4 4 3 0 Occludin homology domain TMPIT PF07851.13 gi|33356674|ref|NP_125950.2| - 0.43 9.8 31.0 2 7.5 11.6 2.3 1 1 1 2 2 2 0 TMPIT-like protein Seryl_tRNA_N PF02403.22 gi|33356674|ref|NP_125950.2| - 0.54 10.5 48.1 0.44 10.8 19.5 3.1 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain DUF4446 PF14584.6 gi|33356674|ref|NP_125950.2| - 0.57 10.2 27.0 1.8 8.6 8.2 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF16 PF01519.16 gi|33356674|ref|NP_125950.2| - 0.6 10.6 36.8 5 7.7 15.0 3.6 1 1 2 3 3 3 0 Protein of unknown function DUF16 DUF4600 PF15372.6 gi|33356674|ref|NP_125950.2| - 0.62 10.5 39.1 0.1 13.0 16.6 3.3 1 1 3 4 4 3 0 Domain of unknown function (DUF4600) DUF948 PF06103.11 gi|33356674|ref|NP_125950.2| - 0.64 10.3 16.1 4.1e+03 -1.9 16.0 3.8 1 1 0 1 1 0 0 Bacterial protein of unknown function (DUF948) YkyA PF10368.9 gi|33356674|ref|NP_125950.2| - 0.66 9.6 47.9 0.43 10.2 3.1 2.5 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DUF724 PF05266.14 gi|33356674|ref|NP_125950.2| - 0.73 9.6 42.5 1.3 8.8 16.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Atg14 PF10186.9 gi|33356674|ref|NP_125950.2| - 0.74 8.8 35.2 0.86 8.6 14.6 2.2 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 gi|33356674|ref|NP_125950.2| - 0.8 9.2 23.9 1.8 8.1 23.9 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit HTH_40 PF14493.6 gi|33356674|ref|NP_125950.2| - 0.82 10.2 26.0 3.8e+02 1.6 26.0 3.8 1 1 0 1 1 1 0 Helix-turn-helix domain TraF_2 PF13729.6 gi|33356674|ref|NP_125950.2| - 0.83 9.0 4.9 7.2 5.9 0.4 2.3 1 1 0 2 2 2 0 F plasmid transfer operon, TraF, protein V_ATPase_I PF01496.19 gi|33356674|ref|NP_125950.2| - 0.84 7.5 29.8 0.062 11.2 13.1 2.1 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family TPR_MLP1_2 PF07926.12 gi|33356674|ref|NP_125950.2| - 0.89 9.6 50.4 6 6.9 17.2 3.8 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Ax_dynein_light PF10211.9 gi|33356674|ref|NP_125950.2| - 0.92 9.4 48.5 2.8 7.9 16.2 3.2 1 1 1 2 2 2 0 Axonemal dynein light chain Rho_Binding PF08912.11 gi|33356674|ref|NP_125950.2| - 1.1 10.1 51.0 0.27 12.1 6.9 4.6 1 1 3 4 4 4 0 Rho Binding STAT_alpha PF01017.20 gi|33356674|ref|NP_125950.2| - 1.2 9.1 25.2 0.058 13.3 3.8 3.0 1 1 2 3 3 3 0 STAT protein, all-alpha domain MbeD_MobD PF04899.12 gi|33356674|ref|NP_125950.2| - 1.2 9.3 11.4 9.7 6.4 2.3 3.0 2 1 0 2 2 2 0 MbeD/MobD like Fmp27_WPPW PF10359.9 gi|33356674|ref|NP_125950.2| - 1.3 7.8 31.6 0.07 12.0 8.1 2.3 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain Sec34 PF04136.15 gi|33356674|ref|NP_125950.2| - 1.3 8.9 24.8 0.68 9.8 7.0 3.0 1 1 2 3 3 3 0 Sec34-like family FAM184 PF15665.5 gi|33356674|ref|NP_125950.2| - 1.3 8.7 42.9 1.4 8.6 13.5 3.1 1 1 2 3 3 3 0 Family with sequence similarity 184, A and B Nup54 PF13874.6 gi|33356674|ref|NP_125950.2| - 1.4 9.0 28.2 46 4.1 25.1 2.5 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 CENP-K PF11802.8 gi|33356674|ref|NP_125950.2| - 1.5 8.4 42.5 0.56 9.7 40.0 1.5 2 0 0 2 2 1 0 Centromere-associated protein K APG6_N PF17675.1 gi|33356674|ref|NP_125950.2| - 1.5 9.4 60.1 5.9 7.4 24.3 2.8 1 1 1 2 2 2 0 Apg6 coiled-coil region Prominin PF05478.11 gi|33356674|ref|NP_125950.2| - 1.5 6.7 22.3 6 4.7 21.4 2.0 1 1 0 1 1 1 0 Prominin ATG16 PF08614.11 gi|33356674|ref|NP_125950.2| - 1.7 8.9 39.9 2.4e+02 1.8 39.9 2.5 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DASH_Dam1 PF08653.10 gi|33356674|ref|NP_125950.2| - 1.8 8.5 6.8 27 4.7 0.3 3.5 3 1 1 4 4 3 0 DASH complex subunit Dam1 Golgin_A5 PF09787.9 gi|33356674|ref|NP_125950.2| - 2.1 7.7 38.7 1.4 8.4 35.7 1.8 1 1 0 1 1 1 0 Golgin subfamily A member 5 SlyX PF04102.12 gi|33356674|ref|NP_125950.2| - 2.1 9.0 20.8 5.5 7.7 7.2 4.3 1 1 2 3 3 3 0 SlyX DUF4988 PF16378.5 gi|33356674|ref|NP_125950.2| - 2.2 7.9 9.7 8.8 6.0 2.2 3.1 2 2 0 2 2 2 0 Domain of unknown function Cob_adeno_trans PF01923.18 gi|33356674|ref|NP_125950.2| - 2.3 8.4 18.6 2.7 8.1 4.0 2.8 1 1 2 3 3 3 0 Cobalamin adenosyltransferase HAUS-augmin3 PF14932.6 gi|33356674|ref|NP_125950.2| - 2.3 7.7 38.2 0.87 9.1 12.5 2.3 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 ZapB PF06005.12 gi|33356674|ref|NP_125950.2| - 2.4 8.7 54.1 1 9.9 15.0 4.4 1 1 2 3 3 2 0 Cell division protein ZapB DUF812 PF05667.11 gi|33356674|ref|NP_125950.2| - 2.4 6.9 45.7 0.61 8.9 15.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF812) GldM_N PF12081.8 gi|33356674|ref|NP_125950.2| - 2.6 8.1 31.8 0.89 9.6 4.9 2.5 1 1 1 2 2 2 0 GldM N-terminal domain Baculo_F PF12259.8 gi|33356674|ref|NP_125950.2| - 3.2 6.2 16.1 6.2 5.2 7.7 2.1 1 1 1 2 2 2 0 Baculovirus F protein Herpes_UL6 PF01763.16 gi|33356674|ref|NP_125950.2| - 3.2 6.2 21.3 5.2 5.5 4.4 2.4 1 1 1 2 2 2 0 Herpesvirus UL6 like Nsp1_C PF05064.13 gi|33356674|ref|NP_125950.2| - 3.5 7.5 32.5 0.51 10.1 6.8 3.7 1 1 2 3 3 3 0 Nsp1-like C-terminal region IFT57 PF10498.9 gi|33356674|ref|NP_125950.2| - 3.6 6.5 36.5 3.3 6.6 14.8 2.3 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Med4 PF10018.9 gi|33356674|ref|NP_125950.2| - 3.6 7.2 34.3 6.3 6.4 14.0 3.5 1 1 3 4 4 4 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF5082 PF16888.5 gi|33356674|ref|NP_125950.2| - 4 7.7 31.2 5.3 7.3 1.6 3.2 2 1 1 3 3 2 0 Domain of unknown function (DUF5082) CLZ PF16526.5 gi|33356674|ref|NP_125950.2| - 4.1 7.8 39.4 0.75 10.2 7.9 4.6 1 1 3 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4164 PF13747.6 gi|33356674|ref|NP_125950.2| - 4.6 7.6 34.7 54 4.2 13.2 4.3 2 1 2 4 4 4 0 Domain of unknown function (DUF4164) DUF4795 PF16043.5 gi|33356674|ref|NP_125950.2| - 5.4 6.6 38.4 72 2.9 37.9 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Spc24 PF08286.11 gi|33356674|ref|NP_125950.2| - 5.4 7.3 37.1 0.44 10.8 8.0 3.8 1 1 2 3 3 3 0 Spc24 subunit of Ndc80 DUF745 PF05335.13 gi|33356674|ref|NP_125950.2| - 5.9 6.6 27.5 1.1 8.9 4.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF745) CREPT PF16566.5 gi|33356674|ref|NP_125950.2| - 7.7 6.7 34.1 0.81 9.8 12.1 2.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour PspA_IM30 PF04012.12 gi|33356674|ref|NP_125950.2| - 8.7 5.9 45.6 0.93 9.0 30.8 2.6 1 1 1 2 2 2 0 PspA/IM30 family DUF4618 PF15397.6 gi|33356674|ref|NP_125950.2| - 8.8 5.7 42.4 2 7.8 11.9 3.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) DASH_Spc19 PF08287.11 gi|33356674|ref|NP_125950.2| - 8.9 6.2 40.9 0.24 11.3 27.8 2.7 1 1 1 2 2 1 0 Spc19 Wtap PF17098.5 gi|33356674|ref|NP_125950.2| - 8.9 6.2 37.8 7.4 6.5 8.6 2.6 1 1 1 2 2 2 0 WTAP/Mum2p family Uso1_p115_C PF04871.13 gi|33356674|ref|NP_125950.2| - 9.7 6.6 51.3 2.4 8.6 17.9 3.3 1 1 2 3 3 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region ATPase PF06745.13 gi|14520476|ref|NP_125951.1| - 3.1e-93 311.4 0.0 3.5e-93 311.2 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|14520476|ref|NP_125951.1| - 5.6e-09 35.9 0.0 1.1e-08 34.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|14520476|ref|NP_125951.1| - 1.3e-07 30.6 0.0 1.9e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein Rad51 PF08423.11 gi|14520476|ref|NP_125951.1| - 0.00069 19.0 0.3 0.0057 16.0 0.1 2.0 2 0 0 2 2 2 1 Rad51 T2SSE PF00437.20 gi|14520476|ref|NP_125951.1| - 0.01 14.9 0.0 0.018 14.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein DnaB_C PF03796.15 gi|14520476|ref|NP_125951.1| - 0.017 14.4 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_19 PF13245.6 gi|14520476|ref|NP_125951.1| - 0.026 14.9 0.9 0.057 13.7 0.7 1.9 1 1 0 1 1 1 0 AAA domain Complex1_49kDa PF00346.19 gi|14520476|ref|NP_125951.1| - 0.038 13.1 0.0 0.056 12.5 0.0 1.1 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AAA_24 PF13479.6 gi|14520476|ref|NP_125951.1| - 0.049 13.3 0.4 0.29 10.8 0.5 2.1 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|14520476|ref|NP_125951.1| - 0.055 13.9 0.0 0.098 13.0 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain MEDS PF14417.6 gi|14520476|ref|NP_125951.1| - 0.093 12.6 0.0 0.17 11.7 0.0 1.4 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF2075 PF09848.9 gi|14520476|ref|NP_125951.1| - 0.17 11.1 0.4 0.38 9.9 0.2 1.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|14520476|ref|NP_125951.1| - 0.17 11.4 0.0 0.32 10.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PPV_E1_C PF00519.17 gi|14520476|ref|NP_125951.1| - 0.2 10.4 0.0 0.43 9.4 0.0 1.4 2 0 0 2 2 2 0 Papillomavirus helicase DUF116 PF01976.17 gi|14520477|ref|NP_125952.1| - 8.3e-42 142.3 0.3 9.5e-42 142.1 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF116 Methyltransf_25 PF13649.6 gi|14520478|ref|NP_125953.1| - 3.5e-10 40.4 0.2 6.1e-10 39.7 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14520478|ref|NP_125953.1| - 1.4e-05 24.6 0.3 2.5e-05 23.8 0.3 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|14520478|ref|NP_125953.1| - 0.00011 22.0 0.0 0.00013 21.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14520478|ref|NP_125953.1| - 0.0003 20.7 0.1 0.00054 19.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF938 PF06080.12 gi|14520478|ref|NP_125953.1| - 0.00032 20.5 0.0 0.00045 20.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF938) MTS PF05175.14 gi|14520478|ref|NP_125953.1| - 0.00036 20.1 0.2 0.00067 19.2 0.1 1.4 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|14520478|ref|NP_125953.1| - 0.0011 18.7 0.1 0.0016 18.2 0.1 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 gi|14520478|ref|NP_125953.1| - 0.0016 18.1 0.0 0.0025 17.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.15 gi|14520478|ref|NP_125953.1| - 0.0029 16.9 0.0 0.0047 16.3 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_23 PF13489.6 gi|14520478|ref|NP_125953.1| - 0.009 15.9 0.0 0.016 15.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|14520478|ref|NP_125953.1| - 0.0091 15.2 0.1 0.014 14.6 0.1 1.2 1 0 0 1 1 1 1 O-methyltransferase PCMT PF01135.19 gi|14520478|ref|NP_125953.1| - 0.016 14.9 0.0 0.034 13.9 0.0 1.5 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_15 PF09445.10 gi|14520478|ref|NP_125953.1| - 0.027 14.0 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|14520478|ref|NP_125953.1| - 0.063 12.3 0.0 0.096 11.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Peptidase_M24 PF00557.24 gi|14520479|ref|NP_125954.1| - 1.1e-30 107.0 0.1 1.6e-30 106.4 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|14520479|ref|NP_125954.1| - 2.1e-15 57.5 0.0 2.3e-14 54.2 0.0 2.2 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain AHSP PF09236.10 gi|14520479|ref|NP_125954.1| - 0.0073 16.7 0.0 0.2 12.1 0.0 2.5 2 0 0 2 2 2 1 Alpha-haemoglobin stabilising protein adh_short_C2 PF13561.6 gi|14520480|ref|NP_125955.1| - 1.1e-51 175.6 0.0 1.6e-51 175.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|14520480|ref|NP_125955.1| - 4.2e-38 130.8 0.0 5.1e-38 130.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|14520480|ref|NP_125955.1| - 2.2e-08 34.2 0.0 3.8e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 gi|14520480|ref|NP_125955.1| - 5.4e-07 29.7 0.0 7.5e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding 3HCDH_N PF02737.18 gi|14520480|ref|NP_125955.1| - 0.00041 20.3 0.3 0.00072 19.5 0.0 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_11 PF08241.12 gi|14520480|ref|NP_125955.1| - 0.00073 20.1 0.0 0.0072 17.0 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14520480|ref|NP_125955.1| - 0.0013 19.4 0.0 0.014 16.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain DUF1776 PF08643.10 gi|14520480|ref|NP_125955.1| - 0.0024 17.3 0.0 0.004 16.6 0.0 1.3 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Ubie_methyltran PF01209.18 gi|14520480|ref|NP_125955.1| - 0.004 16.5 0.1 0.041 13.2 0.1 2.0 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family ADH_zinc_N PF00107.26 gi|14520480|ref|NP_125955.1| - 0.011 15.7 0.0 0.021 14.8 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding dehydrogenase TrkA_N PF02254.18 gi|14520480|ref|NP_125955.1| - 0.025 14.8 0.1 0.053 13.8 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|14520480|ref|NP_125955.1| - 0.031 13.9 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NmrA PF05368.13 gi|14520480|ref|NP_125955.1| - 0.031 13.8 0.0 0.8 9.2 0.0 2.1 2 0 0 2 2 2 0 NmrA-like family DUF2000 PF09391.10 gi|14520480|ref|NP_125955.1| - 0.043 13.7 0.2 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2000) Epimerase PF01370.21 gi|14520480|ref|NP_125955.1| - 0.056 12.9 0.0 0.2 11.1 0.0 1.7 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family B12-binding PF02310.19 gi|14520480|ref|NP_125955.1| - 0.068 13.2 0.0 0.16 12.0 0.0 1.5 2 0 0 2 2 2 0 B12 binding domain Glyco_tran_WecB PF03808.13 gi|14520480|ref|NP_125955.1| - 0.084 12.8 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family Polysacc_synt_2 PF02719.15 gi|14520480|ref|NP_125955.1| - 0.11 11.6 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_Gly3P_dh_N PF01210.23 gi|14520480|ref|NP_125955.1| - 0.13 12.3 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Glyco_transf_5 PF08323.11 gi|14520480|ref|NP_125955.1| - 0.19 11.4 0.0 19 4.8 0.0 2.1 2 0 0 2 2 2 0 Starch synthase catalytic domain Hydrolase_4 PF12146.8 gi|14520481|ref|NP_125956.1| - 2.9e-16 59.5 0.0 6.1e-11 42.0 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|14520481|ref|NP_125956.1| - 2.1e-15 57.1 0.0 8e-13 48.6 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 gi|14520481|ref|NP_125956.1| - 4e-12 46.3 0.0 2e-08 34.2 0.0 2.1 2 0 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 gi|14520481|ref|NP_125956.1| - 6.1e-12 46.6 0.0 4.6e-11 43.8 0.0 1.8 1 1 1 2 2 2 1 Alpha/beta hydrolase family DLH PF01738.18 gi|14520481|ref|NP_125956.1| - 2.7e-08 33.6 0.1 0.0046 16.5 0.0 2.5 2 1 0 2 2 2 2 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|14520481|ref|NP_125956.1| - 5.5e-07 29.3 0.0 1.1e-06 28.4 0.0 1.5 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 gi|14520481|ref|NP_125956.1| - 8.5e-05 22.5 0.1 0.0068 16.2 0.1 2.8 2 1 0 3 3 3 1 Phospholipase/Carboxylesterase PAF-AH_p_II PF03403.13 gi|14520481|ref|NP_125956.1| - 0.00048 18.8 0.0 0.001 17.7 0.0 1.5 1 0 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II FSH1 PF03959.13 gi|14520481|ref|NP_125956.1| - 0.0013 18.5 0.0 0.02 14.5 0.0 2.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Fer4_12 PF13353.6 gi|14520481|ref|NP_125956.1| - 0.022 15.0 0.0 0.039 14.2 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain BAAT_C PF08840.11 gi|14520481|ref|NP_125956.1| - 0.072 13.0 0.0 0.34 10.8 0.0 1.9 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF900 PF05990.12 gi|14520481|ref|NP_125956.1| - 0.093 12.2 0.1 0.17 11.3 0.1 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Fer4_14 PF13394.6 gi|14520481|ref|NP_125956.1| - 0.11 12.6 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF676 PF05057.14 gi|14520481|ref|NP_125956.1| - 0.15 11.5 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) FixH PF05751.11 gi|14520481|ref|NP_125956.1| - 3.6 7.6 6.0 16 5.5 6.1 2.0 2 0 0 2 2 2 0 FixH MFS_1 PF07690.16 gi|14520482|ref|NP_125957.1| - 4.3e-23 81.8 40.4 2.9e-12 46.2 13.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|14520482|ref|NP_125957.1| - 4.8e-14 51.8 17.8 4.8e-14 51.8 17.8 1.3 1 1 0 1 1 1 1 MFS/sugar transport protein Sugar_tr PF00083.24 gi|14520482|ref|NP_125957.1| - 7.5e-07 28.4 18.4 1.9e-05 23.7 9.4 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter BT1 PF03092.16 gi|14520482|ref|NP_125957.1| - 0.016 13.4 5.8 0.17 10.1 0.7 2.3 2 0 0 2 2 2 0 BT1 family TraG_N PF07916.11 gi|14520482|ref|NP_125957.1| - 0.068 12.0 3.9 0.17 10.7 3.9 1.6 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF2663 PF10864.8 gi|14520482|ref|NP_125957.1| - 2.2 8.7 5.1 2.2 8.7 1.7 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2663) MFS_1 PF07690.16 gi|14520483|ref|NP_125958.1| - 2.2e-50 171.6 40.1 1.6e-32 112.8 15.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|14520483|ref|NP_125958.1| - 2e-25 89.2 30.8 5.4e-25 87.8 30.9 1.7 1 1 0 1 1 1 1 MFS/sugar transport protein LacY_symp PF01306.19 gi|14520483|ref|NP_125958.1| - 1.8e-08 33.6 9.1 1.8e-08 33.6 9.1 3.3 2 1 0 3 3 3 2 LacY proton/sugar symporter PUCC PF03209.15 gi|14520483|ref|NP_125958.1| - 5.3e-05 22.4 14.2 0.00016 20.8 14.2 1.8 1 1 0 1 1 1 1 PUCC protein Sugar_tr PF00083.24 gi|14520483|ref|NP_125958.1| - 0.00056 18.9 7.1 0.00056 18.9 7.1 2.5 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|14520483|ref|NP_125958.1| - 2.2 6.6 12.2 0.04 12.3 4.8 1.7 2 0 0 2 2 2 0 Transmembrane secretion effector GDPD PF03009.17 gi|14520484|ref|NP_125959.1| - 4.5e-37 128.2 0.0 1.2e-34 120.2 0.0 2.1 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family PI-PLC-X PF00388.19 gi|14520484|ref|NP_125959.1| - 0.0014 18.2 0.1 0.0032 17.1 0.0 1.6 2 0 0 2 2 2 1 Phosphatidylinositol-specific phospholipase C, X domain TusA PF01206.17 gi|14520484|ref|NP_125959.1| - 0.032 14.0 0.6 1.4 8.8 0.0 3.1 4 0 0 4 4 4 0 Sulfurtransferase TusA ATPgrasp_N PF18130.1 gi|14520484|ref|NP_125959.1| - 0.039 14.5 0.0 5 7.8 0.0 2.4 2 0 0 2 2 2 0 ATP-grasp N-terminal domain Peptidase_M13_N PF05649.13 gi|14520484|ref|NP_125959.1| - 0.05 13.3 0.0 0.098 12.3 0.0 1.5 2 0 0 2 2 2 0 Peptidase family M13 QRPTase_C PF01729.19 gi|14520484|ref|NP_125959.1| - 0.16 11.7 2.0 0.85 9.4 0.1 2.1 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain FGGY_N PF00370.21 gi|14520485|ref|NP_125960.1| - 9.3e-88 293.9 0.0 1.3e-87 293.4 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|14520485|ref|NP_125960.1| - 1.3e-55 188.2 0.1 4.5e-55 186.4 0.1 1.8 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 gi|14520485|ref|NP_125960.1| - 0.046 13.2 0.0 0.3 10.6 0.0 2.1 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family CreD PF06123.12 gi|14520486|ref|NP_125961.1| - 0.12 11.2 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD DAO PF01266.24 gi|14520487|ref|NP_125962.1| - 2.9e-68 231.0 0.1 3.4e-68 230.8 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer2_BFD PF04324.15 gi|14520487|ref|NP_125962.1| - 8.4e-16 58.1 1.1 2.2e-15 56.7 1.1 1.8 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain NAD_binding_8 PF13450.6 gi|14520487|ref|NP_125962.1| - 2.1e-08 34.3 0.0 1.2e-07 31.8 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|14520487|ref|NP_125962.1| - 8.5e-08 31.8 0.3 0.002 17.4 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14520487|ref|NP_125962.1| - 1.3e-05 25.6 1.1 0.0093 16.5 0.1 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|14520487|ref|NP_125962.1| - 0.00034 19.4 0.2 0.61 8.7 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein TrkA_N PF02254.18 gi|14520487|ref|NP_125962.1| - 0.0013 18.9 0.0 0.0037 17.5 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain Thi4 PF01946.17 gi|14520487|ref|NP_125962.1| - 0.0018 17.5 0.9 0.0058 15.9 0.1 2.1 3 0 0 3 3 3 1 Thi4 family Trp_halogenase PF04820.14 gi|14520487|ref|NP_125962.1| - 0.0019 17.2 2.0 0.55 9.0 0.1 2.3 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|14520487|ref|NP_125962.1| - 0.0026 17.7 0.8 0.017 15.1 0.1 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding 3HCDH_N PF02737.18 gi|14520487|ref|NP_125962.1| - 0.0037 17.2 0.1 0.0063 16.4 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.19 gi|14520487|ref|NP_125962.1| - 0.0049 16.2 0.0 0.009 15.3 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|14520487|ref|NP_125962.1| - 0.04 13.2 0.7 1.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|14520487|ref|NP_125962.1| - 0.054 12.5 2.1 0.12 11.4 0.0 2.3 3 0 0 3 3 3 0 Lycopene cyclase protein FAD_binding_2 PF00890.24 gi|14520487|ref|NP_125962.1| - 0.32 10.0 0.6 2.7 7.0 0.6 2.0 1 1 0 1 1 1 0 FAD binding domain Pyr_redox_2 PF07992.14 gi|14520488|ref|NP_125963.1| - 7.4e-32 110.7 1.1 1e-31 110.3 1.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|14520488|ref|NP_125963.1| - 1.1e-13 51.2 0.9 6.4e-07 28.9 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|14520488|ref|NP_125963.1| - 3.9e-13 49.6 0.1 1.5e-11 44.3 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|14520488|ref|NP_125963.1| - 1e-10 42.0 3.5 0.00055 20.4 0.2 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|14520488|ref|NP_125963.1| - 1.4e-10 40.9 8.2 2.3e-07 30.3 1.5 4.2 3 1 1 4 4 4 2 FAD binding domain NAD_binding_8 PF13450.6 gi|14520488|ref|NP_125963.1| - 8.2e-10 38.8 0.1 5.5e-06 26.5 0.0 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|14520488|ref|NP_125963.1| - 1.5e-08 33.8 5.0 1.8e-07 30.2 0.5 3.1 3 0 0 3 3 3 1 HI0933-like protein GIDA PF01134.22 gi|14520488|ref|NP_125963.1| - 1.6e-06 27.4 0.9 1.4e-05 24.4 0.3 2.6 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|14520488|ref|NP_125963.1| - 2e-05 24.0 4.3 0.0016 17.8 0.1 2.6 3 0 0 3 3 3 2 FAD binding domain Lycopene_cycl PF05834.12 gi|14520488|ref|NP_125963.1| - 0.00011 21.4 5.6 0.0038 16.3 0.9 3.1 3 0 0 3 3 3 1 Lycopene cyclase protein NAD_binding_7 PF13241.6 gi|14520488|ref|NP_125963.1| - 0.00036 20.9 0.6 0.054 13.9 0.1 2.8 2 1 0 2 2 2 1 Putative NAD(P)-binding DAO PF01266.24 gi|14520488|ref|NP_125963.1| - 0.00064 19.4 12.8 0.0036 16.9 1.3 3.9 2 2 0 4 4 4 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|14520488|ref|NP_125963.1| - 0.00088 18.6 2.8 0.094 11.9 0.3 2.8 3 0 0 3 3 3 2 Thi4 family AlaDh_PNT_C PF01262.21 gi|14520488|ref|NP_125963.1| - 0.0029 16.9 0.5 0.0029 16.9 0.5 2.2 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|14520488|ref|NP_125963.1| - 0.023 14.3 0.9 4.2 6.9 0.1 2.4 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|14520488|ref|NP_125963.1| - 0.14 11.5 1.3 8.4 5.7 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|14520488|ref|NP_125963.1| - 0.26 11.2 3.6 6.9 6.5 0.4 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1667 PF07892.11 gi|14520489|ref|NP_125964.1| - 3.1e-27 94.4 1.1 3.1e-27 94.4 1.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1667) Molybdop_Fe4S4 PF04879.16 gi|14520489|ref|NP_125964.1| - 0.0016 18.4 2.9 0.0047 16.9 2.9 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Ribosomal_L37ae PF01780.19 gi|14520490|ref|NP_125965.1| - 1.8e-33 114.5 3.5 1.9e-33 114.4 3.5 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|14520490|ref|NP_125965.1| - 1.8e-07 31.0 2.4 2.6e-07 30.5 2.4 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|14520490|ref|NP_125965.1| - 0.00049 20.1 1.2 0.059 13.5 0.4 2.2 2 0 0 2 2 2 1 Zinc ribbon domain zf-RRN7 PF11781.8 gi|14520490|ref|NP_125965.1| - 0.00056 19.5 0.7 0.00079 19.1 0.7 1.3 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 OrfB_Zn_ribbon PF07282.11 gi|14520490|ref|NP_125965.1| - 0.0011 18.8 0.6 0.0015 18.4 0.6 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.12 gi|14520490|ref|NP_125965.1| - 0.0026 17.2 0.1 0.0038 16.7 0.1 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding Lar_restr_allev PF14354.6 gi|14520490|ref|NP_125965.1| - 0.0041 17.4 0.3 0.0063 16.9 0.3 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar ADK_lid PF05191.14 gi|14520490|ref|NP_125965.1| - 0.0073 16.3 0.4 1.5 8.9 0.0 2.2 2 0 0 2 2 2 1 Adenylate kinase, active site lid C1_1 PF00130.22 gi|14520490|ref|NP_125965.1| - 0.014 15.3 0.8 0.019 14.9 0.8 1.1 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_13 PF17977.1 gi|14520490|ref|NP_125965.1| - 0.029 14.5 2.2 0.038 14.1 2.2 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_ribbon_SprT PF17283.2 gi|14520490|ref|NP_125965.1| - 0.042 13.7 2.7 0.089 12.7 2.7 1.5 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Nudix_N_2 PF14803.6 gi|14520490|ref|NP_125965.1| - 0.052 13.5 3.1 0.68 9.9 0.2 2.5 2 0 0 2 2 2 0 Nudix N-terminal A2L_zn_ribbon PF08792.10 gi|14520490|ref|NP_125965.1| - 0.053 13.3 2.0 0.32 10.8 2.0 1.9 1 1 0 1 1 1 0 A2L zinc ribbon domain zf-BED PF02892.15 gi|14520490|ref|NP_125965.1| - 0.055 13.5 2.5 0.7 10.0 0.2 2.1 1 1 1 2 2 2 0 BED zinc finger Rep_fac-A_C PF08646.10 gi|14520490|ref|NP_125965.1| - 0.069 12.9 0.2 0.079 12.7 0.2 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain HalOD2 PF18547.1 gi|14520490|ref|NP_125965.1| - 0.074 13.0 2.6 0.17 11.8 2.6 1.6 1 1 0 1 1 1 0 Halobacterial output domain 2 RPA_interact_C PF14768.6 gi|14520490|ref|NP_125965.1| - 0.076 13.6 0.2 0.1 13.1 0.2 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal zf-H2C2_2 PF13465.6 gi|14520490|ref|NP_125965.1| - 0.079 13.4 0.1 9.5 6.9 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_3 PF13878.6 gi|14520490|ref|NP_125965.1| - 0.081 12.8 0.4 5.5 6.9 0.0 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DNA_ligase_ZBD PF03119.16 gi|14520490|ref|NP_125965.1| - 0.084 12.9 2.4 0.16 12.0 2.4 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C2H2 PF00096.26 gi|14520490|ref|NP_125965.1| - 0.088 13.3 0.6 8.5 7.0 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|14520490|ref|NP_125965.1| - 0.11 13.4 0.7 21 6.3 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger DUF35_N PF12172.8 gi|14520490|ref|NP_125965.1| - 0.14 12.0 2.9 3.7 7.5 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NMT PF01233.19 gi|14520490|ref|NP_125965.1| - 0.15 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain zf-RanBP PF00641.18 gi|14520490|ref|NP_125965.1| - 0.26 10.7 3.4 0.37 10.1 0.7 2.0 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-ACC PF17848.1 gi|14520490|ref|NP_125965.1| - 0.5 10.5 6.2 7.4 6.7 1.3 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Prim_Zn_Ribbon PF08273.12 gi|14520490|ref|NP_125965.1| - 0.78 10.1 7.3 2.7 8.4 7.3 1.8 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-tcix PF14952.6 gi|14520490|ref|NP_125965.1| - 1.2 8.8 6.6 0.41 10.3 0.7 2.3 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Rubredoxin_2 PF18073.1 gi|14520490|ref|NP_125965.1| - 3.2 7.5 6.8 41 4.0 6.8 2.1 1 1 0 1 1 1 0 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 gi|14520491|ref|NP_125966.1| - 3e-09 36.4 5.6 4.3e-09 35.9 5.6 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|14520491|ref|NP_125966.1| - 9.6e-05 22.4 0.2 0.00014 21.9 0.2 1.2 1 0 0 1 1 1 1 Zinc ribbon domain Zn_ribbon_SprT PF17283.2 gi|14520491|ref|NP_125966.1| - 0.00013 21.8 3.2 0.00013 21.8 3.2 1.5 1 1 1 2 2 2 1 SprT-like zinc ribbon domain HypA PF01155.19 gi|14520491|ref|NP_125966.1| - 0.00019 21.5 0.2 0.00021 21.3 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|14520491|ref|NP_125966.1| - 0.00069 19.3 3.8 0.0095 15.6 3.8 2.0 1 1 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|14520491|ref|NP_125966.1| - 0.0007 18.9 0.9 0.044 13.2 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain Desulfoferrod_N PF06397.12 gi|14520491|ref|NP_125966.1| - 0.0017 18.0 0.9 0.02 14.5 0.2 2.0 2 0 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain DUF951 PF06107.11 gi|14520491|ref|NP_125966.1| - 0.0026 17.6 0.5 0.24 11.3 0.0 2.0 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF951) Cys_rich_CPXG PF14255.6 gi|14520491|ref|NP_125966.1| - 0.0031 17.4 0.6 0.81 9.6 0.1 2.1 2 0 0 2 2 2 1 Cysteine-rich CPXCG DZR PF12773.7 gi|14520491|ref|NP_125966.1| - 0.0044 17.0 0.8 0.023 14.7 1.0 1.6 1 1 0 1 1 1 1 Double zinc ribbon Sgf11 PF08209.11 gi|14520491|ref|NP_125966.1| - 0.0048 16.4 1.9 0.28 10.8 0.2 2.1 2 0 0 2 2 2 1 Sgf11 (transcriptional regulation protein) zf_UBZ PF18439.1 gi|14520491|ref|NP_125966.1| - 0.0077 15.8 0.6 0.52 9.9 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger TF_Zn_Ribbon PF08271.12 gi|14520491|ref|NP_125966.1| - 0.0084 15.6 2.8 0.69 9.5 0.3 2.1 1 1 0 2 2 2 1 TFIIB zinc-binding DUF35_N PF12172.8 gi|14520491|ref|NP_125966.1| - 0.009 15.9 1.6 2.1 8.3 0.1 2.2 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_9 PF14369.6 gi|14520491|ref|NP_125966.1| - 0.0093 16.2 0.4 0.016 15.4 0.4 1.4 1 0 0 1 1 1 1 zinc-ribbon PyrI_C PF02748.15 gi|14520491|ref|NP_125966.1| - 0.014 15.3 1.0 0.63 10.0 0.1 2.1 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF3268 PF11672.8 gi|14520491|ref|NP_125966.1| - 0.015 15.6 1.3 0.66 10.3 0.1 2.0 1 1 1 2 2 2 0 zinc-finger-containing domain Zn_Tnp_IS91 PF14319.6 gi|14520491|ref|NP_125966.1| - 0.017 15.1 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zinc_ribbon_10 PF10058.9 gi|14520491|ref|NP_125966.1| - 0.017 14.8 0.7 2 8.2 0.1 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_Tnp_IS1595 PF12760.7 gi|14520491|ref|NP_125966.1| - 0.021 14.8 3.9 0.39 10.7 0.2 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|14520491|ref|NP_125966.1| - 0.026 14.4 0.5 0.034 14.0 0.5 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_5 PF13719.6 gi|14520491|ref|NP_125966.1| - 0.029 14.1 2.0 3.5 7.5 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Ogr_Delta PF04606.12 gi|14520491|ref|NP_125966.1| - 0.03 14.3 0.4 1.3 9.1 0.1 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger NOB1_Zn_bind PF08772.11 gi|14520491|ref|NP_125966.1| - 0.033 14.3 0.1 0.04 14.1 0.1 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zinc-ribbons_6 PF07191.12 gi|14520491|ref|NP_125966.1| - 0.034 14.1 0.2 0.046 13.7 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-C2HC5 PF06221.13 gi|14520491|ref|NP_125966.1| - 0.035 14.1 0.3 0.052 13.5 0.3 1.4 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zf-H2C2_2 PF13465.6 gi|14520491|ref|NP_125966.1| - 0.048 14.1 0.5 8 7.1 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain DNA_ligase_ZBD PF03119.16 gi|14520491|ref|NP_125966.1| - 0.055 13.5 5.2 0.56 10.3 0.1 2.6 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain TFIIS_C PF01096.18 gi|14520491|ref|NP_125966.1| - 0.057 13.3 1.4 4.7 7.2 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) CpXC PF14353.6 gi|14520491|ref|NP_125966.1| - 0.072 13.1 1.1 5.6 7.0 0.1 2.0 1 1 1 2 2 2 0 CpXC protein zf-NADH-PPase PF09297.11 gi|14520491|ref|NP_125966.1| - 0.098 12.3 2.5 0.58 9.9 2.5 1.9 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain RNHCP PF12647.7 gi|14520491|ref|NP_125966.1| - 0.1 12.6 0.6 0.13 12.2 0.6 1.3 1 1 0 1 1 1 0 RNHCP domain zf-ISL3 PF14690.6 gi|14520491|ref|NP_125966.1| - 0.13 13.0 6.1 0.22 12.2 1.0 2.1 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-C2H2 PF00096.26 gi|14520491|ref|NP_125966.1| - 0.2 12.2 3.0 12 6.6 0.3 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_ribbon_recom PF13408.6 gi|14520491|ref|NP_125966.1| - 0.26 11.8 5.5 1.6 9.3 0.5 2.1 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2HC_2 PF13913.6 gi|14520491|ref|NP_125966.1| - 0.28 11.1 4.8 3.4 7.7 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type NRDD PF13597.6 gi|14520491|ref|NP_125966.1| - 0.29 9.9 0.3 0.3 9.8 0.3 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zinc_ribbon_4 PF13717.6 gi|14520491|ref|NP_125966.1| - 0.43 10.6 3.8 17 5.4 3.8 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|14520491|ref|NP_125966.1| - 0.69 9.7 5.5 1.6 8.5 0.4 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain Pcc1 PF09341.10 gi|14520493|ref|NP_125968.1| - 1.5e-11 44.3 0.0 1.6e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF1330 PF07045.11 gi|14520493|ref|NP_125968.1| - 0.1 12.9 0.1 0.17 12.2 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1330) GTP_EFTU PF00009.27 gi|14520494|ref|NP_125969.1| - 6.8e-65 218.3 0.2 1e-64 217.7 0.2 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|14520494|ref|NP_125969.1| - 7.3e-27 93.5 0.1 5.6e-26 90.7 0.0 2.6 1 1 1 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|14520494|ref|NP_125969.1| - 6e-26 90.3 0.1 1.2e-25 89.4 0.1 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|14520494|ref|NP_125969.1| - 3.5e-24 84.7 0.1 3.5e-24 84.7 0.1 2.3 3 0 0 3 3 2 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|14520494|ref|NP_125969.1| - 3.8e-16 59.2 0.5 8.8e-16 58.1 0.5 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|14520494|ref|NP_125969.1| - 0.00052 20.1 0.1 0.0014 18.7 0.1 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|14520494|ref|NP_125969.1| - 0.0015 18.4 0.0 0.0037 17.1 0.0 1.6 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain SRPRB PF09439.10 gi|14520494|ref|NP_125969.1| - 0.091 12.2 0.0 0.26 10.7 0.0 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF2283 PF10049.9 gi|14520494|ref|NP_125969.1| - 0.097 12.9 0.0 0.41 10.9 0.0 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) Ras PF00071.22 gi|14520494|ref|NP_125969.1| - 0.1 12.2 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Ras family Glyco_trans_1_2 PF13524.6 gi|14520494|ref|NP_125969.1| - 0.13 12.7 0.1 0.67 10.4 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferases group 1 RL10P_insert PF17777.1 gi|14520494|ref|NP_125969.1| - 0.14 12.2 1.0 9.6 6.3 0.0 4.1 6 0 0 6 6 6 0 Insertion domain in 60S ribosomal protein L10P DUF63 PF01889.17 gi|14520495|ref|NP_125970.1| - 1.8e-87 294.0 16.5 2e-87 293.8 16.5 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 TMEM40 PF15817.5 gi|14520495|ref|NP_125970.1| - 0.043 13.6 5.5 0.33 10.7 3.3 2.5 2 0 0 2 2 2 0 Transmembrane protein 40 family DUF1751 PF08551.10 gi|14520495|ref|NP_125970.1| - 0.75 10.4 9.5 0.68 10.5 1.5 3.1 3 1 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) Inositol_P PF00459.25 gi|14520496|ref|NP_125971.1| - 1.2e-35 123.3 0.0 2.1e-35 122.6 0.0 1.4 1 1 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|14520496|ref|NP_125971.1| - 4.1e-05 23.1 0.0 6.3e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain ERCC4 PF02732.15 gi|14520497|ref|NP_125972.1| - 1.2e-31 110.0 0.5 4.4e-31 108.2 0.0 2.1 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.31 gi|14520497|ref|NP_125972.1| - 2.3e-26 92.3 0.1 1.2e-23 83.5 0.0 2.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|14520497|ref|NP_125972.1| - 2.9e-25 89.1 0.4 2.8e-22 79.3 0.0 3.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|14520497|ref|NP_125972.1| - 3.7e-22 79.1 2.0 1.6e-20 73.8 0.0 3.1 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|14520497|ref|NP_125972.1| - 5.9e-11 42.3 0.0 2.3e-10 40.4 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|14520497|ref|NP_125972.1| - 2.8e-07 31.0 0.3 1.3e-06 28.9 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|14520497|ref|NP_125972.1| - 3.3e-07 29.8 0.0 9.7e-07 28.4 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif SWI2_SNF2 PF18766.1 gi|14520497|ref|NP_125972.1| - 1.8e-05 24.6 0.4 8.2e-05 22.4 0.0 2.2 3 0 0 3 3 3 1 SWI2/SNF2 ATPase HHH_3 PF12836.7 gi|14520497|ref|NP_125972.1| - 0.0023 18.2 0.1 0.019 15.2 0.0 2.5 3 0 0 3 3 2 1 Helix-hairpin-helix motif UBA_3 PF09288.10 gi|14520497|ref|NP_125972.1| - 0.022 14.6 0.8 2 8.3 0.0 3.6 3 1 0 3 3 3 0 Fungal ubiquitin-associated domain Helicase_C_2 PF13307.6 gi|14520497|ref|NP_125972.1| - 0.032 14.4 0.2 0.16 12.2 0.1 2.3 2 0 0 2 2 2 0 Helicase C-terminal domain TusA PF01206.17 gi|14520497|ref|NP_125972.1| - 0.049 13.5 0.9 7.7 6.4 0.0 3.5 3 0 0 3 3 3 0 Sulfurtransferase TusA DUF257 PF03192.13 gi|14520498|ref|NP_125973.1| - 6.1e-47 160.1 4.4 6.9e-47 159.9 4.4 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 Methyltransf_8 PF05148.15 gi|14520498|ref|NP_125973.1| - 0.092 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase Sigma_reg_N PF13800.6 gi|14520499|ref|NP_125974.1| - 0.024 14.9 0.3 0.041 14.2 0.3 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal APG6_N PF17675.1 gi|33356676|ref|NP_125975.2| - 3.1e-05 24.5 5.0 4.2e-05 24.1 5.0 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region UPF0242 PF06785.11 gi|33356676|ref|NP_125975.2| - 0.00014 22.0 2.9 0.00018 21.7 2.9 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Baculo_PEP_C PF04513.12 gi|33356676|ref|NP_125975.2| - 0.00036 20.6 0.1 0.00062 19.8 0.1 1.4 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus DHR10 PF18595.1 gi|33356676|ref|NP_125975.2| - 0.002 18.2 15.0 0.003 17.6 15.0 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DUF724 PF05266.14 gi|33356676|ref|NP_125975.2| - 0.0027 17.6 6.1 0.0042 16.9 6.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF724) DUF3450 PF11932.8 gi|33356676|ref|NP_125975.2| - 0.0047 16.3 6.7 0.0098 15.2 6.7 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3450) BRE1 PF08647.11 gi|33356676|ref|NP_125975.2| - 0.005 16.9 7.6 0.0096 16.0 7.6 1.5 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase GAS PF13851.6 gi|33356676|ref|NP_125975.2| - 0.006 16.0 13.0 0.0087 15.4 13.0 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.9 gi|33356676|ref|NP_125975.2| - 0.006 16.6 16.8 0.028 14.4 15.8 2.0 1 1 1 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CALCOCO1 PF07888.11 gi|33356676|ref|NP_125975.2| - 0.0096 14.8 11.4 0.012 14.5 11.4 1.0 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like AAA_13 PF13166.6 gi|33356676|ref|NP_125975.2| - 0.012 14.2 6.0 0.017 13.8 6.0 1.1 1 0 0 1 1 1 0 AAA domain Pil1 PF13805.6 gi|33356676|ref|NP_125975.2| - 0.015 14.8 11.1 0.02 14.4 11.1 1.1 1 0 0 1 1 1 0 Eisosome component PIL1 Sec34 PF04136.15 gi|33356676|ref|NP_125975.2| - 0.019 14.8 4.5 0.034 14.0 4.5 1.4 1 1 0 1 1 1 0 Sec34-like family Spc7 PF08317.11 gi|33356676|ref|NP_125975.2| - 0.021 13.7 11.9 0.028 13.3 11.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein CRA PF06589.11 gi|33356676|ref|NP_125975.2| - 0.023 14.8 1.2 0.04 14.0 1.2 1.5 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Phage_GP20 PF06810.11 gi|33356676|ref|NP_125975.2| - 0.034 14.0 10.2 0.12 12.2 10.2 1.8 1 1 0 1 1 1 0 Phage minor structural protein GP20 PCRF PF03462.18 gi|33356676|ref|NP_125975.2| - 0.046 13.6 7.1 0.06 13.2 5.8 1.8 2 0 0 2 2 1 0 PCRF domain Prominin PF05478.11 gi|33356676|ref|NP_125975.2| - 0.046 11.7 1.1 0.068 11.1 1.1 1.2 1 0 0 1 1 1 0 Prominin MAGSP PF03082.14 gi|33356676|ref|NP_125975.2| - 0.05 13.2 0.2 0.094 12.3 0.1 1.5 1 1 0 1 1 1 0 Male accessory gland secretory protein ERM PF00769.19 gi|33356676|ref|NP_125975.2| - 0.052 13.4 12.5 0.076 12.8 12.5 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family V_ATPase_I PF01496.19 gi|33356676|ref|NP_125975.2| - 0.055 11.4 0.4 0.053 11.4 0.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF5082 PF16888.5 gi|33356676|ref|NP_125975.2| - 0.069 13.4 6.6 0.14 12.5 6.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Exonuc_VII_L PF02601.15 gi|33356676|ref|NP_125975.2| - 0.07 12.7 0.2 0.087 12.4 0.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Helo_like_N PF17111.5 gi|33356676|ref|NP_125975.2| - 0.072 12.4 1.7 0.1 12.0 1.7 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins CENP-H PF05837.12 gi|33356676|ref|NP_125975.2| - 0.077 13.4 7.2 0.11 12.9 7.2 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) BLOC1_2 PF10046.9 gi|33356676|ref|NP_125975.2| - 0.082 13.2 9.9 0.071 13.4 4.4 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4355 PF14265.6 gi|33356676|ref|NP_125975.2| - 0.091 13.0 9.1 0.16 12.2 9.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) TcpS PF17456.2 gi|33356676|ref|NP_125975.2| - 0.096 12.7 6.7 0.19 11.8 6.2 1.7 2 0 0 2 2 1 0 Toxin-coregulated pilus protein S DUF1664 PF07889.12 gi|33356676|ref|NP_125975.2| - 0.1 12.6 6.6 0.9 9.6 3.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) LMBR1 PF04791.16 gi|33356676|ref|NP_125975.2| - 0.12 11.2 0.3 0.14 11.1 0.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein HMMR_N PF15905.5 gi|33356676|ref|NP_125975.2| - 0.14 11.6 12.8 0.22 10.9 12.8 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal FlaC_arch PF05377.11 gi|33356676|ref|NP_125975.2| - 0.17 12.3 18.8 0.33 11.4 6.9 3.1 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) DUF4337 PF14235.6 gi|33356676|ref|NP_125975.2| - 0.18 11.9 2.1 0.25 11.5 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Fmp27_WPPW PF10359.9 gi|33356676|ref|NP_125975.2| - 0.19 10.6 4.9 0.25 10.1 4.9 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain MCU PF04678.13 gi|33356676|ref|NP_125975.2| - 0.22 11.6 3.1 0.23 11.5 2.0 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter TMF_DNA_bd PF12329.8 gi|33356676|ref|NP_125975.2| - 0.23 11.5 15.4 0.5 10.4 15.4 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 gi|33356676|ref|NP_125975.2| - 0.26 11.5 0.7 14 6.1 0.2 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) PEP-utilisers_N PF05524.13 gi|33356676|ref|NP_125975.2| - 0.27 11.4 3.2 0.53 10.5 3.1 1.6 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal Vac_Fusion PF02346.16 gi|33356676|ref|NP_125975.2| - 0.3 10.7 7.6 1.4 8.6 5.7 2.6 1 1 1 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 TMPIT PF07851.13 gi|33356676|ref|NP_125975.2| - 0.33 10.2 2.9 0.42 9.8 2.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein GIT_CC PF16559.5 gi|33356676|ref|NP_125975.2| - 0.44 10.5 3.9 0.8 9.6 3.4 1.7 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sigma70_ner PF04546.13 gi|33356676|ref|NP_125975.2| - 0.45 10.4 9.8 0.68 9.8 9.6 1.4 1 1 0 1 1 1 0 Sigma-70, non-essential region NPV_P10 PF05531.12 gi|33356676|ref|NP_125975.2| - 0.48 10.9 4.0 3 8.4 0.4 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein PilO PF04350.13 gi|33356676|ref|NP_125975.2| - 0.48 10.6 4.7 0.98 9.6 4.5 1.6 1 1 0 1 1 1 0 Pilus assembly protein, PilO OmpH PF03938.14 gi|33356676|ref|NP_125975.2| - 0.53 10.6 9.2 0.82 10.0 9.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2730 PF10805.8 gi|33356676|ref|NP_125975.2| - 0.57 10.3 7.2 0.86 9.7 5.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) 5_nucleotid PF05761.14 gi|33356676|ref|NP_125975.2| - 0.6 8.9 3.0 0.78 8.6 3.0 1.1 1 0 0 1 1 1 0 5' nucleotidase family Spectrin PF00435.21 gi|33356676|ref|NP_125975.2| - 0.65 10.5 11.1 1.3 9.6 10.2 1.8 1 1 1 2 2 2 0 Spectrin repeat Geminin PF07412.12 gi|33356676|ref|NP_125975.2| - 0.68 9.6 10.2 1.1 9.0 10.2 1.3 1 0 0 1 1 1 0 Geminin CC2-LZ PF16516.5 gi|33356676|ref|NP_125975.2| - 0.73 10.2 12.2 0.54 10.6 6.6 2.3 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Rota_NSP3 PF01665.16 gi|33356676|ref|NP_125975.2| - 0.77 8.8 4.7 1 8.4 4.7 1.2 1 0 0 1 1 1 0 Rotavirus non-structural protein NSP3 ATG16 PF08614.11 gi|33356676|ref|NP_125975.2| - 0.77 10.0 12.7 1.1 9.4 12.7 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) FTA4 PF13093.6 gi|33356676|ref|NP_125975.2| - 0.78 9.6 8.0 3 7.7 8.2 1.7 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 KxDL PF10241.9 gi|33356676|ref|NP_125975.2| - 0.81 10.0 5.7 22 5.4 2.5 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF2203 PF09969.9 gi|33356676|ref|NP_125975.2| - 0.85 10.3 7.1 2.6 8.8 7.1 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Rx_N PF18052.1 gi|33356676|ref|NP_125975.2| - 0.86 9.9 10.7 2.4 8.5 0.1 2.7 1 1 1 2 2 2 0 Rx N-terminal domain Lge1 PF11488.8 gi|33356676|ref|NP_125975.2| - 0.89 9.8 9.8 1.2 9.4 8.8 1.8 1 1 0 1 1 1 0 Transcriptional regulatory protein LGE1 DLP_helical PF18709.1 gi|33356676|ref|NP_125975.2| - 0.9 8.7 8.8 3.6 6.7 8.8 1.8 1 1 0 1 1 1 0 Dynamin-like helical domain DivIVA PF05103.13 gi|33356676|ref|NP_125975.2| - 0.91 9.6 9.9 4.1 7.5 9.9 2.1 1 1 0 1 1 1 0 DivIVA protein DUF4795 PF16043.5 gi|33356676|ref|NP_125975.2| - 1 8.9 10.5 4.9 6.7 10.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Laminin_II PF06009.12 gi|33356676|ref|NP_125975.2| - 1.1 9.3 7.0 8.2 6.4 5.6 2.0 1 1 1 2 2 2 0 Laminin Domain II USP8_interact PF08941.10 gi|33356676|ref|NP_125975.2| - 1.3 8.8 5.2 1.2 8.9 0.3 2.1 1 1 1 2 2 2 0 USP8 interacting Casc1_N PF15927.5 gi|33356676|ref|NP_125975.2| - 1.3 8.7 12.1 1.9 8.1 12.1 1.3 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus CENP-Q PF13094.6 gi|33356676|ref|NP_125975.2| - 1.3 9.2 16.6 0.56 10.4 10.8 2.1 1 1 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Dynein_C PF18199.1 gi|33356676|ref|NP_125975.2| - 1.4 8.1 4.1 7.7 5.6 0.0 2.2 1 1 0 2 2 2 0 Dynein heavy chain C-terminal domain Cep57_MT_bd PF06657.13 gi|33356676|ref|NP_125975.2| - 1.4 9.4 13.8 1.3 9.5 1.5 3.2 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Fzo_mitofusin PF04799.13 gi|33356676|ref|NP_125975.2| - 1.8 8.1 7.1 4 7.0 6.9 1.7 1 1 0 1 1 1 0 fzo-like conserved region Spc24 PF08286.11 gi|33356676|ref|NP_125975.2| - 1.8 8.8 10.1 4.8 7.5 10.1 1.8 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF16 PF01519.16 gi|33356676|ref|NP_125975.2| - 2.2 8.8 10.2 10 6.7 7.8 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 Cep57_CLD_2 PF14197.6 gi|33356676|ref|NP_125975.2| - 2.3 8.4 15.0 7.8 6.7 14.9 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 CCDC-167 PF15188.6 gi|33356676|ref|NP_125975.2| - 2.3 8.6 16.6 1.3 9.4 14.5 1.8 2 0 0 2 2 1 0 Coiled-coil domain-containing protein 167 DUF4140 PF13600.6 gi|33356676|ref|NP_125975.2| - 2.6 8.5 7.7 2.1 8.8 3.4 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Csm1_N PF18504.1 gi|33356676|ref|NP_125975.2| - 2.7 8.4 14.0 17 5.9 12.9 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain Atg14 PF10186.9 gi|33356676|ref|NP_125975.2| - 2.8 7.0 6.8 3.5 6.6 6.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DASH_Dad3 PF08656.10 gi|33356676|ref|NP_125975.2| - 3 8.0 8.4 9.6 6.4 8.4 2.0 1 1 0 1 1 1 0 DASH complex subunit Dad3 Prefoldin_2 PF01920.20 gi|33356676|ref|NP_125975.2| - 3 7.8 18.3 0.75 9.8 11.7 2.3 1 1 1 2 2 2 0 Prefoldin subunit Lipoprotein_20 PF13942.6 gi|33356676|ref|NP_125975.2| - 3.1 7.7 10.0 5 7.0 8.5 1.9 1 1 1 2 2 2 0 YfhG lipoprotein DUF4446 PF14584.6 gi|33356676|ref|NP_125975.2| - 3.2 7.7 6.7 2.5 8.1 4.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) PHM7_cyt PF14703.6 gi|33356676|ref|NP_125975.2| - 3.5 7.8 6.1 5.7 7.1 6.1 1.3 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter COG2 PF06148.11 gi|33356676|ref|NP_125975.2| - 4.1 7.5 9.5 25 4.9 8.5 2.2 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Med9 PF07544.13 gi|33356676|ref|NP_125975.2| - 4.9 7.3 10.9 8.5 6.5 0.1 2.9 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Ead_Ea22 PF13935.6 gi|33356676|ref|NP_125975.2| - 5.2 7.7 11.1 11 6.7 11.1 1.4 1 1 0 1 1 1 0 Ead/Ea22-like protein DivIC PF04977.15 gi|33356676|ref|NP_125975.2| - 5.6 6.8 14.4 0.8 9.5 7.9 2.4 1 1 1 2 2 2 0 Septum formation initiator YabA PF06156.13 gi|33356676|ref|NP_125975.2| - 6.6 7.4 9.9 16 6.2 9.8 1.7 1 1 0 1 1 1 0 Initiation control protein YabA AAA_23 PF13476.6 gi|33356676|ref|NP_125975.2| - 8.7 6.8 14.7 79 3.7 14.7 2.0 1 1 0 1 1 1 0 AAA domain zf-C4H2 PF10146.9 gi|33356676|ref|NP_125975.2| - 9.5 6.5 11.7 13 6.0 11.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein tRNA_anti-codon PF01336.25 gi|14520501|ref|NP_125976.1| - 1.4e-08 34.6 1.2 2.5e-08 33.8 1.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain RMI2 PF16100.5 gi|14520501|ref|NP_125976.1| - 0.00084 19.2 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 RPA_C PF08784.11 gi|14520501|ref|NP_125976.1| - 0.015 16.0 0.0 0.034 14.8 0.0 1.5 1 1 0 1 1 1 0 Replication protein A C terminal tRNA_anti-like PF12869.7 gi|14520501|ref|NP_125976.1| - 0.051 13.2 0.1 0.087 12.4 0.1 1.3 1 0 0 1 1 1 0 tRNA_anti-like Acetyltransf_11 PF13720.6 gi|14520501|ref|NP_125976.1| - 0.12 12.8 0.9 3.4 8.2 0.4 2.5 1 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RMI2 PF16100.5 gi|14520502|ref|NP_125977.1| - 3.4e-05 23.7 0.0 4.1e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 tRNA_anti-codon PF01336.25 gi|14520502|ref|NP_125977.1| - 0.0014 18.6 2.9 0.012 15.6 2.0 2.4 1 1 1 2 2 2 1 OB-fold nucleic acid binding domain Rep_fac-A_3 PF08661.11 gi|14520502|ref|NP_125977.1| - 0.016 15.6 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Replication factor A protein 3 Ten1_2 PF15490.6 gi|14520502|ref|NP_125977.1| - 0.036 13.8 0.5 0.071 12.8 0.5 1.6 1 1 0 1 1 1 0 Telomere-capping, CST complex subunit BOF PF04076.13 gi|14520502|ref|NP_125977.1| - 0.16 12.1 1.0 0.38 10.8 1.0 1.6 1 1 0 1 1 1 0 Bacterial OB fold (BOF) protein tRNA_anti-codon PF01336.25 gi|14520503|ref|NP_125978.1| - 5.2e-16 58.4 2.3 1.6e-11 44.0 0.1 3.0 3 1 0 3 3 3 2 OB-fold nucleic acid binding domain Rep_fac-A_C PF08646.10 gi|14520503|ref|NP_125978.1| - 1.4e-11 44.3 0.0 2.2e-11 43.7 0.0 1.4 1 0 0 1 1 1 1 Replication factor-A C terminal domain CDC24_OB3 PF17244.2 gi|14520503|ref|NP_125978.1| - 0.00062 19.5 0.0 0.082 12.6 0.0 2.2 2 0 0 2 2 2 1 Cell division control protein 24, OB domain 3 DUF5521 PF17659.1 gi|14520503|ref|NP_125978.1| - 0.00065 17.7 0.0 0.0011 16.9 0.0 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5521) DUF2240 PF09999.9 gi|14520503|ref|NP_125978.1| - 0.002 17.8 1.8 0.0039 16.8 0.5 2.1 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2240) REPA_OB_2 PF16900.5 gi|14520503|ref|NP_125978.1| - 0.0092 15.9 0.0 0.98 9.4 0.0 2.5 2 0 0 2 2 2 1 Replication protein A OB domain DUF5088 PF17008.5 gi|14520503|ref|NP_125978.1| - 0.012 15.3 0.0 0.029 14.1 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5088) Cation_ATPase_N PF00690.26 gi|14520503|ref|NP_125978.1| - 0.047 13.4 0.6 0.11 12.2 0.2 1.8 2 0 0 2 2 2 0 Cation transporter/ATPase, N-terminus RMI1_C PF16099.5 gi|14520503|ref|NP_125978.1| - 0.065 13.1 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold HTH_12 PF08461.10 gi|14520503|ref|NP_125978.1| - 0.11 12.5 3.0 1.6 8.7 0.5 2.9 3 0 0 3 3 3 0 Ribonuclease R winged-helix domain DUF790 PF05626.11 gi|14520503|ref|NP_125978.1| - 0.16 10.7 2.0 0.12 11.1 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF790) DUF1699 PF08004.11 gi|14520503|ref|NP_125978.1| - 0.21 11.3 2.7 3.2 7.4 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1699) SMC_ScpB PF04079.16 gi|14520504|ref|NP_125979.1| - 7.4e-38 129.7 1.2 3.7e-37 127.4 0.4 1.9 2 0 0 2 2 2 1 Segregation and condensation complex subunit ScpB HTH_5 PF01022.20 gi|14520504|ref|NP_125979.1| - 0.0021 17.9 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|14520504|ref|NP_125979.1| - 0.0044 16.9 0.4 0.059 13.3 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|14520504|ref|NP_125979.1| - 0.0092 16.0 0.1 0.28 11.3 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|14520504|ref|NP_125979.1| - 0.015 15.2 0.2 0.52 10.3 0.1 2.9 2 1 0 2 2 2 0 MarR family HTH_27 PF13463.6 gi|14520504|ref|NP_125979.1| - 0.018 15.5 0.3 0.19 12.2 0.1 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|14520504|ref|NP_125979.1| - 0.022 14.3 0.1 3 7.5 0.1 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Na_H_antiporter PF03553.14 gi|14520505|ref|NP_125980.1| - 5.6e-77 258.9 22.6 5.6e-77 258.9 22.6 2.0 1 1 1 2 2 2 1 Na+/H+ antiporter family Na_H_antiport_2 PF13726.6 gi|14520505|ref|NP_125980.1| - 0.03 14.4 0.5 0.03 14.4 0.5 3.0 3 0 0 3 3 3 0 Na+-H+ antiporter family PetG PF02529.15 gi|14520505|ref|NP_125980.1| - 0.075 12.9 0.8 0.43 10.5 0.8 2.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 Radical_SAM PF04055.21 gi|14520506|ref|NP_125981.1| - 4.7e-10 40.1 0.0 7.2e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF440 PF04269.12 gi|14520506|ref|NP_125981.1| - 0.021 15.1 0.7 0.049 13.9 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function, DUF440 Alfin PF12165.8 gi|14520506|ref|NP_125981.1| - 0.057 13.1 0.4 0.15 11.8 0.1 1.8 2 0 0 2 2 2 0 Alfin TYW3 PF02676.14 gi|14520507|ref|NP_125982.1| - 2.3e-42 144.7 0.0 3e-42 144.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TYW3 PMBR PF09373.10 gi|14520507|ref|NP_125982.1| - 0.15 12.3 0.1 2.2 8.6 0.0 2.5 2 0 0 2 2 2 0 Pseudomurein-binding repeat EVE PF01878.18 gi|14520508|ref|NP_125983.1| - 2e-05 24.6 0.0 2.7e-05 24.2 0.0 1.4 1 1 0 1 1 1 1 EVE domain Transglut_core PF01841.19 gi|14520509|ref|NP_125984.1| - 1.1e-07 32.3 0.0 2.2e-06 28.1 0.0 2.5 2 0 0 2 2 2 1 Transglutaminase-like superfamily DUF45 PF01863.17 gi|14520510|ref|NP_125985.1| - 8.4e-12 45.6 0.0 9.7e-12 45.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 Peptidase_M56 PF05569.11 gi|14520510|ref|NP_125985.1| - 0.00011 21.6 0.1 0.00013 21.3 0.1 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 SprT-like PF10263.9 gi|14520510|ref|NP_125985.1| - 0.0028 17.5 0.1 0.0032 17.3 0.1 1.3 1 1 0 1 1 1 1 SprT-like family WLM PF08325.10 gi|14520510|ref|NP_125985.1| - 0.068 13.2 0.1 0.087 12.9 0.1 1.2 1 0 0 1 1 1 0 WLM domain Peptidase_M48 PF01435.18 gi|14520510|ref|NP_125985.1| - 0.11 12.3 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M48 SWI2_SNF2 PF18766.1 gi|14520511|ref|NP_125986.1| - 2e-50 171.5 0.1 4.7e-50 170.3 0.1 1.6 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|14520511|ref|NP_125986.1| - 3.6e-34 118.4 0.3 2.1e-33 115.9 0.0 2.5 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|14520511|ref|NP_125986.1| - 3.4e-21 76.0 0.2 1.1e-20 74.3 0.2 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF1241 PF06840.11 gi|14520511|ref|NP_125986.1| - 0.00074 19.2 1.3 0.012 15.3 0.3 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1241) COOH-NH2_lig PF14395.6 gi|14520511|ref|NP_125986.1| - 0.027 13.7 0.7 0.11 11.8 0.1 2.3 2 0 0 2 2 2 0 Phage phiEco32-like COOH.NH2 ligase-type 2 TniB PF05621.11 gi|14520511|ref|NP_125986.1| - 0.056 12.8 0.2 0.3 10.5 0.0 2.3 3 0 0 3 3 3 0 Bacterial TniB protein DUF262 PF03235.14 gi|14520511|ref|NP_125986.1| - 0.067 13.3 0.2 0.067 13.3 0.2 3.7 5 1 0 5 5 4 0 Protein of unknown function DUF262 AAA_14 PF13173.6 gi|14520511|ref|NP_125986.1| - 0.071 13.2 3.1 0.24 11.4 0.1 3.3 3 1 1 4 4 4 0 AAA domain Ectoine_synth PF06339.12 gi|14520511|ref|NP_125986.1| - 0.11 12.7 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 Ectoine synthase AAA_22 PF13401.6 gi|14520511|ref|NP_125986.1| - 0.12 12.6 0.0 1.2 9.4 0.0 2.7 1 1 0 1 1 1 0 AAA domain DUF3135 PF11333.8 gi|14520511|ref|NP_125986.1| - 0.2 11.9 1.9 27 5.1 0.2 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3135) T4_Rnl2_C PF18043.1 gi|14520511|ref|NP_125986.1| - 0.29 11.3 6.4 0.59 10.3 0.1 4.2 3 1 1 4 4 4 0 T4 RNA ligase 2 C-terminal DUF4145 PF13643.6 gi|14520511|ref|NP_125986.1| - 0.91 9.7 4.8 6.3 7.0 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4145) RhoGEF67_u2 PF16614.5 gi|14520511|ref|NP_125986.1| - 0.93 9.6 2.8 9.4 6.4 0.4 2.5 2 0 0 2 2 2 0 Unstructured region two on RhoGEF 6 and 7 End3 PF12761.7 gi|14520511|ref|NP_125986.1| - 1.5 8.9 5.3 0.9 9.7 0.6 2.5 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 PhoU PF01895.19 gi|14520511|ref|NP_125986.1| - 7.6 7.1 12.2 6.4 7.3 0.4 5.3 5 0 0 5 5 5 0 PhoU domain ATPase_2 PF01637.18 gi|14520512|ref|NP_125987.1| - 7.4e-12 45.7 0.0 1.4e-11 44.7 0.0 1.4 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14520512|ref|NP_125987.1| - 1.1e-09 38.4 0.0 7.2e-08 32.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14520512|ref|NP_125987.1| - 9.6e-09 35.8 0.2 2e-08 34.8 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520512|ref|NP_125987.1| - 8.8e-07 29.3 0.0 6.9e-06 26.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_35 PF14516.6 gi|14520512|ref|NP_125987.1| - 0.0018 17.2 0.0 0.0026 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain PhoH PF02562.16 gi|14520512|ref|NP_125987.1| - 0.018 14.5 0.0 0.072 12.5 0.0 1.9 1 1 0 1 1 1 0 PhoH-like protein AAA PF00004.29 gi|14520512|ref|NP_125987.1| - 0.025 15.0 0.2 0.14 12.6 0.0 2.3 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) CbiA PF01656.23 gi|14520512|ref|NP_125987.1| - 0.032 14.3 0.0 0.18 11.9 0.0 2.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Methylase_S PF01420.19 gi|14520513|ref|NP_125988.1| - 2.4e-45 154.8 3.1 1.4e-22 80.7 0.7 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF2890 PF11081.8 gi|14520513|ref|NP_125988.1| - 0.038 14.1 0.9 1.9 8.6 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2890) BPA_C PF18040.1 gi|14520513|ref|NP_125988.1| - 0.11 12.4 0.0 2.4 8.1 0.0 2.5 2 0 0 2 2 2 0 beta porphyranase A C-terminal RbpA PF13397.6 gi|14520513|ref|NP_125988.1| - 0.12 13.0 0.2 24 5.6 0.0 2.8 3 0 0 3 3 3 0 RNA polymerase-binding protein Lge1 PF11488.8 gi|14520513|ref|NP_125988.1| - 0.47 10.7 2.0 4.2 7.6 0.2 2.5 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 MRPL52 PF18699.1 gi|14520513|ref|NP_125988.1| - 0.47 10.7 5.1 13 6.1 1.6 2.4 2 0 0 2 2 2 0 Mitoribosomal protein mL52 N6_Mtase PF02384.16 gi|14520514|ref|NP_125989.1| - 3.5e-102 341.9 0.2 6.6e-102 340.9 0.0 1.6 2 0 0 2 2 2 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|14520514|ref|NP_125989.1| - 3.5e-07 30.9 2.3 2.2e-06 28.3 2.3 2.4 1 0 0 1 1 1 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|14520514|ref|NP_125989.1| - 4e-06 26.7 0.0 1.1e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Retro_M PF02813.14 gi|14520514|ref|NP_125989.1| - 0.02 15.3 0.0 2.1 8.8 0.0 2.7 2 0 0 2 2 2 0 Retroviral M domain Cons_hypoth95 PF03602.15 gi|14520514|ref|NP_125989.1| - 0.09 12.4 0.0 8.2 6.0 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 MTS PF05175.14 gi|14520514|ref|NP_125989.1| - 0.16 11.5 0.0 1.5 8.4 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase small domain GerD PF17898.1 gi|14520514|ref|NP_125989.1| - 1.8 8.5 5.2 0.63 10.0 0.3 2.5 3 0 0 3 3 3 0 Spore germination GerD central core domain ABC_membrane PF00664.23 gi|14520515|ref|NP_125990.1| - 1.6e-57 195.3 11.7 2e-57 195.0 11.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|14520515|ref|NP_125990.1| - 4e-34 118.1 0.0 7e-34 117.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA PF00004.29 gi|14520515|ref|NP_125990.1| - 0.00036 21.0 0.9 0.021 15.2 0.9 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|14520515|ref|NP_125990.1| - 0.0012 18.3 1.0 0.033 13.6 0.1 2.3 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 gi|14520515|ref|NP_125990.1| - 0.014 15.5 0.1 0.047 13.8 0.0 1.9 2 0 0 2 2 1 0 Helicase HerA, central domain AAA_23 PF13476.6 gi|14520515|ref|NP_125990.1| - 0.014 15.9 0.0 0.042 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|14520515|ref|NP_125990.1| - 0.018 14.0 0.0 0.044 12.7 0.0 1.7 1 0 0 1 1 1 0 AAA-like domain IstB_IS21 PF01695.17 gi|14520515|ref|NP_125990.1| - 0.029 14.1 0.3 9.2 5.9 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_22 PF13401.6 gi|14520515|ref|NP_125990.1| - 0.038 14.3 0.3 0.22 11.8 0.1 2.5 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|14520515|ref|NP_125990.1| - 0.045 13.8 0.0 0.17 12.0 0.0 2.0 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 gi|14520515|ref|NP_125990.1| - 0.052 12.8 0.0 0.65 9.2 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin NB-ARC PF00931.22 gi|14520515|ref|NP_125990.1| - 0.052 12.7 0.1 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain Sigma54_activat PF00158.26 gi|14520515|ref|NP_125990.1| - 0.074 12.8 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain RsgA_GTPase PF03193.16 gi|14520515|ref|NP_125990.1| - 0.1 12.5 0.0 0.25 11.2 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase Ribosomal_S9 PF00380.19 gi|14520515|ref|NP_125990.1| - 0.11 13.0 0.1 2.1 8.9 0.1 2.8 3 0 0 3 3 3 0 Ribosomal protein S9/S16 AAA_21 PF13304.6 gi|14520515|ref|NP_125990.1| - 0.12 12.1 0.5 11 5.8 0.2 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|14520515|ref|NP_125990.1| - 0.19 11.4 0.1 0.69 9.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain ABC_membrane PF00664.23 gi|14520516|ref|NP_125991.1| - 7.7e-47 160.2 22.4 9.7e-47 159.9 22.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|14520516|ref|NP_125991.1| - 2.4e-37 128.5 0.0 4.1e-37 127.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|14520516|ref|NP_125991.1| - 1.1e-05 25.9 0.0 2.1e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|14520516|ref|NP_125991.1| - 1.7e-05 24.4 1.5 0.00085 18.8 1.5 2.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|14520516|ref|NP_125991.1| - 0.00032 20.6 0.5 0.12 12.1 0.1 2.5 2 1 1 3 3 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|14520516|ref|NP_125991.1| - 0.00049 19.8 0.0 0.0011 18.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|14520516|ref|NP_125991.1| - 0.0017 18.7 0.5 0.0092 16.4 0.5 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|14520516|ref|NP_125991.1| - 0.0019 18.2 0.8 0.012 15.6 0.1 2.2 2 0 0 2 2 2 1 NTPase DUF815 PF05673.13 gi|14520516|ref|NP_125991.1| - 0.0025 17.0 0.0 0.0045 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 gi|14520516|ref|NP_125991.1| - 0.0047 17.5 0.1 0.014 15.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|14520516|ref|NP_125991.1| - 0.0065 16.2 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain G-alpha PF00503.20 gi|14520516|ref|NP_125991.1| - 0.0084 15.3 0.0 0.013 14.7 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit AAA_5 PF07728.14 gi|14520516|ref|NP_125991.1| - 0.013 15.5 0.1 0.047 13.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 gi|14520516|ref|NP_125991.1| - 0.017 15.4 0.4 0.063 13.6 0.4 2.0 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|14520516|ref|NP_125991.1| - 0.027 14.2 0.0 0.065 12.9 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 gi|14520516|ref|NP_125991.1| - 0.027 14.4 0.3 0.077 12.9 0.0 1.8 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_22 PF13401.6 gi|14520516|ref|NP_125991.1| - 0.027 14.7 0.1 0.11 12.8 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|14520516|ref|NP_125991.1| - 0.051 14.1 0.2 0.21 12.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|14520516|ref|NP_125991.1| - 0.058 12.8 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_13 PF13166.6 gi|14520516|ref|NP_125991.1| - 0.075 11.7 0.0 1.7 7.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|14520516|ref|NP_125991.1| - 0.13 11.5 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 gi|14520516|ref|NP_125991.1| - 0.17 12.1 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATP-grasp_5 PF13549.6 gi|14520517|ref|NP_125992.1| - 3.3e-83 278.5 0.1 3.7e-83 278.3 0.1 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|14520517|ref|NP_125992.1| - 2.3e-08 33.8 0.1 3.8e-08 33.1 0.1 1.5 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|14520517|ref|NP_125992.1| - 0.00038 20.3 0.0 0.00068 19.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|14520517|ref|NP_125992.1| - 0.0014 18.2 0.0 0.0021 17.6 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|14520517|ref|NP_125992.1| - 0.0022 17.5 0.1 0.0048 16.4 0.0 1.7 1 1 1 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF5126 PF17166.4 gi|14520517|ref|NP_125992.1| - 0.05 13.5 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5126) RimK PF08443.11 gi|14520517|ref|NP_125992.1| - 0.057 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 RimK-like ATP-grasp domain PI_PP_C PF18365.1 gi|14520517|ref|NP_125992.1| - 0.077 13.0 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain Glutaredoxin PF00462.24 gi|14520517|ref|NP_125992.1| - 0.13 12.5 0.5 16 5.8 0.0 2.9 3 0 0 3 3 3 0 Glutaredoxin DUF835 PF05763.12 gi|14520519|ref|NP_125994.1| - 8e-34 116.3 0.5 1.2e-33 115.7 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF835) SM-ATX PF14438.6 gi|14520520|ref|NP_125995.1| - 0.023 14.8 0.1 0.053 13.7 0.1 1.6 1 0 0 1 1 1 0 Ataxin 2 SM domain DUF4140 PF13600.6 gi|14520520|ref|NP_125995.1| - 0.057 13.9 0.0 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4139 PF13598.6 gi|14520520|ref|NP_125995.1| - 0.086 12.5 0.4 13 5.4 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4139) Epimerase PF01370.21 gi|14520521|ref|NP_125996.1| - 3.7e-66 223.0 0.0 4.4e-66 222.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|14520521|ref|NP_125996.1| - 4.7e-64 216.9 0.0 5.9e-64 216.6 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|14520521|ref|NP_125996.1| - 2.3e-22 79.3 0.0 3e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|14520521|ref|NP_125996.1| - 1.1e-20 74.0 0.0 1.3e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|14520521|ref|NP_125996.1| - 8e-17 61.3 0.7 7.3e-16 58.2 0.7 2.2 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|14520521|ref|NP_125996.1| - 5.8e-12 45.3 0.1 5.7e-09 35.5 0.0 2.4 1 1 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|14520521|ref|NP_125996.1| - 1.4e-07 31.6 0.0 2.5e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|14520521|ref|NP_125996.1| - 2.7e-05 23.9 0.1 5e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|14520521|ref|NP_125996.1| - 0.00018 21.0 0.4 0.00078 19.0 0.4 1.9 1 1 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 gi|14520521|ref|NP_125996.1| - 0.0002 21.6 0.0 0.00066 19.9 0.1 1.8 2 0 0 2 2 2 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|14520521|ref|NP_125996.1| - 0.0015 18.8 0.3 0.0029 17.9 0.1 1.5 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain PBECR3 PF18812.1 gi|14520521|ref|NP_125996.1| - 0.0093 15.9 0.1 5.1 7.1 0.0 2.4 2 0 0 2 2 2 2 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 adh_short_C2 PF13561.6 gi|14520521|ref|NP_125996.1| - 0.14 11.7 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase HAD_2 PF13419.6 gi|14520522|ref|NP_125997.1| - 5.6e-28 98.2 0.1 9.1e-28 97.5 0.1 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14520522|ref|NP_125997.1| - 1.9e-14 54.5 0.0 4.2e-13 50.1 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|14520522|ref|NP_125997.1| - 1.6e-09 38.5 0.1 1.9e-09 38.2 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14520522|ref|NP_125997.1| - 4.1e-07 30.0 0.0 1e-06 28.7 0.0 1.6 2 0 0 2 2 2 1 HAD-hyrolase-like DUF5449 PF17528.2 gi|14520522|ref|NP_125997.1| - 0.015 15.1 0.2 0.24 11.1 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5449) Acid_phosphat_B PF03767.14 gi|14520522|ref|NP_125997.1| - 0.037 13.6 0.2 0.15 11.6 0.2 2.1 1 1 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) tify PF06200.14 gi|14520522|ref|NP_125997.1| - 0.16 11.3 0.1 0.29 10.5 0.1 1.4 1 0 0 1 1 1 0 tify domain HTH_5 PF01022.20 gi|14520523|ref|NP_125998.1| - 1.7e-15 56.6 0.2 3.8e-15 55.5 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14520523|ref|NP_125998.1| - 3.9e-13 49.3 0.4 1.1e-12 47.8 0.4 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|14520523|ref|NP_125998.1| - 4.7e-06 26.1 1.2 0.00028 20.4 1.6 3.2 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|14520523|ref|NP_125998.1| - 3.6e-05 23.6 0.3 0.00021 21.1 0.2 2.1 2 0 0 2 2 2 1 MarR family ArsR PF09824.9 gi|14520523|ref|NP_125998.1| - 8.3e-05 22.2 1.2 0.00069 19.3 0.0 2.2 2 1 0 2 2 2 1 ArsR transcriptional regulator TrmB PF01978.19 gi|14520523|ref|NP_125998.1| - 9.2e-05 22.3 0.1 0.00025 20.9 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|14520523|ref|NP_125998.1| - 0.00015 21.7 1.1 0.0006 19.7 0.2 2.4 2 1 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_11 PF08279.12 gi|14520523|ref|NP_125998.1| - 0.0011 18.9 0.9 0.0033 17.3 0.2 2.1 2 0 0 2 2 2 1 HTH domain HTH_CodY PF08222.11 gi|14520523|ref|NP_125998.1| - 0.0033 16.9 0.0 0.01 15.4 0.0 1.7 1 0 0 1 1 1 1 CodY helix-turn-helix domain Sigma54_CBD PF04963.13 gi|14520523|ref|NP_125998.1| - 0.0081 16.0 2.0 0.012 15.5 1.5 1.5 1 1 0 1 1 1 1 Sigma-54 factor, core binding domain Cauli_AT PF03233.13 gi|14520523|ref|NP_125998.1| - 0.0085 16.0 1.5 0.024 14.6 1.5 1.7 2 0 0 2 2 2 1 Aphid transmission protein MarR PF01047.22 gi|14520523|ref|NP_125998.1| - 0.0094 15.9 0.2 0.089 12.7 0.1 2.3 2 0 0 2 2 2 1 MarR family DUF2205 PF10224.9 gi|14520523|ref|NP_125998.1| - 0.01 15.8 5.4 0.028 14.4 4.1 2.1 1 1 1 2 2 2 0 Short coiled-coil protein GntR PF00392.21 gi|14520523|ref|NP_125998.1| - 0.016 14.8 0.2 0.048 13.3 0.2 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|14520523|ref|NP_125998.1| - 0.021 14.6 0.0 0.095 12.5 0.0 2.1 2 0 0 2 2 2 0 HTH DNA binding domain HxlR PF01638.17 gi|14520523|ref|NP_125998.1| - 0.029 14.2 3.8 0.033 14.0 0.2 2.5 2 1 0 2 2 2 0 HxlR-like helix-turn-helix DUF2513 PF10711.9 gi|14520523|ref|NP_125998.1| - 0.03 14.6 0.6 0.18 12.1 0.0 2.1 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) HSP70 PF00012.20 gi|14520523|ref|NP_125998.1| - 0.031 12.5 0.8 0.032 12.4 0.8 1.1 1 0 0 1 1 1 0 Hsp70 protein LexA_DNA_bind PF01726.16 gi|14520523|ref|NP_125998.1| - 0.045 13.5 0.1 0.17 11.6 0.0 2.0 2 0 0 2 2 2 0 LexA DNA binding domain DASH_Dad4 PF08650.10 gi|14520523|ref|NP_125998.1| - 0.048 13.6 1.0 0.099 12.6 0.7 1.7 1 1 0 1 1 1 0 DASH complex subunit Dad4 PKHD_C PF18331.1 gi|14520523|ref|NP_125998.1| - 0.052 13.6 0.0 0.19 11.8 0.0 1.9 2 0 0 2 2 2 0 PKHD-type hydroxylase C-terminal domain Sdh5 PF03937.16 gi|14520523|ref|NP_125998.1| - 0.058 13.4 0.3 0.22 11.5 0.1 2.0 1 1 0 1 1 1 0 Flavinator of succinate dehydrogenase Rrf2 PF02082.20 gi|14520523|ref|NP_125998.1| - 0.063 13.6 0.4 0.34 11.3 0.1 2.2 2 1 0 2 2 2 0 Transcriptional regulator HTH_27 PF13463.6 gi|14520523|ref|NP_125998.1| - 0.069 13.6 0.0 0.17 12.4 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1002 PF06207.11 gi|14520523|ref|NP_125998.1| - 0.085 12.4 1.5 0.11 12.0 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) DprA_WH PF17782.1 gi|14520523|ref|NP_125998.1| - 0.091 12.9 0.7 0.18 11.9 0.7 1.4 1 0 0 1 1 1 0 DprA winged helix domain YabA PF06156.13 gi|14520523|ref|NP_125998.1| - 0.23 12.1 4.2 0.41 11.3 4.2 1.5 1 0 0 1 1 1 0 Initiation control protein YabA Sulfolobus_pRN PF05584.11 gi|14520523|ref|NP_125998.1| - 0.24 11.4 4.3 0.069 13.2 1.1 1.8 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein IF2_N PF04760.15 gi|14520523|ref|NP_125998.1| - 0.31 10.9 3.6 0.34 10.8 0.1 2.6 3 0 0 3 3 2 0 Translation initiation factor IF-2, N-terminal region EF-G-binding_N PF07299.11 gi|14520523|ref|NP_125998.1| - 0.65 10.5 5.2 2.5 8.7 1.0 2.6 1 1 1 2 2 2 0 Elongation factor G-binding protein, N-terminal Gar1 PF04410.14 gi|14520524|ref|NP_125999.1| - 3.7e-10 39.8 0.0 4.1e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region Metallophos_2 PF12850.7 gi|14520525|ref|NP_126000.1| - 1.4e-30 106.6 0.0 1.6e-30 106.4 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|14520525|ref|NP_126000.1| - 2.4e-07 31.5 0.3 1.4e-05 25.7 0.3 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Cas_Cas4 PF01930.17 gi|14520526|ref|NP_126001.1| - 4.7e-08 33.3 0.0 0.01 16.0 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|14520526|ref|NP_126001.1| - 2.1e-05 24.6 0.0 7.2e-05 22.8 0.0 1.7 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily CBS PF00571.28 gi|14520527|ref|NP_126002.1| - 1.7e-21 76.4 2.0 4.2e-10 39.9 0.4 2.3 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.22 gi|14520527|ref|NP_126002.1| - 4.3e-15 55.5 0.9 9.2e-15 54.4 0.8 1.6 2 0 0 2 2 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|14520527|ref|NP_126002.1| - 5.3e-12 45.6 0.4 1.2e-11 44.4 0.3 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|14520527|ref|NP_126002.1| - 4.3e-10 39.8 0.0 7.2e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|14520527|ref|NP_126002.1| - 9e-05 22.8 0.1 0.00021 21.7 0.1 1.6 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain MqsA_antitoxin PF15731.5 gi|14520527|ref|NP_126002.1| - 0.00027 21.0 0.0 0.00057 20.0 0.0 1.6 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_25 PF13413.6 gi|14520527|ref|NP_126002.1| - 0.00027 20.7 0.1 0.0006 19.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|14520527|ref|NP_126002.1| - 0.00034 20.5 0.1 0.0014 18.6 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Phage_TAC_12 PF12363.8 gi|14520527|ref|NP_126002.1| - 0.0071 16.8 0.1 0.012 16.1 0.1 1.4 1 0 0 1 1 1 1 Phage tail assembly chaperone protein, TAC Mltc_N PF11873.8 gi|14520527|ref|NP_126002.1| - 0.014 15.1 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Membrane-bound lytic murein transglycosylase C, N-terminal domain Thioredoxin_3 PF13192.6 gi|14520527|ref|NP_126002.1| - 0.016 15.2 1.4 0.07 13.2 0.2 2.2 2 0 0 2 2 2 0 Thioredoxin domain SelB-wing_2 PF09106.11 gi|14520527|ref|NP_126002.1| - 0.055 13.7 0.0 13 6.0 0.0 2.3 2 0 0 2 2 2 0 Elongation factor SelB, winged helix Put_DNA-bind_N PF06971.13 gi|14520527|ref|NP_126002.1| - 0.088 12.8 0.2 8.7 6.5 0.0 2.5 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus DHC_N2 PF08393.13 gi|14520527|ref|NP_126002.1| - 0.093 11.8 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 Pyr_redox_2 PF07992.14 gi|14520528|ref|NP_126003.1| - 3.8e-39 134.7 7.1 6.5e-39 133.9 7.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer2_4 PF13510.6 gi|14520528|ref|NP_126003.1| - 2.5e-26 91.5 0.0 4.9e-26 90.6 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Pyr_redox_3 PF13738.6 gi|14520528|ref|NP_126003.1| - 4.4e-16 59.0 2.8 2e-13 50.2 2.1 2.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|14520528|ref|NP_126003.1| - 8.6e-16 58.0 7.9 2.6e-08 33.4 1.2 4.2 2 2 2 4 4 4 4 FAD binding domain FAD_oxidored PF12831.7 gi|14520528|ref|NP_126003.1| - 1e-14 54.8 13.5 3.4e-13 49.7 1.1 3.4 2 2 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|14520528|ref|NP_126003.1| - 2.5e-14 52.8 11.7 5.2e-10 38.6 0.9 3.2 3 0 0 3 3 3 3 HI0933-like protein Pyr_redox PF00070.27 gi|14520528|ref|NP_126003.1| - 2.1e-13 50.6 9.6 5.2e-05 23.7 0.9 4.3 3 1 1 4 4 4 3 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|14520528|ref|NP_126003.1| - 1.7e-10 40.9 4.3 1.3e-05 25.3 0.1 3.3 3 0 0 3 3 2 2 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|14520528|ref|NP_126003.1| - 4.4e-09 36.4 10.9 0.0029 17.3 0.1 3.5 3 1 0 3 3 3 3 FAD dependent oxidoreductase GIDA PF01134.22 gi|14520528|ref|NP_126003.1| - 2.7e-08 33.3 20.0 1.5e-05 24.2 1.2 4.2 3 1 0 4 4 4 3 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|14520528|ref|NP_126003.1| - 3.7e-08 33.0 5.5 0.00046 19.6 0.2 2.9 3 0 0 3 3 3 2 FAD binding domain Thi4 PF01946.17 gi|14520528|ref|NP_126003.1| - 2.9e-07 30.0 1.2 0.0012 18.2 0.0 2.5 2 0 0 2 2 2 2 Thi4 family NAD_binding_7 PF13241.6 gi|14520528|ref|NP_126003.1| - 6.7e-07 29.7 1.3 0.013 15.9 0.1 2.8 2 1 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|14520528|ref|NP_126003.1| - 7.5e-05 22.1 0.3 7.5e-05 22.1 0.3 3.3 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|14520528|ref|NP_126003.1| - 0.00088 18.4 7.1 0.014 14.5 1.1 2.7 2 1 1 3 3 3 2 Lycopene cyclase protein ApbA PF02558.16 gi|14520528|ref|NP_126003.1| - 0.0033 17.1 7.6 0.022 14.4 0.2 4.1 4 1 1 5 5 5 1 Ketopantoate reductase PanE/ApbA ELFV_dehydrog PF00208.21 gi|14520528|ref|NP_126003.1| - 0.0054 16.5 0.1 0.92 9.2 0.0 2.5 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TrkA_N PF02254.18 gi|14520528|ref|NP_126003.1| - 0.0063 16.8 0.8 1.7 9.0 0.0 3.0 2 0 0 2 2 2 1 TrkA-N domain 3HCDH_N PF02737.18 gi|14520528|ref|NP_126003.1| - 0.013 15.4 3.5 2.6 7.9 0.1 2.8 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PFK PF00365.20 gi|14520528|ref|NP_126003.1| - 0.017 14.5 0.0 0.037 13.4 0.0 1.6 1 0 0 1 1 1 0 Phosphofructokinase UDPG_MGDP_dh_N PF03721.14 gi|14520528|ref|NP_126003.1| - 0.046 13.3 1.2 10 5.7 0.1 2.9 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Fer2_3 PF13085.6 gi|14520528|ref|NP_126003.1| - 0.056 13.5 0.0 0.098 12.7 0.0 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Amino_oxidase PF01593.24 gi|14520528|ref|NP_126003.1| - 0.096 11.9 0.0 2.7 7.2 0.0 2.6 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase F420_oxidored PF03807.17 gi|14520528|ref|NP_126003.1| - 0.11 13.1 4.6 0.22 12.1 0.3 3.3 4 0 0 4 4 3 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_9 PF13454.6 gi|14520528|ref|NP_126003.1| - 0.22 11.5 5.5 0.96 9.4 0.1 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding DHODB_Fe-S_bind PF10418.9 gi|14520528|ref|NP_126003.1| - 0.48 10.3 1.8 0.86 9.5 1.8 1.4 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Trp_halogenase PF04820.14 gi|14520528|ref|NP_126003.1| - 0.59 8.9 6.3 0.1 11.4 0.6 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Shikimate_DH PF01488.20 gi|14520528|ref|NP_126003.1| - 0.65 10.0 3.2 3.4 7.7 0.3 2.8 3 0 0 3 3 2 0 Shikimate / quinate 5-dehydrogenase Fer4 PF00037.27 gi|14520529|ref|NP_126004.1| - 1.8e-08 33.9 17.0 5e-08 32.4 2.4 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14520529|ref|NP_126004.1| - 3.1e-07 30.2 14.1 1.9e-05 24.5 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520529|ref|NP_126004.1| - 1.9e-06 28.4 10.1 3.7e-06 27.4 10.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14520529|ref|NP_126004.1| - 2.2e-06 27.7 8.6 4e-06 26.9 8.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14520529|ref|NP_126004.1| - 4.8e-06 26.6 12.4 1e-05 25.6 12.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14520529|ref|NP_126004.1| - 1.5e-05 24.8 3.0 1.5e-05 24.8 3.0 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|14520529|ref|NP_126004.1| - 2.1e-05 24.6 13.6 3.7e-05 23.8 13.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|14520529|ref|NP_126004.1| - 0.00014 22.6 14.3 0.0014 19.4 5.2 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14520529|ref|NP_126004.1| - 0.00032 21.1 2.0 0.0067 16.9 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14520529|ref|NP_126004.1| - 0.00044 21.1 12.8 0.041 14.8 1.5 2.3 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|14520529|ref|NP_126004.1| - 0.0012 19.3 0.2 0.0012 19.3 0.2 2.6 2 1 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|14520529|ref|NP_126004.1| - 0.0027 18.4 0.9 0.0027 18.4 0.9 2.6 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|14520529|ref|NP_126004.1| - 0.0083 16.6 0.7 0.0083 16.6 0.7 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14520529|ref|NP_126004.1| - 1.6 9.3 12.9 0.32 11.6 2.8 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|14520529|ref|NP_126004.1| - 2.2 8.5 12.4 1.7e+02 2.5 12.8 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|14520529|ref|NP_126004.1| - 8.2 7.3 10.8 2.1 9.2 2.4 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain SO_alpha_A3 PF17806.1 gi|14520530|ref|NP_126005.1| - 2.7e-14 53.2 0.0 2.9e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_BFD PF04324.15 gi|14520530|ref|NP_126005.1| - 6.9e-14 51.9 0.9 8.7e-14 51.6 0.9 1.1 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain DAO PF01266.24 gi|14520531|ref|NP_126006.1| - 6.1e-76 256.3 0.0 6.9e-76 256.1 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|14520531|ref|NP_126006.1| - 1.2e-06 28.0 0.2 0.0016 17.8 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|14520531|ref|NP_126006.1| - 2.1e-06 27.9 0.2 5.9e-06 26.4 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|14520531|ref|NP_126006.1| - 2.2e-05 23.7 0.0 2.8e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|14520531|ref|NP_126006.1| - 2.7e-05 24.7 0.5 0.00058 20.4 0.3 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|14520531|ref|NP_126006.1| - 0.0014 18.0 0.4 0.032 13.5 0.3 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|14520531|ref|NP_126006.1| - 0.013 14.2 0.1 0.25 10.0 0.3 2.3 2 1 0 2 2 2 0 HI0933-like protein GIDA PF01134.22 gi|14520531|ref|NP_126006.1| - 0.04 13.0 0.1 0.068 12.2 0.1 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|14520531|ref|NP_126006.1| - 0.065 12.6 0.0 0.1 11.9 0.0 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|14520531|ref|NP_126006.1| - 0.096 12.0 0.1 0.18 11.1 0.1 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|14520531|ref|NP_126006.1| - 0.15 11.9 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|14520531|ref|NP_126006.1| - 0.16 12.6 1.9 0.29 11.7 0.6 2.2 2 1 1 3 3 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_9 PF13454.6 gi|14520531|ref|NP_126006.1| - 0.21 11.6 0.5 1.2 9.1 0.3 2.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding ApbA PF02558.16 gi|14520531|ref|NP_126006.1| - 0.22 11.1 0.5 0.49 10.0 0.5 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 gi|14520531|ref|NP_126006.1| - 0.23 10.6 0.1 0.35 10.1 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|14520531|ref|NP_126006.1| - 0.3 10.7 0.8 0.51 9.9 0.8 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EMC3_TMCO1 PF01956.16 gi|14520532|ref|NP_126007.1| - 9.3e-26 90.6 4.3 1.1e-25 90.4 4.3 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like 60KD_IMP PF02096.20 gi|14520532|ref|NP_126007.1| - 5.8e-05 23.0 0.3 8e-05 22.6 0.3 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein DUF4199 PF13858.6 gi|14520532|ref|NP_126007.1| - 0.0005 20.5 0.6 0.00086 19.7 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF4199) S_4TM PF18159.1 gi|14520532|ref|NP_126007.1| - 0.033 13.5 0.2 0.053 12.8 0.0 1.4 1 1 0 1 1 1 0 SMODS-associating 4TM effector domain DUF3437 PF11919.8 gi|14520532|ref|NP_126007.1| - 0.12 12.3 0.3 0.17 11.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF2613 PF11021.8 gi|14520532|ref|NP_126007.1| - 0.19 11.9 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) Inj_translocase PF16928.5 gi|14520532|ref|NP_126007.1| - 0.21 11.0 0.7 0.28 10.6 0.7 1.1 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Swi5 PF07061.11 gi|14520532|ref|NP_126007.1| - 0.28 11.3 4.0 0.38 10.9 4.0 1.1 1 0 0 1 1 1 0 Swi5 Acyl-ACP_TE PF01643.17 gi|14520532|ref|NP_126007.1| - 0.4 9.9 3.3 0.89 8.8 1.2 2.0 1 1 1 2 2 2 0 Acyl-ACP thioesterase OmpH PF03938.14 gi|14520532|ref|NP_126007.1| - 1.5 9.2 9.4 2.2 8.6 9.4 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) LapA_dom PF06305.11 gi|14520532|ref|NP_126007.1| - 3 7.7 6.7 48 3.9 6.7 2.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain AAA_17 PF13207.6 gi|33356678|ref|NP_126008.2| - 1.1e-37 129.5 0.1 1.6e-37 128.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|33356678|ref|NP_126008.2| - 6.1e-10 39.7 0.1 1.6e-09 38.4 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 gi|33356678|ref|NP_126008.2| - 0.0003 21.2 0.5 0.00092 19.6 0.2 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|33356678|ref|NP_126008.2| - 0.0011 19.0 0.2 0.0043 17.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|33356678|ref|NP_126008.2| - 0.0022 18.4 0.3 0.0069 16.8 0.3 1.9 1 1 0 1 1 1 1 AAA ATPase domain CLP1_P PF16575.5 gi|33356678|ref|NP_126008.2| - 0.0048 16.7 0.1 0.065 13.0 0.0 2.0 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_28 PF13521.6 gi|33356678|ref|NP_126008.2| - 0.0062 16.8 0.1 0.012 15.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|33356678|ref|NP_126008.2| - 0.0081 16.2 0.7 0.026 14.5 0.1 2.0 1 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|33356678|ref|NP_126008.2| - 0.0088 16.3 2.0 0.11 12.7 2.0 2.1 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|33356678|ref|NP_126008.2| - 0.011 15.0 0.0 0.019 14.2 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain NTPase_1 PF03266.15 gi|33356678|ref|NP_126008.2| - 0.011 15.6 0.3 0.029 14.3 0.3 1.7 1 0 0 1 1 1 0 NTPase AAA_33 PF13671.6 gi|33356678|ref|NP_126008.2| - 0.017 15.3 0.2 0.036 14.2 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_3 PF07726.11 gi|33356678|ref|NP_126008.2| - 0.022 14.6 0.1 0.065 13.1 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 gi|33356678|ref|NP_126008.2| - 0.028 13.4 0.1 0.065 12.2 0.1 1.6 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PAS_9 PF13426.7 gi|33356678|ref|NP_126008.2| - 0.049 13.9 0.0 0.086 13.1 0.0 1.5 1 0 0 1 1 1 0 PAS domain APS_kinase PF01583.20 gi|33356678|ref|NP_126008.2| - 0.049 13.5 0.9 0.38 10.6 0.1 2.2 2 1 0 2 2 2 0 Adenylylsulphate kinase KTI12 PF08433.10 gi|33356678|ref|NP_126008.2| - 0.07 12.6 0.1 0.083 12.3 0.1 1.4 1 1 0 1 1 1 0 Chromatin associated protein KTI12 MMR_HSR1 PF01926.23 gi|33356678|ref|NP_126008.2| - 0.081 13.0 1.6 0.28 11.3 1.6 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF2075 PF09848.9 gi|33356678|ref|NP_126008.2| - 0.081 12.1 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 gi|33356678|ref|NP_126008.2| - 0.11 12.2 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ABC_tran PF00005.27 gi|33356678|ref|NP_126008.2| - 0.19 12.3 0.4 0.32 11.5 0.4 1.6 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 gi|33356678|ref|NP_126008.2| - 0.5 10.0 2.9 0.61 9.8 0.2 2.1 2 1 0 2 2 2 0 AAA domain SecY PF00344.20 gi|14520534|ref|NP_126009.1| - 2.7e-70 237.0 13.6 3.3e-70 236.8 13.6 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|14520534|ref|NP_126009.1| - 1.9e-10 40.4 0.2 1.9e-10 40.4 0.2 2.8 2 0 0 2 2 2 1 Plug domain of Sec61p Ribosomal_L27A PF00828.19 gi|14520535|ref|NP_126010.1| - 7.7e-20 71.9 1.0 1.2e-19 71.3 1.0 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A tRNA-synt_1d PF00750.19 gi|14520535|ref|NP_126010.1| - 0.11 11.4 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (R) Ribosomal_L30 PF00327.20 gi|14520536|ref|NP_126011.1| - 1.1e-16 60.4 1.1 2.6e-16 59.2 0.2 1.9 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e zf-SCNM1 PF15803.5 gi|14520536|ref|NP_126011.1| - 0.0037 16.9 0.2 0.009 15.6 0.2 1.7 1 0 0 1 1 1 1 Zinc-finger of sodium channel modifier 1 Ribosomal_S5_C PF03719.15 gi|14520537|ref|NP_126012.1| - 6.3e-22 76.8 0.2 1.4e-21 75.7 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|14520537|ref|NP_126012.1| - 3.1e-21 75.1 0.5 6.7e-21 74.0 0.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_L5e PF17144.4 gi|14520538|ref|NP_126013.1| - 3.1e-26 92.3 0.2 3.5e-15 56.4 0.1 2.5 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|14520538|ref|NP_126013.1| - 2.1e-12 47.8 0.3 3.8e-12 47.0 0.3 1.3 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_L18p PF00861.22 gi|14520538|ref|NP_126013.1| - 2.5e-09 37.5 0.0 3.6e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L19e PF01280.20 gi|14520539|ref|NP_126014.1| - 3.4e-59 199.0 14.7 3.8e-59 198.9 14.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e LpxI_N PF17930.1 gi|14520539|ref|NP_126014.1| - 0.1 12.5 0.5 0.19 11.6 0.1 1.6 2 0 0 2 2 2 0 LpxI N-terminal domain Sirohm_synth_C PF14823.6 gi|14520539|ref|NP_126014.1| - 2.5 7.8 7.2 0.13 11.9 0.4 2.3 2 1 0 3 3 3 0 Sirohaem biosynthesis protein C-terminal Ribosomal_L32e PF01655.18 gi|14520540|ref|NP_126015.1| - 1.2e-43 147.9 0.3 1.6e-43 147.5 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L6 PF00347.23 gi|14520541|ref|NP_126016.1| - 1.9e-37 127.8 12.2 8.1e-20 71.3 4.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 YbbR PF07949.12 gi|14520541|ref|NP_126016.1| - 0.001 19.4 4.8 0.79 10.1 0.4 3.2 3 0 0 3 3 3 2 YbbR-like protein DUF4115 PF13464.6 gi|14520541|ref|NP_126016.1| - 0.045 13.9 0.7 0.84 9.9 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4115) TubC_N PF18563.1 gi|14520541|ref|NP_126016.1| - 0.081 12.9 0.0 1.7 8.7 0.0 2.3 2 0 0 2 2 2 0 TubC N-terminal docking domain DUF4469 PF14734.6 gi|14520541|ref|NP_126016.1| - 0.088 13.0 0.2 1.9 8.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4469) with IG-like fold HSP20 PF00011.21 gi|14520541|ref|NP_126016.1| - 0.094 12.9 1.9 18 5.5 0.1 3.1 3 1 0 3 3 3 0 Hsp20/alpha crystallin family Glyco_hydro_65C PF03633.15 gi|14520541|ref|NP_126016.1| - 0.1 12.5 0.9 6.1 6.8 0.1 3.0 3 1 0 3 3 3 0 Glycosyl hydrolase family 65, C-terminal domain ChpA-C PF03777.13 gi|14520541|ref|NP_126016.1| - 0.19 11.6 1.5 4.3 7.3 0.2 2.4 2 0 0 2 2 2 0 ChpA-C CooT PF10133.9 gi|14520541|ref|NP_126016.1| - 0.27 11.5 1.4 2.9 8.2 0.3 2.7 2 1 0 2 2 2 0 CO dehydrogenase accessory protein CooT Peptidase_M60_C PF18630.1 gi|14520541|ref|NP_126016.1| - 0.46 10.6 4.1 41 4.4 0.0 3.5 4 0 0 4 4 4 0 Peptidase M60 C-terminal domain Ribosomal_S8 PF00410.19 gi|14520542|ref|NP_126017.1| - 1.1e-28 99.8 0.0 1.5e-28 99.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|14520543|ref|NP_126018.1| - 7.8e-09 35.2 5.6 8.6e-09 35.0 5.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.14 gi|14520543|ref|NP_126018.1| - 0.13 12.2 4.5 0.2 11.5 4.5 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS DUF2039 PF10217.9 gi|14520543|ref|NP_126018.1| - 0.13 12.6 1.7 3.8 7.9 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) Ribosomal_L5_C PF00673.21 gi|14520544|ref|NP_126019.1| - 5.2e-27 93.9 0.0 9.9e-27 93.0 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|14520544|ref|NP_126019.1| - 1.5e-21 76.4 0.3 2.5e-21 75.7 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|14520545|ref|NP_126020.1| - 8e-24 83.3 0.1 1.5e-23 82.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|14520545|ref|NP_126020.1| - 6.3e-18 64.6 6.1 1.2e-17 63.7 6.1 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|14520545|ref|NP_126020.1| - 3.9e-13 48.9 0.1 9e-13 47.7 0.1 1.7 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 gi|14520545|ref|NP_126020.1| - 0.00081 19.3 0.3 0.0016 18.4 0.3 1.5 1 0 0 1 1 1 1 KOW motif Ribosomal_L26 PF16906.5 gi|14520546|ref|NP_126021.1| - 7.1e-37 125.7 0.7 8.4e-37 125.5 0.7 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|14520546|ref|NP_126021.1| - 4e-10 39.3 3.7 7.2e-10 38.5 3.7 1.4 1 0 0 1 1 1 1 KOW motif hSH3 PF14603.6 gi|14520546|ref|NP_126021.1| - 0.067 13.6 0.0 0.092 13.2 0.0 1.3 1 1 0 1 1 1 0 Helically-extended SH3 domain ribosomal_L24 PF17136.4 gi|14520546|ref|NP_126021.1| - 0.15 12.4 2.0 2.8 8.4 0.1 2.4 1 1 1 2 2 2 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 Ribosomal_L14 PF00238.19 gi|14520547|ref|NP_126022.1| - 5e-37 126.7 1.6 5.7e-37 126.5 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DUF5335 PF17269.2 gi|14520547|ref|NP_126022.1| - 0.032 14.1 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5335) Ribosomal_S17 PF00366.20 gi|161723321|ref|NP_126023.2| - 4.5e-27 93.9 1.0 5.6e-27 93.6 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|161723321|ref|NP_126023.2| - 0.0046 17.3 0.0 0.0097 16.3 0.0 1.6 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal DUF3540 PF12059.8 gi|161723321|ref|NP_126023.2| - 0.056 13.3 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3540) UPF0086 PF01868.16 gi|14520549|ref|NP_126024.1| - 1.7e-23 82.3 0.0 2.8e-23 81.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function UPF0086 SUI1 PF01253.22 gi|14520550|ref|NP_126025.1| - 3.5e-20 72.3 0.3 4.2e-20 72.0 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|14520550|ref|NP_126025.1| - 1.2e-05 25.5 0.2 1.7e-05 25.1 0.2 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) Histone_HNS PF00816.21 gi|14520550|ref|NP_126025.1| - 0.11 13.3 1.4 0.73 10.7 0.7 1.9 1 1 1 2 2 2 0 H-NS histone family Transketolase_C PF02780.20 gi|14520550|ref|NP_126025.1| - 0.14 12.0 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Transketolase, C-terminal domain Ribosomal_L29 PF00831.23 gi|33356679|ref|NP_126026.2| - 1.5e-17 63.3 4.2 1.5e-17 63.3 4.2 1.3 2 0 0 2 2 2 1 Ribosomal L29 protein Ribosomal_S3_C PF00189.20 gi|14520552|ref|NP_126027.1| - 4.6e-24 84.7 1.9 8.1e-24 84.0 1.9 1.4 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|14520552|ref|NP_126027.1| - 5.2e-15 55.0 0.1 1.3e-14 53.8 0.1 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|14520552|ref|NP_126027.1| - 0.11 12.4 0.2 0.11 12.4 0.2 2.2 3 0 0 3 3 3 0 KH domain Ribosomal_L22 PF00237.19 gi|14520553|ref|NP_126028.1| - 2.3e-29 101.6 0.0 2.9e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S19 PF00203.21 gi|14520554|ref|NP_126029.1| - 2.9e-36 123.2 0.2 3.8e-36 122.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 bZIP_Maf PF03131.17 gi|14520554|ref|NP_126029.1| - 0.0031 18.0 0.7 0.0052 17.3 0.7 1.4 1 0 0 1 1 1 1 bZIP Maf transcription factor Ribosomal_L39 PF00832.20 gi|14520554|ref|NP_126029.1| - 0.013 15.1 0.3 0.026 14.1 0.3 1.5 1 0 0 1 1 1 0 Ribosomal L39 protein Citrate_synt PF00285.21 gi|14520554|ref|NP_126029.1| - 0.014 14.5 0.0 0.014 14.5 0.0 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain pPIWI_RE_Z PF18155.1 gi|14520554|ref|NP_126029.1| - 0.061 13.2 0.0 0.082 12.8 0.0 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z Sas10 PF09368.10 gi|14520554|ref|NP_126029.1| - 0.065 13.7 2.7 0.14 12.6 2.7 1.5 1 0 0 1 1 1 0 Sas10 C-terminal domain Ribosomal_L2_C PF03947.18 gi|14520555|ref|NP_126030.1| - 1.1e-43 148.4 0.2 1.8e-43 147.7 0.2 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|14520555|ref|NP_126030.1| - 3.8e-22 78.0 0.0 1.6e-21 76.0 0.0 2.1 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain MMTV_SAg PF01054.17 gi|14520555|ref|NP_126030.1| - 0.082 12.4 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen Ribosomal_L23 PF00276.20 gi|14520556|ref|NP_126031.1| - 8.5e-21 74.1 6.4 7.9e-20 71.0 6.4 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 TusA PF01206.17 gi|14520556|ref|NP_126031.1| - 0.022 14.6 0.1 0.027 14.3 0.1 1.3 1 0 0 1 1 1 0 Sulfurtransferase TusA DNA_mis_repair PF01119.19 gi|14520556|ref|NP_126031.1| - 0.052 13.2 0.1 0.058 13.1 0.1 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein, C-terminal domain Mrr_N PF14338.6 gi|14520556|ref|NP_126031.1| - 0.12 12.6 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Mrr N-terminal domain Ribosomal_L4 PF00573.22 gi|14520557|ref|NP_126032.1| - 1.7e-48 164.9 0.1 2e-48 164.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF2149 PF09919.9 gi|14520557|ref|NP_126032.1| - 0.049 13.9 0.1 0.092 13.0 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) Ribosomal_L3 PF00297.22 gi|14520558|ref|NP_126033.1| - 8.8e-93 311.2 0.5 9.8e-93 311.1 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Methyltrn_RNA_3 PF02598.17 gi|14520559|ref|NP_126034.1| - 3.3e-52 177.8 0.0 3.8e-52 177.6 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.19 gi|14520559|ref|NP_126034.1| - 5.1e-06 26.7 0.0 0.06 13.5 0.0 2.2 2 0 0 2 2 2 2 SpoU rRNA Methylase family CBS PF00571.28 gi|14520560|ref|NP_126035.1| - 3.1e-49 165.2 11.6 1.3e-13 51.1 0.4 4.2 4 0 0 4 4 4 4 CBS domain IF3_N PF05198.16 gi|14520560|ref|NP_126035.1| - 0.0001 22.5 0.3 1.8 8.9 0.0 3.6 3 0 0 3 3 3 2 Translation initiation factor IF-3, N-terminal domain PRC PF05239.16 gi|14520560|ref|NP_126035.1| - 0.00035 20.6 3.9 1.7 8.8 0.0 4.0 4 0 0 4 4 4 2 PRC-barrel domain sCache_3_2 PF17203.4 gi|14520560|ref|NP_126035.1| - 0.00081 19.5 1.4 6.9 6.8 0.0 4.0 3 1 1 4 4 4 1 Single cache domain 3 MreC PF04085.14 gi|14520560|ref|NP_126035.1| - 0.01 15.8 1.3 8.7 6.2 0.0 3.9 3 1 0 3 3 3 0 rod shape-determining protein MreC CheW PF01584.19 gi|14520560|ref|NP_126035.1| - 0.26 10.9 2.6 0.88 9.2 0.1 2.8 3 0 0 3 3 3 0 CheW-like domain SepF PF04472.12 gi|14520561|ref|NP_126036.1| - 4.5e-10 39.7 0.0 6.7e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Cell division protein SepF HD PF01966.22 gi|14520562|ref|NP_126037.1| - 4e-19 69.0 1.0 1.2e-18 67.4 1.0 1.9 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 gi|14520562|ref|NP_126037.1| - 0.0062 16.0 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 HDOD domain CBFD_NFYB_HMF PF00808.23 gi|14520563|ref|NP_126038.1| - 2.2e-20 72.7 0.5 2.4e-20 72.6 0.5 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|14520563|ref|NP_126038.1| - 4.6e-10 40.0 0.2 5e-10 39.8 0.2 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 gi|14520563|ref|NP_126038.1| - 1.6e-07 31.6 0.0 1.7e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 gi|14520563|ref|NP_126038.1| - 2e-07 31.1 0.1 2.2e-07 31.0 0.1 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-T_C PF15511.6 gi|14520563|ref|NP_126038.1| - 5.5e-07 29.7 0.1 5.6e-07 29.7 0.1 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 gi|14520563|ref|NP_126038.1| - 1.4e-06 28.4 0.3 1.5e-06 28.3 0.3 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) Bromo_TP PF07524.13 gi|14520563|ref|NP_126038.1| - 4.1e-06 26.7 0.0 4.5e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID-18kDa PF02269.16 gi|14520563|ref|NP_126038.1| - 2.2e-05 24.4 0.1 2.4e-05 24.3 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit TFIID_20kDa PF03847.13 gi|14520563|ref|NP_126038.1| - 3.6e-05 24.2 0.1 4e-05 24.0 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A PE PF00934.20 gi|14520563|ref|NP_126038.1| - 0.0083 16.4 0.2 0.0098 16.2 0.2 1.1 1 0 0 1 1 1 1 PE family CENP-X PF09415.10 gi|14520563|ref|NP_126038.1| - 0.011 16.0 1.6 0.013 15.8 1.6 1.1 1 0 0 1 1 1 0 CENP-S associating Centromere protein X DUF1931 PF09123.11 gi|14520563|ref|NP_126038.1| - 0.04 14.0 0.5 0.048 13.8 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1931) Bromo_TP_like PF17027.5 gi|14520563|ref|NP_126038.1| - 0.081 13.1 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Histone-fold protein PCP_red PF08369.10 gi|14520563|ref|NP_126038.1| - 0.17 12.1 2.8 0.53 10.5 0.5 2.4 1 1 1 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit GCHY-1 PF02649.14 gi|14520564|ref|NP_126039.1| - 7.6e-69 232.1 3.4 9.4e-69 231.8 3.4 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 EnY2 PF10163.9 gi|14520564|ref|NP_126039.1| - 0.041 14.2 0.3 5.6 7.4 0.0 2.8 3 0 0 3 3 3 0 Transcription factor e(y)2 ATP-cone PF03477.16 gi|14520564|ref|NP_126039.1| - 0.35 11.5 3.8 67 4.2 0.3 3.3 2 1 0 3 3 3 0 ATP cone domain Peptidase_M54 PF07998.11 gi|14520565|ref|NP_126040.1| - 1.4e-105 351.5 0.1 1.8e-105 351.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M54 Metallopep PF12044.8 gi|14520565|ref|NP_126040.1| - 0.0026 16.4 0.1 0.0038 15.9 0.1 1.1 1 0 0 1 1 1 1 Putative peptidase family Reprolysin_5 PF13688.6 gi|14520565|ref|NP_126040.1| - 0.031 14.4 0.0 0.086 13.0 0.0 1.5 1 1 0 1 1 1 0 Metallo-peptidase family M12 Peptidase_M10 PF00413.24 gi|14520565|ref|NP_126040.1| - 0.048 13.5 0.0 0.074 12.9 0.0 1.2 1 0 0 1 1 1 0 Matrixin Peptidase_M66 PF10462.9 gi|14520565|ref|NP_126040.1| - 0.16 10.9 0.1 0.24 10.3 0.1 1.2 1 0 0 1 1 1 0 Peptidase M66 DUF998 PF06197.13 gi|33356680|ref|NP_126041.2| - 3.4e-08 33.3 12.2 1.5e-07 31.2 12.2 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF998) ThiI PF02568.14 gi|14520567|ref|NP_126042.1| - 3.4e-55 186.7 0.0 4.1e-55 186.4 0.0 1.0 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|14520567|ref|NP_126042.1| - 1.7e-10 40.8 0.1 2e-09 37.2 0.1 2.4 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|14520567|ref|NP_126042.1| - 6.1e-05 22.0 0.1 0.0005 19.0 0.0 2.0 1 1 1 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|14520567|ref|NP_126042.1| - 0.0036 17.1 0.0 0.0056 16.4 0.0 1.2 1 0 0 1 1 1 1 PP-loop family PH_RBD PF12068.8 gi|14520567|ref|NP_126042.1| - 0.089 12.3 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) Fanconi_A PF03511.14 gi|33356681|ref|NP_126043.2| - 0.059 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Fanconi anaemia group A protein DUF3040 PF11239.8 gi|33356681|ref|NP_126043.2| - 0.34 11.2 6.0 1.7 8.9 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) DUF3464 PF11947.8 gi|33356681|ref|NP_126043.2| - 6.7 6.4 5.5 4.5 7.0 4.1 1.4 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 ATP-grasp_5 PF13549.6 gi|14520569|ref|NP_126044.1| - 7e-82 274.2 0.7 8e-82 274.0 0.7 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|14520569|ref|NP_126044.1| - 2.6e-06 27.2 0.4 4.8e-06 26.3 0.4 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|14520569|ref|NP_126044.1| - 0.00074 19.1 0.0 0.0012 18.4 0.0 1.5 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|14520569|ref|NP_126044.1| - 0.095 12.3 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|14520570|ref|NP_126045.1| - 8.9e-59 197.2 4.2 7.6e-57 191.0 0.4 2.9 4 0 0 4 4 4 2 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|14520570|ref|NP_126045.1| - 8.6e-29 100.4 0.1 2.2e-26 92.6 0.0 3.2 3 0 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|14520570|ref|NP_126045.1| - 4.5e-14 52.9 0.6 4.5e-14 52.9 0.6 2.2 2 0 0 2 2 2 1 CoA binding domain NAD_Gly3P_dh_N PF01210.23 gi|14520570|ref|NP_126045.1| - 0.0058 16.6 0.0 0.014 15.4 0.0 1.6 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Asparaginase_C PF17763.1 gi|14520570|ref|NP_126045.1| - 0.0086 16.3 0.5 0.16 12.2 0.1 3.0 4 0 0 4 4 4 1 Glutaminase/Asparaginase C-terminal domain Ligase_CoA PF00549.19 gi|14520570|ref|NP_126045.1| - 0.01 15.7 0.1 0.043 13.6 0.0 2.0 3 0 0 3 3 3 0 CoA-ligase GFO_IDH_MocA PF01408.22 gi|14520570|ref|NP_126045.1| - 0.031 15.1 0.1 0.13 13.1 0.0 2.1 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.24 gi|14520570|ref|NP_126045.1| - 0.049 14.1 0.4 8 6.9 0.1 3.8 3 2 0 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain B12-binding PF02310.19 gi|14520570|ref|NP_126045.1| - 0.074 13.1 0.3 1.5 8.9 0.0 3.0 2 2 1 3 3 3 0 B12 binding domain F420_oxidored PF03807.17 gi|14520570|ref|NP_126045.1| - 0.27 11.8 3.9 0.45 11.1 0.1 3.3 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent Radical_SAM PF04055.21 gi|14520570|ref|NP_126045.1| - 0.46 10.8 1.3 10 6.4 0.1 3.0 3 1 1 4 4 4 0 Radical SAM superfamily CTP_synth_N PF06418.14 gi|14520571|ref|NP_126046.1| - 1.1e-126 421.5 0.3 1.5e-126 421.1 0.3 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|14520571|ref|NP_126046.1| - 5e-59 199.3 0.0 1.3e-58 197.9 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|14520571|ref|NP_126046.1| - 7.5e-07 29.1 0.0 1.5e-05 24.9 0.0 2.6 1 1 1 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|14520571|ref|NP_126046.1| - 0.065 13.3 0.0 0.11 12.5 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TcpE PF12648.7 gi|14520573|ref|NP_126048.1| - 0.35 11.4 9.2 0.27 11.8 7.3 1.8 1 1 1 2 2 2 0 TcpE family SMC_ScpA PF02616.14 gi|14520574|ref|NP_126049.1| - 7.2e-16 58.8 10.2 6.5e-12 45.9 9.0 2.0 1 1 1 2 2 2 2 Segregation and condensation protein ScpA Rad21_Rec8 PF04824.16 gi|14520574|ref|NP_126049.1| - 0.00095 18.4 0.0 0.002 17.4 0.0 1.5 1 0 0 1 1 1 1 Conserved region of Rad21 / Rec8 like protein DUF4470 PF14737.6 gi|14520574|ref|NP_126049.1| - 0.014 15.6 0.1 0.88 9.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4470) Pep_deformylase PF01327.21 gi|14520574|ref|NP_126049.1| - 0.024 14.2 0.2 0.034 13.7 0.2 1.1 1 0 0 1 1 1 0 Polypeptide deformylase CNDH2_C PF16858.5 gi|14520574|ref|NP_126049.1| - 0.042 13.7 0.2 0.2 11.5 0.0 2.0 1 1 1 2 2 2 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term TFIIS_M PF07500.14 gi|14520574|ref|NP_126049.1| - 1.2 9.7 6.7 6 7.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS), central domain SMC_N PF02463.19 gi|14520575|ref|NP_126050.1| - 4.6e-69 232.2 49.4 3.4e-68 229.4 49.4 2.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|14520575|ref|NP_126050.1| - 1.4e-33 115.6 0.2 1.4e-33 115.6 0.2 2.7 3 0 0 3 3 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 gi|14520575|ref|NP_126050.1| - 1.5e-12 47.9 5.1 9.7e-08 32.2 3.0 5.2 4 2 2 6 6 3 2 AAA domain, putative AbiEii toxin, Type IV TA system CENP-F_leu_zip PF10473.9 gi|14520575|ref|NP_126050.1| - 1.3e-07 31.7 61.8 1.6e-05 25.0 22.5 8.1 3 3 4 7 7 5 3 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_15 PF13175.6 gi|14520575|ref|NP_126050.1| - 7.3e-07 29.2 27.1 7.3e-07 29.2 27.1 5.5 2 2 2 4 4 2 1 AAA ATPase domain Baculo_PEP_C PF04513.12 gi|14520575|ref|NP_126050.1| - 1.7e-06 28.1 26.6 0.0049 16.9 0.2 7.4 2 2 3 7 7 7 3 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 gi|14520575|ref|NP_126050.1| - 2.6e-06 28.0 158.5 0.007 16.9 20.2 9.6 2 2 6 8 8 8 3 Apg6 coiled-coil region DUF3584 PF12128.8 gi|14520575|ref|NP_126050.1| - 3.1e-06 25.0 93.4 5.2e-06 24.3 23.3 3.7 4 0 0 4 4 4 2 Protein of unknown function (DUF3584) AAA_23 PF13476.6 gi|14520575|ref|NP_126050.1| - 4.1e-06 27.4 147.7 0.012 16.1 68.4 8.5 2 2 1 3 3 1 1 AAA domain DUF3450 PF11932.8 gi|14520575|ref|NP_126050.1| - 8.8e-06 25.2 89.0 0.0021 17.4 9.4 9.2 3 3 6 9 9 9 4 Protein of unknown function (DUF3450) AAA_29 PF13555.6 gi|14520575|ref|NP_126050.1| - 9.3e-06 25.3 0.1 2.1e-05 24.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain GAS PF13851.6 gi|14520575|ref|NP_126050.1| - 1.1e-05 24.9 138.9 0.002 17.5 16.5 7.6 2 2 4 7 7 6 4 Growth-arrest specific micro-tubule binding DUF724 PF05266.14 gi|14520575|ref|NP_126050.1| - 1.4e-05 25.1 11.4 1.4e-05 25.1 11.4 8.2 4 1 5 9 9 8 3 Protein of unknown function (DUF724) ABC_tran_CTD PF16326.5 gi|14520575|ref|NP_126050.1| - 2e-05 24.7 3.9 2e-05 24.7 3.9 12.9 4 4 9 13 13 10 2 ABC transporter C-terminal domain Spc7 PF08317.11 gi|14520575|ref|NP_126050.1| - 3.2e-05 23.0 145.1 0.011 14.6 23.7 8.0 2 2 6 8 8 8 6 Spc7 kinetochore protein FliJ PF02050.16 gi|14520575|ref|NP_126050.1| - 0.00016 21.8 89.6 0.0066 16.7 15.5 8.9 2 2 5 8 8 8 4 Flagellar FliJ protein EzrA PF06160.12 gi|14520575|ref|NP_126050.1| - 0.00034 18.9 122.9 0.017 13.3 59.6 5.1 2 2 1 3 3 3 2 Septation ring formation regulator, EzrA Tropomyosin_1 PF12718.7 gi|14520575|ref|NP_126050.1| - 0.0007 19.8 24.9 0.0007 19.8 24.9 8.2 2 2 4 7 7 7 1 Tropomyosin like Tektin PF03148.14 gi|14520575|ref|NP_126050.1| - 0.0007 18.5 15.2 0.0007 18.5 15.2 8.0 2 2 5 7 7 7 2 Tektin family MscS_porin PF12795.7 gi|14520575|ref|NP_126050.1| - 0.00081 19.0 84.8 0.0012 18.4 1.1 6.6 3 3 3 6 6 6 2 Mechanosensitive ion channel porin domain ATG16 PF08614.11 gi|14520575|ref|NP_126050.1| - 0.0011 19.2 130.8 0.0027 18.0 26.0 9.2 2 2 7 9 9 9 2 Autophagy protein 16 (ATG16) HAUS-augmin3 PF14932.6 gi|14520575|ref|NP_126050.1| - 0.0012 18.5 12.2 0.0012 18.5 12.2 7.7 2 2 5 8 8 7 1 HAUS augmin-like complex subunit 3 DUF1664 PF07889.12 gi|14520575|ref|NP_126050.1| - 0.0012 18.9 82.2 0.033 14.2 1.7 10.6 2 2 9 11 11 11 4 Protein of unknown function (DUF1664) TACC_C PF05010.14 gi|14520575|ref|NP_126050.1| - 0.0015 18.3 10.3 0.0015 18.3 10.3 7.1 2 2 3 6 6 6 2 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AAA_13 PF13166.6 gi|14520575|ref|NP_126050.1| - 0.0017 17.1 23.9 0.0017 17.1 23.9 6.7 3 2 4 7 7 7 4 AAA domain UPF0242 PF06785.11 gi|14520575|ref|NP_126050.1| - 0.003 17.7 11.8 0.003 17.7 11.8 7.9 2 2 4 6 6 4 1 Uncharacterised protein family (UPF0242) N-terminus NPV_P10 PF05531.12 gi|14520575|ref|NP_126050.1| - 0.0036 17.7 36.4 0.031 14.7 0.2 9.0 5 3 5 10 10 9 3 Nucleopolyhedrovirus P10 protein TMF_TATA_bd PF12325.8 gi|14520575|ref|NP_126050.1| - 0.0038 17.4 8.8 0.0038 17.4 8.8 10.3 2 2 7 10 10 10 3 TATA element modulatory factor 1 TATA binding Atg14 PF10186.9 gi|14520575|ref|NP_126050.1| - 0.0056 15.8 121.2 0.0091 15.1 14.4 6.2 2 2 4 6 6 6 3 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 gi|14520575|ref|NP_126050.1| - 0.0064 15.9 68.2 0.09 12.1 9.8 6.0 2 2 2 4 4 3 3 Domain of unknown function (DUF4407) CCDC-167 PF15188.6 gi|14520575|ref|NP_126050.1| - 0.014 15.7 7.6 0.014 15.7 7.6 11.2 4 2 4 8 8 4 0 Coiled-coil domain-containing protein 167 AAA_27 PF13514.6 gi|14520575|ref|NP_126050.1| - 0.029 14.0 0.1 0.029 14.0 0.1 6.7 5 1 1 7 7 7 0 AAA domain DUF4201 PF13870.6 gi|14520575|ref|NP_126050.1| - 0.03 14.1 130.9 0.044 13.5 12.5 8.3 3 2 4 7 7 6 0 Domain of unknown function (DUF4201) TPR_MLP1_2 PF07926.12 gi|14520575|ref|NP_126050.1| - 0.082 13.0 132.5 0.14 12.3 14.1 9.1 3 2 4 8 8 8 0 TPR/MLP1/MLP2-like protein WXG100 PF06013.12 gi|14520575|ref|NP_126050.1| - 0.83 9.9 14.2 51 4.2 0.1 7.2 5 2 2 7 7 6 0 Proteins of 100 residues with WXG LPP PF04728.13 gi|14520575|ref|NP_126050.1| - 4.3 7.8 22.4 82 3.7 0.0 9.9 8 3 3 11 11 11 0 Lipoprotein leucine-zipper SepF PF04472.12 gi|14520575|ref|NP_126050.1| - 5.3 7.4 6.2 3.5 8.0 0.1 4.0 4 0 0 4 4 2 0 Cell division protein SepF LrgA PF03788.14 gi|14520576|ref|NP_126051.1| - 9.8e-27 92.8 8.6 1.2e-26 92.5 8.6 1.1 1 0 0 1 1 1 1 LrgA family MadM PF03818.13 gi|14520576|ref|NP_126051.1| - 0.0048 16.7 0.3 0.0048 16.7 0.3 2.7 3 0 0 3 3 3 1 Malonate/sodium symporter MadM subunit Pox_A14 PF05767.12 gi|14520576|ref|NP_126051.1| - 0.15 12.2 0.2 0.15 12.2 0.2 2.0 2 1 1 3 3 3 0 Poxvirus virion envelope protein A14 LrgB PF04172.16 gi|14520577|ref|NP_126052.1| - 1.1e-78 263.6 10.0 1.2e-78 263.5 10.0 1.0 1 0 0 1 1 1 1 LrgB-like family DUF485 PF04341.12 gi|14520577|ref|NP_126052.1| - 0.31 11.0 7.0 1.6 8.7 0.1 3.2 2 1 1 3 3 3 0 Protein of unknown function, DUF485 CPBP PF02517.16 gi|14520578|ref|NP_126053.1| - 5.2e-10 39.6 6.3 2.5e-09 37.4 6.3 2.1 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease TIP49 PF06068.13 gi|14520579|ref|NP_126054.1| - 8.2e-141 469.3 1.6 1.1e-140 468.8 1.6 1.2 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 gi|14520579|ref|NP_126054.1| - 2.9e-23 81.8 0.2 1.3e-22 79.7 0.2 2.1 2 0 0 2 2 2 1 TIP49 AAA-lid domain AAA PF00004.29 gi|14520579|ref|NP_126054.1| - 1.9e-11 44.5 0.1 4.3e-07 30.4 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|14520579|ref|NP_126054.1| - 2.8e-08 33.7 0.2 7.8e-05 22.5 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|14520579|ref|NP_126054.1| - 6.7e-06 26.6 0.0 9.3e-05 22.9 0.0 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520579|ref|NP_126054.1| - 9.2e-06 26.0 0.0 0.11 12.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|14520579|ref|NP_126054.1| - 3.4e-05 23.8 0.1 0.0049 16.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 gi|14520579|ref|NP_126054.1| - 0.00053 20.0 0.1 0.05 13.6 0.1 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_7 PF12775.7 gi|14520579|ref|NP_126054.1| - 0.00099 18.7 0.0 0.003 17.1 0.0 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 gi|14520579|ref|NP_126054.1| - 0.001 19.4 0.2 1.4 9.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|14520579|ref|NP_126054.1| - 0.0011 18.4 0.7 0.05 13.0 0.2 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|14520579|ref|NP_126054.1| - 0.0018 18.0 0.2 0.13 12.0 0.1 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain DNA_pol3_delta PF06144.13 gi|14520579|ref|NP_126054.1| - 0.0025 17.6 0.1 0.0075 16.1 0.1 1.7 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_25 PF13481.6 gi|14520579|ref|NP_126054.1| - 0.0064 16.1 0.2 0.019 14.6 0.1 1.9 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|14520579|ref|NP_126054.1| - 0.0068 16.6 0.1 0.021 15.0 0.0 2.0 2 1 0 2 2 1 1 AAA domain ABC_tran PF00005.27 gi|14520579|ref|NP_126054.1| - 0.0071 16.9 0.1 0.016 15.7 0.1 1.7 1 0 0 1 1 1 1 ABC transporter TsaE PF02367.17 gi|14520579|ref|NP_126054.1| - 0.0073 16.3 0.2 0.02 14.9 0.2 1.7 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|14520579|ref|NP_126054.1| - 0.008 15.5 0.1 0.017 14.4 0.1 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_23 PF13476.6 gi|14520579|ref|NP_126054.1| - 0.016 15.8 5.9 0.087 13.3 5.9 2.1 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|14520579|ref|NP_126054.1| - 0.019 15.3 0.0 0.036 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase DEAD PF00270.29 gi|14520579|ref|NP_126054.1| - 0.02 14.7 1.3 0.27 11.0 0.3 2.5 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_17 PF13207.6 gi|14520579|ref|NP_126054.1| - 0.037 14.4 1.5 0.13 12.7 0.1 2.5 3 0 0 3 3 3 0 AAA domain DnaB_C PF03796.15 gi|14520579|ref|NP_126054.1| - 0.038 13.3 0.0 0.1 11.9 0.0 1.7 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|14520579|ref|NP_126054.1| - 0.04 13.6 0.1 0.08 12.7 0.1 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 gi|14520579|ref|NP_126054.1| - 0.041 13.8 0.1 0.085 12.8 0.1 1.5 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 gi|14520579|ref|NP_126054.1| - 0.049 12.7 2.0 0.23 10.5 0.3 2.3 1 1 1 2 2 2 0 Type II/IV secretion system protein Bac_DnaA PF00308.18 gi|14520579|ref|NP_126054.1| - 0.066 13.0 0.3 0.5 10.2 0.1 2.1 2 0 0 2 2 2 0 Bacterial dnaA protein AAA_30 PF13604.6 gi|14520579|ref|NP_126054.1| - 0.11 12.3 0.5 10 5.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|14520579|ref|NP_126054.1| - 0.19 11.5 0.7 0.54 10.0 0.7 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain HMG-CoA_red PF00368.18 gi|14520580|ref|NP_126055.1| - 9.4e-138 459.2 0.4 1.1e-137 459.0 0.4 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase CbiA PF01656.23 gi|14520581|ref|NP_126056.1| - 2e-20 73.2 0.0 6.1e-20 71.6 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|14520581|ref|NP_126056.1| - 5.6e-12 45.9 0.0 8.7e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|14520581|ref|NP_126056.1| - 8.6e-10 38.5 0.0 3e-05 23.6 0.0 2.2 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|14520581|ref|NP_126056.1| - 9e-08 31.9 0.0 1.3e-06 28.1 0.0 2.3 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|14520581|ref|NP_126056.1| - 4.9e-07 29.5 0.1 0.02 14.4 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.6 gi|14520581|ref|NP_126056.1| - 0.0002 21.3 1.3 0.00027 20.8 0.2 1.9 2 1 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|14520581|ref|NP_126056.1| - 0.00077 18.7 1.0 0.0036 16.5 0.2 1.9 1 1 0 2 2 2 1 Anion-transporting ATPase Zeta_toxin PF06414.12 gi|14520581|ref|NP_126056.1| - 0.0061 15.9 0.0 0.014 14.7 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin SRP54 PF00448.22 gi|14520581|ref|NP_126056.1| - 0.0062 16.2 0.1 0.012 15.3 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain APS_kinase PF01583.20 gi|14520581|ref|NP_126056.1| - 0.014 15.3 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase MipZ PF09140.11 gi|14520581|ref|NP_126056.1| - 0.025 13.8 0.1 0.079 12.2 0.1 1.9 1 1 0 1 1 1 0 ATPase MipZ KTI12 PF08433.10 gi|14520581|ref|NP_126056.1| - 0.046 13.2 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_24 PF13479.6 gi|14520581|ref|NP_126056.1| - 0.11 12.2 0.1 0.17 11.6 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|14520581|ref|NP_126056.1| - 0.17 12.2 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|14520581|ref|NP_126056.1| - 0.21 11.3 0.5 0.35 10.6 0.5 1.3 1 0 0 1 1 1 0 AAA domain MatE PF01554.18 gi|14520582|ref|NP_126057.1| - 1.4e-74 249.1 28.2 1.5e-40 138.5 9.4 2.6 3 0 0 3 3 3 2 MatE MurJ PF03023.14 gi|14520582|ref|NP_126057.1| - 1.2e-10 40.6 20.2 2.8e-09 36.1 8.9 2.1 1 1 1 2 2 2 2 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 gi|14520582|ref|NP_126057.1| - 3.1e-08 33.8 4.2 3.1e-08 33.8 4.2 4.6 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Cas1_AcylT PF07779.12 gi|14520582|ref|NP_126057.1| - 0.3 9.9 5.8 0.14 11.1 0.8 2.3 2 1 0 2 2 2 0 10 TM Acyl Transferase domain found in Cas1p HTH_3 PF01381.22 gi|14520583|ref|NP_126058.1| - 4e-13 49.2 0.3 1.8e-12 47.1 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|14520583|ref|NP_126058.1| - 3.9e-09 36.7 0.1 2.3e-08 34.2 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|14520583|ref|NP_126058.1| - 1.8e-08 34.2 0.4 1.9e-07 31.0 0.1 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|14520583|ref|NP_126058.1| - 0.00092 19.0 0.0 0.0025 17.6 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|14520583|ref|NP_126058.1| - 0.00095 19.6 0.1 0.0028 18.1 0.1 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain MerR_1 PF13411.6 gi|14520583|ref|NP_126058.1| - 0.0097 16.0 0.0 0.075 13.1 0.0 2.4 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_8 PF02954.19 gi|14520583|ref|NP_126058.1| - 0.013 15.3 0.3 0.053 13.3 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_17 PF12728.7 gi|14520583|ref|NP_126058.1| - 0.018 15.2 0.8 0.12 12.6 0.0 2.6 3 0 0 3 3 2 0 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|14520583|ref|NP_126058.1| - 0.022 14.8 0.0 0.045 13.9 0.0 1.4 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA GP3_package PF16677.5 gi|14520583|ref|NP_126058.1| - 0.025 14.7 0.0 0.085 13.0 0.0 1.9 2 0 0 2 2 2 0 DNA-packaging protein gp3 HTH_23 PF13384.6 gi|14520583|ref|NP_126058.1| - 0.045 13.5 0.0 0.17 11.7 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.12 gi|14520583|ref|NP_126058.1| - 0.054 13.4 0.1 0.21 11.6 0.1 2.0 1 0 0 1 1 1 0 HTH domain HTH_29 PF13551.6 gi|14520583|ref|NP_126058.1| - 0.089 12.8 0.0 0.28 11.2 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix HTH_10 PF04967.12 gi|14520583|ref|NP_126058.1| - 0.09 12.6 0.0 1.5 8.7 0.0 2.5 2 0 0 2 2 2 0 HTH DNA binding domain HTH_37 PF13744.6 gi|14520583|ref|NP_126058.1| - 0.11 12.4 0.4 1.1 9.3 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|14520583|ref|NP_126058.1| - 0.12 12.5 0.0 0.43 10.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 gi|14520583|ref|NP_126058.1| - 0.14 12.0 0.5 0.38 10.6 0.0 2.0 2 1 0 2 2 1 0 Helix-turn-helix domain adh_short_C2 PF13561.6 gi|14520584|ref|NP_126059.1| - 1.6e-28 99.9 0.0 2.4e-28 99.3 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|14520584|ref|NP_126059.1| - 8.6e-28 97.1 0.0 1.1e-27 96.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|14520584|ref|NP_126059.1| - 0.0003 20.8 0.0 0.00047 20.1 0.0 1.4 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|14520584|ref|NP_126059.1| - 0.0041 16.6 0.0 0.024 14.1 0.0 1.9 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 gi|14520584|ref|NP_126059.1| - 0.0057 17.2 0.0 0.019 15.5 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 gi|14520584|ref|NP_126059.1| - 0.0071 16.3 0.0 0.009 15.9 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Glyco_trans_4_2 PF13477.6 gi|14520584|ref|NP_126059.1| - 0.0074 16.3 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like GDP_Man_Dehyd PF16363.5 gi|14520584|ref|NP_126059.1| - 0.16 11.3 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NmrA PF05368.13 gi|14520584|ref|NP_126059.1| - 0.17 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family MoaC PF01967.21 gi|14520586|ref|NP_126061.1| - 2e-52 176.9 0.2 2.2e-52 176.7 0.2 1.0 1 0 0 1 1 1 1 MoaC family DUF1743 PF08489.11 gi|14520587|ref|NP_126062.1| - 3.7e-34 117.3 0.0 8.9e-34 116.0 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.25 gi|14520587|ref|NP_126062.1| - 2.6e-10 40.1 0.1 5.9e-10 39.0 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 gi|14520587|ref|NP_126062.1| - 1.1e-06 28.7 0.0 2.2e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OrfB_Zn_ribbon PF07282.11 gi|14520587|ref|NP_126062.1| - 0.018 14.9 0.9 0.04 13.9 0.9 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Prok-RING_1 PF14446.6 gi|14520587|ref|NP_126062.1| - 0.021 14.8 0.4 0.035 14.0 0.4 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RNA_POL_M_15KD PF02150.16 gi|14520587|ref|NP_126062.1| - 0.045 13.6 3.6 0.093 12.6 3.6 1.5 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit HIN PF02760.15 gi|14520587|ref|NP_126062.1| - 0.058 13.1 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 HIN-200/IF120x domain TF_Zn_Ribbon PF08271.12 gi|14520587|ref|NP_126062.1| - 0.078 12.5 1.1 0.19 11.3 1.1 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding DZR PF12773.7 gi|14520587|ref|NP_126062.1| - 0.2 11.7 1.1 0.33 11.0 1.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|14520587|ref|NP_126062.1| - 0.53 10.3 5.7 0.99 9.4 5.7 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TrkH PF02386.16 gi|14520588|ref|NP_126063.1| - 5.6e-68 229.6 25.6 8.8e-68 229.0 25.6 1.2 1 0 0 1 1 1 1 Cation transport protein ABC_tran PF00005.27 gi|14520589|ref|NP_126064.1| - 1.5e-28 100.1 0.0 2.7e-28 99.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|14520589|ref|NP_126064.1| - 2.4e-08 33.7 0.0 2.4e-07 30.4 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|14520589|ref|NP_126064.1| - 5.4e-07 29.7 3.3 0.0011 18.9 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|14520589|ref|NP_126064.1| - 0.00019 21.7 0.2 0.0016 18.7 0.2 2.2 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 gi|14520589|ref|NP_126064.1| - 0.0012 18.2 0.3 0.0077 15.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial TniB protein AAA_29 PF13555.6 gi|14520589|ref|NP_126064.1| - 0.0043 16.8 0.1 0.0083 15.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|14520589|ref|NP_126064.1| - 0.021 15.3 2.3 0.37 11.3 0.2 2.5 2 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|14520589|ref|NP_126064.1| - 0.022 14.5 0.1 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|14520589|ref|NP_126064.1| - 0.043 13.6 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_13 PF13166.6 gi|14520589|ref|NP_126064.1| - 0.066 11.8 0.0 6.1 5.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14520589|ref|NP_126064.1| - 0.11 12.9 0.3 0.17 12.3 0.2 1.5 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|14520589|ref|NP_126064.1| - 0.14 12.0 0.1 0.24 11.3 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|14520589|ref|NP_126064.1| - 0.15 12.5 0.0 0.26 11.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 gi|14520589|ref|NP_126064.1| - 0.16 11.6 0.2 5.8 6.6 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|14520589|ref|NP_126064.1| - 0.17 11.2 0.0 0.3 10.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PALP PF00291.25 gi|14520590|ref|NP_126065.1| - 6.8e-45 153.7 0.0 3.7e-44 151.3 0.0 1.8 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CYTH PF01928.21 gi|14520591|ref|NP_126066.1| - 7.6e-35 120.4 8.2 9e-35 120.2 8.2 1.1 1 0 0 1 1 1 1 CYTH domain MATH PF00917.26 gi|14520591|ref|NP_126066.1| - 0.082 13.1 0.3 1.6 8.9 0.3 2.6 1 1 0 1 1 1 0 MATH domain Peptidase_M54 PF07998.11 gi|14520592|ref|NP_126067.1| - 5.4e-28 98.3 0.0 6.3e-28 98.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.24 gi|14520592|ref|NP_126067.1| - 0.00027 20.8 0.2 0.00051 19.9 0.2 1.7 1 1 0 1 1 1 1 Matrixin Metallopep PF12044.8 gi|14520592|ref|NP_126067.1| - 0.0043 15.7 0.3 0.0076 14.9 0.3 1.3 1 0 0 1 1 1 1 Putative peptidase family Reprolysin_3 PF13582.6 gi|14520592|ref|NP_126067.1| - 0.018 15.6 0.1 0.023 15.2 0.1 1.5 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|14520592|ref|NP_126067.1| - 0.058 12.3 0.0 0.1 11.6 0.0 1.3 1 0 0 1 1 1 0 Peptidase M66 Reprolysin_5 PF13688.6 gi|14520592|ref|NP_126067.1| - 0.068 13.3 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Peptidase_M43 PF05572.13 gi|14520592|ref|NP_126067.1| - 0.1 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A DUF4953 PF16313.5 gi|14520592|ref|NP_126067.1| - 0.28 10.3 0.0 0.41 9.8 0.0 1.2 1 0 0 1 1 1 0 Met-zincin PyrI_C PF02748.15 gi|14520592|ref|NP_126067.1| - 4 7.4 5.1 20 5.2 5.1 2.0 1 1 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Peptidase_M42 PF05343.14 gi|14520593|ref|NP_126068.1| - 1.3e-94 316.5 0.0 1.5e-94 316.3 0.0 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|14520593|ref|NP_126068.1| - 2.5e-07 30.6 0.2 7.3e-07 29.1 0.2 1.7 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M18 PF02127.15 gi|14520593|ref|NP_126068.1| - 5.9e-06 25.3 0.0 0.0012 17.8 0.0 2.2 1 1 1 2 2 2 2 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M28 PF04389.17 gi|14520593|ref|NP_126068.1| - 6.5e-05 22.7 0.2 0.33 10.6 0.0 2.4 2 1 0 2 2 2 2 Peptidase family M28 DUF655 PF04919.12 gi|14520594|ref|NP_126069.1| - 1.3e-73 246.8 0.2 1.5e-73 246.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|14520594|ref|NP_126069.1| - 4.7e-05 23.6 0.0 8.5e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|14520594|ref|NP_126069.1| - 0.00028 21.1 0.0 0.00067 19.9 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|14520595|ref|NP_126070.1| - 1.7e-54 184.7 0.5 2.1e-54 184.4 0.5 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|14520595|ref|NP_126070.1| - 7.8e-06 26.5 0.0 1.8e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14520595|ref|NP_126070.1| - 0.00014 22.4 0.0 0.0004 21.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|14520595|ref|NP_126070.1| - 0.001 18.7 0.0 0.0015 18.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|14520595|ref|NP_126070.1| - 0.013 15.4 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain ALS2CR8 PF15299.6 gi|14520595|ref|NP_126070.1| - 0.014 15.3 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 PCMT PF01135.19 gi|14520595|ref|NP_126070.1| - 0.088 12.5 0.0 0.25 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DREV PF05219.12 gi|14520595|ref|NP_126070.1| - 0.1 11.7 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase SpoIIID PF12116.8 gi|14520595|ref|NP_126070.1| - 0.26 11.4 1.6 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Stage III sporulation protein D AdoMet_Synthase PF01941.19 gi|14520596|ref|NP_126071.1| - 3.9e-178 592.2 5.1 4.4e-178 592.1 5.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) S-AdoMet_synt_N PF00438.20 gi|14520596|ref|NP_126071.1| - 0.016 15.9 0.0 0.11 13.2 0.0 2.4 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain Baculo_p48 PF04878.13 gi|14520596|ref|NP_126071.1| - 0.05 12.5 0.0 0.089 11.7 0.0 1.3 1 0 0 1 1 1 0 Baculovirus P48 protein Toprim PF01751.22 gi|14520597|ref|NP_126072.1| - 8.9e-11 41.9 1.1 3.1e-09 37.0 0.1 2.6 2 0 0 2 2 2 1 Toprim domain HAUS-augmin3 PF14932.6 gi|14520597|ref|NP_126072.1| - 8.7e-05 22.2 6.0 0.00016 21.3 6.0 1.4 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 FlgN PF05130.12 gi|14520597|ref|NP_126072.1| - 0.00019 22.0 3.2 0.00044 20.8 3.2 1.7 1 0 0 1 1 1 1 FlgN protein HALZ PF02183.18 gi|14520597|ref|NP_126072.1| - 0.00033 20.8 7.6 0.00033 20.8 7.6 3.1 2 1 1 3 3 3 1 Homeobox associated leucine zipper APG6_N PF17675.1 gi|14520597|ref|NP_126072.1| - 0.00042 20.8 9.5 0.00092 19.7 9.5 1.6 1 0 0 1 1 1 1 Apg6 coiled-coil region YabA PF06156.13 gi|14520597|ref|NP_126072.1| - 0.00075 20.1 2.8 0.00075 20.1 2.8 2.1 2 0 0 2 2 2 1 Initiation control protein YabA FapA PF03961.13 gi|14520597|ref|NP_126072.1| - 0.0012 17.6 2.0 0.0016 17.2 2.0 1.3 1 0 0 1 1 1 1 Flagellar Assembly Protein A Fez1 PF06818.15 gi|14520597|ref|NP_126072.1| - 0.0014 19.1 5.3 0.002 18.6 5.3 1.4 1 0 0 1 1 1 1 Fez1 SHE3 PF17078.5 gi|14520597|ref|NP_126072.1| - 0.0018 18.1 5.4 0.003 17.3 5.4 1.4 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Toprim_2 PF13155.6 gi|14520597|ref|NP_126072.1| - 0.004 17.5 0.0 0.011 16.1 0.0 1.8 1 0 0 1 1 1 1 Toprim-like DUF812 PF05667.11 gi|14520597|ref|NP_126072.1| - 0.0046 15.9 2.9 0.0057 15.6 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Spc7 PF08317.11 gi|14520597|ref|NP_126072.1| - 0.006 15.5 9.8 0.0093 14.9 9.8 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF4047 PF13256.6 gi|14520597|ref|NP_126072.1| - 0.018 15.2 1.1 0.018 15.2 1.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) GrpE PF01025.19 gi|14520597|ref|NP_126072.1| - 0.023 14.4 8.7 0.078 12.6 4.1 2.9 3 0 0 3 3 3 0 GrpE Seryl_tRNA_N PF02403.22 gi|14520597|ref|NP_126072.1| - 0.032 14.5 8.4 0.063 13.5 7.6 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Toprim_4 PF13662.6 gi|14520597|ref|NP_126072.1| - 0.043 14.3 0.3 0.41 11.1 0.3 2.6 1 1 0 1 1 1 0 Toprim domain DUF3450 PF11932.8 gi|14520597|ref|NP_126072.1| - 0.043 13.1 2.5 0.075 12.3 2.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 gi|14520597|ref|NP_126072.1| - 0.043 13.0 0.8 0.065 12.5 0.8 1.2 1 0 0 1 1 1 0 TMPIT-like protein AAA_23 PF13476.6 gi|14520597|ref|NP_126072.1| - 0.05 14.1 7.3 0.056 13.9 2.8 2.1 2 0 0 2 2 2 0 AAA domain Laminin_II PF06009.12 gi|14520597|ref|NP_126072.1| - 0.057 13.4 0.8 0.13 12.3 0.3 1.8 2 0 0 2 2 2 0 Laminin Domain II PHM7_cyt PF14703.6 gi|14520597|ref|NP_126072.1| - 0.073 13.3 2.3 0.13 12.5 2.3 1.4 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter H2TH PF06831.14 gi|14520597|ref|NP_126072.1| - 0.092 12.7 0.0 0.28 11.2 0.0 1.8 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain DUF4795 PF16043.5 gi|14520597|ref|NP_126072.1| - 0.097 12.3 8.4 0.17 11.5 7.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Occludin_ELL PF07303.13 gi|14520597|ref|NP_126072.1| - 0.11 13.2 6.2 0.27 12.0 6.2 1.6 1 0 0 1 1 1 0 Occludin homology domain TFIIE_beta PF02186.15 gi|14520597|ref|NP_126072.1| - 0.19 12.1 3.3 0.35 11.2 2.1 2.1 1 1 0 1 1 1 0 TFIIE beta subunit core domain GAS PF13851.6 gi|14520597|ref|NP_126072.1| - 0.29 10.5 13.2 0.26 10.6 11.1 1.9 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding GIT_CC PF16559.5 gi|14520597|ref|NP_126072.1| - 0.45 10.4 6.8 0.58 10.1 5.1 2.1 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor CENP-H PF05837.12 gi|14520597|ref|NP_126072.1| - 0.78 10.2 5.4 2.9 8.3 3.3 2.7 2 1 0 3 3 3 0 Centromere protein H (CENP-H) SKA2 PF16740.5 gi|14520597|ref|NP_126072.1| - 0.89 9.4 6.7 11 5.9 6.5 2.6 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 bZIP_2 PF07716.15 gi|14520597|ref|NP_126072.1| - 0.9 9.7 14.6 3.1 7.9 2.5 2.9 1 1 1 2 2 2 0 Basic region leucine zipper DivIC PF04977.15 gi|14520597|ref|NP_126072.1| - 1.1 9.0 7.6 0.87 9.4 2.1 2.3 1 1 1 2 2 2 0 Septum formation initiator Atg14 PF10186.9 gi|14520597|ref|NP_126072.1| - 1.9 7.5 4.3 2.8 7.0 4.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4250 PF14056.6 gi|14520597|ref|NP_126072.1| - 2.7 8.0 9.3 0.38 10.8 3.2 2.8 2 1 2 4 4 3 0 Domain of unknown function (DUF4250) DUF1664 PF07889.12 gi|14520597|ref|NP_126072.1| - 2.9 8.0 4.9 2.2 8.4 1.8 2.3 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) Cep57_MT_bd PF06657.13 gi|14520597|ref|NP_126072.1| - 5.1 7.6 11.0 15 6.1 7.5 3.0 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ZapB PF06005.12 gi|14520597|ref|NP_126072.1| - 6.1 7.4 15.7 3.8 8.0 12.3 2.5 2 1 0 2 2 1 0 Cell division protein ZapB Spc24 PF08286.11 gi|14520597|ref|NP_126072.1| - 6.2 7.1 9.7 20 5.4 8.7 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 bZIP_1 PF00170.21 gi|14520597|ref|NP_126072.1| - 7.7 6.7 13.9 5.3 7.2 6.7 2.7 1 1 1 2 2 2 0 bZIP transcription factor Phage_integrase PF00589.22 gi|14520598|ref|NP_126073.1| - 2.1e-53 180.7 0.0 3.5e-53 179.9 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 gi|14520598|ref|NP_126073.1| - 8.3e-08 32.4 1.9 5.9e-07 29.7 1.9 2.5 1 1 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 gi|14520598|ref|NP_126073.1| - 2.4e-07 31.1 1.9 1.6e-06 28.5 0.3 2.7 3 1 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_integr_3 PF16795.5 gi|14520598|ref|NP_126073.1| - 0.00079 19.4 0.8 0.083 12.8 0.1 2.5 2 0 0 2 2 2 1 Archaeal phage integrase Integrase_1 PF12835.7 gi|14520598|ref|NP_126073.1| - 0.002 18.2 0.0 0.0047 17.0 0.0 1.7 1 0 0 1 1 1 1 Integrase HTH_23 PF13384.6 gi|14520598|ref|NP_126073.1| - 0.15 11.9 1.6 3.3 7.6 0.0 3.7 3 1 1 4 4 4 0 Homeodomain-like domain HTH_17 PF12728.7 gi|14520598|ref|NP_126073.1| - 0.22 11.7 1.9 27 5.0 0.0 3.9 4 0 0 4 4 4 0 Helix-turn-helix domain GHMP_kinases_N PF00288.26 gi|33356682|ref|NP_126074.2| - 3.1e-05 24.1 0.3 6.6e-05 23.1 0.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain baeRF_family10 PF18854.1 gi|33356682|ref|NP_126074.2| - 0.019 15.2 0.0 0.035 14.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 10 Amino_oxidase PF01593.24 gi|33356682|ref|NP_126074.2| - 0.029 13.7 0.0 0.046 13.0 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase TRM PF02005.16 gi|14520600|ref|NP_126075.1| - 3.5e-126 421.4 0.0 4.2e-126 421.1 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_16 PF10294.9 gi|14520600|ref|NP_126075.1| - 0.0018 18.0 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Met_10 PF02475.16 gi|14520600|ref|NP_126075.1| - 0.003 17.3 0.0 0.0057 16.4 0.0 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Ribosomal_L35Ae PF01247.18 gi|14520601|ref|NP_126076.1| - 1.8e-22 79.3 0.1 2.5e-22 78.8 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 gi|14520601|ref|NP_126076.1| - 4.2e-05 23.7 0.4 0.18 12.1 0.2 2.1 2 0 0 2 2 2 2 RimM N-terminal domain Gp_dh_C PF02800.20 gi|14520602|ref|NP_126077.1| - 1.2e-32 112.7 0.2 1.7e-32 112.2 0.2 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|14520602|ref|NP_126077.1| - 4.7e-18 65.5 1.1 2.9e-17 62.9 0.5 2.2 1 1 1 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|14520602|ref|NP_126077.1| - 7.1e-06 26.3 0.6 3.7e-05 24.0 0.0 2.5 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|14520602|ref|NP_126077.1| - 0.00049 20.7 0.1 0.049 14.3 0.0 2.9 2 1 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|14520602|ref|NP_126077.1| - 0.00051 20.8 0.0 0.0013 19.6 0.0 1.8 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|14520602|ref|NP_126077.1| - 0.00052 19.4 0.3 0.22 10.9 0.2 2.5 1 1 1 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|14520602|ref|NP_126077.1| - 0.026 15.0 0.1 0.065 13.7 0.1 1.7 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|14520602|ref|NP_126077.1| - 0.053 13.8 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CoA_binding PF02629.19 gi|14520602|ref|NP_126077.1| - 0.073 13.8 0.3 0.22 12.2 0.2 2.0 1 1 1 2 2 2 0 CoA binding domain DUF1884 PF08967.10 gi|14520603|ref|NP_126078.1| - 8.9e-26 90.0 0.6 8.9e-26 90.0 0.6 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF1884) Glyco_trans_4_3 PF12000.8 gi|14520603|ref|NP_126078.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 4 group Exog_C PF18026.1 gi|14520603|ref|NP_126078.1| - 0.76 9.9 3.4 1.4 9.1 0.0 2.5 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain ECF-ribofla_trS PF07155.12 gi|14520604|ref|NP_126079.1| - 1.8e-33 115.9 17.5 1.8e-33 115.9 17.5 1.4 2 0 0 2 2 2 1 ECF-type riboflavin transporter, S component ECF_trnsprt PF12822.7 gi|14520604|ref|NP_126079.1| - 4.6e-09 36.6 18.5 4.6e-09 36.6 18.5 2.1 1 1 1 2 2 2 1 ECF transporter, substrate-specific component ATPase_gene1 PF09527.10 gi|14520604|ref|NP_126079.1| - 0.024 14.8 0.1 0.024 14.8 0.1 4.3 4 1 0 4 4 4 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF2232 PF09991.9 gi|14520604|ref|NP_126079.1| - 0.17 11.0 19.1 0.15 11.2 9.4 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2232) 7TM-7TMR_HD PF07698.11 gi|14520604|ref|NP_126079.1| - 0.26 11.0 13.4 0.35 10.6 13.4 1.3 1 1 0 1 1 1 0 7TM receptor with intracellular HD hydrolase AIRS PF00586.24 gi|14520605|ref|NP_126080.1| - 1.6e-17 63.9 0.1 2.9e-17 63.1 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|14520605|ref|NP_126080.1| - 1.5e-08 34.9 0.0 3e-08 33.9 0.0 1.4 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain DNA_binding_1 PF01035.20 gi|14520606|ref|NP_126081.1| - 1.2e-18 67.0 0.0 1.6e-18 66.6 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain DUF1938 PF09153.10 gi|14520606|ref|NP_126081.1| - 2.1e-18 66.2 0.2 4.1e-18 65.3 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1938) TPR_2 PF07719.17 gi|14520607|ref|NP_126082.1| - 4.6e-12 45.1 48.5 0.00095 19.1 1.4 8.0 5 3 3 8 8 8 5 Tetratricopeptide repeat TPR_15 PF13429.6 gi|14520607|ref|NP_126082.1| - 4.5e-09 35.9 20.2 1.8e-07 30.6 7.5 3.5 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|14520607|ref|NP_126082.1| - 5.3e-09 36.2 33.9 0.035 14.7 1.5 7.2 4 2 3 7 7 7 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|14520607|ref|NP_126082.1| - 6.1e-07 29.0 36.8 0.034 14.0 0.7 7.1 5 2 3 8 8 8 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|14520607|ref|NP_126082.1| - 2.2e-06 27.3 30.8 0.0049 16.8 1.3 7.4 5 2 2 7 7 7 3 Tetratricopeptide repeat SNAP PF14938.6 gi|14520607|ref|NP_126082.1| - 3.6e-06 26.6 25.0 3.6e-06 26.6 25.0 2.4 1 1 1 2 2 2 1 Soluble NSF attachment protein, SNAP TPR_8 PF13181.6 gi|14520607|ref|NP_126082.1| - 5.7e-06 26.1 43.5 0.029 14.6 0.6 7.3 5 1 1 7 7 7 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|14520607|ref|NP_126082.1| - 9.2e-05 22.7 28.5 0.012 15.9 1.6 5.1 2 2 2 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 gi|14520607|ref|NP_126082.1| - 0.00022 21.8 25.5 0.53 11.2 1.0 6.2 1 1 5 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|14520607|ref|NP_126082.1| - 0.00048 20.6 21.0 0.12 12.9 5.8 3.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|14520607|ref|NP_126082.1| - 0.00068 20.2 27.9 0.6 10.8 7.0 5.6 2 2 2 4 4 4 2 Tetratricopeptide repeat DUF4018 PF13210.6 gi|14520607|ref|NP_126082.1| - 0.00084 19.2 6.6 0.00084 19.2 6.6 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4018) Clathrin PF00637.20 gi|14520607|ref|NP_126082.1| - 0.0083 16.0 1.1 0.0083 16.0 1.1 3.8 1 1 1 3 3 3 1 Region in Clathrin and VPS TPR_9 PF13371.6 gi|14520607|ref|NP_126082.1| - 0.015 15.4 9.3 6.6 7.0 0.1 5.2 3 3 2 6 6 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 gi|14520607|ref|NP_126082.1| - 1.2 9.9 5.6 13 6.8 0.1 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF883 PF05957.13 gi|14520607|ref|NP_126082.1| - 7.1 7.3 7.3 12 6.6 0.5 3.2 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) RC-P840_PscD PF10657.9 gi|14520608|ref|NP_126083.1| - 0.027 14.6 0.3 0.089 12.9 0.3 1.8 1 1 0 1 1 1 0 Photosystem P840 reaction centre protein PscD PIN_5 PF08745.11 gi|33356684|ref|NP_126084.2| - 4.2e-67 225.6 0.5 4.8e-67 225.4 0.5 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease ALC PF17527.2 gi|33356684|ref|NP_126084.2| - 0.017 14.7 0.1 0.039 13.6 0.1 1.6 1 1 0 1 1 1 0 Phage ALC protein Alba PF01918.21 gi|14520610|ref|NP_126085.1| - 4.4e-22 77.7 0.9 5.6e-22 77.3 0.9 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 gi|14520610|ref|NP_126085.1| - 0.0023 17.9 0.2 0.0035 17.3 0.2 1.4 1 1 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P AAA PF00004.29 gi|14520611|ref|NP_126086.1| - 2.4e-103 341.9 0.1 2e-51 173.9 0.0 2.9 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 gi|14520611|ref|NP_126086.1| - 1.7e-37 127.5 0.0 1.7e-36 124.3 0.2 2.6 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 gi|14520611|ref|NP_126086.1| - 2e-33 113.9 5.2 1.2e-19 69.8 0.5 3.0 2 0 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 gi|14520611|ref|NP_126086.1| - 1.4e-16 61.1 0.0 2e-08 34.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|14520611|ref|NP_126086.1| - 2e-16 60.2 0.0 5.8e-07 29.4 0.0 3.2 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|14520611|ref|NP_126086.1| - 4.1e-16 59.8 0.8 8.7e-07 29.5 0.0 4.2 3 1 0 4 4 4 2 AAA ATPase domain CDC48_2 PF02933.17 gi|14520611|ref|NP_126086.1| - 7.3e-15 54.5 0.5 1.1e-13 50.7 0.2 2.6 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_22 PF13401.6 gi|14520611|ref|NP_126086.1| - 4.4e-13 49.7 0.7 0.0011 19.2 0.0 5.0 2 2 1 3 3 3 2 AAA domain AAA_5 PF07728.14 gi|14520611|ref|NP_126086.1| - 4.9e-13 49.3 0.9 3.5e-05 23.8 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|14520611|ref|NP_126086.1| - 7.4e-12 45.6 0.0 0.00014 22.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|14520611|ref|NP_126086.1| - 1.8e-11 44.2 0.0 0.00011 22.2 0.0 2.7 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.13 gi|14520611|ref|NP_126086.1| - 1.5e-10 40.8 1.3 0.00051 19.4 0.0 3.3 3 1 0 3 3 3 2 TIP49 P-loop domain Vps4_C PF09336.10 gi|14520611|ref|NP_126086.1| - 2e-08 34.1 0.8 0.00035 20.5 0.0 3.0 3 0 0 3 3 2 2 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|14520611|ref|NP_126086.1| - 2.4e-08 34.6 0.0 0.015 15.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain IstB_IS21 PF01695.17 gi|14520611|ref|NP_126086.1| - 2.4e-08 33.9 0.0 0.011 15.5 0.0 2.7 2 0 0 2 2 2 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|14520611|ref|NP_126086.1| - 6.1e-08 32.6 0.2 0.068 12.9 0.0 3.8 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_24 PF13479.6 gi|14520611|ref|NP_126086.1| - 1e-07 31.9 0.0 0.0089 15.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|14520611|ref|NP_126086.1| - 2.5e-07 31.0 0.0 0.027 14.8 0.0 2.7 2 0 0 2 2 2 2 RNA helicase Mg_chelatase PF01078.21 gi|14520611|ref|NP_126086.1| - 4.6e-07 29.4 0.2 0.033 13.6 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|14520611|ref|NP_126086.1| - 6.9e-07 29.7 0.0 0.031 14.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|14520611|ref|NP_126086.1| - 1.1e-06 28.4 6.3 1.1 8.7 0.1 4.4 4 0 0 4 4 4 3 AAA domain ATPase_2 PF01637.18 gi|14520611|ref|NP_126086.1| - 1.6e-06 28.2 1.5 0.0089 16.0 0.0 3.7 3 1 0 3 3 3 2 ATPase domain predominantly from Archaea Bac_DnaA PF00308.18 gi|14520611|ref|NP_126086.1| - 2.4e-06 27.6 0.0 0.082 12.7 0.0 3.2 2 1 2 4 4 3 2 Bacterial dnaA protein DUF815 PF05673.13 gi|14520611|ref|NP_126086.1| - 3.9e-06 26.2 0.0 0.041 13.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|14520611|ref|NP_126086.1| - 6.9e-06 26.1 0.1 1.1 9.1 0.0 4.1 3 1 1 4 4 4 2 NACHT domain AAA_7 PF12775.7 gi|14520611|ref|NP_126086.1| - 1.5e-05 24.6 0.0 0.11 12.0 0.0 2.7 2 1 0 2 2 2 2 P-loop containing dynein motor region TsaE PF02367.17 gi|14520611|ref|NP_126086.1| - 1.8e-05 24.8 0.0 0.26 11.3 0.0 2.7 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|14520611|ref|NP_126086.1| - 1.9e-05 25.2 0.0 0.19 12.2 0.0 2.7 2 0 0 2 2 2 2 ABC transporter Zeta_toxin PF06414.12 gi|14520611|ref|NP_126086.1| - 2.3e-05 23.8 0.4 0.23 10.7 0.0 3.1 3 0 0 3 3 3 2 Zeta toxin PhoH PF02562.16 gi|14520611|ref|NP_126086.1| - 5e-05 22.8 0.6 0.36 10.2 0.1 2.6 2 0 0 2 2 2 2 PhoH-like protein Parvo_NS1 PF01057.17 gi|14520611|ref|NP_126086.1| - 6.1e-05 22.2 0.2 0.25 10.4 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|14520611|ref|NP_126086.1| - 0.00014 21.3 0.0 0.24 10.6 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_3 PF07726.11 gi|14520611|ref|NP_126086.1| - 0.00016 21.6 0.0 0.74 9.7 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 gi|14520611|ref|NP_126086.1| - 0.00019 20.9 8.3 0.25 10.7 0.1 4.4 3 2 1 4 4 4 2 KaiC AAA_11 PF13086.6 gi|14520611|ref|NP_126086.1| - 0.00042 20.2 0.0 0.88 9.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|14520611|ref|NP_126086.1| - 0.0006 19.1 0.0 0.98 8.6 0.0 2.7 2 0 0 2 2 2 2 NB-ARC domain AAA_17 PF13207.6 gi|14520611|ref|NP_126086.1| - 0.0011 19.4 0.4 3.6 8.0 0.0 3.6 3 1 0 3 3 2 0 AAA domain AAA_19 PF13245.6 gi|14520611|ref|NP_126086.1| - 0.0023 18.3 4.4 1.5 9.1 0.1 3.6 3 2 1 4 4 3 1 AAA domain TniB PF05621.11 gi|14520611|ref|NP_126086.1| - 0.0027 17.1 0.2 17 4.7 0.0 4.2 4 1 1 5 5 4 0 Bacterial TniB protein AAA_30 PF13604.6 gi|14520611|ref|NP_126086.1| - 0.0046 16.7 4.2 1.1 8.9 0.1 3.3 3 2 0 3 3 2 2 AAA domain NTPase_1 PF03266.15 gi|14520611|ref|NP_126086.1| - 0.0058 16.6 5.0 12 5.8 0.0 5.1 3 2 2 5 5 5 0 NTPase Zot PF05707.12 gi|14520611|ref|NP_126086.1| - 0.0061 16.2 0.0 1 8.9 0.0 3.0 2 1 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_10 PF12846.7 gi|14520611|ref|NP_126086.1| - 0.0064 15.5 0.4 0.12 11.3 0.2 2.7 3 0 0 3 3 3 1 AAA-like domain Sigma54_activ_2 PF14532.6 gi|14520611|ref|NP_126086.1| - 0.01 16.0 0.0 5.5 7.1 0.0 2.7 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF5446 PF17522.2 gi|14520611|ref|NP_126086.1| - 0.023 14.8 2.3 0.023 14.8 2.3 2.3 2 0 0 2 2 1 0 Family of unknown function (DUF5446) DUF1905 PF08922.11 gi|14520611|ref|NP_126086.1| - 0.024 14.7 0.2 3.7 7.7 0.0 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1905) ResIII PF04851.15 gi|14520611|ref|NP_126086.1| - 0.025 14.6 0.0 11 5.9 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Viral_helicase1 PF01443.18 gi|14520611|ref|NP_126086.1| - 0.025 14.3 0.0 0.98 9.1 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase cobW PF02492.19 gi|14520611|ref|NP_126086.1| - 0.03 13.9 0.0 11 5.5 0.0 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP-cone PF03477.16 gi|14520611|ref|NP_126086.1| - 0.03 14.9 0.9 0.53 10.9 0.3 3.3 2 0 0 2 2 2 0 ATP cone domain Cytidylate_kin PF02224.18 gi|14520611|ref|NP_126086.1| - 0.031 14.0 0.0 9.8 5.8 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase AFG1_ATPase PF03969.16 gi|14520611|ref|NP_126086.1| - 0.038 12.9 0.0 6.7 5.5 0.0 2.4 2 0 0 2 2 2 0 AFG1-like ATPase T2SSE PF00437.20 gi|14520611|ref|NP_126086.1| - 0.041 12.9 0.1 9.2 5.2 0.0 2.7 2 1 0 2 2 2 0 Type II/IV secretion system protein DAP3 PF10236.9 gi|14520611|ref|NP_126086.1| - 0.063 12.4 0.0 17 4.4 0.0 3.1 3 0 0 3 3 3 0 Mitochondrial ribosomal death-associated protein 3 SKI PF01202.22 gi|14520611|ref|NP_126086.1| - 0.082 13.0 0.4 22 5.1 0.0 3.2 3 0 0 3 3 2 0 Shikimate kinase PduV-EutP PF10662.9 gi|14520611|ref|NP_126086.1| - 0.086 12.6 0.0 11 5.8 0.0 2.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation KAP_NTPase PF07693.14 gi|14520611|ref|NP_126086.1| - 0.1 11.8 3.8 13 4.9 0.0 4.3 3 2 2 5 5 5 0 KAP family P-loop domain DnaG_DnaB_bind PF08278.11 gi|14520611|ref|NP_126086.1| - 0.11 13.1 0.1 45 4.7 0.0 3.3 3 0 0 3 3 3 0 DNA primase DnaG DnaB-binding AAA_29 PF13555.6 gi|14520611|ref|NP_126086.1| - 0.12 12.2 0.1 24 4.7 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain IPT PF01745.16 gi|14520611|ref|NP_126086.1| - 0.12 11.7 0.2 21 4.4 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase Ins134_P3_kin_N PF17927.1 gi|14520611|ref|NP_126086.1| - 0.13 12.6 0.1 37 4.8 0.0 3.0 3 0 0 3 3 2 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain DUF438 PF04282.13 gi|14520611|ref|NP_126086.1| - 0.34 10.9 3.9 1.7 8.7 0.0 3.9 4 0 0 4 4 2 0 Family of unknown function (DUF438) AFOR_C PF01314.18 gi|14520612|ref|NP_126087.1| - 7.9e-115 383.9 0.0 1.6e-114 382.9 0.0 1.5 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|14520612|ref|NP_126087.1| - 1.7e-73 246.7 0.0 3e-73 245.9 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer4_9 PF13187.6 gi|14520613|ref|NP_126088.1| - 5.2e-13 48.9 47.8 4.2e-07 30.0 12.1 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|14520613|ref|NP_126088.1| - 3.1e-12 45.8 34.4 1.9e-08 33.8 3.2 5.0 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14520613|ref|NP_126088.1| - 1.1e-11 44.3 34.5 5.3e-06 26.3 2.7 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_11 PF13247.6 gi|14520613|ref|NP_126088.1| - 1.7e-11 44.1 11.3 1.7e-11 44.1 11.3 1.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14520613|ref|NP_126088.1| - 4e-10 40.1 27.8 3e-05 24.5 14.7 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14520613|ref|NP_126088.1| - 9.1e-10 39.3 24.0 0.0031 18.4 2.1 4.2 2 1 2 4 4 4 3 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|14520613|ref|NP_126088.1| - 8e-09 35.5 36.0 1.4e-05 25.1 15.6 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14520613|ref|NP_126088.1| - 1.8e-06 27.7 34.9 0.0006 19.8 2.7 4.2 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14520613|ref|NP_126088.1| - 1.1e-05 25.5 30.4 0.00057 20.0 10.4 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|14520613|ref|NP_126088.1| - 1.8e-05 25.4 42.4 0.0011 19.8 6.0 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14520613|ref|NP_126088.1| - 1.9e-05 25.1 24.4 0.0095 16.5 3.2 4.1 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14520613|ref|NP_126088.1| - 0.00032 21.0 4.2 0.00032 21.0 4.2 4.3 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14520613|ref|NP_126088.1| - 0.043 14.3 3.0 0.043 14.3 3.0 3.8 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14520613|ref|NP_126088.1| - 0.17 12.6 0.7 0.17 12.6 0.7 4.1 4 0 0 4 4 4 0 4Fe-4S single cluster domain SCIFF PF13165.6 gi|14520613|ref|NP_126088.1| - 1.5 8.8 9.9 6.9 6.7 1.2 3.2 3 0 0 3 3 3 0 Six-cysteine peptide SCIFF Phage_rep_org_N PF09681.10 gi|14520614|ref|NP_126089.1| - 0.0085 16.0 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) HisKA PF00512.25 gi|14520614|ref|NP_126089.1| - 0.09 12.8 0.1 2.4 8.2 0.0 2.1 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain CPBP PF02517.16 gi|14520615|ref|NP_126090.1| - 2.9e-12 46.8 3.1 2.9e-12 46.8 3.1 2.6 3 0 0 3 3 3 1 CPBP intramembrane metalloprotease Peptidase_A24 PF01478.18 gi|14520615|ref|NP_126090.1| - 0.84 10.1 17.5 0.11 13.0 4.9 2.8 1 1 1 2 2 2 0 Type IV leader peptidase family Methyltransf_11 PF08241.12 gi|14520616|ref|NP_126091.1| - 6.6e-19 68.4 0.0 1.3e-18 67.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14520616|ref|NP_126091.1| - 1.6e-17 64.0 0.0 2.8e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14520616|ref|NP_126091.1| - 6e-13 49.0 0.0 7.3e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14520616|ref|NP_126091.1| - 5.7e-11 43.0 0.0 9.5e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14520616|ref|NP_126091.1| - 5.4e-10 39.3 0.0 8.2e-10 38.7 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14520616|ref|NP_126091.1| - 3.8e-07 29.7 0.0 1.6e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|14520616|ref|NP_126091.1| - 9.9e-05 22.3 0.0 0.00041 20.3 0.0 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase MetW PF07021.12 gi|14520616|ref|NP_126091.1| - 0.00043 19.9 0.1 0.0016 18.1 0.0 2.1 1 1 1 2 2 2 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|14520616|ref|NP_126091.1| - 0.0022 17.3 0.2 0.011 15.1 0.2 1.9 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_2 PF00891.18 gi|14520616|ref|NP_126091.1| - 0.0031 16.8 0.5 0.022 14.0 0.5 2.0 1 1 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|14520616|ref|NP_126091.1| - 0.011 15.1 0.0 0.028 13.8 0.0 1.7 1 1 0 1 1 1 0 Tellurite resistance protein TehB NNMT_PNMT_TEMT PF01234.17 gi|14520616|ref|NP_126091.1| - 0.016 14.4 0.0 0.079 12.1 0.0 1.9 2 0 0 2 2 2 0 NNMT/PNMT/TEMT family MTS PF05175.14 gi|14520616|ref|NP_126091.1| - 0.031 13.8 0.1 0.32 10.5 0.1 2.0 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_9 PF08003.11 gi|14520616|ref|NP_126091.1| - 0.054 12.4 0.0 0.078 11.9 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1698) Acetyltransf_3 PF13302.7 gi|14520617|ref|NP_126092.1| - 3.1e-22 79.7 0.2 3.7e-22 79.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|14520617|ref|NP_126092.1| - 6e-15 55.5 0.1 7.3e-15 55.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|14520617|ref|NP_126092.1| - 1.5e-14 54.4 0.1 1.9e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|14520617|ref|NP_126092.1| - 2.7e-05 24.5 0.0 3.9e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|14520617|ref|NP_126092.1| - 0.00011 21.8 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|14520617|ref|NP_126092.1| - 0.0002 21.3 0.0 0.00028 20.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Peptidase_M1 PF01433.20 gi|14520618|ref|NP_126093.1| - 1.6e-07 31.1 0.0 2.9e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain TPR_12 PF13424.6 gi|14520618|ref|NP_126093.1| - 0.12 12.6 0.1 2.3 8.6 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat PIN PF01850.21 gi|14520619|ref|NP_126094.1| - 2.1e-13 50.9 0.0 3.4e-13 50.2 0.0 1.4 1 1 0 1 1 1 1 PIN domain VAPB_antitox PF02697.14 gi|14520620|ref|NP_126095.1| - 8e-24 84.2 4.6 8.9e-24 84.1 4.6 1.0 1 0 0 1 1 1 1 Putative antitoxin SseC PF04888.12 gi|14520620|ref|NP_126095.1| - 0.0063 16.2 0.1 0.0076 15.9 0.1 1.1 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Adenyl_cycl_N PF12633.7 gi|14520620|ref|NP_126095.1| - 0.011 15.6 0.1 0.015 15.2 0.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain CdhD PF03599.16 gi|14520620|ref|NP_126095.1| - 0.019 13.7 0.1 0.023 13.4 0.1 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit DegV PF02645.16 gi|14520620|ref|NP_126095.1| - 0.046 13.1 0.1 0.051 12.9 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DUF4635 PF15466.6 gi|14520620|ref|NP_126095.1| - 0.046 13.2 0.4 0.052 13.1 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) Nif11 PF07862.11 gi|14520620|ref|NP_126095.1| - 0.049 13.9 0.2 0.24 11.8 0.1 1.9 2 0 0 2 2 2 0 Nif11 domain RHH_1 PF01402.21 gi|14520620|ref|NP_126095.1| - 0.16 12.0 0.1 1.4 9.0 0.0 2.1 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family OrfB_Zn_ribbon PF07282.11 gi|14520622|ref|NP_126097.1| - 8.4e-17 60.9 0.0 1.7e-16 59.9 0.0 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Resolvase PF00239.21 gi|14520623|ref|NP_126098.1| - 3.4e-25 88.9 0.8 4.7e-25 88.4 0.8 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|14520623|ref|NP_126098.1| - 3.3e-12 46.4 0.3 1.1e-11 44.7 0.2 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|14520623|ref|NP_126098.1| - 0.0036 17.1 0.0 0.01 15.6 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain Helicase_C PF00271.31 gi|14520623|ref|NP_126098.1| - 0.013 15.8 0.1 0.035 14.4 0.0 1.7 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Pan3_PK PF18101.1 gi|14520623|ref|NP_126098.1| - 0.049 13.6 0.1 0.21 11.6 0.1 1.9 2 0 0 2 2 2 0 Pan3 Pseudokinase domain HTH_28 PF13518.6 gi|14520623|ref|NP_126098.1| - 0.067 13.3 0.2 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain PGAP1 PF07819.13 gi|14520623|ref|NP_126098.1| - 0.075 12.7 0.2 0.18 11.5 0.1 1.5 1 1 0 1 1 1 0 PGAP1-like protein CPBP PF02517.16 gi|14520624|ref|NP_126099.1| - 3.6e-11 43.3 7.1 3.6e-11 43.3 7.1 2.3 3 0 0 3 3 3 1 CPBP intramembrane metalloprotease Wzz PF02706.15 gi|14520624|ref|NP_126099.1| - 0.64 10.4 0.1 0.64 10.4 0.1 2.5 3 0 0 3 3 3 0 Chain length determinant protein LapA_dom PF06305.11 gi|14520625|ref|NP_126100.1| - 0.024 14.4 0.2 0.046 13.5 0.2 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain MdcG PF10620.9 gi|14520626|ref|NP_126101.1| - 0.052 13.3 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG Tail_spike_N PF18668.1 gi|14520627|ref|NP_126102.1| - 0.087 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain CN_hydrolase PF00795.22 gi|14520628|ref|NP_126103.1| - 7.3e-18 64.8 0.0 8.2e-18 64.7 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase tRNA_bind PF01588.20 gi|14520629|ref|NP_126104.1| - 3e-26 91.3 0.0 3.4e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain Rubrerythrin PF02915.17 gi|14520630|ref|NP_126105.1| - 6.4e-08 33.1 2.2 7.3e-08 32.9 2.2 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|14520630|ref|NP_126105.1| - 8.5e-07 29.3 0.5 2.8e-06 27.7 0.5 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF2383) Ferritin PF00210.24 gi|14520630|ref|NP_126105.1| - 0.0062 16.5 2.3 0.024 14.6 1.1 1.9 1 1 1 2 2 2 2 Ferritin-like domain Ferritin_2 PF13668.6 gi|14520630|ref|NP_126105.1| - 0.099 12.8 1.0 0.11 12.6 1.0 1.1 1 0 0 1 1 1 0 Ferritin-like domain DUF2875 PF11394.8 gi|14520630|ref|NP_126105.1| - 0.11 11.3 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2875) Asp_Glu_race PF01177.22 gi|14520631|ref|NP_126106.1| - 5.7e-55 186.6 0.0 6.5e-55 186.4 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase DSPc PF00782.20 gi|14520632|ref|NP_126107.1| - 1.3e-15 57.4 0.0 1.7e-15 57.0 0.0 1.3 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 gi|14520632|ref|NP_126107.1| - 4.2e-09 36.3 0.0 5.4e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 gi|14520632|ref|NP_126107.1| - 1.3e-06 28.2 0.0 1.5e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 gi|14520632|ref|NP_126107.1| - 0.00014 22.0 0.0 0.0044 17.1 0.0 2.2 1 1 1 2 2 2 1 Inositol hexakisphosphate Rhodanese PF00581.20 gi|14520632|ref|NP_126107.1| - 0.024 15.2 0.0 0.047 14.2 0.0 1.5 1 1 0 1 1 1 0 Rhodanese-like domain HSP20 PF00011.21 gi|14520633|ref|NP_126108.1| - 1.1e-19 70.5 0.8 1.3e-19 70.2 0.8 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|14520633|ref|NP_126108.1| - 2.8e-14 52.4 0.2 4e-14 51.9 0.2 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 gi|14520633|ref|NP_126108.1| - 0.0009 19.4 0.1 0.0069 16.5 0.1 2.0 2 0 0 2 2 2 1 GvpH CS PF04969.16 gi|14520633|ref|NP_126108.1| - 0.0095 16.9 0.0 0.013 16.5 0.0 1.2 1 0 0 1 1 1 1 CS domain PIH1_CS PF18201.1 gi|14520633|ref|NP_126108.1| - 0.032 14.6 0.0 0.054 13.9 0.0 1.4 1 0 0 1 1 1 0 PIH1 CS-like domain PfkB PF00294.24 gi|14520634|ref|NP_126109.1| - 2.4e-44 151.8 0.1 3.1e-44 151.5 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ABC2_membrane PF01061.24 gi|14520635|ref|NP_126110.1| - 2.7e-18 66.2 21.6 2.7e-18 66.2 21.6 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14520635|ref|NP_126110.1| - 3.8e-08 32.8 30.0 3.8e-08 32.8 30.0 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|14520635|ref|NP_126110.1| - 0.034 13.4 27.3 0.042 13.1 23.8 2.1 1 1 1 2 2 2 0 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|14520636|ref|NP_126111.1| - 2.9e-17 62.8 26.5 2.9e-17 62.8 26.5 2.1 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14520636|ref|NP_126111.1| - 3.9e-05 22.9 29.1 3.9e-05 22.9 29.1 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|14520637|ref|NP_126112.1| - 1.9e-30 106.2 0.0 3.2e-30 105.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14520637|ref|NP_126112.1| - 5.8e-12 46.0 0.9 2.1e-06 27.7 0.0 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|14520637|ref|NP_126112.1| - 1.8e-08 34.9 0.4 5e-08 33.6 0.4 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|14520637|ref|NP_126112.1| - 1.1e-05 25.4 0.1 0.036 13.8 0.0 2.4 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|14520637|ref|NP_126112.1| - 0.00015 22.4 0.0 0.00032 21.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|14520637|ref|NP_126112.1| - 0.0038 16.9 0.0 0.0072 16.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|14520637|ref|NP_126112.1| - 0.0085 15.8 0.0 0.024 14.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|14520637|ref|NP_126112.1| - 0.009 16.4 1.0 0.12 12.8 1.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|14520637|ref|NP_126112.1| - 0.011 15.7 1.6 0.38 10.6 0.1 2.3 1 1 1 2 2 2 0 NTPase AAA_22 PF13401.6 gi|14520637|ref|NP_126112.1| - 0.018 15.3 0.3 0.68 10.2 0.1 2.4 1 1 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|14520637|ref|NP_126112.1| - 0.019 14.9 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_13 PF13166.6 gi|14520637|ref|NP_126112.1| - 0.032 12.9 0.1 5.4 5.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|14520637|ref|NP_126112.1| - 0.05 13.9 0.1 0.11 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|14520637|ref|NP_126112.1| - 0.054 13.1 0.0 0.14 11.8 0.0 1.7 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|14520637|ref|NP_126112.1| - 0.16 12.2 0.2 0.38 11.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|14520638|ref|NP_126113.1| - 0.074 12.4 0.2 0.15 11.4 0.2 1.7 1 1 0 1 1 1 0 KaiC PAXNEB PF05625.11 gi|14520638|ref|NP_126113.1| - 0.092 11.9 0.3 0.52 9.4 0.0 2.0 2 0 0 2 2 2 0 PAXNEB protein MCPsignal PF00015.21 gi|14520639|ref|NP_126114.1| - 6e-42 143.4 53.7 6.2e-38 130.3 15.3 5.0 1 1 5 6 6 6 4 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|14520639|ref|NP_126114.1| - 1.4e-10 41.3 6.0 6e-07 29.7 0.0 5.3 2 2 3 5 5 5 1 HAMP domain Arfaptin PF06456.13 gi|14520639|ref|NP_126114.1| - 2.3e-07 30.7 3.8 2.3e-07 30.7 3.8 2.9 1 1 2 3 3 3 1 Arfaptin-like domain DUF948 PF06103.11 gi|14520639|ref|NP_126114.1| - 2.5e-06 27.6 43.8 0.064 13.5 1.4 7.7 1 1 6 7 7 7 2 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 gi|14520639|ref|NP_126114.1| - 1.2e-05 25.4 33.1 0.00028 20.9 4.8 4.7 2 1 2 4 4 4 1 Baculovirus polyhedron envelope protein, PEP, C terminus ApoLp-III PF07464.11 gi|14520639|ref|NP_126114.1| - 0.00025 21.2 43.2 0.019 15.0 8.5 5.4 2 1 3 5 5 5 2 Apolipophorin-III precursor (apoLp-III) Med9 PF07544.13 gi|14520639|ref|NP_126114.1| - 0.00033 20.7 27.1 0.096 12.8 4.1 6.3 6 1 0 6 6 6 2 RNA polymerase II transcription mediator complex subunit 9 Prominin PF05478.11 gi|14520639|ref|NP_126114.1| - 0.00076 17.6 29.5 0.016 13.2 12.6 2.9 1 1 2 3 3 3 3 Prominin CorA PF01544.18 gi|14520639|ref|NP_126114.1| - 0.00092 18.6 31.4 0.0026 17.1 8.4 4.4 2 1 2 5 5 5 2 CorA-like Mg2+ transporter protein Sec8_exocyst PF04048.14 gi|14520639|ref|NP_126114.1| - 0.0025 17.7 1.5 0.0025 17.7 1.5 5.2 3 2 2 5 5 5 1 Sec8 exocyst complex component specific domain Barstar PF01337.18 gi|14520639|ref|NP_126114.1| - 0.0047 16.9 0.2 0.17 11.9 0.0 3.5 2 1 0 2 2 2 1 Barstar (barnase inhibitor) SesA PF17107.5 gi|14520639|ref|NP_126114.1| - 0.0047 17.1 28.2 0.69 10.1 1.9 5.3 2 1 4 6 6 6 2 N-terminal domain on NACHT_NTPase and P-loop NTPases DUF1664 PF07889.12 gi|14520639|ref|NP_126114.1| - 0.0084 16.1 44.1 0.35 10.9 6.5 6.3 3 2 3 6 6 6 3 Protein of unknown function (DUF1664) HisKA_3 PF07730.13 gi|14520639|ref|NP_126114.1| - 0.017 15.6 29.2 7.8 7.1 0.2 8.2 5 2 1 7 7 7 0 Histidine kinase TMP_2 PF06791.13 gi|14520639|ref|NP_126114.1| - 0.022 14.4 26.9 0.24 11.0 2.6 4.9 3 1 3 6 6 5 0 Prophage tail length tape measure protein Laminin_II PF06009.12 gi|14520639|ref|NP_126114.1| - 0.041 13.9 46.1 0.64 10.0 10.5 6.2 3 2 2 6 6 6 0 Laminin Domain II Serine_rich PF08824.10 gi|14520639|ref|NP_126114.1| - 0.063 13.3 20.9 0.54 10.3 2.3 4.7 3 2 1 4 4 4 0 Serine rich protein interaction domain Mce4_CUP1 PF11887.8 gi|14520639|ref|NP_126114.1| - 0.074 12.5 11.9 1.1 8.7 1.7 3.2 1 1 1 3 3 3 0 Cholesterol uptake porter CUP1 of Mce4, putative Chlamy_scaf PF09675.10 gi|14520639|ref|NP_126114.1| - 0.077 13.4 0.6 4.7 7.6 0.0 3.1 3 0 0 3 3 2 0 Chlamydia-phage Chp2 scaffold (Chlamy_scaf) ATG16 PF08614.11 gi|14520639|ref|NP_126114.1| - 0.13 12.5 27.0 0.21 11.8 7.0 3.3 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) COG2 PF06148.11 gi|14520639|ref|NP_126114.1| - 0.15 12.1 38.4 0.7 10.0 5.4 6.3 3 2 3 6 6 6 0 COG (conserved oligomeric Golgi) complex component, COG2 RPW8 PF05659.11 gi|14520639|ref|NP_126114.1| - 0.18 11.5 23.8 0.1 12.3 0.6 5.7 5 2 2 7 7 6 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 GPW_gp25 PF04965.14 gi|14520639|ref|NP_126114.1| - 0.18 11.6 4.1 0.57 10.0 1.5 3.0 2 0 0 2 2 2 0 Gene 25-like lysozyme TarH PF02203.15 gi|14520639|ref|NP_126114.1| - 0.2 11.6 0.1 0.2 11.6 0.1 4.5 3 1 1 4 4 4 0 Tar ligand binding domain homologue PG_binding_4 PF12229.8 gi|14520639|ref|NP_126114.1| - 0.28 11.5 10.9 0.19 12.0 1.3 3.5 3 0 0 3 3 3 0 Putative peptidoglycan binding domain Tup_N PF08581.10 gi|14520639|ref|NP_126114.1| - 0.3 11.4 27.3 0.078 13.3 2.5 6.5 6 3 2 8 8 6 0 Tup N-terminal AIP3 PF03915.13 gi|14520639|ref|NP_126114.1| - 0.35 9.9 37.3 0.19 10.8 15.2 3.5 1 1 2 3 3 3 0 Actin interacting protein 3 NOG1_N PF17835.1 gi|14520639|ref|NP_126114.1| - 0.38 10.7 23.1 1.1 9.2 0.1 5.1 3 3 2 5 5 5 0 NOG1 N-terminal helical domain EzrA PF06160.12 gi|14520639|ref|NP_126114.1| - 0.42 8.7 39.5 0.012 13.8 30.5 3.0 2 1 0 3 3 3 0 Septation ring formation regulator, EzrA Laminin_I PF06008.14 gi|14520639|ref|NP_126114.1| - 0.53 9.9 47.7 0.024 14.3 9.4 5.0 2 1 3 5 5 5 0 Laminin Domain I Fib_alpha PF08702.10 gi|14520639|ref|NP_126114.1| - 0.62 10.2 35.4 0.17 12.1 6.7 5.4 3 2 3 6 6 6 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 gi|14520639|ref|NP_126114.1| - 0.67 8.8 44.7 0.2 10.5 18.7 3.9 2 1 3 5 5 5 0 Spc7 kinetochore protein DASH_Duo1 PF08651.10 gi|14520639|ref|NP_126114.1| - 0.7 9.7 29.8 0.61 9.9 0.6 7.3 6 2 1 8 8 7 0 DASH complex subunit Duo1 CREPT PF16566.5 gi|14520639|ref|NP_126114.1| - 0.85 9.8 23.6 0.23 11.6 2.9 4.5 2 2 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour YdaT_toxin PF06254.11 gi|14520639|ref|NP_126114.1| - 0.89 10.2 5.6 0.57 10.8 0.9 3.0 3 0 0 3 3 2 0 Putative bacterial toxin ydaT Ribosomal_S8 PF00410.19 gi|14520639|ref|NP_126114.1| - 1 9.3 6.0 0.45 10.5 2.2 2.4 2 0 0 2 2 2 0 Ribosomal protein S8 Occludin_ELL PF07303.13 gi|14520639|ref|NP_126114.1| - 1 10.1 15.1 23 5.8 2.1 5.1 4 1 1 5 5 4 0 Occludin homology domain APG17 PF04108.12 gi|14520639|ref|NP_126114.1| - 1.1 8.3 38.1 0.41 9.7 3.1 5.0 1 1 3 5 5 5 0 Autophagy protein Apg17 Hormone_1 PF00103.20 gi|14520639|ref|NP_126114.1| - 1.5 8.5 20.9 0.23 11.2 1.3 4.5 2 2 2 5 5 5 0 Somatotropin hormone family DUF4263 PF14082.6 gi|14520639|ref|NP_126114.1| - 1.7 8.9 10.5 0.58 10.4 0.2 3.7 4 1 0 4 4 3 0 Domain of unknown function (DUF4263) FH2 PF02181.23 gi|14520639|ref|NP_126114.1| - 1.8 7.6 25.0 0.43 9.6 0.8 4.2 3 1 2 5 5 4 0 Formin Homology 2 Domain Syntaxin_2 PF14523.6 gi|14520639|ref|NP_126114.1| - 1.9 8.9 32.8 8.5 6.8 2.6 6.0 2 1 2 6 6 6 0 Syntaxin-like protein HAUS-augmin3 PF14932.6 gi|14520639|ref|NP_126114.1| - 2 7.9 29.6 1.8 8.0 2.1 3.3 1 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 DUF4559 PF15112.6 gi|14520639|ref|NP_126114.1| - 2.3 7.8 28.2 0.17 11.6 7.5 3.6 2 1 3 5 5 4 0 Domain of unknown function (DUF4559) PCYCGC PF13798.6 gi|14520639|ref|NP_126114.1| - 2.7 7.8 4.6 5.6 6.8 1.6 3.0 2 1 0 2 2 2 0 Protein of unknown function with PCYCGC motif RasGAP_C PF03836.15 gi|14520639|ref|NP_126114.1| - 3.2 7.9 19.4 0.29 11.3 2.6 3.9 2 2 2 4 4 4 0 RasGAP C-terminus STAT_alpha PF01017.20 gi|14520639|ref|NP_126114.1| - 3.6 7.4 23.5 0.83 9.5 0.7 4.4 2 1 0 4 4 4 0 STAT protein, all-alpha domain NPV_P10 PF05531.12 gi|14520639|ref|NP_126114.1| - 3.9 8.0 38.7 0.11 13.0 3.2 6.7 4 2 2 6 6 5 0 Nucleopolyhedrovirus P10 protein SpmSyn_N PF17950.1 gi|14520639|ref|NP_126114.1| - 4.2 7.6 11.3 8.3 6.7 0.2 5.3 4 1 0 5 5 5 0 S-adenosylmethionine decarboxylase N -terminal CALCOCO1 PF07888.11 gi|14520639|ref|NP_126114.1| - 4.3 6.1 37.3 2.5 6.9 8.8 2.9 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like Virul_fac_BrkB PF03631.15 gi|14520639|ref|NP_126114.1| - 4.6 6.8 9.8 0.059 13.0 0.5 2.5 4 0 0 4 4 1 0 Virulence factor BrkB MafB PF06255.13 gi|14520639|ref|NP_126114.1| - 5 6.5 24.1 3.5 7.0 2.2 2.9 1 1 2 3 3 3 0 Neisseria toxin MafB MutS_III PF05192.18 gi|14520639|ref|NP_126114.1| - 5.2 7.3 25.2 9.2e+02 -0.1 23.1 3.2 1 1 1 2 2 2 0 MutS domain III T3SSipB PF16535.5 gi|14520639|ref|NP_126114.1| - 5.2 7.5 28.6 0.94 9.9 5.6 4.1 1 1 2 3 3 2 0 Type III cell invasion protein SipB I_LWEQ PF01608.17 gi|14520639|ref|NP_126114.1| - 5.2 7.3 38.8 0.83 9.9 3.0 3.9 3 1 1 4 4 3 0 I/LWEQ domain T3SS_needle_E PF08988.10 gi|14520639|ref|NP_126114.1| - 5.6 7.2 8.9 1.9 8.7 0.0 4.2 4 0 0 4 4 4 0 Type III secretion system, cytoplasmic E component of needle BAR_3 PF16746.5 gi|14520639|ref|NP_126114.1| - 5.9 6.5 20.8 1.9 8.1 1.8 4.5 2 1 4 6 6 6 0 BAR domain of APPL family DUF648 PF04890.13 gi|14520639|ref|NP_126114.1| - 6.2 6.5 9.9 0.076 12.8 0.4 2.2 2 1 0 2 2 1 0 Family of unknown function (DUF648) Syntaxin-6_N PF09177.11 gi|14520639|ref|NP_126114.1| - 6.7 7.3 32.9 71 4.0 9.1 5.6 2 1 0 3 3 3 0 Syntaxin 6, N-terminal ApoO PF09769.9 gi|14520639|ref|NP_126114.1| - 8.5 6.3 11.9 3.8 7.5 0.1 4.4 3 2 1 4 4 3 0 Apolipoprotein O DUF745 PF05335.13 gi|14520639|ref|NP_126114.1| - 9 6.0 42.3 4.6 6.9 18.1 4.4 3 1 2 5 5 4 0 Protein of unknown function (DUF745) TACC_C PF05010.14 gi|14520639|ref|NP_126114.1| - 9.1 6.0 33.9 2.4 7.9 7.8 4.2 1 1 3 4 4 4 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF257 PF03192.13 gi|14520640|ref|NP_126115.1| - 3.2e-20 72.8 3.2 4.2e-20 72.4 3.2 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 Methyltransf_28 PF02636.17 gi|14520640|ref|NP_126115.1| - 0.035 13.7 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase TssO PF17561.2 gi|14520640|ref|NP_126115.1| - 0.064 13.4 0.3 0.12 12.5 0.3 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO Zn-ribbon_8 PF09723.10 gi|14520641|ref|NP_126116.1| - 0.00027 21.0 0.1 0.12 12.5 0.0 2.3 2 0 0 2 2 2 1 Zinc ribbon domain zf-Dof PF02701.15 gi|14520641|ref|NP_126116.1| - 0.00042 20.4 1.2 0.00065 19.8 1.2 1.2 1 0 0 1 1 1 1 Dof domain, zinc finger Zn_Tnp_IS1595 PF12760.7 gi|14520641|ref|NP_126116.1| - 0.0011 18.9 0.3 0.0023 17.8 0.3 1.6 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zf-ISL3 PF14690.6 gi|14520641|ref|NP_126116.1| - 0.0026 18.4 4.3 0.97 10.2 0.1 2.4 2 0 0 2 2 2 2 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TF_Zn_Ribbon PF08271.12 gi|14520641|ref|NP_126116.1| - 0.0036 16.8 5.6 0.36 10.4 0.4 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding Elf1 PF05129.13 gi|14520641|ref|NP_126116.1| - 0.0057 16.7 0.2 0.0086 16.1 0.2 1.2 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like zf-H2C2_2 PF13465.6 gi|14520641|ref|NP_126116.1| - 0.018 15.4 2.6 0.87 10.1 0.4 2.3 2 0 0 2 2 2 0 Zinc-finger double domain PyrI_C PF02748.15 gi|14520641|ref|NP_126116.1| - 0.021 14.7 0.9 6.8 6.7 0.0 2.4 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Zn_Tnp_IS1 PF03811.13 gi|14520641|ref|NP_126116.1| - 0.026 14.2 3.0 0.081 12.7 3.0 1.7 1 1 0 1 1 1 0 InsA N-terminal domain BAMBI PF06211.12 gi|14520641|ref|NP_126116.1| - 0.028 14.7 0.1 0.04 14.2 0.1 1.3 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain C1_1 PF00130.22 gi|14520641|ref|NP_126116.1| - 0.028 14.3 0.5 0.041 13.8 0.5 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn_ribbon_recom PF13408.6 gi|14520641|ref|NP_126116.1| - 0.032 14.7 1.0 0.057 13.9 1.0 1.4 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain zinc_ribbon_10 PF10058.9 gi|14520641|ref|NP_126116.1| - 0.073 12.8 0.9 0.13 12.0 0.9 1.4 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-C2H2_4 PF13894.6 gi|14520641|ref|NP_126116.1| - 0.087 13.7 2.3 0.87 10.6 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger TFIIS_C PF01096.18 gi|14520641|ref|NP_126116.1| - 0.095 12.6 3.9 0.31 10.9 3.9 1.8 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) zf-C2HC_2 PF13913.6 gi|14520641|ref|NP_126116.1| - 0.12 12.3 7.0 0.28 11.1 0.8 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-RING_7 PF02591.15 gi|14520641|ref|NP_126116.1| - 0.2 11.9 2.1 8.9 6.6 0.0 3.1 3 0 0 3 3 3 0 C4-type zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|14520641|ref|NP_126116.1| - 0.45 10.3 3.3 9.4 6.1 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-C2H2 PF00096.26 gi|14520641|ref|NP_126116.1| - 0.55 10.8 5.6 0.5 10.9 0.6 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 gi|14520641|ref|NP_126116.1| - 0.65 10.1 0.2 0.65 10.1 0.2 2.0 2 0 0 2 2 2 0 C2H2-type zinc finger zinc_ribbon_4 PF13717.6 gi|14520641|ref|NP_126116.1| - 0.74 9.8 5.3 9 6.3 1.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain CBS PF00571.28 gi|14520642|ref|NP_126117.1| - 8.6e-27 93.4 8.3 6.6e-13 48.9 0.2 2.3 2 0 0 2 2 2 2 CBS domain Acetyltransf_1 PF00583.25 gi|14520642|ref|NP_126117.1| - 0.0087 16.3 0.0 0.018 15.2 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|14520642|ref|NP_126117.1| - 0.0092 15.9 0.0 0.55 10.2 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Nre_N PF04894.12 gi|14520643|ref|NP_126118.1| - 2.8e-103 345.5 0.0 3.5e-103 345.1 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|14520643|ref|NP_126118.1| - 3.4e-36 123.5 0.2 5.6e-36 122.8 0.2 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal DUF1581 PF07619.11 gi|14520643|ref|NP_126118.1| - 0.16 12.2 0.0 0.29 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1581) AsnC_trans_reg PF01037.21 gi|33356687|ref|NP_877613.1| - 3e-15 55.9 0.3 3.3e-15 55.8 0.3 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|33356687|ref|NP_877613.1| - 7.7e-06 25.9 1.9 1e-05 25.5 1.9 1.2 1 0 0 1 1 1 1 NapD protein ACT_4 PF13291.6 gi|33356687|ref|NP_877613.1| - 0.0076 16.8 0.4 1.8 9.2 0.0 2.2 2 0 0 2 2 2 2 ACT domain GYD PF08734.11 gi|33356687|ref|NP_877613.1| - 0.057 13.4 0.0 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 GYD domain HHH PF00633.23 gi|33356687|ref|NP_877613.1| - 0.082 12.8 0.1 0.19 11.7 0.1 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif SRP19 PF01922.17 gi|33356688|ref|NP_126119.2| - 3.1e-13 50.5 0.1 4e-13 50.1 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein DUF257 PF03192.13 gi|14520645|ref|NP_126120.1| - 5.3e-10 39.4 1.2 1.1e-09 38.4 1.2 1.4 1 1 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 DUF2073 PF09846.9 gi|14520645|ref|NP_126120.1| - 0.054 13.4 0.3 0.13 12.1 0.3 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2073) GCD14 PF08704.10 gi|14520646|ref|NP_126121.1| - 2.2e-29 102.9 0.0 5e-27 95.1 0.0 2.1 1 1 1 2 2 2 2 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|14520646|ref|NP_126121.1| - 5.6e-12 45.9 0.0 7.7e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|14520646|ref|NP_126121.1| - 7.6e-10 38.8 0.0 9.8e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14_N PF14801.6 gi|14520646|ref|NP_126121.1| - 1.4e-08 34.5 0.1 3.6e-08 33.1 0.1 1.8 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term Methyltransf_25 PF13649.6 gi|14520646|ref|NP_126121.1| - 2.4e-07 31.4 0.0 4e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14520646|ref|NP_126121.1| - 2.6e-07 31.2 0.0 4.4e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|14520646|ref|NP_126121.1| - 1.2e-06 27.9 0.0 1.7e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.6 gi|14520646|ref|NP_126121.1| - 0.00018 22.5 0.0 0.00081 20.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|14520646|ref|NP_126121.1| - 0.00024 20.7 0.0 0.0021 17.6 0.0 2.3 2 1 0 2 2 2 1 Methyltransferase small domain Methyltr_RsmB-F PF01189.17 gi|14520646|ref|NP_126121.1| - 0.00042 20.0 0.0 0.02 14.6 0.0 2.1 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_12 PF08242.12 gi|14520646|ref|NP_126121.1| - 0.003 18.3 0.0 0.0079 16.9 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14520646|ref|NP_126121.1| - 0.004 16.5 0.0 0.0065 15.8 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 gi|14520646|ref|NP_126121.1| - 0.0069 15.6 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Met_10 PF02475.16 gi|14520646|ref|NP_126121.1| - 0.022 14.5 0.0 0.039 13.7 0.0 1.4 2 0 0 2 2 2 0 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|14520646|ref|NP_126121.1| - 0.025 14.4 0.0 0.098 12.5 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14520646|ref|NP_126121.1| - 0.031 14.2 0.0 0.052 13.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Tenui_NCP PF04876.12 gi|14520646|ref|NP_126121.1| - 0.052 13.1 0.0 0.086 12.4 0.0 1.3 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein CxxCxxCC PF03692.15 gi|14520647|ref|NP_126122.1| - 1.5e-19 70.5 0.3 2.1e-19 70.0 0.3 1.2 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain SapC PF07277.11 gi|14520647|ref|NP_126122.1| - 0.0029 17.2 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 SapC MTS PF05175.14 gi|14520648|ref|NP_126123.1| - 2.9e-18 66.0 0.0 1.4e-16 60.6 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|14520648|ref|NP_126123.1| - 3e-15 56.3 0.0 4.4e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|14520648|ref|NP_126123.1| - 5.1e-14 52.3 0.1 8.9e-14 51.6 0.0 1.3 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|14520648|ref|NP_126123.1| - 3.1e-09 37.4 0.0 6.8e-09 36.3 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14520648|ref|NP_126123.1| - 1.6e-07 31.4 0.0 3.1e-05 24.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14520648|ref|NP_126123.1| - 3.7e-07 30.7 0.0 1.1e-06 29.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|14520648|ref|NP_126123.1| - 5.6e-07 29.5 0.0 7.9e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|14520648|ref|NP_126123.1| - 1.3e-06 28.3 0.0 5.2e-06 26.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|14520648|ref|NP_126123.1| - 2e-05 24.4 0.0 3.1e-05 23.8 0.0 1.5 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PCMT PF01135.19 gi|14520648|ref|NP_126123.1| - 2.1e-05 24.4 0.0 3.2e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.15 gi|14520648|ref|NP_126123.1| - 0.00017 21.3 0.0 0.00023 20.9 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.12 gi|14520648|ref|NP_126123.1| - 0.00019 22.1 0.1 0.00035 21.2 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|14520648|ref|NP_126123.1| - 0.00024 20.6 0.1 0.00057 19.4 0.0 1.6 2 0 0 2 2 2 1 Putative methyltransferase N6_N4_Mtase PF01555.18 gi|14520648|ref|NP_126123.1| - 0.00038 20.2 0.0 0.0021 17.8 0.0 1.9 2 0 0 2 2 2 1 DNA methylase Methyltransf_15 PF09445.10 gi|14520648|ref|NP_126123.1| - 0.0011 18.6 0.0 0.0014 18.3 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.16 gi|14520648|ref|NP_126123.1| - 0.0057 15.9 0.0 0.0071 15.6 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase rRNA_methylase PF06962.12 gi|14520648|ref|NP_126123.1| - 0.0064 16.5 0.0 0.013 15.5 0.0 1.5 1 1 0 1 1 1 1 Putative rRNA methylase Ubie_methyltran PF01209.18 gi|14520648|ref|NP_126123.1| - 0.0087 15.4 0.1 0.024 14.0 0.1 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family N6_Mtase PF02384.16 gi|14520648|ref|NP_126123.1| - 0.018 14.3 0.0 0.022 14.0 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase Methyltransf_24 PF13578.6 gi|14520648|ref|NP_126123.1| - 0.019 16.0 0.0 0.034 15.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.19 gi|14520648|ref|NP_126123.1| - 0.02 14.4 0.1 0.82 9.1 0.0 2.0 2 0 0 2 2 2 0 MraW methylase family Methyltransf_32 PF13679.6 gi|14520648|ref|NP_126123.1| - 0.037 14.0 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 gi|14520648|ref|NP_126123.1| - 0.037 13.6 0.0 0.14 11.6 0.0 1.9 1 1 0 1 1 1 0 Histone methylation protein DOT1 CMAS PF02353.20 gi|14520648|ref|NP_126123.1| - 0.046 13.0 0.0 0.13 11.6 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase MetW PF07021.12 gi|14520648|ref|NP_126123.1| - 0.12 12.0 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DUF5616 PF18481.1 gi|14520649|ref|NP_126124.1| - 5.4e-37 127.2 0.0 7.5e-37 126.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|14520649|ref|NP_126124.1| - 1.5e-22 79.0 1.1 2.4e-22 78.4 1.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF434) EamA PF00892.20 gi|14520650|ref|NP_126125.1| - 1.2e-42 145.3 41.9 2.9e-22 79.3 20.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|14520650|ref|NP_126125.1| - 0.00027 20.4 4.0 0.00027 20.4 4.0 3.0 1 1 1 3 3 3 2 Triose-phosphate Transporter family PUNUT PF16913.5 gi|14520650|ref|NP_126125.1| - 0.0088 15.3 21.4 0.0051 16.1 13.8 2.8 2 1 0 2 2 2 1 Purine nucleobase transmembrane transport TMEM234 PF10639.9 gi|14520650|ref|NP_126125.1| - 0.027 14.5 1.4 0.027 14.5 1.4 2.7 3 0 0 3 3 3 0 Putative transmembrane family 234 7TM_GPCR_Srv PF10323.9 gi|14520651|ref|NP_126126.1| - 0.0038 16.6 2.7 0.0055 16.1 2.7 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srv HMGL-like PF00682.19 gi|14520652|ref|NP_126127.1| - 1.7e-60 204.9 0.0 2e-60 204.6 0.0 1.1 1 0 0 1 1 1 1 HMGL-like AP_endonuc_2 PF01261.24 gi|14520652|ref|NP_126127.1| - 0.025 14.0 0.1 0.086 12.3 0.1 1.8 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel ComA PF02679.15 gi|14520652|ref|NP_126127.1| - 0.099 12.1 0.0 0.31 10.5 0.0 1.8 2 0 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) Aconitase PF00330.20 gi|14520653|ref|NP_126128.1| - 1.8e-69 235.0 1.4 3.5e-35 121.9 0.1 3.4 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|14520653|ref|NP_126128.1| - 0.0067 15.2 0.0 0.0095 14.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Aconitase_C PF00694.19 gi|14520654|ref|NP_126129.1| - 2.1e-18 66.9 0.0 3.1e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|14520654|ref|NP_126129.1| - 9.2e-07 28.7 0.0 9.8e-05 22.1 0.0 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.20 gi|14520655|ref|NP_126130.1| - 3.3e-84 283.0 0.0 5.6e-84 282.2 0.0 1.4 1 1 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase LPD7 PF18821.1 gi|14520655|ref|NP_126130.1| - 0.06 13.5 0.2 0.13 12.4 0.2 1.5 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 7 RimK PF08443.11 gi|14520656|ref|NP_126131.1| - 1.3e-23 83.6 0.0 2.1e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|14520656|ref|NP_126131.1| - 1.4e-05 25.2 0.0 2.6e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|14520656|ref|NP_126131.1| - 1.7e-05 24.5 0.0 0.031 13.8 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|14520656|ref|NP_126131.1| - 0.0023 17.5 0.0 0.36 10.3 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain Semialdhyde_dh PF01118.24 gi|14520657|ref|NP_126132.1| - 2.9e-28 98.7 0.0 6.1e-28 97.7 0.0 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.21 gi|14520657|ref|NP_126132.1| - 0.0076 15.7 0.1 0.058 12.9 0.0 2.0 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family AA_kinase PF00696.28 gi|14520658|ref|NP_126133.1| - 1.4e-29 103.4 2.1 1.6e-29 103.2 2.1 1.0 1 0 0 1 1 1 1 Amino acid kinase family Isochorismatase PF00857.20 gi|14520658|ref|NP_126133.1| - 0.023 14.9 0.0 4.2 7.5 0.0 2.6 2 1 0 2 2 2 0 Isochorismatase family B12-binding PF02310.19 gi|14520658|ref|NP_126133.1| - 0.046 13.8 0.0 0.1 12.6 0.0 1.7 1 1 0 1 1 1 0 B12 binding domain DUF134 PF02001.16 gi|14520658|ref|NP_126133.1| - 0.052 14.1 0.5 0.5 10.9 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function DUF134 Aminotran_3 PF00202.21 gi|14520659|ref|NP_126134.1| - 2.9e-98 329.2 0.0 4.2e-98 328.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|14520659|ref|NP_126134.1| - 0.0074 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|14520659|ref|NP_126134.1| - 0.0083 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|14520659|ref|NP_126134.1| - 0.024 14.0 0.3 0.049 12.9 0.3 1.5 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Peptidase_M20 PF01546.28 gi|14520660|ref|NP_126135.1| - 2.9e-21 76.1 0.0 5e-21 75.3 0.0 1.4 2 0 0 2 2 2 1 Peptidase family M20/M25/M40 Phage_rep_org_N PF09681.10 gi|33356690|ref|NP_877615.1| - 0.087 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HisKA PF00512.25 gi|33356690|ref|NP_877615.1| - 0.12 12.5 2.9 4.5 7.4 0.1 2.1 1 1 1 2 2 2 0 His Kinase A (phospho-acceptor) domain Transketolase_N PF00456.21 gi|14520661|ref|NP_126136.1| - 7.1e-25 87.7 0.0 1.5e-24 86.6 0.0 1.4 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|14520661|ref|NP_126136.1| - 7.2e-09 35.3 0.0 8.7e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|14520661|ref|NP_126136.1| - 1.3e-06 27.6 0.0 1.8e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|14520661|ref|NP_126136.1| - 4.4e-06 26.6 0.3 1.7e-05 24.7 0.3 1.8 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 gi|14520661|ref|NP_126136.1| - 6.2e-05 22.0 0.0 9.6e-05 21.3 0.0 1.2 1 0 0 1 1 1 1 XFP N-terminal domain Transket_pyr PF02779.24 gi|14520662|ref|NP_126137.1| - 3.8e-37 127.7 0.0 5.7e-37 127.1 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|14520662|ref|NP_126137.1| - 5.8e-31 106.9 0.4 1.2e-30 106.0 0.0 1.7 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|14520662|ref|NP_126137.1| - 4.2e-07 30.2 0.3 2.6e-06 27.7 0.1 2.1 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II DAHP_synth_1 PF00793.20 gi|14520663|ref|NP_126138.1| - 1.3e-79 266.9 0.0 1.7e-79 266.6 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.14 gi|14520663|ref|NP_126138.1| - 5.8e-08 32.5 0.0 4.9e-07 29.5 0.0 1.9 2 0 0 2 2 2 1 NeuB family AP_endonuc_2 PF01261.24 gi|14520663|ref|NP_126138.1| - 0.013 15.0 0.0 0.92 8.9 0.0 2.3 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel DHQ_synthase PF01761.20 gi|14520664|ref|NP_126139.1| - 2.3e-88 295.8 0.0 2.7e-88 295.5 0.0 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|14520664|ref|NP_126139.1| - 1.7e-05 24.6 0.0 3.7e-05 23.5 0.0 1.7 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|14520664|ref|NP_126139.1| - 0.00011 21.1 0.0 0.0013 17.6 0.0 2.2 2 1 0 2 2 2 1 Iron-containing alcohol dehydrogenase DHquinase_I PF01487.15 gi|14520665|ref|NP_126140.1| - 1.1e-51 176.4 0.0 1.2e-51 176.2 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.19 gi|14520665|ref|NP_126140.1| - 0.19 11.3 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 HMGL-like Shikimate_dh_N PF08501.11 gi|14520666|ref|NP_126141.1| - 9.1e-30 102.8 0.0 1.7e-29 101.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|14520666|ref|NP_126141.1| - 1.6e-14 53.3 0.3 4.2e-14 52.0 0.1 1.9 2 0 0 2 2 2 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|14520666|ref|NP_126141.1| - 3e-11 43.5 0.0 4.9e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|14520666|ref|NP_126141.1| - 0.00021 20.7 0.0 0.00032 20.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|14520666|ref|NP_126141.1| - 0.002 17.8 0.1 0.0033 17.1 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|14520666|ref|NP_126141.1| - 0.0024 18.2 0.0 0.0054 17.0 0.0 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DUF1188 PF06690.11 gi|14520666|ref|NP_126141.1| - 0.0027 17.3 0.1 0.011 15.4 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1188) TrkA_N PF02254.18 gi|14520666|ref|NP_126141.1| - 0.009 16.3 0.0 0.022 15.0 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|14520666|ref|NP_126141.1| - 0.0095 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FMO-like PF00743.19 gi|14520666|ref|NP_126141.1| - 0.022 13.2 0.1 0.093 11.1 0.0 1.8 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like F420_oxidored PF03807.17 gi|14520666|ref|NP_126141.1| - 0.035 14.7 0.0 0.066 13.8 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 gi|14520666|ref|NP_126141.1| - 0.047 14.1 0.0 0.072 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding PglD_N PF17836.1 gi|14520666|ref|NP_126141.1| - 0.071 13.8 0.1 0.15 12.7 0.1 1.6 1 0 0 1 1 1 0 PglD N-terminal domain DAO PF01266.24 gi|14520666|ref|NP_126141.1| - 0.074 12.6 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase DUF1512 PF07431.12 gi|14520666|ref|NP_126141.1| - 0.12 11.3 0.6 0.92 8.4 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1512) GHMP_kinases_N PF00288.26 gi|14520667|ref|NP_126142.1| - 1e-13 51.3 0.3 1e-13 51.3 0.3 2.1 3 0 0 3 3 3 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|14520667|ref|NP_126142.1| - 0.00052 20.3 0.6 0.0082 16.5 0.0 2.8 3 0 0 3 3 3 1 GHMP kinases C terminal Bmp PF02608.14 gi|14520668|ref|NP_126143.1| - 5.9e-47 160.1 0.1 1.5e-46 158.8 0.0 1.5 1 1 0 1 1 1 1 ABC transporter substrate-binding protein PnrA-like ABC_tran PF00005.27 gi|14520669|ref|NP_126144.1| - 3.6e-51 173.3 0.2 5.7e-31 107.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|14520669|ref|NP_126144.1| - 3.5e-08 33.6 1.8 0.0046 16.8 0.1 2.6 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|14520669|ref|NP_126144.1| - 0.008 15.9 0.1 0.032 14.0 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|14520669|ref|NP_126144.1| - 0.021 15.4 0.2 0.042 14.3 0.2 1.6 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|14520669|ref|NP_126144.1| - 0.04 13.8 2.0 0.1 12.5 0.1 2.4 2 1 0 2 2 2 0 RsgA GTPase AAA_22 PF13401.6 gi|14520669|ref|NP_126144.1| - 0.1 12.8 0.4 12 6.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|14520669|ref|NP_126144.1| - 0.13 11.7 0.5 12 5.3 0.0 2.7 2 1 1 3 3 3 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|14520669|ref|NP_126144.1| - 0.27 11.7 2.1 4.7 7.7 2.1 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BPD_transp_2 PF02653.16 gi|14520670|ref|NP_126145.1| - 1.3e-36 126.2 30.8 1.3e-36 126.2 30.8 2.0 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component DUF2955 PF11168.8 gi|14520670|ref|NP_126145.1| - 0.13 12.1 8.6 0.029 14.2 2.3 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2955) Phage_holin_3_3 PF16083.5 gi|14520670|ref|NP_126145.1| - 0.23 11.6 14.0 0.72 10.0 0.7 4.4 3 1 1 4 4 4 0 LydA holin phage, holin superfamily III BPD_transp_2 PF02653.16 gi|14520671|ref|NP_126146.1| - 1.3e-40 139.2 27.1 1.7e-40 138.9 27.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Romo1 PF10247.9 gi|14520671|ref|NP_126146.1| - 0.18 12.2 4.4 0.46 10.9 1.1 2.7 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 EPSP_synthase PF00275.20 gi|14520672|ref|NP_126147.1| - 6.4e-96 321.6 0.0 7.2e-96 321.4 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Chorismate_synt PF01264.21 gi|14520673|ref|NP_126148.1| - 2.2e-123 411.2 0.0 2.5e-123 411.0 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Trp_syntA PF00290.20 gi|14520674|ref|NP_126149.1| - 3.6e-80 268.6 0.0 4.6e-80 268.2 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|14520674|ref|NP_126149.1| - 2.4e-06 27.2 0.0 4.4e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein Ribul_P_3_epim PF00834.19 gi|14520674|ref|NP_126149.1| - 4.1e-05 23.0 0.0 6.3e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family BtpA PF03437.15 gi|14520674|ref|NP_126149.1| - 0.0039 16.7 0.1 0.0062 16.0 0.1 1.4 1 0 0 1 1 1 1 BtpA family PALP PF00291.25 gi|14520675|ref|NP_126150.1| - 2.5e-51 174.9 0.7 3.1e-51 174.5 0.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PRAI PF00697.22 gi|14520676|ref|NP_126151.1| - 2.9e-33 115.3 0.1 3.4e-33 115.1 0.1 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BtpA PF03437.15 gi|14520676|ref|NP_126151.1| - 0.00067 19.2 0.2 0.0054 16.2 0.0 1.9 2 0 0 2 2 2 1 BtpA family OKR_DC_1_N PF03709.15 gi|14520676|ref|NP_126151.1| - 0.0019 18.5 0.1 0.0052 17.1 0.0 1.7 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain TMP-TENI PF02581.17 gi|14520676|ref|NP_126151.1| - 0.0048 16.3 0.2 0.15 11.3 0.0 2.7 3 0 0 3 3 3 1 Thiamine monophosphate synthase PEPCK_ATP PF01293.20 gi|14520676|ref|NP_126151.1| - 0.019 13.7 0.0 0.028 13.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase ZnuA PF01297.17 gi|14520676|ref|NP_126151.1| - 0.024 14.1 0.1 0.29 10.5 0.0 2.0 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic QRPTase_C PF01729.19 gi|14520676|ref|NP_126151.1| - 0.033 14.0 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain GATase PF00117.28 gi|14520677|ref|NP_126152.1| - 5.8e-47 159.9 0.0 6.4e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|14520677|ref|NP_126152.1| - 1.6e-13 50.9 0.2 2.2e-12 47.2 0.2 2.1 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|14520678|ref|NP_126153.1| - 6.7e-97 324.1 0.0 7.5e-94 314.1 0.0 2.1 2 0 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|14520678|ref|NP_126153.1| - 8.4e-12 45.5 0.3 2.2e-09 37.7 0.1 3.2 3 0 0 3 3 3 1 Anthranilate synthase component I, N terminal region Adenosine_kin PF04008.14 gi|14520678|ref|NP_126153.1| - 0.019 14.8 0.0 0.1 12.4 0.0 2.0 2 0 0 2 2 2 0 Adenosine specific kinase HSM3_C PF18794.1 gi|14520678|ref|NP_126153.1| - 0.077 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain Glycos_transf_3 PF00591.21 gi|14520679|ref|NP_126154.1| - 1.1e-84 284.0 0.1 1.5e-84 283.6 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|14520679|ref|NP_126154.1| - 5.9e-15 54.9 1.0 1.3e-14 53.8 0.6 1.8 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain DUF1967 PF09269.11 gi|14520679|ref|NP_126154.1| - 0.29 11.1 1.0 21 5.2 0.0 3.2 4 0 0 4 4 4 0 Domain of unknown function (DUF1967) IGPS PF00218.21 gi|14520680|ref|NP_126155.1| - 2.9e-54 183.9 0.0 3.5e-54 183.7 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|14520680|ref|NP_126155.1| - 0.0067 15.9 0.0 2.1 7.8 0.0 2.2 2 0 0 2 2 2 2 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|14520680|ref|NP_126155.1| - 0.079 12.4 0.0 0.81 9.1 0.0 2.2 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator PIN_9 PF18477.1 gi|33356691|ref|NP_126156.2| - 5.9e-31 107.2 0.0 7e-31 106.9 0.0 1.0 1 0 0 1 1 1 1 PIN like domain Fcf1 PF04900.12 gi|33356691|ref|NP_126156.2| - 0.00014 22.2 0.0 0.00022 21.6 0.0 1.3 1 1 0 1 1 1 1 Fcf1 PIN_4 PF13638.6 gi|33356691|ref|NP_126156.2| - 0.00064 20.0 0.9 0.91 9.8 0.4 2.2 1 1 1 2 2 2 2 PIN domain PIN PF01850.21 gi|33356691|ref|NP_126156.2| - 0.0035 17.8 0.2 0.067 13.7 0.2 2.1 1 1 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|33356691|ref|NP_126156.2| - 0.0056 17.2 0.5 0.025 15.1 0.1 1.7 1 1 1 2 2 2 1 PIN domain PIN_10 PF18478.1 gi|33356691|ref|NP_126156.2| - 0.084 13.1 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 PIN like domain DUF384 PF04064.13 gi|33356691|ref|NP_126156.2| - 0.091 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF384) DUF836 PF05768.14 gi|33356691|ref|NP_126156.2| - 0.12 12.8 0.1 0.47 10.9 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) MAP65_ASE1 PF03999.12 gi|14520682|ref|NP_126157.1| - 0.51 9.0 4.7 0.67 8.6 4.7 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) PIEZO PF15917.5 gi|14520682|ref|NP_126157.1| - 0.88 9.0 2.8 1.3 8.5 2.8 1.2 1 0 0 1 1 1 0 Piezo eIF2_C PF09173.11 gi|14520683|ref|NP_126158.1| - 1.9e-32 111.3 0.2 5.1e-32 110.0 0.2 1.8 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 gi|14520683|ref|NP_126158.1| - 2.5e-31 108.7 0.3 1.6e-30 106.1 0.3 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|14520683|ref|NP_126158.1| - 3.4e-11 43.4 1.4 9.7e-11 41.9 1.4 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|14520683|ref|NP_126158.1| - 5.6e-05 23.2 0.0 9.4e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|14520683|ref|NP_126158.1| - 0.00022 21.2 0.1 0.0032 17.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Nop10p PF04135.12 gi|14520683|ref|NP_126158.1| - 0.00028 20.9 0.4 0.00048 20.1 0.4 1.3 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|14520683|ref|NP_126158.1| - 0.00031 20.2 0.5 0.0007 19.1 0.5 1.6 1 0 0 1 1 1 1 RecR protein zf-ribbon_3 PF13248.6 gi|14520683|ref|NP_126158.1| - 0.00055 19.3 3.2 0.0012 18.1 3.2 1.7 1 0 0 1 1 1 1 zinc-ribbon domain PolC_DP2 PF03833.13 gi|14520683|ref|NP_126158.1| - 0.00057 17.9 0.0 0.0007 17.6 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 PduV-EutP PF10662.9 gi|14520683|ref|NP_126158.1| - 0.00098 18.9 0.2 0.47 10.2 0.0 2.3 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation NRDD PF13597.6 gi|14520683|ref|NP_126158.1| - 0.0043 15.9 0.2 0.006 15.4 0.2 1.2 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase zinc_ribbon_2 PF13240.6 gi|14520683|ref|NP_126158.1| - 0.0093 15.7 5.8 0.023 14.4 5.8 1.7 1 0 0 1 1 1 1 zinc-ribbon domain DUF35_N PF12172.8 gi|14520683|ref|NP_126158.1| - 0.012 15.5 3.1 0.022 14.6 3.1 1.5 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) FeoB_N PF02421.18 gi|14520683|ref|NP_126158.1| - 0.026 14.0 0.5 5.6 6.5 0.1 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B HypA PF01155.19 gi|14520683|ref|NP_126158.1| - 0.065 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|14520683|ref|NP_126158.1| - 0.1 12.1 3.7 3 7.4 0.2 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|14520683|ref|NP_126158.1| - 0.1 12.7 1.9 9.2 6.5 0.1 2.5 1 1 1 2 2 2 0 Zinc ribbon domain G-alpha PF00503.20 gi|14520683|ref|NP_126158.1| - 0.12 11.5 0.1 0.19 10.9 0.1 1.2 1 0 0 1 1 1 0 G-protein alpha subunit zf-NADH-PPase PF09297.11 gi|14520683|ref|NP_126158.1| - 0.13 12.0 5.8 0.86 9.3 0.1 2.4 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-RING_7 PF02591.15 gi|14520683|ref|NP_126158.1| - 0.44 10.8 5.4 0.38 11.0 0.2 2.5 2 0 0 2 2 2 0 C4-type zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|14520683|ref|NP_126158.1| - 0.54 10.3 6.3 0.99 9.4 0.5 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain UPF0547 PF10571.9 gi|14520683|ref|NP_126158.1| - 5 7.3 6.1 7.9 6.7 0.9 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Radical_SAM PF04055.21 gi|14520684|ref|NP_126159.1| - 1.3e-24 87.5 0.1 7.1e-24 85.1 0.1 2.2 2 1 0 2 2 2 1 Radical SAM superfamily Wyosine_form PF08608.12 gi|14520684|ref|NP_126159.1| - 2e-23 82.5 0.0 4.6e-23 81.3 0.0 1.7 1 0 0 1 1 1 1 Wyosine base formation Fer4_12 PF13353.6 gi|14520684|ref|NP_126159.1| - 4.8e-05 23.7 0.1 0.0095 16.2 0.2 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Hydrolase PF00702.26 gi|14520684|ref|NP_126159.1| - 0.14 12.4 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF3010 PF11215.8 gi|14520684|ref|NP_126159.1| - 0.21 11.9 0.0 0.44 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) DJ-1_PfpI PF01965.24 gi|14520685|ref|NP_126160.1| - 4.3e-61 205.5 0.0 4.8e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|14520685|ref|NP_126160.1| - 0.00028 20.7 0.0 0.00061 19.6 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Catalase_C PF18011.1 gi|14520685|ref|NP_126160.1| - 0.002 17.8 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases GATase_3 PF07685.14 gi|14520685|ref|NP_126160.1| - 0.021 14.5 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|14520685|ref|NP_126160.1| - 0.13 12.0 0.0 0.28 10.9 0.0 1.6 1 1 0 1 1 1 0 Peptidase C26 FumaraseC_C PF10415.9 gi|14520685|ref|NP_126160.1| - 0.16 12.4 0.1 0.61 10.5 0.0 2.0 2 1 0 2 2 2 0 Fumarase C C-terminus DUF2154 PF09922.9 gi|14520686|ref|NP_126161.1| - 0.00015 21.6 2.6 0.0005 19.9 0.2 2.8 3 1 1 4 4 4 1 Cell wall-active antibiotics response 4TMS YvqF Bactofilin PF04519.13 gi|14520686|ref|NP_126161.1| - 0.025 14.8 0.8 0.025 14.8 0.8 2.1 2 0 0 2 2 2 0 Polymer-forming cytoskeletal CitG PF01874.16 gi|14520687|ref|NP_126162.1| - 3.2e-45 155.0 0.0 3.7e-45 154.8 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase CBFD_NFYB_HMF PF00808.23 gi|14520688|ref|NP_126163.1| - 7.5e-20 71.0 2.7 8.2e-20 70.9 2.7 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|14520688|ref|NP_126163.1| - 2.4e-09 37.6 0.6 2.6e-09 37.5 0.6 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.17 gi|14520688|ref|NP_126163.1| - 1.5e-07 31.5 1.0 1.6e-07 31.4 1.0 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 gi|14520688|ref|NP_126163.1| - 3e-06 27.5 0.1 3.3e-06 27.4 0.1 1.1 1 0 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 gi|14520688|ref|NP_126163.1| - 2.9e-05 24.1 0.1 3.2e-05 24.0 0.1 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID-18kDa PF02269.16 gi|14520688|ref|NP_126163.1| - 6.3e-05 22.9 0.1 7e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit CENP-T_C PF15511.6 gi|14520688|ref|NP_126163.1| - 0.00017 21.7 0.3 0.0002 21.4 0.3 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold DUF1931 PF09123.11 gi|14520688|ref|NP_126163.1| - 0.0023 18.1 1.0 0.0027 17.8 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) TFIID_20kDa PF03847.13 gi|14520688|ref|NP_126163.1| - 0.0029 18.1 0.3 0.0033 17.9 0.3 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 gi|14520688|ref|NP_126163.1| - 0.01 15.8 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated Radical_SAM PF04055.21 gi|14520689|ref|NP_126164.1| - 9.4e-27 94.4 0.1 1.9e-25 90.1 0.0 2.3 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|14520689|ref|NP_126164.1| - 7e-13 48.7 0.1 1.5e-12 47.6 0.1 1.5 1 0 0 1 1 1 1 B12 binding domain Toprim PF01751.22 gi|14520690|ref|NP_126165.1| - 2.2e-08 34.2 0.1 2.1e-07 31.1 0.1 2.1 1 1 0 1 1 1 1 Toprim domain Toprim_4 PF13662.6 gi|14520690|ref|NP_126165.1| - 1.6e-05 25.3 0.0 3.6e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|14520690|ref|NP_126165.1| - 2.5e-05 24.6 0.2 7e-05 23.2 0.0 1.7 2 0 0 2 2 2 1 Toprim-like Toprim_3 PF13362.6 gi|14520690|ref|NP_126165.1| - 5.1e-05 23.5 0.0 6.6e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Toprim domain Toprim_4 PF13662.6 gi|14520691|ref|NP_126166.1| - 1e-13 51.6 0.4 3.3e-13 49.9 0.4 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|14520691|ref|NP_126166.1| - 1.6e-06 28.4 0.0 6.1e-06 26.6 0.0 2.0 2 0 0 2 2 2 1 Toprim-like Toprim PF01751.22 gi|14520691|ref|NP_126166.1| - 0.0017 18.6 2.8 0.002 18.3 0.3 2.6 2 2 0 2 2 2 1 Toprim domain NTP_transferase PF00483.23 gi|14520692|ref|NP_126167.1| - 2.2e-51 174.9 0.0 3.1e-51 174.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|14520692|ref|NP_126167.1| - 2.7e-24 83.9 20.6 1.6e-09 37.1 2.8 4.2 1 1 3 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|14520692|ref|NP_126167.1| - 2.5e-09 37.7 0.0 3.2e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|14520692|ref|NP_126167.1| - 7.3e-05 21.1 0.3 0.00011 20.6 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 gi|14520692|ref|NP_126167.1| - 0.029 14.1 5.0 0.029 14.1 5.0 4.3 3 2 1 4 4 4 0 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|14520692|ref|NP_126167.1| - 0.031 13.2 0.1 7.1 5.4 0.2 2.8 2 1 0 2 2 2 0 L-fucokinase CTP_transf_3 PF02348.19 gi|14520692|ref|NP_126167.1| - 0.042 13.8 0.0 0.098 12.6 0.1 1.5 2 0 0 2 2 2 0 Cytidylyltransferase PGM_PMM_I PF02878.16 gi|14520693|ref|NP_126168.1| - 1.1e-06 28.4 0.0 2.1e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|14520693|ref|NP_126168.1| - 0.039 14.6 0.0 0.083 13.5 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thymidylate_kin PF02223.17 gi|14520694|ref|NP_126169.1| - 1.7e-54 184.3 0.0 2e-54 184.1 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 gi|14520694|ref|NP_126169.1| - 6.3e-07 29.8 0.0 8.4e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|14520694|ref|NP_126169.1| - 2e-06 27.8 0.0 0.00011 22.2 0.0 2.1 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|14520694|ref|NP_126169.1| - 6.5e-06 26.7 0.0 1.1e-05 25.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|14520694|ref|NP_126169.1| - 0.00068 19.8 0.0 0.00096 19.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14520694|ref|NP_126169.1| - 0.0017 18.6 0.0 0.0031 17.8 0.0 1.6 1 1 1 2 2 2 1 AAA domain SRP54 PF00448.22 gi|14520694|ref|NP_126169.1| - 0.002 17.8 0.0 0.0043 16.7 0.0 1.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain KTI12 PF08433.10 gi|14520694|ref|NP_126169.1| - 0.004 16.7 0.0 0.011 15.2 0.0 1.7 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_17 PF13207.6 gi|14520694|ref|NP_126169.1| - 0.01 16.3 0.0 0.023 15.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|14520694|ref|NP_126169.1| - 0.015 15.0 0.0 0.031 14.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|14520694|ref|NP_126169.1| - 0.03 14.3 0.0 0.1 12.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) SKI PF01202.22 gi|14520694|ref|NP_126169.1| - 0.032 14.3 0.1 3.5 7.7 0.1 2.2 2 0 0 2 2 2 0 Shikimate kinase CbiA PF01656.23 gi|14520694|ref|NP_126169.1| - 0.057 13.5 0.0 0.064 13.3 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TilS PF09179.11 gi|14520694|ref|NP_126169.1| - 0.098 13.2 0.0 11 6.6 0.0 2.4 2 0 0 2 2 2 0 TilS substrate binding domain SRP54 PF00448.22 gi|14520695|ref|NP_126170.1| - 2.1e-76 255.9 0.0 3.8e-76 255.1 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|14520695|ref|NP_126170.1| - 8.7e-34 116.1 1.0 2.9e-33 114.4 0.6 2.1 2 0 0 2 2 1 1 Signal peptide binding domain SRP54_N PF02881.19 gi|14520695|ref|NP_126170.1| - 1.1e-19 70.4 2.5 1.1e-19 70.4 2.5 2.7 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain MeaB PF03308.16 gi|14520695|ref|NP_126170.1| - 1.6e-06 27.3 0.1 0.0004 19.5 0.1 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 gi|14520695|ref|NP_126170.1| - 2.1e-06 28.1 0.0 8.8e-06 26.0 0.0 2.0 2 0 0 2 2 1 1 AAA domain Zeta_toxin PF06414.12 gi|14520695|ref|NP_126170.1| - 3.6e-06 26.4 0.0 7.4e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin CbiA PF01656.23 gi|14520695|ref|NP_126170.1| - 9.6e-06 25.7 0.0 2.8e-05 24.2 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 gi|14520695|ref|NP_126170.1| - 1.2e-05 25.2 0.9 5.5e-05 23.1 0.1 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 gi|14520695|ref|NP_126170.1| - 3.6e-05 24.2 0.9 0.00011 22.7 0.1 2.1 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|14520695|ref|NP_126170.1| - 8.1e-05 22.3 1.4 0.0093 15.6 1.4 2.4 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|14520695|ref|NP_126170.1| - 0.00012 22.5 0.0 0.00036 21.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|14520695|ref|NP_126170.1| - 0.00016 21.9 0.0 0.00036 20.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain LpxK PF02606.14 gi|14520695|ref|NP_126170.1| - 0.00033 19.9 0.6 0.0028 16.8 0.2 2.2 2 1 0 2 2 2 1 Tetraacyldisaccharide-1-P 4'-kinase ATP_bind_1 PF03029.17 gi|14520695|ref|NP_126170.1| - 0.00044 20.1 0.1 0.0015 18.4 0.1 1.9 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|14520695|ref|NP_126170.1| - 0.00059 19.6 0.2 0.0019 18.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain Glyco_transf_4 PF13439.6 gi|14520695|ref|NP_126170.1| - 0.00063 19.8 0.1 0.0047 16.9 0.0 2.2 2 0 0 2 2 2 1 Glycosyltransferase Family 4 SRPRB PF09439.10 gi|14520695|ref|NP_126170.1| - 0.0051 16.3 0.3 2 7.8 0.1 2.5 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit NTPase_1 PF03266.15 gi|14520695|ref|NP_126170.1| - 0.0052 16.7 1.3 0.011 15.6 0.1 2.1 2 0 0 2 2 2 1 NTPase KTI12 PF08433.10 gi|14520695|ref|NP_126170.1| - 0.0059 16.1 0.5 0.017 14.6 0.0 1.9 2 0 0 2 2 2 1 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 gi|14520695|ref|NP_126170.1| - 0.0063 16.2 1.3 0.016 14.9 0.1 2.2 2 0 0 2 2 2 1 Thymidylate kinase ParA PF10609.9 gi|14520695|ref|NP_126170.1| - 0.0066 15.9 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ResIII PF04851.15 gi|14520695|ref|NP_126170.1| - 0.0095 16.0 0.8 0.039 13.9 0.7 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit APS_kinase PF01583.20 gi|14520695|ref|NP_126170.1| - 0.0095 15.8 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 gi|14520695|ref|NP_126170.1| - 0.013 16.0 0.1 0.054 14.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|14520695|ref|NP_126170.1| - 0.013 14.4 0.0 0.025 13.5 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain IMPDH PF00478.25 gi|14520695|ref|NP_126170.1| - 0.013 14.5 0.4 0.025 13.6 0.4 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain G-alpha PF00503.20 gi|14520695|ref|NP_126170.1| - 0.015 14.5 0.3 0.28 10.3 0.0 2.5 2 1 0 3 3 3 0 G-protein alpha subunit MMR_HSR1 PF01926.23 gi|14520695|ref|NP_126170.1| - 0.017 15.2 1.0 0.093 12.8 0.4 2.6 2 1 0 2 2 1 0 50S ribosome-binding GTPase AAA_31 PF13614.6 gi|14520695|ref|NP_126170.1| - 0.023 14.6 0.1 0.085 12.8 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|14520695|ref|NP_126170.1| - 0.025 15.0 0.7 0.27 11.7 0.2 3.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|14520695|ref|NP_126170.1| - 0.028 14.3 0.1 0.089 12.7 0.1 1.9 2 0 0 2 2 1 0 NACHT domain YjeF_N PF03853.15 gi|14520695|ref|NP_126170.1| - 0.029 14.2 0.7 0.31 10.9 0.1 2.6 2 1 0 2 2 1 0 YjeF-related protein N-terminus AAA_7 PF12775.7 gi|14520695|ref|NP_126170.1| - 0.032 13.8 0.0 0.062 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 gi|14520695|ref|NP_126170.1| - 0.039 14.0 0.0 0.14 12.1 0.0 2.0 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 gi|14520695|ref|NP_126170.1| - 0.044 14.0 0.0 0.13 12.5 0.0 1.8 2 0 0 2 2 1 0 AAA domain 6PF2K PF01591.18 gi|14520695|ref|NP_126170.1| - 0.053 12.8 0.0 0.11 11.7 0.0 1.6 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF86 PF01934.17 gi|14520695|ref|NP_126170.1| - 0.057 13.3 0.9 0.15 11.9 0.1 2.1 2 0 0 2 2 1 0 Protein of unknown function DUF86 PFOR_II PF17147.4 gi|14520695|ref|NP_126170.1| - 0.059 13.7 0.9 1 9.7 0.0 3.1 3 1 1 4 4 4 0 Pyruvate:ferredoxin oxidoreductase core domain II TsaE PF02367.17 gi|14520695|ref|NP_126170.1| - 0.062 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_26 PF13500.6 gi|14520695|ref|NP_126170.1| - 0.07 12.9 1.3 0.36 10.6 1.3 2.2 1 1 0 1 1 1 0 AAA domain Glyco_trans_4_4 PF13579.6 gi|14520695|ref|NP_126170.1| - 0.071 13.5 0.0 0.85 10.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain Rad17 PF03215.15 gi|14520695|ref|NP_126170.1| - 0.082 12.8 0.6 0.18 11.7 0.1 1.8 2 0 0 2 2 1 0 Rad17 P-loop domain MipZ PF09140.11 gi|14520695|ref|NP_126170.1| - 0.082 12.2 0.4 5.7 6.2 0.4 2.4 1 1 0 1 1 1 0 ATPase MipZ TK PF00265.18 gi|14520695|ref|NP_126170.1| - 0.11 12.4 0.0 0.24 11.3 0.0 1.6 1 1 0 1 1 1 0 Thymidine kinase AAA_19 PF13245.6 gi|14520695|ref|NP_126170.1| - 0.11 12.8 0.4 0.32 11.3 0.4 1.9 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|14520695|ref|NP_126170.1| - 0.12 12.7 0.0 0.51 10.8 0.0 2.1 1 1 0 1 1 1 0 RNA helicase Thioredoxin_15 PF18403.1 gi|14520695|ref|NP_126170.1| - 0.12 12.2 0.4 0.87 9.5 0.0 2.3 2 1 0 2 2 2 0 Thioredoxin-like domain Mod_r PF07200.13 gi|14520695|ref|NP_126170.1| - 1.4 9.1 4.6 11 6.1 0.2 2.6 3 0 0 3 3 2 0 Modifier of rudimentary (Mod(r)) protein AsnC_trans_reg PF01037.21 gi|14520696|ref|NP_126171.1| - 5.3e-14 51.9 0.0 5.8e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain CxxCxxCC PF03692.15 gi|14520697|ref|NP_126172.1| - 2.5e-20 73.0 1.6 3.1e-20 72.6 1.6 1.1 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF3109 PF11307.8 gi|14520697|ref|NP_126172.1| - 0.048 13.5 6.0 12 5.7 6.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3109) HTH_24 PF13412.6 gi|14520698|ref|NP_126173.1| - 1e-16 60.2 0.9 1.7e-16 59.5 0.9 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|14520698|ref|NP_126173.1| - 3.3e-15 55.8 0.2 4.8e-15 55.3 0.2 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|14520698|ref|NP_126173.1| - 1.2e-14 53.9 0.0 1.7e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|14520698|ref|NP_126173.1| - 1.5e-08 34.5 0.1 3.1e-08 33.4 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 gi|14520698|ref|NP_126173.1| - 2.1e-07 30.5 0.1 4.5e-07 29.5 0.0 1.6 2 0 0 2 2 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|14520698|ref|NP_126173.1| - 1.6e-05 24.9 0.0 3.2e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|14520698|ref|NP_126173.1| - 0.00011 21.8 0.2 0.00072 19.2 0.1 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|14520698|ref|NP_126173.1| - 0.00023 20.8 1.7 0.00061 19.5 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|14520698|ref|NP_126173.1| - 0.00028 21.0 0.1 0.00044 20.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|14520698|ref|NP_126173.1| - 0.00039 20.2 0.1 0.00081 19.2 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|14520698|ref|NP_126173.1| - 0.00044 20.2 0.0 0.00067 19.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.11 gi|14520698|ref|NP_126173.1| - 0.0012 18.8 0.1 0.002 18.1 0.1 1.3 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_5 PF01022.20 gi|14520698|ref|NP_126173.1| - 0.0015 18.3 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|14520698|ref|NP_126173.1| - 0.0024 17.8 0.0 0.0047 16.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_41 PF14502.6 gi|14520698|ref|NP_126173.1| - 0.0026 17.4 0.2 0.0082 15.8 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|14520698|ref|NP_126173.1| - 0.0047 16.6 0.0 0.0092 15.7 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 gi|14520698|ref|NP_126173.1| - 0.0068 16.3 0.1 0.016 15.2 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain GYD PF08734.11 gi|14520698|ref|NP_126173.1| - 0.0095 15.9 0.1 0.016 15.2 0.1 1.4 1 0 0 1 1 1 1 GYD domain TetR_N PF00440.23 gi|14520698|ref|NP_126173.1| - 0.011 15.5 0.3 0.022 14.6 0.1 1.6 2 0 0 2 2 1 0 Bacterial regulatory proteins, tetR family HTH_30 PF13556.6 gi|14520698|ref|NP_126173.1| - 0.015 15.1 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_29 PF13551.6 gi|14520698|ref|NP_126173.1| - 0.017 15.1 0.0 0.031 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Dabb PF07876.12 gi|14520698|ref|NP_126173.1| - 0.02 15.5 0.0 0.03 15.0 0.0 1.4 1 1 0 1 1 1 0 Stress responsive A/B Barrel Domain HTH_Crp_2 PF13545.6 gi|14520698|ref|NP_126173.1| - 0.021 14.8 0.0 0.038 14.0 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Trp_repressor PF01371.19 gi|14520698|ref|NP_126173.1| - 0.022 14.9 0.1 0.45 10.7 0.1 2.2 2 0 0 2 2 2 0 Trp repressor protein HTH_7 PF02796.15 gi|14520698|ref|NP_126173.1| - 0.023 14.8 0.1 0.063 13.4 0.1 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain of resolvase Mga PF05043.13 gi|14520698|ref|NP_126173.1| - 0.024 15.2 0.1 0.042 14.4 0.1 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_50 PF18024.1 gi|14520698|ref|NP_126173.1| - 0.024 14.2 0.0 0.045 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|14520698|ref|NP_126173.1| - 0.027 14.9 0.4 0.052 14.0 0.4 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 gi|14520698|ref|NP_126173.1| - 0.037 13.0 0.0 0.055 12.4 0.0 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_12 PF08461.10 gi|14520698|ref|NP_126173.1| - 0.042 13.8 1.2 0.1 12.5 0.5 2.0 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain FUR PF01475.19 gi|14520698|ref|NP_126173.1| - 0.045 13.9 0.1 0.073 13.2 0.1 1.5 1 1 0 1 1 1 0 Ferric uptake regulator family HrcA_DNA-bdg PF03444.15 gi|14520698|ref|NP_126173.1| - 0.068 12.8 0.1 0.15 11.7 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding GntR PF00392.21 gi|14520698|ref|NP_126173.1| - 0.068 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|14520698|ref|NP_126173.1| - 0.07 12.9 0.3 0.2 11.5 0.1 1.8 2 0 0 2 2 2 0 HTH DNA binding domain Fe_dep_repress PF01325.19 gi|14520698|ref|NP_126173.1| - 0.072 13.3 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain NUMOD1 PF07453.13 gi|14520698|ref|NP_126173.1| - 0.092 13.0 0.3 1.5 9.1 0.1 2.4 2 0 0 2 2 2 0 NUMOD1 domain PadR PF03551.14 gi|14520698|ref|NP_126173.1| - 0.098 12.6 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family MarR_2 PF12802.7 gi|14520698|ref|NP_126173.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 MarR family AsnC_trans_reg2 PF17805.1 gi|14520698|ref|NP_126173.1| - 0.13 12.4 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 AsnC-like ligand binding domain Pribosyltran PF00156.27 gi|14520699|ref|NP_126174.1| - 6.7e-11 42.0 0.2 1e-10 41.4 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_3 PF01381.22 gi|14520699|ref|NP_126174.1| - 1.4e-09 37.8 0.7 8.9e-09 35.3 0.3 2.4 3 0 0 3 3 3 1 Helix-turn-helix HTH_26 PF13443.6 gi|14520699|ref|NP_126174.1| - 0.11 12.9 0.0 0.25 11.8 0.0 1.6 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain tRNA-synt_1c PF00749.21 gi|14520700|ref|NP_126175.1| - 1.3e-87 293.7 0.0 1.8e-87 293.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|14520700|ref|NP_126175.1| - 2.9e-32 111.9 0.0 6.5e-32 110.8 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain EcoR124_C PF12008.8 gi|14520700|ref|NP_126175.1| - 0.012 15.3 0.6 0.021 14.5 0.6 1.3 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal CitMHS PF03600.16 gi|14520702|ref|NP_126177.1| - 3.4e-17 62.6 35.7 3.7e-17 62.5 28.3 2.9 1 1 1 2 2 2 2 Citrate transporter Fumerase_C PF05683.12 gi|14520703|ref|NP_126178.1| - 1.9e-37 128.6 0.0 2.1e-37 128.4 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus FliMN_C PF01052.20 gi|14520703|ref|NP_126178.1| - 0.052 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Type III flagellar switch regulator (C-ring) FliN C-term NTP_transferase PF00483.23 gi|14520703|ref|NP_126178.1| - 0.078 12.5 0.0 0.079 12.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase Fumerase PF05681.14 gi|14520704|ref|NP_126179.1| - 3.3e-84 282.5 0.2 3.7e-84 282.3 0.2 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) C-C_Bond_Lyase PF15617.6 gi|14520704|ref|NP_126179.1| - 0.052 12.7 0.1 0.069 12.3 0.1 1.1 1 0 0 1 1 1 0 C-C_Bond_Lyase of the TIM-Barrel fold GCH_III PF05165.12 gi|14520704|ref|NP_126179.1| - 0.071 12.4 0.1 0.74 9.0 0.0 2.0 2 0 0 2 2 2 0 GTP cyclohydrolase III adh_short PF00106.25 gi|14520705|ref|NP_126180.1| - 1.5e-36 125.7 0.0 1.9e-36 125.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|14520705|ref|NP_126180.1| - 5.2e-25 88.4 0.0 6.3e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 gi|14520705|ref|NP_126180.1| - 2.5e-08 33.7 0.0 7.7e-08 32.1 0.0 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|14520705|ref|NP_126180.1| - 9.1e-07 28.9 0.0 1.1e-06 28.6 0.0 1.4 1 1 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|14520705|ref|NP_126180.1| - 2.4e-05 23.6 0.0 4.6e-05 22.7 0.0 1.5 2 0 0 2 2 2 1 RmlD substrate binding domain KR PF08659.10 gi|14520705|ref|NP_126180.1| - 4.6e-05 23.4 0.0 9.3e-05 22.4 0.0 1.5 1 1 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 gi|14520705|ref|NP_126180.1| - 0.0017 17.9 0.2 0.0062 16.0 0.1 1.9 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase DFP PF04127.15 gi|14520705|ref|NP_126180.1| - 0.0055 16.6 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein TrkA_N PF02254.18 gi|14520705|ref|NP_126180.1| - 0.016 15.4 0.1 0.037 14.3 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox PF00070.27 gi|14520705|ref|NP_126180.1| - 0.018 15.6 0.3 4.1 8.0 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Polysacc_synt_2 PF02719.15 gi|14520705|ref|NP_126180.1| - 0.018 14.2 0.2 0.026 13.7 0.2 1.3 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein MGS PF02142.22 gi|14520705|ref|NP_126180.1| - 0.024 14.8 0.0 0.074 13.2 0.0 1.7 2 0 0 2 2 2 0 MGS-like domain F420_oxidored PF03807.17 gi|14520705|ref|NP_126180.1| - 0.035 14.7 0.1 0.08 13.5 0.1 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|14520705|ref|NP_126180.1| - 0.059 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|14520705|ref|NP_126180.1| - 0.061 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ThiF PF00899.21 gi|14520705|ref|NP_126180.1| - 0.079 12.3 0.1 0.14 11.5 0.1 1.3 1 0 0 1 1 1 0 ThiF family NAD_binding_2 PF03446.15 gi|14520705|ref|NP_126180.1| - 0.086 13.0 0.0 0.36 11.0 0.0 1.9 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase ADH_zinc_N PF00107.26 gi|14520705|ref|NP_126180.1| - 0.11 12.5 0.0 0.28 11.2 0.0 1.7 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Shikimate_DH PF01488.20 gi|14520705|ref|NP_126180.1| - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NmrA PF05368.13 gi|14520705|ref|NP_126180.1| - 0.15 11.6 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family LytR_C PF13399.6 gi|14520705|ref|NP_126180.1| - 0.16 13.0 0.0 4 8.5 0.0 2.2 2 0 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator RsgA_GTPase PF03193.16 gi|14520705|ref|NP_126180.1| - 0.17 11.8 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase YbjQ_1 PF01906.17 gi|14520706|ref|NP_126181.1| - 8e-37 126.1 4.5 9.1e-37 125.9 4.5 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding YhfC PF10086.9 gi|14520707|ref|NP_126182.1| - 0.00079 18.9 9.1 0.00079 18.9 9.1 2.2 1 1 1 2 2 2 2 YhfC intramembrane metalloprotease PadR PF03551.14 gi|14520708|ref|NP_126183.1| - 6.9e-21 74.0 1.8 1e-20 73.5 1.8 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|14520708|ref|NP_126183.1| - 0.00014 22.0 0.2 0.0012 18.9 0.2 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain DUF505 PF04458.12 gi|14520708|ref|NP_126183.1| - 0.00022 19.7 0.5 0.00028 19.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HTH_45 PF14947.6 gi|14520708|ref|NP_126183.1| - 0.025 14.6 0.9 0.13 12.3 0.6 2.2 1 1 1 2 2 2 0 Winged helix-turn-helix HxlR PF01638.17 gi|14520708|ref|NP_126183.1| - 0.054 13.4 0.2 0.073 12.9 0.2 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Replic_Relax PF13814.6 gi|14520708|ref|NP_126183.1| - 0.08 13.0 0.1 0.2 11.7 0.1 1.7 1 1 0 1 1 1 0 Replication-relaxation ATP_bind_3 PF01171.20 gi|14520709|ref|NP_126184.1| - 3e-15 56.5 0.0 8.4e-15 55.0 0.0 1.7 1 1 0 1 1 1 1 PP-loop family Asn_synthase PF00733.21 gi|14520709|ref|NP_126184.1| - 6.9e-05 22.7 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase zn-ribbon_14 PF16503.5 gi|14520709|ref|NP_126184.1| - 0.00039 19.9 3.0 0.00039 19.9 3.0 2.9 3 0 0 3 3 3 1 Zinc-ribbon PAPS_reduct PF01507.19 gi|14520709|ref|NP_126184.1| - 0.00052 20.1 0.0 0.0023 18.0 0.0 2.2 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|14520709|ref|NP_126184.1| - 0.0053 16.3 0.5 0.019 14.5 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC CTU2 PF10288.9 gi|14520709|ref|NP_126184.1| - 0.016 15.4 0.2 0.53 10.5 0.2 2.6 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 tRNA_Me_trans PF03054.16 gi|14520709|ref|NP_126184.1| - 0.051 12.4 0.1 0.11 11.3 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase SopA PF13981.6 gi|14520709|ref|NP_126184.1| - 0.055 13.9 0.0 0.093 13.2 0.0 1.3 1 0 0 1 1 1 0 SopA-like central domain C1_2 PF03107.16 gi|14520709|ref|NP_126184.1| - 0.25 11.7 0.2 0.25 11.7 0.2 2.8 3 0 0 3 3 3 0 C1 domain C5HCH PF17982.1 gi|14520709|ref|NP_126184.1| - 2.5 8.3 7.7 0.81 9.9 0.3 2.5 2 0 0 2 2 2 0 NSD Cys-His rich domain RecR PF02132.15 gi|14520709|ref|NP_126184.1| - 2.6 7.7 10.2 0.093 12.3 1.6 2.7 3 0 0 3 3 3 0 RecR protein TrkA_C PF02080.21 gi|14520710|ref|NP_126185.1| - 8.1e-14 51.2 0.0 1.5e-13 50.3 0.0 1.5 1 0 0 1 1 1 1 TrkA-C domain DUF5381 PF17353.2 gi|14520710|ref|NP_126185.1| - 0.054 13.2 0.9 0.11 12.3 0.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Castor_Poll_mid PF06241.12 gi|14520710|ref|NP_126185.1| - 0.065 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Castor and Pollux, part of voltage-gated ion channel HTH_20 PF12840.7 gi|14520710|ref|NP_126185.1| - 0.075 13.1 0.2 0.22 11.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Ion_trans_2 PF07885.16 gi|14520711|ref|NP_126186.1| - 3.9e-13 49.1 9.0 7.7e-13 48.2 9.0 1.5 1 0 0 1 1 1 1 Ion channel zf-C3Hc3H PF13891.6 gi|14520711|ref|NP_126186.1| - 0.006 16.9 0.1 0.01 16.2 0.1 1.3 1 0 0 1 1 1 1 Potential DNA-binding domain zf-TRM13_CCCH PF11722.8 gi|14520711|ref|NP_126186.1| - 0.041 13.7 1.0 0.086 12.6 1.0 1.5 1 0 0 1 1 1 0 CCCH zinc finger in TRM13 protein IRK PF01007.20 gi|14520711|ref|NP_126186.1| - 0.051 13.4 0.5 0.09 12.6 0.5 1.5 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain NAD_kinase PF01513.21 gi|14520712|ref|NP_126187.1| - 1.5e-48 165.5 0.1 1.7e-48 165.3 0.1 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|14520712|ref|NP_126187.1| - 9.6e-07 28.5 0.2 3.6e-06 26.6 0.0 2.1 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain RRM_9 PF18444.1 gi|14520712|ref|NP_126187.1| - 0.097 12.5 0.0 0.3 11.0 0.0 1.8 1 0 0 1 1 1 0 RNA recognition motif CbiN PF02553.15 gi|14520712|ref|NP_126187.1| - 0.16 12.0 0.0 33 4.5 0.0 2.8 2 0 0 2 2 2 0 Cobalt transport protein component CbiN HEPN PF05168.14 gi|14520713|ref|NP_126188.1| - 0.021 15.0 2.9 0.56 10.4 0.2 3.0 3 0 0 3 3 3 0 HEPN domain CW_binding_2 PF04122.12 gi|14520713|ref|NP_126188.1| - 0.081 13.6 1.1 10 6.9 0.2 3.2 3 0 0 3 3 3 0 Putative cell wall binding repeat 2 DUF4148 PF13663.6 gi|14520713|ref|NP_126188.1| - 0.33 11.2 1.2 0.86 9.8 1.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) SMBP PF16785.5 gi|14520713|ref|NP_126188.1| - 0.59 10.4 3.8 0.31 11.3 1.1 1.9 2 0 0 2 2 2 0 Small metal-binding protein CaM_bdg_C0 PF10562.9 gi|14520713|ref|NP_126188.1| - 0.64 10.1 2.7 15 5.7 0.1 2.5 2 0 0 2 2 2 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit DUF1771 PF08590.10 gi|14520714|ref|NP_126189.1| - 6.4e-07 29.7 0.5 0.02 15.3 0.0 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF1771) CW_binding_2 PF04122.12 gi|14520714|ref|NP_126189.1| - 0.0002 21.9 0.2 0.27 11.9 0.3 2.9 2 1 0 2 2 2 2 Putative cell wall binding repeat 2 DUF4363 PF14276.6 gi|14520714|ref|NP_126189.1| - 0.0046 17.1 0.5 0.098 12.8 0.1 2.5 2 1 0 2 2 2 1 Domain of unknown function (DUF4363) Mitofilin PF09731.9 gi|14520714|ref|NP_126189.1| - 0.012 14.5 0.1 0.019 13.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ANAPC3 PF12895.7 gi|14520714|ref|NP_126189.1| - 0.019 15.2 0.1 2.1 8.6 0.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 CD225 PF04505.12 gi|14520714|ref|NP_126189.1| - 0.037 14.2 0.7 7.8 6.7 0.1 2.4 2 0 0 2 2 2 0 Interferon-induced transmembrane protein PTS_IIA PF02255.16 gi|14520714|ref|NP_126189.1| - 0.042 13.9 0.8 0.9 9.6 0.0 2.7 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF4398 PF14346.6 gi|14520714|ref|NP_126189.1| - 0.051 14.2 3.3 2.4 8.8 0.8 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4398) TPR_2 PF07719.17 gi|14520714|ref|NP_126189.1| - 0.09 12.9 4.8 0.16 12.1 0.5 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat Dehalogenase PF13486.6 gi|14520714|ref|NP_126189.1| - 0.14 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Reductive dehalogenase subunit YfdX PF10938.8 gi|14520714|ref|NP_126189.1| - 0.15 11.9 2.2 0.19 11.7 0.1 2.1 2 1 0 2 2 2 0 YfdX protein HEPN PF05168.14 gi|14520714|ref|NP_126189.1| - 1.2 9.3 5.1 6.5 6.9 0.4 3.5 3 0 0 3 3 3 0 HEPN domain TPR_1 PF00515.28 gi|14520714|ref|NP_126189.1| - 4.4 7.3 4.9 1 9.3 0.6 2.3 2 1 0 3 3 3 0 Tetratricopeptide repeat TGS PF02824.21 gi|14520715|ref|NP_126190.1| - 3e-24 84.8 0.0 1.7e-22 79.2 0.0 2.4 2 0 0 2 2 2 1 TGS domain MMR_HSR1 PF01926.23 gi|14520715|ref|NP_126190.1| - 3.3e-22 78.7 0.0 9.3e-22 77.3 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 gi|14520715|ref|NP_126190.1| - 5.8e-20 71.3 0.5 1.1e-19 70.4 0.5 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|14520715|ref|NP_126190.1| - 9.9e-10 38.2 0.0 5.4e-09 35.8 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B MMR_HSR1_C PF08438.10 gi|14520715|ref|NP_126190.1| - 0.00077 20.0 0.0 0.0026 18.3 0.0 1.9 1 1 0 1 1 1 1 GTPase of unknown function C-terminal YchF-GTPase_C PF06071.13 gi|14520715|ref|NP_126190.1| - 0.001 19.2 0.0 0.11 12.7 0.0 2.6 1 1 1 2 2 2 1 Protein of unknown function (DUF933) Dus PF01207.17 gi|14520715|ref|NP_126190.1| - 0.0031 16.7 1.2 0.41 9.7 0.3 2.2 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) Arf PF00025.21 gi|14520715|ref|NP_126190.1| - 0.015 14.7 0.1 0.25 10.8 0.0 2.5 2 1 1 3 3 3 0 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|14520715|ref|NP_126190.1| - 0.037 13.9 1.1 7.3 6.5 0.0 2.8 3 0 0 3 3 3 0 RsgA GTPase SRPRB PF09439.10 gi|14520715|ref|NP_126190.1| - 0.051 13.0 0.1 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Myb_DNA-bind_4 PF13837.6 gi|14520715|ref|NP_126190.1| - 0.4 11.1 2.6 17 5.9 0.5 2.7 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain Lactamase_B_3 PF13483.6 gi|14520716|ref|NP_126191.1| - 1.2e-32 113.1 0.0 1.5e-32 112.8 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|14520716|ref|NP_126191.1| - 1.9e-24 86.3 0.0 2.4e-24 86.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14520716|ref|NP_126191.1| - 3.8e-13 49.9 1.8 1.1e-12 48.3 1.8 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_5 PF14597.6 gi|14520716|ref|NP_126191.1| - 0.017 14.6 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF167 PF02594.16 gi|14520717|ref|NP_126192.1| - 1.1e-23 83.1 0.5 1.3e-23 82.9 0.5 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 SRP54 PF00448.22 gi|14520718|ref|NP_126193.1| - 1.4e-80 269.6 0.1 2.3e-80 268.9 0.1 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|14520718|ref|NP_126193.1| - 1.2e-09 38.2 11.9 1.2e-09 38.2 11.9 2.6 1 1 1 2 2 2 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|14520718|ref|NP_126193.1| - 3e-09 36.9 0.5 5e-09 36.2 0.5 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|14520718|ref|NP_126193.1| - 1.9e-07 30.5 0.0 4.5e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|14520718|ref|NP_126193.1| - 5.8e-07 29.8 0.1 1.3e-06 28.7 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14520718|ref|NP_126193.1| - 2.4e-06 27.9 0.1 1.8e-05 25.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|14520718|ref|NP_126193.1| - 4.7e-06 26.3 1.6 8.2e-06 25.5 0.1 2.0 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.6 gi|14520718|ref|NP_126193.1| - 6.9e-06 26.5 6.9 9.4e-06 26.1 0.1 2.5 2 1 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|14520718|ref|NP_126193.1| - 1.7e-05 23.9 1.5 2.3e-05 23.5 0.1 2.0 2 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|14520718|ref|NP_126193.1| - 2.7e-05 24.1 2.3 0.0018 18.2 0.1 2.6 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Thymidylate_kin PF02223.17 gi|14520718|ref|NP_126193.1| - 6.9e-05 22.6 1.8 0.0011 18.7 0.0 2.5 2 0 0 2 2 2 1 Thymidylate kinase NTPase_1 PF03266.15 gi|14520718|ref|NP_126193.1| - 0.00013 21.9 5.5 0.13 12.2 0.2 3.2 1 1 2 3 3 3 2 NTPase KdpD PF02702.17 gi|14520718|ref|NP_126193.1| - 0.00017 21.1 3.1 0.0019 17.7 0.1 2.7 2 1 0 2 2 2 1 Osmosensitive K+ channel His kinase sensor domain VirC1 PF07015.11 gi|14520718|ref|NP_126193.1| - 0.0003 20.2 0.0 0.00058 19.2 0.0 1.4 1 0 0 1 1 1 1 VirC1 protein AAA_16 PF13191.6 gi|14520718|ref|NP_126193.1| - 0.00037 20.9 0.1 0.001 19.5 0.0 1.8 1 1 1 2 2 2 1 AAA ATPase domain CbiA PF01656.23 gi|14520718|ref|NP_126193.1| - 0.00052 20.1 3.9 0.00098 19.2 0.6 2.8 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fe-ADH PF00465.19 gi|14520718|ref|NP_126193.1| - 0.00062 18.7 0.4 0.059 12.2 0.1 2.5 2 1 1 3 3 3 1 Iron-containing alcohol dehydrogenase APS_kinase PF01583.20 gi|14520718|ref|NP_126193.1| - 0.00065 19.6 0.1 0.0022 17.9 0.0 1.9 2 0 0 2 2 2 1 Adenylylsulphate kinase MMR_HSR1 PF01926.23 gi|14520718|ref|NP_126193.1| - 0.0009 19.3 6.1 0.0091 16.1 0.6 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Peripla_BP_4 PF13407.6 gi|14520718|ref|NP_126193.1| - 0.0012 18.5 9.2 0.094 12.3 0.2 3.6 2 1 2 4 4 4 2 Periplasmic binding protein domain RsgA_GTPase PF03193.16 gi|14520718|ref|NP_126193.1| - 0.002 18.0 0.9 0.3 11.0 0.1 3.4 1 1 3 4 4 4 1 RsgA GTPase AAA_19 PF13245.6 gi|14520718|ref|NP_126193.1| - 0.0021 18.4 0.1 0.0053 17.1 0.1 1.7 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|14520718|ref|NP_126193.1| - 0.0025 17.1 0.9 0.0038 16.5 0.1 1.7 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) KTI12 PF08433.10 gi|14520718|ref|NP_126193.1| - 0.0059 16.1 0.9 0.016 14.7 0.0 2.0 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_28 PF13521.6 gi|14520718|ref|NP_126193.1| - 0.0093 16.2 0.7 0.019 15.2 0.1 1.9 2 1 0 2 2 1 1 AAA domain ABC_tran PF00005.27 gi|14520718|ref|NP_126193.1| - 0.0094 16.5 0.2 0.068 13.7 0.0 2.2 2 0 0 2 2 2 1 ABC transporter ResIII PF04851.15 gi|14520718|ref|NP_126193.1| - 0.0099 15.9 1.4 0.082 12.9 0.1 2.4 1 1 2 3 3 3 1 Type III restriction enzyme, res subunit AAA PF00004.29 gi|14520718|ref|NP_126193.1| - 0.013 15.9 0.1 0.013 15.9 0.1 2.3 2 2 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|14520718|ref|NP_126193.1| - 0.016 14.4 0.2 0.037 13.2 0.0 1.8 1 1 0 1 1 1 0 G-protein alpha subunit Glyco_transf_4 PF13439.6 gi|14520718|ref|NP_126193.1| - 0.017 15.1 0.0 0.37 10.8 0.0 2.1 1 1 2 3 3 3 0 Glycosyltransferase Family 4 AAA_24 PF13479.6 gi|14520718|ref|NP_126193.1| - 0.018 14.8 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 gi|14520718|ref|NP_126193.1| - 0.018 14.4 0.3 0.27 10.5 0.0 2.2 2 0 0 2 2 2 0 6-phosphofructo-2-kinase AAA_7 PF12775.7 gi|14520718|ref|NP_126193.1| - 0.03 13.8 0.0 0.056 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 gi|14520718|ref|NP_126193.1| - 0.032 13.3 0.0 0.077 12.0 0.0 1.4 1 1 0 1 1 1 0 Type II/IV secretion system protein CLP1_P PF16575.5 gi|14520718|ref|NP_126193.1| - 0.037 13.8 0.2 1.7 8.4 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop TrwB_AAD_bind PF10412.9 gi|14520718|ref|NP_126193.1| - 0.044 12.7 0.0 0.11 11.4 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Arf PF00025.21 gi|14520718|ref|NP_126193.1| - 0.045 13.2 1.5 0.073 12.5 0.0 2.1 3 0 0 3 3 2 0 ADP-ribosylation factor family PIF1 PF05970.14 gi|14520718|ref|NP_126193.1| - 0.046 12.9 0.0 0.081 12.1 0.0 1.4 1 0 0 1 1 1 0 PIF1-like helicase ATP_bind_1 PF03029.17 gi|14520718|ref|NP_126193.1| - 0.047 13.5 0.1 0.15 11.8 0.1 2.0 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein LytR_C PF13399.6 gi|14520718|ref|NP_126193.1| - 0.056 14.4 0.7 0.33 12.0 0.3 2.6 2 1 0 2 2 1 0 LytR cell envelope-related transcriptional attenuator DUF2855 PF11017.8 gi|14520718|ref|NP_126193.1| - 0.1 12.3 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) AAA_15 PF13175.6 gi|14520718|ref|NP_126193.1| - 0.11 12.2 0.1 0.11 12.2 0.1 2.1 1 1 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 gi|14520718|ref|NP_126193.1| - 0.12 12.3 0.1 0.12 12.3 0.1 2.4 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea ANF_receptor PF01094.28 gi|14520718|ref|NP_126193.1| - 0.12 11.4 0.1 0.25 10.4 0.1 1.5 1 1 0 1 1 1 0 Receptor family ligand binding region LpxK PF02606.14 gi|14520718|ref|NP_126193.1| - 0.14 11.3 4.5 0.6 9.1 0.0 2.4 3 0 0 3 3 2 0 Tetraacyldisaccharide-1-P 4'-kinase EAL PF00563.20 gi|14520718|ref|NP_126193.1| - 0.14 11.6 2.9 14 5.2 0.0 3.4 2 1 2 4 4 4 0 EAL domain NACHT PF05729.12 gi|14520718|ref|NP_126193.1| - 0.16 11.9 0.1 0.32 10.9 0.1 1.5 1 0 0 1 1 1 0 NACHT domain DUF1611 PF07755.11 gi|14520718|ref|NP_126193.1| - 0.16 11.2 3.9 1.9 7.7 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain AAA_31 PF13614.6 gi|14520718|ref|NP_126193.1| - 0.2 11.5 0.1 0.2 11.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14520718|ref|NP_126193.1| - 0.24 11.9 0.2 0.24 11.9 0.2 2.5 1 1 0 2 2 1 0 AAA domain ArsA_ATPase PF02374.15 gi|14520718|ref|NP_126193.1| - 0.51 9.5 6.2 0.36 10.0 0.3 2.8 2 1 0 3 3 3 0 Anion-transporting ATPase Ribosomal_S20p PF01649.18 gi|14520718|ref|NP_126193.1| - 8.1 7.2 6.8 14 6.4 4.8 2.6 2 1 0 2 2 1 0 Ribosomal protein S20 Dehydrin PF00257.19 gi|14520718|ref|NP_126193.1| - 9.4 6.8 12.4 2.3 8.8 0.7 2.6 2 1 0 2 2 2 0 Dehydrin DUF87 PF01935.17 gi|14520718|ref|NP_126193.1| - 9.4 6.2 9.3 2.7 8.0 0.2 2.4 1 1 1 2 2 2 0 Helicase HerA, central domain Fer4 PF00037.27 gi|14520719|ref|NP_126194.1| - 1.3e-11 43.8 11.8 2e-06 27.4 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520719|ref|NP_126194.1| - 5.9e-11 42.8 7.2 7.8e-11 42.4 7.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14520719|ref|NP_126194.1| - 1.7e-08 34.5 18.0 1.1e-05 25.5 9.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14520719|ref|NP_126194.1| - 5.7e-08 32.8 6.9 0.0011 19.0 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14520719|ref|NP_126194.1| - 4.5e-06 26.4 11.9 0.0028 17.6 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14520719|ref|NP_126194.1| - 5.6e-06 27.2 6.6 0.0026 18.7 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|14520719|ref|NP_126194.1| - 8.1e-06 25.9 9.1 2.6e-05 24.3 9.3 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|14520719|ref|NP_126194.1| - 1e-05 26.0 5.1 0.0088 16.6 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 gi|14520719|ref|NP_126194.1| - 6.1e-05 22.9 10.6 0.018 15.1 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|14520719|ref|NP_126194.1| - 6.2e-05 23.8 4.4 0.0049 17.7 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|14520719|ref|NP_126194.1| - 0.00026 21.1 0.5 0.0003 20.9 0.5 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_17 PF13534.6 gi|14520719|ref|NP_126194.1| - 0.00046 20.7 11.5 0.017 15.6 11.7 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14520719|ref|NP_126194.1| - 0.00066 20.0 11.1 0.035 14.6 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14520719|ref|NP_126194.1| - 0.0027 18.1 11.5 0.2 12.2 2.4 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14520719|ref|NP_126194.1| - 0.0094 16.7 7.1 0.011 16.5 0.5 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF3343 PF11823.8 gi|14520719|ref|NP_126194.1| - 0.046 13.2 0.1 0.068 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Fer4_3 PF12798.7 gi|14520719|ref|NP_126194.1| - 0.11 13.5 16.4 0.27 12.3 5.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|14520719|ref|NP_126194.1| - 0.21 11.8 8.4 0.8 9.9 0.8 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR_N PF01855.19 gi|161723320|ref|NP_126195.2| - 2.5e-77 259.7 0.0 3.2e-77 259.4 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|161723320|ref|NP_126195.2| - 4.1e-19 68.8 0.2 7.2e-19 68.0 0.2 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|161723320|ref|NP_126195.2| - 3e-05 23.9 0.0 6.7e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|161723320|ref|NP_126195.2| - 0.00042 20.0 0.1 0.0012 18.5 0.1 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|14520721|ref|NP_126196.1| - 3.2e-39 134.2 0.3 4.6e-39 133.7 0.3 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Cas_DxTHG PF09455.10 gi|14520721|ref|NP_126196.1| - 0.092 12.3 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family POR PF01558.18 gi|14520722|ref|NP_126197.1| - 1.2e-36 126.5 0.4 2.1e-36 125.6 0.4 1.4 1 1 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Ten1_2 PF15490.6 gi|14520722|ref|NP_126197.1| - 0.076 12.7 0.0 0.19 11.4 0.0 1.7 1 1 0 1 1 1 0 Telomere-capping, CST complex subunit POR_N PF01855.19 gi|14520723|ref|NP_126198.1| - 1.8e-81 273.3 0.1 2.3e-81 272.9 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|14520723|ref|NP_126198.1| - 3.5e-20 72.2 0.0 2.9e-19 69.2 0.1 2.2 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|14520723|ref|NP_126198.1| - 9.9e-11 41.6 0.0 2e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|14520723|ref|NP_126198.1| - 1.8e-05 24.4 0.2 2.9e-05 23.7 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Exotox-A_cataly PF09009.10 gi|14520723|ref|NP_126198.1| - 0.0075 16.0 0.1 3.5 7.3 0.0 2.4 1 1 1 2 2 2 2 Exotoxin A catalytic TPP_enzyme_C PF02775.21 gi|14520724|ref|NP_126199.1| - 6e-37 126.8 0.2 8.5e-37 126.3 0.2 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 gi|14520724|ref|NP_126199.1| - 0.14 11.0 0.1 0.21 10.3 0.1 1.2 1 0 0 1 1 1 0 XFP N-terminal domain POR PF01558.18 gi|14520725|ref|NP_126200.1| - 3.6e-36 124.9 0.0 4.2e-36 124.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Peripla_BP_2 PF01497.18 gi|14520726|ref|NP_126201.1| - 2.6e-42 145.0 0.0 3.8e-42 144.5 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Mucin PF01456.17 gi|14520726|ref|NP_126201.1| - 0.015 15.3 9.4 0.027 14.5 9.4 1.4 1 0 0 1 1 1 0 Mucin-like glycoprotein Sm_multidrug_ex PF06695.11 gi|14520727|ref|NP_126202.1| - 2.2e-26 92.9 2.6 2.7e-26 92.6 2.6 1.1 1 0 0 1 1 1 1 Putative small multi-drug export protein PAP2 PF01569.21 gi|14520728|ref|NP_126203.1| - 3.2e-13 49.6 10.5 4.8e-13 49.0 7.3 2.5 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|14520728|ref|NP_126203.1| - 2.8e-08 33.7 7.8 1.1e-07 31.8 2.9 2.2 1 1 1 2 2 2 2 PAP2 superfamily PAP2_C PF14360.6 gi|14520728|ref|NP_126203.1| - 0.00073 20.0 3.4 0.0039 17.7 0.3 2.3 2 0 0 2 2 2 1 PAP2 superfamily C-terminal TssN PF17555.2 gi|14520728|ref|NP_126203.1| - 0.21 10.9 2.2 0.29 10.5 2.2 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN ASCH PF04266.14 gi|14520729|ref|NP_126204.1| - 7.4e-22 78.0 0.7 1e-21 77.5 0.7 1.2 1 0 0 1 1 1 1 ASCH domain HAD_2 PF13419.6 gi|14520730|ref|NP_126205.1| - 1.9e-33 116.0 0.0 3e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14520730|ref|NP_126205.1| - 1.6e-20 74.3 0.1 3.4e-19 70.0 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14520730|ref|NP_126205.1| - 5.1e-17 61.7 0.0 9.9e-17 60.8 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|14520730|ref|NP_126205.1| - 6.3e-11 43.0 0.2 1.7e-10 41.7 0.1 1.7 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 gi|14520730|ref|NP_126205.1| - 0.0013 18.4 0.1 0.0045 16.6 0.0 2.0 2 0 0 2 2 2 1 Mitochondrial PGP phosphatase 5_nucleotid PF05761.14 gi|14520730|ref|NP_126205.1| - 0.025 13.5 0.2 0.87 8.4 0.1 2.5 2 1 0 2 2 2 0 5' nucleotidase family PNK3P PF08645.11 gi|14520730|ref|NP_126205.1| - 0.03 14.0 0.1 0.15 11.7 0.1 2.2 1 1 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Hydrolase_3 PF08282.12 gi|14520730|ref|NP_126205.1| - 0.037 13.8 0.2 0.21 11.3 0.0 2.2 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase NT5C PF06941.12 gi|14520730|ref|NP_126205.1| - 0.13 12.1 0.0 3.6 7.4 0.0 2.2 2 0 0 2 2 2 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) SHMT PF00464.19 gi|14520731|ref|NP_126206.1| - 4.8e-81 272.4 0.0 6.1e-81 272.1 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|14520731|ref|NP_126206.1| - 2.3e-12 46.8 0.0 3.4e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|14520731|ref|NP_126206.1| - 1.1e-09 37.8 0.0 1.9e-09 37.0 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|14520731|ref|NP_126206.1| - 2.3e-08 33.7 0.0 5.2e-08 32.5 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|14520731|ref|NP_126206.1| - 0.00013 21.5 0.0 0.00021 20.7 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SelA PF03841.13 gi|14520731|ref|NP_126206.1| - 0.00067 18.7 0.0 0.0011 18.0 0.0 1.3 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 gi|14520731|ref|NP_126206.1| - 0.0022 16.6 0.0 0.0041 15.7 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CheD PF03975.13 gi|14520731|ref|NP_126206.1| - 0.021 14.9 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 CheD chemotactic sensory transduction Lactamase_B_3 PF13483.6 gi|14520731|ref|NP_126206.1| - 0.12 12.3 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 Beta-lactamase superfamily domain ABC_tran PF00005.27 gi|14520732|ref|NP_126207.1| - 3.4e-30 105.4 0.0 5e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14520732|ref|NP_126207.1| - 1.5e-11 44.7 0.5 9.1e-05 22.4 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520732|ref|NP_126207.1| - 2.5e-05 23.8 0.0 5.2e-05 22.8 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|14520732|ref|NP_126207.1| - 0.00039 20.4 0.1 0.00078 19.4 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|14520732|ref|NP_126207.1| - 0.00047 20.7 0.0 0.00087 19.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain DLIC PF05783.11 gi|14520732|ref|NP_126207.1| - 0.00074 18.5 0.0 0.0013 17.7 0.0 1.3 1 1 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_29 PF13555.6 gi|14520732|ref|NP_126207.1| - 0.00081 19.1 0.2 0.0015 18.2 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|14520732|ref|NP_126207.1| - 0.0014 18.9 0.1 0.0043 17.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|14520732|ref|NP_126207.1| - 0.0014 18.4 0.1 0.0024 17.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|14520732|ref|NP_126207.1| - 0.0024 16.7 0.9 1.1 7.9 0.2 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|14520732|ref|NP_126207.1| - 0.004 17.5 0.0 0.007 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 gi|14520732|ref|NP_126207.1| - 0.011 15.6 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_13 PF13166.6 gi|14520732|ref|NP_126207.1| - 0.012 14.3 0.1 0.07 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|14520732|ref|NP_126207.1| - 0.013 15.9 0.6 0.043 14.2 0.6 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 gi|14520732|ref|NP_126207.1| - 0.02 15.1 0.1 0.35 11.1 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SRP54 PF00448.22 gi|14520732|ref|NP_126207.1| - 0.023 14.3 0.4 0.059 13.0 0.3 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain TsaE PF02367.17 gi|14520732|ref|NP_126207.1| - 0.025 14.6 0.2 0.045 13.8 0.2 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|14520732|ref|NP_126207.1| - 0.028 14.3 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain PduV-EutP PF10662.9 gi|14520732|ref|NP_126207.1| - 0.028 14.2 0.1 0.056 13.2 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.17 gi|14520732|ref|NP_126207.1| - 0.049 13.4 0.1 0.25 11.0 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|14520732|ref|NP_126207.1| - 0.051 13.6 0.2 0.11 12.4 0.1 1.7 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|14520732|ref|NP_126207.1| - 0.06 12.9 0.1 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|14520732|ref|NP_126207.1| - 0.065 13.8 0.0 0.15 12.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain DUF3584 PF12128.8 gi|14520732|ref|NP_126207.1| - 0.071 10.6 0.1 0.087 10.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) G-alpha PF00503.20 gi|14520732|ref|NP_126207.1| - 0.077 12.1 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 gi|14520732|ref|NP_126207.1| - 0.088 13.0 0.0 0.33 11.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|14520732|ref|NP_126207.1| - 0.095 12.3 0.5 0.15 11.6 0.2 1.5 2 0 0 2 2 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_15 PF13175.6 gi|14520732|ref|NP_126207.1| - 0.1 12.3 0.0 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain AAA_27 PF13514.6 gi|14520732|ref|NP_126207.1| - 0.1 12.2 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|14520732|ref|NP_126207.1| - 0.11 11.8 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|14520732|ref|NP_126207.1| - 0.17 12.1 0.2 0.34 11.1 0.2 1.5 1 0 0 1 1 1 0 AAA domain ABC-3 PF00950.17 gi|14520733|ref|NP_126208.1| - 2.1e-30 106.1 31.1 2.6e-30 105.8 31.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|14520733|ref|NP_126208.1| - 3.2e-05 23.1 30.4 3.2e-05 23.1 30.4 1.3 1 1 0 1 1 1 1 FecCD transport family SepZ PF06066.11 gi|14520733|ref|NP_126208.1| - 0.75 10.0 6.4 0.12 12.6 1.2 2.2 2 0 0 2 2 2 0 SepZ RNase_HII PF01351.18 gi|14520734|ref|NP_126209.1| - 7.8e-53 179.3 0.2 9.3e-53 179.0 0.2 1.1 1 0 0 1 1 1 1 Ribonuclease HII MukB_hinge PF16330.5 gi|14520734|ref|NP_126209.1| - 0.027 14.2 0.2 0.052 13.3 0.2 1.4 1 0 0 1 1 1 0 MukB hinge domain ATP-synt_F PF01990.17 gi|14520734|ref|NP_126209.1| - 0.31 11.4 2.8 0.31 11.4 0.2 2.4 2 1 1 3 3 3 0 ATP synthase (F/14-kDa) subunit GT87 PF09594.10 gi|14520735|ref|NP_126210.1| - 0.0012 18.6 12.7 0.0012 18.6 12.7 2.2 1 1 0 2 2 2 1 Glycosyltransferase family 87 PMT PF02366.18 gi|14520735|ref|NP_126210.1| - 0.0023 17.6 26.3 0.013 15.1 18.3 3.7 2 1 0 2 2 2 2 Dolichyl-phosphate-mannose-protein mannosyltransferase Mannosyl_trans4 PF15971.5 gi|14520735|ref|NP_126210.1| - 0.073 12.9 7.3 0.15 11.9 7.3 1.5 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase MoeA_N PF03453.17 gi|14520736|ref|NP_126211.1| - 1e-47 161.8 0.2 1.7e-47 161.1 0.2 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|14520736|ref|NP_126211.1| - 2.5e-19 69.4 0.0 7.4e-19 67.8 0.0 1.8 1 1 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|14520736|ref|NP_126211.1| - 1.8e-15 56.9 0.0 6.6e-15 55.0 0.0 2.1 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) 7TMR-HDED PF07697.11 gi|14520736|ref|NP_126211.1| - 0.0016 18.6 0.1 0.0053 16.9 0.1 1.8 2 0 0 2 2 2 1 7TM-HD extracellular ADP_PFK_GK PF04587.15 gi|14520737|ref|NP_126212.1| - 7.8e-104 347.6 0.0 8.9e-104 347.4 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region TruB_N PF01509.18 gi|14520738|ref|NP_126213.1| - 1.3e-26 93.7 0.2 5.3e-16 59.3 0.0 3.1 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|14520738|ref|NP_126213.1| - 3.6e-24 84.7 0.0 7.6e-24 83.6 0.0 1.6 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|14520738|ref|NP_126213.1| - 2.6e-21 75.4 0.9 4.9e-21 74.5 0.9 1.5 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.12 gi|14520738|ref|NP_126213.1| - 4.8e-18 65.0 0.1 1.3e-17 63.6 0.1 1.7 1 0 0 1 1 1 1 DKCLD (NUC011) domain UPF0113 PF03657.13 gi|14520738|ref|NP_126213.1| - 0.00049 20.3 0.3 0.0014 18.8 0.1 1.9 2 0 0 2 2 2 1 UPF0113 PUA domain SIR2_2 PF13289.6 gi|14520738|ref|NP_126213.1| - 0.18 11.9 0.0 0.34 11.0 0.0 1.5 1 0 0 1 1 1 0 SIR2-like domain DUF3783 PF12646.7 gi|14520739|ref|NP_126214.1| - 3.4e-15 55.7 0.5 1e-14 54.2 0.3 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3783) DUF1308 PF07000.11 gi|14520739|ref|NP_126214.1| - 0.067 13.1 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1308) Ehbp PF10622.9 gi|14520739|ref|NP_126214.1| - 0.076 13.1 0.4 1.8 8.6 0.0 2.4 1 1 1 2 2 2 0 Energy-converting hydrogenase B subunit P (EhbP) Voltage_CLC PF00654.20 gi|14520740|ref|NP_126215.1| - 1.1e-57 195.9 27.1 1.1e-57 195.9 27.1 2.1 1 1 1 2 2 2 2 Voltage gated chloride channel TraQ PF09679.10 gi|14520740|ref|NP_126215.1| - 0.25 11.3 2.7 2.4 8.1 0.1 2.7 1 1 1 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) SecD_SecF PF02355.16 gi|14520740|ref|NP_126215.1| - 0.34 10.3 5.1 1.8 7.9 0.1 2.7 2 1 0 2 2 2 0 Protein export membrane protein DUF4352 PF11611.8 gi|14520741|ref|NP_126216.1| - 0.021 15.1 0.0 0.039 14.2 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4352) MTS PF05175.14 gi|14520742|ref|NP_126217.1| - 4.3e-43 146.8 0.0 5e-43 146.6 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|14520742|ref|NP_126217.1| - 3.5e-12 46.3 0.1 4.3e-12 46.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|14520742|ref|NP_126217.1| - 4.5e-11 42.8 0.0 5.8e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14520742|ref|NP_126217.1| - 1.5e-08 35.2 0.0 2.7e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14520742|ref|NP_126217.1| - 9.2e-07 28.9 0.0 1.3e-06 28.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|14520742|ref|NP_126217.1| - 1.1e-06 27.9 0.0 1.3e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_16 PF10294.9 gi|14520742|ref|NP_126217.1| - 5.6e-06 26.2 0.1 1.2e-05 25.1 0.1 1.5 2 0 0 2 2 2 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 gi|14520742|ref|NP_126217.1| - 7.4e-06 25.7 0.0 9.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|14520742|ref|NP_126217.1| - 1.4e-05 25.6 0.0 3.9e-05 24.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14520742|ref|NP_126217.1| - 2.8e-05 24.8 0.0 4.7e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|14520742|ref|NP_126217.1| - 6.7e-05 22.3 0.0 8.4e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PCMT PF01135.19 gi|14520742|ref|NP_126217.1| - 0.00021 21.1 0.2 0.0006 19.6 0.1 1.7 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|14520742|ref|NP_126217.1| - 0.0011 18.8 0.0 0.0017 18.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14520742|ref|NP_126217.1| - 0.0019 17.6 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family AviRa PF11599.8 gi|14520742|ref|NP_126217.1| - 0.0058 16.1 0.0 0.0077 15.7 0.0 1.2 1 0 0 1 1 1 1 RRNA methyltransferase AviRa TehB PF03848.14 gi|14520742|ref|NP_126217.1| - 0.019 14.4 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB N6_Mtase PF02384.16 gi|14520742|ref|NP_126217.1| - 0.024 13.9 0.0 0.035 13.4 0.0 1.3 1 0 0 1 1 1 0 N-6 DNA Methylase TRM PF02005.16 gi|14520742|ref|NP_126217.1| - 0.034 13.3 0.1 0.043 13.0 0.1 1.2 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase DUF43 PF01861.16 gi|14520742|ref|NP_126217.1| - 0.039 13.2 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain UPF0020 PF01170.18 gi|14520742|ref|NP_126217.1| - 0.05 13.3 0.0 0.064 12.9 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Met_10 PF02475.16 gi|14520742|ref|NP_126217.1| - 0.062 13.0 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_15 PF09445.10 gi|14520742|ref|NP_126217.1| - 0.094 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ribosomal_S13 PF00416.22 gi|14520743|ref|NP_126218.1| - 4.5e-42 143.5 0.1 5.3e-42 143.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 S4 PF01479.25 gi|14520744|ref|NP_126219.1| - 3.2e-17 62.0 0.1 3.2e-17 62.0 0.1 2.1 2 0 0 2 2 2 1 S4 domain Ribosomal_S11 PF00411.19 gi|14520745|ref|NP_126220.1| - 4.1e-48 162.4 1.3 5.7e-48 161.9 1.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 DUF1995 PF09353.10 gi|14520745|ref|NP_126220.1| - 0.14 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) RNA_pol_A_bac PF01000.26 gi|14520746|ref|NP_126221.1| - 8.3e-29 100.2 0.0 1.6e-28 99.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|14520746|ref|NP_126221.1| - 3.6e-17 61.6 0.0 5.9e-17 60.9 0.0 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_L18 PF17135.4 gi|14520747|ref|NP_126222.1| - 1.2e-16 60.6 0.0 1.4e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 gi|14520747|ref|NP_126222.1| - 7.7e-09 36.3 1.3 1.9e-08 35.0 1.3 1.7 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L13 PF00572.18 gi|14520748|ref|NP_126223.1| - 1e-13 51.6 0.2 1.9e-11 44.3 0.2 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 RHH_8 PF17723.1 gi|14520748|ref|NP_126223.1| - 0.036 14.3 0.0 0.056 13.6 0.0 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Ribosomal_S9 PF00380.19 gi|14520749|ref|NP_126224.1| - 3.3e-30 105.1 0.2 3.7e-30 104.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_N PF01194.17 gi|14520750|ref|NP_126225.1| - 4.9e-32 110.0 0.5 5.5e-32 109.9 0.5 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 gi|14520750|ref|NP_126225.1| - 0.012 15.9 0.3 0.018 15.3 0.3 1.4 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Yippee-Mis18 PF03226.14 gi|14520750|ref|NP_126225.1| - 0.09 13.0 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly RNA_pol_Rpb6 PF01192.22 gi|14520751|ref|NP_126226.1| - 5.2e-11 42.3 0.1 6.4e-11 42.0 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 Enolase_N PF03952.16 gi|14520752|ref|NP_126227.1| - 2.6e-23 82.6 1.1 1.2e-21 77.3 0.1 2.6 2 1 0 2 2 2 1 Enolase, N-terminal domain Enolase_C PF00113.22 gi|14520752|ref|NP_126227.1| - 0.0028 16.9 0.0 0.0051 16.1 0.0 1.3 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Ribosomal_S2 PF00318.20 gi|14520753|ref|NP_126228.1| - 7.6e-27 93.9 0.1 4.8e-14 52.1 0.4 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 PALP PF00291.25 gi|14520754|ref|NP_126229.1| - 1.1e-60 205.5 0.0 1.4e-60 205.2 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Acyl_transf_2 PF02273.15 gi|14520754|ref|NP_126229.1| - 0.16 11.2 0.1 0.28 10.4 0.1 1.3 1 0 0 1 1 1 0 Acyl transferase Memo PF01875.17 gi|14520755|ref|NP_126230.1| - 4.3e-72 242.5 0.0 4.8e-72 242.3 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|14520755|ref|NP_126230.1| - 1.7e-06 27.3 0.0 2.7e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase NfeD PF01957.18 gi|14520756|ref|NP_126231.1| - 1.7e-18 66.7 3.2 2.9e-18 66.0 3.2 1.3 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding Glyco_tranf_2_5 PF13712.6 gi|14520756|ref|NP_126231.1| - 0.17 11.6 0.1 0.21 11.2 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family GHMP_kinases_N PF00288.26 gi|14520757|ref|NP_126232.1| - 2.1e-16 59.9 2.9 4.4e-16 58.9 2.9 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|14520757|ref|NP_126232.1| - 1.5e-12 47.7 0.5 1.5e-12 47.7 0.5 2.6 3 1 0 3 3 3 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|14520757|ref|NP_126232.1| - 0.015 14.8 0.0 0.048 13.2 0.0 1.9 1 0 0 1 1 1 0 Galactokinase galactose-binding signature DUF2150 PF09920.9 gi|14520757|ref|NP_126232.1| - 0.15 12.1 1.4 1.7 8.6 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2150) AA_kinase PF00696.28 gi|14520758|ref|NP_126233.1| - 1.6e-40 139.2 0.0 1.8e-40 139.0 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family DNA_ligase_A_M PF01068.21 gi|14520759|ref|NP_126234.1| - 5.3e-69 231.9 1.4 9.6e-69 231.1 1.4 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|14520759|ref|NP_126234.1| - 3.4e-40 138.2 0.4 9.5e-40 136.7 0.4 1.8 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|14520759|ref|NP_126234.1| - 6.7e-24 84.4 0.0 3.2e-23 82.2 0.0 2.2 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|14520759|ref|NP_126234.1| - 9e-07 29.3 0.9 1.5e-06 28.6 0.9 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|14520759|ref|NP_126234.1| - 0.02 14.9 0.1 0.12 12.4 0.1 2.3 1 1 0 1 1 1 0 DNA ligase OB-like domain TPR_1 PF00515.28 gi|14520759|ref|NP_126234.1| - 0.062 13.1 0.2 0.78 9.7 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Sel1 PF08238.12 gi|14520759|ref|NP_126234.1| - 0.079 13.7 0.0 0.21 12.4 0.0 1.7 1 0 0 1 1 1 0 Sel1 repeat TPR_8 PF13181.6 gi|14520759|ref|NP_126234.1| - 0.24 11.7 1.2 5.2 7.5 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat OsmC PF02566.19 gi|14520760|ref|NP_126235.1| - 1.5e-19 70.3 0.0 2.2e-19 69.8 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein ASL_C PF08328.11 gi|14520760|ref|NP_126235.1| - 0.079 13.1 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Lip_prot_lig_C PF10437.9 gi|14520761|ref|NP_126236.1| - 3.1e-06 27.1 0.2 4.9e-06 26.4 0.2 1.4 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus SpoIIM PF01944.17 gi|14520762|ref|NP_126237.1| - 4.9e-31 107.9 20.4 5.6e-31 107.7 20.4 1.0 1 0 0 1 1 1 1 Stage II sporulation protein M TraS PF10624.9 gi|14520762|ref|NP_126237.1| - 1.8 8.5 5.8 5.6 6.9 1.2 2.7 2 1 1 3 3 3 0 Plasmid conjugative transfer entry exclusion protein TraS DUF354 PF04007.12 gi|14520763|ref|NP_126238.1| - 1.3e-95 320.4 0.1 1.5e-95 320.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_transf_4 PF13439.6 gi|14520763|ref|NP_126238.1| - 0.0087 16.1 0.0 0.025 14.6 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Epimerase_2 PF02350.19 gi|14520763|ref|NP_126238.1| - 0.11 11.4 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase UDPG_MGDP_dh_N PF03721.14 gi|14520764|ref|NP_126239.1| - 5e-55 186.0 0.9 7.7e-55 185.4 0.1 1.6 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 gi|14520764|ref|NP_126239.1| - 1.3e-27 96.3 0.4 3.5e-26 91.7 0.1 2.7 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 gi|14520764|ref|NP_126239.1| - 1.4e-26 92.5 0.0 3.1e-26 91.4 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 gi|14520764|ref|NP_126239.1| - 5.1e-08 33.2 0.4 6.2e-07 29.7 0.1 2.7 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|14520764|ref|NP_126239.1| - 7.9e-07 29.1 0.0 2.2e-06 27.7 0.0 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|14520764|ref|NP_126239.1| - 5.5e-05 23.2 0.0 0.024 14.6 0.0 2.5 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|14520764|ref|NP_126239.1| - 0.00052 19.7 0.1 0.0014 18.3 0.1 1.8 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|14520764|ref|NP_126239.1| - 0.0058 17.2 0.9 5 7.8 0.0 3.3 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|14520764|ref|NP_126239.1| - 0.0086 15.4 0.1 0.019 14.3 0.1 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|14520764|ref|NP_126239.1| - 0.0098 15.3 0.1 0.021 14.2 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|14520764|ref|NP_126239.1| - 0.022 14.0 0.1 0.046 13.0 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_11 PF14833.6 gi|14520764|ref|NP_126239.1| - 0.031 14.5 0.1 0.06 13.6 0.1 1.5 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Pyr_redox PF00070.27 gi|14520764|ref|NP_126239.1| - 0.048 14.2 0.6 0.18 12.3 0.2 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Ldh_1_N PF00056.23 gi|14520764|ref|NP_126239.1| - 0.064 13.3 0.8 0.13 12.3 0.1 1.9 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain ThiF PF00899.21 gi|14520764|ref|NP_126239.1| - 0.2 11.0 0.4 18 4.6 0.1 2.2 2 0 0 2 2 2 0 ThiF family TrkA_N PF02254.18 gi|14520764|ref|NP_126239.1| - 4.6 7.5 5.9 5.5 7.3 0.2 3.3 3 1 1 4 4 4 0 TrkA-N domain Epimerase_2 PF02350.19 gi|14520765|ref|NP_126240.1| - 8e-118 393.3 0.0 9.7e-118 393.0 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Metallophos_2 PF12850.7 gi|14520766|ref|NP_126241.1| - 3.8e-30 105.3 0.0 4.6e-30 105.0 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|14520766|ref|NP_126241.1| - 4.3e-15 56.8 0.1 5.1e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase NAGLU_N PF12971.7 gi|14520766|ref|NP_126241.1| - 0.13 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain Radical_SAM PF04055.21 gi|14520767|ref|NP_126242.1| - 1.5e-27 97.1 0.1 6.7e-27 94.9 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily TRAM PF01938.20 gi|14520767|ref|NP_126242.1| - 0.0078 16.2 1.1 0.016 15.2 1.1 1.6 1 0 0 1 1 1 1 TRAM domain T2SSM PF04612.12 gi|14520767|ref|NP_126242.1| - 0.02 15.0 0.0 1 9.4 0.0 2.4 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M Fer4_14 PF13394.6 gi|14520767|ref|NP_126242.1| - 0.073 13.2 0.3 0.27 11.4 0.3 1.9 1 1 0 1 1 1 0 4Fe-4S single cluster domain HGTP_anticodon PF03129.20 gi|14520768|ref|NP_126243.1| - 5.4e-24 84.2 1.8 3.8e-23 81.4 0.1 2.8 2 1 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|14520768|ref|NP_126243.1| - 6.3e-11 42.6 0.5 4.3e-10 39.9 0.2 2.6 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|14520768|ref|NP_126243.1| - 1.2e-05 24.5 1.0 0.073 12.1 0.1 2.5 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) Zn-ribbon_8 PF09723.10 gi|14520768|ref|NP_126243.1| - 0.0027 17.8 1.8 0.32 11.2 0.1 2.8 3 0 0 3 3 3 1 Zinc ribbon domain tRNA-synt_2d PF01409.20 gi|14520768|ref|NP_126243.1| - 0.0038 16.7 0.0 0.078 12.5 0.0 2.6 2 1 0 2 2 2 1 tRNA synthetases class II core domain (F) Arc_PepC PF06819.11 gi|14520768|ref|NP_126243.1| - 0.015 15.5 4.2 0.029 14.5 2.3 2.3 2 0 0 2 2 2 0 Archaeal Peptidase A24 C-terminal Domain DNA_RNApol_7kD PF03604.13 gi|14520768|ref|NP_126243.1| - 0.036 13.7 3.0 3 7.6 0.3 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 gi|14520768|ref|NP_126243.1| - 0.096 12.1 0.7 1.6 8.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|14520768|ref|NP_126243.1| - 0.16 12.0 0.1 0.33 11.0 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2_4 PF13894.6 gi|14520768|ref|NP_126243.1| - 0.17 12.8 1.7 78 4.5 0.0 3.5 3 0 0 3 3 3 0 C2H2-type zinc finger zinc_ribbon_4 PF13717.6 gi|14520768|ref|NP_126243.1| - 0.39 10.7 1.9 4.9 7.2 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain DUF402 PF04167.13 gi|14520769|ref|NP_126244.1| - 8.3e-14 51.5 1.8 1.2e-13 51.0 1.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF402) Arm-DNA-bind_2 PF12167.8 gi|14520769|ref|NP_126244.1| - 0.15 12.0 0.1 5.3 7.0 0.0 2.2 2 0 0 2 2 2 0 Arm DNA-binding domain DUF356 PF04009.12 gi|14520770|ref|NP_126245.1| - 5.3e-36 123.1 0.1 7.4e-36 122.6 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF356) PvlArgDC PF01862.16 gi|14520771|ref|NP_126246.1| - 2.7e-40 137.8 0.2 3e-40 137.7 0.2 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) ThiI PF02568.14 gi|14520772|ref|NP_126247.1| - 1.4e-08 34.6 0.0 8.7e-08 32.0 0.0 2.1 1 1 1 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|14520772|ref|NP_126247.1| - 6.8e-07 29.0 0.0 1.3e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|14520772|ref|NP_126247.1| - 0.00018 20.5 0.0 0.00035 19.5 0.0 1.6 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|14520772|ref|NP_126247.1| - 0.0023 18.0 0.0 0.046 13.8 0.0 2.1 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 gi|14520772|ref|NP_126247.1| - 0.0035 17.1 0.0 2.2 8.0 0.0 2.3 2 0 0 2 2 2 2 PP-loop family Diphthami_syn_2 PF01902.17 gi|14520772|ref|NP_126247.1| - 0.0036 16.8 0.1 0.0093 15.5 0.1 1.7 1 0 0 1 1 1 1 Diphthamide synthase JHD PF17811.1 gi|14520772|ref|NP_126247.1| - 0.0054 17.2 0.0 0.014 15.9 0.0 1.7 1 0 0 1 1 1 1 Jumonji helical domain NAD_synthase PF02540.17 gi|14520772|ref|NP_126247.1| - 0.019 14.1 0.0 0.029 13.5 0.0 1.2 1 0 0 1 1 1 0 NAD synthase Lactamase_B_2 PF12706.7 gi|14520773|ref|NP_126248.1| - 4.1e-21 75.4 0.0 5.4e-21 75.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14520773|ref|NP_126248.1| - 2.8e-07 30.8 3.7 1e-06 28.9 3.7 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|14520773|ref|NP_126248.1| - 0.00019 21.3 0.0 0.00031 20.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF2079 PF09852.9 gi|14520774|ref|NP_126249.1| - 2.9e-57 194.6 22.5 6.1e-56 190.2 22.5 2.0 1 1 0 1 1 1 1 Predicted membrane protein (DUF2079) DUF5480 PF17576.2 gi|14520774|ref|NP_126249.1| - 2.9 7.9 7.1 13 5.9 0.0 3.7 3 0 0 3 3 3 0 Family of unknown function (DUF5480) Inos-1-P_synth PF01658.17 gi|14520775|ref|NP_126250.1| - 3.2e-21 75.6 0.0 6.5e-21 74.6 0.0 1.5 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|14520775|ref|NP_126250.1| - 1.6e-10 40.9 0.0 3e-10 40.0 0.0 1.3 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase DUF4855 PF16147.5 gi|14520775|ref|NP_126250.1| - 0.066 12.3 0.1 0.12 11.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4855) RtcB PF01139.17 gi|14520776|ref|NP_126251.1| - 3.1e-179 596.5 0.0 3.5e-179 596.3 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB LAGLIDADG_3 PF14528.6 gi|14520776|ref|NP_126251.1| - 6.4e-28 96.9 1.8 7e-22 77.6 0.0 2.5 2 0 0 2 2 2 2 LAGLIDADG-like domain Intein_splicing PF14890.6 gi|14520776|ref|NP_126251.1| - 3.8e-12 46.3 0.0 7.3e-12 45.4 0.0 1.5 1 0 0 1 1 1 1 Intein splicing domain Lig_C PF18330.1 gi|14520776|ref|NP_126251.1| - 0.049 13.6 0.1 0.76 9.8 0.0 2.5 2 0 0 2 2 2 0 Ligase Pab1020 C-terminal region LAGLIDADG_WhiA PF14527.6 gi|14520776|ref|NP_126251.1| - 0.062 13.4 0.1 0.63 10.2 0.1 2.6 2 1 0 2 2 2 0 WhiA LAGLIDADG-like domain PaaX PF07848.12 gi|14520777|ref|NP_126252.1| - 0.033 14.4 0.0 0.07 13.4 0.0 1.5 1 0 0 1 1 1 0 PaaX-like protein Rpr2 PF04032.16 gi|14520778|ref|NP_126253.1| - 2.3e-18 66.3 0.1 3.7e-18 65.6 0.1 1.3 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain NMD3 PF04981.13 gi|14520778|ref|NP_126253.1| - 0.0019 17.7 1.1 0.002 17.6 0.3 1.5 1 1 0 1 1 1 1 NMD3 family CbiA PF01656.23 gi|14520779|ref|NP_126254.1| - 7.2e-25 87.5 0.3 1e-24 87.0 0.3 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|14520779|ref|NP_126254.1| - 4.1e-23 82.2 0.2 5.9e-23 81.7 0.2 1.2 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|14520779|ref|NP_126254.1| - 3.8e-21 75.7 2.3 1.5e-20 73.7 2.3 1.9 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|14520779|ref|NP_126254.1| - 6.4e-14 52.0 0.2 1.2e-07 31.4 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|14520779|ref|NP_126254.1| - 3.1e-09 36.7 0.0 3.5e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|14520779|ref|NP_126254.1| - 8.8e-09 35.0 0.5 1.4e-07 31.1 0.5 2.2 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|14520779|ref|NP_126254.1| - 1.7e-07 30.8 0.7 3.1e-07 29.9 0.2 1.7 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_26 PF13500.6 gi|14520779|ref|NP_126254.1| - 2.6e-06 27.4 0.4 2.6e-06 27.4 0.4 2.1 2 1 0 2 2 2 1 AAA domain VirC1 PF07015.11 gi|14520779|ref|NP_126254.1| - 0.00064 19.1 0.2 0.0014 18.0 0.2 1.5 1 0 0 1 1 1 1 VirC1 protein SRP54 PF00448.22 gi|14520779|ref|NP_126254.1| - 0.0072 16.0 0.7 0.016 14.8 0.4 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|14520779|ref|NP_126254.1| - 0.0082 15.9 0.1 0.013 15.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|14520779|ref|NP_126254.1| - 0.082 12.5 0.9 0.42 10.2 0.9 2.1 1 1 0 1 1 1 0 AAA domain OTCace_N PF02729.21 gi|14520779|ref|NP_126254.1| - 0.092 12.8 0.0 0.35 10.9 0.0 1.9 3 0 0 3 3 3 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PhoH PF02562.16 gi|14520779|ref|NP_126254.1| - 0.13 11.7 0.3 0.24 10.8 0.3 1.5 1 0 0 1 1 1 0 PhoH-like protein APS_kinase PF01583.20 gi|14520779|ref|NP_126254.1| - 0.14 12.0 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_33 PF13671.6 gi|14520779|ref|NP_126254.1| - 0.18 12.0 0.0 0.38 10.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain DUF2095 PF09868.9 gi|14520780|ref|NP_126255.1| - 1.1e-74 248.6 5.3 1.2e-74 248.4 5.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2095) SAS-6_N PF16531.5 gi|14520780|ref|NP_126255.1| - 0.0041 17.7 0.0 0.0057 17.2 0.0 1.2 1 0 0 1 1 1 1 Centriolar protein SAS N-terminal PYNP_C PF07831.13 gi|14520781|ref|NP_126256.1| - 6e-16 57.9 0.1 6e-16 57.9 0.1 2.6 4 0 0 4 4 4 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.21 gi|14520781|ref|NP_126256.1| - 1e-15 58.0 0.9 9.3e-15 54.9 0.9 2.1 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|14520781|ref|NP_126256.1| - 3.9e-13 49.0 1.1 1.1e-12 47.6 0.6 2.1 2 0 0 2 2 2 1 Glycosyl transferase family, helical bundle domain DUF2254 PF10011.9 gi|14520781|ref|NP_126256.1| - 3.4e-07 29.4 0.1 5.8e-07 28.7 0.1 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) Molydop_binding PF01568.21 gi|14520781|ref|NP_126256.1| - 0.00047 20.2 0.0 0.0014 18.6 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Biotin_lipoyl PF00364.22 gi|14520781|ref|NP_126256.1| - 0.0015 18.3 0.1 0.012 15.4 0.0 2.5 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|14520781|ref|NP_126256.1| - 0.0035 17.1 0.0 0.027 14.3 0.0 2.4 2 0 0 2 2 2 1 Biotin-lipoyl like CDC48_N PF02359.18 gi|14520781|ref|NP_126256.1| - 0.011 15.9 0.0 0.047 13.9 0.0 2.1 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain PTS_EIIA_1 PF00358.20 gi|14520781|ref|NP_126256.1| - 0.055 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Glycos_transf_2 PF00535.26 gi|14520782|ref|NP_126257.1| - 4.3e-41 140.5 0.2 6.1e-41 140.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14520782|ref|NP_126257.1| - 2.1e-15 57.2 0.0 4e-15 56.3 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|14520782|ref|NP_126257.1| - 2.3e-08 33.9 0.0 5e-08 32.7 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 DUF374 PF04028.13 gi|14520782|ref|NP_126257.1| - 3e-06 26.7 0.1 5.5e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF374) Glyco_tranf_2_4 PF13704.6 gi|14520782|ref|NP_126257.1| - 3.7e-05 24.1 0.0 7.2e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|14520782|ref|NP_126257.1| - 0.15 11.6 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 CBS PF00571.28 gi|14520783|ref|NP_126258.1| - 3.3e-20 72.3 2.0 1.5e-10 41.3 0.1 2.3 2 0 0 2 2 2 2 CBS domain Na_H_Exchanger PF00999.21 gi|14520784|ref|NP_126259.1| - 3.4e-44 151.2 38.9 4.4e-44 150.8 38.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family ELFV_dehydrog PF00208.21 gi|14520785|ref|NP_126260.1| - 4.8e-79 265.5 0.7 6.2e-79 265.2 0.7 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|14520785|ref|NP_126260.1| - 7.4e-54 181.1 0.0 3.2e-53 179.0 0.0 1.9 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|14520785|ref|NP_126260.1| - 0.00029 20.3 0.1 0.00062 19.2 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|14520785|ref|NP_126260.1| - 0.041 13.4 0.0 0.15 11.6 0.1 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Gp_dh_N PF00044.24 gi|14520785|ref|NP_126260.1| - 0.12 12.7 0.0 0.25 11.7 0.0 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HTH_24 PF13412.6 gi|14520786|ref|NP_126261.1| - 3.8e-15 55.2 0.4 7.4e-15 54.2 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|14520786|ref|NP_126261.1| - 5.9e-14 51.6 0.2 9.5e-14 51.0 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|14520786|ref|NP_126261.1| - 6.3e-14 51.7 0.0 1.2e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|14520786|ref|NP_126261.1| - 1.8e-08 34.2 0.4 3.5e-08 33.3 0.4 1.5 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|14520786|ref|NP_126261.1| - 1.8e-06 27.9 0.0 3.3e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HxlR PF01638.17 gi|14520786|ref|NP_126261.1| - 2.5e-05 24.0 0.1 3.9e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix NapD PF03927.13 gi|14520786|ref|NP_126261.1| - 4.2e-05 23.5 0.0 8.9e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 NapD protein HTH_Mga PF08280.11 gi|14520786|ref|NP_126261.1| - 5.1e-05 23.2 0.0 0.00014 21.8 0.0 1.7 1 1 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_28 PF13518.6 gi|14520786|ref|NP_126261.1| - 5.9e-05 23.1 0.0 0.00012 22.2 0.0 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain MarR PF01047.22 gi|14520786|ref|NP_126261.1| - 9e-05 22.3 0.1 0.00022 21.1 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|14520786|ref|NP_126261.1| - 0.00013 21.7 0.0 0.00029 20.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|14520786|ref|NP_126261.1| - 0.00023 21.0 0.0 0.00045 20.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|14520786|ref|NP_126261.1| - 0.00024 20.8 0.0 0.00042 20.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.10 gi|14520786|ref|NP_126261.1| - 0.00026 20.7 0.0 0.00071 19.3 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_DeoR PF08220.12 gi|14520786|ref|NP_126261.1| - 0.00078 19.1 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|14520786|ref|NP_126261.1| - 0.00099 18.9 0.1 0.0021 17.9 0.0 1.6 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB Sigma70_r4_2 PF08281.12 gi|14520786|ref|NP_126261.1| - 0.0019 17.8 0.0 0.004 16.8 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|14520786|ref|NP_126261.1| - 0.0025 17.3 0.0 0.0056 16.2 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|14520786|ref|NP_126261.1| - 0.0025 17.7 0.0 0.0051 16.8 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|14520786|ref|NP_126261.1| - 0.0043 16.8 0.0 0.0077 16.0 0.0 1.5 1 0 0 1 1 1 1 LexA DNA binding domain HTH_12 PF08461.10 gi|14520786|ref|NP_126261.1| - 0.0044 16.9 0.3 0.016 15.1 0.3 2.1 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_36 PF13730.6 gi|14520786|ref|NP_126261.1| - 0.0046 16.9 0.0 0.0084 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|14520786|ref|NP_126261.1| - 0.0054 16.7 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_ISL3 PF13542.6 gi|14520786|ref|NP_126261.1| - 0.0067 15.8 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_10 PF04967.12 gi|14520786|ref|NP_126261.1| - 0.0069 16.2 0.1 0.016 15.0 0.1 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Rrf2 PF02082.20 gi|14520786|ref|NP_126261.1| - 0.0087 16.4 0.0 0.021 15.1 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator TFIIE_alpha PF02002.17 gi|14520786|ref|NP_126261.1| - 0.011 15.5 0.1 0.18 11.7 0.1 2.1 2 0 0 2 2 2 0 TFIIE alpha subunit HTH_34 PF13601.6 gi|14520786|ref|NP_126261.1| - 0.02 15.0 0.0 0.032 14.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|14520786|ref|NP_126261.1| - 0.029 14.3 0.1 0.041 13.9 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix Mga PF05043.13 gi|14520786|ref|NP_126261.1| - 0.042 14.4 0.1 0.18 12.4 0.0 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|14520786|ref|NP_126261.1| - 0.05 13.8 0.0 0.17 12.1 0.0 1.8 1 1 1 2 2 2 0 B-block binding subunit of TFIIIC RepL PF05732.11 gi|14520786|ref|NP_126261.1| - 0.057 12.9 0.3 0.091 12.2 0.1 1.4 2 0 0 2 2 1 0 Firmicute plasmid replication protein (RepL) DUF2621 PF11084.8 gi|14520786|ref|NP_126261.1| - 0.057 13.4 0.1 0.093 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) HTH_27 PF13463.6 gi|14520786|ref|NP_126261.1| - 0.062 13.8 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|14520786|ref|NP_126261.1| - 0.083 12.6 0.1 0.19 11.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|14520786|ref|NP_126261.1| - 0.086 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GerE PF00196.19 gi|14520786|ref|NP_126261.1| - 0.088 12.4 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family GntR PF00392.21 gi|14520786|ref|NP_126261.1| - 0.11 12.1 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_50 PF18024.1 gi|14520786|ref|NP_126261.1| - 0.13 11.9 0.0 0.45 10.2 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|14520786|ref|NP_126261.1| - 0.15 12.5 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein HTH_1 PF00126.27 gi|14520786|ref|NP_126261.1| - 0.15 12.0 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Hexapep PF00132.24 gi|14520787|ref|NP_126262.1| - 3.1e-19 67.9 14.5 2.5e-09 36.5 8.0 4.1 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|14520787|ref|NP_126262.1| - 0.00044 20.0 15.9 0.023 14.4 10.0 3.1 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase HupF_HypC PF01455.18 gi|14520787|ref|NP_126262.1| - 0.045 13.9 6.2 15 5.9 0.4 4.3 3 1 1 4 4 4 0 HupF/HypC family Prenyltransf PF01255.19 gi|14520788|ref|NP_126263.1| - 5.9e-84 281.1 0.0 6.8e-84 280.9 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Seryl_tRNA_N PF02403.22 gi|14520788|ref|NP_126263.1| - 0.023 14.9 0.1 0.1 12.8 0.0 1.9 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain TAFH PF07531.14 gi|14520788|ref|NP_126263.1| - 0.12 12.5 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 NHR1 homology to TAF MAP65_ASE1 PF03999.12 gi|14520788|ref|NP_126263.1| - 0.23 10.1 1.6 0.36 9.5 1.3 1.3 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) dCMP_cyt_deam_1 PF00383.23 gi|14520789|ref|NP_126264.1| - 2.7e-29 101.0 0.3 4.4e-29 100.3 0.3 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|14520789|ref|NP_126264.1| - 4.4e-22 78.3 0.0 5.5e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC3 PF18771.1 gi|14520789|ref|NP_126264.1| - 0.0083 16.3 0.1 0.012 15.7 0.1 1.3 1 0 0 1 1 1 1 APOBEC3 Bd3614-deam PF14439.6 gi|14520789|ref|NP_126264.1| - 0.03 14.4 0.1 0.048 13.7 0.1 1.5 1 1 0 1 1 1 0 Bd3614-like deaminase Peptidase_M48 PF01435.18 gi|14520790|ref|NP_126265.1| - 1.8e-23 83.3 0.0 2.8e-23 82.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|14520790|ref|NP_126265.1| - 0.00039 19.7 0.7 0.0016 17.7 0.1 2.1 2 1 0 2 2 2 1 BlaR1 peptidase M56 Octopine_DH PF02317.17 gi|14520790|ref|NP_126265.1| - 0.0025 17.9 0.0 0.0054 16.8 0.0 1.5 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Zn_peptidase_2 PF04298.12 gi|14520790|ref|NP_126265.1| - 0.44 9.9 12.2 0.026 14.0 4.2 2.5 2 1 0 2 2 2 0 Putative neutral zinc metallopeptidase Penicillinase_R PF03965.16 gi|14520791|ref|NP_126266.1| - 6e-17 62.1 0.1 6.9e-17 61.9 0.1 1.1 1 0 0 1 1 1 1 Penicillinase repressor PadR PF03551.14 gi|14520791|ref|NP_126266.1| - 0.015 15.3 0.3 0.072 13.1 0.1 2.0 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family MarR_2 PF12802.7 gi|14520791|ref|NP_126266.1| - 0.022 14.6 0.1 0.038 13.9 0.1 1.3 1 0 0 1 1 1 0 MarR family DUF3874 PF12990.7 gi|14520791|ref|NP_126266.1| - 0.046 14.1 0.1 0.13 12.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) GPP34 PF05719.11 gi|14520791|ref|NP_126266.1| - 0.047 13.7 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 Golgi phosphoprotein 3 (GPP34) HxlR PF01638.17 gi|14520791|ref|NP_126266.1| - 0.088 12.7 0.3 0.14 12.1 0.2 1.4 1 1 0 1 1 1 0 HxlR-like helix-turn-helix TrmB PF01978.19 gi|14520791|ref|NP_126266.1| - 0.092 12.6 0.1 0.21 11.5 0.1 1.7 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2304 PF10066.9 gi|14520792|ref|NP_126267.1| - 4.6e-22 78.2 7.0 5.2e-22 78.1 7.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Chordopox_G3 PF06129.12 gi|14520792|ref|NP_126267.1| - 0.088 13.5 8.1 2 9.2 0.3 2.9 2 1 1 3 3 3 0 Chordopoxvirus G3 protein Lung_7-TM_R PF06814.13 gi|14520792|ref|NP_126267.1| - 0.12 11.6 3.6 0.14 11.3 3.6 1.0 1 0 0 1 1 1 0 Lung seven transmembrane receptor GPS2_interact PF15784.5 gi|14520792|ref|NP_126267.1| - 0.29 11.6 1.8 0.4 11.1 1.8 1.2 1 0 0 1 1 1 0 G-protein pathway suppressor 2-interacting domain DUF948 PF06103.11 gi|14520792|ref|NP_126267.1| - 0.74 10.1 0.1 0.74 10.1 0.1 2.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) LapA_dom PF06305.11 gi|14520792|ref|NP_126267.1| - 1.6 8.6 5.6 1.9 8.3 0.1 2.8 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain LMBR1 PF04791.16 gi|14520792|ref|NP_126267.1| - 4.2 6.2 7.2 5.5 5.8 6.0 1.7 1 1 0 1 1 1 0 LMBR1-like membrane protein Glycos_transf_2 PF00535.26 gi|14520793|ref|NP_126268.1| - 9.2e-28 97.2 0.1 1.3e-27 96.6 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14520793|ref|NP_126268.1| - 6.6e-06 26.2 0.0 9.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|14520793|ref|NP_126268.1| - 0.00016 22.1 0.0 0.00032 21.2 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 eRF1_2 PF03464.15 gi|14520794|ref|NP_126269.1| - 1.1e-49 168.2 0.0 2.4e-49 167.1 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|14520794|ref|NP_126269.1| - 2.8e-36 124.4 0.4 8.7e-36 122.8 0.4 1.9 1 0 0 1 1 1 1 eRF1 domain 3 acVLRF1 PF18859.1 gi|14520794|ref|NP_126269.1| - 3e-15 56.6 0.1 1.5e-14 54.4 0.0 2.0 1 1 1 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|14520794|ref|NP_126269.1| - 5.7e-15 55.8 0.0 1.3e-14 54.7 0.0 1.6 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|14520794|ref|NP_126269.1| - 1.2e-11 44.7 0.0 2.5e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 HypA PF01155.19 gi|14520794|ref|NP_126269.1| - 0.00022 21.2 0.1 0.00048 20.1 0.1 1.7 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|14520794|ref|NP_126269.1| - 0.0044 17.1 2.5 0.0063 16.6 1.1 2.0 2 0 0 2 2 2 1 Zinc ribbon domain baeRF_family12 PF18856.1 gi|14520794|ref|NP_126269.1| - 0.011 16.3 0.0 0.027 15.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 12 zf-ribbon_3 PF13248.6 gi|14520794|ref|NP_126269.1| - 0.013 14.9 1.7 0.38 10.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|14520794|ref|NP_126269.1| - 0.018 15.4 0.1 0.41 11.1 0.0 2.3 2 0 0 2 2 2 0 Restriction alleviation protein Lar TetR_C_26 PF17934.1 gi|14520794|ref|NP_126269.1| - 0.043 14.1 0.1 0.12 12.7 0.1 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain MCM6_C PF18263.1 gi|14520794|ref|NP_126269.1| - 0.073 13.3 2.0 4.5 7.6 0.1 2.5 2 0 0 2 2 2 0 MCM6 C-terminal winged-helix domain DZR PF12773.7 gi|14520794|ref|NP_126269.1| - 0.088 12.8 0.4 0.17 12.0 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF5318 PF17249.2 gi|14520794|ref|NP_126269.1| - 0.091 12.5 0.5 0.35 10.6 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5318) zf-IS66 PF13005.7 gi|14520794|ref|NP_126269.1| - 0.41 11.1 2.4 15 6.1 0.1 3.3 4 0 0 4 4 2 0 zinc-finger binding domain of transposase IS66 Rubredoxin_2 PF18073.1 gi|14520794|ref|NP_126269.1| - 1.1 9.0 3.3 9.1 6.1 0.2 2.5 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-ACC PF17848.1 gi|14520794|ref|NP_126269.1| - 1.5 9.0 4.0 7.5 6.7 0.2 2.6 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_2 PF13240.6 gi|14520794|ref|NP_126269.1| - 1.6 8.5 6.4 1.6 8.5 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain PALP PF00291.25 gi|14520795|ref|NP_126270.1| - 2.5e-46 158.5 0.2 3e-46 158.2 0.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Peptidase_M55 PF04951.13 gi|33356701|ref|NP_126271.2| - 3e-81 272.7 0.0 3.4e-81 272.5 0.0 1.0 1 0 0 1 1 1 1 D-aminopeptidase HypA PF01155.19 gi|14520797|ref|NP_126272.1| - 2.8e-28 98.2 0.3 3.2e-28 98.0 0.3 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|14520797|ref|NP_126272.1| - 0.0002 20.8 0.8 0.25 10.9 0.1 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding DNA_RNApol_7kD PF03604.13 gi|14520797|ref|NP_126272.1| - 0.00077 19.1 0.9 0.074 12.7 0.1 2.5 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit PhnA_Zn_Ribbon PF08274.12 gi|14520797|ref|NP_126272.1| - 0.0014 18.6 1.3 0.1 12.5 0.1 2.4 2 0 0 2 2 2 1 PhnA Zinc-Ribbon Zn_Tnp_IS1595 PF12760.7 gi|14520797|ref|NP_126272.1| - 0.0015 18.5 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 2 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|14520797|ref|NP_126272.1| - 0.0022 17.7 2.5 0.69 9.7 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain UPF0547 PF10571.9 gi|14520797|ref|NP_126272.1| - 0.0023 18.0 3.1 0.18 11.9 0.2 2.3 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|14520797|ref|NP_126272.1| - 0.0023 17.3 1.5 0.087 12.3 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain TFIIS_C PF01096.18 gi|14520797|ref|NP_126272.1| - 0.0024 17.7 3.2 0.13 12.2 0.9 2.2 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 gi|14520797|ref|NP_126272.1| - 0.0056 16.6 2.7 0.5 10.3 0.2 2.4 2 0 0 2 2 2 1 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 gi|14520797|ref|NP_126272.1| - 0.0092 15.9 0.5 0.4 10.6 0.0 2.5 2 1 1 3 3 3 1 Domain found in IF2B/IF5 MCM_OB PF17207.3 gi|14520797|ref|NP_126272.1| - 0.011 15.6 0.0 0.017 14.9 0.0 1.4 1 1 0 1 1 1 0 MCM OB domain DUF1610 PF07754.11 gi|14520797|ref|NP_126272.1| - 0.012 15.5 4.1 1.4 9.0 0.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-ISL3 PF14690.6 gi|14520797|ref|NP_126272.1| - 0.013 16.2 0.2 2.5 8.9 0.0 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn-ribbon_8 PF09723.10 gi|14520797|ref|NP_126272.1| - 0.016 15.3 4.3 0.32 11.2 4.3 2.2 1 1 0 1 1 1 0 Zinc ribbon domain zf-IS66 PF13005.7 gi|14520797|ref|NP_126272.1| - 0.028 14.8 1.5 4.5 7.7 0.3 2.7 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-RING_7 PF02591.15 gi|14520797|ref|NP_126272.1| - 0.031 14.4 0.2 5.5 7.3 0.0 2.5 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-ZPR1 PF03367.13 gi|14520797|ref|NP_126272.1| - 0.033 14.0 1.9 0.16 11.8 1.2 2.2 1 1 1 2 2 2 0 ZPR1 zinc-finger domain OrfB_Zn_ribbon PF07282.11 gi|14520797|ref|NP_126272.1| - 0.036 14.0 0.3 3.2 7.8 0.1 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_5 PF13719.6 gi|14520797|ref|NP_126272.1| - 0.052 13.3 0.8 3.3 7.6 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|14520797|ref|NP_126272.1| - 0.055 13.8 0.4 0.54 10.7 0.3 2.2 1 1 0 1 1 1 0 Restriction alleviation protein Lar TackOD1 PF18551.1 gi|14520797|ref|NP_126272.1| - 0.071 12.8 1.2 5 6.8 0.1 2.2 1 1 0 2 2 2 0 Thaumarchaeal output domain 1 DUF4379 PF14311.6 gi|14520797|ref|NP_126272.1| - 0.074 13.4 3.5 0.33 11.4 3.4 2.0 1 1 1 2 2 2 0 Probable Zinc-ribbon domain Elf1 PF05129.13 gi|14520797|ref|NP_126272.1| - 0.093 12.8 0.5 0.26 11.4 0.5 1.7 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like DUF2318 PF10080.9 gi|14520797|ref|NP_126272.1| - 0.11 12.7 0.1 1.2 9.3 0.0 2.2 2 0 0 2 2 2 0 Predicted membrane protein (DUF2318) DpnI PF06044.12 gi|14520797|ref|NP_126272.1| - 0.13 11.9 0.6 0.86 9.2 0.1 2.0 1 1 1 2 2 2 0 Dam-replacing family Zn_Tnp_IS1 PF03811.13 gi|14520797|ref|NP_126272.1| - 0.14 11.9 3.4 1 9.1 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain Sgf11 PF08209.11 gi|14520797|ref|NP_126272.1| - 0.14 11.7 2.7 6 6.5 0.2 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) COX5B PF01215.19 gi|14520797|ref|NP_126272.1| - 0.15 11.8 0.1 0.42 10.3 0.1 1.7 2 0 0 2 2 2 0 Cytochrome c oxidase subunit Vb zf-HYPF PF07503.12 gi|14520797|ref|NP_126272.1| - 0.17 11.7 0.4 0.17 11.7 0.4 2.8 2 1 0 2 2 2 0 HypF finger DUF35_N PF12172.8 gi|14520797|ref|NP_126272.1| - 0.38 10.7 6.0 0.83 9.6 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin_2 PF18073.1 gi|14520797|ref|NP_126272.1| - 0.72 9.6 7.4 1.1 9.1 0.6 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain DNA_ligase_ZBD PF03119.16 gi|14520797|ref|NP_126272.1| - 5.7 7.1 12.0 2.2 8.4 0.2 2.9 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain ParA PF10609.9 gi|14520798|ref|NP_126273.1| - 1.1e-52 178.9 0.0 3.7e-52 177.2 0.0 1.7 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|14520798|ref|NP_126273.1| - 3.3e-13 49.8 0.0 4.5e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|14520798|ref|NP_126273.1| - 1.7e-11 44.3 0.1 2.3e-06 27.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|14520798|ref|NP_126273.1| - 2.4e-06 27.0 3.4 0.00032 20.0 0.1 2.6 2 1 1 3 3 3 2 Anion-transporting ATPase MipZ PF09140.11 gi|14520798|ref|NP_126273.1| - 3.6e-06 26.5 0.0 7.6e-06 25.4 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.6 gi|14520798|ref|NP_126273.1| - 0.00042 20.2 0.4 0.31 10.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.18 gi|14520798|ref|NP_126273.1| - 0.00099 18.6 0.1 0.051 13.0 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MeaB PF03308.16 gi|14520798|ref|NP_126273.1| - 0.14 11.2 0.1 0.25 10.3 0.1 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NUDIX PF00293.28 gi|14520799|ref|NP_126274.1| - 4.6e-21 75.2 0.0 6.9e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|14520799|ref|NP_126274.1| - 0.00012 21.7 0.0 0.0023 17.5 0.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4916) LPD16 PF18830.1 gi|14520799|ref|NP_126274.1| - 0.015 15.3 0.0 1.4 8.9 0.0 2.7 2 1 1 3 3 3 0 Large polyvalent protein-associated domain 16 PfkB PF00294.24 gi|14520800|ref|NP_126275.1| - 1.1e-10 41.3 0.0 1.9e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RNA_Me_trans PF04252.13 gi|14520801|ref|NP_126276.1| - 4.2e-49 166.9 0.1 5e-49 166.6 0.1 1.1 1 0 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase DUF4362 PF14275.6 gi|14520801|ref|NP_126276.1| - 0.046 14.0 0.0 0.082 13.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4362) DUF89 PF01937.19 gi|14520802|ref|NP_126277.1| - 2.7e-56 191.1 1.1 3e-56 190.9 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 Mac PF12464.8 gi|14520802|ref|NP_126277.1| - 0.015 15.5 0.1 0.049 13.9 0.0 1.9 2 0 0 2 2 2 0 Maltose acetyltransferase AIRS_C PF02769.22 gi|14520803|ref|NP_126278.1| - 7.5e-23 81.4 0.1 1.3e-22 80.6 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|14520803|ref|NP_126278.1| - 2e-16 60.4 0.5 3.4e-16 59.7 0.5 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AI-2E_transport PF01594.16 gi|14520804|ref|NP_126279.1| - 1.3e-27 96.9 36.3 1.7e-27 96.5 36.3 1.1 1 0 0 1 1 1 1 AI-2E family transporter TMEM237 PF15383.6 gi|14520804|ref|NP_126279.1| - 0.045 12.9 0.2 0.1 11.7 0.2 1.5 1 0 0 1 1 1 0 Transmembrane protein 237 Cytochrom_B561 PF03188.16 gi|14520804|ref|NP_126279.1| - 1.1 9.4 8.9 0.05 13.7 1.5 2.4 2 1 0 2 2 2 0 Eukaryotic cytochrome b561 Ph1570 PF09638.10 gi|14520805|ref|NP_126280.1| - 1.7e-70 235.9 4.3 1.9e-70 235.7 4.3 1.0 1 0 0 1 1 1 1 Ph1570 protein BAF PF02961.14 gi|14520805|ref|NP_126280.1| - 0.023 15.1 0.0 0.039 14.4 0.0 1.3 1 0 0 1 1 1 0 Barrier to autointegration factor Peptidase_S49 PF01343.18 gi|14520806|ref|NP_126281.1| - 1.3e-39 135.6 0.0 1.8e-39 135.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 gi|14520806|ref|NP_126281.1| - 7.9e-07 29.1 0.0 1.3e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 gi|14520806|ref|NP_126281.1| - 0.00054 19.0 0.0 0.00069 18.7 0.0 1.3 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CCDC106 PF15794.5 gi|14520806|ref|NP_126281.1| - 0.057 13.1 0.0 0.092 12.4 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Toxin_trans PF07952.12 gi|14520806|ref|NP_126281.1| - 0.069 12.2 0.2 0.11 11.6 0.2 1.2 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain eIF-1a PF01176.19 gi|14520807|ref|NP_126282.1| - 8e-23 80.0 0.9 2.6e-22 78.4 0.8 1.8 1 1 1 2 2 2 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 gi|14520807|ref|NP_126282.1| - 6e-06 25.9 0.2 1.3e-05 24.9 0.2 1.6 1 0 0 1 1 1 1 RsgA N-terminal domain DUF4863 PF16155.5 gi|14520807|ref|NP_126282.1| - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) RIO1 PF01163.22 gi|14520808|ref|NP_126283.1| - 9.2e-55 185.2 0.0 1.4e-54 184.5 0.0 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|14520808|ref|NP_126283.1| - 0.0013 18.7 0.4 0.0089 16.0 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family KH_1 PF00013.29 gi|14520809|ref|NP_126284.1| - 2.7e-16 59.1 9.8 4.1e-09 36.1 0.1 2.4 2 0 0 2 2 2 2 KH domain KH_8 PF17903.1 gi|14520809|ref|NP_126284.1| - 2.2e-08 34.0 0.0 4.4e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Krr1 KH1 domain SLS PF14611.6 gi|14520809|ref|NP_126284.1| - 0.013 15.3 0.6 0.13 12.1 0.1 2.0 2 0 0 2 2 2 0 Mitochondrial inner-membrane-bound regulator KH_2 PF07650.17 gi|14520809|ref|NP_126284.1| - 0.032 14.0 12.6 0.21 11.5 3.5 2.9 2 1 0 2 2 2 0 KH domain Ribosomal_L6 PF00347.23 gi|14520809|ref|NP_126284.1| - 0.044 14.5 0.2 0.12 13.1 0.2 1.7 1 0 0 1 1 1 0 Ribosomal protein L6 KH_4 PF13083.6 gi|14520809|ref|NP_126284.1| - 0.062 13.2 9.2 0.63 9.9 0.3 3.1 3 1 0 3 3 3 0 KH domain DUF3487 PF11990.8 gi|14520809|ref|NP_126284.1| - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Topo-VIb_trans PF09239.11 gi|14520810|ref|NP_126285.1| - 1.8e-58 196.9 0.1 4.8e-58 195.5 0.0 1.8 2 0 0 2 2 2 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|14520810|ref|NP_126285.1| - 1.3e-13 51.4 0.2 2.4e-13 50.6 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|14520810|ref|NP_126285.1| - 5.1e-10 39.3 0.0 1.1e-09 38.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TP6A_N PF04406.14 gi|14520811|ref|NP_126286.1| - 2e-19 69.3 0.0 3.4e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2399 PF09664.10 gi|14520811|ref|NP_126286.1| - 0.0048 16.8 0.0 0.0085 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2399) DUF530 PF04409.12 gi|14520812|ref|NP_126287.1| - 7.5e-24 84.0 10.9 2.7e-19 69.0 4.6 3.7 1 1 1 2 2 2 2 Protein of unknown function (DUF530) DUF1699 PF08004.11 gi|14520813|ref|NP_126288.1| - 3.8e-07 29.8 0.0 6.3e-07 29.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1699) HTH_23 PF13384.6 gi|14520813|ref|NP_126288.1| - 1.4e-05 24.7 0.0 3.1e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain MerR_1 PF13411.6 gi|14520813|ref|NP_126288.1| - 0.00014 21.8 1.1 0.0013 18.8 0.1 2.6 2 1 1 3 3 3 1 MerR HTH family regulatory protein HTH_28 PF13518.6 gi|14520813|ref|NP_126288.1| - 0.00015 21.8 0.0 0.0005 20.1 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain MerR PF00376.23 gi|14520813|ref|NP_126288.1| - 0.00033 20.4 2.5 0.17 11.7 0.1 2.7 3 0 0 3 3 3 2 MerR family regulatory protein TrmB PF01978.19 gi|14520813|ref|NP_126288.1| - 0.00083 19.2 0.9 0.28 11.1 0.0 2.7 2 1 1 3 3 3 2 Sugar-specific transcriptional regulator TrmB HTH_38 PF13936.6 gi|14520813|ref|NP_126288.1| - 0.0012 18.5 0.1 0.0029 17.3 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain AT_hook PF02178.19 gi|14520813|ref|NP_126288.1| - 0.0038 16.9 0.8 0.012 15.4 0.8 1.9 1 0 0 1 1 1 1 AT hook motif HTH_20 PF12840.7 gi|14520813|ref|NP_126288.1| - 0.028 14.5 0.0 0.16 12.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_32 PF13565.6 gi|14520813|ref|NP_126288.1| - 0.042 14.5 0.2 0.11 13.1 0.0 1.8 2 1 0 2 2 2 0 Homeodomain-like domain HTH_7 PF02796.15 gi|14520813|ref|NP_126288.1| - 0.048 13.7 0.5 0.095 12.8 0.5 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_25 PF13413.6 gi|14520813|ref|NP_126288.1| - 0.068 13.0 0.0 3.1 7.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 gi|14520813|ref|NP_126288.1| - 0.068 13.5 0.0 0.16 12.3 0.0 1.7 1 0 0 1 1 1 0 Transposase AbiEi_4 PF13338.6 gi|14520813|ref|NP_126288.1| - 0.11 12.7 1.1 18 5.6 0.0 2.9 3 0 0 3 3 3 0 Transcriptional regulator, AbiEi antitoxin Toprim_Crpt PF13342.6 gi|14520813|ref|NP_126288.1| - 0.22 11.5 0.9 20 5.3 0.1 2.9 3 0 0 3 3 3 0 C-terminal repeat of topoisomerase DUF2238 PF09997.9 gi|14520814|ref|NP_126289.1| - 0.025 14.4 0.2 0.042 13.7 0.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) VanZ PF04892.12 gi|14520814|ref|NP_126289.1| - 0.37 11.4 8.4 1.1 9.9 3.3 2.8 1 1 1 2 2 2 0 VanZ like family Oxidored_q5_N PF01059.17 gi|14520814|ref|NP_126289.1| - 0.44 10.7 6.4 0.16 12.1 2.3 2.1 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Lung_7-TM_R PF06814.13 gi|14520814|ref|NP_126289.1| - 0.95 8.6 6.4 0.082 12.1 1.7 1.6 2 0 0 2 2 2 0 Lung seven transmembrane receptor PmbA_TldD PF01523.16 gi|14520815|ref|NP_126290.1| - 1e-47 163.3 1.7 1.7e-47 162.6 1.7 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|14520816|ref|NP_126291.1| - 1.9e-47 162.4 0.1 3e-47 161.8 0.1 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Ph1570 PF09638.10 gi|14520816|ref|NP_126291.1| - 0.0015 18.4 0.9 0.0035 17.2 0.9 1.6 1 0 0 1 1 1 1 Ph1570 protein Radical_SAM PF04055.21 gi|14520817|ref|NP_126292.1| - 2.1e-10 41.3 0.0 3.9e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.11 gi|14520817|ref|NP_126292.1| - 1.1 8.9 3.5 3 7.5 2.7 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1848) ATPase_2 PF01637.18 gi|14520818|ref|NP_126293.1| - 6.1e-20 72.1 0.5 6.1e-20 72.1 0.5 1.7 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14520818|ref|NP_126293.1| - 5.1e-07 29.8 0.2 0.023 14.7 0.0 2.7 2 1 1 3 3 3 2 AAA domain AAA_16 PF13191.6 gi|14520818|ref|NP_126293.1| - 1.6e-06 28.6 0.0 4.7e-06 27.1 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520818|ref|NP_126293.1| - 6.3e-06 26.5 0.0 1.3e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF460 PF04312.13 gi|14520818|ref|NP_126293.1| - 0.015 15.0 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF460) Lip_prot_lig_C PF10437.9 gi|14520818|ref|NP_126293.1| - 0.14 12.2 0.7 8.7 6.4 0.0 3.1 3 0 0 3 3 3 0 Bacterial lipoate protein ligase C-terminus SMC_Nse1 PF07574.13 gi|14520818|ref|NP_126293.1| - 0.16 11.8 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex Lar_restr_allev PF14354.6 gi|14520819|ref|NP_126294.1| - 1.5e-05 25.2 0.2 1.8e-05 25.0 0.2 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-RRN7 PF11781.8 gi|14520819|ref|NP_126294.1| - 0.00031 20.4 2.1 0.0063 16.2 0.1 2.3 2 1 0 2 2 2 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zinc_ribbon_13 PF09855.9 gi|14520819|ref|NP_126294.1| - 0.00069 19.7 1.7 0.0027 17.9 1.7 1.8 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TF_Zn_Ribbon PF08271.12 gi|14520819|ref|NP_126294.1| - 0.0024 17.3 4.5 0.53 9.9 0.4 2.5 2 1 0 2 2 2 2 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|14520819|ref|NP_126294.1| - 0.01 15.5 0.9 3.1 7.6 0.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|14520819|ref|NP_126294.1| - 0.01 15.7 0.9 0.45 10.5 0.9 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|14520819|ref|NP_126294.1| - 0.026 14.4 0.9 7.2 6.6 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-piccolo PF05715.13 gi|14520819|ref|NP_126294.1| - 0.038 14.1 0.4 0.064 13.4 0.4 1.4 1 1 0 1 1 1 0 Piccolo Zn-finger Prok-RING_1 PF14446.6 gi|14520819|ref|NP_126294.1| - 0.044 13.7 0.7 3.7 7.5 0.1 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 PhnA_Zn_Ribbon PF08274.12 gi|14520819|ref|NP_126294.1| - 0.053 13.5 1.2 5.6 7.0 0.1 2.3 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Ribosomal_L32p PF01783.23 gi|14520819|ref|NP_126294.1| - 0.065 13.5 0.1 2 8.8 0.0 2.2 2 0 0 2 2 2 0 Ribosomal L32p protein family Zn-ribbon_8 PF09723.10 gi|14520819|ref|NP_126294.1| - 0.078 13.1 0.2 5.3 7.2 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|14520819|ref|NP_126294.1| - 0.08 12.7 2.4 0.92 9.3 2.4 2.1 1 1 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.9 gi|14520819|ref|NP_126294.1| - 0.083 13.0 1.8 5.2 7.2 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1595 PF12760.7 gi|14520819|ref|NP_126294.1| - 0.19 11.7 1.6 3.5 7.7 2.0 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|14520819|ref|NP_126294.1| - 0.2 11.1 3.0 2.6 7.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Prim_Zn_Ribbon PF08273.12 gi|14520819|ref|NP_126294.1| - 0.21 11.9 4.1 1.4 9.2 4.1 2.1 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase DUF2225 PF09986.9 gi|14520819|ref|NP_126294.1| - 1.2 8.8 3.0 27 4.4 3.0 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) Diphthami_syn_2 PF01902.17 gi|14520820|ref|NP_126295.1| - 4.1e-34 118.0 0.0 5.1e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase DUF835 PF05763.12 gi|14520821|ref|NP_126296.1| - 3.2e-26 91.7 0.2 5.2e-26 91.0 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF835) ACT PF01842.25 gi|14520822|ref|NP_126297.1| - 3.2e-07 30.0 0.1 5.3e-07 29.3 0.1 1.3 1 0 0 1 1 1 1 ACT domain HU-CCDC81_euk_2 PF18289.1 gi|14520822|ref|NP_126297.1| - 0.031 14.4 0.0 0.07 13.3 0.0 1.6 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 ACT_7 PF13840.6 gi|14520822|ref|NP_126297.1| - 0.058 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 ACT domain Proteasome PF00227.26 gi|14520823|ref|NP_126298.1| - 3e-67 225.8 0.1 3e-67 225.8 0.1 1.7 2 0 0 2 2 2 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|14520823|ref|NP_126298.1| - 1.3e-12 47.1 0.3 4.3e-12 45.5 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Synuclein PF01387.17 gi|14520823|ref|NP_126298.1| - 0.1 12.8 2.3 9.5 6.4 0.6 2.2 2 0 0 2 2 2 0 Synuclein SBDS PF01172.18 gi|14520824|ref|NP_126299.1| - 2.5e-26 91.6 0.1 5.2e-26 90.5 0.1 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|14520824|ref|NP_126299.1| - 7.5e-19 67.9 0.0 1.3e-18 67.1 0.0 1.4 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|14520824|ref|NP_126299.1| - 0.011 15.8 0.0 0.031 14.3 0.0 1.8 2 0 0 2 2 2 0 Elongation factor G C-terminus PHP_C PF13263.6 gi|14520824|ref|NP_126299.1| - 0.19 11.5 0.3 5.7 6.8 0.1 2.6 2 0 0 2 2 2 0 PHP-associated KH_6 PF15985.5 gi|14520825|ref|NP_126300.1| - 1.2e-07 32.0 0.7 2.7e-07 30.8 0.7 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 gi|14520825|ref|NP_126300.1| - 3.4e-07 30.0 1.2 7.3e-07 28.9 0.2 2.0 2 0 0 2 2 2 1 KH domain KH_1 PF00013.29 gi|14520825|ref|NP_126300.1| - 7.3e-06 25.7 3.4 8.3e-06 25.5 0.8 2.3 2 0 0 2 2 2 1 KH domain ECR1_N PF14382.6 gi|14520825|ref|NP_126300.1| - 1.5e-05 24.7 0.1 2.6e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region RNase_PH PF01138.21 gi|14520826|ref|NP_126301.1| - 1.9e-36 125.5 0.0 3e-36 124.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|14520826|ref|NP_126301.1| - 1.5e-16 60.1 0.4 2.7e-16 59.3 0.4 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|14520827|ref|NP_126302.1| - 9.5e-30 103.8 0.0 1.5e-29 103.1 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|14520827|ref|NP_126302.1| - 3.9e-14 52.4 1.6 9.1e-14 51.2 0.1 2.4 3 0 0 3 3 3 1 3' exoribonuclease family, domain 2 RNA_pol_Rpb5_C PF01191.19 gi|14520829|ref|NP_126304.1| - 5.9e-33 112.6 0.1 6.7e-33 112.4 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb2_6 PF00562.28 gi|14520830|ref|NP_126305.1| - 2.4e-132 441.7 0.0 3.2e-132 441.3 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|14520830|ref|NP_126305.1| - 3.4e-53 180.2 0.0 5.4e-53 179.5 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|14520830|ref|NP_126305.1| - 3.6e-39 134.4 0.1 7e-39 133.4 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|14520830|ref|NP_126305.1| - 1.7e-31 108.5 0.2 3.8e-31 107.3 0.2 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 gi|14520830|ref|NP_126305.1| - 6.2e-30 103.2 0.0 1.2e-29 102.3 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 gi|14520830|ref|NP_126305.1| - 1e-20 73.8 1.8 2.3e-20 72.6 1.8 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|14520830|ref|NP_126305.1| - 2.3e-10 40.9 0.2 6.2e-10 39.5 0.2 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 NOB1_Zn_bind PF08772.11 gi|14520830|ref|NP_126305.1| - 0.01 16.0 0.7 0.025 14.7 0.1 2.0 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Auto_anti-p27 PF06677.12 gi|14520830|ref|NP_126305.1| - 0.012 15.7 1.4 0.023 14.8 1.4 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) NRDD PF13597.6 gi|14520830|ref|NP_126305.1| - 0.03 13.1 0.8 3.7 6.2 1.4 2.2 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase RecR PF02132.15 gi|14520830|ref|NP_126305.1| - 0.23 11.1 1.1 0.43 10.2 1.1 1.4 1 0 0 1 1 1 0 RecR protein TF_Zn_Ribbon PF08271.12 gi|14520830|ref|NP_126305.1| - 0.36 10.4 2.8 1.9 8.1 2.5 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|14520830|ref|NP_126305.1| - 0.41 10.6 1.9 0.91 9.5 1.9 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-FPG_IleRS PF06827.14 gi|14520830|ref|NP_126305.1| - 0.64 9.9 3.8 1.4 8.8 3.8 1.6 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS RNA_pol_Rpb1_1 PF04997.12 gi|14520831|ref|NP_126306.1| - 5.8e-110 367.5 0.0 8e-110 367.0 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|14520831|ref|NP_126306.1| - 4.4e-75 251.5 0.1 7.4e-75 250.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|14520831|ref|NP_126306.1| - 9.1e-40 136.2 0.0 1.8e-39 135.2 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|14520831|ref|NP_126306.1| - 1.6e-31 108.5 0.2 7.5e-31 106.3 0.0 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|14520831|ref|NP_126306.1| - 4.2e-29 101.8 0.0 9.4e-29 100.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 TraB PF01963.17 gi|14520831|ref|NP_126306.1| - 0.12 12.3 0.1 0.57 10.0 0.0 2.0 2 0 0 2 2 2 0 TraB family zf-ribbon_3 PF13248.6 gi|14520831|ref|NP_126306.1| - 0.57 9.7 2.8 1.4 8.4 0.1 2.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-RING_7 PF02591.15 gi|14520831|ref|NP_126306.1| - 0.66 10.2 6.2 23 5.3 0.1 3.6 3 0 0 3 3 3 0 C4-type zinc ribbon domain Snapin_Pallidin PF14712.6 gi|14520831|ref|NP_126306.1| - 0.69 10.4 3.2 0.61 10.5 0.5 2.3 2 0 0 2 2 2 0 Snapin/Pallidin Nudix_N_2 PF14803.6 gi|14520831|ref|NP_126306.1| - 3.1 7.8 8.3 0.28 11.1 0.2 3.0 3 0 0 3 3 3 0 Nudix N-terminal RNA_pol_Rpb1_5 PF04998.17 gi|14520832|ref|NP_126307.1| - 4e-58 196.9 1.9 5.6e-58 196.5 1.9 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 Imm74 PF15603.6 gi|14520832|ref|NP_126307.1| - 0.016 15.4 1.0 1.3 9.3 0.0 2.5 2 0 0 2 2 2 0 Immunity protein 74 CDT1_C PF16679.5 gi|14520832|ref|NP_126307.1| - 0.074 13.5 0.1 0.18 12.2 0.1 1.7 1 0 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain Bac_DNA_binding PF00216.21 gi|14520832|ref|NP_126307.1| - 0.12 12.6 4.8 0.26 11.5 0.1 3.0 3 0 0 3 3 3 0 Bacterial DNA-binding protein GatB_Yqey PF02637.18 gi|14520832|ref|NP_126307.1| - 0.54 10.1 4.2 0.94 9.3 0.4 2.7 3 0 0 3 3 3 0 GatB domain Ribosomal_L7Ae PF01248.26 gi|14520833|ref|NP_126308.1| - 1.9e-21 75.6 0.0 2.1e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KH_2 PF07650.17 gi|14520834|ref|NP_126309.1| - 3.4e-19 68.4 4.2 1.3e-16 60.2 0.7 2.2 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|14520834|ref|NP_126309.1| - 3.6e-09 36.6 3.2 3.4e-08 33.5 0.3 2.3 1 1 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|14520834|ref|NP_126309.1| - 3e-07 30.2 0.8 3.9e-05 23.4 0.1 2.1 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|14520834|ref|NP_126309.1| - 0.059 13.2 5.9 1.9 8.4 0.5 2.9 1 1 1 2 2 2 0 KH domain Ribosom_S12_S23 PF00164.25 gi|14520835|ref|NP_126310.1| - 3.3e-50 168.5 1.5 4.3e-50 168.1 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S7 PF00177.21 gi|14520836|ref|NP_126311.1| - 2e-40 137.9 2.2 2.7e-40 137.5 2.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e PTH2 PF01981.16 gi|14520837|ref|NP_126312.1| - 1.1e-44 151.5 0.1 1.2e-44 151.4 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 CbiK PF06180.11 gi|14520837|ref|NP_126312.1| - 0.049 13.0 0.0 0.059 12.7 0.0 1.1 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) DUF768 PF05589.11 gi|14520837|ref|NP_126312.1| - 0.17 11.9 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF768) TruD PF01142.18 gi|14520838|ref|NP_126313.1| - 2.5e-133 444.9 0.0 2.8e-133 444.8 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Methyltr_RsmB-F PF01189.17 gi|14520839|ref|NP_126314.1| - 3.8e-53 180.1 0.0 7.3e-53 179.2 0.0 1.4 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|14520839|ref|NP_126314.1| - 2.8e-15 56.6 0.0 9.9e-15 54.8 0.0 1.9 3 0 0 3 3 3 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 gi|14520839|ref|NP_126314.1| - 5.5e-05 23.3 0.0 8.8e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 gi|14520839|ref|NP_126314.1| - 0.0055 17.4 0.0 0.089 13.5 0.0 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14520839|ref|NP_126314.1| - 0.01 15.6 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Archease PF01951.16 gi|14520840|ref|NP_126315.1| - 3e-47 160.3 0.5 3.3e-47 160.2 0.5 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) PHP_C PF13263.6 gi|14520841|ref|NP_126316.1| - 6.7e-05 22.6 0.0 0.00016 21.3 0.0 1.7 1 0 0 1 1 1 1 PHP-associated DUF1822 PF08852.11 gi|14520841|ref|NP_126316.1| - 0.003 16.6 0.0 0.0048 16.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1822) HypA PF01155.19 gi|14520841|ref|NP_126316.1| - 0.08 13.0 0.4 0.29 11.1 0.0 2.0 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 gi|14520841|ref|NP_126316.1| - 0.22 11.5 2.8 0.83 9.6 2.8 2.0 1 1 0 1 1 1 0 zinc-ribbon domain ATPase_2 PF01637.18 gi|14520842|ref|NP_126317.1| - 2.5e-68 230.5 0.6 2.5e-68 230.5 0.6 1.5 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|14520842|ref|NP_126317.1| - 1.5e-08 35.3 0.0 4.2e-08 33.8 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520842|ref|NP_126317.1| - 2.4e-06 27.9 0.0 1.1e-05 25.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|14520842|ref|NP_126317.1| - 3.1e-06 27.3 0.1 0.0054 16.8 0.0 2.6 1 1 1 2 2 2 2 AAA domain TniB PF05621.11 gi|14520842|ref|NP_126317.1| - 0.0019 17.7 0.2 0.059 12.8 0.0 2.6 3 0 0 3 3 3 1 Bacterial TniB protein AAA PF00004.29 gi|14520842|ref|NP_126317.1| - 0.006 17.0 0.0 0.16 12.4 0.0 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|14520842|ref|NP_126317.1| - 0.0081 15.7 0.0 0.036 13.6 0.0 2.0 2 0 0 2 2 2 1 P-loop containing dynein motor region Toprim_Crpt PF13342.6 gi|14520842|ref|NP_126317.1| - 0.07 13.1 0.3 38 4.3 0.1 3.3 3 0 0 3 3 3 0 C-terminal repeat of topoisomerase NACHT PF05729.12 gi|14520842|ref|NP_126317.1| - 0.16 11.9 0.0 0.64 9.9 0.0 2.1 1 1 0 1 1 1 0 NACHT domain DUF2178 PF09946.9 gi|14520843|ref|NP_126318.1| - 5.6e-11 42.6 5.8 7.3e-11 42.2 5.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) Cas_Csa4 PF09703.10 gi|14520843|ref|NP_126318.1| - 0.042 13.2 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa4) PhoR PF11808.8 gi|14520843|ref|NP_126318.1| - 0.15 12.5 0.1 0.15 12.5 0.1 2.4 2 1 0 2 2 2 0 Phosphate regulon sensor protein PhoR RseC_MucC PF04246.12 gi|14520843|ref|NP_126318.1| - 0.48 10.4 4.2 0.49 10.4 0.1 2.1 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF202 PF02656.15 gi|14520843|ref|NP_126318.1| - 2.7 8.5 9.3 0.56 10.7 0.7 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF202) HTH_3 PF01381.22 gi|14520844|ref|NP_126319.1| - 1.4e-19 69.9 0.1 1.6e-19 69.7 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|14520844|ref|NP_126319.1| - 1.6e-15 56.8 0.6 1.9e-15 56.6 0.6 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|14520844|ref|NP_126319.1| - 5.2e-11 42.7 0.0 6.4e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|14520844|ref|NP_126319.1| - 3.9e-08 33.6 0.0 4.5e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 gi|14520844|ref|NP_126319.1| - 6.6e-07 29.1 0.1 8.9e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14520844|ref|NP_126319.1| - 0.00026 20.9 0.0 0.00078 19.4 0.0 1.7 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14520844|ref|NP_126319.1| - 0.0005 19.5 1.4 0.00057 19.3 0.5 1.6 2 0 0 2 2 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|14520844|ref|NP_126319.1| - 0.00072 19.3 0.1 0.0019 18.0 0.0 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_11 PF08279.12 gi|14520844|ref|NP_126319.1| - 0.0014 18.6 0.1 0.0022 17.9 0.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|14520844|ref|NP_126319.1| - 0.0014 18.1 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_37 PF13744.6 gi|14520844|ref|NP_126319.1| - 0.0024 17.8 0.0 0.0028 17.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 gi|14520844|ref|NP_126319.1| - 0.011 15.9 0.1 0.017 15.3 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|14520844|ref|NP_126319.1| - 0.012 15.7 0.1 0.013 15.6 0.1 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_38 PF13936.6 gi|14520844|ref|NP_126319.1| - 0.012 15.3 0.1 0.05 13.4 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|14520844|ref|NP_126319.1| - 0.014 15.3 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MerR PF00376.23 gi|14520844|ref|NP_126319.1| - 0.019 14.7 0.1 0.8 9.5 0.0 2.3 2 0 0 2 2 2 0 MerR family regulatory protein TnsD PF15978.5 gi|14520844|ref|NP_126319.1| - 0.024 13.7 0.1 0.05 12.6 0.0 1.5 1 1 0 2 2 2 0 Tn7-like transposition protein D Sigma70_r4_2 PF08281.12 gi|14520844|ref|NP_126319.1| - 0.028 14.1 0.0 0.1 12.3 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|14520844|ref|NP_126319.1| - 0.033 14.1 0.0 0.06 13.3 0.0 1.4 1 0 0 1 1 1 0 MarR family DUF1323 PF07037.11 gi|14520844|ref|NP_126319.1| - 0.098 13.1 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Putative transcription regulator (DUF1323) HTH_28 PF13518.6 gi|14520844|ref|NP_126319.1| - 0.11 12.7 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_holin_2_4 PF16082.5 gi|14520845|ref|NP_126320.1| - 0.13 12.0 1.5 0.2 11.4 1.5 1.3 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like ABC_tran PF00005.27 gi|14520846|ref|NP_126321.1| - 1e-29 103.8 0.0 1.3e-29 103.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14520846|ref|NP_126321.1| - 3.2e-12 46.9 0.5 4.5e-05 23.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|14520846|ref|NP_126321.1| - 0.00015 21.4 0.0 0.00034 20.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|14520846|ref|NP_126321.1| - 0.00022 20.7 0.0 0.31 10.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|14520846|ref|NP_126321.1| - 0.00044 20.8 0.1 0.00085 19.9 0.1 1.4 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|14520846|ref|NP_126321.1| - 0.00095 18.8 0.0 0.14 11.7 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_15 PF13175.6 gi|14520846|ref|NP_126321.1| - 0.0042 16.8 0.0 0.0068 16.2 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14520846|ref|NP_126321.1| - 0.0068 16.7 0.1 0.019 15.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|14520846|ref|NP_126321.1| - 0.0073 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|14520846|ref|NP_126321.1| - 0.014 15.1 0.2 0.024 14.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|14520846|ref|NP_126321.1| - 0.021 14.8 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|14520846|ref|NP_126321.1| - 0.069 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|14520846|ref|NP_126321.1| - 0.08 11.9 0.1 0.12 11.3 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|14520846|ref|NP_126321.1| - 0.094 13.3 0.1 0.3 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 gi|14520846|ref|NP_126321.1| - 0.097 12.3 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 Thymidylate kinase AAA_16 PF13191.6 gi|14520846|ref|NP_126321.1| - 0.14 12.5 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain ABC2_membrane_3 PF12698.7 gi|14520847|ref|NP_126322.1| - 7.7e-36 123.9 25.1 8.9e-36 123.7 25.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|14520847|ref|NP_126322.1| - 4.1e-24 85.4 19.0 5.6e-24 84.9 19.0 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|14520847|ref|NP_126322.1| - 2e-22 79.7 22.1 2.7e-19 69.4 21.3 2.3 2 0 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_4 PF12730.7 gi|14520847|ref|NP_126322.1| - 2.2e-07 31.0 2.5 2.2e-07 31.0 2.5 3.3 2 1 0 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|14520847|ref|NP_126322.1| - 1.7e-05 24.5 23.4 1.7e-05 24.5 23.4 2.1 2 1 0 2 2 2 1 ABC-2 family transporter protein DpnD-PcfM PF14207.6 gi|14520847|ref|NP_126322.1| - 7.6e-05 22.5 0.1 0.061 13.2 0.2 3.3 3 0 0 3 3 3 1 DpnD/PcfM-like protein YobH PF13996.6 gi|14520847|ref|NP_126322.1| - 0.015 15.3 3.0 0.032 14.3 0.1 2.7 2 0 0 2 2 2 0 YobH-like protein PPR_long PF17177.4 gi|14520847|ref|NP_126322.1| - 0.067 12.5 0.1 0.12 11.7 0.1 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP STIMATE PF12400.8 gi|14520847|ref|NP_126322.1| - 0.6 10.7 9.4 0.47 11.0 4.4 3.0 3 1 0 3 3 3 0 STIMATE family PHO4 PF01384.20 gi|14520847|ref|NP_126322.1| - 3.7 6.5 12.6 1.4 7.9 10.1 1.6 2 0 0 2 2 2 0 Phosphate transporter family Metallophos_2 PF12850.7 gi|14520848|ref|NP_126323.1| - 8.7e-33 113.8 0.2 1e-32 113.6 0.2 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|14520848|ref|NP_126323.1| - 4.5e-10 40.4 2.3 2e-08 35.0 0.2 2.1 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|14520848|ref|NP_126323.1| - 2.1e-05 24.0 1.0 0.00011 21.6 0.2 1.9 1 1 1 2 2 2 1 Metallophosphoesterase, calcineurin superfamily RTC PF01137.21 gi|14520849|ref|NP_126324.1| - 1.4e-77 259.9 0.0 1.6e-77 259.7 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|14520849|ref|NP_126324.1| - 3.4e-24 85.3 0.2 6.1e-24 84.5 0.2 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain DUF2443 PF10398.9 gi|14520850|ref|NP_126325.1| - 0.047 13.7 0.5 8.3 6.5 0.0 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF2443) Peptidase_M42 PF05343.14 gi|14520851|ref|NP_126326.1| - 9.9e-115 382.5 0.4 1.1e-114 382.3 0.4 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|14520851|ref|NP_126326.1| - 7.6e-12 45.4 0.1 1.4e-11 44.5 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|14520851|ref|NP_126326.1| - 4e-08 33.2 0.1 4.3e-06 26.6 0.0 2.2 2 0 0 2 2 2 2 Peptidase family M28 Peptidase_M18 PF02127.15 gi|14520851|ref|NP_126326.1| - 0.00086 18.2 0.1 0.008 15.0 0.0 2.3 3 0 0 3 3 3 1 Aminopeptidase I zinc metalloprotease (M18) NusB PF01029.18 gi|33356704|ref|NP_126327.2| - 0.047 13.9 0.0 0.064 13.5 0.0 1.3 1 0 0 1 1 1 0 NusB family PocR PF10114.9 gi|33356704|ref|NP_126327.2| - 0.11 12.2 0.3 0.26 11.0 0.1 1.6 2 0 0 2 2 2 0 Sensory domain found in PocR NAC PF01849.18 gi|14520853|ref|NP_126328.1| - 1.1e-14 54.1 3.4 1.1e-14 54.1 3.4 1.8 1 1 1 2 2 2 1 NAC domain UBA_4 PF14555.6 gi|14520853|ref|NP_126328.1| - 0.0043 16.8 0.0 0.0065 16.3 0.0 1.3 1 0 0 1 1 1 1 UBA-like domain Clp_N PF02861.20 gi|14520853|ref|NP_126328.1| - 0.076 13.2 0.2 0.18 12.0 0.2 1.7 1 0 0 1 1 1 0 Clp amino terminal domain, pathogenicity island component ASL_C PF08328.11 gi|14520853|ref|NP_126328.1| - 0.19 11.8 1.8 0.43 10.7 1.7 1.7 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminal UPF0154 PF03672.13 gi|14520853|ref|NP_126328.1| - 1.7 8.8 6.6 30 4.7 3.2 2.8 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0154) Adaptin_N PF01602.20 gi|14520854|ref|NP_126329.1| - 6.8e-12 44.7 6.0 0.00015 20.5 0.4 3.1 1 1 1 3 3 3 3 Adaptin N terminal region HEAT_2 PF13646.6 gi|14520854|ref|NP_126329.1| - 1.9e-11 44.2 3.9 0.0094 16.3 0.1 3.7 3 0 0 3 3 3 3 HEAT repeats HEAT PF02985.22 gi|14520854|ref|NP_126329.1| - 2.8e-09 36.4 0.1 0.055 13.8 0.0 4.3 4 0 0 4 4 4 3 HEAT repeat Cnd1 PF12717.7 gi|14520854|ref|NP_126329.1| - 1.7e-08 34.7 9.5 0.00025 21.1 2.8 3.6 2 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 gi|14520854|ref|NP_126329.1| - 1.7e-05 24.9 4.5 0.022 14.9 0.1 3.4 3 1 0 3 3 3 2 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_EZ PF13513.6 gi|14520854|ref|NP_126329.1| - 0.00052 20.5 0.4 0.48 11.0 0.1 4.4 4 2 1 5 5 5 1 HEAT-like repeat Arm PF00514.23 gi|14520854|ref|NP_126329.1| - 0.00076 19.4 0.1 2.7 8.2 0.0 3.0 2 0 0 2 2 2 2 Armadillo/beta-catenin-like repeat DNA_pol_A_exo1 PF01612.20 gi|14520854|ref|NP_126329.1| - 0.0096 15.6 0.2 0.063 13.0 0.1 2.2 2 0 0 2 2 2 1 3'-5' exonuclease RIX1 PF08167.12 gi|14520854|ref|NP_126329.1| - 0.026 14.3 1.2 8.4 6.1 0.2 3.6 2 2 0 3 3 3 0 rRNA processing/ribosome biogenesis IP_trans PF02121.18 gi|14520854|ref|NP_126329.1| - 0.036 13.6 0.0 0.067 12.8 0.0 1.5 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein Katanin_con80 PF13925.6 gi|14520854|ref|NP_126329.1| - 0.042 13.9 8.3 0.75 9.8 1.4 3.1 3 1 0 3 3 3 0 con80 domain of Katanin Glycos_trans_3N PF02885.17 gi|14520854|ref|NP_126329.1| - 0.095 12.6 0.1 2.3 8.1 0.2 3.0 2 1 0 2 2 2 0 Glycosyl transferase family, helical bundle domain MMS19_C PF12460.8 gi|14520854|ref|NP_126329.1| - 0.15 11.1 6.4 0.066 12.3 0.4 3.2 3 1 1 4 4 4 0 RNAPII transcription regulator C-terminal RasGEF_N_2 PF14663.6 gi|14520854|ref|NP_126329.1| - 0.34 11.3 2.8 10 6.5 0.0 3.7 3 2 0 3 3 3 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Adaptin_N PF01602.20 gi|14520855|ref|NP_126330.1| - 1.6e-16 60.0 14.5 8.3e-09 34.5 1.9 2.7 2 1 0 2 2 2 2 Adaptin N terminal region HEAT_2 PF13646.6 gi|14520855|ref|NP_126330.1| - 4.8e-13 49.3 3.5 0.0005 20.4 0.1 4.9 2 2 4 6 6 6 3 HEAT repeats Cnd1 PF12717.7 gi|14520855|ref|NP_126330.1| - 1.6e-08 34.8 15.8 0.00056 20.0 1.0 3.7 1 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 gi|14520855|ref|NP_126330.1| - 1.8e-08 34.7 0.7 0.22 12.1 0.0 5.4 4 1 1 5 5 5 2 HEAT-like repeat HEAT PF02985.22 gi|14520855|ref|NP_126330.1| - 7.2e-06 25.8 9.4 7.6 7.1 0.1 6.4 7 0 0 7 7 5 1 HEAT repeat CLASP_N PF12348.8 gi|14520855|ref|NP_126330.1| - 0.00023 20.8 7.9 0.3 10.6 0.3 4.1 2 1 2 4 4 4 2 CLASP N terminal RTP1_C1 PF10363.9 gi|14520855|ref|NP_126330.1| - 0.00083 19.5 3.9 1.1 9.5 0.1 4.0 3 2 1 4 4 4 1 Required for nuclear transport of RNA pol II C-terminus 1 DCB PF16213.5 gi|14520855|ref|NP_126330.1| - 0.0025 17.5 0.4 0.0025 17.5 0.4 3.7 2 1 2 4 4 4 1 Dimerisation and cyclophilin-binding domain of Mon2 Arm PF00514.23 gi|14520855|ref|NP_126330.1| - 0.0032 17.4 0.3 1.1 9.4 0.0 4.4 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat GGA_N-GAT PF18308.1 gi|14520855|ref|NP_126330.1| - 0.004 16.8 0.9 0.004 16.8 0.9 2.9 2 0 0 2 2 2 1 GGA N-GAT domain U3snoRNP10 PF12397.8 gi|14520855|ref|NP_126330.1| - 0.02 15.3 1.4 0.58 10.5 0.1 3.2 3 1 0 3 3 3 0 U3 small nucleolar RNA-associated protein 10 UME PF08064.13 gi|14520855|ref|NP_126330.1| - 0.029 14.3 1.0 25 4.8 0.0 3.9 3 1 1 4 4 4 0 UME (NUC010) domain DUF3385 PF11865.8 gi|14520855|ref|NP_126330.1| - 0.075 12.9 4.1 0.24 11.3 0.1 3.5 1 1 3 4 4 4 0 Domain of unknown function (DUF3385) Fis1_TPR_N PF14852.6 gi|14520855|ref|NP_126330.1| - 0.083 12.6 0.1 0.31 10.8 0.1 2.0 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat CdiI_2 PF18593.1 gi|14520855|ref|NP_126330.1| - 0.09 13.4 0.5 4.3 8.1 0.0 3.5 3 0 0 3 3 3 0 CdiI immunity protein Cnd3 PF12719.7 gi|14520855|ref|NP_126330.1| - 0.25 10.5 3.5 2.7 7.1 0.0 3.1 2 1 1 3 3 3 0 Nuclear condensing complex subunits, C-term domain preATP-grasp_3 PF18301.1 gi|14520855|ref|NP_126330.1| - 0.25 11.6 1.0 4.3 7.7 0.0 2.5 1 1 1 2 2 2 0 pre ATP-grasp 3 domain Katanin_con80 PF13925.6 gi|14520855|ref|NP_126330.1| - 0.38 10.8 5.3 2.4 8.2 0.0 3.7 3 2 1 4 4 4 0 con80 domain of Katanin Telomere_reg-2 PF10193.9 gi|14520855|ref|NP_126330.1| - 0.5 10.8 13.4 17 5.9 0.2 4.9 4 1 1 5 5 5 0 Telomere length regulation protein CRM1_C PF08767.11 gi|14520855|ref|NP_126330.1| - 0.77 8.9 6.0 0.87 8.7 0.0 2.8 3 1 0 3 3 3 0 CRM1 C terminal HycH PF07450.11 gi|14520855|ref|NP_126330.1| - 1 9.8 4.6 13 6.2 0.0 3.6 4 0 0 4 4 4 0 Formate hydrogenlyase maturation protein HycH VHS PF00790.19 gi|14520855|ref|NP_126330.1| - 1.8 8.4 6.3 1.7 8.5 0.2 3.7 4 1 0 4 4 4 0 VHS domain AsnC_trans_reg PF01037.21 gi|14520856|ref|NP_126331.1| - 3.4e-20 71.8 0.1 6.1e-20 71.0 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|14520856|ref|NP_126331.1| - 2.4e-16 59.3 0.6 3.5e-16 58.7 0.6 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|14520856|ref|NP_126331.1| - 8.3e-16 57.3 2.3 1.2e-15 56.8 2.3 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|14520856|ref|NP_126331.1| - 2.9e-06 27.0 0.1 4.2e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|14520856|ref|NP_126331.1| - 5.5e-05 23.0 0.4 0.00011 22.0 0.2 1.7 2 0 0 2 2 1 1 HTH domain NapD PF03927.13 gi|14520856|ref|NP_126331.1| - 0.0002 21.4 0.1 0.00041 20.4 0.1 1.5 1 0 0 1 1 1 1 NapD protein HTH_IclR PF09339.10 gi|14520856|ref|NP_126331.1| - 0.00044 20.0 0.0 0.00078 19.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain AsnC_trans_reg2 PF17805.1 gi|14520856|ref|NP_126331.1| - 0.0015 18.7 0.1 0.0034 17.5 0.0 1.6 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_20 PF12840.7 gi|14520856|ref|NP_126331.1| - 0.0015 18.5 0.0 0.0024 17.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|14520856|ref|NP_126331.1| - 0.0016 18.9 0.1 0.0034 17.8 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain RepL PF05732.11 gi|14520856|ref|NP_126331.1| - 0.0021 17.5 0.0 0.0038 16.7 0.0 1.4 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) TrmB PF01978.19 gi|14520856|ref|NP_126331.1| - 0.0044 16.9 0.2 0.0094 15.8 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB RuvB_C PF05491.13 gi|14520856|ref|NP_126331.1| - 0.0046 16.8 0.1 0.0084 16.0 0.1 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain HTH_23 PF13384.6 gi|14520856|ref|NP_126331.1| - 0.0073 16.1 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_DeoR PF08220.12 gi|14520856|ref|NP_126331.1| - 0.021 14.6 0.6 0.035 13.9 0.2 1.6 2 0 0 2 2 1 0 DeoR-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|14520856|ref|NP_126331.1| - 0.021 14.6 0.1 0.034 13.9 0.1 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_Mga PF08280.11 gi|14520856|ref|NP_126331.1| - 0.021 14.8 0.0 0.047 13.7 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4 PF04545.16 gi|14520856|ref|NP_126331.1| - 0.022 14.3 0.4 0.037 13.5 0.4 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|14520856|ref|NP_126331.1| - 0.033 14.1 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|14520856|ref|NP_126331.1| - 0.034 14.1 0.1 0.072 13.1 0.1 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|14520856|ref|NP_126331.1| - 0.04 14.1 0.1 0.083 13.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|14520856|ref|NP_126331.1| - 0.069 13.0 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 gi|14520856|ref|NP_126331.1| - 0.073 12.8 1.8 1.3 8.8 0.3 2.6 2 1 0 2 2 2 0 Sigma-70, region 4 Rio2_N PF09202.11 gi|14520856|ref|NP_126331.1| - 0.073 13.3 0.1 0.22 11.8 0.0 1.8 1 1 0 1 1 1 0 Rio2, N-terminal HTH_38 PF13936.6 gi|14520856|ref|NP_126331.1| - 0.076 12.8 0.8 0.15 11.9 0.7 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|14520856|ref|NP_126331.1| - 0.1 12.8 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_9 PF08221.11 gi|14520856|ref|NP_126331.1| - 0.12 12.5 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain LSM PF01423.22 gi|14520857|ref|NP_126332.1| - 3.2e-19 68.4 0.2 3.4e-19 68.3 0.2 1.0 1 0 0 1 1 1 1 LSM domain Ribosomal_L37e PF01907.19 gi|14520858|ref|NP_126333.1| - 3.5e-23 81.5 12.7 4.3e-23 81.2 12.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.7 gi|14520858|ref|NP_126333.1| - 0.014 15.4 1.4 0.017 15.1 1.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 gi|14520858|ref|NP_126333.1| - 0.054 13.5 0.5 0.064 13.3 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Succ_CoA_lig PF13607.6 gi|14520859|ref|NP_126334.1| - 5.5e-58 194.7 0.2 1.6e-56 190.0 0.1 2.8 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|14520859|ref|NP_126334.1| - 3.1e-24 85.7 0.2 2.1e-22 79.8 0.1 2.7 3 0 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|14520859|ref|NP_126334.1| - 6.8e-16 58.7 2.4 1.6e-15 57.5 0.9 2.3 2 0 0 2 2 2 1 CoA binding domain NAD_Gly3P_dh_N PF01210.23 gi|14520859|ref|NP_126334.1| - 0.03 14.3 0.4 0.25 11.3 0.0 2.4 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ligase_CoA PF00549.19 gi|14520859|ref|NP_126334.1| - 0.037 13.8 0.0 0.32 10.8 0.0 2.3 2 0 0 2 2 2 0 CoA-ligase DUF4849 PF16141.5 gi|14520859|ref|NP_126334.1| - 0.087 12.1 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DHO_dh PF01180.21 gi|14520860|ref|NP_126335.1| - 5.9e-72 242.4 0.0 6.6e-72 242.2 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|14520860|ref|NP_126335.1| - 1.3e-11 44.2 0.0 5.6e-11 42.1 0.0 1.8 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|14520860|ref|NP_126335.1| - 3.7e-05 23.3 3.7 0.00023 20.7 0.5 2.2 1 1 1 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.12 gi|14520860|ref|NP_126335.1| - 0.0036 16.5 0.2 0.022 13.9 0.2 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF561) His_biosynth PF00977.21 gi|14520860|ref|NP_126335.1| - 0.0039 16.7 0.0 0.01 15.3 0.0 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|14520860|ref|NP_126335.1| - 0.01 14.8 0.3 0.019 14.0 0.0 1.5 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 gi|14520860|ref|NP_126335.1| - 0.12 11.6 0.3 0.28 10.5 0.0 1.7 2 1 0 2 2 2 0 Thiamine monophosphate synthase Amidohydro_1 PF01979.20 gi|14520861|ref|NP_126336.1| - 9.4e-83 278.4 0.0 1.1e-82 278.1 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|14520861|ref|NP_126336.1| - 5.1e-15 55.9 0.1 4.4e-13 49.5 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|14520861|ref|NP_126336.1| - 0.0045 16.4 0.0 0.018 14.4 0.0 1.8 2 0 0 2 2 2 1 Adenosine/AMP deaminase DUF835 PF05763.12 gi|14520862|ref|NP_126337.1| - 4.7e-26 91.1 0.0 7.2e-26 90.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF835) DUF4131 PF13567.6 gi|14520862|ref|NP_126337.1| - 5.4 6.6 8.8 1.6 8.3 1.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Macro PF01661.21 gi|14520863|ref|NP_126338.1| - 5.9e-33 113.4 0.0 7.3e-33 113.1 0.0 1.1 1 0 0 1 1 1 1 Macro domain Phosphorylase PF00343.20 gi|14520864|ref|NP_126339.1| - 4.5e-39 134.4 0.0 6.2e-28 97.5 0.0 4.1 3 1 0 3 3 3 3 Carbohydrate phosphorylase DUF3417 PF11897.8 gi|14520864|ref|NP_126339.1| - 9.5e-31 106.5 2.0 9.5e-31 106.5 2.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF3417) Capsule_synth PF05159.14 gi|14520864|ref|NP_126339.1| - 0.18 11.3 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 Capsule polysaccharide biosynthesis protein Band_7 PF01145.25 gi|14520865|ref|NP_126340.1| - 3e-38 131.6 6.7 4.2e-38 131.1 6.7 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|14520865|ref|NP_126340.1| - 4.7e-05 23.2 1.8 0.00014 21.7 0.7 2.2 2 1 0 2 2 2 1 SPFH domain-Band 7 family NfeD PF01957.18 gi|14520866|ref|NP_126341.1| - 4.3e-21 75.1 3.3 1.5e-20 73.3 3.3 1.9 1 0 0 1 1 1 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 gi|14520866|ref|NP_126341.1| - 1.1e-10 41.7 0.4 1.7e-10 41.1 0.4 1.2 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 gi|14520866|ref|NP_126341.1| - 0.001 18.1 0.4 0.0019 17.3 0.4 1.3 1 0 0 1 1 1 1 Serine dehydrogenase proteinase Peptidase_S49 PF01343.18 gi|14520866|ref|NP_126341.1| - 0.081 12.9 0.2 0.18 11.7 0.2 1.6 2 0 0 2 2 2 0 Peptidase family S49 TraX PF05857.11 gi|14520866|ref|NP_126341.1| - 1.6 8.8 10.0 0.28 11.2 5.7 1.9 2 1 0 2 2 2 0 TraX protein Pyr_redox_2 PF07992.14 gi|14520867|ref|NP_126342.1| - 2.7e-71 240.2 3.4 3.8e-71 239.7 3.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14520867|ref|NP_126342.1| - 9.1e-24 83.8 8.0 7.1e-18 65.0 1.3 4.1 4 0 0 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|14520867|ref|NP_126342.1| - 1.5e-18 67.0 0.1 1e-17 64.4 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|14520867|ref|NP_126342.1| - 1.9e-08 34.0 1.6 3.3e-07 29.9 0.7 2.5 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|14520867|ref|NP_126342.1| - 7.9e-08 32.3 5.1 0.058 13.0 0.1 4.1 4 0 0 4 4 4 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|14520867|ref|NP_126342.1| - 8e-07 28.1 5.3 0.83 8.3 0.0 4.1 3 1 1 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.6 gi|14520867|ref|NP_126342.1| - 1e-05 25.7 0.1 0.19 11.9 0.0 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|14520867|ref|NP_126342.1| - 1.2e-05 24.6 0.1 0.023 13.8 0.1 3.2 3 0 0 3 3 3 2 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|14520867|ref|NP_126342.1| - 8.7e-05 21.9 0.8 0.019 14.3 0.4 2.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 gi|14520867|ref|NP_126342.1| - 8.9e-05 21.7 3.7 0.37 9.8 1.4 3.1 3 1 0 3 3 3 2 FAD binding domain Lycopene_cycl PF05834.12 gi|14520867|ref|NP_126342.1| - 0.00023 20.4 4.2 0.083 11.9 0.1 3.2 2 1 1 3 3 3 1 Lycopene cyclase protein 3HCDH_N PF02737.18 gi|14520867|ref|NP_126342.1| - 0.00025 21.0 1.3 0.0047 16.8 0.4 2.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|14520867|ref|NP_126342.1| - 0.0007 20.0 0.7 0.16 12.4 0.1 2.6 2 0 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|14520867|ref|NP_126342.1| - 0.0032 17.1 0.8 0.016 14.8 0.3 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain K_oxygenase PF13434.6 gi|14520867|ref|NP_126342.1| - 0.0052 16.0 0.1 0.21 10.7 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) 2-Hacid_dh_C PF02826.19 gi|14520867|ref|NP_126342.1| - 0.0063 15.9 0.1 0.07 12.5 0.0 2.2 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|14520867|ref|NP_126342.1| - 0.0074 16.5 1.4 2.2 8.6 0.1 3.1 4 0 0 4 4 3 1 TrkA-N domain FAD_binding_3 PF01494.19 gi|14520867|ref|NP_126342.1| - 0.014 14.7 2.8 1.6 7.9 1.0 2.7 2 1 1 3 3 3 0 FAD binding domain Glu_dehyd_C PF16912.5 gi|14520867|ref|NP_126342.1| - 0.03 13.8 1.3 1.3 8.4 0.5 2.9 1 1 1 2 2 2 0 Glucose dehydrogenase C-terminus Trp_halogenase PF04820.14 gi|14520867|ref|NP_126342.1| - 0.042 12.7 3.5 0.57 9.0 0.0 2.7 3 0 0 3 3 3 0 Tryptophan halogenase PTS_IIB PF02302.17 gi|14520867|ref|NP_126342.1| - 0.06 14.0 1.0 0.26 12.0 0.2 2.6 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit ThiF PF00899.21 gi|14520867|ref|NP_126342.1| - 0.1 11.9 0.2 2.2 7.6 0.0 2.2 2 0 0 2 2 2 0 ThiF family GFO_IDH_MocA PF01408.22 gi|14520867|ref|NP_126342.1| - 0.15 12.9 0.4 5.6 7.8 0.0 2.7 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_9 PF13454.6 gi|14520867|ref|NP_126342.1| - 0.88 9.5 2.5 14 5.7 0.0 3.4 4 0 0 4 4 4 0 FAD-NAD(P)-binding ThiC_Rad_SAM PF01964.18 gi|14520868|ref|NP_126343.1| - 1e-181 604.3 0.1 1.2e-181 604.1 0.1 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family PEP_mutase PF13714.6 gi|14520868|ref|NP_126343.1| - 0.022 14.2 0.1 0.052 13.0 0.1 1.6 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase ADH_zinc_N PF00107.26 gi|14520868|ref|NP_126343.1| - 0.11 12.4 2.8 5.2 7.1 2.5 2.7 1 1 0 1 1 1 0 Zinc-binding dehydrogenase ABC_tran PF00005.27 gi|14520869|ref|NP_126344.1| - 3e-20 73.1 0.0 6.5e-20 72.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14520869|ref|NP_126344.1| - 5.1e-09 36.4 0.3 0.00024 21.0 0.0 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Acetyltransf_1 PF00583.25 gi|14520869|ref|NP_126344.1| - 2e-05 24.8 0.0 8.1e-05 22.8 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family AAA_22 PF13401.6 gi|14520869|ref|NP_126344.1| - 2.4e-05 24.6 0.0 5.2e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14520869|ref|NP_126344.1| - 0.00022 20.7 0.0 0.0068 15.9 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Acetyltransf_7 PF13508.7 gi|14520869|ref|NP_126344.1| - 0.00041 20.7 0.0 0.0009 19.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|14520869|ref|NP_126344.1| - 0.0014 18.5 0.0 0.0038 17.2 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain AAA_16 PF13191.6 gi|14520869|ref|NP_126344.1| - 0.0018 18.7 0.2 0.0049 17.3 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|14520869|ref|NP_126344.1| - 0.0056 16.3 0.3 0.017 14.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|14520869|ref|NP_126344.1| - 0.0058 16.5 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|14520869|ref|NP_126344.1| - 0.0085 15.8 1.7 0.064 13.0 1.7 2.2 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|14520869|ref|NP_126344.1| - 0.0089 16.5 0.0 0.022 15.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain GNAT_acetyltr_2 PF13718.6 gi|14520869|ref|NP_126344.1| - 0.014 14.8 0.0 0.022 14.1 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 HypA PF01155.19 gi|14520869|ref|NP_126344.1| - 0.02 14.9 0.4 0.053 13.5 0.4 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|14520869|ref|NP_126344.1| - 0.026 14.2 3.5 0.05 13.3 3.5 1.4 1 0 0 1 1 1 0 zinc-ribbon domain FR47 PF08445.10 gi|14520869|ref|NP_126344.1| - 0.028 14.4 0.2 0.36 10.8 0.0 2.4 2 0 0 2 2 2 0 FR47-like protein AAA_29 PF13555.6 gi|14520869|ref|NP_126344.1| - 0.03 14.1 0.0 0.064 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|14520869|ref|NP_126344.1| - 0.03 14.4 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase NACHT PF05729.12 gi|14520869|ref|NP_126344.1| - 0.035 14.0 0.5 0.13 12.1 0.1 2.0 2 0 0 2 2 2 0 NACHT domain NOB1_Zn_bind PF08772.11 gi|14520869|ref|NP_126344.1| - 0.05 13.8 0.1 0.1 12.8 0.1 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like AAA_33 PF13671.6 gi|14520869|ref|NP_126344.1| - 0.08 13.1 0.4 0.23 11.6 0.4 1.8 1 0 0 1 1 1 0 AAA domain Zn-ribbon_8 PF09723.10 gi|14520869|ref|NP_126344.1| - 0.1 12.8 0.7 0.23 11.6 0.7 1.6 1 0 0 1 1 1 0 Zinc ribbon domain DUF4379 PF14311.6 gi|14520869|ref|NP_126344.1| - 0.11 12.8 0.4 0.37 11.2 0.4 1.9 1 0 0 1 1 1 0 Probable Zinc-ribbon domain MobB PF03205.14 gi|14520869|ref|NP_126344.1| - 0.11 12.3 0.4 0.44 10.4 0.1 2.2 3 0 0 3 3 1 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase PF06745.13 gi|14520869|ref|NP_126344.1| - 0.12 11.7 0.5 14 4.9 0.1 2.6 2 0 0 2 2 2 0 KaiC DUF3584 PF12128.8 gi|14520869|ref|NP_126344.1| - 0.13 9.7 0.1 0.2 9.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NB-ARC PF00931.22 gi|14520869|ref|NP_126344.1| - 0.13 11.4 0.2 0.31 10.2 0.2 1.7 1 1 0 1 1 1 0 NB-ARC domain AAA_28 PF13521.6 gi|14520869|ref|NP_126344.1| - 0.15 12.3 0.4 0.76 10.0 0.1 2.2 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|14520869|ref|NP_126344.1| - 0.17 11.5 0.1 0.35 10.5 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA PF00004.29 gi|14520869|ref|NP_126344.1| - 0.2 12.1 0.5 1.3 9.5 0.5 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zn_Tnp_IS1595 PF12760.7 gi|14520869|ref|NP_126344.1| - 2.1 8.4 5.4 7.5 6.6 0.1 2.8 3 0 0 3 3 2 0 Transposase zinc-ribbon domain TrmO PF01980.16 gi|14520870|ref|NP_126345.1| - 3.6e-41 140.1 0.0 4.5e-41 139.8 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O DUF364 PF04016.12 gi|14520871|ref|NP_126346.1| - 3.9e-34 117.4 0.0 6.5e-34 116.6 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|14520871|ref|NP_126346.1| - 2.7e-12 46.8 0.0 4.3e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF498 PF04430.14 gi|14520872|ref|NP_126347.1| - 3.1e-09 36.9 0.0 3.9e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) GntR PF00392.21 gi|14520872|ref|NP_126347.1| - 0.09 12.4 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF190 PF02641.15 gi|14520873|ref|NP_126348.1| - 5.4e-40 135.6 0.1 1.5e-39 134.2 0.1 1.6 1 1 1 2 2 2 1 Uncharacterized ACR, COG1993 P-II PF00543.22 gi|14520873|ref|NP_126348.1| - 0.021 15.4 0.1 0.033 14.8 0.1 1.2 1 0 0 1 1 1 0 Nitrogen regulatory protein P-II CRCB PF02537.15 gi|14520874|ref|NP_126349.1| - 2.3e-25 88.7 9.7 2.8e-25 88.5 9.7 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DUF543 PF04418.12 gi|14520874|ref|NP_126349.1| - 0.013 15.5 1.2 0.013 15.5 1.2 1.9 3 0 0 3 3 3 0 Domain of unknown function (DUF543) ABC2_membrane PF01061.24 gi|14520875|ref|NP_126350.1| - 2.5e-44 151.2 22.4 2.5e-44 151.2 22.4 1.4 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14520875|ref|NP_126350.1| - 1.4e-17 63.8 26.2 1.4e-17 63.8 26.2 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|14520875|ref|NP_126350.1| - 0.00081 18.8 23.3 0.0026 17.1 23.3 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF3894 PF13033.6 gi|14520875|ref|NP_126350.1| - 0.052 13.7 1.0 9.4 6.4 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3894) ABC_tran PF00005.27 gi|14520876|ref|NP_126351.1| - 3.4e-36 124.8 0.0 6.7e-36 123.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|14520876|ref|NP_126351.1| - 2.2e-09 37.9 0.0 5.3e-09 36.7 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|14520876|ref|NP_126351.1| - 2.5e-09 37.4 1.5 2.3e-06 27.7 0.2 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|14520876|ref|NP_126351.1| - 2.8e-06 27.3 1.4 0.058 13.1 0.4 2.5 2 1 1 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|14520876|ref|NP_126351.1| - 0.00035 21.1 1.9 0.00083 19.9 1.9 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|14520876|ref|NP_126351.1| - 0.00067 19.4 0.1 0.0012 18.5 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain SRP54 PF00448.22 gi|14520876|ref|NP_126351.1| - 0.002 17.8 0.1 0.0042 16.7 0.1 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_27 PF13514.6 gi|14520876|ref|NP_126351.1| - 0.0026 17.4 0.0 0.005 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14520876|ref|NP_126351.1| - 0.0081 16.6 0.6 0.13 12.7 0.6 2.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|14520876|ref|NP_126351.1| - 0.011 15.1 0.0 0.039 13.4 0.0 1.8 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 gi|14520876|ref|NP_126351.1| - 0.013 14.2 0.0 1.1 7.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 gi|14520876|ref|NP_126351.1| - 0.022 14.4 0.3 0.13 11.9 0.3 2.1 1 1 0 1 1 1 0 Thymidylate kinase AAA_30 PF13604.6 gi|14520876|ref|NP_126351.1| - 0.047 13.4 0.0 0.11 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain DUF2610 PF11020.8 gi|14520876|ref|NP_126351.1| - 0.049 13.5 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) PrpR_N PF06506.11 gi|14520876|ref|NP_126351.1| - 0.081 12.5 0.0 0.22 11.1 0.0 1.7 1 0 0 1 1 1 0 Propionate catabolism activator Rad17 PF03215.15 gi|14520876|ref|NP_126351.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|14520876|ref|NP_126351.1| - 0.12 12.3 0.1 0.43 10.5 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase PadR PF03551.14 gi|14520877|ref|NP_126352.1| - 2.9e-10 40.0 0.2 6.9e-10 38.8 0.1 1.7 2 1 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|14520877|ref|NP_126352.1| - 3.8e-05 23.6 1.7 0.00026 20.9 0.4 2.3 2 1 0 2 2 2 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|14520877|ref|NP_126352.1| - 0.0012 18.6 0.6 0.002 17.9 0.3 1.5 1 1 1 2 2 2 1 Domain of unknown function (DUF4364) HTH_34 PF13601.6 gi|14520877|ref|NP_126352.1| - 0.0023 18.0 0.1 0.0048 17.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Mrr_N PF14338.6 gi|14520877|ref|NP_126352.1| - 0.0081 16.3 1.4 0.076 13.1 0.1 2.3 2 0 0 2 2 2 1 Mrr N-terminal domain DUF1495 PF07381.11 gi|14520877|ref|NP_126352.1| - 0.016 15.0 0.1 0.049 13.5 0.1 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) AphA_like PF14557.6 gi|14520877|ref|NP_126352.1| - 0.04 13.6 0.0 0.11 12.2 0.0 1.7 2 1 0 2 2 2 0 Putative AphA-like transcriptional regulator Imm6 PF14434.6 gi|14520877|ref|NP_126352.1| - 0.071 13.0 0.2 0.1 12.5 0.2 1.3 1 0 0 1 1 1 0 Immunity protein Imm6 Vac_Fusion PF02346.16 gi|14520877|ref|NP_126352.1| - 0.086 12.5 1.1 0.17 11.5 0.3 1.9 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 Replic_Relax PF13814.6 gi|14520877|ref|NP_126352.1| - 0.09 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation Aminotran_3 PF00202.21 gi|14520878|ref|NP_126353.1| - 2.2e-115 385.6 0.0 2.6e-115 385.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|14520878|ref|NP_126353.1| - 0.00038 19.7 0.0 0.00057 19.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|14520878|ref|NP_126353.1| - 0.081 11.9 0.4 4.8 6.0 0.0 2.6 3 0 0 3 3 3 0 Aminotransferase class-V AP_endonuc_2 PF01261.24 gi|14520878|ref|NP_126353.1| - 0.15 11.5 0.1 0.35 10.3 0.1 1.6 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel DUF601 PF04642.12 gi|14520878|ref|NP_126353.1| - 0.15 11.6 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF601 CDC48_2 PF02933.17 gi|14520879|ref|NP_126354.1| - 1.2e-08 34.6 0.6 3e-08 33.3 0.4 1.8 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 Pyr_redox PF00070.27 gi|14520879|ref|NP_126354.1| - 0.094 13.3 3.1 0.2 12.2 0.8 2.3 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase HhH-GPD PF00730.25 gi|14520880|ref|NP_126355.1| - 3.5e-20 72.5 0.0 5e-20 72.0 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|14520880|ref|NP_126355.1| - 1.4e-07 31.0 0.0 1.8e-06 27.5 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|14520880|ref|NP_126355.1| - 1.6e-05 24.9 0.0 0.014 15.5 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|14520880|ref|NP_126355.1| - 0.0025 18.4 0.1 0.37 11.4 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|14520880|ref|NP_126355.1| - 0.0033 17.7 8.7 0.0057 17.0 8.7 1.4 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III DUF2400 PF09674.10 gi|14520880|ref|NP_126355.1| - 0.17 11.9 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) Rhomboid PF01694.22 gi|14520881|ref|NP_126356.1| - 5.1e-27 94.7 17.1 5.1e-27 94.7 17.1 1.6 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 gi|14520881|ref|NP_126356.1| - 0.015 15.9 1.5 0.015 15.9 1.5 2.1 2 1 1 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) Phage_holin_4_2 PF04020.13 gi|14520881|ref|NP_126356.1| - 0.12 13.0 0.2 0.12 13.0 0.2 3.3 2 1 1 3 3 3 0 Mycobacterial 4 TMS phage holin, superfamily IV DER1 PF04511.15 gi|14520881|ref|NP_126356.1| - 0.52 10.2 8.8 0.076 12.9 4.0 2.0 2 1 1 3 3 3 0 Der1-like family Ribosomal_L7Ae PF01248.26 gi|14520882|ref|NP_126357.1| - 3.1e-32 110.2 0.4 3.8e-32 109.9 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|14520882|ref|NP_126357.1| - 0.00016 21.5 0.1 0.00024 20.9 0.1 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain eRF1_3 PF03465.15 gi|14520882|ref|NP_126357.1| - 0.016 15.7 0.1 0.019 15.5 0.1 1.2 1 0 0 1 1 1 0 eRF1 domain 3 DUF1269 PF06897.12 gi|14520882|ref|NP_126357.1| - 0.063 13.6 0.2 1.2 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Ribosomal_S28e PF01200.18 gi|14520883|ref|NP_126358.1| - 1.9e-30 104.6 4.2 2.1e-30 104.5 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e DUF3850 PF12961.7 gi|14520883|ref|NP_126358.1| - 0.1 12.7 0.1 0.16 12.0 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3850) Ribosomal_L24e PF01246.20 gi|14520884|ref|NP_126359.1| - 5.7e-26 90.5 2.3 6.6e-26 90.3 2.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e DUF3268 PF11672.8 gi|14520884|ref|NP_126359.1| - 0.0051 17.1 0.2 0.0056 17.0 0.2 1.1 1 0 0 1 1 1 1 zinc-finger-containing domain YHS PF04945.13 gi|14520884|ref|NP_126359.1| - 0.013 15.6 1.1 0.024 14.7 1.1 1.4 1 0 0 1 1 1 0 YHS domain zf-FCS PF06467.14 gi|14520884|ref|NP_126359.1| - 0.019 14.9 2.0 0.038 13.9 2.0 1.4 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif zf-ribbon_3 PF13248.6 gi|14520884|ref|NP_126359.1| - 0.02 14.3 0.1 0.039 13.4 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain HscB_4_cys PF18256.1 gi|14520884|ref|NP_126359.1| - 1.3 8.9 4.5 32 4.5 4.5 2.3 1 1 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif DUF2256 PF10013.9 gi|14520884|ref|NP_126359.1| - 2.3 8.4 9.9 2.3 8.4 5.2 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) EamA PF00892.20 gi|14520885|ref|NP_126360.1| - 1.3e-39 135.5 26.0 3.9e-22 78.9 10.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family RseC_MucC PF04246.12 gi|14520885|ref|NP_126360.1| - 0.96 9.4 16.7 0.57 10.1 2.8 3.3 3 2 1 4 4 4 0 Positive regulator of sigma(E), RseC/MucC Prok-JAB PF14464.6 gi|14520886|ref|NP_126361.1| - 1.3e-13 50.8 0.0 1.5e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.21 gi|14520886|ref|NP_126361.1| - 0.025 14.6 0.0 0.045 13.7 0.0 1.3 1 1 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF4329 PF14220.6 gi|14520886|ref|NP_126361.1| - 0.092 12.7 0.0 0.16 12.0 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4329) Cation_efflux PF01545.21 gi|14520887|ref|NP_126362.1| - 4.4e-43 147.3 8.6 5.1e-43 147.1 8.6 1.0 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|14520887|ref|NP_126362.1| - 3.3e-23 81.6 2.2 7.4e-23 80.5 2.2 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter BON PF04972.17 gi|14520887|ref|NP_126362.1| - 0.00065 20.0 1.0 0.041 14.2 0.1 3.1 3 0 0 3 3 3 1 BON domain PAP2 PF01569.21 gi|14520887|ref|NP_126362.1| - 9.7 6.0 12.9 1.5 8.6 0.2 3.7 2 2 2 4 4 4 0 PAP2 superfamily HAUS4 PF14735.6 gi|14520888|ref|NP_126363.1| - 0.0022 17.8 0.9 0.0022 17.8 0.9 3.2 1 1 0 3 3 3 1 HAUS augmin-like complex subunit 4 PEP-utilisers_N PF05524.13 gi|14520888|ref|NP_126363.1| - 0.0048 17.1 1.3 0.0048 17.1 1.3 3.0 2 1 1 3 3 3 1 PEP-utilising enzyme, N-terminal Fib_alpha PF08702.10 gi|14520888|ref|NP_126363.1| - 0.014 15.6 8.9 0.13 12.5 0.8 3.0 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family EST1 PF10374.9 gi|14520888|ref|NP_126363.1| - 0.018 15.7 2.0 0.076 13.7 2.0 2.2 1 1 0 1 1 1 0 Telomerase activating protein Est1 Prominin PF05478.11 gi|14520888|ref|NP_126363.1| - 0.028 12.4 10.6 0.013 13.5 6.4 2.1 1 1 1 2 2 2 0 Prominin ApoLp-III PF07464.11 gi|14520888|ref|NP_126363.1| - 0.041 14.0 7.2 0.53 10.4 0.4 3.3 3 0 0 3 3 3 0 Apolipophorin-III precursor (apoLp-III) DUF948 PF06103.11 gi|14520888|ref|NP_126363.1| - 0.044 14.0 6.1 3 8.1 0.1 4.0 4 2 0 4 4 3 0 Bacterial protein of unknown function (DUF948) DUF1043 PF06295.12 gi|14520888|ref|NP_126363.1| - 0.045 13.8 3.7 1.9 8.5 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1043) DLP_helical PF18709.1 gi|14520888|ref|NP_126363.1| - 0.064 12.4 15.0 0.025 13.8 5.0 2.9 1 1 0 2 2 2 0 Dynamin-like helical domain DUF5320 PF17253.2 gi|14520888|ref|NP_126363.1| - 0.12 13.5 3.0 0.17 13.0 0.2 2.5 3 0 0 3 3 2 0 Family of unknown function (DUF5320) Bacillus_HBL PF05791.11 gi|14520888|ref|NP_126363.1| - 0.13 12.0 3.2 1.2 8.9 0.1 2.8 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Baculo_PEP_C PF04513.12 gi|14520888|ref|NP_126363.1| - 0.14 12.2 2.7 9.4 6.3 0.1 3.1 2 1 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Laminin_II PF06009.12 gi|14520888|ref|NP_126363.1| - 0.21 11.6 14.4 0.39 10.7 1.3 3.5 2 1 1 3 3 3 0 Laminin Domain II LMBR1 PF04791.16 gi|14520888|ref|NP_126363.1| - 0.22 10.4 11.7 0.013 14.4 3.1 2.0 1 1 1 2 2 2 0 LMBR1-like membrane protein KfrA_N PF11740.8 gi|14520888|ref|NP_126363.1| - 0.38 11.4 7.6 2 9.1 0.0 2.9 2 1 1 3 3 3 0 Plasmid replication region DNA-binding N-term DUF1664 PF07889.12 gi|14520888|ref|NP_126363.1| - 0.5 10.4 16.1 3.2 7.8 2.2 3.6 1 1 3 4 4 3 0 Protein of unknown function (DUF1664) DUF1351 PF07083.11 gi|14520888|ref|NP_126363.1| - 0.6 9.8 22.8 0.07 12.9 6.3 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1351) NAPRTase_N PF17767.1 gi|14520888|ref|NP_126363.1| - 0.74 10.2 5.7 1.9 8.9 0.3 3.2 2 1 1 3 3 3 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ALMT PF11744.8 gi|14520888|ref|NP_126363.1| - 0.86 8.4 5.5 0.26 10.1 0.7 2.1 2 0 0 2 2 2 0 Aluminium activated malate transporter MCPsignal PF00015.21 gi|14520888|ref|NP_126363.1| - 1.6 8.5 3.8 21 4.9 0.1 3.0 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain COG5 PF10392.9 gi|14520888|ref|NP_126363.1| - 3 8.0 11.9 0.34 11.1 0.9 3.3 1 1 1 3 3 3 0 Golgi transport complex subunit 5 TMPIT PF07851.13 gi|14520888|ref|NP_126363.1| - 3.1 6.9 14.3 0.69 9.1 1.0 3.1 2 1 1 3 3 3 0 TMPIT-like protein YtxH PF12732.7 gi|14520888|ref|NP_126363.1| - 3.7 8.2 17.0 30 5.2 0.0 4.6 2 1 1 3 3 2 0 YtxH-like protein Atg14 PF10186.9 gi|14520888|ref|NP_126363.1| - 6 5.9 14.5 0.21 10.7 4.8 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 MbeB_N PF04837.12 gi|14520888|ref|NP_126363.1| - 6.3 7.2 7.7 30 5.0 0.4 3.2 2 1 0 2 2 2 0 MbeB-like, N-term conserved region FUSC PF04632.12 gi|14520888|ref|NP_126363.1| - 9.2 4.7 5.6 17 3.8 0.0 2.5 1 1 1 3 3 3 0 Fusaric acid resistance protein family Serine_rich PF08824.10 gi|33356706|ref|NP_877628.1| - 0.12 12.4 0.1 2.7 8.0 0.1 2.0 2 0 0 2 2 2 0 Serine rich protein interaction domain SPASM PF13186.6 gi|33356708|ref|NP_877630.1| - 0.0011 19.5 0.1 0.003 18.0 0.0 1.8 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain BPL_LplA_LipB PF03099.19 gi|14520889|ref|NP_126364.1| - 9.1e-13 48.3 0.0 1.6e-12 47.5 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DUF674 PF05056.12 gi|14520889|ref|NP_126364.1| - 0.15 10.9 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) GTP_EFTU PF00009.27 gi|14520890|ref|NP_126365.1| - 4.6e-60 202.5 0.1 6.6e-60 202.0 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|14520890|ref|NP_126365.1| - 8.6e-38 129.1 0.1 2.2e-37 127.8 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|14520890|ref|NP_126365.1| - 1.7e-18 66.7 1.2 2.6e-17 63.0 0.3 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|14520890|ref|NP_126365.1| - 6.6e-06 26.2 0.1 2.5e-05 24.3 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 gi|14520890|ref|NP_126365.1| - 0.00057 19.3 0.0 0.014 14.8 0.0 2.2 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 gi|14520890|ref|NP_126365.1| - 0.0053 16.7 0.7 0.1 12.5 0.1 2.3 1 1 1 2 2 2 1 RsgA GTPase FeoB_N PF02421.18 gi|14520890|ref|NP_126365.1| - 0.0059 16.2 0.4 0.064 12.8 0.1 2.6 2 1 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU_D4 PF14578.6 gi|14520890|ref|NP_126365.1| - 0.049 13.5 0.2 0.13 12.2 0.2 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Dynamin_N PF00350.23 gi|14520890|ref|NP_126365.1| - 0.051 13.6 0.0 11 6.0 0.0 2.8 2 1 1 3 3 3 0 Dynamin family SRPRB PF09439.10 gi|14520890|ref|NP_126365.1| - 0.19 11.2 0.2 2.5 7.5 0.2 2.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ribosomal_S10 PF00338.22 gi|14520891|ref|NP_126366.1| - 2.1e-27 95.2 0.1 2.3e-27 95.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|14520891|ref|NP_126366.1| - 0.0014 19.4 0.4 0.0022 18.8 0.1 1.4 2 0 0 2 2 2 1 Primosomal protein N C-terminal domain TFIIB PF00382.19 gi|14520892|ref|NP_126367.1| - 7.6e-47 157.2 3.4 2.6e-24 85.0 0.1 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|14520892|ref|NP_126367.1| - 6.1e-20 70.5 1.8 9.7e-20 69.8 1.8 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.16 gi|14520892|ref|NP_126367.1| - 0.00027 20.4 1.4 0.0033 16.9 0.5 3.1 3 0 0 3 3 3 1 Sigma-70, region 4 HARE-HTH PF05066.13 gi|14520892|ref|NP_126367.1| - 0.00032 21.0 0.1 0.26 11.7 0.0 3.0 2 1 1 3 3 3 1 HB1, ASXL, restriction endonuclease HTH domain RB_B PF01857.20 gi|14520892|ref|NP_126367.1| - 0.00044 20.3 0.0 0.0015 18.6 0.0 1.8 1 1 1 2 2 2 1 Retinoblastoma-associated protein B domain HTH_AsnC-type PF13404.6 gi|14520892|ref|NP_126367.1| - 0.0066 16.3 0.4 0.38 10.6 0.3 3.2 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain zf-RRN7 PF11781.8 gi|14520892|ref|NP_126367.1| - 0.0089 15.7 3.1 0.019 14.7 3.1 1.6 1 1 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 HTH_11 PF08279.12 gi|14520892|ref|NP_126367.1| - 0.01 15.8 0.7 4.8 7.2 0.1 2.6 2 0 0 2 2 2 0 HTH domain zf-ribbon_3 PF13248.6 gi|14520892|ref|NP_126367.1| - 0.021 14.2 0.8 2 7.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HTH_Tnp_ISL3 PF13542.6 gi|14520892|ref|NP_126367.1| - 0.022 14.2 0.2 0.14 11.6 0.1 2.4 2 1 1 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 A2L_zn_ribbon PF08792.10 gi|14520892|ref|NP_126367.1| - 0.028 14.1 0.2 0.046 13.5 0.2 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain Sigma70_r4_2 PF08281.12 gi|14520892|ref|NP_126367.1| - 0.051 13.3 0.1 1.2 8.9 0.1 2.8 2 0 0 2 2 2 0 Sigma-70, region 4 GerE PF00196.19 gi|14520892|ref|NP_126367.1| - 0.057 13.0 0.0 1.2 8.8 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family FYDLN_acid PF09538.10 gi|14520892|ref|NP_126367.1| - 0.078 13.7 0.0 0.16 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF2318 PF10080.9 gi|14520892|ref|NP_126367.1| - 0.084 13.0 0.3 0.17 12.1 0.3 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) OrfB_Zn_ribbon PF07282.11 gi|14520892|ref|NP_126367.1| - 0.09 12.7 0.2 0.21 11.6 0.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Prim_Zn_Ribbon PF08273.12 gi|14520892|ref|NP_126367.1| - 0.11 12.9 0.7 0.21 11.9 0.7 1.5 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase YceG PF02618.16 gi|14520892|ref|NP_126367.1| - 0.11 12.0 0.2 0.23 11.0 0.1 1.4 1 1 0 1 1 1 0 YceG-like family Lar_restr_allev PF14354.6 gi|14520892|ref|NP_126367.1| - 0.11 12.9 0.6 0.28 11.6 0.3 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar DZR PF12773.7 gi|14520892|ref|NP_126367.1| - 0.12 12.5 0.3 0.21 11.6 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon TFIIB_C_1 PF18542.1 gi|14520892|ref|NP_126367.1| - 0.12 12.4 2.5 0.54 10.3 0.3 2.7 2 1 0 2 2 2 0 Transcription factor IIB C-terminal module 1 Auto_anti-p27 PF06677.12 gi|14520892|ref|NP_126367.1| - 0.13 12.4 1.5 0.27 11.4 1.5 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) UPF0253 PF06786.12 gi|14520892|ref|NP_126367.1| - 0.17 12.2 0.4 1.3 9.3 0.1 2.5 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0253) Cyclin_C PF02984.19 gi|14520892|ref|NP_126367.1| - 0.2 11.7 0.0 12 6.0 0.0 2.2 1 1 1 2 2 2 0 Cyclin, C-terminal domain Rubredoxin PF00301.20 gi|14520892|ref|NP_126367.1| - 1.1 9.3 3.1 3.3 7.8 0.2 2.4 1 1 1 2 2 2 0 Rubredoxin Zn_Tnp_IS1595 PF12760.7 gi|14520892|ref|NP_126367.1| - 1.5 8.8 6.0 0.15 12.1 1.2 1.9 2 0 0 2 2 1 0 Transposase zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|14520892|ref|NP_126367.1| - 3.8 7.2 4.9 6 6.6 0.2 2.7 3 0 0 3 3 2 0 NADH pyrophosphatase zinc ribbon domain RNase_P_Rpp14 PF01900.19 gi|14520893|ref|NP_126368.1| - 4.5e-23 81.5 0.0 5.1e-23 81.3 0.0 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family RNA_pol_Rpb1_7 PF04990.12 gi|14520893|ref|NP_126368.1| - 0.15 12.0 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 7 eRF1_1 PF03463.15 gi|14520894|ref|NP_126369.1| - 4e-29 101.2 0.0 7.1e-29 100.4 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|14520894|ref|NP_126369.1| - 1.3e-26 93.2 2.1 2.2e-26 92.5 0.7 2.2 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|14520894|ref|NP_126369.1| - 2.5e-15 57.0 0.1 4.9e-15 56.0 0.1 1.5 1 0 0 1 1 1 1 eRF1 domain 2 baeRF_family10 PF18854.1 gi|14520894|ref|NP_126369.1| - 2.1e-06 28.0 0.8 4.1e-06 27.1 0.2 1.7 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family12 PF18856.1 gi|14520894|ref|NP_126369.1| - 0.00032 21.3 0.2 0.0034 18.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 12 Host_attach PF10116.9 gi|14520894|ref|NP_126369.1| - 0.0027 18.3 0.0 0.0084 16.7 0.0 1.8 2 0 0 2 2 2 1 Protein required for attachment to host cells ADH_zinc_N PF00107.26 gi|14520894|ref|NP_126369.1| - 0.025 14.6 2.0 2 8.4 0.1 2.8 3 0 0 3 3 3 0 Zinc-binding dehydrogenase baeRF_family5 PF18846.1 gi|14520894|ref|NP_126369.1| - 0.048 13.9 0.1 0.21 11.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 5 Arg_tRNA_synt_N PF03485.16 gi|14520894|ref|NP_126369.1| - 0.097 13.3 0.0 0.39 11.3 0.0 2.0 1 0 0 1 1 1 0 Arginyl tRNA synthetase N terminal domain DUF4342 PF14242.6 gi|14520894|ref|NP_126369.1| - 0.13 12.3 1.8 0.91 9.6 0.3 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) tRNA-synt_1d PF00750.19 gi|14520895|ref|NP_126370.1| - 3.3e-40 138.1 0.5 1.3e-26 93.4 0.3 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|14520895|ref|NP_126370.1| - 1.2e-36 125.4 0.2 3.7e-36 123.9 0.1 1.9 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|14520895|ref|NP_126370.1| - 3.1e-15 56.5 0.5 1.7e-14 54.2 0.0 2.5 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 gi|14520895|ref|NP_126370.1| - 4.2e-05 23.0 0.0 6.2e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Exog_C PF18026.1 gi|14520895|ref|NP_126370.1| - 0.0033 17.4 0.5 0.0099 15.9 0.5 1.8 1 0 0 1 1 1 1 Endo/exonuclease (EXOG) C-terminal domain tRNA-synt_1 PF00133.22 gi|14520895|ref|NP_126370.1| - 0.0035 15.7 0.0 0.0067 14.7 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) DnaG_DnaB_bind PF08278.11 gi|14520895|ref|NP_126370.1| - 0.02 15.5 1.3 1.6 9.4 0.0 2.9 3 0 0 3 3 3 0 DNA primase DnaG DnaB-binding AAR2 PF05282.11 gi|14520895|ref|NP_126370.1| - 0.083 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 AAR2 protein DivIVA PF05103.13 gi|14520895|ref|NP_126370.1| - 0.086 12.9 5.2 0.16 12.1 0.3 2.8 2 1 1 3 3 3 0 DivIVA protein tRNA-synt_1g PF09334.11 gi|14520895|ref|NP_126370.1| - 0.096 11.4 0.0 0.29 9.8 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (M) UPF0179 PF03684.13 gi|33356709|ref|NP_877631.1| - 5e-42 143.1 0.0 5.9e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) Fe-ADH_2 PF13685.6 gi|14520897|ref|NP_126372.1| - 1.5e-69 234.4 0.7 1.9e-69 234.1 0.7 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|14520897|ref|NP_126372.1| - 3.1e-24 85.5 1.1 4.1e-23 81.8 0.7 1.8 1 1 1 2 2 2 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|14520897|ref|NP_126372.1| - 3.1e-12 46.2 0.5 1.2e-11 44.3 0.5 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase AP_endonuc_2 PF01261.24 gi|14520898|ref|NP_126373.1| - 1.9e-14 53.6 0.0 2.6e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel MukF_C PF17193.4 gi|14520898|ref|NP_126373.1| - 0.092 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 MukF C-terminal domain Imm49 PF15575.6 gi|14520899|ref|NP_126374.1| - 0.0055 16.5 0.4 3.5 7.3 0.1 2.0 1 1 0 1 1 1 1 Immunity protein 49 NPR1_like_C PF12313.8 gi|14520899|ref|NP_126374.1| - 0.084 12.4 0.2 0.099 12.2 0.2 1.1 1 0 0 1 1 1 0 NPR1/NIM1 like defence protein C terminal TPR_14 PF13428.6 gi|14520899|ref|NP_126374.1| - 0.18 12.7 0.9 7.4 7.7 0.1 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat UDG PF03167.19 gi|14520900|ref|NP_126375.1| - 2.6e-46 157.4 0.0 3.3e-46 157.1 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HTH_19 PF12844.7 gi|14520901|ref|NP_126376.1| - 1.8e-09 37.5 0.1 1.6e-08 34.4 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|14520901|ref|NP_126376.1| - 2.7e-09 37.0 0.0 6.5e-09 35.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|14520901|ref|NP_126376.1| - 7e-08 32.7 0.0 1.6e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|14520901|ref|NP_126376.1| - 0.034 14.2 0.0 0.044 13.9 0.0 1.4 1 1 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|14520901|ref|NP_126376.1| - 0.092 12.8 0.0 0.25 11.4 0.0 1.7 1 1 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_11 PF08279.12 gi|14520901|ref|NP_126376.1| - 0.1 12.5 0.1 0.44 10.5 0.0 2.1 2 0 0 2 2 2 0 HTH domain HTH_Crp_2 PF13545.6 gi|14520901|ref|NP_126376.1| - 0.14 12.2 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PPS_PS PF02006.16 gi|14520902|ref|NP_126377.1| - 4.2e-80 267.4 1.2 5.2e-80 267.1 1.2 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase OsmC PF02566.19 gi|14520903|ref|NP_126378.1| - 1.2e-15 57.8 0.0 1.6e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein Radical_SAM PF04055.21 gi|14520904|ref|NP_126379.1| - 4.7e-16 59.6 0.3 1.1e-15 58.4 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily DUF1848 PF08902.11 gi|14520904|ref|NP_126379.1| - 2.9e-06 27.2 5.5 0.0083 15.9 0.0 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF1848) FbpA PF05833.11 gi|14520906|ref|NP_126381.1| - 1.4e-85 287.8 23.3 2.1e-85 287.2 23.3 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|14520906|ref|NP_126381.1| - 2.6e-30 105.3 0.0 7e-30 103.9 0.0 1.8 1 0 0 1 1 1 1 NFACT protein RNA binding domain Ribosomal_S13 PF00416.22 gi|14520906|ref|NP_126381.1| - 4e-05 24.0 2.4 0.00024 21.5 0.1 2.9 2 0 0 2 2 2 1 Ribosomal protein S13/S18 H2TH PF06831.14 gi|14520906|ref|NP_126381.1| - 0.00011 22.1 0.0 0.00045 20.1 0.0 2.0 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain MCU PF04678.13 gi|14520906|ref|NP_126381.1| - 0.04 14.0 9.3 0.12 12.5 0.7 2.5 2 0 0 2 2 2 0 Mitochondrial calcium uniporter DSX_dimer PF08828.10 gi|14520906|ref|NP_126381.1| - 0.1 12.3 0.6 0.34 10.6 0.1 2.2 2 0 0 2 2 2 0 Doublesex dimerisation domain Sporozoite_P67 PF05642.11 gi|14520906|ref|NP_126381.1| - 0.29 9.2 1.7 0.45 8.5 1.7 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Syntaxin-6_N PF09177.11 gi|14520906|ref|NP_126381.1| - 0.63 10.6 6.8 2.5 8.7 2.3 2.7 2 0 0 2 2 2 0 Syntaxin 6, N-terminal DUF4140 PF13600.6 gi|14520906|ref|NP_126381.1| - 2.4 8.6 8.3 0.95 9.9 1.9 2.7 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) GatB_N PF02934.15 gi|14520907|ref|NP_126382.1| - 1.4e-65 221.4 0.0 2.3e-65 220.7 0.0 1.3 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|14520907|ref|NP_126382.1| - 8.5e-29 100.4 7.6 1.6e-28 99.5 4.1 2.7 2 0 0 2 2 2 1 GatB domain GAD PF02938.14 gi|14520907|ref|NP_126382.1| - 8.5e-19 67.6 1.1 2.7e-18 66.0 0.1 2.4 2 1 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|14520907|ref|NP_126382.1| - 2.9e-10 40.4 1.0 2.9e-10 40.4 1.0 2.9 3 0 0 3 3 3 1 Yqey-like protein DUF4473 PF14747.6 gi|14520907|ref|NP_126382.1| - 0.00071 20.1 0.0 2 9.1 0.0 3.4 3 1 0 3 3 3 2 Domain of unknown function (DUF4473) SAPIS-gp6 PF16722.5 gi|14520907|ref|NP_126382.1| - 0.0092 16.4 2.0 0.019 15.4 0.2 2.5 3 0 0 3 3 3 1 Pathogenicity island protein gp6 in Staphylococcus DUF1967 PF09269.11 gi|14520907|ref|NP_126382.1| - 0.046 13.7 1.7 3.8 7.5 0.1 3.6 3 1 0 3 3 3 0 Domain of unknown function (DUF1967) NAD_Gly3P_dh_N PF01210.23 gi|14520907|ref|NP_126382.1| - 0.16 12.0 0.6 0.58 10.1 0.3 2.2 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RecX PF02631.16 gi|14520907|ref|NP_126382.1| - 1.1 9.7 6.3 1.4 9.4 0.2 3.3 3 0 0 3 3 3 0 RecX family Asparaginase PF00710.20 gi|14520908|ref|NP_126383.1| - 4.8e-64 215.4 0.1 1.3e-63 214.1 0.0 1.7 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|14520908|ref|NP_126383.1| - 5.7e-38 129.6 0.0 1.3e-37 128.5 0.0 1.6 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|14520908|ref|NP_126383.1| - 5.4e-20 70.5 0.8 1.2e-19 69.3 0.8 1.6 1 0 0 1 1 1 1 GatD N-terminal domain Fucose_iso_C PF02952.17 gi|14520909|ref|NP_126384.1| - 1.6e-14 53.8 0.0 2.3e-14 53.3 0.0 1.3 1 0 0 1 1 1 1 L-fucose isomerase, C-terminal domain DUF3343 PF11823.8 gi|33356710|ref|NP_877632.1| - 0.1 12.0 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) PfkB PF00294.24 gi|14520910|ref|NP_126385.1| - 7.2e-59 199.6 0.0 1.3e-58 198.7 0.0 1.3 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Lipoprotein_20 PF13942.6 gi|14520910|ref|NP_126385.1| - 0.18 11.7 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 YfhG lipoprotein Intein_splicing PF14890.6 gi|14520911|ref|NP_126386.1| - 1.3e-22 80.2 0.1 8.5e-22 77.5 0.1 2.2 2 0 0 2 2 2 1 Intein splicing domain Radical_SAM PF04055.21 gi|14520911|ref|NP_126386.1| - 6.8e-19 68.9 5.4 5.5e-14 52.9 0.0 3.3 3 0 0 3 3 3 2 Radical SAM superfamily LAGLIDADG_3 PF14528.6 gi|14520911|ref|NP_126386.1| - 2.5e-17 62.9 0.3 4.4e-13 49.4 0.1 2.7 2 0 0 2 2 2 2 LAGLIDADG-like domain Fer4_12 PF13353.6 gi|14520911|ref|NP_126386.1| - 2.7e-06 27.7 0.5 0.073 13.3 0.0 3.0 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14520911|ref|NP_126386.1| - 0.0074 16.4 4.4 0.39 10.9 0.0 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain PBS_linker_poly PF00427.21 gi|14520911|ref|NP_126386.1| - 0.054 13.5 0.2 0.21 11.7 0.1 2.0 2 0 0 2 2 2 0 Phycobilisome Linker polypeptide MNHE PF01899.16 gi|14520912|ref|NP_126387.1| - 4.1e-48 162.8 0.4 4.6e-48 162.7 0.4 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit YdjM PF04307.14 gi|14520912|ref|NP_126387.1| - 0.011 15.1 0.5 0.014 14.7 0.5 1.2 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase MrpF_PhaF PF04066.13 gi|14520913|ref|NP_126388.1| - 1.8e-19 69.9 11.8 1.8e-19 69.9 11.8 1.9 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) IncD PF17628.2 gi|14520913|ref|NP_126388.1| - 0.026 14.3 5.5 0.037 13.8 5.5 1.4 1 1 0 1 1 1 0 Inclusion membrane protein D DUF2417 PF10329.9 gi|14520913|ref|NP_126388.1| - 1.3 8.4 5.6 1.6 8.1 5.6 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF2651 PF10852.8 gi|14520913|ref|NP_126388.1| - 2.1 9.0 10.7 0.067 13.8 3.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2651) PAP2 PF01569.21 gi|14520913|ref|NP_126388.1| - 6.8 6.5 8.9 1.1 9.1 3.7 1.9 2 0 0 2 2 2 0 PAP2 superfamily PhaG_MnhG_YufB PF03334.14 gi|14520914|ref|NP_126389.1| - 7.7e-23 80.5 6.8 9.4e-23 80.3 6.8 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit YjbE PF11106.8 gi|14520914|ref|NP_126389.1| - 0.6 10.4 3.8 0.63 10.3 2.8 1.5 1 1 1 2 2 2 0 Exopolysaccharide production protein YjbE DUF4040 PF13244.6 gi|33356712|ref|NP_877634.1| - 1.5e-18 66.7 8.4 1.7e-18 66.5 8.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) TspO_MBR PF03073.15 gi|33356712|ref|NP_877634.1| - 0.00069 19.7 2.7 0.00082 19.4 2.7 1.1 1 0 0 1 1 1 1 TspO/MBR family Phage_r1t_holin PF16945.5 gi|33356712|ref|NP_877634.1| - 0.018 15.2 2.2 0.018 15.2 2.2 1.5 1 1 0 1 1 1 0 Putative lactococcus lactis phage r1t holin DUF2721 PF11026.8 gi|33356712|ref|NP_877634.1| - 0.023 14.6 5.9 0.046 13.6 5.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF1129 PF06570.11 gi|33356712|ref|NP_877634.1| - 0.028 13.9 0.2 0.055 13.0 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF2070 PF09843.9 gi|33356712|ref|NP_877634.1| - 0.12 10.6 1.5 0.14 10.4 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) B12D PF06522.11 gi|33356712|ref|NP_877634.1| - 5.4 6.9 7.0 9.7 6.1 0.7 2.3 1 1 1 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Phage_holin_5_2 PF16079.5 gi|33356712|ref|NP_877634.1| - 6.4 7.2 9.0 13 6.2 1.8 2.1 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V MnhB PF04039.13 gi|14520915|ref|NP_126390.1| - 1.4e-22 80.3 14.5 1.4e-22 80.3 14.5 2.2 2 1 1 3 3 3 1 Domain related to MnhB subunit of Na+/H+ antiporter Phage_holin_3_6 PF07332.11 gi|14520915|ref|NP_126390.1| - 3.2 7.8 9.7 3.4 7.7 1.8 2.6 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Oxidored_q2 PF00420.24 gi|14520916|ref|NP_126391.1| - 2.1e-32 110.9 4.8 2.5e-32 110.6 4.8 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.9 gi|14520916|ref|NP_126391.1| - 0.0024 17.8 4.0 0.0024 17.8 4.0 1.9 2 0 0 2 2 2 1 Predicted membrane protein (DUF2108) YbhQ PF11076.8 gi|14520916|ref|NP_126391.1| - 2.1 8.4 7.2 0.44 10.5 3.1 1.8 2 0 0 2 2 2 0 Putative inner membrane protein YbhQ Proton_antipo_M PF00361.20 gi|14520917|ref|NP_126392.1| - 3.5e-64 216.8 24.7 3.5e-64 216.8 24.7 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 gi|14520917|ref|NP_126392.1| - 7.3e-07 28.8 13.2 7.3e-07 28.8 13.2 2.3 2 1 0 2 2 2 1 NADH dehydrogenase I, subunit N related protein Tmp39 PF10271.9 gi|14520917|ref|NP_126392.1| - 0.011 14.8 2.9 0.25 10.3 0.1 2.4 2 0 0 2 2 2 0 Putative transmembrane protein Tail_VII PF17091.5 gi|14520917|ref|NP_126392.1| - 0.43 10.5 5.4 0.15 11.9 1.2 2.5 2 0 0 2 2 2 0 Inovirus G7P protein PIRT PF15099.6 gi|14520917|ref|NP_126392.1| - 1.6 8.3 9.5 0.078 12.6 0.4 3.0 2 1 0 2 2 2 0 Phosphoinositide-interacting protein family Antimicrobial10 PF08105.11 gi|14520917|ref|NP_126392.1| - 5.3 7.2 6.8 18 5.5 0.1 4.0 3 0 0 3 3 3 0 Metchnikowin family Proton_antipo_M PF00361.20 gi|14520918|ref|NP_126393.1| - 4.1e-61 206.7 28.0 4.1e-61 206.7 28.0 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter SLATT_fungal PF18142.1 gi|14520918|ref|NP_126393.1| - 0.67 10.0 4.3 1 9.3 0.4 3.2 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain NADHdh PF00146.21 gi|14520919|ref|NP_126394.1| - 6.8e-55 186.5 24.6 8.3e-55 186.2 24.6 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.22 gi|14520920|ref|NP_126395.1| - 2.8e-19 69.3 0.0 3.8e-19 68.8 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit RE_NgoFVII PF09565.10 gi|14520920|ref|NP_126395.1| - 0.11 11.8 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 NgoFVII restriction endonuclease EKAL PF17986.1 gi|14520920|ref|NP_126395.1| - 0.23 11.5 2.9 6 7.0 2.1 2.4 1 1 1 2 2 2 0 EMP3-KAHRP-like N-terminal domain Complex1_30kDa PF00329.19 gi|14520921|ref|NP_126396.1| - 4.9e-25 88.5 0.4 6e-25 88.2 0.4 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.19 gi|14520922|ref|NP_126397.1| - 1.2e-73 247.6 0.0 7e-72 241.8 0.0 2.2 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Fer4 PF00037.27 gi|14520923|ref|NP_126398.1| - 1.1e-14 53.5 10.5 6.5e-08 32.1 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520923|ref|NP_126398.1| - 2.1e-12 47.4 9.2 4.4e-12 46.4 9.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14520923|ref|NP_126398.1| - 2.2e-10 40.5 16.7 1.9e-07 31.1 8.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14520923|ref|NP_126398.1| - 3.3e-08 34.4 5.1 0.0017 19.2 0.3 2.7 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|14520923|ref|NP_126398.1| - 3.9e-08 33.3 18.6 3.7e-06 26.9 10.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14520923|ref|NP_126398.1| - 4.9e-08 33.0 7.7 1.5e-07 31.5 8.0 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14520923|ref|NP_126398.1| - 7.6e-06 25.7 12.1 0.0072 16.4 3.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14520923|ref|NP_126398.1| - 3.7e-05 23.6 13.0 0.0018 18.2 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14520923|ref|NP_126398.1| - 0.00027 21.3 8.8 0.00076 19.9 8.8 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14520923|ref|NP_126398.1| - 0.00035 21.3 5.8 0.17 12.6 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|14520923|ref|NP_126398.1| - 0.0014 18.8 9.6 0.018 15.2 1.0 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|14520923|ref|NP_126398.1| - 0.0026 18.3 10.4 0.52 10.9 1.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|14520923|ref|NP_126398.1| - 0.0026 18.6 16.7 0.02 15.8 4.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|14520923|ref|NP_126398.1| - 0.012 16.1 13.3 0.4 11.3 4.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|14520923|ref|NP_126398.1| - 0.014 16.2 3.8 1 10.2 0.5 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|14520923|ref|NP_126398.1| - 0.016 15.8 9.2 0.23 12.0 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I DFP PF04127.15 gi|14520924|ref|NP_126399.1| - 1.6e-57 194.4 5.2 9e-56 188.7 2.3 2.2 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|14520924|ref|NP_126399.1| - 1e-42 145.5 6.6 1.7e-41 141.6 2.9 2.3 2 0 0 2 2 2 2 Flavoprotein PTS_IIB PF02302.17 gi|14520924|ref|NP_126399.1| - 0.0014 19.2 6.2 0.22 12.3 0.8 3.7 3 0 0 3 3 3 1 PTS system, Lactose/Cellobiose specific IIB subunit LpxI_N PF17930.1 gi|14520924|ref|NP_126399.1| - 0.02 14.8 2.8 0.052 13.4 0.5 2.6 2 1 1 3 3 3 0 LpxI N-terminal domain Metalloenzyme PF01676.18 gi|14520924|ref|NP_126399.1| - 0.035 13.5 0.0 0.15 11.4 0.0 2.2 1 1 0 1 1 1 0 Metalloenzyme superfamily DpaA_N PF16924.5 gi|14520924|ref|NP_126399.1| - 0.068 13.3 1.8 17 5.5 0.1 3.6 2 2 1 3 3 3 0 Dipicolinate synthase subunit A N-terminal domain GST_C PF00043.25 gi|14520924|ref|NP_126399.1| - 0.1 12.8 0.1 19 5.6 0.0 2.9 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Epimerase PF01370.21 gi|14520924|ref|NP_126399.1| - 0.14 11.6 0.0 0.35 10.3 0.0 1.6 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Lon_C PF05362.13 gi|14520925|ref|NP_126400.1| - 4.3e-15 55.8 1.6 8.8e-15 54.8 1.6 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 gi|14520925|ref|NP_126400.1| - 0.0002 21.2 0.2 0.00082 19.2 0.0 2.0 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase DUF357 PF04010.13 gi|14520925|ref|NP_126400.1| - 0.14 12.2 15.1 0.33 11.0 1.3 4.2 4 0 0 4 4 4 0 Protein of unknown function (DUF357) DUF2564 PF10819.8 gi|14520925|ref|NP_126400.1| - 0.67 10.4 4.6 13 6.2 0.0 3.5 2 1 1 4 4 4 0 Protein of unknown function (DUF2564) HEPN PF05168.14 gi|14520925|ref|NP_126400.1| - 1.1 9.4 11.6 2.7 8.2 7.0 3.3 2 1 0 2 2 2 0 HEPN domain PAPS_reduct PF01507.19 gi|14520926|ref|NP_126401.1| - 6.6e-41 140.2 0.0 1.2e-40 139.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|14520926|ref|NP_126401.1| - 1.4e-05 24.7 0.0 2.9e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|14520926|ref|NP_126401.1| - 0.0062 15.7 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 NAD synthase Diphthami_syn_2 PF01902.17 gi|14520926|ref|NP_126401.1| - 0.0079 15.7 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Diphthamide synthase tRNA_Me_trans PF03054.16 gi|14520926|ref|NP_126401.1| - 0.078 11.8 0.0 0.25 10.1 0.0 1.8 2 0 0 2 2 2 0 tRNA methyl transferase OKR_DC_1_N PF03709.15 gi|14520926|ref|NP_126401.1| - 0.12 12.7 0.0 0.33 11.2 0.0 1.8 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain ATP_bind_3 PF01171.20 gi|14520926|ref|NP_126401.1| - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 PP-loop family Fer4 PF00037.27 gi|14520927|ref|NP_126402.1| - 4.9e-15 54.6 13.5 9.3e-08 31.6 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14520927|ref|NP_126402.1| - 3.4e-12 46.7 21.4 2.4e-06 28.0 0.7 2.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14520927|ref|NP_126402.1| - 1.9e-11 43.9 17.5 3.8e-08 33.3 11.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14520927|ref|NP_126402.1| - 3.1e-11 43.3 8.0 5.1e-11 42.6 8.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14520927|ref|NP_126402.1| - 5.5e-11 42.1 14.2 1.5e-07 31.2 4.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14520927|ref|NP_126402.1| - 1.2e-10 42.2 7.5 3.7e-06 27.8 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|14520927|ref|NP_126402.1| - 3.5e-09 36.2 13.3 4.8e-07 29.5 3.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14520927|ref|NP_126402.1| - 5.4e-07 29.6 14.7 0.001 19.1 4.8 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14520927|ref|NP_126402.1| - 5.6e-07 29.6 14.8 0.004 17.6 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14520927|ref|NP_126402.1| - 9.2e-07 29.3 7.2 0.0013 19.2 0.2 2.4 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14520927|ref|NP_126402.1| - 1.9e-06 28.2 9.0 0.0016 18.9 0.4 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|14520927|ref|NP_126402.1| - 0.00023 21.9 21.5 0.0066 17.3 5.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|14520927|ref|NP_126402.1| - 0.00034 20.8 18.0 0.023 14.9 2.7 2.8 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|14520927|ref|NP_126402.1| - 0.0051 17.3 12.1 0.01 16.4 0.5 2.6 1 1 1 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|14520927|ref|NP_126402.1| - 0.031 15.1 12.5 0.34 11.8 2.0 2.5 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14520927|ref|NP_126402.1| - 0.073 13.8 12.4 0.35 11.6 1.9 2.4 2 1 0 2 2 2 0 4Fe-4S single cluster domain ATPase PF06745.13 gi|14520927|ref|NP_126402.1| - 0.12 11.7 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 KaiC Fer4_19 PF06902.11 gi|14520927|ref|NP_126402.1| - 0.25 11.4 7.1 1.1 9.3 5.4 2.5 2 1 0 2 2 1 0 Divergent 4Fe-4S mono-cluster ETF_QO PF05187.13 gi|14520927|ref|NP_126402.1| - 0.55 10.4 7.3 0.5 10.5 1.4 2.7 1 1 2 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S NADHdh PF00146.21 gi|14520928|ref|NP_126403.1| - 3.8e-56 190.6 22.3 4.7e-56 190.3 22.3 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF1842 PF08896.10 gi|14520928|ref|NP_126403.1| - 0.088 13.1 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) Complex1_49kDa PF00346.19 gi|14520929|ref|NP_126404.1| - 3e-59 200.3 0.0 6e-58 196.1 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|14520929|ref|NP_126404.1| - 1.4e-20 73.7 1.9 2.5e-13 49.8 0.2 4.0 4 0 0 4 4 4 4 Nickel-dependent hydrogenase Complex1_30kDa PF00329.19 gi|14520930|ref|NP_126405.1| - 1.4e-21 77.3 0.0 1.9e-21 76.9 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Oxidored_q6 PF01058.22 gi|14520931|ref|NP_126406.1| - 7.8e-28 96.9 0.0 1e-27 96.5 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Proton_antipo_M PF00361.20 gi|14520933|ref|NP_126408.1| - 4.1e-63 213.3 24.8 4.1e-63 213.3 24.8 2.0 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|14520933|ref|NP_126408.1| - 2.7e-13 49.8 2.3 5.8e-13 48.7 0.4 2.5 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADHdeh_related PF10125.9 gi|14520933|ref|NP_126408.1| - 2.1e-07 30.5 9.5 2.1e-07 30.5 9.5 3.6 2 2 1 4 4 4 2 NADH dehydrogenase I, subunit N related protein Oxidored_q2 PF00420.24 gi|33356713|ref|NP_126409.2| - 1.1e-26 92.5 3.7 1.4e-26 92.2 3.7 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.9 gi|33356713|ref|NP_126409.2| - 0.016 15.1 2.4 0.016 15.1 2.4 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2108) SLATT_6 PF18169.1 gi|33356713|ref|NP_126409.2| - 0.11 12.1 2.3 0.8 9.3 0.7 2.1 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 MHYT PF03707.16 gi|33356713|ref|NP_126409.2| - 0.6 10.3 4.7 2.2 8.5 0.5 2.4 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat MnhB PF04039.13 gi|14520935|ref|NP_126410.1| - 1.2e-26 93.4 11.4 1.5e-26 93.2 11.4 1.1 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF2106 PF09879.9 gi|33356714|ref|NP_877635.1| - 0.076 12.5 0.1 0.076 12.5 0.1 1.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2106) PhaG_MnhG_YufB PF03334.14 gi|14520936|ref|NP_126411.1| - 3e-23 81.8 5.2 3.6e-23 81.6 5.2 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit MASE3 PF17159.4 gi|14520936|ref|NP_126411.1| - 0.037 13.7 1.6 0.045 13.4 1.6 1.1 1 0 0 1 1 1 0 Membrane-associated sensor domain Nuc_H_symport PF03825.16 gi|14520936|ref|NP_126411.1| - 0.055 12.4 0.7 0.058 12.4 0.7 1.0 1 0 0 1 1 1 0 Nucleoside H+ symporter MrpF_PhaF PF04066.13 gi|33356716|ref|NP_126412.2| - 5.8e-21 74.6 7.5 5.8e-21 74.6 7.5 2.0 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) Phage_holin_3_6 PF07332.11 gi|33356716|ref|NP_126412.2| - 2.9 7.9 10.1 9.2 6.4 10.1 1.8 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III MNHE PF01899.16 gi|14520938|ref|NP_126413.1| - 2.3e-43 147.4 0.2 2.6e-43 147.3 0.2 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit 12TM_1 PF09847.9 gi|14520938|ref|NP_126413.1| - 0.012 14.8 2.5 0.013 14.7 2.5 1.0 1 0 0 1 1 1 0 Membrane protein of 12 TMs Pyr_redox_2 PF07992.14 gi|14520939|ref|NP_126414.1| - 8.8e-62 209.0 3.5 1e-61 208.8 3.5 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|14520939|ref|NP_126414.1| - 1.1e-27 97.0 5.4 3.2e-22 79.1 0.5 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14520939|ref|NP_126414.1| - 1.5e-22 79.9 11.0 2e-19 69.9 1.5 3.9 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|14520939|ref|NP_126414.1| - 1.5e-14 53.9 6.0 3.3e-06 26.5 0.3 4.2 4 1 0 4 4 4 4 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|14520939|ref|NP_126414.1| - 2.4e-10 40.3 3.5 3.1e-07 30.1 0.0 3.1 2 1 1 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|14520939|ref|NP_126414.1| - 5.8e-10 38.8 7.9 1.5e-06 27.5 0.4 4.7 3 2 2 5 5 5 2 FAD binding domain FAD_binding_3 PF01494.19 gi|14520939|ref|NP_126414.1| - 8.1e-09 35.2 1.9 0.00078 18.8 0.1 2.8 2 2 2 4 4 4 2 FAD binding domain HI0933_like PF03486.14 gi|14520939|ref|NP_126414.1| - 1.2e-07 30.8 1.6 0.0014 17.4 0.3 3.7 4 1 0 4 4 4 2 HI0933-like protein Thi4 PF01946.17 gi|14520939|ref|NP_126414.1| - 1.9e-07 30.6 0.5 0.00015 21.1 0.2 2.4 2 0 0 2 2 2 2 Thi4 family DAO PF01266.24 gi|14520939|ref|NP_126414.1| - 1e-06 28.6 9.5 0.039 13.5 1.2 4.0 3 1 1 4 4 4 3 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|14520939|ref|NP_126414.1| - 3.5e-06 27.4 0.8 0.003 18.0 0.2 3.2 3 1 0 3 3 3 1 Putative NAD(P)-binding NAD_binding_8 PF13450.6 gi|14520939|ref|NP_126414.1| - 0.00013 22.1 1.6 0.015 15.5 0.2 2.6 2 1 0 2 2 2 1 NAD(P)-binding Rossmann-like domain PALP PF00291.25 gi|14520939|ref|NP_126414.1| - 0.00015 21.3 0.1 0.031 13.7 0.0 2.4 2 1 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme K_oxygenase PF13434.6 gi|14520939|ref|NP_126414.1| - 0.00027 20.2 0.4 0.2 10.7 0.0 3.3 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Shikimate_DH PF01488.20 gi|14520939|ref|NP_126414.1| - 0.00058 19.9 0.3 0.23 11.5 0.0 2.8 3 0 0 3 3 3 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|14520939|ref|NP_126414.1| - 0.0057 16.0 6.4 0.052 12.8 0.2 2.5 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.6 gi|14520939|ref|NP_126414.1| - 0.007 16.9 0.0 0.57 10.7 0.0 2.3 2 0 0 2 2 2 1 XdhC Rossmann domain Lycopene_cycl PF05834.12 gi|14520939|ref|NP_126414.1| - 0.019 14.0 0.6 0.49 9.4 0.3 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|14520939|ref|NP_126414.1| - 0.074 11.9 5.2 0.22 10.3 0.3 2.6 2 1 0 2 2 2 0 Tryptophan halogenase Aminotran_3 PF00202.21 gi|14520940|ref|NP_126415.1| - 3.2e-118 394.9 0.0 3.8e-118 394.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|14520940|ref|NP_126415.1| - 0.0027 16.9 0.0 0.088 12.0 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class I and II DUF3198 PF11433.8 gi|14520940|ref|NP_126415.1| - 0.03 14.2 1.2 0.37 10.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Hydrolase_3 PF08282.12 gi|14520943|ref|NP_126418.1| - 6.2e-31 108.1 0.0 1.1e-17 64.7 0.0 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14520943|ref|NP_126418.1| - 9.3e-14 52.2 1.1 1.3e-11 45.2 1.1 3.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|14520943|ref|NP_126418.1| - 0.00011 22.7 0.5 0.023 15.1 0.0 2.8 1 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|14520943|ref|NP_126418.1| - 0.0022 18.1 0.0 0.006 16.7 0.0 1.7 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|14520943|ref|NP_126418.1| - 0.0086 16.2 0.0 0.019 15.1 0.0 1.6 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Prenyltrans PF00432.21 gi|14520944|ref|NP_126419.1| - 8.7e-06 25.4 9.2 0.02 14.6 0.0 6.3 8 0 0 8 8 8 3 Prenyltransferase and squalene oxidase repeat Med28 PF11594.8 gi|14520945|ref|NP_126420.1| - 0.12 12.5 2.5 0.55 10.3 0.8 2.1 1 1 1 2 2 2 0 Mediator complex subunit 28 YabA PF06156.13 gi|14520945|ref|NP_126420.1| - 0.14 12.9 9.3 0.057 14.1 6.6 1.8 2 1 0 2 2 2 0 Initiation control protein YabA Sugarporin_N PF11471.8 gi|14520945|ref|NP_126420.1| - 0.28 11.2 3.2 0.57 10.2 3.2 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension TSC22 PF01166.18 gi|14520945|ref|NP_126420.1| - 0.38 11.1 6.7 1.6 9.1 0.8 2.3 2 0 0 2 2 2 0 TSC-22/dip/bun family FapA PF03961.13 gi|14520945|ref|NP_126420.1| - 0.74 8.3 4.2 0.78 8.3 4.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2671 PF10877.8 gi|14520946|ref|NP_126421.1| - 0.025 14.4 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) CAP_assoc_N PF14504.6 gi|14520946|ref|NP_126421.1| - 0.054 13.2 0.1 0.063 13.0 0.1 1.2 1 0 0 1 1 1 0 CAP-associated N-terminal DUF4474 PF14751.6 gi|14520946|ref|NP_126421.1| - 0.12 11.8 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4474) Met_10 PF02475.16 gi|14520947|ref|NP_126422.1| - 9.3e-75 250.7 1.9 1.3e-74 250.3 1.9 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|14520947|ref|NP_126422.1| - 3.6e-18 65.2 0.3 8.7e-18 64.0 0.3 1.7 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain PrmA PF06325.13 gi|14520947|ref|NP_126422.1| - 3.1e-08 33.4 0.0 5.3e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|14520947|ref|NP_126422.1| - 1e-05 25.1 0.0 1.9e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.16 gi|14520947|ref|NP_126422.1| - 0.00013 21.3 0.0 0.00018 20.8 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase DNA_methylase PF00145.17 gi|14520947|ref|NP_126422.1| - 0.00025 20.5 0.0 0.00046 19.6 0.0 1.4 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|14520947|ref|NP_126422.1| - 0.00046 19.8 0.0 0.00088 18.9 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|14520947|ref|NP_126422.1| - 0.00061 20.4 0.0 0.0025 18.5 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|14520947|ref|NP_126422.1| - 0.0011 18.1 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 gi|14520947|ref|NP_126422.1| - 0.0011 18.8 0.0 0.0018 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|14520947|ref|NP_126422.1| - 0.0012 18.5 0.0 0.0021 17.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltr_RsmB-F PF01189.17 gi|14520947|ref|NP_126422.1| - 0.0016 18.1 0.0 0.0043 16.7 0.0 1.7 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 gi|14520947|ref|NP_126422.1| - 0.012 15.5 0.0 0.041 13.8 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14520947|ref|NP_126422.1| - 0.086 12.7 0.0 0.89 9.4 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain XPG_I PF00867.18 gi|14520948|ref|NP_126423.1| - 9.8e-29 99.6 0.0 2.2e-28 98.4 0.0 1.6 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|14520948|ref|NP_126423.1| - 2.1e-23 82.7 0.0 5.1e-23 81.5 0.0 1.6 1 0 0 1 1 1 1 XPG N-terminal domain DUF5059 PF16502.5 gi|14520948|ref|NP_126423.1| - 0.22 10.2 0.7 1.2 7.8 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5059) TPR_2 PF07719.17 gi|14520948|ref|NP_126423.1| - 0.31 11.3 3.0 0.58 10.4 0.5 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF1771 PF08590.10 gi|14520948|ref|NP_126423.1| - 6.5 7.2 10.9 1.3 9.4 3.8 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1771) PsiE PF06146.12 gi|14520949|ref|NP_126424.1| - 6e-17 61.8 5.0 6e-17 61.8 5.0 1.6 2 0 0 2 2 2 1 Phosphate-starvation-inducible E DUF1206 PF06724.11 gi|14520949|ref|NP_126424.1| - 0.018 15.1 2.3 0.26 11.4 0.3 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1206) DUF2208 PF09973.9 gi|14520949|ref|NP_126424.1| - 0.056 13.1 5.2 0.081 12.5 5.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) HIG_1_N PF04588.13 gi|14520949|ref|NP_126424.1| - 0.11 12.7 0.6 1.2 9.4 0.0 2.4 2 0 0 2 2 2 0 Hypoxia induced protein conserved region DUF2207 PF09972.9 gi|14520949|ref|NP_126424.1| - 0.68 8.6 2.4 0.81 8.4 2.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MerC PF03203.14 gi|14520949|ref|NP_126424.1| - 1.5 9.3 8.0 1.1 9.8 4.3 1.9 1 1 1 2 2 2 0 MerC mercury resistance protein ABC_tran PF00005.27 gi|14520950|ref|NP_126425.1| - 1.6e-31 109.6 0.0 2.2e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14520950|ref|NP_126425.1| - 4.4e-19 68.7 0.2 7.4e-19 68.0 0.2 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|14520950|ref|NP_126425.1| - 7.3e-09 35.9 1.2 4.1e-07 30.1 0.3 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520950|ref|NP_126425.1| - 4e-06 26.4 0.1 1.8e-05 24.3 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|14520950|ref|NP_126425.1| - 4.3e-05 23.8 0.6 0.00024 21.4 0.6 1.9 1 1 0 1 1 1 1 AAA domain ATP-synt_ab PF00006.25 gi|14520950|ref|NP_126425.1| - 0.013 15.2 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.29 gi|14520950|ref|NP_126425.1| - 0.018 15.5 0.0 0.1 13.1 0.0 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|14520950|ref|NP_126425.1| - 0.024 15.0 0.1 0.036 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 gi|14520950|ref|NP_126425.1| - 0.024 14.0 0.1 0.46 9.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein SRP54 PF00448.22 gi|14520950|ref|NP_126425.1| - 0.033 13.8 0.0 0.053 13.2 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain PRK PF00485.18 gi|14520950|ref|NP_126425.1| - 0.044 13.5 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_5 PF07728.14 gi|14520950|ref|NP_126425.1| - 0.048 13.7 0.1 0.17 11.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SbcCD_C PF13558.6 gi|14520950|ref|NP_126425.1| - 0.11 12.7 0.0 1.2 9.4 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 gi|14520950|ref|NP_126425.1| - 0.14 11.9 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|14520950|ref|NP_126425.1| - 0.25 10.9 0.3 17 5.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|14520950|ref|NP_126425.1| - 0.27 9.8 0.0 0.75 8.4 0.0 1.7 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 gi|14520951|ref|NP_126426.1| - 3.6e-25 89.1 0.0 5.3e-25 88.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14520951|ref|NP_126426.1| - 1.1e-20 73.8 0.0 2.4e-20 72.8 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|14520951|ref|NP_126426.1| - 7.6e-07 29.2 0.0 7.9e-05 22.6 0.0 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520951|ref|NP_126426.1| - 0.0069 15.8 0.1 0.097 12.1 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AP_endonuc_2_N PF07582.12 gi|14520951|ref|NP_126426.1| - 0.011 15.4 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 AP endonuclease family 2 C terminus IstB_IS21 PF01695.17 gi|14520951|ref|NP_126426.1| - 0.014 15.1 0.1 0.63 9.7 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.17 gi|14520951|ref|NP_126426.1| - 0.043 13.9 0.0 0.26 11.4 0.0 1.9 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_16 PF13191.6 gi|14520951|ref|NP_126426.1| - 0.049 14.0 0.0 0.067 13.6 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|14520951|ref|NP_126426.1| - 0.053 13.9 0.3 1.1 9.7 0.3 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 gi|14520951|ref|NP_126426.1| - 0.054 12.4 0.0 0.19 10.6 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.6 gi|14520951|ref|NP_126426.1| - 0.055 13.7 0.2 0.17 12.1 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|14520951|ref|NP_126426.1| - 0.11 12.1 0.0 17 4.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 gi|14520951|ref|NP_126426.1| - 0.13 11.9 0.0 0.19 11.4 0.0 1.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_13 PF13166.6 gi|14520951|ref|NP_126426.1| - 0.14 10.8 0.0 1.4 7.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|14520952|ref|NP_126427.1| - 3.8e-33 114.8 6.9 3.8e-33 114.8 6.9 2.3 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|14520952|ref|NP_126427.1| - 1.4e-09 37.7 3.3 1.4e-09 37.7 3.3 3.0 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|14520953|ref|NP_126428.1| - 1.4e-44 152.0 13.2 1.4e-44 152.0 13.2 2.1 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|14520954|ref|NP_126429.1| - 3.6e-72 243.4 13.0 8.5e-72 242.2 13.0 1.6 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle AA_kinase PF00696.28 gi|14520955|ref|NP_126430.1| - 2.5e-31 109.2 0.4 6.5e-31 107.8 0.4 1.6 1 1 0 1 1 1 1 Amino acid kinase family PALP PF00291.25 gi|14520956|ref|NP_126431.1| - 5.1e-69 232.9 0.1 7.7e-69 232.3 0.1 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HTH_45 PF14947.6 gi|14520956|ref|NP_126431.1| - 6.6e-06 26.0 0.3 0.0021 18.0 0.4 2.7 1 1 1 2 2 2 1 Winged helix-turn-helix PadR PF03551.14 gi|14520956|ref|NP_126431.1| - 1.7e-05 24.7 1.6 0.0022 17.9 2.0 2.6 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_5 PF01022.20 gi|14520956|ref|NP_126431.1| - 2.3e-05 24.2 0.0 5.7e-05 22.9 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family ACP_syn_III_C PF08541.10 gi|14520956|ref|NP_126431.1| - 0.00034 20.7 0.0 0.0047 17.1 0.0 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DUF4364 PF14277.6 gi|14520956|ref|NP_126431.1| - 0.0027 17.5 0.0 0.013 15.3 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) HTH_27 PF13463.6 gi|14520956|ref|NP_126431.1| - 0.011 16.3 0.0 0.078 13.5 0.0 2.4 3 0 0 3 3 3 0 Winged helix DNA-binding domain HxlR PF01638.17 gi|14520956|ref|NP_126431.1| - 0.012 15.5 0.1 0.035 14.0 0.1 1.8 2 0 0 2 2 2 0 HxlR-like helix-turn-helix SMC_ScpB PF04079.16 gi|14520956|ref|NP_126431.1| - 0.019 14.6 0.1 0.82 9.3 0.0 2.4 2 0 0 2 2 2 0 Segregation and condensation complex subunit ScpB DUF1495 PF07381.11 gi|14520956|ref|NP_126431.1| - 0.027 14.3 0.0 0.07 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) DUF2250 PF10007.9 gi|14520956|ref|NP_126431.1| - 0.032 14.3 1.4 0.24 11.5 0.2 2.6 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_20 PF12840.7 gi|14520956|ref|NP_126431.1| - 0.049 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain KH_7 PF17214.3 gi|14520957|ref|NP_126432.1| - 4.2e-29 100.3 5.6 1.1e-26 92.6 1.5 2.6 2 0 0 2 2 2 2 KH domain Beta-Casp PF10996.8 gi|14520957|ref|NP_126432.1| - 1.9e-26 92.5 0.0 3.6e-26 91.6 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|14520957|ref|NP_126432.1| - 1.1e-19 70.1 0.0 4.2e-19 68.2 0.0 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|14520957|ref|NP_126432.1| - 9e-10 38.3 0.0 1.6e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14520957|ref|NP_126432.1| - 5.3e-09 36.4 1.5 1.1e-07 32.1 1.5 2.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14520957|ref|NP_126432.1| - 2.9e-05 23.7 0.1 6.4e-05 22.6 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|14520957|ref|NP_126432.1| - 6.6e-05 22.7 4.9 0.0009 19.0 0.2 3.0 3 0 0 3 3 3 1 KH domain KH_1 PF00013.29 gi|14520957|ref|NP_126432.1| - 0.00022 21.0 0.1 0.065 13.1 0.1 3.2 3 0 0 3 3 3 1 KH domain KH_4 PF13083.6 gi|14520957|ref|NP_126432.1| - 0.01 15.7 0.4 0.067 13.1 0.1 2.5 2 0 0 2 2 2 0 KH domain Lactamase_B_3 PF13483.6 gi|14520957|ref|NP_126432.1| - 0.072 13.0 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Proteasome PF00227.26 gi|14520958|ref|NP_126433.1| - 2.6e-55 186.9 0.8 3e-55 186.7 0.8 1.0 1 0 0 1 1 1 1 Proteasome subunit Methyltrn_RNA_2 PF04013.12 gi|14520959|ref|NP_126434.1| - 4.9e-51 173.3 0.0 5.4e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase FKBP_C PF00254.28 gi|14520961|ref|NP_126436.1| - 9.8e-16 57.9 0.0 2.6e-15 56.5 0.0 1.8 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|14520961|ref|NP_126436.1| - 1.5e-06 28.2 2.8 1.6e-05 24.9 2.2 2.5 2 1 0 2 2 2 1 FKBP26_C-terminal DUF150_C PF17384.2 gi|14520961|ref|NP_126436.1| - 0.86 9.8 5.3 5.6 7.2 0.2 3.1 2 1 1 3 3 3 0 RimP C-terminal SH3 domain DS PF01916.17 gi|14520962|ref|NP_126437.1| - 6.9e-113 376.7 0.0 7.9e-113 376.5 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase DUF5457 PF17540.2 gi|14520962|ref|NP_126437.1| - 0.024 14.7 0.9 9.3 6.4 0.1 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5457) BLI1 PF17324.2 gi|14520962|ref|NP_126437.1| - 0.044 14.5 0.0 0.095 13.4 0.0 1.6 1 0 0 1 1 1 0 BLOC-1 interactor 1 S_layer_C PF05124.12 gi|14520964|ref|NP_126439.1| - 3.2e-56 190.8 5.5 3.2e-56 190.8 5.5 2.2 2 0 0 2 2 2 1 S-layer like family, C-terminal region S_layer_N PF05123.12 gi|14520964|ref|NP_126439.1| - 2.1e-52 178.7 11.1 2.1e-52 178.7 11.1 1.6 2 0 0 2 2 2 1 S-layer like family, N-terminal region Ribosomal_L5 PF00281.19 gi|14520965|ref|NP_126440.1| - 0.053 13.9 0.2 0.15 12.4 0.2 1.8 1 0 0 1 1 1 0 Ribosomal protein L5 Radical_SAM PF04055.21 gi|14520966|ref|NP_126441.1| - 8.9e-24 84.7 0.7 5.7e-22 78.9 0.1 2.7 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|14520966|ref|NP_126441.1| - 1.3e-08 35.3 0.1 2.9e-08 34.1 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DiS_P_DiS PF06750.13 gi|14520966|ref|NP_126441.1| - 0.0039 17.3 1.5 0.012 15.7 0.1 2.2 2 0 0 2 2 2 1 Bacterial Peptidase A24 N-terminal domain zf-ribbon_3 PF13248.6 gi|14520966|ref|NP_126441.1| - 0.065 12.7 8.1 2.5 7.6 0.0 3.3 3 0 0 3 3 3 0 zinc-ribbon domain DZR PF12773.7 gi|14520966|ref|NP_126441.1| - 0.09 12.8 2.3 0.22 11.6 0.0 2.4 2 1 0 2 2 2 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|14520966|ref|NP_126441.1| - 0.1 12.8 1.2 4.6 7.4 0.0 3.4 3 0 0 3 3 3 0 Zinc ribbon domain Fer4_14 PF13394.6 gi|14520966|ref|NP_126441.1| - 0.1 12.7 0.1 0.23 11.6 0.1 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain ApbA PF02558.16 gi|14520967|ref|NP_126442.1| - 1.9e-34 118.5 0.6 3.4e-34 117.7 0.6 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA ApbA_C PF08546.11 gi|14520967|ref|NP_126442.1| - 3.9e-29 101.4 0.1 5.6e-29 100.9 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal F420_oxidored PF03807.17 gi|14520967|ref|NP_126442.1| - 9.3e-06 26.1 0.2 1.9e-05 25.2 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|14520967|ref|NP_126442.1| - 0.002 17.7 0.6 0.0082 15.7 0.1 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|14520967|ref|NP_126442.1| - 0.0029 17.6 0.1 0.0054 16.7 0.1 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|14520967|ref|NP_126442.1| - 0.038 14.5 0.2 0.13 12.9 0.2 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|14520967|ref|NP_126442.1| - 0.053 13.4 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ProQ_C PF17516.2 gi|14520967|ref|NP_126442.1| - 0.093 12.2 0.0 0.21 11.1 0.0 1.6 1 0 0 1 1 1 0 ProQ C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|14520967|ref|NP_126442.1| - 0.1 12.9 0.2 0.79 10.0 0.1 2.4 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain CoA_binding_2 PF13380.6 gi|14520967|ref|NP_126442.1| - 0.1 13.1 0.1 0.49 10.9 0.1 1.9 1 1 0 2 2 2 0 CoA binding domain NAD_binding_8 PF13450.6 gi|14520967|ref|NP_126442.1| - 0.11 12.8 0.8 0.25 11.6 0.8 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain PhoU_div PF01865.16 gi|14520968|ref|NP_126443.1| - 1.6e-44 151.8 3.9 1.8e-44 151.6 3.9 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 Sod_Ni PF09055.11 gi|14520968|ref|NP_126443.1| - 0.012 16.2 0.0 0.22 12.1 0.0 2.2 1 1 1 2 2 2 0 Nickel-containing superoxide dismutase Arg_decarbox_C PF17944.1 gi|14520968|ref|NP_126443.1| - 0.023 15.2 0.3 0.21 12.2 0.0 2.7 2 1 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension Rnk_N PF14760.6 gi|14520968|ref|NP_126443.1| - 0.089 13.3 2.1 0.19 12.2 0.1 2.5 2 0 0 2 2 2 0 Rnk N-terminus zf-HC2 PF13490.6 gi|14520968|ref|NP_126443.1| - 0.28 11.4 2.8 1.6 9.1 0.0 3.2 3 0 0 3 3 3 0 Putative zinc-finger YtxH PF12732.7 gi|14520968|ref|NP_126443.1| - 3 8.4 6.6 59 4.3 0.8 3.6 3 1 0 3 3 3 0 YtxH-like protein 2-Hacid_dh_C PF02826.19 gi|14520969|ref|NP_126444.1| - 7.6e-73 243.7 0.1 2.3e-72 242.1 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|14520969|ref|NP_126444.1| - 1.7e-40 137.8 0.3 2e-40 137.6 0.3 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|14520969|ref|NP_126444.1| - 4e-06 27.1 0.1 3.7e-05 23.9 0.0 2.2 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|14520969|ref|NP_126444.1| - 2.4e-05 24.0 0.1 0.00037 20.1 0.0 2.6 3 0 0 3 3 3 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|14520969|ref|NP_126444.1| - 0.00038 19.8 0.0 0.001 18.4 0.0 1.7 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AdoHcyase_NAD PF00670.21 gi|14520969|ref|NP_126444.1| - 0.00099 19.2 0.0 0.003 17.7 0.0 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F420_oxidored PF03807.17 gi|14520969|ref|NP_126444.1| - 0.0032 18.0 0.3 0.82 10.3 0.0 2.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent XdhC_C PF13478.6 gi|14520969|ref|NP_126444.1| - 0.0043 17.6 0.0 0.014 15.9 0.0 1.9 2 1 0 2 2 2 1 XdhC Rossmann domain NmrA PF05368.13 gi|14520969|ref|NP_126444.1| - 0.015 14.8 0.3 0.038 13.5 0.2 1.8 1 1 1 2 2 2 0 NmrA-like family TrkA_N PF02254.18 gi|14520969|ref|NP_126444.1| - 0.083 13.2 1.9 2.3 8.5 0.0 3.3 2 1 1 3 3 3 0 TrkA-N domain Nitro_FeMo-Co PF02579.17 gi|14520969|ref|NP_126444.1| - 0.099 13.0 3.6 11 6.5 0.1 3.6 2 1 2 4 4 4 0 Dinitrogenase iron-molybdenum cofactor Glyco_hydro_57 PF03065.15 gi|14520970|ref|NP_126445.1| - 1.1e-77 261.4 6.5 5.2e-77 259.2 3.0 2.9 2 1 0 2 2 2 1 Glycosyl hydrolase family 57 DUF1957 PF09210.11 gi|14520970|ref|NP_126445.1| - 1.5e-31 108.8 4.6 1.5e-30 105.6 0.6 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF1957) HHH_5 PF14520.6 gi|14520970|ref|NP_126445.1| - 1.4e-05 25.6 0.1 4.9e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|14520970|ref|NP_126445.1| - 0.001 18.9 0.0 0.07 13.0 0.0 2.8 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH PF00633.23 gi|14520970|ref|NP_126445.1| - 0.073 13.0 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif PQQ PF01011.21 gi|14520970|ref|NP_126445.1| - 0.1 12.5 0.5 14 5.8 0.1 2.6 2 0 0 2 2 2 0 PQQ enzyme repeat UPF0051 PF01458.17 gi|14520971|ref|NP_126446.1| - 1e-57 195.4 0.0 1.3e-57 195.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.27 gi|14520972|ref|NP_126447.1| - 6.4e-24 85.0 0.0 8.6e-24 84.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14520972|ref|NP_126447.1| - 5.3e-12 46.2 2.2 3.6e-07 30.3 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520972|ref|NP_126447.1| - 1e-05 25.1 0.2 0.011 15.2 0.1 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|14520972|ref|NP_126447.1| - 0.00087 18.9 0.0 0.0025 17.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|14520972|ref|NP_126447.1| - 0.0011 18.6 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|14520972|ref|NP_126447.1| - 0.0048 16.5 0.0 0.008 15.8 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|14520972|ref|NP_126447.1| - 0.0058 17.2 0.1 0.016 15.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|14520972|ref|NP_126447.1| - 0.011 16.0 0.4 0.067 13.5 0.4 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|14520972|ref|NP_126447.1| - 0.016 15.2 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|14520972|ref|NP_126447.1| - 0.021 15.2 0.3 0.13 12.7 0.3 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 gi|14520972|ref|NP_126447.1| - 0.023 13.3 0.1 0.11 11.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|14520972|ref|NP_126447.1| - 0.069 12.6 0.0 0.24 10.8 0.1 1.8 1 1 1 2 2 2 0 PhoH-like protein AAA_24 PF13479.6 gi|14520972|ref|NP_126447.1| - 0.084 12.6 0.1 0.15 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|14520972|ref|NP_126447.1| - 0.17 10.6 0.0 0.25 10.1 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein AAA_28 PF13521.6 gi|14520972|ref|NP_126447.1| - 0.19 12.0 0.0 0.39 10.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|14520972|ref|NP_126447.1| - 0.19 11.9 0.1 0.3 11.2 0.1 1.4 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|14520972|ref|NP_126447.1| - 0.22 11.4 1.6 0.93 9.4 1.6 2.0 1 1 0 1 1 1 0 NACHT domain Nitro_FeMo-Co PF02579.17 gi|14520973|ref|NP_126448.1| - 6.3e-22 77.7 0.0 7.9e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor CBS PF00571.28 gi|14520973|ref|NP_126448.1| - 0.18 12.3 0.0 0.86 10.1 0.0 1.9 2 0 0 2 2 2 0 CBS domain Lactamase_B PF00753.27 gi|14520974|ref|NP_126449.1| - 2e-16 60.6 0.9 4.1e-16 59.6 0.9 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14520974|ref|NP_126449.1| - 3.2e-11 43.1 0.0 3.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|14520974|ref|NP_126449.1| - 0.0011 18.8 0.1 0.0052 16.7 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|14520974|ref|NP_126449.1| - 0.0023 17.4 0.0 0.0033 16.9 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|14520974|ref|NP_126449.1| - 0.14 12.1 0.0 0.37 10.8 0.0 1.8 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain eIF-5a PF01287.20 gi|14520975|ref|NP_126450.1| - 9.6e-13 48.0 1.0 1.5e-12 47.4 1.0 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|14520975|ref|NP_126450.1| - 6.8e-05 22.8 0.1 0.00019 21.4 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|14520975|ref|NP_126450.1| - 0.0011 19.0 0.2 0.002 18.1 0.2 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain DNA_pol_B_3 PF08408.10 gi|14520975|ref|NP_126450.1| - 0.06 13.6 0.1 0.11 12.7 0.1 1.6 1 1 0 1 1 1 0 DNA polymerase family B viral insert Herpes_UL32 PF06070.11 gi|14520975|ref|NP_126450.1| - 0.085 10.6 0.0 0.099 10.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 DUF1240 PF06836.12 gi|14520976|ref|NP_126451.1| - 0.85 10.2 5.4 1.6 9.3 0.9 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1240) EMG1 PF03587.14 gi|14520977|ref|NP_126452.1| - 6.4e-50 169.5 0.0 7.3e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase MazE_antitoxin PF04014.18 gi|14520978|ref|NP_126453.1| - 4e-14 52.2 0.3 5.9e-14 51.6 0.3 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|14520978|ref|NP_126453.1| - 4.1e-05 23.9 0.1 4.4e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin Skp1 PF01466.19 gi|14520978|ref|NP_126453.1| - 0.06 13.5 0.4 6.7 6.9 0.0 2.2 1 1 1 2 2 2 0 Skp1 family, dimerisation domain PIN PF01850.21 gi|14520979|ref|NP_126454.1| - 1.6e-15 57.7 0.8 1.8e-15 57.5 0.8 1.0 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 gi|14520979|ref|NP_126454.1| - 0.00045 20.5 0.0 0.88 9.9 0.0 2.1 2 0 0 2 2 2 2 PIN like domain ParD_antitoxin PF03693.14 gi|14520979|ref|NP_126454.1| - 0.15 12.5 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH PIN_4 PF13638.6 gi|14520979|ref|NP_126454.1| - 0.16 12.2 0.3 0.6 10.4 0.3 1.9 1 1 0 1 1 1 0 PIN domain Rib_5-P_isom_A PF06026.14 gi|14520981|ref|NP_126456.1| - 3.6e-65 218.8 0.3 4.4e-65 218.5 0.3 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|14520981|ref|NP_126456.1| - 6.6e-07 29.4 0.2 0.0001 22.3 0.1 2.2 1 1 0 2 2 2 2 DeoR C terminal sensor domain Methyltr_RsmB-F PF01189.17 gi|14520982|ref|NP_126457.1| - 3.5e-59 199.8 0.0 4.4e-59 199.5 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|14520982|ref|NP_126457.1| - 7.7e-21 74.4 0.0 1.4e-20 73.6 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|14520982|ref|NP_126457.1| - 5.8e-09 35.9 0.0 8.4e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|14520982|ref|NP_126457.1| - 5.4e-07 29.9 0.0 1.2e-06 28.8 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase Ubie_methyltran PF01209.18 gi|14520982|ref|NP_126457.1| - 0.001 18.5 0.0 0.02 14.3 0.0 2.1 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family DUF2431 PF10354.9 gi|14520982|ref|NP_126457.1| - 0.0012 19.2 0.0 0.0017 18.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Methyltransf_25 PF13649.6 gi|14520982|ref|NP_126457.1| - 0.0032 18.1 0.0 0.059 14.1 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain rRNA_methylase PF06962.12 gi|14520982|ref|NP_126457.1| - 0.057 13.4 0.0 6.1 6.8 0.0 2.3 2 0 0 2 2 2 0 Putative rRNA methylase POR PF01558.18 gi|14520982|ref|NP_126457.1| - 0.1 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase ScsC_N PF18312.1 gi|33356717|ref|NP_126458.2| - 0.012 15.4 0.7 0.94 9.3 0.4 2.7 2 0 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain PocR PF10114.9 gi|33356717|ref|NP_126458.2| - 0.039 13.7 1.3 0.074 12.8 0.7 1.8 2 0 0 2 2 2 0 Sensory domain found in PocR PBP_dimer PF03717.15 gi|33356717|ref|NP_126458.2| - 0.16 12.3 1.4 0.23 11.8 1.4 1.2 1 0 0 1 1 1 0 Penicillin-binding Protein dimerisation domain AMH_N PF04709.12 gi|33356717|ref|NP_126458.2| - 0.18 10.7 0.2 0.23 10.3 0.2 1.1 1 0 0 1 1 1 0 Anti-Mullerian hormone, N terminal region KIP1 PF07765.12 gi|33356717|ref|NP_126458.2| - 0.77 9.9 3.1 0.37 11.0 0.8 1.7 2 0 0 2 2 2 0 KIP1-like protein SNF PF00209.18 gi|14520984|ref|NP_126459.1| - 8e-39 133.7 34.5 7.6e-21 74.4 17.2 2.3 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family Aminotran_1_2 PF00155.21 gi|14520985|ref|NP_126460.1| - 1.2e-79 268.1 0.0 1.4e-79 267.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|14520985|ref|NP_126460.1| - 4.5e-10 39.4 0.0 6.7e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|14520985|ref|NP_126460.1| - 7.3e-06 25.2 0.0 2.3e-05 23.5 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|14520985|ref|NP_126460.1| - 0.00024 19.8 0.0 0.00036 19.2 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Rsbr_N PF08678.10 gi|14520985|ref|NP_126460.1| - 0.0049 16.9 0.0 0.27 11.3 0.1 2.5 2 0 0 2 2 2 1 Rsbr N terminal Beta_elim_lyase PF01212.21 gi|14520985|ref|NP_126460.1| - 0.026 13.8 0.0 0.039 13.2 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase ABC2_membrane_2 PF12679.7 gi|14520986|ref|NP_126461.1| - 2e-50 171.7 15.3 2.2e-50 171.6 15.3 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|14520986|ref|NP_126461.1| - 4.5e-10 39.8 20.5 1.4e-09 38.1 19.8 2.1 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|14520986|ref|NP_126461.1| - 4.6e-08 32.7 34.3 8.9e-08 31.8 31.0 2.6 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14520986|ref|NP_126461.1| - 7.7e-07 28.5 27.8 7.7e-07 28.5 27.8 2.9 2 1 1 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|14520986|ref|NP_126461.1| - 0.00062 19.4 20.4 0.00062 19.4 20.4 2.7 1 1 1 2 2 2 1 ABC-2 family transporter protein DUF3328 PF11807.8 gi|14520986|ref|NP_126461.1| - 0.21 11.3 0.3 2.1 8.1 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3328) PHO4 PF01384.20 gi|14520986|ref|NP_126461.1| - 0.27 10.2 3.2 0.43 9.6 3.2 1.4 1 0 0 1 1 1 0 Phosphate transporter family NPCBM_assoc PF10633.9 gi|14520987|ref|NP_126462.1| - 1.5e-27 95.6 0.0 1.2e-14 54.3 0.1 5.6 4 1 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CarboxypepD_reg PF13620.6 gi|14520987|ref|NP_126462.1| - 1.1e-11 44.8 0.2 7.3e-09 35.8 0.0 4.7 5 0 0 5 5 4 1 Carboxypeptidase regulatory-like domain FixG_C PF11614.8 gi|14520987|ref|NP_126462.1| - 2.3e-09 37.5 4.5 0.077 13.2 0.0 5.6 4 1 2 6 6 6 3 IG-like fold at C-terminal of FixG, putative oxidoreductase CarbopepD_reg_2 PF13715.6 gi|14520987|ref|NP_126462.1| - 8.9e-08 32.0 3.2 2.7e-06 27.3 0.2 3.9 2 1 1 3 3 3 1 CarboxypepD_reg-like domain MG2 PF01835.19 gi|14520987|ref|NP_126462.1| - 3.3e-07 30.7 0.0 1.3 9.5 0.0 5.6 5 1 0 6 6 6 1 MG2 domain PEGA PF08308.11 gi|14520987|ref|NP_126462.1| - 5.5e-07 29.4 3.5 4.5e-06 26.5 0.3 4.2 4 1 1 5 5 5 1 PEGA domain CARDB PF07705.11 gi|14520987|ref|NP_126462.1| - 7.2e-07 29.4 2.6 0.075 13.3 0.0 4.5 3 2 0 3 3 3 2 CARDB DUF4625 PF15418.6 gi|14520987|ref|NP_126462.1| - 3e-05 24.3 0.2 6 7.1 0.0 4.5 5 0 0 5 5 5 1 Domain of unknown function (DUF4625) DUF3324 PF11797.8 gi|14520987|ref|NP_126462.1| - 0.0001 22.3 0.4 0.04 13.9 0.0 4.2 5 0 0 5 5 5 1 Protein of unknown function C-terminal (DUF3324) DUF4832 PF16116.5 gi|14520987|ref|NP_126462.1| - 0.0098 15.8 0.6 9 6.1 0.0 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4832) Fucosidase_C PF16757.5 gi|14520987|ref|NP_126462.1| - 0.013 16.0 0.0 0.06 13.9 0.0 2.2 1 0 0 1 1 1 0 Alpha-L-fucosidase C-terminal domain Alpha_adaptinC2 PF02883.20 gi|14520987|ref|NP_126462.1| - 0.018 15.3 0.0 0.16 12.3 0.0 2.5 2 0 0 2 2 2 0 Adaptin C-terminal domain Fn3-like PF14310.6 gi|14520987|ref|NP_126462.1| - 0.021 14.9 0.2 25 5.1 0.0 4.0 3 0 0 3 3 2 0 Fibronectin type III-like domain MG4 PF17789.1 gi|14520987|ref|NP_126462.1| - 0.062 13.5 0.1 1.9 8.7 0.0 3.2 3 0 0 3 3 2 0 Macroglobulin domain MG4 DUF824 PF05688.11 gi|14520987|ref|NP_126462.1| - 0.079 12.8 0.0 2.8 7.8 0.0 3.2 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) fn3_3 PF14686.6 gi|14520987|ref|NP_126462.1| - 0.087 12.6 2.1 3.1 7.7 0.0 4.0 5 0 0 5 5 5 0 Polysaccharide lyase family 4, domain II Transglut_N PF00868.20 gi|14520987|ref|NP_126462.1| - 0.095 13.1 0.0 17 5.8 0.0 3.7 4 0 0 4 4 4 0 Transglutaminase family DUF11 PF01345.18 gi|14520987|ref|NP_126462.1| - 0.15 12.4 0.1 16 5.9 0.0 3.4 3 1 0 3 3 3 0 Domain of unknown function DUF11 Y_Y_Y PF07495.13 gi|14520987|ref|NP_126462.1| - 0.35 10.9 2.5 8 6.5 0.0 4.1 4 1 0 4 4 4 0 Y_Y_Y domain DUF3869 PF12985.7 gi|14520987|ref|NP_126462.1| - 0.48 10.8 1.9 4.3 7.8 0.1 3.4 2 1 0 3 3 3 0 Domain of unknown function (DUF3869) Mfa_like_1 PF13149.6 gi|14520987|ref|NP_126462.1| - 7.1 6.6 12.9 0.078 13.0 0.7 3.3 3 2 1 4 4 4 0 Fimbrillin-like ABC_tran PF00005.27 gi|14520988|ref|NP_126463.1| - 3.6e-30 105.3 0.0 6.6e-30 104.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|14520988|ref|NP_126463.1| - 7.2e-10 39.5 1.9 1.4e-09 38.5 1.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|14520988|ref|NP_126463.1| - 2.4e-09 37.4 6.0 1.7e-07 31.4 0.1 2.6 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14520988|ref|NP_126463.1| - 0.0062 16.0 0.3 2.1 7.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MukB PF04310.12 gi|14520988|ref|NP_126463.1| - 0.0076 16.1 0.6 0.056 13.2 0.0 2.1 2 0 0 2 2 2 1 MukB N-terminal SRP54 PF00448.22 gi|14520988|ref|NP_126463.1| - 0.018 14.7 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 gi|14520988|ref|NP_126463.1| - 0.077 12.7 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain HEM4 PF02602.15 gi|14520988|ref|NP_126463.1| - 0.15 11.4 0.0 0.3 10.4 0.0 1.5 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD AAA_22 PF13401.6 gi|14520988|ref|NP_126463.1| - 0.17 12.1 0.6 13 6.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14520988|ref|NP_126463.1| - 0.27 11.7 10.6 2.1 8.8 10.6 2.4 1 1 0 1 1 1 0 AAA domain ABC2_membrane_2 PF12679.7 gi|14520989|ref|NP_126464.1| - 1.1e-35 123.3 24.7 1.9e-34 119.3 24.7 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|14520989|ref|NP_126464.1| - 5.1e-08 33.1 20.6 5.1e-08 33.1 20.6 2.4 2 1 2 4 4 4 2 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|14520989|ref|NP_126464.1| - 3.3e-06 26.7 25.4 3.3e-06 26.7 25.4 2.0 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14520989|ref|NP_126464.1| - 0.022 13.9 38.6 0.16 11.1 38.6 2.4 1 1 0 1 1 1 0 ABC-2 family transporter protein STATa_Ig PF18214.1 gi|14520989|ref|NP_126464.1| - 0.024 14.6 0.0 0.041 13.9 0.0 1.4 1 0 0 1 1 1 0 STATa Immunoglobulin-like domain ABC2_membrane_5 PF13346.6 gi|14520989|ref|NP_126464.1| - 4.2 6.9 34.0 4.3 6.8 27.5 3.1 2 1 0 2 2 2 0 ABC-2 family transporter protein DAO PF01266.24 gi|14520990|ref|NP_126465.1| - 1.6e-76 258.2 0.0 1.8e-76 258.1 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|14520990|ref|NP_126465.1| - 7.9e-09 35.1 0.6 7.3e-08 31.9 0.6 2.0 1 1 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|14520990|ref|NP_126465.1| - 3.8e-07 30.2 0.2 9.8e-07 28.9 0.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|14520990|ref|NP_126465.1| - 1.1e-05 24.8 0.8 1.9e-05 24.1 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|14520990|ref|NP_126465.1| - 2e-05 24.0 0.3 0.00083 18.7 0.1 2.2 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.27 gi|14520990|ref|NP_126465.1| - 2.1e-05 25.0 2.2 2.2e-05 24.9 0.6 2.0 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|14520990|ref|NP_126465.1| - 2.6e-05 23.6 1.4 7.7e-05 22.1 1.4 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|14520990|ref|NP_126465.1| - 0.0001 21.7 0.1 0.0026 17.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|14520990|ref|NP_126465.1| - 0.0012 17.6 0.0 0.011 14.4 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|14520990|ref|NP_126465.1| - 0.0015 17.8 0.3 0.0099 15.2 0.1 2.0 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|14520990|ref|NP_126465.1| - 0.0024 17.3 3.3 0.042 13.2 3.3 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|14520990|ref|NP_126465.1| - 0.0032 17.4 1.5 0.0056 16.6 1.5 1.6 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|14520990|ref|NP_126465.1| - 0.0042 17.5 0.4 0.0099 16.3 0.3 1.5 1 1 0 1 1 1 1 Putative NAD(P)-binding Lycopene_cycl PF05834.12 gi|14520990|ref|NP_126465.1| - 0.01 14.9 0.6 0.017 14.2 0.6 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein ApbA PF02558.16 gi|14520990|ref|NP_126465.1| - 0.022 14.4 0.1 0.038 13.6 0.1 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 gi|14520990|ref|NP_126465.1| - 0.03 14.6 0.9 0.061 13.6 0.9 1.5 1 0 0 1 1 1 0 TrkA-N domain GIDA PF01134.22 gi|14520990|ref|NP_126465.1| - 0.04 13.0 6.6 0.064 12.3 1.6 2.5 2 1 1 3 3 3 0 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|14520990|ref|NP_126465.1| - 0.043 12.7 3.2 0.24 10.2 3.2 2.1 1 1 0 1 1 1 0 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|14520990|ref|NP_126465.1| - 0.076 13.0 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 FAD-NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|14520990|ref|NP_126465.1| - 0.66 10.2 2.1 1.6 9.0 1.5 1.9 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox_2 PF07992.14 gi|14520991|ref|NP_126466.1| - 3.5e-24 85.6 0.5 1e-13 51.2 0.1 2.2 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Fer2_4 PF13510.6 gi|14520991|ref|NP_126466.1| - 8e-14 51.5 0.0 1.8e-13 50.3 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain SO_alpha_A3 PF17806.1 gi|14520991|ref|NP_126466.1| - 7.8e-10 39.0 0.0 2.8e-09 37.2 0.0 1.8 2 0 0 2 2 2 1 Sarcosine oxidase A3 domain FAD_oxidored PF12831.7 gi|14520991|ref|NP_126466.1| - 7.8e-07 28.8 0.1 1.2e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|14520991|ref|NP_126466.1| - 5.2e-06 25.9 0.8 1.4e-05 24.4 0.7 1.8 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.6 gi|14520991|ref|NP_126466.1| - 0.00024 20.5 1.1 0.06 12.6 0.3 3.0 1 1 2 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|14520991|ref|NP_126466.1| - 0.0017 18.0 3.5 0.044 13.4 1.1 2.6 1 1 1 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|14520991|ref|NP_126466.1| - 0.0052 15.5 2.2 0.036 12.8 0.3 2.6 2 1 1 3 3 3 1 HI0933-like protein NAD_binding_9 PF13454.6 gi|14520991|ref|NP_126466.1| - 0.01 15.8 0.5 1.9 8.5 0.1 3.1 2 1 1 3 3 3 0 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 gi|14520991|ref|NP_126466.1| - 0.025 13.7 3.1 0.16 11.0 1.2 2.7 2 1 1 3 3 3 0 FAD binding domain FAD_binding_3 PF01494.19 gi|14520991|ref|NP_126466.1| - 0.064 12.5 0.5 0.13 11.5 0.5 1.4 1 0 0 1 1 1 0 FAD binding domain NAD_binding_8 PF13450.6 gi|14520991|ref|NP_126466.1| - 0.11 12.7 0.0 0.34 11.2 0.0 1.9 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|14520991|ref|NP_126466.1| - 0.27 10.3 1.9 2 7.4 0.6 2.5 2 1 1 3 3 3 0 Glucose inhibited division protein A SSF PF00474.17 gi|14520992|ref|NP_126467.1| - 5.3e-82 275.8 27.9 7e-82 275.4 27.9 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Bac_export_2 PF01312.19 gi|14520992|ref|NP_126467.1| - 5 6.2 15.9 2.1 7.5 4.2 2.4 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family Molybdopterin PF00384.22 gi|14520995|ref|NP_126470.1| - 4.1e-50 171.0 0.0 4.4e-49 167.6 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|14520995|ref|NP_126470.1| - 1.1e-22 80.2 0.0 2.2e-22 79.2 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|14520995|ref|NP_126470.1| - 1.4e-06 28.2 0.0 3e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain MORN_2 PF07661.13 gi|14520995|ref|NP_126470.1| - 0.0043 17.1 0.6 9 6.9 0.0 3.6 3 0 0 3 3 3 2 MORN repeat variant DUF1279 PF06916.13 gi|14520995|ref|NP_126470.1| - 0.34 11.5 1.3 22 5.7 0.2 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF1279) UPRTase PF14681.6 gi|14520996|ref|NP_126471.1| - 5.9e-50 169.6 0.0 6.9e-50 169.4 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|14520996|ref|NP_126471.1| - 9.9e-08 31.7 0.8 1.4e-07 31.2 0.8 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain AAA_lid_8 PF17868.1 gi|14520996|ref|NP_126471.1| - 0.17 11.8 0.5 0.8 9.6 0.0 2.3 3 0 0 3 3 3 0 AAA lid domain Xan_ur_permease PF00860.20 gi|14520997|ref|NP_126472.1| - 4.5e-99 331.8 37.3 5.3e-99 331.5 37.3 1.1 1 0 0 1 1 1 1 Permease family bPH_5 PF10882.8 gi|14520998|ref|NP_126473.1| - 0.032 14.3 0.0 0.15 12.2 0.0 1.9 1 1 0 1 1 1 0 Bacterial PH domain Thi4 PF01946.17 gi|14520999|ref|NP_126474.1| - 2.2e-84 282.4 1.5 2.5e-84 282.2 1.5 1.0 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 gi|14520999|ref|NP_126474.1| - 7.6e-13 48.6 1.9 1e-12 48.2 1.9 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|14520999|ref|NP_126474.1| - 6.5e-11 42.4 6.6 1.7e-05 24.6 2.9 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|14520999|ref|NP_126474.1| - 7.1e-10 38.5 7.3 3.3e-06 26.4 1.3 2.9 2 1 2 4 4 4 2 FAD binding domain NAD_binding_8 PF13450.6 gi|14520999|ref|NP_126474.1| - 3.5e-09 36.8 1.2 8.2e-09 35.6 1.2 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|14520999|ref|NP_126474.1| - 8.8e-08 31.7 0.4 1.1e-07 31.4 0.4 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|14520999|ref|NP_126474.1| - 2.9e-07 29.6 3.6 4.1e-07 29.1 2.9 1.6 1 1 1 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|14520999|ref|NP_126474.1| - 2.1e-06 27.2 0.2 1.9e-05 24.1 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|14520999|ref|NP_126474.1| - 0.00043 19.5 4.4 0.0012 18.0 4.4 1.8 1 1 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|14520999|ref|NP_126474.1| - 0.0038 17.8 4.6 0.01 16.4 0.6 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|14520999|ref|NP_126474.1| - 0.0077 15.6 0.3 0.023 14.0 0.1 1.7 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_3 PF13738.6 gi|14520999|ref|NP_126474.1| - 0.0083 15.4 2.1 0.02 14.2 0.3 2.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|14520999|ref|NP_126474.1| - 0.0084 16.1 2.0 0.03 14.3 1.4 2.2 2 0 0 2 2 2 1 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|14520999|ref|NP_126474.1| - 0.078 11.8 1.3 0.35 9.7 0.5 2.0 2 0 0 2 2 2 0 Tryptophan halogenase DUF3990 PF13151.6 gi|14520999|ref|NP_126474.1| - 0.095 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3990) Lycopene_cycl PF05834.12 gi|14520999|ref|NP_126474.1| - 0.67 8.9 2.5 1.3 7.9 0.3 2.3 2 1 0 3 3 3 0 Lycopene cyclase protein SOR_SNZ PF01680.17 gi|14521000|ref|NP_126475.1| - 1.2e-99 332.3 7.5 8.2e-97 323.0 5.4 2.4 2 1 1 3 3 3 2 SOR/SNZ family ThiG PF05690.14 gi|14521000|ref|NP_126475.1| - 6e-10 38.8 7.7 6.2e-08 32.2 0.3 2.4 3 0 0 3 3 3 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|14521000|ref|NP_126475.1| - 0.00093 18.4 1.1 0.41 9.7 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|14521000|ref|NP_126475.1| - 0.0044 16.4 3.6 0.18 11.2 0.0 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase NanE PF04131.14 gi|14521000|ref|NP_126475.1| - 0.014 14.6 3.2 0.16 11.2 0.0 2.9 2 2 1 3 3 3 0 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 gi|14521000|ref|NP_126475.1| - 0.019 14.1 0.1 0.77 8.9 0.0 2.3 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase FMN_dh PF01070.18 gi|14521000|ref|NP_126475.1| - 0.048 12.7 0.8 0.74 8.8 0.0 2.3 2 1 0 2 2 2 0 FMN-dependent dehydrogenase Ribosomal_S5_C PF03719.15 gi|14521000|ref|NP_126475.1| - 0.09 12.2 0.1 0.32 10.5 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein S5, C-terminal domain DUF442 PF04273.13 gi|14521000|ref|NP_126475.1| - 0.11 12.6 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Putative phosphatase (DUF442) SNO PF01174.19 gi|14521001|ref|NP_126476.1| - 5.6e-58 195.9 0.0 6.3e-58 195.7 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|14521001|ref|NP_126476.1| - 4.8e-11 42.6 0.0 6.3e-11 42.2 0.0 1.3 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|14521001|ref|NP_126476.1| - 2.1e-07 30.8 0.0 2.9e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S51 GATase PF00117.28 gi|14521001|ref|NP_126476.1| - 2.8e-07 30.5 0.0 4e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|14521001|ref|NP_126476.1| - 0.0012 18.7 0.0 0.0018 18.1 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family AAA_15 PF13175.6 gi|14521002|ref|NP_126477.1| - 3.5e-16 59.9 12.9 9.6e-08 32.1 8.2 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|14521002|ref|NP_126477.1| - 1.2e-14 54.8 4.6 6.6e-13 49.1 4.6 2.2 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|14521002|ref|NP_126477.1| - 0.00082 19.9 0.4 0.0014 19.2 0.4 1.5 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14521002|ref|NP_126477.1| - 0.00083 18.8 0.4 0.0026 17.2 0.3 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 gi|14521002|ref|NP_126477.1| - 0.0045 16.3 1.1 0.0082 15.4 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) DUF2705 PF10920.8 gi|14521002|ref|NP_126477.1| - 0.091 12.1 0.3 0.14 11.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2705) PTPlike_phytase PF14566.6 gi|14521002|ref|NP_126477.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate MMR_HSR1 PF01926.23 gi|14521002|ref|NP_126477.1| - 0.14 12.2 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Molybdopterin PF00384.22 gi|14521004|ref|NP_126479.1| - 4.5e-95 319.2 0.0 5.3e-95 318.9 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|14521004|ref|NP_126479.1| - 3.1e-24 85.1 0.0 5.4e-24 84.4 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|14521004|ref|NP_126479.1| - 2.9e-09 36.8 0.1 5.7e-09 35.8 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Rho_RNA_bind PF07497.12 gi|14521004|ref|NP_126479.1| - 0.0091 15.8 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 Rho termination factor, RNA-binding domain CDC48_N PF02359.18 gi|14521004|ref|NP_126479.1| - 0.065 13.4 0.1 0.2 11.9 0.1 1.8 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain SIS PF01380.22 gi|14521004|ref|NP_126479.1| - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 SIS domain BPD_transp_1 PF00528.22 gi|14521005|ref|NP_126480.1| - 6.7e-24 84.6 40.5 2.8e-14 53.3 18.3 3.9 3 1 1 4 4 4 2 Binding-protein-dependent transport system inner membrane component DUF565 PF04483.12 gi|14521005|ref|NP_126480.1| - 0.065 13.8 1.2 0.29 11.7 1.2 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF565) ABC_tran PF00005.27 gi|14521006|ref|NP_126481.1| - 1.3e-36 126.1 0.0 2.4e-36 125.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521006|ref|NP_126481.1| - 1.4e-08 34.9 0.1 0.0042 16.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 gi|14521006|ref|NP_126481.1| - 6.3e-05 23.0 0.1 0.0032 17.4 0.0 2.3 2 0 0 2 2 2 1 Rad17 P-loop domain SMC_N PF02463.19 gi|14521006|ref|NP_126481.1| - 0.007 15.8 0.1 0.33 10.3 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|14521006|ref|NP_126481.1| - 0.013 15.9 0.0 0.018 15.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|14521006|ref|NP_126481.1| - 0.02 15.2 0.6 0.09 13.1 0.6 2.0 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|14521006|ref|NP_126481.1| - 0.033 14.6 0.9 0.17 12.3 0.9 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|14521006|ref|NP_126481.1| - 0.04 14.4 0.2 0.12 12.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|14521006|ref|NP_126481.1| - 0.11 12.7 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|14521006|ref|NP_126481.1| - 0.12 12.7 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase PRK PF00485.18 gi|14521006|ref|NP_126481.1| - 0.14 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family SBP_bac_6 PF13343.6 gi|14521007|ref|NP_126482.1| - 2.1e-34 119.0 3.5 2.8e-34 118.6 3.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|14521007|ref|NP_126482.1| - 3.9e-32 112.2 2.9 5.1e-32 111.8 2.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|14521007|ref|NP_126482.1| - 4.6e-24 85.4 0.0 6.6e-24 84.9 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|14521007|ref|NP_126482.1| - 7.9e-23 81.9 6.9 1.3e-22 81.1 6.9 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF1297 PF06973.12 gi|14521009|ref|NP_126484.1| - 1.1e-74 250.1 0.0 1.3e-74 249.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|14521009|ref|NP_126484.1| - 2.4e-34 118.0 0.0 4.6e-34 117.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|14521009|ref|NP_126484.1| - 0.035 13.6 0.0 0.065 12.7 0.0 1.4 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|14521009|ref|NP_126484.1| - 0.037 14.1 0.0 0.1 12.7 0.0 1.7 2 0 0 2 2 2 0 ATP-grasp domain DUF448 PF04296.13 gi|14521009|ref|NP_126484.1| - 0.12 12.3 0.0 0.28 11.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF448) GMP_synt_C PF00958.22 gi|14521010|ref|NP_126485.1| - 1.3e-34 118.1 0.0 2.7e-34 117.1 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|14521010|ref|NP_126485.1| - 3.2e-14 52.7 0.1 3e-07 29.8 0.0 2.2 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|14521010|ref|NP_126485.1| - 7.5e-05 22.3 0.0 0.0042 16.6 0.0 2.2 1 1 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|14521010|ref|NP_126485.1| - 0.00013 21.6 0.0 0.00026 20.6 0.0 1.4 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|14521010|ref|NP_126485.1| - 0.00028 19.8 0.1 0.016 14.0 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|14521010|ref|NP_126485.1| - 0.006 16.4 0.0 0.01 15.6 0.0 1.4 1 0 0 1 1 1 1 PP-loop family Asn_synthase PF00733.21 gi|14521010|ref|NP_126485.1| - 0.01 15.5 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase PAPS_reduct PF01507.19 gi|14521010|ref|NP_126485.1| - 0.01 15.9 0.0 0.017 15.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family DUF3094 PF11293.8 gi|14521010|ref|NP_126485.1| - 0.13 11.9 0.1 0.61 9.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3094) GATase PF00117.28 gi|14521011|ref|NP_126486.1| - 4.3e-46 157.1 0.0 5.2e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|14521011|ref|NP_126486.1| - 9.9e-15 54.9 0.2 2.3e-13 50.4 0.1 2.6 1 1 1 2 2 2 1 Peptidase C26 DUF5012 PF16404.5 gi|14521011|ref|NP_126486.1| - 0.022 14.9 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5012) GST_N_2 PF13409.6 gi|14521011|ref|NP_126486.1| - 0.089 13.1 0.0 0.96 9.8 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain SLAC1 PF03595.17 gi|14521012|ref|NP_126487.1| - 4.4e-68 229.9 44.5 5e-68 229.8 44.5 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel PIN PF01850.21 gi|14521013|ref|NP_126488.1| - 3.8e-18 66.2 0.4 5e-18 65.8 0.4 1.2 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|14521013|ref|NP_126488.1| - 0.013 16.2 0.4 0.13 13.1 0.4 2.1 1 1 0 1 1 1 0 PIN domain DUF2101 PF09874.9 gi|14521014|ref|NP_126489.1| - 6.9e-100 332.9 9.6 8e-100 332.7 9.6 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2101) FA_desaturase PF00487.24 gi|14521014|ref|NP_126489.1| - 0.28 11.0 3.2 0.36 10.6 3.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2341 PF10102.9 gi|14521015|ref|NP_126490.1| - 2.5e-20 72.8 0.9 7.3e-20 71.4 0.9 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) DUF3244 PF11589.8 gi|14521017|ref|NP_126492.1| - 0.0076 16.3 0.2 0.18 11.9 0.0 3.0 3 1 0 3 3 3 1 Domain of unknown function (DUF3244) Tail_tube PF10618.9 gi|14521017|ref|NP_126492.1| - 0.089 12.7 0.1 0.45 10.4 0.1 2.0 2 0 0 2 2 2 0 Phage tail tube protein Class_IIIsignal PF04021.12 gi|14521018|ref|NP_126493.1| - 0.011 15.7 0.5 0.019 14.9 0.5 1.4 1 0 0 1 1 1 0 Class III signal peptide Class_IIIsignal PF04021.12 gi|14521020|ref|NP_126495.1| - 5.6e-06 26.2 0.3 1.1e-05 25.3 0.3 1.5 1 0 0 1 1 1 1 Class III signal peptide Glyco_hydro_59M PF17387.2 gi|14521020|ref|NP_126495.1| - 0.019 15.1 0.0 0.053 13.7 0.0 1.7 2 0 0 2 2 2 0 Glycosyl hydrolase family 59 central domain DUF3341 PF11821.8 gi|14521021|ref|NP_126496.1| - 0.037 13.7 0.0 0.056 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) Tubulin PF00091.25 gi|14521022|ref|NP_126497.1| - 3.8e-28 99.0 2.1 4.1e-26 92.4 2.1 2.2 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain RPN6_C_helix PF18503.1 gi|14521022|ref|NP_126497.1| - 0.072 12.8 0.1 0.15 11.8 0.1 1.6 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain Prenyltrans PF00432.21 gi|14521023|ref|NP_126498.1| - 5.2e-12 45.3 5.8 2.9e-05 23.7 0.0 4.6 4 0 0 4 4 4 3 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 gi|14521023|ref|NP_126498.1| - 2e-08 33.7 0.4 0.0011 18.2 0.0 3.4 3 1 1 4 4 4 2 Squalene-hopene cyclase N-terminal domain SQHop_cyclase_C PF13243.6 gi|14521023|ref|NP_126498.1| - 4.1e-06 26.1 0.2 0.13 11.4 0.0 3.3 3 0 0 3 3 3 3 Squalene-hopene cyclase C-terminal domain TRAP_beta PF05753.14 gi|14521024|ref|NP_126499.1| - 0.00016 21.1 0.0 0.00053 19.4 0.0 1.8 1 0 0 1 1 1 1 Translocon-associated protein beta (TRAPB) DUF11 PF01345.18 gi|14521024|ref|NP_126499.1| - 0.0059 16.9 0.0 0.02 15.2 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function DUF11 Alpha_kinase PF02816.18 gi|14521024|ref|NP_126499.1| - 0.14 12.3 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Alpha-kinase family DEAD PF00270.29 gi|14521025|ref|NP_126500.1| - 1.6e-31 109.5 0.0 1.2e-28 100.0 0.0 2.6 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|14521025|ref|NP_126500.1| - 7.7e-22 77.7 0.3 2.4e-19 69.7 0.0 3.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD_assoc PF08494.11 gi|14521025|ref|NP_126500.1| - 5e-14 52.5 0.0 7e-13 48.8 0.0 2.5 1 1 0 1 1 1 1 DEAD/H associated ResIII PF04851.15 gi|14521025|ref|NP_126500.1| - 1.6e-08 34.7 0.0 2.5e-07 30.9 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|14521025|ref|NP_126500.1| - 0.0001 22.7 0.0 0.002 18.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain HypA PF01155.19 gi|14521025|ref|NP_126500.1| - 0.0042 17.1 0.1 0.01 15.9 0.1 1.7 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|14521025|ref|NP_126500.1| - 0.042 14.0 0.1 0.085 13.0 0.1 1.5 1 0 0 1 1 1 0 Zinc ribbon domain DUF4379 PF14311.6 gi|14521025|ref|NP_126500.1| - 0.048 14.0 1.1 0.11 12.8 1.1 1.6 1 0 0 1 1 1 0 Probable Zinc-ribbon domain AAA_11 PF13086.6 gi|14521025|ref|NP_126500.1| - 0.096 12.5 0.0 0.25 11.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|14521025|ref|NP_126500.1| - 0.11 12.3 0.0 0.57 9.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain zf-ribbon_3 PF13248.6 gi|14521025|ref|NP_126500.1| - 0.12 11.8 0.7 3.9 7.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Hjc PF01870.18 gi|14521026|ref|NP_126501.1| - 7.3e-30 102.8 0.3 8.8e-30 102.6 0.3 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) HicA_toxin PF07927.12 gi|14521026|ref|NP_126501.1| - 0.0027 17.7 0.1 0.0056 16.7 0.1 1.5 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, UPF0102 PF02021.17 gi|14521026|ref|NP_126501.1| - 0.017 15.3 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 DAHP_snth_FXD PF18152.1 gi|14521026|ref|NP_126501.1| - 0.057 13.3 0.0 3.1 7.7 0.0 2.3 2 0 0 2 2 2 0 DAHP synthase ferredoxin-like domain PDDEXK_4 PF14281.6 gi|14521026|ref|NP_126501.1| - 0.15 12.2 0.0 0.17 12.0 0.0 1.2 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily CarboxypepD_reg PF13620.6 gi|14521027|ref|NP_126502.1| - 9.9e-08 32.1 0.6 0.078 13.3 0.0 4.3 3 2 1 4 4 4 2 Carboxypeptidase regulatory-like domain CARDB PF07705.11 gi|14521027|ref|NP_126502.1| - 2.1e-07 31.1 0.9 1.8e-06 28.2 0.2 2.9 3 1 0 3 3 3 1 CARDB Big_1 PF02369.16 gi|14521027|ref|NP_126502.1| - 1e-06 28.6 2.8 0.00047 20.1 0.0 4.4 3 1 0 3 3 3 1 Bacterial Ig-like domain (group 1) MG4 PF17789.1 gi|14521027|ref|NP_126502.1| - 4.6e-06 26.7 0.3 0.0034 17.5 0.0 3.6 3 0 0 3 3 3 1 Macroglobulin domain MG4 DUF4198 PF10670.9 gi|14521027|ref|NP_126502.1| - 0.00011 22.7 1.4 0.0058 17.0 0.1 3.3 2 1 1 3 3 3 1 Domain of unknown function (DUF4198) DUF11 PF01345.18 gi|14521027|ref|NP_126502.1| - 0.00021 21.5 0.7 0.0026 18.0 0.2 2.9 3 0 0 3 3 3 1 Domain of unknown function DUF11 DUF824 PF05688.11 gi|14521027|ref|NP_126502.1| - 0.0022 17.8 0.3 0.91 9.4 0.4 3.0 2 0 0 2 2 2 1 Salmonella repeat of unknown function (DUF824) SpaA PF17802.1 gi|14521027|ref|NP_126502.1| - 0.02 15.2 0.6 2.5 8.5 0.0 3.2 3 0 0 3 3 3 0 Prealbumin-like fold domain Invasin_D3 PF09134.10 gi|14521027|ref|NP_126502.1| - 0.053 13.8 0.3 7.9 6.9 0.0 3.8 3 1 1 4 4 4 0 Invasin, domain 3 DUF447 PF04289.12 gi|14521028|ref|NP_126503.1| - 4.8e-28 98.1 0.0 5.3e-28 98.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Ribosomal_S19e PF01090.19 gi|14521029|ref|NP_126504.1| - 3.9e-58 195.0 0.0 4.4e-58 194.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 gi|14521029|ref|NP_126504.1| - 4.3e-05 23.4 0.1 0.0006 19.7 0.0 2.6 3 0 0 3 3 3 1 Ribonuclease R winged-helix domain GntR PF00392.21 gi|14521029|ref|NP_126504.1| - 0.00097 18.7 0.3 0.0035 17.0 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_45 PF14947.6 gi|14521029|ref|NP_126504.1| - 0.0097 15.9 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix RuvB_C PF05491.13 gi|14521029|ref|NP_126504.1| - 0.037 13.9 0.0 3.1 7.8 0.0 2.3 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain TrmB PF01978.19 gi|14521029|ref|NP_126504.1| - 0.042 13.7 0.0 0.12 12.2 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB BOFC_N PF08977.10 gi|14521029|ref|NP_126504.1| - 0.076 13.0 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Bypass of Forespore C, N terminal Rrf2 PF02082.20 gi|14521029|ref|NP_126504.1| - 0.12 12.8 0.1 0.55 10.6 0.0 1.9 1 1 1 2 2 2 0 Transcriptional regulator CRS1_YhbY PF01985.21 gi|33356724|ref|NP_126505.2| - 3.4e-14 52.8 1.0 3.4e-14 52.8 1.0 2.0 3 0 0 3 3 3 1 CRS1 / YhbY (CRM) domain Peptidase_M48 PF01435.18 gi|14521031|ref|NP_126506.1| - 2.3e-26 92.8 1.0 4.9e-26 91.7 0.1 1.9 2 1 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|14521031|ref|NP_126506.1| - 0.00041 19.6 0.7 0.0014 17.9 0.1 2.1 1 1 1 2 2 2 1 BlaR1 peptidase M56 DUF2201_N PF13203.6 gi|14521031|ref|NP_126506.1| - 0.03 13.9 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain MRP-S25 PF13741.6 gi|14521031|ref|NP_126506.1| - 0.053 13.1 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein S25 SLATT_5 PF18160.1 gi|14521031|ref|NP_126506.1| - 0.19 11.1 0.1 0.19 11.1 0.1 2.3 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF2116 PF09889.9 gi|14521031|ref|NP_126506.1| - 6.6 6.8 6.5 19 5.3 0.2 3.3 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Aminotran_1_2 PF00155.21 gi|14521032|ref|NP_126507.1| - 6.6e-61 206.5 0.0 7.4e-61 206.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|14521032|ref|NP_126507.1| - 5.3e-09 35.8 0.0 8e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|14521032|ref|NP_126507.1| - 8.2e-08 31.9 0.0 2.5e-07 30.4 0.0 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|14521032|ref|NP_126507.1| - 8.5e-08 31.5 0.0 3.2e-06 26.4 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|14521032|ref|NP_126507.1| - 0.00074 18.2 0.0 0.0011 17.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme UvsW PF11637.8 gi|14521032|ref|NP_126507.1| - 0.13 12.4 0.2 1.1 9.4 0.1 2.5 2 0 0 2 2 2 0 ATP-dependant DNA helicase UvsW NOG1_N PF17835.1 gi|14521033|ref|NP_126508.1| - 6.4e-54 182.2 2.1 6.4e-54 182.2 2.1 1.9 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|14521033|ref|NP_126508.1| - 1.6e-24 85.4 0.1 3.6e-24 84.3 0.1 1.7 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|14521033|ref|NP_126508.1| - 1.3e-20 73.6 0.0 3e-20 72.4 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|14521033|ref|NP_126508.1| - 5e-20 71.6 0.0 7.2e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|14521033|ref|NP_126508.1| - 4.2e-10 39.8 0.3 0.00049 20.0 0.1 2.8 2 1 0 2 2 2 2 RsgA GTPase Ras PF00071.22 gi|14521033|ref|NP_126508.1| - 2e-08 34.0 0.3 3e-07 30.2 0.3 2.2 1 1 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 gi|14521033|ref|NP_126508.1| - 5.7e-08 32.5 1.2 0.016 14.7 0.1 3.4 2 1 1 3 3 3 2 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 gi|14521033|ref|NP_126508.1| - 8.3e-06 25.6 0.9 0.00012 21.8 0.9 2.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Arf PF00025.21 gi|14521033|ref|NP_126508.1| - 2.2e-05 24.0 0.1 0.00048 19.6 0.1 2.3 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 gi|14521033|ref|NP_126508.1| - 6.6e-05 22.9 0.1 0.00021 21.2 0.1 1.8 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MeaB PF03308.16 gi|14521033|ref|NP_126508.1| - 0.00061 18.9 0.9 0.5 9.3 0.0 2.7 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|14521033|ref|NP_126508.1| - 0.0091 16.4 0.1 0.045 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA ATPase domain Roc PF08477.13 gi|14521033|ref|NP_126508.1| - 0.01 16.1 0.0 1 9.6 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_23 PF13476.6 gi|14521033|ref|NP_126508.1| - 0.013 16.0 2.4 0.16 12.4 2.3 2.3 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 gi|14521033|ref|NP_126508.1| - 0.014 15.0 0.0 3.2 7.3 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|14521033|ref|NP_126508.1| - 0.021 15.3 0.0 0.068 13.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 gi|14521033|ref|NP_126508.1| - 0.034 14.2 0.6 1.3 9.0 0.6 3.1 1 1 0 1 1 1 0 Dynamin family SRPRB PF09439.10 gi|14521033|ref|NP_126508.1| - 0.047 13.1 0.0 0.086 12.3 0.0 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_29 PF13555.6 gi|14521033|ref|NP_126508.1| - 0.053 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|14521033|ref|NP_126508.1| - 0.054 13.2 0.1 0.14 11.9 0.1 1.7 1 1 0 1 1 1 0 AAA domain MnmE_helical PF12631.7 gi|14521033|ref|NP_126508.1| - 0.064 13.4 0.0 0.098 12.8 0.0 1.3 1 1 0 1 1 1 0 MnmE helical domain Gtr1_RagA PF04670.12 gi|14521033|ref|NP_126508.1| - 0.068 12.5 0.0 0.092 12.1 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region KTI12 PF08433.10 gi|14521033|ref|NP_126508.1| - 0.099 12.1 0.1 0.56 9.6 0.0 2.2 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AIG1 PF04548.16 gi|14521033|ref|NP_126508.1| - 0.099 12.0 0.3 2.2 7.6 0.0 2.6 3 0 0 3 3 3 0 AIG1 family ATP_bind_1 PF03029.17 gi|14521033|ref|NP_126508.1| - 0.11 12.3 0.2 9.6 5.9 0.1 2.7 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein G-alpha PF00503.20 gi|14521033|ref|NP_126508.1| - 0.11 11.6 0.0 1.4 8.0 0.1 2.2 2 0 0 2 2 2 0 G-protein alpha subunit KAP_NTPase PF07693.14 gi|14521033|ref|NP_126508.1| - 0.13 11.5 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain ABC_tran PF00005.27 gi|14521033|ref|NP_126508.1| - 0.15 12.6 0.0 0.42 11.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter NTPase_1 PF03266.15 gi|14521033|ref|NP_126508.1| - 0.21 11.5 2.3 2.1 8.2 0.0 2.9 3 0 0 3 3 3 0 NTPase DUF996 PF06195.13 gi|14521034|ref|NP_126509.1| - 8.8e-30 103.8 24.9 8.8e-30 103.8 24.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF996) DUF898 PF05987.13 gi|14521034|ref|NP_126509.1| - 0.45 9.5 13.2 0.2 10.7 9.8 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF898) UPF0239 PF06783.11 gi|14521034|ref|NP_126509.1| - 3.1 8.1 5.8 18 5.6 1.9 2.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) DUF2284 PF10050.9 gi|14521035|ref|NP_126510.1| - 1.4e-35 122.4 0.6 1.8e-35 122.1 0.6 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) GCV_H PF01597.19 gi|14521036|ref|NP_126511.1| - 2.1e-48 163.2 3.2 2.5e-48 163.0 3.2 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|14521036|ref|NP_126511.1| - 6e-08 32.4 1.1 6e-08 32.4 1.1 1.8 2 0 0 2 2 2 1 Biotin-requiring enzyme RnfC_N PF13375.6 gi|14521036|ref|NP_126511.1| - 8.6e-06 25.6 0.1 1.1e-05 25.3 0.1 1.3 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl_2 PF13533.6 gi|14521036|ref|NP_126511.1| - 0.052 13.4 0.1 2.1 8.2 0.0 2.8 2 1 1 3 3 3 0 Biotin-lipoyl like NQRA PF05896.11 gi|14521036|ref|NP_126511.1| - 0.064 12.7 0.2 0.092 12.2 0.2 1.3 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Ribosomal_S17e PF00833.18 gi|14521037|ref|NP_126512.1| - 1.8e-17 63.4 1.9 2.1e-17 63.1 1.9 1.0 1 0 0 1 1 1 1 Ribosomal S17 RNase_J_C PF17770.1 gi|14521037|ref|NP_126512.1| - 0.038 15.0 0.9 0.046 14.8 0.9 1.1 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain Pox_polyA_pol_N PF12630.7 gi|14521037|ref|NP_126512.1| - 0.045 14.1 1.0 0.051 13.9 1.0 1.1 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain PHP PF02811.19 gi|14521038|ref|NP_126513.1| - 5.8e-11 43.0 0.1 2e-10 41.2 0.1 1.8 1 1 0 1 1 1 1 PHP domain PHP_C PF13263.6 gi|14521038|ref|NP_126513.1| - 0.0065 16.2 0.0 0.3 10.9 0.0 3.0 3 0 0 3 3 3 1 PHP-associated Amidohydro_1 PF01979.20 gi|14521038|ref|NP_126513.1| - 0.099 11.9 0.0 0.62 9.3 0.0 2.2 2 2 0 2 2 2 0 Amidohydrolase family PEP_mutase PF13714.6 gi|14521038|ref|NP_126513.1| - 0.18 11.2 0.0 0.28 10.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase Adaptin_N PF01602.20 gi|14521039|ref|NP_126514.1| - 4.7e-06 25.5 0.0 8.7e-06 24.6 0.0 1.4 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 gi|14521039|ref|NP_126514.1| - 0.0064 16.5 0.1 0.011 15.7 0.1 1.5 1 1 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 gi|14521039|ref|NP_126514.1| - 0.013 15.8 0.1 0.21 12.0 0.1 2.1 1 1 0 1 1 1 0 HEAT repeats Ribosomal_L17 PF01196.19 gi|14521039|ref|NP_126514.1| - 0.02 15.8 0.1 0.036 15.0 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein L17 UPF0128 PF03673.13 gi|14521040|ref|NP_126515.1| - 4e-103 343.7 1.3 4.4e-103 343.5 1.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0128) DAHP_snth_FXD PF18152.1 gi|14521040|ref|NP_126515.1| - 0.13 12.1 0.1 13 5.7 0.0 2.3 2 0 0 2 2 2 0 DAHP synthase ferredoxin-like domain THUMP PF02926.17 gi|14521041|ref|NP_126516.1| - 5.7e-28 97.8 3.8 5.7e-28 97.8 3.8 1.8 2 0 0 2 2 2 1 THUMP domain ThiI PF02568.14 gi|14521041|ref|NP_126516.1| - 0.00023 20.8 0.1 0.00048 19.8 0.1 1.5 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) DUF555 PF04475.12 gi|14521042|ref|NP_126517.1| - 3.2e-37 126.9 1.3 3.7e-37 126.7 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) DUF357 PF04010.13 gi|14521043|ref|NP_126518.1| - 8.1e-31 105.9 1.8 1e-30 105.6 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF357) HEPN PF05168.14 gi|14521043|ref|NP_126518.1| - 0.12 12.5 2.1 0.25 11.5 0.2 1.9 2 0 0 2 2 2 0 HEPN domain OrfB_Zn_ribbon PF07282.11 gi|14521044|ref|NP_126519.1| - 2.3e-22 78.7 0.0 4.6e-22 77.7 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|14521044|ref|NP_126519.1| - 2e-05 24.8 0.3 5.4e-05 23.4 0.3 1.7 1 0 0 1 1 1 1 Probable transposase RNA_POL_M_15KD PF02150.16 gi|14521044|ref|NP_126519.1| - 0.0018 18.1 0.9 0.0033 17.3 0.9 1.4 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit DZR PF12773.7 gi|14521044|ref|NP_126519.1| - 0.038 14.0 0.4 0.062 13.3 0.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF285 PF03382.14 gi|14521044|ref|NP_126519.1| - 0.18 11.6 0.0 10 5.9 0.0 2.3 2 0 0 2 2 2 0 Mycoplasma protein of unknown function, DUF285 zf-C4_Topoisom PF01396.19 gi|14521044|ref|NP_126519.1| - 0.49 10.2 2.7 1.1 9.1 2.7 1.7 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger ParBc PF02195.18 gi|33356726|ref|NP_877644.1| - 7.9e-07 29.3 0.0 1e-06 29.0 0.0 1.3 1 1 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.11 gi|33356726|ref|NP_877644.1| - 0.051 13.7 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative ParB-like nuclease Metallophos PF00149.28 gi|14521045|ref|NP_126520.1| - 1.7e-08 35.2 0.3 5.5e-08 33.5 0.0 1.7 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|14521045|ref|NP_126520.1| - 9e-05 22.7 0.0 0.00012 22.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain T2SSE PF00437.20 gi|14521046|ref|NP_126521.1| - 5.6e-10 38.7 0.1 8.6e-10 38.1 0.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_25 PF13481.6 gi|14521046|ref|NP_126521.1| - 0.0057 16.3 0.8 0.11 12.1 0.1 2.1 1 1 1 2 2 2 1 AAA domain ATPase PF06745.13 gi|14521046|ref|NP_126521.1| - 0.0069 15.8 1.7 0.41 9.9 0.5 2.1 1 1 1 2 2 2 2 KaiC AAA_27 PF13514.6 gi|14521046|ref|NP_126521.1| - 0.0095 15.5 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Kinase-PPPase PF03618.14 gi|14521046|ref|NP_126521.1| - 0.011 15.6 0.4 0.6 9.8 0.1 2.1 1 1 1 2 2 2 0 Kinase/pyrophosphorylase CPT PF07931.12 gi|14521046|ref|NP_126521.1| - 0.015 15.1 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein IstB_IS21 PF01695.17 gi|14521046|ref|NP_126521.1| - 0.016 14.9 0.1 0.041 13.6 0.1 1.6 1 1 0 1 1 1 0 IstB-like ATP binding protein TniB PF05621.11 gi|14521046|ref|NP_126521.1| - 0.019 14.4 0.3 0.4 10.1 0.3 2.2 1 1 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 gi|14521046|ref|NP_126521.1| - 0.02 14.4 0.0 0.34 10.4 0.0 2.1 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|14521046|ref|NP_126521.1| - 0.023 15.1 0.0 0.038 14.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain SNF2_N PF00176.23 gi|14521046|ref|NP_126521.1| - 0.064 12.0 0.1 0.068 11.9 0.1 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain cobW PF02492.19 gi|14521046|ref|NP_126521.1| - 0.064 12.8 0.0 0.13 11.9 0.0 1.6 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|14521046|ref|NP_126521.1| - 0.068 13.4 0.1 0.15 12.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain B12-binding PF02310.19 gi|14521046|ref|NP_126521.1| - 0.087 12.9 0.1 0.38 10.8 0.0 2.0 2 0 0 2 2 2 0 B12 binding domain FtsK_SpoIIIE PF01580.18 gi|14521046|ref|NP_126521.1| - 0.095 12.0 0.1 0.22 10.9 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family CobU PF02283.16 gi|14521046|ref|NP_126521.1| - 0.13 11.8 0.1 0.39 10.3 0.1 1.8 1 1 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Aminotran_5 PF00266.19 gi|14521047|ref|NP_126522.1| - 2.9e-36 125.2 0.0 3.5e-36 125.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|14521047|ref|NP_126522.1| - 2.9e-06 26.7 0.0 4.6e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|14521047|ref|NP_126522.1| - 0.00023 19.8 0.0 0.00033 19.3 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SepSecS PF05889.13 gi|14521047|ref|NP_126522.1| - 0.024 13.4 0.1 0.06 12.0 0.0 1.6 2 0 0 2 2 2 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS TFA2_Winged_2 PF18121.1 gi|14521047|ref|NP_126522.1| - 0.068 12.9 0.6 0.6 9.9 0.0 2.7 3 0 0 3 3 3 0 TFA2 Winged helix domain 2 Kdo PF06293.14 gi|14521048|ref|NP_126523.1| - 0.0012 18.2 0.0 0.0023 17.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 gi|14521048|ref|NP_126523.1| - 0.0022 17.6 0.2 0.29 10.7 0.1 2.2 1 1 1 2 2 2 2 Choline/ethanolamine kinase APH PF01636.23 gi|14521048|ref|NP_126523.1| - 0.025 14.5 0.0 0.052 13.5 0.0 1.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family Ribosomal_L40e PF01020.17 gi|14521049|ref|NP_126524.1| - 0.00039 20.3 3.5 0.00051 19.9 3.5 1.3 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|14521049|ref|NP_126524.1| - 0.00061 19.4 1.3 0.00084 19.0 1.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|14521049|ref|NP_126524.1| - 0.0033 17.4 0.5 0.0035 17.3 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|14521049|ref|NP_126524.1| - 0.0069 15.8 2.7 0.0092 15.4 2.7 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|14521049|ref|NP_126524.1| - 0.0098 15.5 5.2 0.017 14.8 5.2 1.5 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-HIT PF04438.16 gi|14521049|ref|NP_126524.1| - 0.016 15.1 3.2 0.2 11.6 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger Rubredoxin_2 PF18073.1 gi|14521049|ref|NP_126524.1| - 0.019 14.7 0.8 4.2 7.2 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain RNA_POL_M_15KD PF02150.16 gi|14521049|ref|NP_126524.1| - 0.53 10.2 4.1 6.4 6.8 3.9 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit MM_CoA_mutase PF01642.22 gi|14521050|ref|NP_126525.1| - 4.2e-240 797.6 0.1 4.9e-240 797.4 0.1 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Syntaxin-18_N PF10496.9 gi|14521050|ref|NP_126525.1| - 5.2 7.4 6.8 13 6.1 0.1 2.8 3 0 0 3 3 3 0 SNARE-complex protein Syntaxin-18 N-terminus SDF PF00375.18 gi|14521051|ref|NP_126526.1| - 3.3e-129 431.3 40.3 3.7e-129 431.2 40.3 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Romo1 PF10247.9 gi|14521051|ref|NP_126526.1| - 1.2 9.6 6.0 0.59 10.5 0.8 3.2 2 1 1 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 Syndecan PF01034.20 gi|14521051|ref|NP_126526.1| - 1.7 8.6 12.7 48 4.0 0.0 4.0 3 0 0 3 3 3 0 Syndecan domain UbiD PF01977.16 gi|14521052|ref|NP_126527.1| - 9.6e-97 324.4 0.6 1.1e-96 324.1 0.6 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AdoHcyase_NAD PF00670.21 gi|14521052|ref|NP_126527.1| - 0.082 13.0 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ApbA_C PF08546.11 gi|14521052|ref|NP_126527.1| - 0.11 12.7 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal AAA_21 PF13304.6 gi|14521052|ref|NP_126527.1| - 0.17 11.6 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system THUMP PF02926.17 gi|14521053|ref|NP_126528.1| - 2.5e-22 79.5 2.1 2.5e-22 79.5 2.1 2.1 2 0 0 2 2 2 1 THUMP domain EIF_2_alpha PF07541.12 gi|14521054|ref|NP_126529.1| - 3.6e-23 81.9 0.1 1.5e-22 79.9 0.0 2.0 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|14521054|ref|NP_126529.1| - 8.3e-15 54.9 0.0 2.5e-14 53.4 0.0 1.9 1 0 0 1 1 1 1 S1 RNA binding domain Nop10p PF04135.12 gi|14521055|ref|NP_126530.1| - 2e-28 98.2 4.5 2.2e-28 98.0 4.5 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|14521055|ref|NP_126530.1| - 9.3e-05 21.9 0.8 0.00012 21.5 0.8 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|14521055|ref|NP_126530.1| - 0.00024 19.1 0.2 0.00024 19.1 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 DUF35_N PF12172.8 gi|14521055|ref|NP_126530.1| - 0.0028 17.5 3.1 0.0028 17.5 3.1 2.0 1 1 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-NADH-PPase PF09297.11 gi|14521055|ref|NP_126530.1| - 0.004 16.8 3.3 0.38 10.5 0.4 2.2 2 0 0 2 2 2 2 NADH pyrophosphatase zinc ribbon domain NRDD PF13597.6 gi|14521055|ref|NP_126530.1| - 0.0054 15.6 1.0 0.0059 15.5 1.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase zf-tcix PF14952.6 gi|14521055|ref|NP_126530.1| - 0.008 15.8 6.4 0.0082 15.7 1.1 2.3 2 0 0 2 2 2 1 Putative treble-clef, zinc-finger, Zn-binding DZR PF12773.7 gi|14521055|ref|NP_126530.1| - 0.0082 16.1 0.9 0.011 15.7 0.9 1.3 1 0 0 1 1 1 1 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|14521055|ref|NP_126530.1| - 0.0086 16.1 3.3 0.31 11.1 0.6 2.2 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain Prim_Zn_Ribbon PF08273.12 gi|14521055|ref|NP_126530.1| - 0.015 15.6 0.8 1.1 9.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-C4_Topoisom PF01396.19 gi|14521055|ref|NP_126530.1| - 0.021 14.6 3.6 1 9.2 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-nanos PF05741.13 gi|14521055|ref|NP_126530.1| - 0.027 14.7 2.0 0.12 12.6 2.0 1.9 1 1 0 1 1 1 0 Nanos RNA binding domain zf-ISL3 PF14690.6 gi|14521055|ref|NP_126530.1| - 0.04 14.6 7.5 30 5.4 7.5 2.3 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CpXC PF14353.6 gi|14521055|ref|NP_126530.1| - 0.074 13.1 3.1 0.7 10.0 0.1 2.1 1 1 1 2 2 2 0 CpXC protein Cys_rich_KTR PF14205.6 gi|14521055|ref|NP_126530.1| - 0.074 12.9 3.9 0.66 9.8 0.3 2.2 1 1 1 2 2 2 0 Cysteine-rich KTR zf-H2C2_2 PF13465.6 gi|14521055|ref|NP_126530.1| - 0.15 12.5 3.7 6.9 7.3 0.3 2.5 2 0 0 2 2 2 0 Zinc-finger double domain zf-ribbon_3 PF13248.6 gi|14521055|ref|NP_126530.1| - 0.16 11.4 8.3 1.4 8.4 0.6 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|14521055|ref|NP_126530.1| - 0.19 11.9 6.2 17 5.7 6.2 2.3 1 1 0 1 1 1 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|14521055|ref|NP_126530.1| - 0.22 11.1 7.0 4 7.0 0.8 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding zf-FPG_IleRS PF06827.14 gi|14521055|ref|NP_126530.1| - 0.23 11.4 7.3 0.56 10.1 0.9 2.3 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS zinc_ribbon_2 PF13240.6 gi|14521055|ref|NP_126530.1| - 0.24 11.2 8.2 2.5 7.9 1.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|14521055|ref|NP_126530.1| - 0.31 10.4 4.1 1.2 8.5 0.3 2.2 1 1 1 2 2 2 0 Transcription factor zinc-finger Cys_rich_CPCC PF14206.6 gi|14521055|ref|NP_126530.1| - 0.34 10.8 3.2 0.69 9.8 3.2 1.6 1 1 0 1 1 1 0 Cysteine-rich CPCC zf_CopZ PF18423.1 gi|14521055|ref|NP_126530.1| - 0.58 10.2 4.2 2.1 8.4 0.5 2.1 2 0 0 2 2 2 0 Zinc binding domain zf-RRN7 PF11781.8 gi|14521055|ref|NP_126530.1| - 0.62 9.8 4.9 1.3 8.8 0.3 2.2 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn_Tnp_IS1595 PF12760.7 gi|14521055|ref|NP_126530.1| - 0.86 9.6 7.1 3 7.9 0.5 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|14521055|ref|NP_126530.1| - 0.99 9.8 6.7 1.8 9.0 0.5 2.1 1 1 1 2 2 2 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.11 gi|14521055|ref|NP_126530.1| - 1 9.3 4.1 2.2 8.3 0.2 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf_C2H2_10 PF18414.1 gi|14521055|ref|NP_126530.1| - 1.5 8.4 5.1 5.7 6.6 0.5 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger zf-C2HC_2 PF13913.6 gi|14521055|ref|NP_126530.1| - 2.4 8.1 10.7 7.9 6.5 4.2 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Rad50_zn_hook PF04423.14 gi|14521055|ref|NP_126530.1| - 2.7 7.9 8.6 2.9 7.8 0.4 2.5 3 0 0 3 3 3 0 Rad50 zinc hook motif DUF1610 PF07754.11 gi|14521055|ref|NP_126530.1| - 2.9 8.0 7.5 8.5 6.4 1.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) YacG PF03884.14 gi|14521055|ref|NP_126530.1| - 3.4 7.5 7.1 3.3 7.5 0.9 2.1 1 1 1 2 2 2 0 DNA gyrase inhibitor YacG Zn-C2H2_12 PF18112.1 gi|14521055|ref|NP_126530.1| - 5.9 7.4 7.5 4.6 7.8 0.6 2.3 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain PAC2 PF09754.9 gi|14521056|ref|NP_126531.1| - 4.4e-48 164.1 0.0 5.2e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Pantoate_transf PF02548.15 gi|14521057|ref|NP_126532.1| - 3.2e-106 354.5 0.1 3.6e-106 354.3 0.1 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|14521057|ref|NP_126532.1| - 2.4e-10 40.3 0.4 1.3e-08 34.7 0.1 2.2 2 0 0 2 2 2 2 Phosphoenolpyruvate phosphomutase NanE PF04131.14 gi|14521057|ref|NP_126532.1| - 0.0096 15.1 1.0 1.9 7.6 0.0 3.0 3 0 0 3 3 3 2 Putative N-acetylmannosamine-6-phosphate epimerase RuvA_C PF07499.13 gi|14521057|ref|NP_126532.1| - 0.1 13.0 0.2 1.4 9.4 0.0 2.5 2 0 0 2 2 2 0 RuvA, C-terminal domain Peptidase_U32 PF01136.19 gi|14521057|ref|NP_126532.1| - 0.12 11.5 0.1 0.23 10.6 0.1 1.4 1 0 0 1 1 1 0 Peptidase family U32 EamA PF00892.20 gi|33356728|ref|NP_126533.2| - 7.9e-30 103.8 35.2 1.7e-20 73.6 14.6 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.6 gi|33356728|ref|NP_126533.2| - 0.00025 20.7 4.4 0.00025 20.7 4.4 2.0 2 0 0 2 2 2 1 Putative multidrug resistance efflux transporter ParA PF10609.9 gi|14521059|ref|NP_126534.1| - 1.7e-95 319.2 1.5 2.1e-95 318.9 1.5 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|14521059|ref|NP_126534.1| - 2.4e-13 50.3 0.0 6e-13 49.0 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|14521059|ref|NP_126534.1| - 1.1e-11 44.9 0.5 1.2e-10 41.6 0.5 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|14521059|ref|NP_126534.1| - 6.4e-07 28.9 0.1 9.5e-06 25.1 0.0 2.0 2 0 0 2 2 2 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|14521059|ref|NP_126534.1| - 8.7e-06 25.1 0.7 0.00032 20.0 0.4 2.3 2 0 0 2 2 2 1 Anion-transporting ATPase Fer4_NifH PF00142.18 gi|14521059|ref|NP_126534.1| - 1.5e-05 24.6 0.8 0.00014 21.4 0.8 2.1 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.20 gi|14521059|ref|NP_126534.1| - 0.00034 20.5 0.0 0.00055 19.9 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_25 PF13481.6 gi|14521059|ref|NP_126534.1| - 0.00063 19.4 0.0 0.00099 18.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain CLP1_P PF16575.5 gi|14521059|ref|NP_126534.1| - 0.0095 15.7 0.0 0.027 14.2 0.0 1.8 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop RsgA_GTPase PF03193.16 gi|14521059|ref|NP_126534.1| - 0.011 15.7 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase RecA PF00154.21 gi|14521059|ref|NP_126534.1| - 0.012 15.1 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein MeaB PF03308.16 gi|14521059|ref|NP_126534.1| - 0.014 14.4 0.5 0.027 13.5 0.0 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DAP3 PF10236.9 gi|14521059|ref|NP_126534.1| - 0.016 14.4 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 VirC1 PF07015.11 gi|14521059|ref|NP_126534.1| - 0.035 13.4 0.1 0.06 12.6 0.1 1.3 1 0 0 1 1 1 0 VirC1 protein AAA_18 PF13238.6 gi|14521059|ref|NP_126534.1| - 0.039 14.5 0.0 0.084 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain CBP_BcsQ PF06564.12 gi|14521059|ref|NP_126534.1| - 0.06 12.8 0.1 0.11 11.9 0.1 1.5 1 1 0 1 1 1 0 Cellulose biosynthesis protein BcsQ Desulfoferrod_N PF06397.12 gi|14521059|ref|NP_126534.1| - 0.076 12.7 0.2 0.16 11.6 0.2 1.6 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain zinc_ribbon_2 PF13240.6 gi|14521059|ref|NP_126534.1| - 0.12 12.2 0.4 0.19 11.5 0.4 1.3 1 0 0 1 1 1 0 zinc-ribbon domain RNA_helicase PF00910.22 gi|14521059|ref|NP_126534.1| - 0.13 12.7 0.0 0.3 11.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_16 PF13191.6 gi|14521059|ref|NP_126534.1| - 0.14 12.5 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain PhnA_Zn_Ribbon PF08274.12 gi|14521059|ref|NP_126534.1| - 0.15 12.0 0.1 0.22 11.5 0.1 1.2 1 0 0 1 1 1 0 PhnA Zinc-Ribbon ASCH PF04266.14 gi|14521060|ref|NP_126535.1| - 5.8e-05 23.6 0.3 8e-05 23.2 0.3 1.3 1 0 0 1 1 1 1 ASCH domain RMMBL PF07521.12 gi|14521060|ref|NP_126535.1| - 0.0022 17.9 0.0 0.0059 16.5 0.0 1.7 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain DUF234 PF03008.14 gi|14521061|ref|NP_126536.1| - 1.7e-27 95.8 5.9 1.8e-27 95.7 3.9 2.1 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function ATPase_2 PF01637.18 gi|14521061|ref|NP_126536.1| - 2.9e-27 96.1 4.4 1.6e-26 93.7 1.2 2.8 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521061|ref|NP_126536.1| - 3.5e-10 40.0 0.1 9.6e-10 38.6 0.1 1.7 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14521061|ref|NP_126536.1| - 6.2e-05 23.3 0.0 0.0003 21.1 0.0 2.1 2 1 0 2 2 2 1 AAA domain UPF0102 PF02021.17 gi|14521061|ref|NP_126536.1| - 0.00023 21.4 1.3 0.00049 20.3 0.3 2.1 2 0 0 2 2 2 1 Uncharacterised protein family UPF0102 TrmB PF01978.19 gi|14521061|ref|NP_126536.1| - 0.011 15.6 0.8 0.07 13.0 0.1 2.3 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB TniB PF05621.11 gi|14521061|ref|NP_126536.1| - 0.017 14.5 0.2 2 7.8 0.0 2.7 3 0 0 3 3 3 0 Bacterial TniB protein AAA_16 PF13191.6 gi|14521061|ref|NP_126536.1| - 0.043 14.2 0.0 0.092 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain MarR_2 PF12802.7 gi|14521061|ref|NP_126536.1| - 0.044 13.7 0.0 0.099 12.6 0.0 1.6 1 0 0 1 1 1 0 MarR family AAA PF00004.29 gi|14521061|ref|NP_126536.1| - 0.047 14.1 0.0 0.1 13.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) malic PF00390.19 gi|14521062|ref|NP_126537.1| - 1.3e-34 119.6 0.1 1.2e-24 87.1 0.1 2.5 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|14521062|ref|NP_126537.1| - 2e-20 73.1 4.7 1.5e-11 44.1 0.1 2.9 2 1 0 2 2 2 2 Malic enzyme, NAD binding domain Ribosomal_S11 PF00411.19 gi|14521062|ref|NP_126537.1| - 0.049 14.0 1.1 1.4 9.3 0.1 2.4 2 0 0 2 2 2 0 Ribosomal protein S11 ThiF PF00899.21 gi|14521062|ref|NP_126537.1| - 0.26 10.6 0.8 0.44 9.8 0.8 1.3 1 0 0 1 1 1 0 ThiF family F420_oxidored PF03807.17 gi|14521062|ref|NP_126537.1| - 0.32 11.6 2.0 1.6 9.3 0.2 3.0 3 2 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Ldh_2 PF02615.14 gi|14521063|ref|NP_126538.1| - 4.2e-134 446.9 0.0 4.8e-134 446.7 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase CARDB PF07705.11 gi|14521064|ref|NP_126539.1| - 8.7e-20 70.9 6.8 2.3e-19 69.6 6.8 1.8 1 0 0 1 1 1 1 CARDB Chorein_N PF12624.7 gi|14521064|ref|NP_126539.1| - 0.0032 17.6 0.8 18 5.5 0.1 3.5 3 0 0 3 3 3 1 N-terminal region of Chorein or VPS13 PaREP1 PF05942.11 gi|14521064|ref|NP_126539.1| - 0.019 14.9 1.3 0.036 14.0 1.3 1.4 1 0 0 1 1 1 0 Archaeal PaREP1/PaREP8 family DUF11 PF01345.18 gi|14521064|ref|NP_126539.1| - 0.024 14.9 1.0 0.064 13.6 1.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF11 Lysyl_oxidase PF01186.17 gi|14521064|ref|NP_126539.1| - 0.076 12.7 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 Lysyl oxidase PKD PF00801.20 gi|14521064|ref|NP_126539.1| - 0.087 12.7 1.6 0.96 9.3 0.3 3.2 2 1 0 2 2 2 0 PKD domain LVIVD PF08309.11 gi|14521064|ref|NP_126539.1| - 1.5 8.2 11.4 12 5.3 0.0 4.9 5 0 0 5 5 5 0 LVIVD repeat AAA PF00004.29 gi|14521065|ref|NP_126540.1| - 4.2e-41 140.5 0.1 3.3e-40 137.6 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 gi|14521065|ref|NP_126540.1| - 1e-07 31.8 0.1 3.6e-07 30.1 0.1 1.9 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain AAA_16 PF13191.6 gi|14521065|ref|NP_126540.1| - 2.8e-07 31.1 1.1 0.0003 21.2 0.1 3.1 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 gi|14521065|ref|NP_126540.1| - 3e-06 27.5 0.1 0.0057 16.9 0.0 2.6 1 1 1 2 2 2 2 AAA domain RuvB_N PF05496.12 gi|14521065|ref|NP_126540.1| - 3.7e-06 26.8 0.0 6.8e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|14521065|ref|NP_126540.1| - 2.6e-05 24.0 0.0 5.8e-05 22.9 0.0 1.7 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_5 PF07728.14 gi|14521065|ref|NP_126540.1| - 2.6e-05 24.2 0.1 0.00024 21.1 0.1 2.5 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|14521065|ref|NP_126540.1| - 0.00016 21.0 0.2 0.0017 17.7 0.0 2.2 1 1 1 2 2 2 1 TIP49 P-loop domain Bac_DnaA PF00308.18 gi|14521065|ref|NP_126540.1| - 0.00033 20.6 0.0 0.00068 19.5 0.0 1.5 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_18 PF13238.6 gi|14521065|ref|NP_126540.1| - 0.00096 19.7 0.1 0.0067 17.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_2 PF07724.14 gi|14521065|ref|NP_126540.1| - 0.0013 18.9 0.0 0.0025 17.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 gi|14521065|ref|NP_126540.1| - 0.0016 18.6 0.1 0.0095 16.1 0.0 2.3 2 1 0 2 2 1 1 AAA domain AAA_17 PF13207.6 gi|14521065|ref|NP_126540.1| - 0.0027 18.1 0.1 0.21 12.0 0.0 2.5 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 gi|14521065|ref|NP_126540.1| - 0.003 16.7 0.0 0.0047 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|14521065|ref|NP_126540.1| - 0.0062 16.6 0.0 0.017 15.2 0.0 1.7 2 0 0 2 2 1 1 AAA domain Mg_chelatase PF01078.21 gi|14521065|ref|NP_126540.1| - 0.0072 15.7 0.0 0.019 14.4 0.0 1.7 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|14521065|ref|NP_126540.1| - 0.0074 15.7 0.1 3.8 6.8 0.0 2.4 2 0 0 2 2 2 2 KaiC RNA_helicase PF00910.22 gi|14521065|ref|NP_126540.1| - 0.0091 16.4 0.0 0.039 14.3 0.0 2.0 2 0 0 2 2 2 1 RNA helicase AAA_lid_3 PF17862.1 gi|14521065|ref|NP_126540.1| - 0.022 14.6 0.0 0.058 13.2 0.0 1.8 1 0 0 1 1 1 0 AAA+ lid domain AAA_25 PF13481.6 gi|14521065|ref|NP_126540.1| - 0.026 14.1 0.6 0.28 10.7 0.1 2.3 1 1 0 2 2 2 0 AAA domain AFG1_ATPase PF03969.16 gi|14521065|ref|NP_126540.1| - 0.028 13.3 0.0 0.056 12.3 0.0 1.6 1 1 0 1 1 1 0 AFG1-like ATPase AAA_28 PF13521.6 gi|14521065|ref|NP_126540.1| - 0.032 14.5 0.2 0.96 9.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|14521065|ref|NP_126540.1| - 0.04 13.6 0.0 0.25 11.0 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|14521065|ref|NP_126540.1| - 0.046 13.2 0.0 0.093 12.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Cytidylate_kin PF02224.18 gi|14521065|ref|NP_126540.1| - 0.055 13.2 0.1 0.33 10.6 0.0 2.1 2 0 0 2 2 2 0 Cytidylate kinase AAA_24 PF13479.6 gi|14521065|ref|NP_126540.1| - 0.077 12.7 0.0 0.23 11.2 0.0 1.8 2 1 0 2 2 1 0 AAA domain PhoH PF02562.16 gi|14521065|ref|NP_126540.1| - 0.079 12.4 0.0 0.47 9.9 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein AAA_11 PF13086.6 gi|14521065|ref|NP_126540.1| - 0.14 11.9 0.3 0.71 9.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain Ribosomal_L15e PF00827.17 gi|14521066|ref|NP_126541.1| - 3.6e-90 300.8 7.4 4.1e-90 300.6 7.4 1.0 1 0 0 1 1 1 1 Ribosomal L15 HycI PF01750.18 gi|14521067|ref|NP_126542.1| - 3.1e-22 78.8 0.1 3.6e-22 78.6 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NTP_transf_3 PF12804.7 gi|14521068|ref|NP_126543.1| - 5.4e-29 101.6 0.0 6.4e-29 101.4 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|14521068|ref|NP_126543.1| - 8.7e-06 25.6 0.0 1.2e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|14521068|ref|NP_126543.1| - 3.9e-05 23.7 0.0 0.00022 21.2 0.0 1.9 2 0 0 2 2 2 1 Cytidylyltransferase NTP_transferase PF00483.23 gi|14521068|ref|NP_126543.1| - 0.027 14.0 0.0 0.045 13.3 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyl transferase Radical_SAM PF04055.21 gi|14521069|ref|NP_126544.1| - 1.3e-14 55.0 0.5 4e-14 53.3 0.1 1.9 2 1 0 2 2 2 1 Radical SAM superfamily CbiA PF01656.23 gi|14521070|ref|NP_126545.1| - 8.1e-17 61.5 0.0 1.2e-16 60.9 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|14521070|ref|NP_126545.1| - 2.5e-15 56.6 0.4 3.4e-09 36.5 0.0 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_21 PF14697.6 gi|14521070|ref|NP_126545.1| - 2.1e-09 37.4 8.6 3.3e-09 36.7 8.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14521070|ref|NP_126545.1| - 2.6e-09 36.8 14.9 2.1e-05 24.4 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|14521070|ref|NP_126545.1| - 5.1e-09 35.6 14.5 4.4e-05 23.1 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_NifH PF00142.18 gi|14521070|ref|NP_126545.1| - 2.8e-07 30.3 0.1 0.017 14.6 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_10 PF13237.6 gi|14521070|ref|NP_126545.1| - 1.6e-06 28.1 5.1 0.016 15.3 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14521070|ref|NP_126545.1| - 4.3e-06 27.2 12.0 9.9e-06 26.1 12.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain AAA_31 PF13614.6 gi|14521070|ref|NP_126545.1| - 5e-06 26.5 0.0 3.3e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain Fer4_9 PF13187.6 gi|14521070|ref|NP_126545.1| - 7.9e-06 26.0 23.8 4.3e-05 23.6 11.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521070|ref|NP_126545.1| - 2e-05 25.4 8.4 0.045 14.7 3.1 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|14521070|ref|NP_126545.1| - 2.7e-05 24.0 12.1 0.0064 16.5 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14521070|ref|NP_126545.1| - 4.4e-05 23.9 6.3 0.021 15.4 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain ArsA_ATPase PF02374.15 gi|14521070|ref|NP_126545.1| - 6.7e-05 22.2 1.8 0.0041 16.3 0.4 2.7 2 1 1 3 3 3 1 Anion-transporting ATPase Fer4_8 PF13183.6 gi|14521070|ref|NP_126545.1| - 0.00011 22.6 6.5 0.047 14.1 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain MipZ PF09140.11 gi|14521070|ref|NP_126545.1| - 0.00019 20.8 0.0 0.00055 19.3 0.0 1.7 2 0 0 2 2 2 1 ATPase MipZ Fer4_4 PF12800.7 gi|14521070|ref|NP_126545.1| - 0.00024 21.3 11.4 0.016 15.7 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_25 PF13481.6 gi|14521070|ref|NP_126545.1| - 0.0025 17.4 0.0 0.025 14.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain VirC1 PF07015.11 gi|14521070|ref|NP_126545.1| - 0.048 13.0 0.0 0.76 9.0 0.0 2.1 2 0 0 2 2 2 0 VirC1 protein PhoH PF02562.16 gi|14521070|ref|NP_126545.1| - 0.11 12.0 0.2 0.24 10.8 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein CBP_BcsQ PF06564.12 gi|14521070|ref|NP_126545.1| - 0.11 11.9 0.0 3.8 6.9 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Fer4_3 PF12798.7 gi|14521070|ref|NP_126545.1| - 0.26 12.3 18.1 1 10.5 6.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|14521070|ref|NP_126545.1| - 0.61 11.0 8.8 1.3 10.0 0.8 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|14521070|ref|NP_126545.1| - 1.9 8.7 9.5 2.1 8.6 2.0 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain CbiA PF01656.23 gi|14521071|ref|NP_126546.1| - 3.3e-22 78.9 0.0 4.2e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|14521071|ref|NP_126546.1| - 3.1e-17 62.8 0.0 6.1e-09 35.7 0.0 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_21 PF14697.6 gi|14521071|ref|NP_126546.1| - 3e-13 49.7 11.9 6.6e-13 48.6 10.9 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|14521071|ref|NP_126546.1| - 3e-08 33.2 17.3 7.6e-06 25.5 4.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521071|ref|NP_126546.1| - 8.3e-07 29.5 26.9 2.5e-05 24.8 13.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521071|ref|NP_126546.1| - 1.4e-06 28.0 11.5 0.00091 19.2 1.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|14521071|ref|NP_126546.1| - 3.1e-06 27.2 12.3 0.0042 17.2 4.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521071|ref|NP_126546.1| - 3.5e-06 27.8 3.1 0.087 13.8 0.9 2.5 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_NifH PF00142.18 gi|14521071|ref|NP_126546.1| - 7.2e-06 25.6 0.0 0.0091 15.5 0.0 2.3 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_17 PF13534.6 gi|14521071|ref|NP_126546.1| - 8.9e-06 26.2 3.4 0.0017 18.9 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain AAA_31 PF13614.6 gi|14521071|ref|NP_126546.1| - 5e-05 23.3 0.0 0.00046 20.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_26 PF13500.6 gi|14521071|ref|NP_126546.1| - 0.00012 22.0 0.4 0.28 11.0 0.0 2.5 2 1 0 2 2 2 2 AAA domain CBP_BcsQ PF06564.12 gi|14521071|ref|NP_126546.1| - 0.00016 21.3 0.0 0.23 10.9 0.0 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ Fer4_9 PF13187.6 gi|14521071|ref|NP_126546.1| - 0.0003 20.9 12.1 0.0005 20.2 12.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain ArsA_ATPase PF02374.15 gi|14521071|ref|NP_126546.1| - 0.00074 18.8 0.0 0.0016 17.7 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase DUF4088 PF13317.6 gi|14521071|ref|NP_126546.1| - 0.015 14.9 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) Fer4_13 PF13370.6 gi|14521071|ref|NP_126546.1| - 0.062 13.8 13.2 0.09 13.3 3.4 2.4 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 gi|14521071|ref|NP_126546.1| - 0.065 13.3 15.1 0.073 13.2 4.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain ETF_QO PF05187.13 gi|14521071|ref|NP_126546.1| - 0.072 13.2 0.8 0.072 13.2 0.8 1.9 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S RsgA_GTPase PF03193.16 gi|14521071|ref|NP_126546.1| - 0.11 12.3 0.0 4 7.3 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase AAA_5 PF07728.14 gi|14521071|ref|NP_126546.1| - 0.18 11.8 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Fer4_4 PF12800.7 gi|14521071|ref|NP_126546.1| - 0.54 10.9 11.9 0.82 10.3 3.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14521071|ref|NP_126546.1| - 1.3 9.6 15.3 81 3.8 2.9 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14521071|ref|NP_126546.1| - 1.8 9.4 11.1 9.1 7.1 2.9 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain DUF1884 PF08967.10 gi|14521072|ref|NP_126547.1| - 1.7e-40 137.1 0.5 1.9e-40 137.0 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1884) NiFeSe_Hases PF00374.19 gi|14521073|ref|NP_126548.1| - 6.8e-29 101.1 0.0 3.6e-12 46.0 0.0 3.3 2 2 1 3 3 3 3 Nickel-dependent hydrogenase UN_NPL4 PF11543.8 gi|14521073|ref|NP_126548.1| - 0.04 14.4 0.0 0.097 13.2 0.0 1.6 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Oxidored_q6 PF01058.22 gi|14521074|ref|NP_126549.1| - 3.7e-26 91.5 0.0 5.4e-26 91.0 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit eIF2_C PF09173.11 gi|14521074|ref|NP_126549.1| - 0.11 12.7 0.1 0.23 11.8 0.1 1.4 1 0 0 1 1 1 0 Initiation factor eIF2 gamma, C terminal Zn_clus PF00172.18 gi|14521074|ref|NP_126549.1| - 1.1 9.5 0.1 1.1 9.5 0.1 2.4 2 0 0 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain DHODB_Fe-S_bind PF10418.9 gi|14521075|ref|NP_126550.1| - 1.9e-13 50.0 1.5 3e-13 49.3 1.5 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|14521075|ref|NP_126550.1| - 2.1e-13 50.8 0.0 3.2e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|14521075|ref|NP_126550.1| - 4.1e-08 33.5 0.0 6.3e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 gi|14521075|ref|NP_126550.1| - 0.00015 22.0 0.0 0.089 12.9 0.0 2.1 1 1 1 2 2 2 2 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 gi|14521075|ref|NP_126550.1| - 0.003 17.6 0.2 0.035 14.2 0.0 2.6 3 1 0 3 3 3 1 FAD-binding domain Fer4_22 PF17179.4 gi|14521076|ref|NP_126551.1| - 7.9e-27 94.0 13.6 1.5e-26 93.1 11.9 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521076|ref|NP_126551.1| - 2.3e-07 30.5 12.5 0.002 18.1 2.4 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|14521076|ref|NP_126551.1| - 1.9e-06 27.8 11.6 0.00097 19.2 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14521076|ref|NP_126551.1| - 3.2e-06 27.6 10.7 0.011 16.4 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|14521076|ref|NP_126551.1| - 7e-06 26.5 11.3 0.0055 17.2 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521076|ref|NP_126551.1| - 1.3e-05 25.5 12.3 4.3e-05 23.9 12.3 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|14521076|ref|NP_126551.1| - 4.8e-05 23.0 16.7 0.011 15.5 4.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|14521076|ref|NP_126551.1| - 0.00034 20.9 1.0 0.00034 20.9 1.0 2.9 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14521076|ref|NP_126551.1| - 0.00042 21.2 9.4 0.077 13.9 0.9 2.7 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|14521076|ref|NP_126551.1| - 0.00074 19.6 16.4 0.014 15.5 1.9 2.7 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|14521076|ref|NP_126551.1| - 0.0018 18.5 2.7 0.66 10.2 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14521076|ref|NP_126551.1| - 0.0034 17.5 14.1 0.29 11.3 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14521076|ref|NP_126551.1| - 0.0053 16.8 20.1 0.0095 16.0 2.7 2.8 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|14521076|ref|NP_126551.1| - 9.8 6.8 16.5 18 5.9 6.7 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Peptidase_M20 PF01546.28 gi|14521077|ref|NP_126552.1| - 7.6e-35 120.5 0.0 9.9e-35 120.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|14521077|ref|NP_126552.1| - 3.6e-07 30.1 0.0 1.2e-05 25.1 0.0 2.2 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M42 PF05343.14 gi|14521077|ref|NP_126552.1| - 5.7e-06 25.6 0.0 0.0024 16.9 0.0 3.6 4 0 0 4 4 4 2 M42 glutamyl aminopeptidase MFS_1 PF07690.16 gi|14521078|ref|NP_126553.1| - 4.2e-11 42.4 50.6 1.4e-09 37.3 29.4 2.8 1 1 1 2 2 2 2 Major Facilitator Superfamily tRNA-synt_1 PF00133.22 gi|14521079|ref|NP_126554.1| - 2.9e-69 233.9 2.0 2.2e-68 231.0 2.0 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|14521079|ref|NP_126554.1| - 2e-30 105.8 0.9 7.1e-30 104.0 0.9 2.0 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|14521079|ref|NP_126554.1| - 1.1e-24 87.0 0.2 2.5e-11 43.0 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|14521079|ref|NP_126554.1| - 1.5e-10 40.9 0.1 2.5e-05 23.8 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|14521079|ref|NP_126554.1| - 2.2e-10 40.4 1.0 5.1e-10 39.2 0.1 2.0 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|14521079|ref|NP_126554.1| - 7.1e-05 21.9 0.1 0.004 16.1 0.0 2.6 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|14521079|ref|NP_126554.1| - 0.022 13.7 0.0 0.11 11.4 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class I (R) tRNA-synt_1b PF00579.25 gi|14521079|ref|NP_126554.1| - 0.13 11.5 0.4 0.93 8.7 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) DUF104 PF01954.16 gi|14521080|ref|NP_126555.1| - 5.4e-15 55.6 7.8 6.4e-15 55.3 7.8 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF104 PIN PF01850.21 gi|14521081|ref|NP_126556.1| - 1.4e-13 51.4 0.0 1.6e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 PIN domain SRP_TPR_like PF17004.5 gi|14521081|ref|NP_126556.1| - 0.066 13.2 0.6 0.097 12.7 0.3 1.5 2 0 0 2 2 2 0 Putative TPR-like repeat Peptidase_M24 PF00557.24 gi|14521082|ref|NP_126557.1| - 3.3e-71 239.3 0.3 4.6e-71 238.8 0.3 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|14521082|ref|NP_126557.1| - 2.2e-15 57.5 0.0 3.8e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain EVE PF01878.18 gi|14521083|ref|NP_126558.1| - 3.4e-28 98.5 0.5 3.8e-28 98.3 0.5 1.0 1 0 0 1 1 1 1 EVE domain Dev_Cell_Death PF10539.9 gi|14521083|ref|NP_126558.1| - 0.0017 18.3 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 Development and cell death domain DUF365 PF04033.12 gi|14521084|ref|NP_126559.1| - 6.3e-38 129.0 2.4 1e-37 128.3 2.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF365) EVE PF01878.18 gi|14521084|ref|NP_126559.1| - 0.002 18.1 1.0 0.081 12.9 0.1 2.3 1 1 0 2 2 2 2 EVE domain Hormone_3 PF00159.18 gi|14521084|ref|NP_126559.1| - 0.092 12.8 0.5 3.2 7.9 0.2 2.5 1 1 1 2 2 2 0 Pancreatic hormone peptide DUF1156 PF06634.12 gi|14521085|ref|NP_126560.1| - 2.4e-10 40.3 0.0 6.2e-10 39.0 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) UPF0020 PF01170.18 gi|14521085|ref|NP_126560.1| - 3.1e-07 30.3 0.0 0.0013 18.5 0.0 2.5 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|14521085|ref|NP_126560.1| - 5.3e-05 22.9 0.0 0.34 10.5 0.0 2.4 2 0 0 2 2 2 2 Conserved hypothetical protein 95 MethyltransfD12 PF02086.15 gi|14521085|ref|NP_126560.1| - 0.015 15.0 0.0 2.4 7.8 0.0 2.7 3 0 0 3 3 3 0 D12 class N6 adenine-specific DNA methyltransferase zinc_ribbon_4 PF13717.6 gi|14521085|ref|NP_126560.1| - 0.032 14.2 0.6 1.7 8.7 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain DUF499 PF04465.12 gi|14521086|ref|NP_126561.1| - 2.1e-294 979.3 41.2 2.6e-294 979.0 41.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF499) Helicase_C PF00271.31 gi|14521088|ref|NP_126563.1| - 1.7e-22 79.9 0.0 1.1e-21 77.2 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF3883 PF13020.6 gi|14521088|ref|NP_126563.1| - 1.2e-16 60.5 0.6 5.2e-16 58.5 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF3883) SNF2_N PF00176.23 gi|14521088|ref|NP_126563.1| - 5.7e-15 54.9 0.0 1.6e-14 53.4 0.0 1.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 gi|14521088|ref|NP_126563.1| - 1.1e-11 45.0 0.0 2.8e-11 43.7 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|14521088|ref|NP_126563.1| - 1.6e-06 28.0 0.1 5.4e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 gi|14521088|ref|NP_126563.1| - 0.00038 19.7 0.0 0.00086 18.6 0.0 1.5 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase HAD_2 PF13419.6 gi|14521088|ref|NP_126563.1| - 0.0014 18.7 0.4 0.0058 16.7 0.5 2.1 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase PurL_C PF16904.5 gi|14521088|ref|NP_126563.1| - 0.0022 18.3 0.7 0.015 15.6 0.3 2.7 2 0 0 2 2 2 1 Phosphoribosylformylglycinamidine synthase II C-terminus PhoH PF02562.16 gi|14521088|ref|NP_126563.1| - 0.013 14.9 0.1 0.28 10.6 0.0 2.9 3 0 0 3 3 3 0 PhoH-like protein FlbT PF07378.11 gi|14521088|ref|NP_126563.1| - 0.084 13.0 0.1 0.35 10.9 0.0 2.1 2 0 0 2 2 2 0 Flagellar protein FlbT DEAD PF00270.29 gi|14521089|ref|NP_126564.1| - 5.2e-28 98.0 0.0 1.1e-26 93.7 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|14521089|ref|NP_126564.1| - 4.8e-11 43.0 0.0 3.8e-09 36.9 0.0 3.4 2 1 0 2 2 2 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|14521089|ref|NP_126564.1| - 9.8e-11 42.1 1.0 5.9e-10 39.6 0.1 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix domain ResIII PF04851.15 gi|14521089|ref|NP_126564.1| - 5.2e-10 39.6 0.0 1.1e-09 38.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|14521089|ref|NP_126564.1| - 5.2e-08 32.9 0.0 6.2e-07 29.4 0.0 2.7 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.23 gi|14521089|ref|NP_126564.1| - 0.00021 21.0 0.0 0.035 14.0 0.0 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|14521089|ref|NP_126564.1| - 0.00026 20.7 0.0 0.0014 18.4 0.0 2.3 3 0 0 3 3 3 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 gi|14521089|ref|NP_126564.1| - 0.012 15.9 0.0 0.032 14.5 0.0 1.8 1 0 0 1 1 1 0 Pathogenicity locus ATPase PF06745.13 gi|14521089|ref|NP_126564.1| - 0.032 13.6 0.1 1.9 7.7 0.0 2.6 2 0 0 2 2 2 0 KaiC AAA_30 PF13604.6 gi|14521089|ref|NP_126564.1| - 0.061 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain DSHCT PF08148.12 gi|14521089|ref|NP_126564.1| - 0.088 12.5 0.0 1 9.0 0.0 2.4 3 0 0 3 3 3 0 DSHCT (NUC185) domain AA_kinase PF00696.28 gi|14521090|ref|NP_126565.1| - 2.6e-34 118.9 0.7 5.1e-34 117.9 0.7 1.4 1 1 0 1 1 1 1 Amino acid kinase family PTS_IIB PF02302.17 gi|14521090|ref|NP_126565.1| - 0.051 14.3 1.7 4.3 8.1 0.0 3.4 4 0 0 4 4 4 0 PTS system, Lactose/Cellobiose specific IIB subunit Transketolase_C PF02780.20 gi|14521090|ref|NP_126565.1| - 0.07 13.0 1.5 15 5.5 0.1 3.5 4 0 0 4 4 4 0 Transketolase, C-terminal domain RecX PF02631.16 gi|14521090|ref|NP_126565.1| - 0.082 13.4 0.1 1 9.9 0.0 2.4 2 0 0 2 2 2 0 RecX family DUF357 PF04010.13 gi|14521091|ref|NP_126566.1| - 0.0063 16.6 3.8 5.6 7.1 0.0 4.2 3 1 0 3 3 3 2 Protein of unknown function (DUF357) DUF1778 PF08681.11 gi|14521091|ref|NP_126566.1| - 0.013 15.4 0.5 0.087 12.8 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1778) FIVAR PF07554.13 gi|14521091|ref|NP_126566.1| - 2.5 8.9 12.6 4.8 8.0 1.2 3.8 3 1 0 3 3 3 0 FIVAR domain RecG_N PF17190.4 gi|14521091|ref|NP_126566.1| - 3.2 8.6 7.4 28 5.5 0.2 3.7 2 1 2 4 4 4 0 RecG N-terminal helical domain OAD_beta PF03977.13 gi|14521092|ref|NP_126567.1| - 4.9e-159 529.0 27.7 5.5e-159 528.8 27.7 1.0 1 0 0 1 1 1 1 Na+-transporting oxaloacetate decarboxylase beta subunit TMEM40 PF15817.5 gi|14521092|ref|NP_126567.1| - 0.14 11.9 1.0 0.3 10.8 0.0 2.0 2 1 1 3 3 3 0 Transmembrane protein 40 family Biotin_lipoyl PF00364.22 gi|14521093|ref|NP_126568.1| - 6.5e-24 83.6 1.1 1.4e-23 82.5 1.1 1.6 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|14521093|ref|NP_126568.1| - 6.4e-14 51.5 0.6 6.3e-07 29.1 0.1 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|14521093|ref|NP_126568.1| - 2.8e-07 31.2 1.6 0.011 16.4 0.0 3.1 3 0 0 3 3 3 2 HlyD family secretion protein PTS_EIIA_1 PF00358.20 gi|14521093|ref|NP_126568.1| - 1.4e-05 24.8 1.3 0.007 16.1 0.8 3.0 1 1 1 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HlyD_D23 PF16576.5 gi|14521093|ref|NP_126568.1| - 2.9e-05 23.4 0.1 0.12 11.5 0.0 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion TALPID3 PF15324.6 gi|14521093|ref|NP_126568.1| - 0.0019 16.0 4.3 0.0022 15.8 4.3 1.0 1 0 0 1 1 1 1 Hedgehog signalling target RnfC_N PF13375.6 gi|14521093|ref|NP_126568.1| - 0.0028 17.6 0.7 0.067 13.2 0.1 2.7 1 1 2 3 3 3 1 RnfC Barrel sandwich hybrid domain NQRA PF05896.11 gi|14521093|ref|NP_126568.1| - 0.0071 15.8 0.3 0.1 12.0 0.2 2.1 1 1 1 2 2 2 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DEC-1_N PF04625.13 gi|14521093|ref|NP_126568.1| - 0.033 13.2 1.4 0.046 12.7 1.4 1.3 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region GCV_H PF01597.19 gi|14521093|ref|NP_126568.1| - 0.056 13.3 0.1 0.099 12.5 0.1 1.4 1 0 0 1 1 1 0 Glycine cleavage H-protein Peptidase_M23 PF01551.22 gi|14521093|ref|NP_126568.1| - 0.11 12.7 1.5 1.5 9.0 1.4 3.2 1 1 0 1 1 1 0 Peptidase family M23 PCC_BT PF18140.1 gi|14521093|ref|NP_126568.1| - 0.17 12.2 0.3 0.2 12.0 0.3 1.4 1 1 0 1 1 1 0 Propionyl-coenzyme A carboxylase BT domain YqfD PF06898.11 gi|14521093|ref|NP_126568.1| - 5.5 5.7 5.3 2.5 6.8 0.0 2.4 2 1 1 3 3 3 0 Putative stage IV sporulation protein YqfD OAD_gamma PF04277.13 gi|14521094|ref|NP_126569.1| - 3.8e-15 56.2 0.1 5e-15 55.9 0.1 1.2 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain SCIMP PF15050.6 gi|14521094|ref|NP_126569.1| - 0.0034 17.8 0.1 0.0041 17.6 0.1 1.1 1 0 0 1 1 1 1 SCIMP protein Sensor PF13796.6 gi|14521094|ref|NP_126569.1| - 0.011 15.7 0.0 0.019 15.0 0.0 1.4 1 1 0 1 1 1 0 Putative sensor O-antigen_lig PF13425.6 gi|14521094|ref|NP_126569.1| - 0.037 12.8 0.1 0.039 12.7 0.1 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Cytadhesin_P30 PF07271.11 gi|14521094|ref|NP_126569.1| - 0.04 13.5 0.4 0.048 13.2 0.4 1.0 1 0 0 1 1 1 0 Cytadhesin P30/P32 BT1 PF03092.16 gi|14521094|ref|NP_126569.1| - 0.051 11.8 0.1 0.051 11.8 0.1 1.1 1 0 0 1 1 1 0 BT1 family SieB PF14163.6 gi|14521094|ref|NP_126569.1| - 0.08 12.4 0.9 0.15 11.5 0.7 1.5 1 1 1 2 2 2 0 Super-infection exclusion protein B Carboxyl_trans PF01039.22 gi|14521095|ref|NP_126570.1| - 2.2e-204 679.7 0.2 2.5e-204 679.5 0.2 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|14521095|ref|NP_126570.1| - 1.1e-06 28.3 0.0 2.7e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) Lactamase_B_2 PF12706.7 gi|14521096|ref|NP_126571.1| - 6.8e-06 25.7 0.0 1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14521096|ref|NP_126571.1| - 0.00015 21.9 0.8 0.00028 20.9 0.8 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.25 gi|14521096|ref|NP_126571.1| - 0.00031 21.0 0.0 0.00053 20.2 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Lactamase_B_3 PF13483.6 gi|14521096|ref|NP_126571.1| - 0.023 14.6 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Tautomerase PF01361.21 gi|14521096|ref|NP_126571.1| - 0.042 13.8 0.9 6.3 6.8 0.0 3.6 4 0 0 4 4 4 0 Tautomerase enzyme PrlF_antitoxin PF15937.5 gi|14521096|ref|NP_126571.1| - 0.088 13.3 0.0 1.3 9.5 0.0 2.3 2 0 0 2 2 2 0 prlF antitoxin for toxin YhaV_toxin DUF166 PF02593.14 gi|14521096|ref|NP_126571.1| - 0.11 12.1 0.2 1 8.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function HTH_CodY PF08222.11 gi|14521096|ref|NP_126571.1| - 0.11 12.0 0.0 0.3 10.7 0.0 1.7 1 0 0 1 1 1 0 CodY helix-turn-helix domain Gemini_mov PF01708.16 gi|14521096|ref|NP_126571.1| - 0.14 12.0 0.0 0.31 10.8 0.0 1.5 1 0 0 1 1 1 0 Geminivirus putative movement protein DUF4932 PF16286.5 gi|14521097|ref|NP_126572.1| - 2.8e-49 168.2 9.6 3.9e-49 167.7 9.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4932) Nitroreductase PF00881.24 gi|14521098|ref|NP_126573.1| - 4.2e-29 101.8 0.0 5.2e-29 101.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|14521098|ref|NP_126573.1| - 1.1e-10 41.5 0.0 6e-06 26.0 0.2 2.3 1 1 1 2 2 2 2 Putative TM nitroreductase Rubrerythrin PF02915.17 gi|14521099|ref|NP_126574.1| - 5e-28 98.2 11.2 7.1e-27 94.5 11.2 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|14521099|ref|NP_126574.1| - 8.3e-06 25.8 5.2 1.3e-05 25.1 5.2 1.3 1 1 0 1 1 1 1 Ferritin-like domain Cys_rich_CPCC PF14206.6 gi|14521099|ref|NP_126574.1| - 0.0059 16.4 1.4 0.012 15.4 1.4 1.5 1 0 0 1 1 1 1 Cysteine-rich CPCC zinc_ribbon_2 PF13240.6 gi|14521099|ref|NP_126574.1| - 0.016 14.9 1.7 0.038 13.7 1.8 1.6 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|14521099|ref|NP_126574.1| - 0.028 14.5 0.4 0.046 13.8 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|14521099|ref|NP_126574.1| - 0.045 13.2 2.5 1.3 8.6 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|14521099|ref|NP_126574.1| - 0.097 13.4 0.3 0.15 12.8 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon family zf-RRN7 PF11781.8 gi|14521099|ref|NP_126574.1| - 0.14 11.9 2.7 1 9.1 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 NRDD PF13597.6 gi|14521099|ref|NP_126574.1| - 0.18 10.6 1.9 0.22 10.3 0.8 1.4 1 1 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Prim_Zn_Ribbon PF08273.12 gi|14521099|ref|NP_126574.1| - 0.27 11.6 3.3 3.2 8.1 0.3 2.3 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Zn-ribbon_8 PF09723.10 gi|14521099|ref|NP_126574.1| - 0.34 11.1 4.1 4.1 7.6 4.1 2.3 1 1 1 2 2 2 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|14521099|ref|NP_126574.1| - 0.35 10.9 7.7 6.6 6.9 2.0 2.5 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Rubredoxin PF00301.20 gi|14521099|ref|NP_126574.1| - 0.35 10.9 6.3 1.5 8.9 0.6 2.4 1 1 1 2 2 2 0 Rubredoxin TF_Zn_Ribbon PF08271.12 gi|14521099|ref|NP_126574.1| - 2.4 7.8 5.2 24 4.6 0.4 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding Zn-C2H2_12 PF18112.1 gi|14521099|ref|NP_126574.1| - 2.5 8.7 4.9 17 6.0 0.5 2.9 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain Rubredoxin PF00301.20 gi|14521100|ref|NP_126575.1| - 8.2e-27 93.0 4.9 9.1e-27 92.8 4.9 1.0 1 0 0 1 1 1 1 Rubredoxin zf-Sec23_Sec24 PF04810.15 gi|14521100|ref|NP_126575.1| - 9.9e-05 22.3 0.3 0.14 12.2 0.0 2.1 2 0 0 2 2 2 2 Sec23/Sec24 zinc finger Vps36-NZF-N PF16988.5 gi|14521100|ref|NP_126575.1| - 0.00064 19.1 1.2 0.44 10.0 0.0 2.1 2 0 0 2 2 2 2 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RanBP PF00641.18 gi|14521100|ref|NP_126575.1| - 0.014 14.7 3.3 0.33 10.3 0.2 2.2 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-BED PF02892.15 gi|14521100|ref|NP_126575.1| - 0.015 15.3 0.0 0.29 11.2 0.0 2.0 2 0 0 2 2 2 0 BED zinc finger zinc_ribbon_10 PF10058.9 gi|14521100|ref|NP_126575.1| - 0.022 14.5 0.5 0.89 9.3 0.0 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn_ribbon_SprT PF17283.2 gi|14521100|ref|NP_126575.1| - 0.035 14.0 1.7 2.7 8.0 0.0 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain PHD_4 PF16866.5 gi|14521100|ref|NP_126575.1| - 0.053 13.6 3.1 0.19 11.8 3.1 1.8 1 1 0 1 1 1 0 PHD-finger RbpA PF13397.6 gi|14521100|ref|NP_126575.1| - 0.056 14.1 0.5 3.7 8.2 0.1 2.0 1 1 1 2 2 2 0 RNA polymerase-binding protein HypA PF01155.19 gi|14521100|ref|NP_126575.1| - 0.066 13.2 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADK_lid PF05191.14 gi|14521100|ref|NP_126575.1| - 0.075 13.0 2.1 0.66 10.0 2.1 2.0 1 1 0 1 1 1 0 Adenylate kinase, active site lid Zn-ribbon_8 PF09723.10 gi|14521100|ref|NP_126575.1| - 0.086 13.0 1.4 0.49 10.6 1.4 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-MIZ PF02891.20 gi|14521100|ref|NP_126575.1| - 0.13 12.0 3.1 1.8 8.4 0.2 2.1 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger TF_Zn_Ribbon PF08271.12 gi|14521100|ref|NP_126575.1| - 0.13 11.8 4.8 3 7.4 0.5 2.4 1 1 0 2 2 2 0 TFIIB zinc-binding Prok-RING_1 PF14446.6 gi|14521100|ref|NP_126575.1| - 0.13 12.2 2.7 1.4 8.9 2.7 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-NADH-PPase PF09297.11 gi|14521100|ref|NP_126575.1| - 0.13 11.9 0.6 8.3 6.2 0.4 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain RecR PF02132.15 gi|14521100|ref|NP_126575.1| - 0.16 11.5 1.6 0.36 10.4 1.6 1.6 1 1 0 1 1 1 0 RecR protein zf-C2H2_4 PF13894.6 gi|14521100|ref|NP_126575.1| - 0.22 12.5 1.2 27 5.9 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Rubredoxin_2 PF18073.1 gi|14521100|ref|NP_126575.1| - 0.31 10.8 4.2 4.3 7.2 0.2 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF4379 PF14311.6 gi|14521100|ref|NP_126575.1| - 0.37 11.2 2.9 11 6.5 3.4 2.1 1 1 1 2 2 2 0 Probable Zinc-ribbon domain Desulfoferrodox PF01880.18 gi|14521101|ref|NP_126576.1| - 2.9e-33 114.3 0.1 3.3e-33 114.1 0.1 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin SoxY PF13501.6 gi|14521101|ref|NP_126576.1| - 0.011 15.9 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 Sulfur oxidation protein SoxY Methyltransf_25 PF13649.6 gi|14521102|ref|NP_126577.1| - 1.9e-25 89.4 0.0 6.7e-25 87.6 0.0 1.9 2 1 1 3 3 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521102|ref|NP_126577.1| - 1.8e-20 73.4 0.0 4.8e-20 72.0 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14521102|ref|NP_126577.1| - 2.1e-19 69.8 0.0 2.8e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521102|ref|NP_126577.1| - 1.8e-16 60.2 0.0 2.8e-16 59.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|14521102|ref|NP_126577.1| - 8.1e-13 49.0 0.0 1.6e-12 48.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521102|ref|NP_126577.1| - 7.4e-11 42.2 0.0 1.4e-10 41.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|14521102|ref|NP_126577.1| - 1.5e-08 34.4 0.0 2.3e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|14521102|ref|NP_126577.1| - 1.1e-07 31.4 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.6 gi|14521102|ref|NP_126577.1| - 0.00024 21.1 0.0 0.00031 20.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|14521102|ref|NP_126577.1| - 0.00055 19.1 0.0 0.001 18.2 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CheR PF01739.18 gi|14521102|ref|NP_126577.1| - 0.00086 18.8 0.0 0.16 11.5 0.0 2.6 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain Methyltransf_15 PF09445.10 gi|14521102|ref|NP_126577.1| - 0.0012 18.4 0.0 0.0023 17.6 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MethyltransfD12 PF02086.15 gi|14521102|ref|NP_126577.1| - 0.0015 18.3 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_2 PF00891.18 gi|14521102|ref|NP_126577.1| - 0.0023 17.3 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain FtsJ PF01728.19 gi|14521102|ref|NP_126577.1| - 0.0029 17.7 0.0 0.016 15.3 0.0 2.2 1 1 1 2 2 2 1 FtsJ-like methyltransferase N2227 PF07942.12 gi|14521102|ref|NP_126577.1| - 0.0033 16.6 0.4 0.075 12.2 0.0 2.1 1 1 0 2 2 2 1 N2227-like protein NodS PF05401.11 gi|14521102|ref|NP_126577.1| - 0.0056 16.3 0.0 0.013 15.1 0.0 1.6 2 0 0 2 2 2 1 Nodulation protein S (NodS) UPF0020 PF01170.18 gi|14521102|ref|NP_126577.1| - 0.0063 16.2 0.1 0.061 13.0 0.1 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_4 PF02390.17 gi|14521102|ref|NP_126577.1| - 0.0073 15.8 0.0 0.032 13.7 0.0 2.0 3 0 0 3 3 3 1 Putative methyltransferase TPMT PF05724.11 gi|14521102|ref|NP_126577.1| - 0.011 15.4 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Cons_hypoth95 PF03602.15 gi|14521102|ref|NP_126577.1| - 0.024 14.3 0.0 0.05 13.2 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|14521102|ref|NP_126577.1| - 0.05 13.5 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Gp138_N PF18352.1 gi|14521102|ref|NP_126577.1| - 0.099 12.7 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Phage protein Gp138 N-terminal domain HEPN PF05168.14 gi|14521103|ref|NP_126578.1| - 1.9e-25 89.3 0.0 2e-25 89.2 0.0 1.0 1 0 0 1 1 1 1 HEPN domain PaREP1 PF05942.11 gi|14521103|ref|NP_126578.1| - 0.00023 21.1 0.1 0.00029 20.8 0.1 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HemY_N PF07219.13 gi|14521103|ref|NP_126578.1| - 0.015 15.5 0.4 0.021 15.0 0.4 1.2 1 0 0 1 1 1 0 HemY protein N-terminus HEM4 PF02602.15 gi|14521103|ref|NP_126578.1| - 0.05 12.9 0.0 0.058 12.7 0.0 1.1 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD AAA_14 PF13173.6 gi|14521104|ref|NP_126579.1| - 1.6e-23 83.2 0.0 2.5e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|14521104|ref|NP_126579.1| - 7.7e-05 22.8 0.1 0.00012 22.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|14521104|ref|NP_126579.1| - 0.014 15.3 0.0 0.067 13.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA PF00004.29 gi|14521104|ref|NP_126579.1| - 0.09 13.2 0.0 1 9.8 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Methyltransf_11 PF08241.12 gi|14521105|ref|NP_126580.1| - 7.5e-26 90.6 0.0 1.1e-25 90.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521105|ref|NP_126580.1| - 1.1e-23 83.8 0.0 1.6e-23 83.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521105|ref|NP_126580.1| - 9.9e-20 71.0 0.0 1.2e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14521105|ref|NP_126580.1| - 9.6e-18 64.4 0.0 1.1e-17 64.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521105|ref|NP_126580.1| - 2.4e-16 59.8 0.0 3e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|14521105|ref|NP_126580.1| - 2.4e-15 57.0 0.0 3.5e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|14521105|ref|NP_126580.1| - 1.7e-05 24.5 0.0 2.7e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW UPF0020 PF01170.18 gi|14521105|ref|NP_126580.1| - 0.038 13.7 0.0 0.066 12.9 0.0 1.5 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 ATPgrasp_N PF18130.1 gi|14521105|ref|NP_126580.1| - 0.039 14.5 0.0 0.089 13.4 0.0 1.5 2 0 0 2 2 1 0 ATP-grasp N-terminal domain CMAS PF02353.20 gi|14521105|ref|NP_126580.1| - 0.042 13.1 0.0 0.055 12.8 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_17 PF12692.7 gi|14521105|ref|NP_126580.1| - 0.074 13.0 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase NodS PF05401.11 gi|14521105|ref|NP_126580.1| - 0.089 12.4 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 gi|14521105|ref|NP_126580.1| - 0.19 10.2 0.0 0.23 10.0 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase MTS PF05175.14 gi|14521105|ref|NP_126580.1| - 0.22 11.1 0.0 0.29 10.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain TPR_14 PF13428.6 gi|14521106|ref|NP_126581.1| - 0.074 13.9 0.5 21 6.3 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-CCHC_6 PF15288.6 gi|14521106|ref|NP_126581.1| - 0.076 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Zinc knuckle USP8_dimer PF08969.11 gi|14521106|ref|NP_126581.1| - 0.093 12.9 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 USP8 dimerisation domain Nitroreductase PF00881.24 gi|14521107|ref|NP_126582.1| - 7.1e-36 123.8 0.0 8.1e-36 123.6 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|14521107|ref|NP_126582.1| - 1.7e-07 31.0 0.0 0.0058 16.2 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase PspC PF04024.12 gi|14521108|ref|NP_126583.1| - 1.1e-18 66.8 1.0 1.1e-18 66.8 1.0 2.0 2 1 0 2 2 2 1 PspC domain BCD PF15461.6 gi|14521108|ref|NP_126583.1| - 0.025 14.1 0.5 0.025 14.1 0.5 1.7 2 0 0 2 2 2 0 Beta-carotene 15,15'-dioxygenase DUF373 PF04123.13 gi|14521108|ref|NP_126583.1| - 0.029 13.8 0.5 0.029 13.8 0.5 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF373) MRP-S27 PF10037.9 gi|14521108|ref|NP_126583.1| - 0.2 10.5 0.0 0.21 10.4 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 SPW PF03779.14 gi|14521108|ref|NP_126583.1| - 2 8.1 5.3 15 5.3 0.2 2.5 2 0 0 2 2 2 0 SPW repeat Lactamase_B PF00753.27 gi|14521109|ref|NP_126584.1| - 1.4e-08 35.0 0.0 1.9e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14521109|ref|NP_126584.1| - 6.6e-07 29.0 0.0 1.1e-06 28.3 0.0 1.5 2 0 0 2 2 2 1 Beta-lactamase superfamily domain BAF PF02961.14 gi|14521109|ref|NP_126584.1| - 0.069 13.6 0.0 0.16 12.4 0.0 1.6 2 0 0 2 2 2 0 Barrier to autointegration factor Methyltr_RsmB-F PF01189.17 gi|14521110|ref|NP_126585.1| - 1.7e-51 174.7 0.0 2.6e-51 174.1 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F NusB PF01029.18 gi|14521110|ref|NP_126585.1| - 2.9e-17 63.2 0.9 5e-17 62.4 0.9 1.4 1 0 0 1 1 1 1 NusB family Methyltransf_31 PF13847.6 gi|14521110|ref|NP_126585.1| - 1.2e-13 51.1 0.0 1.6e-12 47.5 0.0 2.5 3 0 0 3 3 3 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521110|ref|NP_126585.1| - 2.3e-08 33.7 0.0 1.1e-07 31.4 0.0 2.1 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|14521110|ref|NP_126585.1| - 1.9e-07 31.0 0.0 4.4e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|14521110|ref|NP_126585.1| - 9.9e-07 29.4 0.0 7.5e-06 26.6 0.0 2.6 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|14521110|ref|NP_126585.1| - 1.2e-05 25.0 0.0 0.0014 18.2 0.0 3.2 2 1 0 2 2 2 1 Methyltransferase small domain FtsJ PF01728.19 gi|14521110|ref|NP_126585.1| - 7.1e-05 23.0 0.0 0.00022 21.4 0.0 1.8 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmF_N PF17125.5 gi|14521110|ref|NP_126585.1| - 0.0012 19.3 0.0 0.004 17.6 0.0 1.9 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_4 PF02390.17 gi|14521110|ref|NP_126585.1| - 0.0084 15.6 0.0 0.024 14.1 0.0 1.8 1 1 0 1 1 1 1 Putative methyltransferase Fibrillarin PF01269.17 gi|14521110|ref|NP_126585.1| - 0.012 14.7 0.0 0.097 11.8 0.0 2.3 2 1 1 3 3 3 0 Fibrillarin Methyltransf_12 PF08242.12 gi|14521110|ref|NP_126585.1| - 0.061 14.1 0.1 0.3 11.8 0.0 2.3 2 1 0 2 2 2 0 Methyltransferase domain Cys_Met_Meta_PP PF01053.20 gi|14521111|ref|NP_126586.1| - 1.9e-109 365.7 0.0 2.3e-109 365.5 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|14521111|ref|NP_126586.1| - 6.9e-08 31.8 0.0 1e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|14521111|ref|NP_126586.1| - 1.1e-06 28.1 0.0 1.5e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|14521111|ref|NP_126586.1| - 1.5e-06 27.8 0.0 2.3e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|14521111|ref|NP_126586.1| - 0.0052 16.1 0.0 0.018 14.4 0.0 1.8 2 0 0 2 2 2 1 Beta-eliminating lyase PALP PF00291.25 gi|14521111|ref|NP_126586.1| - 0.07 12.5 0.0 2.6 7.4 0.0 2.2 2 0 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme MTHFR_C PF12225.8 gi|14521112|ref|NP_126587.1| - 9.6e-10 38.0 0.0 1.6e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal MTHFR PF02219.17 gi|14521112|ref|NP_126587.1| - 0.0003 20.2 0.0 0.00059 19.3 0.0 1.5 1 1 0 1 1 1 1 Methylenetetrahydrofolate reductase Meth_synt_1 PF08267.12 gi|14521113|ref|NP_126588.1| - 1.1e-14 54.7 0.2 9.3e-12 45.1 0.2 2.1 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|14521113|ref|NP_126588.1| - 2.2e-11 43.6 0.0 5.6e-10 39.0 0.0 2.0 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain DUF166 PF02593.14 gi|14521113|ref|NP_126588.1| - 0.0082 15.7 0.2 0.066 12.8 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function DUF4874 PF16173.5 gi|14521113|ref|NP_126588.1| - 0.0085 15.8 0.3 2.2 7.9 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4874) Meth_synt_2 PF01717.18 gi|14521114|ref|NP_126589.1| - 1.3e-55 189.0 0.0 1.9e-55 188.4 0.0 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|14521114|ref|NP_126589.1| - 6.8e-09 35.7 0.1 1.1e-08 35.0 0.1 1.3 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain DUF3095 PF11294.8 gi|14521115|ref|NP_126590.1| - 0.059 12.4 0.0 0.083 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3095) SSF PF00474.17 gi|14521116|ref|NP_126591.1| - 8.1e-66 222.6 21.6 1.1e-65 222.0 21.6 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Homoserine_dh PF00742.19 gi|14521117|ref|NP_126592.1| - 2.2e-35 122.1 0.0 5.4e-35 120.9 0.0 1.7 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|14521117|ref|NP_126592.1| - 2.2e-15 57.3 0.0 8e-15 55.5 0.0 1.9 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|14521117|ref|NP_126592.1| - 0.0012 18.9 0.1 0.005 17.0 0.1 2.1 2 1 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Peripla_BP_2 PF01497.18 gi|14521117|ref|NP_126592.1| - 0.0015 18.1 0.1 0.0041 16.7 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein Sacchrp_dh_NADP PF03435.18 gi|14521117|ref|NP_126592.1| - 0.0081 16.4 0.1 0.04 14.2 0.1 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ELFV_dehydrog PF00208.21 gi|14521117|ref|NP_126592.1| - 0.012 15.4 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Gp_dh_N PF00044.24 gi|14521117|ref|NP_126592.1| - 0.076 13.4 0.2 0.26 11.7 0.2 1.9 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_kinase PF01513.21 gi|14521118|ref|NP_126593.1| - 3.6e-69 233.2 0.0 5.1e-69 232.7 0.0 1.2 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|14521118|ref|NP_126593.1| - 0.0025 17.4 0.0 0.004 16.8 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain PIN_3 PF13470.6 gi|14521119|ref|NP_126594.1| - 0.0015 19.3 0.0 0.0018 19.0 0.0 1.2 1 0 0 1 1 1 1 PIN domain RHH_8 PF17723.1 gi|14521120|ref|NP_126595.1| - 0.013 15.7 0.1 0.026 14.7 0.0 1.5 2 0 0 2 2 2 0 Ribbon-Helix-Helix transcriptional regulator family DUF5388 PF17363.2 gi|14521120|ref|NP_126595.1| - 0.06 13.6 0.0 0.13 12.5 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5388) MMR_HSR1_C PF08438.10 gi|14521120|ref|NP_126595.1| - 0.064 13.8 0.0 0.44 11.1 0.0 1.9 2 0 0 2 2 2 0 GTPase of unknown function C-terminal DUF3267 PF11667.8 gi|14521121|ref|NP_126596.1| - 1.4e-16 60.7 2.8 1.4e-16 60.7 2.8 1.8 2 0 0 2 2 2 1 Putative zincin peptidase Insulin_TMD PF17870.1 gi|14521121|ref|NP_126596.1| - 0.29 11.2 11.2 0.87 9.7 1.1 3.3 3 0 0 3 3 3 0 Insulin receptor trans-membrane segment polyprenyl_synt PF00348.17 gi|14521122|ref|NP_126597.1| - 8.7e-72 241.2 0.0 1.2e-71 240.8 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase V-SNARE_C PF12352.8 gi|14521122|ref|NP_126597.1| - 0.14 12.5 0.0 0.32 11.3 0.0 1.6 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus RMMBL PF07521.12 gi|14521123|ref|NP_126598.1| - 6.2e-14 51.7 2.8 1.4e-13 50.5 0.1 2.8 3 0 0 3 3 3 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|14521123|ref|NP_126598.1| - 2.2e-12 47.4 0.4 3.6e-12 46.7 0.1 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14521123|ref|NP_126598.1| - 4.1e-08 33.0 0.0 8e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain FmdA_AmdA PF03069.15 gi|14521124|ref|NP_126599.1| - 2.9e-37 128.4 2.0 4.8e-21 75.0 0.5 2.8 1 1 1 2 2 2 2 Acetamidase/Formamidase family TYW3 PF02676.14 gi|14521125|ref|NP_126600.1| - 2.7e-45 154.4 0.0 3.5e-45 154.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TYW3 Rubrerythrin PF02915.17 gi|14521126|ref|NP_126601.1| - 1.7e-35 122.4 5.0 2e-35 122.1 5.0 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|14521126|ref|NP_126601.1| - 0.0015 18.5 3.0 0.52 10.2 0.1 2.3 2 1 0 2 2 2 2 Ferritin-like domain Ferritin_2 PF13668.6 gi|14521126|ref|NP_126601.1| - 0.0024 18.1 0.2 1.2 9.3 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain tRNA-synt_1c_C PF03950.18 gi|14521126|ref|NP_126601.1| - 0.043 13.7 0.2 0.79 9.6 0.1 2.0 1 1 1 2 2 2 0 tRNA synthetases class I (E and Q), anti-codon binding domain DUF3969 PF13108.6 gi|14521126|ref|NP_126601.1| - 0.07 13.2 0.7 0.12 12.3 0.1 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3969) tRNA-synt_1 PF00133.22 gi|14521127|ref|NP_126602.1| - 1.7e-188 627.7 10.2 2.5e-188 627.1 10.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|14521127|ref|NP_126602.1| - 8e-38 129.8 0.4 2.1e-37 128.4 0.4 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|14521127|ref|NP_126602.1| - 9.8e-28 97.0 5.1 9e-10 37.8 0.4 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|14521127|ref|NP_126602.1| - 1.6e-07 31.0 0.1 5.7e-05 22.6 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|14521127|ref|NP_126602.1| - 3.7e-06 26.1 0.0 0.00036 19.6 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1_2 PF13603.6 gi|14521127|ref|NP_126602.1| - 2.3e-05 24.0 0.1 0.00013 21.5 0.0 2.2 3 0 0 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 DctQ PF04290.12 gi|14521129|ref|NP_126604.1| - 1.7 8.6 10.9 0.051 13.5 2.9 2.4 2 1 1 3 3 3 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF835 PF05763.12 gi|14521130|ref|NP_126605.1| - 8.2e-28 96.8 0.0 2e-27 95.6 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF835) Cytochrom_C_asm PF01578.20 gi|14521130|ref|NP_126605.1| - 0.025 14.4 2.1 0.025 14.4 2.1 1.5 2 0 0 2 2 2 0 Cytochrome C assembly protein 7TMR-DISM_7TM PF07695.11 gi|14521130|ref|NP_126605.1| - 0.054 13.4 6.6 0.087 12.7 6.6 1.4 1 0 0 1 1 1 0 7TM diverse intracellular signalling PsaF PF17550.2 gi|14521130|ref|NP_126605.1| - 0.083 12.4 0.2 0.2 11.2 0.0 1.6 1 1 0 1 1 1 0 Family of unknown function HTH_34 PF13601.6 gi|14521132|ref|NP_126607.1| - 4.1e-17 62.1 0.2 5.1e-17 61.8 0.2 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|14521132|ref|NP_126607.1| - 2.5e-10 40.2 0.0 5.6e-10 39.1 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521132|ref|NP_126607.1| - 2.5e-08 33.6 0.0 1.9e-07 30.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|14521132|ref|NP_126607.1| - 0.0003 20.7 0.0 0.00044 20.1 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|14521132|ref|NP_126607.1| - 0.0003 20.3 0.0 0.00059 19.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|14521132|ref|NP_126607.1| - 0.0022 17.8 0.0 0.0042 16.9 0.0 1.4 1 1 1 2 2 2 1 MarR family HxlR PF01638.17 gi|14521132|ref|NP_126607.1| - 0.0036 17.1 0.3 0.005 16.7 0.2 1.3 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|14521132|ref|NP_126607.1| - 0.013 15.5 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix dsDNA_bind PF01984.20 gi|14521133|ref|NP_126608.1| - 7.3e-27 93.8 16.0 8.6e-27 93.6 16.0 1.1 1 0 0 1 1 1 1 Double-stranded DNA-binding domain TIR-like PF10137.9 gi|14521134|ref|NP_126609.1| - 0.046 13.7 0.0 0.35 10.8 0.0 2.1 2 0 0 2 2 2 0 Predicted nucleotide-binding protein containing TIR-like domain BatA PF07584.11 gi|14521134|ref|NP_126609.1| - 0.13 12.7 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal DUF371 PF04027.13 gi|14521136|ref|NP_126611.1| - 1e-49 167.9 3.3 1.2e-49 167.7 3.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) DUF4342 PF14242.6 gi|14521136|ref|NP_126611.1| - 0.0037 17.2 0.6 0.011 15.7 0.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4342) Rubrerythrin PF02915.17 gi|14521137|ref|NP_126612.1| - 2.9e-15 56.9 18.6 3.3e-15 56.7 18.6 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 gi|14521137|ref|NP_126612.1| - 7.3e-05 23.0 7.1 0.0024 18.1 7.1 2.1 1 1 0 1 1 1 1 Ferritin-like domain DUF2383 PF09537.10 gi|14521137|ref|NP_126612.1| - 0.00042 20.6 3.6 0.011 16.1 0.2 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF2383) MiaE PF06175.11 gi|14521137|ref|NP_126612.1| - 0.018 14.7 3.6 0.022 14.3 0.4 2.0 1 1 1 2 2 2 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) Coat_F PF07875.12 gi|14521137|ref|NP_126612.1| - 0.034 14.4 0.2 10 6.5 0.0 2.2 2 0 0 2 2 2 0 Coat F domain FAD_binding_1 PF00667.20 gi|14521137|ref|NP_126612.1| - 0.062 12.9 6.4 1.1 8.8 0.8 2.1 1 1 0 2 2 2 0 FAD binding domain DUF3231 PF11553.8 gi|14521137|ref|NP_126612.1| - 0.71 9.5 4.6 0.75 9.4 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3231) TrmO PF01980.16 gi|14521138|ref|NP_126613.1| - 1.2e-24 86.8 0.0 2e-24 86.1 0.0 1.3 1 0 0 1 1 1 1 tRNA-methyltransferase O Head_binding PF09008.10 gi|14521138|ref|NP_126613.1| - 0.17 12.2 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 Head binding HTH_5 PF01022.20 gi|14521139|ref|NP_126614.1| - 6.3e-18 64.4 0.1 1.3e-17 63.4 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14521139|ref|NP_126614.1| - 2.4e-09 37.1 0.0 5.1e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|14521139|ref|NP_126614.1| - 7.5e-06 25.4 1.0 1.6e-05 24.4 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|14521139|ref|NP_126614.1| - 5.4e-05 23.3 0.1 9.1e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|14521139|ref|NP_126614.1| - 0.00027 20.7 0.8 0.00046 20.0 0.1 1.7 2 1 0 2 2 2 1 TFIIE alpha subunit MarR_2 PF12802.7 gi|14521139|ref|NP_126614.1| - 0.014 15.2 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 MarR family ER PF01133.17 gi|14521139|ref|NP_126614.1| - 0.026 14.5 0.0 0.052 13.6 0.0 1.7 1 1 0 1 1 1 0 Enhancer of rudimentary TrmB PF01978.19 gi|14521139|ref|NP_126614.1| - 0.05 13.5 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.11 gi|14521139|ref|NP_126614.1| - 0.053 13.6 0.1 0.12 12.5 0.1 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain E1-E2_ATPase PF00122.20 gi|14521140|ref|NP_126615.1| - 1.5e-55 187.5 0.8 1.5e-55 187.5 0.8 2.1 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|14521140|ref|NP_126615.1| - 6.4e-41 141.0 3.0 1.5e-40 139.8 3.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|14521140|ref|NP_126615.1| - 8.2e-09 35.8 0.7 8.2e-09 35.8 0.7 4.0 6 0 0 6 6 6 1 Heavy-metal-associated domain HAD PF12710.7 gi|14521140|ref|NP_126615.1| - 0.00012 22.5 0.1 0.00047 20.6 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|14521140|ref|NP_126615.1| - 0.00012 21.9 1.2 0.005 16.6 0.3 2.8 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Flavodoxin_1 PF00258.25 gi|14521140|ref|NP_126615.1| - 0.18 12.0 0.3 2.3 8.4 0.0 2.6 2 0 0 2 2 2 0 Flavodoxin Glyco_hydro_1 PF00232.18 gi|14521142|ref|NP_126617.1| - 7.8e-71 238.8 5.4 6.5e-58 196.2 0.7 3.0 2 1 0 2 2 2 2 Glycosyl hydrolase family 1 CopG_antitoxin PF12441.8 gi|14521142|ref|NP_126617.1| - 0.15 12.6 0.1 0.31 11.6 0.1 1.5 1 0 0 1 1 1 0 CopG antitoxin of type II toxin-antitoxin system SBP_bac_5 PF00496.22 gi|14521143|ref|NP_126618.1| - 1.9e-75 254.2 15.8 3.2e-75 253.5 15.8 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SLAIN PF15301.6 gi|14521143|ref|NP_126618.1| - 0.13 11.5 2.2 0.18 11.0 2.2 1.1 1 0 0 1 1 1 0 SLAIN motif-containing family BPD_transp_1 PF00528.22 gi|14521144|ref|NP_126619.1| - 5.8e-44 150.1 12.8 5.8e-44 150.1 12.8 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|14521145|ref|NP_126620.1| - 3.9e-26 91.9 19.1 3.9e-26 91.9 19.1 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|14521145|ref|NP_126620.1| - 1.8e-07 31.0 0.3 1.8e-07 31.0 0.3 3.3 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C oligo_HPY PF08352.12 gi|14521146|ref|NP_126621.1| - 5.7e-21 74.8 0.1 1e-20 74.0 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 gi|14521146|ref|NP_126621.1| - 1.8e-20 73.9 0.0 2.5e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521146|ref|NP_126621.1| - 0.00034 20.5 1.8 0.00098 19.0 0.6 1.9 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|14521146|ref|NP_126621.1| - 0.00058 20.2 0.3 0.0022 18.3 0.3 1.8 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|14521146|ref|NP_126621.1| - 0.0056 16.6 1.4 3.5 7.5 0.0 3.0 2 1 1 3 3 3 1 NTPase AAA_29 PF13555.6 gi|14521146|ref|NP_126621.1| - 0.018 14.8 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|14521146|ref|NP_126621.1| - 0.03 14.7 0.1 0.047 14.1 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 gi|14521146|ref|NP_126621.1| - 0.034 13.6 0.3 1.5 8.2 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|14521146|ref|NP_126621.1| - 0.043 13.7 0.1 0.098 12.6 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 gi|14521146|ref|NP_126621.1| - 0.048 13.6 0.1 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 NACHT domain MeaB PF03308.16 gi|14521146|ref|NP_126621.1| - 0.06 12.3 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|14521146|ref|NP_126621.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ATP-synt_ab PF00006.25 gi|14521146|ref|NP_126621.1| - 0.17 11.5 0.0 0.3 10.7 0.0 1.6 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 gi|14521146|ref|NP_126621.1| - 0.21 12.0 0.1 0.5 10.8 0.1 1.6 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 gi|14521147|ref|NP_126622.1| - 5.2e-31 108.0 0.0 7e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14521147|ref|NP_126622.1| - 6.3e-20 71.5 0.0 1.1e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|14521147|ref|NP_126622.1| - 5.8e-07 29.9 0.3 4.4e-06 27.0 0.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521147|ref|NP_126622.1| - 0.00037 20.9 0.0 0.00064 20.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|14521147|ref|NP_126622.1| - 0.00058 19.5 0.1 0.0012 18.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|14521147|ref|NP_126622.1| - 0.0017 17.8 0.0 0.0039 16.6 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|14521147|ref|NP_126622.1| - 0.019 14.7 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 gi|14521147|ref|NP_126622.1| - 0.035 13.5 0.0 0.071 12.5 0.0 1.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 gi|14521147|ref|NP_126622.1| - 0.051 12.7 0.0 0.082 12.1 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 gi|14521147|ref|NP_126622.1| - 0.06 13.1 0.1 0.56 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|14521147|ref|NP_126622.1| - 0.062 13.8 0.0 0.082 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|14521147|ref|NP_126622.1| - 0.066 13.6 0.0 0.65 10.4 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|14521147|ref|NP_126622.1| - 0.14 11.7 0.0 1.9 8.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|14521147|ref|NP_126622.1| - 0.14 12.1 0.1 0.27 11.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 gi|14521147|ref|NP_126622.1| - 0.19 11.1 0.1 5.8 6.3 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein IstB_IS21 PF01695.17 gi|14521147|ref|NP_126622.1| - 0.22 11.2 0.4 10 5.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_21 PF13304.6 gi|14521147|ref|NP_126622.1| - 0.48 10.2 2.5 0.64 9.8 0.3 1.9 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system ATPase PF06745.13 gi|14521147|ref|NP_126622.1| - 0.49 9.7 1.9 0.66 9.3 0.3 2.0 3 0 0 3 3 3 0 KaiC Cellulase PF00150.18 gi|14521148|ref|NP_126623.1| - 3e-56 190.9 1.0 4e-56 190.5 0.2 1.5 2 0 0 2 2 2 1 Cellulase (glycosyl hydrolase family 5) AAA_14 PF13173.6 gi|14521149|ref|NP_126624.1| - 8.1e-23 80.9 0.0 1.8e-22 79.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521149|ref|NP_126624.1| - 3.9e-05 24.1 0.1 0.00065 20.1 0.0 2.5 2 1 1 3 3 3 1 AAA ATPase domain ATPase_2 PF01637.18 gi|14521149|ref|NP_126624.1| - 0.00018 21.5 0.6 0.041 13.8 0.1 2.6 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea MarR_2 PF12802.7 gi|14521149|ref|NP_126624.1| - 0.00055 19.8 0.2 0.0018 18.1 0.0 1.9 2 0 0 2 2 2 1 MarR family DAP3 PF10236.9 gi|14521149|ref|NP_126624.1| - 0.0011 18.2 0.0 0.0018 17.5 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 HTH_23 PF13384.6 gi|14521149|ref|NP_126624.1| - 0.0011 18.7 0.0 0.0041 16.9 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain DUF815 PF05673.13 gi|14521149|ref|NP_126624.1| - 0.0019 17.4 0.0 0.0033 16.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) SRP54 PF00448.22 gi|14521149|ref|NP_126624.1| - 0.016 14.8 0.0 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain HTH_24 PF13412.6 gi|14521149|ref|NP_126624.1| - 0.022 14.3 0.1 0.12 12.0 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding AAA PF00004.29 gi|14521149|ref|NP_126624.1| - 0.03 14.7 0.0 0.071 13.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|14521149|ref|NP_126624.1| - 0.03 13.5 0.1 2.4 7.3 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain HTH_IclR PF09339.10 gi|14521149|ref|NP_126624.1| - 0.036 13.9 0.0 0.072 12.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_10 PF04967.12 gi|14521149|ref|NP_126624.1| - 0.063 13.1 0.0 0.2 11.5 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_27 PF13463.6 gi|14521149|ref|NP_126624.1| - 0.064 13.8 0.0 0.32 11.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|14521149|ref|NP_126624.1| - 0.085 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator Fe_dep_repress PF01325.19 gi|14521149|ref|NP_126624.1| - 0.095 12.9 2.4 0.19 12.0 0.0 2.8 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.6 gi|14521149|ref|NP_126624.1| - 0.12 12.4 0.0 0.41 10.6 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|14521149|ref|NP_126624.1| - 0.13 12.3 0.7 0.77 9.8 0.0 2.5 3 0 0 3 3 3 0 HTH domain PIF1 PF05970.14 gi|14521149|ref|NP_126624.1| - 0.21 10.7 0.0 0.37 9.9 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase ATPase_2 PF01637.18 gi|14521150|ref|NP_126625.1| - 3.1e-68 230.2 0.5 4.7e-68 229.6 0.5 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|14521150|ref|NP_126625.1| - 1.1e-09 38.9 0.0 2.2e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|14521150|ref|NP_126625.1| - 4.2e-07 30.1 0.6 0.0028 17.7 0.0 2.6 2 1 1 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|14521150|ref|NP_126625.1| - 5.8e-07 29.9 0.0 4e-06 27.1 0.0 2.2 2 1 0 2 2 2 1 AAA domain CNP_C_terminal PF17839.1 gi|14521150|ref|NP_126625.1| - 0.0022 18.7 0.0 0.0046 17.7 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of cyclic nucleotide phosphodiesterase TniB PF05621.11 gi|14521150|ref|NP_126625.1| - 0.007 15.8 0.0 1.1 8.7 0.0 2.3 2 0 0 2 2 2 2 Bacterial TniB protein AAA PF00004.29 gi|14521150|ref|NP_126625.1| - 0.019 15.4 0.0 0.2 12.1 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_binding PF01877.17 gi|14521150|ref|NP_126625.1| - 0.037 14.3 0.3 0.23 11.7 0.1 2.2 2 0 0 2 2 2 0 RNA binding TK PF00265.18 gi|14521150|ref|NP_126625.1| - 0.13 12.1 0.2 0.94 9.3 0.0 2.2 2 0 0 2 2 2 0 Thymidine kinase AAA_7 PF12775.7 gi|14521150|ref|NP_126625.1| - 0.15 11.5 0.0 0.4 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region Pyr_redox_2 PF07992.14 gi|14521152|ref|NP_126627.1| - 7.4e-43 146.9 0.1 1.1e-42 146.3 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 gi|14521152|ref|NP_126627.1| - 3.4e-40 136.4 0.1 1.2e-39 134.6 0.1 1.8 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_3 PF13738.6 gi|14521152|ref|NP_126627.1| - 5.3e-17 62.0 1.2 1.1e-10 41.2 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14521152|ref|NP_126627.1| - 4.3e-15 56.0 5.6 3.4e-07 30.7 0.1 3.4 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|14521152|ref|NP_126627.1| - 4.7e-11 42.8 0.0 1e-09 38.5 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|14521152|ref|NP_126627.1| - 3.8e-09 36.2 0.0 0.001 18.4 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 gi|14521152|ref|NP_126627.1| - 1.2e-08 34.1 0.8 1.7e-06 27.0 0.3 2.3 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|14521152|ref|NP_126627.1| - 3.3e-08 33.0 0.2 4.4e-05 22.7 0.1 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 gi|14521152|ref|NP_126627.1| - 3.9e-07 29.5 0.5 1.8e-06 27.4 0.1 1.9 2 0 0 2 2 2 1 Thi4 family 2-Hacid_dh_C PF02826.19 gi|14521152|ref|NP_126627.1| - 4e-07 29.6 0.1 0.026 13.9 0.0 2.3 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_oxidored PF12831.7 gi|14521152|ref|NP_126627.1| - 9.1e-07 28.6 0.8 0.00068 19.1 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|14521152|ref|NP_126627.1| - 2.1e-06 28.1 0.4 0.03 14.8 0.0 2.6 2 1 0 2 2 2 2 Putative NAD(P)-binding FMO-like PF00743.19 gi|14521152|ref|NP_126627.1| - 2.4e-06 26.3 0.0 0.0032 15.9 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like FAD_binding_3 PF01494.19 gi|14521152|ref|NP_126627.1| - 3e-06 26.7 0.2 0.00021 20.7 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|14521152|ref|NP_126627.1| - 3.5e-06 26.4 4.1 2.3e-05 23.7 0.8 2.8 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.24 gi|14521152|ref|NP_126627.1| - 1.5e-05 24.8 2.1 0.00011 21.9 0.8 2.8 4 0 0 4 4 3 1 FAD dependent oxidoreductase Shikimate_DH PF01488.20 gi|14521152|ref|NP_126627.1| - 1.7e-05 24.9 0.6 0.78 9.8 0.1 3.4 3 0 0 3 3 3 2 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 gi|14521152|ref|NP_126627.1| - 2.7e-05 24.1 0.3 0.051 13.5 0.0 2.3 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PALP PF00291.25 gi|14521152|ref|NP_126627.1| - 3.3e-05 23.5 0.0 0.099 12.0 0.0 2.6 2 1 0 2 2 2 2 Pyridoxal-phosphate dependent enzyme F420_oxidored PF03807.17 gi|14521152|ref|NP_126627.1| - 9.2e-05 23.0 0.1 0.083 13.5 0.0 3.0 3 0 0 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent Amino_oxidase PF01593.24 gi|14521152|ref|NP_126627.1| - 0.00018 20.9 1.0 0.0024 17.2 0.0 2.5 2 1 1 3 3 3 1 Flavin containing amine oxidoreductase XdhC_C PF13478.6 gi|14521152|ref|NP_126627.1| - 0.0016 18.9 0.0 1.3 9.5 0.0 2.5 2 0 0 2 2 2 1 XdhC Rossmann domain Lycopene_cycl PF05834.12 gi|14521152|ref|NP_126627.1| - 0.0023 17.0 0.2 0.0041 16.2 0.2 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein IlvN PF07991.12 gi|14521152|ref|NP_126627.1| - 0.0026 17.4 0.0 1.2 8.7 0.0 2.3 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_9 PF13454.6 gi|14521152|ref|NP_126627.1| - 0.011 15.7 1.5 0.018 15.1 0.1 2.0 2 0 0 2 2 2 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|14521152|ref|NP_126627.1| - 0.016 14.4 0.0 1.4 8.0 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) UDPG_MGDP_dh_N PF03721.14 gi|14521152|ref|NP_126627.1| - 0.018 14.7 0.1 0.12 11.9 0.0 2.4 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YjeF_N PF03853.15 gi|14521152|ref|NP_126627.1| - 0.022 14.6 0.0 0.94 9.3 0.0 2.4 2 0 0 2 2 2 0 YjeF-related protein N-terminus Oxidored_nitro PF00148.19 gi|14521152|ref|NP_126627.1| - 0.036 12.8 0.1 0.65 8.7 0.0 2.2 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase AdoHcyase_NAD PF00670.21 gi|14521152|ref|NP_126627.1| - 0.04 14.0 0.0 1.2 9.2 0.0 2.5 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 gi|14521152|ref|NP_126627.1| - 0.047 13.9 0.1 2.5 8.2 0.0 2.4 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.18 gi|14521152|ref|NP_126627.1| - 0.06 13.6 0.0 3.5 7.9 0.0 2.9 2 0 0 2 2 2 0 TrkA-N domain ApbA PF02558.16 gi|14521152|ref|NP_126627.1| - 0.12 12.1 1.1 0.62 9.7 0.2 2.6 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA Glyco_transf_4 PF13439.6 gi|14521152|ref|NP_126627.1| - 0.14 12.1 0.0 9.4 6.2 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DHODB_Fe-S_bind PF10418.9 gi|14521153|ref|NP_126628.1| - 6.1e-13 48.3 2.9 1.1e-12 47.6 2.9 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|14521153|ref|NP_126628.1| - 0.00063 20.4 0.0 0.0013 19.3 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|14521153|ref|NP_126628.1| - 0.013 15.8 0.0 0.026 14.9 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain Glyco_transf_4 PF13439.6 gi|14521153|ref|NP_126628.1| - 0.014 15.4 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NAD_binding_6 PF08030.12 gi|14521153|ref|NP_126628.1| - 0.17 12.0 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer2_3 PF13085.6 gi|14521153|ref|NP_126628.1| - 0.22 11.5 0.1 0.41 10.7 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer4_22 PF17179.4 gi|14521154|ref|NP_126629.1| - 2.4e-24 86.0 13.5 5e-24 85.0 13.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14521154|ref|NP_126629.1| - 4.1e-06 26.9 14.4 0.0048 17.0 15.4 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521154|ref|NP_126629.1| - 5.8e-06 26.3 17.1 0.0016 18.5 0.5 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521154|ref|NP_126629.1| - 2e-05 24.4 10.7 0.00011 22.1 1.8 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521154|ref|NP_126629.1| - 2.3e-05 24.9 15.8 0.0015 19.1 1.4 2.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521154|ref|NP_126629.1| - 2.6e-05 24.6 13.2 0.0037 17.7 14.9 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14521154|ref|NP_126629.1| - 0.00014 21.9 14.6 0.018 15.1 5.7 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|14521154|ref|NP_126629.1| - 0.00015 21.4 26.3 0.00023 20.9 2.6 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14521154|ref|NP_126629.1| - 0.0012 18.8 3.8 0.0012 18.8 3.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14521154|ref|NP_126629.1| - 0.0018 19.2 15.9 0.046 14.7 1.7 3.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|14521154|ref|NP_126629.1| - 0.0026 18.2 17.2 0.1 13.2 2.7 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14521154|ref|NP_126629.1| - 0.031 14.8 22.3 0.96 10.1 4.2 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|14521154|ref|NP_126629.1| - 0.13 13.3 23.4 0.24 12.4 4.4 3.6 2 1 1 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|14521154|ref|NP_126629.1| - 0.28 11.4 9.2 1.7 8.8 0.6 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain NAD_binding_1 PF00175.21 gi|14521155|ref|NP_126630.1| - 8.3e-14 52.2 0.0 1.4e-13 51.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.9 gi|14521155|ref|NP_126630.1| - 1.3e-12 47.3 1.5 3e-12 46.1 1.5 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.24 gi|14521155|ref|NP_126630.1| - 0.00043 20.6 0.0 0.00077 19.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain FAD_binding_8 PF08022.12 gi|14521155|ref|NP_126630.1| - 0.0078 16.3 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 FAD-binding domain NAD_binding_6 PF08030.12 gi|14521155|ref|NP_126630.1| - 0.029 14.5 0.0 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 Ferric reductase NAD binding domain Oxidored_q6 PF01058.22 gi|14521156|ref|NP_126631.1| - 5.5e-27 94.2 0.0 8.4e-27 93.6 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFeSe_Hases PF00374.19 gi|14521157|ref|NP_126632.1| - 1.2e-36 126.7 0.1 5.2e-20 71.8 0.0 2.3 1 1 0 2 2 2 2 Nickel-dependent hydrogenase EST1 PF10374.9 gi|14521157|ref|NP_126632.1| - 0.032 14.9 0.0 0.051 14.2 0.0 1.4 1 0 0 1 1 1 0 Telomerase activating protein Est1 Methyltransf_25 PF13649.6 gi|14521158|ref|NP_126633.1| - 6e-09 36.5 0.0 1.1e-08 35.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521158|ref|NP_126633.1| - 1.2e-08 35.5 0.0 2.1e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|14521158|ref|NP_126633.1| - 2.7e-08 33.5 0.0 4.4e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Spermine_synth PF01564.17 gi|14521158|ref|NP_126633.1| - 9.1e-07 28.5 0.0 1.4e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Cons_hypoth95 PF03602.15 gi|14521158|ref|NP_126633.1| - 9.8e-07 28.6 0.0 1.5e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|14521158|ref|NP_126633.1| - 3.4e-06 26.9 0.0 4.9e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_30 PF05430.11 gi|14521158|ref|NP_126633.1| - 0.00014 21.7 0.0 0.00029 20.7 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_15 PF09445.10 gi|14521158|ref|NP_126633.1| - 0.00015 21.4 0.0 0.00022 20.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_N4_Mtase PF01555.18 gi|14521158|ref|NP_126633.1| - 0.00024 20.9 0.1 0.14 11.8 0.0 2.6 3 0 0 3 3 3 2 DNA methylase Ubie_methyltran PF01209.18 gi|14521158|ref|NP_126633.1| - 0.00049 19.5 0.0 0.00089 18.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|14521158|ref|NP_126633.1| - 0.0011 18.8 0.0 0.0038 17.1 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain SAM_MT PF04445.13 gi|14521158|ref|NP_126633.1| - 0.013 14.9 0.0 0.029 13.8 0.0 1.5 1 1 0 1 1 1 0 Putative SAM-dependent methyltransferase Methyltransf_24 PF13578.6 gi|14521158|ref|NP_126633.1| - 0.033 15.2 0.0 0.081 14.0 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain N6_Mtase PF02384.16 gi|14521158|ref|NP_126633.1| - 0.049 12.9 0.0 0.088 12.1 0.0 1.3 1 0 0 1 1 1 0 N-6 DNA Methylase Met_10 PF02475.16 gi|14521158|ref|NP_126633.1| - 0.051 13.3 0.0 0.11 12.2 0.0 1.7 2 0 0 2 2 2 0 Met-10+ like-protein UPF0020 PF01170.18 gi|14521158|ref|NP_126633.1| - 0.15 11.7 0.0 0.33 10.6 0.0 1.6 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_12 PF08242.12 gi|14521158|ref|NP_126633.1| - 0.17 12.7 0.0 0.38 11.5 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Peptidase_M19 PF01244.21 gi|14521159|ref|NP_126634.1| - 4.3e-95 318.5 0.0 4.8e-95 318.4 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) ATPase PF06745.13 gi|14521160|ref|NP_126635.1| - 1.3e-47 162.2 0.0 1.4e-47 162.0 0.0 1.0 1 0 0 1 1 1 1 KaiC DnaB_C PF03796.15 gi|14521160|ref|NP_126635.1| - 5.2e-08 32.5 0.0 1.2e-06 28.0 0.0 2.0 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|14521160|ref|NP_126635.1| - 7.5e-08 32.2 0.0 4.9e-07 29.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain GvpD PF07088.11 gi|14521160|ref|NP_126635.1| - 1.4e-07 30.5 0.1 9.2e-07 27.8 0.1 1.9 1 1 0 1 1 1 1 GvpD gas vesicle protein RecA PF00154.21 gi|14521160|ref|NP_126635.1| - 9.2e-06 25.3 0.0 1.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_24 PF13479.6 gi|14521160|ref|NP_126635.1| - 0.0007 19.4 0.2 0.0088 15.8 0.1 2.4 2 1 0 2 2 2 1 AAA domain Rad51 PF08423.11 gi|14521160|ref|NP_126635.1| - 0.00086 18.6 0.1 0.0028 16.9 0.0 1.7 2 0 0 2 2 2 1 Rad51 PAXNEB PF05625.11 gi|14521160|ref|NP_126635.1| - 0.0013 18.0 0.0 0.0055 15.9 0.0 1.8 2 0 0 2 2 2 1 PAXNEB protein DUF2075 PF09848.9 gi|14521160|ref|NP_126635.1| - 0.0016 17.7 0.0 0.0021 17.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 gi|14521160|ref|NP_126635.1| - 0.0018 18.2 0.0 0.0047 16.9 0.0 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521160|ref|NP_126635.1| - 0.0028 17.7 0.0 0.0048 16.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|14521160|ref|NP_126635.1| - 0.0039 16.9 0.0 0.0064 16.2 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.12 gi|14521160|ref|NP_126635.1| - 0.011 15.7 0.0 0.02 14.8 0.0 1.5 1 1 0 1 1 1 0 NACHT domain cobW PF02492.19 gi|14521160|ref|NP_126635.1| - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Ferritin_2 PF13668.6 gi|14521160|ref|NP_126635.1| - 0.014 15.6 0.0 0.021 15.0 0.0 1.2 1 0 0 1 1 1 0 Ferritin-like domain AAA_22 PF13401.6 gi|14521160|ref|NP_126635.1| - 0.015 15.6 0.0 0.031 14.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|14521160|ref|NP_126635.1| - 0.019 15.5 0.1 0.031 14.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|14521160|ref|NP_126635.1| - 0.019 15.3 0.0 0.036 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|14521160|ref|NP_126635.1| - 0.023 14.4 0.1 0.043 13.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MeaB PF03308.16 gi|14521160|ref|NP_126635.1| - 0.035 13.1 0.0 0.057 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TIP49 PF06068.13 gi|14521160|ref|NP_126635.1| - 0.037 13.2 0.0 0.061 12.5 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 gi|14521160|ref|NP_126635.1| - 0.04 13.7 0.0 0.066 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|14521160|ref|NP_126635.1| - 0.069 13.5 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 gi|14521160|ref|NP_126635.1| - 0.072 13.2 0.0 0.15 12.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|14521160|ref|NP_126635.1| - 0.073 12.1 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|14521160|ref|NP_126635.1| - 0.11 12.4 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 NTPase ABC_tran PF00005.27 gi|14521160|ref|NP_126635.1| - 0.14 12.7 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RsmJ PF04378.13 gi|14521160|ref|NP_126635.1| - 0.15 11.3 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ AAA_11 PF13086.6 gi|14521160|ref|NP_126635.1| - 0.16 11.7 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|14521160|ref|NP_126635.1| - 0.24 11.9 0.2 0.47 10.9 0.2 1.4 1 0 0 1 1 1 0 AAA domain Glyco_hydro_57 PF03065.15 gi|14521162|ref|NP_126637.1| - 4.8e-05 22.7 0.1 8.6e-05 21.9 0.1 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 OGG_N PF07934.12 gi|14521162|ref|NP_126637.1| - 0.053 13.6 0.3 1.4 9.0 0.0 2.7 2 1 0 2 2 2 0 8-oxoguanine DNA glycosylase, N-terminal domain NTP_transferase PF00483.23 gi|14521163|ref|NP_126638.1| - 3.4e-45 154.6 0.0 5.3e-45 153.9 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|14521163|ref|NP_126638.1| - 1.3e-14 53.3 6.8 1.3e-05 24.7 2.2 3.4 2 1 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|14521163|ref|NP_126638.1| - 2e-11 44.5 0.0 2.7e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|14521163|ref|NP_126638.1| - 0.0027 17.5 0.0 0.0042 16.8 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|14521163|ref|NP_126638.1| - 0.0065 14.7 0.5 0.0094 14.1 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) ATP-synt_F6 PF05511.11 gi|14521163|ref|NP_126638.1| - 0.042 14.3 0.5 0.084 13.3 0.1 1.7 2 0 0 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 CTP_transf_3 PF02348.19 gi|14521163|ref|NP_126638.1| - 0.086 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Cytidylyltransferase DUF1194 PF06707.11 gi|14521163|ref|NP_126638.1| - 0.2 10.9 0.1 0.31 10.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1194) Hexapep_2 PF14602.6 gi|14521163|ref|NP_126638.1| - 0.63 9.8 9.6 3.6 7.4 3.9 3.7 3 1 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase tRNA-synt_2 PF00152.20 gi|14521164|ref|NP_126639.1| - 7.1e-98 327.5 1.1 8.5e-98 327.3 1.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|14521164|ref|NP_126639.1| - 2.1e-13 50.0 0.7 4.8e-13 48.9 0.7 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|14521164|ref|NP_126639.1| - 0.021 14.3 2.0 0.33 10.4 0.2 2.7 3 0 0 3 3 3 0 tRNA synthetases class II core domain (F) KH_5 PF13184.6 gi|14521164|ref|NP_126639.1| - 0.12 12.5 0.6 0.27 11.4 0.0 1.8 2 0 0 2 2 2 0 NusA-like KH domain AFOR_C PF01314.18 gi|14521165|ref|NP_126640.1| - 1.5e-144 481.7 0.0 1.9e-144 481.4 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|14521165|ref|NP_126640.1| - 3.2e-86 288.3 0.5 5.5e-86 287.5 0.5 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain ThiS PF02597.20 gi|14521166|ref|NP_126641.1| - 3.3e-18 66.1 0.1 3.7e-18 65.9 0.1 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|14521166|ref|NP_126641.1| - 0.0051 17.1 0.0 0.0065 16.8 0.0 1.2 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) TGS PF02824.21 gi|14521166|ref|NP_126641.1| - 0.012 15.7 0.0 0.028 14.5 0.0 1.7 2 0 0 2 2 2 0 TGS domain SPASM PF13186.6 gi|14521167|ref|NP_126642.1| - 9.8e-16 58.0 0.3 3.3e-15 56.4 0.3 2.0 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Radical_SAM PF04055.21 gi|14521167|ref|NP_126642.1| - 1.1e-14 55.1 0.1 2.3e-14 54.1 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|14521167|ref|NP_126642.1| - 7.6e-06 26.2 0.0 1.7e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14521167|ref|NP_126642.1| - 1.5e-05 25.1 0.0 3.2e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain MRG PF05712.13 gi|14521168|ref|NP_126643.1| - 0.0031 16.8 1.3 0.0037 16.6 1.3 1.2 1 0 0 1 1 1 1 MRG DUF4298 PF14131.6 gi|14521168|ref|NP_126643.1| - 0.015 15.2 1.2 0.024 14.6 1.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4298) Imm3 PF14425.6 gi|14521168|ref|NP_126643.1| - 0.031 14.3 4.1 0.037 14.1 2.6 1.8 1 1 1 2 2 2 0 Immunity protein Imm3 GIT_CC PF16559.5 gi|14521168|ref|NP_126643.1| - 0.071 13.0 3.7 0.1 12.5 2.7 1.9 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Herpes_U44 PF04533.13 gi|14521168|ref|NP_126643.1| - 0.079 12.6 0.1 0.085 12.5 0.1 1.2 1 0 0 1 1 1 0 Herpes virus U44 protein MCM6_C PF18263.1 gi|14521168|ref|NP_126643.1| - 0.13 12.5 6.5 0.15 12.3 6.5 1.1 1 0 0 1 1 1 0 MCM6 C-terminal winged-helix domain Cbl_N PF02262.16 gi|14521168|ref|NP_126643.1| - 0.2 11.7 4.0 0.65 10.0 4.0 1.9 1 1 0 1 1 1 0 CBL proto-oncogene N-terminal domain 1 NYD-SP28_assoc PF14775.6 gi|14521168|ref|NP_126643.1| - 0.26 11.4 14.2 0.17 12.0 3.4 2.6 1 1 2 3 3 3 0 Sperm tail C-terminal domain YabA PF06156.13 gi|14521168|ref|NP_126643.1| - 0.33 11.6 8.1 0.065 13.9 4.0 1.8 1 1 1 2 2 2 0 Initiation control protein YabA FtsL PF04999.13 gi|14521168|ref|NP_126643.1| - 0.34 10.9 3.9 1.8 8.6 0.2 2.2 2 0 0 2 2 2 0 Cell division protein FtsL HALZ PF02183.18 gi|14521168|ref|NP_126643.1| - 1.4 9.2 9.6 0.39 11.0 4.5 2.6 1 1 1 2 2 2 0 Homeobox associated leucine zipper DisA_N PF02457.16 gi|14521169|ref|NP_126644.1| - 5.3e-21 74.4 0.1 1.9e-20 72.6 0.0 1.9 2 0 0 2 2 2 1 DisA bacterial checkpoint controller nucleotide-binding Bet_v_1 PF00407.19 gi|14521169|ref|NP_126644.1| - 0.057 13.3 0.1 0.097 12.6 0.1 1.3 1 0 0 1 1 1 0 Pathogenesis-related protein Bet v I family Inhibitor_I78 PF11720.8 gi|14521169|ref|NP_126644.1| - 0.18 11.9 0.0 0.41 10.7 0.0 1.6 1 0 0 1 1 1 0 Peptidase inhibitor I78 family Flavoprotein PF02441.19 gi|14521170|ref|NP_126645.1| - 1.4e-28 99.6 0.1 1.8e-28 99.3 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein HTH_24 PF13412.6 gi|14521171|ref|NP_126646.1| - 6.9e-15 54.3 1.0 1.1e-14 53.7 1.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|14521171|ref|NP_126646.1| - 3e-12 46.1 0.3 4.5e-12 45.6 0.3 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 gi|14521171|ref|NP_126646.1| - 6.1e-07 29.4 0.0 9e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521171|ref|NP_126646.1| - 4.6e-06 26.4 0.1 7.4e-06 25.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|14521171|ref|NP_126646.1| - 8.7e-06 25.5 0.0 1.5e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|14521171|ref|NP_126646.1| - 0.00029 20.7 0.4 0.00058 19.8 0.4 1.5 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.16 gi|14521171|ref|NP_126646.1| - 0.00044 19.7 0.1 0.00077 18.9 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 TrmB PF01978.19 gi|14521171|ref|NP_126646.1| - 0.00059 19.7 0.0 0.00096 19.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|14521171|ref|NP_126646.1| - 0.0025 17.7 0.0 0.0042 16.9 0.0 1.3 1 0 0 1 1 1 1 MarR family Penicillinase_R PF03965.16 gi|14521171|ref|NP_126646.1| - 0.0046 17.3 0.1 0.016 15.6 0.0 1.7 2 0 0 2 2 2 1 Penicillinase repressor B-block_TFIIIC PF04182.12 gi|14521171|ref|NP_126646.1| - 0.0064 16.6 0.0 0.012 15.7 0.0 1.5 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC DUF742 PF05331.11 gi|14521171|ref|NP_126646.1| - 0.0065 16.3 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_23 PF13384.6 gi|14521171|ref|NP_126646.1| - 0.0076 16.0 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_DeoR PF08220.12 gi|14521171|ref|NP_126646.1| - 0.0076 16.0 0.2 0.012 15.3 0.2 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|14521171|ref|NP_126646.1| - 0.0085 16.6 0.1 0.017 15.6 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|14521171|ref|NP_126646.1| - 0.052 13.5 0.3 0.097 12.6 0.3 1.4 1 0 0 1 1 1 0 MarR family Sigma70_r4_2 PF08281.12 gi|14521171|ref|NP_126646.1| - 0.068 12.9 0.0 0.15 11.8 0.0 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 DUF2250 PF10007.9 gi|14521171|ref|NP_126646.1| - 0.11 12.7 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_Tnp_Tc3_2 PF01498.18 gi|14521171|ref|NP_126646.1| - 0.12 12.7 0.1 0.18 12.1 0.1 1.3 1 0 0 1 1 1 0 Transposase HTH_38 PF13936.6 gi|14521171|ref|NP_126646.1| - 0.16 11.8 0.2 0.53 10.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain RuvB_C PF05491.13 gi|14521171|ref|NP_126646.1| - 0.16 11.8 2.1 0.49 10.3 0.1 2.5 2 1 0 3 3 3 0 RuvB C-terminal winged helix domain CYTH PF01928.21 gi|14521172|ref|NP_126647.1| - 6e-32 111.0 1.7 6.8e-32 110.8 1.7 1.0 1 0 0 1 1 1 1 CYTH domain Glyoxalase_5 PF14696.6 gi|14521172|ref|NP_126647.1| - 0.041 14.1 0.1 0.07 13.3 0.1 1.4 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal tRNA-synt_2e PF02091.15 gi|14521172|ref|NP_126647.1| - 0.044 13.0 0.0 0.047 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit tRNA-synt_1b PF00579.25 gi|14521173|ref|NP_126648.1| - 2.5e-43 148.5 0.1 4.1e-43 147.8 0.1 1.3 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) Rubrerythrin PF02915.17 gi|14521174|ref|NP_126649.1| - 1.3e-31 109.9 4.2 2.1e-31 109.1 4.2 1.4 1 0 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.6 gi|14521174|ref|NP_126649.1| - 0.0008 19.6 0.0 0.0015 18.8 0.0 1.5 1 1 0 1 1 1 1 Ferritin-like domain Gal4_dimer PF03902.13 gi|14521174|ref|NP_126649.1| - 0.047 13.8 0.1 12 6.2 0.0 2.7 2 0 0 2 2 2 0 Gal4-like dimerisation domain CortBP2 PF09727.9 gi|14521174|ref|NP_126649.1| - 0.79 9.6 6.1 0.9 9.4 0.6 2.5 3 0 0 3 3 3 0 Cortactin-binding protein-2 RNA_binding PF01877.17 gi|14521175|ref|NP_126650.1| - 4.5e-17 62.4 0.0 6e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 RNA binding ACOX PF01756.19 gi|14521175|ref|NP_126650.1| - 0.19 11.3 0.0 0.91 9.1 0.0 1.8 2 0 0 2 2 2 0 Acyl-CoA oxidase TBP PF00352.21 gi|14521176|ref|NP_126651.1| - 1.1e-56 188.7 0.0 3.5e-28 97.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|14521176|ref|NP_126651.1| - 4.8e-08 33.0 0.0 0.00014 21.9 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|14521176|ref|NP_126651.1| - 0.078 12.7 0.0 15 5.4 0.0 2.3 2 0 0 2 2 2 0 NAD(P)H dehydrogenase subunit S Lip_prot_lig_C PF10437.9 gi|14521176|ref|NP_126651.1| - 0.12 12.4 0.0 6.2 6.9 0.0 2.6 2 1 1 3 3 3 0 Bacterial lipoate protein ligase C-terminus AAA_17 PF13207.6 gi|33356737|ref|NP_126652.2| - 7.2e-18 65.3 0.2 1.3e-17 64.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|33356737|ref|NP_126652.2| - 1.8e-12 47.9 0.0 3e-12 47.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|33356737|ref|NP_126652.2| - 4.9e-07 30.0 0.0 9.7e-07 29.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|33356737|ref|NP_126652.2| - 3.3e-05 24.0 0.0 3.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase Zeta_toxin PF06414.12 gi|33356737|ref|NP_126652.2| - 0.00018 20.9 0.0 0.00039 19.7 0.0 1.6 1 1 0 1 1 1 1 Zeta toxin CoaE PF01121.20 gi|33356737|ref|NP_126652.2| - 0.0024 17.5 0.0 0.011 15.4 0.0 1.9 2 0 0 2 2 2 1 Dephospho-CoA kinase CPT PF07931.12 gi|33356737|ref|NP_126652.2| - 0.012 15.5 0.1 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein HEM4 PF02602.15 gi|33356737|ref|NP_126652.2| - 0.041 13.2 0.0 0.09 12.1 0.0 1.5 1 1 0 1 1 1 0 Uroporphyrinogen-III synthase HemD APS_kinase PF01583.20 gi|33356737|ref|NP_126652.2| - 0.06 13.2 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase KTI12 PF08433.10 gi|33356737|ref|NP_126652.2| - 0.12 11.8 0.7 0.21 11.0 0.1 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_28 PF13521.6 gi|33356737|ref|NP_126652.2| - 0.18 12.0 0.2 0.37 11.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain HGTP_anticodon PF03129.20 gi|14521178|ref|NP_126653.1| - 6.5e-26 90.3 1.3 1.4e-25 89.3 1.3 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|14521178|ref|NP_126653.1| - 1.1e-23 84.1 0.2 3.4e-23 82.6 0.1 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) ProRS-C_1 PF09180.11 gi|14521178|ref|NP_126653.1| - 3.2e-18 65.7 1.0 1.6e-17 63.5 0.6 2.2 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal ProRS-C_2 PF09181.10 gi|14521178|ref|NP_126653.1| - 0.029 14.5 2.2 0.033 14.3 0.1 2.2 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal DUF2262 PF10020.9 gi|14521178|ref|NP_126653.1| - 0.18 12.2 3.1 0.14 12.5 0.8 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2262) Rad50_zn_hook PF04423.14 gi|14521178|ref|NP_126653.1| - 0.24 11.3 3.2 0.62 9.9 0.6 2.8 2 0 0 2 2 2 0 Rad50 zinc hook motif ERp29 PF07749.12 gi|14521178|ref|NP_126653.1| - 0.31 12.0 1.8 8.9 7.3 0.6 2.7 2 0 0 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain Polysacc_synt_C PF14667.6 gi|14521179|ref|NP_126654.1| - 0.00026 21.1 15.9 0.00026 21.1 15.9 4.6 2 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Metallophos_2 PF12850.7 gi|14521180|ref|NP_126655.1| - 0.033 14.4 0.0 0.57 10.4 0.0 2.1 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain DEAD PF00270.29 gi|14521181|ref|NP_126656.1| - 3.6e-24 85.5 0.0 1.8e-23 83.2 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|14521181|ref|NP_126656.1| - 1e-17 64.6 0.0 3.9e-17 62.8 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|14521181|ref|NP_126656.1| - 2e-17 63.5 0.0 5.8e-17 62.0 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|14521181|ref|NP_126656.1| - 4.1e-07 30.2 0.0 7.4e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Adeno_IVa2 PF02456.15 gi|14521181|ref|NP_126656.1| - 0.034 13.0 0.0 0.06 12.1 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein Lactamase_B_2 PF12706.7 gi|14521182|ref|NP_126657.1| - 9.3e-05 22.0 0.0 0.00017 21.2 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|14521182|ref|NP_126657.1| - 0.00062 19.7 0.0 0.0013 18.7 0.0 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14521182|ref|NP_126657.1| - 0.028 14.5 0.0 0.07 13.1 0.0 1.6 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily DegT_DnrJ_EryC1 PF01041.17 gi|14521182|ref|NP_126657.1| - 0.18 11.0 0.1 0.31 10.3 0.1 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family HIT PF01230.23 gi|14521183|ref|NP_126658.1| - 6.2e-26 91.0 0.0 8.5e-26 90.6 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|14521183|ref|NP_126658.1| - 1e-15 58.2 0.0 1.5e-15 57.7 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 gi|14521183|ref|NP_126658.1| - 0.085 12.6 0.0 0.13 12.0 0.0 1.3 1 1 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain CwfJ_C_1 PF04677.15 gi|14521183|ref|NP_126658.1| - 0.19 11.6 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 AI-2E_transport PF01594.16 gi|14521184|ref|NP_126659.1| - 3.3e-37 128.4 34.6 4.2e-37 128.0 34.6 1.0 1 0 0 1 1 1 1 AI-2E family transporter Jagunal PF07086.12 gi|14521184|ref|NP_126659.1| - 4.3 7.4 13.9 0.024 14.7 1.8 2.5 2 1 1 3 3 3 0 Jagunal, ER re-organisation during oogenesis DUF1772 PF08592.11 gi|14521184|ref|NP_126659.1| - 9.2 6.6 14.2 0.58 10.5 0.3 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) Isochorismatase PF00857.20 gi|14521185|ref|NP_126660.1| - 2.5e-47 161.3 0.0 2.8e-47 161.1 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family UPF0020 PF01170.18 gi|14521186|ref|NP_126661.1| - 4e-13 49.5 0.0 4.2e-12 46.2 0.0 2.3 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 gi|14521186|ref|NP_126661.1| - 3.4e-09 36.8 0.1 4.3e-08 33.2 0.1 2.2 1 1 0 1 1 1 1 DNA methylase Methyltransf_31 PF13847.6 gi|14521186|ref|NP_126661.1| - 1.2e-05 25.2 0.0 1.7e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521186|ref|NP_126661.1| - 5.2e-05 23.9 0.0 0.00011 22.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521186|ref|NP_126661.1| - 0.0051 16.4 0.0 0.0076 15.8 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.6 gi|14521186|ref|NP_126661.1| - 0.0051 16.7 0.0 0.0098 15.7 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521186|ref|NP_126661.1| - 0.019 15.6 0.0 0.04 14.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14521186|ref|NP_126661.1| - 0.045 14.5 0.0 0.078 13.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MethyltransfD12 PF02086.15 gi|14521186|ref|NP_126661.1| - 0.045 13.4 0.0 0.085 12.5 0.0 1.5 2 0 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.15 gi|14521186|ref|NP_126661.1| - 0.055 13.1 0.0 0.17 11.5 0.0 1.7 1 1 1 2 2 2 0 Conserved hypothetical protein 95 TPMT PF05724.11 gi|14521186|ref|NP_126661.1| - 0.13 11.8 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) YfdX PF10938.8 gi|14521187|ref|NP_126662.1| - 2.4e-06 27.5 0.9 0.00068 19.6 0.1 2.7 2 1 0 3 3 3 2 YfdX protein Prefoldin_3 PF13758.6 gi|14521187|ref|NP_126662.1| - 0.066 13.3 3.3 0.085 12.9 0.3 2.5 3 0 0 3 3 3 0 Prefoldin subunit DUF4363 PF14276.6 gi|14521187|ref|NP_126662.1| - 0.085 13.0 6.7 2.7 8.2 0.2 3.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4363) Cytochrom_B562 PF07361.11 gi|14521187|ref|NP_126662.1| - 0.2 12.3 1.9 5.2 7.8 0.0 3.1 3 1 0 3 3 3 0 Cytochrome b562 SgrR_N PF12793.7 gi|14521187|ref|NP_126662.1| - 0.68 10.2 2.6 2.7 8.2 0.1 2.8 3 0 0 3 3 3 0 Sugar transport-related sRNA regulator N-term HTH_24 PF13412.6 gi|14521188|ref|NP_126663.1| - 7e-08 31.9 0.1 1.6e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|14521188|ref|NP_126663.1| - 1.5e-06 28.0 0.1 3.2e-06 26.9 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|14521188|ref|NP_126663.1| - 3.3e-05 23.7 0.0 6.9e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|14521188|ref|NP_126663.1| - 4.5e-05 23.3 0.0 0.00011 22.0 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|14521188|ref|NP_126663.1| - 0.00011 22.0 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|14521188|ref|NP_126663.1| - 0.00012 22.5 0.2 0.0017 18.8 0.0 2.3 1 1 1 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|14521188|ref|NP_126663.1| - 0.00016 21.8 0.0 0.00048 20.3 0.0 1.9 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|14521188|ref|NP_126663.1| - 0.034 14.1 0.0 0.085 12.8 0.0 1.7 1 0 0 1 1 1 0 HTH domain Penicillinase_R PF03965.16 gi|14521188|ref|NP_126663.1| - 0.096 13.0 1.8 0.18 12.2 0.2 2.2 2 1 1 3 3 3 0 Penicillinase repressor DUF2120 PF09893.9 gi|14521188|ref|NP_126663.1| - 0.1 12.7 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) HTH_5 PF01022.20 gi|14521188|ref|NP_126663.1| - 0.11 12.3 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_1 PF00126.27 gi|14521188|ref|NP_126663.1| - 0.12 12.4 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.7 gi|14521188|ref|NP_126663.1| - 0.17 12.0 0.1 0.3 11.2 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain tRNA-synt_1g PF09334.11 gi|14521189|ref|NP_126664.1| - 1.2e-159 531.3 0.0 1.6e-159 530.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|14521189|ref|NP_126664.1| - 1.8e-32 111.3 0.1 3.3e-32 110.4 0.1 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.22 gi|14521189|ref|NP_126664.1| - 8e-17 60.7 0.6 6.6e-08 31.3 0.1 3.7 3 1 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|14521189|ref|NP_126664.1| - 4.2e-13 49.5 0.0 8.3e-13 48.6 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|14521189|ref|NP_126664.1| - 0.00093 18.6 0.0 0.85 8.9 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain DZR PF12773.7 gi|14521189|ref|NP_126664.1| - 0.014 15.4 3.4 0.027 14.5 3.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon Tudor-knot PF11717.8 gi|14521189|ref|NP_126664.1| - 0.037 13.9 0.2 6.8 6.7 0.0 3.2 2 1 1 3 3 3 0 RNA binding activity-knot of a chromodomain zf_C2H2_13 PF18508.1 gi|14521189|ref|NP_126664.1| - 0.26 10.9 1.5 15 5.3 0.2 2.6 2 0 0 2 2 2 0 Zinc finger domain DUF3090 PF11290.8 gi|14521189|ref|NP_126664.1| - 0.44 10.3 2.8 5.3 6.8 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3090) zinc_ribbon_2 PF13240.6 gi|14521189|ref|NP_126664.1| - 2.2 8.1 6.4 5.3 6.9 0.3 3.1 2 1 0 2 2 2 0 zinc-ribbon domain Cys_rich_CPXG PF14255.6 gi|14521189|ref|NP_126664.1| - 4.1 7.4 8.3 48 4.0 0.0 3.4 1 1 1 2 2 2 0 Cysteine-rich CPXCG CutA1 PF03091.15 gi|14521190|ref|NP_126665.1| - 5.8e-34 115.9 1.6 6.5e-34 115.7 1.6 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein Chordopox_A30L PF06015.12 gi|14521190|ref|NP_126665.1| - 0.12 12.2 0.1 6.6 6.6 0.0 2.2 2 0 0 2 2 2 0 Chordopoxvirus A30L protein NMD3 PF04981.13 gi|14521191|ref|NP_126666.1| - 3.5e-63 213.3 1.4 4.9e-63 212.8 1.4 1.2 1 0 0 1 1 1 1 NMD3 family EFP PF01132.20 gi|14521191|ref|NP_126666.1| - 0.02 14.9 2.1 0.072 13.1 1.3 2.4 2 1 0 2 2 2 0 Elongation factor P (EF-P) OB domain Rpr2 PF04032.16 gi|14521191|ref|NP_126666.1| - 0.028 14.7 1.1 6 7.2 0.0 2.6 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-ribbon_3 PF13248.6 gi|14521191|ref|NP_126666.1| - 1.4 8.4 4.2 12 5.4 0.0 3.1 3 0 0 3 3 3 0 zinc-ribbon domain DZR PF12773.7 gi|14521191|ref|NP_126666.1| - 4.3 7.5 7.3 1.2e+02 2.8 0.0 3.0 2 1 0 2 2 2 0 Double zinc ribbon DUF424 PF04242.13 gi|14521192|ref|NP_126667.1| - 3e-31 107.5 0.1 3.4e-31 107.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) CT_A_B PF02626.15 gi|14521193|ref|NP_126668.1| - 6.1e-87 291.6 0.0 7.1e-87 291.4 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain A and B YqzL PF14006.6 gi|14521193|ref|NP_126668.1| - 0.16 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 YqzL-like protein CT_C_D PF02682.16 gi|14521194|ref|NP_126669.1| - 1.2e-76 256.9 0.0 1.5e-76 256.7 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D LamB_YcsF PF03746.16 gi|14521195|ref|NP_126670.1| - 2.1e-108 361.5 0.0 2.3e-108 361.4 0.0 1.0 1 0 0 1 1 1 1 LamB/YcsF family ATPase_2 PF01637.18 gi|14521196|ref|NP_126671.1| - 7.3e-27 94.8 1.0 9.1e-27 94.5 0.3 1.5 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521196|ref|NP_126671.1| - 5.4e-11 42.6 0.1 1.9e-08 34.4 0.1 2.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521196|ref|NP_126671.1| - 1.3e-07 32.1 0.0 2.8e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521196|ref|NP_126671.1| - 0.00023 21.4 0.0 0.00075 19.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain DUF1148 PF06618.11 gi|14521196|ref|NP_126671.1| - 0.012 15.7 0.0 0.037 14.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1148) DUF815 PF05673.13 gi|14521196|ref|NP_126671.1| - 0.098 11.8 0.0 0.33 10.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) RsgA_GTPase PF03193.16 gi|14521196|ref|NP_126671.1| - 0.099 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase Peptidase_S41 PF03572.18 gi|14521196|ref|NP_126671.1| - 0.1 12.2 0.0 0.33 10.5 0.0 1.8 2 0 0 2 2 2 0 Peptidase family S41 PhoU PF01895.19 gi|14521196|ref|NP_126671.1| - 0.16 12.4 1.1 0.61 10.6 0.1 2.4 3 0 0 3 3 3 0 PhoU domain EamA PF00892.20 gi|14521197|ref|NP_126672.1| - 8.2e-24 84.3 21.0 8.9e-24 84.2 21.0 1.0 1 0 0 1 1 1 1 EamA-like transporter family Gram_pos_anchor PF00746.21 gi|14521197|ref|NP_126672.1| - 0.037 14.0 0.9 0.037 14.0 0.9 3.4 2 1 1 3 3 3 0 LPXTG cell wall anchor motif TPT PF03151.16 gi|14521197|ref|NP_126672.1| - 0.044 13.1 9.6 0.052 12.9 9.6 1.1 1 0 0 1 1 1 0 Triose-phosphate Transporter family TMEM234 PF10639.9 gi|14521197|ref|NP_126672.1| - 0.21 11.6 5.1 0.087 12.9 1.2 1.9 1 1 1 2 2 2 0 Putative transmembrane family 234 DUF1345 PF07077.11 gi|14521197|ref|NP_126672.1| - 0.81 9.4 9.4 0.45 10.2 3.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1345) Peptidase_U4 PF03419.13 gi|14521197|ref|NP_126672.1| - 2.3 7.4 13.4 3 7.1 13.4 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF438 PF04282.13 gi|14521198|ref|NP_126673.1| - 1.4e-25 89.0 1.8 3.2e-25 87.9 0.5 2.4 3 0 0 3 3 3 1 Family of unknown function (DUF438) PAS_10 PF13596.6 gi|14521198|ref|NP_126673.1| - 3.1e-24 85.6 0.1 1.6e-23 83.3 0.0 2.2 2 1 1 3 3 3 1 PAS domain Hemerythrin PF01814.23 gi|14521198|ref|NP_126673.1| - 5.6e-21 75.5 1.1 1.1e-20 74.6 1.1 1.5 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain PAS_4 PF08448.10 gi|14521198|ref|NP_126673.1| - 0.0057 16.9 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 PAS fold DUF5638 PF18688.1 gi|14521198|ref|NP_126673.1| - 0.09 13.1 0.3 0.31 11.4 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5638) sCache_3_3 PF17202.4 gi|14521198|ref|NP_126673.1| - 0.11 12.9 0.1 0.23 11.9 0.1 1.5 1 0 0 1 1 1 0 Single cache domain 3 CbiZ PF01955.18 gi|14521199|ref|NP_126674.1| - 1.7e-43 149.0 0.1 1.9e-43 148.8 0.1 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase DUF5579 PF17742.1 gi|14521199|ref|NP_126674.1| - 0.11 12.1 0.0 0.57 9.7 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5579) Prismane PF03063.20 gi|14521200|ref|NP_126675.1| - 4.3e-113 378.7 0.0 1.7e-94 317.4 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family RnlB_antitoxin PF15933.5 gi|14521200|ref|NP_126675.1| - 0.12 12.6 0.0 0.35 11.2 0.0 1.7 1 0 0 1 1 1 0 Antitoxin to bacterial toxin RNase LS or RnlA HTH_24 PF13412.6 gi|14521201|ref|NP_126676.1| - 1.3e-05 24.7 0.4 1.3e-05 24.7 0.4 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_3 PF01381.22 gi|14521201|ref|NP_126676.1| - 3.2e-05 23.9 0.4 6.9e-05 22.8 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_5 PF01022.20 gi|14521201|ref|NP_126676.1| - 9.1e-05 22.3 0.6 0.00018 21.3 0.6 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 gi|14521201|ref|NP_126676.1| - 0.00017 21.3 0.2 0.00036 20.2 0.2 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_37 PF13744.6 gi|14521201|ref|NP_126676.1| - 0.00025 20.9 0.9 0.0019 18.1 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|14521201|ref|NP_126676.1| - 0.00031 20.4 1.1 0.00038 20.1 0.2 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_31 PF13560.6 gi|14521201|ref|NP_126676.1| - 0.00033 20.9 0.1 0.00053 20.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|14521201|ref|NP_126676.1| - 0.001 18.9 0.1 0.0021 17.9 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_19 PF12844.7 gi|14521201|ref|NP_126676.1| - 0.0016 18.4 1.4 0.0041 17.1 0.8 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14521201|ref|NP_126676.1| - 0.029 13.9 0.7 0.056 13.0 0.7 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|14521201|ref|NP_126676.1| - 0.03 14.2 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 ECF sigma factor MarR PF01047.22 gi|14521201|ref|NP_126676.1| - 0.034 14.1 0.1 0.066 13.1 0.1 1.5 1 0 0 1 1 1 0 MarR family PAX PF00292.18 gi|14521201|ref|NP_126676.1| - 0.049 13.5 0.1 0.071 13.0 0.1 1.3 1 1 0 1 1 1 0 'Paired box' domain ThiI PF02568.14 gi|14521201|ref|NP_126676.1| - 0.05 13.2 0.0 0.064 12.8 0.0 1.2 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) HTH_IclR PF09339.10 gi|14521201|ref|NP_126676.1| - 0.051 13.4 0.3 0.092 12.6 0.1 1.6 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_1 PF00126.27 gi|14521201|ref|NP_126676.1| - 0.053 13.5 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Sigma70_r3 PF04539.16 gi|14521201|ref|NP_126676.1| - 0.071 13.2 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 DUF2443 PF10398.9 gi|14521201|ref|NP_126676.1| - 0.086 12.9 1.0 0.14 12.2 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) IZUMO PF15005.6 gi|14521201|ref|NP_126676.1| - 0.12 12.9 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF3631 PF12307.8 gi|14521201|ref|NP_126676.1| - 0.13 12.4 0.1 0.17 12.1 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3631) LacI PF00356.21 gi|14521201|ref|NP_126676.1| - 0.17 11.7 0.7 0.82 9.5 0.1 2.2 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_11 PF08279.12 gi|14521201|ref|NP_126676.1| - 0.19 11.7 1.4 0.35 10.8 0.4 1.9 2 1 0 2 2 2 0 HTH domain HTH_38 PF13936.6 gi|14521201|ref|NP_126676.1| - 1 9.2 4.9 0.45 10.3 0.8 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain MAF_flag10 PF01973.18 gi|14521202|ref|NP_126677.1| - 5.9e-29 101.0 0.0 9.6e-29 100.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.16 gi|14521202|ref|NP_126677.1| - 0.049 13.7 0.1 0.16 12.1 0.1 1.8 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain DUF4847 PF16139.5 gi|33356738|ref|NP_126678.2| - 0.054 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4847) SHOCT PF09851.9 gi|33356738|ref|NP_126678.2| - 0.15 11.8 1.6 0.48 10.2 1.6 1.9 1 0 0 1 1 1 0 Short C-terminal domain ABC2_membrane PF01061.24 gi|14521204|ref|NP_126679.1| - 9.9e-15 54.5 21.4 9.9e-15 54.5 21.4 1.8 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|14521204|ref|NP_126679.1| - 4.6e-08 32.5 30.1 4.6e-08 32.5 30.1 1.4 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|14521204|ref|NP_126679.1| - 0.0011 19.0 17.5 0.0011 19.0 17.5 2.6 1 1 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|14521205|ref|NP_126680.1| - 8.7e-31 107.3 0.0 1.9e-30 106.2 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|14521205|ref|NP_126680.1| - 5e-14 52.8 0.0 8e-09 35.7 0.0 2.8 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|14521205|ref|NP_126680.1| - 0.00023 21.8 0.7 0.0005 20.7 0.7 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_22 PF13401.6 gi|14521205|ref|NP_126680.1| - 0.0012 19.1 0.0 0.0066 16.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14521205|ref|NP_126680.1| - 0.0016 17.9 0.1 0.57 9.6 0.0 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|14521205|ref|NP_126680.1| - 0.0019 18.8 0.2 0.0048 17.4 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|14521205|ref|NP_126680.1| - 0.0036 17.0 0.0 0.0068 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|14521205|ref|NP_126680.1| - 0.0097 15.5 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_15 PF13175.6 gi|14521205|ref|NP_126680.1| - 0.021 14.6 0.0 2.6 7.6 0.0 2.7 3 0 0 3 3 3 0 AAA ATPase domain AAA_27 PF13514.6 gi|14521205|ref|NP_126680.1| - 0.024 14.2 0.1 0.095 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|14521205|ref|NP_126680.1| - 0.032 14.6 0.0 0.07 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|14521205|ref|NP_126680.1| - 0.13 11.9 0.1 1 9.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|14521205|ref|NP_126680.1| - 0.14 12.0 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 gi|14521205|ref|NP_126680.1| - 0.19 12.0 0.0 0.4 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Radical_SAM PF04055.21 gi|14521206|ref|NP_126681.1| - 1.2e-23 84.3 0.4 4.3e-23 82.5 0.2 2.0 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|14521206|ref|NP_126681.1| - 1.7e-08 34.9 0.9 4.8e-08 33.4 0.2 2.2 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|14521206|ref|NP_126681.1| - 2.3e-08 34.4 0.2 5.4e-08 33.2 0.2 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14521206|ref|NP_126681.1| - 3.3e-07 30.4 1.9 4.1e-07 30.1 0.2 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Chalcone PF02431.15 gi|14521206|ref|NP_126681.1| - 0.014 14.8 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 Chalcone-flavanone isomerase CoA_binding_3 PF13727.6 gi|14521206|ref|NP_126681.1| - 0.11 12.5 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 CoA-binding domain DUF3795 PF12675.7 gi|14521206|ref|NP_126681.1| - 0.87 10.0 5.4 13 6.3 1.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3795) PseudoU_synth_1 PF01416.20 gi|14521207|ref|NP_126682.1| - 2.7e-26 92.2 0.0 1e-20 74.2 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase Methyltranf_PUA PF13636.6 gi|14521209|ref|NP_126684.1| - 5.5e-11 42.3 2.5 9.6e-11 41.5 2.5 1.4 1 0 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF FmdE PF02663.14 gi|14521211|ref|NP_126686.1| - 1.1e-37 129.1 0.0 1.4e-37 128.7 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|14521211|ref|NP_126686.1| - 4e-07 29.8 0.2 7.7e-07 28.9 0.2 1.4 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.22 gi|14521211|ref|NP_126686.1| - 0.14 12.4 0.4 0.24 11.7 0.4 1.4 1 0 0 1 1 1 0 LIM domain Peripla_BP_2 PF01497.18 gi|14521212|ref|NP_126687.1| - 1.3e-28 100.2 0.0 1.8e-28 99.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 gi|14521213|ref|NP_126688.1| - 1e-93 313.8 33.5 1.3e-93 313.5 33.5 1.0 1 0 0 1 1 1 1 FecCD transport family ABC_tran PF00005.27 gi|14521214|ref|NP_126689.1| - 3.8e-28 98.7 0.0 5.4e-28 98.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521214|ref|NP_126689.1| - 1.4e-12 48.1 0.5 3.1e-05 23.9 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|14521214|ref|NP_126689.1| - 1.4e-06 28.9 0.1 2.5e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14521214|ref|NP_126689.1| - 1.5e-06 27.8 0.2 0.049 13.0 0.1 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|14521214|ref|NP_126689.1| - 0.00012 21.9 0.1 0.22 11.2 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain ATPase_2 PF01637.18 gi|14521214|ref|NP_126689.1| - 0.0002 21.3 0.0 0.00039 20.4 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_27 PF13514.6 gi|14521214|ref|NP_126689.1| - 0.0003 20.4 0.0 0.0005 19.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|14521214|ref|NP_126689.1| - 0.00039 20.2 0.1 0.03 14.0 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 gi|14521214|ref|NP_126689.1| - 0.0012 19.3 0.1 0.0023 18.4 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|14521214|ref|NP_126689.1| - 0.0015 18.2 0.0 0.0029 17.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|14521214|ref|NP_126689.1| - 0.0034 17.8 0.1 0.021 15.2 0.0 2.1 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|14521214|ref|NP_126689.1| - 0.0037 17.2 0.0 0.0071 16.3 0.0 1.5 1 0 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 gi|14521214|ref|NP_126689.1| - 0.0056 17.0 0.7 0.07 13.4 0.1 2.1 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|14521214|ref|NP_126689.1| - 0.0056 16.6 1.0 0.18 11.7 0.0 2.3 2 0 0 2 2 2 1 NTPase AAA_30 PF13604.6 gi|14521214|ref|NP_126689.1| - 0.0074 16.0 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|14521214|ref|NP_126689.1| - 0.012 14.3 0.0 0.13 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 gi|14521214|ref|NP_126689.1| - 0.016 14.0 0.1 3.5 6.3 0.0 2.3 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_19 PF13245.6 gi|14521214|ref|NP_126689.1| - 0.022 15.1 0.7 0.089 13.1 0.7 2.1 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|14521214|ref|NP_126689.1| - 0.024 14.5 0.1 0.041 13.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 gi|14521214|ref|NP_126689.1| - 0.031 14.3 0.0 0.12 12.4 0.1 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SbcCD_C PF13558.6 gi|14521214|ref|NP_126689.1| - 0.031 14.5 0.0 0.47 10.7 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit cobW PF02492.19 gi|14521214|ref|NP_126689.1| - 0.049 13.2 0.1 0.1 12.2 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.14 gi|14521214|ref|NP_126689.1| - 0.075 13.0 0.1 0.63 10.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SRP54 PF00448.22 gi|14521214|ref|NP_126689.1| - 0.085 12.5 0.1 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|14521214|ref|NP_126689.1| - 0.1 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|14521214|ref|NP_126689.1| - 0.1 12.6 0.1 0.85 9.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|14521214|ref|NP_126689.1| - 0.11 11.9 0.3 0.27 10.6 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|14521214|ref|NP_126689.1| - 0.12 12.2 0.0 0.17 11.8 0.0 1.4 1 1 0 1 1 1 0 Rad17 P-loop domain TatD_DNase PF01026.21 gi|14521215|ref|NP_126690.1| - 8e-31 107.3 0.0 9.3e-31 107.1 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase GTP_EFTU_D4 PF14578.6 gi|14521217|ref|NP_126692.1| - 4.3e-12 45.8 6.0 5.3e-12 45.5 6.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 gi|14521217|ref|NP_126692.1| - 0.0013 19.0 1.9 0.0013 19.0 1.9 1.9 2 0 0 2 2 2 1 Elongation factor Tu domain 2 Integrin_alpha PF00357.20 gi|14521217|ref|NP_126692.1| - 0.005 16.7 1.5 0.012 15.6 1.5 1.7 1 0 0 1 1 1 1 Integrin alpha cytoplasmic region 12TM_1 PF09847.9 gi|14521218|ref|NP_126693.1| - 3.7e-83 280.1 44.3 4.1e-83 280.0 44.3 1.0 1 0 0 1 1 1 1 Membrane protein of 12 TMs ABC_tran PF00005.27 gi|14521219|ref|NP_126694.1| - 8.6e-27 94.3 0.0 2e-26 93.1 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|14521219|ref|NP_126694.1| - 4.8e-15 56.1 2.8 6.8e-09 36.0 0.1 2.3 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|14521219|ref|NP_126694.1| - 0.0057 17.2 7.1 0.1 13.1 7.1 2.3 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14521219|ref|NP_126694.1| - 0.007 15.8 0.5 0.92 8.9 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|14521219|ref|NP_126694.1| - 0.0075 16.5 0.5 5 7.4 0.1 2.4 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|14521219|ref|NP_126694.1| - 0.0085 15.8 0.0 0.027 14.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|14521219|ref|NP_126694.1| - 0.019 14.7 0.1 1.4 8.5 0.1 2.3 2 0 0 2 2 2 0 AAA ATPase domain AAA_29 PF13555.6 gi|14521219|ref|NP_126694.1| - 0.019 14.7 0.3 0.039 13.7 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 gi|14521219|ref|NP_126694.1| - 0.053 13.4 0.1 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 Rad17 P-loop domain SbcCD_C PF13558.6 gi|14521219|ref|NP_126694.1| - 0.18 12.1 0.0 0.49 10.7 0.0 1.8 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AGOG PF09171.10 gi|14521220|ref|NP_126695.1| - 6.7e-81 271.3 0.0 8.6e-81 270.9 0.0 1.1 1 0 0 1 1 1 1 N-glycosylase/DNA lyase Retrotrans_gag PF03732.17 gi|14521220|ref|NP_126695.1| - 0.011 16.0 0.2 0.041 14.1 0.2 1.9 1 1 0 1 1 1 0 Retrotransposon gag protein GHMP_kinases_C PF08544.13 gi|14521221|ref|NP_126696.1| - 2.8e-07 30.8 0.0 6e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|14521221|ref|NP_126696.1| - 0.0013 18.9 0.0 0.0025 18.0 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain Nitro_FeMo-Co PF02579.17 gi|14521223|ref|NP_126698.1| - 1.4e-22 79.9 0.2 1.7e-22 79.6 0.2 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF5320 PF17253.2 gi|14521223|ref|NP_126698.1| - 0.13 13.4 8.4 0.27 12.3 8.4 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5320) HTH_38 PF13936.6 gi|14521225|ref|NP_126700.1| - 1.1e-09 37.9 1.0 1.5e-09 37.5 0.1 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|14521225|ref|NP_126700.1| - 7.4e-07 28.8 0.1 1.7e-06 27.7 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_11 PF08279.12 gi|14521225|ref|NP_126700.1| - 1.6e-05 24.7 0.1 4.5e-05 23.3 0.1 1.8 1 0 0 1 1 1 1 HTH domain GerE PF00196.19 gi|14521225|ref|NP_126700.1| - 3.9e-05 23.1 0.0 8.7e-05 22.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_5 PF01022.20 gi|14521225|ref|NP_126700.1| - 4.7e-05 23.2 0.0 0.00012 21.8 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|14521225|ref|NP_126700.1| - 6.2e-05 22.8 0.0 0.00013 21.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 gi|14521225|ref|NP_126700.1| - 0.00016 21.7 0.0 0.00032 20.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|14521225|ref|NP_126700.1| - 0.00031 20.5 0.1 0.0006 19.6 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14521225|ref|NP_126700.1| - 0.00065 19.2 0.2 0.0014 18.1 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Trp_repressor PF01371.19 gi|14521225|ref|NP_126700.1| - 0.0014 18.7 0.0 0.0025 17.9 0.0 1.4 1 0 0 1 1 1 1 Trp repressor protein HTH_7 PF02796.15 gi|14521225|ref|NP_126700.1| - 0.0015 18.5 0.0 0.005 16.9 0.0 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain of resolvase HTH_3 PF01381.22 gi|14521225|ref|NP_126700.1| - 0.0018 18.3 0.0 0.005 16.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix Fe_dep_repress PF01325.19 gi|14521225|ref|NP_126700.1| - 0.0024 18.0 0.4 0.0055 16.9 0.1 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_1 PF00126.27 gi|14521225|ref|NP_126700.1| - 0.0024 17.8 0.0 0.0081 16.1 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_36 PF13730.6 gi|14521225|ref|NP_126700.1| - 0.0025 17.7 0.0 0.0067 16.4 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|14521225|ref|NP_126700.1| - 0.0036 17.3 0.0 0.0068 16.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|14521225|ref|NP_126700.1| - 0.005 16.6 0.1 0.022 14.5 0.0 1.9 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14521225|ref|NP_126700.1| - 0.0052 16.7 0.0 0.014 15.4 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_50 PF18024.1 gi|14521225|ref|NP_126700.1| - 0.0064 16.1 0.0 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|14521225|ref|NP_126700.1| - 0.0073 15.7 0.0 0.015 14.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|14521225|ref|NP_126700.1| - 0.0089 16.0 0.0 0.02 14.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_AsnC-type PF13404.6 gi|14521225|ref|NP_126700.1| - 0.0091 15.8 0.1 0.042 13.7 0.1 2.1 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 gi|14521225|ref|NP_126700.1| - 0.013 15.8 0.0 0.024 15.0 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Sigma70_r4_2 PF08281.12 gi|14521225|ref|NP_126700.1| - 0.021 14.5 0.0 0.043 13.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MarR PF01047.22 gi|14521225|ref|NP_126700.1| - 0.021 14.8 0.0 0.047 13.6 0.0 1.5 1 0 0 1 1 1 0 MarR family TetR_N PF00440.23 gi|14521225|ref|NP_126700.1| - 0.03 14.1 0.0 0.052 13.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_Tnp_1 PF01527.20 gi|14521225|ref|NP_126700.1| - 0.035 14.4 0.0 0.081 13.2 0.0 1.6 1 0 0 1 1 1 0 Transposase HTH_10 PF04967.12 gi|14521225|ref|NP_126700.1| - 0.046 13.5 0.0 0.092 12.6 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain LexA_DNA_bind PF01726.16 gi|14521225|ref|NP_126700.1| - 0.049 13.4 0.1 0.093 12.5 0.1 1.4 1 0 0 1 1 1 0 LexA DNA binding domain E3_binding PF02817.17 gi|14521225|ref|NP_126700.1| - 0.051 13.9 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 e3 binding domain GntR PF00392.21 gi|14521225|ref|NP_126700.1| - 0.057 13.1 0.2 0.14 11.8 0.0 1.7 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family HTH_AraC PF00165.23 gi|14521225|ref|NP_126700.1| - 0.065 13.4 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family LacI PF00356.21 gi|14521225|ref|NP_126700.1| - 0.069 13.0 0.6 0.12 12.1 0.0 1.8 2 0 0 2 2 1 0 Bacterial regulatory proteins, lacI family HTH_40 PF14493.6 gi|14521225|ref|NP_126700.1| - 0.071 13.6 0.0 0.19 12.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|14521225|ref|NP_126700.1| - 0.1 12.4 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_31 PF13560.6 gi|14521225|ref|NP_126700.1| - 0.1 12.9 0.1 0.19 12.1 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_22 PF13309.6 gi|14521225|ref|NP_126700.1| - 0.11 12.6 0.0 0.28 11.3 0.0 1.7 1 0 0 1 1 1 0 HTH domain IF2_N PF04760.15 gi|14521225|ref|NP_126700.1| - 0.14 12.0 0.0 0.33 10.8 0.0 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region HD PF01966.22 gi|14521226|ref|NP_126701.1| - 1.8e-24 86.3 0.1 2.6e-24 85.8 0.1 1.2 1 0 0 1 1 1 1 HD domain HD_6 PF18019.1 gi|14521226|ref|NP_126701.1| - 0.0031 17.7 0.1 0.0046 17.1 0.1 1.4 1 1 0 1 1 1 1 HD domain HEPN PF05168.14 gi|14521226|ref|NP_126701.1| - 0.095 12.8 0.2 0.56 10.3 0.0 2.2 2 1 1 3 3 3 0 HEPN domain Helicase_C PF00271.31 gi|14521227|ref|NP_126702.1| - 9.2e-10 38.8 0.0 3e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|14521227|ref|NP_126702.1| - 2.7e-09 37.1 0.0 9.4e-09 35.3 0.0 2.0 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|14521227|ref|NP_126702.1| - 1.2e-08 35.2 1.2 4.1e-08 33.4 0.0 2.4 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|14521227|ref|NP_126702.1| - 0.00039 20.7 0.0 0.0028 18.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 gi|14521227|ref|NP_126702.1| - 0.0037 16.7 0.0 0.0082 15.6 0.0 1.6 1 1 0 1 1 1 1 PhoH-like protein Flavi_DEAD PF07652.14 gi|14521227|ref|NP_126702.1| - 0.015 15.2 0.1 11 6.0 0.1 2.9 3 0 0 3 3 3 0 Flavivirus DEAD domain TniB PF05621.11 gi|14521227|ref|NP_126702.1| - 0.018 14.5 0.0 0.96 8.8 0.0 2.5 2 0 0 2 2 2 0 Bacterial TniB protein AAA_25 PF13481.6 gi|14521227|ref|NP_126702.1| - 0.027 14.1 0.0 0.052 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_35 PF14516.6 gi|14521227|ref|NP_126702.1| - 0.029 13.2 0.1 0.33 9.8 0.1 2.1 1 1 0 1 1 1 0 AAA-like domain Cas_Csx9 PF09658.10 gi|14521228|ref|NP_126703.1| - 1.7e-161 537.7 0.9 1.9e-161 537.5 0.9 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csx9) AdoMet_MTase PF07757.13 gi|14521228|ref|NP_126703.1| - 0.085 13.2 0.1 0.17 12.3 0.1 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Cas_Cas5d PF09704.10 gi|14521229|ref|NP_126704.1| - 5.1e-06 26.5 0.0 6.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DevR PF01905.16 gi|14521230|ref|NP_126705.1| - 1.3e-84 283.4 0.0 1.7e-84 283.0 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 Cas_Csa5 PF09702.10 gi|14521231|ref|NP_126706.1| - 2.6e-21 75.9 0.0 1.1e-20 73.8 0.0 1.8 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Csa5) Nitro_FeMo-Co PF02579.17 gi|14521232|ref|NP_126707.1| - 2.2e-15 56.7 0.0 2.7e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor ICMT PF04140.14 gi|14521233|ref|NP_126708.1| - 0.061 13.8 1.5 0.2 12.1 0.1 2.1 1 1 1 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Methyltransf_25 PF13649.6 gi|14521234|ref|NP_126709.1| - 7.4e-09 36.2 0.0 3e-08 34.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521234|ref|NP_126709.1| - 1.8e-07 30.9 0.0 2.8e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 gi|14521234|ref|NP_126709.1| - 4.3e-07 30.5 0.0 8.1e-06 26.4 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14521234|ref|NP_126709.1| - 3.8e-06 26.8 0.0 9.5e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|14521234|ref|NP_126709.1| - 0.00013 21.5 0.0 0.00021 20.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|14521234|ref|NP_126709.1| - 0.001 18.7 0.0 0.0019 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|14521234|ref|NP_126709.1| - 0.0015 19.2 0.0 0.0044 17.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521234|ref|NP_126709.1| - 0.0018 18.2 0.0 0.0028 17.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Thump_like PF18096.1 gi|14521234|ref|NP_126709.1| - 0.0071 16.3 0.5 0.022 14.7 0.0 2.2 2 1 0 2 2 2 1 THUMP domain-like UPF0020 PF01170.18 gi|14521234|ref|NP_126709.1| - 0.015 15.0 0.0 0.054 13.2 0.0 1.9 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 zf-ZPR1 PF03367.13 gi|14521235|ref|NP_126710.1| - 5.9e-39 133.5 0.0 7.1e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Lar_restr_allev PF14354.6 gi|14521235|ref|NP_126710.1| - 6.1e-05 23.3 0.1 6.1e-05 23.3 0.1 1.7 2 0 0 2 2 2 1 Restriction alleviation protein Lar Rubredoxin_2 PF18073.1 gi|14521235|ref|NP_126710.1| - 0.0075 16.0 0.4 2.9 7.7 0.1 2.2 2 0 0 2 2 2 2 Rubredoxin metal binding domain DnaJ_CXXCXGXG PF00684.19 gi|14521235|ref|NP_126710.1| - 0.032 14.6 0.1 0.057 13.8 0.1 1.3 1 0 0 1 1 1 0 DnaJ central domain Prim_Zn_Ribbon PF08273.12 gi|14521235|ref|NP_126710.1| - 0.061 13.6 5.7 0.84 10.0 5.7 2.2 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase TF_Zn_Ribbon PF08271.12 gi|14521235|ref|NP_126710.1| - 0.25 10.9 2.5 0.99 9.0 2.5 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding Rad50_zn_hook PF04423.14 gi|14521235|ref|NP_126710.1| - 1.6 8.6 7.7 5.1 7.0 0.2 3.1 3 0 0 3 3 3 0 Rad50 zinc hook motif GDE_C PF06202.14 gi|14521236|ref|NP_126711.1| - 2.1e-11 43.4 0.0 4.2e-09 35.8 0.0 3.1 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N_bis PF14742.6 gi|14521236|ref|NP_126711.1| - 8.7e-08 31.9 0.1 0.0015 18.2 0.0 2.3 2 0 0 2 2 2 2 N-terminal domain of (some) glycogen debranching enzymes Glyco_hydro_100 PF12899.7 gi|14521236|ref|NP_126711.1| - 0.00063 18.5 0.0 0.18 10.4 0.0 2.4 2 1 0 2 2 2 2 Alkaline and neutral invertase Bac_rhamnosid6H PF17389.2 gi|14521236|ref|NP_126711.1| - 0.08 12.2 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Mucin PF01456.17 gi|14521237|ref|NP_126712.1| - 0.21 11.6 11.0 0.33 10.9 11.0 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein ACT PF01842.25 gi|14521238|ref|NP_126713.1| - 3.6e-10 39.4 1.3 6.1e-10 38.7 1.3 1.4 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|14521238|ref|NP_126713.1| - 1.2e-07 32.2 2.1 2e-07 31.5 2.1 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 gi|14521238|ref|NP_126713.1| - 0.0055 16.5 0.0 0.012 15.3 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 gi|14521238|ref|NP_126713.1| - 0.019 14.9 0.1 0.06 13.3 0.1 2.1 1 1 0 1 1 1 0 ACT domain EF1_GNE PF00736.19 gi|14521238|ref|NP_126713.1| - 0.025 14.8 3.7 0.026 14.7 1.5 2.0 2 0 0 2 2 2 0 EF-1 guanine nucleotide exchange domain AbrB-like PF14250.6 gi|14521238|ref|NP_126713.1| - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 AbrB-like transcriptional regulator NTP_transf_3 PF12804.7 gi|14521239|ref|NP_126714.1| - 1.4e-14 54.8 0.0 2.4e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain CDP-OH_P_transf PF01066.21 gi|14521239|ref|NP_126714.1| - 3.2e-12 47.0 0.3 3.2e-12 47.0 0.3 3.5 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase NTP_transferase PF00483.23 gi|14521239|ref|NP_126714.1| - 1.2e-10 41.4 0.2 3e-09 36.8 0.0 2.1 2 0 0 2 2 2 1 Nucleotidyl transferase IspD PF01128.19 gi|14521239|ref|NP_126714.1| - 1.2e-05 25.1 0.0 2.2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF2585 PF10755.9 gi|14521239|ref|NP_126714.1| - 0.05 13.3 0.6 0.11 12.3 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) PGK PF00162.19 gi|14521240|ref|NP_126715.1| - 1.9e-114 382.6 0.2 2.2e-114 382.4 0.2 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Semialdhyde_dhC PF02774.18 gi|14521241|ref|NP_126716.1| - 3e-31 108.9 0.0 5.1e-31 108.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|14521241|ref|NP_126716.1| - 9e-28 97.1 0.0 1.4e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|14521241|ref|NP_126716.1| - 0.078 13.1 0.0 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus PALP PF00291.25 gi|14521242|ref|NP_126717.1| - 8.2e-82 274.9 0.1 9.4e-82 274.7 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme GHMP_kinases_N PF00288.26 gi|14521243|ref|NP_126718.1| - 3.9e-15 55.8 1.3 8.7e-15 54.7 1.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|14521243|ref|NP_126718.1| - 1e-13 51.4 0.0 2.3e-13 50.3 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal AA_kinase PF00696.28 gi|14521244|ref|NP_126719.1| - 2.7e-45 154.9 0.0 3.5e-45 154.5 0.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family AA_kinase PF00696.28 gi|14521245|ref|NP_126720.1| - 2.6e-36 125.4 0.0 3.5e-36 125.0 0.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family AhpC-TSA PF00578.21 gi|14521246|ref|NP_126721.1| - 6.4e-31 106.9 0.0 9.1e-31 106.4 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|14521246|ref|NP_126721.1| - 1.8e-12 47.2 0.0 2.5e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|14521246|ref|NP_126721.1| - 5.8e-09 35.6 0.1 9.9e-09 34.9 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin PBP_like_2 PF12849.7 gi|14521247|ref|NP_126722.1| - 7.8e-57 193.1 0.1 9.4e-57 192.8 0.1 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|14521247|ref|NP_126722.1| - 3e-22 80.0 5.9 3.7e-22 79.7 5.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|14521247|ref|NP_126722.1| - 1.6e-06 27.4 0.0 2.9e-06 26.5 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain Asp_protease PF09668.10 gi|14521247|ref|NP_126722.1| - 0.027 14.3 0.0 0.15 11.9 0.0 2.0 2 0 0 2 2 2 0 Aspartyl protease Alk_phosphatase PF00245.20 gi|14521248|ref|NP_126723.1| - 6.5e-87 292.2 0.4 9.2e-87 291.7 0.4 1.2 1 0 0 1 1 1 1 Alkaline phosphatase Metalloenzyme PF01676.18 gi|14521248|ref|NP_126723.1| - 9.3e-11 41.6 0.5 3.1e-07 30.0 0.0 2.8 2 2 0 2 2 2 2 Metalloenzyme superfamily Sulfatase PF00884.23 gi|14521248|ref|NP_126723.1| - 0.00051 19.5 0.2 0.017 14.5 0.2 2.2 1 1 0 1 1 1 1 Sulfatase Dockerin_1 PF00404.18 gi|14521248|ref|NP_126723.1| - 0.0052 16.9 4.5 0.01 16.0 4.5 1.5 1 0 0 1 1 1 1 Dockerin type I domain Phosphodiest PF01663.22 gi|14521248|ref|NP_126723.1| - 0.022 14.3 0.0 0.033 13.8 0.0 1.3 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase AP_endonuc_2 PF01261.24 gi|14521249|ref|NP_126724.1| - 5.9e-14 52.0 0.1 7.8e-14 51.6 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AP_endonuc_2 PF01261.24 gi|14521250|ref|NP_126725.1| - 8.7e-07 28.6 0.0 1.5e-06 27.8 0.0 1.4 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel BPD_transp_1 PF00528.22 gi|14521251|ref|NP_126726.1| - 1.3e-11 44.6 21.5 1.3e-11 44.6 21.5 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component FxsA PF04186.13 gi|14521251|ref|NP_126726.1| - 0.43 10.7 0.0 0.43 10.7 0.0 3.4 4 1 0 4 4 4 0 FxsA cytoplasmic membrane protein BPD_transp_1 PF00528.22 gi|14521252|ref|NP_126727.1| - 7.9e-17 61.6 13.7 7.9e-17 61.6 13.7 2.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|14521253|ref|NP_126728.1| - 8.8e-33 113.7 0.0 1.2e-32 113.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521253|ref|NP_126728.1| - 1.1e-10 41.8 0.0 0.00016 21.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14521253|ref|NP_126728.1| - 3e-07 30.1 0.0 6.7e-07 29.0 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|14521253|ref|NP_126728.1| - 0.00019 21.3 0.0 0.15 11.7 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|14521253|ref|NP_126728.1| - 0.00028 20.6 0.0 0.00051 19.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|14521253|ref|NP_126728.1| - 0.0005 20.3 0.0 0.00081 19.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|14521253|ref|NP_126728.1| - 0.00064 20.3 0.0 0.00072 20.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|14521253|ref|NP_126728.1| - 0.0011 19.0 0.0 0.0024 17.8 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|14521253|ref|NP_126728.1| - 0.0043 17.4 0.0 0.0084 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 gi|14521253|ref|NP_126728.1| - 0.0058 16.6 0.0 0.0096 15.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|14521253|ref|NP_126728.1| - 0.0082 16.6 0.1 0.064 13.7 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 gi|14521253|ref|NP_126728.1| - 0.01 15.6 0.0 0.021 14.6 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Adeno_IVa2 PF02456.15 gi|14521253|ref|NP_126728.1| - 0.015 14.1 0.0 0.024 13.5 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_25 PF13481.6 gi|14521253|ref|NP_126728.1| - 0.021 14.4 0.0 0.072 12.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|14521253|ref|NP_126728.1| - 0.027 13.9 0.0 0.93 8.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 gi|14521253|ref|NP_126728.1| - 0.027 14.2 0.0 0.053 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|14521253|ref|NP_126728.1| - 0.033 14.2 0.0 0.067 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 gi|14521253|ref|NP_126728.1| - 0.04 13.1 0.1 0.086 12.0 0.1 1.6 1 1 0 1 1 1 0 NB-ARC domain AAA_18 PF13238.6 gi|14521253|ref|NP_126728.1| - 0.05 14.2 0.0 0.16 12.5 0.0 1.8 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 gi|14521253|ref|NP_126728.1| - 0.055 12.3 0.0 0.33 9.7 0.0 1.9 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_30 PF13604.6 gi|14521253|ref|NP_126728.1| - 0.078 12.7 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|14521253|ref|NP_126728.1| - 0.082 12.8 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea G-alpha PF00503.20 gi|14521253|ref|NP_126728.1| - 0.11 11.6 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_PrkA PF08298.11 gi|14521253|ref|NP_126728.1| - 0.13 11.2 0.1 0.29 10.0 0.0 1.5 2 0 0 2 2 2 0 PrkA AAA domain AAA_28 PF13521.6 gi|14521253|ref|NP_126728.1| - 0.13 12.5 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|14521253|ref|NP_126728.1| - 0.16 11.9 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 gi|14521253|ref|NP_126728.1| - 0.17 12.3 0.0 0.5 10.8 0.0 1.8 2 0 0 2 2 1 0 RNA helicase PhoU PF01895.19 gi|14521254|ref|NP_126729.1| - 0.00016 22.0 2.8 0.00017 22.0 1.1 1.9 2 0 0 2 2 2 1 PhoU domain PhoU PF01895.19 gi|14521255|ref|NP_126730.1| - 3.2e-19 69.2 4.3 4.6e-09 36.6 0.6 2.1 2 0 0 2 2 2 2 PhoU domain ATR13 PF16829.5 gi|14521255|ref|NP_126730.1| - 0.11 12.8 0.1 0.25 11.7 0.1 1.6 1 1 0 1 1 1 0 Avirulence protein ATR13, RxLR effector PIN PF01850.21 gi|14521256|ref|NP_126731.1| - 8.1e-23 81.2 1.7 1.1e-22 80.8 1.7 1.2 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|14521256|ref|NP_126731.1| - 0.023 15.2 1.1 0.044 14.3 1.1 1.4 1 1 0 1 1 1 0 PIN domain TBPIP PF07106.13 gi|14521256|ref|NP_126731.1| - 0.078 12.9 0.2 12 5.9 0.1 2.4 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain Glyco_hydro38C2 PF17677.1 gi|14521256|ref|NP_126731.1| - 0.18 11.9 1.2 0.29 11.3 1.2 1.5 1 1 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal beta sandwich domain MazE_antitoxin PF04014.18 gi|33356741|ref|NP_877655.1| - 7.1e-06 25.8 2.5 2.5e-05 24.1 2.5 1.9 1 1 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin MraZ PF02381.18 gi|33356741|ref|NP_877655.1| - 4.8e-05 23.3 0.0 6.6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like Rubrerythrin PF02915.17 gi|14521257|ref|NP_126732.1| - 4.3e-31 108.1 9.7 7.8e-31 107.3 9.7 1.5 1 0 0 1 1 1 1 Rubrerythrin DUF835 PF05763.12 gi|14521257|ref|NP_126732.1| - 6.3e-27 94.0 0.1 1.2e-26 93.1 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF835) Ferritin_2 PF13668.6 gi|14521257|ref|NP_126732.1| - 0.0015 18.7 0.7 0.0023 18.2 0.7 1.2 1 0 0 1 1 1 1 Ferritin-like domain Coat_F PF07875.12 gi|14521257|ref|NP_126732.1| - 0.021 15.0 3.7 0.097 12.9 0.0 2.7 3 0 0 3 3 3 0 Coat F domain DUF2383 PF09537.10 gi|14521257|ref|NP_126732.1| - 0.13 12.6 3.2 3.4 8.1 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2383) PS_pyruv_trans PF04230.13 gi|14521257|ref|NP_126732.1| - 0.48 10.3 2.7 1.8 8.4 0.3 2.2 1 1 0 2 2 2 0 Polysaccharide pyruvyl transferase DUF1657 PF07870.11 gi|14521257|ref|NP_126732.1| - 0.64 9.9 3.3 3 7.8 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) Gram_pos_anchor PF00746.21 gi|14521258|ref|NP_126733.1| - 0.039 13.9 2.3 0.15 12.0 0.0 2.4 2 0 0 2 2 2 0 LPXTG cell wall anchor motif ABC2_membrane_2 PF12679.7 gi|14521258|ref|NP_126733.1| - 0.58 9.4 11.2 1.3 8.2 11.2 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 gi|14521258|ref|NP_126733.1| - 0.95 9.1 5.9 1.3 8.6 1.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 gi|14521258|ref|NP_126733.1| - 2.7 8.1 9.8 15 5.6 0.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III ABC2_membrane_3 PF12698.7 gi|14521258|ref|NP_126733.1| - 3.8 6.5 11.7 5.4 6.0 11.7 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|14521259|ref|NP_126734.1| - 5.7e-10 38.9 9.0 1.1e-08 34.7 9.0 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|14521259|ref|NP_126734.1| - 0.00014 21.9 1.5 0.00015 21.7 1.5 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|14521259|ref|NP_126734.1| - 0.0097 15.5 1.9 0.0097 15.5 1.9 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|14521260|ref|NP_126735.1| - 7.8e-29 100.9 0.0 1.2e-28 100.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521260|ref|NP_126735.1| - 1.9e-11 44.3 0.0 3.5e-07 30.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|14521260|ref|NP_126735.1| - 0.0036 17.8 0.1 0.0068 16.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|14521260|ref|NP_126735.1| - 0.0046 16.7 0.0 1.2 8.8 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain SRP54 PF00448.22 gi|14521260|ref|NP_126735.1| - 0.031 13.9 0.1 0.13 11.9 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA PF00004.29 gi|14521260|ref|NP_126735.1| - 0.04 14.3 0.0 0.11 12.9 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|14521260|ref|NP_126735.1| - 0.042 14.1 0.0 0.13 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|14521260|ref|NP_126735.1| - 0.076 12.4 0.1 5.1 6.5 0.0 2.3 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|14521260|ref|NP_126735.1| - 0.17 11.6 0.4 0.28 10.9 0.4 1.5 1 1 0 1 1 1 0 AAA domain Lactamase_B PF00753.27 gi|14521261|ref|NP_126736.1| - 1e-27 97.5 0.5 1.4e-27 97.0 0.5 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|14521261|ref|NP_126736.1| - 4.8e-05 23.0 0.0 6.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Chordopox_A20R PF05941.13 gi|14521261|ref|NP_126736.1| - 0.0071 15.4 0.4 0.01 14.9 0.4 1.2 1 0 0 1 1 1 1 Chordopoxvirus A20R protein MJ1316 PF04457.12 gi|14521262|ref|NP_126737.1| - 2.1e-13 50.8 0.4 2.4e-13 50.6 0.4 1.0 1 0 0 1 1 1 1 MJ1316 RNA cyclic group end recognition domain SNase PF00565.17 gi|14521263|ref|NP_126738.1| - 3.9e-31 107.7 0.0 5.5e-31 107.2 0.0 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue eIF-1a PF01176.19 gi|14521263|ref|NP_126738.1| - 0.1 12.4 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 Translation initiation factor 1A / IF-1 TOBE PF03459.17 gi|14521263|ref|NP_126738.1| - 0.19 12.1 0.0 0.38 11.1 0.0 1.5 1 0 0 1 1 1 0 TOBE domain PGM_PMM_I PF02878.16 gi|14521265|ref|NP_126740.1| - 1.3e-47 161.0 0.0 2.6e-47 160.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|14521265|ref|NP_126740.1| - 4.3e-23 81.9 0.0 1.4e-22 80.2 0.0 1.9 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|14521265|ref|NP_126740.1| - 2.6e-19 69.5 0.0 5.3e-19 68.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|14521265|ref|NP_126740.1| - 1.1e-08 35.1 0.0 3.2e-08 33.6 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CinA_KH PF18146.1 gi|14521265|ref|NP_126740.1| - 0.049 13.8 0.0 0.16 12.1 0.0 1.9 1 0 0 1 1 1 0 Damage-inducible protein CinA KH domain DUF896 PF05979.12 gi|14521265|ref|NP_126740.1| - 0.069 13.0 0.1 24 4.9 0.0 3.2 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF896) BtpA PF03437.15 gi|14521266|ref|NP_126741.1| - 4.1e-101 337.7 0.0 4.6e-101 337.5 0.0 1.0 1 0 0 1 1 1 1 BtpA family PcrB PF01884.17 gi|14521266|ref|NP_126741.1| - 0.0027 17.2 0.1 0.021 14.3 0.1 2.0 1 1 1 2 2 2 2 PcrB family Bac_luciferase PF00296.20 gi|14521266|ref|NP_126741.1| - 0.14 11.6 0.0 1.6 8.0 0.0 2.4 2 2 0 2 2 2 0 Luciferase-like monooxygenase TatD_DNase PF01026.21 gi|14521267|ref|NP_126742.1| - 1.2e-60 205.1 0.2 1.3e-60 204.9 0.2 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|14521267|ref|NP_126742.1| - 0.00022 21.1 0.1 0.035 13.9 0.0 2.8 2 1 0 2 2 2 1 Amidohydrolase FliG_N PF14842.6 gi|14521267|ref|NP_126742.1| - 0.57 10.8 2.3 1.6 9.3 0.1 2.6 3 0 0 3 3 3 0 FliG N-terminal domain FeoA PF04023.14 gi|14521268|ref|NP_126743.1| - 1.3e-17 63.8 0.5 1.4e-17 63.7 0.5 1.0 1 0 0 1 1 1 1 FeoA domain FeoB_N PF02421.18 gi|14521269|ref|NP_126744.1| - 3.2e-64 215.2 0.9 5.8e-64 214.3 0.9 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|14521269|ref|NP_126744.1| - 9.3e-42 141.8 17.6 3.1e-29 101.5 2.3 2.8 3 0 0 3 3 2 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|14521269|ref|NP_126744.1| - 1.9e-19 69.8 1.0 3.2e-19 69.1 0.1 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|14521269|ref|NP_126744.1| - 2.2e-18 65.6 0.5 2.2e-18 65.6 0.5 2.5 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|14521269|ref|NP_126744.1| - 5.1e-18 65.4 4.1 2.1e-17 63.4 4.1 2.0 2 0 0 2 2 2 1 FeoB cytosolic helical domain SRPRB PF09439.10 gi|14521269|ref|NP_126744.1| - 2.1e-08 33.8 1.1 1.4e-06 27.9 0.1 2.3 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|14521269|ref|NP_126744.1| - 2.8e-07 30.6 0.3 0.00078 19.4 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase ATP_bind_1 PF03029.17 gi|14521269|ref|NP_126744.1| - 0.00064 19.6 0.8 0.0052 16.6 0.2 2.4 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|14521269|ref|NP_126744.1| - 0.0023 17.5 0.3 0.038 13.5 0.1 2.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 gi|14521269|ref|NP_126744.1| - 0.0048 16.7 0.1 0.046 13.5 0.1 2.6 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AIG1 PF04548.16 gi|14521269|ref|NP_126744.1| - 0.029 13.7 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 AIG1 family Ras PF00071.22 gi|14521269|ref|NP_126744.1| - 0.035 13.7 0.2 0.26 10.9 0.0 2.4 2 1 0 2 2 2 0 Ras family MMR_HSR1_Xtn PF16897.5 gi|14521269|ref|NP_126744.1| - 0.058 13.4 0.9 0.15 12.1 0.1 2.0 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain Roc PF08477.13 gi|14521269|ref|NP_126744.1| - 0.13 12.5 0.1 0.28 11.4 0.1 1.7 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 gi|14521269|ref|NP_126744.1| - 0.16 12.5 0.2 0.43 11.1 0.0 1.7 2 0 0 2 2 2 0 ABC transporter Dynamin_N PF00350.23 gi|14521269|ref|NP_126744.1| - 0.18 11.9 0.1 5.9 6.9 0.0 2.6 3 0 0 3 3 3 0 Dynamin family VARLMGL PF14383.6 gi|14521269|ref|NP_126744.1| - 0.22 11.1 0.1 0.42 10.2 0.1 1.5 1 0 0 1 1 1 0 DUF761-associated sequence motif FMN_dh PF01070.18 gi|14521271|ref|NP_126746.1| - 2.5e-29 102.4 0.4 1.9e-19 69.9 1.4 2.1 1 1 0 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|14521271|ref|NP_126746.1| - 1.1e-05 24.6 6.7 0.0051 15.9 4.9 3.3 1 1 1 2 2 2 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|14521271|ref|NP_126746.1| - 1.2e-05 24.7 1.9 2e-05 23.9 0.8 1.9 2 1 0 2 2 2 1 Conserved region in glutamate synthase DUF561 PF04481.12 gi|14521271|ref|NP_126746.1| - 3.7e-05 23.0 0.7 0.00044 19.5 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF561) NMO PF03060.15 gi|14521271|ref|NP_126746.1| - 0.00063 19.2 1.9 0.00078 18.9 0.9 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|14521271|ref|NP_126746.1| - 0.14 11.4 0.1 0.47 9.6 0.1 1.8 3 0 0 3 3 3 0 Dihydroorotate dehydrogenase HTH_17 PF12728.7 gi|14521273|ref|NP_126748.1| - 0.059 13.6 2.9 0.29 11.4 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain Halogen_Hydrol PF10112.9 gi|14521273|ref|NP_126748.1| - 0.14 12.1 3.5 0.22 11.5 3.5 1.3 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein UNC-79 PF14776.6 gi|14521274|ref|NP_126749.1| - 0.36 9.5 0.8 0.51 9.0 0.8 1.2 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 DUF512 PF04459.12 gi|14521275|ref|NP_126750.1| - 1.7e-12 47.0 0.0 1.5e-11 43.9 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF512) Radical_SAM PF04055.21 gi|14521275|ref|NP_126750.1| - 1.9e-06 28.3 5.8 5.4e-06 26.9 0.3 2.7 2 1 1 3 3 3 2 Radical SAM superfamily Radical_SAM PF04055.21 gi|14521276|ref|NP_126751.1| - 2.7e-15 57.1 0.9 1.1e-14 55.1 0.0 2.4 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|14521276|ref|NP_126751.1| - 5.9e-08 32.9 0.0 1.1e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|14521276|ref|NP_126751.1| - 8.7e-06 26.0 0.0 2.7e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fe_dep_repr_C PF02742.15 gi|14521277|ref|NP_126752.1| - 1.2e-21 76.6 0.2 2.3e-21 75.6 0.1 1.5 1 1 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|14521277|ref|NP_126752.1| - 9.5e-18 64.2 1.6 1.8e-17 63.3 1.6 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|14521277|ref|NP_126752.1| - 7.7e-09 35.3 0.0 1.6e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|14521277|ref|NP_126752.1| - 1.1e-06 28.4 0.0 2.2e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|14521277|ref|NP_126752.1| - 2.6e-05 24.0 0.0 4.6e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|14521277|ref|NP_126752.1| - 4.6e-05 23.2 0.5 8.1e-05 22.4 0.5 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|14521277|ref|NP_126752.1| - 7.5e-05 22.6 0.0 0.00014 21.8 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|14521277|ref|NP_126752.1| - 0.00023 20.7 0.1 0.00043 19.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|14521277|ref|NP_126752.1| - 0.00023 21.4 0.1 0.00043 20.6 0.1 1.6 1 0 0 1 1 1 1 Transcriptional regulator DUF2250 PF10007.9 gi|14521277|ref|NP_126752.1| - 0.00039 20.5 1.6 0.00039 20.5 1.6 1.5 2 0 0 2 2 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_27 PF13463.6 gi|14521277|ref|NP_126752.1| - 0.00045 20.6 0.1 0.0011 19.4 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_micro PF17007.5 gi|14521277|ref|NP_126752.1| - 0.00092 18.1 1.0 0.0016 17.4 1.0 1.4 1 0 0 1 1 1 1 HTH-like Mrr_N PF14338.6 gi|14521277|ref|NP_126752.1| - 0.0018 18.4 0.9 0.028 14.5 0.0 2.5 2 1 0 2 2 2 1 Mrr N-terminal domain TFIIE_alpha PF02002.17 gi|14521277|ref|NP_126752.1| - 0.0036 17.1 0.8 0.0036 17.1 0.8 2.1 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_36 PF13730.6 gi|14521277|ref|NP_126752.1| - 0.0045 16.9 0.0 0.0093 15.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|14521277|ref|NP_126752.1| - 0.0048 16.7 0.1 0.025 14.4 0.1 2.2 2 1 0 2 2 2 1 LexA DNA binding domain AbiEi_4 PF13338.6 gi|14521277|ref|NP_126752.1| - 0.0053 16.9 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin DUF4423 PF14394.6 gi|14521277|ref|NP_126752.1| - 0.0066 16.2 0.4 0.013 15.3 0.4 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) FANCI_S3 PF14677.6 gi|14521277|ref|NP_126752.1| - 0.0074 16.0 0.1 0.012 15.4 0.1 1.5 1 0 0 1 1 1 1 FANCI solenoid 3 HTH_23 PF13384.6 gi|14521277|ref|NP_126752.1| - 0.0083 15.9 0.0 0.084 12.7 0.0 2.3 2 0 0 2 2 2 1 Homeodomain-like domain DUF505 PF04458.12 gi|14521277|ref|NP_126752.1| - 0.012 14.0 0.3 0.012 14.0 0.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF505) IF2_N PF04760.15 gi|14521277|ref|NP_126752.1| - 0.017 14.9 0.1 0.046 13.5 0.1 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region GntR PF00392.21 gi|14521277|ref|NP_126752.1| - 0.022 14.4 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4364 PF14277.6 gi|14521277|ref|NP_126752.1| - 0.024 14.4 0.4 0.14 11.9 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) Penicillinase_R PF03965.16 gi|14521277|ref|NP_126752.1| - 0.033 14.5 0.7 0.072 13.4 0.2 1.8 2 0 0 2 2 2 0 Penicillinase repressor HTH_29 PF13551.6 gi|14521277|ref|NP_126752.1| - 0.042 13.9 0.0 0.11 12.5 0.0 1.7 2 0 0 2 2 1 0 Winged helix-turn helix B-block_TFIIIC PF04182.12 gi|14521277|ref|NP_126752.1| - 0.043 14.0 0.1 0.069 13.3 0.1 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HxlR PF01638.17 gi|14521277|ref|NP_126752.1| - 0.064 13.1 0.3 0.17 11.7 0.1 1.7 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|14521277|ref|NP_126752.1| - 0.17 11.7 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Xan_ur_permease PF00860.20 gi|14521278|ref|NP_126753.1| - 1.4e-41 142.5 38.2 1.8e-41 142.2 38.2 1.2 1 0 0 1 1 1 1 Permease family Sulfate_transp PF00916.20 gi|14521278|ref|NP_126753.1| - 0.00019 20.3 21.2 0.00051 18.9 21.2 1.8 1 1 0 1 1 1 1 Sulfate permease family PNP_UDP_1 PF01048.20 gi|14521279|ref|NP_126754.1| - 1.7e-53 181.3 0.1 1.9e-53 181.1 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily PMT_2 PF13231.6 gi|14521280|ref|NP_126755.1| - 0.00027 21.2 20.4 0.00027 21.2 20.4 3.0 3 2 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Mannosyl_trans4 PF15971.5 gi|14521280|ref|NP_126755.1| - 0.0074 16.1 3.4 0.017 15.0 3.4 1.6 1 0 0 1 1 1 1 DolP-mannose mannosyltransferase EpsG PF14897.6 gi|14521280|ref|NP_126755.1| - 0.085 12.2 29.8 0.13 11.6 29.8 1.3 1 0 0 1 1 1 0 EpsG family Oxidored_q5_N PF01059.17 gi|14521280|ref|NP_126755.1| - 0.31 11.1 19.2 0.56 10.3 5.3 3.0 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Amidohydro_3 PF07969.11 gi|14521281|ref|NP_126756.1| - 1.4e-85 288.6 0.0 1.6e-85 288.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|14521281|ref|NP_126756.1| - 9e-10 38.4 0.0 3.3e-07 30.0 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family TPP_enzyme_C PF02775.21 gi|14521282|ref|NP_126757.1| - 3.1e-32 111.5 0.7 4.7e-32 110.9 0.1 1.6 2 0 0 2 2 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|14521282|ref|NP_126757.1| - 3.4e-14 53.2 0.0 5.6e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|14521282|ref|NP_126757.1| - 1.3e-09 37.5 12.5 4e-06 26.4 3.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|14521282|ref|NP_126757.1| - 5.3e-06 26.2 13.1 0.00047 20.1 1.0 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14521282|ref|NP_126757.1| - 7.3e-06 26.0 10.4 2.3e-05 24.4 10.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14521282|ref|NP_126757.1| - 5.9e-05 23.1 8.4 0.00013 22.1 8.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14521282|ref|NP_126757.1| - 0.00016 22.2 9.4 0.001 19.6 9.5 2.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521282|ref|NP_126757.1| - 0.00019 21.5 7.8 0.0016 18.5 0.5 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Transket_pyr PF02779.24 gi|14521282|ref|NP_126757.1| - 0.0003 20.5 0.0 1.1 8.8 0.0 3.1 3 0 0 3 3 3 2 Transketolase, pyrimidine binding domain Fer4_6 PF12837.7 gi|14521282|ref|NP_126757.1| - 0.011 15.8 15.7 0.015 15.3 2.3 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain DXP_synthase_N PF13292.6 gi|14521282|ref|NP_126757.1| - 0.053 12.7 0.2 3.3 6.8 0.0 2.2 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase PFOR_II PF17147.4 gi|14521282|ref|NP_126757.1| - 0.11 12.8 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_8 PF13183.6 gi|14521282|ref|NP_126757.1| - 0.34 11.4 5.2 4.1 7.9 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|14521282|ref|NP_126757.1| - 0.49 11.0 6.5 1.4 9.5 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14521282|ref|NP_126757.1| - 0.89 10.3 8.9 0.68 10.7 1.1 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|14521282|ref|NP_126757.1| - 0.92 10.5 11.8 0.075 14.0 1.6 2.6 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|14521282|ref|NP_126757.1| - 1.5 9.9 12.9 0.48 11.5 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|14521282|ref|NP_126757.1| - 1.9 9.2 10.2 2.8 8.7 1.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|14521282|ref|NP_126757.1| - 3.4 8.3 9.0 5.5 7.6 1.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I tRNA_U5-meth_tr PF05958.11 gi|14521283|ref|NP_126758.1| - 2e-19 69.8 0.1 9.9e-17 61.0 0.1 2.3 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 gi|14521283|ref|NP_126758.1| - 4.1e-09 36.2 0.0 6.7e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 gi|14521283|ref|NP_126758.1| - 3e-06 27.1 1.1 4.4e-06 26.6 0.1 1.8 2 0 0 2 2 2 1 Met-10+ like-protein PrmA PF06325.13 gi|14521283|ref|NP_126758.1| - 3.6e-06 26.6 0.1 6.2e-06 25.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|14521283|ref|NP_126758.1| - 7.3e-06 26.6 0.0 2.5e-05 24.9 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|14521283|ref|NP_126758.1| - 1.2e-05 24.8 0.0 1.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_31 PF13847.6 gi|14521283|ref|NP_126758.1| - 0.00023 21.0 0.0 0.00038 20.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|14521283|ref|NP_126758.1| - 0.00029 20.5 0.0 0.00055 19.6 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 gi|14521283|ref|NP_126758.1| - 0.00058 19.7 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521283|ref|NP_126758.1| - 0.0074 15.9 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_16 PF10294.9 gi|14521283|ref|NP_126758.1| - 0.016 15.0 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Ribosomal_S13 PF00416.22 gi|14521283|ref|NP_126758.1| - 0.087 13.2 0.0 0.25 11.7 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein S13/S18 Methyltransf_11 PF08241.12 gi|14521283|ref|NP_126758.1| - 0.092 13.4 0.2 0.48 11.1 0.0 2.3 3 1 0 3 3 3 0 Methyltransferase domain Calx-beta PF03160.14 gi|14521283|ref|NP_126758.1| - 0.12 12.5 0.2 0.34 11.1 0.0 1.8 2 0 0 2 2 2 0 Calx-beta domain 4HBT PF03061.22 gi|14521284|ref|NP_126759.1| - 1.2e-08 35.2 0.0 2.2e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 Thioesterase superfamily MaoC_dehydratas PF01575.19 gi|14521284|ref|NP_126759.1| - 2.1e-07 30.5 0.1 3e-07 30.0 0.1 1.2 1 0 0 1 1 1 1 MaoC like domain 4HBT_3 PF13622.6 gi|14521284|ref|NP_126759.1| - 0.0019 18.5 0.0 0.0024 18.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily MaoC_dehydrat_N PF13452.6 gi|14521284|ref|NP_126759.1| - 0.028 14.6 0.0 0.099 12.8 0.0 1.8 1 1 0 1 1 1 0 N-terminal half of MaoC dehydratase 4HBT_2 PF13279.6 gi|14521284|ref|NP_126759.1| - 0.099 13.1 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF2240 PF09999.9 gi|14521285|ref|NP_126760.1| - 1.7e-09 37.4 0.0 1.6e-07 31.0 0.0 2.0 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Swi5 PF07061.11 gi|14521285|ref|NP_126760.1| - 0.03 14.4 1.3 0.048 13.7 1.3 1.4 1 0 0 1 1 1 0 Swi5 DUF3216 PF11505.8 gi|14521286|ref|NP_126761.1| - 2.1e-29 101.6 2.8 4.8e-29 100.4 2.8 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3216) Methyltransf_11 PF08241.12 gi|14521286|ref|NP_126761.1| - 1.1e-18 67.7 0.0 2.9e-18 66.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521286|ref|NP_126761.1| - 1.8e-14 53.9 0.0 2.7e-14 53.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521286|ref|NP_126761.1| - 8e-12 45.7 0.0 2.2e-11 44.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521286|ref|NP_126761.1| - 8.8e-08 31.8 0.0 1.7e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|14521286|ref|NP_126761.1| - 7.1e-07 29.9 0.0 1.5e-06 28.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14521286|ref|NP_126761.1| - 8.1e-06 25.7 0.0 1.4e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|14521286|ref|NP_126761.1| - 0.00034 20.3 0.0 0.00088 18.9 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 gi|14521286|ref|NP_126761.1| - 0.0037 17.1 0.0 0.006 16.5 0.0 1.4 1 0 0 1 1 1 1 Hypothetical methyltransferase N6_N4_Mtase PF01555.18 gi|14521286|ref|NP_126761.1| - 0.04 13.6 1.5 0.05 13.3 0.1 1.8 2 1 0 2 2 2 0 DNA methylase GTP-bdg_N PF13167.6 gi|14521287|ref|NP_126762.1| - 2.7e-22 79.2 0.2 2.1e-21 76.4 0.0 2.6 3 0 0 3 3 2 1 GTP-binding GTPase N-terminal MMR_HSR1 PF01926.23 gi|14521287|ref|NP_126762.1| - 4.7e-20 71.8 0.0 1.3e-19 70.3 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|14521287|ref|NP_126762.1| - 8.1e-20 71.2 4.2 2.3e-19 69.8 4.2 1.8 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region FeoB_N PF02421.18 gi|14521287|ref|NP_126762.1| - 4.1e-12 45.9 0.0 9.5e-12 44.7 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|14521287|ref|NP_126762.1| - 1.5e-06 27.9 0.0 5.1e-05 22.9 0.0 2.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 gi|14521287|ref|NP_126762.1| - 2.6e-06 27.4 0.4 0.041 13.8 0.0 2.8 3 0 0 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 gi|14521287|ref|NP_126762.1| - 1.2e-05 25.5 0.4 0.0051 16.9 0.0 2.9 2 1 0 3 3 3 1 Dynamin family ATP_bind_1 PF03029.17 gi|14521287|ref|NP_126762.1| - 0.00041 20.2 0.3 0.0053 16.6 0.1 2.2 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|14521287|ref|NP_126762.1| - 0.00077 19.1 0.8 0.096 12.3 0.1 2.6 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 gi|14521287|ref|NP_126762.1| - 0.0016 18.9 0.0 0.0051 17.3 0.0 1.9 1 1 0 1 1 1 1 ABC transporter PduV-EutP PF10662.9 gi|14521287|ref|NP_126762.1| - 0.0048 16.7 0.2 1.3 8.8 0.0 2.9 3 0 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 gi|14521287|ref|NP_126762.1| - 0.015 14.8 0.1 0.035 13.6 0.1 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Roc PF08477.13 gi|14521287|ref|NP_126762.1| - 0.043 14.0 0.0 0.38 11.0 0.0 2.2 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase GBP PF02263.19 gi|14521287|ref|NP_126762.1| - 0.062 12.5 0.1 1 8.6 0.0 2.2 2 0 0 2 2 2 0 Guanylate-binding protein, N-terminal domain MMR_HSR1_Xtn PF16897.5 gi|14521287|ref|NP_126762.1| - 0.068 13.2 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain ZnuA PF01297.17 gi|14521287|ref|NP_126762.1| - 0.08 12.3 0.0 1.4 8.2 0.0 2.3 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic TusA PF01206.17 gi|14521287|ref|NP_126762.1| - 0.097 12.5 0.2 8.5 6.3 0.0 3.2 4 0 0 4 4 4 0 Sulfurtransferase TusA AAA_29 PF13555.6 gi|14521287|ref|NP_126762.1| - 0.15 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain PHO4 PF01384.20 gi|14521288|ref|NP_126763.1| - 1.1e-66 225.2 36.0 5e-66 223.1 36.0 1.8 1 1 0 1 1 1 1 Phosphate transporter family T_cell_tran_alt PF15128.6 gi|14521288|ref|NP_126763.1| - 1.7 8.5 4.3 3.5 7.5 0.0 2.9 3 0 0 3 3 3 0 T-cell leukemia translocation-altered Thioredoxin_2 PF13098.6 gi|14521289|ref|NP_126764.1| - 1.4e-06 28.7 0.2 4e-06 27.2 0.2 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|14521289|ref|NP_126764.1| - 3e-05 24.2 0.1 7.5e-05 22.9 0.0 1.7 2 0 0 2 2 2 1 Glutaredoxin Thioredoxin_3 PF13192.6 gi|14521289|ref|NP_126764.1| - 0.0038 17.3 0.0 0.047 13.7 0.0 2.2 1 1 1 2 2 2 1 Thioredoxin domain Thioredoxin PF00085.20 gi|14521289|ref|NP_126764.1| - 0.007 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 gi|14521289|ref|NP_126764.1| - 0.092 12.9 0.0 0.23 11.6 0.0 1.6 1 1 1 2 2 2 0 Thioredoxin FANCL_C PF11793.8 gi|14521289|ref|NP_126764.1| - 0.15 12.3 0.1 0.29 11.3 0.1 1.4 1 0 0 1 1 1 0 FANCL C-terminal domain Gemini_V2 PF01524.17 gi|14521290|ref|NP_126765.1| - 0.12 12.6 0.0 0.33 11.2 0.0 1.7 2 0 0 2 2 2 0 Geminivirus V2 protein Peptidase_M20 PF01546.28 gi|14521292|ref|NP_126767.1| - 2.3e-25 89.5 0.1 3.3e-25 89.0 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|14521292|ref|NP_126767.1| - 5.4e-10 39.1 0.0 1.5e-09 37.7 0.0 1.8 1 1 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|14521292|ref|NP_126767.1| - 7.9e-10 38.2 0.0 3.6e-06 26.2 0.0 2.5 3 0 0 3 3 3 2 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 gi|14521292|ref|NP_126767.1| - 3.4e-07 30.2 0.0 4.3e-06 26.5 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 MFS_1 PF07690.16 gi|14521293|ref|NP_126768.1| - 6.5e-30 104.2 38.0 4.3e-19 68.7 14.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|14521293|ref|NP_126768.1| - 3.4e-22 78.6 16.2 4.1e-22 78.3 16.2 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.6 gi|14521293|ref|NP_126768.1| - 3.9e-10 38.9 32.1 6.4e-09 34.9 10.1 2.3 2 1 0 2 2 2 2 MFS/sugar transport protein Phos_pyr_kin PF08543.12 gi|14521294|ref|NP_126769.1| - 2.1e-94 315.5 2.6 2.5e-94 315.2 2.6 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|14521294|ref|NP_126769.1| - 4.1e-64 215.2 0.3 1.1e-63 213.7 0.1 1.9 2 0 0 2 2 2 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|14521294|ref|NP_126769.1| - 1.2e-14 54.4 0.3 3.4e-14 52.8 0.1 1.6 1 1 1 2 2 2 1 pfkB family carbohydrate kinase HK PF02110.15 gi|14521294|ref|NP_126769.1| - 0.0018 17.7 1.8 0.003 17.0 1.8 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Carb_kinase PF01256.17 gi|14521294|ref|NP_126769.1| - 0.04 13.4 2.5 0.083 12.4 2.5 1.4 1 1 0 1 1 1 0 Carbohydrate kinase TMP-TENI PF02581.17 gi|14521295|ref|NP_126770.1| - 4.1e-65 218.5 0.9 5.1e-65 218.2 0.9 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase NMO PF03060.15 gi|14521295|ref|NP_126770.1| - 6.7e-10 38.9 1.6 9.5e-10 38.4 1.6 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 gi|14521295|ref|NP_126770.1| - 5.4e-06 26.0 1.9 0.0011 18.5 0.8 2.2 1 1 0 2 2 2 2 Histidine biosynthesis protein QRPTase_C PF01729.19 gi|14521295|ref|NP_126770.1| - 0.00091 19.0 0.9 0.0043 16.9 0.2 2.1 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain NanE PF04131.14 gi|14521295|ref|NP_126770.1| - 0.001 18.3 0.6 0.0017 17.6 0.4 1.4 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.12 gi|14521295|ref|NP_126770.1| - 0.0012 18.1 1.9 0.0016 17.7 0.8 1.8 2 1 1 3 3 3 1 Protein of unknown function (DUF561) ThiG PF05690.14 gi|14521295|ref|NP_126770.1| - 0.0018 17.6 0.5 0.0031 16.9 0.5 1.5 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG FlpD PF02662.16 gi|14521295|ref|NP_126770.1| - 0.0036 17.3 0.6 0.013 15.5 0.1 2.2 2 1 0 2 2 2 1 Methyl-viologen-reducing hydrogenase, delta subunit Ribul_P_3_epim PF00834.19 gi|14521295|ref|NP_126770.1| - 0.0052 16.2 1.3 0.014 14.8 1.0 1.9 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family IGPS PF00218.21 gi|14521295|ref|NP_126770.1| - 0.0094 15.1 0.3 0.018 14.2 0.3 1.5 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase SOR_SNZ PF01680.17 gi|14521295|ref|NP_126770.1| - 0.017 14.9 3.2 0.027 14.3 1.3 2.0 2 1 0 2 2 2 0 SOR/SNZ family Dus PF01207.17 gi|14521295|ref|NP_126770.1| - 0.049 12.7 0.1 0.085 11.9 0.1 1.4 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) HK PF02110.15 gi|14521296|ref|NP_126771.1| - 1.3e-79 267.1 0.2 1.5e-79 266.9 0.2 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Carb_kinase PF01256.17 gi|14521296|ref|NP_126771.1| - 2.9e-10 40.0 0.4 3.7e-10 39.7 0.4 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 gi|14521296|ref|NP_126771.1| - 0.00012 21.5 0.3 0.0002 20.9 0.3 1.3 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|14521296|ref|NP_126771.1| - 0.00033 20.1 0.0 0.00051 19.4 0.0 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Transp_cyt_pur PF02133.15 gi|14521297|ref|NP_126772.1| - 1.6e-33 116.2 28.7 2.6e-33 115.5 27.9 1.7 1 1 1 2 2 2 1 Permease for cytosine/purines, uracil, thiamine, allantoin TENA_THI-4 PF03070.16 gi|14521298|ref|NP_126773.1| - 3.7e-36 124.9 2.7 4.3e-36 124.7 2.7 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family TENA_THI-4 PF03070.16 gi|14521299|ref|NP_126774.1| - 2e-46 158.5 0.1 2.3e-46 158.3 0.1 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family DUF257 PF03192.13 gi|14521300|ref|NP_126775.1| - 7e-59 199.1 2.0 8.6e-59 198.8 2.0 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 DUF257 PF03192.13 gi|14521301|ref|NP_126776.1| - 2.2e-54 184.4 2.3 2.4e-54 184.3 2.3 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 GCV_T PF01571.21 gi|14521302|ref|NP_126777.1| - 9.2e-101 336.5 0.0 1.1e-100 336.3 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|14521302|ref|NP_126777.1| - 1.9e-22 79.0 0.0 3.3e-22 78.2 0.0 1.4 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Peptidase_M24 PF00557.24 gi|14521304|ref|NP_126779.1| - 1.4e-72 243.7 1.2 2.1e-72 243.2 1.2 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|14521304|ref|NP_126779.1| - 4.2e-21 76.0 0.0 6.9e-21 75.3 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Creatinase_N_2 PF16189.5 gi|14521304|ref|NP_126779.1| - 0.00024 21.2 0.0 0.00086 19.4 0.0 1.9 1 1 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Germane PF10646.9 gi|14521304|ref|NP_126779.1| - 0.068 14.0 0.0 0.15 12.8 0.0 1.7 1 0 0 1 1 1 0 Sporulation and spore germination Amdase PF17645.1 gi|14521305|ref|NP_126780.1| - 3.8e-37 128.0 0.0 4.9e-37 127.7 0.0 1.0 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 gi|14521305|ref|NP_126780.1| - 7.8e-15 55.3 0.0 9.7e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Lactamase_B_2 PF12706.7 gi|14521306|ref|NP_126781.1| - 7.4e-18 64.8 0.0 3.9e-09 36.3 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14521306|ref|NP_126781.1| - 2e-12 47.5 0.0 1.2e-11 45.0 0.0 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|14521306|ref|NP_126781.1| - 0.00028 20.5 0.0 0.00072 19.2 0.0 1.6 2 0 0 2 2 2 1 tRNase Z endonuclease TraB PF01963.17 gi|14521307|ref|NP_126782.1| - 4.1e-17 63.0 0.1 6.6e-15 55.7 0.1 2.2 1 1 0 1 1 1 1 TraB family Steroid_dh PF02544.16 gi|14521308|ref|NP_126783.1| - 0.067 13.2 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase Pribosyltran PF00156.27 gi|14521309|ref|NP_126784.1| - 2.5e-24 85.6 0.4 3.1e-24 85.3 0.4 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|14521309|ref|NP_126784.1| - 0.00023 20.7 0.0 0.00033 20.2 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase DUF2529 PF10740.9 gi|14521309|ref|NP_126784.1| - 0.0041 16.8 0.0 0.0076 15.9 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF2529) PDZ_6 PF17820.1 gi|14521309|ref|NP_126784.1| - 0.067 13.1 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 PDZ domain GTP_EFTU_D2 PF03144.25 gi|14521309|ref|NP_126784.1| - 0.072 13.5 0.8 0.2 12.0 0.5 1.8 2 0 0 2 2 2 0 Elongation factor Tu domain 2 DUF520 PF04461.13 gi|14521309|ref|NP_126784.1| - 0.091 12.9 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF520) CMAS PF02353.20 gi|14521309|ref|NP_126784.1| - 0.24 10.6 0.0 0.31 10.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ribosomal_L21e PF01157.18 gi|14521310|ref|NP_126785.1| - 1.4e-35 121.2 1.3 1.5e-35 121.0 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|14521311|ref|NP_126786.1| - 3.7e-10 40.2 1.6 4.8e-10 39.8 1.6 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 PepSY PF03413.19 gi|14521311|ref|NP_126786.1| - 0.088 13.4 1.9 4.9 7.8 0.1 2.3 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain CTP-dep_RFKase PF01982.16 gi|14521313|ref|NP_126788.1| - 0.0096 16.0 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF120 PcrB PF01884.17 gi|14521314|ref|NP_126789.1| - 6.1e-64 215.6 0.0 8.1e-64 215.2 0.0 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|14521314|ref|NP_126789.1| - 3.1e-08 33.4 0.0 2.1e-07 30.6 0.0 2.0 2 0 0 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.14 gi|14521314|ref|NP_126789.1| - 1.4e-06 27.9 0.8 0.0007 19.0 0.1 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.20 gi|14521314|ref|NP_126789.1| - 2.7e-06 26.4 0.1 8.6e-05 21.5 0.1 2.1 2 0 0 2 2 2 1 Tryptophan synthase alpha chain G3P_antiterm PF04309.12 gi|14521314|ref|NP_126789.1| - 4.1e-05 23.1 0.1 0.00017 21.1 0.1 1.9 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator DHO_dh PF01180.21 gi|14521314|ref|NP_126789.1| - 4.9e-05 22.7 0.1 0.00014 21.2 0.1 1.6 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 gi|14521314|ref|NP_126789.1| - 0.00027 20.1 0.0 0.016 14.2 0.0 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain DapB_N PF01113.20 gi|14521314|ref|NP_126789.1| - 0.00044 20.4 0.1 0.0044 17.1 0.0 2.0 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NMO PF03060.15 gi|14521314|ref|NP_126789.1| - 0.007 15.8 0.2 0.017 14.5 0.0 1.7 2 0 0 2 2 2 1 Nitronate monooxygenase TMP-TENI PF02581.17 gi|14521314|ref|NP_126789.1| - 0.0099 15.2 0.1 0.043 13.1 0.0 1.9 2 0 0 2 2 2 1 Thiamine monophosphate synthase NanE PF04131.14 gi|14521314|ref|NP_126789.1| - 0.012 14.9 0.2 0.43 9.8 0.1 2.1 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.19 gi|14521314|ref|NP_126789.1| - 0.018 14.4 0.4 0.037 13.4 0.4 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|14521314|ref|NP_126789.1| - 0.032 14.0 0.4 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain FMN_dh PF01070.18 gi|14521314|ref|NP_126789.1| - 0.05 12.6 0.4 0.098 11.7 0.1 1.5 2 0 0 2 2 2 0 FMN-dependent dehydrogenase IGPS PF00218.21 gi|14521314|ref|NP_126789.1| - 0.077 12.1 0.3 0.19 10.9 0.0 1.7 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase NAD_binding_7 PF13241.6 gi|14521314|ref|NP_126789.1| - 0.093 13.2 0.2 0.77 10.2 0.1 2.0 2 0 0 2 2 2 0 Putative NAD(P)-binding BATS PF06968.13 gi|14521314|ref|NP_126789.1| - 0.13 12.4 0.1 5.4 7.2 0.0 2.3 2 0 0 2 2 2 0 Biotin and Thiamin Synthesis associated domain DUF362 PF04015.12 gi|14521314|ref|NP_126789.1| - 0.13 12.5 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF362) T2SSE PF00437.20 gi|14521315|ref|NP_126790.1| - 9.3e-10 38.0 0.0 2.1e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 Type II/IV secretion system protein PIN PF01850.21 gi|14521315|ref|NP_126790.1| - 6.2e-08 33.2 0.7 1.8e-07 31.7 0.1 2.1 2 0 0 2 2 1 1 PIN domain PIN_9 PF18477.1 gi|14521315|ref|NP_126790.1| - 7.5e-06 26.3 3.0 0.001 19.4 3.0 2.8 1 1 0 1 1 1 1 PIN like domain KH_1 PF00013.29 gi|14521315|ref|NP_126790.1| - 3.1e-05 23.7 0.3 0.00014 21.7 0.3 2.1 1 0 0 1 1 1 1 KH domain AAA_16 PF13191.6 gi|14521315|ref|NP_126790.1| - 0.00028 21.3 0.0 0.002 18.6 0.0 2.3 3 0 0 3 3 3 1 AAA ATPase domain AAA_18 PF13238.6 gi|14521315|ref|NP_126790.1| - 0.00032 21.3 0.0 0.0015 19.1 0.0 2.2 1 0 0 1 1 1 1 AAA domain KH_2 PF07650.17 gi|14521315|ref|NP_126790.1| - 0.00034 20.4 7.6 0.00077 19.2 2.0 3.0 2 0 0 2 2 2 1 KH domain Thymidylate_kin PF02223.17 gi|14521315|ref|NP_126790.1| - 0.00059 19.6 0.0 0.0024 17.6 0.0 2.1 1 1 0 1 1 1 1 Thymidylate kinase ATP_bind_1 PF03029.17 gi|14521315|ref|NP_126790.1| - 0.00087 19.1 0.0 0.0019 18.1 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 gi|14521315|ref|NP_126790.1| - 0.0011 19.3 0.1 0.0066 16.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain PIN_4 PF13638.6 gi|14521315|ref|NP_126790.1| - 0.0013 19.0 0.1 0.0034 17.7 0.1 1.7 1 0 0 1 1 1 1 PIN domain AAA_30 PF13604.6 gi|14521315|ref|NP_126790.1| - 0.0014 18.4 0.1 0.0096 15.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|14521315|ref|NP_126790.1| - 0.0027 17.7 0.0 0.0057 16.6 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 gi|14521315|ref|NP_126790.1| - 0.0049 17.3 0.0 0.013 15.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|14521315|ref|NP_126790.1| - 0.005 17.0 0.1 0.06 13.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|14521315|ref|NP_126790.1| - 0.01 16.4 0.0 0.035 14.6 0.0 2.0 1 0 0 1 1 1 0 ABC transporter TsaE PF02367.17 gi|14521315|ref|NP_126790.1| - 0.01 15.8 0.0 0.028 14.4 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 gi|14521315|ref|NP_126790.1| - 0.012 15.7 0.0 0.051 13.6 0.0 2.1 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|14521315|ref|NP_126790.1| - 0.014 15.3 1.3 0.037 13.9 0.0 2.5 3 0 0 3 3 2 0 NTPase AAA_5 PF07728.14 gi|14521315|ref|NP_126790.1| - 0.014 15.4 0.0 0.034 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 gi|14521315|ref|NP_126790.1| - 0.014 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RuvB_N PF05496.12 gi|14521315|ref|NP_126790.1| - 0.021 14.5 0.0 0.059 13.1 0.0 1.7 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_23 PF13476.6 gi|14521315|ref|NP_126790.1| - 0.026 15.0 0.6 0.93 10.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|14521315|ref|NP_126790.1| - 0.027 14.8 0.7 0.052 13.9 0.1 2.0 2 1 0 2 2 1 0 AAA domain DnaB_C PF03796.15 gi|14521315|ref|NP_126790.1| - 0.029 13.7 0.0 0.47 9.7 0.0 2.4 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain MeaB PF03308.16 gi|14521315|ref|NP_126790.1| - 0.032 13.2 0.0 0.068 12.1 0.0 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|14521315|ref|NP_126790.1| - 0.034 13.7 0.0 0.078 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|14521315|ref|NP_126790.1| - 0.035 14.4 0.1 0.15 12.3 0.0 2.1 2 0 0 2 2 1 0 AAA domain SRP54 PF00448.22 gi|14521315|ref|NP_126790.1| - 0.044 13.4 0.1 0.12 12.0 0.1 1.7 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 gi|14521315|ref|NP_126790.1| - 0.046 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 gi|14521315|ref|NP_126790.1| - 0.053 12.8 0.4 0.14 11.5 0.1 1.8 2 0 0 2 2 2 0 Zeta toxin NACHT PF05729.12 gi|14521315|ref|NP_126790.1| - 0.061 13.2 0.1 0.13 12.1 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA_17 PF13207.6 gi|14521315|ref|NP_126790.1| - 0.073 13.5 0.2 0.65 10.4 0.0 2.8 3 0 0 3 3 2 0 AAA domain MMR_HSR1 PF01926.23 gi|14521315|ref|NP_126790.1| - 0.11 12.6 0.0 0.28 11.3 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 gi|14521315|ref|NP_126790.1| - 0.11 11.8 0.0 0.24 10.7 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_24 PF13479.6 gi|14521315|ref|NP_126790.1| - 0.16 11.7 0.2 0.35 10.6 0.1 1.6 2 0 0 2 2 1 0 AAA domain Viral_helicase1 PF01443.18 gi|14521315|ref|NP_126790.1| - 0.17 11.6 0.0 0.45 10.2 0.0 1.7 2 0 0 2 2 1 0 Viral (Superfamily 1) RNA helicase Rubrerythrin PF02915.17 gi|14521316|ref|NP_126791.1| - 0.00017 22.0 14.0 0.022 15.2 2.3 2.2 2 0 0 2 2 2 2 Rubrerythrin L27_1 PF09058.10 gi|14521316|ref|NP_126791.1| - 0.013 15.4 1.4 0.036 14.0 0.3 2.2 2 0 0 2 2 2 0 L27_1 DUF4132 PF13569.6 gi|14521316|ref|NP_126791.1| - 0.03 14.1 1.4 0.28 11.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4132) Rad33 PF08730.10 gi|14521316|ref|NP_126791.1| - 0.031 14.3 0.2 0.062 13.3 0.2 1.5 1 0 0 1 1 1 0 Rad33 NBD94 PF16830.5 gi|14521316|ref|NP_126791.1| - 0.04 14.3 8.5 1 9.8 0.7 2.5 2 1 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH APG6_N PF17675.1 gi|14521316|ref|NP_126791.1| - 0.13 12.8 9.5 1.6 9.2 0.7 2.2 2 0 0 2 2 2 0 Apg6 coiled-coil region MCM_N PF14551.6 gi|14521316|ref|NP_126791.1| - 0.16 12.6 2.5 0.2 12.3 1.5 1.8 1 1 0 1 1 1 0 MCM N-terminal domain PEP-utilisers_N PF05524.13 gi|14521316|ref|NP_126791.1| - 0.31 11.2 5.4 0.59 10.3 0.9 2.1 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal Vir_act_alpha_C PF10400.9 gi|14521316|ref|NP_126791.1| - 0.52 11.0 6.0 1.6 9.5 0.6 2.7 2 0 0 2 2 2 0 Virulence activator alpha C-term Histidinol_dh PF00815.20 gi|14521316|ref|NP_126791.1| - 0.55 9.2 2.6 0.83 8.6 0.2 1.9 2 0 0 2 2 2 0 Histidinol dehydrogenase Prefoldin_2 PF01920.20 gi|14521316|ref|NP_126791.1| - 0.77 9.7 10.6 0.74 9.8 1.7 2.3 2 0 0 2 2 2 0 Prefoldin subunit FCD PF07729.12 gi|14521316|ref|NP_126791.1| - 0.89 10.0 6.6 1.3 9.4 1.9 2.8 2 2 0 2 2 2 0 FCD domain DUF2383 PF09537.10 gi|14521316|ref|NP_126791.1| - 1.4 9.3 8.4 1.9 8.9 0.4 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF2383) Thy1 PF02511.15 gi|14521316|ref|NP_126791.1| - 1.8 8.3 5.4 47 3.7 5.4 2.6 1 1 0 1 1 1 0 Thymidylate synthase complementing protein ATPase PF06745.13 gi|14521317|ref|NP_126792.1| - 3.5e-14 52.7 0.1 6.9e-14 51.7 0.0 1.5 2 0 0 2 2 2 1 KaiC V4R PF02830.18 gi|14521317|ref|NP_126792.1| - 2.2e-10 40.4 0.0 3.3e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 V4R domain Phyto_Pns9_10 PF05878.11 gi|14521317|ref|NP_126792.1| - 0.065 12.4 0.0 0.13 11.4 0.1 1.4 2 0 0 2 2 2 0 Phytoreovirus nonstructural protein Pns9/Pns10 SAS-6_N PF16531.5 gi|14521317|ref|NP_126792.1| - 0.073 13.7 0.1 0.38 11.4 0.1 2.1 2 0 0 2 2 2 0 Centriolar protein SAS N-terminal MEDS PF14417.6 gi|14521317|ref|NP_126792.1| - 0.084 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DHquinase_II PF01220.19 gi|14521318|ref|NP_126793.1| - 0.013 15.2 1.7 3.3 7.4 0.1 2.7 1 1 2 3 3 3 0 Dehydroquinase class II DUF4352 PF11611.8 gi|14521318|ref|NP_126793.1| - 0.018 15.3 1.3 0.036 14.3 1.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4352) DUF2258 PF10015.9 gi|14521319|ref|NP_126794.1| - 3.7e-23 81.4 0.4 3.7e-23 81.4 0.4 2.0 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2258) Uds1 PF15456.6 gi|14521319|ref|NP_126794.1| - 0.0092 16.1 2.4 0.0099 16.0 1.9 1.5 1 1 0 1 1 1 1 Up-regulated During Septation AAA_23 PF13476.6 gi|14521319|ref|NP_126794.1| - 0.0092 16.5 1.6 0.01 16.3 1.6 1.1 1 0 0 1 1 1 1 AAA domain DUF677 PF05055.12 gi|14521319|ref|NP_126794.1| - 0.012 14.5 6.6 0.015 14.2 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Med8 PF10232.9 gi|14521319|ref|NP_126794.1| - 0.014 15.0 0.8 0.027 14.1 0.8 1.5 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 DUF2203 PF09969.9 gi|14521319|ref|NP_126794.1| - 0.015 16.1 5.0 0.4 11.4 0.5 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF4895 PF16236.5 gi|14521319|ref|NP_126794.1| - 0.021 14.6 2.3 0.024 14.4 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4895) DUF244 PF03112.14 gi|14521319|ref|NP_126794.1| - 0.047 13.5 5.2 0.073 12.9 5.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF DUF4268 PF14088.6 gi|14521319|ref|NP_126794.1| - 0.088 12.7 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) FemAB PF02388.16 gi|14521319|ref|NP_126794.1| - 0.094 11.6 1.0 0.25 10.2 0.7 1.6 2 0 0 2 2 2 0 FemAB family Laminin_II PF06009.12 gi|14521319|ref|NP_126794.1| - 0.65 10.0 6.2 1.6 8.8 6.0 1.7 1 1 1 2 2 2 0 Laminin Domain II XisI PF08869.11 gi|14521319|ref|NP_126794.1| - 0.81 10.1 5.4 1.8 9.0 1.0 2.8 2 1 0 2 2 2 0 XisI protein DUF2205 PF10224.9 gi|14521319|ref|NP_126794.1| - 3 7.9 9.3 0.17 11.9 3.1 2.1 2 1 1 3 3 3 0 Short coiled-coil protein ADK PF00406.22 gi|14521320|ref|NP_126795.1| - 1e-40 139.3 0.0 1.3e-40 138.9 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase ADK_lid PF05191.14 gi|14521320|ref|NP_126795.1| - 8.2e-21 73.7 1.7 1.4e-20 72.9 1.7 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_17 PF13207.6 gi|14521320|ref|NP_126795.1| - 3.1e-19 69.8 0.0 5.4e-19 69.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|14521320|ref|NP_126795.1| - 5.7e-05 23.3 0.0 8.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|14521320|ref|NP_126795.1| - 6e-05 23.6 0.1 0.00018 22.1 0.0 1.9 2 1 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 gi|14521320|ref|NP_126795.1| - 0.00019 21.3 0.0 0.0003 20.6 0.0 1.3 1 0 0 1 1 1 1 Cytidylate kinase AAA_22 PF13401.6 gi|14521320|ref|NP_126795.1| - 0.00086 19.6 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|14521320|ref|NP_126795.1| - 0.0039 16.5 0.0 0.036 13.3 0.0 2.0 1 1 0 1 1 1 1 Zeta toxin CobU PF02283.16 gi|14521320|ref|NP_126795.1| - 0.0072 15.9 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_24 PF13479.6 gi|14521320|ref|NP_126795.1| - 0.0097 15.6 0.0 0.018 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14521320|ref|NP_126795.1| - 0.014 15.8 0.0 0.023 15.1 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|14521320|ref|NP_126795.1| - 0.018 15.3 0.0 0.033 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|14521320|ref|NP_126795.1| - 0.022 14.1 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|14521320|ref|NP_126795.1| - 0.022 14.7 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|14521320|ref|NP_126795.1| - 0.052 13.9 0.0 0.073 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|14521320|ref|NP_126795.1| - 0.084 13.4 0.0 0.1 13.1 0.0 1.3 1 0 0 1 1 1 0 ABC transporter Thymidylate_kin PF02223.17 gi|14521320|ref|NP_126795.1| - 0.1 12.2 0.0 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase RNA_helicase PF00910.22 gi|14521320|ref|NP_126795.1| - 0.12 12.7 0.1 0.39 11.1 0.0 1.9 2 0 0 2 2 2 0 RNA helicase KTI12 PF08433.10 gi|14521320|ref|NP_126795.1| - 0.17 11.3 0.1 0.53 9.7 0.0 1.8 1 1 1 2 2 2 0 Chromatin associated protein KTI12 AAA_29 PF13555.6 gi|14521320|ref|NP_126795.1| - 0.18 11.6 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Prok-RING_1 PF14446.6 gi|14521320|ref|NP_126795.1| - 0.33 10.9 2.3 3.2 7.7 0.3 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-RRN7 PF11781.8 gi|14521320|ref|NP_126795.1| - 0.33 10.7 1.7 1.2 8.9 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TGT PF01702.18 gi|14521321|ref|NP_126796.1| - 6e-79 265.7 0.0 8.4e-79 265.2 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C1 PF14809.6 gi|14521321|ref|NP_126796.1| - 2.9e-35 120.4 0.5 8.5e-35 118.9 0.5 1.9 1 0 0 1 1 1 1 C1 domain of tRNA-guanine transglycosylase dimerisation TGT_C2 PF14810.6 gi|14521321|ref|NP_126796.1| - 9.2e-23 80.2 0.0 5.7e-22 77.6 0.0 2.4 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|14521321|ref|NP_126796.1| - 8.6e-16 57.7 0.1 6.1e-15 55.0 0.1 2.4 2 0 0 2 2 2 1 PUA domain PUA_3 PF17785.1 gi|14521321|ref|NP_126796.1| - 3.5e-05 23.5 0.2 0.0032 17.2 0.1 3.2 3 0 0 3 3 3 1 PUA-like domain UPF0113 PF03657.13 gi|14521321|ref|NP_126796.1| - 0.0019 18.4 0.0 0.017 15.4 0.0 2.5 3 0 0 3 3 3 1 UPF0113 PUA domain ThiS-like PF14453.6 gi|14521321|ref|NP_126796.1| - 0.021 14.9 0.2 0.13 12.4 0.1 2.4 2 1 0 2 2 2 0 ThiS-like ubiquitin T3SchapCesA PF11439.8 gi|14521321|ref|NP_126796.1| - 0.072 13.2 0.1 3.5 7.8 0.0 2.5 2 0 0 2 2 2 0 Type III secretion system filament chaperone CesA DUF4083 PF13314.6 gi|14521322|ref|NP_126797.1| - 0.11 12.5 1.4 0.17 11.8 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) FUN14 PF04930.15 gi|14521323|ref|NP_126798.1| - 1e-13 51.5 5.6 1.4e-13 51.0 5.6 1.2 1 0 0 1 1 1 1 FUN14 family SPC12 PF06645.13 gi|14521323|ref|NP_126798.1| - 0.013 15.5 2.9 0.013 15.5 2.9 1.9 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) MNHE PF01899.16 gi|14521323|ref|NP_126798.1| - 0.11 12.3 1.4 0.14 11.9 1.4 1.3 1 1 0 1 1 1 0 Na+/H+ ion antiporter subunit Gly-zipper_Omp PF13488.6 gi|14521323|ref|NP_126798.1| - 0.23 11.5 5.1 0.99 9.5 5.1 2.0 1 1 0 1 1 1 0 Glycine zipper FeoB_C PF07664.12 gi|14521323|ref|NP_126798.1| - 0.7 9.6 4.2 2 8.2 0.9 2.4 1 1 1 2 2 2 0 Ferrous iron transport protein B C terminus ApoO PF09769.9 gi|14521323|ref|NP_126798.1| - 1.7 8.6 3.5 29 4.6 2.1 2.0 1 1 1 2 2 2 0 Apolipoprotein O Phosphodiest PF01663.22 gi|14521324|ref|NP_126799.1| - 1.8e-52 179.1 0.0 2.1e-52 178.9 0.0 1.0 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 gi|14521324|ref|NP_126799.1| - 2.5e-08 33.6 0.0 2.7e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 Metalloenzyme superfamily Sulfatase PF00884.23 gi|14521324|ref|NP_126799.1| - 9.3e-07 28.5 0.0 0.00023 20.7 0.0 2.3 1 1 0 1 1 1 1 Sulfatase THUMP PF02926.17 gi|14521324|ref|NP_126799.1| - 0.16 12.1 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 THUMP domain Radical_SAM PF04055.21 gi|14521325|ref|NP_126800.1| - 2.8e-17 63.6 0.1 6.1e-17 62.5 0.1 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|14521325|ref|NP_126800.1| - 8.3e-10 39.1 0.0 1.6e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14521325|ref|NP_126800.1| - 1.3e-07 31.7 0.0 4.6e-07 30.0 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain DUF192 PF02643.15 gi|14521326|ref|NP_126801.1| - 3e-16 59.4 0.0 3.4e-16 59.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DEAD_assoc PF08494.11 gi|14521327|ref|NP_126802.1| - 2.8e-57 193.6 0.1 5.4e-57 192.7 0.1 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|14521327|ref|NP_126802.1| - 2.5e-29 102.3 0.1 2.3e-28 99.1 0.0 2.5 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|14521327|ref|NP_126802.1| - 4.6e-19 68.8 0.2 1.9e-18 66.8 0.1 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|14521327|ref|NP_126802.1| - 7e-10 39.2 0.0 2.2e-09 37.5 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|14521327|ref|NP_126802.1| - 0.0045 17.3 0.0 0.033 14.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain SNF2_N PF00176.23 gi|14521327|ref|NP_126802.1| - 0.0088 14.8 0.0 0.021 13.5 0.0 1.7 2 0 0 2 2 2 1 SNF2 family N-terminal domain ADH_zinc_N_2 PF13602.6 gi|14521327|ref|NP_126802.1| - 0.027 15.5 0.2 9.5 7.3 0.1 3.3 2 1 0 2 2 2 0 Zinc-binding dehydrogenase T2SSE PF00437.20 gi|14521327|ref|NP_126802.1| - 0.055 12.5 0.1 0.28 10.2 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF4130 PF13566.6 gi|14521327|ref|NP_126802.1| - 0.11 12.5 0.0 0.31 11.1 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 Phage_int_SAM_6 PF18644.1 gi|14521327|ref|NP_126802.1| - 0.22 11.6 1.0 35 4.4 0.0 3.3 3 1 0 3 3 3 0 Phage integrase SAM-like domain CoA_binding_2 PF13380.6 gi|14521329|ref|NP_126804.1| - 1.1e-40 138.7 0.0 1.3e-40 138.5 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|14521329|ref|NP_126804.1| - 5.3e-09 36.6 0.0 1e-08 35.7 0.0 1.4 1 0 0 1 1 1 1 CoA binding domain DUF4191 PF13829.6 gi|14521330|ref|NP_126805.1| - 0.2 11.0 2.4 0.27 10.6 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Glyco_hydro_130 PF04041.13 gi|14521331|ref|NP_126806.1| - 2.7e-74 250.0 0.0 3.3e-74 249.7 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase Glyco_hydro_43 PF04616.14 gi|14521331|ref|NP_126806.1| - 0.011 15.0 0.0 0.04 13.2 0.0 1.9 3 0 0 3 3 3 0 Glycosyl hydrolases family 43 Diphthamide_syn PF01866.17 gi|14521333|ref|NP_126809.1| - 1.4e-75 254.5 0.0 1.7e-75 254.3 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Fe-ADH PF00465.19 gi|14521333|ref|NP_126809.1| - 0.037 12.8 0.1 6.4 5.5 0.0 2.4 3 0 0 3 3 3 0 Iron-containing alcohol dehydrogenase Hydrolase_6 PF13344.6 gi|14521333|ref|NP_126809.1| - 0.038 14.1 0.0 4.7 7.4 0.0 3.0 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase STAS PF01740.21 gi|14521333|ref|NP_126809.1| - 0.08 12.6 0.1 0.2 11.3 0.1 1.6 1 0 0 1 1 1 0 STAS domain AAA_33 PF13671.6 gi|14521333|ref|NP_126809.1| - 0.092 12.9 0.1 7.1 6.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF1847 PF08901.11 gi|14521333|ref|NP_126809.1| - 0.12 12.0 0.0 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1847) DUF234 PF03008.14 gi|14521335|ref|NP_126811.1| - 1.1e-33 115.6 1.8 1.6e-33 115.1 0.7 1.7 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function DUF4143 PF13635.6 gi|14521335|ref|NP_126811.1| - 0.00035 20.7 0.1 0.00059 20.0 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) UPF0102 PF02021.17 gi|14521335|ref|NP_126811.1| - 0.00059 20.0 0.4 0.0029 17.8 0.1 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0102 HTH_5 PF01022.20 gi|14521335|ref|NP_126811.1| - 0.0052 16.6 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family ATPase_2 PF01637.18 gi|14521336|ref|NP_126812.1| - 4.6e-11 43.1 0.4 1.1e-05 25.5 0.1 2.1 1 1 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521336|ref|NP_126812.1| - 1.2e-06 28.5 0.3 3.8e-06 27.0 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521336|ref|NP_126812.1| - 0.00082 19.8 0.1 0.0013 19.2 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|14521336|ref|NP_126812.1| - 0.11 12.2 0.0 0.49 10.1 0.0 1.8 1 1 1 2 2 2 0 AAA domain Frtz PF11768.8 gi|14521336|ref|NP_126812.1| - 0.18 10.1 0.1 0.22 9.8 0.1 1.1 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz Ribosomal_S8e PF01201.22 gi|14521337|ref|NP_126813.1| - 8.9e-35 119.8 4.2 1e-34 119.7 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Sigma70_r3 PF04539.16 gi|14521337|ref|NP_126813.1| - 0.061 13.4 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Sigma-70 region 3 Asn_synthase PF00733.21 gi|14521338|ref|NP_126814.1| - 9.7e-59 199.8 0.2 5.3e-38 131.6 0.0 2.1 1 1 1 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|14521338|ref|NP_126814.1| - 5.3e-25 87.7 0.0 9.8e-25 86.8 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|14521338|ref|NP_126814.1| - 2.9e-20 72.8 0.0 8.2e-20 71.4 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.17 gi|14521338|ref|NP_126814.1| - 0.00012 21.2 0.0 0.00025 20.2 0.0 1.5 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|14521338|ref|NP_126814.1| - 0.015 14.1 0.1 0.03 13.1 0.1 1.5 1 1 0 1 1 1 0 tRNA methyl transferase QueC PF06508.13 gi|14521338|ref|NP_126814.1| - 0.02 14.4 0.0 0.037 13.5 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC LPD22 PF18834.1 gi|14521338|ref|NP_126814.1| - 0.15 12.3 0.1 0.47 10.7 0.0 1.8 2 0 0 2 2 2 0 Large polyvalent protein associated domain 22 ATPase_2 PF01637.18 gi|14521339|ref|NP_126815.1| - 6.9e-12 45.8 0.1 1.1e-11 45.1 0.1 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521339|ref|NP_126815.1| - 7.1e-12 45.5 0.1 1.8e-09 37.7 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521339|ref|NP_126815.1| - 2.9e-07 31.0 0.1 9.9e-07 29.3 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|14521339|ref|NP_126815.1| - 0.00042 20.7 0.0 0.0023 18.4 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|14521339|ref|NP_126815.1| - 0.009 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|14521339|ref|NP_126815.1| - 0.0096 16.2 0.1 0.037 14.3 0.1 1.9 1 1 0 1 1 1 1 AAA domain CobA_CobO_BtuR PF02572.15 gi|14521339|ref|NP_126815.1| - 0.022 15.0 0.0 0.038 14.3 0.0 1.3 1 0 0 1 1 1 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Clathrin_H_link PF13838.6 gi|14521339|ref|NP_126815.1| - 0.051 13.5 0.0 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 Clathrin-H-link Cdc6_C PF09079.11 gi|14521339|ref|NP_126815.1| - 0.059 13.3 0.0 0.54 10.3 0.0 2.2 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain PadR PF03551.14 gi|14521339|ref|NP_126815.1| - 0.072 13.1 0.1 0.41 10.6 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_5 PF01022.20 gi|14521340|ref|NP_126816.1| - 9.6e-15 54.2 1.6 2.5e-12 46.5 0.1 3.2 2 1 1 3 3 3 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14521340|ref|NP_126816.1| - 1.2e-12 47.7 0.8 1.4e-11 44.2 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|14521340|ref|NP_126816.1| - 0.00018 21.2 0.4 0.0033 17.2 0.1 2.7 2 1 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|14521340|ref|NP_126816.1| - 0.0025 17.7 0.0 0.0044 16.9 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|14521340|ref|NP_126816.1| - 0.0088 15.9 0.0 0.039 13.8 0.0 2.0 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|14521340|ref|NP_126816.1| - 0.011 15.6 0.1 0.027 14.4 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_34 PF13601.6 gi|14521340|ref|NP_126816.1| - 0.026 14.7 0.0 0.12 12.6 0.0 2.2 1 1 0 1 1 1 0 Winged helix DNA-binding domain FlaC_arch PF05377.11 gi|14521340|ref|NP_126816.1| - 0.034 14.5 0.4 0.088 13.2 0.4 1.7 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) COG2 PF06148.11 gi|14521340|ref|NP_126816.1| - 0.047 13.8 1.7 0.085 12.9 1.7 1.4 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4988 PF16378.5 gi|14521340|ref|NP_126816.1| - 0.065 12.9 0.1 0.09 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function Fib_alpha PF08702.10 gi|14521340|ref|NP_126816.1| - 0.066 13.4 0.3 0.1 12.8 0.3 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family HTH_11 PF08279.12 gi|14521340|ref|NP_126816.1| - 0.067 13.1 0.7 0.39 10.7 0.1 2.4 2 0 0 2 2 2 0 HTH domain TFIIE_beta PF02186.15 gi|14521340|ref|NP_126816.1| - 0.15 12.3 1.6 2 8.8 0.1 2.8 1 1 1 2 2 2 0 TFIIE beta subunit core domain HK97-gp10_like PF04883.12 gi|14521340|ref|NP_126816.1| - 0.22 12.5 1.8 0.78 10.8 0.2 2.2 2 0 0 2 2 2 0 Bacteriophage HK97-gp10, putative tail-component FapA PF03961.13 gi|14521340|ref|NP_126816.1| - 0.3 9.7 2.5 0.35 9.4 2.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2089 PF09862.9 gi|14521340|ref|NP_126816.1| - 0.59 10.2 6.3 0.51 10.4 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) Myc-LZ PF02344.15 gi|14521340|ref|NP_126816.1| - 0.77 9.9 11.4 9.8 6.4 6.6 2.8 2 0 0 2 2 2 0 Myc leucine zipper domain Matrilin_ccoil PF10393.9 gi|14521340|ref|NP_126816.1| - 1 9.3 5.7 0.3 11.0 2.6 1.7 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin ZapA PF05164.13 gi|14521341|ref|NP_126817.1| - 0.018 15.5 0.8 0.069 13.6 0.2 2.2 2 0 0 2 2 2 0 Cell division protein ZapA DUF4097 PF13349.6 gi|14521342|ref|NP_126818.1| - 3.1e-14 53.0 3.9 2.8e-12 46.5 3.9 2.2 1 1 0 1 1 1 1 Putative adhesin DUF5611 PF18446.1 gi|14521342|ref|NP_126818.1| - 0.1 13.5 0.1 0.23 12.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5611) BiPBP_C PF06832.12 gi|14521342|ref|NP_126818.1| - 0.1 12.7 0.0 18 5.4 0.0 2.4 1 1 1 2 2 2 0 Penicillin-Binding Protein C-terminus Family MFS_1 PF07690.16 gi|14521343|ref|NP_126819.1| - 9.7e-28 97.1 34.3 1.9e-21 76.4 17.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|14521343|ref|NP_126819.1| - 4.6e-20 71.5 14.0 6.2e-20 71.1 14.0 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.6 gi|14521343|ref|NP_126819.1| - 5.5e-07 28.5 26.6 0.00011 20.9 7.3 2.6 1 1 0 2 2 2 2 MFS/sugar transport protein ATG22 PF11700.8 gi|14521343|ref|NP_126819.1| - 0.0003 19.5 8.3 0.058 12.0 2.3 2.6 1 1 1 2 2 2 2 Vacuole effluxer Atg22 like GTP_EFTU_D4 PF14578.6 gi|14521344|ref|NP_126820.1| - 2.1e-30 104.5 1.9 1.1e-29 102.2 1.1 2.6 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 gi|14521344|ref|NP_126820.1| - 1.4e-29 103.0 0.5 3.9e-26 91.8 0.0 3.0 3 0 0 3 3 3 2 Elongation factor Tu GTP binding domain Intein_splicing PF14890.6 gi|14521344|ref|NP_126820.1| - 5e-25 88.0 0.2 1.9e-24 86.1 0.2 2.0 1 0 0 1 1 1 1 Intein splicing domain IF-2 PF11987.8 gi|14521344|ref|NP_126820.1| - 2.5e-24 85.4 4.3 6.5e-24 84.1 4.3 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|14521344|ref|NP_126820.1| - 7.6e-17 61.5 8.1 8.1e-13 48.6 0.1 3.9 3 0 0 3 3 3 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|14521344|ref|NP_126820.1| - 0.00019 21.5 0.2 0.0014 18.7 0.0 2.6 3 0 0 3 3 3 1 50S ribosome-binding GTPase LAGLIDADG_3 PF14528.6 gi|14521344|ref|NP_126820.1| - 0.0015 18.8 0.6 0.015 15.6 0.6 2.7 1 1 0 1 1 1 1 LAGLIDADG-like domain ATP_bind_1 PF03029.17 gi|14521344|ref|NP_126820.1| - 0.029 14.2 0.0 0.1 12.3 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein IL13 PF03487.13 gi|14521344|ref|NP_126820.1| - 0.045 13.5 0.0 0.15 11.9 0.0 1.9 1 0 0 1 1 1 0 Interleukin-13 Cas_Cas6 PF01881.16 gi|14521345|ref|NP_126821.1| - 8e-31 107.6 0.4 1.3e-30 106.9 0.4 1.3 1 0 0 1 1 1 1 CRISPR associated protein Cas6 Carbam_trans_C PF16861.5 gi|14521346|ref|NP_126822.1| - 7.4e-57 191.6 0.0 1.1e-56 191.0 0.0 1.2 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Carbam_trans_N PF02543.15 gi|14521346|ref|NP_126822.1| - 2.4e-51 175.4 0.8 2.5e-41 142.4 0.3 2.1 1 1 1 2 2 2 2 Carbamoyltransferase N-terminus Peptidase_M22 PF00814.25 gi|14521346|ref|NP_126822.1| - 4.3e-06 26.6 0.1 3.1e-05 23.8 0.0 2.1 2 0 0 2 2 2 1 Glycoprotease family AAA_18 PF13238.6 gi|14521347|ref|NP_126823.1| - 3.9e-24 85.7 0.2 6.8e-24 84.9 0.2 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|14521347|ref|NP_126823.1| - 4e-08 33.8 1.4 3.6e-07 30.7 0.2 2.6 1 1 1 2 2 2 1 AAA domain SKI PF01202.22 gi|14521347|ref|NP_126823.1| - 6e-08 33.0 0.3 1.2e-05 25.5 0.3 2.1 1 1 0 1 1 1 1 Shikimate kinase Cytidylate_kin PF02224.18 gi|14521347|ref|NP_126823.1| - 1.5e-07 31.4 0.0 0.00089 19.0 0.0 2.2 2 0 0 2 2 2 2 Cytidylate kinase AAA_28 PF13521.6 gi|14521347|ref|NP_126823.1| - 2.7e-07 31.0 0.4 2.8e-05 24.4 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|14521347|ref|NP_126823.1| - 2.8e-07 31.0 0.4 2e-06 28.2 0.4 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) dNK PF01712.19 gi|14521347|ref|NP_126823.1| - 1.5e-06 28.2 0.4 0.015 15.2 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase Cytidylate_kin2 PF13189.6 gi|14521347|ref|NP_126823.1| - 2.7e-06 27.6 0.1 3.2e-05 24.2 0.0 2.1 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_33 PF13671.6 gi|14521347|ref|NP_126823.1| - 6.6e-06 26.3 0.1 0.00011 22.4 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14521347|ref|NP_126823.1| - 2.9e-05 24.4 0.3 0.00039 20.7 0.4 2.2 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|14521347|ref|NP_126823.1| - 0.00015 21.7 1.6 0.00034 20.6 0.1 2.2 1 1 0 1 1 1 1 NTPase Thymidylate_kin PF02223.17 gi|14521347|ref|NP_126823.1| - 0.00015 21.5 0.4 0.33 10.6 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_5 PF07728.14 gi|14521347|ref|NP_126823.1| - 0.00054 20.0 0.1 0.011 15.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) UPF0180 PF03698.13 gi|14521347|ref|NP_126823.1| - 0.0012 19.0 2.6 0.015 15.5 1.1 2.8 2 1 0 2 2 2 1 Uncharacterised protein family (UPF0180) RuvB_N PF05496.12 gi|14521347|ref|NP_126823.1| - 0.0032 17.2 0.0 0.0074 16.0 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain KTI12 PF08433.10 gi|14521347|ref|NP_126823.1| - 0.0032 17.0 0.0 0.0053 16.2 0.0 1.5 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|14521347|ref|NP_126823.1| - 0.0033 17.8 0.0 0.0045 17.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|14521347|ref|NP_126823.1| - 0.0034 16.7 0.1 0.12 11.6 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin AAA_14 PF13173.6 gi|14521347|ref|NP_126823.1| - 0.005 16.9 0.1 0.012 15.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|14521347|ref|NP_126823.1| - 0.01 15.8 0.0 0.01 15.8 0.0 1.4 1 1 0 1 1 1 0 NACHT domain Rad17 PF03215.15 gi|14521347|ref|NP_126823.1| - 0.011 15.7 0.0 0.02 14.8 0.0 1.5 2 0 0 2 2 1 0 Rad17 P-loop domain RNA_helicase PF00910.22 gi|14521347|ref|NP_126823.1| - 0.015 15.6 0.1 0.053 13.9 0.0 1.8 2 0 0 2 2 2 0 RNA helicase AAA_3 PF07726.11 gi|14521347|ref|NP_126823.1| - 0.017 15.0 0.1 0.086 12.7 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 gi|14521347|ref|NP_126823.1| - 0.018 14.8 0.1 0.18 11.5 0.0 2.0 1 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 gi|14521347|ref|NP_126823.1| - 0.018 14.7 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|14521347|ref|NP_126823.1| - 0.021 14.8 0.8 0.067 13.2 0.1 2.2 3 1 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|14521347|ref|NP_126823.1| - 0.021 15.3 0.2 0.025 15.1 0.2 1.6 1 1 0 1 1 1 0 ABC transporter CPT PF07931.12 gi|14521347|ref|NP_126823.1| - 0.029 14.2 0.2 7 6.5 0.0 2.2 1 1 1 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_24 PF13479.6 gi|14521347|ref|NP_126823.1| - 0.03 14.1 1.2 0.046 13.4 1.2 1.8 1 1 0 1 1 1 0 AAA domain SOR_SNZ PF01680.17 gi|14521347|ref|NP_126823.1| - 0.036 13.8 0.4 0.063 13.1 0.4 1.3 1 0 0 1 1 1 0 SOR/SNZ family APS_kinase PF01583.20 gi|14521347|ref|NP_126823.1| - 0.042 13.8 0.1 0.25 11.2 0.0 2.0 2 0 0 2 2 2 0 Adenylylsulphate kinase CoaE PF01121.20 gi|14521347|ref|NP_126823.1| - 0.047 13.4 0.0 0.091 12.4 0.0 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase NB-ARC PF00931.22 gi|14521347|ref|NP_126823.1| - 0.06 12.5 0.1 0.11 11.7 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain MeaB PF03308.16 gi|14521347|ref|NP_126823.1| - 0.067 12.2 0.4 0.16 10.9 0.1 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ADK PF00406.22 gi|14521347|ref|NP_126823.1| - 0.078 13.1 0.7 1.6 8.9 0.0 2.3 1 1 1 2 2 2 0 Adenylate kinase DUF3892 PF13031.6 gi|14521347|ref|NP_126823.1| - 0.097 13.3 0.3 0.19 12.4 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3892) DUF87 PF01935.17 gi|14521347|ref|NP_126823.1| - 0.13 12.4 0.8 1.6 8.7 0.4 2.1 1 1 0 2 2 2 0 Helicase HerA, central domain DUF4920 PF16267.5 gi|14521347|ref|NP_126823.1| - 0.15 12.1 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4920) MMR_HSR1 PF01926.23 gi|14521347|ref|NP_126823.1| - 0.19 11.8 0.4 0.32 11.1 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase Peptidase_M48 PF01435.18 gi|14521348|ref|NP_126824.1| - 7e-40 136.9 0.0 9.7e-40 136.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|14521348|ref|NP_126824.1| - 3.9e-05 23.0 0.1 6.7e-05 22.2 0.1 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 TMEM151 PF14857.6 gi|14521348|ref|NP_126824.1| - 0.075 11.9 0.1 0.1 11.5 0.1 1.1 1 0 0 1 1 1 0 TMEM151 family DUF4282 PF14110.6 gi|14521348|ref|NP_126824.1| - 9.6 7.0 9.0 0.5 11.1 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) Diphthami_syn_2 PF01902.17 gi|14521349|ref|NP_126825.1| - 3.9e-90 301.1 0.3 4.4e-90 301.0 0.3 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|14521349|ref|NP_126825.1| - 0.025 14.1 0.0 0.036 13.5 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC tRNA_U5-meth_tr PF05958.11 gi|14521350|ref|NP_126826.1| - 1.5e-19 70.2 0.0 1.5e-12 47.2 0.0 2.1 1 1 1 2 2 2 2 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 gi|14521350|ref|NP_126826.1| - 2.6e-10 40.9 0.0 1.6e-06 28.7 0.0 2.8 2 1 1 3 3 3 2 Methyltransferase domain MTS PF05175.14 gi|14521350|ref|NP_126826.1| - 4.9e-08 32.7 0.0 7.8e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|14521350|ref|NP_126826.1| - 7.2e-07 28.8 0.0 1.2e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_31 PF13847.6 gi|14521350|ref|NP_126826.1| - 2e-06 27.7 0.0 3.3e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521350|ref|NP_126826.1| - 2.2e-06 28.2 0.0 0.00029 21.4 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 gi|14521350|ref|NP_126826.1| - 3.3e-06 27.0 0.0 7.3e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|14521350|ref|NP_126826.1| - 9.9e-05 22.2 0.0 0.00022 21.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14521350|ref|NP_126826.1| - 0.011 16.4 0.0 0.13 13.0 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521350|ref|NP_126826.1| - 0.019 14.5 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.18 gi|14521350|ref|NP_126826.1| - 0.053 12.8 0.0 0.1 11.9 0.0 1.4 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family N6_N4_Mtase PF01555.18 gi|14521350|ref|NP_126826.1| - 0.071 12.8 0.0 0.18 11.5 0.0 1.6 2 0 0 2 2 2 0 DNA methylase PrmA PF06325.13 gi|14521350|ref|NP_126826.1| - 0.089 12.2 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 gi|14521350|ref|NP_126826.1| - 0.09 12.4 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW MFS_1 PF07690.16 gi|14521351|ref|NP_126827.1| - 1.9e-44 152.0 53.5 1.9e-41 142.2 41.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|14521351|ref|NP_126827.1| - 3.8e-13 49.1 29.9 8.3e-08 31.5 9.2 4.2 2 2 1 4 4 4 3 Sugar (and other) transporter MFS_1_like PF12832.7 gi|14521351|ref|NP_126827.1| - 8e-06 25.0 22.9 0.0033 16.4 1.4 3.5 2 2 2 4 4 4 3 MFS_1 like family E1-E2_ATPase PF00122.20 gi|14521351|ref|NP_126827.1| - 0.88 9.1 3.5 1.6 8.3 2.3 2.0 1 1 0 1 1 1 0 E1-E2 ATPase Peptidase_S9 PF00326.21 gi|14521352|ref|NP_126828.1| - 7.1e-57 192.3 0.0 1.1e-56 191.7 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 gi|14521352|ref|NP_126828.1| - 1.6e-23 83.2 0.0 5.3e-23 81.5 0.0 1.8 1 1 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S15 PF02129.18 gi|14521352|ref|NP_126828.1| - 0.0036 16.9 0.0 0.94 9.0 0.0 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|14521352|ref|NP_126828.1| - 0.0041 16.4 0.0 0.021 14.1 0.0 1.9 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|14521352|ref|NP_126828.1| - 0.21 11.2 0.0 2.9 7.5 0.0 2.0 1 1 0 2 2 2 0 alpha/beta hydrolase fold DUF4342 PF14242.6 gi|14521353|ref|NP_126829.1| - 0.09 12.8 0.3 0.14 12.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) Ribosomal_L34e PF01199.18 gi|33356749|ref|NP_126830.2| - 3.4e-24 85.0 4.4 3.9e-24 84.8 4.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e DZR PF12773.7 gi|33356749|ref|NP_126830.2| - 0.0035 17.3 0.3 0.0049 16.9 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon Sgf11 PF08209.11 gi|33356749|ref|NP_126830.2| - 0.072 12.7 2.3 4.3 7.0 0.1 2.6 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) Zn_ribbon_recom PF13408.6 gi|33356749|ref|NP_126830.2| - 4.3 7.9 6.3 1.3 9.6 1.6 2.3 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain Cytidylate_kin2 PF13189.6 gi|14521355|ref|NP_126831.1| - 2.9e-28 99.2 0.9 2.3e-26 93.0 0.9 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family Cytidylate_kin PF02224.18 gi|14521355|ref|NP_126831.1| - 1.1e-16 61.3 1.6 2.4e-10 40.5 0.3 2.1 1 1 1 2 2 2 2 Cytidylate kinase AAA_18 PF13238.6 gi|14521355|ref|NP_126831.1| - 1.5e-16 61.1 0.1 2e-16 60.7 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|14521355|ref|NP_126831.1| - 1.8e-14 54.3 0.1 4.2e-14 53.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|14521355|ref|NP_126831.1| - 8e-06 26.1 0.6 0.00044 20.4 0.6 2.1 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|14521355|ref|NP_126831.1| - 4.2e-05 23.5 0.8 0.068 13.0 0.0 3.0 1 1 1 2 2 2 2 Deoxynucleoside kinase CoaE PF01121.20 gi|14521355|ref|NP_126831.1| - 0.00018 21.2 0.4 0.49 10.0 0.0 2.2 1 1 1 2 2 2 2 Dephospho-CoA kinase ADK PF00406.22 gi|14521355|ref|NP_126831.1| - 0.00028 21.0 0.0 0.0005 20.2 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase AAA_28 PF13521.6 gi|14521355|ref|NP_126831.1| - 0.0011 19.3 0.2 0.0027 18.0 0.0 1.6 2 0 0 2 2 2 1 AAA domain PRK PF00485.18 gi|14521355|ref|NP_126831.1| - 0.0093 15.7 0.2 0.2 11.4 0.0 2.3 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 gi|14521355|ref|NP_126831.1| - 0.019 14.1 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain SKI PF01202.22 gi|14521355|ref|NP_126831.1| - 0.023 14.8 0.4 0.15 12.2 0.4 2.0 1 1 0 1 1 1 0 Shikimate kinase AAA_22 PF13401.6 gi|14521355|ref|NP_126831.1| - 0.084 13.2 0.2 0.11 12.8 0.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|14521355|ref|NP_126831.1| - 0.13 12.6 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Ribosomal_L14e PF01929.17 gi|14521356|ref|NP_126832.1| - 1.7e-05 25.2 0.0 2.5e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 KOW PF00467.29 gi|14521356|ref|NP_126832.1| - 4.8e-05 23.2 1.4 7.5e-05 22.5 1.4 1.3 1 0 0 1 1 1 1 KOW motif XisI PF08869.11 gi|14521356|ref|NP_126832.1| - 0.081 13.3 0.0 0.089 13.2 0.0 1.0 1 0 0 1 1 1 0 XisI protein Hist_deacetyl PF00850.19 gi|14521357|ref|NP_126833.1| - 6.5e-65 219.6 0.0 1e-64 219.0 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain PBP PF01161.20 gi|14521358|ref|NP_126834.1| - 7e-35 120.2 0.0 8.6e-35 119.9 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Polysacc_synt PF01943.17 gi|14521359|ref|NP_126835.1| - 1.8e-26 93.2 18.3 1.8e-26 93.2 18.3 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|14521359|ref|NP_126835.1| - 3.6e-17 62.7 4.8 3.6e-17 62.7 4.8 4.6 3 1 2 5 5 5 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.6 gi|14521359|ref|NP_126835.1| - 1.4e-11 44.1 9.7 1.4e-11 44.1 9.7 2.0 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein MurJ PF03023.14 gi|14521359|ref|NP_126835.1| - 3.8e-08 32.4 11.1 3.8e-08 32.4 11.1 2.3 2 1 0 2 2 2 1 Lipid II flippase MurJ MatE PF01554.18 gi|14521359|ref|NP_126835.1| - 2.2e-06 27.5 9.8 2.2e-06 27.5 9.8 3.3 3 1 1 4 4 4 1 MatE Fig1 PF12351.8 gi|14521359|ref|NP_126835.1| - 5.6 6.8 9.3 0.086 12.8 0.7 2.1 2 0 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 Glyco_transf_4 PF13439.6 gi|14521360|ref|NP_126836.1| - 2.4e-15 56.9 0.3 8.7e-15 55.1 0.5 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|14521360|ref|NP_126836.1| - 9.5e-12 45.6 0.0 1.5e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|14521360|ref|NP_126836.1| - 9.9e-08 31.7 0.1 1.6e-07 31.0 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14521360|ref|NP_126836.1| - 0.00017 22.0 0.0 0.00026 21.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|14521360|ref|NP_126836.1| - 0.00018 21.3 0.1 0.0005 19.8 0.1 1.7 1 0 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.6 gi|14521360|ref|NP_126836.1| - 0.0002 21.7 0.0 0.00032 21.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Asn_synthase PF00733.21 gi|14521361|ref|NP_126837.1| - 6.9e-83 279.2 0.0 9.3e-83 278.8 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|14521361|ref|NP_126837.1| - 7.4e-47 158.3 0.0 1.4e-46 157.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|14521361|ref|NP_126837.1| - 3.6e-44 150.2 0.0 5.5e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 gi|14521361|ref|NP_126837.1| - 0.00015 21.3 0.1 0.00039 20.0 0.1 1.6 1 1 0 1 1 1 1 Aluminium induced protein NAD_synthase PF02540.17 gi|14521361|ref|NP_126837.1| - 0.016 14.3 0.0 0.045 12.9 0.0 1.6 2 0 0 2 2 2 0 NAD synthase Glyco_transf_4 PF13439.6 gi|14521362|ref|NP_126838.1| - 5.8e-11 42.7 0.0 1.2e-10 41.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|14521362|ref|NP_126838.1| - 3e-09 36.6 0.0 5.3e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|14521362|ref|NP_126838.1| - 1.5e-08 35.2 0.0 2.7e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|14521362|ref|NP_126838.1| - 7.8e-08 32.8 0.0 1.3e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|14521362|ref|NP_126838.1| - 0.013 15.2 0.1 0.03 14.0 0.1 1.6 1 1 0 1 1 1 0 Starch synthase catalytic domain DUF1600 PF07667.11 gi|14521362|ref|NP_126838.1| - 0.7 10.1 5.8 0.88 9.8 3.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1600) UDPG_MGDP_dh_N PF03721.14 gi|14521363|ref|NP_126839.1| - 2.4e-62 209.9 0.1 3.8e-62 209.2 0.1 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|14521363|ref|NP_126839.1| - 1.6e-39 134.0 0.0 4.2e-39 132.7 0.0 1.7 2 0 0 2 2 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|14521363|ref|NP_126839.1| - 1.9e-27 95.7 0.0 1.3e-26 93.1 0.0 2.3 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|14521363|ref|NP_126839.1| - 5.7e-06 26.8 0.2 0.96 10.1 0.0 4.4 3 1 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|14521363|ref|NP_126839.1| - 0.02 14.3 0.1 1.9 7.8 0.0 2.6 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|14521363|ref|NP_126839.1| - 0.043 14.4 0.1 0.16 12.6 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DpaA_N PF16924.5 gi|14521363|ref|NP_126839.1| - 0.06 13.4 0.0 0.23 11.6 0.0 2.0 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Tex_N PF09371.10 gi|14521363|ref|NP_126839.1| - 0.063 13.0 0.1 1.2 8.7 0.0 2.3 2 0 0 2 2 2 0 Tex-like protein N-terminal domain NAD_binding_2 PF03446.15 gi|14521363|ref|NP_126839.1| - 0.065 13.4 0.0 3.5 7.8 0.0 2.8 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|14521363|ref|NP_126839.1| - 0.07 12.3 0.0 0.13 11.4 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase OTCace PF00185.24 gi|14521363|ref|NP_126839.1| - 0.15 12.1 0.1 3 7.9 0.0 2.5 3 0 0 3 3 3 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FAD_binding_3 PF01494.19 gi|14521363|ref|NP_126839.1| - 0.2 10.8 0.1 0.57 9.4 0.1 1.7 2 0 0 2 2 2 0 FAD binding domain NTP_transferase PF00483.23 gi|14521364|ref|NP_126840.1| - 1.4e-31 109.9 0.0 1.9e-31 109.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|14521364|ref|NP_126840.1| - 5.5e-10 39.8 0.0 8.2e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|14521364|ref|NP_126840.1| - 0.00019 21.3 0.0 0.00027 20.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 IspD PF01128.19 gi|14521364|ref|NP_126840.1| - 0.0021 17.8 0.0 0.0038 17.0 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Smr PF01713.21 gi|14521364|ref|NP_126840.1| - 0.0078 16.5 0.0 0.083 13.3 0.0 2.3 2 0 0 2 2 2 1 Smr domain Glycos_transf_2 PF00535.26 gi|14521365|ref|NP_126841.1| - 6.3e-41 140.0 0.0 1e-40 139.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521365|ref|NP_126841.1| - 1.4e-21 77.4 0.0 2.5e-21 76.6 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|14521365|ref|NP_126841.1| - 2.4e-16 60.1 0.0 3.8e-16 59.4 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|14521365|ref|NP_126841.1| - 0.0026 18.3 0.0 0.0053 17.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|14521365|ref|NP_126841.1| - 0.018 14.9 0.0 0.041 13.8 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase family group 2 GNT-I PF03071.15 gi|14521365|ref|NP_126841.1| - 0.19 10.5 0.9 0.23 10.2 0.0 1.6 2 0 0 2 2 2 0 GNT-I family Hexapep PF00132.24 gi|14521366|ref|NP_126842.1| - 3e-24 83.8 14.2 3.3e-08 32.9 0.8 3.9 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|14521366|ref|NP_126842.1| - 2.1e-18 65.8 18.1 1.1e-09 37.9 4.8 4.1 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Acetyltransf_11 PF13720.6 gi|14521366|ref|NP_126842.1| - 0.025 15.0 0.1 0.041 14.3 0.1 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Desulfoferrod_N PF06397.12 gi|14521366|ref|NP_126842.1| - 0.034 13.8 0.3 0.034 13.8 0.3 2.7 3 0 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain DUF2613 PF11021.8 gi|14521366|ref|NP_126842.1| - 0.12 12.5 1.0 0.2 11.8 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) zinc_ribbon_2 PF13240.6 gi|14521366|ref|NP_126842.1| - 0.12 12.1 3.5 0.81 9.5 0.8 3.1 3 0 0 3 3 3 0 zinc-ribbon domain DUF951 PF06107.11 gi|14521366|ref|NP_126842.1| - 0.13 12.2 2.6 0.16 11.9 0.8 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) DUF1922 PF09082.10 gi|14521366|ref|NP_126842.1| - 5.7 7.3 6.4 8.9 6.7 3.6 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1922) DegT_DnrJ_EryC1 PF01041.17 gi|14521367|ref|NP_126843.1| - 5.3e-143 476.7 0.0 5.9e-143 476.5 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|14521367|ref|NP_126843.1| - 2.4e-07 30.3 0.1 4.5e-07 29.4 0.1 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|14521367|ref|NP_126843.1| - 9.6e-07 28.4 0.0 1.3e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|14521367|ref|NP_126843.1| - 0.00014 21.0 0.1 0.0002 20.4 0.1 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|14521367|ref|NP_126843.1| - 0.0022 16.6 0.0 0.0031 16.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Thump_like PF18096.1 gi|14521367|ref|NP_126843.1| - 0.047 13.6 0.1 50 3.9 0.1 3.4 3 0 0 3 3 3 0 THUMP domain-like SHMT PF00464.19 gi|14521367|ref|NP_126843.1| - 0.076 11.6 0.0 0.1 11.2 0.0 1.2 1 0 0 1 1 1 0 Serine hydroxymethyltransferase S_100 PF01023.19 gi|14521367|ref|NP_126843.1| - 0.17 11.6 0.0 0.42 10.3 0.0 1.6 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain GFO_IDH_MocA PF01408.22 gi|14521368|ref|NP_126844.1| - 1.9e-30 106.2 1.2 3.4e-30 105.3 1.2 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|14521368|ref|NP_126844.1| - 2.3e-08 34.0 0.0 1e-07 31.9 0.0 2.0 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain F420_oxidored PF03807.17 gi|14521368|ref|NP_126844.1| - 0.0002 21.9 0.5 0.00067 20.2 0.1 2.1 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|14521368|ref|NP_126844.1| - 0.0026 18.0 1.8 0.07 13.3 0.2 2.5 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF4441 PF14536.6 gi|14521368|ref|NP_126844.1| - 0.015 15.5 0.3 0.4 10.9 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4441) CoA_binding PF02629.19 gi|14521368|ref|NP_126844.1| - 0.078 13.7 0.2 0.078 13.7 0.2 2.2 2 1 0 2 2 2 0 CoA binding domain UDPG_MGDP_dh_N PF03721.14 gi|14521369|ref|NP_126845.1| - 1.4e-41 142.2 0.6 2.3e-41 141.4 0.6 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 gi|14521369|ref|NP_126845.1| - 3.3e-26 91.7 0.3 2.2e-25 89.1 0.1 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 gi|14521369|ref|NP_126845.1| - 7e-22 77.4 0.0 1.4e-21 76.5 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 gi|14521369|ref|NP_126845.1| - 9e-10 38.9 0.8 4.4e-09 36.7 0.4 2.3 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|14521369|ref|NP_126845.1| - 4.4e-08 33.2 0.4 2.4e-05 24.3 0.1 2.8 3 0 0 3 3 3 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 gi|14521369|ref|NP_126845.1| - 8.8e-06 25.2 0.1 0.018 14.4 0.1 2.7 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|14521369|ref|NP_126845.1| - 1.3e-05 25.2 0.2 3.3e-05 23.9 0.2 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|14521369|ref|NP_126845.1| - 0.00028 21.1 1.8 0.039 14.2 0.3 3.5 3 1 0 3 3 3 1 TrkA-N domain ApbA PF02558.16 gi|14521369|ref|NP_126845.1| - 0.0029 17.3 0.1 0.0053 16.4 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DUF4258 PF14076.6 gi|14521369|ref|NP_126845.1| - 0.022 15.1 0.2 0.24 11.8 0.0 2.7 2 2 0 2 2 2 0 Domain of unknown function (DUF4258) DpaA_N PF16924.5 gi|14521369|ref|NP_126845.1| - 0.025 14.6 0.2 2.3 8.3 0.0 3.3 3 1 0 3 3 2 0 Dipicolinate synthase subunit A N-terminal domain AlaDh_PNT_C PF01262.21 gi|14521369|ref|NP_126845.1| - 0.039 13.2 1.5 0.079 12.2 0.6 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|14521369|ref|NP_126845.1| - 0.049 14.2 1.4 0.84 10.3 1.4 3.0 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DFP PF04127.15 gi|14521369|ref|NP_126845.1| - 0.069 13.0 0.2 0.8 9.5 0.1 2.3 1 1 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein SRR1 PF07985.12 gi|14521369|ref|NP_126845.1| - 0.082 13.0 0.0 0.23 11.5 0.0 1.7 2 0 0 2 2 2 0 SRR1 PIN_2 PF10130.9 gi|14521370|ref|NP_126846.1| - 5.3e-23 81.7 0.0 6e-23 81.5 0.0 1.0 1 0 0 1 1 1 1 PIN domain PIN PF01850.21 gi|14521371|ref|NP_126847.1| - 4.8e-16 59.4 0.1 5.5e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 PIN domain DUF234 PF03008.14 gi|14521372|ref|NP_126848.1| - 3.8e-30 104.3 1.3 1.2e-29 102.7 0.3 2.3 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function ATPase_2 PF01637.18 gi|14521372|ref|NP_126848.1| - 2.6e-25 89.7 0.3 6.8e-25 88.3 0.3 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521372|ref|NP_126848.1| - 3.3e-09 36.9 0.0 6.2e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521372|ref|NP_126848.1| - 1.4e-08 35.3 0.1 4.4e-06 27.2 0.1 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521372|ref|NP_126848.1| - 2.3e-08 34.4 0.0 5.7e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain HTH_45 PF14947.6 gi|14521372|ref|NP_126848.1| - 0.0066 16.4 0.0 0.039 14.0 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix AAA_24 PF13479.6 gi|14521372|ref|NP_126848.1| - 0.016 14.9 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|14521372|ref|NP_126848.1| - 0.019 14.4 0.0 0.13 11.6 0.0 2.1 1 1 0 1 1 1 0 Bacterial TniB protein AAA PF00004.29 gi|14521372|ref|NP_126848.1| - 0.029 14.8 0.0 0.066 13.6 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|14521373|ref|NP_126849.1| - 3.7e-18 66.3 0.1 7.9e-18 65.2 0.0 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521373|ref|NP_126849.1| - 2.2e-06 27.7 0.1 6.4e-05 23.0 0.0 2.8 1 1 2 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|14521373|ref|NP_126849.1| - 0.0018 18.6 0.0 0.005 17.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|14521373|ref|NP_126849.1| - 0.017 15.5 0.0 0.28 11.6 0.0 2.7 2 1 0 2 2 2 0 AAA ATPase domain DUF815 PF05673.13 gi|14521373|ref|NP_126849.1| - 0.086 12.0 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DHH PF01368.20 gi|14521374|ref|NP_126850.1| - 3.4e-05 24.0 0.0 5.9e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.19 gi|14521374|ref|NP_126850.1| - 0.0013 19.2 0.5 0.0026 18.2 0.4 1.7 1 1 0 1 1 1 1 DHHA1 domain ATP-sulfurylase PF01747.17 gi|14521375|ref|NP_126851.1| - 2.5e-88 295.1 0.2 3.2e-88 294.7 0.2 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 gi|14521375|ref|NP_126851.1| - 5.5e-50 169.1 0.0 8.4e-50 168.5 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain Nudix_N_2 PF14803.6 gi|14521375|ref|NP_126851.1| - 1.3 9.0 3.4 0.82 9.6 0.6 2.0 2 0 0 2 2 2 0 Nudix N-terminal Phosphodiest PF01663.22 gi|14521376|ref|NP_126852.1| - 6.1e-70 236.6 0.2 7.4e-70 236.3 0.2 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|14521376|ref|NP_126852.1| - 0.0083 15.6 0.5 0.05 13.0 0.1 2.2 3 0 0 3 3 3 1 Sulfatase APS_kinase PF01583.20 gi|14521377|ref|NP_126853.1| - 6.8e-59 198.3 0.0 8.1e-59 198.0 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 gi|14521377|ref|NP_126853.1| - 5.9e-08 33.3 0.1 1.5e-07 32.0 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|14521377|ref|NP_126853.1| - 1.6e-07 31.6 0.0 2.1e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|14521377|ref|NP_126853.1| - 1e-06 28.6 0.0 1.5e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|14521377|ref|NP_126853.1| - 2.4e-06 27.6 0.0 3.2e-06 27.2 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain KTI12 PF08433.10 gi|14521377|ref|NP_126853.1| - 5.2e-06 26.1 0.0 6.1e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Chromatin associated protein KTI12 NTPase_1 PF03266.15 gi|14521377|ref|NP_126853.1| - 1.3e-05 25.1 0.1 2.3e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 NTPase ParA PF10609.9 gi|14521377|ref|NP_126853.1| - 2.6e-05 23.8 0.0 3.6e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|14521377|ref|NP_126853.1| - 0.00018 21.5 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|14521377|ref|NP_126853.1| - 0.00037 19.8 0.0 0.001 18.4 0.0 1.7 2 0 0 2 2 2 1 Zeta toxin NACHT PF05729.12 gi|14521377|ref|NP_126853.1| - 0.00039 20.4 0.4 0.00077 19.4 0.3 1.5 1 1 0 1 1 1 1 NACHT domain MobB PF03205.14 gi|14521377|ref|NP_126853.1| - 0.00055 19.8 0.1 0.001 19.0 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.6 gi|14521377|ref|NP_126853.1| - 0.00084 19.8 0.0 0.0014 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|14521377|ref|NP_126853.1| - 0.00095 18.9 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|14521377|ref|NP_126853.1| - 0.001 19.4 0.0 0.0015 18.9 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA PF00004.29 gi|14521377|ref|NP_126853.1| - 0.001 19.5 0.0 0.0015 19.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 gi|14521377|ref|NP_126853.1| - 0.0012 17.9 0.1 0.0022 17.0 0.1 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC_tran PF00005.27 gi|14521377|ref|NP_126853.1| - 0.0014 19.2 0.0 0.0019 18.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter Cytidylate_kin PF02224.18 gi|14521377|ref|NP_126853.1| - 0.0016 18.2 0.7 0.062 13.0 0.1 2.8 2 1 1 3 3 3 1 Cytidylate kinase AAA_28 PF13521.6 gi|14521377|ref|NP_126853.1| - 0.0017 18.6 0.1 0.0035 17.6 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_22 PF13401.6 gi|14521377|ref|NP_126853.1| - 0.0026 18.0 0.0 0.0037 17.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain PRK PF00485.18 gi|14521377|ref|NP_126853.1| - 0.0029 17.4 0.0 0.0083 15.9 0.0 1.7 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_24 PF13479.6 gi|14521377|ref|NP_126853.1| - 0.0035 17.1 0.1 0.0047 16.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|14521377|ref|NP_126853.1| - 0.0038 16.9 0.0 0.0053 16.5 0.0 1.4 1 0 0 1 1 1 1 Thymidylate kinase AAA_16 PF13191.6 gi|14521377|ref|NP_126853.1| - 0.0071 16.7 0.1 0.01 16.2 0.1 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|14521377|ref|NP_126853.1| - 0.0077 15.8 0.1 0.012 15.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|14521377|ref|NP_126853.1| - 0.0084 16.1 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Cytidylate_kin2 PF13189.6 gi|14521377|ref|NP_126853.1| - 0.0098 16.0 0.1 0.59 10.2 0.0 2.2 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_30 PF13604.6 gi|14521377|ref|NP_126853.1| - 0.014 15.1 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain MipZ PF09140.11 gi|14521377|ref|NP_126853.1| - 0.015 14.6 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ cobW PF02492.19 gi|14521377|ref|NP_126853.1| - 0.02 14.5 0.1 0.033 13.8 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TIP49 PF06068.13 gi|14521377|ref|NP_126853.1| - 0.021 14.0 0.1 0.035 13.3 0.0 1.4 2 0 0 2 2 1 0 TIP49 P-loop domain TsaE PF02367.17 gi|14521377|ref|NP_126853.1| - 0.022 14.7 0.1 0.038 14.0 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLP1_P PF16575.5 gi|14521377|ref|NP_126853.1| - 0.035 13.9 0.0 0.05 13.4 0.0 1.2 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_29 PF13555.6 gi|14521377|ref|NP_126853.1| - 0.038 13.7 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RuvB_N PF05496.12 gi|14521377|ref|NP_126853.1| - 0.04 13.6 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 gi|14521377|ref|NP_126853.1| - 0.046 13.6 0.1 0.058 13.3 0.1 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 gi|14521377|ref|NP_126853.1| - 0.047 13.6 0.0 0.077 12.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase KAP_NTPase PF07693.14 gi|14521377|ref|NP_126853.1| - 0.055 12.7 0.0 0.099 11.9 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain DUF2075 PF09848.9 gi|14521377|ref|NP_126853.1| - 0.057 12.7 0.0 0.07 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_14 PF13173.6 gi|14521377|ref|NP_126853.1| - 0.061 13.4 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain LpxK PF02606.14 gi|14521377|ref|NP_126853.1| - 0.068 12.3 0.1 0.12 11.5 0.1 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase NB-ARC PF00931.22 gi|14521377|ref|NP_126853.1| - 0.071 12.3 0.1 0.1 11.8 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain Parvo_NS1 PF01057.17 gi|14521377|ref|NP_126853.1| - 0.072 12.2 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|14521377|ref|NP_126853.1| - 0.089 12.2 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein Mg_chelatase PF01078.21 gi|14521377|ref|NP_126853.1| - 0.092 12.1 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|14521377|ref|NP_126853.1| - 0.1 12.5 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_7 PF12775.7 gi|14521377|ref|NP_126853.1| - 0.12 11.8 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ATP_bind_1 PF03029.17 gi|14521377|ref|NP_126853.1| - 0.14 12.0 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein CoaE PF01121.20 gi|14521377|ref|NP_126853.1| - 0.15 11.7 0.0 0.25 11.0 0.0 1.5 1 1 0 1 1 1 0 Dephospho-CoA kinase ArsA_ATPase PF02374.15 gi|14521377|ref|NP_126853.1| - 0.15 11.2 0.0 0.25 10.5 0.0 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase SKI PF01202.22 gi|14521377|ref|NP_126853.1| - 0.15 12.1 0.9 0.54 10.4 0.9 1.9 1 1 0 1 1 1 0 Shikimate kinase TrwB_AAD_bind PF10412.9 gi|14521377|ref|NP_126853.1| - 0.21 10.4 0.0 0.28 10.1 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain TauE PF01925.19 gi|14521378|ref|NP_126854.1| - 5e-40 137.6 32.0 5.8e-40 137.4 32.0 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3149 PF11346.8 gi|14521378|ref|NP_126854.1| - 0.096 12.3 0.0 0.096 12.3 0.0 3.6 5 0 0 5 5 5 0 Protein of unknown function (DUF3149) DUF3784 PF12650.7 gi|14521378|ref|NP_126854.1| - 0.42 10.8 0.2 0.42 10.8 0.2 4.4 4 1 2 6 6 6 0 Domain of unknown function (DUF3784) Polysacc_synt PF01943.17 gi|14521379|ref|NP_126855.1| - 7.7e-32 110.8 28.2 7.7e-32 110.8 28.2 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|14521379|ref|NP_126855.1| - 3.5e-30 105.2 18.9 3.5e-30 105.2 18.9 2.4 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|14521379|ref|NP_126855.1| - 8.4e-20 71.3 20.5 8.4e-20 71.3 20.5 4.4 3 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|14521379|ref|NP_126855.1| - 6.2e-14 52.0 28.9 2.5e-11 43.5 13.4 4.0 4 2 0 4 4 4 2 MatE MurJ PF03023.14 gi|14521379|ref|NP_126855.1| - 0.001 17.8 38.5 0.001 17.8 38.5 2.5 1 1 1 2 2 2 1 Lipid II flippase MurJ DUF5337 PF17272.2 gi|14521379|ref|NP_126855.1| - 8.3 6.3 6.5 12 5.8 0.1 3.4 3 0 0 3 3 3 0 Family of unknown function (DUF5337) NTP_transferase PF00483.23 gi|14521380|ref|NP_126856.1| - 1.8e-49 168.5 0.0 2.3e-49 168.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|14521380|ref|NP_126856.1| - 1.8e-08 34.9 0.0 2.6e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|14521380|ref|NP_126856.1| - 5.4e-08 32.3 13.0 9.9e-05 21.9 0.9 4.0 2 2 2 4 4 4 3 Bacterial transferase hexapeptide (six repeats) DUF4954 PF16314.5 gi|14521380|ref|NP_126856.1| - 0.057 11.5 4.0 0.083 11.0 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) GGA_N-GAT PF18308.1 gi|14521380|ref|NP_126856.1| - 0.17 11.5 0.0 0.44 10.2 0.0 1.6 1 0 0 1 1 1 0 GGA N-GAT domain GDP_Man_Dehyd PF16363.5 gi|14521381|ref|NP_126857.1| - 9.5e-86 288.2 0.0 1.1e-85 287.9 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|14521381|ref|NP_126857.1| - 4.9e-67 225.9 0.0 6.1e-67 225.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|14521381|ref|NP_126857.1| - 6.6e-24 84.4 0.0 8.7e-24 84.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|14521381|ref|NP_126857.1| - 1.6e-18 66.9 0.0 2.8e-18 66.0 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|14521381|ref|NP_126857.1| - 1.1e-14 54.3 0.0 6.5e-14 51.7 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|14521381|ref|NP_126857.1| - 1.7e-14 53.6 0.0 6.8e-13 48.4 0.0 2.5 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|14521381|ref|NP_126857.1| - 1.4e-07 31.6 0.0 2.4e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|14521381|ref|NP_126857.1| - 0.00023 20.8 0.0 0.00038 20.1 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.25 gi|14521381|ref|NP_126857.1| - 0.00027 20.4 0.0 0.0032 17.0 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|14521381|ref|NP_126857.1| - 0.012 15.5 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 KR domain Sacchrp_dh_NADP PF03435.18 gi|14521381|ref|NP_126857.1| - 0.031 14.5 0.0 0.056 13.7 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain QslA_E PF18226.1 gi|14521381|ref|NP_126857.1| - 0.15 11.9 1.3 0.32 10.9 1.3 1.5 1 0 0 1 1 1 0 LasR-specific antiactivator QslA chain E DUF104 PF01954.16 gi|33356758|ref|NP_877669.1| - 9.1e-14 51.6 1.0 1e-13 51.5 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF104 DUF1967 PF09269.11 gi|33356758|ref|NP_877669.1| - 0.067 13.1 0.0 0.078 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) DUF2281 PF10047.9 gi|14521382|ref|NP_126858.1| - 1.8e-19 70.2 2.8 2.2e-19 69.9 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2281) PIN PF01850.21 gi|14521383|ref|NP_126859.1| - 2.2e-15 57.3 0.1 2.4e-15 57.1 0.1 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|14521383|ref|NP_126859.1| - 0.025 14.3 0.0 0.057 13.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) dTDP_sugar_isom PF00908.17 gi|14521384|ref|NP_126860.1| - 2.2e-78 261.7 0.0 2.5e-78 261.6 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase PIN PF01850.21 gi|14521385|ref|NP_126861.1| - 9.5e-21 74.5 0.1 1.7e-20 73.7 0.1 1.4 1 1 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|14521385|ref|NP_126861.1| - 0.053 14.0 0.1 0.11 13.0 0.1 1.6 1 0 0 1 1 1 0 PIN domain RmlD_sub_bind PF04321.17 gi|14521386|ref|NP_126862.1| - 2.7e-87 292.5 0.0 3.2e-87 292.3 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|14521386|ref|NP_126862.1| - 3.8e-22 78.9 0.0 5e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|14521386|ref|NP_126862.1| - 7.7e-17 61.7 0.0 9.3e-17 61.4 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|14521386|ref|NP_126862.1| - 7.7e-11 41.7 0.5 4.9e-10 39.0 0.1 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|14521386|ref|NP_126862.1| - 1.4e-06 27.7 0.1 3.8e-06 26.3 0.1 1.7 1 1 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 gi|14521386|ref|NP_126862.1| - 0.0068 15.4 0.8 0.016 14.2 0.1 1.9 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.20 gi|14521386|ref|NP_126862.1| - 0.15 12.2 0.0 0.53 10.4 0.0 1.9 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus AlbA_2 PF04326.14 gi|14521387|ref|NP_126863.1| - 6.8e-16 58.7 0.0 1.2e-15 58.0 0.0 1.4 1 0 0 1 1 1 1 Putative DNA-binding domain MarR PF01047.22 gi|14521388|ref|NP_126864.1| - 1.1e-05 25.3 0.0 1.4e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|14521388|ref|NP_126864.1| - 2.8e-05 23.6 0.0 4.7e-05 22.9 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 gi|14521388|ref|NP_126864.1| - 9.4e-05 22.1 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|14521388|ref|NP_126864.1| - 0.00012 21.9 0.3 0.00014 21.6 0.3 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|14521388|ref|NP_126864.1| - 0.0026 17.5 0.0 0.0034 17.1 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14521388|ref|NP_126864.1| - 0.0059 16.6 0.0 0.0066 16.4 0.0 1.2 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|14521388|ref|NP_126864.1| - 0.0062 16.4 0.1 0.0068 16.3 0.1 1.3 1 1 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|14521388|ref|NP_126864.1| - 0.014 15.3 0.0 0.025 14.5 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain AbiEi_4 PF13338.6 gi|14521388|ref|NP_126864.1| - 0.016 15.4 2.3 0.051 13.7 0.5 2.4 2 1 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin GntR PF00392.21 gi|14521388|ref|NP_126864.1| - 0.018 14.7 0.1 0.024 14.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF977 PF06163.11 gi|14521388|ref|NP_126864.1| - 0.023 14.6 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) Phage_rep_O PF04492.13 gi|14521388|ref|NP_126864.1| - 0.024 15.2 0.0 0.027 15.0 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage replication protein O HTH_42 PF06224.12 gi|14521388|ref|NP_126864.1| - 0.096 12.2 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|14521388|ref|NP_126864.1| - 0.11 12.6 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2089 PF09862.9 gi|14521388|ref|NP_126864.1| - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) FeoC PF09012.10 gi|14521388|ref|NP_126864.1| - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 FeoC like transcriptional regulator Polysacc_synt PF01943.17 gi|14521389|ref|NP_126865.1| - 3.6e-21 75.8 20.9 4e-21 75.6 20.9 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|14521389|ref|NP_126865.1| - 2.5e-13 49.9 12.7 3e-13 49.6 12.7 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Rab5ip PF07019.12 gi|14521389|ref|NP_126865.1| - 1.1 9.9 8.6 0.36 11.5 4.0 2.5 1 1 1 2 2 2 0 Rab5-interacting protein (Rab5ip) Sulfatase PF00884.23 gi|14521390|ref|NP_126866.1| - 7.3e-39 134.0 0.0 5.1e-37 127.9 0.0 2.1 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 gi|14521390|ref|NP_126866.1| - 1.5e-09 37.9 0.1 0.0018 17.9 0.1 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4976 PF16347.5 gi|14521390|ref|NP_126866.1| - 0.0039 17.4 0.3 0.012 15.9 0.3 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) DUF229 PF02995.17 gi|14521390|ref|NP_126866.1| - 0.012 14.2 0.0 0.12 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF229) Phosphoesterase PF04185.14 gi|14521390|ref|NP_126866.1| - 0.034 13.3 0.0 0.084 12.1 0.0 1.7 2 0 0 2 2 2 0 Phosphoesterase family Sulfatase_C PF14707.6 gi|14521390|ref|NP_126866.1| - 0.043 14.6 0.0 0.099 13.4 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase DUF3867 PF12983.7 gi|14521391|ref|NP_126867.1| - 0.0073 16.4 2.0 0.0092 16.0 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3867) DUF4883 PF16224.5 gi|14521391|ref|NP_126867.1| - 0.017 15.4 2.4 0.026 14.8 2.3 1.4 1 1 0 1 1 1 0 DOmain of unknown function (DUF4883) DUF2206 PF09971.9 gi|14521392|ref|NP_126868.1| - 2.9e-61 207.3 16.5 2.9e-61 207.3 16.5 3.6 1 1 2 4 4 4 1 Predicted membrane protein (DUF2206) DUF1616 PF07760.11 gi|14521392|ref|NP_126868.1| - 3.2e-06 26.8 7.6 3.2e-06 26.8 7.6 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1616) Glycos_transf_2 PF00535.26 gi|14521393|ref|NP_126869.1| - 1.1e-22 80.6 0.8 4.5e-11 42.8 0.3 2.4 1 1 1 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521393|ref|NP_126869.1| - 2e-22 80.3 0.0 4e-15 56.3 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|14521393|ref|NP_126869.1| - 2.9e-11 43.7 1.0 3.6e-10 40.1 1.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_5 PF13712.6 gi|14521393|ref|NP_126869.1| - 0.00015 21.5 0.1 0.00061 19.5 0.1 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_tranf_2_2 PF10111.9 gi|14521393|ref|NP_126869.1| - 0.0059 16.1 0.3 3.7 7.0 0.0 2.8 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|14521393|ref|NP_126869.1| - 0.012 15.1 0.0 0.028 13.9 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 21 Inj_translocase PF16928.5 gi|14521393|ref|NP_126869.1| - 0.18 11.2 0.1 0.29 10.5 0.1 1.3 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Glycos_transf_2 PF00535.26 gi|14521394|ref|NP_126870.1| - 3.1e-25 88.9 0.0 4.7e-25 88.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|14521394|ref|NP_126870.1| - 4.4e-13 49.3 0.0 6.4e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|14521394|ref|NP_126870.1| - 7.1e-11 42.4 0.0 1.9e-10 41.0 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|14521394|ref|NP_126870.1| - 1.4e-08 34.9 0.0 1.8e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|14521394|ref|NP_126870.1| - 8.5e-05 22.1 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|14521394|ref|NP_126870.1| - 0.00028 21.3 0.0 0.0013 19.2 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 DUF354 PF04007.12 gi|14521395|ref|NP_126871.1| - 2.9e-30 105.5 0.0 4.5e-30 104.9 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF354) PIN_12 PF16289.5 gi|14521395|ref|NP_126871.1| - 0.00051 20.6 0.0 0.001 19.6 0.0 1.4 1 0 0 1 1 1 1 PIN domain DUF1972 PF09314.11 gi|14521396|ref|NP_126872.1| - 4.6e-17 62.2 0.4 1.3e-16 60.7 0.4 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF1972) Glycos_transf_2 PF00535.26 gi|14521397|ref|NP_126873.1| - 8e-19 68.1 0.0 1e-18 67.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521397|ref|NP_126873.1| - 6.6e-08 32.7 0.0 7.1e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|14521397|ref|NP_126873.1| - 0.011 15.2 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 STT3 PF02516.14 gi|14521398|ref|NP_126874.1| - 0.00045 19.3 36.2 0.0056 15.7 36.2 2.6 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PIN PF01850.21 gi|14521399|ref|NP_126875.1| - 4.2e-06 27.3 1.7 0.00012 22.6 1.7 2.1 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|14521399|ref|NP_126875.1| - 0.00066 19.4 0.0 0.00093 18.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) DUF2118 PF09891.9 gi|14521400|ref|NP_126876.1| - 4.9e-50 169.4 1.9 5.5e-50 169.2 1.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) YjzC PF14168.6 gi|14521400|ref|NP_126876.1| - 0.075 13.4 0.0 3.1 8.2 0.0 2.8 3 0 0 3 3 3 0 YjzC-like protein Biotin_lipoyl PF00364.22 gi|14521400|ref|NP_126876.1| - 0.13 12.1 0.0 0.59 10.0 0.0 2.1 3 0 0 3 3 3 0 Biotin-requiring enzyme Acetyltransf_1 PF00583.25 gi|14521401|ref|NP_126877.1| - 7.6e-16 58.4 0.1 1.4e-15 57.6 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|14521401|ref|NP_126877.1| - 3.5e-10 40.2 0.2 6.8e-10 39.2 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|14521401|ref|NP_126877.1| - 4.1e-06 27.5 0.0 7e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|14521401|ref|NP_126877.1| - 2.7e-05 24.1 0.0 5.1e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|14521401|ref|NP_126877.1| - 7.9e-05 22.6 0.0 0.00013 21.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|14521401|ref|NP_126877.1| - 0.00045 20.3 0.0 0.0017 18.4 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|14521401|ref|NP_126877.1| - 0.014 15.5 0.0 0.03 14.4 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|14521401|ref|NP_126877.1| - 0.067 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|14521401|ref|NP_126877.1| - 0.19 11.5 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF234 PF03008.14 gi|14521402|ref|NP_126878.1| - 8e-28 96.8 1.2 2.2e-27 95.4 0.1 2.3 3 0 0 3 3 3 1 Archaea bacterial proteins of unknown function ATPase_2 PF01637.18 gi|14521402|ref|NP_126878.1| - 3.7e-24 85.9 0.9 3.7e-23 82.6 0.9 2.3 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521402|ref|NP_126878.1| - 2.3e-09 37.4 0.0 6.4e-09 35.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521402|ref|NP_126878.1| - 2.9e-06 27.8 0.5 2e-05 25.1 0.2 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521402|ref|NP_126878.1| - 3.7e-06 27.3 0.0 7.3e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain HTH_5 PF01022.20 gi|14521402|ref|NP_126878.1| - 0.00026 20.8 0.0 0.00065 19.5 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|14521402|ref|NP_126878.1| - 0.0087 15.9 0.1 0.022 14.6 0.1 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TniB PF05621.11 gi|14521402|ref|NP_126878.1| - 0.03 13.7 0.0 0.17 11.3 0.0 2.1 1 1 0 1 1 1 0 Bacterial TniB protein RE_TdeIII PF09520.10 gi|14521402|ref|NP_126878.1| - 0.055 13.1 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 Type II restriction endonuclease, TdeIII JmjN PF02375.17 gi|14521402|ref|NP_126878.1| - 0.066 13.2 0.1 4.5 7.3 0.0 3.4 3 0 0 3 3 3 0 jmjN domain HTH_IclR PF09339.10 gi|14521402|ref|NP_126878.1| - 0.077 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|14521402|ref|NP_126878.1| - 0.14 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 MarR family DUF4143 PF13635.6 gi|14521402|ref|NP_126878.1| - 0.16 12.1 0.0 0.36 11.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4143) DUF104 PF01954.16 gi|14521403|ref|NP_126879.1| - 1e-15 57.9 7.9 1.2e-15 57.7 7.9 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF104 RTP PF02334.16 gi|14521403|ref|NP_126879.1| - 0.052 14.2 0.4 0.061 14.0 0.4 1.0 1 0 0 1 1 1 0 Replication terminator protein AFOR_C PF01314.18 gi|14521404|ref|NP_126880.1| - 7.2e-110 367.6 0.3 8.8e-110 367.3 0.3 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|14521404|ref|NP_126880.1| - 3.1e-79 265.4 1.3 5.1e-79 264.7 1.3 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain ATPase_2 PF01637.18 gi|14521405|ref|NP_126881.1| - 1.4e-58 198.6 0.7 2e-58 198.1 0.7 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|14521405|ref|NP_126881.1| - 3.5e-06 27.5 0.0 1.4e-05 25.5 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|14521405|ref|NP_126881.1| - 0.00036 20.6 0.2 0.03 14.3 0.2 2.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|14521405|ref|NP_126881.1| - 0.0023 18.2 0.0 0.0084 16.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14521405|ref|NP_126881.1| - 0.017 15.6 0.0 0.41 11.1 0.0 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TK PF00265.18 gi|14521405|ref|NP_126881.1| - 0.027 14.4 0.0 0.045 13.6 0.0 1.4 1 0 0 1 1 1 0 Thymidine kinase TniB PF05621.11 gi|14521405|ref|NP_126881.1| - 0.063 12.7 0.1 0.31 10.4 0.1 2.0 1 1 0 1 1 1 0 Bacterial TniB protein SIR2 PF02146.17 gi|14521406|ref|NP_126882.1| - 1.2e-59 201.2 0.0 1.4e-59 201.0 0.0 1.1 1 0 0 1 1 1 1 Sir2 family Zn-ribbon_8 PF09723.10 gi|14521406|ref|NP_126882.1| - 0.014 15.5 0.6 0.031 14.4 0.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain TPP_enzyme_M PF00205.22 gi|14521406|ref|NP_126882.1| - 0.051 13.3 0.0 0.51 10.1 0.0 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain zf-ribbon_3 PF13248.6 gi|14521406|ref|NP_126882.1| - 0.21 11.1 0.2 0.21 11.1 0.2 1.9 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_7 PF02591.15 gi|14521406|ref|NP_126882.1| - 0.25 11.6 0.8 0.48 10.7 0.1 1.9 2 0 0 2 2 2 0 C4-type zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|14521406|ref|NP_126882.1| - 0.38 10.7 1.9 4.5 7.3 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain MNHE PF01899.16 gi|14521407|ref|NP_126883.1| - 4.1e-37 127.2 2.3 5.2e-37 126.8 2.3 1.1 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit MrpF_PhaF PF04066.13 gi|14521408|ref|NP_126884.1| - 3.2e-14 53.0 0.3 3.2e-14 53.0 0.3 2.0 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) PNTB_4TM PF12769.7 gi|14521408|ref|NP_126884.1| - 0.22 12.0 4.1 1.3 9.6 4.1 1.9 1 1 0 1 1 1 0 4TM region of pyridine nucleotide transhydrogenase, mitoch PhaG_MnhG_YufB PF03334.14 gi|14521409|ref|NP_126885.1| - 2.9e-24 85.1 5.8 3.6e-24 84.8 5.8 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit DUF4040 PF13244.6 gi|14521410|ref|NP_126886.1| - 2e-11 43.8 9.7 2e-11 43.8 9.7 1.8 3 0 0 3 3 3 1 Domain of unknown function (DUF4040) SUR7 PF06687.12 gi|14521410|ref|NP_126886.1| - 0.18 11.4 6.2 0.27 10.9 6.2 1.3 1 0 0 1 1 1 0 SUR7/PalI family DUF2108 PF09881.9 gi|14521410|ref|NP_126886.1| - 0.39 10.7 8.1 0.68 9.9 8.1 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2108) DUF2070 PF09843.9 gi|14521410|ref|NP_126886.1| - 6.2 5.0 8.4 7.3 4.7 8.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MnhB PF04039.13 gi|14521411|ref|NP_126887.1| - 7.5e-21 74.7 8.3 1.2e-20 74.1 8.3 1.3 1 1 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter ORC4_C PF14629.6 gi|14521411|ref|NP_126887.1| - 0.076 12.4 0.0 0.087 12.2 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus MNHE PF01899.16 gi|14521411|ref|NP_126887.1| - 1 9.1 5.7 15 5.3 5.7 2.1 1 1 0 1 1 1 0 Na+/H+ ion antiporter subunit DUF2304 PF10066.9 gi|14521411|ref|NP_126887.1| - 4.4 7.6 10.6 3.1 8.1 7.2 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Oxidored_q2 PF00420.24 gi|33356768|ref|NP_126888.2| - 8.2e-14 51.1 1.0 9.4e-14 50.9 1.0 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF4418 PF14387.6 gi|33356768|ref|NP_126888.2| - 0.0056 16.9 0.5 0.0056 16.9 0.5 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4418) DUF2108 PF09881.9 gi|33356768|ref|NP_126888.2| - 0.014 15.4 1.1 0.014 15.4 1.1 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF2107 PF09880.9 gi|33356768|ref|NP_126888.2| - 0.053 13.6 5.5 0.067 13.3 1.4 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2107) Proton_antipo_M PF00361.20 gi|14521413|ref|NP_126889.1| - 3.7e-39 134.7 19.4 3.7e-39 134.7 19.4 2.0 2 0 0 2 2 2 1 Proton-conducting membrane transporter NADHdeh_related PF10125.9 gi|14521413|ref|NP_126889.1| - 7.7e-05 22.2 0.9 7.7e-05 22.2 0.9 1.9 2 0 0 2 2 2 1 NADH dehydrogenase I, subunit N related protein DUF3800 PF12686.7 gi|14521414|ref|NP_126890.1| - 2.4e-12 47.5 0.3 4.1e-12 46.8 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3800) Csd3_N PF18059.1 gi|14521414|ref|NP_126890.1| - 0.12 12.9 1.1 50 4.5 0.0 3.1 2 1 1 3 3 3 0 Csd3 N-terminal Peptidase_M23 PF01551.22 gi|14521415|ref|NP_126891.1| - 0.014 15.6 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M23 RuBisCO_large PF00016.20 gi|14521416|ref|NP_126892.1| - 1.1e-92 310.4 0.0 1.7e-92 309.8 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 gi|14521416|ref|NP_126892.1| - 1.8e-41 141.0 0.0 7.9e-41 139.0 0.0 2.1 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain B12-binding PF02310.19 gi|14521416|ref|NP_126892.1| - 0.091 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 B12 binding domain Radical_SAM PF04055.21 gi|14521417|ref|NP_126893.1| - 2.4e-12 47.6 1.2 1.9e-08 34.9 0.4 2.5 1 1 1 2 2 2 2 Radical SAM superfamily Asn_synthase PF00733.21 gi|14521417|ref|NP_126893.1| - 0.075 12.7 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Asparagine synthase Pyridoxal_deC PF00282.19 gi|14521418|ref|NP_126894.1| - 8.7e-38 130.0 0.0 3.4e-37 128.0 0.0 1.7 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|14521418|ref|NP_126894.1| - 1e-14 54.3 0.0 9.5e-14 51.1 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|14521418|ref|NP_126894.1| - 1.6e-09 37.6 0.0 2.3e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|14521418|ref|NP_126894.1| - 5.2e-08 32.5 0.0 7.5e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase SepSecS PF05889.13 gi|14521418|ref|NP_126894.1| - 6.8e-06 25.0 0.0 0.00075 18.3 0.0 2.3 2 0 0 2 2 2 2 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_1_2 PF00155.21 gi|14521418|ref|NP_126894.1| - 5.9e-05 22.4 0.0 0.00031 20.0 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class I and II Radical_SAM PF04055.21 gi|14521418|ref|NP_126894.1| - 0.079 13.3 0.7 4.6 7.6 0.1 3.0 2 2 0 3 3 3 0 Radical SAM superfamily DUF1269 PF06897.12 gi|14521419|ref|NP_126895.1| - 0.0074 16.6 1.7 0.022 15.1 0.1 2.4 3 0 0 3 3 3 1 Protein of unknown function (DUF1269) PhoR PF11808.8 gi|14521419|ref|NP_126895.1| - 0.14 12.6 0.0 0.14 12.6 0.0 2.8 4 0 0 4 4 4 0 Phosphate regulon sensor protein PhoR HAD_2 PF13419.6 gi|14521420|ref|NP_126896.1| - 2.8e-23 82.9 0.6 3.9e-23 82.4 0.6 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521420|ref|NP_126896.1| - 8.7e-12 45.8 0.1 4.8e-11 43.3 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14521420|ref|NP_126896.1| - 2.6e-09 37.0 0.0 7.7e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|14521420|ref|NP_126896.1| - 1.4e-06 28.8 0.1 2.7e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.18 gi|14521420|ref|NP_126896.1| - 0.00037 20.3 1.8 0.00075 19.3 1.8 1.5 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase PGP_phosphatase PF09419.10 gi|14521420|ref|NP_126896.1| - 0.0015 18.1 0.7 0.013 15.1 0.1 2.5 2 1 0 2 2 2 1 Mitochondrial PGP phosphatase Acid_PPase PF12689.7 gi|14521420|ref|NP_126896.1| - 0.0055 16.6 0.1 0.36 10.7 0.0 2.3 2 0 0 2 2 2 1 Acid Phosphatase NT5C PF06941.12 gi|14521420|ref|NP_126896.1| - 0.029 14.3 0.9 0.62 9.9 0.0 2.3 2 0 0 2 2 2 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.6 gi|14521420|ref|NP_126896.1| - 0.097 12.8 0.0 0.31 11.2 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF131 PF01998.17 gi|14521421|ref|NP_126897.1| - 6.7e-16 57.7 2.5 6.7e-16 57.7 2.5 2.1 2 0 0 2 2 2 1 Protein of unknown function DUF131 SdpI PF13630.6 gi|14521421|ref|NP_126897.1| - 0.86 9.8 13.5 0.44 10.7 3.4 2.1 2 0 0 2 2 2 0 SdpI/YhfL protein family DUF2207 PF09972.9 gi|14521421|ref|NP_126897.1| - 1.1 7.9 7.3 1.3 7.7 7.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Claudin_2 PF13903.6 gi|14521421|ref|NP_126897.1| - 1.7 8.4 10.7 0.71 9.6 1.3 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF4342 PF14242.6 gi|14521421|ref|NP_126897.1| - 8.8 6.4 9.5 1.9 8.5 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) Na_H_Exchanger PF00999.21 gi|14521422|ref|NP_126898.1| - 2.1e-54 184.8 46.3 2.7e-54 184.4 46.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF87 PF01935.17 gi|14521423|ref|NP_126899.1| - 3.5e-54 184.3 0.3 6.7e-54 183.4 0.1 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|14521423|ref|NP_126899.1| - 6.1e-16 58.3 1.3 3.8e-15 55.8 1.3 2.5 1 0 0 1 1 1 1 HAS barrel domain DUF853 PF05872.12 gi|14521423|ref|NP_126899.1| - 1.1e-08 34.1 0.0 1.2e-05 24.1 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|14521423|ref|NP_126899.1| - 0.00016 20.7 0.0 0.0028 16.6 0.0 2.1 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 gi|14521423|ref|NP_126899.1| - 0.048 13.0 0.1 3 7.1 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family Metallophos PF00149.28 gi|14521424|ref|NP_126900.1| - 1.8e-14 54.8 0.6 2.9e-14 54.0 0.3 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|14521424|ref|NP_126900.1| - 1.2e-12 48.3 0.0 3.2e-12 46.9 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain AAA_23 PF13476.6 gi|14521425|ref|NP_126901.1| - 1.5e-21 77.8 9.1 1.5e-21 77.8 9.1 7.9 1 1 4 6 6 3 1 AAA domain AAA_15 PF13175.6 gi|14521425|ref|NP_126901.1| - 3.4e-15 56.6 91.1 4.8e-11 43.0 35.6 4.3 1 1 2 4 4 4 2 AAA ATPase domain SMC_N PF02463.19 gi|14521425|ref|NP_126901.1| - 9.2e-15 54.7 35.2 1.6e-11 44.1 0.1 2.7 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain Rad50_zn_hook PF04423.14 gi|14521425|ref|NP_126901.1| - 2.8e-14 52.7 8.2 2.8e-14 52.7 8.2 10.5 11 2 1 12 12 9 1 Rad50 zinc hook motif AAA_21 PF13304.6 gi|14521425|ref|NP_126901.1| - 8.6e-12 45.5 17.4 3.1e-07 30.5 10.5 4.0 1 1 1 4 4 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|14521425|ref|NP_126901.1| - 1.9e-09 37.1 0.0 3.2e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain Baculo_PEP_C PF04513.12 gi|14521425|ref|NP_126901.1| - 1.4e-08 34.9 15.9 0.046 13.8 0.6 6.5 3 2 3 6 6 6 2 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 gi|14521425|ref|NP_126901.1| - 2.2e-08 34.4 31.4 0.046 14.2 1.7 9.2 2 2 7 9 9 9 3 Nucleopolyhedrovirus P10 protein AAA_13 PF13166.6 gi|14521425|ref|NP_126901.1| - 1.8e-06 27.0 96.2 0.026 13.2 28.7 5.7 2 1 2 4 4 4 3 AAA domain Tropomyosin_1 PF12718.7 gi|14521425|ref|NP_126901.1| - 0.0001 22.5 18.1 0.0001 22.5 18.1 6.6 2 2 4 6 6 5 2 Tropomyosin like EzrA PF06160.12 gi|14521425|ref|NP_126901.1| - 0.00014 20.2 112.1 0.003 15.8 32.4 4.1 1 1 3 4 4 4 3 Septation ring formation regulator, EzrA SbcCD_C PF13558.6 gi|14521425|ref|NP_126901.1| - 0.00054 20.2 0.0 0.0019 18.4 0.0 1.9 2 0 0 2 2 1 1 Putative exonuclease SbcCD, C subunit Spc7 PF08317.11 gi|14521425|ref|NP_126901.1| - 0.0013 17.7 128.6 0.074 11.9 19.7 5.8 1 1 6 7 7 7 5 Spc7 kinetochore protein Serine_rich PF08824.10 gi|14521425|ref|NP_126901.1| - 0.003 17.6 5.6 0.003 17.6 5.6 6.2 3 2 3 7 7 6 1 Serine rich protein interaction domain DUF1664 PF07889.12 gi|14521425|ref|NP_126901.1| - 0.0058 16.7 73.7 0.042 13.9 1.7 8.7 2 2 4 8 8 8 4 Protein of unknown function (DUF1664) Exonuc_VII_L PF02601.15 gi|14521425|ref|NP_126901.1| - 0.06 12.9 73.9 0.11 12.1 9.8 5.0 1 1 3 4 4 4 0 Exonuclease VII, large subunit Seryl_tRNA_N PF02403.22 gi|14521425|ref|NP_126901.1| - 0.098 12.9 133.5 0.11 12.7 12.5 8.4 2 2 5 7 7 7 0 Seryl-tRNA synthetase N-terminal domain PilJ PF13675.6 gi|14521425|ref|NP_126901.1| - 0.1 12.6 18.0 1.8 8.6 1.3 5.4 4 2 2 6 6 6 0 Type IV pili methyl-accepting chemotaxis transducer N-term RsgA_GTPase PF03193.16 gi|14521425|ref|NP_126901.1| - 0.16 11.9 0.0 0.16 11.9 0.0 4.9 5 2 0 6 6 6 0 RsgA GTPase ABC_tran PF00005.27 gi|14521425|ref|NP_126901.1| - 0.18 12.3 31.8 1.8e+04 -14.0 31.8 6.0 1 1 0 1 1 0 0 ABC transporter FtsK_SpoIIIE PF01580.18 gi|14521425|ref|NP_126901.1| - 0.35 10.2 13.0 0.79 9.0 0.0 4.5 3 1 1 4 4 4 0 FtsK/SpoIIIE family AAA_16 PF13191.6 gi|14521425|ref|NP_126901.1| - 0.41 11.0 0.0 0.41 11.0 0.0 3.9 2 1 0 2 2 1 0 AAA ATPase domain HMMR_N PF15905.5 gi|14521425|ref|NP_126901.1| - 0.45 9.9 135.3 0.06 12.8 58.0 4.3 1 1 3 4 4 4 0 Hyaluronan mediated motility receptor N-terminal GAS PF13851.6 gi|14521425|ref|NP_126901.1| - 0.45 9.8 142.5 0.27 10.6 20.1 7.2 2 2 5 7 7 7 0 Growth-arrest specific micro-tubule binding T3SSipB PF16535.5 gi|14521425|ref|NP_126901.1| - 1.1 9.7 44.7 0.83 10.1 8.0 6.8 2 2 4 6 6 6 0 Type III cell invasion protein SipB DUF3584 PF12128.8 gi|14521425|ref|NP_126901.1| - 1.1 6.6 101.0 0.036 11.6 39.0 3.6 2 1 1 4 4 4 0 Protein of unknown function (DUF3584) DUF948 PF06103.11 gi|14521425|ref|NP_126901.1| - 1.5 9.2 33.0 1.2 9.5 2.3 7.7 6 3 2 8 8 8 0 Bacterial protein of unknown function (DUF948) Laminin_I PF06008.14 gi|14521425|ref|NP_126901.1| - 7.1 6.2 86.1 0.066 12.9 27.7 4.4 1 1 3 4 4 3 0 Laminin Domain I APG17 PF04108.12 gi|14521425|ref|NP_126901.1| - 8.7 5.3 71.8 71 2.3 26.4 5.2 1 1 1 2 2 2 0 Autophagy protein Apg17 NurA PF09376.10 gi|14521426|ref|NP_126902.1| - 7.8e-54 182.9 2.9 9.8e-54 182.6 2.9 1.1 1 0 0 1 1 1 1 NurA domain SWIRM-assoc_3 PF16498.5 gi|14521426|ref|NP_126902.1| - 0.026 14.7 0.0 0.99 9.7 0.0 2.4 2 0 0 2 2 2 0 SWIRM-associated domain at the C-terminal Cytidylate_kin2 PF13189.6 gi|14521426|ref|NP_126902.1| - 0.12 12.5 0.1 1 9.5 0.0 2.3 1 1 1 2 2 2 0 Cytidylate kinase-like family DUF5449 PF17528.2 gi|14521427|ref|NP_126903.1| - 0.022 14.5 0.1 0.023 14.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5449) Cytokin_check_N PF10407.9 gi|14521427|ref|NP_126903.1| - 0.028 14.4 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus MazE_antitoxin PF04014.18 gi|14521429|ref|NP_126905.1| - 3.6e-06 26.8 0.7 1.5e-05 24.8 0.3 2.1 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin eIF-1a PF01176.19 gi|14521429|ref|NP_126905.1| - 0.0071 16.1 0.1 0.018 14.9 0.1 1.9 2 1 0 2 2 2 1 Translation initiation factor 1A / IF-1 PrlF_antitoxin PF15937.5 gi|14521429|ref|NP_126905.1| - 0.11 13.0 0.1 1.4 9.4 0.0 2.1 2 0 0 2 2 2 0 prlF antitoxin for toxin YhaV_toxin Sigma70_r1_2 PF00140.20 gi|14521429|ref|NP_126905.1| - 0.16 12.0 1.7 0.19 11.8 0.1 1.9 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 Polbeta PF18765.1 gi|14521430|ref|NP_126906.1| - 1.6e-06 28.1 0.0 2.3e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|14521430|ref|NP_126906.1| - 0.0031 17.8 0.0 0.0057 16.9 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain Sarcoglycan_2 PF05510.13 gi|14521430|ref|NP_126906.1| - 0.079 11.7 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon MASE3 PF17159.4 gi|14521431|ref|NP_126907.1| - 0.54 9.9 23.5 0.16 11.5 16.4 3.0 1 1 1 2 2 2 0 Membrane-associated sensor domain Osmo_MPGsynth PF09488.10 gi|14521432|ref|NP_126908.1| - 1.1e-153 511.6 0.2 1.2e-153 511.5 0.2 1.0 1 0 0 1 1 1 1 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) Hydrolase_3 PF08282.12 gi|14521433|ref|NP_126909.1| - 1.1e-15 58.1 0.0 6.1e-14 52.4 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|14521433|ref|NP_126909.1| - 0.00032 21.2 0.0 0.12 12.7 0.0 2.9 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521433|ref|NP_126909.1| - 0.0042 17.4 0.0 2.8 8.2 0.0 2.9 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|14521433|ref|NP_126909.1| - 0.0059 16.2 0.0 1.3 8.5 0.0 2.5 2 1 1 3 3 3 2 Sucrose-6F-phosphate phosphohydrolase Pyr_redox PF00070.27 gi|14521433|ref|NP_126909.1| - 0.016 15.7 0.1 1.4 9.6 0.0 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase MannoseP_isomer PF01050.18 gi|14521434|ref|NP_126910.1| - 2.6e-66 222.2 0.6 4.8e-66 221.3 0.6 1.4 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.23 gi|14521434|ref|NP_126910.1| - 1.2e-60 205.2 0.1 1.9e-60 204.5 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase Cupin_2 PF07883.11 gi|14521434|ref|NP_126910.1| - 7.6e-14 51.2 0.6 2e-13 49.9 0.2 1.9 2 0 0 2 2 2 1 Cupin domain NTP_transf_3 PF12804.7 gi|14521434|ref|NP_126910.1| - 1.7e-07 31.8 0.0 4.8e-07 30.3 0.0 1.7 2 0 0 2 2 2 1 MobA-like NTP transferase domain AraC_binding PF02311.19 gi|14521434|ref|NP_126910.1| - 6.5e-05 22.9 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|14521434|ref|NP_126910.1| - 0.00028 20.5 0.0 0.00075 19.1 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_6 PF12852.7 gi|14521434|ref|NP_126910.1| - 0.0019 18.0 0.1 0.012 15.3 0.1 2.0 1 1 0 2 2 2 1 Cupin Cupin_1 PF00190.22 gi|14521434|ref|NP_126910.1| - 0.014 15.0 0.1 0.038 13.6 0.0 1.7 2 0 0 2 2 2 0 Cupin CENP-C_C PF11699.8 gi|14521434|ref|NP_126910.1| - 0.098 12.9 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Mif2/CENP-C like PGM_PMM_I PF02878.16 gi|14521435|ref|NP_126911.1| - 1.8e-47 160.5 0.0 3.1e-47 159.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|14521435|ref|NP_126911.1| - 4e-32 110.9 0.0 9.7e-32 109.7 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|14521435|ref|NP_126911.1| - 1.2e-27 96.4 0.0 2e-27 95.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|14521435|ref|NP_126911.1| - 7.5e-13 48.5 0.1 3.2e-12 46.4 0.1 2.1 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain AAA_14 PF13173.6 gi|14521436|ref|NP_126912.1| - 3.1e-22 79.0 0.0 4.8e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain HTH_29 PF13551.6 gi|14521436|ref|NP_126912.1| - 0.0096 15.9 0.0 0.03 14.4 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn helix ATPase_2 PF01637.18 gi|14521436|ref|NP_126912.1| - 0.01 15.8 0.1 0.092 12.6 0.0 2.1 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea HTH_23 PF13384.6 gi|14521436|ref|NP_126912.1| - 0.014 15.1 0.1 0.054 13.3 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 gi|14521436|ref|NP_126912.1| - 0.031 13.7 0.0 0.068 12.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_AsnC-type PF13404.6 gi|14521436|ref|NP_126912.1| - 0.04 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|14521436|ref|NP_126912.1| - 0.04 13.5 0.0 0.11 12.1 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding AAA PF00004.29 gi|14521436|ref|NP_126912.1| - 0.093 13.2 0.0 0.33 11.4 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|14521436|ref|NP_126912.1| - 0.12 12.8 0.0 0.86 10.0 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_12 PF13087.6 gi|14521437|ref|NP_126913.1| - 8.1e-59 198.6 0.0 1.3e-58 198.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 gi|14521437|ref|NP_126913.1| - 1e-55 189.3 0.1 2.2e-55 188.3 0.1 1.6 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|14521437|ref|NP_126913.1| - 3e-13 49.9 0.1 2.6e-08 33.8 0.0 3.2 2 1 0 3 3 3 2 AAA domain Viral_helicase1 PF01443.18 gi|14521437|ref|NP_126913.1| - 9.4e-09 35.4 0.0 0.041 13.6 0.0 3.2 3 0 0 3 3 3 3 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|14521437|ref|NP_126913.1| - 1.6e-08 35.0 0.0 1.5e-07 31.8 0.0 2.6 3 1 0 3 3 2 1 AAA domain PIF1 PF05970.14 gi|14521437|ref|NP_126913.1| - 1.5e-05 24.4 0.0 0.0003 20.1 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase UvrD-helicase PF00580.21 gi|14521437|ref|NP_126913.1| - 0.0012 18.4 1.0 0.0057 16.2 0.1 2.2 1 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain T2SSE PF00437.20 gi|14521437|ref|NP_126913.1| - 0.0025 16.9 0.0 0.0049 16.0 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 gi|14521437|ref|NP_126913.1| - 0.0038 17.5 0.0 0.043 14.1 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|14521437|ref|NP_126913.1| - 0.0064 16.9 0.7 0.056 13.8 0.7 2.7 2 1 0 2 2 2 1 AAA ATPase domain ResIII PF04851.15 gi|14521437|ref|NP_126913.1| - 0.015 15.3 0.1 0.094 12.7 0.1 2.2 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit HEM4 PF02602.15 gi|14521437|ref|NP_126913.1| - 0.022 14.1 0.0 0.044 13.1 0.0 1.5 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD cobW PF02492.19 gi|14521437|ref|NP_126913.1| - 0.032 13.8 0.0 1.7 8.2 0.0 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Flavi_DEAD PF07652.14 gi|14521437|ref|NP_126913.1| - 0.037 14.0 0.2 0.8 9.7 0.0 2.3 2 0 0 2 2 2 0 Flavivirus DEAD domain Helicase_RecD PF05127.14 gi|14521437|ref|NP_126913.1| - 0.043 13.7 0.2 2.1 8.2 0.0 2.4 2 0 0 2 2 2 0 Helicase PhoH PF02562.16 gi|14521437|ref|NP_126913.1| - 0.063 12.7 0.0 1.4 8.4 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein MogR_DNAbind PF12181.8 gi|14521438|ref|NP_126914.1| - 0.5 10.3 4.4 1.9 8.4 0.3 2.3 2 0 0 2 2 2 0 DNA binding domain of the motility gene repressor (MogR) Sua5_yciO_yrdC PF01300.18 gi|14521439|ref|NP_126915.1| - 4.2e-47 159.9 0.0 6.8e-47 159.3 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|14521439|ref|NP_126915.1| - 1.7e-32 110.9 14.8 1.7e-16 59.7 3.0 2.4 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|14521439|ref|NP_126915.1| - 1.1e-29 103.1 0.2 2.1e-29 102.2 0.2 1.4 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|14521439|ref|NP_126915.1| - 6e-24 84.3 0.2 2.3e-23 82.4 0.1 2.1 2 0 0 2 2 2 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|14521439|ref|NP_126915.1| - 4e-09 36.6 0.1 1.2e-07 31.8 0.0 2.2 2 0 0 2 2 2 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|14521439|ref|NP_126915.1| - 0.00015 21.5 0.1 0.046 13.4 0.0 2.4 2 0 0 2 2 2 2 Carbamoyltransferase N-terminus Lar_restr_allev PF14354.6 gi|14521439|ref|NP_126915.1| - 0.031 14.6 1.2 1.4 9.4 0.2 2.5 2 0 0 2 2 2 0 Restriction alleviation protein Lar DUF4765 PF15962.5 gi|14521439|ref|NP_126915.1| - 0.046 11.7 0.2 0.064 11.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4765) Zn-ribbon_8 PF09723.10 gi|14521439|ref|NP_126915.1| - 0.067 13.3 6.6 0.45 10.7 1.2 3.0 3 0 0 3 3 3 0 Zinc ribbon domain DZR PF12773.7 gi|14521439|ref|NP_126915.1| - 0.12 12.4 2.1 8.1 6.6 0.1 2.4 2 0 0 2 2 2 0 Double zinc ribbon NMD3 PF04981.13 gi|14521439|ref|NP_126915.1| - 0.51 9.8 3.1 0.75 9.2 0.3 2.2 1 1 0 2 2 2 0 NMD3 family zinc_ribbon_15 PF17032.5 gi|14521439|ref|NP_126915.1| - 0.66 10.8 2.9 1.1 10.0 0.7 2.4 1 1 1 2 2 2 0 zinc-ribbon family HypD PF01924.16 gi|14521440|ref|NP_126916.1| - 6.5e-136 453.0 0.0 7.5e-136 452.8 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HupF_HypC PF01455.18 gi|14521441|ref|NP_126917.1| - 2.4e-30 104.5 0.1 2.7e-30 104.3 0.1 1.0 1 0 0 1 1 1 1 HupF/HypC family RuvA_N PF01330.21 gi|14521441|ref|NP_126917.1| - 0.056 13.5 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 RuvA N terminal domain Penicillinase_R PF03965.16 gi|14521442|ref|NP_126918.1| - 0.00095 19.5 0.0 0.0015 18.9 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor HrcA_DNA-bdg PF03444.15 gi|14521442|ref|NP_126918.1| - 0.0032 17.1 0.1 0.0071 16.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_5 PF01022.20 gi|14521442|ref|NP_126918.1| - 0.0082 16.0 0.1 0.033 14.1 0.1 1.9 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|14521442|ref|NP_126918.1| - 0.084 12.9 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|14521442|ref|NP_126918.1| - 0.096 13.0 0.6 0.51 10.7 0.2 2.2 2 1 0 2 2 2 0 Transcriptional regulator GCIP PF13324.6 gi|14521443|ref|NP_126919.1| - 0.013 15.2 3.1 0.021 14.4 2.4 1.8 1 1 0 1 1 1 0 Grap2 and cyclin-D-interacting DUF445 PF04286.12 gi|14521443|ref|NP_126919.1| - 0.016 15.0 1.9 0.019 14.8 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF3818 PF12825.7 gi|14521443|ref|NP_126919.1| - 0.027 13.5 1.8 0.034 13.2 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) TipAS PF07739.13 gi|14521443|ref|NP_126919.1| - 0.027 15.0 2.1 0.32 11.5 0.1 2.2 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain YkyA PF10368.9 gi|14521443|ref|NP_126919.1| - 0.031 13.9 9.6 0.19 11.3 0.2 2.2 1 1 0 2 2 2 0 Putative cell-wall binding lipoprotein Nop16 PF09420.10 gi|14521443|ref|NP_126919.1| - 0.033 14.2 1.7 0.055 13.5 1.7 1.4 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 CorA PF01544.18 gi|14521443|ref|NP_126919.1| - 0.035 13.4 0.9 0.043 13.1 0.9 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein dCache_2 PF08269.11 gi|14521443|ref|NP_126919.1| - 0.035 13.3 1.6 0.051 12.8 1.6 1.2 1 0 0 1 1 1 0 Cache domain DASH_Duo1 PF08651.10 gi|14521443|ref|NP_126919.1| - 0.037 13.8 0.4 0.58 10.0 0.1 2.6 3 0 0 3 3 3 0 DASH complex subunit Duo1 FRB_dom PF08771.11 gi|14521443|ref|NP_126919.1| - 0.065 13.7 0.7 1.8 9.0 0.1 2.4 1 1 2 3 3 3 0 FKBP12-rapamycin binding domain Laminin_II PF06009.12 gi|14521443|ref|NP_126919.1| - 0.091 12.8 6.1 0.25 11.3 3.5 2.1 2 0 0 2 2 2 0 Laminin Domain II Peptidase_C65 PF10275.9 gi|14521443|ref|NP_126919.1| - 0.12 11.8 2.7 0.28 10.6 0.1 2.1 1 1 0 2 2 2 0 Peptidase C65 Otubain NOG1_N PF17835.1 gi|14521443|ref|NP_126919.1| - 0.13 12.2 3.5 2.4 8.1 0.0 2.1 1 1 1 2 2 2 0 NOG1 N-terminal helical domain DUF4363 PF14276.6 gi|14521443|ref|NP_126919.1| - 0.16 12.1 3.5 0.4 10.8 1.5 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4363) KIP1 PF07765.12 gi|14521443|ref|NP_126919.1| - 0.17 12.1 2.6 0.35 11.0 1.9 2.0 1 1 0 1 1 1 0 KIP1-like protein RPN6_N PF18055.1 gi|14521443|ref|NP_126919.1| - 0.18 12.2 3.7 0.23 11.8 1.3 2.1 1 1 0 2 2 2 0 26S proteasome regulatory subunit RPN6 N-terminal domain Spectrin PF00435.21 gi|14521443|ref|NP_126919.1| - 0.41 11.2 6.3 2.6 8.6 2.0 2.8 1 1 1 2 2 2 0 Spectrin repeat IL2 PF00715.17 gi|14521443|ref|NP_126919.1| - 0.43 10.5 2.7 5.6 6.9 2.7 2.2 1 1 0 1 1 1 0 Interleukin 2 EDS1_EP PF18117.1 gi|14521443|ref|NP_126919.1| - 0.66 10.5 3.7 12 6.4 1.0 2.4 2 1 0 2 2 2 0 Enhanced disease susceptibility 1 protein EP domain DUF5327 PF17261.2 gi|14521443|ref|NP_126919.1| - 0.71 10.6 5.5 1.3 9.8 5.5 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5327) DUF257 PF03192.13 gi|14521444|ref|NP_126920.1| - 5.6e-39 134.1 2.6 6.3e-39 133.9 2.6 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 Flavin_Reduct PF01613.18 gi|14521445|ref|NP_126921.1| - 2.4e-24 86.1 0.0 3e-24 85.8 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain P2 PF07194.11 gi|14521446|ref|NP_126922.1| - 0.026 14.6 1.5 0.055 13.5 0.4 2.0 2 0 0 2 2 2 0 P2 response regulator binding domain FeS_assembly_P PF01883.19 gi|33356775|ref|NP_877685.1| - 5.4e-07 29.7 0.2 7.4e-07 29.2 0.2 1.4 1 1 0 1 1 1 1 Iron-sulfur cluster assembly protein ArsA_ATPase PF02374.15 gi|14521447|ref|NP_126923.1| - 1.7e-75 254.1 0.3 2.2e-75 253.7 0.3 1.1 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 gi|14521447|ref|NP_126923.1| - 1.1e-14 54.8 0.0 2.5e-14 53.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|14521447|ref|NP_126923.1| - 3.7e-12 46.4 0.0 1.1e-11 44.8 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 gi|14521447|ref|NP_126923.1| - 2.1e-06 27.4 0.1 4.6e-06 26.3 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|14521447|ref|NP_126923.1| - 7.6e-06 25.6 3.5 9.6e-05 21.9 0.1 2.9 3 0 0 3 3 3 1 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 gi|14521447|ref|NP_126923.1| - 0.00041 20.0 0.3 0.00088 18.9 0.1 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 gi|14521447|ref|NP_126923.1| - 0.00052 19.9 0.8 0.0037 17.1 0.2 2.4 2 1 1 3 3 3 1 Conserved hypothetical ATP binding protein MipZ PF09140.11 gi|14521447|ref|NP_126923.1| - 0.0011 18.3 0.3 0.014 14.7 0.2 2.2 1 1 0 2 2 2 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|14521447|ref|NP_126923.1| - 0.008 15.7 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 gi|14521447|ref|NP_126923.1| - 0.015 14.3 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 gi|14521447|ref|NP_126923.1| - 0.018 14.8 0.2 0.041 13.6 0.2 1.8 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|14521447|ref|NP_126923.1| - 0.03 13.5 0.3 0.06 12.5 0.3 1.7 1 1 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|14521447|ref|NP_126923.1| - 0.049 13.5 0.0 0.15 11.9 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 gi|14521447|ref|NP_126923.1| - 0.055 13.2 0.0 0.099 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Glyco_trans_4_4 PF13579.6 gi|14521447|ref|NP_126923.1| - 0.076 13.5 0.0 0.18 12.2 0.0 1.8 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain AAA_5 PF07728.14 gi|14521447|ref|NP_126923.1| - 0.096 12.7 0.1 4.4 7.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 gi|14521447|ref|NP_126923.1| - 0.12 11.8 0.7 0.4 10.1 0.3 2.1 2 1 0 2 2 2 0 PhoH-like protein AAA_25 PF13481.6 gi|14521447|ref|NP_126923.1| - 0.13 11.9 0.2 0.27 10.8 0.2 1.7 1 1 0 1 1 1 0 AAA domain TPD52 PF04201.15 gi|14521447|ref|NP_126923.1| - 0.37 10.4 2.0 2.1 8.0 0.2 2.3 2 0 0 2 2 2 0 Tumour protein D52 family CstA PF02554.14 gi|14521448|ref|NP_126924.1| - 1.9e-109 366.1 28.8 1.9e-109 366.1 28.8 2.0 2 0 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 gi|14521448|ref|NP_126924.1| - 1.8e-31 108.9 10.6 1.8e-31 108.9 10.6 3.0 3 0 0 3 3 3 1 5TM C-terminal transporter carbon starvation CstA ABC_tran PF00005.27 gi|14521449|ref|NP_126925.1| - 2.1e-44 151.4 0.0 1.7e-22 80.4 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|14521449|ref|NP_126925.1| - 9.6e-17 61.7 7.9 0.00024 21.0 0.1 4.4 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14521449|ref|NP_126925.1| - 1e-14 54.5 1.2 6.3e-05 22.5 0.0 4.1 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|14521449|ref|NP_126925.1| - 4.8e-12 45.5 2.0 9.8e-12 44.5 2.0 1.6 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4_6 PF12837.7 gi|14521449|ref|NP_126925.1| - 2.2e-09 37.0 12.5 0.00016 21.6 3.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain AAA PF00004.29 gi|14521449|ref|NP_126925.1| - 4.1e-07 30.5 0.2 0.0084 16.5 0.0 3.3 3 1 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) Fer4 PF00037.27 gi|14521449|ref|NP_126925.1| - 8.2e-07 28.6 3.2 8.2e-07 28.6 3.2 3.5 3 1 0 3 3 3 1 4Fe-4S binding domain AAA_15 PF13175.6 gi|14521449|ref|NP_126925.1| - 2.9e-06 27.2 2.4 0.19 11.4 0.0 3.8 2 2 1 4 4 4 2 AAA ATPase domain Rad17 PF03215.15 gi|14521449|ref|NP_126925.1| - 3.1e-06 27.2 0.0 0.022 14.7 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_24 PF13479.6 gi|14521449|ref|NP_126925.1| - 4.2e-06 26.6 0.3 0.028 14.1 0.1 2.8 3 0 0 3 3 3 2 AAA domain AAA_16 PF13191.6 gi|14521449|ref|NP_126925.1| - 1e-05 26.0 0.1 0.15 12.4 0.0 2.8 2 1 0 2 2 2 2 AAA ATPase domain Fer4_21 PF14697.6 gi|14521449|ref|NP_126925.1| - 1.1e-05 25.5 10.5 3.4e-05 23.9 10.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain AAA_33 PF13671.6 gi|14521449|ref|NP_126925.1| - 2.3e-05 24.6 0.2 0.2 11.8 0.0 2.9 2 1 0 2 2 2 2 AAA domain Fer4_10 PF13237.6 gi|14521449|ref|NP_126925.1| - 2.3e-05 24.4 10.4 0.00071 19.6 10.9 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14521449|ref|NP_126925.1| - 2.9e-05 24.6 10.3 0.0013 19.2 11.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14521449|ref|NP_126925.1| - 3.7e-05 23.8 7.0 9.7e-05 22.5 7.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521449|ref|NP_126925.1| - 0.00012 21.9 11.3 0.0026 17.7 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_18 PF13238.6 gi|14521449|ref|NP_126925.1| - 0.00013 22.5 0.3 0.1 13.1 0.0 3.3 3 1 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|14521449|ref|NP_126925.1| - 0.00015 22.0 1.9 0.45 10.8 0.1 3.0 2 2 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|14521449|ref|NP_126925.1| - 0.00016 22.0 0.0 0.41 11.1 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_14 PF13173.6 gi|14521449|ref|NP_126925.1| - 0.00022 21.3 1.0 1.6 8.8 0.0 3.7 3 1 1 4 4 3 2 AAA domain dNK PF01712.19 gi|14521449|ref|NP_126925.1| - 0.00028 20.8 0.1 0.083 12.7 0.0 2.5 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_23 PF13476.6 gi|14521449|ref|NP_126925.1| - 0.00034 21.2 8.5 0.1 13.0 0.1 3.0 2 1 1 3 3 3 2 AAA domain AAA_28 PF13521.6 gi|14521449|ref|NP_126925.1| - 0.00036 20.8 0.0 0.65 10.2 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|14521449|ref|NP_126925.1| - 0.00093 18.9 0.2 1.6 8.5 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain SRP54 PF00448.22 gi|14521449|ref|NP_126925.1| - 0.0011 18.6 3.1 0.69 9.5 0.1 2.5 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain NACHT PF05729.12 gi|14521449|ref|NP_126925.1| - 0.0025 17.8 1.6 0.6 10.0 0.1 2.8 3 0 0 3 3 2 1 NACHT domain NB-ARC PF00931.22 gi|14521449|ref|NP_126925.1| - 0.0037 16.5 0.1 2 7.5 0.1 2.5 2 0 0 2 2 2 1 NB-ARC domain AAA_30 PF13604.6 gi|14521449|ref|NP_126925.1| - 0.0039 16.9 4.9 0.19 11.4 0.2 2.9 3 1 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 gi|14521449|ref|NP_126925.1| - 0.005 16.8 0.4 0.81 9.6 0.0 2.7 2 1 0 2 2 2 1 RsgA GTPase MobB PF03205.14 gi|14521449|ref|NP_126925.1| - 0.0076 16.1 0.8 5.8 6.8 0.1 2.9 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_7 PF12775.7 gi|14521449|ref|NP_126925.1| - 0.014 14.9 0.2 1.6 8.2 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 gi|14521449|ref|NP_126925.1| - 0.014 14.9 0.2 2.5 7.6 0.0 2.7 3 0 0 3 3 2 0 AAA domain Fer4_16 PF13484.6 gi|14521449|ref|NP_126925.1| - 0.015 16.3 10.0 0.056 14.4 3.0 2.4 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain MMR_HSR1 PF01926.23 gi|14521449|ref|NP_126925.1| - 0.018 15.1 0.2 2.4 8.2 0.0 2.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_5 PF07728.14 gi|14521449|ref|NP_126925.1| - 0.018 15.0 0.3 8.8 6.3 0.0 3.0 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) VirE PF05272.11 gi|14521449|ref|NP_126925.1| - 0.019 14.7 0.0 4 7.1 0.0 2.3 2 0 0 2 2 2 0 Virulence-associated protein E TsaE PF02367.17 gi|14521449|ref|NP_126925.1| - 0.02 14.9 2.3 2.2 8.3 0.1 3.0 3 1 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|14521449|ref|NP_126925.1| - 0.023 14.1 0.2 8.9 5.7 0.1 2.6 2 0 0 2 2 2 0 PhoH-like protein IstB_IS21 PF01695.17 gi|14521449|ref|NP_126925.1| - 0.035 13.8 0.0 4.5 7.0 0.0 3.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.6 gi|14521449|ref|NP_126925.1| - 0.057 13.8 1.9 10 6.4 0.0 3.1 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 gi|14521449|ref|NP_126925.1| - 0.068 13.1 10.2 3.5 7.5 0.3 4.2 4 0 0 4 4 4 0 NTPase cobW PF02492.19 gi|14521449|ref|NP_126925.1| - 0.069 12.7 0.2 13 5.3 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RNase_Zc3h12a PF11977.8 gi|14521449|ref|NP_126925.1| - 0.073 12.8 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 1 0 Zc3h12a-like Ribonuclease NYN domain RuvB_N PF05496.12 gi|14521449|ref|NP_126925.1| - 0.076 12.8 0.2 21 4.9 0.0 2.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 gi|14521449|ref|NP_126925.1| - 0.084 12.8 0.1 12 5.7 0.0 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_13 PF13166.6 gi|14521449|ref|NP_126925.1| - 0.096 11.3 0.1 7.8 5.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain Septin PF00735.18 gi|14521449|ref|NP_126925.1| - 0.12 11.6 0.0 3.2 7.0 0.0 2.2 2 0 0 2 2 2 0 Septin Spore_IV_A PF09547.10 gi|14521449|ref|NP_126925.1| - 0.12 11.3 2.6 7.5 5.4 0.0 2.8 3 0 0 3 3 3 0 Stage IV sporulation protein A (spore_IV_A) ATP_bind_1 PF03029.17 gi|14521449|ref|NP_126925.1| - 0.14 12.0 1.3 6 6.6 0.1 2.7 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein TrwB_AAD_bind PF10412.9 gi|14521449|ref|NP_126925.1| - 0.15 10.9 0.0 5.2 5.9 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 gi|14521449|ref|NP_126925.1| - 0.22 11.1 0.1 22 4.6 0.1 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain ATPase PF06745.13 gi|14521449|ref|NP_126925.1| - 0.25 10.7 1.6 5 6.4 0.0 2.5 2 0 0 2 2 2 0 KaiC Fer4_3 PF12798.7 gi|14521449|ref|NP_126925.1| - 0.25 12.4 17.5 1 10.4 5.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DLIC PF05783.11 gi|14521449|ref|NP_126925.1| - 0.3 9.9 0.6 0.93 8.2 0.1 1.9 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) MeaB PF03308.16 gi|14521449|ref|NP_126925.1| - 0.38 9.7 2.2 15 4.5 0.1 2.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Fer4_4 PF12800.7 gi|14521449|ref|NP_126925.1| - 0.44 11.2 13.8 0.77 10.4 3.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14521449|ref|NP_126925.1| - 1.3 9.7 10.1 0.45 11.1 2.7 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521449|ref|NP_126925.1| - 5.6 7.5 11.7 1.8 9.1 3.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF87 PF01935.17 gi|14521449|ref|NP_126925.1| - 7.1 6.6 5.7 14 5.7 0.1 3.2 3 1 0 3 3 3 0 Helicase HerA, central domain Ribonuc_L-PSP PF01042.21 gi|14521450|ref|NP_126926.1| - 5.6e-49 165.2 0.1 6.3e-49 165.0 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YtxH PF12732.7 gi|14521450|ref|NP_126926.1| - 0.025 15.1 0.1 0.04 14.5 0.1 1.4 1 1 0 1 1 1 0 YtxH-like protein LPG_synthase_TM PF03706.13 gi|14521451|ref|NP_126927.1| - 5.3e-38 131.3 15.4 7.2e-38 130.8 15.4 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Glycos_transf_1 PF00534.20 gi|14521452|ref|NP_126928.1| - 8.8e-46 155.6 0.0 1.2e-45 155.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14521452|ref|NP_126928.1| - 2.4e-36 125.1 0.1 3.8e-36 124.5 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|14521452|ref|NP_126928.1| - 2.6e-19 69.8 0.0 4.1e-19 69.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|14521452|ref|NP_126928.1| - 2.5e-09 37.4 0.0 4.5e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|14521452|ref|NP_126928.1| - 8.9e-07 29.5 0.0 1.6e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|14521452|ref|NP_126928.1| - 0.00017 21.4 0.1 0.0014 18.4 0.1 2.0 1 1 1 2 2 2 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.6 gi|14521452|ref|NP_126928.1| - 0.00018 21.6 0.1 0.00028 20.9 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_5 PF16994.5 gi|14521452|ref|NP_126928.1| - 0.0019 17.9 0.1 0.0058 16.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl-transferase family 4 PIGA PF08288.12 gi|14521452|ref|NP_126928.1| - 0.082 13.5 0.1 0.37 11.4 0.0 2.0 2 0 0 2 2 2 0 PIGA (GPI anchor biosynthesis) Glyco_transf_20 PF00982.21 gi|14521452|ref|NP_126928.1| - 0.15 10.7 0.0 0.27 9.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 20 Polysacc_deac_1 PF01522.21 gi|14521453|ref|NP_126929.1| - 7.7e-18 64.6 0.0 1.2e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF1638 PF07796.11 gi|14521453|ref|NP_126929.1| - 0.04 14.0 0.0 0.06 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) Lyase_1 PF00206.20 gi|14521454|ref|NP_126930.1| - 5.1e-60 203.5 0.2 7.7e-60 202.9 0.2 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|14521454|ref|NP_126930.1| - 2.6e-20 72.7 0.9 1.6e-19 70.2 0.2 2.5 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|14521454|ref|NP_126930.1| - 1.1e-07 31.9 0.1 3.5e-07 30.3 0.1 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Poty_PP PF08440.10 gi|14521454|ref|NP_126930.1| - 0.0069 15.5 0.1 0.012 14.7 0.1 1.4 1 0 0 1 1 1 1 Potyviridae polyprotein APG6_N PF17675.1 gi|14521454|ref|NP_126930.1| - 0.87 10.1 4.0 46 4.5 2.0 2.7 2 0 0 2 2 2 0 Apg6 coiled-coil region Methyltr_RsmB-F PF01189.17 gi|14521455|ref|NP_126931.1| - 8.5e-65 218.1 0.0 1.3e-64 217.5 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 gi|14521455|ref|NP_126931.1| - 6.1e-09 36.2 0.0 1.2e-08 35.3 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmF_N PF17125.5 gi|14521455|ref|NP_126931.1| - 3.4e-08 33.9 0.0 7.5e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|14521455|ref|NP_126931.1| - 2.6e-06 27.3 0.0 4.8e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|14521455|ref|NP_126931.1| - 0.00058 19.0 0.0 0.0011 18.2 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|14521455|ref|NP_126931.1| - 0.0025 18.5 0.1 0.042 14.6 0.0 2.6 3 0 0 3 3 3 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521455|ref|NP_126931.1| - 0.0027 17.1 0.0 0.011 15.1 0.0 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family DUF2431 PF10354.9 gi|14521455|ref|NP_126931.1| - 0.031 14.6 0.0 0.15 12.4 0.0 2.0 2 1 1 3 3 3 0 Domain of unknown function (DUF2431) Methyltransf_11 PF08241.12 gi|14521455|ref|NP_126931.1| - 0.097 13.3 0.1 10 6.8 0.0 2.6 3 0 0 3 3 3 0 Methyltransferase domain Methyltransf_33 PF10017.9 gi|14521455|ref|NP_126931.1| - 0.11 11.7 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent PCMT PF01135.19 gi|14521455|ref|NP_126931.1| - 0.14 11.9 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF3801 PF12687.7 gi|14521455|ref|NP_126931.1| - 0.16 12.1 0.1 0.31 11.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3801) GCD14 PF08704.10 gi|14521455|ref|NP_126931.1| - 0.2 11.3 0.0 0.63 9.7 0.0 1.7 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit YtpI PF14007.6 gi|14521456|ref|NP_126932.1| - 0.0075 16.4 0.6 0.012 15.7 0.1 1.7 1 1 1 2 2 2 1 YtpI-like protein PmbA_TldD PF01523.16 gi|14521457|ref|NP_126933.1| - 1.5e-51 175.9 0.7 2.4e-51 175.2 0.7 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|14521458|ref|NP_126934.1| - 1.6e-57 195.5 0.0 2.6e-57 194.8 0.0 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase DHDPS PF00701.22 gi|14521459|ref|NP_126935.1| - 7.6e-60 202.1 0.0 8.4e-60 201.9 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family DUF86 PF01934.17 gi|14521460|ref|NP_126936.1| - 9.4e-31 106.1 2.6 1.2e-30 105.9 2.6 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Vac_Fusion PF02346.16 gi|14521460|ref|NP_126936.1| - 0.013 15.1 0.5 0.036 13.7 0.1 1.9 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 Polbeta PF18765.1 gi|14521461|ref|NP_126937.1| - 3.6e-17 62.2 0.0 4.8e-17 61.8 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|14521461|ref|NP_126937.1| - 5.3e-06 26.7 0.1 6.8e-06 26.3 0.1 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain MarR_2 PF12802.7 gi|14521464|ref|NP_126940.1| - 1.4e-07 31.2 0.0 2.8e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|14521464|ref|NP_126940.1| - 2.4e-07 30.5 0.1 5e-07 29.5 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14521464|ref|NP_126940.1| - 4.4e-07 29.4 0.2 8.3e-07 28.5 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|14521464|ref|NP_126940.1| - 5.8e-06 26.0 0.0 1.4e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR PF01047.22 gi|14521464|ref|NP_126940.1| - 7.8e-05 22.5 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_micro PF17007.5 gi|14521464|ref|NP_126940.1| - 0.00018 20.5 0.3 0.00027 19.9 0.3 1.2 1 0 0 1 1 1 1 HTH-like HTH_Crp_2 PF13545.6 gi|14521464|ref|NP_126940.1| - 0.011 15.7 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain EF_assoc_2 PF08356.12 gi|14521464|ref|NP_126940.1| - 0.026 14.5 0.1 0.24 11.4 0.0 2.3 2 0 0 2 2 2 0 EF hand associated Rrf2 PF02082.20 gi|14521464|ref|NP_126940.1| - 0.03 14.7 0.0 0.06 13.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 gi|14521464|ref|NP_126940.1| - 0.041 14.4 0.1 0.17 12.4 0.0 1.9 1 1 1 2 2 2 0 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|14521464|ref|NP_126940.1| - 0.044 13.6 0.5 0.085 12.7 0.5 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit Ntox21 PF15526.6 gi|14521464|ref|NP_126940.1| - 0.062 13.6 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Novel toxin 21 DUF134 PF02001.16 gi|33356777|ref|NP_126941.2| - 2e-26 92.4 0.0 2.5e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4 PF04545.16 gi|33356777|ref|NP_126941.2| - 3.6e-07 29.6 0.1 3.6e-07 29.6 0.1 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|33356777|ref|NP_126941.2| - 5.6e-07 29.1 0.1 8.3e-07 28.6 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 gi|33356777|ref|NP_126941.2| - 6.2e-05 22.7 0.0 0.0001 22.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_31 PF13560.6 gi|33356777|ref|NP_126941.2| - 0.00023 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_ECF PF07638.11 gi|33356777|ref|NP_126941.2| - 0.00074 19.5 0.3 0.00095 19.1 0.3 1.1 1 0 0 1 1 1 1 ECF sigma factor HTH_psq PF05225.16 gi|33356777|ref|NP_126941.2| - 0.007 16.1 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 helix-turn-helix, Psq domain HTH_3 PF01381.22 gi|33356777|ref|NP_126941.2| - 0.011 15.8 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_1 PF00126.27 gi|33356777|ref|NP_126941.2| - 0.015 15.2 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_38 PF13936.6 gi|33356777|ref|NP_126941.2| - 0.03 14.1 0.0 0.055 13.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|33356777|ref|NP_126941.2| - 0.094 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_Crp_2 PF13545.6 gi|33356777|ref|NP_126941.2| - 0.098 12.6 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|33356777|ref|NP_126941.2| - 0.1 12.7 0.0 0.43 10.7 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix of insertion element transposase HTH_11 PF08279.12 gi|33356777|ref|NP_126941.2| - 0.13 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_24 PF13412.6 gi|33356777|ref|NP_126941.2| - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_29 PF13551.6 gi|33356777|ref|NP_126941.2| - 0.29 11.2 2.5 0.48 10.5 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn helix DUF296 PF03479.15 gi|14521466|ref|NP_126942.1| - 7e-24 84.3 0.0 8e-24 84.1 0.0 1.0 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain DUF4900 PF16241.5 gi|14521466|ref|NP_126942.1| - 0.085 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4900) Topoisom_bac PF01131.20 gi|14521467|ref|NP_126943.1| - 1e-89 301.4 2.3 3.6e-88 296.3 2.3 2.2 1 1 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|14521467|ref|NP_126943.1| - 2.4e-29 101.6 0.8 2e-28 98.6 0.0 3.0 3 0 0 3 3 3 1 Toprim domain DEAD PF00270.29 gi|14521467|ref|NP_126943.1| - 2.6e-13 50.1 0.2 1.7e-11 44.2 0.0 3.3 4 0 0 4 4 4 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|14521467|ref|NP_126943.1| - 1.6e-09 38.1 0.3 4.9e-05 23.6 0.0 4.1 4 0 0 4 4 4 1 Helicase conserved C-terminal domain zf_Rg PF17915.1 gi|14521467|ref|NP_126943.1| - 3.9e-09 35.7 0.9 3.9e-09 35.7 0.9 2.0 2 0 0 2 2 2 1 Reverse gyrase zinc finger ResIII PF04851.15 gi|14521467|ref|NP_126943.1| - 1.5e-07 31.6 0.1 1.5e-07 31.6 0.1 2.4 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit Zn-ribbon_8 PF09723.10 gi|14521467|ref|NP_126943.1| - 0.0019 18.3 1.0 0.0019 18.3 1.0 2.6 2 0 0 2 2 2 1 Zinc ribbon domain HypA PF01155.19 gi|14521467|ref|NP_126943.1| - 0.0027 17.7 3.5 0.026 14.5 0.3 2.9 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TackOD1 PF18551.1 gi|14521467|ref|NP_126943.1| - 0.0082 15.8 2.5 0.017 14.8 0.2 2.3 2 0 0 2 2 2 1 Thaumarchaeal output domain 1 DZR PF12773.7 gi|14521467|ref|NP_126943.1| - 0.068 13.2 5.3 0.23 11.5 0.4 2.3 2 0 0 2 2 2 0 Double zinc ribbon DUF4355 PF14265.6 gi|14521467|ref|NP_126943.1| - 0.08 13.2 12.3 0.086 13.1 4.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) DUF1272 PF06906.11 gi|14521467|ref|NP_126943.1| - 0.096 12.8 1.7 2.5 8.3 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) NOB1_Zn_bind PF08772.11 gi|14521467|ref|NP_126943.1| - 0.098 12.8 0.8 0.63 10.2 0.2 2.5 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Syntaxin_2 PF14523.6 gi|14521467|ref|NP_126943.1| - 0.12 12.7 1.9 11 6.4 0.4 3.2 3 0 0 3 3 2 0 Syntaxin-like protein SecA_DEAD PF07517.14 gi|14521467|ref|NP_126943.1| - 0.12 11.6 2.0 0.19 11.0 0.1 2.2 2 1 0 2 2 2 0 SecA DEAD-like domain SBP_bac_5 PF00496.22 gi|14521467|ref|NP_126943.1| - 0.12 11.3 0.0 0.31 10.0 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 5 Middle Glyco_tran_WecB PF03808.13 gi|14521467|ref|NP_126943.1| - 0.13 12.2 0.4 34 4.3 0.0 3.1 4 0 0 4 4 3 0 Glycosyl transferase WecB/TagA/CpsF family HEM4 PF02602.15 gi|14521467|ref|NP_126943.1| - 0.16 11.3 0.1 3.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Uroporphyrinogen-III synthase HemD FYDLN_acid PF09538.10 gi|14521467|ref|NP_126943.1| - 0.28 11.9 0.6 1.1 9.9 0.0 2.3 2 0 0 2 2 1 0 Protein of unknown function (FYDLN_acid) AAA_23 PF13476.6 gi|14521467|ref|NP_126943.1| - 0.6 10.6 20.0 0.53 10.8 12.1 3.5 2 1 0 2 2 2 0 AAA domain PqqD PF05402.12 gi|14521467|ref|NP_126943.1| - 0.6 10.4 3.3 41 4.6 0.4 3.5 3 0 0 3 3 2 0 Coenzyme PQQ synthesis protein D (PqqD) DUF35_N PF12172.8 gi|14521467|ref|NP_126943.1| - 0.69 9.8 10.2 1.4 8.9 5.1 2.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) MobC PF05713.11 gi|14521467|ref|NP_126943.1| - 0.71 10.4 3.4 0.71 10.4 0.4 2.7 2 0 0 2 2 2 0 Bacterial mobilisation protein (MobC) TF_Zn_Ribbon PF08271.12 gi|14521467|ref|NP_126943.1| - 0.92 9.1 8.7 6.6 6.3 0.1 3.5 3 0 0 3 3 3 0 TFIIB zinc-binding Rubredoxin_2 PF18073.1 gi|14521467|ref|NP_126943.1| - 1.7 8.5 12.0 0.99 9.2 5.8 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain Cas_DxTHG PF09455.10 gi|14521467|ref|NP_126943.1| - 1.7 8.1 9.7 0.18 11.4 0.9 3.1 3 0 0 3 3 3 0 CRISPR-associated (Cas) DxTHG family TrmB PF01978.19 gi|14521467|ref|NP_126943.1| - 2 8.3 6.6 4.1 7.4 0.3 4.0 3 1 1 4 4 3 0 Sugar-specific transcriptional regulator TrmB OrfB_Zn_ribbon PF07282.11 gi|14521467|ref|NP_126943.1| - 2.2 8.3 7.9 0.43 10.5 0.4 3.1 3 0 0 3 3 3 0 Putative transposase DNA-binding domain zinc-ribbons_6 PF07191.12 gi|14521467|ref|NP_126943.1| - 3.4 7.7 4.9 4.2 7.4 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbons DUF3375 PF11855.8 gi|14521467|ref|NP_126943.1| - 3.5 6.5 7.7 2.7 6.8 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3375) zf-ribbon_3 PF13248.6 gi|14521467|ref|NP_126943.1| - 6 6.4 9.4 24 4.5 0.2 2.7 2 1 0 2 2 2 0 zinc-ribbon domain DUF4404 PF14357.6 gi|14521467|ref|NP_126943.1| - 7.8 7.2 7.2 22 5.8 0.6 3.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) CCDC-167 PF15188.6 gi|14521467|ref|NP_126943.1| - 10 6.6 15.9 2.9 8.3 1.4 3.1 3 0 0 3 3 2 0 Coiled-coil domain-containing protein 167 TrmB PF01978.19 gi|14521468|ref|NP_126944.1| - 2.8e-20 71.9 0.0 5.4e-20 71.0 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|14521468|ref|NP_126944.1| - 7.9e-08 31.8 0.3 1.1e-07 31.3 0.3 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB PLDc_2 PF13091.6 gi|14521468|ref|NP_126944.1| - 5.2e-05 23.1 1.6 0.00034 20.5 1.6 2.1 1 1 0 1 1 1 1 PLD-like domain Auto_anti-p27 PF06677.12 gi|14521469|ref|NP_126945.1| - 2.4e-15 56.4 0.5 3.8e-15 55.8 0.5 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_ligase_ZBD PF03119.16 gi|14521469|ref|NP_126945.1| - 0.00043 20.2 1.9 0.016 15.2 0.2 2.3 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_2 PF13240.6 gi|14521469|ref|NP_126945.1| - 0.0018 17.9 4.0 0.005 16.5 4.0 1.7 1 1 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|14521469|ref|NP_126945.1| - 0.002 18.1 1.0 0.003 17.6 1.0 1.2 1 0 0 1 1 1 1 Double zinc ribbon Prok-RING_1 PF14446.6 gi|14521469|ref|NP_126945.1| - 0.0025 17.7 1.1 0.0035 17.2 1.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|14521469|ref|NP_126945.1| - 0.0027 17.1 3.9 0.0069 15.8 3.9 1.7 1 1 0 1 1 1 1 zinc-ribbon domain zf-LITAF-like PF10601.9 gi|14521469|ref|NP_126945.1| - 0.016 15.5 1.2 0.33 11.2 0.0 2.2 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|14521469|ref|NP_126945.1| - 0.02 14.6 4.2 0.15 11.9 4.2 2.1 1 1 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger TF_Zn_Ribbon PF08271.12 gi|14521469|ref|NP_126945.1| - 0.02 14.4 1.6 0.035 13.6 1.6 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding GFA PF04828.14 gi|14521469|ref|NP_126945.1| - 0.034 14.5 0.5 1.2 9.5 0.0 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc-ribbons_6 PF07191.12 gi|14521469|ref|NP_126945.1| - 0.037 14.0 0.8 0.055 13.5 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbons DUF2116 PF09889.9 gi|14521469|ref|NP_126945.1| - 0.068 13.2 0.9 0.11 12.6 0.9 1.3 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) RNA_POL_M_15KD PF02150.16 gi|14521469|ref|NP_126945.1| - 0.099 12.5 2.0 0.16 11.9 2.0 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Cys_rich_CPCC PF14206.6 gi|14521469|ref|NP_126945.1| - 0.11 12.3 0.2 0.17 11.7 0.2 1.3 1 0 0 1 1 1 0 Cysteine-rich CPCC A2L_zn_ribbon PF08792.10 gi|14521469|ref|NP_126945.1| - 0.13 12.0 1.2 0.24 11.2 1.2 1.5 1 1 0 1 1 1 0 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|14521469|ref|NP_126945.1| - 0.17 11.8 2.0 0.31 11.0 2.0 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.6 gi|14521469|ref|NP_126945.1| - 0.2 11.6 5.3 3.5 7.6 5.3 2.3 1 1 0 1 1 1 0 Nudix N-terminal zf-NADH-PPase PF09297.11 gi|14521469|ref|NP_126945.1| - 0.28 10.9 4.6 2.8 7.7 4.6 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|14521469|ref|NP_126945.1| - 0.29 11.2 4.7 7.1 6.7 0.4 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain HscB_4_cys PF18256.1 gi|14521469|ref|NP_126945.1| - 0.57 10.1 3.0 0.99 9.3 3.0 1.3 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif NOB1_Zn_bind PF08772.11 gi|14521469|ref|NP_126945.1| - 0.61 10.3 4.1 16 5.8 4.1 2.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.10 gi|14521469|ref|NP_126945.1| - 0.73 10.0 4.8 1 9.6 0.6 2.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-ISL3 PF14690.6 gi|14521469|ref|NP_126945.1| - 3.6 8.3 7.3 3.7e+02 1.9 5.8 2.9 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Arginase PF00491.21 gi|14521470|ref|NP_126946.1| - 1.4e-17 64.2 0.0 4.3e-17 62.5 0.0 1.6 1 1 0 1 1 1 1 Arginase family Met_10 PF02475.16 gi|14521471|ref|NP_126947.1| - 2.1e-71 239.8 0.2 2.5e-71 239.5 0.2 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|14521471|ref|NP_126947.1| - 5e-06 26.3 0.0 8.4e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|14521471|ref|NP_126947.1| - 8.8e-06 25.3 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DNA_methylase PF00145.17 gi|14521471|ref|NP_126947.1| - 0.0029 17.0 0.0 0.0041 16.5 0.0 1.2 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase RrnaAD PF00398.20 gi|14521471|ref|NP_126947.1| - 0.0041 16.2 0.0 0.0051 15.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_15 PF09445.10 gi|14521471|ref|NP_126947.1| - 0.018 14.6 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|14521471|ref|NP_126947.1| - 0.023 14.2 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain NTPase_1 PF03266.15 gi|14521472|ref|NP_126948.1| - 2.3e-55 187.0 0.0 2.7e-55 186.8 0.0 1.0 1 0 0 1 1 1 1 NTPase DUF2478 PF10649.9 gi|14521472|ref|NP_126948.1| - 1.7e-08 34.3 0.0 3.1e-08 33.4 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2478) AAA PF00004.29 gi|14521472|ref|NP_126948.1| - 2.6e-06 27.9 0.0 5.6e-06 26.8 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|14521472|ref|NP_126948.1| - 5.2e-05 23.0 0.0 0.021 14.6 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|14521472|ref|NP_126948.1| - 5.8e-05 23.5 0.1 0.00018 22.0 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|14521472|ref|NP_126948.1| - 0.00014 22.4 0.0 0.00029 21.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|14521472|ref|NP_126948.1| - 0.00017 21.3 0.1 0.03 14.0 0.1 2.2 2 0 0 2 2 2 1 Thymidylate kinase AAA_17 PF13207.6 gi|14521472|ref|NP_126948.1| - 0.00024 21.6 0.3 0.00041 20.8 0.1 1.5 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 gi|14521472|ref|NP_126948.1| - 0.00026 20.8 0.2 0.0011 18.7 0.2 1.8 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|14521472|ref|NP_126948.1| - 0.00027 20.0 0.1 0.00046 19.3 0.1 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 gi|14521472|ref|NP_126948.1| - 0.0005 20.0 0.0 0.00096 19.1 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA_5 PF07728.14 gi|14521472|ref|NP_126948.1| - 0.00059 19.9 0.6 0.068 13.2 0.0 2.8 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|14521472|ref|NP_126948.1| - 0.0008 19.7 0.1 0.043 14.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 gi|14521472|ref|NP_126948.1| - 0.00088 19.2 0.1 0.0029 17.5 0.0 1.8 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B IstB_IS21 PF01695.17 gi|14521472|ref|NP_126948.1| - 0.00099 18.9 0.0 0.2 11.4 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein NB-ARC PF00931.22 gi|14521472|ref|NP_126948.1| - 0.0012 18.1 0.0 0.0018 17.5 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain SRP54 PF00448.22 gi|14521472|ref|NP_126948.1| - 0.0037 16.9 0.0 0.037 13.6 0.0 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain APS_kinase PF01583.20 gi|14521472|ref|NP_126948.1| - 0.0094 15.9 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 gi|14521472|ref|NP_126948.1| - 0.0097 16.1 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|14521472|ref|NP_126948.1| - 0.0097 15.4 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase KTI12 PF08433.10 gi|14521472|ref|NP_126948.1| - 0.01 15.3 0.1 0.036 13.5 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Viral_helicase1 PF01443.18 gi|14521472|ref|NP_126948.1| - 0.01 15.6 0.1 0.054 13.2 0.0 1.9 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 gi|14521472|ref|NP_126948.1| - 0.011 16.1 0.0 2.3 8.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|14521472|ref|NP_126948.1| - 0.015 15.7 0.0 0.033 14.6 0.0 1.6 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 gi|14521472|ref|NP_126948.1| - 0.028 14.5 0.1 0.045 13.8 0.1 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase PIF1 PF05970.14 gi|14521472|ref|NP_126948.1| - 0.032 13.4 0.1 0.13 11.4 0.0 1.8 2 0 0 2 2 2 0 PIF1-like helicase cobW PF02492.19 gi|14521472|ref|NP_126948.1| - 0.036 13.6 0.1 0.071 12.7 0.0 1.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|14521472|ref|NP_126948.1| - 0.037 14.3 0.0 0.059 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|14521472|ref|NP_126948.1| - 0.048 13.7 0.0 0.13 12.4 0.0 1.7 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 gi|14521472|ref|NP_126948.1| - 0.052 13.3 0.1 0.11 12.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|14521472|ref|NP_126948.1| - 0.053 13.4 0.0 2 8.2 0.0 2.1 2 0 0 2 2 2 0 Bacterial dnaA protein Zeta_toxin PF06414.12 gi|14521472|ref|NP_126948.1| - 0.059 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin CbiA PF01656.23 gi|14521472|ref|NP_126948.1| - 0.099 12.7 0.0 0.32 11.1 0.0 1.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2075 PF09848.9 gi|14521472|ref|NP_126948.1| - 0.11 11.8 0.1 0.19 10.9 0.0 1.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATP_bind_1 PF03029.17 gi|14521472|ref|NP_126948.1| - 0.15 11.8 0.1 0.23 11.2 0.1 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 gi|14521472|ref|NP_126948.1| - 0.16 12.0 0.2 1.7 8.7 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 gi|14521472|ref|NP_126948.1| - 0.19 11.6 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|14521473|ref|NP_126949.1| - 9.5e-29 100.7 0.0 1.3e-28 100.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521473|ref|NP_126949.1| - 1.9e-12 47.6 2.0 4.8e-06 26.6 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14521473|ref|NP_126949.1| - 1.9e-09 37.3 1.5 0.00058 19.4 0.1 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|14521473|ref|NP_126949.1| - 2.5e-06 27.1 0.0 4.3e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|14521473|ref|NP_126949.1| - 2.8e-06 28.0 0.3 5.1e-06 27.1 0.3 1.7 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 gi|14521473|ref|NP_126949.1| - 8.1e-05 21.6 0.3 0.092 11.5 0.0 2.1 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_33 PF13671.6 gi|14521473|ref|NP_126949.1| - 0.00011 22.3 0.0 0.00023 21.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|14521473|ref|NP_126949.1| - 0.00033 20.5 0.0 0.00048 19.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 gi|14521473|ref|NP_126949.1| - 0.00045 20.6 0.1 0.00069 20.0 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521473|ref|NP_126949.1| - 0.00084 19.6 0.1 0.0025 18.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|14521473|ref|NP_126949.1| - 0.0039 17.1 0.1 0.52 10.2 0.0 2.3 2 0 0 2 2 2 1 NTPase AAA_27 PF13514.6 gi|14521473|ref|NP_126949.1| - 0.0042 16.7 0.0 0.0073 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|14521473|ref|NP_126949.1| - 0.0059 16.4 0.0 0.014 15.2 0.0 1.7 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|14521473|ref|NP_126949.1| - 0.014 15.2 0.0 0.034 13.9 0.0 1.7 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|14521473|ref|NP_126949.1| - 0.014 15.4 0.0 0.036 14.0 0.0 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain NACHT PF05729.12 gi|14521473|ref|NP_126949.1| - 0.02 14.8 0.0 0.035 14.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 gi|14521473|ref|NP_126949.1| - 0.025 14.9 0.0 0.044 14.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|14521473|ref|NP_126949.1| - 0.026 13.9 0.0 0.035 13.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.6 gi|14521473|ref|NP_126949.1| - 0.037 14.2 0.1 0.37 11.1 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_14 PF13173.6 gi|14521473|ref|NP_126949.1| - 0.048 13.7 0.0 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|14521473|ref|NP_126949.1| - 0.058 13.3 0.1 0.12 12.2 0.1 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 gi|14521473|ref|NP_126949.1| - 0.068 13.6 0.0 0.17 12.3 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|14521473|ref|NP_126949.1| - 0.085 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase FecCD PF01032.18 gi|14521474|ref|NP_126950.1| - 2.7e-88 296.0 33.7 3.3e-88 295.7 33.7 1.0 1 0 0 1 1 1 1 FecCD transport family DUF5368 PF17336.2 gi|14521474|ref|NP_126950.1| - 0.031 14.5 1.1 0.031 14.5 1.1 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5368) Helicase_RecD PF05127.14 gi|14521475|ref|NP_126951.1| - 9.9e-56 188.4 0.0 1.6e-55 187.7 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|14521475|ref|NP_126951.1| - 1.3e-46 158.8 0.0 2.5e-32 112.1 0.0 2.5 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|14521475|ref|NP_126951.1| - 1.1e-34 118.2 0.0 5.7e-34 115.9 0.0 2.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) tRNA_bind_2 PF13725.6 gi|14521475|ref|NP_126951.1| - 2.4e-05 24.1 1.7 4e-05 23.4 0.2 2.2 2 1 0 2 2 2 1 Possible tRNA binding domain AAA_30 PF13604.6 gi|14521475|ref|NP_126951.1| - 6.8e-05 22.7 0.0 0.00079 19.2 0.0 2.4 1 1 1 2 2 2 1 AAA domain Acetyltransf_1 PF00583.25 gi|14521475|ref|NP_126951.1| - 0.019 15.2 0.1 0.062 13.5 0.1 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) family DEAD PF00270.29 gi|14521475|ref|NP_126951.1| - 0.05 13.4 0.1 0.37 10.5 0.1 2.3 2 1 0 2 2 2 0 DEAD/DEAH box helicase HTH_11 PF08279.12 gi|14521476|ref|NP_126952.1| - 4.3e-08 33.0 0.0 8.1e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_29 PF13551.6 gi|14521476|ref|NP_126952.1| - 0.00073 19.5 0.1 0.0088 16.0 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_DeoR PF08220.12 gi|14521476|ref|NP_126952.1| - 0.0073 16.0 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|14521476|ref|NP_126952.1| - 0.011 15.8 0.0 0.042 14.0 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|14521476|ref|NP_126952.1| - 0.013 15.6 0.0 0.038 14.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_17 PF12728.7 gi|14521476|ref|NP_126952.1| - 0.013 15.7 0.0 0.042 14.0 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|14521476|ref|NP_126952.1| - 0.016 15.0 0.0 0.075 12.9 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_22 PF13309.6 gi|14521476|ref|NP_126952.1| - 0.017 15.2 0.0 0.054 13.6 0.0 1.9 1 1 0 1 1 1 0 HTH domain MRP-L20 PF12824.7 gi|14521476|ref|NP_126952.1| - 0.037 14.2 0.0 0.066 13.4 0.0 1.4 1 1 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 UPF0122 PF04297.14 gi|14521476|ref|NP_126952.1| - 0.051 13.8 0.1 0.098 12.9 0.1 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like PuR_N PF09182.10 gi|14521476|ref|NP_126952.1| - 0.057 13.3 0.0 0.099 12.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal HTH_24 PF13412.6 gi|14521476|ref|NP_126952.1| - 0.1 12.2 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Mga PF05043.13 gi|14521476|ref|NP_126952.1| - 0.12 13.0 0.1 0.27 11.9 0.0 1.6 2 0 0 2 2 1 0 Mga helix-turn-helix domain SpoIIID PF12116.8 gi|14521476|ref|NP_126952.1| - 0.13 12.4 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 Stage III sporulation protein D HU-CCDC81_euk_2 PF18289.1 gi|14521476|ref|NP_126952.1| - 0.13 12.4 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HTH_38 PF13936.6 gi|14521476|ref|NP_126952.1| - 0.15 11.8 0.0 0.71 9.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|14521476|ref|NP_126952.1| - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain PMT_2 PF13231.6 gi|14521477|ref|NP_126953.1| - 3.1e-10 40.5 16.7 3.1e-10 40.5 16.7 4.2 2 2 1 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase BetaGal_dom4_5 PF13364.6 gi|14521478|ref|NP_126954.1| - 0.17 12.5 0.0 0.34 11.5 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase jelly roll domain MazG PF03819.17 gi|14521479|ref|NP_126955.1| - 5.3e-14 52.2 0.1 6.7e-14 51.8 0.1 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 gi|14521479|ref|NP_126955.1| - 3.2e-05 24.1 1.4 4.5e-05 23.6 0.6 1.6 1 1 1 2 2 2 1 MazG-like family PRA-PH PF01503.17 gi|14521479|ref|NP_126955.1| - 9.6e-05 22.8 0.5 0.00011 22.6 0.5 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase HhH-GPD PF00730.25 gi|14521480|ref|NP_126956.1| - 2.7e-11 43.9 0.0 4.2e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HTH_3 PF01381.22 gi|14521481|ref|NP_126957.1| - 6.5e-10 38.9 0.0 1.2e-09 38.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|14521481|ref|NP_126957.1| - 0.00015 21.7 0.2 0.00031 20.7 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|14521481|ref|NP_126957.1| - 0.0014 19.0 0.0 0.0023 18.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|14521481|ref|NP_126957.1| - 0.029 13.9 0.0 0.056 13.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|14521481|ref|NP_126957.1| - 0.071 13.6 0.0 0.13 12.8 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain zf-C4_ClpX PF06689.13 gi|14521481|ref|NP_126957.1| - 0.075 12.9 0.8 0.13 12.2 0.8 1.4 1 0 0 1 1 1 0 ClpX C4-type zinc finger DUF4428 PF14471.6 gi|14521481|ref|NP_126957.1| - 0.1 12.6 0.2 0.26 11.2 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) ArsR PF09824.9 gi|14521481|ref|NP_126957.1| - 0.1 12.2 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator DZR PF12773.7 gi|14521481|ref|NP_126957.1| - 0.12 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Aminotran_3 PF00202.21 gi|14521482|ref|NP_126958.1| - 1.7e-105 353.0 0.0 2.1e-105 352.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Na_Ala_symp PF01235.17 gi|14521483|ref|NP_126959.1| - 6.4e-131 437.3 35.0 4.8e-96 322.4 19.3 2.1 2 0 0 2 2 2 2 Sodium:alanine symporter family Saf_2TM PF18303.1 gi|14521483|ref|NP_126959.1| - 5.1 6.7 22.0 0.11 12.1 1.4 4.7 3 2 2 6 6 6 0 SAVED-fused 2TM effector domain DUF4129 PF13559.6 gi|14521484|ref|NP_126960.1| - 2.1e-05 24.7 0.0 3.4e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4129) DUF2417 PF10329.9 gi|14521484|ref|NP_126960.1| - 0.00081 18.9 3.8 0.001 18.6 3.8 1.2 1 0 0 1 1 1 1 Region of unknown function (DUF2417) DUF2070 PF09843.9 gi|14521484|ref|NP_126960.1| - 0.18 10.1 11.7 0.24 9.7 11.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4083 PF13314.6 gi|14521484|ref|NP_126960.1| - 0.31 11.0 0.1 0.31 11.0 0.1 4.1 4 1 0 4 4 4 0 Domain of unknown function (DUF4083) DUF2615 PF11027.8 gi|14521484|ref|NP_126960.1| - 0.52 10.5 4.1 2.9 8.1 0.6 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2615) DPM3 PF08285.11 gi|14521484|ref|NP_126960.1| - 2.8 8.2 11.7 15 5.9 1.6 3.0 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Otopetrin PF03189.13 gi|14521484|ref|NP_126960.1| - 3.3 6.4 10.9 5.1 5.8 7.9 2.1 1 1 1 2 2 2 0 Otopetrin DUF4381 PF14316.6 gi|14521484|ref|NP_126960.1| - 7.1 6.9 7.1 0.62 10.3 0.2 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF4381) DUF2207 PF09972.9 gi|14521484|ref|NP_126960.1| - 8.6 5.0 13.2 5e+02 -0.8 13.2 2.1 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 gi|14521485|ref|NP_126961.1| - 2.2 8.3 5.7 3.8 7.6 5.7 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III AAA_3 PF07726.11 gi|14521486|ref|NP_126962.1| - 7.2e-69 229.7 0.2 1.4e-68 228.8 0.1 1.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|14521486|ref|NP_126962.1| - 1e-21 76.5 0.1 2.7e-21 75.2 0.1 1.8 1 1 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|14521486|ref|NP_126962.1| - 1.1e-12 48.2 0.0 2.6e-12 46.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|14521486|ref|NP_126962.1| - 3.9e-05 24.1 0.0 6.3e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|14521486|ref|NP_126962.1| - 7.6e-05 22.5 0.2 0.011 15.5 0.0 2.9 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|14521486|ref|NP_126962.1| - 0.0002 21.1 0.0 0.00059 19.6 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain MCM PF00493.23 gi|14521486|ref|NP_126962.1| - 0.003 16.7 0.0 0.0074 15.4 0.0 1.6 1 1 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 gi|14521486|ref|NP_126962.1| - 0.0079 16.6 0.1 0.041 14.3 0.0 2.1 1 1 1 2 2 2 1 MCM AAA-lid domain AAA_lid_8 PF17868.1 gi|14521486|ref|NP_126962.1| - 0.072 13.0 0.4 0.49 10.3 0.4 2.5 1 1 0 1 1 1 0 AAA lid domain Mg_chelatase PF01078.21 gi|14521486|ref|NP_126962.1| - 0.14 11.5 0.6 5.3 6.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI DUF58 PF01882.18 gi|14521487|ref|NP_126963.1| - 5.7e-22 77.8 0.0 1.1e-21 76.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function DUF58 bMG10 PF17973.1 gi|14521487|ref|NP_126963.1| - 0.0058 16.8 0.3 0.041 14.1 0.0 2.3 2 1 1 3 3 3 1 Bacterial Alpha-2-macroglobulin MG10 domain RNA_pol_A_bac PF01000.26 gi|14521487|ref|NP_126963.1| - 0.084 13.2 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb3/RpoA insert domain MFS_1 PF07690.16 gi|14521489|ref|NP_126965.1| - 9.4e-21 74.1 38.8 1.4e-20 73.5 38.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Aminotran_1_2 PF00155.21 gi|14521490|ref|NP_126966.1| - 4.6e-73 246.5 0.0 5.2e-73 246.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|14521490|ref|NP_126966.1| - 6.4e-09 35.6 0.0 1e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|14521490|ref|NP_126966.1| - 1.9e-06 27.1 0.0 9.8e-05 21.5 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|14521490|ref|NP_126966.1| - 0.004 16.5 0.0 0.0076 15.6 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|14521490|ref|NP_126966.1| - 0.074 11.6 0.0 0.17 10.4 0.0 1.5 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme CGI-121 PF08617.10 gi|14521491|ref|NP_126967.1| - 5.8e-06 26.5 0.0 9.1e-06 25.9 0.0 1.4 1 1 0 1 1 1 1 Kinase binding protein CGI-121 RHH_1 PF01402.21 gi|33356780|ref|NP_877689.1| - 9.1e-11 41.3 0.0 1.6e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|33356780|ref|NP_877689.1| - 4.3e-05 23.7 0.0 4.3e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family VapB_antitoxin PF09957.9 gi|33356780|ref|NP_877689.1| - 0.051 13.5 1.3 0.078 12.9 1.3 1.4 1 1 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB ParD_antitoxin PF03693.14 gi|33356780|ref|NP_877689.1| - 0.07 13.5 0.0 0.075 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Tubulin PF00091.25 gi|14521492|ref|NP_126968.1| - 1e-40 140.0 0.1 2.2e-40 139.0 0.1 1.6 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|14521492|ref|NP_126968.1| - 1.2e-23 83.2 0.9 3.9e-23 81.6 0.9 2.0 1 0 0 1 1 1 1 FtsZ family, C-terminal domain AlaDh_PNT_C PF01262.21 gi|14521492|ref|NP_126968.1| - 0.027 13.8 0.2 0.05 12.9 0.2 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AAA_31 PF13614.6 gi|14521493|ref|NP_126969.1| - 3.1e-54 183.6 0.1 4e-54 183.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|14521493|ref|NP_126969.1| - 1.3e-27 96.3 0.0 1.7e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|14521493|ref|NP_126969.1| - 7.9e-14 51.7 1.4 5.4e-13 49.0 1.4 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|14521493|ref|NP_126969.1| - 3.3e-13 49.7 0.1 2.2e-05 24.0 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|14521493|ref|NP_126969.1| - 2.6e-12 46.7 0.0 9.5e-12 44.9 0.0 1.7 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|14521493|ref|NP_126969.1| - 8.4e-11 41.6 0.1 5.7e-09 35.6 0.1 2.1 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|14521493|ref|NP_126969.1| - 1.1e-09 37.9 0.9 2.4e-08 33.5 0.4 2.8 1 1 0 2 2 2 1 Anion-transporting ATPase MeaB PF03308.16 gi|14521493|ref|NP_126969.1| - 0.018 14.0 0.0 0.026 13.5 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB VirC1 PF07015.11 gi|14521493|ref|NP_126969.1| - 0.019 14.3 0.3 0.095 12.0 0.0 2.1 2 1 1 3 3 3 0 VirC1 protein AAA_24 PF13479.6 gi|14521493|ref|NP_126969.1| - 0.036 13.8 0.0 0.098 12.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|14521493|ref|NP_126969.1| - 0.038 13.8 0.1 0.079 12.7 0.1 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_25 PF13481.6 gi|14521493|ref|NP_126969.1| - 0.081 12.5 0.0 0.14 11.8 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_26 PF13500.6 gi|14521493|ref|NP_126969.1| - 0.21 11.4 0.9 7.4 6.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain PRC PF05239.16 gi|14521493|ref|NP_126969.1| - 0.36 10.9 2.9 0.99 9.5 1.1 2.6 2 1 1 3 3 3 0 PRC-barrel domain PGAP1 PF07819.13 gi|14521494|ref|NP_126970.1| - 0.025 14.3 0.0 0.027 14.2 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein Succ_CoA_lig PF13607.6 gi|14521495|ref|NP_126971.1| - 3e-56 189.1 0.7 4.9e-55 185.1 0.6 2.6 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|14521495|ref|NP_126971.1| - 2.6e-32 111.7 0.2 1.2e-28 99.9 0.1 2.5 2 0 0 2 2 2 2 CoA binding domain CoA_binding PF02629.19 gi|14521495|ref|NP_126971.1| - 4.9e-18 65.6 2.5 8e-18 64.9 1.2 2.2 2 0 0 2 2 2 1 CoA binding domain TPP_enzyme_C PF02775.21 gi|14521496|ref|NP_126972.1| - 5.8e-30 104.1 0.6 1.7e-29 102.6 0.3 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|14521496|ref|NP_126972.1| - 1.7e-17 64.0 0.1 2.6e-17 63.4 0.1 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|14521496|ref|NP_126972.1| - 9.4e-09 34.7 18.4 9.7e-07 28.4 2.4 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521496|ref|NP_126972.1| - 1.7e-07 31.7 8.6 1.7e-07 31.7 8.6 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14521496|ref|NP_126972.1| - 7.7e-07 29.2 9.4 1.6e-06 28.1 9.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521496|ref|NP_126972.1| - 3.2e-06 27.2 11.1 7.6e-06 26.0 11.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14521496|ref|NP_126972.1| - 2.1e-05 24.6 8.7 0.00024 21.2 9.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521496|ref|NP_126972.1| - 2.1e-05 24.3 19.5 7.9e-05 22.5 2.1 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|14521496|ref|NP_126972.1| - 0.0009 20.1 4.7 0.051 14.5 0.3 2.8 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|14521496|ref|NP_126972.1| - 0.0014 18.6 18.5 0.02 15.0 2.9 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain DXP_synthase_N PF13292.6 gi|14521496|ref|NP_126972.1| - 0.13 11.5 0.9 0.96 8.6 0.7 2.1 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase Fer4_13 PF13370.6 gi|14521496|ref|NP_126972.1| - 0.24 12.0 12.1 1.2 9.7 2.3 3.3 3 1 1 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|14521496|ref|NP_126972.1| - 0.53 10.9 10.2 2.4e+02 2.4 10.2 2.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Endonuclease_7 PF02945.15 gi|14521496|ref|NP_126972.1| - 1.5 8.8 3.7 3.7 7.5 3.7 1.5 1 0 0 1 1 1 0 Recombination endonuclease VII Fer4_15 PF13459.6 gi|14521496|ref|NP_126972.1| - 4.4 8.1 7.6 25 5.7 1.0 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain POR PF01558.18 gi|14521497|ref|NP_126973.1| - 5.2e-38 130.9 0.1 6e-38 130.7 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Na_H_Exchanger PF00999.21 gi|14521498|ref|NP_126974.1| - 1e-51 175.9 37.3 1.4e-51 175.5 37.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TFX_C PF14601.6 gi|14521499|ref|NP_126975.1| - 1.7e-24 85.6 0.0 2.9e-24 84.8 0.0 1.4 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term Sigma70_r4 PF04545.16 gi|14521499|ref|NP_126975.1| - 5.2e-06 25.9 1.7 8.8e-06 25.2 1.7 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4_2 PF08281.12 gi|14521499|ref|NP_126975.1| - 3.7e-05 23.3 0.6 7.1e-05 22.4 0.6 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.19 gi|14521499|ref|NP_126975.1| - 0.00013 21.4 1.4 0.00022 20.7 1.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_37 PF13744.6 gi|14521499|ref|NP_126975.1| - 0.0011 18.9 0.3 0.0023 17.9 0.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain KORA PF16509.5 gi|14521499|ref|NP_126975.1| - 0.034 14.4 0.5 0.067 13.5 0.4 1.5 2 0 0 2 2 2 0 TrfB plasmid transcriptional repressor MarR_2 PF12802.7 gi|14521499|ref|NP_126975.1| - 0.076 12.9 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 MarR family MarR PF01047.22 gi|14521499|ref|NP_126975.1| - 0.078 12.9 0.7 0.46 10.4 0.1 2.3 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.6 gi|14521499|ref|NP_126975.1| - 0.088 12.6 0.3 0.18 11.6 0.3 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Pex14_N PF04695.13 gi|14521499|ref|NP_126975.1| - 0.11 13.1 0.4 0.22 12.2 0.2 1.6 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region MazE_antitoxin PF04014.18 gi|33356781|ref|NP_877690.1| - 1.5e-11 43.9 0.5 2.4e-11 43.3 0.5 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Mitoc_L55 PF09776.9 gi|33356781|ref|NP_877690.1| - 0.025 14.3 0.1 0.031 14.0 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 eIF-1a PF01176.19 gi|33356781|ref|NP_877690.1| - 0.078 12.8 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 Translation initiation factor 1A / IF-1 PrlF_antitoxin PF15937.5 gi|33356781|ref|NP_877690.1| - 0.078 13.4 0.2 2.3 8.7 0.0 2.1 1 1 1 2 2 2 0 prlF antitoxin for toxin YhaV_toxin PIN PF01850.21 gi|14521500|ref|NP_126976.1| - 2.1e-20 73.5 1.2 2.3e-20 73.3 1.2 1.0 1 0 0 1 1 1 1 PIN domain ATPase_2 PF01637.18 gi|14521501|ref|NP_126977.1| - 1.7e-33 116.5 0.1 3.8e-33 115.4 0.1 1.6 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|14521501|ref|NP_126977.1| - 2.4e-29 101.7 0.3 5.8e-29 100.5 0.3 1.7 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.6 gi|14521501|ref|NP_126977.1| - 5e-08 33.1 0.1 1.5e-07 31.5 0.1 1.8 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521501|ref|NP_126977.1| - 8.5e-06 26.3 0.0 1.7e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521501|ref|NP_126977.1| - 2.2e-05 24.7 0.0 7.1e-05 23.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain HTH_45 PF14947.6 gi|14521501|ref|NP_126977.1| - 0.00041 20.3 0.1 0.0022 17.9 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix UPF0102 PF02021.17 gi|14521501|ref|NP_126977.1| - 0.00042 20.5 0.0 0.001 19.3 0.0 1.6 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 HTH_5 PF01022.20 gi|14521501|ref|NP_126977.1| - 0.011 15.6 0.0 0.028 14.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family AAA PF00004.29 gi|14521501|ref|NP_126977.1| - 0.045 14.2 0.0 0.22 11.9 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) CelTOS PF18659.1 gi|14521501|ref|NP_126977.1| - 0.079 13.4 0.3 0.19 12.2 0.1 1.8 2 0 0 2 2 1 0 Cell-traversal protein for ookinetes and sporozoites HTH_9 PF08221.11 gi|14521501|ref|NP_126977.1| - 0.093 12.8 0.1 0.44 10.7 0.0 2.1 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_IclR PF09339.10 gi|14521501|ref|NP_126977.1| - 0.16 11.8 0.0 0.36 10.7 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Thy1 PF02511.15 gi|14521502|ref|NP_126978.1| - 7.7e-65 218.2 2.7 9.2e-65 218.0 2.7 1.0 1 0 0 1 1 1 1 Thymidylate synthase complementing protein S6PP_C PF08472.10 gi|14521502|ref|NP_126978.1| - 0.039 13.8 0.1 0.064 13.1 0.1 1.3 1 0 0 1 1 1 0 Sucrose-6-phosphate phosphohydrolase C-terminal Endonuc_subdom PF09062.10 gi|14521502|ref|NP_126978.1| - 0.039 14.8 0.1 0.081 13.8 0.1 1.5 1 0 0 1 1 1 0 PI-PfuI Endonuclease subdomain GH115_C PF17829.1 gi|14521502|ref|NP_126978.1| - 0.098 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Gylcosyl hydrolase family 115 C-terminal domain VPR PF00522.18 gi|14521502|ref|NP_126978.1| - 0.16 12.0 3.9 2.7 8.1 0.2 3.2 2 1 1 3 3 3 0 VPR/VPX protein ATPase_2 PF01637.18 gi|14521503|ref|NP_126979.1| - 1.8e-18 67.3 0.3 3.3e-18 66.4 0.3 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521503|ref|NP_126979.1| - 5.1e-08 33.0 0.1 9.3e-05 22.5 0.1 2.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521503|ref|NP_126979.1| - 1.4e-06 28.8 0.1 3.1e-06 27.7 0.1 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521503|ref|NP_126979.1| - 0.02 15.1 0.0 0.054 13.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain MarC PF01914.17 gi|14521504|ref|NP_126980.1| - 7.3e-53 179.0 16.0 8.3e-53 178.8 16.0 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF3754 PF12576.8 gi|14521504|ref|NP_126980.1| - 0.24 11.3 3.2 2 8.4 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3754) Mntp PF02659.15 gi|14521504|ref|NP_126980.1| - 6.9 6.4 19.6 1.2 8.9 14.8 2.1 2 1 0 2 2 2 0 Putative manganese efflux pump FBPase_3 PF01950.16 gi|14521505|ref|NP_126981.1| - 3.9e-185 615.2 0.0 4.4e-185 615.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Biotin_lipoyl PF00364.22 gi|14521505|ref|NP_126981.1| - 0.13 12.1 0.1 2.3 8.1 0.0 2.6 1 1 1 2 2 2 0 Biotin-requiring enzyme LigB PF02900.18 gi|14521506|ref|NP_126982.1| - 1.1e-13 50.9 0.0 1.3e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF763 PF05559.11 gi|14521507|ref|NP_126983.1| - 4e-121 404.0 0.0 5.1e-121 403.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) DZR PF12773.7 gi|14521508|ref|NP_126984.1| - 0.0072 16.3 0.3 0.011 15.8 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon HTH_5 PF01022.20 gi|14521508|ref|NP_126984.1| - 0.011 15.5 0.1 0.019 14.8 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HypA PF01155.19 gi|14521508|ref|NP_126984.1| - 0.013 15.5 0.9 0.019 14.9 0.9 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|14521508|ref|NP_126984.1| - 0.063 13.4 1.7 0.12 12.5 1.7 1.5 1 0 0 1 1 1 0 Zinc ribbon domain MCM_OB PF17207.3 gi|14521508|ref|NP_126984.1| - 0.31 10.9 1.6 0.31 10.9 1.6 1.3 1 1 0 1 1 1 0 MCM OB domain Zn_ribbon_SprT PF17283.2 gi|14521508|ref|NP_126984.1| - 0.5 10.3 4.9 2.4 8.1 4.9 1.9 1 1 1 2 2 2 0 SprT-like zinc ribbon domain DiS_P_DiS PF06750.13 gi|14521508|ref|NP_126984.1| - 0.53 10.4 2.5 5.4 7.2 2.5 2.1 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zinc_ribbon_4 PF13717.6 gi|14521508|ref|NP_126984.1| - 0.55 10.2 6.1 4.2 7.4 0.8 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|14521508|ref|NP_126984.1| - 1.1 9.0 5.8 3 7.6 0.2 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain HalOD2 PF18547.1 gi|14521508|ref|NP_126984.1| - 2.1 8.3 4.5 5.7 6.9 0.6 2.2 2 0 0 2 2 2 0 Halobacterial output domain 2 Ribonucleas_3_2 PF11469.8 gi|14521509|ref|NP_126985.1| - 1.9e-58 196.1 0.8 2.1e-58 195.9 0.8 1.0 1 0 0 1 1 1 1 Ribonuclease III CtsR_C PF17727.1 gi|14521509|ref|NP_126985.1| - 0.043 13.9 0.2 0.075 13.2 0.1 1.5 1 1 0 1 1 1 0 CtsR C-terminal dimerization domain Fe-ADH PF00465.19 gi|14521510|ref|NP_126986.1| - 7.6e-97 324.4 0.0 8.6e-97 324.2 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|14521510|ref|NP_126986.1| - 5.4e-12 45.9 0.0 1.6e-05 24.7 0.0 2.2 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase RHH_3 PF12651.7 gi|14521510|ref|NP_126986.1| - 0.17 11.9 0.8 0.4 10.7 0.1 1.9 2 0 0 2 2 2 0 Ribbon-helix-helix domain TBPIP_N PF15517.6 gi|14521511|ref|NP_126987.1| - 7.5e-42 141.4 1.5 1e-41 141.0 0.5 1.7 2 0 0 2 2 2 1 TBP-interacting protein N-terminus zf-C2H2_4 PF13894.6 gi|14521511|ref|NP_126987.1| - 0.0042 17.8 1.8 0.011 16.5 1.8 1.7 1 0 0 1 1 1 1 C2H2-type zinc finger DUF629 PF04780.12 gi|14521511|ref|NP_126987.1| - 0.013 14.1 0.2 0.019 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF629) PRP21_like_P PF12230.8 gi|14521511|ref|NP_126987.1| - 0.034 14.0 0.1 0.082 12.8 0.0 1.7 2 0 0 2 2 2 0 Pre-mRNA splicing factor PRP21 like protein Sgf11 PF08209.11 gi|14521511|ref|NP_126987.1| - 0.042 13.4 0.1 0.066 12.8 0.1 1.3 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) Stc1 PF12898.7 gi|14521511|ref|NP_126987.1| - 0.12 13.0 0.0 0.25 11.9 0.0 1.6 1 0 0 1 1 1 0 Stc1 domain zf-BED PF02892.15 gi|14521511|ref|NP_126987.1| - 0.13 12.3 1.6 0.16 12.0 0.4 1.7 2 0 0 2 2 2 0 BED zinc finger zf-C2H2 PF00096.26 gi|14521511|ref|NP_126987.1| - 0.18 12.3 3.8 0.38 11.3 3.8 1.6 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-Di19 PF05605.12 gi|14521511|ref|NP_126987.1| - 0.21 11.9 0.9 0.37 11.1 0.4 1.7 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding AIRS_C PF02769.22 gi|14521512|ref|NP_126988.1| - 6.1e-33 114.2 1.2 8.6e-33 113.7 1.2 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|14521512|ref|NP_126988.1| - 8.7e-18 64.8 0.2 2.1e-17 63.6 0.2 1.6 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Mut7-C PF01927.16 gi|14521513|ref|NP_126989.1| - 4.2e-45 153.4 0.0 4.7e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|14521513|ref|NP_126989.1| - 1.6e-06 27.8 0.0 3.7e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF5615) zf_CopZ PF18423.1 gi|14521513|ref|NP_126989.1| - 0.013 15.4 0.6 0.021 14.8 0.6 1.3 1 0 0 1 1 1 0 Zinc binding domain Zn-ribbon_8 PF09723.10 gi|14521513|ref|NP_126989.1| - 0.04 14.0 1.4 11 6.2 0.4 2.6 2 1 0 2 2 2 0 Zinc ribbon domain PIN_9 PF18477.1 gi|14521513|ref|NP_126989.1| - 0.046 14.0 0.0 0.076 13.3 0.0 1.3 1 0 0 1 1 1 0 PIN like domain zf-ACC PF17848.1 gi|14521513|ref|NP_126989.1| - 0.063 13.4 3.2 6.6 6.9 0.4 2.7 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain Rubredoxin PF00301.20 gi|14521513|ref|NP_126989.1| - 0.096 12.7 3.1 6.1 7.0 0.0 2.7 3 0 0 3 3 3 0 Rubredoxin DUF35_N PF12172.8 gi|14521513|ref|NP_126989.1| - 0.11 12.4 5.4 2.1 8.3 0.6 2.9 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 gi|14521513|ref|NP_126989.1| - 0.26 11.2 3.8 0.93 9.4 0.3 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Zn_ribbon_SprT PF17283.2 gi|14521513|ref|NP_126989.1| - 0.27 11.2 2.0 9.2 6.3 0.6 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 gi|14521513|ref|NP_126989.1| - 0.42 10.1 2.8 9.3 5.8 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C4_Topoisom PF01396.19 gi|14521513|ref|NP_126989.1| - 0.45 10.3 3.0 2 8.3 0.2 2.7 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-RRN7 PF11781.8 gi|14521513|ref|NP_126989.1| - 1.8 8.3 6.2 6.6 6.5 2.2 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TF_Zn_Ribbon PF08271.12 gi|14521513|ref|NP_126989.1| - 3.8 7.1 6.4 32 4.1 6.4 2.3 1 1 0 1 1 1 0 TFIIB zinc-binding Peptidase_M42 PF05343.14 gi|14521514|ref|NP_126990.1| - 4.5e-71 239.2 0.0 5.4e-71 239.0 0.0 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|14521514|ref|NP_126990.1| - 0.00027 20.7 0.1 0.00045 20.0 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Prot_ATP_ID_OB PF16450.5 gi|14521514|ref|NP_126990.1| - 0.013 15.4 0.0 0.22 11.5 0.0 2.6 2 1 0 2 2 2 0 Proteasomal ATPase OB C-terminal domain Peptidase_M28 PF04389.17 gi|14521514|ref|NP_126990.1| - 0.045 13.4 0.0 3.6 7.2 0.0 2.2 2 0 0 2 2 2 0 Peptidase family M28 Acetyltransf_1 PF00583.25 gi|14521515|ref|NP_126991.1| - 1.3e-17 64.1 0.1 1.6e-17 63.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|14521515|ref|NP_126991.1| - 4.7e-13 49.4 0.2 7e-13 48.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|14521515|ref|NP_126991.1| - 3.2e-11 43.3 0.0 1.6e-10 41.0 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|14521515|ref|NP_126991.1| - 4.1e-05 23.5 0.0 5.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|14521515|ref|NP_126991.1| - 0.00088 19.3 0.0 0.0054 16.8 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|14521515|ref|NP_126991.1| - 0.0042 17.2 0.0 0.0086 16.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|14521515|ref|NP_126991.1| - 0.017 14.6 0.0 0.042 13.3 0.0 1.7 2 1 0 2 2 2 0 Putative acetyl-transferase CTP_transf_like PF01467.26 gi|14521516|ref|NP_126992.1| - 8.8e-26 90.8 0.0 1e-25 90.6 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like Peripla_BP_2 PF01497.18 gi|14521516|ref|NP_126992.1| - 0.00051 19.7 0.0 0.00056 19.5 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein FAD_syn PF06574.12 gi|14521516|ref|NP_126992.1| - 0.0014 18.5 0.1 0.013 15.4 0.1 2.0 2 0 0 2 2 2 1 FAD synthetase Usp PF00582.26 gi|14521516|ref|NP_126992.1| - 0.088 13.3 0.4 0.27 11.7 0.4 1.8 1 1 0 1 1 1 0 Universal stress protein family B12-binding PF02310.19 gi|14521516|ref|NP_126992.1| - 0.26 11.3 1.1 39 4.3 0.1 3.2 2 1 1 3 3 3 0 B12 binding domain PUA PF01472.20 gi|14521517|ref|NP_126993.1| - 7.4e-25 86.7 1.9 7.4e-25 86.7 1.9 1.7 2 0 0 2 2 2 1 PUA domain Pre-PUA PF17832.1 gi|14521517|ref|NP_126993.1| - 7.5e-07 29.8 0.1 1.1e-06 29.2 0.1 1.3 1 0 0 1 1 1 1 Pre-PUA-like domain DUF1947 PF09183.10 gi|14521517|ref|NP_126993.1| - 1.3e-06 28.6 0.8 3.3e-06 27.3 0.8 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF1947) UPF0113 PF03657.13 gi|14521517|ref|NP_126993.1| - 6.3e-06 26.4 0.1 1.1e-05 25.5 0.1 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain SpoVIF PF14069.6 gi|14521517|ref|NP_126993.1| - 0.071 12.9 0.1 1.8 8.4 0.0 2.8 3 1 0 3 3 3 0 Stage VI sporulation protein F OMPdecase PF00215.24 gi|14521518|ref|NP_126994.1| - 7.2e-40 137.0 0.0 9.3e-40 136.6 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|14521518|ref|NP_126994.1| - 0.0048 16.4 0.3 0.019 14.4 0.1 1.7 1 1 0 2 2 2 1 PcrB family NanE PF04131.14 gi|14521518|ref|NP_126994.1| - 0.0052 16.0 0.1 0.24 10.6 0.0 2.4 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.17 gi|14521518|ref|NP_126994.1| - 0.073 12.4 0.1 4.4 6.6 0.0 2.9 3 0 0 3 3 3 0 Thiamine monophosphate synthase Dus PF01207.17 gi|14521518|ref|NP_126994.1| - 0.077 12.1 0.1 3.3 6.7 0.0 2.1 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) ThiG PF05690.14 gi|14521518|ref|NP_126994.1| - 0.093 12.0 0.0 0.2 11.0 0.0 1.5 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG PEP_hydrolase PF09370.10 gi|14521518|ref|NP_126994.1| - 0.11 11.8 0.0 3.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Phosphoenolpyruvate hydrolase-like KH_1 PF00013.29 gi|14521518|ref|NP_126994.1| - 0.15 11.9 1.1 0.54 10.1 0.1 2.2 2 1 0 2 2 2 0 KH domain DUF4443 PF14544.6 gi|14521519|ref|NP_126995.1| - 7.5e-39 132.4 0.1 1.4e-38 131.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4443) HTH_41 PF14502.6 gi|14521519|ref|NP_126995.1| - 0.00017 21.2 0.4 0.00037 20.1 0.3 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_12 PF08461.10 gi|14521519|ref|NP_126995.1| - 0.00075 19.4 0.9 0.0013 18.6 0.3 1.7 2 0 0 2 2 1 1 Ribonuclease R winged-helix domain HTH_29 PF13551.6 gi|14521519|ref|NP_126995.1| - 0.0017 18.4 0.0 0.003 17.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_5 PF01022.20 gi|14521519|ref|NP_126995.1| - 0.0017 18.2 0.1 0.0027 17.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HrcA_DNA-bdg PF03444.15 gi|14521519|ref|NP_126995.1| - 0.0018 17.9 0.1 0.0046 16.6 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TrmB PF01978.19 gi|14521519|ref|NP_126995.1| - 0.0033 17.3 0.0 0.0056 16.5 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14521519|ref|NP_126995.1| - 0.005 16.4 0.1 0.0087 15.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|14521519|ref|NP_126995.1| - 0.0059 16.5 0.2 0.01 15.8 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|14521519|ref|NP_126995.1| - 0.0075 16.2 0.0 0.022 14.7 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|14521519|ref|NP_126995.1| - 0.008 16.1 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix Ribosomal_S19e PF01090.19 gi|14521519|ref|NP_126995.1| - 0.01 15.6 0.1 0.016 14.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_11 PF08279.12 gi|14521519|ref|NP_126995.1| - 0.018 15.0 0.2 0.03 14.3 0.2 1.4 1 0 0 1 1 1 0 HTH domain DUF742 PF05331.11 gi|14521519|ref|NP_126995.1| - 0.019 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF742) HTH_IclR PF09339.10 gi|14521519|ref|NP_126995.1| - 0.02 14.7 0.0 0.037 13.8 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|14521519|ref|NP_126995.1| - 0.023 14.9 0.0 0.037 14.2 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4_2 PF08281.12 gi|14521519|ref|NP_126995.1| - 0.026 14.2 0.0 0.096 12.4 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 Penicillinase_R PF03965.16 gi|14521519|ref|NP_126995.1| - 0.026 14.9 0.1 0.041 14.2 0.1 1.3 1 0 0 1 1 1 0 Penicillinase repressor Rrf2 PF02082.20 gi|14521519|ref|NP_126995.1| - 0.027 14.8 0.1 0.053 13.9 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 gi|14521519|ref|NP_126995.1| - 0.029 14.3 0.0 0.053 13.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|14521519|ref|NP_126995.1| - 0.037 14.1 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|14521519|ref|NP_126995.1| - 0.046 13.4 0.1 0.086 12.5 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family PaaX PF07848.12 gi|14521519|ref|NP_126995.1| - 0.068 13.4 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein TFIIE_alpha PF02002.17 gi|14521519|ref|NP_126995.1| - 0.072 13.0 0.2 0.19 11.6 0.1 1.7 2 0 0 2 2 2 0 TFIIE alpha subunit Replic_Relax PF13814.6 gi|14521519|ref|NP_126995.1| - 0.09 12.8 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation HTH_40 PF14493.6 gi|14521519|ref|NP_126995.1| - 0.098 13.1 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Mrr_N PF14338.6 gi|14521519|ref|NP_126995.1| - 0.13 12.4 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain GerE PF00196.19 gi|14521519|ref|NP_126995.1| - 0.17 11.4 0.0 0.35 10.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF43 PF01861.16 gi|14521520|ref|NP_126996.1| - 2.4e-124 413.4 0.5 3e-124 413.1 0.5 1.1 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain zf-FPG_IleRS PF06827.14 gi|14521520|ref|NP_126996.1| - 0.0059 16.5 0.2 0.015 15.1 0.0 1.8 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS N6-adenineMlase PF10237.9 gi|14521520|ref|NP_126996.1| - 0.0077 16.1 0.1 0.014 15.2 0.0 1.6 1 1 0 1 1 1 1 Probable N6-adenine methyltransferase Methyltransf_31 PF13847.6 gi|14521520|ref|NP_126996.1| - 0.024 14.4 0.0 0.066 13.0 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain DUF1217 PF06748.12 gi|14521520|ref|NP_126996.1| - 0.029 14.4 0.0 0.049 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1217) OTCace PF00185.24 gi|14521522|ref|NP_126998.1| - 2.1e-65 219.6 0.1 3.3e-65 219.0 0.1 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|14521522|ref|NP_126998.1| - 4.2e-54 182.6 0.0 1e-53 181.3 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TP_methylase PF00590.20 gi|14521523|ref|NP_126999.1| - 2.9e-20 73.2 0.0 3.4e-20 72.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF1788 PF08747.11 gi|14521523|ref|NP_126999.1| - 0.032 14.2 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1788) KH_2 PF07650.17 gi|14521523|ref|NP_126999.1| - 0.063 13.1 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 KH domain Peptidase_M20 PF01546.28 gi|14521524|ref|NP_127000.1| - 5.6e-37 127.4 0.8 7.5e-37 127.0 0.8 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|14521524|ref|NP_127000.1| - 2.3e-13 50.0 0.2 8.2e-13 48.2 0.0 2.0 2 0 0 2 2 2 1 Peptidase dimerisation domain PyrI PF01948.18 gi|14521525|ref|NP_127001.1| - 5.7e-37 125.9 1.5 7.8e-37 125.4 1.5 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|14521525|ref|NP_127001.1| - 3.4e-21 74.9 4.6 7.4e-21 73.8 4.6 1.6 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|14521526|ref|NP_127002.1| - 2.3e-52 176.9 0.0 3.5e-52 176.4 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|14521526|ref|NP_127002.1| - 8.8e-32 110.3 0.0 1.4e-31 109.7 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FTP PF07504.13 gi|14521526|ref|NP_127002.1| - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif UPF0180 PF03698.13 gi|14521526|ref|NP_127002.1| - 0.087 13.0 0.1 22 5.3 0.0 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) PadR PF03551.14 gi|14521527|ref|NP_127003.1| - 9.7e-16 57.5 0.3 1.3e-15 57.1 0.3 1.1 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|14521527|ref|NP_127003.1| - 2.5e-05 24.9 0.0 3e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Replication terminator protein HTH_34 PF13601.6 gi|14521527|ref|NP_127003.1| - 0.00021 21.4 0.0 0.00027 21.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_12 PF08461.10 gi|14521527|ref|NP_127003.1| - 0.00045 20.1 0.1 0.00078 19.3 0.1 1.4 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_27 PF13463.6 gi|14521527|ref|NP_127003.1| - 0.014 15.8 0.7 0.23 12.0 0.1 2.4 2 1 1 3 3 3 0 Winged helix DNA-binding domain MarR PF01047.22 gi|14521527|ref|NP_127003.1| - 0.021 14.7 0.0 0.037 14.0 0.0 1.6 1 1 0 1 1 1 0 MarR family DUF505 PF04458.12 gi|14521527|ref|NP_127003.1| - 0.09 11.1 0.0 0.095 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) MFS_1 PF07690.16 gi|14521528|ref|NP_127004.1| - 3.4e-45 154.5 25.9 1.1e-28 100.3 6.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|14521528|ref|NP_127004.1| - 1e-10 40.8 16.3 1e-10 40.8 16.3 1.5 1 1 0 1 1 1 1 MFS/sugar transport protein Sugar_tr PF00083.24 gi|14521528|ref|NP_127004.1| - 5.4e-09 35.4 23.5 7.3e-07 28.4 2.8 2.5 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|14521528|ref|NP_127004.1| - 1.6e-08 33.8 19.0 8.2e-08 31.5 19.0 1.9 1 1 0 1 1 1 1 MFS_1 like family PUCC PF03209.15 gi|14521528|ref|NP_127004.1| - 1.3e-05 24.4 13.7 0.0022 17.1 4.9 3.5 3 1 0 3 3 3 2 PUCC protein YtxH PF12732.7 gi|14521528|ref|NP_127004.1| - 0.59 10.7 0.1 0.59 10.7 0.1 1.9 2 0 0 2 2 2 0 YtxH-like protein OATP PF03137.20 gi|14521528|ref|NP_127004.1| - 2.9 6.1 13.2 0.88 7.8 1.1 3.0 2 2 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family Squash PF00299.18 gi|14521530|ref|NP_127006.1| - 0.02 14.9 0.1 0.02 14.9 0.1 1.8 2 0 0 2 2 2 0 Squash family serine protease inhibitor ThiP_synth PF10120.9 gi|14521531|ref|NP_127007.1| - 2.3e-49 167.2 0.2 5.2e-49 166.0 0.0 1.6 2 0 0 2 2 2 1 Thiamine-phosphate synthase HTH_23 PF13384.6 gi|14521531|ref|NP_127007.1| - 1.1e-05 25.0 0.0 0.00017 21.2 0.0 2.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_3 PF01381.22 gi|14521531|ref|NP_127007.1| - 0.00054 20.0 0.0 0.0025 17.8 0.0 2.2 1 0 0 1 1 1 1 Helix-turn-helix YdaS_antitoxin PF15943.5 gi|14521531|ref|NP_127007.1| - 0.0053 16.6 0.0 0.02 14.7 0.0 2.0 1 1 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_19 PF12844.7 gi|14521531|ref|NP_127007.1| - 0.0065 16.5 0.3 0.097 12.7 0.1 2.8 2 1 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|14521531|ref|NP_127007.1| - 0.0089 15.9 0.0 0.031 14.2 0.0 2.0 2 1 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) Cro PF09048.10 gi|14521531|ref|NP_127007.1| - 0.012 15.6 0.0 0.04 14.0 0.0 1.8 2 0 0 2 2 2 0 Cro HTH_8 PF02954.19 gi|14521531|ref|NP_127007.1| - 0.028 14.2 0.2 6 6.7 0.0 2.9 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family RepB PF07506.11 gi|14521531|ref|NP_127007.1| - 0.034 14.2 0.1 0.093 12.8 0.1 1.6 1 1 0 1 1 1 0 RepB plasmid partitioning protein POC3_POC4 PF10448.9 gi|14521531|ref|NP_127007.1| - 0.071 13.1 0.0 0.37 10.8 0.0 1.9 2 0 0 2 2 2 0 20S proteasome chaperone assembly proteins 3 and 4 KorB PF08535.10 gi|14521531|ref|NP_127007.1| - 0.074 13.1 0.0 0.25 11.4 0.0 2.0 1 0 0 1 1 1 0 KorB domain Ribonuc_red_lgN PF00317.21 gi|14521531|ref|NP_127007.1| - 0.097 12.7 0.1 0.29 11.2 0.0 1.8 2 0 0 2 2 2 0 Ribonucleotide reductase, all-alpha domain UPF0047 PF01894.17 gi|14521532|ref|NP_127008.1| - 7.2e-37 126.1 0.0 8.5e-37 125.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF45 PF01863.17 gi|14521533|ref|NP_127009.1| - 3.5e-34 118.7 1.1 1.5e-29 103.6 1.0 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF45 SprT-like PF10263.9 gi|14521533|ref|NP_127009.1| - 0.001 18.9 0.1 0.0016 18.3 0.1 1.3 1 0 0 1 1 1 1 SprT-like family WLM PF08325.10 gi|14521533|ref|NP_127009.1| - 0.0098 16.0 0.6 0.017 15.2 0.6 1.3 1 0 0 1 1 1 1 WLM domain RNA_Me_trans PF04252.13 gi|14521534|ref|NP_127010.1| - 1.6e-06 27.8 0.0 3.5e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase tRNA-synt_2b PF00587.25 gi|14521535|ref|NP_127011.1| - 4.4e-38 131.0 0.0 7.3e-38 130.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|14521535|ref|NP_127011.1| - 2.8e-27 95.1 10.3 4.8e-27 94.3 10.3 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain bZIP_1 PF00170.21 gi|14521535|ref|NP_127011.1| - 0.00077 19.5 6.1 0.0017 18.4 6.1 1.6 1 0 0 1 1 1 1 bZIP transcription factor UvrB_inter PF17757.1 gi|14521535|ref|NP_127011.1| - 0.009 16.2 0.5 0.025 14.7 0.3 1.9 1 1 0 1 1 1 1 UvrB interaction domain HAUS-augmin3 PF14932.6 gi|14521535|ref|NP_127011.1| - 0.058 13.0 0.5 0.14 11.8 0.4 1.6 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 TMF_TATA_bd PF12325.8 gi|14521535|ref|NP_127011.1| - 0.096 12.9 2.4 0.2 11.9 2.4 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding TPR_MLP1_2 PF07926.12 gi|14521535|ref|NP_127011.1| - 0.12 12.4 4.9 0.24 11.5 4.9 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein FapA PF03961.13 gi|14521535|ref|NP_127011.1| - 0.13 10.9 3.5 0.19 10.3 3.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A BLOC1_2 PF10046.9 gi|14521535|ref|NP_127011.1| - 0.24 11.7 1.2 0.53 10.6 1.2 1.5 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4164 PF13747.6 gi|14521535|ref|NP_127011.1| - 0.26 11.6 4.7 0.49 10.7 4.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Syntaxin-18_N PF10496.9 gi|14521535|ref|NP_127011.1| - 0.36 11.1 1.8 0.92 9.8 1.8 1.6 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Med30 PF11315.8 gi|14521535|ref|NP_127011.1| - 0.43 10.8 3.0 0.46 10.7 0.8 2.1 2 1 0 2 2 2 0 Mediator complex subunit 30 DUF4201 PF13870.6 gi|14521535|ref|NP_127011.1| - 0.63 9.7 9.0 1.1 8.9 9.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) Spc7 PF08317.11 gi|14521535|ref|NP_127011.1| - 2 7.2 7.6 5 5.9 7.6 1.6 1 0 0 1 1 1 0 Spc7 kinetochore protein APG6_N PF17675.1 gi|14521535|ref|NP_127011.1| - 6.6 7.3 12.9 2.9 8.4 2.3 2.9 2 1 1 3 3 3 0 Apg6 coiled-coil region PIN_6 PF17146.4 gi|14521536|ref|NP_127012.1| - 8.6e-21 74.2 0.4 1.3e-20 73.7 0.4 1.2 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|14521536|ref|NP_127012.1| - 3.6e-08 33.1 0.4 2.9e-07 30.1 0.2 1.9 1 1 1 2 2 2 1 PINc domain ribonuclease PIN PF01850.21 gi|14521536|ref|NP_127012.1| - 6.2e-05 23.5 0.6 0.00041 20.8 0.2 1.9 1 1 1 2 2 2 1 PIN domain Zn-ribbon_8 PF09723.10 gi|14521536|ref|NP_127012.1| - 0.0015 18.6 0.2 0.003 17.6 0.2 1.5 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|14521536|ref|NP_127012.1| - 0.0042 17.1 0.1 0.0086 16.1 0.1 1.5 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HTH_8 PF02954.19 gi|14521536|ref|NP_127012.1| - 0.012 15.4 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Zn_ribbon_SprT PF17283.2 gi|14521536|ref|NP_127012.1| - 0.02 14.8 4.8 0.68 9.9 0.9 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DZR PF12773.7 gi|14521536|ref|NP_127012.1| - 0.021 14.9 0.1 0.032 14.3 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Prok-RING_1 PF14446.6 gi|14521536|ref|NP_127012.1| - 0.026 14.5 1.0 0.041 13.8 1.0 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|14521536|ref|NP_127012.1| - 0.039 13.9 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 zinc-ribbons ADK_lid PF05191.14 gi|14521536|ref|NP_127012.1| - 0.046 13.7 2.0 0.082 12.9 2.0 1.4 1 0 0 1 1 1 0 Adenylate kinase, active site lid NOB1_Zn_bind PF08772.11 gi|14521536|ref|NP_127012.1| - 0.075 13.2 0.2 0.13 12.4 0.2 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like TF_Zn_Ribbon PF08271.12 gi|14521536|ref|NP_127012.1| - 0.15 11.6 1.1 8.3 6.0 0.2 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding UPF0242 PF06785.11 gi|14521537|ref|NP_127013.1| - 0.0026 17.9 0.6 0.0032 17.6 0.6 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus YabA PF06156.13 gi|14521537|ref|NP_127013.1| - 0.0033 18.0 1.7 0.0056 17.3 1.7 1.4 1 0 0 1 1 1 1 Initiation control protein YabA ZapB PF06005.12 gi|14521537|ref|NP_127013.1| - 0.018 15.4 6.3 0.036 14.5 6.3 1.5 1 0 0 1 1 1 0 Cell division protein ZapB Ax_dynein_light PF10211.9 gi|14521537|ref|NP_127013.1| - 0.03 14.3 0.2 0.035 14.1 0.2 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain V_ATPase_I PF01496.19 gi|14521537|ref|NP_127013.1| - 0.032 12.2 0.1 0.036 12.0 0.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ADIP PF11559.8 gi|14521537|ref|NP_127013.1| - 0.035 14.2 0.9 0.053 13.6 0.9 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding TMF_TATA_bd PF12325.8 gi|14521537|ref|NP_127013.1| - 0.044 14.0 0.7 0.092 13.0 0.7 1.6 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF4635 PF15466.6 gi|14521537|ref|NP_127013.1| - 0.047 13.2 0.4 0.066 12.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) CENP-F_leu_zip PF10473.9 gi|14521537|ref|NP_127013.1| - 0.05 13.6 6.0 0.073 13.1 6.0 1.4 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TSC22 PF01166.18 gi|14521537|ref|NP_127013.1| - 0.13 12.6 3.3 0.51 10.7 1.2 2.6 1 1 1 2 2 2 0 TSC-22/dip/bun family bZIP_1 PF00170.21 gi|14521537|ref|NP_127013.1| - 0.14 12.2 5.8 1.9 8.7 0.8 2.6 1 1 1 2 2 2 0 bZIP transcription factor bZIP_2 PF07716.15 gi|14521537|ref|NP_127013.1| - 3.9 7.6 6.9 2.7 8.1 0.4 2.7 1 1 1 2 2 2 0 Basic region leucine zipper Shugoshin_N PF07558.11 gi|14521537|ref|NP_127013.1| - 5 7.1 8.0 9.4 6.2 0.2 3.3 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region KH_5 PF13184.6 gi|14521538|ref|NP_127014.1| - 7.1e-09 35.6 0.9 1.8e-08 34.4 0.7 1.8 2 0 0 2 2 2 1 NusA-like KH domain KH_2 PF07650.17 gi|14521538|ref|NP_127014.1| - 1.4e-08 34.4 3.3 2.3e-08 33.8 3.3 1.3 1 0 0 1 1 1 1 KH domain Ribosomal_S7e PF01251.18 gi|14521538|ref|NP_127014.1| - 9e-06 25.6 0.1 2.5e-05 24.1 0.0 1.8 2 1 0 2 2 2 1 Ribosomal protein S7e KH_1 PF00013.29 gi|14521538|ref|NP_127014.1| - 1.1e-05 25.2 0.5 2.1e-05 24.2 0.5 1.5 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 gi|14521538|ref|NP_127014.1| - 0.013 15.4 0.5 0.027 14.3 0.5 1.6 1 0 0 1 1 1 0 KH domain MgtE PF01769.16 gi|14521539|ref|NP_127015.1| - 1.2e-38 132.3 20.8 3.6e-21 75.8 10.0 3.3 4 0 0 4 4 4 2 Divalent cation transporter IF-2B PF01008.17 gi|14521540|ref|NP_127016.1| - 3.9e-78 262.5 0.0 4.8e-78 262.2 0.0 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family MFS_1 PF07690.16 gi|14521541|ref|NP_127017.1| - 1.4e-24 86.7 37.1 1.8e-24 86.3 37.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|14521541|ref|NP_127017.1| - 2.3e-08 33.3 0.0 8.7e-08 31.4 0.0 2.0 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|14521541|ref|NP_127017.1| - 0.00045 19.2 15.2 0.0011 17.9 5.8 2.5 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|14521541|ref|NP_127017.1| - 0.0058 15.1 15.2 0.014 13.8 15.2 1.6 1 1 0 1 1 1 1 Transmembrane secretion effector tRNA-Thr_ED PF08915.11 gi|14521542|ref|NP_127018.1| - 4.6e-54 182.2 1.2 9e-54 181.3 0.2 2.1 2 0 0 2 2 2 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|14521542|ref|NP_127018.1| - 6.1e-27 93.6 4.2 2.5e-26 91.6 3.7 2.3 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|14521542|ref|NP_127018.1| - 5.2e-21 75.4 0.2 1.1e-20 74.4 0.2 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Phage_connect_1 PF05135.13 gi|14521542|ref|NP_127018.1| - 0.11 13.0 0.3 0.62 10.6 0.1 2.3 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein NDK PF00334.19 gi|14521543|ref|NP_127019.1| - 2e-58 196.2 0.1 2.4e-58 196.0 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase HBB PF06777.11 gi|14521544|ref|NP_127020.1| - 6.9e-71 237.9 0.0 1.4e-70 236.8 0.0 1.6 1 0 0 1 1 1 1 Helical and beta-bridge domain Helicase_C_2 PF13307.6 gi|14521544|ref|NP_127020.1| - 2e-37 129.0 0.0 4.9e-37 127.7 0.0 1.7 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|14521544|ref|NP_127020.1| - 9.1e-31 106.8 0.1 2.2e-30 105.6 0.1 1.6 2 0 0 2 2 2 1 DEAD_2 ResIII PF04851.15 gi|14521544|ref|NP_127020.1| - 1.4e-08 35.0 0.0 1.5e-07 31.6 0.0 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|14521544|ref|NP_127020.1| - 8.5e-07 28.9 0.0 0.00011 22.0 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Terminase_6 PF03237.15 gi|14521544|ref|NP_127020.1| - 0.00085 19.0 0.0 0.002 17.8 0.0 1.7 1 0 0 1 1 1 1 Terminase-like family AAA_30 PF13604.6 gi|14521544|ref|NP_127020.1| - 0.012 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_35 PF14516.6 gi|14521544|ref|NP_127020.1| - 0.1 11.4 0.0 0.15 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain Mago_nashi PF02792.14 gi|14521545|ref|NP_127021.1| - 0.021 14.9 0.1 0.025 14.7 0.1 1.1 1 0 0 1 1 1 0 Mago nashi protein TPP_enzyme_N PF02776.18 gi|14521546|ref|NP_127022.1| - 1.1e-60 204.2 0.1 2.1e-59 200.0 0.0 2.6 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|14521546|ref|NP_127022.1| - 7.4e-53 178.4 0.3 4.5e-52 175.9 0.1 2.3 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|14521546|ref|NP_127022.1| - 6e-50 168.5 0.0 1.1e-49 167.7 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 gi|14521546|ref|NP_127022.1| - 0.0037 17.1 0.0 0.0097 15.7 0.0 1.7 1 1 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit E1_dh PF00676.20 gi|14521546|ref|NP_127022.1| - 0.027 13.4 0.2 0.96 8.3 0.0 2.3 2 0 0 2 2 2 0 Dehydrogenase E1 component POR_N PF01855.19 gi|14521546|ref|NP_127022.1| - 0.12 12.1 0.7 0.48 10.1 0.2 2.1 2 0 0 2 2 2 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IlvN PF07991.12 gi|14521547|ref|NP_127023.1| - 1.2e-78 262.4 0.2 2.6e-78 261.3 0.1 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|14521547|ref|NP_127023.1| - 4.1e-54 182.8 0.2 6.4e-54 182.2 0.2 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|14521547|ref|NP_127023.1| - 2e-08 33.8 0.0 4.8e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|14521547|ref|NP_127023.1| - 3.2e-06 27.3 0.0 6.2e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F420_oxidored PF03807.17 gi|14521547|ref|NP_127023.1| - 7.2e-06 26.5 0.0 2.1e-05 25.0 0.0 1.8 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|14521547|ref|NP_127023.1| - 6e-05 23.3 0.0 0.00018 21.7 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding PF02629.19 gi|14521547|ref|NP_127023.1| - 0.0023 18.6 0.0 0.0094 16.6 0.0 2.1 2 0 0 2 2 2 1 CoA binding domain ASXH PF13919.6 gi|14521547|ref|NP_127023.1| - 0.0066 16.5 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 Asx homology domain Phage_gp53 PF11246.8 gi|14521547|ref|NP_127023.1| - 0.032 13.9 0.0 0.063 13.0 0.0 1.4 1 0 0 1 1 1 0 Base plate wedge protein 53 NAD_Gly3P_dh_N PF01210.23 gi|14521547|ref|NP_127023.1| - 0.039 13.9 0.0 8.2 6.4 0.1 3.2 2 1 1 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_7 PF13241.6 gi|14521547|ref|NP_127023.1| - 0.067 13.6 0.0 0.21 12.1 0.0 1.8 1 0 0 1 1 1 0 Putative NAD(P)-binding LpqV PF17301.2 gi|14521547|ref|NP_127023.1| - 0.091 13.0 0.0 23 5.2 0.0 3.0 2 1 1 3 3 3 0 Putative lipoprotein LpqV Rossmann-like PF10727.9 gi|14521547|ref|NP_127023.1| - 0.099 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Rossmann-like domain Shikimate_DH PF01488.20 gi|14521547|ref|NP_127023.1| - 0.14 12.2 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase HMGL-like PF00682.19 gi|14521548|ref|NP_127024.1| - 1.1e-100 336.6 3.0 1.6e-100 336.0 3.0 1.3 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|14521548|ref|NP_127024.1| - 4.3e-29 101.1 1.0 1.2e-28 99.7 0.3 2.1 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain URO-D PF01208.17 gi|14521548|ref|NP_127024.1| - 0.022 13.9 0.1 0.096 11.8 0.1 1.9 1 1 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) tRNA_bind_2 PF13725.6 gi|14521548|ref|NP_127024.1| - 0.07 12.8 0.4 0.13 11.9 0.4 1.4 1 0 0 1 1 1 0 Possible tRNA binding domain PTE PF02126.18 gi|14521548|ref|NP_127024.1| - 0.077 12.4 0.4 0.76 9.2 0.1 2.1 2 0 0 2 2 2 0 Phosphotriesterase family YjeJ PF15922.5 gi|14521548|ref|NP_127024.1| - 0.08 12.2 0.6 0.36 10.0 0.0 2.2 3 0 0 3 3 3 0 YjeJ-like DUF1002 PF06207.11 gi|14521548|ref|NP_127024.1| - 1.1 8.8 9.1 3.2 7.2 0.3 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1002) Aconitase PF00330.20 gi|14521549|ref|NP_127025.1| - 1.9e-100 337.1 0.1 2.1e-99 333.6 0.1 2.1 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|14521549|ref|NP_127025.1| - 0.011 14.4 0.0 0.019 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF521) Aconitase_C PF00694.19 gi|14521550|ref|NP_127026.1| - 3.2e-22 79.3 0.0 7.9e-22 78.0 0.0 1.7 1 1 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|14521550|ref|NP_127026.1| - 3e-05 23.7 0.0 0.00046 19.9 0.0 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.20 gi|14521551|ref|NP_127027.1| - 6.5e-106 354.4 0.0 7.5e-106 354.2 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase HMGL-like PF00682.19 gi|14521552|ref|NP_127028.1| - 3e-48 164.7 0.0 5.8e-48 163.7 0.0 1.5 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|14521552|ref|NP_127028.1| - 9.8e-28 96.7 0.0 3.2e-27 95.0 0.0 1.9 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain Radical_SAM PF04055.21 gi|14521552|ref|NP_127028.1| - 0.076 13.4 0.4 2.8 8.3 0.1 3.0 2 1 1 3 3 3 0 Radical SAM superfamily PEP_mutase PF13714.6 gi|14521552|ref|NP_127028.1| - 0.084 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase ILVD_EDD PF00920.21 gi|14521553|ref|NP_127029.1| - 1.5e-226 753.0 0.1 1.7e-226 752.8 0.1 1.0 1 0 0 1 1 1 1 Dehydratase family Acetyltransf_1 PF00583.25 gi|14521554|ref|NP_127030.1| - 3.9e-17 62.6 0.2 6.4e-17 61.9 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|14521554|ref|NP_127030.1| - 6e-17 61.8 0.0 1.1e-16 61.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|14521554|ref|NP_127030.1| - 3.1e-16 59.6 0.1 6.3e-16 58.6 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|14521554|ref|NP_127030.1| - 1e-13 51.5 0.1 1.8e-13 50.7 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|14521554|ref|NP_127030.1| - 0.00012 21.9 0.0 0.00021 21.2 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|14521554|ref|NP_127030.1| - 0.0016 18.6 0.0 0.0034 17.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|14521554|ref|NP_127030.1| - 0.011 15.9 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase PCP_red PF08369.10 gi|14521554|ref|NP_127030.1| - 0.15 12.3 0.1 0.47 10.7 0.1 1.8 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit HEPN PF05168.14 gi|14521555|ref|NP_127031.1| - 8.2e-27 93.7 1.9 1e-26 93.4 1.9 1.1 1 0 0 1 1 1 1 HEPN domain TPR_2 PF07719.17 gi|14521555|ref|NP_127031.1| - 0.036 14.2 0.0 0.12 12.6 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat NICE-3 PF07406.11 gi|14521555|ref|NP_127031.1| - 0.038 14.0 0.4 0.082 12.9 0.2 1.5 1 1 1 2 2 2 0 NICE-3 protein NTP_transf_2 PF01909.23 gi|14521556|ref|NP_127032.1| - 2.5e-11 43.7 0.0 3.1e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|14521556|ref|NP_127032.1| - 2.9e-07 30.5 0.0 4e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|14521556|ref|NP_127032.1| - 0.0079 16.4 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm RNase_P_Rpp14 PF01900.19 gi|14521556|ref|NP_127032.1| - 0.052 13.8 0.0 0.066 13.5 0.0 1.2 1 0 0 1 1 1 0 Rpp14/Pop5 family MdcG PF10620.9 gi|14521556|ref|NP_127032.1| - 0.086 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG Adenyl_cycl_N PF12633.7 gi|14521556|ref|NP_127032.1| - 0.17 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain HEPN PF05168.14 gi|14521557|ref|NP_127033.1| - 2.4e-28 98.6 2.8 2.8e-28 98.4 2.8 1.0 1 0 0 1 1 1 1 HEPN domain TPR_1 PF00515.28 gi|14521557|ref|NP_127033.1| - 1.9 8.5 4.7 9.9 6.2 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 gi|14521557|ref|NP_127033.1| - 2.7 8.3 6.0 57 4.2 0.1 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat NTP_transf_2 PF01909.23 gi|14521558|ref|NP_127034.1| - 1.3e-12 47.8 0.3 2.3e-12 47.0 0.3 1.5 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|14521558|ref|NP_127034.1| - 8.4e-07 29.0 0.5 1e-06 28.7 0.5 1.3 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase BolA PF01722.18 gi|14521558|ref|NP_127034.1| - 0.01 16.1 0.0 0.024 14.9 0.0 1.7 1 1 1 2 2 2 0 BolA-like protein HGTP_anticodon2 PF12745.7 gi|14521558|ref|NP_127034.1| - 0.039 13.5 0.0 0.049 13.1 0.0 1.1 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs ETF PF01012.21 gi|14521558|ref|NP_127034.1| - 0.053 13.4 0.0 0.77 9.6 0.0 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein domain DUF294 PF03445.13 gi|14521558|ref|NP_127034.1| - 0.096 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DNA_pol_B_palm PF14792.6 gi|14521558|ref|NP_127034.1| - 0.12 12.5 0.0 0.26 11.5 0.0 1.5 1 1 0 1 1 1 0 DNA polymerase beta palm SHOCT PF09851.9 gi|14521558|ref|NP_127034.1| - 1.3 8.8 3.7 0.59 10.0 0.9 1.9 2 0 0 2 2 2 0 Short C-terminal domain AAA PF00004.29 gi|14521559|ref|NP_127035.1| - 3.8e-102 338.0 0.3 5.2e-51 172.5 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|14521559|ref|NP_127035.1| - 3.3e-32 110.0 3.6 1e-18 66.8 0.5 3.0 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|14521559|ref|NP_127035.1| - 7.7e-31 106.1 0.1 1.8e-29 101.7 0.9 3.0 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 gi|14521559|ref|NP_127035.1| - 7.7e-17 61.5 0.0 4.5e-08 33.0 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|14521559|ref|NP_127035.1| - 1.5e-15 58.0 2.5 2.6e-06 27.9 0.0 4.6 4 2 0 4 4 3 2 AAA ATPase domain AAA_2 PF07724.14 gi|14521559|ref|NP_127035.1| - 1.7e-15 57.5 0.9 4.4e-08 33.4 0.0 2.9 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|14521559|ref|NP_127035.1| - 4.7e-13 49.3 0.8 0.00013 22.0 0.0 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) CDC48_2 PF02933.17 gi|14521559|ref|NP_127035.1| - 4.3e-12 45.6 0.2 1.3e-11 44.1 0.2 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 TIP49 PF06068.13 gi|14521559|ref|NP_127035.1| - 5.5e-12 45.6 0.3 0.00032 20.0 0.0 3.7 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_22 PF13401.6 gi|14521559|ref|NP_127035.1| - 6.3e-12 45.9 0.5 0.00063 20.0 0.0 4.4 2 2 2 4 4 4 2 AAA domain AAA_33 PF13671.6 gi|14521559|ref|NP_127035.1| - 1.9e-10 41.1 0.0 0.00047 20.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|14521559|ref|NP_127035.1| - 2e-10 40.8 0.0 0.00028 20.9 0.0 2.8 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|14521559|ref|NP_127035.1| - 1.6e-08 34.4 0.6 0.00032 20.7 0.1 3.3 3 0 0 3 3 2 2 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|14521559|ref|NP_127035.1| - 4.2e-08 33.8 0.1 0.024 15.2 0.0 3.7 3 0 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 gi|14521559|ref|NP_127035.1| - 7.1e-08 32.4 0.0 0.013 15.2 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|14521559|ref|NP_127035.1| - 1.4e-07 31.4 0.2 0.052 13.2 0.1 4.0 3 1 0 3 3 3 2 Sigma-54 interaction domain AAA_24 PF13479.6 gi|14521559|ref|NP_127035.1| - 2.3e-07 30.8 0.0 0.009 15.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|14521559|ref|NP_127035.1| - 5.8e-07 29.9 0.0 0.065 13.6 0.0 2.8 2 0 0 2 2 2 2 RNA helicase Mg_chelatase PF01078.21 gi|14521559|ref|NP_127035.1| - 7.9e-07 28.7 0.6 0.04 13.3 0.1 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|14521559|ref|NP_127035.1| - 7.9e-07 29.5 0.0 0.029 14.6 0.0 2.8 2 0 0 2 2 2 2 AAA domain Bac_DnaA PF00308.18 gi|14521559|ref|NP_127035.1| - 1e-06 28.7 0.0 0.02 14.7 0.0 3.2 2 1 1 3 3 3 2 Bacterial dnaA protein DUF815 PF05673.13 gi|14521559|ref|NP_127035.1| - 1.3e-06 27.8 0.0 0.019 14.1 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|14521559|ref|NP_127035.1| - 3.9e-06 26.9 0.3 1.1 9.2 0.0 4.3 4 1 1 5 5 4 2 NACHT domain AAA_7 PF12775.7 gi|14521559|ref|NP_127035.1| - 4.8e-06 26.2 0.0 0.13 11.7 0.0 2.8 2 2 0 2 2 2 2 P-loop containing dynein motor region ABC_tran PF00005.27 gi|14521559|ref|NP_127035.1| - 6.5e-06 26.7 0.0 0.13 12.8 0.0 3.3 3 1 0 3 3 2 2 ABC transporter ATPase PF06745.13 gi|14521559|ref|NP_127035.1| - 2e-05 24.1 2.3 0.33 10.3 0.1 3.9 2 2 1 4 4 4 2 KaiC TsaE PF02367.17 gi|14521559|ref|NP_127035.1| - 2.6e-05 24.2 0.0 0.29 11.1 0.0 2.7 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|14521559|ref|NP_127035.1| - 2.7e-05 23.8 5.6 1.2 8.6 0.2 4.4 3 1 0 4 4 4 2 AAA domain Zeta_toxin PF06414.12 gi|14521559|ref|NP_127035.1| - 2.9e-05 23.4 0.0 0.21 10.8 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin PhoH PF02562.16 gi|14521559|ref|NP_127035.1| - 4e-05 23.2 0.5 0.27 10.7 0.1 2.6 2 0 0 2 2 2 2 PhoH-like protein ATPase_2 PF01637.18 gi|14521559|ref|NP_127035.1| - 5.2e-05 23.3 11.5 0.0028 17.6 0.0 4.7 4 1 1 5 5 5 1 ATPase domain predominantly from Archaea Parvo_NS1 PF01057.17 gi|14521559|ref|NP_127035.1| - 6.8e-05 22.1 0.2 0.28 10.3 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|14521559|ref|NP_127035.1| - 0.00011 21.6 0.1 0.23 10.7 0.0 2.8 3 0 0 3 3 3 2 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 gi|14521559|ref|NP_127035.1| - 0.00011 22.1 1.2 0.99 9.1 0.0 3.5 4 0 0 4 4 3 2 AAA domain AAA_3 PF07726.11 gi|14521559|ref|NP_127035.1| - 0.00013 21.8 0.0 0.71 9.7 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|14521559|ref|NP_127035.1| - 0.00055 20.3 0.9 3 8.2 0.0 3.4 2 1 0 3 3 3 1 AAA domain AAA_30 PF13604.6 gi|14521559|ref|NP_127035.1| - 0.00065 19.5 1.1 1.5 8.5 0.0 3.1 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.22 gi|14521559|ref|NP_127035.1| - 0.00073 18.8 0.2 1.2 8.2 0.0 2.8 3 0 0 3 3 2 2 NB-ARC domain AAA_17 PF13207.6 gi|14521559|ref|NP_127035.1| - 0.0013 19.1 1.1 4.3 7.8 0.0 3.8 3 1 0 3 3 3 0 AAA domain Sigma54_activ_2 PF14532.6 gi|14521559|ref|NP_127035.1| - 0.0015 18.7 0.0 2.1 8.4 0.0 2.7 2 0 0 2 2 2 1 Sigma-54 interaction domain Zot PF05707.12 gi|14521559|ref|NP_127035.1| - 0.0059 16.3 0.0 2 8.0 0.0 3.3 2 1 1 3 3 3 1 Zonular occludens toxin (Zot) AFG1_ATPase PF03969.16 gi|14521559|ref|NP_127035.1| - 0.0078 15.1 0.1 4 6.2 0.0 2.8 3 0 0 3 3 3 0 AFG1-like ATPase NTPase_1 PF03266.15 gi|14521559|ref|NP_127035.1| - 0.009 15.9 5.5 12 5.8 0.0 5.2 3 2 2 5 5 5 0 NTPase DUF1707 PF08044.11 gi|14521559|ref|NP_127035.1| - 0.012 15.7 0.2 18 5.5 0.1 3.9 3 0 0 3 3 3 0 Domain of unknown function (DUF1707) TniB PF05621.11 gi|14521559|ref|NP_127035.1| - 0.014 14.8 0.3 17 4.7 0.0 3.9 3 1 0 4 4 4 0 Bacterial TniB protein Viral_helicase1 PF01443.18 gi|14521559|ref|NP_127035.1| - 0.024 14.4 0.0 0.91 9.2 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|14521559|ref|NP_127035.1| - 0.028 13.5 0.0 3 6.8 0.0 2.6 2 1 0 2 2 2 0 Type II/IV secretion system protein ResIII PF04851.15 gi|14521559|ref|NP_127035.1| - 0.036 14.1 0.1 11 6.0 0.0 3.0 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit SKI PF01202.22 gi|14521559|ref|NP_127035.1| - 0.054 13.6 0.5 15 5.6 0.0 3.6 4 0 0 4 4 2 0 Shikimate kinase cobW PF02492.19 gi|14521559|ref|NP_127035.1| - 0.063 12.9 0.0 13 5.3 0.0 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 gi|14521559|ref|NP_127035.1| - 0.094 12.5 0.0 19 5.1 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Cytidylate_kin PF02224.18 gi|14521559|ref|NP_127035.1| - 0.1 12.3 4.6 15 5.3 0.0 3.7 4 0 0 4 4 4 0 Cytidylate kinase MMS19_N PF14500.6 gi|14521559|ref|NP_127035.1| - 0.1 12.1 0.4 0.67 9.5 0.0 2.1 2 0 0 2 2 2 0 Dos2-interacting transcription regulator of RNA-Pol-II IPT PF01745.16 gi|14521559|ref|NP_127035.1| - 0.11 11.9 0.2 21 4.4 0.0 2.7 2 0 0 2 2 2 0 Isopentenyl transferase PduV-EutP PF10662.9 gi|14521559|ref|NP_127035.1| - 0.12 12.1 0.0 11 5.7 0.0 2.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation KAP_NTPase PF07693.14 gi|14521559|ref|NP_127035.1| - 0.28 10.4 4.8 19 4.4 0.0 4.4 3 2 1 5 5 5 0 KAP family P-loop domain ATP-cone PF03477.16 gi|14521559|ref|NP_127035.1| - 2.9 8.5 10.4 0.17 12.5 0.6 3.9 4 0 0 4 4 2 0 ATP cone domain TPP_enzyme_C PF02775.21 gi|14521561|ref|NP_127037.1| - 1.6e-25 89.7 0.4 1.6e-25 89.7 0.4 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|14521561|ref|NP_127037.1| - 0.025 13.8 0.3 0.041 13.1 0.3 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Rep_1B PF17873.1 gi|14521561|ref|NP_127037.1| - 0.091 12.7 0.0 0.4 10.6 0.0 2.1 2 0 0 2 2 2 0 Replicase polyprotein 1ab POR_N PF01855.19 gi|14521562|ref|NP_127038.1| - 6.6e-80 268.2 0.2 9.2e-80 267.7 0.2 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|14521562|ref|NP_127038.1| - 1.8e-27 95.6 0.0 3.4e-27 94.7 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|14521562|ref|NP_127038.1| - 0.00016 21.5 0.1 0.00059 19.7 0.0 2.0 2 0 0 2 2 2 1 Transketolase, C-terminal domain DUF4290 PF14123.6 gi|14521562|ref|NP_127038.1| - 0.015 14.9 0.0 0.041 13.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4290) Fer4 PF00037.27 gi|14521563|ref|NP_127039.1| - 1.3e-12 46.9 15.0 3.5e-09 36.1 4.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14521563|ref|NP_127039.1| - 1.4e-12 47.1 13.6 8.3e-07 28.8 3.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14521563|ref|NP_127039.1| - 3.6e-11 43.0 5.4 4.9e-11 42.6 5.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521563|ref|NP_127039.1| - 2e-08 33.8 11.1 9.2e-05 22.3 2.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521563|ref|NP_127039.1| - 2.7e-08 34.3 8.7 4.9e-08 33.4 8.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521563|ref|NP_127039.1| - 1.8e-07 32.0 7.9 0.00025 21.9 2.7 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|14521563|ref|NP_127039.1| - 2.1e-06 27.8 17.5 4.2e-05 23.6 10.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521563|ref|NP_127039.1| - 3.1e-06 27.2 21.2 0.00045 20.3 11.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|14521563|ref|NP_127039.1| - 2.6e-05 24.7 5.4 0.091 13.3 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14521563|ref|NP_127039.1| - 0.00013 22.2 12.2 0.022 15.3 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|14521563|ref|NP_127039.1| - 0.002 18.9 9.2 0.052 14.3 2.0 2.6 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|14521563|ref|NP_127039.1| - 0.002 18.9 3.9 0.15 12.9 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521563|ref|NP_127039.1| - 0.0048 17.3 13.1 0.3 11.6 1.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain RPAP1_N PF08621.10 gi|14521563|ref|NP_127039.1| - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 RPAP1-like, N-terminal Fer4_13 PF13370.6 gi|14521563|ref|NP_127039.1| - 0.51 10.9 12.8 9.2e+02 0.5 12.8 2.5 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I TPP_enzyme_C PF02775.21 gi|14521564|ref|NP_127040.1| - 4.1e-20 72.1 0.0 5.7e-20 71.6 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|14521565|ref|NP_127041.1| - 3.9e-79 265.7 2.9 5e-79 265.3 2.9 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|14521565|ref|NP_127041.1| - 5.1e-34 116.6 0.0 1.1e-33 115.5 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|14521565|ref|NP_127041.1| - 0.00012 21.9 0.0 0.00031 20.6 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain DUF2156 PF09924.9 gi|14521565|ref|NP_127041.1| - 0.038 13.0 0.4 0.17 10.8 0.0 2.0 2 1 0 2 2 2 0 Uncharacterised conserved protein (DUF2156) TPP_enzyme_N PF02776.18 gi|14521565|ref|NP_127041.1| - 0.18 11.4 5.6 0.47 10.0 5.6 1.8 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4 PF00037.27 gi|14521566|ref|NP_127042.1| - 6.1e-15 54.3 17.7 2.7e-08 33.3 5.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|14521566|ref|NP_127042.1| - 7.1e-11 41.7 15.1 2.6e-06 27.3 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14521566|ref|NP_127042.1| - 1.9e-10 40.7 9.0 2.5e-10 40.3 9.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521566|ref|NP_127042.1| - 1.9e-08 34.3 22.8 3.6e-06 27.0 12.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521566|ref|NP_127042.1| - 1.3e-07 31.3 10.7 0.00026 20.9 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521566|ref|NP_127042.1| - 1.7e-07 31.7 10.8 5.7e-07 30.0 11.1 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|14521566|ref|NP_127042.1| - 1.9e-07 31.2 20.1 4.1e-06 26.9 10.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521566|ref|NP_127042.1| - 3.5e-07 31.0 10.4 0.00047 21.0 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|14521566|ref|NP_127042.1| - 6.3e-05 23.6 9.1 0.018 15.7 2.5 2.7 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|14521566|ref|NP_127042.1| - 8.7e-05 23.0 10.2 0.0053 17.3 1.0 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|14521566|ref|NP_127042.1| - 0.036 14.6 11.4 0.22 12.1 2.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14521566|ref|NP_127042.1| - 0.045 14.3 13.3 0.32 11.6 4.0 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|14521566|ref|NP_127042.1| - 0.083 13.7 9.5 0.7 10.8 2.3 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521566|ref|NP_127042.1| - 0.086 13.3 13.1 0.15 12.6 2.8 2.2 1 1 2 3 3 2 0 4Fe-4S dicluster domain POR PF01558.18 gi|14521567|ref|NP_127043.1| - 6.3e-45 153.4 0.5 7.3e-45 153.2 0.5 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase MAF_flag10 PF01973.18 gi|14521567|ref|NP_127043.1| - 0.008 15.9 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 ACP_syn_III_C PF08541.10 gi|14521568|ref|NP_127044.1| - 4.2e-12 46.1 0.0 1.3e-11 44.5 0.0 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|14521568|ref|NP_127044.1| - 3.1e-06 26.9 3.7 5.5e-06 26.1 1.0 2.2 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 gi|14521568|ref|NP_127044.1| - 4.6e-05 22.9 0.0 6.9e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain HMG_CoA_synt_C PF08540.10 gi|14521568|ref|NP_127044.1| - 0.00022 21.0 0.1 0.0093 15.6 0.0 2.2 1 1 1 2 2 2 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 gi|14521568|ref|NP_127044.1| - 0.00074 19.4 0.0 0.0017 18.2 0.0 1.6 1 1 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ketoacyl-synt PF00109.26 gi|14521568|ref|NP_127044.1| - 0.1 12.2 1.6 5.8 6.4 1.2 2.4 1 1 1 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain PTCRA PF15028.6 gi|14521568|ref|NP_127044.1| - 0.18 11.5 0.1 0.43 10.3 0.1 1.5 1 0 0 1 1 1 0 Pre-T-cell antigen receptor Thiolase_N PF00108.23 gi|14521569|ref|NP_127045.1| - 6.2e-27 94.6 0.1 1.4e-26 93.4 0.1 1.6 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|14521569|ref|NP_127045.1| - 4.7e-09 35.9 0.9 4.7e-09 35.9 0.9 2.7 4 1 0 4 4 4 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|14521569|ref|NP_127045.1| - 4.8e-06 26.3 5.3 1.2e-05 25.0 1.4 2.5 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|14521569|ref|NP_127045.1| - 0.00037 20.5 1.3 0.11 12.5 0.0 3.4 4 0 0 4 4 4 1 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|14521569|ref|NP_127045.1| - 0.0029 17.4 0.6 0.056 13.3 0.1 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALF PF03752.13 gi|14521569|ref|NP_127045.1| - 0.054 13.5 3.8 0.57 10.2 0.8 2.5 2 0 0 2 2 2 0 Short repeats of unknown function OB_aCoA_assoc PF01796.17 gi|14521570|ref|NP_127046.1| - 3.6e-21 74.9 0.1 4.8e-21 74.5 0.1 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|14521570|ref|NP_127046.1| - 4.5e-11 42.4 0.8 6.2e-11 41.9 0.8 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RRN7 PF11781.8 gi|14521570|ref|NP_127046.1| - 0.0022 17.7 0.5 0.0051 16.5 0.5 1.6 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn_Tnp_IS1595 PF12760.7 gi|14521570|ref|NP_127046.1| - 0.0051 16.8 0.1 0.0094 15.9 0.1 1.4 1 0 0 1 1 1 1 Transposase zinc-ribbon domain SoxD PF04267.12 gi|14521570|ref|NP_127046.1| - 0.0091 16.1 0.1 0.022 14.8 0.0 1.7 2 0 0 2 2 2 1 Sarcosine oxidase, delta subunit family Zn-ribbon_8 PF09723.10 gi|14521570|ref|NP_127046.1| - 0.19 11.9 1.4 0.43 10.7 1.4 1.7 1 1 0 1 1 1 0 Zinc ribbon domain HTH_Crp_2 PF13545.6 gi|14521570|ref|NP_127046.1| - 0.19 11.7 0.0 0.42 10.6 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HycI PF01750.18 gi|14521571|ref|NP_127047.1| - 6.9e-19 67.9 0.8 8e-19 67.8 0.8 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Lys_export PF03956.13 gi|33356784|ref|NP_127048.2| - 0.001 18.6 5.2 0.0012 18.4 5.2 1.0 1 0 0 1 1 1 1 Lysine exporter LysO Phage_r1t_holin PF16945.5 gi|33356784|ref|NP_127048.2| - 0.35 11.1 3.4 0.48 10.6 3.4 1.2 1 0 0 1 1 1 0 Putative lactococcus lactis phage r1t holin Lys_export PF03956.13 gi|14521573|ref|NP_127049.1| - 1.6e-55 187.6 13.7 2e-55 187.3 13.7 1.0 1 0 0 1 1 1 1 Lysine exporter LysO DUF3341 PF11821.8 gi|14521573|ref|NP_127049.1| - 0.7 9.5 4.2 0.68 9.6 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3341) Clavanin PF05452.11 gi|14521573|ref|NP_127049.1| - 1.5 9.1 5.3 1.5 9.0 0.2 2.4 2 0 0 2 2 2 0 Clavanin ABC2_membrane_5 PF13346.6 gi|14521573|ref|NP_127049.1| - 2.5 7.6 11.7 0.06 12.9 2.8 2.3 1 1 0 2 2 2 0 ABC-2 family transporter protein DUF2897 PF11446.8 gi|14521573|ref|NP_127049.1| - 4.1 7.4 5.5 2.1 8.3 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) Cob_adeno_trans PF01923.18 gi|14521574|ref|NP_127050.1| - 8.3e-47 159.4 0.0 9.3e-47 159.2 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Asp_Glu_race PF01177.22 gi|14521575|ref|NP_127051.1| - 4.7e-69 232.6 0.1 5.4e-69 232.5 0.1 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase PEP_mutase PF13714.6 gi|14521575|ref|NP_127051.1| - 0.00055 19.5 0.0 0.0017 17.8 0.0 1.7 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase AroM PF07302.11 gi|14521575|ref|NP_127051.1| - 0.00083 18.8 0.2 1.2 8.5 0.0 2.3 1 1 0 2 2 2 2 AroM protein Pantoate_transf PF02548.15 gi|14521575|ref|NP_127051.1| - 0.0023 17.4 0.2 0.024 14.0 0.0 2.1 2 0 0 2 2 2 1 Ketopantoate hydroxymethyltransferase Rota_NSP4 PF01452.16 gi|14521575|ref|NP_127051.1| - 0.099 12.3 0.4 0.25 11.0 0.0 1.8 3 0 0 3 3 3 0 Rotavirus non structural protein MFS_1 PF07690.16 gi|14521576|ref|NP_127052.1| - 1.9e-50 171.8 45.6 5e-29 101.3 22.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|14521576|ref|NP_127052.1| - 1.6e-21 76.6 24.5 4.5e-20 71.9 24.4 2.1 1 1 0 1 1 1 1 MFS_1 like family BT1 PF03092.16 gi|14521576|ref|NP_127052.1| - 4.6e-08 31.7 5.2 0.00021 19.7 0.1 3.2 2 1 0 3 3 3 3 BT1 family MFS_3 PF05977.13 gi|14521576|ref|NP_127052.1| - 4.9e-08 31.8 16.4 1.5e-07 30.2 16.4 1.7 1 1 0 1 1 1 1 Transmembrane secretion effector Sugar_tr PF00083.24 gi|14521576|ref|NP_127052.1| - 6.8e-08 31.8 40.8 3.9e-06 26.0 14.6 3.8 2 2 1 3 3 3 2 Sugar (and other) transporter OATP PF03137.20 gi|14521576|ref|NP_127052.1| - 0.041 12.2 0.3 0.041 12.2 0.3 3.2 3 1 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF5377 PF17347.2 gi|14521577|ref|NP_127053.1| - 0.0067 16.8 0.0 0.012 15.9 0.0 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5377) Sld5 PF05916.11 gi|14521577|ref|NP_127053.1| - 0.017 15.6 1.4 0.033 14.6 1.0 1.6 1 1 0 2 2 2 0 GINS complex protein PCNA_N PF00705.18 gi|14521578|ref|NP_127054.1| - 5.6e-22 77.8 0.1 2.9e-18 65.8 0.0 2.1 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|14521578|ref|NP_127054.1| - 3.1e-13 50.0 0.2 6.8e-11 42.4 0.0 2.9 3 0 0 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|14521578|ref|NP_127054.1| - 6.3e-10 38.6 0.1 5e-06 25.8 0.1 2.1 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|14521578|ref|NP_127054.1| - 1.3e-05 24.7 0.0 3.3e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Rad9 Hus1 PF04005.12 gi|14521578|ref|NP_127054.1| - 0.0021 17.2 0.0 0.0043 16.2 0.0 1.6 1 1 0 1 1 1 1 Hus1-like protein TFIIS_C PF01096.18 gi|14521579|ref|NP_127055.1| - 2e-19 69.1 13.1 3.2e-19 68.5 2.8 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|14521579|ref|NP_127055.1| - 9.8e-15 54.1 7.7 2.6e-11 43.2 0.8 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 gi|14521579|ref|NP_127055.1| - 1e-08 34.5 5.4 5.9e-05 22.5 0.9 3.2 3 0 0 3 3 3 1 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|14521579|ref|NP_127055.1| - 1.2e-06 28.4 12.8 0.00039 20.3 1.5 2.9 2 1 1 3 3 3 3 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|14521579|ref|NP_127055.1| - 7.2e-06 25.8 9.0 0.0011 18.9 0.9 3.0 2 1 0 2 2 2 2 Putative transposase DNA-binding domain UPF0547 PF10571.9 gi|14521579|ref|NP_127055.1| - 3e-05 24.0 16.4 0.14 12.3 0.2 4.2 4 0 0 4 4 4 2 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|14521579|ref|NP_127055.1| - 7.9e-05 22.2 15.6 0.066 13.0 0.2 4.3 4 0 0 4 4 4 2 zinc-ribbon domain Baculo_LEF5_C PF11792.8 gi|14521579|ref|NP_127055.1| - 0.00013 21.5 0.3 0.00013 21.5 0.3 3.6 3 1 0 3 3 3 1 Baculoviridae late expression factor 5 C-terminal domain DZR PF12773.7 gi|14521579|ref|NP_127055.1| - 0.00034 20.6 7.8 0.076 13.1 7.8 2.9 1 1 0 1 1 1 1 Double zinc ribbon IBR PF01485.21 gi|14521579|ref|NP_127055.1| - 0.00035 20.7 8.4 0.013 15.7 0.8 2.9 2 1 0 2 2 2 1 IBR domain, a half RING-finger domain Zn-ribbon_8 PF09723.10 gi|14521579|ref|NP_127055.1| - 0.00036 20.6 8.9 3.1 8.0 0.0 4.2 4 0 0 4 4 4 1 Zinc ribbon domain Rpr2 PF04032.16 gi|14521579|ref|NP_127055.1| - 0.00072 19.8 3.3 0.0082 16.4 3.3 2.2 1 1 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain A2L_zn_ribbon PF08792.10 gi|14521579|ref|NP_127055.1| - 0.0011 18.6 9.0 0.058 13.1 0.9 4.0 3 1 0 3 3 3 1 A2L zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|14521579|ref|NP_127055.1| - 0.0028 17.6 12.8 0.84 9.6 0.1 4.1 3 1 0 3 3 3 2 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|14521579|ref|NP_127055.1| - 0.0057 16.6 4.4 0.27 11.2 0.1 3.6 3 1 0 3 3 3 1 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 gi|14521579|ref|NP_127055.1| - 0.011 16.1 10.5 0.68 10.3 2.2 3.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar Auto_anti-p27 PF06677.12 gi|14521579|ref|NP_127055.1| - 0.012 15.8 3.5 0.012 15.8 3.5 2.8 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_13 PF09855.9 gi|14521579|ref|NP_127055.1| - 0.015 15.4 14.7 1.1 9.5 0.1 4.0 2 2 2 4 4 4 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TackOD1 PF18551.1 gi|14521579|ref|NP_127055.1| - 0.017 14.8 4.7 0.22 11.2 1.4 2.6 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zf-ribbon_3 PF13248.6 gi|14521579|ref|NP_127055.1| - 0.034 13.6 18.0 0.54 9.7 3.7 4.1 3 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|14521579|ref|NP_127055.1| - 0.055 14.2 8.7 0.62 10.8 2.7 3.0 2 1 0 2 2 2 0 zinc-ribbon family HypA PF01155.19 gi|14521579|ref|NP_127055.1| - 0.067 13.2 6.9 0.09 12.8 0.2 2.9 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|14521579|ref|NP_127055.1| - 0.09 12.5 12.2 5.4 6.8 0.0 3.7 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|14521579|ref|NP_127055.1| - 0.091 12.4 13.2 4.5 6.9 0.2 4.2 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger PriA_CRR PF18319.1 gi|14521579|ref|NP_127055.1| - 0.12 12.4 0.2 0.12 12.4 0.2 3.4 3 1 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain zinc_ribbon_10 PF10058.9 gi|14521579|ref|NP_127055.1| - 0.14 11.9 9.7 0.16 11.7 1.2 3.3 3 1 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein eIF-5_eIF-2B PF01873.17 gi|14521579|ref|NP_127055.1| - 0.14 12.0 3.4 0.6 10.0 0.1 2.2 2 0 0 2 2 2 0 Domain found in IF2B/IF5 zf-Mss51 PF13824.6 gi|14521579|ref|NP_127055.1| - 0.16 12.1 13.2 2.3 8.4 3.4 3.6 1 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Cys_rich_CPCC PF14206.6 gi|14521579|ref|NP_127055.1| - 0.21 11.4 7.6 0.3 10.9 0.2 3.0 3 0 0 3 3 3 0 Cysteine-rich CPCC Mu-like_Com PF10122.9 gi|14521579|ref|NP_127055.1| - 0.25 10.8 6.3 29 4.2 0.1 3.8 4 0 0 4 4 4 0 Mu-like prophage protein Com Terminase_GpA PF05876.12 gi|14521579|ref|NP_127055.1| - 0.26 9.8 6.2 0.097 11.2 1.8 2.0 1 1 0 2 2 2 0 Phage terminase large subunit (GpA) zf-tcix PF14952.6 gi|14521579|ref|NP_127055.1| - 0.27 10.9 12.5 1.9 8.2 0.2 4.0 4 0 0 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding zinc-ribbons_6 PF07191.12 gi|14521579|ref|NP_127055.1| - 0.41 10.7 6.1 1.8 8.6 0.2 2.5 2 1 0 2 2 2 0 zinc-ribbons C1_1 PF00130.22 gi|14521579|ref|NP_127055.1| - 0.41 10.6 8.3 0.46 10.4 0.7 2.6 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rubredoxin PF00301.20 gi|14521579|ref|NP_127055.1| - 0.46 10.5 14.0 4.6 7.4 0.1 4.2 4 0 0 4 4 4 0 Rubredoxin RPA_interact_C PF14768.6 gi|14521579|ref|NP_127055.1| - 0.48 11.0 4.5 42 4.8 0.0 2.8 1 1 0 2 2 2 0 Replication protein A interacting C-terminal FYVE_2 PF02318.16 gi|14521579|ref|NP_127055.1| - 0.55 10.4 3.8 2.9 8.1 0.2 2.4 1 1 1 2 2 2 0 FYVE-type zinc finger DUF35_N PF12172.8 gi|14521579|ref|NP_127055.1| - 0.66 9.9 11.4 17 5.4 0.1 4.1 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Prok-RING_1 PF14446.6 gi|14521579|ref|NP_127055.1| - 0.86 9.6 8.3 8.3 6.4 0.1 3.0 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf_C2H2_10 PF18414.1 gi|14521579|ref|NP_127055.1| - 1 9.0 15.9 1.3 8.6 0.8 3.9 4 0 0 4 4 4 0 C2H2 type zinc-finger zf-NADH-PPase PF09297.11 gi|14521579|ref|NP_127055.1| - 1 9.1 13.1 0.37 10.5 3.5 3.2 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37e PF01907.19 gi|14521579|ref|NP_127055.1| - 1 9.5 13.0 12 6.1 0.1 3.8 3 1 0 3 3 3 0 Ribosomal protein L37e Rubredoxin_2 PF18073.1 gi|14521579|ref|NP_127055.1| - 1.2 9.0 23.1 0.64 9.8 0.3 4.3 4 0 0 4 4 4 0 Rubredoxin metal binding domain zf-HIT PF04438.16 gi|14521579|ref|NP_127055.1| - 1.3 9.0 17.1 0.89 9.5 0.3 4.0 4 0 0 4 4 4 0 HIT zinc finger Nudix_N_2 PF14803.6 gi|14521579|ref|NP_127055.1| - 1.8 8.5 19.2 11 6.0 7.4 4.2 2 2 0 2 2 2 0 Nudix N-terminal zn-ribbon_14 PF16503.5 gi|14521579|ref|NP_127055.1| - 1.8 8.1 19.8 1.4 8.5 0.9 4.1 4 0 0 4 4 4 0 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|14521579|ref|NP_127055.1| - 2.6 8.0 13.7 12 6.0 2.7 3.4 3 1 0 3 3 3 0 SprT-like zinc ribbon domain zf-ACC PF17848.1 gi|14521579|ref|NP_127055.1| - 2.6 8.2 15.2 11 6.2 0.2 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain C1_2 PF03107.16 gi|14521579|ref|NP_127055.1| - 2.7 8.4 6.9 6.1 7.2 0.1 2.9 3 1 0 3 3 3 0 C1 domain NOB1_Zn_bind PF08772.11 gi|14521579|ref|NP_127055.1| - 3.3 7.9 10.4 4.8 7.4 0.7 3.4 3 1 1 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like zf-C4_Topoisom PF01396.19 gi|14521579|ref|NP_127055.1| - 4.4 7.2 16.0 0.79 9.6 2.3 3.0 2 2 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger YhfH PF14149.6 gi|14521579|ref|NP_127055.1| - 4.9 7.2 13.8 35 4.5 0.1 4.1 3 1 1 4 4 4 0 YhfH-like protein zf-RRN7 PF11781.8 gi|14521579|ref|NP_127055.1| - 5 6.9 14.4 7.5 6.3 1.1 4.1 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF1610 PF07754.11 gi|14521579|ref|NP_127055.1| - 9.8 6.3 12.6 8.5 6.4 0.6 3.5 4 0 0 4 4 3 0 Domain of unknown function (DUF1610) Translin PF01997.16 gi|14521580|ref|NP_127056.1| - 2.1e-15 57.2 0.6 1.1e-13 51.7 0.6 2.2 1 1 0 1 1 1 1 Translin family Zeta_toxin PF06414.12 gi|14521580|ref|NP_127056.1| - 0.025 13.9 0.0 0.61 9.3 0.0 2.4 2 1 0 2 2 2 0 Zeta toxin DUF1771 PF08590.10 gi|14521580|ref|NP_127056.1| - 0.043 14.2 0.4 0.077 13.4 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1771) VHL_C PF17211.3 gi|14521580|ref|NP_127056.1| - 0.097 12.7 0.6 0.58 10.2 0.0 2.3 2 0 0 2 2 2 0 VHL box domain PspA_IM30 PF04012.12 gi|14521580|ref|NP_127056.1| - 0.15 11.6 7.2 0.076 12.6 3.6 2.0 2 0 0 2 2 2 0 PspA/IM30 family DNA_topoisoIV PF00521.20 gi|14521580|ref|NP_127056.1| - 0.27 10.1 2.8 0.84 8.5 0.1 1.9 2 0 0 2 2 2 0 DNA gyrase/topoisomerase IV, subunit A FliS PF02561.14 gi|14521580|ref|NP_127056.1| - 0.33 11.2 5.2 0.17 12.2 0.7 2.7 2 2 1 3 3 3 0 Flagellar protein FliS Spc7 PF08317.11 gi|14521580|ref|NP_127056.1| - 2.3 7.0 8.1 0.32 9.9 3.0 1.8 2 0 0 2 2 2 0 Spc7 kinetochore protein Endonuclease_5 PF04493.14 gi|14521581|ref|NP_127057.1| - 3.5e-39 134.5 0.0 7.6e-33 113.9 0.0 2.0 1 1 1 2 2 2 2 Endonuclease V CTP-dep_RFKase PF01982.16 gi|14521582|ref|NP_127058.1| - 3.9e-38 130.3 0.0 5.9e-38 129.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_27 PF13463.6 gi|14521582|ref|NP_127058.1| - 1.4e-06 28.7 0.2 2.8e-06 27.7 0.2 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|14521582|ref|NP_127058.1| - 2.3e-06 27.5 0.2 4.2e-06 26.6 0.2 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|14521582|ref|NP_127058.1| - 2.6e-06 27.2 0.0 5.1e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|14521582|ref|NP_127058.1| - 3.1e-06 26.6 0.0 6.3e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|14521582|ref|NP_127058.1| - 2.2e-05 24.6 0.0 6.3e-05 23.1 0.0 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.12 gi|14521582|ref|NP_127058.1| - 3.3e-05 23.5 0.0 8.3e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 gi|14521582|ref|NP_127058.1| - 8.8e-05 22.4 0.1 0.00018 21.4 0.1 1.5 1 0 0 1 1 1 1 HTH domain LexA_DNA_bind PF01726.16 gi|14521582|ref|NP_127058.1| - 0.00023 20.9 0.3 0.065 13.0 0.1 3.1 3 0 0 3 3 3 1 LexA DNA binding domain HTH_23 PF13384.6 gi|14521582|ref|NP_127058.1| - 0.00025 20.7 0.0 0.00064 19.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain Rrf2 PF02082.20 gi|14521582|ref|NP_127058.1| - 0.00026 21.3 0.1 0.00043 20.6 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator DUF4364 PF14277.6 gi|14521582|ref|NP_127058.1| - 0.00032 20.5 0.1 0.00048 19.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) TrmB PF01978.19 gi|14521582|ref|NP_127058.1| - 0.00058 19.7 0.1 0.001 18.9 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|14521582|ref|NP_127058.1| - 0.0007 19.5 0.1 0.0012 18.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_28 PF13518.6 gi|14521582|ref|NP_127058.1| - 0.00082 19.4 0.0 0.0017 18.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521582|ref|NP_127058.1| - 0.0015 18.3 0.0 0.003 17.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|14521582|ref|NP_127058.1| - 0.0015 18.4 0.7 0.0028 17.5 0.2 1.7 2 0 0 2 2 1 1 MarR family HTH_20 PF12840.7 gi|14521582|ref|NP_127058.1| - 0.0028 17.7 0.1 0.0057 16.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|14521582|ref|NP_127058.1| - 0.0032 17.1 0.1 0.0071 16.0 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 gi|14521582|ref|NP_127058.1| - 0.0067 16.4 0.0 0.014 15.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|14521582|ref|NP_127058.1| - 0.0088 16.0 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_IclR PF09339.10 gi|14521582|ref|NP_127058.1| - 0.024 14.4 0.0 0.047 13.5 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain RP-C PF03428.13 gi|14521582|ref|NP_127058.1| - 0.025 14.2 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_34 PF13601.6 gi|14521582|ref|NP_127058.1| - 0.027 14.7 0.2 0.16 12.1 0.2 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain PadR PF03551.14 gi|14521582|ref|NP_127058.1| - 0.036 14.0 0.3 0.059 13.3 0.3 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_AsnC-type PF13404.6 gi|14521582|ref|NP_127058.1| - 0.039 13.8 0.0 0.072 12.9 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain LZ_Tnp_IS481 PF13011.6 gi|14521582|ref|NP_127058.1| - 0.04 14.5 0.0 0.23 12.0 0.0 1.9 2 0 0 2 2 2 0 leucine-zipper of insertion element IS481 FeoC PF09012.10 gi|14521582|ref|NP_127058.1| - 0.04 14.0 0.1 0.065 13.3 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_Tnp_1_2 PF13022.6 gi|14521582|ref|NP_127058.1| - 0.045 13.9 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase MazE_antitoxin PF04014.18 gi|14521582|ref|NP_127058.1| - 0.053 13.5 2.5 0.45 10.5 0.1 3.0 3 0 0 3 3 3 0 Antidote-toxin recognition MazE, bacterial antitoxin MerR PF00376.23 gi|14521582|ref|NP_127058.1| - 0.081 12.7 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 MerR family regulatory protein HTH_12 PF08461.10 gi|14521582|ref|NP_127058.1| - 0.086 12.8 0.4 0.16 12.0 0.4 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_Tnp_ISL3 PF13542.6 gi|14521582|ref|NP_127058.1| - 0.095 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_38 PF13936.6 gi|14521582|ref|NP_127058.1| - 0.11 12.3 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Replic_Relax PF13814.6 gi|14521582|ref|NP_127058.1| - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Replication-relaxation TnsD PF15978.5 gi|14521582|ref|NP_127058.1| - 0.21 10.5 0.0 0.27 10.2 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D RPA_C PF08784.11 gi|14521582|ref|NP_127058.1| - 0.24 12.1 0.0 0.39 11.4 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal DUF3368 PF11848.8 gi|14521582|ref|NP_127058.1| - 0.26 11.1 1.4 21 5.0 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) tRNA-synt_2d PF01409.20 gi|14521583|ref|NP_127059.1| - 4.6e-83 278.5 0.0 5.9e-83 278.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|14521583|ref|NP_127059.1| - 1.8e-05 24.3 0.0 0.016 14.6 0.0 2.3 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|14521583|ref|NP_127059.1| - 6.4e-05 22.2 0.0 0.035 13.2 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) MarR PF01047.22 gi|14521583|ref|NP_127059.1| - 0.00025 20.9 3.0 0.0034 17.3 0.3 3.6 4 0 0 4 4 4 1 MarR family TrmB PF01978.19 gi|14521583|ref|NP_127059.1| - 0.00033 20.5 3.1 0.022 14.7 0.7 3.4 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|14521583|ref|NP_127059.1| - 0.00056 20.3 8.9 0.00085 19.8 0.5 4.1 4 1 0 4 4 4 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|14521583|ref|NP_127059.1| - 0.0013 18.6 0.3 0.013 15.4 0.1 2.8 3 0 0 3 3 3 1 MarR family HTH_45 PF14947.6 gi|14521583|ref|NP_127059.1| - 0.0048 16.8 4.2 1.5 8.8 0.2 3.6 3 1 0 3 3 3 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|14521583|ref|NP_127059.1| - 0.014 15.2 2.3 0.29 10.9 0.2 2.9 1 1 1 3 3 3 0 Domain of unknown function (DUF4364) HTH_5 PF01022.20 gi|14521583|ref|NP_127059.1| - 0.021 14.7 1.7 7.1 6.6 0.2 3.6 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|14521583|ref|NP_127059.1| - 0.021 14.7 11.4 0.021 14.7 6.4 2.6 2 0 0 2 2 2 0 TFIIE alpha subunit DUF2582 PF10771.9 gi|14521583|ref|NP_127059.1| - 0.025 14.7 4.1 1.1 9.5 0.3 3.4 3 0 0 3 3 3 0 Winged helix-turn-helix domain (DUF2582) Lipoprotein_9 PF03180.14 gi|14521583|ref|NP_127059.1| - 0.068 12.3 0.2 0.13 11.4 0.2 1.4 1 0 0 1 1 1 0 NLPA lipoprotein HTH_29 PF13551.6 gi|14521583|ref|NP_127059.1| - 0.072 13.1 0.1 0.37 10.8 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix HTH_36 PF13730.6 gi|14521583|ref|NP_127059.1| - 0.15 12.0 0.3 0.65 10.0 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DprA_WH PF17782.1 gi|14521583|ref|NP_127059.1| - 0.22 11.6 0.6 1.2 9.4 0.4 2.2 2 0 0 2 2 2 0 DprA winged helix domain HTH_24 PF13412.6 gi|14521583|ref|NP_127059.1| - 0.39 10.3 4.3 6.4 6.4 0.3 3.6 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|14521583|ref|NP_127059.1| - 0.81 10.1 5.5 0.94 9.9 0.6 3.3 5 0 0 5 5 4 0 Transcriptional regulator tRNA_synthFbeta PF17759.1 gi|14521584|ref|NP_127060.1| - 6.9e-49 166.2 0.1 1.3e-48 165.3 0.1 1.5 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B3_4 PF03483.17 gi|14521584|ref|NP_127060.1| - 2.3e-16 60.0 0.0 3.9e-16 59.2 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain B5 PF03484.15 gi|14521584|ref|NP_127060.1| - 8.8e-14 51.6 2.9 3.7e-13 49.6 0.4 3.0 4 0 0 4 4 4 1 tRNA synthetase B5 domain PhetRS_B1 PF18262.1 gi|14521584|ref|NP_127060.1| - 2.7e-09 37.1 0.7 5.6e-07 29.7 0.0 4.0 4 0 0 4 4 4 1 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|14521584|ref|NP_127060.1| - 0.00014 21.4 0.1 0.0011 18.5 0.1 2.5 1 1 0 1 1 1 1 tRNA synthetases class II core domain (F) RsbU_N PF08673.10 gi|14521584|ref|NP_127060.1| - 0.15 12.2 0.5 8.5 6.6 0.0 2.9 2 0 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain DUF234 PF03008.14 gi|14521585|ref|NP_127061.1| - 1.7e-27 95.8 0.3 3.4e-27 94.8 0.3 1.5 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function ATPase_2 PF01637.18 gi|14521585|ref|NP_127061.1| - 3.2e-21 76.3 0.3 1.5e-19 70.9 0.3 2.9 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521585|ref|NP_127061.1| - 1.9e-09 37.6 0.0 3.7e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain TrmB PF01978.19 gi|14521585|ref|NP_127061.1| - 2.4e-06 27.3 0.0 6e-06 26.1 0.0 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB AAA_16 PF13191.6 gi|14521585|ref|NP_127061.1| - 7.6e-06 26.4 0.1 0.0001 22.7 0.1 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521585|ref|NP_127061.1| - 2.2e-05 24.8 0.0 4.5e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain HTH_45 PF14947.6 gi|14521585|ref|NP_127061.1| - 0.0039 17.1 0.0 0.009 16.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_IclR PF09339.10 gi|14521585|ref|NP_127061.1| - 0.009 15.8 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain AAA_24 PF13479.6 gi|14521585|ref|NP_127061.1| - 0.022 14.5 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain UPF0102 PF02021.17 gi|14521585|ref|NP_127061.1| - 0.06 13.6 0.1 0.14 12.4 0.1 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 AAA_25 PF13481.6 gi|14521585|ref|NP_127061.1| - 0.14 11.7 0.1 0.72 9.4 0.0 2.2 2 1 0 2 2 2 0 AAA domain ADH_N PF08240.12 gi|14521586|ref|NP_127062.1| - 8.9e-38 128.5 3.1 1.3e-37 128.0 3.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|14521586|ref|NP_127062.1| - 2.9e-31 108.1 0.0 5.7e-31 107.2 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|14521586|ref|NP_127062.1| - 3e-13 49.8 0.0 4.5e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|14521586|ref|NP_127062.1| - 6.1e-09 37.0 0.0 1.1e-08 36.2 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N_2 PF16884.5 gi|14521586|ref|NP_127062.1| - 0.023 14.6 0.0 0.054 13.4 0.0 1.6 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase T2SSF PF00482.23 gi|14521587|ref|NP_127063.1| - 6.5e-16 58.4 1.7 6.5e-16 58.4 1.7 2.8 3 1 1 4 4 4 1 Type II secretion system (T2SS), protein F T2SSF PF00482.23 gi|14521588|ref|NP_127064.1| - 9.3e-22 77.3 1.9 9.3e-22 77.3 1.9 2.9 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F Spore_III_AB PF09548.10 gi|14521588|ref|NP_127064.1| - 0.00038 20.6 0.1 0.00038 20.6 0.1 2.5 2 1 0 2 2 2 1 Stage III sporulation protein AB (spore_III_AB) DUF2207 PF09972.9 gi|14521588|ref|NP_127064.1| - 0.0086 14.9 5.7 0.21 10.3 0.1 2.1 2 0 0 2 2 2 2 Predicted membrane protein (DUF2207) DUF3473 PF11959.8 gi|14521588|ref|NP_127064.1| - 0.012 15.7 0.2 0.025 14.6 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3473) T2SSE PF00437.20 gi|14521589|ref|NP_127065.1| - 2e-58 197.6 0.0 4.4e-55 186.7 0.0 2.5 2 0 0 2 2 2 2 Type II/IV secretion system protein Intein_splicing PF14890.6 gi|14521589|ref|NP_127065.1| - 9.2e-21 74.2 0.5 3.5e-20 72.3 0.2 2.1 2 0 0 2 2 2 1 Intein splicing domain FtsK_SpoIIIE PF01580.18 gi|14521589|ref|NP_127065.1| - 0.00016 21.1 0.7 0.00038 19.9 0.3 1.8 2 0 0 2 2 2 1 FtsK/SpoIIIE family Zeta_toxin PF06414.12 gi|14521589|ref|NP_127065.1| - 0.0033 16.7 0.0 0.0073 15.6 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_29 PF13555.6 gi|14521589|ref|NP_127065.1| - 0.036 13.8 0.1 0.074 12.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|14521589|ref|NP_127065.1| - 0.042 14.4 0.0 0.11 13.1 0.0 1.6 1 0 0 1 1 1 0 ABC transporter SRP54 PF00448.22 gi|14521589|ref|NP_127065.1| - 0.081 12.5 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_24 PF13479.6 gi|14521589|ref|NP_127065.1| - 0.091 12.5 0.1 0.26 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|14521589|ref|NP_127065.1| - 0.093 13.1 0.1 0.22 11.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|14521589|ref|NP_127065.1| - 0.11 12.9 0.0 0.35 11.2 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain Hint PF01079.20 gi|14521589|ref|NP_127065.1| - 0.21 11.1 0.0 0.36 10.3 0.0 1.3 1 0 0 1 1 1 0 Hint module DUF515 PF04415.12 gi|14521591|ref|NP_127067.1| - 6.3e-162 539.0 19.7 8e-162 538.7 19.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF515) RcpC PF16976.5 gi|14521591|ref|NP_127067.1| - 0.018 15.1 2.4 0.018 15.1 2.4 2.3 2 1 0 2 2 2 0 Flp pilus assembly protein RcpC/CpaB Sugar_transport PF06800.12 gi|14521591|ref|NP_127067.1| - 0.027 13.8 0.0 0.052 12.9 0.0 1.4 1 0 0 1 1 1 0 Sugar transport protein SSP160 PF06933.11 gi|14521591|ref|NP_127067.1| - 0.13 10.4 21.6 0.013 13.8 15.8 1.8 2 0 0 2 2 2 0 Special lobe-specific silk protein SSP160 Ribosomal_L27A PF00828.19 gi|14521591|ref|NP_127067.1| - 1.2 9.8 4.4 2.7 8.7 0.7 2.7 3 0 0 3 3 3 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Plk4_PB2 PF18409.1 gi|14521591|ref|NP_127067.1| - 1.7 9.4 5.5 1.7 9.4 0.3 2.9 2 0 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 Shisa PF13908.6 gi|14521591|ref|NP_127067.1| - 4.2 7.6 9.8 26 5.0 7.0 2.3 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator FlgH PF02107.16 gi|14521591|ref|NP_127067.1| - 6.7 6.3 11.4 0.63 9.6 6.2 1.8 2 0 0 2 2 2 0 Flagellar L-ring protein G_path_suppress PF15991.5 gi|14521591|ref|NP_127067.1| - 8.5 6.4 15.4 5.3 7.1 6.2 2.4 2 0 0 2 2 2 0 G-protein pathway suppressor MMR_HSR1 PF01926.23 gi|14521593|ref|NP_127069.1| - 2.3e-16 59.9 0.3 7.8e-13 48.5 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|14521593|ref|NP_127069.1| - 7.4e-13 48.3 0.2 3.9e-06 26.5 0.0 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|14521593|ref|NP_127069.1| - 2.1e-11 44.0 0.0 4.1e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase Dynamin_N PF00350.23 gi|14521593|ref|NP_127069.1| - 6.8e-06 26.2 2.6 0.085 12.9 0.0 3.7 3 1 0 4 4 4 2 Dynamin family GTP_EFTU PF00009.27 gi|14521593|ref|NP_127069.1| - 3.9e-05 23.3 0.7 0.0018 17.8 0.1 3.4 3 1 1 4 4 4 1 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|14521593|ref|NP_127069.1| - 0.00011 21.6 1.8 0.028 13.9 0.1 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 gi|14521593|ref|NP_127069.1| - 0.033 14.2 0.0 0.069 13.2 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain cobW PF02492.19 gi|14521593|ref|NP_127069.1| - 0.042 13.4 0.7 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain IIGP PF05049.13 gi|14521593|ref|NP_127069.1| - 0.047 12.8 0.0 0.079 12.0 0.0 1.3 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) Spt4 PF06093.13 gi|14521593|ref|NP_127069.1| - 0.058 13.5 0.1 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger HetR_C PF18460.1 gi|14521593|ref|NP_127069.1| - 0.096 12.6 0.2 4 7.4 0.0 2.7 2 0 0 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain UPF0020 PF01170.18 gi|14521594|ref|NP_127070.1| - 6.8e-39 133.6 0.0 1.1e-37 129.7 0.0 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|14521594|ref|NP_127070.1| - 1.9e-36 125.3 7.0 3.1e-36 124.6 7.0 1.3 1 0 0 1 1 1 1 THUMP domain Methyltransf_31 PF13847.6 gi|14521594|ref|NP_127070.1| - 2.3e-08 34.0 0.0 5.3e-08 32.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521594|ref|NP_127070.1| - 1.4e-07 32.1 0.0 9.7e-07 29.4 0.0 2.3 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521594|ref|NP_127070.1| - 3.3e-06 26.8 0.0 5.2e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|14521594|ref|NP_127070.1| - 3.5e-05 23.5 0.0 7e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 gi|14521594|ref|NP_127070.1| - 4.6e-05 24.0 0.0 0.00017 22.1 0.0 2.1 2 1 0 2 2 1 1 Methyltransferase domain MTS PF05175.14 gi|14521594|ref|NP_127070.1| - 0.00027 20.5 0.0 0.00042 19.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|14521594|ref|NP_127070.1| - 0.00074 18.9 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 gi|14521594|ref|NP_127070.1| - 0.00076 19.4 0.0 0.0043 17.0 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|14521594|ref|NP_127070.1| - 0.013 15.2 0.0 0.076 12.7 0.0 2.1 2 0 0 2 2 2 0 DNA methylase Methyltransf_4 PF02390.17 gi|14521594|ref|NP_127070.1| - 0.072 12.6 0.0 0.65 9.4 0.0 2.1 1 1 0 1 1 1 0 Putative methyltransferase AviRa PF11599.8 gi|14521594|ref|NP_127070.1| - 0.085 12.3 0.0 0.34 10.3 0.0 1.9 2 0 0 2 2 2 0 RRNA methyltransferase AviRa Methyltransf_3 PF01596.17 gi|14521594|ref|NP_127070.1| - 0.089 12.0 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_30 PF05430.11 gi|14521594|ref|NP_127070.1| - 0.12 12.2 0.0 0.31 10.9 0.0 1.6 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase OrfB_Zn_ribbon PF07282.11 gi|14521595|ref|NP_127071.1| - 5.4e-20 71.1 0.0 1e-19 70.2 0.0 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|14521595|ref|NP_127071.1| - 0.019 14.4 2.1 0.29 10.6 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain ExoD PF06055.12 gi|14521595|ref|NP_127071.1| - 0.059 12.7 0.1 26 4.2 0.0 3.0 2 1 0 3 3 3 0 Exopolysaccharide synthesis, ExoD Suv3_N PF18114.1 gi|14521595|ref|NP_127071.1| - 0.19 11.8 0.4 2.2 8.4 0.2 2.2 1 1 1 2 2 2 0 Suv3 helical N-terminal domain DNA_ligase_ZBD PF03119.16 gi|14521595|ref|NP_127071.1| - 0.34 11.0 2.4 16 5.6 0.4 2.6 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain FAA_hydrolase PF01557.18 gi|14521596|ref|NP_127072.1| - 6.8e-71 238.4 0.0 7.7e-71 238.2 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family MFS_1 PF07690.16 gi|14521597|ref|NP_127073.1| - 1.5e-12 47.1 26.4 1.5e-12 47.1 26.4 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily CN_hydrolase PF00795.22 gi|14521598|ref|NP_127074.1| - 1.2e-62 211.6 0.0 1.5e-62 211.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DNA_binding_1 PF01035.20 gi|14521598|ref|NP_127074.1| - 0.11 12.6 0.0 0.52 10.5 0.0 2.0 2 0 0 2 2 2 0 6-O-methylguanine DNA methyltransferase, DNA binding domain Metallophos PF00149.28 gi|14521599|ref|NP_127075.1| - 3.3e-10 40.8 0.9 7.3e-10 39.7 0.9 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|14521599|ref|NP_127075.1| - 1.5e-07 31.7 0.0 2.1e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain YmdB PF13277.6 gi|14521599|ref|NP_127075.1| - 0.14 11.5 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 YmdB-like protein PHO4 PF01384.20 gi|14521600|ref|NP_127076.1| - 5.1e-113 377.5 32.9 6.1e-113 377.3 32.9 1.1 1 0 0 1 1 1 1 Phosphate transporter family HTH_IclR PF09339.10 gi|14521600|ref|NP_127076.1| - 0.15 11.8 0.0 12 5.7 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain Ytca PF17090.5 gi|14521600|ref|NP_127076.1| - 0.16 12.5 4.1 0.61 10.6 0.0 3.6 3 0 0 3 3 3 0 Uncharacterised protein family PhoU_div PF01865.16 gi|14521601|ref|NP_127077.1| - 4.9e-45 153.5 9.0 5.4e-45 153.3 9.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|14521601|ref|NP_127077.1| - 8.3e-09 35.8 10.1 0.00023 21.5 2.7 2.6 2 1 0 2 2 2 2 PhoU domain DUF241 PF03087.14 gi|14521601|ref|NP_127077.1| - 0.021 14.7 2.2 3.4 7.5 0.1 2.2 2 0 0 2 2 2 0 Arabidopsis protein of unknown function Cob_adeno_trans PF01923.18 gi|14521601|ref|NP_127077.1| - 0.028 14.5 0.3 0.49 10.5 0.0 2.2 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Imm7 PF15585.6 gi|14521601|ref|NP_127077.1| - 0.038 14.3 0.8 0.16 12.2 0.0 2.2 2 1 0 2 2 2 0 Immunity protein 7 HSBP1 PF06825.12 gi|14521601|ref|NP_127077.1| - 0.079 12.8 3.3 0.89 9.5 0.3 2.9 2 0 0 2 2 2 0 Heat shock factor binding protein 1 UPF0184 PF03670.13 gi|14521601|ref|NP_127077.1| - 0.3 11.5 1.5 26 5.3 0.1 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) NPV_P10 PF05531.12 gi|14521601|ref|NP_127077.1| - 0.36 11.3 3.2 16 6.0 0.1 3.2 2 2 0 2 2 2 0 Nucleopolyhedrovirus P10 protein XhlA PF10779.9 gi|14521601|ref|NP_127077.1| - 8.8 6.6 10.0 16 5.8 1.1 3.8 3 1 0 3 3 3 0 Haemolysin XhlA Spindle_Spc25 PF08234.12 gi|14521602|ref|NP_127078.1| - 0.0035 17.5 0.1 0.037 14.2 0.0 2.2 2 0 0 2 2 2 1 Chromosome segregation protein Spc25 DUF2393 PF09624.10 gi|14521602|ref|NP_127078.1| - 0.0095 15.9 2.1 0.017 15.2 2.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2393) Pox_RNA_pol PF03293.14 gi|14521602|ref|NP_127078.1| - 0.057 13.1 0.2 0.1 12.3 0.2 1.4 1 1 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit DUF1307 PF06998.11 gi|14521602|ref|NP_127078.1| - 0.21 11.6 1.9 0.44 10.6 0.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1307) DUF3139 PF11337.8 gi|14521602|ref|NP_127078.1| - 0.42 11.3 3.2 2.2 9.0 2.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Big_1 PF02369.16 gi|14521602|ref|NP_127078.1| - 2 8.5 5.3 18 5.4 0.1 2.3 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 1) AsnC_trans_reg PF01037.21 gi|14521603|ref|NP_127079.1| - 3.7e-19 68.4 0.3 4.1e-19 68.3 0.3 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Spore_YhcN_YlaJ PF09580.10 gi|14521603|ref|NP_127079.1| - 0.001 19.1 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) NapD PF03927.13 gi|14521603|ref|NP_127079.1| - 0.0072 16.4 0.2 0.0082 16.2 0.2 1.1 1 0 0 1 1 1 1 NapD protein HMA PF00403.26 gi|14521603|ref|NP_127079.1| - 0.018 15.5 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Heavy-metal-associated domain GYD PF08734.11 gi|14521603|ref|NP_127079.1| - 0.043 13.8 0.9 0.1 12.5 0.7 1.9 1 1 1 2 2 2 0 GYD domain DUF5395 PF17373.2 gi|14521603|ref|NP_127079.1| - 0.058 14.1 0.0 0.073 13.7 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5395) tRNA-synt_1e PF01406.19 gi|14521604|ref|NP_127080.1| - 4e-139 463.1 0.2 9.7e-139 461.9 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|14521604|ref|NP_127080.1| - 1e-20 73.9 0.5 1.6e-10 40.4 0.1 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|14521604|ref|NP_127080.1| - 5.9e-16 58.7 2.1 1e-15 57.9 0.3 2.2 2 0 0 2 2 2 1 DALR domain tRNA-synt_1f PF01921.18 gi|14521604|ref|NP_127080.1| - 9.3e-09 34.7 0.3 1.2e-05 24.5 0.0 2.6 2 1 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|14521604|ref|NP_127080.1| - 1.6e-08 33.3 0.7 5.7e-06 24.9 0.0 3.0 4 0 0 4 4 4 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|14521604|ref|NP_127080.1| - 0.0099 14.8 0.3 0.05 12.5 0.3 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain EntA_Immun PF08951.10 gi|14521604|ref|NP_127080.1| - 0.21 12.0 4.4 0.46 10.9 0.2 3.0 3 0 0 3 3 3 0 Enterocin A Immunity Radical_SAM PF04055.21 gi|14521605|ref|NP_127081.1| - 1.8e-14 54.4 0.0 2.2e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|14521605|ref|NP_127081.1| - 1.3e-07 32.0 0.0 1.9e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|14521605|ref|NP_127081.1| - 1.6e-07 31.5 0.0 2.8e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain NifU PF01106.17 gi|14521605|ref|NP_127081.1| - 0.058 13.6 0.1 21 5.4 0.0 2.6 3 0 0 3 3 3 0 NifU-like domain PTPS PF01242.19 gi|14521606|ref|NP_127082.1| - 1.5e-26 92.7 0.2 1.8e-26 92.5 0.2 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Ribosomal_L16 PF00252.18 gi|14521607|ref|NP_127083.1| - 1.6e-31 109.1 0.2 2e-31 108.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Zip PF02535.22 gi|14521608|ref|NP_127084.1| - 2.6e-21 76.2 27.1 5.5e-19 68.6 9.9 2.7 1 1 2 3 3 3 3 ZIP Zinc transporter FeS_assembly_P PF01883.19 gi|14521609|ref|NP_127085.1| - 6.1e-06 26.3 0.1 9e-06 25.8 0.1 1.5 1 1 0 1 1 1 1 Iron-sulfur cluster assembly protein NUMOD1 PF07453.13 gi|14521609|ref|NP_127085.1| - 0.13 12.5 0.0 0.43 10.9 0.0 1.8 2 0 0 2 2 2 0 NUMOD1 domain PK PF00224.21 gi|161723319|ref|NP_127086.2| - 8.7e-118 393.2 6.7 1.1e-117 392.8 6.7 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|161723319|ref|NP_127086.2| - 2.6e-22 79.3 0.0 4.8e-21 75.2 0.0 2.8 3 0 0 3 3 3 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|161723319|ref|NP_127086.2| - 0.00089 18.5 0.4 0.0024 17.1 0.1 1.8 2 1 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family IMPDH PF00478.25 gi|161723319|ref|NP_127086.2| - 0.0011 18.0 0.4 0.0044 16.1 0.1 2.0 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain DUF1847 PF08901.11 gi|161723319|ref|NP_127086.2| - 0.18 11.4 0.1 0.82 9.3 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1847) Pyr_redox_2 PF07992.14 gi|14521611|ref|NP_127087.1| - 2.8e-60 204.0 1.8 3.4e-60 203.8 1.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14521611|ref|NP_127087.1| - 1.8e-24 86.1 7.4 4.1e-19 68.9 2.6 3.6 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|14521611|ref|NP_127087.1| - 4.4e-20 72.2 3.0 3.1e-17 62.8 0.3 2.6 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|14521611|ref|NP_127087.1| - 1e-18 67.6 0.3 1.1e-17 64.2 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.24 gi|14521611|ref|NP_127087.1| - 5e-11 42.8 5.6 0.12 11.9 0.7 4.1 4 0 0 4 4 4 4 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|14521611|ref|NP_127087.1| - 4.1e-09 35.7 4.9 0.0031 16.3 0.0 4.1 3 1 1 4 4 4 3 HI0933-like protein FAD_binding_2 PF00890.24 gi|14521611|ref|NP_127087.1| - 2e-07 30.4 1.9 0.011 14.9 0.0 3.4 3 0 0 3 3 3 3 FAD binding domain Lycopene_cycl PF05834.12 gi|14521611|ref|NP_127087.1| - 2.4e-07 30.1 0.4 0.011 14.8 0.0 2.5 2 1 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|14521611|ref|NP_127087.1| - 4e-07 30.2 0.1 0.0022 18.2 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|14521611|ref|NP_127087.1| - 1.9e-06 28.3 2.2 0.0011 19.4 0.8 2.5 2 1 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_9 PF13454.6 gi|14521611|ref|NP_127087.1| - 4.8e-06 26.6 3.0 0.68 9.9 0.0 4.0 3 1 1 4 4 4 2 FAD-NAD(P)-binding GIDA PF01134.22 gi|14521611|ref|NP_127087.1| - 7e-06 25.4 9.6 0.1 11.7 0.3 3.6 2 1 1 3 3 3 3 Glucose inhibited division protein A Thi4 PF01946.17 gi|14521611|ref|NP_127087.1| - 2.9e-05 23.4 1.0 0.039 13.2 0.0 2.9 4 0 0 4 4 4 2 Thi4 family 3HCDH_N PF02737.18 gi|14521611|ref|NP_127087.1| - 0.00011 22.1 1.8 0.00014 21.8 0.3 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 gi|14521611|ref|NP_127087.1| - 0.00033 19.9 0.1 0.03 13.4 0.0 2.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|14521611|ref|NP_127087.1| - 0.00051 19.4 2.1 0.048 12.9 0.1 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|14521611|ref|NP_127087.1| - 0.00052 20.3 3.9 0.7 10.2 2.3 3.3 2 1 0 2 2 2 1 TrkA-N domain Amino_oxidase PF01593.24 gi|14521611|ref|NP_127087.1| - 0.0014 18.0 0.0 3.7 6.7 0.0 2.8 1 1 1 3 3 3 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|14521611|ref|NP_127087.1| - 0.0028 17.0 4.7 0.22 10.7 0.3 2.8 3 0 0 3 3 3 2 FAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|14521611|ref|NP_127087.1| - 0.0049 16.5 0.4 0.0092 15.6 0.4 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Trp_halogenase PF04820.14 gi|14521611|ref|NP_127087.1| - 0.0078 15.1 6.9 0.062 12.2 0.1 3.1 2 1 1 3 3 3 1 Tryptophan halogenase Mqo PF06039.15 gi|14521611|ref|NP_127087.1| - 0.033 12.8 0.0 0.068 11.7 0.0 1.5 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) ApbA PF02558.16 gi|14521611|ref|NP_127087.1| - 0.033 13.8 0.7 0.066 12.9 0.1 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|14521611|ref|NP_127087.1| - 0.1 12.6 0.1 0.83 9.6 0.0 2.4 3 0 0 3 3 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_oxidored PF12831.7 gi|14521611|ref|NP_127087.1| - 0.12 11.7 8.1 2.5 7.4 0.1 3.1 2 1 1 3 3 3 0 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|14521611|ref|NP_127087.1| - 0.12 13.0 1.3 1.6 9.4 0.5 2.8 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|14521611|ref|NP_127087.1| - 0.12 11.7 0.7 10 5.4 0.1 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain tRNA_SAD PF07973.14 gi|14521612|ref|NP_127088.1| - 3.8e-06 26.9 0.4 9.9e-06 25.6 0.1 1.8 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain MatE PF01554.18 gi|14521613|ref|NP_127089.1| - 3.3e-57 192.6 31.0 1.6e-32 112.4 11.5 3.3 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|14521613|ref|NP_127089.1| - 1.4e-10 41.4 11.2 1.4e-10 41.4 11.2 4.4 3 3 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|14521613|ref|NP_127089.1| - 3e-08 32.7 3.9 3e-08 32.7 3.9 2.9 2 2 0 3 3 3 1 Lipid II flippase MurJ MatE PF01554.18 gi|14521614|ref|NP_127090.1| - 7.9e-56 188.2 23.4 1.3e-29 102.9 9.3 2.8 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|14521614|ref|NP_127090.1| - 4.4e-08 33.3 10.9 4.4e-08 33.3 10.9 3.8 2 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain cobW PF02492.19 gi|14521615|ref|NP_127091.1| - 7.5e-06 25.7 0.0 1.6e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain PTS_IIB PF02302.17 gi|14521615|ref|NP_127091.1| - 0.0002 22.0 1.8 4.9 7.9 0.0 4.3 3 1 1 4 4 4 2 PTS system, Lactose/Cellobiose specific IIB subunit B12-binding PF02310.19 gi|14521615|ref|NP_127091.1| - 0.0028 17.7 1.3 5.6 7.0 0.0 3.9 6 0 0 6 6 5 2 B12 binding domain UPF0180 PF03698.13 gi|14521615|ref|NP_127091.1| - 0.016 15.4 0.2 21 5.4 0.0 4.2 4 1 1 5 5 5 0 Uncharacterised protein family (UPF0180) DUF2325 PF10087.9 gi|14521615|ref|NP_127091.1| - 0.022 14.9 1.8 3.4 7.8 0.0 4.1 5 0 0 5 5 5 0 Uncharacterized protein conserved in bacteria (DUF2325) CbiA PF01656.23 gi|14521615|ref|NP_127091.1| - 0.023 14.7 1.1 0.11 12.5 0.4 2.3 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain GTP-bdg_N PF13167.6 gi|14521615|ref|NP_127091.1| - 0.025 15.2 0.5 1.2 9.8 0.0 3.3 4 0 0 4 4 3 0 GTP-binding GTPase N-terminal PPK2 PF03976.14 gi|14521615|ref|NP_127091.1| - 0.032 13.7 1.7 0.12 11.9 0.1 2.6 3 1 0 3 3 3 0 Polyphosphate kinase 2 (PPK2) Zeta_toxin PF06414.12 gi|14521615|ref|NP_127091.1| - 0.098 11.9 0.4 0.22 10.8 0.1 1.7 2 0 0 2 2 2 0 Zeta toxin MipZ PF09140.11 gi|14521615|ref|NP_127091.1| - 0.098 11.9 0.0 0.26 10.5 0.0 1.7 2 0 0 2 2 2 0 ATPase MipZ LytR_C PF13399.6 gi|14521615|ref|NP_127091.1| - 0.1 13.6 0.0 0.34 11.9 0.0 1.9 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator Apis_Csd PF11671.8 gi|14521615|ref|NP_127091.1| - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Complementary sex determiner protein SWI2_SNF2 PF18766.1 gi|14521615|ref|NP_127091.1| - 0.14 11.8 0.0 0.45 10.1 0.0 1.9 2 0 0 2 2 2 0 SWI2/SNF2 ATPase Oxidored_nitro PF00148.19 gi|14521615|ref|NP_127091.1| - 0.17 10.6 0.5 3.5 6.3 0.0 2.9 3 1 0 3 3 3 0 Nitrogenase component 1 type Oxidoreductase AAA_31 PF13614.6 gi|14521615|ref|NP_127091.1| - 0.18 11.7 2.6 0.61 10.0 0.1 2.6 3 0 0 3 3 2 0 AAA domain DUF523 PF04463.12 gi|14521616|ref|NP_127092.1| - 6.3e-06 26.3 0.0 9.3e-06 25.7 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF523) NBD94 PF16830.5 gi|14521617|ref|NP_127093.1| - 0.057 13.8 2.8 0.49 10.8 1.8 2.8 1 1 2 3 3 3 0 Nucleotide-Binding Domain 94 of RH Nup96 PF12110.8 gi|14521617|ref|NP_127093.1| - 0.092 11.8 0.0 11 5.0 0.0 2.2 2 0 0 2 2 2 0 Nuclear protein 96 ANAPC3 PF12895.7 gi|14521617|ref|NP_127093.1| - 0.1 12.9 0.0 4.2 7.7 0.0 3.1 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 UPF0047 PF01894.17 gi|14521618|ref|NP_127094.1| - 4.7e-43 146.0 0.0 5.4e-43 145.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 ThiS PF02597.20 gi|33356787|ref|NP_127095.2| - 9.1e-23 80.7 0.0 1e-22 80.5 0.0 1.0 1 0 0 1 1 1 1 ThiS family TGS PF02824.21 gi|33356787|ref|NP_127095.2| - 0.0012 18.9 0.2 0.28 11.3 0.1 2.1 2 0 0 2 2 2 2 TGS domain Ub-Mut7C PF14451.6 gi|33356787|ref|NP_127095.2| - 0.01 15.7 0.1 0.36 10.7 0.0 2.2 2 0 0 2 2 2 0 Mut7-C ubiquitin Lambda_tail_I PF06805.12 gi|33356787|ref|NP_127095.2| - 0.013 15.9 0.0 0.034 14.5 0.0 1.9 1 1 0 1 1 1 0 Bacteriophage lambda tail assembly protein I ThiS-like PF14453.6 gi|33356787|ref|NP_127095.2| - 0.015 15.3 0.6 0.26 11.3 0.6 2.1 1 1 0 1 1 1 0 ThiS-like ubiquitin Ub-RnfH PF03658.14 gi|33356787|ref|NP_127095.2| - 0.068 13.6 0.0 0.088 13.2 0.0 1.3 1 1 0 1 1 1 0 RnfH family Ubiquitin BCDHK_Adom3 PF10436.9 gi|33356787|ref|NP_127095.2| - 0.15 11.9 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase MoeA_N PF03453.17 gi|14521620|ref|NP_127096.1| - 4.5e-43 146.7 0.1 1.7e-42 144.8 0.0 1.8 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|14521620|ref|NP_127096.1| - 2.1e-26 92.3 0.1 5.1e-26 91.1 0.1 1.7 2 0 0 2 2 2 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|14521620|ref|NP_127096.1| - 2.5e-19 69.2 0.0 6.9e-19 67.8 0.0 1.8 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) DUF123 PF01986.16 gi|14521621|ref|NP_127097.1| - 2.2e-22 79.4 0.1 3.2e-22 78.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 GIY-YIG PF01541.24 gi|14521621|ref|NP_127097.1| - 0.00092 19.4 0.2 0.002 18.3 0.2 1.6 1 0 0 1 1 1 1 GIY-YIG catalytic domain Peptidase_M24 PF00557.24 gi|14521622|ref|NP_127098.1| - 2.8e-44 151.3 0.0 3.3e-44 151.1 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 NIF3 PF01784.18 gi|14521623|ref|NP_127099.1| - 1.1e-59 202.0 0.0 1.4e-59 201.7 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) Aminotran_5 PF00266.19 gi|14521624|ref|NP_127100.1| - 5.9e-36 124.2 0.0 1.2e-35 123.2 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|14521624|ref|NP_127100.1| - 1.3e-07 31.2 0.0 2.1e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|14521624|ref|NP_127100.1| - 2.9e-07 29.4 0.0 4.2e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|14521624|ref|NP_127100.1| - 3e-07 30.0 0.0 3.2e-05 23.3 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II Aminotran_3 PF00202.21 gi|14521624|ref|NP_127100.1| - 1e-05 24.4 0.6 0.05 12.3 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-III GDC-P PF02347.16 gi|14521624|ref|NP_127100.1| - 0.00015 20.8 0.0 0.00023 20.1 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 gi|14521624|ref|NP_127100.1| - 0.013 14.8 0.0 0.022 14.0 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase RTT107_BRCT_5 PF16770.5 gi|14521624|ref|NP_127100.1| - 0.058 13.3 0.0 0.25 11.2 0.0 2.0 2 0 0 2 2 2 0 Regulator of Ty1 transposition protein 107 BRCT domain Succ_CoA_lig PF13607.6 gi|14521625|ref|NP_127101.1| - 6.8e-56 187.9 0.6 1e-54 184.1 0.1 2.6 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|14521625|ref|NP_127101.1| - 9e-18 64.9 0.2 5e-16 59.2 0.0 2.6 2 1 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|14521625|ref|NP_127101.1| - 0.00073 20.2 2.0 0.0056 17.3 0.1 2.8 2 0 0 2 2 2 1 CoA binding domain Flg_bbr_C PF06429.13 gi|14521625|ref|NP_127101.1| - 0.016 15.3 0.1 8.2 6.7 0.0 2.4 2 0 0 2 2 2 0 Flagellar basal body rod FlgEFG protein C-terminal Hydrolase_6 PF13344.6 gi|14521625|ref|NP_127101.1| - 0.093 12.9 0.0 0.32 11.1 0.0 1.9 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase CTP_transf_like PF01467.26 gi|14521626|ref|NP_127102.1| - 2.5e-19 69.9 0.0 2.8e-19 69.7 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|14521626|ref|NP_127102.1| - 0.00064 19.6 0.0 0.00092 19.1 0.0 1.4 1 0 0 1 1 1 1 FAD synthetase Topoisom_bac PF01131.20 gi|14521628|ref|NP_127104.1| - 1.1e-132 443.0 0.0 1.3e-132 442.8 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|14521628|ref|NP_127104.1| - 5.4e-20 71.5 2.0 3.3e-19 69.0 0.0 2.7 3 0 0 3 3 3 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|14521628|ref|NP_127104.1| - 1e-13 50.8 2.7 2.1e-13 49.8 2.7 1.6 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger DUF4364 PF14277.6 gi|14521628|ref|NP_127104.1| - 2 8.2 5.5 0.22 11.2 0.8 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) DUF460 PF04312.13 gi|14521629|ref|NP_127105.1| - 1.4e-50 170.7 0.3 4.4e-50 169.0 0.3 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) acVLRF1 PF18859.1 gi|14521629|ref|NP_127105.1| - 1.7e-05 25.1 0.2 1.7e-05 25.1 0.2 2.7 3 0 0 3 3 3 1 Actinobacteria/chloroflexi VLRF1 release factor Shugoshin_N PF07558.11 gi|14521629|ref|NP_127105.1| - 0.0041 16.9 2.6 0.018 14.9 2.6 2.2 1 0 0 1 1 1 1 Shugoshin N-terminal coiled-coil region Ribosomal_S14 PF00253.21 gi|14521629|ref|NP_127105.1| - 0.02 14.7 0.0 0.059 13.2 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e PHP PF02811.19 gi|14521629|ref|NP_127105.1| - 0.16 12.2 1.1 0.39 11.0 0.1 2.1 2 1 0 2 2 2 0 PHP domain ZnuA PF01297.17 gi|14521629|ref|NP_127105.1| - 0.52 9.7 8.9 3.1 7.1 1.8 3.3 2 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic DUF4988 PF16378.5 gi|14521629|ref|NP_127105.1| - 1.1 8.9 5.3 0.84 9.3 1.7 2.2 1 1 1 2 2 2 0 Domain of unknown function Spc29 PF17082.5 gi|14521629|ref|NP_127105.1| - 3.1 7.6 15.3 0.4 10.5 6.8 2.6 1 1 1 2 2 2 0 Spindle Pole Component 29 SpecificRecomb PF10136.9 gi|14521629|ref|NP_127105.1| - 3.7 5.7 5.5 6.1 5.0 5.5 1.2 1 0 0 1 1 1 0 Site-specific recombinase SlyX PF04102.12 gi|14521629|ref|NP_127105.1| - 8.8 7.0 17.0 1 10.1 8.3 3.4 2 1 1 3 3 3 0 SlyX TFIIE_alpha PF02002.17 gi|14521630|ref|NP_127106.1| - 7.4e-25 86.8 4.3 7.4e-25 86.8 4.3 1.4 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_9 PF08221.11 gi|14521630|ref|NP_127106.1| - 0.0014 18.7 0.0 0.0035 17.4 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Rad50_zn_hook PF04423.14 gi|14521630|ref|NP_127106.1| - 0.0063 16.3 0.1 0.0063 16.3 0.1 3.1 3 1 0 3 3 3 1 Rad50 zinc hook motif HTH_5 PF01022.20 gi|14521630|ref|NP_127106.1| - 0.0074 16.1 0.0 0.025 14.4 0.0 2.0 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|14521630|ref|NP_127106.1| - 0.0082 15.7 0.5 0.023 14.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|14521630|ref|NP_127106.1| - 0.021 14.8 0.4 0.046 13.7 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|14521630|ref|NP_127106.1| - 0.026 14.4 0.0 0.063 13.2 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_AsnC-type PF13404.6 gi|14521630|ref|NP_127106.1| - 0.035 13.9 0.0 0.13 12.2 0.0 2.0 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain RPAP3_C PF13877.6 gi|14521630|ref|NP_127106.1| - 0.037 14.5 0.1 0.31 11.6 0.1 2.4 1 1 1 2 2 2 0 Potential Monad-binding region of RPAP3 Sigma70_r3 PF04539.16 gi|14521630|ref|NP_127106.1| - 0.052 13.7 0.1 0.052 13.7 0.1 2.6 3 0 0 3 3 3 0 Sigma-70 region 3 HTH_DeoR PF08220.12 gi|14521630|ref|NP_127106.1| - 0.079 12.7 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|14521630|ref|NP_127106.1| - 0.14 12.0 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain zf-ribbon_3 PF13248.6 gi|14521630|ref|NP_127106.1| - 0.32 10.5 1.6 0.44 10.0 0.1 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Prefoldin_2 PF01920.20 gi|14521630|ref|NP_127106.1| - 2.2 8.3 8.5 0.44 10.5 1.3 2.8 3 0 0 3 3 3 0 Prefoldin subunit DUF2110 PF09883.9 gi|14521631|ref|NP_127107.1| - 1e-70 237.9 0.1 1.1e-70 237.7 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) PMT_2 PF13231.6 gi|14521632|ref|NP_127108.1| - 3.9 7.7 32.4 0.29 11.3 8.6 3.8 1 1 2 3 3 3 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Ribosomal_S6e PF01092.19 gi|14521633|ref|NP_127109.1| - 4.9e-38 129.9 0.1 1.5e-37 128.4 0.1 1.6 1 1 0 1 1 1 1 Ribosomal protein S6e GreA_GreB PF01272.19 gi|14521633|ref|NP_127109.1| - 0.047 13.6 1.4 0.11 12.4 0.0 2.1 3 0 0 3 3 3 0 Transcription elongation factor, GreA/GreB, C-term CW_binding_2 PF04122.12 gi|14521634|ref|NP_127110.1| - 6.7e-11 42.7 0.0 5.1e-06 27.0 0.0 2.4 2 0 0 2 2 2 2 Putative cell wall binding repeat 2 HTH_24 PF13412.6 gi|14521634|ref|NP_127110.1| - 3.3e-09 36.2 0.2 7.3e-09 35.1 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|14521634|ref|NP_127110.1| - 6.5e-09 35.6 0.1 1.4e-08 34.5 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|14521634|ref|NP_127110.1| - 1.3e-08 34.6 0.0 4.1e-08 33.0 0.0 1.9 2 0 0 2 2 1 1 MarR family MarR_2 PF12802.7 gi|14521634|ref|NP_127110.1| - 3.9e-07 29.9 0.0 7.7e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|14521634|ref|NP_127110.1| - 1.1e-06 28.5 0.1 3e-06 27.1 0.1 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|14521634|ref|NP_127110.1| - 2.3e-05 24.7 0.1 5.6e-05 23.5 0.0 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.10 gi|14521634|ref|NP_127110.1| - 5.2e-05 23.0 0.0 9.5e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|14521634|ref|NP_127110.1| - 0.0012 18.8 0.0 0.0029 17.5 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|14521634|ref|NP_127110.1| - 0.0014 18.2 0.0 0.0031 17.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family ThiP_synth PF10120.9 gi|14521634|ref|NP_127110.1| - 0.0023 17.6 0.0 0.037 13.6 0.0 2.5 3 0 0 3 3 3 1 Thiamine-phosphate synthase HTH_11 PF08279.12 gi|14521634|ref|NP_127110.1| - 0.0053 16.7 0.7 0.017 15.1 0.4 2.1 2 0 0 2 2 2 1 HTH domain ABC2_membrane_3 PF12698.7 gi|14521634|ref|NP_127110.1| - 0.0076 15.4 0.2 0.0098 15.0 0.2 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein HTH_5 PF01022.20 gi|14521634|ref|NP_127110.1| - 0.012 15.4 0.0 0.022 14.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|14521634|ref|NP_127110.1| - 0.013 15.3 0.1 0.028 14.3 0.1 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_27 PF13463.6 gi|14521634|ref|NP_127110.1| - 0.016 15.7 0.0 0.033 14.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|14521634|ref|NP_127110.1| - 0.025 14.8 0.0 0.081 13.1 0.0 1.9 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Spore_III_AF PF09581.10 gi|14521634|ref|NP_127110.1| - 0.03 14.4 0.3 0.054 13.5 0.1 1.5 2 0 0 2 2 1 0 Stage III sporulation protein AF (Spore_III_AF) SieB PF14163.6 gi|14521634|ref|NP_127110.1| - 0.052 13.0 0.3 0.052 13.0 0.3 2.0 2 1 0 2 2 2 0 Super-infection exclusion protein B OHA PF14418.6 gi|14521634|ref|NP_127110.1| - 0.054 13.3 0.1 9 6.2 0.0 2.5 2 0 0 2 2 2 0 OST-HTH Associated domain HTH_28 PF13518.6 gi|14521634|ref|NP_127110.1| - 0.071 13.3 1.5 0.21 11.8 0.0 2.4 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|14521634|ref|NP_127110.1| - 0.11 12.5 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix Cdc6_C PF09079.11 gi|14521634|ref|NP_127110.1| - 0.17 11.9 0.0 0.37 10.8 0.0 1.6 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain EamA PF00892.20 gi|14521635|ref|NP_127111.1| - 1.1e-46 158.4 42.8 1.8e-23 83.2 17.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family Sugar_transport PF06800.12 gi|14521635|ref|NP_127111.1| - 8.3e-07 28.6 24.1 5.6e-06 25.9 24.1 2.0 1 1 0 1 1 1 1 Sugar transport protein TPT PF03151.16 gi|14521635|ref|NP_127111.1| - 4e-06 26.4 18.7 0.00071 19.0 5.1 2.2 1 1 1 2 2 2 2 Triose-phosphate Transporter family Phlebovirus_G1 PF07243.11 gi|14521635|ref|NP_127111.1| - 0.34 9.2 1.4 0.45 8.8 1.4 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 AAA_31 PF13614.6 gi|14521636|ref|NP_127112.1| - 1.8e-27 96.4 0.2 2.7e-27 95.8 0.2 1.2 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|14521636|ref|NP_127112.1| - 1.2e-22 80.6 2.3 8.8e-22 77.7 2.3 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|14521636|ref|NP_127112.1| - 3.3e-20 72.5 0.1 5.5e-20 71.7 0.1 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CBP_BcsQ PF06564.12 gi|14521636|ref|NP_127112.1| - 2.3e-15 56.7 0.0 4.3e-15 55.8 0.0 1.4 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|14521636|ref|NP_127112.1| - 9e-14 51.6 0.3 4.2e-07 29.7 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 gi|14521636|ref|NP_127112.1| - 2.7e-08 33.4 0.8 1.5e-07 31.0 0.8 1.9 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|14521636|ref|NP_127112.1| - 7.5e-08 31.9 0.4 2.5e-06 26.9 0.3 2.3 2 1 0 2 2 2 1 Anion-transporting ATPase APS_kinase PF01583.20 gi|14521636|ref|NP_127112.1| - 0.00019 21.4 0.0 0.00029 20.8 0.0 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_26 PF13500.6 gi|14521636|ref|NP_127112.1| - 0.00024 21.0 1.6 0.0019 18.1 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|14521636|ref|NP_127112.1| - 0.0057 16.3 0.7 0.0085 15.7 0.7 1.4 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|14521636|ref|NP_127112.1| - 0.011 15.4 1.1 0.036 13.7 0.9 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|14521636|ref|NP_127112.1| - 0.03 14.0 0.2 0.045 13.5 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|14521636|ref|NP_127112.1| - 0.039 14.5 0.9 0.089 13.3 0.9 1.6 1 1 0 1 1 1 0 AAA domain VirC1 PF07015.11 gi|14521636|ref|NP_127112.1| - 0.092 12.0 0.4 0.15 11.3 0.4 1.3 1 0 0 1 1 1 0 VirC1 protein Zeta_toxin PF06414.12 gi|14521636|ref|NP_127112.1| - 0.16 11.2 0.5 0.27 10.5 0.5 1.3 1 0 0 1 1 1 0 Zeta toxin CLP1_P PF16575.5 gi|14521636|ref|NP_127112.1| - 0.16 11.7 0.2 0.27 11.0 0.2 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ATP_bind_1 PF03029.17 gi|14521636|ref|NP_127112.1| - 0.18 11.5 1.3 1.1 9.0 1.3 1.9 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein ATP_bind_1 PF03029.17 gi|14521637|ref|NP_127113.1| - 3.5e-61 207.1 0.0 4.1e-61 206.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 gi|14521637|ref|NP_127113.1| - 1.2e-05 25.0 0.0 0.00034 20.2 0.0 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_24 PF13479.6 gi|14521637|ref|NP_127113.1| - 2.3e-05 24.2 0.0 3.7e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|14521637|ref|NP_127113.1| - 3.4e-05 23.6 0.1 0.0032 17.1 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain cobW PF02492.19 gi|14521637|ref|NP_127113.1| - 5.8e-05 22.7 0.0 0.18 11.3 0.0 2.4 2 1 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|14521637|ref|NP_127113.1| - 9.5e-05 22.4 0.1 2 8.3 0.0 3.6 3 1 1 4 4 4 2 RsgA GTPase CbiA PF01656.23 gi|14521637|ref|NP_127113.1| - 0.00024 21.2 0.0 0.00037 20.6 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 gi|14521637|ref|NP_127113.1| - 0.00042 20.7 0.0 0.0007 20.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain CLP1_P PF16575.5 gi|14521637|ref|NP_127113.1| - 0.0022 17.8 0.0 0.025 14.4 0.0 2.2 1 1 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop NTPase_1 PF03266.15 gi|14521637|ref|NP_127113.1| - 0.0026 17.7 0.2 0.0087 16.0 0.2 1.8 1 1 0 1 1 1 1 NTPase AAA_14 PF13173.6 gi|14521637|ref|NP_127113.1| - 0.0026 17.8 0.3 0.018 15.1 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|14521637|ref|NP_127113.1| - 0.0038 17.8 0.0 0.0066 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|14521637|ref|NP_127113.1| - 0.0043 17.0 0.0 0.0065 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|14521637|ref|NP_127113.1| - 0.0061 16.7 0.0 0.0096 16.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|14521637|ref|NP_127113.1| - 0.0064 16.7 0.2 0.058 13.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_31 PF13614.6 gi|14521637|ref|NP_127113.1| - 0.015 15.2 0.3 2.5 8.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|14521637|ref|NP_127113.1| - 0.022 14.5 0.1 0.032 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|14521637|ref|NP_127113.1| - 0.027 14.2 0.0 0.14 11.9 0.0 2.0 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_7 PF12775.7 gi|14521637|ref|NP_127113.1| - 0.034 13.7 0.0 0.051 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 gi|14521637|ref|NP_127113.1| - 0.075 13.3 0.1 0.19 12.0 0.1 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|14521637|ref|NP_127113.1| - 0.084 12.0 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain PduV-EutP PF10662.9 gi|14521637|ref|NP_127113.1| - 0.091 12.5 0.0 0.57 9.9 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 gi|14521637|ref|NP_127113.1| - 0.091 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 gi|14521637|ref|NP_127113.1| - 0.12 12.4 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS_kinase PF01583.20 gi|14521637|ref|NP_127113.1| - 0.14 12.0 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Adenylylsulphate kinase MeaB PF03308.16 gi|14521637|ref|NP_127113.1| - 0.19 10.6 0.0 0.52 9.3 0.0 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MipZ PF09140.11 gi|14521637|ref|NP_127113.1| - 0.2 10.9 0.0 0.42 9.9 0.0 1.6 1 1 0 1 1 1 0 ATPase MipZ G-alpha PF00503.20 gi|14521637|ref|NP_127113.1| - 0.2 10.8 0.3 4 6.5 0.0 2.5 2 1 1 3 3 3 0 G-protein alpha subunit Sld5 PF05916.11 gi|14521638|ref|NP_127114.1| - 7.2e-10 39.3 0.8 9.2e-10 39.0 0.8 1.1 1 0 0 1 1 1 1 GINS complex protein MCM PF00493.23 gi|14521639|ref|NP_127115.1| - 4.8e-89 297.3 0.1 2e-56 190.6 0.0 3.4 3 0 0 3 3 3 3 MCM P-loop domain Intein_splicing PF14890.6 gi|14521639|ref|NP_127115.1| - 2.8e-52 176.2 0.5 2.1e-26 92.5 0.0 3.3 2 0 0 2 2 2 2 Intein splicing domain MCM_OB PF17207.3 gi|14521639|ref|NP_127115.1| - 1.2e-33 115.7 1.3 2.4e-33 114.7 1.3 1.5 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|14521639|ref|NP_127115.1| - 2.6e-32 111.1 4.1 6.5e-32 109.8 4.1 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 gi|14521639|ref|NP_127115.1| - 1.6e-12 47.9 0.1 5.4e-12 46.2 0.1 1.9 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|14521639|ref|NP_127115.1| - 8e-07 28.6 0.0 3.1e-06 26.7 0.0 1.9 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI PT-HINT PF07591.11 gi|14521639|ref|NP_127115.1| - 0.00021 21.6 0.3 0.023 14.9 0.0 3.4 3 0 0 3 3 3 1 Pretoxin HINT domain AAA_5 PF07728.14 gi|14521639|ref|NP_127115.1| - 0.00025 21.0 0.1 0.022 14.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) HypA PF01155.19 gi|14521639|ref|NP_127115.1| - 0.0013 18.8 0.2 0.0064 16.5 0.2 2.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sigma54_activat PF00158.26 gi|14521639|ref|NP_127115.1| - 0.0029 17.4 1.6 0.0043 16.8 0.1 2.0 3 0 0 3 3 1 1 Sigma-54 interaction domain Zn-ribbon_8 PF09723.10 gi|14521639|ref|NP_127115.1| - 0.011 15.8 1.3 0.026 14.7 1.3 1.6 1 0 0 1 1 1 0 Zinc ribbon domain MCM_bind PF09739.9 gi|14521639|ref|NP_127115.1| - 0.011 14.2 0.0 0.024 13.1 0.0 1.4 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Ribosomal_L27e PF01777.18 gi|14521639|ref|NP_127115.1| - 0.015 15.6 2.6 0.076 13.4 0.2 2.8 2 0 0 2 2 2 0 Ribosomal L27e protein family AAA_3 PF07726.11 gi|14521639|ref|NP_127115.1| - 0.017 15.0 0.1 0.16 11.8 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PhnA_Zn_Ribbon PF08274.12 gi|14521639|ref|NP_127115.1| - 0.047 13.6 1.6 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 PhnA Zinc-Ribbon EAP30 PF04157.16 gi|14521639|ref|NP_127115.1| - 0.059 12.7 0.7 0.26 10.5 0.4 2.2 2 0 0 2 2 2 0 EAP30/Vps36 family DUF1451 PF07295.11 gi|14521639|ref|NP_127115.1| - 0.082 12.9 0.7 0.58 10.2 0.7 2.5 1 0 0 1 1 1 0 Zinc-ribbon containing domain Hint PF01079.20 gi|14521639|ref|NP_127115.1| - 0.11 12.0 0.0 3.1 7.3 0.0 2.4 2 0 0 2 2 2 0 Hint module TBPIP PF07106.13 gi|14521639|ref|NP_127115.1| - 0.12 12.4 0.6 1.6 8.7 0.0 2.8 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain RPA_C PF08784.11 gi|14521639|ref|NP_127115.1| - 0.12 13.1 0.0 0.33 11.6 0.0 1.7 1 0 0 1 1 1 0 Replication protein A C terminal zf-C4_Topoisom PF01396.19 gi|14521639|ref|NP_127115.1| - 0.13 12.1 2.2 5.4 6.9 0.1 2.5 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger FlbT PF07378.11 gi|14521639|ref|NP_127115.1| - 0.24 11.5 2.0 8.9 6.4 0.0 3.4 3 0 0 3 3 3 0 Flagellar protein FlbT zf-IS66 PF13005.7 gi|14521639|ref|NP_127115.1| - 0.25 11.8 1.6 35 4.9 0.0 4.2 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 CARD PF00619.21 gi|14521639|ref|NP_127115.1| - 0.67 10.0 4.5 13 5.9 0.1 3.8 4 0 0 4 4 3 0 Caspase recruitment domain A2L_zn_ribbon PF08792.10 gi|14521639|ref|NP_127115.1| - 0.73 9.6 4.2 0.73 9.6 0.2 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF4423 PF14394.6 gi|14521639|ref|NP_127115.1| - 3 7.5 6.7 5.9 6.6 0.1 3.9 5 0 0 5 5 4 0 Domain of unknown function (DUF4423) HEPN PF05168.14 gi|14521639|ref|NP_127115.1| - 3.9 7.6 6.5 55 3.9 0.2 3.8 2 1 0 2 2 2 0 HEPN domain eIF-5_eIF-2B PF01873.17 gi|14521640|ref|NP_127116.1| - 4.9e-39 132.8 0.0 5.7e-39 132.6 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 gi|14521640|ref|NP_127116.1| - 0.00085 19.7 0.7 0.0015 18.9 0.7 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 gi|14521640|ref|NP_127116.1| - 0.0066 16.5 0.6 1.2 9.3 0.0 2.5 2 0 0 2 2 2 1 Zinc ribbon domain Elf1 PF05129.13 gi|14521640|ref|NP_127116.1| - 0.011 15.7 0.2 0.02 14.9 0.2 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like FdhE PF04216.12 gi|14521640|ref|NP_127116.1| - 0.017 15.0 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation TF_Zn_Ribbon PF08271.12 gi|14521640|ref|NP_127116.1| - 0.023 14.2 0.7 0.053 13.1 0.7 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|14521640|ref|NP_127116.1| - 0.05 13.6 0.7 0.085 12.8 0.7 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-TFIIB PF13453.6 gi|14521640|ref|NP_127116.1| - 0.069 12.5 3.7 0.14 11.5 0.9 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger HTH_19 PF12844.7 gi|14521640|ref|NP_127116.1| - 0.084 12.9 0.2 0.2 11.7 0.0 1.8 2 1 0 2 2 2 0 Helix-turn-helix domain Prok-RING_1 PF14446.6 gi|14521640|ref|NP_127116.1| - 0.14 12.1 0.9 0.96 9.4 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zinc_ribbon_2 PF13240.6 gi|14521640|ref|NP_127116.1| - 0.14 11.9 3.2 9 6.2 0.1 2.6 3 0 0 3 3 3 0 zinc-ribbon domain Vps36-NZF-N PF16988.5 gi|14521640|ref|NP_127116.1| - 0.16 11.4 0.7 0.33 10.4 0.7 1.6 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RRN7 PF11781.8 gi|14521640|ref|NP_127116.1| - 0.18 11.5 0.8 5.5 6.8 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-ribbon_3 PF13248.6 gi|14521640|ref|NP_127116.1| - 0.2 11.1 2.6 0.78 9.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|14521640|ref|NP_127116.1| - 0.2 11.6 3.5 5.1 7.1 0.1 2.3 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf_C2H2_13 PF18508.1 gi|14521640|ref|NP_127116.1| - 0.64 9.6 2.7 3.6 7.3 0.2 2.7 3 0 0 3 3 3 0 Zinc finger domain NikR_C PF08753.11 gi|14521641|ref|NP_127117.1| - 2.7e-34 117.2 4.9 3.9e-34 116.6 4.9 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|14521641|ref|NP_127117.1| - 1.2e-08 34.6 0.8 2.3e-08 33.7 0.8 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family DUF3052 PF11253.8 gi|14521641|ref|NP_127117.1| - 0.0026 17.6 0.2 0.0029 17.5 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3052) HicB_lk_antitox PF15919.5 gi|14521641|ref|NP_127117.1| - 0.071 13.2 0.1 0.2 11.7 0.0 1.7 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system CBS PF00571.28 gi|14521642|ref|NP_127118.1| - 2.9e-44 149.3 16.8 5.5e-18 65.2 0.6 4.4 4 0 0 4 4 4 4 CBS domain Hrs_helical PF12210.8 gi|14521642|ref|NP_127118.1| - 0.026 15.0 0.0 0.068 13.7 0.0 1.7 1 0 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate PPR PF01535.20 gi|33356789|ref|NP_127119.2| - 0.73 10.2 4.7 21 5.6 0.1 3.9 4 0 0 4 4 4 0 PPR repeat DUF3881 PF12997.7 gi|14521644|ref|NP_127120.1| - 0.15 11.2 0.0 0.35 10.1 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function, E. rectale Gene description (DUF3881) 2-Hacid_dh_C PF02826.19 gi|14521645|ref|NP_127121.1| - 6.8e-70 234.0 0.0 9.9e-70 233.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|14521645|ref|NP_127121.1| - 3.4e-37 127.1 0.0 3.9e-37 126.9 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|14521645|ref|NP_127121.1| - 1.5e-07 31.7 0.0 6.1e-07 29.7 0.0 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|14521645|ref|NP_127121.1| - 4.8e-07 30.3 0.0 1e-06 29.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent PDH PF02153.17 gi|14521645|ref|NP_127121.1| - 1.2e-05 24.5 0.0 1.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydrogenase IlvN PF07991.12 gi|14521645|ref|NP_127121.1| - 4.1e-05 23.2 0.0 9.3e-05 22.1 0.0 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 gi|14521645|ref|NP_127121.1| - 0.00041 20.7 0.0 0.0026 18.2 0.0 2.0 2 0 0 2 2 2 1 Putative NAD(P)-binding AdoHcyase_NAD PF00670.21 gi|14521645|ref|NP_127121.1| - 0.0012 18.9 0.1 0.035 14.2 0.0 2.5 2 1 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.20 gi|14521645|ref|NP_127121.1| - 0.0053 16.8 0.1 0.032 14.3 0.0 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|14521645|ref|NP_127121.1| - 0.033 13.5 0.0 0.12 11.6 0.0 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|14521645|ref|NP_127121.1| - 0.033 14.4 0.1 0.14 12.4 0.1 2.2 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Rossmann-like PF10727.9 gi|14521645|ref|NP_127121.1| - 0.069 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Rossmann-like domain NAD_Gly3P_dh_N PF01210.23 gi|14521645|ref|NP_127121.1| - 0.12 12.3 0.3 5.5 6.9 0.0 2.5 1 1 1 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AAA_14 PF13173.6 gi|14521646|ref|NP_127122.1| - 2.5e-32 111.6 0.0 8e-32 110.0 0.0 1.8 2 0 0 2 2 2 1 AAA domain DUF4143 PF13635.6 gi|14521646|ref|NP_127122.1| - 2.1e-10 40.8 0.1 6.3e-10 39.3 0.1 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_24 PF13479.6 gi|14521646|ref|NP_127122.1| - 0.013 15.2 0.0 0.029 14.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain RAP-1 PF03085.15 gi|14521646|ref|NP_127122.1| - 0.32 10.7 2.8 0.33 10.6 1.1 1.9 2 0 0 2 2 2 0 Rhoptry-associated protein 1 (RAP-1) Peptidase_C15 PF01470.17 gi|14521647|ref|NP_127123.1| - 5.8e-81 271.5 0.1 6.4e-81 271.4 0.1 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase Peptidase_S9 PF00326.21 gi|14521648|ref|NP_127124.1| - 1.6e-53 181.3 0.0 2.4e-53 180.7 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|14521648|ref|NP_127124.1| - 3.9e-11 43.1 0.0 7.5e-08 32.3 0.0 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 gi|14521648|ref|NP_127124.1| - 5e-06 25.4 0.8 0.0009 18.0 0.8 3.0 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) PD40 PF07676.12 gi|14521648|ref|NP_127124.1| - 1.7e-05 24.7 0.0 0.00081 19.3 0.0 3.2 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Abhydrolase_1 PF00561.20 gi|14521648|ref|NP_127124.1| - 5.6e-05 22.9 0.0 0.0002 21.1 0.0 1.8 1 1 1 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|14521648|ref|NP_127124.1| - 0.00014 21.3 0.0 0.0087 15.3 0.0 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|14521648|ref|NP_127124.1| - 0.00092 18.8 0.0 0.0022 17.6 0.0 1.6 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_6 PF12697.7 gi|14521648|ref|NP_127124.1| - 0.0055 17.3 0.0 0.013 16.1 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase family DUF2920 PF11144.8 gi|14521648|ref|NP_127124.1| - 0.012 14.8 0.0 3.9 6.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2920) Abhydrolase_2 PF02230.16 gi|14521648|ref|NP_127124.1| - 0.015 15.1 1.1 0.74 9.6 0.0 3.2 3 1 0 3 3 3 0 Phospholipase/Carboxylesterase PAF-AH_p_II PF03403.13 gi|14521648|ref|NP_127124.1| - 0.031 12.8 0.0 0.96 7.9 0.0 2.3 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 gi|14521648|ref|NP_127124.1| - 0.038 12.9 0.0 0.065 12.1 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme DPPIV_N PF00930.21 gi|14521648|ref|NP_127124.1| - 0.075 11.8 0.1 1.5 7.5 0.0 2.5 2 1 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region EamA PF00892.20 gi|14521649|ref|NP_127125.1| - 7.1e-40 136.3 36.1 3.7e-24 85.5 14.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 gi|14521649|ref|NP_127125.1| - 0.0039 17.2 7.0 0.017 15.1 3.5 3.0 2 2 0 2 2 2 1 Putative transmembrane family 234 TPT PF03151.16 gi|14521649|ref|NP_127125.1| - 0.023 14.0 15.2 0.17 11.2 1.8 2.5 1 1 0 2 2 2 0 Triose-phosphate Transporter family TPR_1 PF00515.28 gi|14521650|ref|NP_127126.1| - 3e-08 33.1 1.5 5e-06 26.1 0.0 4.3 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|14521650|ref|NP_127126.1| - 2.9e-06 27.0 3.2 0.00023 21.1 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|14521650|ref|NP_127126.1| - 1.5e-05 25.2 0.2 0.011 16.0 0.0 3.7 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|14521650|ref|NP_127126.1| - 5.8e-05 23.0 2.8 0.00028 20.9 0.1 3.6 2 1 0 2 2 2 1 Tetratricopeptide repeat PPR PF01535.20 gi|14521650|ref|NP_127126.1| - 6.3e-05 22.9 1.8 0.28 11.5 0.0 5.0 5 0 0 5 5 5 1 PPR repeat TPR_7 PF13176.6 gi|14521650|ref|NP_127126.1| - 0.00062 19.6 0.9 0.03 14.4 0.1 4.0 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|14521650|ref|NP_127126.1| - 0.00062 20.4 0.8 0.27 12.1 0.0 4.6 5 1 1 6 6 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|14521650|ref|NP_127126.1| - 0.04 14.6 0.1 3.5 8.3 0.0 2.8 2 1 2 4 4 3 0 Tetratricopeptide repeat NARP1 PF12569.8 gi|14521650|ref|NP_127126.1| - 0.044 12.7 0.0 0.07 12.0 0.0 1.3 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_10 PF13374.6 gi|14521650|ref|NP_127126.1| - 0.075 12.9 0.7 0.86 9.6 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|14521650|ref|NP_127126.1| - 0.081 12.6 0.0 0.69 9.6 0.0 2.5 2 0 0 2 2 2 0 TPR repeat DUF1800 PF08811.11 gi|14521650|ref|NP_127126.1| - 0.083 11.9 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) TPR_6 PF13174.6 gi|14521650|ref|NP_127126.1| - 0.77 10.5 4.3 1.1 10.1 0.0 3.6 6 0 0 6 6 4 0 Tetratricopeptide repeat DUF531 PF04407.12 gi|14521651|ref|NP_127127.1| - 4.4e-77 258.0 0.0 5e-77 257.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF531) SPOUT_MTase_2 PF14419.6 gi|14521651|ref|NP_127127.1| - 0.00062 19.2 0.1 0.00091 18.6 0.1 1.2 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP Methyltrn_RNA_4 PF09936.9 gi|14521651|ref|NP_127127.1| - 0.042 13.7 0.0 0.2 11.5 0.0 1.9 2 1 0 2 2 2 0 SAM-dependent RNA methyltransferase Peptidase_S24 PF00717.23 gi|14521652|ref|NP_127128.1| - 2e-06 27.6 0.5 3.9e-06 26.7 0.5 1.4 1 0 0 1 1 1 1 Peptidase S24-like ADP_PFK_GK PF04587.15 gi|14521653|ref|NP_127129.1| - 2.4e-93 313.0 0.0 2.8e-93 312.8 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region V-ATPase_C PF03223.15 gi|14521653|ref|NP_127129.1| - 0.025 14.0 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 V-ATPase subunit C PKD_channel PF08016.12 gi|14521654|ref|NP_127130.1| - 0.16 10.6 0.4 0.22 10.2 0.4 1.1 1 0 0 1 1 1 0 Polycystin cation channel DUF234 PF03008.14 gi|14521655|ref|NP_127131.1| - 2.9e-24 85.4 0.5 4.3e-24 84.8 0.5 1.3 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function DUF986 PF06173.12 gi|14521655|ref|NP_127131.1| - 0.16 12.0 0.1 0.3 11.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF986) ATPase_2 PF01637.18 gi|14521656|ref|NP_127132.1| - 8.2e-09 35.7 0.0 1.6e-08 34.7 0.0 1.4 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea HTH_IclR PF09339.10 gi|14521656|ref|NP_127132.1| - 3.3e-08 33.2 0.0 7.9e-08 32.0 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|14521656|ref|NP_127132.1| - 5.2e-06 26.2 0.0 1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|14521656|ref|NP_127132.1| - 0.00066 19.6 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|14521656|ref|NP_127132.1| - 0.0012 18.7 0.0 0.0025 17.7 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_9 PF08221.11 gi|14521656|ref|NP_127132.1| - 0.011 15.9 0.0 0.027 14.6 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HxlR PF01638.17 gi|14521656|ref|NP_127132.1| - 0.017 15.0 0.0 0.032 14.1 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix TrmB PF01978.19 gi|14521656|ref|NP_127132.1| - 0.02 14.8 0.1 0.037 13.9 0.1 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|14521656|ref|NP_127132.1| - 0.029 13.9 0.0 0.066 12.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Glycos_transf_2 PF00535.26 gi|14521657|ref|NP_127133.1| - 2.5e-28 99.0 0.0 3.9e-28 98.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521657|ref|NP_127133.1| - 2e-10 40.9 0.0 5.8e-10 39.4 0.0 1.5 1 1 0 2 2 2 1 Glycosyltransferase like family 2 ATP1G1_PLM_MAT8 PF02038.16 gi|14521657|ref|NP_127133.1| - 0.025 14.0 4.9 0.2 11.1 0.8 2.6 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family YflT PF11181.8 gi|14521657|ref|NP_127133.1| - 0.054 14.0 0.0 0.098 13.2 0.0 1.4 1 0 0 1 1 1 0 Heat induced stress protein YflT DUF374 PF04028.13 gi|14521657|ref|NP_127133.1| - 0.1 12.2 0.1 0.28 10.7 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF374) Glutaredoxin PF00462.24 gi|14521657|ref|NP_127133.1| - 0.15 12.3 0.0 0.46 10.7 0.0 1.8 1 0 0 1 1 1 0 Glutaredoxin Glyco_transf_7N PF13733.6 gi|14521657|ref|NP_127133.1| - 0.17 11.6 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 DUF373 PF04123.13 gi|14521657|ref|NP_127133.1| - 0.44 9.9 16.5 0.53 9.7 11.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Glycos_transf_1 PF00534.20 gi|14521658|ref|NP_127134.1| - 4.3e-42 143.6 0.0 6.1e-42 143.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14521658|ref|NP_127134.1| - 1.6e-26 93.3 0.0 2.6e-26 92.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|14521658|ref|NP_127134.1| - 5.4e-20 72.1 0.0 9.4e-20 71.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|14521658|ref|NP_127134.1| - 3.4e-06 27.6 0.0 5.8e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Polysacc_synt PF01943.17 gi|14521659|ref|NP_127135.1| - 3.2e-05 23.5 54.5 8.2e-05 22.1 34.7 2.2 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|14521659|ref|NP_127135.1| - 0.00024 21.2 8.8 0.00024 21.2 8.8 4.1 1 1 3 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|14521659|ref|NP_127135.1| - 0.0066 16.1 11.3 0.0066 16.1 11.3 4.1 2 2 1 3 3 3 1 MatE DUF4514 PF14986.6 gi|14521659|ref|NP_127135.1| - 0.23 11.4 1.9 0.7 9.9 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) Tsc35 PF15079.6 gi|14521659|ref|NP_127135.1| - 0.36 10.4 0.3 0.53 9.8 0.3 1.1 1 0 0 1 1 1 0 Testis-specific protein 35 DUF2808 PF10989.8 gi|33356792|ref|NP_877698.1| - 1.5e-06 28.3 1.5 3.7e-05 23.7 0.3 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF2808) LPAM_1 PF08139.12 gi|33356792|ref|NP_877698.1| - 0.74 10.4 4.6 1.6 9.4 4.6 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Glycos_transf_1 PF00534.20 gi|14521660|ref|NP_127136.1| - 8.4e-40 136.1 0.0 1.4e-39 135.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14521660|ref|NP_127136.1| - 3.8e-35 121.2 0.0 5.7e-35 120.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|14521660|ref|NP_127136.1| - 1.3e-23 83.9 0.0 4.1e-23 82.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|14521660|ref|NP_127136.1| - 3.5e-13 50.3 0.0 6.5e-13 49.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|14521660|ref|NP_127136.1| - 7.6e-12 45.5 0.0 1.3e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|14521660|ref|NP_127136.1| - 1.9e-11 44.2 0.1 2.1e-10 40.8 0.0 2.1 1 1 1 2 2 2 1 Glycosyl transferase 4-like DUF2325 PF10087.9 gi|14521660|ref|NP_127136.1| - 0.00052 20.1 0.0 0.0083 16.2 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2325) Glyco_transf_5 PF08323.11 gi|14521660|ref|NP_127136.1| - 0.025 14.3 0.0 4 7.1 0.0 2.2 1 1 1 2 2 2 0 Starch synthase catalytic domain STT3 PF02516.14 gi|14521661|ref|NP_127137.1| - 1e-05 24.7 35.5 2.9e-05 23.2 35.5 2.0 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF2964 PF11177.8 gi|14521661|ref|NP_127137.1| - 0.042 14.1 2.2 0.74 10.1 0.4 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2964) TetR_N PF00440.23 gi|14521663|ref|NP_127139.1| - 2.4e-20 72.1 0.8 3.8e-20 71.4 0.8 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|14521663|ref|NP_127139.1| - 0.0013 18.8 0.0 0.0021 18.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase TniB PF05621.11 gi|14521663|ref|NP_127139.1| - 0.057 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein DUF4268 PF14088.6 gi|14521664|ref|NP_127140.1| - 0.071 13.0 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) Proton_antipo_M PF00361.20 gi|14521665|ref|NP_127141.1| - 5.3e-65 219.5 29.6 5.3e-65 219.5 29.6 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|14521665|ref|NP_127141.1| - 1.1e-05 25.4 0.6 1.1e-05 25.4 0.6 3.6 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MNHE PF01899.16 gi|14521666|ref|NP_127142.1| - 2.4e-38 131.2 1.5 2.7e-38 131.0 1.5 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit ECF-ribofla_trS PF07155.12 gi|14521666|ref|NP_127142.1| - 0.066 13.2 2.3 0.088 12.8 2.3 1.2 1 0 0 1 1 1 0 ECF-type riboflavin transporter, S component HXXEE PF13787.6 gi|14521666|ref|NP_127142.1| - 0.21 12.4 3.0 0.95 10.3 3.0 2.1 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif Oxidored_q2 PF00420.24 gi|14521667|ref|NP_127143.1| - 7.7e-19 67.3 4.3 9.3e-19 67.0 4.3 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MnhB PF04039.13 gi|14521668|ref|NP_127144.1| - 5.4e-22 78.4 8.9 5.4e-22 78.4 8.9 1.9 2 1 0 2 2 2 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF2106 PF09879.9 gi|14521668|ref|NP_127144.1| - 0.0019 17.7 0.2 0.0044 16.6 0.2 1.7 1 0 0 1 1 1 1 Predicted membrane protein (DUF2106) NrsF PF06532.11 gi|14521668|ref|NP_127144.1| - 0.053 13.2 1.8 0.28 10.9 1.7 2.1 1 1 0 1 1 1 0 Negative regulator of sigma F PhaG_MnhG_YufB PF03334.14 gi|14521669|ref|NP_127145.1| - 3.8e-17 62.3 14.7 4.8e-17 62.0 14.7 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter subunit VirB3 PF05101.13 gi|14521669|ref|NP_127145.1| - 6.8 7.0 7.2 0.52 10.6 2.3 1.6 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Oxidored_q6 PF01058.22 gi|14521670|ref|NP_127146.1| - 9e-30 103.2 0.0 1.3e-29 102.7 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|14521671|ref|NP_127147.1| - 3.7e-16 58.2 24.5 2.5e-09 36.5 5.5 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|14521671|ref|NP_127147.1| - 4.1e-14 52.5 33.9 1.1e-09 38.3 10.1 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14521671|ref|NP_127147.1| - 6.3e-14 51.4 23.9 3.7e-08 33.1 4.5 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521671|ref|NP_127147.1| - 1.4e-13 51.2 9.5 1.4e-13 51.2 9.5 2.7 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521671|ref|NP_127147.1| - 9.7e-12 44.8 17.0 5.4e-07 29.6 3.3 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|14521671|ref|NP_127147.1| - 4.5e-11 42.1 25.2 5e-07 29.4 4.4 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14521671|ref|NP_127147.1| - 2.1e-10 40.6 20.4 4.2e-09 36.4 7.7 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521671|ref|NP_127147.1| - 1.8e-08 35.2 15.3 0.0014 19.5 0.4 3.2 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|14521671|ref|NP_127147.1| - 8.9e-07 28.9 11.1 3.4e-05 24.0 0.9 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|14521671|ref|NP_127147.1| - 9.3e-07 29.2 13.6 0.006 17.0 0.3 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|14521671|ref|NP_127147.1| - 6.7e-06 26.7 19.4 0.00094 20.0 4.3 3.1 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14521671|ref|NP_127147.1| - 1.4e-05 25.5 17.5 0.034 14.7 11.6 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|14521671|ref|NP_127147.1| - 0.00086 20.0 10.3 0.0058 17.3 0.5 2.6 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|14521671|ref|NP_127147.1| - 0.012 15.8 1.2 0.012 15.8 1.2 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|14521671|ref|NP_127147.1| - 0.014 15.9 17.9 0.029 14.9 4.1 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_11 PF13247.6 gi|14521671|ref|NP_127147.1| - 0.04 14.1 1.8 0.04 14.1 1.8 2.4 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|14521671|ref|NP_127147.1| - 0.049 14.5 14.8 0.09 13.6 0.2 2.9 3 1 1 4 4 4 0 4Fe-4S dicluster domain Caleosin PF05042.13 gi|14521671|ref|NP_127147.1| - 0.093 12.7 0.0 5.6 6.9 0.0 2.1 1 1 0 2 2 2 0 Caleosin related protein ETF_QO PF05187.13 gi|14521671|ref|NP_127147.1| - 0.39 10.9 5.0 0.41 10.8 2.1 2.3 2 1 1 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Complex1_49kDa PF00346.19 gi|14521672|ref|NP_127148.1| - 9.6e-60 202.0 0.8 1.2e-41 142.6 0.6 2.3 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|14521672|ref|NP_127148.1| - 1e-21 77.8 0.1 7.7e-21 75.0 0.0 2.2 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 gi|14521672|ref|NP_127148.1| - 1.6e-16 60.3 2.1 7.1e-13 48.3 0.1 2.9 3 1 0 3 3 3 2 Nickel-dependent hydrogenase NADHdh PF00146.21 gi|14521673|ref|NP_127149.1| - 1e-44 153.1 23.1 1.3e-44 152.8 23.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Proton_antipo_M PF00361.20 gi|14521674|ref|NP_127150.1| - 3.8e-49 167.5 21.8 1e-48 166.1 21.8 1.7 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|14521674|ref|NP_127150.1| - 9.6e-06 25.6 0.2 9.6e-06 25.6 0.2 3.1 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|14521675|ref|NP_127151.1| - 9.5e-52 176.0 25.3 9.5e-52 176.0 25.3 2.3 2 1 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|14521675|ref|NP_127151.1| - 1.4e-07 31.4 1.9 4.5e-07 29.8 0.4 2.8 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Fer4_11 PF13247.6 gi|14521676|ref|NP_127152.1| - 1.8e-24 85.7 10.9 1.8e-24 85.7 10.9 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|14521676|ref|NP_127152.1| - 2.8e-14 52.3 35.0 1.6e-06 27.7 3.2 5.6 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|14521676|ref|NP_127152.1| - 3e-13 50.1 27.9 1.6e-06 28.6 10.5 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14521676|ref|NP_127152.1| - 1.2e-12 47.3 36.6 1.2e-05 25.1 3.0 5.0 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|14521676|ref|NP_127152.1| - 1.2e-11 43.9 32.1 0.00022 21.1 2.2 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|14521676|ref|NP_127152.1| - 2.8e-11 43.4 27.2 1.7e-06 28.1 9.1 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|14521676|ref|NP_127152.1| - 5.6e-08 32.8 31.2 6.9e-05 22.9 10.3 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|14521676|ref|NP_127152.1| - 8.4e-06 26.6 27.9 0.53 11.3 0.0 4.6 3 1 1 4 4 4 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|14521676|ref|NP_127152.1| - 5.3e-05 23.9 42.7 0.023 15.6 4.9 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|14521676|ref|NP_127152.1| - 0.0006 20.3 28.7 0.27 11.8 1.7 4.1 3 1 0 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|14521676|ref|NP_127152.1| - 0.00079 19.7 37.8 0.041 14.4 4.0 4.7 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|14521676|ref|NP_127152.1| - 0.00083 19.4 29.2 0.0049 17.0 8.6 3.5 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|14521676|ref|NP_127152.1| - 0.38 11.2 33.6 28 5.3 13.5 4.3 2 2 0 2 2 2 0 4Fe-4S dicluster domain Molybdopterin PF00384.22 gi|14521677|ref|NP_127153.1| - 2.3e-90 303.6 0.0 2.8e-90 303.4 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|14521677|ref|NP_127153.1| - 1.7e-31 108.5 0.0 3.5e-31 107.5 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|14521677|ref|NP_127153.1| - 1.9e-08 34.1 0.3 4.3e-08 33.0 0.3 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain CDC48_N PF02359.18 gi|14521677|ref|NP_127153.1| - 0.042 14.0 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain HTH_5 PF01022.20 gi|14521678|ref|NP_127154.1| - 0.0097 15.8 0.1 3.3 7.6 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family PMM PF03332.13 gi|14521678|ref|NP_127154.1| - 0.036 13.8 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic phosphomannomutase DUF1102 PF06510.11 gi|14521679|ref|NP_127155.1| - 6.3e-54 182.0 0.5 7.4e-54 181.8 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1102) DUF1102 PF06510.11 gi|14521680|ref|NP_127156.1| - 5.9e-52 175.6 0.1 6.9e-52 175.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1102) Peptidase_S24 PF00717.23 gi|14521681|ref|NP_127157.1| - 4.2e-10 39.4 0.4 2.1e-09 37.2 0.0 2.2 2 0 0 2 2 2 1 Peptidase S24-like DUF1317 PF07026.11 gi|14521681|ref|NP_127157.1| - 0.13 12.1 0.3 5.3 6.9 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1317) DUF1573 PF07610.11 gi|14521682|ref|NP_127158.1| - 0.012 15.6 0.4 0.02 14.9 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1573) DUF5305 PF17231.2 gi|14521683|ref|NP_127159.1| - 1.7e-08 34.1 3.8 2.7e-05 23.7 2.5 2.6 2 1 0 2 2 2 1 Family of unknown function (DUF5305) CARDB PF07705.11 gi|14521684|ref|NP_127160.1| - 5.2e-05 23.4 6.1 5.6e-05 23.3 0.0 2.9 2 1 0 2 2 2 1 CARDB DUF5305 PF17231.2 gi|14521684|ref|NP_127160.1| - 0.018 14.5 5.5 0.034 13.6 5.5 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF5383 PF17355.2 gi|14521684|ref|NP_127160.1| - 0.085 13.2 1.0 0.17 12.2 1.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Cupredoxin_1 PF13473.6 gi|14521684|ref|NP_127160.1| - 0.44 10.7 5.2 2 8.6 3.4 2.6 2 0 0 2 2 2 0 Cupredoxin-like domain T2SSF PF00482.23 gi|14521685|ref|NP_127161.1| - 2.6e-18 66.2 11.1 1.9e-09 37.5 0.4 3.8 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F T2SSE PF00437.20 gi|14521686|ref|NP_127162.1| - 2.1e-48 164.7 0.0 3.3e-48 164.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|14521686|ref|NP_127162.1| - 0.018 14.8 0.1 0.041 13.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|14521686|ref|NP_127162.1| - 0.085 13.2 0.0 2.5 8.5 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 gi|14521686|ref|NP_127162.1| - 0.1 13.1 0.0 0.29 11.6 0.0 1.7 1 0 0 1 1 1 0 ABC transporter DEAD PF00270.29 gi|14521686|ref|NP_127162.1| - 0.11 12.3 0.1 0.59 9.9 0.0 2.0 2 0 0 2 2 2 0 DEAD/DEAH box helicase FtsK_SpoIIIE PF01580.18 gi|14521686|ref|NP_127162.1| - 0.12 11.7 0.0 0.23 10.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Microtub_bd PF16796.5 gi|14521686|ref|NP_127162.1| - 0.12 12.3 0.0 0.34 10.9 0.0 1.7 1 0 0 1 1 1 0 Microtubule binding AAA_22 PF13401.6 gi|14521686|ref|NP_127162.1| - 0.14 12.4 0.0 0.39 11.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|14521686|ref|NP_127162.1| - 0.76 10.2 3.5 1.2 9.6 0.8 2.2 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|14521687|ref|NP_127163.1| - 7.5e-17 61.5 0.0 9.8e-17 61.1 0.0 1.1 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 gi|14521687|ref|NP_127163.1| - 0.00038 19.8 0.1 0.00068 19.0 0.1 1.4 1 0 0 1 1 1 1 Rad51 AAA_18 PF13238.6 gi|14521687|ref|NP_127163.1| - 0.0011 19.6 0.1 0.0035 17.9 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|14521687|ref|NP_127163.1| - 0.0023 17.5 0.1 0.22 11.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|14521687|ref|NP_127163.1| - 0.0074 16.3 0.1 0.021 14.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|14521687|ref|NP_127163.1| - 0.0081 16.1 1.0 0.045 13.7 1.0 1.9 1 1 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 gi|14521687|ref|NP_127163.1| - 0.023 15.1 0.0 0.032 14.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DUF2075 PF09848.9 gi|14521687|ref|NP_127163.1| - 0.033 13.4 0.0 0.035 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 gi|14521687|ref|NP_127163.1| - 0.037 14.4 0.0 0.12 12.8 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|14521687|ref|NP_127163.1| - 0.062 13.3 0.2 0.26 11.3 0.2 2.0 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|14521687|ref|NP_127163.1| - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|14521687|ref|NP_127163.1| - 0.08 12.5 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ELP6 PF09807.9 gi|14521687|ref|NP_127163.1| - 0.087 12.2 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Elongation complex protein 6 AAA_22 PF13401.6 gi|14521687|ref|NP_127163.1| - 0.09 13.1 0.1 0.19 12.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|14521687|ref|NP_127163.1| - 0.21 11.3 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain PAXNEB PF05625.11 gi|14521687|ref|NP_127163.1| - 0.23 10.6 0.5 0.42 9.7 0.0 1.6 2 0 0 2 2 2 0 PAXNEB protein Arch_flagellin PF01917.16 gi|14521688|ref|NP_127164.1| - 4.1e-24 85.6 0.6 5e-24 85.3 0.6 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin HIRA_B PF09453.10 gi|14521688|ref|NP_127164.1| - 0.094 12.6 0.3 0.18 11.7 0.3 1.4 1 0 0 1 1 1 0 HIRA B motif Arch_fla_DE PF04659.13 gi|14521690|ref|NP_127166.1| - 7.2e-30 102.7 0.0 3e-29 100.7 0.0 2.1 1 0 0 1 1 1 1 Archaeal flagella protein AAA_13 PF13166.6 gi|14521690|ref|NP_127166.1| - 1.6e-05 23.8 23.0 2.5e-05 23.2 23.0 1.2 1 0 0 1 1 1 1 AAA domain HSBP1 PF06825.12 gi|14521690|ref|NP_127166.1| - 6.2e-05 22.8 7.0 0.52 10.2 0.9 4.6 3 1 1 4 4 4 3 Heat shock factor binding protein 1 NPV_P10 PF05531.12 gi|14521690|ref|NP_127166.1| - 0.00076 19.9 21.4 0.017 15.6 0.9 5.5 2 1 3 5 5 4 2 Nucleopolyhedrovirus P10 protein FliD_C PF07195.12 gi|14521690|ref|NP_127166.1| - 0.0025 17.3 5.4 0.1 12.0 0.6 2.2 1 1 1 2 2 2 2 Flagellar hook-associated protein 2 C-terminus STAT_alpha PF01017.20 gi|14521690|ref|NP_127166.1| - 0.0062 16.5 7.4 0.0062 16.5 7.4 3.2 3 2 1 4 4 3 1 STAT protein, all-alpha domain Baculo_PEP_C PF04513.12 gi|14521690|ref|NP_127166.1| - 0.0075 16.3 1.0 0.14 12.2 0.6 2.7 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Nsp1_C PF05064.13 gi|14521690|ref|NP_127166.1| - 0.016 15.0 0.2 0.016 15.0 0.2 4.3 3 1 2 5 5 5 0 Nsp1-like C-terminal region FUSC PF04632.12 gi|14521690|ref|NP_127166.1| - 0.023 13.3 0.3 0.04 12.5 0.3 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein family TelA PF05816.11 gi|14521690|ref|NP_127166.1| - 0.047 12.8 22.5 0.014 14.4 11.5 2.3 1 1 1 2 2 2 0 Toxic anion resistance protein (TelA) MbeD_MobD PF04899.12 gi|14521690|ref|NP_127166.1| - 0.05 13.7 0.9 1.1 9.5 0.1 3.0 2 1 0 2 2 2 0 MbeD/MobD like Salt_tol_Pase PF09506.10 gi|14521690|ref|NP_127166.1| - 0.051 12.3 0.8 0.081 11.7 0.8 1.4 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) RmuC PF02646.16 gi|14521690|ref|NP_127166.1| - 0.056 12.6 19.5 0.53 9.4 0.6 3.3 1 1 2 3 3 3 0 RmuC family BLOC1_2 PF10046.9 gi|14521690|ref|NP_127166.1| - 0.063 13.6 24.4 5.6 7.3 7.0 4.8 2 1 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin_2 PF14523.6 gi|14521690|ref|NP_127166.1| - 0.072 13.5 8.1 3.4 8.1 0.4 3.2 1 1 2 3 3 3 0 Syntaxin-like protein Exonuc_VII_L PF02601.15 gi|14521690|ref|NP_127166.1| - 0.073 12.6 11.3 0.2 11.2 11.3 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Spc7 PF08317.11 gi|14521690|ref|NP_127166.1| - 0.08 11.8 40.9 0.071 12.0 28.9 2.5 1 1 1 2 2 2 0 Spc7 kinetochore protein VBS PF08913.10 gi|14521690|ref|NP_127166.1| - 0.081 13.4 1.4 0.31 11.5 1.4 2.1 1 1 0 1 1 1 0 Vinculin Binding Site LPP PF04728.13 gi|14521690|ref|NP_127166.1| - 0.13 12.7 10.5 0.91 10.0 0.3 4.3 4 1 0 4 4 2 0 Lipoprotein leucine-zipper DUF5104 PF17117.5 gi|14521690|ref|NP_127166.1| - 0.18 12.3 2.4 13 6.2 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5104) PAX PF00292.18 gi|14521690|ref|NP_127166.1| - 0.19 11.7 0.5 2 8.3 0.0 2.8 3 0 0 3 3 3 0 'Paired box' domain KxDL PF10241.9 gi|14521690|ref|NP_127166.1| - 0.2 11.9 11.7 0.4 11.0 1.4 4.0 2 1 2 4 4 4 0 Uncharacterized conserved protein Cytochrom_B562 PF07361.11 gi|14521690|ref|NP_127166.1| - 0.24 12.1 15.9 0.044 14.4 8.5 3.1 1 1 2 3 3 3 0 Cytochrome b562 Occludin_ELL PF07303.13 gi|14521690|ref|NP_127166.1| - 0.27 12.0 21.1 1.6 9.5 0.6 3.9 2 1 3 5 5 4 0 Occludin homology domain WXG100 PF06013.12 gi|14521690|ref|NP_127166.1| - 0.34 11.2 2.1 6.5 7.1 0.0 3.5 2 2 1 3 3 3 0 Proteins of 100 residues with WXG Laminin_II PF06009.12 gi|14521690|ref|NP_127166.1| - 0.4 10.7 23.1 0.065 13.3 11.5 3.3 2 1 1 3 3 2 0 Laminin Domain II DUF4363 PF14276.6 gi|14521690|ref|NP_127166.1| - 0.41 10.8 18.1 0.35 11.0 8.0 3.7 2 2 0 2 2 2 0 Domain of unknown function (DUF4363) DUF4407 PF14362.6 gi|14521690|ref|NP_127166.1| - 0.56 9.5 12.8 0.94 8.8 12.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TipAS PF07739.13 gi|14521690|ref|NP_127166.1| - 0.57 10.7 16.2 3 8.4 6.8 2.9 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain FlxA PF14282.6 gi|14521690|ref|NP_127166.1| - 0.69 9.9 14.5 3.4 7.7 6.7 2.8 1 1 1 2 2 2 0 FlxA-like protein T3SSipB PF16535.5 gi|14521690|ref|NP_127166.1| - 0.71 10.3 13.4 0.19 12.2 4.9 2.6 1 1 1 2 2 2 0 Type III cell invasion protein SipB Prominin PF05478.11 gi|14521690|ref|NP_127166.1| - 0.77 7.6 13.4 1.7 6.5 13.2 1.6 1 1 0 1 1 1 0 Prominin Baculo_p24 PF05073.12 gi|14521690|ref|NP_127166.1| - 0.88 9.3 8.3 1.9 8.2 1.9 2.7 1 1 1 2 2 2 0 Baculovirus P24 capsid protein 3-PAP PF12578.8 gi|14521690|ref|NP_127166.1| - 1.1 9.0 6.8 16 5.3 0.1 4.1 3 1 1 4 4 4 0 Myotubularin-associated protein DUF948 PF06103.11 gi|14521690|ref|NP_127166.1| - 1.3 9.4 11.4 1.2e+03 -0.2 10.0 3.9 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FliD_N PF02465.18 gi|14521690|ref|NP_127166.1| - 1.5 9.6 6.5 1.4 9.6 1.3 2.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF1664 PF07889.12 gi|14521690|ref|NP_127166.1| - 2.2 8.3 26.5 1.4 8.9 1.5 4.1 2 1 2 4 4 3 0 Protein of unknown function (DUF1664) SLATT_6 PF18169.1 gi|14521690|ref|NP_127166.1| - 2.5 7.7 6.6 2 8.0 0.9 2.5 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 Spectrin PF00435.21 gi|14521690|ref|NP_127166.1| - 2.8 8.5 32.6 0.082 13.4 10.8 4.6 1 1 3 4 4 4 0 Spectrin repeat ECH_2 PF16113.5 gi|14521690|ref|NP_127166.1| - 3.4 7.1 19.3 3.6 7.0 5.1 3.1 2 1 2 4 4 4 0 Enoyl-CoA hydratase/isomerase Nup54 PF13874.6 gi|14521690|ref|NP_127166.1| - 3.5 7.7 15.0 2.5e+02 1.7 15.0 2.8 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TMPIT PF07851.13 gi|14521690|ref|NP_127166.1| - 4.3 6.5 21.1 1.1 8.4 5.5 2.3 1 1 1 2 2 2 0 TMPIT-like protein Atg14 PF10186.9 gi|14521690|ref|NP_127166.1| - 4.7 6.2 21.6 4 6.4 8.9 2.2 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 RdRP_3 PF00998.23 gi|14521690|ref|NP_127166.1| - 5.9 5.5 7.2 8.7 4.9 7.2 1.2 1 0 0 1 1 1 0 Viral RNA dependent RNA polymerase MtrG PF04210.13 gi|14521690|ref|NP_127166.1| - 7.2 6.5 17.6 5.8 6.9 0.8 5.4 3 1 2 5 5 5 0 Tetrahydromethanopterin S-methyltransferase, subunit G Hemagglutinin PF00509.18 gi|14521690|ref|NP_127166.1| - 9.8 4.4 7.9 43 2.3 5.2 2.3 1 1 1 2 2 2 0 Haemagglutinin FlaC_arch PF05377.11 gi|14521691|ref|NP_127167.1| - 8.3e-20 70.9 24.5 3.1e-19 69.1 4.8 3.4 3 1 0 3 3 3 2 Flagella accessory protein C (FlaC) Laminin_II PF06009.12 gi|14521691|ref|NP_127167.1| - 2.1e-06 27.8 12.7 8.6e-06 25.8 12.7 1.8 1 1 0 1 1 1 1 Laminin Domain II DUF1664 PF07889.12 gi|14521691|ref|NP_127167.1| - 2.2e-05 24.5 14.8 0.0046 17.0 7.0 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 gi|14521691|ref|NP_127167.1| - 4.4e-05 23.7 14.9 0.015 15.6 6.0 2.6 1 1 1 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sec34 PF04136.15 gi|14521691|ref|NP_127167.1| - 0.00011 22.2 6.2 0.00094 19.1 6.3 2.0 1 1 0 1 1 1 1 Sec34-like family IFT57 PF10498.9 gi|14521691|ref|NP_127167.1| - 0.00013 21.0 15.3 0.00018 20.6 15.3 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 CENP-F_leu_zip PF10473.9 gi|14521691|ref|NP_127167.1| - 0.00016 21.7 23.7 0.012 15.6 17.6 2.2 1 1 1 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 LPP PF04728.13 gi|14521691|ref|NP_127167.1| - 0.00017 21.9 7.5 0.015 15.7 0.4 3.3 1 1 1 3 3 3 1 Lipoprotein leucine-zipper RmuC PF02646.16 gi|14521691|ref|NP_127167.1| - 0.00081 18.6 8.5 0.0095 15.1 0.9 2.2 1 1 1 2 2 2 2 RmuC family Baculo_PEP_C PF04513.12 gi|14521691|ref|NP_127167.1| - 0.001 19.1 5.4 0.011 15.7 5.3 2.1 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 gi|14521691|ref|NP_127167.1| - 0.0012 17.2 18.4 0.0075 14.5 18.6 1.8 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA TssO PF17561.2 gi|14521691|ref|NP_127167.1| - 0.0016 18.6 13.8 0.0029 17.7 13.8 1.5 1 0 0 1 1 1 1 Type VI secretion system, TssO Spc7 PF08317.11 gi|14521691|ref|NP_127167.1| - 0.0022 17.0 23.0 0.02 13.8 15.5 2.0 1 1 1 2 2 2 2 Spc7 kinetochore protein COG5 PF10392.9 gi|14521691|ref|NP_127167.1| - 0.003 17.7 8.9 0.13 12.5 1.2 2.3 1 1 1 2 2 2 2 Golgi transport complex subunit 5 FPP PF05911.11 gi|14521691|ref|NP_127167.1| - 0.0031 15.8 17.8 0.0039 15.5 17.8 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil DUF4201 PF13870.6 gi|14521691|ref|NP_127167.1| - 0.0031 17.2 15.4 0.0035 17.1 13.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) GAS PF13851.6 gi|14521691|ref|NP_127167.1| - 0.0046 16.3 8.1 0.0046 16.3 8.1 2.1 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding TolA_bind_tri PF16331.5 gi|14521691|ref|NP_127167.1| - 0.0091 16.1 17.6 0.011 15.8 2.7 3.0 1 1 1 2 2 2 1 TolA binding protein trimerisation Gp58 PF07902.11 gi|14521691|ref|NP_127167.1| - 0.0093 14.3 5.1 0.015 13.6 5.2 1.3 1 1 0 1 1 1 1 gp58-like protein DUF4140 PF13600.6 gi|14521691|ref|NP_127167.1| - 0.012 16.0 15.3 0.11 12.9 1.0 2.9 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Tektin PF03148.14 gi|14521691|ref|NP_127167.1| - 0.012 14.4 15.1 0.34 9.6 8.4 2.0 1 1 1 2 2 2 0 Tektin family Prominin PF05478.11 gi|14521691|ref|NP_127167.1| - 0.015 13.3 7.5 0.022 12.7 7.5 1.3 1 0 0 1 1 1 0 Prominin Vps54_N PF10475.9 gi|14521691|ref|NP_127167.1| - 0.016 14.5 10.7 0.093 12.0 3.3 2.1 1 1 1 2 2 2 0 Vacuolar-sorting protein 54, of GARP complex MscS_porin PF12795.7 gi|14521691|ref|NP_127167.1| - 0.016 14.8 15.3 0.19 11.2 15.4 2.1 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain DUF2730 PF10805.8 gi|14521691|ref|NP_127167.1| - 0.017 15.2 12.6 0.48 10.5 6.6 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) DUF2203 PF09969.9 gi|14521691|ref|NP_127167.1| - 0.019 15.7 12.5 0.036 14.8 3.0 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) NPV_P10 PF05531.12 gi|14521691|ref|NP_127167.1| - 0.021 15.3 11.9 1.2e+02 3.2 11.9 2.9 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF745 PF05335.13 gi|14521691|ref|NP_127167.1| - 0.021 14.5 8.7 0.028 14.2 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) NYD-SP28_assoc PF14775.6 gi|14521691|ref|NP_127167.1| - 0.024 14.7 0.7 0.024 14.7 0.7 2.6 2 1 1 3 3 1 0 Sperm tail C-terminal domain UPF0242 PF06785.11 gi|14521691|ref|NP_127167.1| - 0.03 14.4 16.8 0.039 14.1 16.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF812 PF05667.11 gi|14521691|ref|NP_127167.1| - 0.033 13.1 21.9 0.1 11.5 22.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF1192 PF06698.11 gi|14521691|ref|NP_127167.1| - 0.034 14.2 15.3 0.045 13.8 2.4 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) Seryl_tRNA_N PF02403.22 gi|14521691|ref|NP_127167.1| - 0.035 14.3 20.5 0.11 12.7 2.4 2.6 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain V-SNARE_C PF12352.8 gi|14521691|ref|NP_127167.1| - 0.036 14.4 4.6 0.14 12.4 0.1 2.8 2 1 1 3 3 2 0 Snare region anchored in the vesicle membrane C-terminus DUF948 PF06103.11 gi|14521691|ref|NP_127167.1| - 0.037 14.3 6.2 1.1 9.5 2.0 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) ISG65-75 PF11727.8 gi|14521691|ref|NP_127167.1| - 0.041 13.1 5.9 0.029 13.6 2.9 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein DLP_helical PF18709.1 gi|14521691|ref|NP_127167.1| - 0.042 13.0 13.7 0.096 11.9 3.1 2.2 1 1 1 2 2 2 0 Dynamin-like helical domain FapA PF03961.13 gi|14521691|ref|NP_127167.1| - 0.043 12.4 18.4 0.46 9.0 1.2 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A Fungal_trans_2 PF11951.8 gi|14521691|ref|NP_127167.1| - 0.045 12.6 2.6 0.058 12.2 2.6 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain MCPsignal PF00015.21 gi|14521691|ref|NP_127167.1| - 0.045 13.6 9.4 0.065 13.0 7.5 1.9 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Phage_GPO PF05929.11 gi|14521691|ref|NP_127167.1| - 0.047 13.3 10.2 0.074 12.7 1.6 2.0 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase Atg14 PF10186.9 gi|14521691|ref|NP_127167.1| - 0.055 12.5 16.8 0.35 9.9 17.1 1.7 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fez1 PF06818.15 gi|14521691|ref|NP_127167.1| - 0.056 13.9 16.5 0.1 13.1 16.5 1.4 1 1 0 1 1 1 0 Fez1 Dynein_C PF18199.1 gi|14521691|ref|NP_127167.1| - 0.057 12.6 4.5 0.078 12.2 4.5 1.2 1 0 0 1 1 1 0 Dynein heavy chain C-terminal domain TMPIT PF07851.13 gi|14521691|ref|NP_127167.1| - 0.06 12.6 11.9 0.043 13.1 10.0 1.7 1 1 1 2 2 2 0 TMPIT-like protein HMMR_N PF15905.5 gi|14521691|ref|NP_127167.1| - 0.063 12.7 22.3 0.091 12.2 22.3 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal HemX PF04375.14 gi|14521691|ref|NP_127167.1| - 0.064 12.5 12.1 0.033 13.5 3.4 2.0 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DASH_Dam1 PF08653.10 gi|14521691|ref|NP_127167.1| - 0.065 13.0 4.0 2.7 7.8 0.1 3.3 2 1 1 3 3 3 0 DASH complex subunit Dam1 Exonuc_VII_L PF02601.15 gi|14521691|ref|NP_127167.1| - 0.067 12.8 7.9 0.1 12.2 7.9 1.3 1 1 0 1 1 1 0 Exonuclease VII, large subunit WXG100 PF06013.12 gi|14521691|ref|NP_127167.1| - 0.079 13.2 4.9 4.4 7.6 1.7 3.2 1 1 1 2 2 2 0 Proteins of 100 residues with WXG COG2 PF06148.11 gi|14521691|ref|NP_127167.1| - 0.08 13.0 12.6 0.18 11.9 1.3 3.0 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4618 PF15397.6 gi|14521691|ref|NP_127167.1| - 0.081 12.3 19.1 0.18 11.2 2.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF1917 PF08939.10 gi|14521691|ref|NP_127167.1| - 0.084 12.8 6.1 0.11 12.4 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1917) FlxA PF14282.6 gi|14521691|ref|NP_127167.1| - 0.086 12.8 22.7 0.41 10.6 8.3 2.5 1 1 1 2 2 2 0 FlxA-like protein DUF2205 PF10224.9 gi|14521691|ref|NP_127167.1| - 0.087 12.8 15.6 0.23 11.5 1.5 2.3 1 1 1 2 2 2 0 Short coiled-coil protein CorA PF01544.18 gi|14521691|ref|NP_127167.1| - 0.09 12.1 8.9 0.11 11.7 8.9 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein KxDL PF10241.9 gi|14521691|ref|NP_127167.1| - 0.091 13.0 7.6 0.29 11.5 1.1 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein ACR_tran PF00873.19 gi|14521691|ref|NP_127167.1| - 0.096 10.3 6.2 0.11 10.1 6.2 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Cob_adeno_trans PF01923.18 gi|14521691|ref|NP_127167.1| - 0.1 12.7 9.3 0.27 11.4 5.0 2.3 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Med30 PF11315.8 gi|14521691|ref|NP_127167.1| - 0.11 12.7 12.4 0.16 12.1 12.4 1.4 1 0 0 1 1 1 0 Mediator complex subunit 30 TSC22 PF01166.18 gi|14521691|ref|NP_127167.1| - 0.11 12.8 1.0 0.11 12.8 1.0 3.9 1 1 2 3 3 2 0 TSC-22/dip/bun family Nup88 PF10168.9 gi|14521691|ref|NP_127167.1| - 0.12 10.2 15.1 0.15 9.9 15.1 1.1 1 0 0 1 1 1 0 Nuclear pore component Fib_alpha PF08702.10 gi|14521691|ref|NP_127167.1| - 0.14 12.4 17.2 0.15 12.3 15.1 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family T3SS_needle_E PF08988.10 gi|14521691|ref|NP_127167.1| - 0.15 12.2 4.8 5.7 7.2 0.6 3.0 2 1 1 3 3 3 0 Type III secretion system, cytoplasmic E component of needle NAS PF03059.16 gi|14521691|ref|NP_127167.1| - 0.16 11.3 3.3 1.7 7.9 0.5 2.1 1 1 1 2 2 2 0 Nicotianamine synthase protein CK2S PF15011.6 gi|14521691|ref|NP_127167.1| - 0.17 11.8 8.9 1.5 8.7 6.1 2.6 1 1 1 2 2 2 0 Casein Kinase 2 substrate Phage_HK97_TLTM PF06120.11 gi|14521691|ref|NP_127167.1| - 0.17 11.0 11.9 0.32 10.2 12.0 1.5 1 1 0 1 1 1 0 Tail length tape measure protein Tweety PF04906.13 gi|14521691|ref|NP_127167.1| - 0.18 10.4 5.5 0.065 11.9 2.3 1.7 1 1 1 2 2 2 0 Tweety Prefoldin PF02996.17 gi|14521691|ref|NP_127167.1| - 0.18 11.7 18.4 0.12 12.3 1.3 3.2 2 1 1 3 3 3 0 Prefoldin subunit DUF3450 PF11932.8 gi|14521691|ref|NP_127167.1| - 0.19 11.0 15.1 1.2 8.4 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Bacillus_HBL PF05791.11 gi|14521691|ref|NP_127167.1| - 0.19 11.6 8.2 0.38 10.6 6.9 1.9 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Hemagglutinin PF00509.18 gi|14521691|ref|NP_127167.1| - 0.22 9.9 6.0 0.3 9.4 6.0 1.2 1 0 0 1 1 1 0 Haemagglutinin BRE1 PF08647.11 gi|14521691|ref|NP_127167.1| - 0.22 11.6 14.2 0.16 12.0 10.8 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase YabA PF06156.13 gi|14521691|ref|NP_127167.1| - 0.23 12.1 15.0 1.3 9.7 5.7 2.9 1 1 2 3 3 2 0 Initiation control protein YabA Serine_rich PF08824.10 gi|14521691|ref|NP_127167.1| - 0.24 11.4 3.6 2.2 8.3 3.7 2.3 1 1 0 1 1 1 0 Serine rich protein interaction domain DUF5082 PF16888.5 gi|14521691|ref|NP_127167.1| - 0.24 11.7 17.7 1.3 9.3 17.3 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) ATG16 PF08614.11 gi|14521691|ref|NP_127167.1| - 0.25 11.6 13.4 7 6.8 12.9 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF4094 PF13334.6 gi|14521691|ref|NP_127167.1| - 0.25 11.8 14.3 0.44 11.0 1.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Syntaxin_2 PF14523.6 gi|14521691|ref|NP_127167.1| - 0.27 11.6 13.8 4.1 7.8 13.1 2.5 1 1 1 2 2 2 0 Syntaxin-like protein Prefoldin_2 PF01920.20 gi|14521691|ref|NP_127167.1| - 0.27 11.2 25.0 1.2 9.1 14.1 3.4 1 1 1 2 2 2 0 Prefoldin subunit AAA_13 PF13166.6 gi|14521691|ref|NP_127167.1| - 0.27 9.8 16.2 0.95 8.0 16.2 1.6 1 1 0 1 1 1 0 AAA domain Packaging_FI PF14000.6 gi|14521691|ref|NP_127167.1| - 0.28 11.7 8.3 1.2 9.6 0.1 2.8 2 1 1 3 3 2 0 DNA packaging protein FI SpecificRecomb PF10136.9 gi|14521691|ref|NP_127167.1| - 0.32 9.2 3.1 0.4 8.9 3.1 1.1 1 0 0 1 1 1 0 Site-specific recombinase DivIC PF04977.15 gi|14521691|ref|NP_127167.1| - 0.34 10.7 16.2 0.65 9.8 0.3 3.2 2 1 1 3 3 3 0 Septum formation initiator Syntaxin-6_N PF09177.11 gi|14521691|ref|NP_127167.1| - 0.35 11.4 13.0 4.2 8.0 12.8 2.5 1 1 0 1 1 1 0 Syntaxin 6, N-terminal HIP1_clath_bdg PF16515.5 gi|14521691|ref|NP_127167.1| - 0.36 11.5 17.3 3.1 8.4 1.8 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Occludin_ELL PF07303.13 gi|14521691|ref|NP_127167.1| - 0.37 11.5 13.5 0.2 12.4 4.7 2.3 1 1 1 2 2 2 0 Occludin homology domain Med4 PF10018.9 gi|14521691|ref|NP_127167.1| - 0.42 10.3 20.0 0.12 12.0 2.6 3.2 1 1 2 3 3 3 0 Vitamin-D-receptor interacting Mediator subunit 4 Laminin_I PF06008.14 gi|14521691|ref|NP_127167.1| - 0.42 10.3 13.9 0.96 9.1 13.7 1.6 1 1 0 1 1 1 0 Laminin Domain I Fzo_mitofusin PF04799.13 gi|14521691|ref|NP_127167.1| - 0.43 10.1 12.5 1.2 8.6 5.4 2.3 1 1 1 2 2 2 0 fzo-like conserved region Med9 PF07544.13 gi|14521691|ref|NP_127167.1| - 0.44 10.7 18.1 0.74 9.9 0.7 3.2 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 RPW8 PF05659.11 gi|14521691|ref|NP_127167.1| - 0.46 10.2 11.5 0.24 11.1 4.6 2.2 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MAD PF05557.13 gi|14521691|ref|NP_127167.1| - 0.46 8.8 21.9 0.22 9.8 17.4 1.8 1 1 0 1 1 1 0 Mitotic checkpoint protein SKA1 PF07160.12 gi|14521691|ref|NP_127167.1| - 0.46 10.3 15.1 1.2 8.9 6.3 2.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 HPPK PF01288.20 gi|14521691|ref|NP_127167.1| - 0.48 11.0 3.8 2 9.0 0.5 2.1 1 1 1 2 2 2 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APG6_N PF17675.1 gi|14521691|ref|NP_127167.1| - 0.5 10.9 23.0 1.9 9.0 13.8 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region ATPase PF06745.13 gi|14521691|ref|NP_127167.1| - 0.5 9.7 11.0 0.35 10.2 5.9 2.0 1 1 1 2 2 2 0 KaiC DUF4795 PF16043.5 gi|14521691|ref|NP_127167.1| - 0.51 9.9 19.0 1 8.9 12.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Allexi_40kDa PF05549.11 gi|14521691|ref|NP_127167.1| - 0.52 9.8 8.9 0.75 9.3 7.2 1.8 1 1 1 2 2 2 0 Allexivirus 40kDa protein TPR_MLP1_2 PF07926.12 gi|14521691|ref|NP_127167.1| - 0.55 10.3 17.8 0.029 14.4 6.7 2.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Uso1_p115_C PF04871.13 gi|14521691|ref|NP_127167.1| - 0.64 10.4 16.7 0.77 10.1 5.4 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region XhlA PF10779.9 gi|14521691|ref|NP_127167.1| - 0.66 10.2 16.4 0.7 10.1 8.4 3.0 2 1 1 3 3 3 0 Haemolysin XhlA DUF211 PF02680.14 gi|14521691|ref|NP_127167.1| - 0.71 10.1 6.4 0.89 9.8 2.0 2.2 1 1 0 2 2 2 0 Uncharacterized ArCR, COG1888 HalX PF08663.10 gi|14521691|ref|NP_127167.1| - 0.74 10.2 16.3 0.95 9.8 0.7 3.4 2 1 1 3 3 3 0 HalX domain GrpE PF01025.19 gi|14521691|ref|NP_127167.1| - 0.76 9.4 16.1 1.6 8.4 14.2 2.0 1 1 1 2 2 2 0 GrpE Lectin_N PF03954.14 gi|14521691|ref|NP_127167.1| - 0.83 9.4 7.0 1.6 8.5 2.2 2.2 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Snapin_Pallidin PF14712.6 gi|14521691|ref|NP_127167.1| - 0.91 10.0 15.7 0.49 10.9 5.8 2.3 1 1 1 2 2 2 0 Snapin/Pallidin Fmp27_WPPW PF10359.9 gi|14521691|ref|NP_127167.1| - 0.98 8.2 15.3 1.3 7.8 13.0 2.1 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain CALCOCO1 PF07888.11 gi|14521691|ref|NP_127167.1| - 1 8.1 20.7 2.1 7.1 20.8 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF2321 PF10083.9 gi|14521691|ref|NP_127167.1| - 1.1 8.9 4.3 0.59 9.8 1.9 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) DHR10 PF18595.1 gi|14521691|ref|NP_127167.1| - 1.2 9.2 19.8 0.14 12.2 7.4 2.4 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain DUF4407 PF14362.6 gi|14521691|ref|NP_127167.1| - 1.3 8.3 9.1 6.1 6.1 9.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) LURAP PF14854.6 gi|14521691|ref|NP_127167.1| - 1.5 8.8 6.8 0.98 9.4 0.1 2.2 2 0 0 2 2 2 0 Leucine rich adaptor protein DUF4349 PF14257.6 gi|14521691|ref|NP_127167.1| - 1.6 8.1 12.7 3.2 7.2 5.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) GCN5L1 PF06320.13 gi|14521691|ref|NP_127167.1| - 1.6 8.9 11.5 1.5 9.0 5.6 2.4 1 1 1 2 2 2 0 GCN5-like protein 1 (GCN5L1) Erf4 PF10256.9 gi|14521691|ref|NP_127167.1| - 2.1 8.5 5.4 1.7 8.8 0.6 2.5 1 1 2 3 3 2 0 Golgin subfamily A member 7/ERF4 family DUF3375 PF11855.8 gi|14521691|ref|NP_127167.1| - 2.3 7.1 14.8 0.46 9.3 5.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3375) V_ATPase_I PF01496.19 gi|14521691|ref|NP_127167.1| - 2.5 5.9 15.6 7.3 4.4 15.6 1.6 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cauli_AT PF03233.13 gi|14521691|ref|NP_127167.1| - 2.7 7.9 18.3 4.5 7.2 2.4 2.2 1 1 1 2 2 2 0 Aphid transmission protein IDO PF01231.18 gi|14521691|ref|NP_127167.1| - 2.7 6.7 6.4 1.7 7.3 1.3 2.0 1 1 1 2 2 2 0 Indoleamine 2,3-dioxygenase NinG PF05766.12 gi|14521691|ref|NP_127167.1| - 2.7 7.9 8.1 0.54 10.2 1.8 2.4 2 1 1 3 3 2 0 Bacteriophage Lambda NinG protein SLX9 PF15341.6 gi|14521691|ref|NP_127167.1| - 3 8.2 9.3 7.4 7.0 9.3 1.6 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 FAM76 PF16046.5 gi|14521691|ref|NP_127167.1| - 3.3 7.0 13.5 4.8 6.5 13.5 1.1 1 0 0 1 1 1 0 FAM76 protein USP8_interact PF08941.10 gi|14521691|ref|NP_127167.1| - 4.1 7.2 9.6 7.3 6.4 0.5 2.3 1 1 1 2 2 2 0 USP8 interacting DUF3618 PF12277.8 gi|14521691|ref|NP_127167.1| - 4.6 7.6 12.1 3.6 7.9 0.5 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3618) VSG_B PF13206.6 gi|14521691|ref|NP_127167.1| - 4.7 6.4 9.2 1.8 7.7 4.1 2.1 1 1 1 2 2 2 0 Trypanosomal VSG domain Spc24 PF08286.11 gi|14521691|ref|NP_127167.1| - 5.4 7.3 15.3 8.7e+03 -3.0 15.3 2.8 1 1 0 1 1 0 0 Spc24 subunit of Ndc80 EMP24_GP25L PF01105.24 gi|14521691|ref|NP_127167.1| - 5.9 6.8 14.3 2 8.3 5.8 2.2 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD BST2 PF16716.5 gi|14521691|ref|NP_127167.1| - 6.1 7.5 19.1 6.1 7.5 3.3 3.1 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Cluap1 PF10234.9 gi|14521691|ref|NP_127167.1| - 6.1 6.1 21.0 2.8 7.3 11.8 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 mCpol PF18182.1 gi|14521691|ref|NP_127167.1| - 6.2 7.2 8.5 2.1e+02 2.2 8.5 2.8 1 1 0 1 1 1 0 minimal CRISPR polymerase domain MtrG PF04210.13 gi|14521691|ref|NP_127167.1| - 7 6.6 8.0 40 4.2 4.3 3.2 2 1 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G LMBR1 PF04791.16 gi|14521691|ref|NP_127167.1| - 8 5.2 9.6 10 4.9 9.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein HAUS6_N PF14661.6 gi|14521691|ref|NP_127167.1| - 8.5 5.9 13.3 2.4e+02 1.1 13.3 2.1 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF16 PF01519.16 gi|14521691|ref|NP_127167.1| - 8.9 6.9 18.2 58 4.3 1.4 2.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 HMMR_C PF15908.5 gi|14521691|ref|NP_127167.1| - 9.1 6.5 13.6 0.76 10.0 0.4 3.0 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal Arch_flagellin PF01917.16 gi|14521692|ref|NP_127168.1| - 8.8e-41 139.8 5.3 1.1e-40 139.5 5.3 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|14521693|ref|NP_127169.1| - 8.4e-45 152.9 6.9 9.7e-45 152.7 6.9 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|14521694|ref|NP_127170.1| - 1.4e-29 103.4 8.0 1.6e-29 103.2 8.0 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin TcfC PF16967.5 gi|14521694|ref|NP_127170.1| - 0.059 12.9 0.2 0.12 11.9 0.2 1.5 1 0 0 1 1 1 0 E-set like domain Methyltransf_12 PF08242.12 gi|14521695|ref|NP_127171.1| - 1.3e-13 51.5 0.0 2.8e-13 50.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|14521695|ref|NP_127171.1| - 2.7e-13 50.0 0.0 4.1e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521695|ref|NP_127171.1| - 3.7e-13 50.0 0.0 9.1e-13 48.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521695|ref|NP_127171.1| - 1.1e-11 45.2 0.0 1.9e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521695|ref|NP_127171.1| - 3.2e-11 43.0 0.0 4.7e-10 39.2 0.0 2.0 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|14521695|ref|NP_127171.1| - 4.9e-10 39.5 0.0 7.9e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|14521695|ref|NP_127171.1| - 4.7e-05 23.3 0.0 0.0001 22.1 0.0 1.6 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|14521695|ref|NP_127171.1| - 0.0026 17.4 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|14521695|ref|NP_127171.1| - 0.0073 15.9 0.0 0.016 14.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|14521695|ref|NP_127171.1| - 0.016 14.8 0.0 0.037 13.6 0.0 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW TehB PF03848.14 gi|14521695|ref|NP_127171.1| - 0.051 13.0 0.0 0.081 12.3 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB NNMT_PNMT_TEMT PF01234.17 gi|14521695|ref|NP_127171.1| - 0.084 12.1 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family DUF1495 PF07381.11 gi|14521696|ref|NP_127172.1| - 3.8e-33 113.2 0.7 4.4e-33 113.0 0.7 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) HTH_20 PF12840.7 gi|14521696|ref|NP_127172.1| - 0.04 14.0 0.0 0.068 13.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF505 PF04458.12 gi|14521696|ref|NP_127172.1| - 0.057 11.8 0.1 0.076 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) DUF4364 PF14277.6 gi|14521696|ref|NP_127172.1| - 0.075 12.8 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) HTH_IclR PF09339.10 gi|14521696|ref|NP_127172.1| - 0.078 12.8 0.0 0.89 9.4 0.0 2.3 2 1 0 2 2 2 0 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|14521696|ref|NP_127172.1| - 0.096 12.6 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Csm1_N PF18504.1 gi|14521697|ref|NP_127173.1| - 7.8e-05 22.9 5.1 7.8e-05 22.9 5.1 5.7 4 2 2 6 6 5 1 Csm1 N-terminal domain DUF4507 PF14964.6 gi|14521697|ref|NP_127173.1| - 0.00041 19.4 0.1 0.00041 19.4 0.1 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4507) APG17 PF04108.12 gi|14521697|ref|NP_127173.1| - 0.00099 18.3 22.4 0.21 10.6 14.4 3.6 1 1 0 2 2 2 1 Autophagy protein Apg17 NRBF2 PF08961.10 gi|14521697|ref|NP_127173.1| - 0.0011 18.6 5.1 0.0011 18.6 5.1 2.8 1 1 2 3 3 2 1 Nuclear receptor-binding factor 2, autophagy regulator UPF0449 PF15136.6 gi|14521697|ref|NP_127173.1| - 0.0012 19.2 20.7 0.14 12.6 3.6 3.6 2 1 0 3 3 3 2 Uncharacterised protein family UPF0449 BLOC1_2 PF10046.9 gi|14521697|ref|NP_127173.1| - 0.0016 18.7 28.2 0.1 12.9 3.9 4.4 2 2 1 4 4 4 3 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMPIT PF07851.13 gi|14521697|ref|NP_127173.1| - 0.0046 16.2 19.2 0.046 13.0 0.3 3.1 2 1 1 3 3 3 2 TMPIT-like protein GED PF02212.18 gi|14521697|ref|NP_127173.1| - 0.0046 17.1 6.8 0.0046 17.1 6.8 3.6 2 1 2 4 4 3 1 Dynamin GTPase effector domain DUF1664 PF07889.12 gi|14521697|ref|NP_127173.1| - 0.0051 16.9 22.4 0.087 12.9 2.1 3.8 1 1 2 3 3 3 1 Protein of unknown function (DUF1664) TolA_bind_tri PF16331.5 gi|14521697|ref|NP_127173.1| - 0.0054 16.8 13.1 0.18 11.9 0.4 3.8 3 1 0 3 3 3 1 TolA binding protein trimerisation bZIP_2 PF07716.15 gi|14521697|ref|NP_127173.1| - 0.0063 16.6 4.8 0.0063 16.6 4.8 5.6 4 1 2 6 6 6 1 Basic region leucine zipper RmuC PF02646.16 gi|14521697|ref|NP_127173.1| - 0.0073 15.5 19.8 0.48 9.5 0.4 3.8 3 1 0 3 3 3 1 RmuC family bZIP_1 PF00170.21 gi|14521697|ref|NP_127173.1| - 0.0084 16.2 8.2 0.0084 16.2 8.2 5.5 5 2 2 7 7 5 2 bZIP transcription factor FlaC_arch PF05377.11 gi|14521697|ref|NP_127173.1| - 0.011 16.1 40.6 0.015 15.7 7.5 5.9 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 gi|14521697|ref|NP_127173.1| - 0.013 15.2 3.1 0.013 15.2 3.1 5.1 3 2 2 5 5 5 0 Septum formation initiator YabA PF06156.13 gi|14521697|ref|NP_127173.1| - 0.013 16.1 5.0 0.013 16.1 5.0 5.0 1 1 3 4 4 3 0 Initiation control protein YabA Occludin_ELL PF07303.13 gi|14521697|ref|NP_127173.1| - 0.014 16.1 17.7 0.027 15.2 1.5 4.0 2 1 2 4 4 4 0 Occludin homology domain DUF948 PF06103.11 gi|14521697|ref|NP_127173.1| - 0.015 15.6 14.5 0.87 9.9 0.4 3.8 2 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) ADIP PF11559.8 gi|14521697|ref|NP_127173.1| - 0.015 15.4 22.2 0.42 10.7 1.7 3.6 3 1 0 3 3 3 0 Afadin- and alpha -actinin-Binding Prp19 PF08606.11 gi|14521697|ref|NP_127173.1| - 0.027 14.4 3.6 1.6 8.8 0.0 3.4 3 1 1 4 4 2 0 Prp19/Pso4-like DUF4407 PF14362.6 gi|14521697|ref|NP_127173.1| - 0.032 13.6 9.8 0.01 15.2 4.8 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 gi|14521697|ref|NP_127173.1| - 0.033 13.3 26.7 0.019 14.0 8.5 3.1 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 JIP_LZII PF16471.5 gi|14521697|ref|NP_127173.1| - 0.034 14.3 4.3 0.034 14.3 4.3 4.9 4 2 0 4 4 4 0 JNK-interacting protein leucine zipper II TSC22 PF01166.18 gi|14521697|ref|NP_127173.1| - 0.041 14.2 2.9 0.041 14.2 2.9 6.4 3 1 5 8 8 6 0 TSC-22/dip/bun family CENP-Q PF13094.6 gi|14521697|ref|NP_127173.1| - 0.042 14.1 1.8 0.042 14.1 1.8 3.7 3 1 0 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit Goodbye PF17109.5 gi|14521697|ref|NP_127173.1| - 0.051 14.0 14.8 0.27 11.7 1.6 3.6 2 2 0 3 3 3 0 fungal STAND N-terminal Goodbye domain DUF3800 PF12686.7 gi|14521697|ref|NP_127173.1| - 0.067 13.8 0.2 1.9 9.1 0.2 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) NPV_P10 PF05531.12 gi|14521697|ref|NP_127173.1| - 0.077 13.5 16.4 6.1 7.4 1.8 4.7 1 1 3 4 4 3 0 Nucleopolyhedrovirus P10 protein DivIVA PF05103.13 gi|14521697|ref|NP_127173.1| - 0.1 12.7 30.0 0.12 12.4 6.4 4.3 2 1 3 5 5 5 0 DivIVA protein TPR_MLP1_2 PF07926.12 gi|14521697|ref|NP_127173.1| - 0.11 12.6 29.7 0.23 11.5 1.2 4.0 4 1 0 4 4 4 0 TPR/MLP1/MLP2-like protein Rootletin PF15035.6 gi|14521697|ref|NP_127173.1| - 0.11 12.5 25.1 0.49 10.4 12.3 3.7 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion Baculo_PEP_C PF04513.12 gi|14521697|ref|NP_127173.1| - 0.12 12.5 10.8 2.8 8.0 1.1 3.9 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Spc7 PF08317.11 gi|14521697|ref|NP_127173.1| - 0.12 11.3 36.9 0.067 12.1 18.2 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Snapin_Pallidin PF14712.6 gi|14521697|ref|NP_127173.1| - 0.14 12.6 24.8 0.66 10.4 3.7 4.3 3 1 1 4 4 4 0 Snapin/Pallidin THOC7 PF05615.13 gi|14521697|ref|NP_127173.1| - 0.16 12.2 28.9 2 8.7 1.5 3.6 3 1 0 3 3 3 0 Tho complex subunit 7 Shugoshin_N PF07558.11 gi|14521697|ref|NP_127173.1| - 0.19 11.7 16.7 1.7 8.6 0.9 4.7 4 0 0 4 4 3 0 Shugoshin N-terminal coiled-coil region YojJ PF10372.9 gi|14521697|ref|NP_127173.1| - 0.19 11.9 0.1 0.19 11.9 0.1 4.4 3 2 1 4 4 4 0 Bacterial membrane-spanning protein N-terminus Sec34 PF04136.15 gi|14521697|ref|NP_127173.1| - 0.21 11.5 16.7 2.3 8.1 0.8 3.7 2 2 2 4 4 3 0 Sec34-like family Cas_DxTHG PF09455.10 gi|14521697|ref|NP_127173.1| - 0.24 10.9 28.5 0.21 11.1 18.1 2.1 1 1 1 2 2 2 0 CRISPR-associated (Cas) DxTHG family Med3 PF11593.8 gi|14521697|ref|NP_127173.1| - 0.24 10.5 1.8 0.43 9.7 1.8 1.3 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF3450 PF11932.8 gi|14521697|ref|NP_127173.1| - 0.25 10.6 22.4 0.091 12.0 3.4 3.5 2 1 0 3 3 3 0 Protein of unknown function (DUF3450) MCPsignal PF00015.21 gi|14521697|ref|NP_127173.1| - 0.28 11.0 11.6 0.52 10.1 0.3 3.2 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain LXG PF04740.12 gi|14521697|ref|NP_127173.1| - 0.4 10.3 13.5 0.21 11.3 0.3 3.5 2 1 0 2 2 2 0 LXG domain of WXG superfamily DUF2935 PF11155.8 gi|14521697|ref|NP_127173.1| - 0.44 10.9 15.9 0.49 10.7 0.4 3.7 1 1 0 2 2 2 0 Domain of unknown function (DUF2935) Prominin PF05478.11 gi|14521697|ref|NP_127173.1| - 0.45 8.4 18.4 0.12 10.3 3.0 2.5 1 1 0 2 2 2 0 Prominin DUF16 PF01519.16 gi|14521697|ref|NP_127173.1| - 0.54 10.8 25.8 1.8e+04 -10.9 25.8 3.8 1 1 0 1 1 0 0 Protein of unknown function DUF16 Noelin-1 PF12308.8 gi|14521697|ref|NP_127173.1| - 0.55 10.2 14.1 0.52 10.3 0.5 4.2 2 2 3 5 5 5 0 Neurogenesis glycoprotein TACC_C PF05010.14 gi|14521697|ref|NP_127173.1| - 0.56 10.0 30.9 0.15 11.8 9.3 3.4 1 1 1 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KASH_CCD PF14662.6 gi|14521697|ref|NP_127173.1| - 0.62 9.9 36.7 0.14 12.0 4.8 3.2 2 1 1 3 3 3 0 Coiled-coil region of CCDC155 or KASH Rx_N PF18052.1 gi|14521697|ref|NP_127173.1| - 0.7 10.2 30.9 0.039 14.2 2.9 4.5 4 1 1 5 5 4 0 Rx N-terminal domain SHE3 PF17078.5 gi|14521697|ref|NP_127173.1| - 0.73 9.5 31.0 1.4 8.6 8.2 3.5 1 1 0 3 3 3 0 SWI5-dependent HO expression protein 3 Nup54 PF13874.6 gi|14521697|ref|NP_127173.1| - 0.74 9.9 21.6 2.5 8.2 11.6 3.3 2 2 0 2 2 2 0 Nucleoporin complex subunit 54 LMBR1 PF04791.16 gi|14521697|ref|NP_127173.1| - 0.75 8.6 22.2 0.043 12.7 12.1 2.1 1 1 1 2 2 2 0 LMBR1-like membrane protein CENP-F_leu_zip PF10473.9 gi|14521697|ref|NP_127173.1| - 0.97 9.4 42.4 0.2 11.7 4.8 4.7 2 1 1 3 3 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3567 PF12091.8 gi|14521697|ref|NP_127173.1| - 0.97 9.6 7.0 3.3 7.9 0.2 3.5 4 0 0 4 4 2 0 Protein of unknown function (DUF3567) Leu_zip PF15294.6 gi|14521697|ref|NP_127173.1| - 0.98 8.9 35.0 2.5 7.6 25.5 2.9 1 1 1 2 2 2 0 Leucine zipper Ran-binding PF05508.11 gi|14521697|ref|NP_127173.1| - 1 8.2 28.1 0.37 9.7 1.8 4.0 1 1 3 4 4 4 0 RanGTP-binding protein GIT1_C PF12205.8 gi|14521697|ref|NP_127173.1| - 1.1 9.3 13.3 2.3 8.4 5.4 3.4 1 1 3 4 4 4 0 G protein-coupled receptor kinase-interacting protein 1 C term CSN5_C PF18323.1 gi|14521697|ref|NP_127173.1| - 1.2 10.1 12.2 35 5.4 7.6 3.6 2 2 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain Exonuc_VII_L PF02601.15 gi|14521697|ref|NP_127173.1| - 1.2 8.6 18.7 2.5 7.6 2.6 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit ArsR PF09824.9 gi|14521697|ref|NP_127173.1| - 1.3 8.6 18.5 0.35 10.4 1.2 3.6 2 1 1 3 3 3 0 ArsR transcriptional regulator MtrB PF05440.12 gi|14521697|ref|NP_127173.1| - 1.3 9.5 5.9 2.5 8.6 0.1 3.4 3 2 0 3 3 2 0 Tetrahydromethanopterin S-methyltransferase subunit B ZapB PF06005.12 gi|14521697|ref|NP_127173.1| - 1.6 9.2 37.9 0.099 13.1 8.9 5.3 4 2 0 4 4 4 0 Cell division protein ZapB PI_PP_I PF18363.1 gi|14521697|ref|NP_127173.1| - 1.8 8.8 5.3 7.1 6.9 0.5 3.5 2 1 2 4 4 4 0 Phosphoinositide phosphatase insertion domain Seryl_tRNA_N PF02403.22 gi|14521697|ref|NP_127173.1| - 1.9 8.7 38.3 1.9 8.8 6.4 3.8 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain DASH_Dam1 PF08653.10 gi|14521697|ref|NP_127173.1| - 2.3 8.1 11.8 8.4 6.3 0.2 4.8 5 1 1 6 6 3 0 DASH complex subunit Dam1 Mod_r PF07200.13 gi|14521697|ref|NP_127173.1| - 2.3 8.3 28.9 2 8.5 5.2 3.8 1 1 1 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF4618 PF15397.6 gi|14521697|ref|NP_127173.1| - 2.4 7.5 29.3 0.53 9.7 15.4 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) C9orf72-like PF15019.6 gi|14521697|ref|NP_127173.1| - 3.1 7.3 6.6 1.1 8.8 0.5 2.8 2 1 0 3 3 3 0 C9orf72-like protein family PRKG1_interact PF15898.5 gi|14521697|ref|NP_127173.1| - 3.8 8.5 31.9 1.2 10.1 17.2 4.1 2 2 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Fib_alpha PF08702.10 gi|14521697|ref|NP_127173.1| - 3.9 7.6 23.2 0.44 10.7 3.0 3.6 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family CorA PF01544.18 gi|14521697|ref|NP_127173.1| - 4.1 6.6 21.3 5 6.4 5.4 2.8 1 1 2 3 3 3 0 CorA-like Mg2+ transporter protein FliD_N PF02465.18 gi|14521697|ref|NP_127173.1| - 4.3 8.1 9.6 75 4.1 4.7 3.8 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HALZ PF02183.18 gi|14521697|ref|NP_127173.1| - 4.5 7.6 15.8 1.3 9.3 4.7 3.7 3 1 0 3 3 2 0 Homeobox associated leucine zipper YtxH PF12732.7 gi|14521697|ref|NP_127173.1| - 4.6 7.8 17.9 1.8e+04 -4.2 17.9 4.4 1 1 0 1 1 0 0 YtxH-like protein DUF4446 PF14584.6 gi|14521697|ref|NP_127173.1| - 5.2 7.0 24.7 0.19 11.7 2.8 4.0 1 1 3 4 4 4 0 Protein of unknown function (DUF4446) L31 PF09784.9 gi|14521697|ref|NP_127173.1| - 5.2 7.5 12.7 12 6.4 0.1 3.3 2 1 0 2 2 2 0 Mitochondrial ribosomal protein L31 DUF2203 PF09969.9 gi|14521697|ref|NP_127173.1| - 5.6 7.7 25.0 3.8 8.3 0.7 4.0 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) TraF_2 PF13729.6 gi|14521697|ref|NP_127173.1| - 5.7 6.2 5.1 10 5.4 0.1 2.8 2 1 0 2 2 2 0 F plasmid transfer operon, TraF, protein KxDL PF10241.9 gi|14521697|ref|NP_127173.1| - 5.9 7.3 16.4 16 5.9 1.2 4.2 3 2 1 4 4 4 0 Uncharacterized conserved protein Syntaxin_2 PF14523.6 gi|14521697|ref|NP_127173.1| - 6 7.3 22.3 70 3.9 12.2 4.0 1 1 1 3 3 2 0 Syntaxin-like protein HAP1_N PF04849.13 gi|14521697|ref|NP_127173.1| - 6.7 5.8 34.2 0.66 9.1 20.9 3.3 1 1 2 3 3 3 0 HAP1 N-terminal conserved region NYD-SP28_assoc PF14775.6 gi|14521697|ref|NP_127173.1| - 7.7 6.7 18.8 1.5 8.9 2.4 4.2 5 1 1 6 6 3 0 Sperm tail C-terminal domain DUF2730 PF10805.8 gi|14521697|ref|NP_127173.1| - 8.6 6.5 23.1 3 8.0 4.0 4.4 2 2 1 4 4 4 0 Protein of unknown function (DUF2730) HEAT_UF PF18817.1 gi|14521698|ref|NP_127174.1| - 1.2e-26 92.7 1.5 1.2e-26 92.7 1.5 3.6 4 0 0 4 4 4 1 Repeat of uncharacterized protein PH0542 HEAT_2 PF13646.6 gi|14521698|ref|NP_127174.1| - 1.2e-09 38.4 0.6 0.0006 20.2 0.0 3.3 1 1 1 3 3 3 3 HEAT repeats HEAT PF02985.22 gi|14521698|ref|NP_127174.1| - 2.2e-09 36.7 1.6 4.1e-05 23.5 0.1 4.9 6 0 0 6 6 5 2 HEAT repeat Adaptin_N PF01602.20 gi|14521698|ref|NP_127174.1| - 2.1e-08 33.2 4.6 1.3e-05 24.0 0.6 2.2 1 1 0 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.7 gi|14521698|ref|NP_127174.1| - 4.3e-07 30.1 8.0 0.0053 16.8 0.6 3.1 1 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 gi|14521698|ref|NP_127174.1| - 6.7e-05 23.3 0.6 0.38 11.3 0.0 4.3 1 1 4 5 5 5 1 HEAT-like repeat Vac14_Fab1_bd PF12755.7 gi|14521698|ref|NP_127174.1| - 0.00013 22.5 2.2 0.012 16.2 0.1 3.1 2 2 1 3 3 3 1 Vacuolar 14 Fab1-binding region Proteasom_PSMB PF10508.9 gi|14521698|ref|NP_127174.1| - 0.00027 19.6 2.3 0.015 13.8 0.1 2.1 1 1 0 2 2 2 2 Proteasome non-ATPase 26S subunit DUF5578 PF17741.1 gi|14521698|ref|NP_127174.1| - 0.0019 17.7 1.9 0.036 13.5 0.1 2.1 1 1 1 2 2 2 1 Family of unknown function (DUF5578) DUF3385 PF11865.8 gi|14521698|ref|NP_127174.1| - 0.014 15.3 0.5 4.3 7.2 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF3385) RIX1 PF08167.12 gi|14521698|ref|NP_127174.1| - 0.018 14.8 0.0 0.4 10.4 0.0 2.3 2 0 0 2 2 2 0 rRNA processing/ribosome biogenesis UME PF08064.13 gi|14521698|ref|NP_127174.1| - 0.024 14.5 0.2 0.23 11.4 0.0 2.3 2 0 0 2 2 2 0 UME (NUC010) domain Arm PF00514.23 gi|14521698|ref|NP_127174.1| - 0.039 14.0 0.1 1.7 8.8 0.1 3.2 3 1 1 4 4 4 0 Armadillo/beta-catenin-like repeat DUF2258 PF10015.9 gi|14521698|ref|NP_127174.1| - 0.087 13.0 2.3 0.86 9.8 0.0 3.0 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2258) RTP1_C1 PF10363.9 gi|14521698|ref|NP_127174.1| - 0.13 12.5 1.9 2.8 8.1 0.1 2.8 1 1 1 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 FliG_M PF14841.6 gi|14521698|ref|NP_127174.1| - 0.16 12.2 4.8 1.5 9.1 0.2 3.1 4 0 0 4 4 3 0 FliG middle domain Vitellogenin_N PF01347.22 gi|14521698|ref|NP_127174.1| - 0.45 8.8 2.0 1.5 7.2 0.2 2.0 1 1 1 2 2 2 0 Lipoprotein amino terminal region Orf78 PF06024.12 gi|14521700|ref|NP_127176.1| - 0.04 14.2 0.6 0.064 13.6 0.6 1.3 1 0 0 1 1 1 0 Orf78 (ac78) TMEM131_like PF12371.8 gi|14521700|ref|NP_127176.1| - 0.097 12.9 0.2 0.27 11.5 0.2 1.8 1 0 0 1 1 1 0 Transmembrane protein 131-like DUF4064 PF13273.6 gi|14521700|ref|NP_127176.1| - 0.1 12.9 1.7 0.21 11.9 1.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) AdoHcyase PF05221.17 gi|14521701|ref|NP_127177.1| - 2.6e-66 223.8 0.0 2.4e-36 125.4 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|14521701|ref|NP_127177.1| - 4.2e-52 176.5 0.1 7.1e-52 175.7 0.1 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|14521701|ref|NP_127177.1| - 7.1e-10 38.5 0.1 1.8e-09 37.2 0.1 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|14521701|ref|NP_127177.1| - 2.6e-06 27.1 0.0 4.9e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 gi|14521701|ref|NP_127177.1| - 0.00032 20.6 2.2 0.12 12.3 0.6 2.3 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|14521701|ref|NP_127177.1| - 0.0068 15.7 0.3 0.04 13.2 0.3 2.0 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrkA_N PF02254.18 gi|14521701|ref|NP_127177.1| - 0.013 15.7 0.2 0.05 13.9 0.1 2.0 2 0 0 2 2 2 0 TrkA-N domain Pyr_redox_2 PF07992.14 gi|14521701|ref|NP_127177.1| - 0.021 14.1 0.0 0.037 13.2 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|14521701|ref|NP_127177.1| - 0.078 12.3 2.1 0.27 10.5 2.1 1.9 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NifT PF06988.11 gi|14521701|ref|NP_127177.1| - 0.1 12.4 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 NifT/FixU protein ATPase_2 PF01637.18 gi|14521702|ref|NP_127178.1| - 3e-27 96.0 0.7 7.8e-27 94.7 0.2 2.0 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|14521702|ref|NP_127178.1| - 7.3e-24 84.1 1.3 2.4e-23 82.4 0.7 2.1 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_16 PF13191.6 gi|14521702|ref|NP_127178.1| - 3.1e-11 44.0 1.7 9.2e-10 39.2 1.7 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|14521702|ref|NP_127178.1| - 8.5e-10 38.8 0.0 2.5e-09 37.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|14521702|ref|NP_127178.1| - 2e-08 34.6 0.0 5.4e-08 33.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14521702|ref|NP_127178.1| - 0.0006 20.2 0.0 0.0012 19.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) HTH_24 PF13412.6 gi|14521702|ref|NP_127178.1| - 0.038 13.6 0.1 0.81 9.3 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_42 PF06224.12 gi|14521702|ref|NP_127178.1| - 0.068 12.7 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Hjc PF01870.18 gi|14521702|ref|NP_127178.1| - 0.11 12.4 0.0 0.76 9.8 0.0 2.3 2 0 0 2 2 2 0 Archaeal holliday junction resolvase (hjc) TniB PF05621.11 gi|14521702|ref|NP_127178.1| - 0.14 11.6 0.0 0.91 8.9 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein UPF0102 PF02021.17 gi|14521702|ref|NP_127178.1| - 0.14 12.4 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 Cyclase PF04199.13 gi|14521703|ref|NP_127179.1| - 1.6e-20 73.7 0.0 1.9e-19 70.3 0.0 2.1 1 1 0 1 1 1 1 Putative cyclase DUF150_C PF17384.2 gi|14521703|ref|NP_127179.1| - 0.13 12.4 1.9 0.17 12.0 0.9 1.7 2 0 0 2 2 2 0 RimP C-terminal SH3 domain ATPase_2 PF01637.18 gi|14521705|ref|NP_127181.1| - 2e-19 70.5 1.2 2.3e-19 70.2 0.2 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|14521705|ref|NP_127181.1| - 5.7e-10 39.3 0.1 4.3e-08 33.3 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|14521705|ref|NP_127181.1| - 1.1e-08 35.7 0.5 2.5e-08 34.5 0.1 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|14521705|ref|NP_127181.1| - 4.3e-05 23.8 0.1 0.00014 22.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_35 PF14516.6 gi|14521705|ref|NP_127181.1| - 0.043 12.7 0.3 0.096 11.5 0.1 1.8 2 1 0 2 2 2 0 AAA-like domain AlbA_2 PF04326.14 gi|14521706|ref|NP_127182.1| - 2.3e-19 69.9 0.2 4.5e-19 69.0 0.2 1.5 1 0 0 1 1 1 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|14521706|ref|NP_127182.1| - 1.2e-18 67.0 0.0 2.3e-18 66.1 0.0 1.5 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_5 PF01022.20 gi|14521706|ref|NP_127182.1| - 1.5e-06 28.0 0.6 5.3e-06 26.2 0.6 2.0 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|14521706|ref|NP_127182.1| - 7.6e-05 22.5 0.1 0.00021 21.1 0.1 1.7 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|14521706|ref|NP_127182.1| - 0.0011 19.0 0.2 0.0021 18.1 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|14521706|ref|NP_127182.1| - 0.0012 18.4 0.3 0.0032 17.0 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|14521706|ref|NP_127182.1| - 0.0012 18.7 0.1 0.0029 17.5 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|14521706|ref|NP_127182.1| - 0.012 16.0 0.1 0.032 14.7 0.1 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|14521706|ref|NP_127182.1| - 0.025 14.4 0.0 0.055 13.3 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|14521706|ref|NP_127182.1| - 0.065 13.1 0.9 0.22 11.4 0.9 1.9 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_50 PF18024.1 gi|14521706|ref|NP_127182.1| - 0.072 12.7 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2089 PF09862.9 gi|14521706|ref|NP_127182.1| - 0.094 12.8 0.1 0.18 11.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) YcgR_2 PF12945.7 gi|14521706|ref|NP_127182.1| - 0.13 12.5 0.2 2.5 8.3 0.0 2.7 3 0 0 3 3 3 0 Flagellar protein YcgR Cupin_2 PF07883.11 gi|14521707|ref|NP_127183.1| - 7e-19 67.3 0.1 9.2e-19 66.9 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|14521707|ref|NP_127183.1| - 5.5e-14 52.2 0.0 7.3e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|14521707|ref|NP_127183.1| - 6.3e-08 32.4 0.0 9.5e-08 31.8 0.0 1.3 1 1 0 1 1 1 1 Cupin MannoseP_isomer PF01050.18 gi|14521707|ref|NP_127183.1| - 1.9e-05 24.6 0.0 2.3e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 gi|14521707|ref|NP_127183.1| - 0.00015 21.4 0.0 0.00023 20.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) CENP-C_C PF11699.8 gi|14521707|ref|NP_127183.1| - 0.00026 21.1 0.0 0.00038 20.6 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like AraC_binding_2 PF14525.6 gi|14521707|ref|NP_127183.1| - 0.0018 18.0 0.0 0.002 17.8 0.0 1.1 1 0 0 1 1 1 1 AraC-binding-like domain Asp_Arg_Hydrox PF05118.15 gi|14521707|ref|NP_127183.1| - 0.0062 16.4 0.0 0.0091 15.8 0.0 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Auxin_BP PF02041.16 gi|14521707|ref|NP_127183.1| - 0.02 14.6 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Auxin binding protein Cupin_6 PF12852.7 gi|14521707|ref|NP_127183.1| - 0.079 12.7 0.0 0.084 12.6 0.0 1.1 1 0 0 1 1 1 0 Cupin Ectoine_synth PF06339.12 gi|14521707|ref|NP_127183.1| - 0.14 12.4 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Ectoine synthase Alpha_Helical PF18489.1 gi|14521708|ref|NP_127184.1| - 5.1e-57 191.5 0.2 6.7e-57 191.1 0.2 1.2 1 0 0 1 1 1 1 Alpha helical domain tRNA_bind PF01588.20 gi|14521708|ref|NP_127184.1| - 1.9e-17 63.2 0.1 3.5e-17 62.3 0.1 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain DUF3400 PF11880.8 gi|14521708|ref|NP_127184.1| - 0.082 12.5 0.1 0.16 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) DUF389 PF04087.14 gi|14521708|ref|NP_127184.1| - 0.17 11.9 0.1 0.24 11.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF389) Rad50_zn_hook PF04423.14 gi|33356798|ref|NP_127185.2| - 7.1e-06 25.8 0.4 0.07 13.0 0.2 2.6 2 0 0 2 2 2 2 Rad50 zinc hook motif zf-ribbon_3 PF13248.6 gi|33356798|ref|NP_127185.2| - 9.7e-05 21.6 0.3 0.14 11.6 0.0 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-Di19 PF05605.12 gi|33356798|ref|NP_127185.2| - 0.00081 19.6 0.5 1.6 9.1 0.3 2.2 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding DNA_ligase_ZBD PF03119.16 gi|33356798|ref|NP_127185.2| - 0.00096 19.1 2.0 0.69 10.0 0.0 2.3 2 0 0 2 2 2 2 NAD-dependent DNA ligase C4 zinc finger domain Trm112p PF03966.16 gi|33356798|ref|NP_127185.2| - 0.0015 19.0 0.0 0.0021 18.6 0.0 1.4 1 0 0 1 1 1 1 Trm112p-like protein TF_Zn_Ribbon PF08271.12 gi|33356798|ref|NP_127185.2| - 0.002 17.6 0.1 0.85 9.2 0.0 2.4 2 0 0 2 2 2 1 TFIIB zinc-binding zf-C2H2_4 PF13894.6 gi|33356798|ref|NP_127185.2| - 0.0025 18.5 0.6 0.94 10.5 0.2 2.5 2 0 0 2 2 2 1 C2H2-type zinc finger zf-RRN7 PF11781.8 gi|33356798|ref|NP_127185.2| - 0.013 15.2 0.6 2 8.2 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Prok-RING_1 PF14446.6 gi|33356798|ref|NP_127185.2| - 0.017 15.1 0.3 3 7.9 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zinc_ribbon_2 PF13240.6 gi|33356798|ref|NP_127185.2| - 0.018 14.7 3.3 2.5 7.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 gi|33356798|ref|NP_127185.2| - 0.021 14.5 0.3 2.4 7.9 0.0 2.4 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-C2H2_9 PF16293.5 gi|33356798|ref|NP_127185.2| - 0.022 14.6 1.8 0.71 9.8 0.0 2.8 2 1 0 2 2 2 0 C2H2 type zinc-finger (1 copy) zf-C2H2_6 PF13912.6 gi|33356798|ref|NP_127185.2| - 0.028 14.4 3.1 1 9.4 0.5 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger DUF2256 PF10013.9 gi|33356798|ref|NP_127185.2| - 0.031 14.4 0.5 2.9 8.1 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-TFIIB PF13453.6 gi|33356798|ref|NP_127185.2| - 0.031 13.6 0.2 5.6 6.4 0.0 2.5 2 0 0 2 2 2 0 Transcription factor zinc-finger Mu-like_Com PF10122.9 gi|33356798|ref|NP_127185.2| - 0.038 13.5 1.0 2.1 7.8 0.1 2.6 3 0 0 3 3 3 0 Mu-like prophage protein Com DUF3887 PF13026.6 gi|33356798|ref|NP_127185.2| - 0.039 14.8 0.2 13 6.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3887) zf-ACC PF17848.1 gi|33356798|ref|NP_127185.2| - 0.049 13.7 0.4 6.9 6.8 0.0 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Prim_Zn_Ribbon PF08273.12 gi|33356798|ref|NP_127185.2| - 0.052 13.8 1.4 7.5 6.9 0.1 2.3 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Zn-C2H2_12 PF18112.1 gi|33356798|ref|NP_127185.2| - 0.052 14.0 4.5 1.3 9.6 0.3 2.4 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain DUF1178 PF06676.11 gi|33356798|ref|NP_127185.2| - 0.053 13.9 1.5 0.29 11.5 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1178) DUF2262 PF10020.9 gi|33356798|ref|NP_127185.2| - 0.058 13.8 0.5 7.8 6.9 0.1 2.5 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2262) zf-C4_Topoisom PF01396.19 gi|33356798|ref|NP_127185.2| - 0.058 13.2 0.6 9.7 6.1 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn-ribbon_8 PF09723.10 gi|33356798|ref|NP_127185.2| - 0.059 13.5 2.7 4.2 7.6 0.5 2.4 2 1 0 2 2 2 0 Zinc ribbon domain Cys_rich_CPXG PF14255.6 gi|33356798|ref|NP_127185.2| - 0.11 12.5 0.2 12 5.9 0.0 2.5 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-C2HC_2 PF13913.6 gi|33356798|ref|NP_127185.2| - 0.11 12.4 3.6 1.1 9.3 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-C3HC4_3 PF13920.6 gi|33356798|ref|NP_127185.2| - 0.11 12.3 0.0 13 5.7 0.0 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) CpXC PF14353.6 gi|33356798|ref|NP_127185.2| - 0.15 12.1 1.4 0.55 10.3 1.4 2.1 1 1 0 1 1 1 0 CpXC protein zf-tcix PF14952.6 gi|33356798|ref|NP_127185.2| - 0.16 11.6 2.4 2 8.1 0.1 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-TFIIIC PF12660.7 gi|33356798|ref|NP_127185.2| - 0.18 11.8 0.2 2.3 8.2 0.2 2.1 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex Zn_ribbon_SprT PF17283.2 gi|33356798|ref|NP_127185.2| - 0.19 11.7 1.1 4.5 7.3 0.1 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|33356798|ref|NP_127185.2| - 0.19 11.7 0.3 11 6.0 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-C2H2 PF00096.26 gi|33356798|ref|NP_127185.2| - 0.26 11.8 2.5 8.8 7.0 0.8 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 gi|33356798|ref|NP_127185.2| - 0.26 11.8 4.4 0.82 10.2 0.8 2.2 2 0 0 2 2 2 0 Zinc-finger double domain Elf1 PF05129.13 gi|33356798|ref|NP_127185.2| - 0.28 11.3 1.4 11 6.1 0.3 2.3 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|33356798|ref|NP_127185.2| - 0.3 11.5 2.5 51 4.4 0.1 3.1 3 0 0 3 3 3 0 Restriction alleviation protein Lar DHHA1 PF02272.19 gi|14521710|ref|NP_127186.1| - 2.1e-14 54.1 3.7 7.1e-14 52.4 3.8 1.9 2 1 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|14521710|ref|NP_127186.1| - 8.5e-14 51.6 0.0 2.6e-13 50.1 0.0 1.8 1 1 0 1 1 1 1 DHH family DUF3194 PF11419.8 gi|33356799|ref|NP_127187.2| - 2.4e-28 98.3 6.1 3e-28 98.0 6.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3194) Rubrerythrin PF02915.17 gi|33356799|ref|NP_127187.2| - 0.047 14.1 1.1 0.06 13.7 1.1 1.1 1 0 0 1 1 1 0 Rubrerythrin Prefoldin_2 PF01920.20 gi|14521712|ref|NP_127188.1| - 1.3e-25 89.4 19.8 1.5e-25 89.2 19.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit FPP PF05911.11 gi|14521712|ref|NP_127188.1| - 0.00029 19.2 11.9 0.00036 18.9 11.9 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil ALIX_LYPXL_bnd PF13949.6 gi|14521712|ref|NP_127188.1| - 0.0024 17.2 8.0 0.0032 16.8 8.0 1.1 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV FlaC_arch PF05377.11 gi|14521712|ref|NP_127188.1| - 0.0029 18.0 3.3 0.0029 18.0 3.3 2.6 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) V_ATPase_I PF01496.19 gi|14521712|ref|NP_127188.1| - 0.0062 14.5 5.8 0.0075 14.3 5.8 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF3416 PF11896.8 gi|14521712|ref|NP_127188.1| - 0.0066 16.8 1.3 0.0092 16.3 1.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3416) FTA4 PF13093.6 gi|14521712|ref|NP_127188.1| - 0.007 16.3 8.4 0.0084 16.0 8.4 1.1 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 XhlA PF10779.9 gi|14521712|ref|NP_127188.1| - 0.01 16.0 9.4 0.18 12.1 6.3 2.2 2 0 0 2 2 2 0 Haemolysin XhlA DUF3584 PF12128.8 gi|14521712|ref|NP_127188.1| - 0.015 12.9 8.9 0.017 12.7 8.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Laminin_II PF06009.12 gi|14521712|ref|NP_127188.1| - 0.022 14.8 12.6 0.17 11.9 4.0 2.0 1 1 1 2 2 2 0 Laminin Domain II PilJ PF13675.6 gi|14521712|ref|NP_127188.1| - 0.025 14.6 7.7 0.065 13.3 0.8 2.3 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term TolA_bind_tri PF16331.5 gi|14521712|ref|NP_127188.1| - 0.033 14.3 12.0 0.39 10.8 4.1 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation COG2 PF06148.11 gi|14521712|ref|NP_127188.1| - 0.034 14.2 6.3 1.4 9.0 1.2 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Laminin_I PF06008.14 gi|14521712|ref|NP_127188.1| - 0.035 13.8 17.5 0.21 11.3 6.1 2.0 1 1 0 2 2 2 0 Laminin Domain I HlyD_2 PF12700.7 gi|14521712|ref|NP_127188.1| - 0.044 12.5 7.6 0.062 12.0 7.6 1.2 1 0 0 1 1 1 0 HlyD family secretion protein Bac_GDH PF05088.12 gi|14521712|ref|NP_127188.1| - 0.044 11.3 4.0 0.048 11.2 4.0 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Prominin PF05478.11 gi|14521712|ref|NP_127188.1| - 0.046 11.7 9.2 0.056 11.4 9.2 1.1 1 0 0 1 1 1 0 Prominin DUF2120 PF09893.9 gi|14521712|ref|NP_127188.1| - 0.06 13.4 2.7 0.066 13.3 1.7 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) DHR10 PF18595.1 gi|14521712|ref|NP_127188.1| - 0.086 12.9 20.5 0.46 10.6 20.5 1.8 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain DUF2408 PF10303.9 gi|14521712|ref|NP_127188.1| - 0.098 13.2 9.6 0.16 12.6 9.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) DASH_Dam1 PF08653.10 gi|14521712|ref|NP_127188.1| - 0.1 12.4 0.4 0.1 12.4 0.4 2.1 2 1 0 2 2 2 0 DASH complex subunit Dam1 Sec34 PF04136.15 gi|14521712|ref|NP_127188.1| - 0.1 12.4 12.1 0.72 9.7 1.8 2.1 1 1 0 2 2 2 0 Sec34-like family FUSC PF04632.12 gi|14521712|ref|NP_127188.1| - 0.11 11.1 1.7 0.12 10.9 1.7 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Spc7 PF08317.11 gi|14521712|ref|NP_127188.1| - 0.11 11.4 18.9 0.72 8.7 3.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein CLZ PF16526.5 gi|14521712|ref|NP_127188.1| - 0.14 12.6 13.4 0.86 10.0 5.3 2.3 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1664 PF07889.12 gi|14521712|ref|NP_127188.1| - 0.14 12.2 11.7 0.41 10.7 4.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Filament PF00038.21 gi|14521712|ref|NP_127188.1| - 0.14 11.7 14.1 0.41 10.2 5.1 2.0 1 1 1 2 2 2 0 Intermediate filament protein TACC_C PF05010.14 gi|14521712|ref|NP_127188.1| - 0.2 11.4 15.0 0.66 9.7 15.0 1.7 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal T_Ag_DNA_bind PF02217.16 gi|14521712|ref|NP_127188.1| - 0.21 12.2 2.6 1.2 9.8 0.2 2.7 1 1 2 3 3 3 0 Origin of replication binding protein zf-CpG_bind_C PF12269.8 gi|14521712|ref|NP_127188.1| - 0.24 11.1 10.6 0.4 10.4 4.2 2.0 1 1 1 2 2 2 0 CpG binding protein zinc finger C terminal domain Syntaxin-6_N PF09177.11 gi|14521712|ref|NP_127188.1| - 0.26 11.9 8.5 0.74 10.4 8.5 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal BRI3BP PF14965.6 gi|14521712|ref|NP_127188.1| - 0.28 10.7 1.7 0.36 10.3 0.6 1.8 1 1 1 2 2 2 0 Negative regulator of p53/TP53 PCRF PF03462.18 gi|14521712|ref|NP_127188.1| - 0.31 10.9 7.9 0.48 10.3 7.9 1.3 1 0 0 1 1 1 0 PCRF domain FapA PF03961.13 gi|14521712|ref|NP_127188.1| - 0.35 9.4 10.8 0.43 9.1 10.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Seryl_tRNA_N PF02403.22 gi|14521712|ref|NP_127188.1| - 0.39 11.0 17.3 0.33 11.2 6.6 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Fib_alpha PF08702.10 gi|14521712|ref|NP_127188.1| - 0.45 10.7 12.4 2.2 8.5 12.6 2.0 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family EzrA PF06160.12 gi|14521712|ref|NP_127188.1| - 0.46 8.6 15.4 0.68 8.0 15.4 1.3 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA DUF3958 PF13125.6 gi|14521712|ref|NP_127188.1| - 0.54 10.5 17.5 1.3 9.3 2.6 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) DUF4407 PF14362.6 gi|14521712|ref|NP_127188.1| - 0.59 9.4 8.0 0.8 9.0 8.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CENP-F_leu_zip PF10473.9 gi|14521712|ref|NP_127188.1| - 0.76 9.8 18.4 0.85 9.6 2.7 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc24 PF08286.11 gi|14521712|ref|NP_127188.1| - 0.85 9.9 15.1 3 8.1 5.8 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF3450 PF11932.8 gi|14521712|ref|NP_127188.1| - 0.95 8.7 20.9 2 7.6 6.7 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) Ead_Ea22 PF13935.6 gi|14521712|ref|NP_127188.1| - 0.97 10.1 8.2 4.5 7.9 8.2 1.9 1 1 0 1 1 1 0 Ead/Ea22-like protein Prefoldin PF02996.17 gi|14521712|ref|NP_127188.1| - 0.97 9.4 17.9 1.6 8.7 7.0 2.2 1 1 1 2 2 2 0 Prefoldin subunit CREPT PF16566.5 gi|14521712|ref|NP_127188.1| - 0.97 9.6 14.8 3.2 7.9 5.6 2.1 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour PEARLI-4 PF05278.12 gi|14521712|ref|NP_127188.1| - 0.99 8.9 9.7 1.2 8.6 4.6 2.0 1 1 1 2 2 2 0 Arabidopsis phospholipase-like protein (PEARLI 4) TPR_MLP1_2 PF07926.12 gi|14521712|ref|NP_127188.1| - 1.1 9.4 19.7 3.5 7.7 19.7 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein GAGBD PF16828.5 gi|14521712|ref|NP_127188.1| - 1.1 9.4 11.2 1.5 8.9 0.9 2.3 1 1 1 2 2 2 0 GAG-binding domain on surface antigen Flagellin_N PF00669.20 gi|14521712|ref|NP_127188.1| - 1.2 9.3 9.9 1.5 8.9 6.9 2.0 1 1 1 2 2 2 0 Bacterial flagellin N-terminal helical region RRF_GI PF12614.8 gi|14521712|ref|NP_127188.1| - 1.3 9.2 7.4 1.3 9.1 4.7 1.9 1 1 1 2 2 2 0 Ribosome recycling factor Com_YlbF PF06133.11 gi|14521712|ref|NP_127188.1| - 1.4 9.6 19.4 26 5.5 19.4 2.0 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA YabA PF06156.13 gi|14521712|ref|NP_127188.1| - 1.4 9.6 13.0 2 9.1 2.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Spectrin PF00435.21 gi|14521712|ref|NP_127188.1| - 1.5 9.3 15.4 1.8 9.1 12.1 2.0 1 1 1 2 2 2 0 Spectrin repeat CAP18_C PF12153.8 gi|14521712|ref|NP_127188.1| - 1.7 8.6 4.8 0.43 10.5 0.7 2.0 2 0 0 2 2 2 0 LPS binding domain of CAP18 (C terminal) DUF1515 PF07439.11 gi|14521712|ref|NP_127188.1| - 1.8 8.6 4.8 4.4 7.4 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) Allexi_40kDa PF05549.11 gi|14521712|ref|NP_127188.1| - 1.9 8.0 7.7 0.99 8.9 1.9 1.9 1 1 1 2 2 2 0 Allexivirus 40kDa protein YlqD PF11068.8 gi|14521712|ref|NP_127188.1| - 2 8.8 21.7 0.85 10.0 7.5 2.1 1 1 1 2 2 2 0 YlqD protein NPV_P10 PF05531.12 gi|14521712|ref|NP_127188.1| - 2 8.9 13.3 1.2 9.6 2.7 2.3 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein MCU PF04678.13 gi|14521712|ref|NP_127188.1| - 2.1 8.4 12.1 19 5.3 12.1 1.9 1 1 0 1 1 1 0 Mitochondrial calcium uniporter THOC7 PF05615.13 gi|14521712|ref|NP_127188.1| - 2.1 8.6 15.4 0.33 11.2 2.9 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 TRAF_BIRC3_bd PF16673.5 gi|14521712|ref|NP_127188.1| - 2.1 8.2 13.2 0.05 13.4 5.3 2.2 2 2 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain ADIP PF11559.8 gi|14521712|ref|NP_127188.1| - 2.2 8.4 19.5 0.63 10.1 7.7 2.1 1 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF948 PF06103.11 gi|14521712|ref|NP_127188.1| - 2.2 8.6 11.5 2.8 8.3 4.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) FadA PF09403.10 gi|14521712|ref|NP_127188.1| - 3.2 8.3 18.4 2.2 8.8 7.8 2.2 1 1 0 2 2 2 0 Adhesion protein FadA Muted PF14942.6 gi|14521712|ref|NP_127188.1| - 3.3 8.1 14.8 4.8 7.5 7.8 2.1 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein UPF0449 PF15136.6 gi|14521712|ref|NP_127188.1| - 3.3 8.2 13.0 31 5.1 13.0 2.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 Snapin_Pallidin PF14712.6 gi|14521712|ref|NP_127188.1| - 3.5 8.1 18.4 1.5 9.3 11.3 2.1 1 1 1 2 2 2 0 Snapin/Pallidin Rx_N PF18052.1 gi|14521712|ref|NP_127188.1| - 3.5 8.0 11.7 4 7.8 4.3 2.4 1 1 1 2 2 2 0 Rx N-terminal domain DUF16 PF01519.16 gi|14521712|ref|NP_127188.1| - 3.7 8.1 18.8 0.39 11.2 7.1 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 DivIC PF04977.15 gi|14521712|ref|NP_127188.1| - 3.9 7.3 19.9 3.4 7.5 6.7 2.2 2 0 0 2 2 2 0 Septum formation initiator LIF_OSM PF01291.17 gi|14521712|ref|NP_127188.1| - 4.1 7.5 8.6 0.96 9.6 1.9 2.0 1 1 0 2 2 2 0 LIF / OSM family YscO PF07321.12 gi|14521712|ref|NP_127188.1| - 4.1 7.3 19.5 2.1 8.3 4.8 2.1 1 1 1 2 2 2 0 Type III secretion protein YscO PI3K_P85_iSH2 PF16454.5 gi|14521712|ref|NP_127188.1| - 4.4 6.9 15.9 85 2.7 16.0 2.0 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain AAA_13 PF13166.6 gi|14521712|ref|NP_127188.1| - 4.5 5.8 12.9 7.2 5.1 12.9 1.3 1 1 0 1 1 1 0 AAA domain CC2-LZ PF16516.5 gi|14521712|ref|NP_127188.1| - 4.6 7.7 17.5 4.2 7.8 4.1 2.1 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator FAA_hydro_N_2 PF18288.1 gi|14521712|ref|NP_127188.1| - 5.2 7.6 6.7 15 6.1 0.6 2.3 1 1 1 2 2 2 0 Fumarylacetoacetase N-terminal domain 2 DUF4404 PF14357.6 gi|14521712|ref|NP_127188.1| - 5.3 7.7 13.9 5.3 7.8 2.6 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4404) HSCB_C PF07743.13 gi|14521712|ref|NP_127188.1| - 5.4 7.6 12.8 0.48 10.9 3.2 2.3 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain LPP PF04728.13 gi|14521712|ref|NP_127188.1| - 5.6 7.4 13.3 1.6 9.2 1.5 3.1 2 2 0 2 2 2 0 Lipoprotein leucine-zipper DUF4140 PF13600.6 gi|14521712|ref|NP_127188.1| - 6.1 7.4 14.4 1.2e+03 0.0 14.4 2.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 gi|14521712|ref|NP_127188.1| - 6.3 5.9 11.6 19 4.4 3.7 1.8 1 1 0 1 1 1 0 TMPIT-like protein DUF2443 PF10398.9 gi|14521712|ref|NP_127188.1| - 6.7 6.8 10.2 4.9 7.3 3.0 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2443) DUF2203 PF09969.9 gi|14521712|ref|NP_127188.1| - 6.9 7.4 11.2 2.8 8.7 6.7 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) HAUS6_N PF14661.6 gi|14521712|ref|NP_127188.1| - 7.3 6.1 13.1 25 4.3 1.3 1.8 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF641 PF04859.12 gi|14521712|ref|NP_127188.1| - 7.7 6.9 15.0 0.63 10.4 5.6 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) MbeB_N PF04837.12 gi|14521712|ref|NP_127188.1| - 8 6.9 12.8 5.7 7.3 4.8 2.3 2 0 0 2 2 2 0 MbeB-like, N-term conserved region BST2 PF16716.5 gi|14521712|ref|NP_127188.1| - 8.9 7.0 18.4 24 5.6 15.1 2.6 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 SRP54 PF00448.22 gi|33356800|ref|NP_127189.2| - 0.17 11.5 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TrwB_AAD_bind PF10412.9 gi|33356800|ref|NP_127189.2| - 0.18 10.7 0.0 0.59 9.0 0.0 1.7 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF5603 PF18231.1 gi|14521714|ref|NP_127190.1| - 8.2e-43 145.0 4.0 1.6e-42 144.1 4.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5603) ParBc PF02195.18 gi|14521714|ref|NP_127190.1| - 8.4e-09 35.6 0.0 2.6e-08 34.0 0.0 1.8 2 0 0 2 2 2 1 ParB-like nuclease domain DUF1015 PF06245.11 gi|14521714|ref|NP_127190.1| - 1e-06 27.9 1.2 8.9e-05 21.5 0.8 2.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1015) Polbeta PF18765.1 gi|14521715|ref|NP_127191.1| - 2.9e-05 24.1 0.1 4.5e-05 23.5 0.1 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|14521715|ref|NP_127191.1| - 0.0029 17.9 0.2 0.0051 17.1 0.0 1.5 2 0 0 2 2 2 1 Nucleotidyltransferase domain Podovirus_Gp16 PF05894.12 gi|14521716|ref|NP_127192.1| - 0.012 15.1 1.2 0.015 14.8 1.2 1.1 1 0 0 1 1 1 0 Podovirus DNA encapsidation protein (Gp16) Cactin_mid PF10312.9 gi|14521716|ref|NP_127192.1| - 0.044 13.5 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Conserved mid region of cactin ATPase_2 PF01637.18 gi|14521717|ref|NP_127193.1| - 1.7e-18 67.4 0.3 2.5e-18 66.9 0.3 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|14521717|ref|NP_127193.1| - 1.1e-07 32.4 0.1 1.8e-07 31.7 0.1 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|14521717|ref|NP_127193.1| - 2.1e-06 27.8 0.0 0.021 14.9 0.0 2.5 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|14521717|ref|NP_127193.1| - 4.7e-05 23.7 0.0 0.00014 22.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain DUF1803 PF08820.10 gi|14521717|ref|NP_127193.1| - 0.0075 16.3 0.2 0.02 14.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1803) Ribosomal_L39 PF00832.20 gi|14521718|ref|NP_127194.1| - 9.9e-23 79.5 15.5 1.2e-22 79.2 15.5 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.19 gi|14521719|ref|NP_127195.1| - 8.3e-15 54.8 2.9 1e-14 54.5 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Aldo_ket_red PF00248.21 gi|14521719|ref|NP_127195.1| - 0.12 11.6 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family eIF-6 PF01912.18 gi|14521720|ref|NP_127196.1| - 2.4e-70 236.0 0.2 3.1e-70 235.6 0.2 1.1 1 0 0 1 1 1 1 eIF-6 family LUD_dom PF02589.15 gi|14521720|ref|NP_127196.1| - 0.033 13.9 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 LUD domain Ribosomal_L18A PF01775.17 gi|14521721|ref|NP_127197.1| - 1.1e-12 48.1 1.4 1.3e-12 47.8 1.4 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Prefoldin PF02996.17 gi|14521722|ref|NP_127198.1| - 1.4e-27 96.0 5.8 1.4e-27 96.0 5.8 1.4 1 1 1 2 2 2 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|14521722|ref|NP_127198.1| - 8.3e-05 22.5 14.9 0.00095 19.1 1.1 2.2 2 0 0 2 2 2 2 Prefoldin subunit Prefoldin_3 PF13758.6 gi|14521722|ref|NP_127198.1| - 0.0004 20.4 1.8 0.00063 19.7 0.3 1.9 1 1 1 2 2 2 1 Prefoldin subunit PriC PF07445.12 gi|14521722|ref|NP_127198.1| - 0.0034 17.3 2.7 0.0052 16.7 2.7 1.3 1 1 0 1 1 1 1 Primosomal replication protein priC DUF1664 PF07889.12 gi|14521722|ref|NP_127198.1| - 0.0051 16.8 4.0 0.022 14.8 0.4 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) Uds1 PF15456.6 gi|14521722|ref|NP_127198.1| - 0.0082 16.3 1.9 0.017 15.3 1.9 1.5 1 1 0 1 1 1 1 Up-regulated During Septation SlyX PF04102.12 gi|14521722|ref|NP_127198.1| - 0.0089 16.6 1.0 0.0089 16.6 1.0 2.2 2 0 0 2 2 2 1 SlyX DUF2076 PF09849.9 gi|14521722|ref|NP_127198.1| - 0.018 15.1 4.7 0.089 12.8 1.4 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2076) ERM PF00769.19 gi|14521722|ref|NP_127198.1| - 0.021 14.6 1.3 0.021 14.6 1.3 2.0 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Katanin_con80 PF13925.6 gi|14521722|ref|NP_127198.1| - 0.029 14.4 1.5 0.12 12.4 0.1 2.1 2 0 0 2 2 2 0 con80 domain of Katanin FmiP_Thoc5 PF09766.9 gi|14521722|ref|NP_127198.1| - 0.033 13.5 1.4 0.033 13.5 1.4 2.0 2 0 0 2 2 2 0 Fms-interacting protein/Thoc5 CENP-H PF05837.12 gi|14521722|ref|NP_127198.1| - 0.045 14.1 5.3 1.1 9.7 0.3 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DUF5082 PF16888.5 gi|14521722|ref|NP_127198.1| - 0.048 13.9 7.5 2.5 8.4 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) EzrA PF06160.12 gi|14521722|ref|NP_127198.1| - 0.068 11.3 12.7 0.039 12.1 1.3 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Helo_like_N PF17111.5 gi|14521722|ref|NP_127198.1| - 0.086 12.2 0.3 0.086 12.2 0.3 2.2 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins COG2 PF06148.11 gi|14521722|ref|NP_127198.1| - 0.091 12.9 0.4 0.091 12.9 0.4 2.2 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CdvA PF18822.1 gi|14521722|ref|NP_127198.1| - 0.095 12.5 8.2 0.43 10.4 0.3 2.5 2 2 0 2 2 2 0 CdvA-like coiled-coil domain DUF948 PF06103.11 gi|14521722|ref|NP_127198.1| - 0.099 12.9 3.8 0.93 9.8 0.2 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) THF_DHG_CYH_C PF02882.19 gi|14521722|ref|NP_127198.1| - 0.12 11.7 0.1 0.13 11.5 0.1 1.3 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PEP-utilisers_N PF05524.13 gi|14521722|ref|NP_127198.1| - 0.13 12.4 0.3 0.13 12.4 0.3 2.4 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal Noelin-1 PF12308.8 gi|14521722|ref|NP_127198.1| - 0.14 12.1 5.3 0.61 10.1 0.5 2.1 2 0 0 2 2 2 0 Neurogenesis glycoprotein TPR_7 PF13176.6 gi|14521722|ref|NP_127198.1| - 0.17 12.0 2.5 0.42 10.7 0.3 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat KxDL PF10241.9 gi|14521722|ref|NP_127198.1| - 0.24 11.7 10.7 0.13 12.6 1.1 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein BORCS7 PF16088.5 gi|14521722|ref|NP_127198.1| - 0.25 11.6 6.4 1.4 9.2 0.3 2.4 2 1 0 2 2 2 0 BLOC-1-related complex sub-unit 7 CC2-LZ PF16516.5 gi|14521722|ref|NP_127198.1| - 0.48 10.8 9.6 2.5 8.5 0.9 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Spc7 PF08317.11 gi|14521722|ref|NP_127198.1| - 0.53 9.1 15.2 0.29 10.0 1.2 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Laminin_II PF06009.12 gi|14521722|ref|NP_127198.1| - 0.7 9.9 8.6 0.83 9.7 0.5 2.2 2 0 0 2 2 2 0 Laminin Domain II Snapin_Pallidin PF14712.6 gi|14521722|ref|NP_127198.1| - 0.72 10.3 11.8 0.77 10.2 1.0 2.2 2 0 0 2 2 2 0 Snapin/Pallidin TMPIT PF07851.13 gi|14521722|ref|NP_127198.1| - 0.74 9.0 6.7 3 7.0 0.4 2.0 1 1 1 2 2 2 0 TMPIT-like protein FlaC_arch PF05377.11 gi|14521722|ref|NP_127198.1| - 1 9.8 5.7 14 6.2 0.3 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) NPV_P10 PF05531.12 gi|14521722|ref|NP_127198.1| - 1.3 9.5 6.5 2.8 8.5 0.6 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FliD_N PF02465.18 gi|14521722|ref|NP_127198.1| - 1.6 9.5 7.7 4.4 8.1 1.5 2.2 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus KLRAQ PF10205.9 gi|14521722|ref|NP_127198.1| - 1.7 8.9 13.2 4.8 7.5 1.6 2.2 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein HAUS-augmin3 PF14932.6 gi|14521722|ref|NP_127198.1| - 2.2 7.8 16.4 3.3 7.2 1.0 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 DUF4446 PF14584.6 gi|14521722|ref|NP_127198.1| - 2.3 8.2 6.3 0.73 9.8 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) AAA_13 PF13166.6 gi|14521722|ref|NP_127198.1| - 2.7 6.5 10.1 0.071 11.7 1.9 1.8 1 1 0 1 1 1 0 AAA domain XhlA PF10779.9 gi|14521722|ref|NP_127198.1| - 4.2 7.7 7.6 1.4 9.1 1.5 2.4 2 0 0 2 2 2 0 Haemolysin XhlA PCRF PF03462.18 gi|14521722|ref|NP_127198.1| - 4.8 7.0 9.0 1.6 8.6 2.1 2.1 1 1 1 2 2 2 0 PCRF domain Spc24 PF08286.11 gi|14521722|ref|NP_127198.1| - 4.9 7.5 12.2 0.77 10.0 0.7 2.5 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Fib_alpha PF08702.10 gi|14521722|ref|NP_127198.1| - 4.9 7.3 7.2 5.1 7.3 3.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 gi|14521722|ref|NP_127198.1| - 6.6 6.2 8.2 36 3.8 8.2 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit FapA PF03961.13 gi|14521722|ref|NP_127198.1| - 9.2 4.7 13.6 1.2 7.6 1.4 2.1 1 1 1 2 2 2 0 Flagellar Assembly Protein A MMR_HSR1_C PF08438.10 gi|14521723|ref|NP_127199.1| - 2.3e-36 124.8 0.1 3.7e-36 124.1 0.1 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|14521723|ref|NP_127199.1| - 2.7e-20 72.6 0.0 1.2e-19 70.4 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|14521723|ref|NP_127199.1| - 7.7e-11 41.8 0.1 3.4e-07 29.9 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B TGS PF02824.21 gi|14521723|ref|NP_127199.1| - 1.7e-09 37.6 0.0 3.3e-09 36.6 0.0 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1_Xtn PF16897.5 gi|14521723|ref|NP_127199.1| - 0.018 15.1 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 gi|14521723|ref|NP_127199.1| - 0.13 12.2 0.1 0.47 10.3 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase ZnuA PF01297.17 gi|14521724|ref|NP_127200.1| - 3e-26 92.4 0.0 3.8e-26 92.0 0.0 1.1 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic AAA_14 PF13173.6 gi|14521725|ref|NP_127201.1| - 2.3e-27 95.6 0.0 4.2e-27 94.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|14521725|ref|NP_127201.1| - 2e-07 31.2 0.0 4.4e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea DUF4143 PF13635.6 gi|14521725|ref|NP_127201.1| - 2.1e-07 31.1 0.0 2.9e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) RNA_helicase PF00910.22 gi|14521725|ref|NP_127201.1| - 0.012 16.0 0.0 0.063 13.7 0.0 2.2 3 0 0 3 3 3 0 RNA helicase AAA PF00004.29 gi|14521725|ref|NP_127201.1| - 0.039 14.4 0.0 0.078 13.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|14521725|ref|NP_127201.1| - 0.059 13.3 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 NTPase AAA_16 PF13191.6 gi|14521725|ref|NP_127201.1| - 0.12 12.8 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|14521725|ref|NP_127201.1| - 0.14 12.4 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain MoCF_biosynth PF00994.24 gi|14521726|ref|NP_127202.1| - 3.7e-32 111.0 0.4 4.6e-32 110.7 0.4 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain 2-Hacid_dh_C PF02826.19 gi|14521727|ref|NP_127203.1| - 3.9e-57 192.5 0.0 6.9e-56 188.4 0.0 2.4 2 1 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|14521727|ref|NP_127203.1| - 2.5e-31 108.1 0.0 3.3e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|14521727|ref|NP_127203.1| - 3e-07 30.8 0.0 5e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|14521727|ref|NP_127203.1| - 8.3e-07 29.5 0.0 2e-06 28.3 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|14521727|ref|NP_127203.1| - 3.3e-06 27.2 0.0 1.6e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 gi|14521727|ref|NP_127203.1| - 3.3e-06 26.8 0.0 1.2e-05 25.0 0.0 1.8 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 gi|14521727|ref|NP_127203.1| - 0.0001 22.7 0.0 0.00029 21.2 0.0 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 gi|14521727|ref|NP_127203.1| - 0.0008 19.4 0.0 0.0057 16.7 0.0 2.2 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DpaA_N PF16924.5 gi|14521727|ref|NP_127203.1| - 0.0011 19.0 0.1 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 Dipicolinate synthase subunit A N-terminal domain ApbA PF02558.16 gi|14521727|ref|NP_127203.1| - 0.0035 17.0 0.0 0.0081 15.8 0.0 1.6 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA ThiF PF00899.21 gi|14521727|ref|NP_127203.1| - 0.0043 16.5 0.0 0.15 11.4 0.0 2.3 2 0 0 2 2 2 1 ThiF family AdoHcyase_NAD PF00670.21 gi|14521727|ref|NP_127203.1| - 0.022 14.8 0.0 0.076 13.1 0.0 1.8 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Semialdhyde_dh PF01118.24 gi|14521727|ref|NP_127203.1| - 0.044 14.2 0.2 1.1 9.8 0.1 2.7 2 2 1 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain PTS_IIB PF02302.17 gi|14521727|ref|NP_127203.1| - 0.15 12.8 0.5 3.3 8.5 0.1 2.5 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit Rossmann-like PF10727.9 gi|14521727|ref|NP_127203.1| - 0.15 11.9 0.0 0.43 10.4 0.0 1.7 1 0 0 1 1 1 0 Rossmann-like domain Peptidase_M42 PF05343.14 gi|14521728|ref|NP_127204.1| - 5.4e-87 291.5 0.0 6.2e-87 291.3 0.0 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|14521728|ref|NP_127204.1| - 2.4e-12 47.0 0.0 5.9e-12 45.7 0.0 1.6 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|14521728|ref|NP_127204.1| - 3.2e-07 30.2 0.0 0.00013 21.7 0.0 2.2 2 0 0 2 2 2 2 Peptidase family M28 TauE PF01925.19 gi|14521729|ref|NP_127205.1| - 4.1e-58 196.8 30.3 4.7e-58 196.6 30.3 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MarC PF01914.17 gi|14521729|ref|NP_127205.1| - 0.0039 16.6 6.0 0.029 13.7 0.1 2.4 2 1 0 2 2 2 2 MarC family integral membrane protein TerC PF03741.16 gi|14521729|ref|NP_127205.1| - 0.0053 16.5 1.3 0.0053 16.5 1.3 2.8 2 1 1 3 3 3 1 Integral membrane protein TerC family AAA_18 PF13238.6 gi|14521731|ref|NP_127207.1| - 2.1e-19 70.3 0.1 4.2e-19 69.4 0.0 1.4 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|14521731|ref|NP_127207.1| - 2.6e-07 30.7 0.5 0.0077 16.1 0.1 2.1 2 0 0 2 2 2 2 Deoxynucleoside kinase CoaE PF01121.20 gi|14521731|ref|NP_127207.1| - 3.7e-05 23.5 0.3 0.00081 19.1 0.0 2.4 2 1 0 2 2 2 1 Dephospho-CoA kinase AAA_17 PF13207.6 gi|14521731|ref|NP_127207.1| - 7.1e-05 23.2 0.4 0.00026 21.4 0.1 2.0 2 1 0 2 2 2 1 AAA domain SKI PF01202.22 gi|14521731|ref|NP_127207.1| - 0.0011 19.1 0.0 0.011 15.9 0.0 2.0 2 0 0 2 2 2 1 Shikimate kinase Thymidylate_kin PF02223.17 gi|14521731|ref|NP_127207.1| - 0.0021 17.8 0.4 0.018 14.7 0.1 2.1 2 0 0 2 2 2 1 Thymidylate kinase AAA_33 PF13671.6 gi|14521731|ref|NP_127207.1| - 0.0076 16.4 0.0 0.083 13.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain Guanylate_kin PF00625.21 gi|14521731|ref|NP_127207.1| - 0.018 14.7 0.0 0.025 14.3 0.0 1.3 1 0 0 1 1 1 0 Guanylate kinase DUF835 PF05763.12 gi|14521732|ref|NP_127208.1| - 3.8e-31 107.6 0.0 5.3e-31 107.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF835) Meckelin PF09773.9 gi|14521732|ref|NP_127208.1| - 0.075 11.1 3.3 0.11 10.5 3.3 1.2 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) RIO1 PF01163.22 gi|14521733|ref|NP_127209.1| - 2.2e-50 170.9 0.1 2.9e-50 170.5 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|14521733|ref|NP_127209.1| - 2.6e-23 82.0 0.1 4.8e-23 81.2 0.1 1.5 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.25 gi|14521733|ref|NP_127209.1| - 2.5e-08 33.6 0.2 6.1e-08 32.3 0.2 1.6 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|14521733|ref|NP_127209.1| - 2.7e-08 34.0 1.9 0.00042 20.3 0.4 2.7 1 1 1 2 2 2 2 Phosphotransferase enzyme family WaaY PF06176.11 gi|14521733|ref|NP_127209.1| - 0.0023 17.6 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Pkinase_Tyr PF07714.17 gi|14521733|ref|NP_127209.1| - 0.01 15.2 0.1 0.069 12.4 0.1 2.1 1 1 0 1 1 1 0 Protein tyrosine kinase ABC1 PF03109.16 gi|14521733|ref|NP_127209.1| - 0.056 13.6 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 ABC1 family Pkinase_fungal PF17667.1 gi|14521733|ref|NP_127209.1| - 0.075 11.8 0.1 0.11 11.3 0.1 1.2 1 0 0 1 1 1 0 Fungal protein kinase La PF05383.17 gi|14521733|ref|NP_127209.1| - 0.14 12.2 0.0 0.38 10.8 0.0 1.8 1 0 0 1 1 1 0 La domain Glyco_hydro_42 PF02449.15 gi|14521734|ref|NP_127210.1| - 8.4e-102 341.3 0.6 1.1e-101 341.0 0.6 1.1 1 0 0 1 1 1 1 Beta-galactosidase Glyco_hydro_35 PF01301.19 gi|14521734|ref|NP_127210.1| - 5.2e-46 157.7 2.8 3.8e-44 151.6 1.2 3.2 2 1 0 2 2 2 1 Glycosyl hydrolases family 35 Glyco_hydro_42M PF08532.10 gi|14521734|ref|NP_127210.1| - 0.0015 18.1 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain SIS PF01380.22 gi|14521735|ref|NP_127211.1| - 6.5e-22 77.8 0.0 5.6e-10 39.2 0.0 2.4 2 0 0 2 2 2 2 SIS domain ABC_tran PF00005.27 gi|14521736|ref|NP_127212.1| - 4.1e-30 105.1 0.0 5.5e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14521736|ref|NP_127212.1| - 5e-20 71.8 0.0 8e-20 71.1 0.0 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|14521736|ref|NP_127212.1| - 6.4e-06 26.5 1.3 9.6e-05 22.7 1.3 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|14521736|ref|NP_127212.1| - 0.0024 17.3 0.4 0.015 14.7 0.4 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|14521736|ref|NP_127212.1| - 0.0027 18.1 0.1 0.0033 17.8 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|14521736|ref|NP_127212.1| - 0.003 17.3 0.1 0.007 16.1 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|14521736|ref|NP_127212.1| - 0.029 14.1 0.1 0.39 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|14521736|ref|NP_127212.1| - 0.035 13.8 0.2 0.045 13.4 0.2 1.2 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|14521736|ref|NP_127212.1| - 0.037 13.2 0.9 0.062 12.5 0.4 1.7 2 1 0 2 2 2 0 NB-ARC domain AAA PF00004.29 gi|14521736|ref|NP_127212.1| - 0.083 13.3 0.0 1.1 9.7 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|14521736|ref|NP_127212.1| - 0.15 12.1 0.2 0.47 10.5 0.1 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAP_NTPase PF07693.14 gi|14521736|ref|NP_127212.1| - 0.15 11.3 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain AAA_18 PF13238.6 gi|14521736|ref|NP_127212.1| - 0.16 12.5 0.0 0.29 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|14521736|ref|NP_127212.1| - 0.18 11.8 0.2 0.35 10.9 0.2 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PRK PF00485.18 gi|14521736|ref|NP_127212.1| - 0.18 11.5 0.0 0.34 10.6 0.0 1.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_21 PF13304.6 gi|14521736|ref|NP_127212.1| - 0.78 9.5 4.8 0.52 10.1 0.4 2.1 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system oligo_HPY PF08352.12 gi|14521737|ref|NP_127213.1| - 7.4e-21 74.4 0.1 1.3e-20 73.6 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 gi|14521737|ref|NP_127213.1| - 1.8e-20 73.9 0.0 2.5e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|14521737|ref|NP_127213.1| - 0.00034 20.5 1.8 0.00098 19.0 0.6 1.9 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|14521737|ref|NP_127213.1| - 0.00058 20.2 0.3 0.0022 18.3 0.3 1.8 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|14521737|ref|NP_127213.1| - 0.0056 16.6 1.4 3.5 7.5 0.0 3.0 2 1 1 3 3 3 1 NTPase AAA_29 PF13555.6 gi|14521737|ref|NP_127213.1| - 0.018 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|14521737|ref|NP_127213.1| - 0.03 14.7 0.1 0.047 14.1 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 gi|14521737|ref|NP_127213.1| - 0.034 13.6 0.3 1.5 8.2 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|14521737|ref|NP_127213.1| - 0.043 13.7 0.1 0.098 12.6 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 gi|14521737|ref|NP_127213.1| - 0.048 13.6 0.1 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 NACHT domain MeaB PF03308.16 gi|14521737|ref|NP_127213.1| - 0.06 12.3 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|14521737|ref|NP_127213.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ATP-synt_ab PF00006.25 gi|14521737|ref|NP_127213.1| - 0.17 11.5 0.0 0.3 10.7 0.0 1.6 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 gi|14521737|ref|NP_127213.1| - 0.21 12.0 0.1 0.5 10.8 0.1 1.6 1 0 0 1 1 1 0 RNA helicase BPD_transp_1 PF00528.22 gi|14521738|ref|NP_127214.1| - 2.4e-23 82.9 17.6 2.4e-23 82.9 17.6 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|14521738|ref|NP_127214.1| - 0.0035 17.3 0.2 0.0035 17.3 0.2 3.6 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|14521739|ref|NP_127215.1| - 1.3e-46 158.7 14.5 1.3e-46 158.7 14.5 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|14521740|ref|NP_127216.1| - 4.8e-71 239.7 6.7 4.8e-71 239.7 6.7 2.0 2 1 1 3 3 3 1 Bacterial extracellular solute-binding proteins, family 5 Middle Glyco_hydro_1 PF00232.18 gi|14521741|ref|NP_127217.1| - 2.9e-63 213.9 7.1 2.4e-51 174.6 3.7 2.9 2 1 0 2 2 2 2 Glycosyl hydrolase family 1 PIN PF01850.21 gi|14521742|ref|NP_127218.1| - 2.4e-05 24.8 0.8 3.1e-05 24.5 0.8 1.2 1 0 0 1 1 1 1 PIN domain PIG-L PF02585.17 gi|14521743|ref|NP_127219.1| - 1.3e-29 103.5 0.0 1.9e-29 102.9 0.0 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Lig_C PF18330.1 gi|14521744|ref|NP_127220.1| - 1.8e-26 92.6 0.3 3.1e-26 91.8 0.3 1.4 1 0 0 1 1 1 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|14521744|ref|NP_127220.1| - 3e-20 73.2 0.2 5.4e-20 72.3 0.2 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|14521744|ref|NP_127220.1| - 6.6e-09 35.7 0.1 0.00039 20.1 0.1 2.5 2 0 0 2 2 2 2 ATP dependent DNA ligase domain SpoIIAA-like PF11964.8 gi|14521744|ref|NP_127220.1| - 0.12 13.5 0.0 0.45 11.6 0.0 2.0 1 1 1 2 2 2 0 SpoIIAA-like PSP1 PF04468.12 gi|14521744|ref|NP_127220.1| - 0.17 12.2 0.3 0.49 10.7 0.1 1.9 2 0 0 2 2 2 0 PSP1 C-terminal conserved region DUF4147 PF13660.6 gi|14521745|ref|NP_127221.1| - 9.6e-80 267.4 0.1 1.4e-79 266.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|14521745|ref|NP_127221.1| - 3.7e-36 123.6 0.9 7.9e-36 122.6 0.9 1.6 1 0 0 1 1 1 1 MOFRL family CheF-arch PF04283.12 gi|14521746|ref|NP_127222.1| - 3.6e-20 72.6 0.3 6.3e-20 71.9 0.3 1.3 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea DUF4527 PF15030.6 gi|14521747|ref|NP_127223.1| - 0.018 14.5 0.1 0.033 13.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) EOS1 PF12326.8 gi|14521747|ref|NP_127223.1| - 0.033 14.1 0.4 0.051 13.5 0.4 1.3 1 0 0 1 1 1 0 N-glycosylation protein BRE PF06113.12 gi|14521747|ref|NP_127223.1| - 0.036 12.9 0.1 0.054 12.3 0.1 1.2 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) Pilin_N PF07790.11 gi|14521747|ref|NP_127223.1| - 0.048 14.6 0.5 0.089 13.7 0.5 1.4 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal Bcr-Abl_Oligo PF09036.10 gi|14521747|ref|NP_127223.1| - 0.053 13.5 2.5 0.2 11.7 1.0 2.5 2 0 0 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain Ku_PK_bind PF08785.11 gi|14521747|ref|NP_127223.1| - 0.054 13.6 1.7 0.083 13.0 0.3 2.0 2 0 0 2 2 2 0 Ku C terminal domain like 2_5_RNA_ligase2 PF13563.6 gi|14521747|ref|NP_127223.1| - 0.094 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily Dynein_C PF18199.1 gi|14521747|ref|NP_127223.1| - 0.16 11.1 4.2 0.23 10.6 0.4 2.0 2 0 0 2 2 2 0 Dynein heavy chain C-terminal domain CemA PF03040.14 gi|14521747|ref|NP_127223.1| - 0.25 11.2 3.0 0.15 12.0 1.1 1.6 2 0 0 2 2 2 0 CemA family SID-1_RNA_chan PF13965.6 gi|14521747|ref|NP_127223.1| - 0.3 9.5 0.6 0.4 9.0 0.6 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF2500 PF10694.9 gi|14521747|ref|NP_127223.1| - 0.3 11.6 2.1 0.36 11.4 0.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2500) AKAP95 PF04988.12 gi|14521747|ref|NP_127223.1| - 0.36 11.0 3.3 0.72 10.1 3.3 1.5 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) ZapA PF05164.13 gi|14521747|ref|NP_127223.1| - 0.49 10.9 7.1 5.7 7.4 0.8 3.1 2 1 1 3 3 3 0 Cell division protein ZapA Col_cuticle_N PF01484.17 gi|14521747|ref|NP_127223.1| - 0.51 10.5 3.9 22 5.2 1.5 3.2 3 0 0 3 3 3 0 Nematode cuticle collagen N-terminal domain MCPsignal PF00015.21 gi|14521748|ref|NP_127224.1| - 1.1e-41 142.5 51.3 9.2e-38 129.7 17.6 4.4 1 1 3 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain dCache_1 PF02743.18 gi|14521748|ref|NP_127224.1| - 2.7e-41 142.0 0.1 2.7e-41 142.0 0.1 4.7 2 1 2 4 4 2 1 Cache domain Cache_3-Cache_2 PF17201.4 gi|14521748|ref|NP_127224.1| - 3.8e-12 46.1 0.8 3.8e-12 46.1 0.8 4.0 2 1 1 4 4 4 1 Cache 3/Cache 2 fusion domain HAMP PF00672.25 gi|14521748|ref|NP_127224.1| - 5.4e-11 42.7 9.2 7.6e-09 35.8 0.0 5.2 4 2 1 5 5 4 1 HAMP domain dCache_2 PF08269.11 gi|14521748|ref|NP_127224.1| - 3.7e-10 39.5 0.3 3.7e-10 39.5 0.3 5.3 2 2 1 5 5 5 1 Cache domain DUF948 PF06103.11 gi|14521748|ref|NP_127224.1| - 3.5e-08 33.6 37.7 0.032 14.5 4.9 6.4 3 3 1 4 4 4 2 Bacterial protein of unknown function (DUF948) GAPES1 PF17155.4 gi|14521748|ref|NP_127224.1| - 1.1e-05 24.9 0.0 2.5e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain DUF3584 PF12128.8 gi|14521748|ref|NP_127224.1| - 3.9e-05 21.4 27.0 5.3e-05 21.0 27.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Prominin PF05478.11 gi|14521748|ref|NP_127224.1| - 0.0001 20.5 23.8 0.00043 18.4 10.4 2.4 1 1 0 2 2 2 2 Prominin Fib_alpha PF08702.10 gi|14521748|ref|NP_127224.1| - 0.00016 21.9 28.6 0.62 10.2 1.2 5.7 3 2 3 6 6 6 2 Fibrinogen alpha/beta chain family HSBP1 PF06825.12 gi|14521748|ref|NP_127224.1| - 0.00033 20.4 5.8 0.98 9.3 0.1 4.6 4 1 0 4 4 3 1 Heat shock factor binding protein 1 Syntaxin_2 PF14523.6 gi|14521748|ref|NP_127224.1| - 0.00052 20.3 19.6 0.014 15.8 0.9 5.1 1 1 2 3 3 3 1 Syntaxin-like protein TACC_C PF05010.14 gi|14521748|ref|NP_127224.1| - 0.00099 18.9 28.1 0.13 12.0 2.7 4.8 1 1 3 4 4 4 3 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF1664 PF07889.12 gi|14521748|ref|NP_127224.1| - 0.0012 18.8 36.4 0.89 9.6 4.9 5.6 2 2 3 5 5 5 2 Protein of unknown function (DUF1664) ApoLp-III PF07464.11 gi|14521748|ref|NP_127224.1| - 0.0014 18.7 37.3 0.015 15.4 9.7 5.3 2 1 2 4 4 4 2 Apolipophorin-III precursor (apoLp-III) Mce4_CUP1 PF11887.8 gi|14521748|ref|NP_127224.1| - 0.0029 17.1 7.3 0.4 10.1 1.0 3.1 1 1 2 3 3 3 2 Cholesterol uptake porter CUP1 of Mce4, putative Spc7 PF08317.11 gi|14521748|ref|NP_127224.1| - 0.0032 16.4 36.4 0.028 13.3 14.6 3.2 1 1 2 3 3 3 2 Spc7 kinetochore protein Laminin_I PF06008.14 gi|14521748|ref|NP_127224.1| - 0.0039 16.9 43.9 0.027 14.2 5.2 4.2 3 2 1 5 5 4 3 Laminin Domain I Snapin_Pallidin PF14712.6 gi|14521748|ref|NP_127224.1| - 0.0052 17.2 25.2 0.034 14.6 0.6 6.0 4 1 2 6 6 5 2 Snapin/Pallidin BLOC1_2 PF10046.9 gi|14521748|ref|NP_127224.1| - 0.0099 16.2 35.0 0.024 15.0 1.9 6.5 4 3 1 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Serine_rich PF08824.10 gi|14521748|ref|NP_127224.1| - 0.013 15.5 15.1 2.4 8.1 0.9 4.4 2 2 2 4 4 3 0 Serine rich protein interaction domain Baculo_PEP_C PF04513.12 gi|14521748|ref|NP_127224.1| - 0.017 15.2 31.2 0.32 11.0 5.7 4.9 1 1 4 5 5 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Collagen_mid PF15984.5 gi|14521748|ref|NP_127224.1| - 0.019 14.7 4.2 2.2 8.0 0.2 3.3 2 2 0 2 2 2 0 Bacterial collagen, middle region sCache_2 PF17200.4 gi|14521748|ref|NP_127224.1| - 0.028 14.3 0.0 0.028 14.3 0.0 4.5 4 0 0 4 4 3 0 Single Cache domain 2 VWA_N PF08399.11 gi|14521748|ref|NP_127224.1| - 0.033 14.7 0.1 0.11 13.0 0.0 1.9 2 0 0 2 2 1 0 VWA N-terminal MobL PF18555.1 gi|14521748|ref|NP_127224.1| - 0.044 13.0 13.0 0.036 13.3 2.2 2.6 2 0 0 2 2 2 0 MobL relaxases ZapB PF06005.12 gi|14521748|ref|NP_127224.1| - 0.062 13.8 24.4 0.33 11.4 1.0 4.4 3 1 0 3 3 3 0 Cell division protein ZapB NPV_P10 PF05531.12 gi|14521748|ref|NP_127224.1| - 0.1 13.1 25.9 3.7 8.1 1.1 5.7 2 2 3 5 5 5 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 gi|14521748|ref|NP_127224.1| - 0.11 12.5 40.5 0.078 13.0 6.9 4.7 1 1 2 4 4 4 0 Laminin Domain II PhageMin_Tail PF10145.9 gi|14521748|ref|NP_127224.1| - 0.13 12.1 34.0 0.11 12.3 14.4 4.3 3 1 1 4 4 4 0 Phage-related minor tail protein DUF812 PF05667.11 gi|14521748|ref|NP_127224.1| - 0.17 10.7 39.5 1.3 7.9 8.0 3.2 1 1 1 3 3 3 0 Protein of unknown function (DUF812) CorA PF01544.18 gi|14521748|ref|NP_127224.1| - 0.27 10.5 33.8 0.049 12.9 5.4 3.6 2 1 2 4 4 3 0 CorA-like Mg2+ transporter protein Sec8_exocyst PF04048.14 gi|14521748|ref|NP_127224.1| - 0.29 11.0 19.9 0.3 10.9 1.7 4.6 2 2 2 4 4 4 0 Sec8 exocyst complex component specific domain GLTP PF08718.11 gi|14521748|ref|NP_127224.1| - 0.33 11.2 12.3 0.54 10.5 0.3 4.5 2 1 2 4 4 3 0 Glycolipid transfer protein (GLTP) Med30 PF11315.8 gi|14521748|ref|NP_127224.1| - 0.54 10.4 21.5 2.7 8.2 5.3 4.4 1 1 3 4 4 4 0 Mediator complex subunit 30 RecG_N PF17190.4 gi|14521748|ref|NP_127224.1| - 0.55 11.0 15.0 5.7 7.7 0.1 6.1 3 2 4 7 7 7 0 RecG N-terminal helical domain AAA_24 PF13479.6 gi|14521748|ref|NP_127224.1| - 0.55 9.9 6.8 0.48 10.1 1.2 2.6 1 1 1 2 2 2 0 AAA domain LXG PF04740.12 gi|14521748|ref|NP_127224.1| - 0.73 9.5 26.7 1.4 8.6 9.4 3.8 1 1 1 2 2 2 0 LXG domain of WXG superfamily Sec34 PF04136.15 gi|14521748|ref|NP_127224.1| - 0.94 9.4 21.1 3.9 7.4 0.8 4.7 4 1 1 5 5 4 0 Sec34-like family AIP3 PF03915.13 gi|14521748|ref|NP_127224.1| - 1.2 8.2 31.3 1.4 7.9 15.9 3.5 1 1 1 3 3 3 0 Actin interacting protein 3 PI3K_P85_iSH2 PF16454.5 gi|14521748|ref|NP_127224.1| - 1.6 8.3 21.1 21 4.7 7.8 3.2 2 1 1 3 3 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain COG2 PF06148.11 gi|14521748|ref|NP_127224.1| - 1.8 8.7 35.2 1.4 9.0 5.0 5.8 2 2 2 5 5 5 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 gi|14521748|ref|NP_127224.1| - 2 8.9 16.7 9.8 6.6 2.8 4.9 1 1 3 5 5 5 0 fungal STAND N-terminal Goodbye domain BAR_3 PF16746.5 gi|14521748|ref|NP_127224.1| - 2 8.0 19.2 1.1 8.9 1.1 4.2 2 2 1 3 3 3 0 BAR domain of APPL family Herpes_UL17 PF04559.12 gi|14521748|ref|NP_127224.1| - 2 7.1 6.3 9.5 4.9 5.9 2.1 1 1 0 1 1 1 0 Herpesvirus UL17 protein DUF1539 PF07560.11 gi|14521748|ref|NP_127224.1| - 2.1 8.5 4.7 2.2 8.3 0.1 3.1 2 1 0 2 2 2 0 Domain of Unknown Function (DUF1539) DASH_Dad2 PF08654.10 gi|14521748|ref|NP_127224.1| - 2.6 8.5 27.6 6.9 7.2 3.7 5.9 4 3 1 5 5 5 0 DASH complex subunit Dad2 HAUS-augmin3 PF14932.6 gi|14521748|ref|NP_127224.1| - 2.7 7.5 24.4 2.9 7.4 2.0 3.5 1 1 0 3 3 3 0 HAUS augmin-like complex subunit 3 ATG16 PF08614.11 gi|14521748|ref|NP_127224.1| - 3.1 8.0 30.3 1.3 9.2 13.3 2.6 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) Sec5 PF15469.6 gi|14521748|ref|NP_127224.1| - 3.2 7.5 17.4 0.68 9.7 2.6 3.5 1 1 3 4 4 4 0 Exocyst complex component Sec5 ING PF12998.7 gi|14521748|ref|NP_127224.1| - 3.4 8.3 20.3 4.2 8.0 1.5 4.3 1 1 1 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding TMPIT PF07851.13 gi|14521748|ref|NP_127224.1| - 3.5 6.8 26.7 22 4.2 2.6 4.1 1 1 1 2 2 1 0 TMPIT-like protein YkyA PF10368.9 gi|14521748|ref|NP_127224.1| - 3.5 7.3 40.4 0.84 9.3 6.7 4.7 2 2 2 4 4 4 0 Putative cell-wall binding lipoprotein LTXXQ PF07813.12 gi|14521748|ref|NP_127224.1| - 3.7 8.3 18.3 0.43 11.3 1.7 4.1 2 2 2 4 4 2 0 LTXXQ motif family protein FTCD_C PF04961.12 gi|14521748|ref|NP_127224.1| - 3.9 7.2 22.4 0.034 13.9 4.4 3.7 2 1 0 3 3 3 0 Formiminotransferase-cyclodeaminase CheZ PF04344.13 gi|14521748|ref|NP_127224.1| - 4.1 7.3 27.6 0.47 10.3 7.3 3.7 1 1 3 4 4 4 0 Chemotaxis phosphatase, CheZ HEPN_AbiU2 PF18734.1 gi|14521748|ref|NP_127224.1| - 4.5 6.7 5.9 49 3.3 4.1 3.2 1 1 0 2 2 2 0 AbiU2 Syntaxin-6_N PF09177.11 gi|14521748|ref|NP_127224.1| - 4.6 7.9 32.9 0.7 10.5 2.0 5.7 2 1 3 5 5 3 0 Syntaxin 6, N-terminal AAA_13 PF13166.6 gi|14521748|ref|NP_127224.1| - 4.9 5.7 33.7 4.6 5.8 18.7 2.6 1 1 2 3 3 3 0 AAA domain ANAPC4 PF12896.7 gi|14521748|ref|NP_127224.1| - 5.1 6.5 12.2 0.57 9.6 0.4 4.0 2 2 1 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 4 CENP-K PF11802.8 gi|14521748|ref|NP_127224.1| - 5.9 6.4 19.3 0.22 11.1 0.3 3.5 1 1 2 3 3 2 0 Centromere-associated protein K LZ3wCH PF18517.1 gi|14521748|ref|NP_127224.1| - 5.9 7.1 6.2 43 4.3 0.6 3.9 4 0 0 4 4 2 0 Leucine zipper with capping helix domain FlgN PF05130.12 gi|14521748|ref|NP_127224.1| - 6.4 7.3 38.2 3.3 8.2 5.2 4.2 1 1 3 4 4 4 0 FlgN protein ISG65-75 PF11727.8 gi|14521748|ref|NP_127224.1| - 8.1 5.6 29.0 0.88 8.8 1.4 3.6 1 1 1 3 3 3 0 Invariant surface glycoprotein Dynein_C PF18199.1 gi|14521748|ref|NP_127224.1| - 8.3 5.5 11.2 25 3.9 8.0 3.2 3 1 1 4 4 3 0 Dynein heavy chain C-terminal domain DUF3450 PF11932.8 gi|14521748|ref|NP_127224.1| - 8.6 5.6 37.0 0.73 9.1 9.5 3.9 1 1 2 4 4 4 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 gi|14521748|ref|NP_127224.1| - 8.6 5.3 22.1 3.3 6.7 9.5 2.6 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Dak2 PF02734.17 gi|14521748|ref|NP_127224.1| - 9.3 6.1 24.7 0.29 11.0 1.6 4.2 2 1 0 4 4 3 0 DAK2 domain CheD PF03975.13 gi|14521749|ref|NP_127225.1| - 1.3e-34 118.6 0.1 1.6e-34 118.3 0.1 1.1 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.12 gi|14521750|ref|NP_127226.1| - 2.8e-12 46.3 1.4 1.5e-05 24.8 0.2 2.3 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|14521750|ref|NP_127226.1| - 2.9e-10 40.2 0.1 2.5e-08 34.0 0.0 2.4 3 0 0 3 3 3 2 Chemotaxis phosphatase CheX CheC PF04509.12 gi|33356802|ref|NP_127227.2| - 7.9e-18 64.1 3.0 1.3e-08 34.5 0.1 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|33356802|ref|NP_127227.2| - 1.2e-05 25.4 0.6 0.014 15.5 0.0 2.2 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX P2 PF07194.11 gi|14521752|ref|NP_127228.1| - 3.3e-40 136.0 0.9 4.1e-19 68.4 0.3 2.9 2 0 0 2 2 2 2 P2 response regulator binding domain CheW PF01584.19 gi|14521752|ref|NP_127228.1| - 2.7e-26 91.9 1.5 2.7e-26 91.9 1.5 1.8 2 0 0 2 2 2 1 CheW-like domain Hpt PF01627.23 gi|14521752|ref|NP_127228.1| - 8.9e-23 80.4 0.3 8.9e-23 80.4 0.3 2.0 2 0 0 2 2 2 1 Hpt domain HATPase_c PF02518.26 gi|14521752|ref|NP_127228.1| - 5.5e-21 75.2 0.1 1.8e-20 73.5 0.1 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H-kinase_dim PF02895.14 gi|14521752|ref|NP_127228.1| - 1e-16 61.1 1.3 3.6e-16 59.3 1.3 2.0 1 0 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|14521752|ref|NP_127228.1| - 0.0007 19.4 0.0 0.0019 18.0 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|14521752|ref|NP_127228.1| - 0.0043 17.0 0.1 0.012 15.5 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 gi|14521752|ref|NP_127228.1| - 0.038 13.9 0.0 0.17 11.8 0.0 2.1 1 1 0 1 1 1 0 GHKL domain RNA_pol_Rpc4 PF05132.14 gi|14521752|ref|NP_127228.1| - 1.3 9.5 5.6 6.1 7.3 0.9 2.3 2 0 0 2 2 2 0 RNA polymerase III RPC4 DUF913 PF06025.12 gi|14521752|ref|NP_127228.1| - 7 5.5 7.1 0.75 8.7 0.1 2.4 3 0 0 3 3 3 0 Domain of Unknown Function (DUF913) CheB_methylest PF01339.17 gi|14521753|ref|NP_127229.1| - 1.2e-61 207.3 0.4 3.9e-61 205.7 0.1 1.9 3 0 0 3 3 3 1 CheB methylesterase Response_reg PF00072.24 gi|14521753|ref|NP_127229.1| - 3.8e-25 88.2 1.6 5.3e-25 87.8 0.2 1.9 2 1 0 2 2 2 1 Response regulator receiver domain Response_reg PF00072.24 gi|14521754|ref|NP_127230.1| - 2.2e-33 114.7 2.6 2.5e-33 114.6 2.6 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MTD PF01993.18 gi|14521754|ref|NP_127230.1| - 0.0038 16.6 0.6 0.0047 16.3 0.6 1.2 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase B12-binding PF02310.19 gi|14521754|ref|NP_127230.1| - 0.0049 16.9 0.1 0.007 16.4 0.1 1.2 1 0 0 1 1 1 1 B12 binding domain UPF0261 PF06792.11 gi|14521754|ref|NP_127230.1| - 0.014 14.4 0.5 0.017 14.1 0.5 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Glycos_transf_1 PF00534.20 gi|14521754|ref|NP_127230.1| - 0.048 13.2 0.2 0.063 12.8 0.2 1.6 1 1 0 1 1 1 0 Glycosyl transferases group 1 CheR PF01739.18 gi|14521755|ref|NP_127231.1| - 1.2e-56 191.3 0.0 1.7e-56 190.8 0.0 1.2 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|14521755|ref|NP_127231.1| - 8.8e-13 47.8 4.3 1.7e-12 46.8 4.3 1.5 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_31 PF13847.6 gi|14521755|ref|NP_127231.1| - 0.0031 17.3 0.0 0.031 14.1 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|14521755|ref|NP_127231.1| - 0.012 16.4 0.0 0.045 14.5 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521755|ref|NP_127231.1| - 0.026 15.2 0.0 0.41 11.4 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain DUF3419 PF11899.8 gi|14521755|ref|NP_127231.1| - 0.088 12.0 0.2 0.4 9.8 0.0 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3419) MCPsignal PF00015.21 gi|14521756|ref|NP_127232.1| - 5.1e-42 143.6 22.2 5.1e-42 143.6 22.2 3.1 1 1 2 3 3 3 1 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF948 PF06103.11 gi|14521756|ref|NP_127232.1| - 1.8e-07 31.3 23.9 5.1e-05 23.4 3.0 4.8 1 1 4 5 5 5 2 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.9 gi|14521756|ref|NP_127232.1| - 2.1e-05 24.7 29.2 0.021 15.1 4.9 5.5 2 2 4 6 6 6 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 gi|14521756|ref|NP_127232.1| - 9.3e-05 22.5 30.6 0.04 14.0 4.8 4.9 2 2 3 5 5 5 3 Protein of unknown function (DUF1664) Mce4_CUP1 PF11887.8 gi|14521756|ref|NP_127232.1| - 0.00042 19.9 6.6 0.11 11.9 0.2 3.0 1 1 1 3 3 3 1 Cholesterol uptake porter CUP1 of Mce4, putative EzrA PF06160.12 gi|14521756|ref|NP_127232.1| - 0.0014 16.9 10.9 0.0014 16.9 10.9 3.3 2 1 1 3 3 3 1 Septation ring formation regulator, EzrA Snapin_Pallidin PF14712.6 gi|14521756|ref|NP_127232.1| - 0.0019 18.6 22.7 0.084 13.3 1.3 4.6 3 1 1 4 4 4 1 Snapin/Pallidin Fib_alpha PF08702.10 gi|14521756|ref|NP_127232.1| - 0.0049 17.1 30.1 0.03 14.5 11.2 4.4 3 2 2 5 5 5 1 Fibrinogen alpha/beta chain family Arfaptin PF06456.13 gi|14521756|ref|NP_127232.1| - 0.0049 16.5 6.3 0.021 14.4 1.3 2.9 1 1 2 3 3 3 1 Arfaptin-like domain ApoLp-III PF07464.11 gi|14521756|ref|NP_127232.1| - 0.0059 16.7 9.6 0.0059 16.7 9.6 4.4 1 1 3 4 4 4 2 Apolipophorin-III precursor (apoLp-III) Serine_rich PF08824.10 gi|14521756|ref|NP_127232.1| - 0.0059 16.6 12.0 0.23 11.4 0.6 3.1 2 2 1 3 3 3 3 Serine rich protein interaction domain CREPT PF16566.5 gi|14521756|ref|NP_127232.1| - 0.0062 16.7 19.3 0.29 11.3 0.5 4.3 2 2 2 4 4 4 2 Cell-cycle alteration and expression-elevated protein in tumour HAUS6_N PF14661.6 gi|14521756|ref|NP_127232.1| - 0.013 15.1 14.4 0.0086 15.7 6.3 2.8 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus YtxH PF12732.7 gi|14521756|ref|NP_127232.1| - 0.013 16.0 21.5 1.5e+02 3.0 9.8 5.4 2 2 0 2 2 2 0 YtxH-like protein CBFD_NFYB_HMF PF00808.23 gi|14521756|ref|NP_127232.1| - 0.015 15.6 2.3 0.11 12.8 2.3 2.6 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Spc7 PF08317.11 gi|14521756|ref|NP_127232.1| - 0.015 14.2 29.9 0.26 10.1 6.9 3.2 1 1 2 3 3 3 0 Spc7 kinetochore protein KH_5 PF13184.6 gi|14521756|ref|NP_127232.1| - 0.018 15.1 14.3 0.4 10.8 0.7 4.7 4 1 0 4 4 4 0 NusA-like KH domain Syntaxin_2 PF14523.6 gi|14521756|ref|NP_127232.1| - 0.019 15.3 24.0 0.063 13.7 3.3 5.0 1 1 3 4 4 4 0 Syntaxin-like protein KxDL PF10241.9 gi|14521756|ref|NP_127232.1| - 0.026 14.8 17.8 0.53 10.6 0.9 5.4 3 2 3 6 6 6 0 Uncharacterized conserved protein COG5 PF10392.9 gi|14521756|ref|NP_127232.1| - 0.027 14.6 16.6 0.067 13.4 0.7 4.3 2 2 3 5 5 5 0 Golgi transport complex subunit 5 Prominin PF05478.11 gi|14521756|ref|NP_127232.1| - 0.03 12.3 20.4 0.08 10.9 7.5 2.2 1 1 1 2 2 2 0 Prominin Laminin_II PF06009.12 gi|14521756|ref|NP_127232.1| - 0.034 14.2 32.4 0.055 13.5 3.8 4.5 2 2 3 5 5 5 0 Laminin Domain II Fmp27_WPPW PF10359.9 gi|14521756|ref|NP_127232.1| - 0.039 12.8 15.6 0.044 12.6 1.3 2.6 2 1 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain LXG PF04740.12 gi|14521756|ref|NP_127232.1| - 0.049 13.3 22.6 0.83 9.3 10.6 4.1 1 1 3 4 4 4 0 LXG domain of WXG superfamily T7SS_ESX_EspC PF10824.8 gi|14521756|ref|NP_127232.1| - 0.054 14.0 6.3 0.24 11.9 0.5 3.7 2 2 1 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm HisKA_3 PF07730.13 gi|14521756|ref|NP_127232.1| - 0.086 13.4 11.0 0.65 10.6 0.5 4.8 4 1 2 6 6 5 0 Histidine kinase TSKS PF15358.6 gi|14521756|ref|NP_127232.1| - 0.09 11.1 7.4 0.38 9.1 6.9 2.2 1 1 0 1 1 1 0 Testis-specific serine kinase substrate GHMP_kinases_C PF08544.13 gi|14521756|ref|NP_127232.1| - 0.098 13.0 3.0 0.96 9.9 0.2 3.3 3 1 1 4 4 2 0 GHMP kinases C terminal DUF5377 PF17347.2 gi|14521756|ref|NP_127232.1| - 0.11 12.9 0.2 0.61 10.5 0.1 2.3 2 0 0 2 2 1 0 Family of unknown function (DUF5377) DASH_Duo1 PF08651.10 gi|14521756|ref|NP_127232.1| - 0.11 12.2 18.5 1.5 8.6 2.2 5.1 4 2 1 5 5 5 0 DASH complex subunit Duo1 DUF2203 PF09969.9 gi|14521756|ref|NP_127232.1| - 0.12 13.1 21.8 0.39 11.5 0.8 4.3 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) MitMem_reg PF13012.6 gi|14521756|ref|NP_127232.1| - 0.12 12.8 14.5 7.9e+02 0.5 14.5 4.6 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function FlaC_arch PF05377.11 gi|14521756|ref|NP_127232.1| - 0.13 12.6 37.6 2.1 8.8 1.9 6.8 4 1 3 7 7 6 0 Flagella accessory protein C (FlaC) Rubrerythrin PF02915.17 gi|14521756|ref|NP_127232.1| - 0.14 12.5 4.3 0.094 13.1 1.7 2.1 2 0 0 2 2 1 0 Rubrerythrin Goodbye PF17109.5 gi|14521756|ref|NP_127232.1| - 0.15 12.5 11.4 5 7.6 0.3 4.2 2 2 2 4 4 4 0 fungal STAND N-terminal Goodbye domain DASH_Dam1 PF08653.10 gi|14521756|ref|NP_127232.1| - 0.26 11.1 13.0 0.77 9.6 0.1 5.7 5 2 0 6 6 6 0 DASH complex subunit Dam1 Cbl_N PF02262.16 gi|14521756|ref|NP_127232.1| - 0.31 11.1 2.6 0.74 9.8 0.3 2.5 2 2 0 2 2 2 0 CBL proto-oncogene N-terminal domain 1 AP_endonuc_2 PF01261.24 gi|14521756|ref|NP_127232.1| - 0.36 10.2 2.3 0.88 9.0 0.5 2.2 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel CorA PF01544.18 gi|14521756|ref|NP_127232.1| - 0.38 10.0 17.7 4.3 6.6 9.3 3.6 1 1 3 4 4 4 0 CorA-like Mg2+ transporter protein APG17 PF04108.12 gi|14521756|ref|NP_127232.1| - 0.38 9.8 22.7 0.18 10.9 5.8 3.7 2 2 3 5 5 5 0 Autophagy protein Apg17 TMPIT PF07851.13 gi|14521756|ref|NP_127232.1| - 0.43 9.8 16.2 0.1 11.8 1.2 3.3 1 1 3 4 4 4 0 TMPIT-like protein BAR_3 PF16746.5 gi|14521756|ref|NP_127232.1| - 0.44 10.2 14.9 0.13 11.9 7.7 3.0 2 2 0 2 2 2 0 BAR domain of APPL family DASH_Dad2 PF08654.10 gi|14521756|ref|NP_127232.1| - 0.46 10.9 18.6 3.8 8.0 3.3 5.1 1 1 2 5 5 5 0 DASH complex subunit Dad2 FUSC PF04632.12 gi|14521756|ref|NP_127232.1| - 0.47 8.9 1.3 0.96 7.9 0.8 1.4 1 1 0 1 1 1 0 Fusaric acid resistance protein family Glyco_tran_WbsX PF14307.6 gi|14521756|ref|NP_127232.1| - 0.47 9.8 2.3 0.75 9.2 0.5 1.8 1 1 1 2 2 2 0 Glycosyltransferase WbsX WXG100 PF06013.12 gi|14521756|ref|NP_127232.1| - 0.47 10.7 13.0 1.7 8.9 4.2 5.0 3 2 1 4 4 3 0 Proteins of 100 residues with WXG Atg14 PF10186.9 gi|14521756|ref|NP_127232.1| - 0.54 9.3 20.6 0.15 11.1 4.5 3.3 1 1 1 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 T3SSipB PF16535.5 gi|14521756|ref|NP_127232.1| - 0.55 10.7 11.4 0.33 11.4 3.1 3.4 1 1 2 3 3 3 0 Type III cell invasion protein SipB Sec34 PF04136.15 gi|14521756|ref|NP_127232.1| - 0.55 10.1 16.3 1.3 8.9 0.6 4.2 2 2 3 5 5 5 0 Sec34-like family CENP-F_leu_zip PF10473.9 gi|14521756|ref|NP_127232.1| - 0.57 10.2 30.2 2.6 8.1 9.4 4.1 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NYD-SP28 PF14772.6 gi|14521756|ref|NP_127232.1| - 0.65 10.1 20.3 0.29 11.2 0.3 5.2 2 1 2 5 5 5 0 Sperm tail TPR_MLP1_2 PF07926.12 gi|14521756|ref|NP_127232.1| - 0.66 10.1 20.0 5.7 7.0 6.1 3.7 2 2 0 3 3 3 0 TPR/MLP1/MLP2-like protein MerR-DNA-bind PF09278.11 gi|14521756|ref|NP_127232.1| - 0.77 10.3 7.6 38 4.9 0.8 4.4 5 0 0 5 5 3 0 MerR, DNA binding DUF4795 PF16043.5 gi|14521756|ref|NP_127232.1| - 1 8.9 26.0 6.6 6.3 3.2 3.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) NPV_P10 PF05531.12 gi|14521756|ref|NP_127232.1| - 1 9.8 26.8 6.1 7.4 3.1 5.6 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein SMBP PF16785.5 gi|14521756|ref|NP_127232.1| - 1.2 9.4 7.8 69 3.7 0.0 4.0 3 2 1 4 4 4 0 Small metal-binding protein FH2 PF02181.23 gi|14521756|ref|NP_127232.1| - 1.4 8.0 16.0 4.7 6.2 0.7 3.6 2 2 1 3 3 3 0 Formin Homology 2 Domain ParE-like_toxin PF15781.5 gi|14521756|ref|NP_127232.1| - 1.5 8.9 5.1 0.53 10.3 0.3 2.6 3 0 0 3 3 2 0 ParE-like toxin of type II bacterial toxin-antitoxin system Vps53_N PF04100.12 gi|14521756|ref|NP_127232.1| - 1.6 7.6 25.9 0.23 10.4 12.7 3.6 2 2 2 4 4 4 0 Vps53-like, N-terminal Hormone_1 PF00103.20 gi|14521756|ref|NP_127232.1| - 1.7 8.4 20.6 0.84 9.3 0.3 4.7 2 2 2 5 5 5 0 Somatotropin hormone family PhageMin_Tail PF10145.9 gi|14521756|ref|NP_127232.1| - 1.9 8.3 15.7 7.7 6.3 5.6 3.2 1 1 1 3 3 3 0 Phage-related minor tail protein CENP-Q PF13094.6 gi|14521756|ref|NP_127232.1| - 1.9 8.7 14.7 7.3 6.8 0.2 3.0 2 1 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit YkyA PF10368.9 gi|14521756|ref|NP_127232.1| - 1.9 8.1 30.3 0.29 10.8 7.9 4.7 2 2 1 3 3 3 0 Putative cell-wall binding lipoprotein DUF4088 PF13317.6 gi|14521756|ref|NP_127232.1| - 2 7.9 8.6 0.76 9.3 1.3 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF4088) LMBR1 PF04791.16 gi|14521756|ref|NP_127232.1| - 2.3 7.0 14.3 56 2.4 13.6 2.2 1 1 0 1 1 1 0 LMBR1-like membrane protein PSII_Pbs27 PF13326.6 gi|14521756|ref|NP_127232.1| - 2.3 8.5 6.9 7.4 6.9 2.0 3.1 2 1 0 2 2 1 0 Photosystem II Pbs27 FlgN PF05130.12 gi|14521756|ref|NP_127232.1| - 2.5 8.6 21.5 1.7 9.1 4.2 3.3 1 1 1 3 3 3 0 FlgN protein Nre_C PF04895.12 gi|14521756|ref|NP_127232.1| - 2.5 8.0 8.9 0.5 10.3 1.2 3.4 3 2 1 4 4 3 0 Archaeal Nre, C-terminal DUF3450 PF11932.8 gi|14521756|ref|NP_127232.1| - 2.7 7.2 22.9 0.42 9.9 1.7 3.8 1 1 1 3 3 3 0 Protein of unknown function (DUF3450) YabA PF06156.13 gi|14521756|ref|NP_127232.1| - 3 8.5 21.6 14 6.4 0.4 4.0 2 2 1 3 3 3 0 Initiation control protein YabA UPF0242 PF06785.11 gi|14521756|ref|NP_127232.1| - 3.6 7.6 22.8 2.4e+03 -1.6 0.0 3.7 1 1 0 2 2 0 0 Uncharacterised protein family (UPF0242) N-terminus Sigma70_ner PF04546.13 gi|14521756|ref|NP_127232.1| - 3.8 7.3 20.0 93 2.8 16.3 3.5 1 1 1 2 2 2 0 Sigma-70, non-essential region Mod_r PF07200.13 gi|14521756|ref|NP_127232.1| - 4.2 7.5 20.8 4.5 7.4 6.9 4.0 2 2 1 3 3 3 0 Modifier of rudimentary (Mod(r)) protein TetR_C_37 PF18665.1 gi|14521756|ref|NP_127232.1| - 4.3 8.0 7.2 0.79 10.4 1.2 2.7 2 2 1 4 4 1 0 Tetracyclin repressor-like, C-terminal domain DUF1759 PF03564.15 gi|14521756|ref|NP_127232.1| - 5.2 7.0 17.0 2.8 7.9 2.1 4.4 1 1 2 4 4 4 0 Protein of unknown function (DUF1759) BST2 PF16716.5 gi|14521756|ref|NP_127232.1| - 7.1 7.3 19.5 6.3 7.4 1.8 4.5 3 1 1 4 4 4 0 Bone marrow stromal antigen 2 DHR10 PF18595.1 gi|14521756|ref|NP_127232.1| - 7.8 6.6 29.2 0.98 9.5 2.4 5.2 2 2 3 5 5 5 0 Designed helical repeat protein 10 domain DUF1192 PF06698.11 gi|14521756|ref|NP_127232.1| - 8.1 6.6 14.9 6.6 6.9 2.4 4.5 4 0 0 4 4 4 0 Protein of unknown function (DUF1192) DUF2935 PF11155.8 gi|14521756|ref|NP_127232.1| - 8.3 6.8 11.0 25 5.2 2.8 3.7 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) CheW PF01584.19 gi|14521757|ref|NP_127233.1| - 5.9e-38 129.6 0.6 6.5e-38 129.5 0.6 1.0 1 0 0 1 1 1 1 CheW-like domain Baculo_PEP_C PF04513.12 gi|14521758|ref|NP_127234.1| - 9.6e-06 25.7 0.3 0.61 10.1 0.0 4.1 2 1 3 5 5 5 1 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 gi|14521758|ref|NP_127234.1| - 3.9e-05 24.0 5.8 0.22 12.0 0.1 4.7 2 2 1 3 3 3 1 Nucleopolyhedrovirus P10 protein APG17 PF04108.12 gi|14521758|ref|NP_127234.1| - 0.00013 21.3 9.1 0.00049 19.3 5.2 2.1 2 0 0 2 2 2 1 Autophagy protein Apg17 HMMR_N PF15905.5 gi|14521758|ref|NP_127234.1| - 0.00029 20.4 17.2 0.00029 20.4 17.2 2.0 2 0 0 2 2 2 1 Hyaluronan mediated motility receptor N-terminal DUF1664 PF07889.12 gi|14521758|ref|NP_127234.1| - 0.0013 18.8 12.8 0.025 14.6 0.8 3.8 2 2 1 3 3 3 1 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|14521758|ref|NP_127234.1| - 0.0014 18.8 5.4 0.078 13.2 0.1 4.6 5 1 0 5 5 3 1 Bacterial protein of unknown function (DUF948) Apolipoprotein PF01442.18 gi|14521758|ref|NP_127234.1| - 0.0019 18.1 15.4 0.046 13.6 11.7 3.1 2 1 0 2 2 2 1 Apolipoprotein A1/A4/E domain Spc7 PF08317.11 gi|14521758|ref|NP_127234.1| - 0.0032 16.4 3.8 0.0032 16.4 3.8 3.2 2 1 1 3 3 3 2 Spc7 kinetochore protein DUF3800 PF12686.7 gi|14521758|ref|NP_127234.1| - 0.0046 17.6 0.0 1.5 9.5 0.0 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3800) HemX PF04375.14 gi|14521758|ref|NP_127234.1| - 0.0047 16.3 4.8 0.32 10.3 0.3 2.9 2 1 1 3 3 3 1 HemX, putative uroporphyrinogen-III C-methyltransferase Bacillus_HBL PF05791.11 gi|14521758|ref|NP_127234.1| - 0.0075 16.1 9.3 0.014 15.3 0.4 3.4 4 0 0 4 4 3 1 Bacillus haemolytic enterotoxin (HBL) DUF4407 PF14362.6 gi|14521758|ref|NP_127234.1| - 0.011 15.1 0.7 0.011 15.1 0.7 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Syntaxin-6_N PF09177.11 gi|14521758|ref|NP_127234.1| - 0.031 14.8 1.7 0.031 14.8 1.7 3.7 2 2 1 3 3 3 0 Syntaxin 6, N-terminal DUF148 PF02520.17 gi|14521758|ref|NP_127234.1| - 0.032 14.3 4.9 0.6 10.2 0.2 3.4 3 0 0 3 3 3 0 Domain of unknown function DUF148 Exonuc_VII_L PF02601.15 gi|14521758|ref|NP_127234.1| - 0.045 13.3 6.7 0.16 11.6 1.7 2.8 1 1 0 3 3 3 0 Exonuclease VII, large subunit ApoO PF09769.9 gi|14521758|ref|NP_127234.1| - 0.062 13.3 2.8 0.088 12.8 0.2 2.6 3 1 0 3 3 1 0 Apolipoprotein O Fez1 PF06818.15 gi|14521758|ref|NP_127234.1| - 0.063 13.7 14.9 0.098 13.1 10.9 2.3 2 0 0 2 2 2 0 Fez1 YtxH PF12732.7 gi|14521758|ref|NP_127234.1| - 0.064 13.8 20.0 2.5 8.7 2.4 5.2 4 2 0 4 4 4 0 YtxH-like protein Fib_alpha PF08702.10 gi|14521758|ref|NP_127234.1| - 0.075 13.2 15.9 0.072 13.3 1.4 3.6 2 2 0 3 3 3 0 Fibrinogen alpha/beta chain family ApoLp-III PF07464.11 gi|14521758|ref|NP_127234.1| - 0.11 12.6 13.3 0.52 10.4 1.6 3.7 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Cytochrom_B562 PF07361.11 gi|14521758|ref|NP_127234.1| - 0.13 12.9 6.1 6.7 7.4 0.5 3.5 3 0 0 3 3 3 0 Cytochrome b562 Prominin PF05478.11 gi|14521758|ref|NP_127234.1| - 0.14 10.1 9.3 0.53 8.2 0.2 2.7 2 1 1 3 3 3 0 Prominin Laminin_II PF06009.12 gi|14521758|ref|NP_127234.1| - 0.16 12.0 12.6 0.14 12.1 2.9 4.0 2 1 2 4 4 4 0 Laminin Domain II BLOC1_2 PF10046.9 gi|14521758|ref|NP_127234.1| - 0.19 12.0 22.6 1.3 9.4 0.1 5.5 5 1 2 7 7 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FliT PF05400.13 gi|14521758|ref|NP_127234.1| - 0.2 12.5 15.6 2.1 9.2 1.9 4.1 4 0 0 4 4 3 0 Flagellar protein FliT GIT_CC PF16559.5 gi|14521758|ref|NP_127234.1| - 0.23 11.4 0.1 0.23 11.4 0.1 3.1 4 0 0 4 4 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DASH_Dad3 PF08656.10 gi|14521758|ref|NP_127234.1| - 0.26 11.4 8.3 13 6.0 0.0 4.5 3 1 0 3 3 3 0 DASH complex subunit Dad3 Tweety PF04906.13 gi|14521758|ref|NP_127234.1| - 0.26 9.9 3.4 1.3 7.7 0.0 2.8 2 1 1 3 3 3 0 Tweety DUF3584 PF12128.8 gi|14521758|ref|NP_127234.1| - 0.27 8.7 13.2 0.16 9.4 8.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) baeRF_family3 PF18845.1 gi|14521758|ref|NP_127234.1| - 0.28 11.5 8.3 0.04 14.2 3.3 2.1 2 1 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 3 DUF4363 PF14276.6 gi|14521758|ref|NP_127234.1| - 0.3 11.2 15.8 3.1 7.9 2.1 4.6 2 2 0 3 3 3 0 Domain of unknown function (DUF4363) ING PF12998.7 gi|14521758|ref|NP_127234.1| - 0.43 11.2 15.1 8.1 7.1 0.4 3.9 2 1 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding Matrilin_ccoil PF10393.9 gi|14521758|ref|NP_127234.1| - 0.55 10.1 5.1 6.4 6.7 0.0 4.1 4 1 0 4 4 3 0 Trimeric coiled-coil oligomerisation domain of matrilin PEP-utilisers_N PF05524.13 gi|14521758|ref|NP_127234.1| - 0.69 10.1 7.3 4.4e+02 1.1 6.7 3.4 2 2 1 3 3 3 0 PEP-utilising enzyme, N-terminal Fmp27_WPPW PF10359.9 gi|14521758|ref|NP_127234.1| - 0.75 8.6 11.1 0.077 11.8 4.4 2.4 2 1 1 3 3 3 0 RNA pol II promoter Fmp27 protein domain LXG PF04740.12 gi|14521758|ref|NP_127234.1| - 0.78 9.4 10.4 0.45 10.2 0.3 3.4 2 2 1 3 3 3 0 LXG domain of WXG superfamily DUF4795 PF16043.5 gi|14521758|ref|NP_127234.1| - 1 8.9 25.1 3.3 7.3 14.0 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4795) PKcGMP_CC PF16808.5 gi|14521758|ref|NP_127234.1| - 1.1 9.2 0.0 1.1 9.2 0.0 6.1 7 0 0 7 7 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase BST2 PF16716.5 gi|14521758|ref|NP_127234.1| - 1.4 9.5 0.0 1.4 9.5 0.0 3.9 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 MRP-S27 PF10037.9 gi|14521758|ref|NP_127234.1| - 1.9 7.2 10.4 1 8.1 6.4 2.2 2 1 0 2 2 2 0 Mitochondrial 28S ribosomal protein S27 UPF0242 PF06785.11 gi|14521758|ref|NP_127234.1| - 2.3 8.3 22.6 5 7.2 14.1 3.0 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Med30 PF11315.8 gi|14521758|ref|NP_127234.1| - 2.6 8.2 16.3 0.48 10.6 3.5 3.3 2 1 0 3 3 3 0 Mediator complex subunit 30 ATF7IP_BD PF16788.5 gi|14521758|ref|NP_127234.1| - 3 7.9 8.7 2 8.5 0.5 2.9 3 0 0 3 3 3 0 ATF-interacting protein binding domain DUF668 PF05003.12 gi|14521758|ref|NP_127234.1| - 3.6 8.1 5.2 11 6.6 0.4 3.3 4 0 0 4 4 3 0 Protein of unknown function (DUF668) COG2 PF06148.11 gi|14521758|ref|NP_127234.1| - 3.7 7.6 19.6 0.36 10.9 1.0 4.3 3 1 2 5 5 5 0 COG (conserved oligomeric Golgi) complex component, COG2 HSCB_C PF07743.13 gi|14521758|ref|NP_127234.1| - 4.3 7.9 29.4 6.5 7.3 7.1 4.2 2 1 1 3 3 3 0 HSCB C-terminal oligomerisation domain Tektin PF03148.14 gi|14521758|ref|NP_127234.1| - 4.5 5.9 16.1 0.047 12.4 7.4 1.9 2 0 0 2 2 2 0 Tektin family TPR_MLP1_2 PF07926.12 gi|14521758|ref|NP_127234.1| - 4.7 7.3 24.3 0.052 13.6 2.0 3.7 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein HAUS6_N PF14661.6 gi|14521758|ref|NP_127234.1| - 4.9 6.7 9.1 8.8 5.8 4.4 2.7 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF883 PF05957.13 gi|14521758|ref|NP_127234.1| - 5.1 7.8 12.1 6 7.5 0.2 4.4 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF883) TENA_THI-4 PF03070.16 gi|14521758|ref|NP_127234.1| - 6.2 6.6 7.5 14 5.4 0.4 2.9 4 0 0 4 4 3 0 TENA/THI-4/PQQC family DUF745 PF05335.13 gi|14521758|ref|NP_127234.1| - 8 6.1 7.3 3.8 7.2 0.6 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF745) Na_Ca_ex PF01699.24 gi|14521759|ref|NP_127235.1| - 3e-50 170.1 35.5 3.9e-25 88.6 15.7 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF2545 PF10810.8 gi|14521759|ref|NP_127235.1| - 2 8.6 17.5 0.12 12.5 0.6 4.3 4 1 1 5 5 5 0 Protein of unknown function (DUF2545) Prok-RING_1 PF14446.6 gi|14521760|ref|NP_127236.1| - 0.0014 18.5 0.2 0.0022 17.9 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 PHF5 PF03660.14 gi|14521760|ref|NP_127236.1| - 0.0036 17.5 0.1 0.0057 16.8 0.1 1.2 1 0 0 1 1 1 1 PHF5-like protein DZR PF12773.7 gi|14521760|ref|NP_127236.1| - 0.01 15.9 0.3 0.016 15.2 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|14521760|ref|NP_127236.1| - 0.02 14.4 2.0 0.031 13.8 1.3 1.7 2 0 0 2 2 2 0 TFIIB zinc-binding RPA_interact_C PF14768.6 gi|14521760|ref|NP_127236.1| - 0.046 14.3 0.3 0.077 13.6 0.3 1.3 1 0 0 1 1 1 0 Replication protein A interacting C-terminal Rad50_zn_hook PF04423.14 gi|14521760|ref|NP_127236.1| - 0.069 13.0 0.5 3 7.7 0.1 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif PhnA_Zn_Ribbon PF08274.12 gi|14521760|ref|NP_127236.1| - 0.13 12.2 0.8 0.28 11.2 0.8 1.5 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.6 gi|14521760|ref|NP_127236.1| - 0.13 11.7 2.6 0.37 10.3 2.6 1.7 1 1 0 1 1 1 0 zinc-ribbon domain zf-RING_2 PF13639.6 gi|14521760|ref|NP_127236.1| - 0.16 12.3 0.7 0.26 11.7 0.7 1.3 1 0 0 1 1 1 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 gi|14521760|ref|NP_127236.1| - 0.17 11.8 0.3 0.3 11.0 0.3 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain NfeD PF01957.18 gi|14521761|ref|NP_127237.1| - 8.3e-14 51.7 4.4 2.4e-13 50.3 4.4 1.8 1 1 0 1 1 1 1 NfeD-like C-terminal, partner-binding Intein_splicing PF14890.6 gi|14521761|ref|NP_127237.1| - 7e-05 22.8 0.0 9.1e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Intein splicing domain NMN_transporter PF04973.12 gi|14521761|ref|NP_127237.1| - 0.0064 16.5 0.5 0.0075 16.3 0.5 1.1 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter KOW PF00467.29 gi|14521761|ref|NP_127237.1| - 0.02 14.9 0.6 0.02 14.9 0.6 1.8 2 0 0 2 2 2 0 KOW motif 7TM_GPCR_Srh PF10318.9 gi|14521761|ref|NP_127237.1| - 0.16 10.9 6.1 0.2 10.6 6.1 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh UPF0139 PF03669.13 gi|14521761|ref|NP_127237.1| - 0.34 10.8 1.5 0.57 10.1 1.5 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) TctB PF07331.11 gi|14521761|ref|NP_127237.1| - 1.9 8.8 10.7 2.7 8.3 10.7 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Band_7 PF01145.25 gi|14521762|ref|NP_127238.1| - 3.6e-42 144.4 4.1 6e-42 143.7 4.1 1.4 1 1 0 1 1 1 1 SPFH domain / Band 7 family Flot PF15975.5 gi|14521762|ref|NP_127238.1| - 0.0038 17.4 4.5 0.0038 17.4 4.5 2.0 1 1 1 2 2 2 1 Flotillin Band_7_1 PF13421.6 gi|14521762|ref|NP_127238.1| - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family AbiEi_1 PF09407.10 gi|14521764|ref|NP_127240.1| - 0.12 12.7 0.0 0.22 11.8 0.0 1.4 1 1 0 1 1 1 0 AbiEi antitoxin C-terminal domain AbiEii PF08843.11 gi|14521765|ref|NP_127241.1| - 5.8e-25 88.6 0.3 7.3e-25 88.3 0.3 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase AbiEii toxin, Type IV TA system Lactamase_B_2 PF12706.7 gi|14521766|ref|NP_127242.1| - 7.8e-10 38.6 0.2 3.6e-05 23.4 0.2 3.2 2 1 0 3 3 3 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14521766|ref|NP_127242.1| - 1.3e-08 35.1 0.4 4e-07 30.2 0.1 2.6 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|14521766|ref|NP_127242.1| - 8.8e-05 22.4 0.0 0.0002 21.2 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_3 PF13483.6 gi|14521766|ref|NP_127242.1| - 0.00079 19.3 0.1 0.3 11.0 0.1 2.9 2 1 0 2 2 2 2 Beta-lactamase superfamily domain PDEase_II PF02112.15 gi|14521766|ref|NP_127242.1| - 0.18 10.9 0.1 0.3 10.2 0.1 1.3 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II GATase_4 PF13230.6 gi|14521768|ref|NP_127244.1| - 2.3e-55 187.4 0.0 2.8e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|14521768|ref|NP_127244.1| - 1.4e-05 25.3 0.0 3.2e-05 24.1 0.0 1.6 1 1 1 2 2 2 1 Glutamine amidotransferase domain Peptidase_M32 PF02074.15 gi|14521769|ref|NP_127245.1| - 2.9e-164 547.5 0.1 3.3e-164 547.3 0.1 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase Peptidase_M3 PF01432.20 gi|14521769|ref|NP_127245.1| - 0.25 10.6 2.7 12 5.1 0.0 2.9 3 0 0 3 3 3 0 Peptidase family M3 Peptidase_M50 PF02163.22 gi|14521770|ref|NP_127246.1| - 2.9e-09 36.6 9.4 1.4e-05 24.5 0.2 3.3 2 2 1 3 3 3 3 Peptidase family M50 KH_2 PF07650.17 gi|14521771|ref|NP_127247.1| - 0.00013 21.7 0.7 0.00015 21.5 0.7 1.1 1 0 0 1 1 1 1 KH domain CTP_transf_like PF01467.26 gi|14521772|ref|NP_127248.1| - 3e-18 66.4 0.0 6.3e-18 65.3 0.0 1.5 1 1 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|14521772|ref|NP_127248.1| - 0.12 11.6 0.0 1 8.5 0.0 1.9 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase SAM_adeno_trans PF01887.16 gi|14521773|ref|NP_127249.1| - 2.1e-76 256.5 0.0 2.4e-76 256.3 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase PDZ_6 PF17820.1 gi|14521773|ref|NP_127249.1| - 0.029 14.2 0.1 0.058 13.3 0.1 1.5 1 0 0 1 1 1 0 PDZ domain Transglut_core PF01841.19 gi|14521774|ref|NP_127250.1| - 1.4e-07 32.0 0.0 2.6e-07 31.1 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like superfamily N_BRCA1_IG PF16158.5 gi|14521774|ref|NP_127250.1| - 0.0036 18.0 0.0 0.011 16.4 0.0 1.9 2 1 0 2 2 2 1 Ig-like domain from next to BRCA1 gene Trm56 PF01994.16 gi|14521775|ref|NP_127251.1| - 8.6e-50 167.6 0.0 1.2e-49 167.1 0.0 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SPOUT_MTase_2 PF14419.6 gi|14521775|ref|NP_127251.1| - 0.00045 19.6 0.1 0.001 18.5 0.1 1.6 1 1 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP SpoU_methylase PF00588.19 gi|14521775|ref|NP_127251.1| - 0.046 13.9 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 SpoU rRNA Methylase family CDP-OH_P_transf PF01066.21 gi|14521776|ref|NP_127252.1| - 5e-14 52.8 1.3 5e-14 52.8 1.3 1.9 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase HAD_2 PF13419.6 gi|14521777|ref|NP_127253.1| - 1.2e-28 100.4 0.0 1.5e-28 100.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521777|ref|NP_127253.1| - 8.1e-17 62.2 0.0 1.4e-15 58.2 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14521777|ref|NP_127253.1| - 1.1e-10 41.4 0.0 5.5e-10 39.2 0.0 2.1 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 gi|14521777|ref|NP_127253.1| - 4.4e-07 30.5 0.0 6.9e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|14521777|ref|NP_127253.1| - 0.00077 18.9 0.0 0.0055 16.1 0.0 2.2 3 0 0 3 3 3 1 Putative Phosphatase PRD PF00874.20 gi|14521777|ref|NP_127253.1| - 0.049 13.9 4.0 1.8 8.9 0.1 3.2 1 1 2 3 3 3 0 PRD domain Haem_oxygenas_2 PF14518.6 gi|14521777|ref|NP_127253.1| - 0.061 13.1 0.0 18 5.0 0.0 3.0 2 1 1 3 3 3 0 Iron-containing redox enzyme 5_nucleotid PF05761.14 gi|14521777|ref|NP_127253.1| - 0.097 11.6 0.1 0.79 8.6 0.0 1.9 1 1 1 2 2 2 0 5' nucleotidase family NIF PF03031.18 gi|14521777|ref|NP_127253.1| - 0.12 12.1 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase AFOR_N PF02730.15 gi|14521778|ref|NP_127254.1| - 3.1e-39 134.9 0.0 1.4e-38 132.8 0.0 1.9 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain AFOR_C PF01314.18 gi|14521778|ref|NP_127254.1| - 5.2e-16 58.6 0.0 1.1e-15 57.6 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Glycos_transf_2 PF00535.26 gi|14521779|ref|NP_127255.1| - 4.6e-39 133.9 0.3 7.2e-39 133.3 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521779|ref|NP_127255.1| - 1.3e-30 107.0 0.0 1.6e-30 106.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|14521779|ref|NP_127255.1| - 1.8e-17 63.3 0.1 3.5e-17 62.4 0.0 1.4 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|14521779|ref|NP_127255.1| - 1.7e-14 54.2 4.0 3.6e-14 53.1 4.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|14521779|ref|NP_127255.1| - 1.3e-12 47.8 0.4 7.1e-12 45.4 0.4 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 gi|14521779|ref|NP_127255.1| - 1.1e-06 27.6 2.9 0.035 12.7 0.0 2.9 1 1 1 3 3 3 2 Chitin synthase NTP_transf_3 PF12804.7 gi|14521779|ref|NP_127255.1| - 1.1e-06 29.1 0.0 1.7e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glyco_tranf_2_4 PF13704.6 gi|14521779|ref|NP_127255.1| - 0.00017 22.1 0.0 0.00038 20.9 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 CofC PF01983.16 gi|14521779|ref|NP_127255.1| - 0.31 10.2 2.4 0.23 10.6 0.6 1.7 2 0 0 2 2 2 0 Guanylyl transferase CofC like Lon_C PF05362.13 gi|14521780|ref|NP_127256.1| - 2.1e-37 128.7 2.7 3.4e-37 128.0 2.7 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|14521780|ref|NP_127256.1| - 3.6e-27 95.3 0.0 1.9e-18 66.5 0.0 3.4 4 0 0 4 4 4 2 AAA domain Sigma54_activat PF00158.26 gi|14521780|ref|NP_127256.1| - 5.6e-17 61.9 0.1 2.3e-10 40.4 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|14521780|ref|NP_127256.1| - 5.7e-17 61.8 0.1 9.2e-09 35.0 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|14521780|ref|NP_127256.1| - 7.6e-11 42.2 0.0 0.00057 19.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.6 gi|14521780|ref|NP_127256.1| - 2.9e-10 40.0 0.6 6.4e-10 38.9 0.6 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase MCM PF00493.23 gi|14521780|ref|NP_127256.1| - 1.5e-06 27.5 0.0 0.052 12.6 0.0 2.4 2 0 0 2 2 2 2 MCM P-loop domain AAA PF00004.29 gi|14521780|ref|NP_127256.1| - 1.6e-06 28.6 0.0 0.082 13.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|14521780|ref|NP_127256.1| - 4.1e-06 26.6 0.1 0.038 13.7 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|14521780|ref|NP_127256.1| - 6.2e-06 26.5 0.0 0.001 19.4 0.0 3.0 3 0 0 3 3 3 1 AAA domain Sigma54_activ_2 PF14532.6 gi|14521780|ref|NP_127256.1| - 6.4e-05 23.1 0.0 0.5 10.5 0.0 2.7 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.11 gi|14521780|ref|NP_127256.1| - 0.00011 22.1 0.0 0.083 12.8 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|14521780|ref|NP_127256.1| - 0.0007 19.2 0.0 0.0015 18.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_30 PF13604.6 gi|14521780|ref|NP_127256.1| - 0.0016 18.2 0.0 0.068 12.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|14521780|ref|NP_127256.1| - 0.0017 18.8 0.0 0.0073 16.7 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 gi|14521780|ref|NP_127256.1| - 0.0068 16.7 0.0 2.1 8.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|14521780|ref|NP_127256.1| - 0.033 14.1 0.0 0.078 12.9 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_lid_3 PF17862.1 gi|14521780|ref|NP_127256.1| - 0.045 13.6 0.0 0.36 10.7 0.0 2.5 2 0 0 2 2 2 0 AAA+ lid domain AAA_PrkA PF08298.11 gi|14521780|ref|NP_127256.1| - 0.07 12.0 0.0 1.4 7.8 0.0 2.2 2 0 0 2 2 2 0 PrkA AAA domain IstB_IS21 PF01695.17 gi|14521780|ref|NP_127256.1| - 0.12 12.1 0.0 0.39 10.4 0.0 1.8 2 0 0 2 2 1 0 IstB-like ATP binding protein DUF815 PF05673.13 gi|14521780|ref|NP_127256.1| - 0.16 11.1 0.0 0.55 9.4 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_29 PF13555.6 gi|14521780|ref|NP_127256.1| - 0.17 11.7 0.0 0.44 10.3 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain Parvo_NS1 PF01057.17 gi|14521780|ref|NP_127256.1| - 0.17 10.9 0.0 0.33 10.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF443 PF04276.12 gi|14521780|ref|NP_127256.1| - 1.9 8.3 4.2 3.4 7.4 4.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Prok-JAB PF14464.6 gi|14521781|ref|NP_127257.1| - 9e-08 31.9 0.0 1.6e-07 31.1 0.0 1.4 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain ResIII PF04851.15 gi|14521782|ref|NP_127258.1| - 1.6e-29 103.1 0.0 3.6e-29 102.0 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|14521782|ref|NP_127258.1| - 5.7e-18 65.0 0.0 1.1e-17 64.1 0.0 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase XPB_DRD PF18458.1 gi|14521782|ref|NP_127258.1| - 7.7e-18 64.1 1.0 2.3e-17 62.6 1.0 1.9 1 0 0 1 1 1 1 Xeroderma pigmentosum group B helicase damage recognition domain Helicase_C PF00271.31 gi|14521782|ref|NP_127258.1| - 5.5e-17 62.1 0.1 1.2e-16 61.0 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|14521782|ref|NP_127258.1| - 4.1e-08 33.2 0.0 2.9e-07 30.4 0.0 2.2 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|14521782|ref|NP_127258.1| - 0.018 15.3 0.0 0.25 11.6 0.0 2.7 3 1 0 3 3 3 0 AAA domain TsaE PF02367.17 gi|14521782|ref|NP_127258.1| - 0.11 12.5 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF790 PF05626.11 gi|14521783|ref|NP_127259.1| - 4.1e-116 387.9 9.5 4.6e-116 387.7 9.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF790) DUF1064 PF06356.11 gi|14521783|ref|NP_127259.1| - 0.037 14.4 0.2 0.1 12.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1064) Surfac_D-trimer PF09006.11 gi|14521783|ref|NP_127259.1| - 0.13 12.2 0.2 0.23 11.4 0.2 1.5 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation ASCH PF04266.14 gi|14521784|ref|NP_127260.1| - 3.1e-17 63.1 0.1 1.7e-16 60.8 0.0 1.9 2 0 0 2 2 2 1 ASCH domain SAP30_Sin3_bdg PF13867.6 gi|14521784|ref|NP_127260.1| - 0.084 13.2 0.0 0.23 11.8 0.0 1.7 1 0 0 1 1 1 0 Sin3 binding region of histone deacetylase complex subunit SAP30 M20_dimer PF07687.14 gi|14521784|ref|NP_127260.1| - 0.17 11.8 0.0 0.69 9.9 0.0 2.0 2 0 0 2 2 2 0 Peptidase dimerisation domain ASCH PF04266.14 gi|14521785|ref|NP_127261.1| - 7.1e-13 49.1 0.1 8.2e-13 48.9 0.1 1.1 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.7 gi|14521785|ref|NP_127261.1| - 0.014 15.4 0.1 0.019 15.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3850) Arc_PepC PF06819.11 gi|14521786|ref|NP_127262.1| - 1e-27 96.5 2.1 1.7e-27 95.7 2.1 1.4 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminal Domain Arc_PepC_II PF06847.11 gi|14521786|ref|NP_127262.1| - 2.5e-05 24.7 0.0 2.5e-05 24.7 0.0 2.9 4 0 0 4 4 4 1 Archaeal Peptidase A24 C-terminus Type II RIO1 PF01163.22 gi|14521787|ref|NP_127263.1| - 5.8e-17 61.9 0.1 7.2e-17 61.6 0.1 1.2 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|14521787|ref|NP_127263.1| - 9.7e-16 57.9 0.5 1.1e-15 57.7 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|14521787|ref|NP_127263.1| - 1.4e-14 54.0 0.1 1.9e-14 53.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.17 gi|14521787|ref|NP_127263.1| - 1.2e-12 47.7 0.1 1.4e-12 47.4 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 gi|14521787|ref|NP_127263.1| - 2.7e-11 43.9 0.1 2.3e-05 24.5 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family WaaY PF06176.11 gi|14521787|ref|NP_127263.1| - 3.6e-05 23.5 0.1 4.9e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Choline_kinase PF01633.20 gi|14521787|ref|NP_127263.1| - 0.011 15.4 0.0 0.1 12.1 0.0 1.8 1 1 1 2 2 2 0 Choline/ethanolamine kinase AceK PF06315.11 gi|14521787|ref|NP_127263.1| - 0.015 13.8 0.1 0.019 13.4 0.1 1.1 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) FTA2 PF13095.6 gi|14521787|ref|NP_127263.1| - 0.015 14.9 0.1 0.084 12.5 0.1 2.0 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 gi|14521787|ref|NP_127263.1| - 0.039 12.7 0.1 0.11 11.2 0.0 1.5 1 1 1 2 2 2 0 Fungal protein kinase EcKinase PF02958.20 gi|14521787|ref|NP_127263.1| - 0.083 12.2 0.0 0.14 11.5 0.0 1.5 1 1 0 1 1 1 0 Ecdysteroid kinase MCPsignal PF00015.21 gi|14521788|ref|NP_127264.1| - 9.8e-41 139.4 51.3 1.4e-36 125.9 21.0 4.6 1 1 3 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain Laminin_II PF06009.12 gi|14521788|ref|NP_127264.1| - 2.4e-05 24.3 41.1 0.01 15.9 6.1 5.3 1 1 1 4 4 4 2 Laminin Domain II DUF1664 PF07889.12 gi|14521788|ref|NP_127264.1| - 7.2e-05 22.8 39.9 0.11 12.5 4.1 5.2 3 1 2 5 5 5 3 Protein of unknown function (DUF1664) WXG100 PF06013.12 gi|14521788|ref|NP_127264.1| - 0.00076 19.7 29.6 0.6 10.4 0.1 6.5 3 2 3 7 7 7 2 Proteins of 100 residues with WXG Fib_alpha PF08702.10 gi|14521788|ref|NP_127264.1| - 0.0027 17.9 36.2 0.028 14.6 4.2 4.9 2 2 3 5 5 5 3 Fibrinogen alpha/beta chain family DUF948 PF06103.11 gi|14521788|ref|NP_127264.1| - 0.0029 17.8 31.5 0.17 12.2 1.5 5.8 2 2 3 5 5 5 2 Bacterial protein of unknown function (DUF948) IFT57 PF10498.9 gi|14521788|ref|NP_127264.1| - 0.0052 15.8 11.1 0.0052 15.8 11.1 3.7 3 1 1 4 4 4 1 Intra-flagellar transport protein 57 DUF1043 PF06295.12 gi|14521788|ref|NP_127264.1| - 0.0054 16.7 10.4 0.2 11.7 0.0 4.1 3 2 0 3 3 3 1 Protein of unknown function (DUF1043) Syntaxin_2 PF14523.6 gi|14521788|ref|NP_127264.1| - 0.0091 16.3 27.4 16 5.9 7.8 5.9 1 1 3 4 4 4 0 Syntaxin-like protein Syntaxin-6_N PF09177.11 gi|14521788|ref|NP_127264.1| - 0.01 16.4 4.3 0.01 16.4 4.3 4.9 1 1 3 4 4 4 0 Syntaxin 6, N-terminal Laminin_I PF06008.14 gi|14521788|ref|NP_127264.1| - 0.023 14.4 42.7 0.23 11.1 9.4 4.7 1 1 4 5 5 5 0 Laminin Domain I COG5 PF10392.9 gi|14521788|ref|NP_127264.1| - 0.037 14.2 26.7 0.087 13.0 1.6 5.0 3 2 1 4 4 4 0 Golgi transport complex subunit 5 Flagellin_IN PF07196.13 gi|14521788|ref|NP_127264.1| - 0.051 13.8 4.0 12 6.2 0.0 3.8 3 0 0 3 3 3 0 Flagellin hook IN motif SnoaL_3 PF13474.6 gi|14521788|ref|NP_127264.1| - 0.065 13.5 2.3 7.6 6.8 0.1 3.2 2 1 1 3 3 3 0 SnoaL-like domain BLOC1_2 PF10046.9 gi|14521788|ref|NP_127264.1| - 0.13 12.6 39.5 0.31 11.3 2.8 6.5 3 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HAMP PF00672.25 gi|14521788|ref|NP_127264.1| - 0.16 12.4 3.6 4 7.9 0.1 4.6 2 2 1 3 3 3 0 HAMP domain DUF812 PF05667.11 gi|14521788|ref|NP_127264.1| - 0.19 10.6 47.5 0.066 12.1 14.0 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF812) HisKA_3 PF07730.13 gi|14521788|ref|NP_127264.1| - 0.19 12.2 25.4 0.46 11.0 1.0 6.4 3 2 4 7 7 7 0 Histidine kinase CheZ PF04344.13 gi|14521788|ref|NP_127264.1| - 0.22 11.4 27.4 0.22 11.4 7.4 3.3 1 1 2 3 3 3 0 Chemotaxis phosphatase, CheZ T7SS_ESX_EspC PF10824.8 gi|14521788|ref|NP_127264.1| - 0.23 12.0 19.8 0.22 12.0 0.3 5.0 2 1 3 5 5 4 0 Excreted virulence factor EspC, type VII ESX diderm DUF4201 PF13870.6 gi|14521788|ref|NP_127264.1| - 0.23 11.2 0.1 0.23 11.2 0.1 3.8 3 2 0 4 4 3 0 Domain of unknown function (DUF4201) Mce4_CUP1 PF11887.8 gi|14521788|ref|NP_127264.1| - 0.29 10.6 5.2 0.94 8.9 0.2 3.0 1 1 2 3 3 3 0 Cholesterol uptake porter CUP1 of Mce4, putative Syntaxin PF00804.25 gi|14521788|ref|NP_127264.1| - 0.33 10.6 37.3 0.66 9.6 5.1 4.7 1 1 3 4 4 4 0 Syntaxin Goodbye PF17109.5 gi|14521788|ref|NP_127264.1| - 0.34 11.3 18.4 0.44 11.0 0.1 4.8 2 1 1 5 5 4 0 fungal STAND N-terminal Goodbye domain DUF4618 PF15397.6 gi|14521788|ref|NP_127264.1| - 0.49 9.8 39.6 0.5 9.7 15.4 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) EIAV_Rev PF11129.8 gi|14521788|ref|NP_127264.1| - 0.58 10.4 4.3 18 5.6 0.1 2.8 1 1 0 2 2 2 0 Rev protein of equine infectious anaemia virus ArAE_2_N PF10337.9 gi|14521788|ref|NP_127264.1| - 0.73 8.8 21.0 0.54 9.2 5.3 2.8 2 1 1 3 3 3 0 Putative ER transporter, 6TM, N-terminal FlgN PF05130.12 gi|14521788|ref|NP_127264.1| - 0.94 10.0 33.7 0.052 14.0 2.0 4.1 1 1 3 4 4 4 0 FlgN protein Spc7 PF08317.11 gi|14521788|ref|NP_127264.1| - 0.95 8.3 43.4 0.018 14.0 13.3 3.3 1 1 3 4 4 4 0 Spc7 kinetochore protein Vps51 PF08700.11 gi|14521788|ref|NP_127264.1| - 2 8.5 26.5 2.2 8.4 4.2 6.9 6 2 0 6 6 6 0 Vps51/Vps67 RecG_N PF17190.4 gi|14521788|ref|NP_127264.1| - 2.4 8.9 23.3 3 8.6 1.4 5.0 3 2 1 5 5 4 0 RecG N-terminal helical domain IKKbetaNEMObind PF12179.8 gi|14521788|ref|NP_127264.1| - 3.2 7.9 12.9 0.27 11.3 0.4 4.4 3 1 0 3 3 3 0 I-kappa-kinase-beta NEMO binding domain Vps53_N PF04100.12 gi|14521788|ref|NP_127264.1| - 3.2 6.6 42.0 1.1 8.1 10.8 4.5 2 2 2 4 4 4 0 Vps53-like, N-terminal DUF725 PF05267.12 gi|14521788|ref|NP_127264.1| - 7.2 6.6 12.5 0.6 10.1 1.3 3.5 3 2 0 3 3 3 0 Protein of unknown function (DUF725) HHH_8 PF14716.6 gi|14521788|ref|NP_127264.1| - 9.7 6.6 13.3 4.3 7.8 0.4 4.7 5 1 0 5 5 4 0 Helix-hairpin-helix domain MutS_V PF00488.21 gi|14521789|ref|NP_127265.1| - 3e-07 30.7 0.0 4.7e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 MutS domain V AAA_21 PF13304.6 gi|14521789|ref|NP_127265.1| - 0.0002 21.3 0.2 0.16 11.8 0.0 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_14 PF13173.6 gi|14521789|ref|NP_127265.1| - 0.0024 17.9 0.0 0.01 15.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14521789|ref|NP_127265.1| - 0.0072 16.8 0.0 0.021 15.3 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) CPT PF07931.12 gi|14521789|ref|NP_127265.1| - 0.018 14.9 0.0 0.039 13.8 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_28 PF13521.6 gi|14521789|ref|NP_127265.1| - 0.078 13.2 0.1 0.19 12.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF3662 PF12401.8 gi|14521789|ref|NP_127265.1| - 0.081 13.3 2.5 12 6.3 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2662) Arg_decarbox_C PF17944.1 gi|14521789|ref|NP_127265.1| - 0.12 13.0 1.9 1 10.0 0.1 3.2 3 0 0 3 3 3 0 Arginine decarboxylase C-terminal helical extension AAA_16 PF13191.6 gi|14521789|ref|NP_127265.1| - 0.19 12.1 0.9 4 7.8 0.1 3.1 2 2 0 2 2 2 0 AAA ATPase domain dNK PF01712.19 gi|14521789|ref|NP_127265.1| - 1.1 9.1 0.0 1.1 9.1 0.0 2.4 3 0 0 3 3 3 0 Deoxynucleoside kinase IF-2B PF01008.17 gi|14521790|ref|NP_127266.1| - 5.7e-52 176.7 0.0 2e-51 174.9 0.0 1.8 1 1 0 1 1 1 1 Initiation factor 2 subunit family DeoRC PF00455.22 gi|14521790|ref|NP_127266.1| - 0.06 13.3 0.0 0.23 11.4 0.0 1.9 2 0 0 2 2 2 0 DeoR C terminal sensor domain MoCF_biosynth PF00994.24 gi|14521791|ref|NP_127267.1| - 7.8e-37 126.1 0.0 1.3e-36 125.4 0.0 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain NIL PF09383.10 gi|14521791|ref|NP_127267.1| - 0.038 13.8 0.0 6.8 6.6 0.0 2.4 2 0 0 2 2 2 0 NIL domain B12-binding PF02310.19 gi|14521791|ref|NP_127267.1| - 0.12 12.4 0.0 0.36 10.9 0.0 1.8 2 0 0 2 2 2 0 B12 binding domain Hydrolase_4 PF12146.8 gi|14521792|ref|NP_127268.1| - 5.3e-69 232.1 0.0 6e-69 231.9 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|14521792|ref|NP_127268.1| - 2e-24 86.6 0.0 3.4e-17 62.9 0.0 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|14521792|ref|NP_127268.1| - 3.3e-18 67.1 0.0 4.2e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|14521792|ref|NP_127268.1| - 1e-08 35.0 0.0 0.00013 21.5 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 gi|14521792|ref|NP_127268.1| - 1.4e-05 25.0 0.0 0.001 18.9 0.0 2.6 2 1 0 2 2 2 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|14521792|ref|NP_127268.1| - 2.5e-05 24.0 0.0 0.00047 19.8 0.0 2.4 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.18 gi|14521792|ref|NP_127268.1| - 4.4e-05 23.1 0.1 0.0017 17.9 0.0 2.4 2 1 0 2 2 2 1 Dienelactone hydrolase family FSH1 PF03959.13 gi|14521792|ref|NP_127268.1| - 8.2e-05 22.4 0.0 0.00022 20.9 0.0 1.6 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_2 PF02230.16 gi|14521792|ref|NP_127268.1| - 0.00046 20.0 0.3 2.1 8.1 0.0 3.2 2 1 0 3 3 3 1 Phospholipase/Carboxylesterase Thioesterase PF00975.20 gi|14521792|ref|NP_127268.1| - 0.00075 19.7 0.0 0.0012 19.0 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain PhoPQ_related PF10142.9 gi|14521792|ref|NP_127268.1| - 0.0012 17.5 0.0 0.0018 17.0 0.0 1.2 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein Ser_hydrolase PF06821.13 gi|14521792|ref|NP_127268.1| - 0.0014 18.5 0.0 0.0054 16.6 0.0 1.8 2 0 0 2 2 2 1 Serine hydrolase Abhydrolase_4 PF08386.10 gi|14521792|ref|NP_127268.1| - 0.0021 18.2 0.0 0.0053 16.9 0.0 1.6 2 0 0 2 2 2 1 TAP-like protein BAAT_C PF08840.11 gi|14521792|ref|NP_127268.1| - 0.0034 17.3 0.0 0.0062 16.5 0.0 1.4 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal AXE1 PF05448.12 gi|14521792|ref|NP_127268.1| - 0.014 14.1 0.0 0.076 11.7 0.0 2.1 2 1 1 3 3 3 0 Acetyl xylan esterase (AXE1) UPF0227 PF05728.12 gi|14521792|ref|NP_127268.1| - 0.037 14.0 0.0 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Esterase PF00756.20 gi|14521792|ref|NP_127268.1| - 0.041 13.5 0.0 0.092 12.4 0.0 1.6 1 1 1 2 2 2 0 Putative esterase LCAT PF02450.15 gi|14521792|ref|NP_127268.1| - 0.12 11.5 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase Adenylsucc_synt PF00709.21 gi|14521793|ref|NP_127269.1| - 1.1e-90 304.6 3.2 9.6e-44 149.9 0.1 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase CytochromB561_N PF09786.9 gi|14521793|ref|NP_127269.1| - 0.016 14.2 0.0 0.021 13.9 0.0 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Sua5_yciO_yrdC PF01300.18 gi|14521794|ref|NP_127270.1| - 7.5e-61 204.7 0.0 1.1e-60 204.2 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|14521794|ref|NP_127270.1| - 2.1e-35 122.2 0.0 3.3e-35 121.6 0.0 1.3 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding Glyco_transf_4 PF13439.6 gi|14521795|ref|NP_127271.1| - 2.7e-28 99.1 0.5 3.8e-28 98.6 0.5 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|14521795|ref|NP_127271.1| - 5.6e-24 84.6 0.0 3.8e-23 81.9 0.0 2.2 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|14521795|ref|NP_127271.1| - 2e-21 76.8 0.0 9.7e-20 71.4 0.0 2.6 2 1 0 3 3 3 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|14521795|ref|NP_127271.1| - 3.2e-20 73.2 0.5 1.2e-19 71.4 0.5 1.9 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|14521795|ref|NP_127271.1| - 1.3e-14 54.4 0.0 1.9e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|14521795|ref|NP_127271.1| - 1.4e-05 25.4 0.0 3.8e-05 24.0 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF3492 PF11997.8 gi|14521795|ref|NP_127271.1| - 0.0006 19.6 2.0 0.021 14.5 0.5 2.9 2 1 0 3 3 3 1 Domain of unknown function (DUF3492) Glyco_transf_5 PF08323.11 gi|14521795|ref|NP_127271.1| - 0.0036 17.0 0.2 0.12 12.1 0.0 2.6 1 1 0 2 2 2 1 Starch synthase catalytic domain Peptidase_S9 PF00326.21 gi|14521796|ref|NP_127272.1| - 1.7e-59 200.9 0.0 2.5e-59 200.3 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PD40 PF07676.12 gi|14521796|ref|NP_127272.1| - 2.7e-08 33.6 0.7 1e-06 28.5 0.1 3.2 3 0 0 3 3 3 1 WD40-like Beta Propeller Repeat AXE1 PF05448.12 gi|14521796|ref|NP_127272.1| - 4.5e-08 32.1 0.1 2e-06 26.7 0.1 2.1 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S15 PF02129.18 gi|14521796|ref|NP_127272.1| - 4.6e-08 33.0 0.0 4.1e-06 26.6 0.0 2.2 1 1 1 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) DUF5050 PF16472.5 gi|14521796|ref|NP_127272.1| - 4.9e-05 22.7 0.0 0.0017 17.7 0.0 2.5 3 0 0 3 3 3 1 Domain of unknown function (DUF5050) DLH PF01738.18 gi|14521796|ref|NP_127272.1| - 0.0012 18.4 0.0 0.0038 16.8 0.0 1.8 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|14521796|ref|NP_127272.1| - 0.0013 18.5 0.1 0.0035 17.0 0.1 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2920 PF11144.8 gi|14521796|ref|NP_127272.1| - 0.0019 17.4 0.0 0.035 13.3 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2920) Hydrolase_4 PF12146.8 gi|14521796|ref|NP_127272.1| - 0.006 15.9 0.2 0.92 8.7 0.0 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 WYL PF13280.6 gi|14521796|ref|NP_127272.1| - 0.0085 16.2 0.5 0.24 11.4 0.0 2.7 2 1 1 3 3 3 1 WYL domain DPPIV_N PF00930.21 gi|14521796|ref|NP_127272.1| - 0.0099 14.7 0.0 2.8 6.6 0.0 3.2 2 1 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region PhoPQ_related PF10142.9 gi|14521796|ref|NP_127272.1| - 0.095 11.3 0.0 0.24 10.0 0.0 1.5 2 0 0 2 2 2 0 PhoPQ-activated pathogenicity-related protein Epimerase PF01370.21 gi|14521797|ref|NP_127273.1| - 1.2e-54 185.3 0.0 1.5e-54 185.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|14521797|ref|NP_127273.1| - 1.8e-52 178.8 0.0 3.6e-52 177.8 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|14521797|ref|NP_127273.1| - 4.8e-24 84.8 0.0 6.2e-24 84.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|14521797|ref|NP_127273.1| - 8.5e-19 67.7 0.0 1.1e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|14521797|ref|NP_127273.1| - 1.5e-17 63.7 0.0 1.5e-16 60.4 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|14521797|ref|NP_127273.1| - 3.4e-12 46.1 0.1 7.2e-10 38.5 0.1 2.6 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 gi|14521797|ref|NP_127273.1| - 8.5e-12 45.1 0.0 2.8e-09 36.9 0.0 2.1 2 0 0 2 2 2 2 NmrA-like family NAD_binding_10 PF13460.6 gi|14521797|ref|NP_127273.1| - 9.5e-11 41.9 0.0 1.3e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|14521797|ref|NP_127273.1| - 9.9e-08 31.7 0.0 4.5e-07 29.5 0.0 1.9 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.10 gi|14521797|ref|NP_127273.1| - 0.00062 19.7 0.2 0.0049 16.8 0.2 2.1 1 1 0 1 1 1 1 KR domain TrkA_N PF02254.18 gi|14521797|ref|NP_127273.1| - 0.021 15.0 0.0 0.044 14.1 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Ldh_1_N PF00056.23 gi|14521797|ref|NP_127273.1| - 0.024 14.7 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 gi|14521797|ref|NP_127273.1| - 0.066 13.9 0.0 0.14 12.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NAD_binding_2 PF03446.15 gi|14521797|ref|NP_127273.1| - 0.13 12.4 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NTP_transferase PF00483.23 gi|14521798|ref|NP_127274.1| - 2.6e-39 135.3 0.0 3.1e-39 135.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|14521798|ref|NP_127274.1| - 1.8e-12 47.9 0.0 2.4e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|14521798|ref|NP_127274.1| - 1.7e-06 27.6 2.8 0.00052 19.6 0.2 3.8 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) DUF58 PF01882.18 gi|14521799|ref|NP_127275.1| - 1.7e-24 85.9 0.1 2.9e-24 85.2 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA PF00092.28 gi|14521799|ref|NP_127275.1| - 0.018 15.3 0.0 0.029 14.6 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain VWA_2 PF13519.6 gi|14521799|ref|NP_127275.1| - 0.023 15.4 0.0 0.045 14.4 0.0 1.5 1 0 0 1 1 1 0 von Willebrand factor type A domain AAA_3 PF07726.11 gi|14521800|ref|NP_127276.1| - 9.8e-62 206.6 0.0 1.5e-61 206.1 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|14521800|ref|NP_127276.1| - 7.5e-19 67.3 0.1 1.5e-18 66.4 0.1 1.5 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|14521800|ref|NP_127276.1| - 1.4e-16 60.8 0.0 2.6e-16 59.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|14521800|ref|NP_127276.1| - 6.5e-07 29.8 0.0 2.8e-06 27.8 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|14521800|ref|NP_127276.1| - 2.3e-05 23.6 0.0 3.9e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain RuvB_N PF05496.12 gi|14521800|ref|NP_127276.1| - 3.3e-05 23.7 0.5 0.00096 18.9 0.1 2.8 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|14521800|ref|NP_127276.1| - 5.5e-05 22.6 0.6 0.042 13.2 0.1 2.4 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|14521800|ref|NP_127276.1| - 0.00012 21.8 0.2 0.0022 17.7 0.2 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain CbiA PF01656.23 gi|14521800|ref|NP_127276.1| - 0.016 15.3 0.1 0.2 11.7 0.1 2.2 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 gi|14521800|ref|NP_127276.1| - 0.026 14.9 0.0 0.15 12.4 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain Apo-VLDL-II PF05418.11 gi|14521800|ref|NP_127276.1| - 0.051 14.1 0.0 2.8 8.6 0.0 2.7 2 1 0 2 2 2 0 Apovitellenin I (Apo-VLDL-II) AAA_22 PF13401.6 gi|14521800|ref|NP_127276.1| - 0.084 13.1 0.0 0.47 10.7 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|14521800|ref|NP_127276.1| - 0.089 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain EthD PF07110.11 gi|14521800|ref|NP_127276.1| - 0.11 13.7 0.0 0.21 12.7 0.0 1.5 1 0 0 1 1 1 0 EthD domain AAA_18 PF13238.6 gi|14521800|ref|NP_127276.1| - 0.14 12.7 0.0 0.28 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF4350 PF14258.6 gi|14521801|ref|NP_127277.1| - 9.3e-11 42.0 0.0 1.8e-10 41.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4350) ABC_transp_aux PF09822.9 gi|14521801|ref|NP_127277.1| - 0.05 13.1 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 ABC-type uncharacterized transport system DUF2312 PF10073.9 gi|14521801|ref|NP_127277.1| - 0.052 13.2 0.1 0.12 12.0 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) mTERF PF02536.14 gi|14521801|ref|NP_127277.1| - 0.07 12.0 0.4 0.11 11.4 0.4 1.3 1 0 0 1 1 1 0 mTERF Big_3_5 PF16640.5 gi|14521802|ref|NP_127278.1| - 2.5e-10 40.4 0.5 1.7e-05 24.9 0.1 3.3 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 3) CarboxypepD_reg PF13620.6 gi|14521802|ref|NP_127278.1| - 0.00083 19.6 0.3 0.014 15.6 0.0 2.7 3 0 0 3 3 3 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|14521802|ref|NP_127278.1| - 0.0015 18.5 0.7 0.36 10.9 0.0 2.7 2 0 0 2 2 2 2 CarboxypepD_reg-like domain Big_1 PF02369.16 gi|14521802|ref|NP_127278.1| - 0.065 13.2 0.0 0.18 11.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) DUF4129 PF13559.6 gi|14521802|ref|NP_127278.1| - 0.18 12.1 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4129) Peptidase_C65 PF10275.9 gi|14521803|ref|NP_127279.1| - 0.068 12.6 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Peptidase C65 Otubain DUF1616 PF07760.11 gi|14521804|ref|NP_127280.1| - 5.9e-94 314.7 0.1 6.5e-94 314.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Zn_peptidase_2 PF04298.12 gi|14521804|ref|NP_127280.1| - 0.062 12.7 0.8 0.1 12.0 0.8 1.3 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase 7TMR-DISM_7TM PF07695.11 gi|14521804|ref|NP_127280.1| - 0.57 10.0 12.6 0.37 10.7 9.0 2.1 2 0 0 2 2 2 0 7TM diverse intracellular signalling DUF4870 PF09685.10 gi|14521804|ref|NP_127280.1| - 7.9 6.6 17.2 0.63 10.2 9.5 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4870) Hydrolase_6 PF13344.6 gi|14521805|ref|NP_127281.1| - 1e-29 102.6 0.0 9.5e-29 99.5 0.0 2.1 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14521805|ref|NP_127281.1| - 5.5e-21 74.4 0.0 2.8e-20 72.2 0.0 2.1 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|14521805|ref|NP_127281.1| - 1.5e-09 38.5 0.0 5.6e-09 36.6 0.0 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|14521805|ref|NP_127281.1| - 1.6e-07 31.6 2.2 0.0018 18.4 0.0 3.2 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 gi|14521805|ref|NP_127281.1| - 0.0008 19.1 0.0 0.0028 17.3 0.0 2.0 3 0 0 3 3 3 1 Mitochondrial PGP phosphatase Ribonuc_red_lgC PF02867.15 gi|14521806|ref|NP_127282.1| - 5.9e-217 721.3 2.8 1.7e-207 690.1 0.0 3.8 4 0 0 4 4 4 3 Ribonucleotide reductase, barrel domain Intein_splicing PF14890.6 gi|14521806|ref|NP_127282.1| - 2.7e-63 211.9 0.0 1e-28 99.9 0.0 4.7 4 2 0 4 4 4 3 Intein splicing domain LAGLIDADG_3 PF14528.6 gi|14521806|ref|NP_127282.1| - 2.9e-61 203.8 11.6 3.3e-20 72.2 0.5 6.0 5 0 0 5 5 5 5 LAGLIDADG-like domain Stirrup PF09061.6 gi|14521806|ref|NP_127282.1| - 8.1e-43 144.5 0.4 2.7e-42 142.8 0.4 2.0 1 0 0 1 1 1 1 Stirrup Ribonuc_red_lgN PF00317.21 gi|14521806|ref|NP_127282.1| - 1.6e-28 98.5 0.1 8.2e-28 96.2 0.1 2.4 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|14521806|ref|NP_127282.1| - 3e-21 75.8 1.3 1.4e-20 73.6 1.3 2.3 1 0 0 1 1 1 1 ATP cone domain Hom_end PF05204.14 gi|14521806|ref|NP_127282.1| - 3.5e-13 49.7 0.0 1.3e-05 25.4 0.0 5.3 5 0 0 5 5 5 2 Homing endonuclease LAGLIDADG_WhiA PF14527.6 gi|14521806|ref|NP_127282.1| - 7.9e-09 35.5 17.5 0.0017 18.4 0.4 6.9 7 0 0 7 7 7 3 WhiA LAGLIDADG-like domain Endonuc_subdom PF09062.10 gi|14521806|ref|NP_127282.1| - 1.3e-07 32.3 7.3 2.1e-06 28.5 0.1 4.3 4 0 0 4 4 3 1 PI-PfuI Endonuclease subdomain PT-HINT PF07591.11 gi|14521806|ref|NP_127282.1| - 0.00018 21.8 4.0 0.036 14.3 0.3 5.4 6 0 0 6 6 6 1 Pretoxin HINT domain Hint_2 PF13403.6 gi|14521806|ref|NP_127282.1| - 0.00021 21.6 0.6 1 9.6 0.0 4.2 4 0 0 4 4 4 1 Hint domain Gln-synt_C PF00120.24 gi|14521807|ref|NP_127283.1| - 1.1e-129 432.4 0.0 1.3e-129 432.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|14521807|ref|NP_127283.1| - 1.4e-22 79.2 0.0 2.2e-22 78.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|14521807|ref|NP_127283.1| - 0.0054 16.6 0.0 0.015 15.1 0.0 1.8 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain DUF61 PF01886.16 gi|14521808|ref|NP_127284.1| - 1.4e-33 115.6 4.6 1.6e-33 115.5 4.6 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 Wzt_C PF14524.6 gi|14521809|ref|NP_127285.1| - 0.00078 19.5 0.1 0.25 11.4 0.0 2.6 1 1 1 2 2 2 2 Wzt C-terminal domain CD34_antigen PF06365.12 gi|14521809|ref|NP_127285.1| - 0.0054 16.3 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 CD34/Podocalyxin family Herpes_gE PF02480.16 gi|14521809|ref|NP_127285.1| - 0.0079 15.0 0.1 0.028 13.2 0.0 1.8 2 0 0 2 2 2 1 Alphaherpesvirus glycoprotein E TMEM154 PF15102.6 gi|14521809|ref|NP_127285.1| - 0.019 14.8 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 TMEM154 protein family Plasmodium_Vir PF05795.11 gi|14521809|ref|NP_127285.1| - 0.024 14.1 0.7 0.042 13.3 0.7 1.3 1 0 0 1 1 1 0 Plasmodium vivax Vir protein DPCD PF14913.6 gi|14521809|ref|NP_127285.1| - 0.037 13.4 0.0 0.068 12.5 0.0 1.3 1 0 0 1 1 1 0 DPCD protein family S1FA PF04689.13 gi|14521809|ref|NP_127285.1| - 0.055 13.6 0.0 0.17 12.0 0.0 1.8 1 0 0 1 1 1 0 DNA binding protein S1FA FAD_binding_3 PF01494.19 gi|14521810|ref|NP_127286.1| - 2.7e-17 63.1 0.2 3.6e-14 52.8 0.0 2.4 1 1 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|14521810|ref|NP_127286.1| - 0.0002 21.1 3.5 0.22 11.1 0.0 2.4 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|14521810|ref|NP_127286.1| - 0.0013 18.9 2.1 0.014 15.6 0.6 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|14521810|ref|NP_127286.1| - 0.0025 17.0 0.2 0.95 8.4 0.4 2.6 2 1 0 2 2 2 2 Lycopene cyclase protein Thi4 PF01946.17 gi|14521810|ref|NP_127286.1| - 0.0056 15.9 2.3 0.025 13.8 0.5 2.6 3 1 0 3 3 3 1 Thi4 family Trp_halogenase PF04820.14 gi|14521810|ref|NP_127286.1| - 0.01 14.8 3.6 3.4 6.4 0.0 3.0 2 1 1 3 3 3 2 Tryptophan halogenase DUF1471 PF07338.13 gi|14521810|ref|NP_127286.1| - 0.032 14.2 0.1 0.09 12.8 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1471) Pyr_redox_2 PF07992.14 gi|14521810|ref|NP_127286.1| - 0.054 12.7 0.1 0.13 11.5 0.1 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF2262 PF10020.9 gi|14521810|ref|NP_127286.1| - 0.099 13.0 0.2 0.2 12.0 0.2 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) DUF1810 PF08837.11 gi|14521810|ref|NP_127286.1| - 0.14 12.0 0.1 5 6.9 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1810) ASCH PF04266.14 gi|14521811|ref|NP_127287.1| - 2.7e-15 56.9 1.7 3.2e-15 56.6 1.7 1.0 1 0 0 1 1 1 1 ASCH domain S4_2 PF13275.6 gi|14521811|ref|NP_127287.1| - 0.00038 20.2 0.6 0.00094 19.0 0.5 1.7 1 1 0 1 1 1 1 S4 domain Gti1_Pac2 PF09729.9 gi|14521811|ref|NP_127287.1| - 0.071 13.2 0.7 0.099 12.7 0.1 1.5 2 0 0 2 2 2 0 Gti1/Pac2 family DUF521 PF04412.13 gi|14521812|ref|NP_127288.1| - 1.3e-147 491.8 0.0 1.5e-147 491.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) QRPTase_C PF01729.19 gi|14521812|ref|NP_127288.1| - 0.064 13.0 0.5 0.47 10.2 0.2 2.2 2 1 1 3 3 3 0 Quinolinate phosphoribosyl transferase, C-terminal domain DUF126 PF01989.16 gi|14521813|ref|NP_127289.1| - 4e-36 122.7 1.0 5.3e-36 122.3 0.4 1.5 2 0 0 2 2 2 1 Aconitase X swivel domain Peptidase_M50 PF02163.22 gi|14521814|ref|NP_127290.1| - 1.9e-10 40.4 7.5 1.7e-06 27.5 0.1 2.5 1 1 1 2 2 2 2 Peptidase family M50 Zn-ribbon_8 PF09723.10 gi|14521814|ref|NP_127290.1| - 0.0081 16.3 0.3 0.014 15.5 0.3 1.3 1 0 0 1 1 1 1 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|14521814|ref|NP_127290.1| - 0.84 9.4 2.1 4.7 7.0 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain Cas_Cas6 PF01881.16 gi|14521815|ref|NP_127291.1| - 9e-31 107.4 1.7 9e-31 107.4 1.7 1.9 2 0 0 2 2 2 1 CRISPR associated protein Cas6 Glycos_transf_4 PF00953.21 gi|14521816|ref|NP_127292.1| - 4.7e-31 107.9 17.0 9.4e-31 106.9 17.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 4 HD_3 PF13023.6 gi|14521817|ref|NP_127293.1| - 5.4e-27 94.7 0.0 8.8e-27 94.0 0.0 1.4 1 1 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|14521817|ref|NP_127293.1| - 5.4e-17 62.1 0.7 3.5e-16 59.5 0.7 1.9 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme HD PF01966.22 gi|14521817|ref|NP_127293.1| - 2e-10 41.0 0.5 6.3e-10 39.3 0.5 1.8 1 1 0 1 1 1 1 HD domain HDOD PF08668.12 gi|14521817|ref|NP_127293.1| - 0.0028 17.2 0.0 0.0054 16.2 0.0 1.5 1 0 0 1 1 1 1 HDOD domain Com_YlbF PF06133.11 gi|14521817|ref|NP_127293.1| - 0.015 15.9 1.6 0.025 15.2 1.6 1.5 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA 4HB_MCP_1 PF12729.7 gi|14521817|ref|NP_127293.1| - 0.16 11.5 3.8 0.2 11.2 0.1 2.4 1 1 2 3 3 3 0 Four helix bundle sensory module for signal transduction tRNA_anti-like PF12869.7 gi|14521818|ref|NP_127294.1| - 0.081 12.5 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA_anti-like MMR_HSR1 PF01926.23 gi|14521819|ref|NP_127295.1| - 3.4e-24 85.1 0.3 5e-24 84.6 0.3 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|14521819|ref|NP_127295.1| - 1.8e-13 50.3 1.0 3e-13 49.6 1.0 1.3 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|14521819|ref|NP_127295.1| - 5.1e-11 42.5 1.4 1.6e-07 31.1 0.0 2.5 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|14521819|ref|NP_127295.1| - 4.6e-09 36.6 0.5 4.8e-05 23.5 0.6 2.2 1 1 1 2 2 2 2 Dynamin family RsgA_GTPase PF03193.16 gi|14521819|ref|NP_127295.1| - 4e-08 33.3 1.5 0.0049 16.8 0.1 2.6 2 1 1 3 3 3 2 RsgA GTPase cobW PF02492.19 gi|14521819|ref|NP_127295.1| - 2.9e-07 30.3 0.9 1.1e-06 28.3 0.1 1.9 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|14521819|ref|NP_127295.1| - 3.3e-06 26.9 1.3 0.00078 19.2 0.2 2.3 1 1 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 gi|14521819|ref|NP_127295.1| - 5.7e-06 26.5 0.6 0.0023 18.1 0.1 2.3 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 gi|14521819|ref|NP_127295.1| - 1.5e-05 24.6 1.7 0.081 12.4 0.1 2.2 2 0 0 2 2 2 2 ADP-ribosylation factor family GBP PF02263.19 gi|14521819|ref|NP_127295.1| - 8.4e-05 22.0 0.0 0.00013 21.3 0.0 1.3 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain MMR_HSR1_Xtn PF16897.5 gi|14521819|ref|NP_127295.1| - 0.00036 20.5 0.5 0.00073 19.5 0.5 1.5 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Septin PF00735.18 gi|14521819|ref|NP_127295.1| - 0.00093 18.6 4.9 0.18 11.1 4.9 2.1 1 1 0 1 1 1 1 Septin Ras PF00071.22 gi|14521819|ref|NP_127295.1| - 0.001 18.7 0.7 0.012 15.3 0.7 2.2 1 1 0 1 1 1 1 Ras family AAA_28 PF13521.6 gi|14521819|ref|NP_127295.1| - 0.023 15.0 0.3 0.046 14.0 0.3 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|14521819|ref|NP_127295.1| - 0.036 13.9 0.4 0.74 9.5 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AIG1 PF04548.16 gi|14521819|ref|NP_127295.1| - 0.037 13.4 0.5 0.089 12.1 0.4 1.6 1 1 0 1 1 1 0 AIG1 family NOG1 PF06858.14 gi|14521819|ref|NP_127295.1| - 0.056 13.2 1.9 0.097 12.5 0.4 2.2 2 1 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) AAA_29 PF13555.6 gi|14521819|ref|NP_127295.1| - 0.076 12.8 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|14521819|ref|NP_127295.1| - 0.08 13.5 1.2 0.1 13.1 1.2 1.6 1 1 0 1 1 1 0 ABC transporter IIGP PF05049.13 gi|14521819|ref|NP_127295.1| - 0.13 11.3 1.7 0.15 11.1 0.3 1.7 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) Gtr1_RagA PF04670.12 gi|14521819|ref|NP_127295.1| - 0.14 11.5 2.7 0.064 12.6 0.5 1.5 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region CarS-like PF01864.17 gi|14521820|ref|NP_127296.1| - 6.1e-58 195.6 1.0 7.2e-58 195.4 1.0 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|14521820|ref|NP_127296.1| - 6.6e-09 35.9 2.4 6.6e-09 35.9 2.4 2.0 2 0 0 2 2 2 1 Cytidylyltransferase family tRNA_anti-codon PF01336.25 gi|14521821|ref|NP_127297.1| - 4.7e-10 39.3 1.0 1.3e-09 37.9 0.5 2.1 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain DnaJ_CXXCXGXG PF00684.19 gi|14521821|ref|NP_127297.1| - 5.5e-09 36.3 11.9 0.00048 20.4 0.8 2.5 2 0 0 2 2 2 2 DnaJ central domain S1 PF00575.23 gi|14521821|ref|NP_127297.1| - 8.2e-09 35.7 1.3 8.2e-09 35.7 1.3 2.3 2 0 0 2 2 1 1 S1 RNA binding domain DHH PF01368.20 gi|14521821|ref|NP_127297.1| - 2.5e-05 24.5 1.2 0.00011 22.4 0.1 2.5 3 0 0 3 3 3 1 DHH family TackOD1 PF18551.1 gi|14521821|ref|NP_127297.1| - 0.00099 18.8 0.3 0.00099 18.8 0.3 2.2 1 1 1 2 2 2 1 Thaumarchaeal output domain 1 tRNA_anti_2 PF13742.6 gi|14521821|ref|NP_127297.1| - 0.0021 18.2 0.0 0.0052 17.0 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DHHA1 PF02272.19 gi|14521821|ref|NP_127297.1| - 0.0094 16.4 0.0 0.034 14.6 0.0 2.0 1 0 0 1 1 1 1 DHHA1 domain Anti-TRAP PF15777.5 gi|14521821|ref|NP_127297.1| - 0.0095 15.9 25.7 0.017 15.0 2.3 4.1 2 1 1 3 3 3 2 Tryptophan RNA-binding attenuator protein inhibitory protein RMI2 PF16100.5 gi|14521821|ref|NP_127297.1| - 0.024 14.4 0.0 0.056 13.3 0.0 1.5 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 Cytochrom_c3_2 PF14537.6 gi|14521821|ref|NP_127297.1| - 0.029 14.8 2.7 0.035 14.5 1.6 1.7 1 1 0 1 1 1 0 Cytochrome c3 SIS PF01380.22 gi|14521821|ref|NP_127297.1| - 0.042 13.7 0.0 0.079 12.8 0.0 1.4 1 0 0 1 1 1 0 SIS domain Rep_fac-A_3 PF08661.11 gi|14521821|ref|NP_127297.1| - 0.043 14.2 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 Replication factor A protein 3 Cytochrome_C7 PF14522.6 gi|14521821|ref|NP_127297.1| - 1.4 9.0 6.8 46 4.1 6.8 2.3 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c zinc-ribbons_6 PF07191.12 gi|14521821|ref|NP_127297.1| - 1.6 8.7 10.3 14 5.7 4.3 3.0 2 1 1 3 3 3 0 zinc-ribbons zinc_ribbon_10 PF10058.9 gi|14521821|ref|NP_127297.1| - 2.9 7.7 5.1 1.4 8.7 1.6 2.3 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 gi|14521821|ref|NP_127297.1| - 9.2 6.4 15.5 26 5.0 7.7 3.0 1 1 0 2 2 2 0 Double zinc ribbon UPF0020 PF01170.18 gi|14521822|ref|NP_127298.1| - 6.5e-29 101.0 0.0 6.8e-28 97.7 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|14521822|ref|NP_127298.1| - 1.7e-16 60.6 0.5 3.4e-16 59.7 0.5 1.5 1 0 0 1 1 1 1 THUMP domain Methyltransf_31 PF13847.6 gi|14521822|ref|NP_127298.1| - 4.4e-08 33.1 0.0 7.6e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|14521822|ref|NP_127298.1| - 2.7e-07 30.3 0.0 4.1e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_Mtase PF02384.16 gi|14521822|ref|NP_127298.1| - 1.1e-06 28.2 0.0 1.7e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_25 PF13649.6 gi|14521822|ref|NP_127298.1| - 3e-06 27.8 0.0 6.1e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|14521822|ref|NP_127298.1| - 5.1e-06 26.4 0.0 0.00018 21.3 0.0 2.1 2 0 0 2 2 2 1 DNA methylase Cons_hypoth95 PF03602.15 gi|14521822|ref|NP_127298.1| - 3.4e-05 23.6 0.0 6.3e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 AviRa PF11599.8 gi|14521822|ref|NP_127298.1| - 0.007 15.8 0.0 1.8 8.0 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa Methyltransf_11 PF08241.12 gi|14521822|ref|NP_127298.1| - 0.01 16.5 0.0 0.018 15.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521822|ref|NP_127298.1| - 0.019 14.8 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MethyltransfD12 PF02086.15 gi|14521822|ref|NP_127298.1| - 0.13 11.9 0.0 0.25 11.0 0.0 1.4 1 1 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase Peptidase_M73 PF12389.8 gi|14521823|ref|NP_127299.1| - 5.7e-07 29.6 0.1 7.2e-07 29.2 0.1 1.1 1 0 0 1 1 1 1 Camelysin metallo-endopeptidase MS_channel PF00924.18 gi|14521824|ref|NP_127300.1| - 4.4e-58 196.2 0.3 6.2e-58 195.7 0.3 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.12 gi|14521824|ref|NP_127300.1| - 4.9 7.2 11.7 4.4 7.4 0.9 3.4 3 1 0 3 3 3 0 Conserved TM helix DUF432 PF04254.13 gi|14521825|ref|NP_127301.1| - 1.8e-23 83.1 0.0 3e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF432) PQQ_2 PF13360.6 gi|14521827|ref|NP_127303.1| - 3.4e-09 36.6 1.1 0.0001 21.9 0.3 3.5 2 1 2 4 4 4 3 PQQ-like domain PQQ_3 PF13570.6 gi|14521827|ref|NP_127303.1| - 2.8e-05 24.5 18.5 0.0092 16.4 0.0 6.6 7 0 0 7 7 7 2 PQQ-like domain PQQ PF01011.21 gi|14521827|ref|NP_127303.1| - 0.12 12.3 6.7 6.1 7.0 0.0 5.1 5 0 0 5 5 5 0 PQQ enzyme repeat Vps16_N PF04841.13 gi|14521827|ref|NP_127303.1| - 0.16 10.7 0.1 0.24 10.1 0.1 1.2 1 0 0 1 1 1 0 Vps16, N-terminal region DUF58 PF01882.18 gi|14521829|ref|NP_127305.1| - 1.9e-24 85.7 0.0 3.3e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 bMG10 PF17973.1 gi|14521829|ref|NP_127305.1| - 5.6e-05 23.3 1.2 0.22 11.7 0.1 2.4 1 1 1 2 2 2 2 Bacterial Alpha-2-macroglobulin MG10 domain BatD PF13584.6 gi|14521829|ref|NP_127305.1| - 0.0021 17.0 0.0 0.019 13.8 0.0 2.0 1 1 0 1 1 1 1 Oxygen tolerance DUF4916 PF16262.5 gi|14521829|ref|NP_127305.1| - 0.093 12.2 0.0 0.29 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4916) AAA_3 PF07726.11 gi|14521830|ref|NP_127306.1| - 4.5e-64 214.2 0.0 6.5e-64 213.7 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|14521830|ref|NP_127306.1| - 3.8e-18 65.1 0.1 6.7e-18 64.3 0.1 1.4 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|14521830|ref|NP_127306.1| - 5.7e-13 49.0 0.0 1.3e-12 47.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|14521830|ref|NP_127306.1| - 1.6e-06 28.6 0.0 2.6e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|14521830|ref|NP_127306.1| - 1.2e-05 25.1 0.0 0.00011 22.0 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|14521830|ref|NP_127306.1| - 6.7e-05 22.7 0.0 0.0008 19.2 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 gi|14521830|ref|NP_127306.1| - 8.3e-05 22.1 0.0 0.11 11.9 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM PF00493.23 gi|14521830|ref|NP_127306.1| - 0.0054 15.9 0.0 0.012 14.7 0.0 1.7 1 1 0 1 1 1 1 MCM P-loop domain AAA_lid_8 PF17868.1 gi|14521830|ref|NP_127306.1| - 0.12 12.3 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA lid domain Transglut_core PF01841.19 gi|14521832|ref|NP_127308.1| - 3.3e-29 101.6 0.0 6.3e-29 100.7 0.0 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily Big_3_5 PF16640.5 gi|14521832|ref|NP_127308.1| - 6.4e-09 35.9 0.1 0.00028 21.0 0.0 4.7 4 1 1 5 5 5 1 Bacterial Ig-like domain (group 3) Big_1 PF02369.16 gi|14521832|ref|NP_127308.1| - 3.8e-06 26.8 4.1 0.0006 19.8 0.0 4.5 4 1 0 4 4 4 1 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 gi|14521832|ref|NP_127308.1| - 2.9e-05 24.3 0.3 6.7 7.1 0.0 3.9 3 0 0 3 3 3 2 Invasin, domain 3 CarboxypepD_reg PF13620.6 gi|14521832|ref|NP_127308.1| - 8.4e-05 22.8 4.0 1.3 9.3 0.0 5.1 5 0 0 5 5 5 2 Carboxypeptidase regulatory-like domain bMG3 PF11974.8 gi|14521832|ref|NP_127308.1| - 0.0015 18.5 0.0 0.018 15.1 0.0 2.5 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain Big_2 PF02368.18 gi|14521832|ref|NP_127308.1| - 0.011 15.7 4.7 0.35 10.8 0.6 3.5 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 2) Transglut_core3 PF13471.6 gi|14521832|ref|NP_127308.1| - 0.026 14.4 0.0 0.05 13.5 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily DUF4198 PF10670.9 gi|14521832|ref|NP_127308.1| - 0.049 14.0 0.0 0.59 10.5 0.0 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4198) Ribophorin_II PF05817.14 gi|14521832|ref|NP_127308.1| - 0.11 11.0 0.3 0.19 10.2 0.3 1.3 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II Big_3 PF07523.12 gi|14521832|ref|NP_127308.1| - 1.6 9.1 5.0 2.7 8.4 0.6 3.7 4 0 0 4 4 4 0 Bacterial Ig-like domain (group 3) VIT1 PF01988.19 gi|14521833|ref|NP_127309.1| - 4.9e-44 150.8 3.1 7.8e-44 150.1 3.1 1.3 1 0 0 1 1 1 1 VIT family Rubrerythrin PF02915.17 gi|14521833|ref|NP_127309.1| - 5.1e-09 36.6 5.0 9.6e-09 35.8 5.0 1.4 1 0 0 1 1 1 1 Rubrerythrin DUF1297 PF06973.12 gi|14521834|ref|NP_127310.1| - 8.8e-82 273.2 0.0 1.2e-81 272.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|14521834|ref|NP_127310.1| - 4.7e-44 149.3 0.0 7.1e-44 148.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GARS_A PF01071.19 gi|14521835|ref|NP_127311.1| - 2e-59 200.6 0.0 3.3e-59 200.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|14521835|ref|NP_127311.1| - 2e-25 89.4 0.2 1.9e-24 86.2 0.1 2.2 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|14521835|ref|NP_127311.1| - 2e-13 50.4 2.9 5.7e-13 49.0 0.1 3.0 3 1 0 3 3 3 1 Phosphoribosylglycinamide synthetase, C domain Dala_Dala_lig_C PF07478.13 gi|14521835|ref|NP_127311.1| - 5e-05 22.9 0.0 9.7e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_4 PF13535.6 gi|14521835|ref|NP_127311.1| - 5.9e-05 22.7 0.2 0.12 12.0 0.5 3.0 2 1 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|14521835|ref|NP_127311.1| - 0.00014 21.9 0.0 0.00035 20.7 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|14521835|ref|NP_127311.1| - 0.00026 20.6 0.0 0.0014 18.1 0.0 2.1 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|14521835|ref|NP_127311.1| - 0.0017 18.0 0.1 0.0038 16.8 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|14521835|ref|NP_127311.1| - 0.0031 16.8 0.0 0.042 13.1 0.0 2.1 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_2 PF08442.10 gi|14521835|ref|NP_127311.1| - 0.023 14.3 0.2 0.13 11.8 0.0 2.2 2 0 0 2 2 2 0 ATP-grasp domain GSH-S_ATP PF02955.16 gi|14521835|ref|NP_127311.1| - 0.026 13.9 0.0 0.052 13.0 0.0 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain GCH_III PF05165.12 gi|14521835|ref|NP_127311.1| - 0.038 13.3 0.1 0.12 11.7 0.1 1.8 2 0 0 2 2 2 0 GTP cyclohydrolase III AIRC PF00731.20 gi|14521838|ref|NP_127314.1| - 6.8e-71 236.6 0.2 7.9e-71 236.4 0.2 1.0 1 0 0 1 1 1 1 AIR carboxylase PrpR_N PF06506.11 gi|14521838|ref|NP_127314.1| - 0.038 13.5 0.1 0.085 12.4 0.1 1.7 1 1 1 2 2 2 0 Propionate catabolism activator Fe-ADH PF00465.19 gi|14521838|ref|NP_127314.1| - 0.08 11.7 0.3 0.14 10.9 0.1 1.5 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase Fes1 PF08609.10 gi|14521838|ref|NP_127314.1| - 0.13 13.2 0.3 0.56 11.1 0.0 1.9 2 0 0 2 2 2 0 Nucleotide exchange factor Fes1 ATP-grasp PF02222.22 gi|14521839|ref|NP_127315.1| - 5.8e-57 192.0 0.0 1.2e-56 191.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|14521839|ref|NP_127315.1| - 1.3e-08 34.6 0.0 1.9e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|14521839|ref|NP_127315.1| - 1.5e-08 34.5 0.0 2.2e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus 2-Hacid_dh_C PF02826.19 gi|14521839|ref|NP_127315.1| - 0.00031 20.1 0.0 0.00066 19.1 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GARS_A PF01071.19 gi|14521839|ref|NP_127315.1| - 0.00042 20.2 0.1 0.00083 19.2 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Epimerase PF01370.21 gi|14521839|ref|NP_127315.1| - 0.0012 18.3 0.0 0.0021 17.6 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family LAL_C2 PF18603.1 gi|14521839|ref|NP_127315.1| - 0.02 15.0 0.1 0.043 14.0 0.1 1.6 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 PurK_C PF17769.1 gi|14521839|ref|NP_127315.1| - 0.041 13.6 0.0 0.082 12.6 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|14521839|ref|NP_127315.1| - 0.049 13.7 0.0 0.097 12.7 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain SpoIIM PF01944.17 gi|14521842|ref|NP_127318.1| - 1.9e-25 89.8 6.7 2.1e-25 89.6 6.7 1.0 1 0 0 1 1 1 1 Stage II sporulation protein M Peptidase_A22B PF04258.13 gi|14521843|ref|NP_127319.1| - 0.0015 18.1 0.7 0.0023 17.5 0.7 1.3 1 1 0 1 1 1 1 Signal peptide peptidase Frag1 PF10277.9 gi|14521843|ref|NP_127319.1| - 0.0028 17.2 1.8 0.005 16.4 1.8 1.4 1 1 0 1 1 1 1 Frag1/DRAM/Sfk1 family DUF3985 PF13153.6 gi|14521843|ref|NP_127319.1| - 0.0041 17.1 0.9 0.0041 17.1 0.9 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF3985) DUF1616 PF07760.11 gi|14521843|ref|NP_127319.1| - 0.0059 16.0 5.5 0.19 11.1 5.5 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1616) DUF3995 PF13160.6 gi|14521843|ref|NP_127319.1| - 0.082 13.3 3.2 0.9 9.9 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3995) Pet100 PF09803.9 gi|14521843|ref|NP_127319.1| - 0.14 12.7 0.1 14 6.3 0.0 2.8 2 1 0 2 2 2 0 Pet100 DUF4271 PF14093.6 gi|14521843|ref|NP_127319.1| - 0.15 12.0 6.0 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) PGG PF13962.6 gi|14521843|ref|NP_127319.1| - 0.15 11.9 0.1 0.15 11.9 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function DUF4131 PF13567.6 gi|14521843|ref|NP_127319.1| - 2.2 7.9 7.6 0.79 9.3 1.9 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4131) PrgI PF12666.7 gi|14521843|ref|NP_127319.1| - 6.5 7.5 9.4 29 5.4 0.2 2.5 2 1 0 2 2 2 0 PrgI family protein DUF2244 PF10003.9 gi|14521843|ref|NP_127319.1| - 8.7 6.0 12.1 2.1 8.0 4.4 2.6 2 2 0 2 2 2 0 Integral membrane protein (DUF2244) DUF2433 PF10360.9 gi|14521844|ref|NP_127320.1| - 0.016 15.3 0.3 0.016 15.3 0.3 3.2 3 1 1 4 4 4 0 Protein of unknown function (DUF2433) DUF4175 PF13779.6 gi|14521844|ref|NP_127320.1| - 0.16 9.9 12.4 0.0085 14.1 4.8 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4175) DUF5377 PF17347.2 gi|14521844|ref|NP_127320.1| - 0.19 12.1 0.8 7.3 7.0 0.1 3.0 2 0 0 2 2 2 0 Family of unknown function (DUF5377) TPR_12 PF13424.6 gi|14521844|ref|NP_127320.1| - 0.41 11.0 25.9 1.7 9.0 0.5 7.0 5 1 1 6 6 6 0 Tetratricopeptide repeat Neuraminidase PF18413.1 gi|14521844|ref|NP_127320.1| - 0.74 9.4 5.5 1.5 8.5 0.6 2.7 2 0 0 2 2 2 0 Neuraminidase-like domain TPR_1 PF00515.28 gi|14521844|ref|NP_127320.1| - 1.3 9.0 33.8 0.78 9.7 0.7 7.5 7 0 0 7 7 7 0 Tetratricopeptide repeat DUF4298 PF14131.6 gi|14521844|ref|NP_127320.1| - 1.3 9.0 0.0 1.3 9.0 0.0 6.7 6 2 2 8 8 8 0 Domain of unknown function (DUF4298) ZapB PF06005.12 gi|14521845|ref|NP_127321.1| - 5e-05 23.7 6.7 5e-05 23.7 6.7 2.4 2 0 0 2 2 2 1 Cell division protein ZapB Cep57_CLD_2 PF14197.6 gi|14521845|ref|NP_127321.1| - 0.0034 17.4 5.9 0.0034 17.4 5.9 2.4 2 0 0 2 2 2 1 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 gi|14521845|ref|NP_127321.1| - 0.0079 16.6 10.4 0.8 10.1 0.4 2.4 2 0 0 2 2 2 2 Uso1 / p115 like vesicle tethering protein, C terminal region Leu_zip PF15294.6 gi|14521845|ref|NP_127321.1| - 0.02 14.4 19.5 0.035 13.6 11.1 2.3 1 1 1 2 2 2 0 Leucine zipper Seryl_tRNA_N PF02403.22 gi|14521845|ref|NP_127321.1| - 0.047 13.9 19.2 1.4 9.2 1.2 2.9 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF711 PF05167.12 gi|14521845|ref|NP_127321.1| - 0.21 10.4 0.8 0.38 9.6 0.8 1.3 1 0 0 1 1 1 0 Uncharacterised ACR (DUF711) TMF_TATA_bd PF12325.8 gi|14521845|ref|NP_127321.1| - 0.29 11.4 17.8 1.3 9.3 9.5 2.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding TLE_N PF03920.15 gi|14521845|ref|NP_127321.1| - 0.36 10.9 4.9 0.16 12.0 1.6 2.1 2 0 0 2 2 2 0 Groucho/TLE N-terminal Q-rich domain DUF2205 PF10224.9 gi|14521845|ref|NP_127321.1| - 0.76 9.8 5.3 2.5 8.2 3.1 2.9 2 1 1 3 3 2 0 Short coiled-coil protein FlaC_arch PF05377.11 gi|14521845|ref|NP_127321.1| - 0.85 10.1 21.7 0.94 9.9 1.0 5.3 2 2 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF3450 PF11932.8 gi|14521845|ref|NP_127321.1| - 0.91 8.8 9.8 0.98 8.7 7.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) KASH_CCD PF14662.6 gi|14521845|ref|NP_127321.1| - 1 9.1 20.2 4.9 6.9 18.6 2.4 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH NRBF2 PF08961.10 gi|14521845|ref|NP_127321.1| - 1.1 8.9 5.1 2.1 7.9 5.1 1.4 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator TPR_MLP1_2 PF07926.12 gi|14521845|ref|NP_127321.1| - 1.3 9.1 15.7 0.77 9.8 7.6 3.2 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein DivIC PF04977.15 gi|14521845|ref|NP_127321.1| - 1.4 8.7 14.5 0.45 10.3 8.2 3.3 2 2 1 3 3 3 0 Septum formation initiator CENP-H PF05837.12 gi|14521845|ref|NP_127321.1| - 1.5 9.2 14.5 1.8 9.0 6.9 2.6 1 1 0 2 2 2 0 Centromere protein H (CENP-H) CENP-F_leu_zip PF10473.9 gi|14521845|ref|NP_127321.1| - 1.7 8.7 19.1 9.7 6.2 0.5 2.7 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GIT_CC PF16559.5 gi|14521845|ref|NP_127321.1| - 1.8 8.5 6.9 9.1 6.2 0.8 3.1 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor ATG16 PF08614.11 gi|14521845|ref|NP_127321.1| - 1.9 8.7 12.8 1.8 8.7 8.7 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) YabA PF06156.13 gi|14521845|ref|NP_127321.1| - 2.8 8.6 21.1 4.6 7.9 9.8 3.7 1 1 1 3 3 3 0 Initiation control protein YabA Baculo_PEP_C PF04513.12 gi|14521845|ref|NP_127321.1| - 3.9 7.5 13.0 6 6.9 10.1 2.5 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BRE1 PF08647.11 gi|14521845|ref|NP_127321.1| - 3.9 7.6 16.8 0.35 11.0 6.7 2.8 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Nup54 PF13874.6 gi|14521845|ref|NP_127321.1| - 4.1 7.5 9.9 1.8 8.6 5.9 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 KxDL PF10241.9 gi|14521845|ref|NP_127321.1| - 4.1 7.7 10.6 16 5.9 0.3 2.9 2 0 0 2 2 2 0 Uncharacterized conserved protein Atg14 PF10186.9 gi|14521845|ref|NP_127321.1| - 4.5 6.3 12.3 11 5.0 11.8 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HALZ PF02183.18 gi|14521845|ref|NP_127321.1| - 4.6 7.5 17.4 0.12 12.6 5.1 4.1 3 1 2 5 5 4 0 Homeobox associated leucine zipper bZIP_2 PF07716.15 gi|14521845|ref|NP_127321.1| - 5.8 7.1 18.5 2.9 8.0 3.2 3.3 2 1 1 3 3 3 0 Basic region leucine zipper Occludin_ELL PF07303.13 gi|14521845|ref|NP_127321.1| - 6.9 7.5 17.7 7.6 7.3 8.2 3.3 2 2 0 2 2 2 0 Occludin homology domain APG6_N PF17675.1 gi|14521845|ref|NP_127321.1| - 7.2 7.2 19.5 0.18 12.4 8.9 2.9 2 1 0 3 3 3 0 Apg6 coiled-coil region bZIP_1 PF00170.21 gi|14521845|ref|NP_127321.1| - 7.5 6.7 22.2 2.8 8.1 10.5 4.3 3 1 1 4 4 4 0 bZIP transcription factor DUF1241 PF06840.11 gi|14521846|ref|NP_127322.1| - 0.0034 17.0 0.4 0.24 11.0 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF1241) Peptidase_M13_N PF05649.13 gi|14521847|ref|NP_127323.1| - 0.023 14.4 0.1 0.038 13.7 0.1 1.5 1 0 0 1 1 1 0 Peptidase family M13 BSD PF03909.17 gi|14521847|ref|NP_127323.1| - 0.053 13.5 0.1 15 5.6 0.0 2.5 2 0 0 2 2 2 0 BSD domain DUF3188 PF11384.8 gi|14521847|ref|NP_127323.1| - 0.055 13.2 0.4 1 9.1 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) HORMA PF02301.18 gi|14521847|ref|NP_127323.1| - 0.13 11.8 0.2 0.27 10.8 0.2 1.5 1 0 0 1 1 1 0 HORMA domain APG17 PF04108.12 gi|14521847|ref|NP_127323.1| - 0.29 10.2 2.2 0.25 10.4 0.6 1.6 2 0 0 2 2 2 0 Autophagy protein Apg17 Ribosomal_S6 PF01250.17 gi|14521847|ref|NP_127323.1| - 0.7 10.2 3.4 28 5.1 0.0 3.3 3 0 0 3 3 3 0 Ribosomal protein S6 Tubulin_2 PF13809.6 gi|14521848|ref|NP_127324.1| - 2.7e-15 56.4 0.4 2e-10 40.4 0.0 2.7 3 0 0 3 3 3 2 Tubulin like Tubulin PF00091.25 gi|14521848|ref|NP_127324.1| - 1.1e-08 35.5 2.4 1.8e-06 28.3 0.0 3.5 4 0 0 4 4 3 1 Tubulin/FtsZ family, GTPase domain DUF948 PF06103.11 gi|14521848|ref|NP_127324.1| - 0.025 14.8 4.1 19 5.6 0.0 5.4 5 0 0 5 5 5 0 Bacterial protein of unknown function (DUF948) DUF2779 PF11074.8 gi|14521848|ref|NP_127324.1| - 0.031 14.7 3.8 0.44 11.0 0.2 3.0 2 0 0 2 2 2 0 Domain of unknown function(DUF2779) HBM PF16591.5 gi|14521848|ref|NP_127324.1| - 0.11 11.8 5.3 0.27 10.6 1.3 2.9 3 0 0 3 3 3 0 Helical bimodular sensor domain PNK3P PF08645.11 gi|14521848|ref|NP_127324.1| - 0.15 11.8 6.4 0.32 10.7 0.1 3.6 3 1 1 4 4 4 0 Polynucleotide kinase 3 phosphatase Phasin PF05597.11 gi|14521848|ref|NP_127324.1| - 0.17 11.9 16.0 1.2 9.1 0.0 6.0 5 2 2 7 7 7 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF3800 PF12686.7 gi|14521848|ref|NP_127324.1| - 0.48 11.1 6.7 6.4e+02 1.0 5.9 4.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) DASH_Dad2 PF08654.10 gi|14521848|ref|NP_127324.1| - 0.53 10.7 3.3 1.8 9.0 0.1 3.2 3 0 0 3 3 2 0 DASH complex subunit Dad2 Fur_reg_FbpB PF13040.6 gi|14521848|ref|NP_127324.1| - 0.99 9.0 9.1 0.046 13.3 1.5 2.8 3 0 0 3 3 3 0 Fur-regulated basic protein B Baculo_PEP_C PF04513.12 gi|14521848|ref|NP_127324.1| - 1 9.4 17.5 0.078 13.0 0.3 5.3 5 2 1 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus His_kinase PF06580.13 gi|14521848|ref|NP_127324.1| - 1.4 9.3 5.3 2 8.8 0.2 3.7 3 0 0 3 3 3 0 Histidine kinase DASH_Dam1 PF08653.10 gi|14521848|ref|NP_127324.1| - 1.6 8.6 8.5 1.7 8.5 0.2 4.7 4 1 1 5 5 5 0 DASH complex subunit Dam1 Spc29 PF17082.5 gi|14521848|ref|NP_127324.1| - 9.6 6.0 12.4 6.5 6.5 0.3 3.4 2 1 0 3 3 3 0 Spindle Pole Component 29 FeoB_C PF07664.12 gi|14521849|ref|NP_127325.1| - 1.4 8.7 3.5 1.6 8.5 0.1 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus SNARE PF05739.19 gi|14521849|ref|NP_127325.1| - 1.6 8.8 0.0 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 SNARE domain AIRS_C PF02769.22 gi|14521850|ref|NP_127326.1| - 6.2e-25 88.2 0.0 1.4e-24 87.0 0.0 1.6 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|14521850|ref|NP_127326.1| - 5.9e-19 68.5 1.7 1e-18 67.8 1.7 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain tRNA-synt_1 PF00133.22 gi|14521851|ref|NP_127327.1| - 1.2e-145 486.2 0.8 1.5e-144 482.5 0.8 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|14521851|ref|NP_127327.1| - 1.7e-38 132.0 1.5 1.7e-38 132.0 1.5 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|14521851|ref|NP_127327.1| - 1.9e-26 92.8 6.6 2.4e-17 62.8 0.0 3.6 4 0 0 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|14521851|ref|NP_127327.1| - 5.3e-06 26.0 0.0 0.076 12.3 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|14521851|ref|NP_127327.1| - 1.4e-05 24.7 0.1 4.1e-05 23.2 0.1 1.8 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 zf-TFIIB PF13453.6 gi|14521851|ref|NP_127327.1| - 0.033 13.5 0.8 2.6 7.5 0.0 2.5 2 0 0 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|14521851|ref|NP_127327.1| - 0.034 13.9 0.5 1.6 8.5 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|14521851|ref|NP_127327.1| - 0.41 10.6 3.2 2.7 7.9 0.3 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Zn-ribbon_8 PF09723.10 gi|14521851|ref|NP_127327.1| - 0.46 10.6 1.7 6.9 6.9 0.4 2.5 2 0 0 2 2 2 0 Zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|14521851|ref|NP_127327.1| - 1.1 9.4 4.4 3.2 7.8 0.7 2.8 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain adh_short_C2 PF13561.6 gi|14521852|ref|NP_127328.1| - 9.6e-62 208.6 0.3 1.2e-61 208.3 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|14521852|ref|NP_127328.1| - 1.2e-60 204.3 0.4 1.6e-60 203.9 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|14521852|ref|NP_127328.1| - 1.1e-16 61.2 0.1 3e-16 59.8 0.1 1.6 1 1 1 2 2 2 1 KR domain Epimerase PF01370.21 gi|14521852|ref|NP_127328.1| - 3.2e-06 26.8 0.2 5e-06 26.2 0.2 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|14521852|ref|NP_127328.1| - 0.00036 20.5 0.1 0.00058 19.8 0.1 1.5 2 0 0 2 2 2 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|14521852|ref|NP_127328.1| - 0.00097 18.5 1.7 0.0026 17.1 0.2 2.4 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|14521852|ref|NP_127328.1| - 0.0051 17.1 0.2 0.0094 16.2 0.2 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 gi|14521852|ref|NP_127328.1| - 0.0094 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 gi|14521852|ref|NP_127328.1| - 0.019 14.3 0.1 0.046 13.0 0.1 1.8 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NmrA PF05368.13 gi|14521852|ref|NP_127328.1| - 0.022 14.3 0.1 0.036 13.6 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family Polysacc_synt_2 PF02719.15 gi|14521852|ref|NP_127328.1| - 0.023 13.8 0.3 0.035 13.3 0.3 1.4 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1776 PF08643.10 gi|14521852|ref|NP_127328.1| - 0.035 13.5 0.1 0.063 12.6 0.1 1.4 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Wax2_C PF12076.8 gi|14521852|ref|NP_127328.1| - 0.043 13.5 0.1 0.072 12.8 0.1 1.3 1 0 0 1 1 1 0 WAX2 C-terminal domain PALP PF00291.25 gi|14521852|ref|NP_127328.1| - 0.048 13.1 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme F420_oxidored PF03807.17 gi|14521852|ref|NP_127328.1| - 0.085 13.4 0.2 0.22 12.1 0.2 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent PEPCK_GTP PF00821.18 gi|14521853|ref|NP_127329.1| - 2.2e-109 365.6 0.0 2.8e-109 365.2 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PEPCK_N PF17297.2 gi|14521853|ref|NP_127329.1| - 5.9e-58 196.0 0.0 7.9e-58 195.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase N-terminal domain FeS_assembly_P PF01883.19 gi|14521854|ref|NP_127330.1| - 9.1e-23 80.2 1.5 7.8e-22 77.2 0.2 2.7 2 1 0 2 2 2 1 Iron-sulfur cluster assembly protein ACT_4 PF13291.6 gi|14521854|ref|NP_127330.1| - 0.48 11.0 3.1 2.5 8.8 0.7 2.7 2 1 0 2 2 2 0 ACT domain HMA PF00403.26 gi|14521854|ref|NP_127330.1| - 0.53 10.8 12.8 0.77 10.3 0.1 4.0 3 1 1 4 4 4 0 Heavy-metal-associated domain Peptidase_C1 PF00112.23 gi|14521855|ref|NP_127331.1| - 9.3e-07 29.1 2.2 8.3e-06 26.0 3.1 1.9 2 0 0 2 2 2 1 Papain family cysteine protease DUF756 PF05506.12 gi|14521855|ref|NP_127331.1| - 0.82 10.6 6.5 1.5 9.8 4.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF756) He_PIG PF05345.12 gi|14521855|ref|NP_127331.1| - 1.1 9.5 23.3 0.029 14.6 2.3 4.6 3 1 0 3 3 3 0 Putative Ig domain TPR_2 PF07719.17 gi|14521855|ref|NP_127331.1| - 2.9 8.2 5.3 3.5 8.0 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat LAGLIDADG_3 PF14528.6 gi|14521856|ref|NP_127332.1| - 1.8e-16 60.2 1.8 1.5e-10 41.3 0.3 2.4 2 0 0 2 2 2 2 LAGLIDADG-like domain LAGLIDADG_WhiA PF14527.6 gi|14521856|ref|NP_127332.1| - 6.1e-05 23.0 0.4 0.016 15.2 0.0 3.0 3 0 0 3 3 3 1 WhiA LAGLIDADG-like domain HTH_32 PF13565.6 gi|14521856|ref|NP_127332.1| - 0.011 16.3 0.1 0.019 15.6 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_33 PF13592.6 gi|14521856|ref|NP_127332.1| - 0.021 14.5 0.0 0.058 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix IMPDH PF00478.25 gi|14521857|ref|NP_127333.1| - 5.4e-147 489.3 9.0 6.2e-147 489.1 9.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 gi|14521857|ref|NP_127333.1| - 2.2e-30 104.9 8.5 6.7e-17 61.7 1.4 3.8 2 2 1 3 3 3 2 CBS domain NMO PF03060.15 gi|14521857|ref|NP_127333.1| - 3.5e-07 29.9 8.3 0.012 15.0 0.0 2.7 2 1 1 3 3 3 2 Nitronate monooxygenase FMN_dh PF01070.18 gi|14521857|ref|NP_127333.1| - 4.3e-06 26.0 12.2 1e-05 24.8 9.4 2.7 3 1 0 3 3 3 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|14521857|ref|NP_127333.1| - 1.8e-05 24.0 5.5 2.2e-05 23.8 4.4 1.6 2 0 0 2 2 2 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|14521857|ref|NP_127333.1| - 0.021 14.3 8.7 0.0067 15.9 5.0 2.1 2 1 0 2 2 2 0 Histidine biosynthesis protein NAD_binding_7 PF13241.6 gi|14521857|ref|NP_127333.1| - 0.13 12.7 1.0 26 5.3 0.1 3.0 3 0 0 3 3 3 0 Putative NAD(P)-binding ThiG PF05690.14 gi|14521857|ref|NP_127333.1| - 0.69 9.2 13.1 0.1 11.9 2.8 3.5 3 1 1 4 4 4 0 Thiazole biosynthesis protein ThiG Acylphosphatase PF00708.18 gi|14521859|ref|NP_127335.1| - 3.3e-29 101.1 0.0 3.7e-29 101.0 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase Metallophos_2 PF12850.7 gi|14521860|ref|NP_127336.1| - 3.2e-21 76.2 0.0 5.1e-21 75.6 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|14521860|ref|NP_127336.1| - 8.7e-20 72.1 0.1 2e-19 70.9 0.1 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|14521860|ref|NP_127336.1| - 1.3e-17 64.0 0.1 2.7e-12 46.6 0.0 2.4 2 1 1 3 3 3 2 Metallophosphoesterase, calcineurin superfamily F-box-like_2 PF13013.6 gi|14521861|ref|NP_127337.1| - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 F-box-like domain Pyr_redox_2 PF07992.14 gi|14521862|ref|NP_127338.1| - 1.4e-15 57.4 0.3 6.7e-06 25.5 0.0 3.1 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|14521862|ref|NP_127338.1| - 4.3e-09 36.4 0.3 1.8e-05 24.5 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase GIDA PF01134.22 gi|14521862|ref|NP_127338.1| - 1.6e-08 34.1 0.1 0.0018 17.5 0.0 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A HI0933_like PF03486.14 gi|14521862|ref|NP_127338.1| - 3.7e-08 32.5 0.0 3.4e-06 26.0 0.0 2.2 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|14521862|ref|NP_127338.1| - 6.8e-07 28.8 0.0 2.1e-06 27.2 0.0 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|14521862|ref|NP_127338.1| - 4.4e-06 26.1 0.6 5.3e-05 22.5 0.1 2.6 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 gi|14521862|ref|NP_127338.1| - 5.7e-06 26.5 0.0 6.6e-05 23.1 0.1 2.7 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|14521862|ref|NP_127338.1| - 0.00012 21.3 0.2 0.0002 20.6 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|14521862|ref|NP_127338.1| - 0.00015 21.2 0.0 0.0029 16.9 0.1 2.5 3 0 0 3 3 3 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|14521862|ref|NP_127338.1| - 0.00024 20.5 0.4 0.0012 18.2 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14521862|ref|NP_127338.1| - 0.0064 17.0 0.4 6.1 7.5 0.1 3.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|14521862|ref|NP_127338.1| - 0.0074 15.7 0.1 0.033 13.6 0.2 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|14521862|ref|NP_127338.1| - 0.012 15.6 0.1 0.023 14.7 0.1 1.4 1 0 0 1 1 1 0 FAD-NAD(P)-binding Na_H_Exchanger PF00999.21 gi|14521863|ref|NP_127339.1| - 5.9e-65 219.5 49.1 6.7e-65 219.3 49.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family ATP_bind_3 PF01171.20 gi|14521864|ref|NP_127340.1| - 6.3e-12 45.6 0.0 1.1e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 PP-loop family ThiI PF02568.14 gi|14521864|ref|NP_127340.1| - 3.7e-08 33.2 0.0 6.4e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|14521864|ref|NP_127340.1| - 2.7e-07 30.3 0.1 2.9e-05 23.7 0.0 2.3 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.19 gi|14521864|ref|NP_127340.1| - 7.4e-07 29.4 0.0 1.3e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 gi|14521864|ref|NP_127340.1| - 1e-06 27.8 0.1 4.4e-06 25.7 0.1 1.9 1 1 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|14521864|ref|NP_127340.1| - 0.00024 20.3 0.0 0.0012 18.0 0.0 1.8 2 0 0 2 2 2 1 NAD synthase RecR PF02132.15 gi|14521864|ref|NP_127340.1| - 0.0011 18.4 1.4 0.0011 18.4 1.4 2.6 3 0 0 3 3 3 1 RecR protein Rhodanese PF00581.20 gi|14521864|ref|NP_127340.1| - 0.13 12.8 0.1 0.26 11.8 0.1 1.5 1 0 0 1 1 1 0 Rhodanese-like domain DUF1241 PF06840.11 gi|14521864|ref|NP_127340.1| - 0.17 11.5 0.1 0.34 10.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1241) zn-ribbon_14 PF16503.5 gi|14521864|ref|NP_127340.1| - 1.4 8.5 8.4 0.11 12.1 2.1 2.4 2 0 0 2 2 2 0 Zinc-ribbon C1_2 PF03107.16 gi|14521864|ref|NP_127340.1| - 4.7 7.6 11.5 3 8.3 1.7 3.4 3 0 0 3 3 3 0 C1 domain Transp_Tc5_C PF04236.15 gi|14521864|ref|NP_127340.1| - 9.2 6.7 8.4 1.4 9.3 1.7 2.5 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain Glyco_tranf_2_3 PF13641.6 gi|14521866|ref|NP_127342.1| - 4.4e-30 105.3 0.1 1.2e-29 103.9 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|14521866|ref|NP_127342.1| - 3.6e-24 85.8 8.2 3.6e-24 85.8 8.2 1.9 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|14521866|ref|NP_127342.1| - 8.6e-23 81.0 0.1 1.5e-22 80.2 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|14521866|ref|NP_127342.1| - 8.9e-11 41.6 0.0 3.6e-10 39.6 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 gi|14521866|ref|NP_127342.1| - 3e-06 27.6 0.1 9e-06 26.1 0.0 1.8 3 0 0 3 3 3 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|14521866|ref|NP_127342.1| - 0.00047 19.7 0.0 0.00098 18.7 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 gi|14521866|ref|NP_127342.1| - 0.0056 15.4 0.0 0.037 12.6 0.0 2.2 1 1 0 2 2 2 1 Chitin synthase NTP_transferase PF00483.23 gi|14521866|ref|NP_127342.1| - 0.035 13.7 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase ATP-synt_F PF01990.17 gi|14521866|ref|NP_127342.1| - 0.04 14.3 0.0 0.076 13.4 0.0 1.4 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit PTPS_related PF10131.9 gi|14521868|ref|NP_127344.1| - 9e-76 255.5 12.1 1.2e-75 255.2 12.1 1.1 1 0 0 1 1 1 1 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein tRNA-synt_2c PF01411.19 gi|14521870|ref|NP_127346.1| - 1.1e-162 542.4 0.0 1.9e-162 541.6 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|14521870|ref|NP_127346.1| - 1.3e-22 80.7 6.3 1.3e-22 80.7 6.3 2.0 2 0 0 2 2 2 1 DHHA1 domain tRNA_SAD PF07973.14 gi|14521870|ref|NP_127346.1| - 6e-16 58.3 0.3 1.5e-15 57.0 0.3 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain BORCS8 PF10167.9 gi|14521870|ref|NP_127346.1| - 0.32 10.9 1.3 1.1 9.2 0.1 2.5 3 0 0 3 3 3 0 BLOC-1-related complex sub-unit 8 TFA2_Winged_2 PF18121.1 gi|14521870|ref|NP_127346.1| - 0.77 9.5 6.4 2.6 7.8 0.0 3.9 4 0 0 4 4 4 0 TFA2 Winged helix domain 2 Med9 PF07544.13 gi|14521871|ref|NP_127347.1| - 9.2e-05 22.5 3.7 9.2e-05 22.5 3.7 2.1 1 1 1 2 2 2 1 RNA polymerase II transcription mediator complex subunit 9 YabA PF06156.13 gi|14521871|ref|NP_127347.1| - 0.00021 21.9 4.5 0.00028 21.5 4.5 1.3 1 0 0 1 1 1 1 Initiation control protein YabA DUF724 PF05266.14 gi|14521871|ref|NP_127347.1| - 0.00034 20.5 2.6 0.00045 20.1 2.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF724) TolA_bind_tri PF16331.5 gi|14521871|ref|NP_127347.1| - 0.00044 20.3 5.4 0.00054 20.0 5.4 1.1 1 0 0 1 1 1 1 TolA binding protein trimerisation KLRAQ PF10205.9 gi|14521871|ref|NP_127347.1| - 0.0012 19.0 4.5 0.0014 18.8 4.5 1.2 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein ABC_tran_CTD PF16326.5 gi|14521871|ref|NP_127347.1| - 0.003 17.8 8.7 0.0049 17.1 8.7 1.3 1 0 0 1 1 1 1 ABC transporter C-terminal domain Jnk-SapK_ap_N PF09744.9 gi|14521871|ref|NP_127347.1| - 0.0034 17.6 4.5 0.0044 17.3 4.5 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Mod_r PF07200.13 gi|14521871|ref|NP_127347.1| - 0.0043 17.2 3.9 0.0048 17.0 3.9 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein DUF1818 PF08848.11 gi|14521871|ref|NP_127347.1| - 0.0046 17.0 2.2 0.0055 16.8 2.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1818) TMF_TATA_bd PF12325.8 gi|14521871|ref|NP_127347.1| - 0.0048 17.1 7.4 0.0062 16.8 7.4 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Taxilin PF09728.9 gi|14521871|ref|NP_127347.1| - 0.0059 15.8 9.5 0.0073 15.5 9.5 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein CENP-H PF05837.12 gi|14521871|ref|NP_127347.1| - 0.01 16.2 1.4 0.012 16.1 1.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 gi|14521871|ref|NP_127347.1| - 0.011 16.3 8.4 0.015 15.8 8.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF16 PF01519.16 gi|14521871|ref|NP_127347.1| - 0.011 16.2 2.9 0.015 15.8 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 TMF_DNA_bd PF12329.8 gi|14521871|ref|NP_127347.1| - 0.013 15.5 10.1 0.018 15.0 10.1 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF4988 PF16378.5 gi|14521871|ref|NP_127347.1| - 0.015 15.0 1.0 0.019 14.7 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function DivIC PF04977.15 gi|14521871|ref|NP_127347.1| - 0.016 15.0 9.5 0.45 10.3 3.1 2.1 1 1 1 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 gi|14521871|ref|NP_127347.1| - 0.017 15.3 6.2 0.018 15.2 6.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Bap31_Bap29_C PF18035.1 gi|14521871|ref|NP_127347.1| - 0.02 14.9 3.8 0.038 14.0 3.8 1.5 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Sec8_exocyst PF04048.14 gi|14521871|ref|NP_127347.1| - 0.023 14.6 1.9 0.027 14.4 1.9 1.1 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain BRE1 PF08647.11 gi|14521871|ref|NP_127347.1| - 0.024 14.7 6.7 0.034 14.2 6.7 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase LRRFIP PF09738.9 gi|14521871|ref|NP_127347.1| - 0.026 14.0 7.2 0.028 13.9 7.2 1.0 1 0 0 1 1 1 0 LRRFIP family Fez1 PF06818.15 gi|14521871|ref|NP_127347.1| - 0.027 14.9 3.9 0.029 14.8 3.9 1.1 1 0 0 1 1 1 0 Fez1 ATG16 PF08614.11 gi|14521871|ref|NP_127347.1| - 0.036 14.3 6.2 0.044 14.0 6.2 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Lzipper-MIP1 PF14389.6 gi|14521871|ref|NP_127347.1| - 0.037 14.3 3.8 0.037 14.3 3.8 2.1 1 1 1 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 AAA_13 PF13166.6 gi|14521871|ref|NP_127347.1| - 0.038 12.6 4.4 0.039 12.6 4.4 1.0 1 0 0 1 1 1 0 AAA domain GvpK PF05121.12 gi|14521871|ref|NP_127347.1| - 0.038 14.0 2.8 0.068 13.2 1.2 2.0 1 1 1 2 2 2 0 Gas vesicle protein K PspA_IM30 PF04012.12 gi|14521871|ref|NP_127347.1| - 0.045 13.3 5.2 0.4 10.2 5.2 1.9 1 1 0 1 1 1 0 PspA/IM30 family FAM76 PF16046.5 gi|14521871|ref|NP_127347.1| - 0.046 13.1 2.7 0.054 12.8 2.7 1.1 1 0 0 1 1 1 0 FAM76 protein Swi5 PF07061.11 gi|14521871|ref|NP_127347.1| - 0.048 13.8 6.1 0.28 11.3 6.1 1.9 1 1 0 1 1 1 0 Swi5 Resolvase PF00239.21 gi|14521871|ref|NP_127347.1| - 0.05 13.7 0.2 4.5 7.4 0.1 2.1 1 1 1 2 2 2 0 Resolvase, N terminal domain ZapB PF06005.12 gi|14521871|ref|NP_127347.1| - 0.059 13.8 12.7 1.1 9.8 12.0 2.3 1 1 1 2 2 2 0 Cell division protein ZapB BLOC1_2 PF10046.9 gi|14521871|ref|NP_127347.1| - 0.069 13.5 8.2 1.2 9.5 0.8 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2203 PF09969.9 gi|14521871|ref|NP_127347.1| - 0.072 13.8 1.4 0.092 13.5 1.4 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) SlyX PF04102.12 gi|14521871|ref|NP_127347.1| - 0.089 13.4 6.7 0.14 12.8 6.7 1.5 1 1 0 1 1 1 0 SlyX Thioredoxin_8 PF13905.6 gi|14521871|ref|NP_127347.1| - 0.089 13.1 0.4 0.14 12.5 0.4 1.3 1 0 0 1 1 1 0 Thioredoxin-like GIT_CC PF16559.5 gi|14521871|ref|NP_127347.1| - 0.09 12.7 3.3 0.14 12.0 3.2 1.4 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor USP8_interact PF08941.10 gi|14521871|ref|NP_127347.1| - 0.099 12.5 1.2 0.12 12.2 1.2 1.1 1 0 0 1 1 1 0 USP8 interacting Paramyxo_C PF01692.18 gi|14521871|ref|NP_127347.1| - 0.11 11.9 2.5 0.12 11.7 2.5 1.1 1 0 0 1 1 1 0 Paramyxovirus non-structural protein C ACCA PF03255.14 gi|14521871|ref|NP_127347.1| - 0.15 12.0 1.9 0.19 11.6 1.9 1.2 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF755 PF05501.11 gi|14521871|ref|NP_127347.1| - 0.15 12.3 0.7 0.18 12.1 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Spc29 PF17082.5 gi|14521871|ref|NP_127347.1| - 0.15 11.8 3.7 0.17 11.7 3.7 1.1 1 0 0 1 1 1 0 Spindle Pole Component 29 Spc24 PF08286.11 gi|14521871|ref|NP_127347.1| - 0.18 12.1 6.8 1.3 9.3 6.8 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 SKA2 PF16740.5 gi|14521871|ref|NP_127347.1| - 0.23 11.3 6.4 0.26 11.1 6.4 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Nup54 PF13874.6 gi|14521871|ref|NP_127347.1| - 0.24 11.5 4.7 0.27 11.4 4.7 1.1 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 Cnn_1N PF07989.11 gi|14521871|ref|NP_127347.1| - 0.31 11.2 12.5 0.31 11.2 10.8 1.9 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF465 PF04325.13 gi|14521871|ref|NP_127347.1| - 0.36 10.9 9.3 0.37 10.9 2.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF465) bZIP_2 PF07716.15 gi|14521871|ref|NP_127347.1| - 0.36 10.9 9.2 3.9 7.6 1.5 2.4 1 1 1 2 2 2 0 Basic region leucine zipper bZIP_1 PF00170.21 gi|14521871|ref|NP_127347.1| - 0.41 10.8 10.1 0.71 10.0 3.1 2.3 1 1 1 2 2 2 0 bZIP transcription factor Hemagglutinin PF00509.18 gi|14521871|ref|NP_127347.1| - 0.43 8.9 3.0 0.47 8.8 3.0 1.0 1 0 0 1 1 1 0 Haemagglutinin Fib_alpha PF08702.10 gi|14521871|ref|NP_127347.1| - 0.47 10.6 6.2 0.4 10.9 3.1 1.7 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family FapA PF03961.13 gi|14521871|ref|NP_127347.1| - 0.8 8.2 9.2 0.99 7.9 9.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A UPF0449 PF15136.6 gi|14521871|ref|NP_127347.1| - 0.82 10.2 5.1 1.4 9.4 1.3 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 GPS2_interact PF15784.5 gi|14521871|ref|NP_127347.1| - 1.1 9.8 8.9 3 8.4 8.9 1.9 1 1 0 1 1 1 0 G-protein pathway suppressor 2-interacting domain IHO1 PF15771.5 gi|14521871|ref|NP_127347.1| - 1.1 7.9 4.8 1.2 7.8 4.8 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 Csm1_N PF18504.1 gi|14521871|ref|NP_127347.1| - 1.3 9.4 9.2 4.4 7.7 2.3 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain zf-C4H2 PF10146.9 gi|14521871|ref|NP_127347.1| - 1.4 9.2 6.9 1.6 9.0 6.9 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein TSC22 PF01166.18 gi|14521871|ref|NP_127347.1| - 4.1 7.8 10.7 1.6e+02 2.7 10.7 2.3 1 1 0 1 1 1 0 TSC-22/dip/bun family YvrJ PF12841.7 gi|14521871|ref|NP_127347.1| - 7.5 6.2 7.6 12 5.5 1.0 2.3 2 0 0 2 2 2 0 YvrJ protein family Acetyltransf_1 PF00583.25 gi|14521872|ref|NP_127348.1| - 4.5e-25 88.2 0.0 5.7e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|14521872|ref|NP_127348.1| - 3.4e-17 62.6 0.0 4.9e-17 62.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|14521872|ref|NP_127348.1| - 2.1e-16 60.0 0.0 2.7e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|14521872|ref|NP_127348.1| - 7.9e-11 41.8 0.0 1.2e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|14521872|ref|NP_127348.1| - 2.6e-08 34.0 0.0 8.8e-07 29.1 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|14521872|ref|NP_127348.1| - 3.8e-07 30.4 0.1 4.4e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|14521872|ref|NP_127348.1| - 4.5e-07 29.7 0.0 1.8e-06 27.7 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|14521872|ref|NP_127348.1| - 6.6e-06 26.8 0.0 8.3e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|14521872|ref|NP_127348.1| - 8.7e-05 22.6 0.0 0.00015 21.8 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|14521872|ref|NP_127348.1| - 9.9e-05 22.0 0.0 0.00015 21.4 0.0 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_6 PF13480.7 gi|14521872|ref|NP_127348.1| - 0.00043 20.4 0.0 0.00061 20.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|14521872|ref|NP_127348.1| - 0.052 13.0 0.1 0.13 11.7 0.1 1.6 1 1 0 1 1 1 0 Putative acetyl-transferase tRNA_int_endo PF01974.17 gi|14521873|ref|NP_127349.1| - 1.3e-31 108.5 1.5 2e-31 107.9 0.8 1.6 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|14521873|ref|NP_127349.1| - 7.4e-22 76.8 0.9 1.4e-21 75.9 0.9 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|14521873|ref|NP_127349.1| - 0.00066 19.8 0.2 0.01 16.0 0.0 2.3 2 0 0 2 2 2 1 tRNA-splicing endonuclease subunit sen54 N-term Sen15 PF09631.10 gi|14521873|ref|NP_127349.1| - 0.0031 17.8 0.0 0.0059 16.9 0.0 1.5 1 0 0 1 1 1 1 Sen15 protein Aminotran_1_2 PF00155.21 gi|14521874|ref|NP_127350.1| - 1.5e-72 244.8 0.0 1.7e-72 244.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|14521874|ref|NP_127350.1| - 5.5e-06 25.1 0.0 1.1e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|14521874|ref|NP_127350.1| - 1.7e-05 24.0 0.0 2.7e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|14521874|ref|NP_127350.1| - 1.7e-05 24.2 0.0 2.9e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.20 gi|14521874|ref|NP_127350.1| - 0.0015 17.4 0.0 0.0022 16.8 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DegT_DnrJ_EryC1 PF01041.17 gi|14521874|ref|NP_127350.1| - 0.031 13.6 0.0 0.46 9.7 0.0 2.4 2 1 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family YcaO PF02624.16 gi|14521874|ref|NP_127350.1| - 0.049 12.9 0.0 0.34 10.1 0.0 2.0 2 0 0 2 2 2 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding tRNA-synt_His PF13393.6 gi|14521875|ref|NP_127351.1| - 5.8e-66 222.9 0.0 7.2e-66 222.6 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|14521875|ref|NP_127351.1| - 9.4e-20 70.6 0.7 1.8e-19 69.6 0.7 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|14521875|ref|NP_127351.1| - 3.2e-14 53.3 0.0 7.8e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 gi|14521875|ref|NP_127351.1| - 1.2e-05 24.6 1.4 0.0027 16.8 0.8 2.5 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|14521875|ref|NP_127351.1| - 0.0046 16.5 0.0 0.014 14.9 0.0 1.7 2 1 0 2 2 2 1 tRNA synthetases class II core domain (F) RelB_N PF18506.1 gi|14521875|ref|NP_127351.1| - 1.8 8.5 4.5 30 4.5 0.4 3.0 3 0 0 3 3 3 0 RelB Antitoxin alpha helical domain MarR PF01047.22 gi|33356818|ref|NP_127352.2| - 1e-07 31.7 0.0 4.7e-07 29.6 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|33356818|ref|NP_127352.2| - 1.2e-06 28.9 0.0 4.1e-06 27.2 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|33356818|ref|NP_127352.2| - 2.2e-06 27.5 0.0 2.1e-05 24.3 0.0 2.2 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|33356818|ref|NP_127352.2| - 5.8e-06 26.1 0.3 3.3e-05 23.7 0.0 2.1 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|33356818|ref|NP_127352.2| - 7.2e-06 26.0 0.0 0.0014 18.6 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|33356818|ref|NP_127352.2| - 2.3e-05 24.2 0.4 0.00046 20.0 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|33356818|ref|NP_127352.2| - 0.00011 21.9 0.2 0.012 15.3 0.0 3.1 3 1 0 3 3 3 1 IclR helix-turn-helix domain GntR PF00392.21 gi|33356818|ref|NP_127352.2| - 0.00056 19.5 0.1 0.073 12.7 0.0 3.3 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|33356818|ref|NP_127352.2| - 0.00086 18.8 0.5 0.0077 15.8 0.0 2.6 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|33356818|ref|NP_127352.2| - 0.002 18.0 0.1 0.024 14.6 0.0 2.3 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|33356818|ref|NP_127352.2| - 0.0049 16.8 0.1 0.76 9.8 0.0 2.8 3 0 0 3 3 3 1 Helix-turn-helix domain SMC_ScpB PF04079.16 gi|33356818|ref|NP_127352.2| - 0.0081 15.8 1.0 0.35 10.5 0.0 2.5 1 1 0 2 2 2 1 Segregation and condensation complex subunit ScpB DUF641 PF04859.12 gi|33356818|ref|NP_127352.2| - 0.018 15.3 0.4 0.032 14.6 0.4 1.4 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Sigma70_r4 PF04545.16 gi|33356818|ref|NP_127352.2| - 0.034 13.7 0.2 0.21 11.2 0.0 2.4 2 1 1 3 3 3 0 Sigma-70, region 4 HTH_47 PF16221.5 gi|33356818|ref|NP_127352.2| - 0.048 13.2 0.0 0.16 11.6 0.0 1.9 1 1 1 2 2 2 0 winged helix-turn-helix RepL PF05732.11 gi|33356818|ref|NP_127352.2| - 0.052 13.0 0.3 0.25 10.8 0.0 2.0 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) HetR_C PF18460.1 gi|33356818|ref|NP_127352.2| - 0.075 13.0 0.5 0.19 11.7 0.4 1.8 1 1 0 1 1 1 0 Heterocyst differentiation regulator C-terminal Hood domain DNA_primase_lrg PF04104.14 gi|33356818|ref|NP_127352.2| - 0.093 12.1 0.4 0.14 11.5 0.4 1.4 1 0 0 1 1 1 0 Eukaryotic and archaeal DNA primase, large subunit RPA_C PF08784.11 gi|33356818|ref|NP_127352.2| - 0.1 13.2 0.1 4.3 8.0 0.0 2.4 2 1 0 2 2 2 0 Replication protein A C terminal MMPL PF03176.15 gi|14521877|ref|NP_127353.1| - 1e-65 221.9 6.0 1.1e-36 126.5 0.2 2.2 2 0 0 2 2 2 2 MMPL family Patched PF02460.18 gi|14521877|ref|NP_127353.1| - 5.1e-18 64.6 23.6 3e-08 32.2 2.4 4.0 3 1 1 4 4 4 4 Patched family SecD_SecF PF02355.16 gi|14521877|ref|NP_127353.1| - 1.6e-14 53.7 21.6 2.3e-09 36.9 4.2 3.4 3 0 0 3 3 3 2 Protein export membrane protein Sterol-sensing PF12349.8 gi|14521877|ref|NP_127353.1| - 1.2e-10 41.4 5.3 1.6e-05 24.8 0.6 2.6 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation CorC_HlyC PF03471.17 gi|14521877|ref|NP_127353.1| - 9e-05 22.4 0.1 1.7 8.7 0.0 3.8 4 0 0 4 4 4 2 Transporter associated domain NPCBM_assoc PF10633.9 gi|14521878|ref|NP_127354.1| - 2.6e-18 66.0 0.0 0.00076 19.7 0.0 7.9 7 2 0 7 7 7 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|14521878|ref|NP_127354.1| - 1.6e-15 57.2 1.8 0.045 14.0 0.1 5.9 6 0 0 6 6 6 4 CARDB DUF11 PF01345.18 gi|14521878|ref|NP_127354.1| - 1.8e-09 37.7 0.7 0.26 11.6 0.0 5.5 4 1 1 5 5 5 2 Domain of unknown function DUF11 Transglut_C PF00927.22 gi|14521878|ref|NP_127354.1| - 1.9e-07 31.1 0.0 0.9 9.7 0.0 4.8 4 0 0 4 4 4 2 Transglutaminase family, C-terminal ig like domain DUF4832 PF16116.5 gi|14521878|ref|NP_127354.1| - 3.7e-05 23.7 0.1 3.6 7.4 0.0 5.9 5 2 0 5 5 5 1 Domain of unknown function (DUF4832) DUF4625 PF15418.6 gi|14521878|ref|NP_127354.1| - 0.00041 20.6 0.5 3.4 7.9 0.0 3.9 4 0 0 4 4 4 1 Domain of unknown function (DUF4625) TRAP_beta PF05753.14 gi|14521878|ref|NP_127354.1| - 0.00057 19.3 1.7 5.9 6.2 0.1 4.7 5 0 0 5 5 5 1 Translocon-associated protein beta (TRAPB) ASH PF15780.5 gi|14521878|ref|NP_127354.1| - 0.0016 18.6 2.3 7.7 6.8 0.1 4.4 5 0 0 5 5 4 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin MG2 PF01835.19 gi|14521878|ref|NP_127354.1| - 0.0018 18.7 0.0 13 6.3 0.0 4.4 4 1 0 4 4 4 0 MG2 domain DUF4352 PF11611.8 gi|14521878|ref|NP_127354.1| - 0.0028 17.9 3.6 6 7.2 0.1 4.5 4 1 0 4 4 4 2 Domain of unknown function (DUF4352) N_BRCA1_IG PF16158.5 gi|14521878|ref|NP_127354.1| - 0.011 16.4 0.0 7.2 7.4 0.0 3.9 3 1 0 3 3 3 0 Ig-like domain from next to BRCA1 gene Motile_Sperm PF00635.26 gi|14521878|ref|NP_127354.1| - 0.024 14.5 0.8 17 5.3 0.0 3.9 3 0 0 3 3 3 0 MSP (Major sperm protein) domain Flo11 PF10182.9 gi|14521878|ref|NP_127354.1| - 0.078 13.1 1.0 0.47 10.6 0.1 2.6 3 0 0 3 3 3 0 Flo11 domain DUF3324 PF11797.8 gi|14521878|ref|NP_127354.1| - 0.094 12.7 1.3 0.54 10.2 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function C-terminal (DUF3324) Arrestin_C PF02752.22 gi|14521878|ref|NP_127354.1| - 7.6 7.0 8.1 57 4.2 0.1 4.3 4 1 0 4 4 4 0 Arrestin (or S-antigen), C-terminal domain DUF373 PF04123.13 gi|33356819|ref|NP_127355.2| - 3.7e-103 345.5 9.5 4.6e-103 345.2 9.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) Thiamine_BP PF01910.17 gi|14521880|ref|NP_127356.1| - 1.3e-32 111.5 0.1 1.5e-32 111.3 0.1 1.0 1 0 0 1 1 1 1 Thiamine-binding protein YscJ_FliF PF01514.17 gi|14521880|ref|NP_127356.1| - 0.038 13.6 0.0 0.052 13.2 0.0 1.5 1 1 0 1 1 1 0 Secretory protein of YscJ/FliF family AP_endonuc_2 PF01261.24 gi|14521881|ref|NP_127357.1| - 2.4e-19 69.6 0.1 3.2e-19 69.2 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Amidohydro_1 PF01979.20 gi|14521881|ref|NP_127357.1| - 0.014 14.8 0.1 0.073 12.4 0.0 2.0 2 0 0 2 2 2 0 Amidohydrolase family DUF2345 PF10106.9 gi|14521881|ref|NP_127357.1| - 0.22 11.4 0.0 0.35 10.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) LRR_RI_capping PF18779.1 gi|14521881|ref|NP_127357.1| - 0.23 11.1 3.1 0.25 11.0 0.1 2.4 2 0 0 2 2 2 0 Capping Ribonuclease inhibitor Leucine Rich Repeat Pyrophosphatase PF00719.19 gi|14521882|ref|NP_127358.1| - 1.2e-55 187.7 0.2 1.3e-55 187.5 0.2 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase SHS2_Rpb7-N PF03876.17 gi|14521883|ref|NP_127359.1| - 9.7e-21 73.9 0.2 2.1e-20 72.8 0.1 1.6 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|14521883|ref|NP_127359.1| - 1.4e-14 54.1 1.5 1.4e-14 54.1 1.5 2.4 2 1 0 2 2 2 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|14521883|ref|NP_127359.1| - 0.0022 18.3 0.4 0.01 16.1 0.2 2.1 2 1 0 2 2 2 1 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|33356820|ref|NP_877719.1| - 2.4e-17 62.8 0.2 2.8e-17 62.6 0.2 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger RecR PF02132.15 gi|33356820|ref|NP_877719.1| - 0.00071 19.1 3.7 0.001 18.6 3.7 1.2 1 0 0 1 1 1 1 RecR protein NRDD PF13597.6 gi|33356820|ref|NP_877719.1| - 0.022 13.6 1.0 0.024 13.5 1.0 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase HypA PF01155.19 gi|33356820|ref|NP_877719.1| - 0.04 14.0 0.4 0.048 13.7 0.4 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PolC_DP2 PF03833.13 gi|33356820|ref|NP_877719.1| - 0.095 10.5 0.2 0.079 10.8 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-RRN7 PF11781.8 gi|33356820|ref|NP_877719.1| - 0.13 11.9 0.1 0.13 11.9 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Prim_Zn_Ribbon PF08273.12 gi|33356820|ref|NP_877719.1| - 0.14 12.5 0.9 0.14 12.5 0.9 1.9 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase DUF359 PF04019.12 gi|14521885|ref|NP_127361.1| - 1.7e-39 134.3 0.1 2.2e-39 134.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) DUF3903 PF13043.6 gi|14521885|ref|NP_127361.1| - 0.01 15.6 0.4 0.02 14.6 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) DUF3821 PF12863.7 gi|14521885|ref|NP_127361.1| - 0.056 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3821) Ribosomal_S24e PF01282.19 gi|14521886|ref|NP_127362.1| - 1.7e-26 92.0 0.1 2.2e-26 91.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S24e CitMHS PF03600.16 gi|14521887|ref|NP_127364.1| - 8.2e-59 199.2 23.1 8.2e-59 199.2 23.1 1.9 1 1 1 2 2 2 1 Citrate transporter Na_sulph_symp PF00939.19 gi|14521887|ref|NP_127364.1| - 1.2e-26 93.8 32.3 1e-15 57.8 9.8 2.0 1 1 1 2 2 2 2 Sodium:sulfate symporter transmembrane region ArsB PF02040.15 gi|14521887|ref|NP_127364.1| - 1.4e-24 87.2 24.6 1.8e-24 86.9 24.6 1.1 1 0 0 1 1 1 1 Arsenical pump membrane protein NhaB PF06450.12 gi|14521887|ref|NP_127364.1| - 5.2e-08 32.2 21.8 5.5e-08 32.1 9.0 2.7 3 0 0 3 3 3 2 Bacterial Na+/H+ antiporter B (NhaB) DctM PF06808.12 gi|14521887|ref|NP_127364.1| - 0.35 9.6 31.4 0.15 10.9 17.6 2.4 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporter, DctM component CPP1-like PF11833.8 gi|14521887|ref|NP_127364.1| - 3.1 7.4 8.3 0.5 10.0 1.8 2.6 3 0 0 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Usp PF00582.26 gi|14521888|ref|NP_127365.1| - 8.7e-22 78.2 0.0 1.2e-21 77.7 0.0 1.2 1 0 0 1 1 1 1 Universal stress protein family DUF5603 PF18231.1 gi|14521888|ref|NP_127365.1| - 0.0025 18.1 0.3 0.0042 17.4 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5603) IF2_N PF04760.15 gi|14521888|ref|NP_127365.1| - 0.052 13.4 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region MGS PF02142.22 gi|14521888|ref|NP_127365.1| - 0.056 13.6 0.0 0.074 13.3 0.0 1.3 1 0 0 1 1 1 0 MGS-like domain Aida_N PF08910.10 gi|14521888|ref|NP_127365.1| - 0.13 12.7 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 Aida N-terminus SBP_bac_3 PF00497.20 gi|14521888|ref|NP_127365.1| - 0.15 11.4 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 DUF1059 PF06348.11 gi|14521888|ref|NP_127365.1| - 1.4 9.2 0.0 1.4 9.2 0.0 2.5 4 0 0 4 4 4 0 Protein of unknown function (DUF1059) Methyltrans_SAM PF10672.9 gi|14521889|ref|NP_127366.1| - 6.2e-21 74.8 0.0 9.2e-21 74.2 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Met_10 PF02475.16 gi|14521889|ref|NP_127366.1| - 3.1e-20 72.8 0.2 6.1e-20 71.8 0.2 1.5 1 1 0 1 1 1 1 Met-10+ like-protein PUA_3 PF17785.1 gi|14521889|ref|NP_127366.1| - 3.6e-17 61.9 0.2 8.3e-17 60.8 0.2 1.7 1 0 0 1 1 1 1 PUA-like domain PUA PF01472.20 gi|14521889|ref|NP_127366.1| - 4.9e-16 58.5 1.8 1.3e-15 57.1 1.8 1.8 1 0 0 1 1 1 1 PUA domain Methyltransf_31 PF13847.6 gi|14521889|ref|NP_127366.1| - 1.7e-15 57.1 0.1 4e-15 55.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|14521889|ref|NP_127366.1| - 4.1e-14 52.6 0.0 1e-13 51.4 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|14521889|ref|NP_127366.1| - 7.1e-13 48.5 0.0 1.4e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|14521889|ref|NP_127366.1| - 1e-11 44.8 0.0 1.7e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|14521889|ref|NP_127366.1| - 1.4e-09 38.5 0.0 2.8e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|14521889|ref|NP_127366.1| - 1.1e-08 34.6 0.7 3.1e-08 33.0 0.5 1.9 1 1 0 1 1 1 1 O-methyltransferase MTS PF05175.14 gi|14521889|ref|NP_127366.1| - 2.5e-07 30.4 0.0 4.2e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.16 gi|14521889|ref|NP_127366.1| - 4.9e-07 29.2 0.1 5.7e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_18 PF12847.7 gi|14521889|ref|NP_127366.1| - 1.1e-06 28.7 0.0 3.1e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.18 gi|14521889|ref|NP_127366.1| - 2e-06 27.6 0.0 1.3e-05 25.0 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 gi|14521889|ref|NP_127366.1| - 7.3e-06 25.9 0.0 1.5e-05 24.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521889|ref|NP_127366.1| - 0.00013 22.6 0.0 0.00035 21.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|14521889|ref|NP_127366.1| - 0.00046 19.9 0.0 0.028 14.1 0.0 2.5 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_24 PF13578.6 gi|14521889|ref|NP_127366.1| - 0.0014 19.6 0.0 0.003 18.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|14521889|ref|NP_127366.1| - 0.0024 18.0 0.0 0.0047 17.1 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase RcpC PF16976.5 gi|14521889|ref|NP_127366.1| - 0.019 15.0 0.1 1.6 8.8 0.1 2.6 2 0 0 2 2 2 0 Flp pilus assembly protein RcpC/CpaB ADH_zinc_N PF00107.26 gi|14521889|ref|NP_127366.1| - 0.026 14.5 0.5 0.097 12.7 0.1 2.1 2 0 0 2 2 2 0 Zinc-binding dehydrogenase UPF0113 PF03657.13 gi|14521889|ref|NP_127366.1| - 0.056 13.7 0.6 0.28 11.5 0.2 2.4 1 1 1 2 2 2 0 UPF0113 PUA domain Methyltransf_12 PF08242.12 gi|14521889|ref|NP_127366.1| - 0.06 14.1 0.0 0.13 13.0 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain FACT-Spt16_Nlob PF14826.6 gi|14521889|ref|NP_127366.1| - 0.088 12.6 0.1 0.95 9.2 0.2 2.3 2 0 0 2 2 2 0 FACT complex subunit SPT16 N-terminal lobe domain DUF676 PF05057.14 gi|14521889|ref|NP_127366.1| - 0.14 11.7 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) AsnC_trans_reg PF01037.21 gi|14521890|ref|NP_127367.1| - 2.8e-16 59.3 0.0 4.2e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|14521890|ref|NP_127367.1| - 1.1e-14 53.7 2.6 7.4e-13 47.8 1.2 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|14521890|ref|NP_127367.1| - 1.8e-12 46.9 0.6 3.9e-12 45.8 0.2 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|14521890|ref|NP_127367.1| - 1.4e-06 28.1 0.2 6.4e-06 26.0 0.1 2.1 3 0 0 3 3 3 1 MarR family HTH_20 PF12840.7 gi|14521890|ref|NP_127367.1| - 2.9e-05 24.0 0.0 5.3e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|14521890|ref|NP_127367.1| - 3.2e-05 23.6 0.1 0.0001 22.0 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|14521890|ref|NP_127367.1| - 4.2e-05 23.3 0.6 0.00011 22.1 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|14521890|ref|NP_127367.1| - 0.00026 20.7 0.3 0.0061 16.3 0.1 2.4 2 0 0 2 2 2 1 Homeodomain-like domain MarR PF01047.22 gi|14521890|ref|NP_127367.1| - 0.00034 20.5 0.1 0.00069 19.5 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_8 PF02954.19 gi|14521890|ref|NP_127367.1| - 0.00076 19.2 0.3 0.0015 18.3 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_27 PF13463.6 gi|14521890|ref|NP_127367.1| - 0.00091 19.7 0.1 0.002 18.6 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_30 PF13556.6 gi|14521890|ref|NP_127367.1| - 0.001 18.8 0.1 0.002 17.9 0.1 1.4 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_11 PF08279.12 gi|14521890|ref|NP_127367.1| - 0.0016 18.3 0.4 0.0034 17.3 0.4 1.5 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 gi|14521890|ref|NP_127367.1| - 0.0049 16.5 0.1 0.027 14.1 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|14521890|ref|NP_127367.1| - 0.021 14.6 0.1 0.079 12.8 0.0 1.9 2 0 0 2 2 2 0 HTH DNA binding domain AbiEi_4 PF13338.6 gi|14521890|ref|NP_127367.1| - 0.028 14.6 0.1 0.072 13.3 0.1 1.7 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin B-block_TFIIIC PF04182.12 gi|14521890|ref|NP_127367.1| - 0.033 14.4 0.1 0.095 12.9 0.0 1.7 1 1 1 2 2 2 0 B-block binding subunit of TFIIIC HTH_38 PF13936.6 gi|14521890|ref|NP_127367.1| - 0.037 13.8 3.1 0.38 10.6 0.7 2.6 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521890|ref|NP_127367.1| - 0.059 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 gi|14521890|ref|NP_127367.1| - 0.067 13.3 0.0 0.3 11.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14521890|ref|NP_127367.1| - 0.067 13.2 0.1 0.2 11.6 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain RP-C PF03428.13 gi|14521890|ref|NP_127367.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF2250 PF10007.9 gi|14521890|ref|NP_127367.1| - 0.12 12.5 0.1 0.2 11.8 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Penicillinase_R PF03965.16 gi|14521890|ref|NP_127367.1| - 0.12 12.8 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor HTH_50 PF18024.1 gi|14521890|ref|NP_127367.1| - 0.12 12.0 0.4 0.42 10.3 0.4 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain Ham1p_like PF01725.16 gi|14521891|ref|NP_127368.1| - 9.6e-51 172.4 0.0 1.1e-50 172.2 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Adenosine_kin PF04008.14 gi|14521892|ref|NP_127369.1| - 1.3e-63 213.4 0.7 1.5e-63 213.2 0.7 1.0 1 0 0 1 1 1 1 Adenosine specific kinase HTH_24 PF13412.6 gi|14521893|ref|NP_127370.1| - 7.1e-05 22.3 0.1 0.006 16.1 0.0 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding tRNA-synt_1b PF00579.25 gi|14521895|ref|NP_127372.1| - 1.2e-25 90.5 0.0 1.6e-25 90.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) DUF777 PF05606.11 gi|14521895|ref|NP_127372.1| - 0.099 12.4 0.1 0.22 11.3 0.1 1.7 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF777) UPF0147 PF03685.13 gi|14521896|ref|NP_127373.1| - 1.1e-33 115.1 3.9 1.3e-33 114.8 3.9 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) HrpJ PF07201.11 gi|14521896|ref|NP_127373.1| - 0.1 12.9 0.4 0.13 12.6 0.4 1.2 1 0 0 1 1 1 0 HrpJ-like domain ASCH PF04266.14 gi|14521897|ref|NP_127374.1| - 9.2e-12 45.5 0.0 1.2e-11 45.1 0.0 1.2 1 0 0 1 1 1 1 ASCH domain Sdh5 PF03937.16 gi|14521897|ref|NP_127374.1| - 0.011 15.7 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase Pribosyltran_N PF13793.6 gi|14521898|ref|NP_127375.1| - 6.3e-27 93.8 0.0 6e-23 81.0 0.0 2.4 2 1 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|14521898|ref|NP_127375.1| - 3.8e-17 62.3 1.1 1.3e-16 60.6 0.7 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|14521898|ref|NP_127375.1| - 7.8e-17 61.9 1.9 1.3e-16 61.2 1.6 1.4 1 1 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|14521898|ref|NP_127375.1| - 7.9e-08 32.0 0.2 1.2e-07 31.4 0.2 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|14521898|ref|NP_127375.1| - 0.0035 16.9 0.0 0.0054 16.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase EIIA-man PF03610.16 gi|14521898|ref|NP_127375.1| - 0.035 14.3 0.5 2 8.7 0.1 2.9 3 0 0 3 3 3 0 PTS system fructose IIA component Fe-ADH PF00465.19 gi|14521898|ref|NP_127375.1| - 0.1 11.4 0.1 0.23 10.2 0.1 1.6 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase NTP_transferase PF00483.23 gi|14521899|ref|NP_127376.1| - 2e-42 145.5 0.1 2.5e-42 145.2 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|14521899|ref|NP_127376.1| - 5.8e-19 67.0 37.0 2.5e-09 36.5 2.3 4.8 2 1 4 6 6 6 6 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|14521899|ref|NP_127376.1| - 1.3e-14 54.9 0.0 1.7e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|14521899|ref|NP_127376.1| - 2.7e-13 49.4 21.5 9e-10 38.1 1.5 4.4 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|14521899|ref|NP_127376.1| - 0.0002 21.2 0.0 0.00063 19.5 0.0 1.6 2 1 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|14521899|ref|NP_127376.1| - 0.018 13.2 1.2 0.029 12.5 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) DUF835 PF05763.12 gi|14521900|ref|NP_127377.1| - 4e-29 101.1 0.6 6.4e-29 100.4 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF835) Imm43 PF15570.6 gi|14521900|ref|NP_127377.1| - 0.0088 16.1 0.0 1.9 8.5 0.1 2.5 2 0 0 2 2 2 2 Immunity protein 43 Succ_CoA_lig PF13607.6 gi|14521901|ref|NP_127378.1| - 8.7e-60 200.5 1.4 3.3e-57 192.2 0.2 3.7 4 0 0 4 4 4 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|14521901|ref|NP_127378.1| - 7.5e-25 87.7 3.8 4.3e-24 85.2 0.8 3.0 3 0 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|14521901|ref|NP_127378.1| - 7.7e-16 58.6 3.7 2.2e-15 57.1 2.3 2.4 2 0 0 2 2 2 1 CoA binding domain F420_oxidored PF03807.17 gi|14521901|ref|NP_127378.1| - 0.00062 20.3 0.6 0.00062 20.3 0.6 3.0 3 1 1 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 gi|14521901|ref|NP_127378.1| - 0.0031 18.0 0.5 0.068 13.6 0.3 3.2 3 1 0 3 3 3 1 Semialdehyde dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|14521901|ref|NP_127378.1| - 0.051 13.6 0.0 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Hydrolase_6 PF13344.6 gi|14521901|ref|NP_127378.1| - 0.051 13.7 0.0 2.6 8.2 0.0 2.6 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Asparaginase_C PF17763.1 gi|14521901|ref|NP_127378.1| - 0.053 13.7 1.8 0.49 10.6 0.2 3.0 3 2 1 4 4 4 0 Glutaminase/Asparaginase C-terminal domain GFO_IDH_MocA PF01408.22 gi|14521901|ref|NP_127378.1| - 0.086 13.7 0.2 6.3 7.7 0.0 2.9 2 1 1 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold BNR_3 PF13859.6 gi|14521901|ref|NP_127378.1| - 0.2 10.9 0.0 0.29 10.4 0.0 1.3 1 0 0 1 1 1 0 BNR repeat-like domain HTH_20 PF12840.7 gi|14521903|ref|NP_127380.1| - 6.9e-18 64.5 2.2 1.3e-17 63.6 0.3 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521903|ref|NP_127380.1| - 3.6e-16 58.8 0.2 8.9e-16 57.5 0.2 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|14521903|ref|NP_127380.1| - 6.7e-12 44.8 0.0 2.3e-11 43.1 0.0 2.0 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|14521903|ref|NP_127380.1| - 1.3e-10 41.0 0.4 2.5e-10 40.1 0.1 1.6 2 0 0 2 2 1 1 MarR family HTH_IclR PF09339.10 gi|14521903|ref|NP_127380.1| - 4.2e-10 39.3 0.4 1.8e-09 37.3 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|14521903|ref|NP_127380.1| - 2.6e-09 36.9 3.7 5.8e-09 35.8 0.0 3.0 3 1 0 3 3 3 1 HTH domain TrmB PF01978.19 gi|14521903|ref|NP_127380.1| - 2.7e-09 36.8 0.6 6.9e-09 35.5 0.2 1.8 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|14521903|ref|NP_127380.1| - 2.8e-09 36.8 0.4 6.5e-09 35.6 0.0 1.7 2 0 0 2 2 1 1 MarR family HTH_38 PF13936.6 gi|14521903|ref|NP_127380.1| - 4.8e-07 29.4 0.1 9e-07 28.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|14521903|ref|NP_127380.1| - 4.9e-07 29.6 0.1 1.9e-06 27.7 0.0 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|14521903|ref|NP_127380.1| - 6.2e-07 29.3 0.2 4.3e-06 26.6 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|14521903|ref|NP_127380.1| - 1.8e-06 27.6 0.0 6e-06 25.9 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 gi|14521903|ref|NP_127380.1| - 3.1e-06 27.2 0.1 1e-05 25.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|14521903|ref|NP_127380.1| - 1.1e-05 24.7 0.0 0.00013 21.3 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_Crp_2 PF13545.6 gi|14521903|ref|NP_127380.1| - 1.3e-05 25.1 0.7 0.00013 21.9 0.1 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|14521903|ref|NP_127380.1| - 1.3e-05 25.3 0.1 7.6e-05 22.8 0.1 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_AsnC-type PF13404.6 gi|14521903|ref|NP_127380.1| - 2.1e-05 24.2 0.1 5.7e-05 22.9 0.1 1.8 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain ArsR PF09824.9 gi|14521903|ref|NP_127380.1| - 0.00015 21.4 0.2 0.0013 18.4 0.0 2.1 2 0 0 2 2 2 1 ArsR transcriptional regulator Rrf2 PF02082.20 gi|14521903|ref|NP_127380.1| - 0.00018 21.8 0.4 0.00075 19.8 0.1 2.2 2 1 1 3 3 2 1 Transcriptional regulator DprA_WH PF17782.1 gi|14521903|ref|NP_127380.1| - 0.00023 21.2 0.1 0.0014 18.7 0.0 2.0 2 0 0 2 2 2 1 DprA winged helix domain HTH_26 PF13443.6 gi|14521903|ref|NP_127380.1| - 0.00035 20.9 0.1 0.016 15.6 0.0 2.4 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain GntR PF00392.21 gi|14521903|ref|NP_127380.1| - 0.00053 19.6 1.1 0.0011 18.6 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family Sigma70_r4 PF04545.16 gi|14521903|ref|NP_127380.1| - 0.00062 19.2 0.1 0.0018 17.7 0.1 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_17 PF12728.7 gi|14521903|ref|NP_127380.1| - 0.00077 19.6 0.0 0.002 18.3 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|14521903|ref|NP_127380.1| - 0.00089 19.7 0.9 0.0024 18.4 0.2 2.1 2 1 1 3 3 1 1 Winged helix DNA-binding domain FUR PF01475.19 gi|14521903|ref|NP_127380.1| - 0.001 19.2 1.0 0.0018 18.4 0.1 1.8 2 1 0 2 2 2 1 Ferric uptake regulator family Sigma70_r4_2 PF08281.12 gi|14521903|ref|NP_127380.1| - 0.0021 17.7 0.1 0.0053 16.4 0.1 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 LexA_DNA_bind PF01726.16 gi|14521903|ref|NP_127380.1| - 0.0023 17.7 0.0 0.005 16.6 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_DeoR PF08220.12 gi|14521903|ref|NP_127380.1| - 0.0029 17.3 0.5 0.013 15.2 0.1 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_1 PF00126.27 gi|14521903|ref|NP_127380.1| - 0.0037 17.2 0.0 0.0067 16.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_32 PF13565.6 gi|14521903|ref|NP_127380.1| - 0.0039 17.8 0.1 0.022 15.4 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain B-block_TFIIIC PF04182.12 gi|14521903|ref|NP_127380.1| - 0.0048 17.0 0.0 0.012 15.8 0.0 1.6 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC TetR_N PF00440.23 gi|14521903|ref|NP_127380.1| - 0.014 15.2 0.1 0.051 13.4 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_12 PF08461.10 gi|14521903|ref|NP_127380.1| - 0.016 15.2 0.3 0.049 13.6 0.3 1.9 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_37 PF13744.6 gi|14521903|ref|NP_127380.1| - 0.016 15.1 1.6 6.3 6.8 0.1 3.2 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|14521903|ref|NP_127380.1| - 0.017 15.5 0.4 0.079 13.4 0.4 2.2 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_47 PF16221.5 gi|14521903|ref|NP_127380.1| - 0.018 14.6 0.0 0.23 11.0 0.0 2.2 2 0 0 2 2 2 0 winged helix-turn-helix HTH_22 PF13309.6 gi|14521903|ref|NP_127380.1| - 0.019 15.1 0.1 0.077 13.1 0.1 2.2 1 1 0 1 1 1 0 HTH domain DUF2513 PF10711.9 gi|14521903|ref|NP_127380.1| - 0.031 14.6 0.3 0.3 11.4 0.0 2.1 2 0 0 2 2 2 0 Hypothetical protein (DUF2513) HTH_34 PF13601.6 gi|14521903|ref|NP_127380.1| - 0.032 14.4 0.6 0.16 12.1 0.0 2.3 3 0 0 3 3 2 0 Winged helix DNA-binding domain UPF0122 PF04297.14 gi|14521903|ref|NP_127380.1| - 0.037 14.3 0.1 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like Dimerisation2 PF16864.5 gi|14521903|ref|NP_127380.1| - 0.04 13.9 0.0 0.09 12.8 0.0 1.6 1 0 0 1 1 1 0 Dimerisation domain PadR PF03551.14 gi|14521903|ref|NP_127380.1| - 0.044 13.8 0.6 0.13 12.2 0.1 2.1 2 1 0 2 2 2 0 Transcriptional regulator PadR-like family DUF592 PF04574.13 gi|14521903|ref|NP_127380.1| - 0.048 13.4 1.4 0.082 12.7 0.2 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF592) Mga PF05043.13 gi|14521903|ref|NP_127380.1| - 0.051 14.2 0.6 0.28 11.8 0.0 2.3 3 0 0 3 3 2 0 Mga helix-turn-helix domain Penicillinase_R PF03965.16 gi|14521903|ref|NP_127380.1| - 0.058 13.7 0.3 0.19 12.1 0.1 2.1 1 1 1 2 2 2 0 Penicillinase repressor Bac_DnaA_C PF08299.11 gi|14521903|ref|NP_127380.1| - 0.12 12.4 0.2 0.31 11.1 0.0 1.8 2 0 0 2 2 1 0 Bacterial dnaA protein helix-turn-helix HTH_10 PF04967.12 gi|14521903|ref|NP_127380.1| - 0.13 12.1 0.2 0.41 10.5 0.0 1.9 2 0 0 2 2 1 0 HTH DNA binding domain HTH_7 PF02796.15 gi|14521903|ref|NP_127380.1| - 0.14 12.3 0.0 0.35 11.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF211 PF02680.14 gi|33356822|ref|NP_127381.2| - 1.2e-37 128.0 2.6 1.3e-37 127.8 2.6 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Streptin-Immun PF11083.8 gi|33356822|ref|NP_127381.2| - 0.0078 16.6 0.3 0.012 16.0 0.3 1.3 1 0 0 1 1 1 1 Lantibiotic streptin immunity protein HTH_20 PF12840.7 gi|14521905|ref|NP_127382.1| - 1.2e-15 57.3 0.1 5.2e-15 55.3 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|14521905|ref|NP_127382.1| - 1.6e-15 56.6 0.2 3.2e-15 55.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|14521905|ref|NP_127382.1| - 7.5e-09 35.0 1.1 1.4e-08 34.1 0.5 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|14521905|ref|NP_127382.1| - 2.4e-07 30.6 0.4 6.3e-07 29.2 0.4 1.8 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|14521905|ref|NP_127382.1| - 7.1e-07 29.0 0.2 1.6e-06 27.9 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|14521905|ref|NP_127382.1| - 8.8e-07 28.7 0.0 2.2e-06 27.5 0.0 1.7 1 0 0 1 1 1 1 MarR family DUF2513 PF10711.9 gi|14521905|ref|NP_127382.1| - 1.3e-05 25.4 1.5 0.0012 19.1 0.1 2.3 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) ArsR PF09824.9 gi|14521905|ref|NP_127382.1| - 6.2e-05 22.7 0.8 0.00015 21.4 0.4 1.9 1 1 0 1 1 1 1 ArsR transcriptional regulator HTH_23 PF13384.6 gi|14521905|ref|NP_127382.1| - 6.4e-05 22.6 0.0 0.00012 21.7 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|14521905|ref|NP_127382.1| - 8.6e-05 22.5 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_38 PF13936.6 gi|14521905|ref|NP_127382.1| - 0.00014 21.5 0.7 0.00034 20.3 0.3 1.9 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|14521905|ref|NP_127382.1| - 0.00025 21.0 0.7 0.0019 18.2 0.2 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain mTERF PF02536.14 gi|14521905|ref|NP_127382.1| - 0.00031 19.8 1.8 0.32 9.9 0.1 2.8 2 1 0 2 2 2 2 mTERF HTH_28 PF13518.6 gi|14521905|ref|NP_127382.1| - 0.00032 20.8 0.0 0.00058 19.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|14521905|ref|NP_127382.1| - 0.0015 18.7 0.1 0.0045 17.1 0.1 1.8 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|14521905|ref|NP_127382.1| - 0.0016 18.6 0.2 0.0059 16.8 0.1 2.0 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|14521905|ref|NP_127382.1| - 0.0018 18.1 1.4 0.0018 18.1 1.4 2.3 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_40 PF14493.6 gi|14521905|ref|NP_127382.1| - 0.002 18.6 4.5 0.036 14.5 4.5 2.3 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|14521905|ref|NP_127382.1| - 0.0022 18.5 0.2 0.0061 17.0 0.2 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_3 PF01381.22 gi|14521905|ref|NP_127382.1| - 0.0025 17.9 0.2 0.21 11.7 0.1 2.6 2 0 0 2 2 2 1 Helix-turn-helix Isy1 PF06246.12 gi|14521905|ref|NP_127382.1| - 0.0046 16.6 2.5 0.0053 16.4 2.5 1.1 1 0 0 1 1 1 1 Isy1-like splicing family Sigma70_r4_2 PF08281.12 gi|14521905|ref|NP_127382.1| - 0.0054 16.4 0.7 0.013 15.1 0.2 2.0 2 0 0 2 2 1 1 Sigma-70, region 4 Rrf2 PF02082.20 gi|14521905|ref|NP_127382.1| - 0.0057 17.0 0.1 0.016 15.5 0.1 1.7 1 0 0 1 1 1 1 Transcriptional regulator HTH_DeoR PF08220.12 gi|14521905|ref|NP_127382.1| - 0.0098 15.6 0.3 0.028 14.2 0.3 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|14521905|ref|NP_127382.1| - 0.0099 15.7 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sigma70_r4 PF04545.16 gi|14521905|ref|NP_127382.1| - 0.016 14.7 0.2 0.041 13.4 0.2 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 DUF592 PF04574.13 gi|14521905|ref|NP_127382.1| - 0.017 14.9 1.9 0.044 13.5 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF592) MarR PF01047.22 gi|14521905|ref|NP_127382.1| - 0.018 15.0 1.0 0.037 14.0 0.3 1.8 2 0 0 2 2 1 0 MarR family HTH_17 PF12728.7 gi|14521905|ref|NP_127382.1| - 0.032 14.4 0.3 0.2 11.9 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Mga PF08280.11 gi|14521905|ref|NP_127382.1| - 0.036 14.1 0.1 0.12 12.4 0.1 1.9 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain DUF1456 PF07308.13 gi|14521905|ref|NP_127382.1| - 0.055 13.8 3.1 0.28 11.5 0.7 2.7 2 2 0 2 2 2 0 Protein of unknown function (DUF1456) LPD11 PF18824.1 gi|14521905|ref|NP_127382.1| - 0.072 13.2 4.8 0.13 12.4 2.3 2.6 2 2 1 3 3 1 0 Large polyvalent protein-associated domain 11 HTH_CodY PF08222.11 gi|14521905|ref|NP_127382.1| - 0.097 12.2 0.0 0.21 11.1 0.0 1.6 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_WhiA PF02650.14 gi|14521905|ref|NP_127382.1| - 0.46 10.8 7.1 0.44 10.9 0.4 3.0 3 1 0 3 3 3 0 WhiA C-terminal HTH domain FeoB_Cyto PF17910.1 gi|14521905|ref|NP_127382.1| - 0.51 10.9 3.8 1.5 9.4 0.9 2.4 2 0 0 2 2 2 0 FeoB cytosolic helical domain Acetyltransf_1 PF00583.25 gi|14521906|ref|NP_127383.1| - 1.5e-20 73.6 0.6 1.9e-20 73.3 0.6 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|14521906|ref|NP_127383.1| - 2e-14 53.6 0.0 2.7e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|14521906|ref|NP_127383.1| - 2.6e-14 53.4 0.4 4e-14 52.8 0.4 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|14521906|ref|NP_127383.1| - 3.8e-07 30.0 0.0 5.7e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|14521906|ref|NP_127383.1| - 0.0011 19.6 0.1 0.0013 19.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|14521906|ref|NP_127383.1| - 0.0016 18.6 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|14521906|ref|NP_127383.1| - 0.003 17.7 0.0 0.0047 17.0 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GAD-like PF08887.11 gi|14521906|ref|NP_127383.1| - 0.0068 16.2 0.1 0.011 15.5 0.1 1.3 1 0 0 1 1 1 1 GAD-like domain PanZ PF12568.8 gi|14521906|ref|NP_127383.1| - 0.0092 15.7 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_9 PF13527.7 gi|14521906|ref|NP_127383.1| - 0.024 14.7 0.0 0.034 14.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF1514 PF07438.11 gi|14521906|ref|NP_127383.1| - 0.027 14.3 0.7 0.066 13.1 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) Acetyltransf_15 PF17013.5 gi|14521906|ref|NP_127383.1| - 0.069 12.6 0.0 0.14 11.7 0.0 1.4 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_8 PF13523.6 gi|14521906|ref|NP_127383.1| - 0.16 11.7 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HD PF01966.22 gi|14521907|ref|NP_127384.1| - 3.9e-21 75.5 0.5 3.9e-21 75.5 0.5 1.7 2 0 0 2 2 2 1 HD domain DUF212 PF02681.14 gi|14521907|ref|NP_127384.1| - 0.14 12.3 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Divergent PAP2 family DUF4392 PF14336.6 gi|14521908|ref|NP_127385.1| - 2.3e-59 201.3 0.0 4e-57 193.9 0.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4392) HAD_2 PF13419.6 gi|14521909|ref|NP_127386.1| - 3.2e-31 108.8 0.0 4.3e-31 108.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521909|ref|NP_127386.1| - 4e-19 69.8 0.0 1.6e-18 67.8 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|14521909|ref|NP_127386.1| - 4.7e-12 45.8 0.0 1.1e-11 44.6 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|14521909|ref|NP_127386.1| - 1.7e-06 28.6 0.0 2.2e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.18 gi|14521909|ref|NP_127386.1| - 0.0011 18.8 0.0 0.007 16.1 0.0 2.0 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase PGP_phosphatase PF09419.10 gi|14521909|ref|NP_127386.1| - 0.078 12.6 0.0 1.2 8.7 0.0 2.5 3 0 0 3 3 3 0 Mitochondrial PGP phosphatase FtsZ_C PF12327.8 gi|14521910|ref|NP_127387.1| - 0.018 15.4 0.1 0.039 14.2 0.1 1.5 1 0 0 1 1 1 0 FtsZ family, C-terminal domain OMPdecase PF00215.24 gi|14521911|ref|NP_127388.1| - 6.1e-28 98.0 7.0 6.6e-28 97.8 5.9 1.6 2 0 0 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family SIS PF01380.22 gi|14521911|ref|NP_127388.1| - 2.1e-21 76.1 0.0 6.9e-21 74.5 0.0 1.9 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|14521911|ref|NP_127388.1| - 1.3e-10 41.4 1.7 6.3e-08 32.7 0.2 2.9 1 1 1 2 2 2 2 SIS domain ThiG PF05690.14 gi|14521911|ref|NP_127388.1| - 1.1e-07 31.5 1.0 2e-07 30.6 1.0 1.4 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|14521911|ref|NP_127388.1| - 8.4e-06 25.4 0.6 4.7e-05 23.0 0.4 2.1 1 1 1 2 2 2 1 Histidine biosynthesis protein TMP-TENI PF02581.17 gi|14521911|ref|NP_127388.1| - 8.5e-06 25.2 4.9 2.7e-05 23.6 3.5 2.5 2 1 0 2 2 2 1 Thiamine monophosphate synthase DUF561 PF04481.12 gi|14521911|ref|NP_127388.1| - 1.7e-05 24.1 0.9 6.4e-05 22.2 0.9 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF561) PEP_mutase PF13714.6 gi|14521911|ref|NP_127388.1| - 2.2e-05 24.1 4.5 0.012 15.1 0.2 3.1 2 2 2 4 4 4 2 Phosphoenolpyruvate phosphomutase HMGL-like PF00682.19 gi|14521911|ref|NP_127388.1| - 2.3e-05 24.1 4.1 0.0058 16.2 0.7 2.3 1 1 1 2 2 2 2 HMGL-like IGPS PF00218.21 gi|14521911|ref|NP_127388.1| - 7.9e-05 22.0 1.3 0.00035 19.8 1.3 2.2 1 1 0 1 1 1 1 Indole-3-glycerol phosphate synthase Ribul_P_3_epim PF00834.19 gi|14521911|ref|NP_127388.1| - 0.00019 20.9 1.5 0.00036 20.0 1.5 1.6 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family NanE PF04131.14 gi|14521911|ref|NP_127388.1| - 0.00037 19.8 1.6 0.00092 18.5 1.6 1.7 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.15 gi|14521911|ref|NP_127388.1| - 0.00085 18.8 1.1 0.0013 18.2 1.1 1.4 1 0 0 1 1 1 1 Nitronate monooxygenase AP_endonuc_2 PF01261.24 gi|14521911|ref|NP_127388.1| - 0.0033 16.9 0.5 0.16 11.4 0.4 3.1 2 1 0 2 2 2 1 Xylose isomerase-like TIM barrel Trp_syntA PF00290.20 gi|14521911|ref|NP_127388.1| - 0.0051 15.7 3.4 0.086 11.7 1.6 2.6 2 1 1 3 3 3 1 Tryptophan synthase alpha chain PRAI PF00697.22 gi|14521911|ref|NP_127388.1| - 0.014 15.1 0.8 0.038 13.8 0.8 1.6 1 1 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ADH_zinc_N PF00107.26 gi|14521911|ref|NP_127388.1| - 0.016 15.2 6.2 0.022 14.7 0.9 3.1 2 2 1 3 3 3 0 Zinc-binding dehydrogenase QRPTase_C PF01729.19 gi|14521911|ref|NP_127388.1| - 0.016 15.0 5.5 0.03 14.1 0.6 2.6 2 1 1 3 3 3 0 Quinolinate phosphoribosyl transferase, C-terminal domain Oxidored_nitro PF00148.19 gi|14521911|ref|NP_127388.1| - 0.017 13.9 1.1 0.029 13.1 1.1 1.5 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase RNA_binding PF01877.17 gi|14521911|ref|NP_127388.1| - 0.042 14.1 0.0 0.084 13.1 0.0 1.5 1 0 0 1 1 1 0 RNA binding FMN_dh PF01070.18 gi|14521911|ref|NP_127388.1| - 0.052 12.6 3.2 0.095 11.7 3.2 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase Dus PF01207.17 gi|14521911|ref|NP_127388.1| - 0.069 12.2 3.0 0.045 12.8 0.6 1.8 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) adh_short PF00106.25 gi|14521911|ref|NP_127388.1| - 0.29 10.6 2.9 12 5.3 0.2 3.3 2 2 1 3 3 3 0 short chain dehydrogenase PTPS PF01242.19 gi|14521912|ref|NP_127389.1| - 1.2e-29 102.8 0.3 1.4e-29 102.5 0.3 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Glyco_hydro_53 PF07745.13 gi|14521912|ref|NP_127389.1| - 0.065 12.2 0.4 0.39 9.7 0.1 2.0 1 1 1 2 2 2 0 Glycosyl hydrolase family 53 Ribosomal_S27e PF01667.17 gi|33356824|ref|NP_127390.2| - 2.3e-26 91.3 0.5 2.7e-26 91.1 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 zinc_ribbon_6 PF14599.6 gi|33356824|ref|NP_127390.2| - 0.002 18.1 0.4 0.0026 17.8 0.4 1.2 1 0 0 1 1 1 1 Zinc-ribbon TF_Zn_Ribbon PF08271.12 gi|33356824|ref|NP_127390.2| - 0.0035 16.8 1.0 0.0046 16.5 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding HypA PF01155.19 gi|33356824|ref|NP_127390.2| - 0.0041 17.1 0.1 0.0049 16.9 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-BED PF02892.15 gi|33356824|ref|NP_127390.2| - 0.022 14.8 0.1 0.5 10.4 0.0 2.2 2 0 0 2 2 2 0 BED zinc finger zf-CCHC_6 PF15288.6 gi|33356824|ref|NP_127390.2| - 0.024 14.5 3.0 2.3 8.1 0.0 2.4 2 0 0 2 2 2 0 Zinc knuckle Zn_Tnp_IS91 PF14319.6 gi|33356824|ref|NP_127390.2| - 0.044 13.8 0.2 0.058 13.4 0.2 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn-ribbon_8 PF09723.10 gi|33356824|ref|NP_127390.2| - 0.049 13.8 0.3 0.097 12.8 0.3 1.5 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|33356824|ref|NP_127390.2| - 0.049 13.6 0.8 5.9 6.9 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|33356824|ref|NP_127390.2| - 0.053 13.0 1.0 0.45 10.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Desulfoferrod_N PF06397.12 gi|33356824|ref|NP_127390.2| - 0.11 12.1 2.6 4.3 7.0 0.3 2.6 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-RanBP PF00641.18 gi|33356824|ref|NP_127390.2| - 0.16 11.3 6.1 0.68 9.3 0.3 2.7 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Rubredoxin_2 PF18073.1 gi|33356824|ref|NP_127390.2| - 1.9 8.3 4.6 14 5.5 0.2 2.9 3 0 0 3 3 3 0 Rubredoxin metal binding domain Ribosomal_L44 PF00935.19 gi|14521914|ref|NP_127391.1| - 4.1e-27 94.5 5.1 5.3e-27 94.1 5.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 Ribosomal_L33 PF00471.20 gi|14521914|ref|NP_127391.1| - 0.00046 20.6 3.2 0.0024 18.3 1.2 2.3 2 0 0 2 2 2 1 Ribosomal protein L33 Elf1 PF05129.13 gi|14521914|ref|NP_127391.1| - 0.0041 17.1 0.5 0.31 11.1 0.1 2.1 2 0 0 2 2 2 1 Transcription elongation factor Elf1 like NOB1_Zn_bind PF08772.11 gi|14521914|ref|NP_127391.1| - 0.027 14.6 1.4 0.11 12.7 0.1 2.0 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Nudix_N_2 PF14803.6 gi|14521914|ref|NP_127391.1| - 0.09 12.7 3.1 4.9 7.2 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal HypA PF01155.19 gi|14521914|ref|NP_127391.1| - 0.094 12.7 0.3 0.35 10.9 0.3 1.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Maf PF02545.14 gi|14521915|ref|NP_127392.1| - 4.9e-56 189.1 0.0 5.6e-56 188.9 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein Enolase_C PF00113.22 gi|14521916|ref|NP_127393.1| - 4.9e-134 446.2 0.2 6.4e-134 445.8 0.2 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|14521916|ref|NP_127393.1| - 8.6e-61 203.9 0.1 1.4e-60 203.2 0.1 1.3 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|14521916|ref|NP_127393.1| - 5.5e-12 45.7 0.0 9.2e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|14521916|ref|NP_127393.1| - 0.0016 17.6 0.1 0.006 15.8 0.0 1.9 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus tRNA_Me_trans PF03054.16 gi|14521917|ref|NP_127394.1| - 0.021 13.6 0.0 0.031 13.1 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase Lactamase_B_2 PF12706.7 gi|14521918|ref|NP_127395.1| - 1.7e-24 86.4 0.1 2.2e-24 86.1 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|14521918|ref|NP_127395.1| - 9.1e-06 25.8 0.4 5.2e-05 23.3 0.4 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|14521918|ref|NP_127395.1| - 9.8e-06 25.6 0.0 1.9e-05 24.6 0.0 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF1525 PF07511.11 gi|14521918|ref|NP_127395.1| - 0.009 16.1 0.0 0.016 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1525) DNA_pol_B PF00136.21 gi|14521919|ref|NP_127396.1| - 9.1e-80 268.6 0.0 1.5e-79 267.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|14521919|ref|NP_127396.1| - 4.5e-50 170.7 0.2 2.9e-34 118.7 0.0 2.8 1 1 1 2 2 2 2 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|14521919|ref|NP_127396.1| - 5.6e-09 36.0 0.0 1.1e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 gi|14521919|ref|NP_127396.1| - 3.4e-07 30.4 0.0 1.1e-06 28.7 0.0 1.9 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_2 PF03175.13 gi|14521919|ref|NP_127396.1| - 0.00029 19.8 0.3 0.0016 17.4 0.0 2.3 2 1 0 2 2 2 1 DNA polymerase type B, organellar and viral PurS PF02700.14 gi|14521919|ref|NP_127396.1| - 0.063 13.5 0.8 0.2 11.9 0.8 1.8 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine (FGAM) synthase Glyco_trans_4_2 PF13477.6 gi|14521919|ref|NP_127396.1| - 0.1 12.6 0.0 0.35 10.9 0.0 1.9 1 0 0 1 1 1 0 Glycosyl transferase 4-like DUF257 PF03192.13 gi|14521920|ref|NP_127397.1| - 1.1e-23 84.2 5.1 1.3e-23 83.8 5.1 1.1 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 PIN PF01850.21 gi|14521921|ref|NP_127398.1| - 6e-21 75.2 0.1 7e-21 75.0 0.1 1.1 1 0 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|14521921|ref|NP_127398.1| - 0.045 14.2 0.1 0.065 13.7 0.1 1.4 1 1 0 1 1 1 0 PIN domain PIN_3 PF13470.6 gi|14521921|ref|NP_127398.1| - 0.081 13.7 0.0 0.16 12.8 0.0 1.5 1 1 0 1 1 1 0 PIN domain MazE_antitoxin PF04014.18 gi|33356825|ref|NP_877722.1| - 1.2e-11 44.2 1.0 1.9e-11 43.6 0.6 1.6 1 1 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin B3 PF02362.21 gi|33356825|ref|NP_877722.1| - 0.075 12.9 0.0 0.48 10.3 0.0 1.9 2 0 0 2 2 2 0 B3 DNA binding domain Radical_SAM PF04055.21 gi|14521922|ref|NP_127399.1| - 3.4e-30 105.6 0.0 2.2e-29 103.0 0.0 2.4 1 1 0 1 1 1 1 Radical SAM superfamily Radical_SAM_C PF16199.5 gi|14521922|ref|NP_127399.1| - 1.4e-26 92.3 0.1 3.3e-26 91.1 0.1 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Acetyltransf_1 PF00583.25 gi|14521922|ref|NP_127399.1| - 2.8e-09 37.2 0.2 8.8e-09 35.6 0.2 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|14521922|ref|NP_127399.1| - 1.1e-05 25.4 0.1 2.4e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|14521922|ref|NP_127399.1| - 0.0076 16.7 0.0 0.016 15.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF4083 PF13314.6 gi|14521923|ref|NP_127400.1| - 0.0034 17.3 0.4 0.0084 16.0 0.4 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4083) Filamin PF00630.19 gi|14521923|ref|NP_127400.1| - 0.01 16.7 0.4 0.064 14.1 0.1 2.1 2 1 0 2 2 2 1 Filamin/ABP280 repeat Tudor_3 PF18115.1 gi|14521923|ref|NP_127400.1| - 0.048 13.5 0.0 0.15 11.9 0.0 1.9 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain QRPTase_C PF01729.19 gi|14521924|ref|NP_127401.1| - 3.2e-28 98.6 0.0 4.9e-28 98.0 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 gi|14521924|ref|NP_127401.1| - 2.1e-07 31.3 0.0 6.5e-07 29.8 0.0 1.7 1 1 0 1 1 1 1 Nicotinate phosphoribosyltransferase C-terminal domain QRPTase_N PF02749.16 gi|14521924|ref|NP_127401.1| - 5.1e-05 23.2 0.0 0.00011 22.2 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain NAPRTase_N PF17767.1 gi|14521924|ref|NP_127401.1| - 0.0004 20.8 0.0 0.0076 16.6 0.0 2.2 1 1 1 2 2 2 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NAPRTase PF04095.16 gi|14521924|ref|NP_127401.1| - 0.068 12.8 0.1 0.2 11.2 0.1 1.8 1 1 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) family Fer4_13 PF13370.6 gi|14521925|ref|NP_127402.1| - 4.2e-19 68.8 5.9 4.9e-19 68.6 5.9 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|14521925|ref|NP_127402.1| - 2.2e-15 57.2 4.6 2.9e-15 56.7 4.6 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4 PF00037.27 gi|14521925|ref|NP_127402.1| - 1.5e-05 24.6 3.2 0.0019 17.9 1.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_19 PF06902.11 gi|14521925|ref|NP_127402.1| - 9.9e-05 22.3 1.7 0.00016 21.7 1.7 1.3 1 1 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_10 PF13237.6 gi|14521925|ref|NP_127402.1| - 0.0005 20.1 3.3 0.0015 18.6 3.4 1.6 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|14521925|ref|NP_127402.1| - 0.0044 17.6 8.1 0.017 15.7 2.6 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|14521925|ref|NP_127402.1| - 0.0048 17.0 4.6 0.019 15.1 4.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|14521925|ref|NP_127402.1| - 0.022 14.8 5.5 0.025 14.7 0.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Pyr_redox_2 PF07992.14 gi|14521926|ref|NP_127403.1| - 3e-40 138.3 1.2 4.6e-40 137.7 1.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 gi|14521926|ref|NP_127403.1| - 1.7e-39 134.1 0.4 2.5e-39 133.5 0.4 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_3 PF13738.6 gi|14521926|ref|NP_127403.1| - 1.5e-16 60.5 3.6 1.8e-10 40.6 0.1 3.1 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|14521926|ref|NP_127403.1| - 1.4e-15 57.6 4.7 9e-08 32.6 0.3 3.3 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|14521926|ref|NP_127403.1| - 3.6e-10 39.9 1.5 1.1e-09 38.4 0.0 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|14521926|ref|NP_127403.1| - 2.8e-09 36.6 0.5 0.00056 19.3 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FMO-like PF00743.19 gi|14521926|ref|NP_127403.1| - 1.6e-08 33.4 0.0 2.3e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like GIDA PF01134.22 gi|14521926|ref|NP_127403.1| - 6.7e-08 32.0 2.9 8.6e-05 21.8 0.0 2.7 3 0 0 3 3 3 2 Glucose inhibited division protein A HI0933_like PF03486.14 gi|14521926|ref|NP_127403.1| - 1.1e-07 30.9 5.2 1.7e-06 27.0 0.3 2.6 3 0 0 3 3 3 2 HI0933-like protein 2-Hacid_dh_C PF02826.19 gi|14521926|ref|NP_127403.1| - 1.4e-07 31.0 0.2 0.0084 15.5 0.0 2.5 3 0 0 3 3 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 gi|14521926|ref|NP_127403.1| - 7.8e-07 28.6 0.3 1.1e-05 24.8 0.1 2.2 2 0 0 2 2 2 1 Thi4 family Shikimate_DH PF01488.20 gi|14521926|ref|NP_127403.1| - 1.8e-06 28.1 1.5 0.41 10.7 0.2 3.6 3 0 0 3 3 3 2 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|14521926|ref|NP_127403.1| - 2.2e-06 28.0 1.3 0.023 15.1 0.4 2.7 2 1 0 2 2 2 2 Putative NAD(P)-binding FAD_oxidored PF12831.7 gi|14521926|ref|NP_127403.1| - 6.2e-06 25.8 6.2 0.00083 18.8 0.1 2.5 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|14521926|ref|NP_127403.1| - 7.2e-06 25.3 10.5 2.2e-05 23.7 0.7 3.2 2 1 1 3 3 3 1 FAD binding domain FAD_binding_3 PF01494.19 gi|14521926|ref|NP_127403.1| - 1.8e-05 24.2 0.5 0.00021 20.6 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain Amino_oxidase PF01593.24 gi|14521926|ref|NP_127403.1| - 2.5e-05 23.7 0.6 0.0024 17.2 0.0 3.0 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|14521926|ref|NP_127403.1| - 2.6e-05 24.0 5.9 9.5e-05 22.1 0.5 3.4 3 1 0 4 4 4 1 FAD dependent oxidoreductase PALP PF00291.25 gi|14521926|ref|NP_127403.1| - 6.9e-05 22.4 0.0 0.32 10.4 0.0 2.3 2 0 0 2 2 2 2 Pyridoxal-phosphate dependent enzyme IlvN PF07991.12 gi|14521926|ref|NP_127403.1| - 0.00025 20.7 0.1 0.71 9.4 0.1 2.4 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, NADPH-binding domain F420_oxidored PF03807.17 gi|14521926|ref|NP_127403.1| - 0.00042 20.8 2.5 0.12 12.9 0.8 3.1 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|14521926|ref|NP_127403.1| - 0.0011 19.1 0.1 1.5 8.9 0.0 2.7 2 0 0 2 2 2 2 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XdhC_C PF13478.6 gi|14521926|ref|NP_127403.1| - 0.0012 19.3 0.1 1.2 9.6 0.0 2.6 2 0 0 2 2 2 1 XdhC Rossmann domain 3HCDH_N PF02737.18 gi|14521926|ref|NP_127403.1| - 0.0041 17.0 2.0 0.079 12.8 0.3 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 gi|14521926|ref|NP_127403.1| - 0.0041 16.2 0.2 0.0041 16.2 0.2 1.7 3 0 0 3 3 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|14521926|ref|NP_127403.1| - 0.0059 16.6 2.7 0.019 15.0 0.2 2.5 3 0 0 3 3 2 1 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|14521926|ref|NP_127403.1| - 0.0097 15.5 0.5 0.08 12.5 0.3 2.6 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YjeF_N PF03853.15 gi|14521926|ref|NP_127403.1| - 0.02 14.8 0.0 4.1 7.3 0.0 2.5 2 0 0 2 2 2 0 YjeF-related protein N-terminus TrkA_N PF02254.18 gi|14521926|ref|NP_127403.1| - 0.058 13.7 0.4 3.5 7.9 0.0 2.8 3 0 0 3 3 2 0 TrkA-N domain Oxidored_nitro PF00148.19 gi|14521926|ref|NP_127403.1| - 0.063 12.0 0.4 0.63 8.7 0.1 2.1 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase K_oxygenase PF13434.6 gi|14521926|ref|NP_127403.1| - 0.072 12.2 0.1 21 4.1 0.0 2.9 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) ELFV_dehydrog PF00208.21 gi|14521926|ref|NP_127403.1| - 0.099 12.4 0.1 5 6.8 0.0 2.2 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.16 gi|14521926|ref|NP_127403.1| - 0.15 11.7 0.4 0.62 9.7 0.2 2.1 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Glyco_transf_4 PF13439.6 gi|14521926|ref|NP_127403.1| - 0.17 11.9 0.0 6.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 adh_short PF00106.25 gi|14521926|ref|NP_127403.1| - 0.23 10.9 2.1 2 7.8 0.1 2.2 2 0 0 2 2 2 0 short chain dehydrogenase Fer4_10 PF13237.6 gi|14521926|ref|NP_127403.1| - 0.34 11.0 5.4 0.69 10.1 5.4 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain DHODB_Fe-S_bind PF10418.9 gi|161723318|ref|NP_127404.2| - 1.1e-12 47.6 3.1 1.7e-12 46.9 3.1 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.24 gi|161723318|ref|NP_127404.2| - 0.0093 16.3 0.0 0.018 15.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain PGM_PMM_II PF02879.16 gi|161723318|ref|NP_127404.2| - 0.1 13.2 0.0 0.2 12.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Radical_SAM PF04055.21 gi|14521928|ref|NP_127405.1| - 2.2e-27 96.5 0.3 5.2e-25 88.8 0.1 2.3 2 0 0 2 2 2 2 Radical SAM superfamily UPF0004 PF00919.20 gi|14521928|ref|NP_127405.1| - 3.2e-19 68.8 0.0 6.6e-19 67.8 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|14521928|ref|NP_127405.1| - 6.8e-08 32.4 0.3 2.6e-07 30.5 0.1 2.1 2 0 0 2 2 2 1 TRAM domain DUF2080 PF09853.9 gi|14521928|ref|NP_127405.1| - 0.0078 15.9 0.8 0.52 10.1 0.0 2.7 1 1 1 2 2 2 1 Putative transposon-encoded protein (DUF2080) SnoaL PF07366.12 gi|14521928|ref|NP_127405.1| - 0.086 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase NapD PF03927.13 gi|14521928|ref|NP_127405.1| - 0.15 12.1 0.1 0.42 10.7 0.1 1.8 1 0 0 1 1 1 0 NapD protein RNA_binding PF01877.17 gi|14521929|ref|NP_127406.1| - 2.4e-42 144.0 0.9 3.1e-42 143.6 0.9 1.1 1 0 0 1 1 1 1 RNA binding RNase_P_p30 PF01876.16 gi|14521930|ref|NP_127407.1| - 7.1e-26 91.0 0.0 8.2e-26 90.8 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit p30 SNAP PF14938.6 gi|14521931|ref|NP_127408.1| - 2.7e-11 43.4 9.9 0.00023 20.7 0.4 3.8 2 1 1 4 4 4 3 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 gi|14521931|ref|NP_127408.1| - 0.0018 18.9 8.0 0.22 12.4 0.1 5.6 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|14521931|ref|NP_127408.1| - 0.0021 18.3 15.6 3.7 7.9 0.1 5.7 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|14521931|ref|NP_127408.1| - 0.0026 17.7 22.6 0.14 12.3 0.2 7.2 6 2 2 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|14521931|ref|NP_127408.1| - 0.0035 18.0 6.4 2.5 8.8 0.0 5.2 5 1 0 5 5 5 1 Tetratricopeptide repeat RPN7 PF10602.9 gi|14521931|ref|NP_127408.1| - 0.009 15.7 8.9 2.3 7.9 0.0 4.5 3 2 1 5 5 5 1 26S proteasome subunit RPN7 TPR_11 PF13414.6 gi|14521931|ref|NP_127408.1| - 0.04 13.6 0.4 0.04 13.6 0.4 4.0 4 1 1 5 5 5 0 TPR repeat TPR_5 PF12688.7 gi|14521931|ref|NP_127408.1| - 0.079 13.2 0.0 0.57 10.4 0.0 2.4 2 0 0 2 2 2 0 Tetratrico peptide repeat NSF PF02071.20 gi|14521931|ref|NP_127408.1| - 0.082 13.7 19.5 0.78 10.8 0.1 6.3 7 0 0 7 7 5 0 Aromatic-di-Alanine (AdAR) repeat PARP_reg PF02877.14 gi|14521931|ref|NP_127408.1| - 0.12 12.5 0.5 0.6 10.2 0.2 2.2 2 0 0 2 2 2 0 Poly(ADP-ribose) polymerase, regulatory domain TPR_8 PF13181.6 gi|14521931|ref|NP_127408.1| - 0.15 12.3 0.2 0.15 12.3 0.2 6.1 6 2 3 9 9 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 gi|14521931|ref|NP_127408.1| - 0.22 11.6 8.8 1.2 9.3 0.0 4.5 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|14521931|ref|NP_127408.1| - 0.26 11.2 0.2 0.26 11.2 0.2 5.3 6 1 1 7 7 7 0 Tetratricopeptide repeat Glycos_transf_2 PF00535.26 gi|14521932|ref|NP_127409.1| - 3.5e-09 36.7 0.0 5.5e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|14521932|ref|NP_127409.1| - 0.00057 19.8 0.0 0.001 19.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 YbjQ_1 PF01906.17 gi|14521932|ref|NP_127409.1| - 0.022 15.4 0.0 0.095 13.3 0.0 2.0 2 0 0 2 2 2 0 Putative heavy-metal-binding GFO_IDH_MocA PF01408.22 gi|14521933|ref|NP_127410.1| - 6.8e-30 104.4 1.0 1.1e-29 103.7 1.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|14521933|ref|NP_127410.1| - 2.5e-07 30.7 0.0 4.8e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 gi|14521933|ref|NP_127410.1| - 2.1e-06 28.4 0.7 3.5e-06 27.7 0.7 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|14521933|ref|NP_127410.1| - 0.0046 17.5 0.4 0.011 16.3 0.4 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ox_reductase_C PF08635.10 gi|14521933|ref|NP_127410.1| - 0.015 14.9 0.0 0.044 13.4 0.0 1.8 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain BCL_N PF04714.13 gi|14521933|ref|NP_127410.1| - 0.035 14.1 0.3 0.11 12.5 0.3 1.8 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Oxidoreduct_C PF16490.5 gi|14521933|ref|NP_127410.1| - 0.079 12.6 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain GFO_IDH_MocA PF01408.22 gi|14521934|ref|NP_127411.1| - 3.1e-22 79.7 0.1 4.9e-22 79.0 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|14521934|ref|NP_127411.1| - 4.7e-06 26.6 0.0 1.1e-05 25.4 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 gi|14521934|ref|NP_127411.1| - 0.067 13.9 0.2 0.13 13.0 0.2 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain DAGK_cat PF00781.24 gi|14521934|ref|NP_127411.1| - 0.19 11.4 0.2 7.7 6.1 0.0 2.6 1 1 1 2 2 2 0 Diacylglycerol kinase catalytic domain TIM PF00121.18 gi|14521935|ref|NP_127412.1| - 9.2e-12 44.8 0.1 8e-11 41.8 0.0 1.9 1 1 1 2 2 2 1 Triosephosphate isomerase ThiG PF05690.14 gi|14521935|ref|NP_127412.1| - 3.6e-06 26.5 0.1 3.6e-06 26.5 0.1 1.8 2 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|14521935|ref|NP_127412.1| - 0.00015 20.9 0.1 0.00028 20.0 0.1 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IGPS PF00218.21 gi|14521935|ref|NP_127412.1| - 0.00083 18.6 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase DHO_dh PF01180.21 gi|14521935|ref|NP_127412.1| - 0.02 14.1 0.2 0.03 13.5 0.2 1.2 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase His_biosynth PF00977.21 gi|14521935|ref|NP_127412.1| - 0.023 14.2 0.3 0.085 12.3 0.1 1.9 1 1 0 2 2 2 0 Histidine biosynthesis protein B12-binding PF02310.19 gi|14521935|ref|NP_127412.1| - 0.044 13.8 0.1 0.1 12.6 0.1 1.7 1 0 0 1 1 1 0 B12 binding domain NanE PF04131.14 gi|14521935|ref|NP_127412.1| - 0.11 11.6 2.3 0.082 12.1 0.4 1.8 2 1 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase HAD PF12710.7 gi|14521936|ref|NP_127413.1| - 1.3e-18 68.1 0.0 1.6e-18 67.8 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521936|ref|NP_127413.1| - 9.3e-15 55.5 1.1 5e-13 49.8 1.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|14521936|ref|NP_127413.1| - 3.9e-06 26.8 0.2 4.6e-05 23.3 0.2 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|14521936|ref|NP_127413.1| - 0.0012 19.0 0.1 0.0075 16.4 0.1 2.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|14521936|ref|NP_127413.1| - 0.038 13.1 0.2 0.11 11.6 0.1 1.8 2 0 0 2 2 2 0 Trehalose-phosphatase Put_Phosphatase PF06888.12 gi|14521936|ref|NP_127413.1| - 0.14 11.5 0.0 0.42 10.0 0.0 1.7 2 0 0 2 2 2 0 Putative Phosphatase PCMT PF01135.19 gi|14521937|ref|NP_127414.1| - 1e-68 231.3 0.0 1.1e-68 231.1 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|14521937|ref|NP_127414.1| - 2.4e-11 43.7 0.0 3.4e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|14521937|ref|NP_127414.1| - 1.5e-07 31.4 0.0 2.5e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521937|ref|NP_127414.1| - 8.2e-07 29.6 0.0 1.4e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|14521937|ref|NP_127414.1| - 3e-05 24.6 0.0 0.00012 22.6 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|14521937|ref|NP_127414.1| - 0.0002 20.5 0.0 0.00025 20.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 gi|14521937|ref|NP_127414.1| - 0.00034 20.1 0.0 0.00051 19.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|14521937|ref|NP_127414.1| - 0.0016 18.0 0.0 0.0072 15.9 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Fibrillarin PF01269.17 gi|14521937|ref|NP_127414.1| - 0.0017 17.5 0.0 0.0025 17.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Ubie_methyltran PF01209.18 gi|14521937|ref|NP_127414.1| - 0.0024 17.2 0.0 0.0044 16.4 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.20 gi|14521937|ref|NP_127414.1| - 0.0099 15.2 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_3 PF01596.17 gi|14521937|ref|NP_127414.1| - 0.022 13.9 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Met_10 PF02475.16 gi|14521937|ref|NP_127414.1| - 0.027 14.2 0.0 0.038 13.7 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein GCD14 PF08704.10 gi|14521937|ref|NP_127414.1| - 0.027 14.1 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_4 PF02390.17 gi|14521937|ref|NP_127414.1| - 0.04 13.4 0.0 0.091 12.2 0.0 1.6 2 0 0 2 2 2 0 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 gi|14521937|ref|NP_127414.1| - 0.064 12.2 0.0 0.081 11.9 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_2 PF00891.18 gi|14521937|ref|NP_127414.1| - 0.16 11.2 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain MTS PF05175.14 gi|14521938|ref|NP_127415.1| - 1.6e-14 53.8 0.0 2.2e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 gi|14521938|ref|NP_127415.1| - 1.3e-10 41.2 0.0 1.9e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|14521938|ref|NP_127415.1| - 1.6e-10 40.9 0.0 2e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|14521938|ref|NP_127415.1| - 2e-06 28.4 0.0 8.3e-06 26.4 0.0 2.0 2 1 1 3 3 3 1 Methyltransferase domain Met_10 PF02475.16 gi|14521938|ref|NP_127415.1| - 3.4e-06 26.9 0.1 7.1e-06 25.9 0.1 1.5 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_31 PF13847.6 gi|14521938|ref|NP_127415.1| - 3.4e-06 26.9 0.0 4.3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|14521938|ref|NP_127415.1| - 0.00046 19.3 0.0 0.00053 19.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DNA_methylase PF00145.17 gi|14521938|ref|NP_127415.1| - 0.0024 17.3 0.0 0.0034 16.8 0.0 1.2 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase UPF0020 PF01170.18 gi|14521938|ref|NP_127415.1| - 0.0027 17.4 0.0 0.0042 16.8 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|14521938|ref|NP_127415.1| - 0.0047 17.5 0.0 0.058 14.0 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|14521938|ref|NP_127415.1| - 0.01 15.8 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF43 PF01861.16 gi|14521938|ref|NP_127415.1| - 0.011 15.0 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain Methyltransf_12 PF08242.12 gi|14521938|ref|NP_127415.1| - 0.027 15.2 0.0 0.056 14.2 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 gi|14521938|ref|NP_127415.1| - 0.077 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 DuoxA PF10204.9 gi|14521938|ref|NP_127415.1| - 0.078 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Dual oxidase maturation factor Methyltransf_5 PF01795.19 gi|14521938|ref|NP_127415.1| - 0.096 12.2 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 MraW methylase family Methyltransf_15 PF09445.10 gi|14521938|ref|NP_127415.1| - 0.19 11.3 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|14521938|ref|NP_127415.1| - 0.24 11.4 0.0 0.32 11.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Radical_SAM PF04055.21 gi|14521939|ref|NP_127416.1| - 1.1e-17 64.9 0.2 4.6e-17 62.9 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|14521939|ref|NP_127416.1| - 0.00023 21.2 0.0 0.00068 19.7 0.0 1.8 1 0 0 1 1 1 1 B12 binding domain Carb_kinase PF01256.17 gi|14521940|ref|NP_127417.1| - 1.4e-55 188.4 0.0 4.2e-55 186.9 0.0 1.7 2 0 0 2 2 2 1 Carbohydrate kinase YjeF_N PF03853.15 gi|14521940|ref|NP_127417.1| - 9.3e-36 123.3 0.0 2.5e-35 121.9 0.0 1.6 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|14521940|ref|NP_127417.1| - 4.3e-07 29.6 0.0 7.3e-07 28.8 0.0 1.4 1 1 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|14521940|ref|NP_127417.1| - 0.0016 17.9 0.0 0.0032 16.9 0.0 1.4 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase AIRS_C PF02769.22 gi|14521941|ref|NP_127418.1| - 2e-53 180.7 2.0 4.8e-38 130.7 0.1 2.5 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|14521941|ref|NP_127418.1| - 1.5e-47 160.1 0.2 5.7e-24 84.6 0.0 2.4 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|14521941|ref|NP_127418.1| - 4e-07 30.5 1.1 8.2e-07 29.5 0.1 2.1 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain GATase_5 PF13507.6 gi|14521942|ref|NP_127419.1| - 8.9e-50 169.2 0.0 1.1e-49 168.9 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|14521942|ref|NP_127419.1| - 4.5e-11 42.8 0.0 6.9e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|14521942|ref|NP_127419.1| - 9.7e-10 38.4 0.0 1.7e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|14521942|ref|NP_127419.1| - 8.5e-09 35.4 0.1 1.3e-08 34.9 0.1 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|14521942|ref|NP_127419.1| - 2e-08 34.3 0.0 9.5e-08 32.1 0.0 1.8 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|14521942|ref|NP_127419.1| - 0.00072 19.4 0.0 0.002 17.9 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 DUF4131 PF13567.6 gi|14521942|ref|NP_127419.1| - 0.023 14.4 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) RHS_repeat PF05593.14 gi|14521942|ref|NP_127419.1| - 0.056 14.0 0.0 0.12 12.9 0.0 1.6 1 0 0 1 1 1 0 RHS Repeat PurS PF02700.14 gi|33356827|ref|NP_127420.2| - 8.9e-24 83.5 0.0 1e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GPI PF06560.11 gi|33356828|ref|NP_127421.2| - 7.8e-41 139.3 0.1 9e-41 139.1 0.1 1.0 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|33356828|ref|NP_127421.2| - 8.6e-09 35.0 0.0 1.6e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|33356828|ref|NP_127421.2| - 3.8e-05 23.3 0.0 5.4e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Cupin DMSP_lyase PF16867.5 gi|33356828|ref|NP_127421.2| - 0.0061 16.2 0.0 0.0089 15.7 0.0 1.2 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase FdtA PF05523.11 gi|33356828|ref|NP_127421.2| - 0.064 13.0 0.0 0.31 10.8 0.0 2.1 1 1 2 3 3 3 0 WxcM-like, C-terminal Cupin_3 PF05899.12 gi|33356828|ref|NP_127421.2| - 0.067 12.9 0.5 0.13 12.0 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF861) JmjC PF02373.22 gi|33356828|ref|NP_127421.2| - 0.11 12.9 0.0 0.27 11.7 0.0 1.6 2 0 0 2 2 2 0 JmjC domain, hydroxylase ABC_tran PF00005.27 gi|14521946|ref|NP_127423.1| - 3.7e-31 108.5 0.0 4.8e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14521946|ref|NP_127423.1| - 1.2e-18 67.4 0.1 2.1e-18 66.6 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|14521946|ref|NP_127423.1| - 0.001 19.4 0.2 0.003 17.8 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|14521946|ref|NP_127423.1| - 0.0044 17.5 0.0 0.01 16.3 0.0 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 gi|14521946|ref|NP_127423.1| - 0.0046 16.8 0.3 0.098 12.5 0.0 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|14521946|ref|NP_127423.1| - 0.0048 16.4 0.0 0.017 14.6 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 gi|14521946|ref|NP_127423.1| - 0.0091 15.6 0.0 0.033 13.8 0.0 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Rad17 PF03215.15 gi|14521946|ref|NP_127423.1| - 0.01 15.8 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain PRK PF00485.18 gi|14521946|ref|NP_127423.1| - 0.016 14.9 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 gi|14521946|ref|NP_127423.1| - 0.11 12.2 0.1 0.33 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|14521946|ref|NP_127423.1| - 0.15 11.4 0.1 4 6.7 0.1 2.2 2 0 0 2 2 2 0 KaiC Mg_chelatase PF01078.21 gi|14521946|ref|NP_127423.1| - 0.18 11.2 0.0 0.32 10.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|14521946|ref|NP_127423.1| - 0.18 12.2 0.0 0.34 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_23 PF13476.6 gi|14521946|ref|NP_127423.1| - 0.23 12.0 0.0 0.43 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|14521946|ref|NP_127423.1| - 0.29 9.7 0.0 1 7.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|14521947|ref|NP_127424.1| - 2.2e-28 99.5 0.0 3e-28 99.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|14521947|ref|NP_127424.1| - 9.5e-21 74.1 0.5 1.5e-20 73.5 0.5 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|14521947|ref|NP_127424.1| - 1.6e-05 24.9 0.0 0.0002 21.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|14521947|ref|NP_127424.1| - 0.031 14.2 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|14521947|ref|NP_127424.1| - 0.25 9.9 0.0 0.33 9.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 gi|14521948|ref|NP_127425.1| - 5.6e-28 97.9 14.0 5.6e-28 97.9 14.0 1.8 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|14521948|ref|NP_127425.1| - 2.8e-06 27.2 0.2 2.8e-06 27.2 0.2 3.2 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|14521949|ref|NP_127426.1| - 2e-38 132.0 16.2 2e-38 132.0 16.2 2.2 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3135 PF11333.8 gi|14521949|ref|NP_127426.1| - 0.046 14.0 0.1 0.086 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF3679 PF12438.8 gi|14521949|ref|NP_127426.1| - 0.83 9.4 4.0 0.91 9.3 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3679) SBP_bac_5 PF00496.22 gi|14521950|ref|NP_127427.1| - 2.6e-22 79.3 9.0 7.2e-15 54.8 0.2 2.6 2 1 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle FlgD_ig PF13860.6 gi|14521950|ref|NP_127427.1| - 0.00018 21.3 0.2 0.00052 19.8 0.2 1.7 1 0 0 1 1 1 1 FlgD Ig-like domain VERL PF11386.8 gi|14521950|ref|NP_127427.1| - 0.056 13.6 0.2 0.3 11.3 0.1 2.2 1 1 0 2 2 2 0 Vitelline envelope receptor for lysin Cpn10 PF00166.21 gi|14521950|ref|NP_127427.1| - 0.18 11.9 0.2 0.56 10.3 0.0 1.9 2 0 0 2 2 2 0 Chaperonin 10 Kd subunit Glyco_hydro2_C5 PF18565.1 gi|14521950|ref|NP_127427.1| - 0.19 11.6 0.0 0.42 10.5 0.0 1.6 1 0 0 1 1 1 0 Glycoside hydrolase family 2 C-terminal domain 5 DctP PF03480.13 gi|14521950|ref|NP_127427.1| - 0.5 9.7 2.3 1.5 8.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein, family 7 Amidohydro_1 PF01979.20 gi|14521951|ref|NP_127428.1| - 5.3e-26 91.7 0.2 1.1e-14 54.6 0.1 2.1 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|14521951|ref|NP_127428.1| - 2.4e-07 30.6 0.5 0.003 17.1 0.0 2.5 2 1 1 3 3 3 2 Amidohydrolase family DHOase PF12890.7 gi|14521951|ref|NP_127428.1| - 0.0026 17.7 0.0 0.0069 16.3 0.0 1.7 2 0 0 2 2 2 1 Dihydro-orotase-like TatD_DNase PF01026.21 gi|14521951|ref|NP_127428.1| - 0.0069 15.8 0.4 0.037 13.4 0.4 1.9 1 1 0 1 1 1 1 TatD related DNase DUF2173 PF09941.9 gi|14521951|ref|NP_127428.1| - 0.065 13.5 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2173) DHODB_Fe-S_bind PF10418.9 gi|14521952|ref|NP_127429.1| - 2.1e-11 43.4 2.2 4.4e-11 42.4 2.2 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.24 gi|14521952|ref|NP_127429.1| - 0.00031 21.0 0.0 0.0014 18.9 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 gi|14521952|ref|NP_127429.1| - 0.00042 20.9 0.0 0.002 18.7 0.0 2.0 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 gi|14521952|ref|NP_127429.1| - 0.0035 17.5 0.0 0.14 12.2 0.0 2.3 2 0 0 2 2 2 1 Ferric reductase NAD binding domain Fer2_3 PF13085.6 gi|14521952|ref|NP_127429.1| - 0.12 12.3 0.2 0.22 11.5 0.2 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Radical_SAM PF04055.21 gi|14521953|ref|NP_127430.1| - 4.4e-15 56.4 3.2 4.4e-15 56.4 3.2 3.3 2 1 1 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|14521953|ref|NP_127430.1| - 0.00025 21.2 0.8 0.024 14.7 0.8 2.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain PglZ PF08665.12 gi|14521953|ref|NP_127430.1| - 0.022 14.9 0.1 0.1 12.7 0.0 1.9 2 0 0 2 2 2 0 PglZ domain Acetyltransf_11 PF13720.6 gi|14521953|ref|NP_127430.1| - 0.068 13.6 0.1 0.33 11.5 0.0 2.2 3 0 0 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Fer4_12 PF13353.6 gi|14521953|ref|NP_127430.1| - 0.43 10.8 1.7 36 4.6 1.0 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain QueC PF06508.13 gi|14521954|ref|NP_127431.1| - 8e-10 38.6 0.0 1.2e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|14521954|ref|NP_127431.1| - 3.5e-08 33.4 0.1 7e-08 32.4 0.0 1.5 2 0 0 2 2 2 1 PP-loop family tRNA_Me_trans PF03054.16 gi|14521954|ref|NP_127431.1| - 1.2e-06 27.6 0.0 2.1e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase ThiI PF02568.14 gi|14521954|ref|NP_127431.1| - 2e-06 27.5 0.1 3.6e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.19 gi|14521954|ref|NP_127431.1| - 7.1e-06 26.2 0.0 9.4e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family NAD_synthase PF02540.17 gi|14521954|ref|NP_127431.1| - 3.8e-05 22.9 0.0 5.2e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 NAD synthase Diphthami_syn_2 PF01902.17 gi|14521954|ref|NP_127431.1| - 0.00047 19.7 0.1 0.00079 19.0 0.1 1.4 1 0 0 1 1 1 1 Diphthamide synthase Arginosuc_synth PF00764.19 gi|14521954|ref|NP_127431.1| - 0.0011 18.4 0.1 0.0014 18.0 0.1 1.1 1 0 0 1 1 1 1 Arginosuccinate synthase zf-RRPl_C4 PF17026.5 gi|14521954|ref|NP_127431.1| - 0.057 13.5 1.2 3.1 7.9 0.2 2.3 2 0 0 2 2 2 0 Putative ribonucleoprotein zinc-finger pf C4 type DEK_C PF08766.11 gi|14521954|ref|NP_127431.1| - 0.12 12.3 0.2 0.68 9.9 0.2 2.2 2 0 0 2 2 2 0 DEK C terminal domain zf-C4_ClpX PF06689.13 gi|14521954|ref|NP_127431.1| - 2.5 8.1 6.0 1.1 9.1 2.8 2.0 2 0 0 2 2 2 0 ClpX C4-type zinc finger DHHA1 PF02272.19 gi|14521955|ref|NP_127432.1| - 1.6e-14 54.5 0.5 3.6e-14 53.3 0.5 1.6 1 0 0 1 1 1 1 DHHA1 domain tRNA-synt_2c PF01411.19 gi|14521955|ref|NP_127432.1| - 2.6e-12 46.1 0.0 4.1e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|14521955|ref|NP_127432.1| - 1.4e-11 44.3 0.5 2.7e-11 43.4 0.5 1.5 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain UPF0184 PF03670.13 gi|14521955|ref|NP_127432.1| - 0.15 12.5 0.0 0.46 10.9 0.0 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0184) Uds1 PF15456.6 gi|14521955|ref|NP_127432.1| - 0.18 11.9 0.1 2.6 8.2 0.1 2.3 2 0 0 2 2 2 0 Up-regulated During Septation MCPsignal PF00015.21 gi|14521956|ref|NP_127433.1| - 8.2e-29 100.6 10.3 1.2e-28 100.0 9.0 1.8 1 1 1 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain PhoU_div PF01865.16 gi|14521956|ref|NP_127433.1| - 0.0011 18.4 7.8 0.014 14.7 0.6 2.3 2 0 0 2 2 2 2 Protein of unknown function DUF47 TetR PF13972.6 gi|14521956|ref|NP_127433.1| - 0.0085 15.8 1.4 0.091 12.5 0.1 2.6 1 1 1 3 3 3 1 Bacterial transcriptional repressor Baculo_PEP_C PF04513.12 gi|14521956|ref|NP_127433.1| - 0.0093 16.0 9.3 1.4 9.0 0.8 3.3 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus Mce4_CUP1 PF11887.8 gi|14521956|ref|NP_127433.1| - 0.024 14.1 0.8 1 8.7 0.1 2.3 1 1 1 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative RecU PF03838.14 gi|14521956|ref|NP_127433.1| - 0.046 13.7 0.1 0.13 12.2 0.0 1.8 2 0 0 2 2 2 0 Recombination protein U DASH_Dam1 PF08653.10 gi|14521956|ref|NP_127433.1| - 0.074 12.9 12.3 3.7 7.4 0.1 5.0 3 3 2 5 5 5 0 DASH complex subunit Dam1 Goodbye PF17109.5 gi|14521956|ref|NP_127433.1| - 0.085 13.3 2.7 0.39 11.2 0.2 2.8 1 1 1 3 3 3 0 fungal STAND N-terminal Goodbye domain BAG6 PF12057.8 gi|14521956|ref|NP_127433.1| - 0.12 12.0 0.6 1 9.1 0.1 2.3 2 0 0 2 2 2 0 BCL2-associated athanogene 6 BLOC1_2 PF10046.9 gi|14521956|ref|NP_127433.1| - 0.15 12.3 9.8 0.3 11.4 0.7 3.4 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Utp8 PF10395.9 gi|14521956|ref|NP_127433.1| - 0.16 10.4 7.7 0.014 14.0 3.1 1.5 2 0 0 2 2 2 0 Utp8 family ALIX_LYPXL_bnd PF13949.6 gi|14521956|ref|NP_127433.1| - 0.17 11.2 10.9 1.1 8.5 2.6 2.4 1 1 0 2 2 2 0 ALIX V-shaped domain binding to HIV COG2 PF06148.11 gi|14521956|ref|NP_127433.1| - 0.17 12.0 5.3 0.85 9.7 0.8 2.9 2 2 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Vps51 PF08700.11 gi|14521956|ref|NP_127433.1| - 0.19 11.8 4.9 6.9 6.8 0.3 3.3 3 1 0 3 3 3 0 Vps51/Vps67 Sec34 PF04136.15 gi|14521956|ref|NP_127433.1| - 0.32 10.9 5.6 2.4 8.0 0.4 3.1 2 2 1 3 3 3 0 Sec34-like family RPW8 PF05659.11 gi|14521956|ref|NP_127433.1| - 0.39 10.4 7.2 5.3 6.7 0.4 3.1 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF5101 PF17031.5 gi|14521956|ref|NP_127433.1| - 0.68 10.1 4.5 1.1 9.4 0.1 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF5101) DASH_Dad2 PF08654.10 gi|14521956|ref|NP_127433.1| - 0.68 10.4 5.3 10 6.6 0.2 3.2 2 2 1 3 3 3 0 DASH complex subunit Dad2 DUF2935 PF11155.8 gi|14521956|ref|NP_127433.1| - 0.7 10.2 5.3 1.8 8.9 2.9 2.7 1 1 0 2 2 2 0 Domain of unknown function (DUF2935) COMM_domain PF07258.14 gi|14521956|ref|NP_127433.1| - 1 9.6 4.2 1.2 9.3 0.2 3.0 3 1 1 4 4 3 0 COMM domain Tweety PF04906.13 gi|14521956|ref|NP_127433.1| - 1.1 7.8 5.5 0.8 8.3 0.9 2.0 2 0 0 2 2 2 0 Tweety EF-G-binding_N PF07299.11 gi|14521956|ref|NP_127433.1| - 1.4 9.5 6.8 2.8 8.5 0.2 3.0 3 0 0 3 3 3 0 Elongation factor G-binding protein, N-terminal WXG100 PF06013.12 gi|14521956|ref|NP_127433.1| - 1.6 9.0 6.0 33 4.8 0.1 4.1 3 1 0 4 4 4 0 Proteins of 100 residues with WXG DUF3510 PF12022.8 gi|14521956|ref|NP_127433.1| - 2.2 8.7 4.7 4.7 7.6 0.2 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF3510) Fungal_TACC PF12709.7 gi|14521956|ref|NP_127433.1| - 2.3 8.7 6.8 30 5.2 0.0 3.9 3 2 0 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins DASH_Dad4 PF08650.10 gi|14521956|ref|NP_127433.1| - 2.9 7.9 7.7 7.4 6.6 0.2 4.3 3 2 1 5 5 5 0 DASH complex subunit Dad4 YojJ PF10372.9 gi|14521956|ref|NP_127433.1| - 4.6 7.4 7.2 37 4.5 0.2 3.8 3 1 1 4 4 4 0 Bacterial membrane-spanning protein N-terminus Laminin_II PF06009.12 gi|14521956|ref|NP_127433.1| - 7.4 6.6 9.8 3.4 7.7 1.3 3.0 1 1 1 2 2 2 0 Laminin Domain II Lactamase_B PF00753.27 gi|14521957|ref|NP_127434.1| - 3.1e-22 79.6 0.2 3.7e-22 79.3 0.2 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|14521957|ref|NP_127434.1| - 0.0043 16.9 0.0 0.0063 16.4 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain ATP-synt_D PF01813.17 gi|14521958|ref|NP_127435.1| - 8.3e-62 208.5 15.0 9.4e-62 208.3 15.0 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF16 PF01519.16 gi|14521958|ref|NP_127435.1| - 0.023 15.2 2.8 0.067 13.7 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function DUF16 DNA_primase_lrg PF04104.14 gi|14521958|ref|NP_127435.1| - 0.15 11.5 2.2 0.22 10.9 0.4 2.0 2 0 0 2 2 2 0 Eukaryotic and archaeal DNA primase, large subunit CENP-F_leu_zip PF10473.9 gi|14521958|ref|NP_127435.1| - 0.44 10.6 13.2 0.72 9.9 2.3 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 gi|14521958|ref|NP_127435.1| - 0.55 10.4 13.3 13 6.0 0.2 3.3 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 Tnp_22_trimer PF17489.2 gi|14521958|ref|NP_127435.1| - 1.7 8.7 8.3 7.9 6.5 0.4 3.3 3 0 0 3 3 3 0 L1 transposable element trimerization domain ATP-synt_ab PF00006.25 gi|14521959|ref|NP_127436.1| - 6e-68 228.7 0.0 7.9e-68 228.3 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|14521959|ref|NP_127436.1| - 1.5e-13 51.0 1.9 1.5e-13 51.0 1.9 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|14521959|ref|NP_127436.1| - 6.3e-06 26.3 2.4 8.2e-06 25.9 0.8 2.1 2 0 0 2 2 2 1 HAS barrel domain ATP-synt_ab PF00006.25 gi|14521960|ref|NP_127437.1| - 5.9e-88 294.1 0.0 1.3e-80 270.0 0.0 2.2 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|14521960|ref|NP_127437.1| - 3.7e-51 172.1 0.6 9.4e-51 170.8 0.6 1.8 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension LAGLIDADG_3 PF14528.6 gi|14521960|ref|NP_127437.1| - 4.9e-20 71.6 1.9 2.1e-13 50.4 0.2 2.5 2 0 0 2 2 2 2 LAGLIDADG-like domain Intein_splicing PF14890.6 gi|14521960|ref|NP_127437.1| - 3.2e-18 66.0 0.7 7.1e-18 64.9 0.7 1.6 1 0 0 1 1 1 1 Intein splicing domain ATP-synt_ab_N PF02874.23 gi|14521960|ref|NP_127437.1| - 2.3e-14 53.7 5.9 5.4e-14 52.5 4.5 2.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain Hint PF01079.20 gi|14521960|ref|NP_127437.1| - 0.00031 20.3 0.2 0.00094 18.7 0.0 1.8 2 0 0 2 2 2 1 Hint module DUF2691 PF10903.8 gi|14521960|ref|NP_127437.1| - 0.072 13.0 0.1 0.25 11.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2691) ATP-synt_F PF01990.17 gi|14521961|ref|NP_127438.1| - 1.5e-19 70.1 0.1 2e-19 69.7 0.1 1.2 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.16 gi|14521962|ref|NP_127439.1| - 7.2e-71 239.4 10.6 8.3e-71 239.2 10.6 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.18 gi|14521963|ref|NP_127440.1| - 1.5e-38 132.3 19.6 1.7e-38 132.0 19.6 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit DUF87 PF01935.17 gi|14521963|ref|NP_127440.1| - 0.0051 16.9 7.0 0.044 13.9 0.4 2.1 1 1 1 2 2 2 2 Helicase HerA, central domain ATP-synt_B PF00430.18 gi|14521963|ref|NP_127440.1| - 0.013 15.6 25.7 0.12 12.4 12.3 2.9 1 1 2 3 3 3 0 ATP synthase B/B' CF(0) HrpE PF06188.12 gi|14521963|ref|NP_127440.1| - 0.036 13.9 6.5 0.051 13.5 6.5 1.2 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E Lipoprotein_2 PF00921.17 gi|14521963|ref|NP_127440.1| - 0.041 13.4 0.1 0.041 13.4 0.1 2.2 1 1 0 2 2 2 0 Borrelia lipoprotein Exonuc_VII_L PF02601.15 gi|14521963|ref|NP_127440.1| - 0.082 12.5 3.3 0.1 12.1 3.3 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3552 PF12072.8 gi|14521963|ref|NP_127440.1| - 0.13 11.7 27.5 2.6 7.4 6.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Spc7 PF08317.11 gi|14521963|ref|NP_127440.1| - 0.16 10.9 12.4 0.29 10.0 12.1 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein PHA_gran_rgn PF09650.10 gi|14521963|ref|NP_127440.1| - 0.23 11.8 6.2 4.8 7.5 4.5 2.8 2 1 0 2 2 2 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) KxDL PF10241.9 gi|14521963|ref|NP_127440.1| - 0.81 10.0 7.0 3.1 8.1 1.5 3.0 1 1 2 3 3 3 0 Uncharacterized conserved protein YtxH PF12732.7 gi|14521963|ref|NP_127440.1| - 1 9.9 8.7 3.5 8.2 2.8 2.7 2 1 0 2 2 2 0 YtxH-like protein FtsA PF14450.6 gi|14521963|ref|NP_127440.1| - 1.4 9.4 4.3 3.4 8.2 4.2 1.8 1 1 0 1 1 1 0 Cell division protein FtsA DivIVA PF05103.13 gi|14521963|ref|NP_127440.1| - 3.6 7.7 20.3 0.28 11.3 9.6 2.9 1 1 2 3 3 3 0 DivIVA protein Glyco_trans_1_2 PF13524.6 gi|14521963|ref|NP_127440.1| - 6.7 7.2 8.1 2.4 8.6 4.4 2.2 1 1 0 1 1 1 0 Glycosyl transferases group 1 Mitofilin PF09731.9 gi|14521963|ref|NP_127440.1| - 7.4 5.3 19.0 9.1 5.0 19.0 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ATP-synt_C PF00137.21 gi|14521964|ref|NP_127441.1| - 4.8e-26 90.9 25.5 7.9e-16 58.1 8.7 2.4 3 0 0 3 3 3 2 ATP synthase subunit C YbgS PF13985.6 gi|14521964|ref|NP_127441.1| - 0.55 10.5 3.1 0.82 10.0 3.1 1.3 1 0 0 1 1 1 0 YbgS-like protein V_ATPase_I PF01496.19 gi|14521965|ref|NP_127442.1| - 5.1e-34 117.4 6.4 1.5e-20 72.8 0.0 3.0 3 1 0 3 3 3 2 V-type ATPase 116kDa subunit family Baculo_PEP_C PF04513.12 gi|14521965|ref|NP_127442.1| - 0.059 13.4 0.2 0.15 12.1 0.2 1.7 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus SPATA6 PF14909.6 gi|14521965|ref|NP_127442.1| - 0.079 13.1 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Spermatogenesis-assoc protein 6 Tektin PF03148.14 gi|14521965|ref|NP_127442.1| - 0.47 9.1 1.5 0.69 8.6 1.5 1.1 1 0 0 1 1 1 0 Tektin family bZIP_2 PF07716.15 gi|14521965|ref|NP_127442.1| - 2.1 8.5 4.9 2.7 8.1 0.2 2.6 2 0 0 2 2 2 0 Basic region leucine zipper Prefoldin_2 PF01920.20 gi|14521965|ref|NP_127442.1| - 5.2 7.1 6.2 1.2 9.2 0.3 2.5 2 1 0 3 3 3 0 Prefoldin subunit APG6_N PF17675.1 gi|14521965|ref|NP_127442.1| - 9.3 6.8 7.1 0.39 11.3 0.2 2.2 3 0 0 3 3 3 0 Apg6 coiled-coil region V-ATPase_G_2 PF16999.5 gi|14521966|ref|NP_127443.1| - 2.8e-05 24.5 26.1 5.7e-05 23.5 26.1 1.5 1 1 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|14521966|ref|NP_127443.1| - 2.9e-05 24.2 24.5 4.6e-05 23.5 24.2 1.5 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) DivIVA PF05103.13 gi|14521966|ref|NP_127443.1| - 0.00027 21.0 19.7 0.0074 16.4 13.0 2.0 1 1 1 2 2 2 2 DivIVA protein HrpE PF06188.12 gi|14521966|ref|NP_127443.1| - 0.027 14.4 5.0 0.032 14.1 5.0 1.1 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E V-ATPase_G PF03179.15 gi|14521966|ref|NP_127443.1| - 0.033 14.7 27.5 0.18 12.3 27.5 2.0 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF883 PF05957.13 gi|14521966|ref|NP_127443.1| - 0.13 12.9 14.1 0.98 10.1 4.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Telomere_reg-2 PF10193.9 gi|14521966|ref|NP_127443.1| - 0.22 12.0 9.4 3 8.3 2.1 3.0 2 1 1 3 3 3 0 Telomere length regulation protein LMBR1 PF04791.16 gi|14521966|ref|NP_127443.1| - 0.23 10.3 9.1 0.27 10.1 9.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3552 PF12072.8 gi|14521966|ref|NP_127443.1| - 0.32 10.4 24.8 1 8.8 21.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Spectrin_like PF18373.1 gi|14521966|ref|NP_127443.1| - 0.55 10.3 4.4 1.6 8.8 0.1 2.6 1 1 2 3 3 3 0 Spectrin like domain MIEAP PF16026.5 gi|14521966|ref|NP_127443.1| - 0.66 10.2 5.4 0.77 9.9 5.4 1.1 1 0 0 1 1 1 0 Mitochondria-eating protein RRF PF01765.19 gi|14521966|ref|NP_127443.1| - 0.73 9.8 15.2 0.91 9.5 15.2 1.2 1 0 0 1 1 1 0 Ribosome recycling factor OmpH PF03938.14 gi|14521966|ref|NP_127443.1| - 1.1 9.6 14.0 1.4 9.3 14.0 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Mitofilin PF09731.9 gi|14521966|ref|NP_127443.1| - 1.4 7.7 20.7 1.5 7.6 20.7 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Cyclin_C_2 PF16899.5 gi|14521966|ref|NP_127443.1| - 1.9 8.9 4.9 3.7 8.0 0.2 2.3 1 1 1 2 2 2 0 Cyclin C-terminal domain vATP-synt_E PF01991.18 gi|14521966|ref|NP_127443.1| - 1.9 7.8 28.4 0.7 9.3 4.8 2.2 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit YqaH PF17448.2 gi|14521966|ref|NP_127443.1| - 2.5 8.5 7.4 0.55 10.6 0.9 2.4 1 1 1 3 3 3 0 Uncharacterized YqaH-like NARP1 PF12569.8 gi|14521966|ref|NP_127443.1| - 2.5 6.9 12.5 2.8 6.7 12.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Cas_CT1975 PF09344.10 gi|14521966|ref|NP_127443.1| - 5.3 6.4 9.4 6.2 6.2 9.4 1.0 1 0 0 1 1 1 0 CT1975-like protein POTRA_TamA_1 PF17243.2 gi|14521966|ref|NP_127443.1| - 8 6.6 8.1 5.7 7.1 1.6 2.4 1 1 1 2 2 2 0 POTRA domain TamA domain 1 DUF4972 PF16342.5 gi|14521966|ref|NP_127443.1| - 9.7 5.9 12.0 1.2 8.9 5.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4972) RNase_J_C PF17770.1 gi|14521966|ref|NP_127443.1| - 9.8 7.3 11.5 28 5.8 6.9 2.3 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain TrkA_N PF02254.18 gi|14521967|ref|NP_127444.1| - 3.4e-29 101.5 0.8 5.9e-29 100.7 0.8 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|14521967|ref|NP_127444.1| - 6.7e-14 51.5 0.1 1.9e-13 50.0 0.0 1.8 2 0 0 2 2 1 1 TrkA-C domain ApbA PF02558.16 gi|14521967|ref|NP_127444.1| - 7.5e-07 28.9 0.1 1.2e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 gi|14521967|ref|NP_127444.1| - 3.6e-05 23.4 0.2 0.0013 18.4 0.1 2.2 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NmrA PF05368.13 gi|14521967|ref|NP_127444.1| - 0.0001 21.9 0.0 0.00017 21.3 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family Shikimate_DH PF01488.20 gi|14521967|ref|NP_127444.1| - 0.00021 21.4 0.7 0.00045 20.3 0.4 1.7 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_10 PF13460.6 gi|14521967|ref|NP_127444.1| - 0.00034 20.6 0.1 0.00047 20.1 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 gi|14521967|ref|NP_127444.1| - 0.00042 20.6 0.2 0.00077 19.7 0.2 1.5 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 gi|14521967|ref|NP_127444.1| - 0.0005 20.1 0.1 0.002 18.1 0.0 1.9 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|14521967|ref|NP_127444.1| - 0.00054 20.5 0.2 0.0013 19.3 0.2 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|14521967|ref|NP_127444.1| - 0.0016 18.4 0.8 0.0023 17.9 0.1 1.7 2 0 0 2 2 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAO PF01266.24 gi|14521967|ref|NP_127444.1| - 0.003 17.2 0.1 0.0059 16.2 0.1 1.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|14521967|ref|NP_127444.1| - 0.0047 16.2 0.2 0.007 15.7 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Gp_dh_N PF00044.24 gi|14521967|ref|NP_127444.1| - 0.0063 16.8 0.5 0.014 15.8 0.4 1.7 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|14521967|ref|NP_127444.1| - 0.0063 15.9 0.1 0.0092 15.4 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 gi|14521967|ref|NP_127444.1| - 0.0065 16.0 0.2 0.016 14.7 0.2 1.7 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Pyr_redox PF00070.27 gi|14521967|ref|NP_127444.1| - 0.0084 16.7 0.2 0.021 15.3 0.2 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|14521967|ref|NP_127444.1| - 0.023 15.2 0.0 0.035 14.6 0.0 1.3 1 0 0 1 1 1 0 XdhC Rossmann domain Epimerase PF01370.21 gi|14521967|ref|NP_127444.1| - 0.023 14.2 0.1 0.032 13.7 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family LpxI_N PF17930.1 gi|14521967|ref|NP_127444.1| - 0.024 14.5 0.1 0.062 13.2 0.1 1.8 1 1 1 2 2 2 0 LpxI N-terminal domain NAD_binding_2 PF03446.15 gi|14521967|ref|NP_127444.1| - 0.025 14.7 0.4 0.14 12.4 0.2 2.1 2 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase adh_short PF00106.25 gi|14521967|ref|NP_127444.1| - 0.026 14.0 0.2 0.045 13.2 0.2 1.4 1 0 0 1 1 1 0 short chain dehydrogenase FAD_binding_3 PF01494.19 gi|14521967|ref|NP_127444.1| - 0.059 12.6 0.1 0.09 12.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain PglD_N PF17836.1 gi|14521967|ref|NP_127444.1| - 0.06 14.0 0.6 0.23 12.1 0.1 2.2 2 0 0 2 2 2 0 PglD N-terminal domain Thi4 PF01946.17 gi|14521967|ref|NP_127444.1| - 0.076 12.2 0.3 0.15 11.3 0.3 1.4 1 1 0 1 1 1 0 Thi4 family Rossmann-like PF10727.9 gi|14521967|ref|NP_127444.1| - 0.12 12.3 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 Rossmann-like domain SecD_SecF PF02355.16 gi|14521968|ref|NP_127445.1| - 4.8e-17 62.0 6.6 9.5e-17 61.0 6.6 1.4 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|14521968|ref|NP_127445.1| - 5.1e-08 32.2 0.1 1.1e-07 31.1 0.1 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif MMPL PF03176.15 gi|14521968|ref|NP_127445.1| - 0.051 12.5 11.7 0.093 11.6 11.7 1.4 1 0 0 1 1 1 0 MMPL family Patched PF02460.18 gi|14521968|ref|NP_127445.1| - 7.4 4.5 10.6 11 3.9 10.6 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.16 gi|14521969|ref|NP_127446.1| - 1.5e-32 112.5 11.1 2.6e-32 111.8 11.1 1.3 1 0 0 1 1 1 1 Protein export membrane protein Patched PF02460.18 gi|14521969|ref|NP_127446.1| - 1.2e-05 23.7 5.5 1.5e-05 23.3 5.5 1.1 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 gi|14521969|ref|NP_127446.1| - 7.5e-05 21.8 5.9 0.00011 21.2 5.9 1.2 1 0 0 1 1 1 1 MMPL family Ac76 PF05814.11 gi|14521969|ref|NP_127446.1| - 0.4 10.7 0.0 0.4 10.7 0.0 2.6 2 1 0 2 2 2 0 Orf76 (Ac76) Peptidase_M22 PF00814.25 gi|14521970|ref|NP_127447.1| - 6.7e-97 324.4 0.0 7.7e-97 324.2 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 gi|14521970|ref|NP_127447.1| - 0.0002 21.2 0.0 0.17 11.5 0.0 2.2 2 0 0 2 2 2 2 Carbamoyltransferase N-terminus BcrAD_BadFG PF01869.20 gi|14521970|ref|NP_127447.1| - 0.12 11.9 0.1 0.72 9.3 0.1 2.0 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family DUF835 PF05763.12 gi|14521971|ref|NP_127448.1| - 5.6e-35 120.0 0.0 8.7e-35 119.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF835) Pox_A14 PF05767.12 gi|14521971|ref|NP_127448.1| - 7.4 6.8 10.7 1.7 8.8 0.1 3.2 2 1 1 3 3 3 0 Poxvirus virion envelope protein A14 LPG_synthase_TM PF03706.13 gi|14521972|ref|NP_127449.1| - 4.8e-58 197.1 31.4 5.8e-58 196.8 31.4 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Methyltr_RsmB-F PF01189.17 gi|14521973|ref|NP_127450.1| - 5.6e-59 199.2 0.0 7.5e-59 198.7 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F PUA PF01472.20 gi|14521973|ref|NP_127450.1| - 5.5e-17 61.5 0.2 1.2e-16 60.4 0.2 1.5 1 0 0 1 1 1 1 PUA domain Methyltransf_31 PF13847.6 gi|14521973|ref|NP_127450.1| - 9.3e-13 48.2 0.0 1.4e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|14521973|ref|NP_127450.1| - 4e-07 30.7 0.0 8e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|14521973|ref|NP_127450.1| - 2.8e-06 26.8 0.0 5.4e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltr_RsmF_N PF17125.5 gi|14521973|ref|NP_127450.1| - 2.8e-06 27.7 0.2 3.1e-05 24.4 0.1 2.3 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF PCMT PF01135.19 gi|14521973|ref|NP_127450.1| - 7.5e-05 22.6 0.0 0.00019 21.3 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|14521973|ref|NP_127450.1| - 0.00074 19.7 0.0 0.0017 18.5 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_15 PF09445.10 gi|14521973|ref|NP_127450.1| - 0.00089 18.9 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_4 PF02390.17 gi|14521973|ref|NP_127450.1| - 0.0012 18.4 0.1 0.014 14.8 0.0 2.1 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|14521973|ref|NP_127450.1| - 0.014 16.0 0.0 0.038 14.6 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain N6_Mtase PF02384.16 gi|14521973|ref|NP_127450.1| - 0.037 13.3 0.0 0.093 12.0 0.0 1.8 1 1 0 1 1 1 0 N-6 DNA Methylase MCD_N PF17408.2 gi|14521973|ref|NP_127450.1| - 0.043 14.0 0.1 0.11 12.6 0.1 1.6 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain UPF0020 PF01170.18 gi|14521973|ref|NP_127450.1| - 0.049 13.3 0.0 0.067 12.9 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 HTH_12 PF08461.10 gi|14521973|ref|NP_127450.1| - 0.056 13.4 0.6 0.18 11.7 0.1 2.0 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain UPF0113 PF03657.13 gi|14521973|ref|NP_127450.1| - 0.11 12.8 0.0 0.24 11.7 0.0 1.6 1 0 0 1 1 1 0 UPF0113 PUA domain DUF1967 PF09269.11 gi|14521973|ref|NP_127450.1| - 1.1 9.3 4.1 4.2 7.4 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1967) AdoMet_dc PF02675.15 gi|14521974|ref|NP_127451.1| - 2.6e-38 130.5 0.0 3.3e-38 130.2 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase DUF2334 PF10096.9 gi|14521975|ref|NP_127452.1| - 3.5e-27 95.4 0.1 4.2e-27 95.2 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_deac_1 PF01522.21 gi|14521975|ref|NP_127452.1| - 2.1e-05 24.4 0.0 2.8e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2194 PF09960.9 gi|14521975|ref|NP_127452.1| - 0.0068 14.8 0.1 0.0091 14.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein conserved in bacteria (DUF2194) DpaA_N PF16924.5 gi|14521975|ref|NP_127452.1| - 0.086 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain GDC-P PF02347.16 gi|14521976|ref|NP_127453.1| - 9.3e-14 51.1 0.0 9.9e-11 41.1 0.0 2.1 2 0 0 2 2 2 2 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|14521976|ref|NP_127453.1| - 6.3e-09 35.3 0.0 1.4e-08 34.2 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|14521976|ref|NP_127453.1| - 2.7e-05 23.6 0.0 4.1e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|14521976|ref|NP_127453.1| - 3.7e-05 23.1 0.0 6e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Pyridoxal_deC PF00282.19 gi|14521976|ref|NP_127453.1| - 9.7e-05 21.2 0.0 0.00099 17.9 0.0 2.0 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain GDC-P PF02347.16 gi|14521977|ref|NP_127454.1| - 5.4e-126 420.9 0.0 6.1e-126 420.7 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|14521977|ref|NP_127454.1| - 4.2e-07 29.3 0.0 5.9e-07 28.8 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|14521977|ref|NP_127454.1| - 0.096 11.9 0.0 0.21 10.8 0.0 1.5 1 0 0 1 1 1 0 Beta-eliminating lyase HAD_2 PF13419.6 gi|14521978|ref|NP_127455.1| - 3.2e-10 40.4 0.0 5e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|14521978|ref|NP_127455.1| - 2.2e-07 31.5 0.0 2.7e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|14521978|ref|NP_127455.1| - 0.0013 19.1 0.0 0.084 13.1 0.0 2.1 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|14521978|ref|NP_127455.1| - 0.0046 17.0 0.0 2.8 8.1 0.0 2.4 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase NT5C PF06941.12 gi|14521978|ref|NP_127455.1| - 0.055 13.3 0.0 3.8 7.3 0.0 2.2 2 0 0 2 2 2 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_3 PF08282.12 gi|14521978|ref|NP_127455.1| - 0.24 11.1 0.0 0.9 9.2 0.0 1.8 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase dUTPase PF00692.19 gi|14521979|ref|NP_127456.1| - 2e-14 53.4 0.0 1.2e-12 47.7 0.0 2.0 1 1 1 2 2 2 2 dUTPase DCD PF06559.11 gi|14521979|ref|NP_127456.1| - 0.00025 20.0 0.0 0.11 11.3 0.0 2.4 1 1 1 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Ribosomal_60s PF00428.19 gi|14521981|ref|NP_127458.1| - 6.2e-20 71.6 21.3 7.2e-20 71.4 21.3 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein TetR_C_31 PF17940.1 gi|14521981|ref|NP_127458.1| - 4.5e-05 23.6 1.1 6.2e-05 23.2 1.1 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF3391 PF11871.8 gi|14521981|ref|NP_127458.1| - 0.084 13.4 3.0 0.098 13.2 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) UPF0154 PF03672.13 gi|14521981|ref|NP_127458.1| - 0.1 12.6 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) PhetRS_B1 PF18262.1 gi|14521981|ref|NP_127458.1| - 0.1 12.8 1.9 0.7 10.2 1.9 2.3 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain DprA_WH PF17782.1 gi|14521981|ref|NP_127458.1| - 0.12 12.5 0.2 0.12 12.5 0.2 2.3 1 1 1 2 2 2 0 DprA winged helix domain MCPVI PF02993.14 gi|14521981|ref|NP_127458.1| - 0.33 10.8 1.1 0.36 10.6 1.1 1.1 1 0 0 1 1 1 0 Minor capsid protein VI DUF1840 PF08895.11 gi|14521981|ref|NP_127458.1| - 0.96 9.8 8.5 1.6 9.1 8.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1840) RL10P_insert PF17777.1 gi|14521982|ref|NP_127459.1| - 9.7e-24 83.2 0.3 2.7e-23 81.7 0.3 1.8 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 gi|14521982|ref|NP_127459.1| - 9.8e-22 77.0 0.0 2.1e-21 75.9 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.19 gi|14521982|ref|NP_127459.1| - 6.3e-08 33.1 16.9 6.3e-08 33.1 16.9 2.4 2 1 0 2 2 2 1 60s Acidic ribosomal protein 7TMR-HDED PF07697.11 gi|14521982|ref|NP_127459.1| - 0.087 12.9 0.1 0.087 12.9 0.1 2.6 2 1 0 2 2 2 0 7TM-HD extracellular DUF4724 PF15852.5 gi|14521982|ref|NP_127459.1| - 0.6 10.6 3.9 1.1 9.8 3.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4724) Cytomega_UL84 PF06284.11 gi|14521982|ref|NP_127459.1| - 1.1 7.6 4.2 1.7 7.0 4.2 1.2 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein PBP_sp32 PF07222.12 gi|14521982|ref|NP_127459.1| - 7.4 5.9 7.9 12 5.3 7.9 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Pyrococcus_abyssi_GE5_uid62903/NC_000868.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Pyrococcus_abyssi_GE5_uid62903/NC_000868.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Pyrococcus_abyssi_GE5_uid62903/NC_000868.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Pyrococcus_abyssi_GE5_uid62903/NC_000868.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:10:41 2019 # [ok]