# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YcfA PF07927.7 gi|76803319|ref|YP_327763.1| - 8.1e-13 48.0 0.0 9.9e-13 47.7 0.0 1.1 1 0 0 1 1 1 1 YcfA-like protein UPF0150 PF03681.10 gi|76803320|ref|YP_327764.1| - 3.5e-06 26.5 0.1 6.2e-06 25.7 0.1 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) Sigma70_r1_1 PF03979.9 gi|76803320|ref|YP_327764.1| - 0.025 14.5 0.1 0.042 13.7 0.1 1.3 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 TP6A_N PF04406.9 gi|76803321|ref|YP_327765.1| - 0.029 14.0 0.3 0.11 12.1 0.2 1.9 1 1 0 1 1 1 0 Type IIB DNA topoisomerase Phage_Cox PF10743.4 gi|76803321|ref|YP_327765.1| - 0.038 14.0 0.6 0.093 12.7 0.2 1.8 2 0 0 2 2 2 0 Regulatory phage protein cox DUF1819 PF08849.6 gi|76803322|ref|YP_327766.1| - 0.00077 18.9 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Putative inner membrane protein (DUF1819) Antitoxin-MazE PF04014.13 gi|76803323|ref|YP_327767.1| - 0.047 13.4 0.1 0.075 12.7 0.1 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE DUF2975 PF11188.3 gi|76803324|ref|YP_327768.1| - 0.4 10.3 3.3 0.78 9.4 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) DUF4341 PF14241.1 gi|76803324|ref|YP_327768.1| - 1.8 8.3 12.6 0.99 9.1 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4341) TrbC PF04956.8 gi|76803325|ref|YP_327769.1| - 0.021 14.8 2.8 0.033 14.2 1.4 1.7 1 1 1 2 2 2 0 TrbC/VIRB2 family DUF2975 PF11188.3 gi|76803325|ref|YP_327769.1| - 0.077 12.7 1.3 0.14 11.8 0.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1206 PF06724.6 gi|76803325|ref|YP_327769.1| - 2.2 8.0 8.2 8.7 6.1 5.2 2.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) DUF4341 PF14241.1 gi|76803325|ref|YP_327769.1| - 5.3 6.8 10.1 0.42 10.3 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4341) DUF4383 PF14325.1 gi|76803326|ref|YP_327770.1| - 0.071 13.1 4.1 0.079 12.9 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) DUF4330 PF14221.1 gi|76803326|ref|YP_327770.1| - 0.44 10.3 5.9 0.081 12.7 1.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4330) DUF4131 PF13567.1 gi|76803327|ref|YP_327771.1| - 0.1 12.0 4.6 0.47 9.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3112 PF11309.3 gi|76803327|ref|YP_327771.1| - 0.31 10.8 1.5 1.3 8.7 1.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3112) vWA-TerF-like PF10138.4 gi|76803328|ref|YP_327772.1| - 0.052 13.3 0.1 0.12 12.2 0.0 1.6 2 0 0 2 2 2 0 vWA found in TerF C terminus E1-E2_ATPase PF00122.15 gi|76803329|ref|YP_327773.1| - 0.1 11.6 0.8 0.13 11.3 0.5 1.1 1 0 0 1 1 1 0 E1-E2 ATPase DUF3487 PF11990.3 gi|76803329|ref|YP_327773.1| - 0.16 11.3 0.4 0.18 11.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) IncA PF04156.9 gi|76803329|ref|YP_327773.1| - 0.42 10.1 5.8 0.54 9.8 4.0 1.1 1 0 0 1 1 1 0 IncA protein DUF2970 PF11174.3 gi|76803329|ref|YP_327773.1| - 0.47 10.0 0.1 0.47 10.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) DUF2628 PF10947.3 gi|76803329|ref|YP_327773.1| - 0.94 9.3 2.8 1.2 8.9 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF389 PF04087.9 gi|76803331|ref|YP_327775.1| - 0.0021 18.0 2.2 0.0025 17.7 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF389) DUF1761 PF08570.5 gi|76803331|ref|YP_327775.1| - 0.0029 17.6 0.8 0.0033 17.4 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1761) NfeD PF01957.13 gi|76803331|ref|YP_327775.1| - 0.14 12.3 3.2 0.16 12.0 2.2 1.1 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding PRA1 PF03208.14 gi|76803331|ref|YP_327775.1| - 0.34 10.2 2.1 0.36 10.1 1.5 1.1 1 0 0 1 1 1 0 PRA1 family protein YrvL PF14184.1 gi|76803331|ref|YP_327775.1| - 0.6 9.9 3.3 0.7 9.7 2.3 1.1 1 0 0 1 1 1 0 Regulatory protein YrvL DUF95 PF01944.12 gi|76803331|ref|YP_327775.1| - 1.1 8.8 5.5 1.4 8.5 3.8 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF95 DUF898 PF05987.8 gi|76803331|ref|YP_327775.1| - 1.1 8.0 4.6 1.2 7.9 3.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF3995 PF13160.1 gi|76803331|ref|YP_327775.1| - 4.7 7.2 7.1 61 3.6 4.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3995) Cytochrom_B_N PF00033.14 gi|76803332|ref|YP_327776.1| - 0.019 14.3 1.2 0.019 14.3 0.8 1.1 1 0 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB TAT_signal PF10518.4 gi|76803334|ref|YP_327778.1| - 0.021 14.8 7.9 0.037 14.0 5.5 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Gal4_dimer PF03902.8 gi|76803334|ref|YP_327778.1| - 0.27 11.1 1.9 0.53 10.2 1.3 1.4 1 0 0 1 1 1 0 Gal4-like dimerisation domain CarboxypepD_reg PF13620.1 gi|76803335|ref|YP_327779.1| - 0.0042 17.1 2.8 21 5.2 0.0 4.5 5 0 0 5 5 5 3 Carboxypeptidase regulatory-like domain DUF2754 PF10953.3 gi|76803336|ref|YP_327780.1| - 0.15 12.1 0.4 3.5 7.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2754) ABC2_membrane PF01061.19 gi|76803336|ref|YP_327780.1| - 1.6 7.8 11.1 0.17 11.0 2.9 1.9 2 0 0 2 2 2 0 ABC-2 type transporter Peptidase_M50 PF02163.17 gi|76803338|ref|YP_327782.1| - 0.47 9.3 1.7 0.67 8.8 0.1 1.8 1 1 1 2 2 2 0 Peptidase family M50 adh_short PF00106.20 gi|76803340|ref|YP_327784.1| - 0.0087 15.9 3.6 0.023 14.6 1.3 2.8 1 1 1 2 2 2 1 short chain dehydrogenase DUF4538 PF15061.1 gi|76803341|ref|YP_327785.1| - 0.016 14.5 0.7 0.044 13.1 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) EF-hand_5 PF13202.1 gi|76803342|ref|YP_327786.1| - 0.014 14.7 0.6 0.022 14.0 0.4 1.4 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.27 gi|76803342|ref|YP_327786.1| - 0.064 12.6 0.6 0.11 11.9 0.4 1.4 1 0 0 1 1 1 0 EF hand DUF2087 PF09860.4 gi|76803342|ref|YP_327786.1| - 0.07 12.8 0.1 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) PBP1_TM PF14812.1 gi|76803342|ref|YP_327786.1| - 0.25 11.6 5.0 0.32 11.3 3.5 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal LacI PF00356.16 gi|76803344|ref|YP_327788.1| - 0.00027 20.4 0.0 0.00061 19.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family MarR_2 PF12802.2 gi|76803344|ref|YP_327788.1| - 0.00059 19.4 0.0 0.0015 18.1 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_10 PF04967.7 gi|76803344|ref|YP_327788.1| - 0.0029 17.1 0.1 0.012 15.2 0.1 2.0 1 0 0 1 1 1 1 HTH DNA binding domain MarR PF01047.17 gi|76803344|ref|YP_327788.1| - 0.024 14.3 0.0 0.068 12.8 0.0 1.8 1 0 0 1 1 1 0 MarR family HTH_Tnp_4 PF13613.1 gi|76803344|ref|YP_327788.1| - 0.046 13.2 0.0 0.11 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Fe_dep_repress PF01325.14 gi|76803344|ref|YP_327788.1| - 0.052 13.4 0.4 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.5 gi|76803344|ref|YP_327788.1| - 0.06 12.9 0.1 0.14 11.7 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|76803344|ref|YP_327788.1| - 0.066 12.6 0.0 0.15 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF630 PF04783.7 gi|76803345|ref|YP_327789.1| - 0.02 14.7 0.3 0.029 14.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Phage_integrase PF00589.17 gi|76803347|ref|YP_327791.1| - 6.1e-11 42.2 0.0 2.1e-10 40.5 0.0 1.8 1 1 1 2 2 2 1 Phage integrase family Phage_int_SAM_1 PF02899.12 gi|76803347|ref|YP_327791.1| - 7.9e-09 35.5 0.6 5.1e-08 32.9 0.0 2.3 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.1 gi|76803347|ref|YP_327791.1| - 3.7e-06 27.1 0.0 9e-06 25.9 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF3619 PF12279.3 gi|76803351|ref|YP_327795.1| - 0.014 15.4 0.1 0.015 15.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3619) SLAC1 PF03595.12 gi|76803351|ref|YP_327795.1| - 0.077 11.6 2.9 0.083 11.5 2.0 1.0 1 0 0 1 1 1 0 Voltage-dependent anion channel TrbC PF04956.8 gi|76803351|ref|YP_327795.1| - 2.3 8.2 8.8 3.3 7.7 5.9 1.4 1 1 0 1 1 1 0 TrbC/VIRB2 family DoxX PF07681.7 gi|76803351|ref|YP_327795.1| - 5.9 7.3 9.1 15 6.1 6.3 1.7 1 1 0 1 1 1 0 DoxX YbaB_DNA_bd PF02575.11 gi|76803352|ref|YP_327796.1| - 0.076 12.9 2.1 0.12 12.2 1.5 1.4 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family B12-binding_2 PF02607.12 gi|76803352|ref|YP_327796.1| - 0.44 10.6 3.9 1.2 9.2 1.7 2.0 1 1 1 2 2 2 0 B12 binding domain Zn-ribbon_8 PF09723.5 gi|76803353|ref|YP_327797.1| - 0.0038 17.1 0.4 0.0055 16.6 0.3 1.4 1 1 0 1 1 1 1 Zinc ribbon domain RecR PF02132.10 gi|76803353|ref|YP_327797.1| - 0.055 12.9 0.1 0.087 12.2 0.0 1.3 1 0 0 1 1 1 0 RecR protein zf-ribbon_3 PF13248.1 gi|76803353|ref|YP_327797.1| - 0.1 11.8 0.5 0.2 10.8 0.0 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Sgf11 PF08209.6 gi|76803353|ref|YP_327797.1| - 0.12 11.6 0.3 0.12 11.6 0.2 1.4 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein)