#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|289583313|ref|YP_003481723.1|	-	5.2e-18	64.8	0.1	1.4e-17	63.4	0.1	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|289583313|ref|YP_003481723.1|	-	4.2e-14	53.0	0.0	1.9e-13	50.9	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|289583313|ref|YP_003481723.1|	-	1.7e-10	41.5	3.1	3e-10	40.7	0.2	2.7	2	2	0	2	2	2	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|289583313|ref|YP_003481723.1|	-	9.3e-07	28.9	0.0	2.2e-06	27.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|289583313|ref|YP_003481723.1|	-	9.7e-06	26.0	0.1	2.3e-05	24.8	0.1	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|289583313|ref|YP_003481723.1|	-	2.4e-05	24.1	0.0	4.7e-05	23.2	0.0	1.6	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_7	PF12775.7	gi|289583313|ref|YP_003481723.1|	-	0.00028	20.5	0.0	0.00044	19.8	0.0	1.2	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
TniB	PF05621.11	gi|289583313|ref|YP_003481723.1|	-	0.00029	20.3	0.0	0.0007	19.1	0.0	1.6	2	0	0	2	2	2	1	Bacterial	TniB	protein
NACHT	PF05729.12	gi|289583313|ref|YP_003481723.1|	-	0.00042	20.3	0.0	0.00071	19.5	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
DUF815	PF05673.13	gi|289583313|ref|YP_003481723.1|	-	0.00089	18.5	0.0	0.0015	17.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Sigma54_activ_2	PF14532.6	gi|289583313|ref|YP_003481723.1|	-	0.0014	18.8	0.0	0.0034	17.5	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|289583313|ref|YP_003481723.1|	-	0.0017	18.1	0.1	0.0029	17.4	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.22	gi|289583313|ref|YP_003481723.1|	-	0.0023	18.3	0.0	0.0048	17.3	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
NB-ARC	PF00931.22	gi|289583313|ref|YP_003481723.1|	-	0.0025	17.1	0.0	0.004	16.4	0.0	1.2	1	0	0	1	1	1	1	NB-ARC	domain
DEAD	PF00270.29	gi|289583313|ref|YP_003481723.1|	-	0.0031	17.3	0.6	0.29	10.9	0.6	2.2	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_2	PF07724.14	gi|289583313|ref|YP_003481723.1|	-	0.0055	16.8	0.1	0.0099	16.0	0.1	1.4	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
PhoH	PF02562.16	gi|289583313|ref|YP_003481723.1|	-	0.006	16.1	1.2	0.99	8.8	1.0	2.6	1	1	0	1	1	1	1	PhoH-like	protein
DUF2075	PF09848.9	gi|289583313|ref|YP_003481723.1|	-	0.02	14.2	0.0	0.026	13.8	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
DUF87	PF01935.17	gi|289583313|ref|YP_003481723.1|	-	0.046	13.8	0.5	0.2	11.8	0.0	2.0	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
ATPase_2	PF01637.18	gi|289583313|ref|YP_003481723.1|	-	0.047	13.6	0.0	0.084	12.8	0.0	1.4	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
Mg_chelatase	PF01078.21	gi|289583313|ref|YP_003481723.1|	-	0.05	13.0	0.0	0.099	12.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.6	gi|289583313|ref|YP_003481723.1|	-	0.07	13.7	0.0	0.18	12.4	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|289583313|ref|YP_003481723.1|	-	0.084	12.6	0.3	1.7	8.4	0.0	2.2	1	1	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_lid_4	PF17864.1	gi|289583313|ref|YP_003481723.1|	-	0.73	9.6	3.8	0.96	9.2	1.4	2.3	2	0	0	2	2	2	0	RuvB	AAA	lid	domain
BofA	PF07441.11	gi|289583315|ref|YP_003481725.1|	-	0.0013	18.8	2.0	0.0013	18.8	2.0	2.2	1	1	1	2	2	2	2	SigmaK-factor	processing	regulatory	protein	BofA
PadR	PF03551.14	gi|289583316|ref|YP_003481726.1|	-	4e-17	61.9	0.8	4.9e-17	61.6	0.8	1.1	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.6	gi|289583316|ref|YP_003481726.1|	-	0.00072	19.5	0.0	0.00095	19.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF1495	PF07381.11	gi|289583316|ref|YP_003481726.1|	-	0.01	15.7	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_34	PF13601.6	gi|289583316|ref|YP_003481726.1|	-	0.021	15.0	0.0	0.026	14.7	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|289583316|ref|YP_003481726.1|	-	0.075	12.9	0.2	0.71	9.8	0.0	2.4	3	0	0	3	3	3	0	MarR	family
DUF4364	PF14277.6	gi|289583316|ref|YP_003481726.1|	-	0.11	12.2	0.0	0.13	12.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF505	PF04458.12	gi|289583316|ref|YP_003481726.1|	-	0.11	10.8	0.1	0.13	10.6	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
Ribosomal_S20p	PF01649.18	gi|289583316|ref|YP_003481726.1|	-	0.23	12.1	0.0	0.3	11.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S20
Usp	PF00582.26	gi|289583317|ref|YP_003481727.1|	-	5.7e-25	88.5	0.8	8e-25	88.0	0.8	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
Formyl_trans_N	PF00551.19	gi|289583318|ref|YP_003481728.1|	-	4.9e-10	39.4	0.0	1.3e-09	38.1	0.0	1.6	2	0	0	2	2	2	1	Formyl	transferase
Pribosyltran	PF00156.27	gi|289583319|ref|YP_003481729.1|	-	5e-20	71.6	0.0	8e-20	70.9	0.0	1.3	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|289583319|ref|YP_003481729.1|	-	4.4e-05	23.0	0.0	5.8e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|289583319|ref|YP_003481729.1|	-	0.018	14.5	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosyl	transferase
SAP	PF02037.27	gi|289583322|ref|YP_003481732.1|	-	0.17	11.7	0.0	6.6	6.6	0.0	2.8	3	0	0	3	3	3	0	SAP	domain
Prefoldin_2	PF01920.20	gi|289583324|ref|YP_003481734.1|	-	0.00041	20.3	6.0	0.0029	17.5	1.1	2.5	1	1	1	2	2	2	1	Prefoldin	subunit
Tropomyosin_1	PF12718.7	gi|289583324|ref|YP_003481734.1|	-	0.0012	19.0	8.2	0.0012	19.0	8.2	2.5	2	1	0	2	2	1	1	Tropomyosin	like
Atg14	PF10186.9	gi|289583324|ref|YP_003481734.1|	-	0.0016	17.6	0.9	0.0024	17.0	0.9	1.3	1	0	0	1	1	1	1	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Snapin_Pallidin	PF14712.6	gi|289583324|ref|YP_003481734.1|	-	0.0027	18.1	4.4	0.016	15.6	2.4	2.6	1	1	1	2	2	2	1	Snapin/Pallidin
CCDC144C	PF14915.6	gi|289583324|ref|YP_003481734.1|	-	0.0029	16.8	5.6	0.0051	16.0	5.6	1.3	1	0	0	1	1	1	1	CCDC144C	protein	coiled-coil	region
Spc7	PF08317.11	gi|289583324|ref|YP_003481734.1|	-	0.0033	16.3	5.0	0.0061	15.5	5.0	1.4	1	0	0	1	1	1	1	Spc7	kinetochore	protein
FtsK_SpoIIIE	PF01580.18	gi|289583324|ref|YP_003481734.1|	-	0.004	16.5	0.6	0.004	16.5	0.6	1.5	2	0	0	2	2	1	1	FtsK/SpoIIIE	family
MscS_porin	PF12795.7	gi|289583324|ref|YP_003481734.1|	-	0.0041	16.7	11.8	0.0076	15.8	11.8	1.4	1	0	0	1	1	1	1	Mechanosensitive	ion	channel	porin	domain
DUF2333	PF10095.9	gi|289583324|ref|YP_003481734.1|	-	0.0046	16.0	1.9	0.0066	15.5	1.9	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2333)
Fez1	PF06818.15	gi|289583324|ref|YP_003481734.1|	-	0.0061	17.0	6.6	0.0061	17.0	6.6	1.6	2	0	0	2	2	1	1	Fez1
SlyX	PF04102.12	gi|289583324|ref|YP_003481734.1|	-	0.01	16.5	8.2	0.066	13.8	8.1	2.4	1	1	0	1	1	1	0	SlyX
CLZ	PF16526.5	gi|289583324|ref|YP_003481734.1|	-	0.01	16.1	3.7	0.01	16.1	3.7	2.5	2	0	0	2	2	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
FlaC_arch	PF05377.11	gi|289583324|ref|YP_003481734.1|	-	0.012	16.0	1.1	0.24	11.8	0.3	2.9	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Nup54	PF13874.6	gi|289583324|ref|YP_003481734.1|	-	0.013	15.6	6.0	0.024	14.7	6.0	1.4	1	0	0	1	1	1	0	Nucleoporin	complex	subunit	54
CENP-F_leu_zip	PF10473.9	gi|289583324|ref|YP_003481734.1|	-	0.017	15.1	10.4	0.043	13.8	10.4	1.7	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Exonuc_VII_L	PF02601.15	gi|289583324|ref|YP_003481734.1|	-	0.028	14.0	3.2	0.022	14.3	1.6	1.6	2	0	0	2	2	2	0	Exonuclease	VII,	large	subunit
YscO-like	PF16789.5	gi|289583324|ref|YP_003481734.1|	-	0.031	14.3	5.6	0.06	13.4	5.6	1.4	1	0	0	1	1	1	0	YscO-like	protein
Laminin_II	PF06009.12	gi|289583324|ref|YP_003481734.1|	-	0.033	14.2	3.8	0.069	13.2	3.8	1.4	1	0	0	1	1	1	0	Laminin	Domain	II
Tropomyosin	PF00261.20	gi|289583324|ref|YP_003481734.1|	-	0.044	13.2	11.5	0.1	12.0	11.5	1.6	1	0	0	1	1	1	0	Tropomyosin
bZIP_1	PF00170.21	gi|289583324|ref|YP_003481734.1|	-	0.051	13.7	11.3	3.5	7.8	0.2	3.6	2	1	1	3	3	3	0	bZIP	transcription	factor
FPP	PF05911.11	gi|289583324|ref|YP_003481734.1|	-	0.054	11.7	4.9	0.079	11.1	4.9	1.2	1	0	0	1	1	1	0	Filament-like	plant	protein,	long	coiled-coil
End3	PF12761.7	gi|289583324|ref|YP_003481734.1|	-	0.056	13.6	0.3	0.056	13.6	0.3	3.0	4	0	0	4	4	3	0	Actin	cytoskeleton-regulatory	complex	protein	END3
ABC_tran_CTD	PF16326.5	gi|289583324|ref|YP_003481734.1|	-	0.074	13.3	12.1	2.2	8.6	0.5	3.3	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
Helo_like_N	PF17111.5	gi|289583324|ref|YP_003481734.1|	-	0.079	12.3	2.0	0.1	11.9	1.1	1.6	1	1	0	1	1	1	0	Fungal	N-terminal	domain	of	STAND	proteins
FH2	PF02181.23	gi|289583324|ref|YP_003481734.1|	-	0.082	12.0	2.6	0.12	11.5	2.2	1.5	2	0	0	2	2	1	0	Formin	Homology	2	Domain
T3SSipB	PF16535.5	gi|289583324|ref|YP_003481734.1|	-	0.083	13.4	3.1	0.14	12.6	3.1	1.3	1	0	0	1	1	1	0	Type	III	cell	invasion	protein	SipB
DivIVA	PF05103.13	gi|289583324|ref|YP_003481734.1|	-	0.096	12.8	6.2	0.23	11.6	6.2	1.7	1	1	0	1	1	1	0	DivIVA	protein
DUF3450	PF11932.8	gi|289583324|ref|YP_003481734.1|	-	0.11	11.8	8.7	0.19	11.0	8.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
TolA_bind_tri	PF16331.5	gi|289583324|ref|YP_003481734.1|	-	0.11	12.6	6.0	0.29	11.2	5.5	2.1	1	1	0	1	1	1	0	TolA	binding	protein	trimerisation
DUF1664	PF07889.12	gi|289583324|ref|YP_003481734.1|	-	0.11	12.5	1.8	0.76	9.8	0.8	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF3584	PF12128.8	gi|289583324|ref|YP_003481734.1|	-	0.12	9.8	8.0	0.17	9.3	8.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
NPV_P10	PF05531.12	gi|289583324|ref|YP_003481734.1|	-	0.12	12.8	3.9	12	6.4	3.5	2.8	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Phage_GP20	PF06810.11	gi|289583324|ref|YP_003481734.1|	-	0.14	12.0	6.3	0.3	10.9	6.3	1.5	1	0	0	1	1	1	0	Phage	minor	structural	protein	GP20
Baculo_PEP_C	PF04513.12	gi|289583324|ref|YP_003481734.1|	-	0.15	12.1	6.5	0.42	10.7	5.8	2.0	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Fmp27_WPPW	PF10359.9	gi|289583324|ref|YP_003481734.1|	-	0.16	10.8	4.0	0.26	10.1	4.0	1.3	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
DivIC	PF04977.15	gi|289583324|ref|YP_003481734.1|	-	0.17	11.7	10.9	1.9	8.3	3.6	3.0	1	1	2	3	3	3	0	Septum	formation	initiator
Phage_tail_NK	PF16532.5	gi|289583324|ref|YP_003481734.1|	-	0.18	11.4	1.2	7.6	6.1	0.2	2.4	1	1	1	2	2	2	0	Sf6-type	phage	tail	needle	knob	or	tip	of	some	Caudovirales
Bcr-Abl_Oligo	PF09036.10	gi|289583324|ref|YP_003481734.1|	-	0.22	11.6	1.0	0.47	10.5	0.2	2.0	2	0	0	2	2	1	0	Bcr-Abl	oncoprotein	oligomerisation	domain
XhlA	PF10779.9	gi|289583324|ref|YP_003481734.1|	-	0.22	11.7	8.4	0.081	13.1	2.1	2.7	1	1	2	3	3	3	0	Haemolysin	XhlA
YabA	PF06156.13	gi|289583324|ref|YP_003481734.1|	-	0.23	12.1	3.0	0.5	11.0	3.0	1.6	1	0	0	1	1	1	0	Initiation	control	protein	YabA
HAUS-augmin3	PF14932.6	gi|289583324|ref|YP_003481734.1|	-	0.28	10.7	9.1	0.48	10.0	9.1	1.3	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
Jnk-SapK_ap_N	PF09744.9	gi|289583324|ref|YP_003481734.1|	-	0.35	11.1	14.2	0.08	13.2	10.9	1.5	2	0	0	2	2	1	0	JNK_SAPK-associated	protein-1
HMMR_N	PF15905.5	gi|289583324|ref|YP_003481734.1|	-	0.35	10.3	8.1	1.5	8.2	8.2	1.7	1	1	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
bZIP_2	PF07716.15	gi|289583324|ref|YP_003481734.1|	-	0.35	11.0	16.5	4.4	7.4	0.4	4.0	4	0	0	4	4	3	0	Basic	region	leucine	zipper
KLRAQ	PF10205.9	gi|289583324|ref|YP_003481734.1|	-	0.37	11.1	4.8	0.15	12.3	2.1	1.8	2	0	0	2	2	1	0	Predicted	coiled-coil	domain-containing	protein
DUF4795	PF16043.5	gi|289583324|ref|YP_003481734.1|	-	0.41	10.2	4.9	2.9	7.5	4.9	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
Spectrin	PF00435.21	gi|289583324|ref|YP_003481734.1|	-	0.44	11.0	9.0	1.2	9.7	2.5	3.2	2	1	1	3	3	3	0	Spectrin	repeat
DUF4140	PF13600.6	gi|289583324|ref|YP_003481734.1|	-	0.45	11.0	9.1	3.5	8.1	1.1	2.9	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Macoilin	PF09726.9	gi|289583324|ref|YP_003481734.1|	-	0.45	9.0	5.6	0.62	8.5	5.6	1.1	1	0	0	1	1	1	0	Macoilin	family
HIP1_clath_bdg	PF16515.5	gi|289583324|ref|YP_003481734.1|	-	0.52	11.0	8.9	0.13	12.9	3.4	2.4	1	1	1	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
Rx_N	PF18052.1	gi|289583324|ref|YP_003481734.1|	-	0.61	10.4	4.6	2.1	8.7	4.6	2.0	1	1	0	1	1	1	0	Rx	N-terminal	domain
ADIP	PF11559.8	gi|289583324|ref|YP_003481734.1|	-	0.68	10.0	9.9	1.5	8.9	5.0	2.2	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Fzo_mitofusin	PF04799.13	gi|289583324|ref|YP_003481734.1|	-	0.7	9.4	4.0	0.48	10.0	1.7	1.8	1	1	1	2	2	2	0	fzo-like	conserved	region
DUF4763	PF15960.5	gi|289583324|ref|YP_003481734.1|	-	0.76	9.0	5.8	2.6	7.3	5.8	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4763)
MPS2	PF17060.5	gi|289583324|ref|YP_003481734.1|	-	0.78	8.9	3.2	0.68	9.1	1.7	1.7	2	0	0	2	2	2	0	Monopolar	spindle	protein	2
TPR_MLP1_2	PF07926.12	gi|289583324|ref|YP_003481734.1|	-	0.78	9.8	11.7	2.2	8.4	3.9	2.4	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
UPF0242	PF06785.11	gi|289583324|ref|YP_003481734.1|	-	1.3	9.1	8.3	2.5	8.2	8.3	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
TMF_DNA_bd	PF12329.8	gi|289583324|ref|YP_003481734.1|	-	1.3	9.0	12.0	1.1	9.2	1.1	3.0	2	1	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
DUF641	PF04859.12	gi|289583324|ref|YP_003481734.1|	-	1.6	9.0	8.7	0.11	12.8	1.5	2.5	2	1	1	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
JIP_LZII	PF16471.5	gi|289583324|ref|YP_003481734.1|	-	1.8	8.8	8.4	12	6.1	2.3	2.6	1	1	1	2	2	2	0	JNK-interacting	protein	leucine	zipper	II
DUF4407	PF14362.6	gi|289583324|ref|YP_003481734.1|	-	1.9	7.8	11.4	0.43	9.9	7.9	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
PspB	PF06667.12	gi|289583324|ref|YP_003481734.1|	-	2	8.5	9.3	0.78	9.8	0.5	3.2	2	1	1	3	3	2	0	Phage	shock	protein	B
TMF_TATA_bd	PF12325.8	gi|289583324|ref|YP_003481734.1|	-	2.4	8.4	10.4	1.4	9.1	8.3	1.7	2	0	0	2	2	1	0	TATA	element	modulatory	factor	1	TATA	binding
Pox_A_type_inc	PF04508.12	gi|289583324|ref|YP_003481734.1|	-	3.6	7.6	8.4	4	7.5	0.7	3.1	3	0	0	3	3	2	0	Viral	A-type	inclusion	protein	repeat
CorA	PF01544.18	gi|289583324|ref|YP_003481734.1|	-	3.7	6.8	5.7	6.7	5.9	5.7	1.4	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Matrilin_ccoil	PF10393.9	gi|289583324|ref|YP_003481734.1|	-	4	7.4	6.0	2.2	8.2	0.4	2.9	3	0	0	3	3	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Cluap1	PF10234.9	gi|289583324|ref|YP_003481734.1|	-	4.8	6.5	10.8	0.37	10.2	6.0	1.5	2	0	0	2	2	1	0	Clusterin-associated	protein-1
Prefoldin	PF02996.17	gi|289583324|ref|YP_003481734.1|	-	4.9	7.1	7.7	5.7	6.9	0.7	3.0	1	1	2	3	3	3	0	Prefoldin	subunit
ZapB	PF06005.12	gi|289583324|ref|YP_003481734.1|	-	5.7	7.5	11.6	7.7	7.0	4.3	2.5	1	1	1	2	2	2	0	Cell	division	protein	ZapB
FUSC	PF04632.12	gi|289583324|ref|YP_003481734.1|	-	7.5	4.9	8.0	13	4.2	8.0	1.3	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
APG6_N	PF17675.1	gi|289583324|ref|YP_003481734.1|	-	7.7	7.1	13.6	28	5.2	13.6	2.0	1	1	0	1	1	1	0	Apg6	coiled-coil	region
Mrr_N	PF14338.6	gi|289583326|ref|YP_003481736.1|	-	0.001	19.2	0.0	0.0026	17.9	0.0	1.8	1	1	0	1	1	1	1	Mrr	N-terminal	domain
DUF2161	PF09929.9	gi|289583326|ref|YP_003481736.1|	-	0.0064	16.6	0.0	0.0096	16.0	0.0	1.3	1	0	0	1	1	1	1	Putative	PD-(D/E)XK	phosphodiesterase	(DUF2161)
AbiEi_4	PF13338.6	gi|289583326|ref|YP_003481736.1|	-	0.15	12.3	0.2	0.75	10.0	0.3	2.0	2	0	0	2	2	2	0	Transcriptional	regulator,	AbiEi	antitoxin
DUF4145	PF13643.6	gi|289583327|ref|YP_003481737.1|	-	5.1e-21	74.6	0.0	7.6e-21	74.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4145)
CRISPR_Cse1	PF09481.10	gi|289583327|ref|YP_003481737.1|	-	0.019	14.0	0.0	0.026	13.6	0.0	1.1	1	0	0	1	1	1	0	CRISPR-associated	protein	Cse1	(CRISPR_cse1)
Zn_Tnp_IS1595	PF12760.7	gi|289583327|ref|YP_003481737.1|	-	0.17	11.9	1.0	0.24	11.4	0.0	1.7	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Usp	PF00582.26	gi|289583330|ref|YP_003481740.1|	-	5.7e-18	65.8	0.5	6.6e-18	65.6	0.5	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
Hydrolase	PF00702.26	gi|289583330|ref|YP_003481740.1|	-	0.012	15.9	0.0	0.014	15.7	0.0	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Linocin_M18	PF04454.12	gi|289583330|ref|YP_003481740.1|	-	0.088	12.1	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Encapsulating	protein	for	peroxidase
Pyr_redox_2	PF07992.14	gi|289583331|ref|YP_003481741.1|	-	7.9e-48	163.2	0.1	1.1e-47	162.7	0.1	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|289583331|ref|YP_003481741.1|	-	3.2e-23	82.1	0.1	5.6e-23	81.3	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|289583331|ref|YP_003481741.1|	-	2.4e-17	63.2	2.0	1.4e-13	51.2	0.0	3.1	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583331|ref|YP_003481741.1|	-	2.9e-06	26.8	0.0	0.001	18.4	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.6	gi|289583331|ref|YP_003481741.1|	-	0.00049	19.3	0.1	0.0035	16.5	0.0	2.3	3	0	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_2	PF00890.24	gi|289583331|ref|YP_003481741.1|	-	0.0047	16.1	2.3	0.0049	16.0	0.4	1.9	2	0	0	2	2	2	1	FAD	binding	domain
3HCDH_N	PF02737.18	gi|289583331|ref|YP_003481741.1|	-	0.0056	16.6	0.0	0.84	9.5	0.0	2.3	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.6	gi|289583331|ref|YP_003481741.1|	-	0.58	10.4	3.5	2.1	8.6	0.2	2.9	3	0	0	3	3	3	0	NAD(P)-binding	Rossmann-like	domain
Lactamase_B	PF00753.27	gi|289583332|ref|YP_003481742.1|	-	6.1e-20	72.1	8.7	1.3e-19	71.0	8.7	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Rhodanese	PF00581.20	gi|289583332|ref|YP_003481742.1|	-	2.7e-08	34.3	0.0	2.8e-07	31.0	0.0	2.4	2	1	1	3	3	3	1	Rhodanese-like	domain
Lactamase_B_2	PF12706.7	gi|289583332|ref|YP_003481742.1|	-	0.098	12.2	0.7	0.2	11.1	0.7	1.6	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|289583332|ref|YP_003481742.1|	-	0.12	12.3	0.0	0.23	11.3	0.0	1.5	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
TrmB	PF01978.19	gi|289583333|ref|YP_003481743.1|	-	8.5e-17	60.8	0.0	1.1e-16	60.4	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.16	gi|289583333|ref|YP_003481743.1|	-	3.2e-05	24.3	0.0	4.3e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_IclR	PF09339.10	gi|289583333|ref|YP_003481743.1|	-	5.2e-05	22.9	0.0	9.6e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583333|ref|YP_003481743.1|	-	0.00011	21.7	0.0	0.00017	21.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|289583333|ref|YP_003481743.1|	-	0.00012	21.9	0.0	0.0002	21.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|289583333|ref|YP_003481743.1|	-	0.0002	21.2	0.0	0.00037	20.4	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.7	gi|289583333|ref|YP_003481743.1|	-	0.0021	18.1	0.0	0.0037	17.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
UMPH-1	PF05822.12	gi|289583333|ref|YP_003481743.1|	-	0.0047	16.5	0.1	0.0074	15.8	0.1	1.3	1	1	0	1	1	1	1	Pyrimidine	5'-nucleotidase	(UMPH-1)
MarR_2	PF12802.7	gi|289583333|ref|YP_003481743.1|	-	0.0056	16.5	0.0	0.0092	15.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|289583333|ref|YP_003481743.1|	-	0.0062	17.0	0.0	0.0096	16.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4777	PF16007.5	gi|289583333|ref|YP_003481743.1|	-	0.012	15.9	0.0	0.051	13.8	0.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4777)
RuvB_C	PF05491.13	gi|289583333|ref|YP_003481743.1|	-	0.013	15.4	0.0	0.022	14.6	0.0	1.4	1	0	0	1	1	1	0	RuvB	C-terminal	winged	helix	domain
Rrf2	PF02082.20	gi|289583333|ref|YP_003481743.1|	-	0.016	15.5	0.0	0.049	14.0	0.0	1.7	2	0	0	2	2	2	0	Transcriptional	regulator
2OG-Fe_Oxy_2	PF10014.9	gi|289583333|ref|YP_003481743.1|	-	0.033	14.0	0.2	0.044	13.6	0.2	1.2	1	0	0	1	1	1	0	2OG-Fe	dioxygenase
HTH_28	PF13518.6	gi|289583333|ref|YP_003481743.1|	-	0.048	13.8	0.0	0.094	12.9	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|289583333|ref|YP_003481743.1|	-	0.066	13.0	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
PqqD	PF05402.12	gi|289583333|ref|YP_003481743.1|	-	0.079	13.3	0.5	13	6.2	0.1	2.9	2	1	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
HTH_Crp_2	PF13545.6	gi|289583333|ref|YP_003481743.1|	-	0.095	12.7	0.3	0.4	10.7	0.2	1.9	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF4423	PF14394.6	gi|289583333|ref|YP_003481743.1|	-	0.12	12.1	0.0	0.34	10.6	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Peptidase_S8	PF00082.22	gi|289583334|ref|YP_003481744.1|	-	6.5e-41	140.5	3.5	1e-40	139.9	3.5	1.2	1	0	0	1	1	1	1	Subtilase	family
Kri1	PF05178.12	gi|289583334|ref|YP_003481744.1|	-	0.055	14.0	0.3	0.09	13.3	0.3	1.3	1	0	0	1	1	1	0	KRI1-like	family
zinc_ribbon_2	PF13240.6	gi|289583335|ref|YP_003481745.1|	-	6.3e-06	25.7	1.7	8e-06	25.4	1.7	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
HypA	PF01155.19	gi|289583335|ref|YP_003481745.1|	-	9.4e-05	22.4	0.7	0.00011	22.2	0.7	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-ribbon_3	PF13248.6	gi|289583335|ref|YP_003481745.1|	-	0.00012	21.4	1.4	0.00017	20.9	1.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RING_7	PF02591.15	gi|289583335|ref|YP_003481745.1|	-	0.00022	21.3	2.8	0.27	11.5	0.2	2.1	2	0	0	2	2	2	2	C4-type	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|289583335|ref|YP_003481745.1|	-	0.00033	20.6	0.2	0.5	10.4	0.0	2.1	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289583335|ref|YP_003481745.1|	-	0.00052	20.7	0.4	0.00056	20.6	0.4	1.1	1	0	0	1	1	1	1	zinc-ribbon	family
DZR	PF12773.7	gi|289583335|ref|YP_003481745.1|	-	0.0006	19.8	0.6	0.00066	19.7	0.6	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
Zn-ribbon_8	PF09723.10	gi|289583335|ref|YP_003481745.1|	-	0.00094	19.3	4.9	0.0025	17.9	4.6	1.7	1	1	0	1	1	1	1	Zinc	ribbon	domain
Prok-RING_1	PF14446.6	gi|289583335|ref|YP_003481745.1|	-	0.0035	17.2	2.2	0.0047	16.8	2.2	1.2	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
TFIIS_C	PF01096.18	gi|289583335|ref|YP_003481745.1|	-	0.0042	16.9	0.7	0.57	10.1	0.1	2.1	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
Zn_ribbon_17	PF17120.5	gi|289583335|ref|YP_003481745.1|	-	0.0091	15.6	0.7	0.011	15.3	0.7	1.1	1	0	0	1	1	1	1	Zinc-ribbon,	C4HC2	type
zf-ISL3	PF14690.6	gi|289583335|ref|YP_003481745.1|	-	0.021	15.5	2.0	0.37	11.5	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-IS66	PF13005.7	gi|289583335|ref|YP_003481745.1|	-	0.022	15.2	2.1	3.9	8.0	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zinc-ribbons_6	PF07191.12	gi|289583335|ref|YP_003481745.1|	-	0.022	14.7	0.9	0.025	14.6	0.9	1.1	1	0	0	1	1	1	0	zinc-ribbons
OrfB_Zn_ribbon	PF07282.11	gi|289583335|ref|YP_003481745.1|	-	0.027	14.4	2.9	0.087	12.8	2.9	1.7	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
RNA_POL_M_15KD	PF02150.16	gi|289583335|ref|YP_003481745.1|	-	0.029	14.2	3.2	0.38	10.7	0.2	2.2	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-RRN7	PF11781.8	gi|289583335|ref|YP_003481745.1|	-	0.038	13.7	5.0	0.71	9.6	0.2	2.2	1	1	1	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Zn_Tnp_IS1	PF03811.13	gi|289583335|ref|YP_003481745.1|	-	0.043	13.5	2.8	0.7	9.7	0.2	2.2	2	0	0	2	2	2	0	InsA	N-terminal	domain
zf-BED	PF02892.15	gi|289583335|ref|YP_003481745.1|	-	0.07	13.2	0.7	0.12	12.5	0.7	1.4	1	1	0	1	1	1	0	BED	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|289583335|ref|YP_003481745.1|	-	0.12	11.9	6.0	1.2	8.7	0.6	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
NRDD	PF13597.6	gi|289583335|ref|YP_003481745.1|	-	0.13	11.0	2.0	0.15	10.8	2.0	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zinc_ribbon_9	PF14369.6	gi|289583335|ref|YP_003481745.1|	-	0.14	12.4	4.2	0.5	10.7	4.2	1.8	1	1	0	1	1	1	0	zinc-ribbon
Lar_restr_allev	PF14354.6	gi|289583335|ref|YP_003481745.1|	-	0.16	12.4	2.2	3.6	8.0	0.2	2.1	1	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
Rubredoxin_2	PF18073.1	gi|289583335|ref|YP_003481745.1|	-	0.24	11.2	5.2	1.7	8.4	5.2	2.1	1	1	0	1	1	1	0	Rubredoxin	metal	binding	domain
zf-Mss51	PF13824.6	gi|289583335|ref|YP_003481745.1|	-	0.35	11.0	4.1	1.1	9.4	0.1	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Terminase_GpA	PF05876.12	gi|289583335|ref|YP_003481745.1|	-	0.36	9.3	1.6	0.39	9.2	0.1	1.6	1	1	1	2	2	2	0	Phage	terminase	large	subunit	(GpA)
DUF35_N	PF12172.8	gi|289583335|ref|YP_003481745.1|	-	0.56	10.1	5.3	11	6.0	5.4	2.1	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
MFS_1	PF07690.16	gi|289583336|ref|YP_003481746.1|	-	3.7e-44	151.1	59.8	4.2e-41	141.1	37.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289583336|ref|YP_003481746.1|	-	5.8e-12	45.2	14.2	6.4e-08	31.8	9.1	2.6	1	1	1	2	2	2	2	MFS_1	like	family
OATP	PF03137.20	gi|289583336|ref|YP_003481746.1|	-	6.3e-06	24.8	9.4	6.3e-05	21.5	0.1	3.2	3	0	0	3	3	3	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
LacY_symp	PF01306.19	gi|289583336|ref|YP_003481746.1|	-	0.0001	21.2	7.7	0.0001	21.2	7.7	2.2	2	0	0	2	2	2	1	LacY	proton/sugar	symporter
Tmemb_161AB	PF10268.9	gi|289583336|ref|YP_003481746.1|	-	0.01	14.5	0.1	0.026	13.2	0.0	1.7	2	0	0	2	2	2	0	Predicted	transmembrane	protein	161AB
TssN	PF17555.2	gi|289583336|ref|YP_003481746.1|	-	0.18	11.2	6.1	0.12	11.7	3.7	1.8	1	1	0	1	1	1	0	Type	VI	secretion	system,	TssN
DUF5531	PF17671.1	gi|289583336|ref|YP_003481746.1|	-	0.22	11.4	1.3	8	6.3	0.0	2.4	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5531)
Pirin	PF02678.16	gi|289583337|ref|YP_003481747.1|	-	1.7e-13	50.5	0.4	1.6e-12	47.3	0.2	2.1	2	0	0	2	2	2	1	Pirin
Pirin_C_2	PF17954.1	gi|289583337|ref|YP_003481747.1|	-	5.9e-06	26.4	0.2	1.5e-05	25.1	0.0	1.7	2	0	0	2	2	2	1	Quercetinase	C-terminal	cupin	domain
Pirin_C	PF05726.13	gi|289583337|ref|YP_003481747.1|	-	0.00019	21.7	0.1	0.0017	18.7	0.0	2.4	3	0	0	3	3	3	1	Pirin	C-terminal	cupin	domain
Cupin_2	PF07883.11	gi|289583337|ref|YP_003481747.1|	-	0.048	13.4	0.1	1.4	8.7	0.1	2.5	2	0	0	2	2	2	0	Cupin	domain
MCPsignal	PF00015.21	gi|289583338|ref|YP_003481748.1|	-	1.1e-36	126.3	60.2	6.8e-36	123.7	29.0	5.1	1	1	4	5	5	5	4	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
HAMP	PF00672.25	gi|289583338|ref|YP_003481748.1|	-	2.9e-10	40.3	13.7	2.2e-07	31.2	0.0	6.1	5	1	1	6	6	6	1	HAMP	domain
DUF948	PF06103.11	gi|289583338|ref|YP_003481748.1|	-	9.6e-07	29.0	44.9	0.053	13.8	3.8	6.8	2	2	4	6	6	6	4	Bacterial	protein	of	unknown	function	(DUF948)
Laminin_II	PF06009.12	gi|289583338|ref|YP_003481748.1|	-	9.1e-05	22.5	38.0	0.017	15.1	3.2	5.6	2	1	2	5	5	5	3	Laminin	Domain	II
UPF0242	PF06785.11	gi|289583338|ref|YP_003481748.1|	-	0.00073	19.7	15.3	0.19	11.8	0.0	3.9	2	1	2	4	4	4	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
Spc7	PF08317.11	gi|289583338|ref|YP_003481748.1|	-	0.0033	16.3	37.9	0.14	11.0	9.9	3.5	1	1	1	3	3	3	2	Spc7	kinetochore	protein
DUF1664	PF07889.12	gi|289583338|ref|YP_003481748.1|	-	0.0079	16.2	36.7	0.031	14.3	2.7	6.1	1	1	5	7	7	7	3	Protein	of	unknown	function	(DUF1664)
Fib_alpha	PF08702.10	gi|289583338|ref|YP_003481748.1|	-	0.011	16.0	25.8	0.39	10.9	4.6	4.5	2	1	2	4	4	4	0	Fibrinogen	alpha/beta	chain	family
DUF4200	PF13863.6	gi|289583338|ref|YP_003481748.1|	-	0.018	15.4	0.6	0.018	15.4	0.6	4.1	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4200)
Prominin	PF05478.11	gi|289583338|ref|YP_003481748.1|	-	0.054	11.4	18.6	0.0064	14.5	4.7	2.4	1	1	0	2	2	2	0	Prominin
AAA_13	PF13166.6	gi|289583338|ref|YP_003481748.1|	-	0.11	11.2	35.0	0.086	11.5	14.1	2.9	1	1	2	3	3	3	0	AAA	domain
BLOC1_2	PF10046.9	gi|289583338|ref|YP_003481748.1|	-	0.14	12.5	34.9	5	7.5	1.6	6.7	4	2	3	7	7	6	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF3584	PF12128.8	gi|289583338|ref|YP_003481748.1|	-	0.14	9.6	40.4	0.088	10.3	31.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
NPV_P10	PF05531.12	gi|289583338|ref|YP_003481748.1|	-	0.4	11.2	38.9	3.7	8.1	0.8	7.4	5	2	2	7	7	7	0	Nucleopolyhedrovirus	P10	protein
COG2	PF06148.11	gi|289583338|ref|YP_003481748.1|	-	0.41	10.7	32.3	0.43	10.7	1.5	5.6	2	2	3	5	5	5	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
ZapB	PF06005.12	gi|289583338|ref|YP_003481748.1|	-	0.43	11.0	29.4	2	8.9	0.1	5.1	3	1	1	4	4	4	0	Cell	division	protein	ZapB
DUF3450	PF11932.8	gi|289583338|ref|YP_003481748.1|	-	0.54	9.5	47.0	0.047	13.0	4.7	5.3	2	2	2	5	5	5	0	Protein	of	unknown	function	(DUF3450)
Sec34	PF04136.15	gi|289583338|ref|YP_003481748.1|	-	0.87	9.5	27.1	4.3	7.2	2.3	5.4	3	2	3	6	6	6	0	Sec34-like	family
Rab5-bind	PF09311.11	gi|289583338|ref|YP_003481748.1|	-	0.98	8.7	34.9	0.72	9.2	1.7	4.1	2	1	1	4	4	4	0	Rabaptin-like	protein
DHR10	PF18595.1	gi|289583338|ref|YP_003481748.1|	-	1.1	9.3	44.4	0.55	10.3	0.5	5.1	2	1	1	4	4	4	0	Designed	helical	repeat	protein	10	domain
PilO	PF04350.13	gi|289583338|ref|YP_003481748.1|	-	1.5	9.0	7.8	0.9	9.7	0.3	3.7	1	1	3	4	4	4	0	Pilus	assembly	protein,	PilO
DUF812	PF05667.11	gi|289583338|ref|YP_003481748.1|	-	1.8	7.4	33.7	0.36	9.7	8.3	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
RPW8	PF05659.11	gi|289583338|ref|YP_003481748.1|	-	1.9	8.2	12.8	8.1	6.1	0.0	5.0	2	2	2	4	4	4	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Goodbye	PF17109.5	gi|289583338|ref|YP_003481748.1|	-	2	8.9	23.2	0.56	10.7	1.2	5.4	4	3	1	5	5	5	0	fungal	STAND	N-terminal	Goodbye	domain
DASH_Duo1	PF08651.10	gi|289583338|ref|YP_003481748.1|	-	3.8	7.4	16.3	11	5.8	0.5	5.9	4	2	2	6	6	6	0	DASH	complex	subunit	Duo1
Fzo_mitofusin	PF04799.13	gi|289583338|ref|YP_003481748.1|	-	3.9	7.0	25.7	1.1	8.8	0.3	5.0	3	2	2	5	5	5	0	fzo-like	conserved	region
Holin_BhlA	PF10960.8	gi|289583338|ref|YP_003481748.1|	-	4.6	7.3	7.1	4.1	7.4	0.0	3.8	4	0	0	4	4	3	0	BhlA	holin	family
DASH_Dam1	PF08653.10	gi|289583338|ref|YP_003481748.1|	-	5.7	6.8	12.3	8.5	6.3	0.1	5.8	7	0	0	7	7	6	0	DASH	complex	subunit	Dam1
S_4TM	PF18159.1	gi|289583338|ref|YP_003481748.1|	-	5.9	6.1	8.0	0.28	10.5	0.1	2.8	3	0	0	3	3	3	0	SMODS-associating	4TM	effector	domain
BORCS7	PF16088.5	gi|289583338|ref|YP_003481748.1|	-	6.1	7.2	21.2	1.3	9.4	2.5	4.5	3	1	0	3	3	3	0	BLOC-1-related	complex	sub-unit	7
DUF2203	PF09969.9	gi|289583338|ref|YP_003481748.1|	-	7.9	7.2	31.2	0.78	10.5	1.0	5.4	2	1	3	5	5	5	0	Uncharacterized	conserved	protein	(DUF2203)
YkyA	PF10368.9	gi|289583338|ref|YP_003481748.1|	-	8.8	6.0	34.4	7.2	6.2	10.6	4.3	2	1	2	4	4	4	0	Putative	cell-wall	binding	lipoprotein
BLI1	PF17324.2	gi|289583338|ref|YP_003481748.1|	-	9.1	7.0	12.8	2.1	9.1	0.2	3.7	3	1	0	4	4	3	0	BLOC-1	interactor	1
VKOR	PF07884.14	gi|289583339|ref|YP_003481749.1|	-	4.8e-19	68.8	11.0	4.8e-19	68.8	11.0	1.5	2	0	0	2	2	2	1	Vitamin	K	epoxide	reductase	family
Thioredoxin	PF00085.20	gi|289583340|ref|YP_003481750.1|	-	7.5e-28	96.5	0.0	8.3e-28	96.4	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|289583340|ref|YP_003481750.1|	-	4.5e-12	46.4	0.1	2.3e-10	40.9	0.1	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.6	gi|289583340|ref|YP_003481750.1|	-	2.8e-06	27.6	0.0	0.0039	17.5	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
DSBA	PF01323.20	gi|289583340|ref|YP_003481750.1|	-	3.4e-06	27.0	0.5	0.00017	21.4	0.0	2.0	1	1	1	2	2	2	1	DSBA-like	thioredoxin	domain
Thioredoxin_9	PF14595.6	gi|289583340|ref|YP_003481750.1|	-	5.9e-05	22.8	0.0	6.9e-05	22.6	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
TraF	PF13728.6	gi|289583340|ref|YP_003481750.1|	-	0.00012	22.0	0.0	0.00016	21.6	0.0	1.1	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Thioredoxin_7	PF13899.6	gi|289583340|ref|YP_003481750.1|	-	0.00096	19.3	0.1	0.0019	18.3	0.1	1.5	1	1	0	1	1	1	1	Thioredoxin-like
HyaE	PF07449.11	gi|289583340|ref|YP_003481750.1|	-	0.0017	18.3	0.0	0.0026	17.7	0.0	1.5	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_3	PF13192.6	gi|289583340|ref|YP_003481750.1|	-	0.0029	17.6	0.0	0.0041	17.1	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|289583340|ref|YP_003481750.1|	-	0.003	17.7	0.0	0.0049	17.1	0.0	1.4	1	0	0	1	1	1	1	Glutaredoxin
DUF836	PF05768.14	gi|289583340|ref|YP_003481750.1|	-	0.0082	16.5	0.0	0.012	16.0	0.0	1.2	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
AhpC-TSA	PF00578.21	gi|289583340|ref|YP_003481750.1|	-	0.017	15.0	0.0	0.26	11.2	0.0	2.0	1	1	1	2	2	2	0	AhpC/TSA	family
OST3_OST6	PF04756.13	gi|289583340|ref|YP_003481750.1|	-	0.025	13.9	0.0	0.031	13.6	0.0	1.1	1	0	0	1	1	1	0	OST3	/	OST6	family,	transporter	family
Thioredoxin_5	PF13743.6	gi|289583340|ref|YP_003481750.1|	-	0.081	12.6	0.0	0.14	11.8	0.0	1.4	1	1	0	1	1	1	0	Thioredoxin
Neisseria_TspB	PF05616.13	gi|289583340|ref|YP_003481750.1|	-	0.13	10.7	0.0	0.15	10.5	0.0	1.0	1	0	0	1	1	1	0	Neisseria	meningitidis	TspB	protein
Pyr_redox_2	PF07992.14	gi|289583341|ref|YP_003481751.1|	-	4e-43	147.7	0.7	5.1e-43	147.4	0.7	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289583341|ref|YP_003481751.1|	-	5e-20	71.9	0.4	2.1e-17	63.5	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583341|ref|YP_003481751.1|	-	2.4e-17	63.2	0.0	1.8e-13	50.4	0.0	2.3	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583341|ref|YP_003481751.1|	-	7.3e-08	31.9	6.6	4e-05	22.9	0.2	4.0	4	1	1	5	5	5	2	FAD	binding	domain
DAO	PF01266.24	gi|289583341|ref|YP_003481751.1|	-	3.6e-07	30.1	2.7	0.0014	18.3	0.2	3.5	3	1	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|289583341|ref|YP_003481751.1|	-	6.2e-06	25.6	0.1	0.00026	20.3	0.0	2.3	2	0	0	2	2	2	1	Thi4	family
HI0933_like	PF03486.14	gi|289583341|ref|YP_003481751.1|	-	1.2e-05	24.3	0.6	0.11	11.1	0.0	3.5	4	0	0	4	4	4	2	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|289583341|ref|YP_003481751.1|	-	1.6e-05	24.5	0.8	0.00023	20.7	0.2	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|289583341|ref|YP_003481751.1|	-	1.8e-05	24.9	0.3	0.00022	21.4	0.1	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|289583341|ref|YP_003481751.1|	-	9e-05	21.7	0.5	0.093	11.8	0.1	2.9	3	0	0	3	3	3	2	Lycopene	cyclase	protein
GIDA	PF01134.22	gi|289583341|ref|YP_003481751.1|	-	0.00012	21.3	0.5	0.047	12.8	0.1	3.2	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
K_oxygenase	PF13434.6	gi|289583341|ref|YP_003481751.1|	-	0.00032	20.0	0.0	0.014	14.6	0.0	2.2	2	0	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.6	gi|289583341|ref|YP_003481751.1|	-	0.0015	19.0	0.0	0.015	15.7	0.0	2.3	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_3	PF01494.19	gi|289583341|ref|YP_003481751.1|	-	0.0072	15.6	2.5	0.9	8.7	0.4	3.0	2	1	1	3	3	3	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|289583341|ref|YP_003481751.1|	-	0.015	14.6	0.2	0.48	9.7	0.2	2.2	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
MCRA	PF06100.11	gi|289583341|ref|YP_003481751.1|	-	0.22	10.3	0.1	0.39	9.4	0.0	1.4	2	0	0	2	2	2	0	MCRA	family
FMO-like	PF00743.19	gi|289583341|ref|YP_003481751.1|	-	0.26	9.6	0.0	5.1	5.4	0.0	2.0	2	0	0	2	2	2	0	Flavin-binding	monooxygenase-like
Usp	PF00582.26	gi|289583343|ref|YP_003481753.1|	-	1.5e-32	113.1	0.2	1.6e-32	112.9	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Glyoxalase_4	PF13669.6	gi|289583344|ref|YP_003481754.1|	-	8.7e-10	38.8	0.1	1.1e-07	32.1	0.2	2.0	1	1	1	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.25	gi|289583344|ref|YP_003481754.1|	-	3.7e-08	33.6	0.2	5.5e-08	33.1	0.2	1.3	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_6	PF18029.1	gi|289583344|ref|YP_003481754.1|	-	0.032	15.0	0.1	0.041	14.7	0.1	1.2	1	0	0	1	1	1	0	Glyoxalase-like	domain
MafB19-deam	PF14437.6	gi|289583345|ref|YP_003481755.1|	-	4.4e-16	58.9	0.0	4.9e-16	58.7	0.0	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
dCMP_cyt_deam_1	PF00383.23	gi|289583345|ref|YP_003481755.1|	-	2e-12	46.8	0.0	2.8e-12	46.4	0.0	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MazG_C	PF18722.1	gi|289583345|ref|YP_003481755.1|	-	0.00081	19.0	0.1	0.0012	18.4	0.1	1.2	1	0	0	1	1	1	1	MazG	C-terminal	domain
SNAD4	PF18750.1	gi|289583345|ref|YP_003481755.1|	-	0.0013	18.8	0.0	0.0019	18.3	0.0	1.2	1	0	0	1	1	1	1	Secreted	Novel	AID/APOBEC-like	Deaminase	4
NAD1	PF18778.1	gi|289583345|ref|YP_003481755.1|	-	0.0034	17.5	0.0	0.0047	17.0	0.0	1.1	1	0	0	1	1	1	1	Novel	AID	APOBEC	clade	1
APOBEC2	PF18772.1	gi|289583345|ref|YP_003481755.1|	-	0.025	14.6	0.0	0.034	14.2	0.0	1.1	1	0	0	1	1	1	0	APOBEC2
NAD2	PF18782.1	gi|289583345|ref|YP_003481755.1|	-	0.042	14.0	0.0	0.058	13.5	0.0	1.1	1	0	0	1	1	1	0	Novel	AID	APOBEC	clade	2
APOBEC_N	PF08210.11	gi|289583345|ref|YP_003481755.1|	-	0.099	12.5	0.0	0.12	12.3	0.0	1.1	1	0	0	1	1	1	0	APOBEC-like	N-terminal	domain
Peptidase_M42	PF05343.14	gi|289583346|ref|YP_003481756.1|	-	1.2e-69	234.6	0.1	1.5e-69	234.2	0.1	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|289583346|ref|YP_003481756.1|	-	1e-10	41.7	0.5	1.9e-10	40.8	0.5	1.4	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|289583346|ref|YP_003481756.1|	-	0.02	14.6	1.1	0.35	10.5	0.2	2.8	2	1	0	2	2	2	0	Peptidase	family	M28
SBP_bac_5	PF00496.22	gi|289583347|ref|YP_003481757.1|	-	3.9e-63	213.7	0.1	5.1e-63	213.3	0.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
TAT_signal	PF10518.9	gi|289583347|ref|YP_003481757.1|	-	3.3e-06	26.7	0.5	5.6e-06	26.0	0.5	1.4	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
SBP_bac_5	PF00496.22	gi|289583348|ref|YP_003481758.1|	-	1.3e-64	218.5	0.1	1.6e-64	218.2	0.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
TAT_signal	PF10518.9	gi|289583348|ref|YP_003481758.1|	-	2.6e-06	27.0	0.5	4.3e-06	26.3	0.5	1.4	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
BPD_transp_1	PF00528.22	gi|289583349|ref|YP_003481759.1|	-	2.1e-36	125.4	7.8	2.1e-36	125.4	7.8	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
GnHR_trans	PF12369.8	gi|289583349|ref|YP_003481759.1|	-	0.27	12.1	0.0	0.65	10.8	0.0	1.6	2	0	0	2	2	2	0	Gonadotropin	hormone	receptor	transmembrane	region
BPD_transp_1	PF00528.22	gi|289583350|ref|YP_003481760.1|	-	5.8e-31	107.7	12.3	5.8e-31	107.7	12.3	1.8	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|289583350|ref|YP_003481760.1|	-	0.0088	16.0	0.1	0.0088	16.0	0.1	3.3	3	0	0	3	3	3	2	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
ABC_tran	PF00005.27	gi|289583351|ref|YP_003481761.1|	-	2.3e-30	105.9	0.0	3.2e-30	105.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289583351|ref|YP_003481761.1|	-	1.9e-16	60.3	0.1	3.8e-16	59.4	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289583351|ref|YP_003481761.1|	-	6.4e-06	26.2	0.1	0.00012	22.0	0.0	2.0	1	1	1	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|289583351|ref|YP_003481761.1|	-	0.01	16.1	0.1	0.18	12.1	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289583351|ref|YP_003481761.1|	-	0.014	15.8	0.0	0.023	15.1	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|289583351|ref|YP_003481761.1|	-	0.11	12.2	0.1	16	5.1	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_29	PF13555.6	gi|289583351|ref|YP_003481761.1|	-	0.15	11.9	0.0	0.25	11.1	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_5	PF07728.14	gi|289583351|ref|YP_003481761.1|	-	0.16	12.0	0.0	0.29	11.1	0.0	1.5	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.27	gi|289583352|ref|YP_003481762.1|	-	3e-33	115.2	0.0	1.1e-32	113.4	0.0	1.8	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289583352|ref|YP_003481762.1|	-	9e-16	58.2	0.1	2e-15	57.0	0.1	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289583352|ref|YP_003481762.1|	-	3.2e-07	30.5	0.0	0.00076	19.4	0.0	2.2	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|289583352|ref|YP_003481762.1|	-	0.00081	19.7	0.1	0.052	13.8	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|289583352|ref|YP_003481762.1|	-	0.0051	17.2	0.1	0.038	14.4	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|289583352|ref|YP_003481762.1|	-	0.0086	16.0	0.0	0.017	15.0	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
ATP-synt_ab	PF00006.25	gi|289583352|ref|YP_003481762.1|	-	0.029	14.0	0.2	0.42	10.2	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|289583352|ref|YP_003481762.1|	-	0.031	14.0	0.1	0.068	12.9	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.12	gi|289583352|ref|YP_003481762.1|	-	0.033	14.1	0.1	0.22	11.4	0.1	2.2	2	0	0	2	2	2	0	NACHT	domain
MMR_HSR1	PF01926.23	gi|289583352|ref|YP_003481762.1|	-	0.033	14.3	0.0	0.067	13.3	0.0	1.5	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
NB-ARC	PF00931.22	gi|289583352|ref|YP_003481762.1|	-	0.062	12.5	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_23	PF13476.6	gi|289583352|ref|YP_003481762.1|	-	0.13	12.7	0.0	0.38	11.2	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|289583352|ref|YP_003481762.1|	-	0.23	11.9	0.0	0.42	11.0	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
Peptidase_S13	PF02113.15	gi|289583353|ref|YP_003481763.1|	-	3.8e-91	306.0	0.0	4.7e-91	305.7	0.0	1.0	1	0	0	1	1	1	1	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
Beta-lactamase2	PF13354.6	gi|289583353|ref|YP_003481763.1|	-	0.02	14.5	0.1	0.29	10.7	0.1	2.4	2	1	0	2	2	2	0	Beta-lactamase	enzyme	family
Peptidase_S11	PF00768.20	gi|289583353|ref|YP_003481763.1|	-	0.14	11.5	0.0	1.9	7.8	0.0	2.1	2	0	0	2	2	2	0	D-alanyl-D-alanine	carboxypeptidase
HTH_10	PF04967.12	gi|289583355|ref|YP_003481765.1|	-	9.8e-15	54.1	0.0	1.7e-14	53.4	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Orn_Arg_deC_N	PF02784.16	gi|289583356|ref|YP_003481766.1|	-	8.6e-50	169.4	0.0	1e-49	169.1	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|289583356|ref|YP_003481766.1|	-	1.6e-15	57.1	0.0	2e-15	56.8	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Ala_racemase_N	PF01168.20	gi|289583356|ref|YP_003481766.1|	-	7e-08	32.4	0.1	1.3e-07	31.5	0.1	1.4	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
NLPC_P60	PF00877.19	gi|289583357|ref|YP_003481767.1|	-	1.7e-21	76.2	0.0	2.7e-21	75.5	0.0	1.3	1	0	0	1	1	1	1	NlpC/P60	family
SH3_16	PF18348.1	gi|289583357|ref|YP_003481767.1|	-	5.5e-12	45.3	2.5	5.5e-12	45.3	2.5	2.3	3	0	0	3	3	3	1	Bacterial	dipeptidyl-peptidase	Sh3	domain
SH3_3	PF08239.11	gi|289583357|ref|YP_003481767.1|	-	2.7e-09	37.2	0.1	6e-09	36.1	0.1	1.6	1	0	0	1	1	1	1	Bacterial	SH3	domain
SH3_4	PF06347.13	gi|289583357|ref|YP_003481767.1|	-	2e-05	24.3	2.4	2.3e-05	24.1	0.3	2.3	2	0	0	2	2	2	1	Bacterial	SH3	domain
Peptidase_C92	PF05708.12	gi|289583357|ref|YP_003481767.1|	-	0.0031	17.6	0.0	0.0078	16.3	0.0	1.7	1	0	0	1	1	1	1	Permuted	papain-like	amidase	enzyme,	YaeF/YiiX,	C92	family
MR_MLE_C	PF13378.6	gi|289583358|ref|YP_003481768.1|	-	4.5e-47	160.5	2.1	6.1e-47	160.0	2.1	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|289583358|ref|YP_003481768.1|	-	8.9e-13	48.5	0.0	1.8e-12	47.5	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Beta-lactamase	PF00144.24	gi|289583359|ref|YP_003481769.1|	-	1e-41	143.3	0.7	1.4e-41	142.8	0.7	1.1	1	0	0	1	1	1	1	Beta-lactamase
Amidohydro_3	PF07969.11	gi|289583360|ref|YP_003481770.1|	-	6.1e-42	144.7	5.8	7.5e-42	144.4	5.8	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|289583360|ref|YP_003481770.1|	-	2.4e-11	43.6	0.2	0.0001	21.8	0.6	3.1	2	1	0	2	2	2	2	Amidohydrolase	family
Urease_alpha	PF00449.20	gi|289583360|ref|YP_003481770.1|	-	0.019	15.3	0.1	0.057	13.8	0.1	1.8	1	0	0	1	1	1	0	Urease	alpha-subunit,	N-terminal	domain
Dioxygenase_C	PF00775.21	gi|289583360|ref|YP_003481770.1|	-	0.084	12.3	0.0	0.2	11.1	0.0	1.6	1	0	0	1	1	1	0	Dioxygenase
Peptidase_S9	PF00326.21	gi|289583362|ref|YP_003481772.1|	-	1.9e-42	145.2	0.0	2.8e-42	144.6	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S15	PF02129.18	gi|289583362|ref|YP_003481772.1|	-	1e-11	45.0	0.0	2.5e-08	33.9	0.0	2.2	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.18	gi|289583362|ref|YP_003481772.1|	-	1.5e-10	41.0	0.0	2.4e-10	40.4	0.0	1.3	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.20	gi|289583362|ref|YP_003481772.1|	-	2.9e-09	37.0	0.1	5e-05	23.1	0.1	2.2	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
PD40	PF07676.12	gi|289583362|ref|YP_003481772.1|	-	1e-08	34.9	12.7	0.00081	19.3	0.2	6.6	5	1	2	7	7	7	2	WD40-like	Beta	Propeller	Repeat
Hydrolase_4	PF12146.8	gi|289583362|ref|YP_003481772.1|	-	1.6e-07	30.9	0.0	0.00027	20.3	0.0	2.2	2	0	0	2	2	2	2	Serine	aminopeptidase,	S33
AXE1	PF05448.12	gi|289583362|ref|YP_003481772.1|	-	7.3e-06	24.9	0.0	0.0011	17.7	0.0	2.2	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
BAAT_C	PF08840.11	gi|289583362|ref|YP_003481772.1|	-	0.00014	21.9	0.0	0.014	15.3	0.0	2.2	1	1	0	2	2	2	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DPPIV_N	PF00930.21	gi|289583362|ref|YP_003481772.1|	-	0.00079	18.3	0.0	0.3	9.8	0.0	3.4	1	1	1	2	2	2	1	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Abhydrolase_3	PF07859.13	gi|289583362|ref|YP_003481772.1|	-	0.0018	18.2	0.1	0.11	12.3	0.0	2.5	2	1	0	2	2	2	1	alpha/beta	hydrolase	fold
Esterase	PF00756.20	gi|289583362|ref|YP_003481772.1|	-	0.017	14.8	0.0	0.35	10.5	0.0	2.4	2	0	0	2	2	2	0	Putative	esterase
ANAPC4_WD40	PF12894.7	gi|289583362|ref|YP_003481772.1|	-	0.02	15.2	0.0	5.3	7.4	0.0	2.7	2	1	1	3	3	3	0	Anaphase-promoting	complex	subunit	4	WD40	domain
Peptidase_S28	PF05577.12	gi|289583362|ref|YP_003481772.1|	-	0.022	13.6	0.0	0.033	13.0	0.0	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
Abhydrolase_2	PF02230.16	gi|289583362|ref|YP_003481772.1|	-	0.027	14.3	0.0	6.7	6.5	0.0	2.1	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
PDE4_UCR	PF18100.1	gi|289583363|ref|YP_003481773.1|	-	0.11	13.1	0.0	0.14	12.8	0.0	1.1	1	0	0	1	1	1	0	Phosphodiesterase	4	upstream	conserved	regions	(UCR)
PI-PLC-X	PF00388.19	gi|289583364|ref|YP_003481774.1|	-	0.14	11.8	0.0	0.16	11.6	0.0	1.1	1	0	0	1	1	1	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
IclR	PF01614.18	gi|289583365|ref|YP_003481775.1|	-	3.5e-26	91.6	0.0	7.8e-26	90.4	0.0	1.5	1	0	0	1	1	1	1	Bacterial	transcriptional	regulator
HTH_IclR	PF09339.10	gi|289583365|ref|YP_003481775.1|	-	3.3e-08	33.2	1.4	7.7e-08	32.0	0.2	2.3	3	0	0	3	3	3	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583365|ref|YP_003481775.1|	-	9.8e-08	31.4	0.2	3.3e-07	29.7	0.2	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|289583365|ref|YP_003481775.1|	-	1.1e-05	25.2	0.4	5.3e-05	23.0	0.1	2.3	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|289583365|ref|YP_003481775.1|	-	1.5e-05	24.8	0.0	0.0013	18.6	0.0	2.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|289583365|ref|YP_003481775.1|	-	6e-05	22.9	0.5	0.00018	21.4	0.1	2.0	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.7	gi|289583365|ref|YP_003481775.1|	-	0.00028	20.7	0.3	0.019	14.8	0.1	2.5	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.7	gi|289583365|ref|YP_003481775.1|	-	0.00033	20.7	0.3	0.0011	18.9	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_27	PF13463.6	gi|289583365|ref|YP_003481775.1|	-	0.0038	17.7	0.2	0.0083	16.6	0.2	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.12	gi|289583365|ref|YP_003481775.1|	-	0.0047	16.8	0.2	0.013	15.5	0.2	1.8	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.12	gi|289583365|ref|YP_003481775.1|	-	0.01	15.6	0.1	0.019	14.7	0.1	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Penicillinase_R	PF03965.16	gi|289583365|ref|YP_003481775.1|	-	0.017	15.5	0.2	0.046	14.1	0.1	1.9	2	1	0	2	2	2	0	Penicillinase	repressor
HTH_10	PF04967.12	gi|289583365|ref|YP_003481775.1|	-	0.049	13.5	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
B-block_TFIIIC	PF04182.12	gi|289583365|ref|YP_003481775.1|	-	0.052	13.7	0.0	0.092	12.9	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_34	PF13601.6	gi|289583365|ref|YP_003481775.1|	-	0.13	12.4	0.0	0.3	11.3	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
LexA_DNA_bind	PF01726.16	gi|289583365|ref|YP_003481775.1|	-	0.15	11.9	0.0	0.34	10.7	0.0	1.6	1	0	0	1	1	1	0	LexA	DNA	binding	domain
ELFV_dehydrog	PF00208.21	gi|289583370|ref|YP_003481780.1|	-	1.8e-68	230.9	0.0	2.3e-68	230.6	0.0	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|289583370|ref|YP_003481780.1|	-	2.7e-55	185.8	0.0	4.6e-55	185.0	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.19	gi|289583370|ref|YP_003481780.1|	-	0.0025	17.2	0.0	0.0043	16.4	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Mycobact_memb	PF05423.13	gi|289583370|ref|YP_003481780.1|	-	0.016	15.1	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	Mycobacterium	membrane	protein
Bac_GDH	PF05088.12	gi|289583370|ref|YP_003481780.1|	-	0.32	8.4	0.2	0.46	7.9	0.2	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
HrcA_DNA-bdg	PF03444.15	gi|289583371|ref|YP_003481781.1|	-	2.2e-31	107.3	0.1	3.6e-31	106.7	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Rrf2	PF02082.20	gi|289583371|ref|YP_003481781.1|	-	7.4e-08	32.6	0.1	1.4e-07	31.7	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.12	gi|289583371|ref|YP_003481781.1|	-	0.00021	21.2	0.0	0.00038	20.3	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
LexA_DNA_bind	PF01726.16	gi|289583371|ref|YP_003481781.1|	-	0.0064	16.2	0.0	1.2	8.9	0.0	2.5	2	0	0	2	2	2	2	LexA	DNA	binding	domain
Rio2_N	PF09202.11	gi|289583371|ref|YP_003481781.1|	-	0.012	15.8	0.0	0.023	14.9	0.0	1.4	1	0	0	1	1	1	0	Rio2,	N-terminal
DDRGK	PF09756.9	gi|289583371|ref|YP_003481781.1|	-	0.033	13.8	0.0	0.05	13.2	0.0	1.3	1	0	0	1	1	1	0	DDRGK	domain
TrmB	PF01978.19	gi|289583371|ref|YP_003481781.1|	-	0.089	12.7	0.0	0.32	10.9	0.0	1.9	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
TrkA_N	PF02254.18	gi|289583372|ref|YP_003481782.1|	-	8.6e-45	151.7	7.5	1.5e-25	89.7	1.1	3.0	3	0	0	3	3	3	2	TrkA-N	domain
TrkA_C	PF02080.21	gi|289583372|ref|YP_003481782.1|	-	8.5e-22	76.8	7.9	3e-10	39.8	0.6	3.8	3	1	0	3	3	3	2	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|289583372|ref|YP_003481782.1|	-	5.9e-10	39.5	3.5	5.2e-08	33.3	0.9	2.7	3	0	0	3	3	2	1	Putative	NAD(P)-binding
NAD_binding_10	PF13460.6	gi|289583372|ref|YP_003481782.1|	-	6.6e-09	35.9	1.2	0.0018	18.2	0.2	3.1	2	1	0	3	3	3	2	NAD(P)H-binding
Shikimate_DH	PF01488.20	gi|289583372|ref|YP_003481782.1|	-	2.7e-08	33.9	2.0	0.00083	19.4	0.2	2.8	3	0	0	3	3	3	2	Shikimate	/	quinate	5-dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|289583372|ref|YP_003481782.1|	-	3.6e-07	30.5	0.8	6.8e-05	23.1	0.7	2.7	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
Pyr_redox_2	PF07992.14	gi|289583372|ref|YP_003481782.1|	-	5.5e-05	22.5	0.1	0.00016	21.0	0.1	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.16	gi|289583372|ref|YP_003481782.1|	-	0.00017	21.2	0.2	0.0029	17.3	0.1	2.3	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
NmrA	PF05368.13	gi|289583372|ref|YP_003481782.1|	-	0.00022	20.8	2.3	0.048	13.2	0.0	2.9	2	1	1	3	3	3	1	NmrA-like	family
UDPG_MGDP_dh_N	PF03721.14	gi|289583372|ref|YP_003481782.1|	-	0.00079	19.0	0.5	0.00079	19.0	0.5	2.2	3	1	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|289583372|ref|YP_003481782.1|	-	0.001	18.4	2.3	0.1	11.9	0.0	2.3	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.17	gi|289583372|ref|YP_003481782.1|	-	0.0014	19.2	1.9	0.028	15.0	0.1	3.5	2	2	2	4	4	4	1	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_binding_3	PF01494.19	gi|289583372|ref|YP_003481782.1|	-	0.002	17.5	0.3	0.67	9.1	0.1	2.8	3	0	0	3	3	3	1	FAD	binding	domain
3HCDH_N	PF02737.18	gi|289583372|ref|YP_003481782.1|	-	0.0022	17.9	1.4	0.37	10.7	0.2	2.6	3	0	0	3	3	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|289583372|ref|YP_003481782.1|	-	0.0036	17.8	2.0	0.82	10.3	0.0	3.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
adh_short	PF00106.25	gi|289583372|ref|YP_003481782.1|	-	0.01	15.3	1.2	0.1	12.0	0.0	2.6	3	0	0	3	3	3	0	short	chain	dehydrogenase
AdoHcyase_NAD	PF00670.21	gi|289583372|ref|YP_003481782.1|	-	0.02	15.0	1.3	0.24	11.4	1.5	2.4	2	0	0	2	2	2	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Rossmann-like	PF10727.9	gi|289583372|ref|YP_003481782.1|	-	0.034	14.0	1.6	3.4	7.5	0.3	2.5	2	0	0	2	2	2	0	Rossmann-like	domain
AA_kinase	PF00696.28	gi|289583372|ref|YP_003481782.1|	-	0.12	11.9	1.2	0.41	10.2	0.0	2.2	2	1	0	2	2	2	0	Amino	acid	kinase	family
NAD_Gly3P_dh_N	PF01210.23	gi|289583372|ref|YP_003481782.1|	-	0.14	12.2	0.1	1.1	9.3	0.0	2.5	3	0	0	3	3	3	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Nodulin	PF02451.15	gi|289583372|ref|YP_003481782.1|	-	0.14	11.6	0.0	0.31	10.5	0.0	1.5	1	0	0	1	1	1	0	Nodulin
DUF2325	PF10087.9	gi|289583372|ref|YP_003481782.1|	-	0.16	12.1	0.0	0.95	9.6	0.0	2.5	3	0	0	3	3	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
YflT	PF11181.8	gi|289583372|ref|YP_003481782.1|	-	0.74	10.4	3.8	5.1	7.7	0.0	3.3	3	1	1	4	4	3	0	Heat	induced	stress	protein	YflT
MatE	PF01554.18	gi|289583373|ref|YP_003481783.1|	-	4.3e-31	107.8	32.1	2.1e-20	73.0	8.5	2.8	3	1	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|289583373|ref|YP_003481783.1|	-	5e-05	23.4	6.6	5e-05	23.4	6.6	3.6	4	2	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Bac_GH3_C	PF18034.1	gi|289583373|ref|YP_003481783.1|	-	0.073	12.8	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Bacterial	Glycosyl	hydrolase	family	3	C-terminal	domain
MatE	PF01554.18	gi|289583375|ref|YP_003481785.1|	-	2.9e-57	192.8	32.9	3.3e-35	121.1	16.1	2.5	2	0	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.6	gi|289583375|ref|YP_003481785.1|	-	0.00015	21.8	38.9	0.013	15.5	16.9	4.8	3	2	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|289583375|ref|YP_003481785.1|	-	0.16	10.5	23.4	0.1	11.2	13.5	2.6	2	2	0	2	2	2	0	Lipid	II	flippase	MurJ
RVT_3	PF13456.6	gi|289583376|ref|YP_003481786.1|	-	7.7e-10	38.7	0.0	9.9e-10	38.3	0.0	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.24	gi|289583376|ref|YP_003481786.1|	-	2.1e-08	34.5	0.0	4.2e-08	33.5	0.0	1.5	1	0	0	1	1	1	1	RNase	H
Response_reg	PF00072.24	gi|289583377|ref|YP_003481787.1|	-	3.9e-19	68.9	0.0	4.5e-19	68.7	0.0	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Hydrolase_4	PF12146.8	gi|289583378|ref|YP_003481788.1|	-	7.5e-05	22.1	0.0	0.016	14.5	0.0	2.7	1	1	1	2	2	2	2	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|289583378|ref|YP_003481788.1|	-	0.00035	21.3	2.0	0.017	15.8	0.9	2.0	1	1	1	2	2	2	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.20	gi|289583378|ref|YP_003481788.1|	-	0.0012	18.6	0.0	0.0049	16.5	0.0	1.8	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
DLH	PF01738.18	gi|289583378|ref|YP_003481788.1|	-	0.0091	15.6	0.0	0.011	15.3	0.0	1.1	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
BAAT_C	PF08840.11	gi|289583378|ref|YP_003481788.1|	-	0.14	12.1	0.0	0.61	10.0	0.0	1.8	1	1	1	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Usp	PF00582.26	gi|289583379|ref|YP_003481789.1|	-	2.1e-52	177.4	6.6	7.1e-28	97.9	1.2	2.0	2	0	0	2	2	2	2	Universal	stress	protein	family
Toprim_3	PF13362.6	gi|289583379|ref|YP_003481789.1|	-	0.00056	20.2	3.8	0.0081	16.5	1.6	2.6	3	0	0	3	3	3	1	Toprim	domain
Mur_ligase	PF01225.25	gi|289583379|ref|YP_003481789.1|	-	0.0093	16.3	0.2	0.97	9.8	0.0	2.7	2	1	1	3	3	3	1	Mur	ligase	family,	catalytic	domain
HTH_20	PF12840.7	gi|289583381|ref|YP_003481791.1|	-	2.8e-06	27.3	0.2	9.8e-06	25.5	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|289583381|ref|YP_003481791.1|	-	0.00043	20.1	0.1	0.00093	19.0	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_40	PF14493.6	gi|289583381|ref|YP_003481791.1|	-	0.0095	16.4	0.1	0.024	15.1	0.1	2.0	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583381|ref|YP_003481791.1|	-	0.014	15.0	0.0	0.031	13.8	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|289583381|ref|YP_003481791.1|	-	0.015	15.1	0.0	0.029	14.3	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|289583381|ref|YP_003481791.1|	-	0.019	14.8	0.0	0.042	13.6	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
GerE	PF00196.19	gi|289583381|ref|YP_003481791.1|	-	0.027	14.0	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.12	gi|289583381|ref|YP_003481791.1|	-	0.077	12.7	0.1	0.3	10.8	0.0	1.8	2	0	0	2	2	2	0	Sigma-70,	region	4
Rrf2	PF02082.20	gi|289583381|ref|YP_003481791.1|	-	0.13	12.6	0.0	0.22	11.9	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_5	PF01022.20	gi|289583381|ref|YP_003481791.1|	-	0.15	12.0	0.0	0.26	11.2	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|289583385|ref|YP_003481795.1|	-	0.00012	21.6	0.1	0.00034	20.1	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.10	gi|289583385|ref|YP_003481795.1|	-	0.00026	20.7	0.0	0.00054	19.7	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TetR_N	PF00440.23	gi|289583385|ref|YP_003481795.1|	-	0.0021	17.8	0.0	0.0039	16.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
FUR	PF01475.19	gi|289583385|ref|YP_003481795.1|	-	0.0022	18.1	0.1	0.0032	17.6	0.1	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.7	gi|289583385|ref|YP_003481795.1|	-	0.0032	17.5	0.0	0.0067	16.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|289583385|ref|YP_003481795.1|	-	0.0076	16.1	0.0	0.014	15.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|289583385|ref|YP_003481795.1|	-	0.01	16.3	0.0	0.025	15.1	0.0	1.7	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_23	PF13384.6	gi|289583385|ref|YP_003481795.1|	-	0.044	13.6	0.0	0.16	11.8	0.0	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_11	PF08279.12	gi|289583385|ref|YP_003481795.1|	-	0.046	13.7	0.1	0.079	12.9	0.1	1.3	1	0	0	1	1	1	0	HTH	domain
HTH_5	PF01022.20	gi|289583385|ref|YP_003481795.1|	-	0.06	13.2	0.0	0.17	11.8	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Phage_rep_O	PF04492.13	gi|289583385|ref|YP_003481795.1|	-	0.066	13.8	0.1	0.12	12.9	0.1	1.5	1	1	0	1	1	1	0	Bacteriophage	replication	protein	O
TrmB	PF01978.19	gi|289583385|ref|YP_003481795.1|	-	0.07	13.0	0.0	0.13	12.1	0.0	1.5	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_AraC	PF00165.23	gi|289583385|ref|YP_003481795.1|	-	0.11	12.6	0.1	0.21	11.7	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
Mrr_N	PF14338.6	gi|289583388|ref|YP_003481798.1|	-	0.0022	18.1	0.0	0.0033	17.5	0.0	1.4	1	0	0	1	1	1	1	Mrr	N-terminal	domain
HTH_20	PF12840.7	gi|289583388|ref|YP_003481798.1|	-	0.0023	18.0	0.0	0.0032	17.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|289583388|ref|YP_003481798.1|	-	0.0053	16.7	0.0	0.0061	16.5	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.19	gi|289583388|ref|YP_003481798.1|	-	0.02	15.1	0.1	0.052	13.7	0.0	1.7	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.9	gi|289583388|ref|YP_003481798.1|	-	0.025	14.7	0.3	0.31	11.2	0.1	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_Crp_2	PF13545.6	gi|289583388|ref|YP_003481798.1|	-	0.058	13.4	0.0	0.076	13.0	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF4364	PF14277.6	gi|289583388|ref|YP_003481798.1|	-	0.058	13.1	0.0	0.072	12.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.19	gi|289583388|ref|YP_003481798.1|	-	0.07	13.0	0.1	0.17	11.8	0.0	1.6	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF505	PF04458.12	gi|289583388|ref|YP_003481798.1|	-	0.13	10.7	0.0	0.13	10.7	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
HTH_IclR	PF09339.10	gi|289583388|ref|YP_003481798.1|	-	0.14	12.0	0.1	0.37	10.6	0.1	1.6	1	1	0	1	1	1	0	IclR	helix-turn-helix	domain
Spc7	PF08317.11	gi|289583389|ref|YP_003481799.1|	-	8e-05	21.7	8.2	0.00013	21.0	8.2	1.3	1	0	0	1	1	1	1	Spc7	kinetochore	protein
FPP	PF05911.11	gi|289583389|ref|YP_003481799.1|	-	0.00018	19.9	6.1	0.00021	19.6	6.1	1.1	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
Spc29	PF17082.5	gi|289583389|ref|YP_003481799.1|	-	0.0002	21.3	0.7	0.00034	20.6	0.7	1.5	1	0	0	1	1	1	1	Spindle	Pole	Component	29
Fez1	PF06818.15	gi|289583389|ref|YP_003481799.1|	-	0.0014	19.1	7.7	0.003	18.0	7.7	1.5	1	0	0	1	1	1	1	Fez1
GAS	PF13851.6	gi|289583389|ref|YP_003481799.1|	-	0.0031	16.9	8.0	0.0053	16.1	8.0	1.4	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
UPF0242	PF06785.11	gi|289583389|ref|YP_003481799.1|	-	0.0067	16.5	7.8	0.011	15.9	7.8	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
HOOK	PF05622.12	gi|289583389|ref|YP_003481799.1|	-	0.0082	14.3	5.4	0.012	13.8	5.4	1.2	1	0	0	1	1	1	1	HOOK	protein
KLRAQ	PF10205.9	gi|289583389|ref|YP_003481799.1|	-	0.0084	16.3	4.6	0.0084	16.3	4.6	1.9	2	0	0	2	2	1	1	Predicted	coiled-coil	domain-containing	protein
DUF812	PF05667.11	gi|289583389|ref|YP_003481799.1|	-	0.012	14.5	10.9	0.017	14.0	10.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
DUF4795	PF16043.5	gi|289583389|ref|YP_003481799.1|	-	0.014	15.0	3.0	0.027	14.1	3.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
MscS_porin	PF12795.7	gi|289583389|ref|YP_003481799.1|	-	0.014	14.9	15.4	0.061	12.9	14.7	1.8	1	1	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
DUF641	PF04859.12	gi|289583389|ref|YP_003481799.1|	-	0.016	15.5	1.3	0.016	15.5	1.3	2.6	3	0	0	3	3	2	0	Plant	protein	of	unknown	function	(DUF641)
SHE3	PF17078.5	gi|289583389|ref|YP_003481799.1|	-	0.017	14.8	4.9	0.026	14.2	4.9	1.3	1	0	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
Fib_alpha	PF08702.10	gi|289583389|ref|YP_003481799.1|	-	0.028	14.6	1.7	0.063	13.5	1.7	1.7	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
FapA	PF03961.13	gi|289583389|ref|YP_003481799.1|	-	0.03	12.9	1.7	0.044	12.4	1.7	1.2	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Atg14	PF10186.9	gi|289583389|ref|YP_003481799.1|	-	0.034	13.2	9.8	0.078	12.1	9.7	1.6	1	1	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Phage_GP20	PF06810.11	gi|289583389|ref|YP_003481799.1|	-	0.041	13.7	3.3	0.092	12.6	3.3	1.6	1	0	0	1	1	1	0	Phage	minor	structural	protein	GP20
CENP-F_N	PF10481.9	gi|289583389|ref|YP_003481799.1|	-	0.044	13.4	6.4	0.049	13.3	5.3	1.6	1	1	0	1	1	1	0	Cenp-F	N-terminal	domain
Herpes_UL6	PF01763.16	gi|289583389|ref|YP_003481799.1|	-	0.048	12.2	2.7	0.068	11.7	2.7	1.2	1	0	0	1	1	1	0	Herpesvirus	UL6	like
Snapin_Pallidin	PF14712.6	gi|289583389|ref|YP_003481799.1|	-	0.053	13.9	5.5	0.21	12.1	4.9	2.3	1	1	1	2	2	2	0	Snapin/Pallidin
Golgin_A5	PF09787.9	gi|289583389|ref|YP_003481799.1|	-	0.058	12.8	8.1	0.018	14.5	5.3	1.6	2	0	0	2	2	1	0	Golgin	subfamily	A	member	5
YabA	PF06156.13	gi|289583389|ref|YP_003481799.1|	-	0.068	13.8	5.7	0.14	12.8	5.7	1.5	1	0	0	1	1	1	0	Initiation	control	protein	YabA
DUF1664	PF07889.12	gi|289583389|ref|YP_003481799.1|	-	0.079	13.0	2.3	0.18	11.8	2.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
SKA1	PF07160.12	gi|289583389|ref|YP_003481799.1|	-	0.081	12.8	6.3	0.16	11.8	6.3	1.5	1	1	0	1	1	1	0	Spindle	and	kinetochore-associated	protein	1
Fmp27_WPPW	PF10359.9	gi|289583389|ref|YP_003481799.1|	-	0.083	11.7	5.6	0.12	11.3	5.6	1.2	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
FAM76	PF16046.5	gi|289583389|ref|YP_003481799.1|	-	0.1	11.9	8.6	0.14	11.5	8.6	1.2	1	0	0	1	1	1	0	FAM76	protein
NPV_P10	PF05531.12	gi|289583389|ref|YP_003481799.1|	-	0.12	12.8	2.0	11	6.6	0.1	2.6	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Tropomyosin_1	PF12718.7	gi|289583389|ref|YP_003481799.1|	-	0.12	12.5	18.7	0.087	13.0	15.5	2.0	1	1	0	1	1	1	0	Tropomyosin	like
ERM	PF00769.19	gi|289583389|ref|YP_003481799.1|	-	0.13	12.1	15.3	0.27	11.0	15.3	1.5	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
MIF4G_like_2	PF09090.11	gi|289583389|ref|YP_003481799.1|	-	0.15	11.5	6.4	0.065	12.7	3.8	1.6	2	0	0	2	2	1	0	MIF4G	like
Macoilin	PF09726.9	gi|289583389|ref|YP_003481799.1|	-	0.19	10.2	5.9	0.26	9.8	5.9	1.1	1	0	0	1	1	1	0	Macoilin	family
DivIC	PF04977.15	gi|289583389|ref|YP_003481799.1|	-	0.19	11.5	11.7	0.039	13.7	4.5	2.7	1	1	2	3	3	3	0	Septum	formation	initiator
Rx_N	PF18052.1	gi|289583389|ref|YP_003481799.1|	-	0.19	12.0	2.9	0.46	10.8	2.9	1.7	1	0	0	1	1	1	0	Rx	N-terminal	domain
CENP-F_leu_zip	PF10473.9	gi|289583389|ref|YP_003481799.1|	-	0.21	11.6	15.0	0.8	9.7	15.1	1.7	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Jnk-SapK_ap_N	PF09744.9	gi|289583389|ref|YP_003481799.1|	-	0.22	11.7	14.1	0.46	10.7	14.1	1.4	1	0	0	1	1	1	0	JNK_SAPK-associated	protein-1
EMP24_GP25L	PF01105.24	gi|289583389|ref|YP_003481799.1|	-	0.23	11.4	1.7	0.49	10.3	1.7	1.5	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
DUF2205	PF10224.9	gi|289583389|ref|YP_003481799.1|	-	0.24	11.4	6.0	0.12	12.4	2.8	2.1	1	1	1	2	2	2	0	Short	coiled-coil	protein
TMPIT	PF07851.13	gi|289583389|ref|YP_003481799.1|	-	0.25	10.6	2.0	0.34	10.1	2.0	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
V_ATPase_I	PF01496.19	gi|289583389|ref|YP_003481799.1|	-	0.27	9.1	4.3	0.35	8.7	4.3	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
FlaC_arch	PF05377.11	gi|289583389|ref|YP_003481799.1|	-	0.28	11.6	9.9	0.65	10.4	3.1	3.3	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DUF3450	PF11932.8	gi|289583389|ref|YP_003481799.1|	-	0.29	10.4	7.3	0.25	10.6	5.2	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
ADIP	PF11559.8	gi|289583389|ref|YP_003481799.1|	-	0.31	11.1	14.4	0.089	12.9	8.5	2.1	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
TMF_TATA_bd	PF12325.8	gi|289583389|ref|YP_003481799.1|	-	0.32	11.2	12.1	0.7	10.1	11.8	1.7	2	0	0	2	2	1	0	TATA	element	modulatory	factor	1	TATA	binding
XhlA	PF10779.9	gi|289583389|ref|YP_003481799.1|	-	0.4	10.9	11.0	0.69	10.2	5.2	2.5	2	0	0	2	2	2	0	Haemolysin	XhlA
Exonuc_VII_L	PF02601.15	gi|289583389|ref|YP_003481799.1|	-	0.41	10.2	11.2	0.38	10.3	9.2	1.6	1	1	0	2	2	2	0	Exonuclease	VII,	large	subunit
CLZ	PF16526.5	gi|289583389|ref|YP_003481799.1|	-	0.5	10.8	9.6	0.28	11.6	5.7	2.4	2	0	0	2	2	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
HALZ	PF02183.18	gi|289583389|ref|YP_003481799.1|	-	0.5	10.6	4.9	1.5	9.1	0.5	2.4	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
CC2-LZ	PF16516.5	gi|289583389|ref|YP_003481799.1|	-	0.53	10.7	9.3	1.3	9.5	2.6	2.4	1	1	1	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
HemX	PF04375.14	gi|289583389|ref|YP_003481799.1|	-	0.55	9.5	8.9	0.17	11.1	3.6	2.0	1	1	1	2	2	2	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
DUF4763	PF15960.5	gi|289583389|ref|YP_003481799.1|	-	0.57	9.4	8.8	4.5	6.5	2.9	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4763)
BLOC1_2	PF10046.9	gi|289583389|ref|YP_003481799.1|	-	0.57	10.5	6.1	0.72	10.2	3.3	2.1	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
bZIP_1	PF00170.21	gi|289583389|ref|YP_003481799.1|	-	0.65	10.1	14.4	0.078	13.1	2.8	3.5	2	1	1	3	3	3	0	bZIP	transcription	factor
Tmemb_cc2	PF10267.9	gi|289583389|ref|YP_003481799.1|	-	0.65	9.1	10.4	1.1	8.3	10.4	1.5	1	1	0	1	1	1	0	Predicted	transmembrane	and	coiled-coil	2	protein
DUF4407	PF14362.6	gi|289583389|ref|YP_003481799.1|	-	0.67	9.3	12.4	1.4	8.2	12.4	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
COG2	PF06148.11	gi|289583389|ref|YP_003481799.1|	-	0.67	10.0	5.1	1.8	8.7	4.8	1.8	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
RPW8	PF05659.11	gi|289583389|ref|YP_003481799.1|	-	0.69	9.6	4.3	0.52	10.0	1.8	1.9	1	1	1	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
ATG16	PF08614.11	gi|289583389|ref|YP_003481799.1|	-	0.71	10.1	20.4	2.4	8.3	20.3	1.8	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
Prefoldin_2	PF01920.20	gi|289583389|ref|YP_003481799.1|	-	0.71	9.9	10.6	0.18	11.7	3.2	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
DUF4140	PF13600.6	gi|289583389|ref|YP_003481799.1|	-	0.74	10.3	18.9	0.54	10.7	6.6	3.4	2	1	1	3	3	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
SprA-related	PF12118.8	gi|289583389|ref|YP_003481799.1|	-	0.91	8.6	16.3	2.2	7.4	16.3	1.6	1	1	0	1	1	1	0	SprA-related	family
Uso1_p115_C	PF04871.13	gi|289583389|ref|YP_003481799.1|	-	0.98	9.8	13.3	2.4	8.6	13.0	1.8	1	1	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
BRE1	PF08647.11	gi|289583389|ref|YP_003481799.1|	-	1	9.4	10.7	3.1	7.9	10.7	1.8	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
Syntaxin-6_N	PF09177.11	gi|289583389|ref|YP_003481799.1|	-	1.1	9.8	9.3	1.2	9.8	7.1	2.2	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
ZapB	PF06005.12	gi|289583389|ref|YP_003481799.1|	-	1.6	9.2	14.2	0.45	11.0	9.8	2.0	1	1	1	2	2	2	0	Cell	division	protein	ZapB
ABC_tran_CTD	PF16326.5	gi|289583389|ref|YP_003481799.1|	-	1.7	9.0	18.7	0.37	11.1	2.4	3.1	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
DUF2730	PF10805.8	gi|289583389|ref|YP_003481799.1|	-	1.8	8.7	5.5	2.9	8.0	3.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2730)
AAA_13	PF13166.6	gi|289583389|ref|YP_003481799.1|	-	2	6.9	8.5	3.8	6.0	8.5	1.4	1	1	0	1	1	1	0	AAA	domain
Med9	PF07544.13	gi|289583389|ref|YP_003481799.1|	-	2	8.5	6.3	1.1	9.4	2.6	2.4	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
PspB	PF06667.12	gi|289583389|ref|YP_003481799.1|	-	2.1	8.4	10.0	0.94	9.6	0.5	3.1	1	1	1	2	2	2	0	Phage	shock	protein	B
Spc24	PF08286.11	gi|289583389|ref|YP_003481799.1|	-	2.5	8.4	14.4	9.4	6.5	5.0	3.1	1	1	2	3	3	3	0	Spc24	subunit	of	Ndc80
BMFP	PF04380.13	gi|289583389|ref|YP_003481799.1|	-	2.7	8.5	16.6	0.22	12.0	2.7	3.9	1	1	1	3	3	3	0	Membrane	fusogenic	activity
DUF5082	PF16888.5	gi|289583389|ref|YP_003481799.1|	-	2.8	8.3	10.1	0.37	11.1	2.7	2.5	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF5082)
Bcr-Abl_Oligo	PF09036.10	gi|289583389|ref|YP_003481799.1|	-	4.2	7.4	5.2	11	6.1	1.1	2.9	1	1	2	3	3	3	0	Bcr-Abl	oncoprotein	oligomerisation	domain
HAUS-augmin3	PF14932.6	gi|289583389|ref|YP_003481799.1|	-	4.3	6.8	12.3	12	5.4	11.7	1.6	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
Sugarporin_N	PF11471.8	gi|289583389|ref|YP_003481799.1|	-	4.8	7.2	25.9	0.18	11.8	6.3	3.4	2	1	1	3	3	3	0	Maltoporin	periplasmic	N-terminal	extension
GrpE	PF01025.19	gi|289583389|ref|YP_003481799.1|	-	5.2	6.7	11.6	1.1	8.9	6.5	2.2	1	1	1	2	2	2	0	GrpE
APG6_N	PF17675.1	gi|289583389|ref|YP_003481799.1|	-	6.2	7.4	18.3	21	5.6	18.3	1.9	1	1	0	1	1	1	0	Apg6	coiled-coil	region
OmpH	PF03938.14	gi|289583389|ref|YP_003481799.1|	-	6.9	7.0	8.7	15	5.9	8.7	1.5	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Csm1_N	PF18504.1	gi|289583389|ref|YP_003481799.1|	-	7.1	7.1	12.8	5.4	7.4	5.9	3.1	1	1	1	3	3	3	0	Csm1	N-terminal	domain
CBS	PF00571.28	gi|289583391|ref|YP_003481801.1|	-	3.4e-18	65.8	4.8	2.3e-11	44.0	0.9	2.1	2	0	0	2	2	2	2	CBS	domain
TmoB	PF06234.12	gi|289583391|ref|YP_003481801.1|	-	0.15	12.1	2.6	0.12	12.5	0.5	2.0	2	1	0	2	2	2	0	Toluene-4-monooxygenase	system	protein	B	(TmoB)
Glyoxalase	PF00903.25	gi|289583392|ref|YP_003481802.1|	-	2.4e-16	60.1	0.0	9.8e-09	35.5	0.0	2.3	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_6	PF18029.1	gi|289583392|ref|YP_003481802.1|	-	5.3e-06	27.2	1.7	2.1e-05	25.3	0.0	2.5	2	1	0	2	2	2	1	Glyoxalase-like	domain
DUF4774	PF15999.5	gi|289583392|ref|YP_003481802.1|	-	0.041	13.7	0.0	0.11	12.3	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4774)
Glyoxalase_3	PF13468.6	gi|289583392|ref|YP_003481802.1|	-	1	9.5	5.6	6.5	6.8	3.6	3.2	3	1	0	3	3	3	0	Glyoxalase-like	domain
HalOD1	PF18545.1	gi|289583393|ref|YP_003481803.1|	-	1.8e-25	89.0	0.7	1.9e-25	88.9	0.7	1.0	1	0	0	1	1	1	1	Halobacterial	output	domain	1
DrsE_2	PF13686.6	gi|289583394|ref|YP_003481804.1|	-	3.2e-51	173.2	0.3	4e-51	172.9	0.3	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.15	gi|289583394|ref|YP_003481804.1|	-	2e-06	28.2	0.0	5.9e-06	26.6	0.0	1.7	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DivIC	PF04977.15	gi|289583394|ref|YP_003481804.1|	-	0.21	11.4	0.7	0.4	10.5	0.7	1.4	1	0	0	1	1	1	0	Septum	formation	initiator
HSBP1	PF06825.12	gi|289583394|ref|YP_003481804.1|	-	0.23	11.3	0.3	0.23	11.3	0.3	2.1	2	1	0	2	2	2	0	Heat	shock	factor	binding	protein	1
TusA	PF01206.17	gi|289583395|ref|YP_003481805.1|	-	8.7e-20	70.3	0.0	9.9e-20	70.2	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.9	gi|289583395|ref|YP_003481805.1|	-	0.0073	16.2	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
Lactamase_B	PF00753.27	gi|289583396|ref|YP_003481806.1|	-	2.2e-11	44.1	9.4	5.7e-11	42.8	9.4	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Rhodanese	PF00581.20	gi|289583396|ref|YP_003481806.1|	-	2.5e-10	40.8	0.0	4.7e-10	39.9	0.0	1.5	1	0	0	1	1	1	1	Rhodanese-like	domain
Lactamase_B_2	PF12706.7	gi|289583396|ref|YP_003481806.1|	-	0.016	14.7	0.2	0.031	13.8	0.2	1.5	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Sulf_transp	PF04143.14	gi|289583397|ref|YP_003481807.1|	-	1.8e-10	40.9	19.7	2.2e-09	37.3	19.7	2.2	1	1	0	1	1	1	1	Sulphur	transport
DUF4282	PF14110.6	gi|289583397|ref|YP_003481807.1|	-	2.9	8.7	9.7	5.1	7.9	5.6	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4282)
Sulf_transp	PF04143.14	gi|289583398|ref|YP_003481808.1|	-	9.5e-08	32.0	9.5	9.5e-08	32.0	9.5	2.1	1	1	1	2	2	2	1	Sulphur	transport
E1-E2_ATPase	PF00122.20	gi|289583400|ref|YP_003481810.1|	-	1.1e-50	171.7	0.2	1.1e-50	171.7	0.2	1.7	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|289583400|ref|YP_003481810.1|	-	4e-43	148.2	3.3	6e-43	147.6	3.3	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|289583400|ref|YP_003481810.1|	-	6.5e-06	26.7	0.2	6.3e-05	23.5	0.1	2.5	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|289583400|ref|YP_003481810.1|	-	0.00066	19.5	0.4	0.048	13.4	0.2	2.4	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
ZnuA	PF01297.17	gi|289583400|ref|YP_003481810.1|	-	0.011	15.1	0.0	0.022	14.2	0.0	1.4	1	0	0	1	1	1	0	Zinc-uptake	complex	component	A	periplasmic
Methyltransf_11	PF08241.12	gi|289583401|ref|YP_003481811.1|	-	9.8e-17	61.4	0.0	1.7e-16	60.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289583401|ref|YP_003481811.1|	-	4.3e-15	56.2	0.0	2e-14	54.1	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289583401|ref|YP_003481811.1|	-	1.6e-08	34.5	0.0	2e-08	34.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289583401|ref|YP_003481811.1|	-	3.3e-05	23.4	0.0	4.9e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|289583401|ref|YP_003481811.1|	-	0.00083	19.2	0.0	0.0027	17.6	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.12	gi|289583401|ref|YP_003481811.1|	-	0.0037	16.4	0.0	0.0057	15.8	0.0	1.2	1	0	0	1	1	1	1	DREV	methyltransferase
MTS	PF05175.14	gi|289583401|ref|YP_003481811.1|	-	0.026	14.1	0.0	0.11	12.0	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_12	PF08242.12	gi|289583401|ref|YP_003481811.1|	-	0.04	14.7	0.0	0.13	13.0	0.0	1.9	2	1	0	2	2	2	0	Methyltransferase	domain
RrnaAD	PF00398.20	gi|289583401|ref|YP_003481811.1|	-	0.27	10.3	0.0	0.33	10.0	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
DsbD	PF02683.15	gi|289583402|ref|YP_003481812.1|	-	1.2e-10	41.6	14.4	1.9e-10	41.0	14.4	1.2	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
Redoxin	PF08534.10	gi|289583403|ref|YP_003481813.1|	-	2.1e-08	34.0	0.0	2.5e-08	33.8	0.0	1.1	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.21	gi|289583403|ref|YP_003481813.1|	-	3.7e-06	26.8	0.0	5.2e-06	26.4	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin	PF00085.20	gi|289583403|ref|YP_003481813.1|	-	2.3e-05	24.3	0.0	7.6e-05	22.6	0.0	1.7	2	0	0	2	2	2	1	Thioredoxin
Thioredoxin_8	PF13905.6	gi|289583403|ref|YP_003481813.1|	-	0.0013	19.0	0.0	0.0024	18.2	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin-like
DUF953	PF06110.11	gi|289583403|ref|YP_003481813.1|	-	0.059	13.0	0.0	0.097	12.3	0.0	1.3	1	0	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF953)
SCO1-SenC	PF02630.14	gi|289583404|ref|YP_003481814.1|	-	1.1e-15	57.7	0.0	1.7e-15	57.1	0.0	1.2	1	0	0	1	1	1	1	SCO1/SenC
Redoxin	PF08534.10	gi|289583404|ref|YP_003481814.1|	-	0.068	12.9	0.0	0.22	11.2	0.0	1.9	1	1	0	1	1	1	0	Redoxin
Corona_NS3b	PF03053.14	gi|289583405|ref|YP_003481815.1|	-	0.023	14.4	0.2	0.028	14.2	0.1	1.2	1	1	0	1	1	1	0	ORF3b	coronavirus	protein
DUF5381	PF17353.2	gi|289583405|ref|YP_003481815.1|	-	0.25	11.1	2.2	0.32	10.7	2.0	1.4	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5381)
HTH_20	PF12840.7	gi|289583406|ref|YP_003481816.1|	-	3.1e-08	33.6	0.4	5.9e-08	32.6	0.2	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
FUR	PF01475.19	gi|289583406|ref|YP_003481816.1|	-	0.0003	20.9	0.0	0.00034	20.7	0.0	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_11	PF08279.12	gi|289583406|ref|YP_003481816.1|	-	0.00085	19.2	0.1	0.0017	18.3	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|289583406|ref|YP_003481816.1|	-	0.00086	19.1	0.0	0.0014	18.5	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|289583406|ref|YP_003481816.1|	-	0.0018	18.1	0.0	0.003	17.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289583406|ref|YP_003481816.1|	-	0.0038	17.1	0.1	0.0063	16.4	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|289583406|ref|YP_003481816.1|	-	0.0091	15.5	0.0	0.016	14.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.14	gi|289583406|ref|YP_003481816.1|	-	0.014	15.4	0.0	0.023	14.7	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
ArsR	PF09824.9	gi|289583406|ref|YP_003481816.1|	-	0.018	14.6	0.0	0.023	14.3	0.0	1.2	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
CdiI_N	PF18228.1	gi|289583406|ref|YP_003481816.1|	-	0.02	14.7	0.0	0.057	13.3	0.0	1.7	2	0	0	2	2	2	0	CdiI	N-terminal	domain
HTH_27	PF13463.6	gi|289583406|ref|YP_003481816.1|	-	0.025	15.1	0.1	0.042	14.3	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
US6	PF17616.2	gi|289583406|ref|YP_003481816.1|	-	0.08	12.9	0.0	0.1	12.6	0.0	1.1	1	0	0	1	1	1	0	Viral	unique	short	region	6
Phage_rep_org_N	PF09681.10	gi|289583406|ref|YP_003481816.1|	-	0.098	12.6	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF2975	PF11188.8	gi|289583407|ref|YP_003481817.1|	-	0.026	14.4	2.9	0.03	14.2	2.9	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
Thioredoxin	PF00085.20	gi|289583408|ref|YP_003481818.1|	-	1.9e-12	47.1	0.0	2.4e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
TraF	PF13728.6	gi|289583408|ref|YP_003481818.1|	-	2.1e-06	27.7	0.0	3e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Thioredoxin_3	PF13192.6	gi|289583408|ref|YP_003481818.1|	-	0.00067	19.7	0.0	0.0013	18.7	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|289583408|ref|YP_003481818.1|	-	0.00085	19.7	0.0	0.013	15.9	0.0	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
HyaE	PF07449.11	gi|289583408|ref|YP_003481818.1|	-	0.0068	16.4	0.0	0.011	15.7	0.0	1.3	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
TrbC_Ftype	PF09673.10	gi|289583408|ref|YP_003481818.1|	-	0.047	13.7	0.0	0.062	13.3	0.0	1.2	1	0	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
OST3_OST6	PF04756.13	gi|289583408|ref|YP_003481818.1|	-	0.23	10.8	0.0	0.3	10.4	0.0	1.2	1	0	0	1	1	1	0	OST3	/	OST6	family,	transporter	family
FAM176	PF14851.6	gi|289583409|ref|YP_003481819.1|	-	0.0012	18.5	1.2	0.0021	17.7	1.2	1.3	1	0	0	1	1	1	1	FAM176	family
DUF4094	PF13334.6	gi|289583409|ref|YP_003481819.1|	-	0.012	16.0	0.0	0.027	14.9	0.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4094)
SelP_N	PF04592.14	gi|289583409|ref|YP_003481819.1|	-	0.032	13.6	13.5	0.051	13.0	13.5	1.2	1	0	0	1	1	1	0	Selenoprotein	P,	N	terminal	region
Connexin	PF00029.19	gi|289583409|ref|YP_003481819.1|	-	0.14	11.9	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	Connexin
DUF2457	PF10446.9	gi|289583409|ref|YP_003481819.1|	-	0.17	11.0	9.3	0.21	10.7	9.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2457)
NicO	PF03824.16	gi|289583409|ref|YP_003481819.1|	-	0.52	9.6	4.0	1	8.6	4.0	1.6	1	1	0	1	1	1	0	High-affinity	nickel-transport	protein
DNA_pol_phi	PF04931.13	gi|289583409|ref|YP_003481819.1|	-	4.9	5.1	6.6	6.2	4.8	6.6	1.1	1	0	0	1	1	1	0	DNA	polymerase	phi
Thioredoxin_4	PF13462.6	gi|289583411|ref|YP_003481821.1|	-	7.5e-26	91.3	0.0	8.8e-26	91.0	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|289583411|ref|YP_003481821.1|	-	3.7e-12	46.7	0.6	1.6e-11	44.6	0.6	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
DSBA	PF01323.20	gi|289583411|ref|YP_003481821.1|	-	1.3e-11	44.6	0.6	6.2e-09	35.9	0.6	2.1	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.6	gi|289583411|ref|YP_003481821.1|	-	0.0017	18.1	0.1	0.0068	16.1	0.0	1.8	2	0	0	2	2	2	1	Thioredoxin
TraF	PF13728.6	gi|289583411|ref|YP_003481821.1|	-	0.02	14.7	0.1	0.1	12.4	0.0	1.9	2	0	0	2	2	2	0	F	plasmid	transfer	operon	protein
Thioredoxin	PF00085.20	gi|289583411|ref|YP_003481821.1|	-	0.051	13.6	0.0	0.16	11.9	0.0	1.8	2	0	0	2	2	2	0	Thioredoxin
Thioredoxin_8	PF13905.6	gi|289583411|ref|YP_003481821.1|	-	0.19	12.1	0.0	9.7	6.6	0.0	2.2	2	0	0	2	2	2	0	Thioredoxin-like
Usp	PF00582.26	gi|289583412|ref|YP_003481822.1|	-	1.5e-38	132.5	0.3	2.4e-24	86.5	0.0	2.3	2	0	0	2	2	2	2	Universal	stress	protein	family
TauE	PF01925.19	gi|289583415|ref|YP_003481825.1|	-	2.6e-38	132.0	25.1	2.6e-38	132.0	25.1	1.7	1	1	1	2	2	2	1	Sulfite	exporter	TauE/SafE
Na_H_Exchanger	PF00999.21	gi|289583416|ref|YP_003481826.1|	-	5.4e-35	120.9	47.3	7.7e-35	120.4	47.3	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|289583416|ref|YP_003481826.1|	-	2.7e-31	108.2	0.6	5.8e-31	107.2	0.6	1.5	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|289583416|ref|YP_003481826.1|	-	2.9e-11	43.0	0.1	9.3e-11	41.4	0.1	2.0	1	0	0	1	1	1	1	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|289583416|ref|YP_003481826.1|	-	1.5e-06	28.6	0.1	4.1e-06	27.2	0.1	1.7	1	0	0	1	1	1	1	Putative	NAD(P)-binding
ApbA	PF02558.16	gi|289583416|ref|YP_003481826.1|	-	0.0011	18.6	0.4	0.0037	16.9	0.0	2.1	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Castor_Poll_mid	PF06241.12	gi|289583416|ref|YP_003481826.1|	-	0.0023	17.9	0.0	0.0058	16.6	0.0	1.6	1	0	0	1	1	1	1	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
UDPG_MGDP_dh_N	PF03721.14	gi|289583416|ref|YP_003481826.1|	-	0.0032	17.1	0.0	0.0057	16.3	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_3	PF01494.19	gi|289583416|ref|YP_003481826.1|	-	0.0037	16.6	0.0	0.0057	16.0	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|289583416|ref|YP_003481826.1|	-	0.014	15.6	0.0	0.047	13.9	0.0	1.9	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.18	gi|289583416|ref|YP_003481826.1|	-	0.016	15.1	0.1	0.032	14.1	0.1	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Epimerase	PF01370.21	gi|289583416|ref|YP_003481826.1|	-	0.017	14.6	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
NAD_binding_2	PF03446.15	gi|289583416|ref|YP_003481826.1|	-	0.017	15.3	0.0	0.046	13.9	0.0	1.7	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Methyltransf_31	PF13847.6	gi|289583416|ref|YP_003481826.1|	-	0.031	14.0	0.0	0.055	13.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
F420_oxidored	PF03807.17	gi|289583416|ref|YP_003481826.1|	-	0.032	14.8	0.1	0.098	13.3	0.1	1.8	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Lycopene_cycl	PF05834.12	gi|289583416|ref|YP_003481826.1|	-	0.036	13.1	0.1	0.056	12.5	0.1	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
DAO	PF01266.24	gi|289583416|ref|YP_003481826.1|	-	0.041	13.5	0.1	0.063	12.9	0.1	1.4	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
XdhC_C	PF13478.6	gi|289583416|ref|YP_003481826.1|	-	0.059	13.9	0.1	0.12	12.9	0.1	1.5	1	0	0	1	1	1	0	XdhC	Rossmann	domain
HI0933_like	PF03486.14	gi|289583416|ref|YP_003481826.1|	-	0.095	11.4	0.0	0.17	10.5	0.0	1.4	1	0	0	1	1	1	0	HI0933-like	protein
Methyltransf_25	PF13649.6	gi|289583416|ref|YP_003481826.1|	-	0.11	13.2	0.0	0.3	11.8	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
AAA_31	PF13614.6	gi|289583416|ref|YP_003481826.1|	-	0.14	12.1	0.0	0.23	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Aminotran_5	PF00266.19	gi|289583417|ref|YP_003481827.1|	-	2.3e-53	181.5	0.0	1.3e-52	179.0	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|289583417|ref|YP_003481827.1|	-	0.00011	21.6	0.0	0.00041	19.6	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|289583417|ref|YP_003481827.1|	-	0.0017	17.0	0.0	0.0024	16.4	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|289583417|ref|YP_003481827.1|	-	0.0055	16.1	0.1	0.029	13.7	0.3	1.8	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
ABATE	PF07336.11	gi|289583417|ref|YP_003481827.1|	-	3.9	8.1	8.7	0.27	11.9	0.8	2.8	2	2	0	2	2	2	0	Putative	stress-induced	transcription	regulator
Transgly_assoc	PF04226.13	gi|289583418|ref|YP_003481828.1|	-	0.0083	16.4	4.0	0.017	15.4	3.9	1.6	1	1	0	1	1	1	1	Transglycosylase	associated	protein
TAT_signal	PF10518.9	gi|289583419|ref|YP_003481829.1|	-	0.24	11.3	0.8	0.35	10.8	0.8	1.2	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Pyr_redox_2	PF07992.14	gi|289583420|ref|YP_003481830.1|	-	8.3e-61	205.8	2.4	1.1e-60	205.4	2.4	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289583420|ref|YP_003481830.1|	-	9.9e-20	70.9	8.0	8.1e-18	64.8	0.4	3.8	4	0	0	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|289583420|ref|YP_003481830.1|	-	1.1e-13	51.4	0.1	9.6e-13	48.4	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
NAD_binding_8	PF13450.6	gi|289583420|ref|YP_003481830.1|	-	1.1e-09	38.3	0.1	0.00057	20.1	0.0	2.8	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.6	gi|289583420|ref|YP_003481830.1|	-	6.7e-07	28.9	1.1	0.2	10.8	0.4	3.9	2	2	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289583420|ref|YP_003481830.1|	-	1.6e-06	27.1	0.2	0.029	13.1	0.0	3.9	3	1	1	4	4	4	2	HI0933-like	protein
TrkA_N	PF02254.18	gi|289583420|ref|YP_003481830.1|	-	1.8e-05	25.0	0.0	0.001	19.3	0.1	2.7	2	0	0	2	2	2	1	TrkA-N	domain
DAO	PF01266.24	gi|289583420|ref|YP_003481830.1|	-	3.2e-05	23.7	7.8	0.046	13.3	0.3	4.1	3	1	0	4	4	4	2	FAD	dependent	oxidoreductase
UDPG_MGDP_dh_N	PF03721.14	gi|289583420|ref|YP_003481830.1|	-	0.0015	18.1	0.3	0.0043	16.6	0.2	1.9	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|289583420|ref|YP_003481830.1|	-	0.0075	16.2	0.2	0.012	15.5	0.2	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|289583420|ref|YP_003481830.1|	-	0.0084	16.5	0.3	0.16	12.4	0.1	2.6	2	1	0	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_3	PF01494.19	gi|289583420|ref|YP_003481830.1|	-	0.01	15.1	0.1	0.01	15.1	0.1	2.4	3	0	0	3	3	3	0	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|289583420|ref|YP_003481830.1|	-	0.011	14.8	4.9	0.22	10.6	0.1	3.5	2	2	1	4	4	4	0	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|289583420|ref|YP_003481830.1|	-	0.015	14.6	11.9	0.018	14.4	0.1	3.8	3	1	1	4	4	4	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Amino_oxidase	PF01593.24	gi|289583420|ref|YP_003481830.1|	-	0.024	14.0	0.2	3.9	6.7	0.0	3.1	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
FAD_oxidored	PF12831.7	gi|289583420|ref|YP_003481830.1|	-	0.045	13.1	1.1	0.24	10.7	0.0	2.3	2	1	1	3	3	3	0	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|289583420|ref|YP_003481830.1|	-	0.051	12.6	1.4	3.7	6.5	0.0	2.8	2	1	0	3	3	3	0	Lycopene	cyclase	protein
NAD_binding_2	PF03446.15	gi|289583420|ref|YP_003481830.1|	-	0.066	13.4	0.1	0.15	12.2	0.1	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GIDA	PF01134.22	gi|289583420|ref|YP_003481830.1|	-	0.081	12.0	1.4	3.5	6.6	0.3	2.2	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
DrsE_2	PF13686.6	gi|289583421|ref|YP_003481831.1|	-	2.3e-51	173.7	0.3	2.8e-51	173.4	0.3	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.15	gi|289583421|ref|YP_003481831.1|	-	8.3e-06	26.2	0.0	2e-05	24.9	0.0	1.6	1	1	0	1	1	1	1	DsrE/DsrF-like	family
FlaC_arch	PF05377.11	gi|289583421|ref|YP_003481831.1|	-	0.14	12.5	0.6	0.34	11.3	0.6	1.7	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
TusA	PF01206.17	gi|289583422|ref|YP_003481832.1|	-	4.6e-20	71.2	0.0	5.3e-20	71.0	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.9	gi|289583422|ref|YP_003481832.1|	-	0.012	15.4	0.0	0.021	14.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2249)
Thioredoxin	PF00085.20	gi|289583423|ref|YP_003481833.1|	-	1.1e-25	89.6	0.0	1.4e-25	89.3	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|289583423|ref|YP_003481833.1|	-	3.8e-09	37.0	0.2	9.4e-08	32.5	0.2	2.2	1	1	0	1	1	1	1	Thioredoxin-like	domain
DSBA	PF01323.20	gi|289583423|ref|YP_003481833.1|	-	1.4e-06	28.2	0.0	2.1e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_9	PF14595.6	gi|289583423|ref|YP_003481833.1|	-	8.1e-05	22.4	0.4	0.00021	21.1	0.0	1.7	2	0	0	2	2	2	1	Thioredoxin
TraF	PF13728.6	gi|289583423|ref|YP_003481833.1|	-	0.00062	19.7	0.0	0.00086	19.2	0.0	1.3	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Thioredoxin_7	PF13899.6	gi|289583423|ref|YP_003481833.1|	-	0.00075	19.6	0.9	0.0013	18.9	0.1	1.8	2	1	0	2	2	2	1	Thioredoxin-like
Thioredoxin_8	PF13905.6	gi|289583423|ref|YP_003481833.1|	-	0.00083	19.6	0.0	0.21	11.9	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
AhpC-TSA	PF00578.21	gi|289583423|ref|YP_003481833.1|	-	0.0012	18.7	0.0	0.0017	18.2	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Glutaredoxin	PF00462.24	gi|289583423|ref|YP_003481833.1|	-	0.0037	17.5	0.1	0.0073	16.5	0.1	1.6	1	0	0	1	1	1	1	Glutaredoxin
OST3_OST6	PF04756.13	gi|289583423|ref|YP_003481833.1|	-	0.02	14.2	0.0	0.025	13.9	0.0	1.1	1	0	0	1	1	1	0	OST3	/	OST6	family,	transporter	family
HyaE	PF07449.11	gi|289583423|ref|YP_003481833.1|	-	0.045	13.7	0.0	0.072	13.1	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_5	PF13743.6	gi|289583423|ref|YP_003481833.1|	-	0.17	11.6	0.0	0.34	10.6	0.0	1.5	1	1	1	2	2	2	0	Thioredoxin
Usp	PF00582.26	gi|289583424|ref|YP_003481834.1|	-	1.3e-26	93.8	11.5	3.6e-17	63.2	0.7	2.5	2	1	0	2	2	2	2	Universal	stress	protein	family
Palm_thioest	PF02089.15	gi|289583424|ref|YP_003481834.1|	-	0.26	11.1	0.0	0.4	10.5	0.0	1.2	1	0	0	1	1	1	0	Palmitoyl	protein	thioesterase
Bax1-I	PF01027.20	gi|289583425|ref|YP_003481835.1|	-	0.11	12.3	5.8	0.14	12.0	5.8	1.1	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
ABC2_membrane_3	PF12698.7	gi|289583425|ref|YP_003481835.1|	-	1.4	7.9	5.2	2.1	7.3	5.2	1.3	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Usp	PF00582.26	gi|289583426|ref|YP_003481836.1|	-	5.6e-34	117.7	0.0	6.2e-34	117.5	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
EspB	PF05802.11	gi|289583426|ref|YP_003481836.1|	-	0.067	13.2	0.2	0.086	12.8	0.2	1.2	1	0	0	1	1	1	0	Enterobacterial	EspB	protein
AP_endonuc_2	PF01261.24	gi|289583426|ref|YP_003481836.1|	-	0.068	12.6	0.1	0.13	11.7	0.0	1.4	1	1	1	2	2	2	0	Xylose	isomerase-like	TIM	barrel
Usp	PF00582.26	gi|289583427|ref|YP_003481837.1|	-	1.8e-31	109.5	1.7	2.1e-31	109.3	1.7	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
MF_alpha_N	PF05436.11	gi|289583427|ref|YP_003481837.1|	-	0.069	13.1	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Mating	factor	alpha	precursor	N-terminus
Usp	PF00582.26	gi|289583428|ref|YP_003481838.1|	-	2.2e-36	125.4	1.5	2.5e-36	125.3	1.5	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Methyltransf_31	PF13847.6	gi|289583429|ref|YP_003481839.1|	-	1.8e-21	76.5	0.0	2.2e-21	76.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289583429|ref|YP_003481839.1|	-	2.2e-20	73.2	0.0	3.5e-20	72.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|289583429|ref|YP_003481839.1|	-	1.8e-18	67.0	0.0	3.3e-18	66.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289583429|ref|YP_003481839.1|	-	3.6e-17	62.9	0.0	6.1e-17	62.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|289583429|ref|YP_003481839.1|	-	1.5e-15	57.4	0.0	2.1e-15	56.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289583429|ref|YP_003481839.1|	-	2.5e-15	56.5	0.0	3.4e-15	56.0	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.19	gi|289583429|ref|YP_003481839.1|	-	8.2e-13	48.6	0.0	1.1e-12	48.1	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
NodS	PF05401.11	gi|289583429|ref|YP_003481839.1|	-	1.4e-08	34.6	0.0	2e-08	34.1	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
CMAS	PF02353.20	gi|289583429|ref|YP_003481839.1|	-	3.6e-08	33.0	0.0	4.8e-08	32.6	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltr_RsmB-F	PF01189.17	gi|289583429|ref|YP_003481839.1|	-	2.4e-06	27.3	0.0	3.7e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
MTS	PF05175.14	gi|289583429|ref|YP_003481839.1|	-	4.2e-06	26.4	0.0	1.1e-05	25.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|289583429|ref|YP_003481839.1|	-	1.1e-05	25.0	0.0	2.1e-05	24.1	0.0	1.4	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
TehB	PF03848.14	gi|289583429|ref|YP_003481839.1|	-	3.3e-05	23.4	0.0	4.3e-05	23.0	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
UPF0020	PF01170.18	gi|289583429|ref|YP_003481839.1|	-	0.00055	19.7	0.0	0.00082	19.1	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_4	PF02390.17	gi|289583429|ref|YP_003481839.1|	-	0.00059	19.4	0.0	0.00099	18.6	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
RrnaAD	PF00398.20	gi|289583429|ref|YP_003481839.1|	-	0.0026	16.9	0.0	0.0035	16.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
FtsJ	PF01728.19	gi|289583429|ref|YP_003481839.1|	-	0.0027	17.8	0.0	0.0042	17.2	0.0	1.5	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
NNMT_PNMT_TEMT	PF01234.17	gi|289583429|ref|YP_003481839.1|	-	0.0034	16.6	0.1	1.1	8.4	0.0	2.1	1	1	1	2	2	2	2	NNMT/PNMT/TEMT	family
GCD14	PF08704.10	gi|289583429|ref|YP_003481839.1|	-	0.0039	16.9	0.0	0.0056	16.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_18	PF12847.7	gi|289583429|ref|YP_003481839.1|	-	0.0058	16.6	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.15	gi|289583429|ref|YP_003481839.1|	-	0.0083	16.0	0.0	0.027	14.3	0.0	1.8	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_32	PF13679.6	gi|289583429|ref|YP_003481839.1|	-	0.017	15.2	0.0	0.027	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.12	gi|289583429|ref|YP_003481839.1|	-	0.025	14.1	0.0	0.04	13.5	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
ADH_zinc_N_2	PF13602.6	gi|289583429|ref|YP_003481839.1|	-	0.056	14.5	0.1	0.24	12.5	0.0	1.9	1	1	1	2	2	2	0	Zinc-binding	dehydrogenase
Methyltransf_3	PF01596.17	gi|289583429|ref|YP_003481839.1|	-	0.12	11.5	0.0	0.17	11.0	0.0	1.1	1	0	0	1	1	1	0	O-methyltransferase
Methyltransf_5	PF01795.19	gi|289583429|ref|YP_003481839.1|	-	0.19	11.2	0.0	3.3	7.1	0.0	2.0	1	1	1	2	2	2	0	MraW	methylase	family
HTH_10	PF04967.12	gi|289583430|ref|YP_003481840.1|	-	7.6e-12	44.9	0.0	1.4e-11	44.0	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_17	PF12728.7	gi|289583430|ref|YP_003481840.1|	-	0.098	12.9	0.0	0.21	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Pyridox_ox_2	PF12900.7	gi|289583431|ref|YP_003481841.1|	-	3.6e-20	72.4	0.0	4.1e-20	72.2	0.0	1.0	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
SAP	PF02037.27	gi|289583431|ref|YP_003481841.1|	-	0.067	13.0	0.0	0.16	11.8	0.0	1.6	2	0	0	2	2	2	0	SAP	domain
DS	PF01916.17	gi|289583432|ref|YP_003481842.1|	-	2e-99	332.5	0.0	2.2e-99	332.3	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
PAS_4	PF08448.10	gi|289583434|ref|YP_003481844.1|	-	5.9e-32	110.2	3.2	1.5e-15	57.4	0.0	3.0	3	0	0	3	3	3	2	PAS	fold
Response_reg	PF00072.24	gi|289583434|ref|YP_003481844.1|	-	3.9e-14	52.8	0.0	1.4e-13	51.0	0.0	2.0	2	0	0	2	2	2	1	Response	regulator	receiver	domain
PAS	PF00989.25	gi|289583434|ref|YP_003481844.1|	-	5.7e-14	52.1	0.1	8.7e-07	28.9	0.0	3.1	2	1	1	3	3	3	2	PAS	fold
PAS_8	PF13188.7	gi|289583434|ref|YP_003481844.1|	-	6.1e-12	45.3	0.0	3.9e-06	26.7	0.0	3.0	2	0	0	2	2	2	2	PAS	domain
HATPase_c	PF02518.26	gi|289583434|ref|YP_003481844.1|	-	2.9e-11	43.9	0.0	5.4e-11	43.0	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.7	gi|289583434|ref|YP_003481844.1|	-	1.9e-09	37.7	0.0	2.8e-05	24.3	0.0	2.7	2	0	0	2	2	2	2	PAS	domain
PAS_7	PF12860.7	gi|289583434|ref|YP_003481844.1|	-	3.2e-08	33.7	0.0	0.0076	16.4	0.0	3.9	3	1	0	3	3	3	2	PAS	fold
PAS_10	PF13596.6	gi|289583434|ref|YP_003481844.1|	-	1e-06	29.3	0.0	0.00065	20.3	0.0	2.6	2	0	0	2	2	2	2	PAS	domain
HisKA_4TM	PF16926.5	gi|289583434|ref|YP_003481844.1|	-	0.00027	20.5	0.2	0.00061	19.4	0.0	1.6	2	0	0	2	2	2	1	Archaeal	4TM	region	of	histidine	kinase
HATPase_c_2	PF13581.6	gi|289583434|ref|YP_003481844.1|	-	0.00038	20.4	0.0	0.0009	19.2	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
SPOB_a	PF14689.6	gi|289583434|ref|YP_003481844.1|	-	0.0023	17.6	0.4	0.0057	16.3	0.4	1.7	1	0	0	1	1	1	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
OKR_DC_1_N	PF03709.15	gi|289583434|ref|YP_003481844.1|	-	0.0044	17.3	0.0	0.02	15.2	0.0	2.1	2	0	0	2	2	2	1	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
HATPase_c_5	PF14501.6	gi|289583434|ref|YP_003481844.1|	-	0.01	15.7	0.0	0.03	14.2	0.0	1.7	2	0	0	2	2	2	0	GHKL	domain
HalX	PF08663.10	gi|289583435|ref|YP_003481845.1|	-	4.2e-22	78.3	4.7	7.7e-22	77.4	4.7	1.5	1	0	0	1	1	1	1	HalX	domain
Response_reg	PF00072.24	gi|289583435|ref|YP_003481845.1|	-	3.6e-20	72.2	0.1	5.8e-20	71.5	0.1	1.3	1	0	0	1	1	1	1	Response	regulator	receiver	domain
DUF5305	PF17231.2	gi|289583436|ref|YP_003481846.1|	-	2.2e-51	174.4	0.4	2.2e-51	174.4	0.4	2.6	3	1	1	4	4	4	1	Family	of	unknown	function	(DUF5305)
Ni_hydr_CYTB	PF01292.20	gi|289583436|ref|YP_003481846.1|	-	0.021	14.4	0.1	0.7	9.5	0.0	2.2	2	0	0	2	2	2	0	Prokaryotic	cytochrome	b561
DUF3995	PF13160.6	gi|289583436|ref|YP_003481846.1|	-	0.069	13.5	1.3	2.3	8.6	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3995)
PepSY_TM	PF03929.16	gi|289583436|ref|YP_003481846.1|	-	2.1	8.0	5.3	17	4.9	2.6	2.5	2	1	0	2	2	2	0	PepSY-associated	TM	region
Peptidase_S24	PF00717.23	gi|289583437|ref|YP_003481847.1|	-	8.7e-07	28.8	0.0	2.9e-06	27.1	0.0	1.8	2	0	0	2	2	2	1	Peptidase	S24-like
CARDB	PF07705.11	gi|289583438|ref|YP_003481848.1|	-	4.2e-13	49.4	5.1	6e-09	36.1	0.2	3.0	3	0	0	3	3	3	2	CARDB
BsuPI	PF12690.7	gi|289583438|ref|YP_003481848.1|	-	0.00017	21.6	0.1	7.9	6.6	0.0	4.0	5	0	0	5	5	5	2	Intracellular	proteinase	inhibitor
ASH	PF15780.5	gi|289583438|ref|YP_003481848.1|	-	0.00056	20.1	1.9	0.75	10.0	0.1	3.8	2	1	1	3	3	3	1	Abnormal	spindle-like	microcephaly-assoc'd,	ASPM-SPD-2-Hydin
DUF1573	PF07610.11	gi|289583438|ref|YP_003481848.1|	-	0.00079	19.4	0.1	1.1	9.4	0.1	3.0	2	2	0	2	2	2	2	Protein	of	unknown	function	(DUF1573)
Fn3-like	PF14310.6	gi|289583438|ref|YP_003481848.1|	-	0.0014	18.7	0.1	1.4	9.0	0.0	3.6	3	0	0	3	3	3	1	Fibronectin	type	III-like	domain
Ig_GlcNase	PF18368.1	gi|289583438|ref|YP_003481848.1|	-	0.0061	16.7	0.3	3.3	7.9	0.0	3.9	3	3	2	5	5	5	1	Exo-beta-D-glucosaminidase	Ig-fold	domain
bMG6	PF17962.1	gi|289583438|ref|YP_003481848.1|	-	0.036	14.2	0.0	0.32	11.1	0.0	2.5	3	0	0	3	3	3	0	Bacterial	macroglobulin	domain	6
MecA_N	PF05223.11	gi|289583438|ref|YP_003481848.1|	-	0.068	13.4	0.1	10	6.4	0.3	2.3	2	0	0	2	2	2	0	NTF2-like	N-terminal	transpeptidase	domain
DUF11	PF01345.18	gi|289583438|ref|YP_003481848.1|	-	1.2	9.5	16.0	2.6	8.4	4.9	4.6	2	2	0	2	2	2	0	Domain	of	unknown	function	DUF11
Sipho_tail	PF05709.11	gi|289583439|ref|YP_003481849.1|	-	0.018	14.5	0.7	0.023	14.1	0.7	1.1	1	0	0	1	1	1	0	Phage	tail	protein
BET	PF17035.5	gi|289583439|ref|YP_003481849.1|	-	0.47	10.7	4.4	0.39	10.9	0.8	2.3	2	0	0	2	2	2	0	Bromodomain	extra-terminal	-	transcription	regulation
DUF1735	PF08522.10	gi|289583439|ref|YP_003481849.1|	-	1.1	9.9	5.4	12	6.5	0.2	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1735)
PAS_12	PF18095.1	gi|289583440|ref|YP_003481850.1|	-	0.11	12.1	0.0	0.19	11.4	0.0	1.3	1	0	0	1	1	1	0	UPF0242	C-terminal	PAS-like	domain
DUF5326	PF17260.2	gi|289583440|ref|YP_003481850.1|	-	0.57	10.4	3.1	0.96	9.6	3.1	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5326)
GCOM2	PF15328.6	gi|289583440|ref|YP_003481850.1|	-	1.2	9.5	5.8	1.6	9.1	5.8	1.2	1	0	0	1	1	1	0	Putative	GRINL1B	complex	locus	protein	2
Dsh_C	PF12316.8	gi|289583440|ref|YP_003481850.1|	-	7.8	6.9	15.7	11	6.4	15.7	1.1	1	0	0	1	1	1	0	Segment	polarity	protein	dishevelled	(Dsh)	C	terminal
Bactofilin	PF04519.13	gi|289583441|ref|YP_003481851.1|	-	1.2e-06	28.7	0.9	1.2e-06	28.7	0.9	2.4	3	0	0	3	3	3	1	Polymer-forming	cytoskeletal
FapA	PF03961.13	gi|289583441|ref|YP_003481851.1|	-	3e-06	26.1	4.2	4.7e-06	25.5	4.2	1.2	1	0	0	1	1	1	1	Flagellar	Assembly	Protein	A
Fil_haemagg	PF05594.14	gi|289583441|ref|YP_003481851.1|	-	0.025	15.1	10.5	0.048	14.2	0.1	3.8	3	1	0	4	4	4	0	Haemagluttinin	repeat
MinC_C	PF03775.16	gi|289583441|ref|YP_003481851.1|	-	0.71	9.9	10.5	0.18	11.8	1.5	3.3	3	1	1	4	4	4	0	Septum	formation	inhibitor	MinC,	C-terminal	domain
DUF835	PF05763.12	gi|289583442|ref|YP_003481852.1|	-	1.1e-05	25.2	0.0	1.4e-05	24.8	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
ATPase	PF06745.13	gi|289583442|ref|YP_003481852.1|	-	0.00033	20.1	0.0	0.0013	18.2	0.0	1.8	1	1	0	1	1	1	1	KaiC
PAXNEB	PF05625.11	gi|289583442|ref|YP_003481852.1|	-	0.0053	15.9	0.0	0.006	15.8	0.0	1.1	1	0	0	1	1	1	1	PAXNEB	protein
Aminotran_3	PF00202.21	gi|289583443|ref|YP_003481853.1|	-	1.8e-57	194.8	0.0	2.3e-57	194.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aldedh	PF00171.22	gi|289583444|ref|YP_003481854.1|	-	2.5e-137	458.2	0.0	2.9e-137	458.0	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|289583444|ref|YP_003481854.1|	-	0.00069	18.8	0.0	0.00095	18.3	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Aminotran_3	PF00202.21	gi|289583445|ref|YP_003481855.1|	-	1.2e-97	327.2	0.0	1.4e-97	326.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|289583445|ref|YP_003481855.1|	-	0.03	13.5	0.0	0.07	12.3	0.0	1.6	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
AsnC_trans_reg	PF01037.21	gi|289583446|ref|YP_003481856.1|	-	3.1e-11	43.1	0.9	5e-11	42.4	0.9	1.3	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|289583446|ref|YP_003481856.1|	-	7.9e-10	38.1	0.8	1.3e-09	37.4	0.8	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|289583446|ref|YP_003481856.1|	-	2e-07	30.7	0.1	3.4e-07	30.0	0.1	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.20	gi|289583446|ref|YP_003481856.1|	-	0.00074	19.3	0.1	0.0012	18.7	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.7	gi|289583446|ref|YP_003481856.1|	-	0.00095	19.0	0.0	0.0015	18.3	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|289583446|ref|YP_003481856.1|	-	0.0013	18.6	0.5	0.004	17.1	0.5	1.8	1	0	0	1	1	1	1	HTH	domain
HTH_10	PF04967.12	gi|289583446|ref|YP_003481856.1|	-	0.0047	16.7	0.0	0.01	15.6	0.0	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_IclR	PF09339.10	gi|289583446|ref|YP_003481856.1|	-	0.0057	16.4	0.0	0.0095	15.7	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.19	gi|289583446|ref|YP_003481856.1|	-	0.0076	16.1	0.1	0.029	14.3	0.0	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|289583446|ref|YP_003481856.1|	-	0.0083	16.0	0.1	0.017	15.1	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|289583446|ref|YP_003481856.1|	-	0.0091	16.0	0.0	0.018	15.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.6	gi|289583446|ref|YP_003481856.1|	-	0.0095	16.4	0.1	0.022	15.2	0.1	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
C1q	PF00386.21	gi|289583446|ref|YP_003481856.1|	-	0.01	16.1	0.0	0.014	15.6	0.0	1.2	1	0	0	1	1	1	0	C1q	domain
HTH_WhiA	PF02650.14	gi|289583446|ref|YP_003481856.1|	-	0.039	14.3	0.1	0.088	13.2	0.1	1.6	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
B-block_TFIIIC	PF04182.12	gi|289583446|ref|YP_003481856.1|	-	0.098	12.8	0.0	0.2	11.8	0.0	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rrf2	PF02082.20	gi|289583446|ref|YP_003481856.1|	-	0.11	12.8	0.2	4.6	7.7	0.1	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
Ribosomal_S13	PF00416.22	gi|289583446|ref|YP_003481856.1|	-	0.38	11.1	3.9	3.6	8.0	0.4	2.7	3	0	0	3	3	3	0	Ribosomal	protein	S13/S18
Peptidase_M20	PF01546.28	gi|289583447|ref|YP_003481857.1|	-	1.1e-29	103.6	2.2	1.5e-29	103.2	2.2	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583447|ref|YP_003481857.1|	-	1.6e-22	79.5	0.0	2.7e-22	78.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|289583447|ref|YP_003481857.1|	-	0.026	14.2	0.6	0.17	11.6	0.1	2.1	2	0	0	2	2	2	0	Peptidase	family	M28
BTP	PF05232.12	gi|289583448|ref|YP_003481858.1|	-	1.6	8.8	8.0	3.3	7.8	8.0	1.5	1	1	0	1	1	1	0	Chlorhexidine	efflux	transporter
COX1	PF00115.20	gi|289583449|ref|YP_003481859.1|	-	2e-90	303.7	69.6	1.4e-89	300.9	65.1	2.2	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX2	PF00116.20	gi|289583450|ref|YP_003481860.1|	-	2.6e-10	40.2	0.1	6.5e-10	38.9	0.1	1.7	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.6	gi|289583450|ref|YP_003481860.1|	-	3.9e-05	23.7	0.1	0.00014	21.9	0.0	1.9	2	0	0	2	2	2	1	Cupredoxin-like	domain
A2M	PF00207.22	gi|289583450|ref|YP_003481860.1|	-	0.029	14.2	1.6	1.2	9.0	0.0	2.7	3	0	0	3	3	3	0	Alpha-2-macroglobulin	family
Big_3_5	PF16640.5	gi|289583450|ref|YP_003481860.1|	-	0.04	14.1	1.4	0.04	14.1	1.4	2.1	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
COX2-transmemb	PF09125.10	gi|289583450|ref|YP_003481860.1|	-	0.054	13.3	0.6	0.095	12.5	0.6	1.3	1	0	0	1	1	1	0	Cytochrome	C	oxidase	subunit	II,	transmembrane
OAD_gamma	PF04277.13	gi|289583451|ref|YP_003481861.1|	-	5.3	7.7	5.3	3	8.5	1.9	1.9	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
E1-E2_ATPase	PF00122.20	gi|289583453|ref|YP_003481863.1|	-	3.9e-42	143.8	1.1	1e-41	142.5	1.1	1.7	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|289583453|ref|YP_003481863.1|	-	2e-31	109.9	3.6	4.2e-31	108.9	3.6	1.6	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|289583453|ref|YP_003481863.1|	-	1.3e-07	31.7	0.5	1.9e-07	31.1	0.5	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|289583453|ref|YP_003481863.1|	-	1.4e-07	31.8	0.0	6.4e-07	29.7	0.0	2.2	2	0	0	2	2	2	1	Heavy-metal-associated	domain
ATPase-cat_bd	PF12156.8	gi|289583453|ref|YP_003481863.1|	-	0.033	14.9	0.4	0.12	13.2	0.3	1.9	2	0	0	2	2	2	0	Putative	metal-binding	domain	of	cation	transport	ATPase
DUF2148	PF09918.9	gi|289583453|ref|YP_003481863.1|	-	2.6	8.1	6.5	4.7	7.3	4.5	2.6	2	1	0	2	2	2	0	Uncharacterized	protein	containing	a	ferredoxin	domain	(DUF2148)
Peptidase_M24	PF00557.24	gi|289583454|ref|YP_003481864.1|	-	3.6e-36	124.8	0.0	5e-36	124.3	0.0	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|289583454|ref|YP_003481864.1|	-	6.9e-23	81.8	0.1	1.2e-22	81.0	0.1	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
ELFV_dehydrog	PF00208.21	gi|289583455|ref|YP_003481865.1|	-	3.8e-71	239.6	0.0	4.8e-71	239.3	0.0	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|289583455|ref|YP_003481865.1|	-	3e-57	192.1	0.0	5.1e-57	191.3	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.19	gi|289583455|ref|YP_003481865.1|	-	0.00017	21.0	0.0	0.00031	20.2	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|289583455|ref|YP_003481865.1|	-	0.094	13.2	0.0	0.2	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
PemK_toxin	PF02452.17	gi|289583456|ref|YP_003481866.1|	-	0.00012	22.4	0.0	0.00014	22.2	0.0	1.1	1	0	0	1	1	1	1	PemK-like,	MazF-like	toxin	of	type	II	toxin-antitoxin	system
MarR_2	PF12802.7	gi|289583457|ref|YP_003481867.1|	-	9.8e-06	25.4	0.1	1.8e-05	24.5	0.1	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|289583457|ref|YP_003481867.1|	-	2.2e-05	24.2	0.1	7e-05	22.6	0.1	1.8	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.19	gi|289583457|ref|YP_003481867.1|	-	0.00031	20.9	0.0	0.00052	20.1	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TFIIE_alpha	PF02002.17	gi|289583457|ref|YP_003481867.1|	-	0.0005	19.9	0.0	0.00086	19.1	0.0	1.3	1	0	0	1	1	1	1	TFIIE	alpha	subunit
Rrf2	PF02082.20	gi|289583457|ref|YP_003481867.1|	-	0.00064	20.0	0.0	0.00096	19.5	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_IclR	PF09339.10	gi|289583457|ref|YP_003481867.1|	-	0.00076	19.2	0.0	0.0011	18.8	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|289583457|ref|YP_003481867.1|	-	0.0022	17.9	0.1	0.0033	17.3	0.1	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_11	PF08279.12	gi|289583457|ref|YP_003481867.1|	-	0.0029	17.5	0.2	0.0085	16.0	0.1	1.8	2	0	0	2	2	2	1	HTH	domain
GntR	PF00392.21	gi|289583457|ref|YP_003481867.1|	-	0.0096	15.6	0.1	0.018	14.7	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.7	gi|289583457|ref|YP_003481867.1|	-	0.086	12.9	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
FAD-oxidase_C	PF02913.19	gi|289583458|ref|YP_003481868.1|	-	3.4e-62	210.3	0.5	7.9e-62	209.1	0.2	1.8	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|289583458|ref|YP_003481868.1|	-	7e-41	139.2	1.8	1.5e-40	138.1	1.8	1.6	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_17	PF13534.6	gi|289583458|ref|YP_003481868.1|	-	2.9e-10	40.5	4.4	5.2e-10	39.7	4.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289583458|ref|YP_003481868.1|	-	3.9e-08	33.6	5.2	8.8e-08	32.5	5.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
CCG	PF02754.16	gi|289583458|ref|YP_003481868.1|	-	2.2e-07	31.0	0.0	4.6e-05	23.6	0.1	2.6	2	0	0	2	2	2	1	Cysteine-rich	domain
Fer4_9	PF13187.6	gi|289583458|ref|YP_003481868.1|	-	0.013	15.7	3.3	0.053	13.7	0.4	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Cytokin-bind	PF09265.10	gi|289583458|ref|YP_003481868.1|	-	0.017	14.5	0.1	0.028	13.8	0.1	1.2	1	0	0	1	1	1	0	Cytokinin	dehydrogenase	1,	FAD	and	cytokinin	binding
Fer4_10	PF13237.6	gi|289583458|ref|YP_003481868.1|	-	0.018	15.1	7.3	0.066	13.3	1.7	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289583458|ref|YP_003481868.1|	-	0.025	14.7	2.3	0.21	11.7	0.5	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289583458|ref|YP_003481868.1|	-	0.56	10.8	7.1	4.4	8.0	7.5	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289583458|ref|YP_003481868.1|	-	7.7	6.5	13.6	0.16	11.8	4.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
2-Hacid_dh_C	PF02826.19	gi|289583459|ref|YP_003481869.1|	-	5.4e-54	182.2	0.0	8e-54	181.7	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|289583459|ref|YP_003481869.1|	-	1.4e-14	53.9	0.0	1.7e-14	53.6	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
F420_oxidored	PF03807.17	gi|289583459|ref|YP_003481869.1|	-	0.0029	18.2	0.0	0.01	16.4	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.21	gi|289583459|ref|YP_003481869.1|	-	0.0093	15.4	0.0	0.016	14.6	0.0	1.3	1	0	0	1	1	1	1	ThiF	family
NAD_binding_7	PF13241.6	gi|289583459|ref|YP_003481869.1|	-	0.1	13.1	0.0	0.21	12.0	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.12	gi|289583459|ref|YP_003481869.1|	-	0.12	12.0	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Shikimate_DH	PF01488.20	gi|289583459|ref|YP_003481869.1|	-	0.14	12.3	0.0	0.66	10.0	0.0	2.1	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
Peptidase_M20	PF01546.28	gi|289583460|ref|YP_003481870.1|	-	1.7e-22	80.2	4.5	2.3e-22	79.7	4.5	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583460|ref|YP_003481870.1|	-	2.2e-11	43.7	1.5	5.1e-11	42.5	1.5	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
PALP	PF00291.25	gi|289583461|ref|YP_003481871.1|	-	1.6e-70	237.9	6.4	1.9e-70	237.6	6.4	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
MFS_1	PF07690.16	gi|289583463|ref|YP_003481873.1|	-	3.6e-45	154.4	50.4	5.7e-34	117.6	14.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289583463|ref|YP_003481873.1|	-	2.2e-07	30.1	21.3	0.00031	19.7	4.8	2.4	1	1	1	2	2	2	2	MFS_1	like	family
UPF0047	PF01894.17	gi|289583464|ref|YP_003481874.1|	-	9.6e-39	132.1	0.0	1.1e-38	131.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
DUF2267	PF10025.9	gi|289583465|ref|YP_003481875.1|	-	1.4e-31	109.3	0.1	3.3e-31	108.1	0.0	1.5	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2267)
Usp	PF00582.26	gi|289583466|ref|YP_003481876.1|	-	6.8e-37	127.1	0.3	7.7e-37	126.9	0.3	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DUF1485	PF07364.12	gi|289583467|ref|YP_003481877.1|	-	2.4e-94	315.8	4.0	3.1e-94	315.5	4.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M81
MlrC_C	PF07171.12	gi|289583467|ref|YP_003481877.1|	-	5e-60	202.7	0.1	1.1e-59	201.6	0.1	1.6	1	0	0	1	1	1	1	MlrC	C-terminus
SLC3A2_N	PF16028.5	gi|289583468|ref|YP_003481878.1|	-	0.051	13.1	3.3	0.06	12.9	3.3	1.1	1	0	0	1	1	1	0	Solute	carrier	family	3	member	2	N-terminus
Aminotran_3	PF00202.21	gi|289583469|ref|YP_003481879.1|	-	5.2e-76	255.9	0.0	1.2e-75	254.7	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class-III
BCCT	PF02028.17	gi|289583470|ref|YP_003481880.1|	-	5e-152	506.7	46.5	5.8e-152	506.5	46.5	1.0	1	0	0	1	1	1	1	BCCT,	betaine/carnitine/choline	family	transporter
MscL	PF01741.18	gi|289583470|ref|YP_003481880.1|	-	0.27	11.5	5.1	0.16	12.3	0.4	2.7	2	0	0	2	2	2	0	Large-conductance	mechanosensitive	channel,	MscL
Sdh5	PF03937.16	gi|289583471|ref|YP_003481881.1|	-	0.051	13.5	0.3	0.12	12.4	0.3	1.6	1	0	0	1	1	1	0	Flavinator	of	succinate	dehydrogenase
Phage_int_SAM_4	PF13495.6	gi|289583471|ref|YP_003481881.1|	-	0.058	13.9	0.2	1.3	9.6	0.0	2.7	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
YtxH	PF12732.7	gi|289583471|ref|YP_003481881.1|	-	0.099	13.2	0.4	0.33	11.5	0.4	1.9	1	0	0	1	1	1	0	YtxH-like	protein
Peptidase_M20	PF01546.28	gi|289583472|ref|YP_003481882.1|	-	3.7e-23	82.3	3.1	5e-23	81.9	3.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583472|ref|YP_003481882.1|	-	1.8e-10	40.7	0.6	4.3e-10	39.5	0.6	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Rubredoxin_2	PF18073.1	gi|289583473|ref|YP_003481883.1|	-	0.0072	16.0	0.4	0.0072	16.0	0.4	2.3	2	0	0	2	2	2	1	Rubredoxin	metal	binding	domain
HypA	PF01155.19	gi|289583473|ref|YP_003481883.1|	-	0.0098	15.9	1.4	0.017	15.1	0.9	1.4	1	1	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
HalOD2	PF18547.1	gi|289583473|ref|YP_003481883.1|	-	0.028	14.3	4.9	0.26	11.2	0.2	2.3	2	0	0	2	2	2	0	Halobacterial	output	domain	2
Zn-ribbon_8	PF09723.10	gi|289583473|ref|YP_003481883.1|	-	0.11	12.7	3.1	0.18	12.0	2.1	1.8	2	0	0	2	2	2	0	Zinc	ribbon	domain
VP_N-CPKC	PF11475.8	gi|289583473|ref|YP_003481883.1|	-	0.37	10.7	2.0	1	9.3	1.5	1.9	2	0	0	2	2	2	0	Virion	protein	N	terminal	domain
Rubredoxin	PF00301.20	gi|289583473|ref|YP_003481883.1|	-	0.83	9.7	7.7	0.67	10.0	1.7	2.5	1	1	1	2	2	2	0	Rubredoxin
MFS_1	PF07690.16	gi|289583474|ref|YP_003481884.1|	-	7.2e-09	35.0	60.1	0.00089	18.3	12.1	3.0	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Pyridox_ox_2	PF12900.7	gi|289583475|ref|YP_003481885.1|	-	2e-19	70.0	0.1	3.2e-19	69.3	0.1	1.3	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Putative_PNPOx	PF01243.20	gi|289583475|ref|YP_003481885.1|	-	0.0016	18.6	0.0	0.0024	18.0	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
CRISPR_Cse2	PF09485.10	gi|289583475|ref|YP_003481885.1|	-	0.16	12.5	0.0	0.26	11.8	0.0	1.5	1	1	0	1	1	1	0	CRISPR-associated	protein	Cse2	(CRISPR_cse2)
Ribonuc_L-PSP	PF01042.21	gi|289583476|ref|YP_003481886.1|	-	9.1e-38	129.0	0.0	1e-37	128.8	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
GGDEF	PF00990.21	gi|289583476|ref|YP_003481886.1|	-	0.055	13.2	0.0	0.072	12.8	0.0	1.2	1	0	0	1	1	1	0	Diguanylate	cyclase,	GGDEF	domain
Aminotran_3	PF00202.21	gi|289583477|ref|YP_003481887.1|	-	1.4e-101	340.1	0.0	1.7e-101	339.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
GAF_2	PF13185.6	gi|289583478|ref|YP_003481888.1|	-	5e-07	30.1	0.0	6.3e-07	29.8	0.0	1.1	1	0	0	1	1	1	1	GAF	domain
GAF	PF01590.26	gi|289583478|ref|YP_003481888.1|	-	0.0001	22.9	0.0	0.00011	22.8	0.0	1.1	1	0	0	1	1	1	1	GAF	domain
ADH_N	PF08240.12	gi|289583479|ref|YP_003481889.1|	-	9.8e-29	99.4	0.6	9.8e-29	99.4	0.6	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|289583479|ref|YP_003481889.1|	-	1.5e-23	83.2	0.4	3e-23	82.2	0.0	1.7	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|289583479|ref|YP_003481889.1|	-	1.3e-05	24.6	0.2	1.9e-05	24.1	0.2	1.2	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|289583479|ref|YP_003481889.1|	-	0.004	16.5	0.0	0.0071	15.7	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ADH_zinc_N_2	PF13602.6	gi|289583479|ref|YP_003481889.1|	-	0.013	16.6	0.0	0.026	15.6	0.0	1.6	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
adh_short	PF00106.25	gi|289583479|ref|YP_003481889.1|	-	0.077	12.5	0.1	0.12	11.8	0.1	1.3	1	0	0	1	1	1	0	short	chain	dehydrogenase
ELFV_dehydrog	PF00208.21	gi|289583479|ref|YP_003481889.1|	-	0.081	12.6	0.2	0.13	11.9	0.2	1.2	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Pyr_redox_2	PF07992.14	gi|289583480|ref|YP_003481890.1|	-	7.9e-19	68.0	9.0	3.4e-12	46.2	0.5	2.1	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583480|ref|YP_003481890.1|	-	1.6e-11	44.1	1.8	6.7e-06	25.6	0.1	2.8	1	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289583480|ref|YP_003481890.1|	-	8.2e-09	34.6	0.1	0.00015	20.6	0.0	2.2	2	0	0	2	2	2	2	HI0933-like	protein
DAO	PF01266.24	gi|289583480|ref|YP_003481890.1|	-	1.8e-07	31.1	0.3	0.0074	15.9	0.0	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|289583480|ref|YP_003481890.1|	-	8e-07	28.6	2.5	5.1e-05	22.7	0.0	2.1	1	1	1	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|289583480|ref|YP_003481890.1|	-	9.5e-06	24.9	0.3	3.1e-05	23.2	0.1	1.8	1	1	1	2	2	2	1	FAD	binding	domain
GIDA	PF01134.22	gi|289583480|ref|YP_003481890.1|	-	9.6e-06	24.9	1.3	8.3e-05	21.8	0.0	2.5	1	1	2	3	3	3	1	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.6	gi|289583480|ref|YP_003481890.1|	-	1.7e-05	24.9	0.2	0.016	15.2	0.1	2.4	2	0	0	2	2	2	2	FAD-NAD(P)-binding
NAD_binding_8	PF13450.6	gi|289583480|ref|YP_003481890.1|	-	4.2e-05	23.7	0.0	0.00014	22.0	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.7	gi|289583480|ref|YP_003481890.1|	-	0.00017	21.1	0.3	0.00038	19.9	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|289583480|ref|YP_003481890.1|	-	0.0043	16.4	0.0	0.0079	15.5	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.17	gi|289583480|ref|YP_003481890.1|	-	0.0043	16.3	0.1	0.012	14.9	0.0	1.8	2	0	0	2	2	2	1	Thi4	family
Lycopene_cycl	PF05834.12	gi|289583480|ref|YP_003481890.1|	-	0.022	13.8	0.1	0.058	12.4	0.0	1.6	1	1	1	2	2	2	0	Lycopene	cyclase	protein
3HCDH_N	PF02737.18	gi|289583480|ref|YP_003481890.1|	-	0.033	14.1	0.0	0.059	13.3	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|289583480|ref|YP_003481890.1|	-	0.06	13.9	0.4	0.54	10.9	0.1	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|289583480|ref|YP_003481890.1|	-	0.082	11.7	2.9	4.3	6.1	0.8	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
ADH_zinc_N_2	PF13602.6	gi|289583482|ref|YP_003481892.1|	-	2.1e-18	67.7	0.2	3.5e-18	66.9	0.2	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N	PF00107.26	gi|289583482|ref|YP_003481892.1|	-	4.9e-13	49.2	0.0	8.5e-13	48.4	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.12	gi|289583482|ref|YP_003481892.1|	-	2.4e-09	37.0	0.0	9.8e-09	35.1	0.0	2.0	1	1	1	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_N_2	PF16884.5	gi|289583482|ref|YP_003481892.1|	-	0.03	14.2	0.0	0.068	13.1	0.0	1.6	1	0	0	1	1	1	0	N-terminal	domain	of	oxidoreductase
Phage_integrase	PF00589.22	gi|289583483|ref|YP_003481893.1|	-	7.2e-10	38.9	0.0	1.9e-09	37.6	0.0	1.7	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|289583483|ref|YP_003481893.1|	-	0.082	13.4	0.1	1.1	9.8	0.0	2.3	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
FliS	PF02561.14	gi|289583483|ref|YP_003481893.1|	-	0.11	12.8	0.1	0.25	11.6	0.1	1.6	1	0	0	1	1	1	0	Flagellar	protein	FliS
Prok_Ub	PF14454.6	gi|289583483|ref|YP_003481893.1|	-	0.12	12.0	0.0	0.35	10.6	0.0	1.7	1	0	0	1	1	1	0	Prokaryotic	Ubiquitin
Phage_int_SAM_1	PF02899.17	gi|289583483|ref|YP_003481893.1|	-	5.4	7.4	8.3	13	6.1	5.2	2.8	2	1	1	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
DUF202	PF02656.15	gi|289583484|ref|YP_003481894.1|	-	1.8	9.0	4.3	2.1	8.8	2.3	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
DUF202	PF02656.15	gi|289583485|ref|YP_003481895.1|	-	0.88	10.1	5.5	3.2	8.3	1.6	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
DDE_Tnp_1	PF01609.21	gi|289583486|ref|YP_003481896.1|	-	5e-07	29.6	4.2	2.8e-06	27.1	2.3	2.7	2	1	0	2	2	2	1	Transposase	DDE	domain
Gp_dh_C	PF02800.20	gi|289583487|ref|YP_003481897.1|	-	4.5e-53	179.1	0.0	6.1e-53	178.6	0.0	1.2	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.24	gi|289583487|ref|YP_003481897.1|	-	1.3e-31	108.9	0.0	2.8e-31	107.8	0.0	1.6	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ADH_zinc_N	PF00107.26	gi|289583487|ref|YP_003481897.1|	-	0.045	13.7	0.0	0.087	12.8	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
PGK	PF00162.19	gi|289583488|ref|YP_003481898.1|	-	2.8e-99	332.6	0.0	3.3e-99	332.4	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
ABC1	PF03109.16	gi|289583490|ref|YP_003481900.1|	-	1.6e-20	73.4	0.0	3e-20	72.6	0.0	1.4	1	0	0	1	1	1	1	ABC1	family
APH	PF01636.23	gi|289583490|ref|YP_003481900.1|	-	0.00052	20.0	0.5	1.3	8.9	0.1	3.4	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Pkinase	PF00069.25	gi|289583490|ref|YP_003481900.1|	-	0.0075	15.7	0.0	0.012	15.0	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Usp	PF00582.26	gi|289583491|ref|YP_003481901.1|	-	1.4e-44	152.1	8.1	2e-22	80.2	1.8	2.1	2	0	0	2	2	2	2	Universal	stress	protein	family
Usp	PF00582.26	gi|289583492|ref|YP_003481902.1|	-	4.3e-08	33.8	0.5	5.6e-08	33.4	0.5	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
RepA_N	PF06970.11	gi|289583492|ref|YP_003481902.1|	-	0.047	13.6	0.0	0.072	13.0	0.0	1.2	1	0	0	1	1	1	0	Replication	initiator	protein	A	(RepA)	N-terminus
SPC25	PF06703.11	gi|289583494|ref|YP_003481904.1|	-	0.016	15.0	0.1	0.016	15.0	0.1	1.1	1	0	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
COX2	PF00116.20	gi|289583495|ref|YP_003481905.1|	-	3.2e-10	39.9	0.0	5.8e-10	39.1	0.0	1.4	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.6	gi|289583495|ref|YP_003481905.1|	-	8.5e-09	35.5	1.0	2.6e-08	33.9	0.1	2.1	2	1	0	2	2	2	1	Cupredoxin-like	domain
DUF5001	PF16392.5	gi|289583495|ref|YP_003481905.1|	-	0.1	12.5	0.6	5.1	7.1	0.2	2.8	3	0	0	3	3	3	0	Ig-like	domain
DUF1616	PF07760.11	gi|289583495|ref|YP_003481905.1|	-	0.18	11.2	1.0	0.31	10.4	1.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1616)
FixG_C	PF11614.8	gi|289583495|ref|YP_003481905.1|	-	0.27	11.5	1.7	2.2	8.5	0.8	2.6	2	1	0	2	2	2	0	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
fn3_5	PF06280.12	gi|289583495|ref|YP_003481905.1|	-	0.36	11.5	5.1	19	6.0	0.6	3.5	1	1	1	3	3	3	0	Fn3-like	domain
Copper-bind	PF00127.20	gi|289583495|ref|YP_003481905.1|	-	0.49	10.9	4.4	1.9	9.0	0.8	2.9	2	1	0	2	2	2	0	Copper	binding	proteins,	plastocyanin/azurin	family
COX1	PF00115.20	gi|289583496|ref|YP_003481906.1|	-	7.1e-89	298.6	51.4	7.1e-89	298.6	51.4	1.8	1	1	1	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
FixQ	PF05545.11	gi|289583497|ref|YP_003481907.1|	-	0.2	11.7	3.1	0.35	10.9	0.0	2.1	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Tmemb_170	PF10190.9	gi|289583498|ref|YP_003481908.1|	-	0.065	13.6	0.4	0.077	13.4	0.4	1.1	1	0	0	1	1	1	0	Putative	transmembrane	protein	170
DUF389	PF04087.14	gi|289583499|ref|YP_003481909.1|	-	7.3e-34	116.8	15.4	7.3e-34	116.8	15.4	2.6	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF389)
DUF2007	PF09413.10	gi|289583499|ref|YP_003481909.1|	-	0.0061	16.7	0.0	0.062	13.5	0.0	2.5	2	0	0	2	2	2	1	Putative	prokaryotic	signal	transducing	protein
Glyco_transf_21	PF13506.6	gi|289583500|ref|YP_003481910.1|	-	4.2e-09	36.1	0.0	7.6e-09	35.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glycos_transf_2	PF00535.26	gi|289583500|ref|YP_003481910.1|	-	2.5e-05	24.2	0.0	5.4e-05	23.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|289583500|ref|YP_003481910.1|	-	0.00031	20.7	0.0	0.00045	20.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Usp	PF00582.26	gi|289583501|ref|YP_003481911.1|	-	1.1e-28	100.5	1.5	1.3e-28	100.3	1.5	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
AP_endonuc_2	PF01261.24	gi|289583501|ref|YP_003481911.1|	-	0.017	14.6	0.1	0.023	14.2	0.1	1.1	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
CBS	PF00571.28	gi|289583502|ref|YP_003481912.1|	-	5.4e-38	129.2	8.2	6e-11	42.6	0.7	4.3	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.19	gi|289583502|ref|YP_003481912.1|	-	0.12	13.2	0.1	0.35	11.7	0.0	1.7	2	0	0	2	2	2	0	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
OrfB_Zn_ribbon	PF07282.11	gi|289583503|ref|YP_003481913.1|	-	4.1e-18	65.1	2.0	9.6e-18	63.9	2.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF1660	PF07874.11	gi|289583504|ref|YP_003481914.1|	-	0.034	14.6	0.1	0.047	14.2	0.1	1.2	1	0	0	1	1	1	0	Prophage	protein	(DUF1660)
ThiF	PF00899.21	gi|289583505|ref|YP_003481915.1|	-	1.6e-58	198.0	0.0	2e-58	197.6	0.0	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|289583505|ref|YP_003481915.1|	-	0.00026	21.3	1.2	0.0012	19.1	1.2	1.8	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
PglD_N	PF17836.1	gi|289583505|ref|YP_003481915.1|	-	0.019	15.6	0.3	0.037	14.7	0.3	1.5	1	0	0	1	1	1	0	PglD	N-terminal	domain
Shikimate_DH	PF01488.20	gi|289583505|ref|YP_003481915.1|	-	0.092	12.8	0.2	0.14	12.2	0.2	1.4	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|289583505|ref|YP_003481915.1|	-	0.11	12.1	0.1	0.18	11.5	0.1	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Usp	PF00582.26	gi|289583506|ref|YP_003481916.1|	-	1.6e-48	164.8	17.8	1.5e-24	87.1	3.0	2.4	2	1	0	2	2	2	2	Universal	stress	protein	family
Fe-ADH	PF00465.19	gi|289583507|ref|YP_003481917.1|	-	4.3e-65	219.9	7.1	5.1e-65	219.7	7.1	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.6	gi|289583507|ref|YP_003481917.1|	-	3.4e-32	112.1	1.7	4.3e-32	111.8	1.7	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DAGK_cat	PF00781.24	gi|289583508|ref|YP_003481918.1|	-	4e-22	78.2	0.4	7.2e-22	77.3	0.4	1.5	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
NAD_kinase	PF01513.21	gi|289583508|ref|YP_003481918.1|	-	0.2	10.8	1.1	0.28	10.3	1.1	1.2	1	0	0	1	1	1	0	ATP-NAD	kinase
PAC2	PF09754.9	gi|289583509|ref|YP_003481919.1|	-	5.7e-36	124.5	0.3	6.8e-36	124.3	0.3	1.1	1	0	0	1	1	1	1	PAC2	family
FlxA	PF14282.6	gi|289583509|ref|YP_003481919.1|	-	0.081	12.9	15.2	0.14	12.2	15.2	1.3	1	0	0	1	1	1	0	FlxA-like	protein
DUF2924	PF11149.8	gi|289583509|ref|YP_003481919.1|	-	0.09	13.2	0.1	2.4	8.5	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2924)
Usp	PF00582.26	gi|289583510|ref|YP_003481920.1|	-	6.5e-56	188.8	13.2	1.6e-29	103.2	0.9	2.6	3	0	0	3	3	3	2	Universal	stress	protein	family
Fer2	PF00111.27	gi|289583510|ref|YP_003481920.1|	-	2.4e-11	43.4	0.4	9.4e-11	41.5	0.4	2.1	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
B12-binding	PF02310.19	gi|289583510|ref|YP_003481920.1|	-	0.00064	19.7	1.5	0.86	9.6	0.1	3.4	2	1	0	3	3	3	2	B12	binding	domain
Lactamase_B_4	PF13691.6	gi|289583510|ref|YP_003481920.1|	-	0.014	15.1	0.1	3	7.6	0.0	2.4	2	0	0	2	2	2	0	tRNase	Z	endonuclease
Toprim_4	PF13662.6	gi|289583510|ref|YP_003481920.1|	-	0.067	13.7	0.4	7.2	7.2	0.0	2.7	2	0	0	2	2	2	0	Toprim	domain
IF3_N	PF05198.16	gi|289583510|ref|YP_003481920.1|	-	0.31	11.4	2.2	28	5.1	0.0	4.0	2	2	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Ferric_reduct	PF01794.19	gi|289583511|ref|YP_003481921.1|	-	3e-05	24.2	11.6	3e-05	24.2	11.6	2.5	3	0	0	3	3	3	1	Ferric	reductase	like	transmembrane	component
Vpu	PF00558.19	gi|289583511|ref|YP_003481921.1|	-	3.9	7.3	5.1	8.4	6.2	0.1	3.2	3	0	0	3	3	3	0	Vpu	protein
Voltage_CLC	PF00654.20	gi|289583512|ref|YP_003481922.1|	-	1.3e-85	287.8	40.0	1.7e-85	287.4	30.4	2.1	1	1	1	2	2	2	2	Voltage	gated	chloride	channel
E1-E2_ATPase	PF00122.20	gi|289583513|ref|YP_003481923.1|	-	2e-51	174.1	4.5	2e-51	174.1	4.5	3.6	4	0	0	4	4	4	1	E1-E2	ATPase
Cation_ATPase_C	PF00689.21	gi|289583513|ref|YP_003481923.1|	-	1.7e-39	135.5	6.2	1.7e-39	135.5	6.2	2.1	3	0	0	3	3	3	1	Cation	transporting	ATPase,	C-terminus
Cation_ATPase	PF13246.6	gi|289583513|ref|YP_003481923.1|	-	1.2e-23	83.0	0.0	2.2e-23	82.1	0.0	1.5	1	0	0	1	1	1	1	Cation	transport	ATPase	(P-type)
Hydrolase	PF00702.26	gi|289583513|ref|YP_003481923.1|	-	7.9e-23	81.8	3.5	3.9e-22	79.6	3.5	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.26	gi|289583513|ref|YP_003481923.1|	-	7e-19	67.3	0.0	1.3e-18	66.4	0.0	1.5	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
HAD	PF12710.7	gi|289583513|ref|YP_003481923.1|	-	0.0021	18.5	0.1	0.0063	16.9	0.1	1.9	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|289583513|ref|YP_003481923.1|	-	0.0038	17.0	0.3	0.038	13.7	0.3	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Usp	PF00582.26	gi|289583515|ref|YP_003481925.1|	-	3.9e-29	102.0	0.2	4.9e-29	101.6	0.2	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
DUF2267	PF10025.9	gi|289583516|ref|YP_003481926.1|	-	1.2e-37	128.9	0.4	1.4e-37	128.7	0.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2267)
Bac_DNA_binding	PF00216.21	gi|289583516|ref|YP_003481926.1|	-	0.088	13.0	0.0	5.8	7.2	0.0	2.1	2	0	0	2	2	2	0	Bacterial	DNA-binding	protein
Usp	PF00582.26	gi|289583517|ref|YP_003481927.1|	-	2.5e-48	164.2	3.3	6.8e-24	85.0	0.2	2.0	2	0	0	2	2	2	2	Universal	stress	protein	family
Sulfatase	PF00884.23	gi|289583518|ref|YP_003481928.1|	-	1.2e-43	149.7	0.0	1.8e-43	149.1	0.0	1.3	1	0	0	1	1	1	1	Sulfatase
Phosphodiest	PF01663.22	gi|289583518|ref|YP_003481928.1|	-	3.2e-11	43.4	0.1	1.3e-10	41.5	0.1	1.9	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF4976	PF16347.5	gi|289583518|ref|YP_003481928.1|	-	3.1e-09	37.0	2.1	0.00048	20.3	0.9	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4976)
DUF1501	PF07394.12	gi|289583518|ref|YP_003481928.1|	-	0.00048	19.3	0.1	0.00081	18.6	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1501)
DUF229	PF02995.17	gi|289583518|ref|YP_003481928.1|	-	0.019	13.6	0.0	0.026	13.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF229)
Metalloenzyme	PF01676.18	gi|289583518|ref|YP_003481928.1|	-	0.022	14.1	0.0	0.048	13.0	0.0	1.4	2	0	0	2	2	2	0	Metalloenzyme	superfamily
ADP_PFK_GK	PF04587.15	gi|289583519|ref|YP_003481929.1|	-	1.4e-84	284.1	0.0	1.6e-84	284.0	0.0	1.0	1	0	0	1	1	1	1	ADP-specific	Phosphofructokinase/Glucokinase	conserved	region
FBPase	PF00316.20	gi|289583520|ref|YP_003481930.1|	-	1.1e-23	83.7	0.2	1.5e-23	83.2	0.2	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
Inositol_P	PF00459.25	gi|289583520|ref|YP_003481930.1|	-	0.018	14.5	0.2	0.03	13.8	0.2	1.3	1	0	0	1	1	1	0	Inositol	monophosphatase	family
PPDK_N	PF01326.19	gi|289583522|ref|YP_003481932.1|	-	1e-111	373.4	0.0	1.4e-111	372.9	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|289583522|ref|YP_003481932.1|	-	2.7e-55	187.6	0.0	4e-55	187.0	0.0	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|289583522|ref|YP_003481932.1|	-	6.4e-27	93.1	1.8	9.1e-27	92.6	0.7	1.9	2	0	0	2	2	2	1	PEP-utilising	enzyme,	mobile	domain
NTP_transferase	PF00483.23	gi|289583523|ref|YP_003481933.1|	-	2e-36	125.9	0.0	2.5e-36	125.5	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|289583523|ref|YP_003481933.1|	-	5.7e-13	49.5	0.0	7.2e-13	49.2	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|289583523|ref|YP_003481933.1|	-	0.023	14.4	0.0	0.046	13.4	0.0	1.5	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Usp	PF00582.26	gi|289583524|ref|YP_003481934.1|	-	2.4e-61	206.4	5.3	5.1e-30	104.8	0.1	2.0	2	0	0	2	2	2	2	Universal	stress	protein	family
MDMPI_N	PF11716.8	gi|289583524|ref|YP_003481934.1|	-	0.0095	16.6	0.9	0.0095	16.6	0.9	2.4	2	1	0	2	2	2	1	Mycothiol	maleylpyruvate	isomerase	N-terminal	domain
Ag332	PF04671.12	gi|289583524|ref|YP_003481934.1|	-	0.079	12.9	0.1	4	7.5	0.0	2.5	2	0	0	2	2	2	0	Erythrocyte	membrane-associated	giant	protein	antigen	332
AP_endonuc_2	PF01261.24	gi|289583524|ref|YP_003481934.1|	-	0.086	12.3	0.4	1	8.8	0.1	2.3	2	1	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
Glycos_transf_1	PF00534.20	gi|289583525|ref|YP_003481935.1|	-	1.3e-28	99.7	0.0	2e-28	99.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289583525|ref|YP_003481935.1|	-	2.5e-15	57.1	0.0	5.1e-15	56.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|289583525|ref|YP_003481935.1|	-	1.1e-07	32.2	0.0	3.6e-07	30.5	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
HTH_10	PF04967.12	gi|289583526|ref|YP_003481936.1|	-	5.6e-17	61.3	0.3	9e-17	60.6	0.3	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4_2	PF08281.12	gi|289583526|ref|YP_003481936.1|	-	2.8e-05	23.7	1.5	0.00015	21.3	0.5	2.4	2	1	0	2	2	2	1	Sigma-70,	region	4
Sigma70_r4	PF04545.16	gi|289583526|ref|YP_003481936.1|	-	0.00024	20.5	0.2	0.00059	19.3	0.2	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.6	gi|289583526|ref|YP_003481936.1|	-	0.011	15.7	0.1	0.037	14.0	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn	helix
Coat_F	PF07875.12	gi|289583526|ref|YP_003481936.1|	-	0.092	13.0	0.0	0.2	11.9	0.0	1.5	1	0	0	1	1	1	0	Coat	F	domain
Rep_1B	PF17873.1	gi|289583526|ref|YP_003481936.1|	-	0.11	12.4	0.0	0.24	11.3	0.0	1.5	1	0	0	1	1	1	0	Replicase	polyprotein	1ab
HTH_CodY	PF08222.11	gi|289583526|ref|YP_003481936.1|	-	0.2	11.2	0.3	0.42	10.2	0.1	1.6	2	0	0	2	2	2	0	CodY	helix-turn-helix	domain
Urocanase_C	PF17392.2	gi|289583527|ref|YP_003481937.1|	-	3.6e-88	294.1	0.1	5.8e-88	293.5	0.1	1.3	1	0	0	1	1	1	1	Urocanase	C-terminal	domain
Urocanase	PF01175.18	gi|289583527|ref|YP_003481937.1|	-	7.6e-83	277.3	0.0	1e-82	276.9	0.0	1.2	1	0	0	1	1	1	1	Urocanase	Rossmann-like	domain
Urocanase_N	PF17391.2	gi|289583527|ref|YP_003481937.1|	-	1.2e-58	196.3	0.0	2.1e-58	195.5	0.0	1.4	1	0	0	1	1	1	1	Urocanase	N-terminal	domain
Arginase	PF00491.21	gi|289583528|ref|YP_003481938.1|	-	1.2e-57	195.6	2.3	1.3e-57	195.4	2.3	1.0	1	0	0	1	1	1	1	Arginase	family
Amidohydro_3	PF07969.11	gi|289583529|ref|YP_003481939.1|	-	1.1e-14	54.8	4.8	2.2e-07	30.7	0.9	2.3	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|289583529|ref|YP_003481939.1|	-	1.3e-09	37.9	0.2	4.3e-09	36.1	0.1	1.9	2	1	0	2	2	2	1	Amidohydrolase	family
Lyase_aromatic	PF00221.19	gi|289583530|ref|YP_003481940.1|	-	4.2e-184	612.6	15.6	4.8e-184	612.4	15.6	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
Aldedh	PF00171.22	gi|289583531|ref|YP_003481941.1|	-	2.1e-165	550.7	0.0	2.5e-165	550.5	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
PGM_PMM_I	PF02878.16	gi|289583532|ref|YP_003481942.1|	-	8.7e-35	119.4	0.0	1.5e-34	118.6	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|289583532|ref|YP_003481942.1|	-	4.9e-24	84.9	0.3	1.1e-22	80.6	0.1	2.6	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|289583532|ref|YP_003481942.1|	-	2.4e-22	79.3	0.0	4.4e-22	78.4	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|289583532|ref|YP_003481942.1|	-	4.3e-12	46.0	0.0	1e-11	44.8	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
ROK	PF00480.20	gi|289583533|ref|YP_003481943.1|	-	1.8e-45	155.7	0.9	2.2e-45	155.4	0.9	1.0	1	0	0	1	1	1	1	ROK	family
BcrAD_BadFG	PF01869.20	gi|289583533|ref|YP_003481943.1|	-	8.5e-07	28.7	2.5	1.5e-06	27.9	2.5	1.4	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FGGY_N	PF00370.21	gi|289583533|ref|YP_003481943.1|	-	1.1e-05	25.2	0.0	1.9e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
PEP-CTERM	PF07589.11	gi|289583533|ref|YP_003481943.1|	-	0.16	12.1	0.6	0.52	10.5	0.6	1.9	1	0	0	1	1	1	0	PEP-CTERM	motif
Aldedh	PF00171.22	gi|289583534|ref|YP_003481944.1|	-	8.6e-149	496.0	0.3	1.1e-148	495.7	0.3	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|289583534|ref|YP_003481944.1|	-	3.8e-07	29.5	0.0	1.3e-06	27.7	0.0	1.8	2	0	0	2	2	2	1	Acyl-CoA	reductase	(LuxC)
Cupin_3	PF05899.12	gi|289583535|ref|YP_003481945.1|	-	9.8e-27	92.5	2.5	1.3e-26	92.1	2.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
Cupin_2	PF07883.11	gi|289583535|ref|YP_003481945.1|	-	6.3e-05	22.6	0.1	0.0001	21.9	0.1	1.3	1	0	0	1	1	1	1	Cupin	domain
Glyco_tran_28_C	PF04101.16	gi|289583536|ref|YP_003481946.1|	-	4e-13	49.7	0.0	5.5e-13	49.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
UDPGT	PF00201.18	gi|289583536|ref|YP_003481946.1|	-	8.6e-11	41.3	0.0	3.6e-10	39.3	0.0	1.7	2	0	0	2	2	2	1	UDP-glucoronosyl	and	UDP-glucosyl	transferase
IclR	PF01614.18	gi|289583537|ref|YP_003481947.1|	-	1.7e-19	69.9	0.0	3.2e-19	69.1	0.0	1.4	1	0	0	1	1	1	1	Bacterial	transcriptional	regulator
HTH_IclR	PF09339.10	gi|289583537|ref|YP_003481947.1|	-	1.3e-08	34.5	0.0	4.2e-06	26.5	0.0	3.3	3	0	0	3	3	3	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583537|ref|YP_003481947.1|	-	1.7e-07	30.6	0.0	6e-06	25.7	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|289583537|ref|YP_003481947.1|	-	0.0017	18.2	0.0	0.0049	16.8	0.0	1.8	2	0	0	2	2	1	1	MarR	family
HTH_20	PF12840.7	gi|289583537|ref|YP_003481947.1|	-	0.0063	16.5	0.2	0.027	14.5	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|289583537|ref|YP_003481947.1|	-	0.019	14.8	0.0	0.14	12.1	0.0	2.4	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
HTH_AsnC-type	PF13404.6	gi|289583537|ref|YP_003481947.1|	-	0.053	13.4	0.0	0.86	9.5	0.0	2.3	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289583537|ref|YP_003481947.1|	-	0.056	13.3	0.0	0.46	10.4	0.0	2.2	2	0	0	2	2	2	0	MarR	family
HTH_11	PF08279.12	gi|289583537|ref|YP_003481947.1|	-	0.07	13.1	0.0	0.43	10.6	0.0	2.3	3	0	0	3	3	3	0	HTH	domain
TrmB	PF01978.19	gi|289583537|ref|YP_003481947.1|	-	0.089	12.7	0.0	1.8	8.5	0.0	2.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_10	PF04967.12	gi|289583537|ref|YP_003481947.1|	-	0.13	12.1	0.1	0.51	10.2	0.1	2.0	2	0	0	2	2	2	0	HTH	DNA	binding	domain
HTH_DeoR	PF08220.12	gi|289583537|ref|YP_003481947.1|	-	0.14	11.9	0.1	1.2	8.9	0.0	2.4	3	0	0	3	3	3	0	DeoR-like	helix-turn-helix	domain
RNA_lig_T4_1	PF09511.10	gi|289583537|ref|YP_003481947.1|	-	0.17	11.7	0.0	0.44	10.4	0.0	1.7	3	0	0	3	3	3	0	RNA	ligase
DAO	PF01266.24	gi|289583538|ref|YP_003481948.1|	-	5.6e-52	177.5	2.6	6.3e-52	177.3	2.6	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583538|ref|YP_003481948.1|	-	2e-07	30.5	1.3	1.6e-06	27.5	1.3	2.0	1	1	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|289583538|ref|YP_003481948.1|	-	1.4e-06	27.8	0.5	0.033	13.4	0.0	2.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289583538|ref|YP_003481948.1|	-	0.0007	19.8	0.1	0.0024	18.0	0.1	2.0	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|289583538|ref|YP_003481948.1|	-	0.0008	19.9	0.2	0.056	14.0	0.2	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.24	gi|289583538|ref|YP_003481948.1|	-	0.0023	17.3	0.0	0.003	16.9	0.0	1.1	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Trp_halogenase	PF04820.14	gi|289583538|ref|YP_003481948.1|	-	0.0054	15.6	1.3	0.035	13.0	0.1	2.0	2	0	0	2	2	2	1	Tryptophan	halogenase
HI0933_like	PF03486.14	gi|289583538|ref|YP_003481948.1|	-	0.082	11.6	0.6	1.4	7.5	0.0	2.0	2	0	0	2	2	2	0	HI0933-like	protein
NAD_binding_9	PF13454.6	gi|289583538|ref|YP_003481948.1|	-	0.24	11.4	1.7	8.8	6.3	0.1	2.3	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Aminotran_3	PF00202.21	gi|289583540|ref|YP_003481950.1|	-	9.5e-69	232.0	0.0	1.2e-68	231.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
GATase	PF00117.28	gi|289583541|ref|YP_003481951.1|	-	2.4e-19	69.9	0.0	3.2e-19	69.5	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|289583541|ref|YP_003481951.1|	-	1.1e-09	38.4	1.0	2.8e-08	33.8	1.0	2.4	1	1	0	1	1	1	1	Peptidase	C26
DAO	PF01266.24	gi|289583542|ref|YP_003481952.1|	-	1e-55	189.7	6.7	1.3e-55	189.4	6.7	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583542|ref|YP_003481952.1|	-	5.6e-13	48.7	2.6	8e-13	48.2	2.6	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|289583542|ref|YP_003481952.1|	-	9.6e-11	41.4	0.1	0.00024	20.5	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.24	gi|289583542|ref|YP_003481952.1|	-	1.6e-07	31.0	0.4	0.0003	20.2	0.0	2.2	2	0	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
HI0933_like	PF03486.14	gi|289583542|ref|YP_003481952.1|	-	1.8e-05	23.7	0.8	0.04	12.6	0.0	2.1	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_3	PF13738.6	gi|289583542|ref|YP_003481952.1|	-	1.9e-05	24.1	0.5	0.056	12.7	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289583542|ref|YP_003481952.1|	-	2.3e-05	24.6	0.8	2.3e-05	24.6	0.8	2.3	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|289583542|ref|YP_003481952.1|	-	7.2e-05	22.2	6.5	0.0052	16.1	0.3	2.4	3	0	0	3	3	3	2	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|289583542|ref|YP_003481952.1|	-	0.00019	20.4	1.8	0.034	13.0	0.6	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox	PF00070.27	gi|289583542|ref|YP_003481952.1|	-	0.00038	21.0	0.7	0.59	10.7	0.3	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|289583542|ref|YP_003481952.1|	-	0.00089	18.6	0.3	0.0018	17.6	0.1	1.5	2	0	0	2	2	2	1	Thi4	family
GMC_oxred_N	PF00732.19	gi|289583542|ref|YP_003481952.1|	-	0.0052	16.2	0.1	0.34	10.2	0.0	2.1	2	0	0	2	2	2	1	GMC	oxidoreductase
NAD_binding_9	PF13454.6	gi|289583542|ref|YP_003481952.1|	-	0.013	15.5	5.6	1.1	9.2	0.4	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
GIDA	PF01134.22	gi|289583542|ref|YP_003481952.1|	-	0.05	12.7	3.0	3.3	6.7	0.9	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.12	gi|289583542|ref|YP_003481952.1|	-	0.051	12.6	1.0	1	8.4	0.3	2.1	2	0	0	2	2	2	0	Lycopene	cyclase	protein
TrkA_N	PF02254.18	gi|289583542|ref|YP_003481952.1|	-	0.075	13.3	0.1	0.13	12.5	0.1	1.4	1	0	0	1	1	1	0	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|289583542|ref|YP_003481952.1|	-	0.12	12.8	0.0	0.2	12.1	0.0	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289583542|ref|YP_003481952.1|	-	0.13	11.5	0.2	0.22	10.8	0.2	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_oxidored	PF12831.7	gi|289583542|ref|YP_003481952.1|	-	0.62	9.3	3.6	9.5	5.4	3.6	2.1	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
Gln-synt_C	PF00120.24	gi|289583543|ref|YP_003481953.1|	-	3.5e-94	315.6	0.0	4.1e-94	315.4	0.0	1.0	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|289583543|ref|YP_003481953.1|	-	0.0016	18.1	0.0	0.0045	16.7	0.0	1.7	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
SBP_bac_8	PF13416.6	gi|289583544|ref|YP_003481954.1|	-	5e-25	88.9	7.0	5e-25	88.9	7.0	1.5	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|289583544|ref|YP_003481954.1|	-	3.1e-17	62.8	0.2	4.6e-17	62.3	0.2	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|289583544|ref|YP_003481954.1|	-	3.1e-11	43.8	4.7	5.4e-11	43.0	4.7	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.6	gi|289583544|ref|YP_003481954.1|	-	5.1e-06	26.4	0.0	0.029	14.1	0.0	2.1	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
TAT_signal	PF10518.9	gi|289583544|ref|YP_003481954.1|	-	0.00041	20.1	6.0	0.0006	19.6	6.0	1.2	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
UCR_Fe-S_N	PF10399.9	gi|289583544|ref|YP_003481954.1|	-	0.0028	17.0	0.8	0.0051	16.1	0.8	1.3	1	0	0	1	1	1	1	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
ABC_tran	PF00005.27	gi|289583545|ref|YP_003481955.1|	-	3.7e-36	124.7	0.0	6.5e-36	123.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.10	gi|289583545|ref|YP_003481955.1|	-	4.2e-15	55.7	0.1	1.1e-14	54.4	0.1	1.8	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|289583545|ref|YP_003481955.1|	-	5.6e-05	23.1	0.1	0.05	13.4	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
CysA_C_terminal	PF17850.1	gi|289583545|ref|YP_003481955.1|	-	0.00044	20.8	0.0	0.097	13.2	0.0	3.0	2	0	0	2	2	2	1	CysA	C-terminal	regulatory	domain
OB_MalK	PF17912.1	gi|289583545|ref|YP_003481955.1|	-	0.00089	20.0	0.0	0.006	17.4	0.0	2.4	2	0	0	2	2	2	1	MalK	OB	fold	domain
AAA_22	PF13401.6	gi|289583545|ref|YP_003481955.1|	-	0.0062	16.8	1.1	0.024	14.9	1.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289583545|ref|YP_003481955.1|	-	0.0062	16.9	0.0	0.0096	16.3	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|289583545|ref|YP_003481955.1|	-	0.013	15.9	0.5	0.054	13.9	0.5	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Big_7	PF17957.1	gi|289583545|ref|YP_003481955.1|	-	0.015	16.0	1.0	0.044	14.5	0.3	2.1	2	0	0	2	2	2	0	Bacterial	Ig	domain
PhoH	PF02562.16	gi|289583545|ref|YP_003481955.1|	-	0.017	14.6	0.2	5.9	6.3	0.0	2.2	2	0	0	2	2	2	0	PhoH-like	protein
Rad17	PF03215.15	gi|289583545|ref|YP_003481955.1|	-	0.019	14.9	0.0	0.034	14.1	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|289583545|ref|YP_003481955.1|	-	0.024	14.5	0.0	0.051	13.5	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_28	PF13521.6	gi|289583545|ref|YP_003481955.1|	-	0.035	14.3	0.4	0.42	10.8	0.2	2.2	2	0	0	2	2	2	0	AAA	domain
DUF3060	PF11259.8	gi|289583545|ref|YP_003481955.1|	-	0.045	13.4	1.0	0.14	11.9	1.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3060)
AAA_30	PF13604.6	gi|289583545|ref|YP_003481955.1|	-	0.051	13.3	0.1	0.088	12.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|289583545|ref|YP_003481955.1|	-	0.057	13.9	0.7	0.11	12.9	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
DUF1905	PF08922.11	gi|289583545|ref|YP_003481955.1|	-	0.13	12.3	0.2	0.78	9.8	0.0	2.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1905)
AAA_19	PF13245.6	gi|289583545|ref|YP_003481955.1|	-	0.15	12.4	0.6	0.73	10.2	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
TniB	PF05621.11	gi|289583545|ref|YP_003481955.1|	-	0.19	11.1	0.5	2.6	7.4	0.2	2.1	2	0	0	2	2	2	0	Bacterial	TniB	protein
BPD_transp_1	PF00528.22	gi|289583546|ref|YP_003481956.1|	-	5.6e-13	49.0	33.4	8e-11	42.0	33.4	2.6	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|289583547|ref|YP_003481957.1|	-	1.1e-15	57.9	17.3	1.1e-15	57.9	17.3	2.1	1	1	1	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
Oxidored_FMN	PF00724.20	gi|289583548|ref|YP_003481958.1|	-	3e-67	227.3	0.0	4.6e-67	226.7	0.0	1.3	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Pyr_redox_2	PF07992.14	gi|289583548|ref|YP_003481958.1|	-	2.4e-13	50.0	2.0	2.3e-12	46.7	2.0	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289583548|ref|YP_003481958.1|	-	1.2e-11	44.6	0.9	5.7e-11	42.5	0.9	2.2	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|289583548|ref|YP_003481958.1|	-	3.5e-10	39.2	0.1	1.8e-07	30.2	0.2	2.5	3	0	0	3	3	3	2	HI0933-like	protein
Pyr_redox	PF00070.27	gi|289583548|ref|YP_003481958.1|	-	1.8e-08	34.8	0.3	6.8e-05	23.4	0.1	2.7	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|289583548|ref|YP_003481958.1|	-	1.6e-07	31.0	2.0	1.6e-07	31.0	2.0	1.8	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583548|ref|YP_003481958.1|	-	2.1e-07	30.5	0.1	0.00066	19.0	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583548|ref|YP_003481958.1|	-	3.8e-07	29.5	8.3	2.1e-05	23.8	8.3	3.1	1	1	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|289583548|ref|YP_003481958.1|	-	7.3e-07	29.1	11.4	0.0039	16.8	11.4	3.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.24	gi|289583548|ref|YP_003481958.1|	-	3.7e-05	23.2	0.5	3.7e-05	23.2	0.5	2.3	2	1	1	3	3	3	1	Flavin	containing	amine	oxidoreductase
GIDA	PF01134.22	gi|289583548|ref|YP_003481958.1|	-	0.00015	21.0	0.8	0.00028	20.1	0.8	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.19	gi|289583548|ref|YP_003481958.1|	-	0.0063	15.8	0.3	0.0063	15.8	0.3	1.8	3	0	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.17	gi|289583548|ref|YP_003481958.1|	-	0.017	14.4	0.0	0.035	13.4	0.0	1.4	1	0	0	1	1	1	0	Thi4	family
NAD_binding_9	PF13454.6	gi|289583548|ref|YP_003481958.1|	-	0.017	15.1	6.0	4	7.4	0.3	3.9	3	1	1	4	4	4	0	FAD-NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289583548|ref|YP_003481958.1|	-	0.061	12.6	0.4	0.12	11.7	0.4	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|289583548|ref|YP_003481958.1|	-	0.15	12.0	1.3	0.28	11.0	0.2	2.0	2	1	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Trp_halogenase	PF04820.14	gi|289583548|ref|YP_003481958.1|	-	0.19	10.6	0.3	0.31	9.8	0.3	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
MCPsignal	PF00015.21	gi|289583549|ref|YP_003481959.1|	-	5e-34	117.6	19.4	5e-34	117.6	19.4	2.8	1	1	1	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
PAS_3	PF08447.12	gi|289583549|ref|YP_003481959.1|	-	7.7e-16	58.2	0.1	1.6e-15	57.1	0.1	1.6	1	0	0	1	1	1	1	PAS	fold
FPP	PF05911.11	gi|289583549|ref|YP_003481959.1|	-	5e-06	25.0	9.1	6.5e-06	24.6	9.1	1.0	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
DUF948	PF06103.11	gi|289583549|ref|YP_003481959.1|	-	0.00055	20.1	25.5	0.0058	16.8	0.9	4.3	3	1	1	4	4	4	2	Bacterial	protein	of	unknown	function	(DUF948)
Fib_alpha	PF08702.10	gi|289583549|ref|YP_003481959.1|	-	0.0012	19.0	9.9	0.1	12.8	1.7	2.8	2	2	0	2	2	2	2	Fibrinogen	alpha/beta	chain	family
MscS_porin	PF12795.7	gi|289583549|ref|YP_003481959.1|	-	0.002	17.7	13.1	0.0021	17.7	4.6	2.4	2	0	0	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
Tropomyosin	PF00261.20	gi|289583549|ref|YP_003481959.1|	-	0.0041	16.5	21.3	0.07	12.5	4.7	2.6	2	0	0	2	2	2	2	Tropomyosin
SLX9	PF15341.6	gi|289583549|ref|YP_003481959.1|	-	0.0044	17.4	3.0	0.13	12.6	0.1	3.1	2	1	0	3	3	3	1	Ribosome	biogenesis	protein	SLX9
Spc7	PF08317.11	gi|289583549|ref|YP_003481959.1|	-	0.0048	15.8	13.0	0.17	10.7	4.4	2.3	2	0	0	2	2	2	2	Spc7	kinetochore	protein
Laminin_II	PF06009.12	gi|289583549|ref|YP_003481959.1|	-	0.0074	16.3	3.6	0.0074	16.3	3.6	3.6	2	2	1	3	3	3	2	Laminin	Domain	II
DUF1664	PF07889.12	gi|289583549|ref|YP_003481959.1|	-	0.0078	16.3	20.7	0.44	10.6	1.1	4.3	2	2	2	4	4	4	2	Protein	of	unknown	function	(DUF1664)
BLOC1_2	PF10046.9	gi|289583549|ref|YP_003481959.1|	-	0.01	16.1	12.9	3.6	8.0	0.3	4.4	2	2	2	4	4	4	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
RPW8	PF05659.11	gi|289583549|ref|YP_003481959.1|	-	0.016	14.9	2.9	1.2	8.8	0.2	2.9	2	2	0	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
PAS_9	PF13426.7	gi|289583549|ref|YP_003481959.1|	-	0.022	15.0	0.1	0.085	13.1	0.0	2.0	2	0	0	2	2	1	0	PAS	domain
WXG100	PF06013.12	gi|289583549|ref|YP_003481959.1|	-	0.031	14.5	16.9	0.094	13.0	0.3	5.1	3	2	2	5	5	5	0	Proteins	of	100	residues	with	WXG
CENP-F_leu_zip	PF10473.9	gi|289583549|ref|YP_003481959.1|	-	0.038	14.0	15.8	0.12	12.4	0.8	2.8	2	1	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Sec34	PF04136.15	gi|289583549|ref|YP_003481959.1|	-	0.056	13.3	13.0	8	6.3	0.1	4.4	2	2	2	4	4	4	0	Sec34-like	family
Spectrin	PF00435.21	gi|289583549|ref|YP_003481959.1|	-	0.078	13.5	12.6	0.27	11.7	1.7	3.5	2	1	2	4	4	4	0	Spectrin	repeat
APG17	PF04108.12	gi|289583549|ref|YP_003481959.1|	-	0.1	11.7	19.3	0.8	8.8	0.3	3.7	1	1	3	4	4	4	0	Autophagy	protein	Apg17
ZapB	PF06005.12	gi|289583549|ref|YP_003481959.1|	-	0.12	12.8	10.7	3.7	8.1	0.6	3.8	2	1	2	4	4	4	0	Cell	division	protein	ZapB
Atg14	PF10186.9	gi|289583549|ref|YP_003481959.1|	-	0.13	11.3	3.8	4.7	6.2	0.1	2.1	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Dimerisation	PF08100.11	gi|289583549|ref|YP_003481959.1|	-	0.18	11.9	0.1	0.75	9.9	0.0	2.1	2	0	0	2	2	1	0	Dimerisation	domain
FmiP_Thoc5	PF09766.9	gi|289583549|ref|YP_003481959.1|	-	0.19	11.0	2.6	0.79	8.9	0.1	2.4	2	1	0	2	2	2	0	Fms-interacting	protein/Thoc5
TPR_MLP1_2	PF07926.12	gi|289583549|ref|YP_003481959.1|	-	0.19	11.8	23.4	0.84	9.7	6.4	3.2	2	1	1	3	3	3	0	TPR/MLP1/MLP2-like	protein
IFT57	PF10498.9	gi|289583549|ref|YP_003481959.1|	-	0.21	10.5	15.6	1.1	8.1	4.0	3.0	1	1	0	2	2	2	0	Intra-flagellar	transport	protein	57
DUF1319	PF07028.11	gi|289583549|ref|YP_003481959.1|	-	0.23	11.7	1.3	3.5	7.9	0.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1319)
MAP65_ASE1	PF03999.12	gi|289583549|ref|YP_003481959.1|	-	0.25	10.0	3.0	0.68	8.6	3.0	1.6	1	1	0	1	1	1	0	Microtubule	associated	protein	(MAP65/ASE1	family)
CorA	PF01544.18	gi|289583549|ref|YP_003481959.1|	-	0.28	10.5	14.5	2.8	7.2	3.3	2.9	1	1	1	3	3	3	0	CorA-like	Mg2+	transporter	protein
ISG65-75	PF11727.8	gi|289583549|ref|YP_003481959.1|	-	0.34	10.1	13.2	0.15	11.2	3.2	2.4	2	0	0	2	2	2	0	Invariant	surface	glycoprotein
DUF2203	PF09969.9	gi|289583549|ref|YP_003481959.1|	-	0.35	11.6	14.1	0.6	10.8	1.7	3.4	1	1	2	3	3	3	0	Uncharacterized	conserved	protein	(DUF2203)
Laminin_I	PF06008.14	gi|289583549|ref|YP_003481959.1|	-	0.39	10.4	18.9	0.83	9.3	3.3	3.1	2	1	1	3	3	3	0	Laminin	Domain	I
Lectin_N	PF03954.14	gi|289583549|ref|YP_003481959.1|	-	0.44	10.3	8.8	0.08	12.7	1.4	2.6	3	0	0	3	3	2	0	Hepatic	lectin,	N-terminal	domain
CCDC144C	PF14915.6	gi|289583549|ref|YP_003481959.1|	-	0.47	9.5	9.8	0.74	8.9	8.8	1.7	1	1	1	2	2	2	0	CCDC144C	protein	coiled-coil	region
YabA	PF06156.13	gi|289583549|ref|YP_003481959.1|	-	0.52	11.0	8.8	1.3	9.7	0.4	3.3	3	1	1	4	4	2	0	Initiation	control	protein	YabA
Vps5	PF09325.10	gi|289583549|ref|YP_003481959.1|	-	0.55	9.7	8.9	0.44	10.1	0.5	2.4	2	0	0	2	2	2	0	Vps5	C	terminal	like
SKA2	PF16740.5	gi|289583549|ref|YP_003481959.1|	-	0.6	9.9	6.2	4	7.3	1.5	3.3	2	1	1	3	3	3	0	Spindle	and	kinetochore-associated	protein	2
MAD	PF05557.13	gi|289583549|ref|YP_003481959.1|	-	0.65	8.3	9.7	0.72	8.2	1.3	2.2	2	0	0	2	2	2	0	Mitotic	checkpoint	protein
AATF-Che1	PF13339.6	gi|289583549|ref|YP_003481959.1|	-	0.68	10.6	7.3	9.4	6.9	0.7	3.0	2	1	0	2	2	2	0	Apoptosis	antagonizing	transcription	factor
Bac_DNA_binding	PF00216.21	gi|289583549|ref|YP_003481959.1|	-	0.69	10.2	2.8	4.4	7.6	0.2	3.1	2	1	1	3	3	3	0	Bacterial	DNA-binding	protein
NPV_P10	PF05531.12	gi|289583549|ref|YP_003481959.1|	-	0.88	10.1	19.7	9.2	6.8	0.4	5.0	3	1	1	4	4	4	0	Nucleopolyhedrovirus	P10	protein
Syntaxin-6_N	PF09177.11	gi|289583549|ref|YP_003481959.1|	-	0.94	10.1	20.2	0.93	10.1	4.7	3.7	2	2	1	3	3	3	0	Syntaxin	6,	N-terminal
Prominin	PF05478.11	gi|289583549|ref|YP_003481959.1|	-	1	7.2	10.0	0.91	7.4	2.2	2.0	1	1	1	2	2	2	0	Prominin
TMPIT	PF07851.13	gi|289583549|ref|YP_003481959.1|	-	1	8.5	8.9	3.6	6.7	0.6	2.6	1	1	1	3	3	3	0	TMPIT-like	protein
ATG16	PF08614.11	gi|289583549|ref|YP_003481959.1|	-	1.1	9.5	23.2	0.65	10.2	9.7	2.4	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
DivIC	PF04977.15	gi|289583549|ref|YP_003481959.1|	-	1.3	8.9	6.1	5.8	6.7	0.1	3.5	3	1	1	4	4	3	0	Septum	formation	initiator
Filament	PF00038.21	gi|289583549|ref|YP_003481959.1|	-	1.3	8.5	21.6	1.4	8.5	4.3	3.1	1	1	1	3	3	3	0	Intermediate	filament	protein
T2SSM	PF04612.12	gi|289583549|ref|YP_003481959.1|	-	1.3	9.0	14.7	0.68	10.0	2.0	3.3	2	1	2	4	4	4	0	Type	II	secretion	system	(T2SS),	protein	M
DUF3450	PF11932.8	gi|289583549|ref|YP_003481959.1|	-	1.5	8.1	20.6	3.8	6.8	6.2	3.7	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3450)
AIP3	PF03915.13	gi|289583549|ref|YP_003481959.1|	-	1.5	7.8	14.6	0.75	8.8	4.0	2.1	1	1	1	2	2	2	0	Actin	interacting	protein	3
Allexi_40kDa	PF05549.11	gi|289583549|ref|YP_003481959.1|	-	1.5	8.3	9.1	6.3	6.2	1.9	2.7	2	1	1	3	3	3	0	Allexivirus	40kDa	protein
Seryl_tRNA_N	PF02403.22	gi|289583549|ref|YP_003481959.1|	-	1.9	8.8	13.7	6.5	7.0	2.1	3.8	2	2	2	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
TBCC_N	PF16752.5	gi|289583549|ref|YP_003481959.1|	-	2	8.9	11.3	3.2	8.2	0.1	3.6	2	2	1	4	4	4	0	Tubulin-specific	chaperone	C	N-terminal	domain
DHR10	PF18595.1	gi|289583549|ref|YP_003481959.1|	-	2.2	8.3	25.2	2.6	8.1	7.9	3.1	2	2	0	2	2	2	0	Designed	helical	repeat	protein	10	domain
DivIVA	PF05103.13	gi|289583549|ref|YP_003481959.1|	-	2.3	8.3	19.3	3.4	7.8	4.9	3.0	2	1	0	2	2	2	0	DivIVA	protein
FH2	PF02181.23	gi|289583549|ref|YP_003481959.1|	-	2.4	7.2	8.7	6.3	5.8	0.7	2.6	2	1	1	3	3	3	0	Formin	Homology	2	Domain
CENP-H	PF05837.12	gi|289583549|ref|YP_003481959.1|	-	2.9	8.3	18.1	3.2	8.2	3.6	3.2	2	1	1	3	3	3	0	Centromere	protein	H	(CENP-H)
GvpL_GvpF	PF06386.11	gi|289583549|ref|YP_003481959.1|	-	3	7.7	15.9	0.093	12.6	2.7	2.4	2	0	0	2	2	2	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
Snapin_Pallidin	PF14712.6	gi|289583549|ref|YP_003481959.1|	-	3.7	8.0	7.4	3.8	8.0	1.6	3.4	2	2	0	2	2	2	0	Snapin/Pallidin
UPF0242	PF06785.11	gi|289583549|ref|YP_003481959.1|	-	3.8	7.6	8.1	7.5	6.6	1.8	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
FlaC_arch	PF05377.11	gi|289583549|ref|YP_003481959.1|	-	4.4	7.8	12.3	13	6.2	0.4	4.9	3	2	1	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
COG6	PF06419.11	gi|289583549|ref|YP_003481959.1|	-	4.8	5.3	9.0	1.4	7.1	1.0	2.4	2	1	1	3	3	3	0	Conserved	oligomeric	complex	COG6
Nup54	PF13874.6	gi|289583549|ref|YP_003481959.1|	-	5.3	7.1	12.5	3.1	7.9	2.4	3.3	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
Fzo_mitofusin	PF04799.13	gi|289583549|ref|YP_003481959.1|	-	6.3	6.3	8.2	15	5.1	1.0	2.8	2	1	0	2	2	2	0	fzo-like	conserved	region
Prefoldin_2	PF01920.20	gi|289583549|ref|YP_003481959.1|	-	6.6	6.7	13.3	18	5.4	1.4	4.1	2	2	2	4	4	4	0	Prefoldin	subunit
MCU	PF04678.13	gi|289583549|ref|YP_003481959.1|	-	7.9	6.5	15.4	23	5.0	6.7	3.2	1	1	0	2	2	2	0	Mitochondrial	calcium	uniporter
DUF812	PF05667.11	gi|289583549|ref|YP_003481959.1|	-	7.9	5.2	20.3	3.4	6.4	4.5	2.7	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF812)
Transcrip_act	PF04949.13	gi|289583549|ref|YP_003481959.1|	-	8.5	6.2	9.9	16	5.3	0.8	3.1	2	2	0	2	2	2	0	Transcriptional	activator
Fez1	PF06818.15	gi|289583549|ref|YP_003481959.1|	-	9.1	6.7	16.7	33	4.8	6.6	2.5	1	1	1	2	2	2	0	Fez1
PRKG1_interact	PF15898.5	gi|289583549|ref|YP_003481959.1|	-	9.6	7.2	12.5	2.9	8.8	2.4	3.2	2	1	0	2	2	2	0	cGMP-dependent	protein	kinase	interacting	domain
Gln-synt_C	PF00120.24	gi|289583550|ref|YP_003481960.1|	-	2.9e-86	289.6	0.0	4.1e-86	289.1	0.0	1.2	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|289583550|ref|YP_003481960.1|	-	0.0017	18.0	0.0	0.005	16.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Gln-synt_N_2	PF16952.5	gi|289583550|ref|YP_003481960.1|	-	0.046	13.5	0.0	0.21	11.4	0.0	2.1	2	0	0	2	2	2	0	Glutamine	synthetase	N-terminal	domain
Pyridox_ox_2	PF12900.7	gi|289583551|ref|YP_003481961.1|	-	2.4e-27	95.6	0.0	2.8e-27	95.4	0.0	1.0	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
FMN_bind_2	PF04299.12	gi|289583551|ref|YP_003481961.1|	-	0.00012	21.8	0.0	0.00019	21.2	0.0	1.2	1	0	0	1	1	1	1	Putative	FMN-binding	domain
Putative_PNPOx	PF01243.20	gi|289583551|ref|YP_003481961.1|	-	0.058	13.6	0.0	0.088	13.0	0.0	1.4	1	1	0	1	1	1	0	Pyridoxamine	5'-phosphate	oxidase
Aminotran_3	PF00202.21	gi|289583552|ref|YP_003481962.1|	-	3.2e-63	213.8	0.0	3.9e-63	213.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|289583552|ref|YP_003481962.1|	-	0.026	13.7	0.0	0.036	13.2	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
Hist_deacetyl	PF00850.19	gi|289583553|ref|YP_003481963.1|	-	3.7e-73	246.7	0.2	5.5e-73	246.1	0.2	1.2	1	0	0	1	1	1	1	Histone	deacetylase	domain
SBP_bac_8	PF13416.6	gi|289583554|ref|YP_003481964.1|	-	2.5e-25	89.9	0.2	3.4e-25	89.4	0.2	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|289583554|ref|YP_003481964.1|	-	3.5e-16	59.4	0.0	5.1e-16	58.8	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
TAT_signal	PF10518.9	gi|289583554|ref|YP_003481964.1|	-	3.6e-05	23.4	4.8	5.6e-05	22.8	4.8	1.3	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
SBP_bac_1	PF01547.25	gi|289583554|ref|YP_003481964.1|	-	0.0013	18.8	0.1	2.5	8.0	0.2	2.9	3	0	0	3	3	3	2	Bacterial	extracellular	solute-binding	protein
ABC_tran	PF00005.27	gi|289583555|ref|YP_003481965.1|	-	3.5e-36	124.7	0.0	9.1e-36	123.4	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
TOBE_2	PF08402.10	gi|289583555|ref|YP_003481965.1|	-	5.3e-15	55.4	0.0	1.2e-14	54.3	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|289583555|ref|YP_003481965.1|	-	2.3e-08	34.2	1.7	0.00019	21.3	0.2	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289583555|ref|YP_003481965.1|	-	5.1e-06	26.1	0.8	0.12	11.8	0.1	3.0	3	0	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|289583555|ref|YP_003481965.1|	-	0.0004	20.1	0.0	0.0008	19.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|289583555|ref|YP_003481965.1|	-	0.0018	18.8	0.1	0.0039	17.7	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|289583555|ref|YP_003481965.1|	-	0.011	16.0	0.4	0.036	14.3	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289583555|ref|YP_003481965.1|	-	0.011	16.1	0.1	0.02	15.3	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|289583555|ref|YP_003481965.1|	-	0.012	15.6	0.0	0.028	14.3	0.0	1.6	1	0	0	1	1	1	0	RsgA	GTPase
AAA_25	PF13481.6	gi|289583555|ref|YP_003481965.1|	-	0.055	13.0	0.0	3.1	7.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Cytidylate_kin	PF02224.18	gi|289583555|ref|YP_003481965.1|	-	0.08	12.7	0.1	0.15	11.8	0.1	1.4	1	0	0	1	1	1	0	Cytidylate	kinase
NB-ARC	PF00931.22	gi|289583555|ref|YP_003481965.1|	-	0.12	11.5	0.1	0.72	9.0	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
BPD_transp_1	PF00528.22	gi|289583556|ref|YP_003481966.1|	-	1.2e-10	41.4	23.2	1.2e-10	41.4	23.2	2.5	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|289583557|ref|YP_003481967.1|	-	2e-16	60.3	18.7	2e-16	60.3	18.7	2.3	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Peptidase_M20	PF01546.28	gi|289583558|ref|YP_003481968.1|	-	2.4e-34	118.9	1.0	3.4e-34	118.4	1.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583558|ref|YP_003481968.1|	-	1.3e-11	44.4	0.0	2.8e-11	43.3	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Amidase	PF01425.21	gi|289583559|ref|YP_003481969.1|	-	1.1e-107	360.8	0.0	1.6e-107	360.3	0.0	1.2	1	0	0	1	1	1	1	Amidase
AFOR_C	PF01314.18	gi|289583560|ref|YP_003481970.1|	-	1.6e-117	392.7	0.1	2.2e-117	392.3	0.1	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289583560|ref|YP_003481970.1|	-	5.5e-68	228.7	0.1	7.7e-68	228.3	0.1	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DAO	PF01266.24	gi|289583561|ref|YP_003481971.1|	-	1.1e-47	163.3	1.6	1.3e-47	163.1	1.6	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583561|ref|YP_003481971.1|	-	1.1e-12	47.7	0.2	1.6e-12	47.3	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Amino_oxidase	PF01593.24	gi|289583561|ref|YP_003481971.1|	-	9.3e-09	35.1	0.4	2.1e-07	30.6	0.0	2.1	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
HI0933_like	PF03486.14	gi|289583561|ref|YP_003481971.1|	-	4.7e-08	32.1	4.5	0.0013	17.5	1.7	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_2	PF07992.14	gi|289583561|ref|YP_003481971.1|	-	1.1e-07	31.5	3.1	0.0027	17.0	0.1	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583561|ref|YP_003481971.1|	-	2.7e-07	30.2	4.9	0.004	16.4	0.1	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|289583561|ref|YP_003481971.1|	-	0.00025	20.4	1.7	0.074	12.3	0.5	2.1	2	0	0	2	2	2	2	FAD	binding	domain
Pyr_redox	PF00070.27	gi|289583561|ref|YP_003481971.1|	-	0.00033	21.1	0.9	0.084	13.4	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|289583561|ref|YP_003481971.1|	-	0.002	17.0	5.0	0.028	13.3	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|289583561|ref|YP_003481971.1|	-	0.0026	16.9	0.9	0.19	10.7	0.1	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|289583561|ref|YP_003481971.1|	-	0.0065	15.7	2.1	0.0065	15.7	2.1	2.0	2	0	0	2	2	2	1	Thi4	family
GMC_oxred_N	PF00732.19	gi|289583561|ref|YP_003481971.1|	-	0.0087	15.5	0.4	0.033	13.6	0.0	1.9	2	0	0	2	2	2	1	GMC	oxidoreductase
NAD_binding_8	PF13450.6	gi|289583561|ref|YP_003481971.1|	-	0.0098	16.1	5.6	0.044	14.0	5.6	2.0	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|289583561|ref|YP_003481971.1|	-	0.012	14.7	0.6	2	7.4	0.0	2.2	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.6	gi|289583561|ref|YP_003481971.1|	-	0.069	13.1	3.5	5.2	7.0	0.5	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
FAD_oxidored	PF12831.7	gi|289583561|ref|YP_003481971.1|	-	0.27	10.5	3.9	2.1	7.6	3.9	2.0	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
Arginase	PF00491.21	gi|289583562|ref|YP_003481972.1|	-	2.5e-68	230.6	0.3	3e-68	230.3	0.3	1.0	1	0	0	1	1	1	1	Arginase	family
Coat_X	PF07552.11	gi|289583562|ref|YP_003481972.1|	-	0.16	11.8	0.3	0.16	11.8	0.3	1.7	2	0	0	2	2	2	0	Spore	Coat	Protein	X	and	V	domain
Peptidase_M20	PF01546.28	gi|289583563|ref|YP_003481973.1|	-	1.7e-16	60.5	0.0	4.9e-16	59.1	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583563|ref|YP_003481973.1|	-	5e-08	32.8	0.0	1.4e-07	31.4	0.0	1.7	1	1	0	1	1	1	1	Peptidase	dimerisation	domain
BPD_transp_1	PF00528.22	gi|289583564|ref|YP_003481974.1|	-	2.5e-16	59.9	24.9	2.5e-16	59.9	24.9	2.6	1	1	1	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2534	PF10749.9	gi|289583564|ref|YP_003481974.1|	-	0.0081	16.3	0.3	0.0081	16.3	0.3	4.1	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF2534)
BPD_transp_1	PF00528.22	gi|289583565|ref|YP_003481975.1|	-	8.3e-20	71.3	19.1	8.3e-20	71.3	19.1	1.8	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
FeoB_C	PF07664.12	gi|289583565|ref|YP_003481975.1|	-	0.0038	16.9	0.7	0.0038	16.9	0.7	2.9	4	0	0	4	4	4	1	Ferrous	iron	transport	protein	B	C	terminus
SBP_bac_1	PF01547.25	gi|289583566|ref|YP_003481976.1|	-	2.1e-23	83.7	0.0	2.9e-23	83.3	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.6	gi|289583566|ref|YP_003481976.1|	-	4.9e-14	52.8	0.0	7.2e-14	52.3	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
TAT_signal	PF10518.9	gi|289583566|ref|YP_003481976.1|	-	0.57	10.1	2.5	1.1	9.2	2.5	1.5	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
TrmB	PF01978.19	gi|289583568|ref|YP_003481978.1|	-	3.3e-24	84.5	0.1	8.1e-24	83.3	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.20	gi|289583568|ref|YP_003481978.1|	-	0.00033	20.9	0.0	0.037	14.4	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
Chromo_2	PF18704.1	gi|289583568|ref|YP_003481978.1|	-	0.049	13.9	0.0	5.2	7.4	0.0	2.5	2	0	0	2	2	2	0	Chromatin	organization	modifier	domain	2
DUF4219	PF13961.6	gi|289583568|ref|YP_003481978.1|	-	0.053	13.2	0.0	0.84	9.4	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4219)
PadR	PF03551.14	gi|289583568|ref|YP_003481978.1|	-	0.096	12.7	0.1	0.34	10.9	0.0	2.0	3	0	0	3	3	3	0	Transcriptional	regulator	PadR-like	family
CN_hydrolase	PF00795.22	gi|289583569|ref|YP_003481979.1|	-	3.4e-65	220.0	0.0	3.8e-65	219.8	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
RraA-like	PF03737.15	gi|289583570|ref|YP_003481980.1|	-	2.4e-35	121.9	0.3	3e-35	121.6	0.3	1.1	1	0	0	1	1	1	1	Aldolase/RraA
TPR_1	PF00515.28	gi|289583570|ref|YP_003481980.1|	-	0.1	12.5	0.2	0.26	11.2	0.0	1.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ABC_tran	PF00005.27	gi|289583571|ref|YP_003481981.1|	-	1.7e-33	116.0	0.0	3.7e-33	114.9	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
OB_MalK	PF17912.1	gi|289583571|ref|YP_003481981.1|	-	1.3e-09	38.7	0.0	7.4e-09	36.3	0.0	2.4	2	0	0	2	2	1	1	MalK	OB	fold	domain
TOBE_2	PF08402.10	gi|289583571|ref|YP_003481981.1|	-	3.1e-09	36.9	0.1	8.3e-09	35.5	0.1	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|289583571|ref|YP_003481981.1|	-	1.4e-05	25.1	0.7	0.078	12.8	0.0	2.3	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289583571|ref|YP_003481981.1|	-	0.00027	20.4	1.1	0.0053	16.2	1.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|289583571|ref|YP_003481981.1|	-	0.0013	19.0	1.8	0.0064	16.8	1.0	2.5	1	1	0	2	2	2	1	AAA	domain
CysA_C_terminal	PF17850.1	gi|289583571|ref|YP_003481981.1|	-	0.0049	17.4	0.1	0.043	14.4	0.1	2.6	2	0	0	2	2	2	1	CysA	C-terminal	regulatory	domain
AAA_16	PF13191.6	gi|289583571|ref|YP_003481981.1|	-	0.0065	16.9	0.3	0.014	15.7	0.3	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|289583571|ref|YP_003481981.1|	-	0.0078	16.1	0.0	0.012	15.6	0.0	1.3	1	0	0	1	1	1	1	Rad17	P-loop	domain
AAA_23	PF13476.6	gi|289583571|ref|YP_003481981.1|	-	0.023	15.2	0.3	0.18	12.3	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ATPase_2	PF01637.18	gi|289583571|ref|YP_003481981.1|	-	0.029	14.3	0.0	0.052	13.5	0.0	1.6	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA	PF00004.29	gi|289583571|ref|YP_003481981.1|	-	0.034	14.6	0.3	0.078	13.4	0.1	1.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TOBE	PF03459.17	gi|289583571|ref|YP_003481981.1|	-	0.053	13.8	0.4	0.15	12.4	0.1	2.0	2	0	0	2	2	2	0	TOBE	domain
AAA_25	PF13481.6	gi|289583571|ref|YP_003481981.1|	-	0.096	12.3	0.0	0.48	10.0	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
PRK	PF00485.18	gi|289583571|ref|YP_003481981.1|	-	0.1	12.3	0.2	0.24	11.1	0.2	1.6	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_28	PF13521.6	gi|289583571|ref|YP_003481981.1|	-	0.11	12.7	0.5	0.41	10.9	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
Reovirus_cap	PF00979.17	gi|289583571|ref|YP_003481981.1|	-	0.15	11.2	0.0	3.9	6.6	0.0	2.0	2	0	0	2	2	2	0	Reovirus	outer	capsid	protein,	Sigma	3
Acyl-CoA_dh_1	PF00441.24	gi|289583572|ref|YP_003481982.1|	-	5.8e-37	127.2	0.8	8.9e-37	126.6	0.8	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|289583572|ref|YP_003481982.1|	-	1.6e-20	73.1	0.0	3e-20	72.2	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.16	gi|289583572|ref|YP_003481982.1|	-	1e-12	48.7	0.4	2.9e-12	47.2	0.4	1.8	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.11	gi|289583572|ref|YP_003481982.1|	-	8.6e-08	32.5	0.3	1.7e-07	31.6	0.3	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
HpaB_N	PF11794.8	gi|289583572|ref|YP_003481982.1|	-	0.14	11.8	0.2	2.1	8.0	0.2	2.1	1	1	0	1	1	1	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
LrgB	PF04172.16	gi|289583572|ref|YP_003481982.1|	-	0.27	10.7	0.2	0.44	10.0	0.2	1.2	1	0	0	1	1	1	0	LrgB-like	family
CoA_transf_3	PF02515.17	gi|289583573|ref|YP_003481983.1|	-	2.2e-88	296.9	0.2	3.8e-87	292.8	0.2	2.0	1	1	0	1	1	1	1	CoA-transferase	family	III
TetR_C_1	PF02909.17	gi|289583574|ref|YP_003481984.1|	-	0.045	13.6	0.0	0.05	13.4	0.0	1.1	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
Macoilin	PF09726.9	gi|289583575|ref|YP_003481985.1|	-	0.035	12.7	4.4	0.031	12.9	4.4	1.1	1	0	0	1	1	1	0	Macoilin	family
SPX	PF03105.19	gi|289583575|ref|YP_003481985.1|	-	0.15	12.0	12.9	0.19	11.6	12.9	1.1	1	0	0	1	1	1	0	SPX	domain
Apt1	PF10351.9	gi|289583575|ref|YP_003481985.1|	-	0.22	10.3	7.7	0.22	10.3	7.7	1.1	1	0	0	1	1	1	0	Golgi-body	localisation	protein	domain
SOG2	PF10428.9	gi|289583575|ref|YP_003481985.1|	-	0.72	9.0	10.3	0.82	8.8	10.3	1.1	1	0	0	1	1	1	0	RAM	signalling	pathway	protein
Peptidase_S64	PF08192.11	gi|289583575|ref|YP_003481985.1|	-	1.4	7.4	8.0	1.7	7.1	8.0	1.1	1	0	0	1	1	1	0	Peptidase	family	S64
Presenilin	PF01080.17	gi|289583575|ref|YP_003481985.1|	-	1.5	7.5	10.3	1.9	7.1	10.3	1.3	1	0	0	1	1	1	0	Presenilin
Ndc1_Nup	PF09531.10	gi|289583575|ref|YP_003481985.1|	-	4.3	5.9	4.5	4.4	5.9	4.5	1.1	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
AAA_31	PF13614.6	gi|289583576|ref|YP_003481986.1|	-	6.9e-20	71.7	0.0	9.6e-20	71.2	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|289583576|ref|YP_003481986.1|	-	4e-10	39.8	0.0	5.4e-10	39.4	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.11	gi|289583576|ref|YP_003481986.1|	-	3e-05	23.4	0.4	0.018	14.3	0.1	2.2	1	1	0	2	2	2	2	ATPase	MipZ
CBP_BcsQ	PF06564.12	gi|289583576|ref|YP_003481986.1|	-	3e-05	23.6	0.1	6.5e-05	22.5	0.1	1.5	1	1	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
ArsA_ATPase	PF02374.15	gi|289583576|ref|YP_003481986.1|	-	0.00027	20.2	0.0	0.00046	19.5	0.0	1.5	1	0	0	1	1	1	1	Anion-transporting	ATPase
ParA	PF10609.9	gi|289583576|ref|YP_003481986.1|	-	0.00078	19.0	0.1	0.0044	16.5	0.0	1.9	2	0	0	2	2	2	1	NUBPL	iron-transfer	P-loop	NTPase
AAA_22	PF13401.6	gi|289583576|ref|YP_003481986.1|	-	0.0051	17.1	0.2	0.86	9.9	0.2	3.1	2	2	0	2	2	2	1	AAA	domain
ATP_bind_1	PF03029.17	gi|289583576|ref|YP_003481986.1|	-	0.15	11.8	0.0	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
MatE	PF01554.18	gi|289583579|ref|YP_003481989.1|	-	4.7e-50	169.4	30.1	5e-29	101.0	9.3	2.9	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|289583579|ref|YP_003481989.1|	-	1.2e-08	35.1	7.5	1.2e-08	35.1	7.5	4.3	4	1	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|289583579|ref|YP_003481989.1|	-	0.00015	20.5	14.6	0.0044	15.7	5.1	2.9	2	1	1	3	3	3	3	Lipid	II	flippase	MurJ
DUF3717	PF12512.8	gi|289583579|ref|YP_003481989.1|	-	2.3	8.1	4.9	0.91	9.5	0.4	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3717)
zinc_ribbon_2	PF13240.6	gi|289583580|ref|YP_003481990.1|	-	2.5e-05	23.8	0.2	3.4e-05	23.4	0.2	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289583580|ref|YP_003481990.1|	-	0.00088	20.0	0.3	0.0012	19.5	0.3	1.2	1	0	0	1	1	1	1	zinc-ribbon	family
DZR	PF12773.7	gi|289583580|ref|YP_003481990.1|	-	0.0013	18.7	1.2	0.0019	18.1	1.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
PLATZ	PF04640.14	gi|289583580|ref|YP_003481990.1|	-	0.027	15.1	0.5	0.048	14.3	0.5	1.3	1	0	0	1	1	1	0	PLATZ	transcription	factor
Prok-RING_1	PF14446.6	gi|289583580|ref|YP_003481990.1|	-	0.03	14.2	0.6	0.047	13.6	0.6	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DUF4231	PF14015.6	gi|289583580|ref|YP_003481990.1|	-	0.046	14.2	0.4	0.26	11.8	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Vps39_2	PF10367.9	gi|289583580|ref|YP_003481990.1|	-	0.06	13.8	0.0	0.088	13.3	0.0	1.3	1	0	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
MerC	PF03203.14	gi|289583580|ref|YP_003481990.1|	-	0.23	11.9	2.4	0.67	10.4	2.4	1.8	1	1	0	1	1	1	0	MerC	mercury	resistance	protein
zf-ribbon_3	PF13248.6	gi|289583580|ref|YP_003481990.1|	-	0.48	9.9	4.0	12	5.5	5.0	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
TetR_C_6	PF13977.6	gi|289583581|ref|YP_003481991.1|	-	1.9e-10	41.0	0.6	3.4e-10	40.2	0.6	1.4	1	0	0	1	1	1	1	BetI-type	transcriptional	repressor,	C-terminal
TetR_N	PF00440.23	gi|289583581|ref|YP_003481991.1|	-	6.6e-09	35.4	0.1	1.1e-08	34.7	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
TetR_C_24	PF17932.1	gi|289583581|ref|YP_003481991.1|	-	0.0087	16.3	0.1	0.04	14.2	0.0	2.0	2	0	0	2	2	2	1	Tetracyclin	repressor-like,	C-terminal	domain
TetR_C_5	PF08360.11	gi|289583581|ref|YP_003481991.1|	-	0.023	14.9	0.0	0.04	14.1	0.0	1.4	1	0	0	1	1	1	0	QacR-like	protein,	C-terminal	region
TetR_C_27	PF17935.1	gi|289583581|ref|YP_003481991.1|	-	0.071	13.2	0.1	0.34	11.0	0.0	2.2	2	0	0	2	2	2	0	Tetracyclin	repressor-like,	C-terminal	domain
DUF502	PF04367.13	gi|289583582|ref|YP_003481992.1|	-	9.2e-17	60.9	0.8	1.1e-16	60.6	0.0	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF502)
MFS_1	PF07690.16	gi|289583584|ref|YP_003481994.1|	-	1.5e-35	122.8	93.5	1.8e-26	92.9	57.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_4	PF06779.14	gi|289583584|ref|YP_003481994.1|	-	1.9e-07	30.7	35.9	2.8e-07	30.2	35.9	1.2	1	0	0	1	1	1	1	Uncharacterised	MFS-type	transporter	YbfB
SNF	PF00209.18	gi|289583586|ref|YP_003481996.1|	-	3.9e-48	164.4	30.4	8.6e-28	97.3	6.3	2.1	2	0	0	2	2	2	2	Sodium:neurotransmitter	symporter	family
E1_dh	PF00676.20	gi|289583587|ref|YP_003481997.1|	-	2.9e-78	262.8	0.0	3.7e-78	262.5	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.6	gi|289583587|ref|YP_003481997.1|	-	5.4e-06	25.8	0.0	8.6e-06	25.2	0.0	1.3	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Transketolase_N	PF00456.21	gi|289583587|ref|YP_003481997.1|	-	0.00033	19.7	0.1	0.00049	19.2	0.1	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
TPP_enzyme_C	PF02775.21	gi|289583587|ref|YP_003481997.1|	-	0.00077	19.3	0.1	0.0041	16.9	0.1	2.1	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PEP-utilisers_N	PF05524.13	gi|289583587|ref|YP_003481997.1|	-	0.021	15.0	0.3	0.061	13.5	0.3	1.9	1	0	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
Transket_pyr	PF02779.24	gi|289583588|ref|YP_003481998.1|	-	6.1e-51	172.6	0.2	8.7e-51	172.1	0.2	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|289583588|ref|YP_003481998.1|	-	5e-37	126.5	0.8	2e-36	124.6	0.2	2.0	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
SMI1_KNR4	PF09346.10	gi|289583591|ref|YP_003482001.1|	-	0.043	14.2	0.0	0.069	13.5	0.0	1.4	1	0	0	1	1	1	0	SMI1	/	KNR4	family	(SUKH-1)
RcnB	PF11776.8	gi|289583591|ref|YP_003482001.1|	-	0.051	13.6	0.2	0.2	11.7	0.0	2.1	2	0	0	2	2	2	0	Nickel/cobalt	transporter	regulator
Bac_luciferase	PF00296.20	gi|289583593|ref|YP_003482003.1|	-	1.5e-56	192.1	2.0	1.8e-56	191.9	2.0	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Peptidase_M24	PF00557.24	gi|289583594|ref|YP_003482004.1|	-	1.1e-28	100.4	0.0	1.9e-28	99.6	0.0	1.4	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|289583594|ref|YP_003482004.1|	-	2.1e-06	28.4	0.1	6.6e-06	26.8	0.1	2.0	1	1	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
MFS_1	PF07690.16	gi|289583595|ref|YP_003482005.1|	-	9.5e-44	149.8	73.6	1.3e-35	123.0	46.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289583595|ref|YP_003482005.1|	-	3.1e-07	29.6	13.9	3.1e-07	29.6	13.9	2.1	2	0	0	2	2	2	2	MFS_1	like	family
MFS_4	PF06779.14	gi|289583595|ref|YP_003482005.1|	-	6.6e-05	22.4	36.9	8.1e-05	22.1	36.9	1.0	1	0	0	1	1	1	1	Uncharacterised	MFS-type	transporter	YbfB
TraS	PF10624.9	gi|289583595|ref|YP_003482005.1|	-	0.035	14.0	2.4	0.33	10.9	0.3	2.7	2	0	0	2	2	2	0	Plasmid	conjugative	transfer	entry	exclusion	protein	TraS
TPP_enzyme_M	PF00205.22	gi|289583596|ref|YP_003482006.1|	-	6.4e-36	123.1	0.1	1.7e-35	121.8	0.1	1.8	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.21	gi|289583596|ref|YP_003482006.1|	-	1.7e-33	115.6	0.6	1.7e-33	115.6	0.6	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_N	PF02776.18	gi|289583596|ref|YP_003482006.1|	-	1.9e-30	105.7	1.3	2.7e-29	102.0	0.0	2.7	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.16	gi|289583596|ref|YP_003482006.1|	-	0.11	11.4	0.1	0.18	10.7	0.1	1.3	1	0	0	1	1	1	0	NAD(P)	transhydrogenase	beta	subunit
SQS_PSY	PF00494.19	gi|289583597|ref|YP_003482007.1|	-	2.8e-62	210.6	8.3	3.5e-62	210.3	8.3	1.0	1	0	0	1	1	1	1	Squalene/phytoene	synthase
BAT	PF15915.5	gi|289583598|ref|YP_003482008.1|	-	1.1e-44	152.0	8.4	1.1e-44	152.0	8.4	2.7	2	1	0	2	2	1	1	GAF	and	HTH_10	associated	domain
HTH_10	PF04967.12	gi|289583598|ref|YP_003482008.1|	-	3.6e-19	68.3	0.2	9.3e-19	67.0	0.2	1.8	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GAF_2	PF13185.6	gi|289583598|ref|YP_003482008.1|	-	5.3e-14	52.7	2.5	5.7e-14	52.6	1.0	1.9	2	0	0	2	2	2	1	GAF	domain
PAS_4	PF08448.10	gi|289583598|ref|YP_003482008.1|	-	6.6e-09	36.0	0.6	4.3e-08	33.4	0.1	2.6	2	0	0	2	2	2	1	PAS	fold
GAF_3	PF13492.6	gi|289583598|ref|YP_003482008.1|	-	8.4e-06	26.2	0.2	4.5e-05	23.8	0.1	2.4	2	1	0	2	2	2	1	GAF	domain
Sigma70_r4	PF04545.16	gi|289583598|ref|YP_003482008.1|	-	0.0011	18.4	0.9	0.0044	16.5	0.9	2.1	1	1	0	1	1	1	1	Sigma-70,	region	4
GAF	PF01590.26	gi|289583598|ref|YP_003482008.1|	-	0.0014	19.2	0.1	0.0035	18.0	0.1	1.7	1	0	0	1	1	1	1	GAF	domain
PAS	PF00989.25	gi|289583598|ref|YP_003482008.1|	-	0.0092	16.0	0.1	0.066	13.2	0.0	2.4	2	0	0	2	2	2	1	PAS	fold
UPF0122	PF04297.14	gi|289583598|ref|YP_003482008.1|	-	0.064	13.5	0.8	0.31	11.3	0.1	2.1	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
DUF134	PF02001.16	gi|289583598|ref|YP_003482008.1|	-	0.068	13.7	0.0	0.33	11.5	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF134
HTH_11	PF08279.12	gi|289583598|ref|YP_003482008.1|	-	0.077	13.0	0.0	0.2	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
Sigma70_r4_2	PF08281.12	gi|289583598|ref|YP_003482008.1|	-	0.16	11.7	1.0	1.9	8.2	1.0	2.6	1	1	0	1	1	1	0	Sigma-70,	region	4
HTH_20	PF12840.7	gi|289583599|ref|YP_003482009.1|	-	0.00017	21.6	0.3	0.00024	21.1	0.3	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|289583599|ref|YP_003482009.1|	-	0.00034	20.3	0.0	0.00063	19.5	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
FUR	PF01475.19	gi|289583599|ref|YP_003482009.1|	-	0.0013	18.8	0.0	0.0018	18.4	0.0	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_24	PF13412.6	gi|289583599|ref|YP_003482009.1|	-	0.047	13.2	0.0	0.13	11.9	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Zn-ribbon_8	PF09723.10	gi|289583600|ref|YP_003482010.1|	-	0.00021	21.3	0.1	0.00035	20.6	0.1	1.3	1	0	0	1	1	1	1	Zinc	ribbon	domain
zf_UBZ	PF18439.1	gi|289583600|ref|YP_003482010.1|	-	0.0025	17.3	0.3	0.022	14.3	0.1	2.2	2	0	0	2	2	2	1	Ubiquitin-Binding	Zinc	Finger
UPF0547	PF10571.9	gi|289583600|ref|YP_003482010.1|	-	0.016	15.3	0.4	0.016	15.3	0.4	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.7	gi|289583600|ref|YP_003482010.1|	-	0.022	14.8	2.6	0.035	14.1	2.6	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Elf1	PF05129.13	gi|289583600|ref|YP_003482010.1|	-	0.031	14.3	4.1	0.034	14.2	4.1	1.1	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Sgf11	PF08209.11	gi|289583600|ref|YP_003482010.1|	-	0.034	13.7	2.3	0.17	11.5	0.1	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-CHY	PF05495.12	gi|289583600|ref|YP_003482010.1|	-	0.042	14.3	1.7	0.044	14.3	1.7	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
zf-C3HC4_3	PF13920.6	gi|289583600|ref|YP_003482010.1|	-	0.053	13.4	2.1	0.078	12.9	1.5	1.6	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-C2H2	PF00096.26	gi|289583600|ref|YP_003482010.1|	-	0.081	13.4	0.1	4.5	7.9	0.0	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF2197	PF09963.9	gi|289583600|ref|YP_003482010.1|	-	0.092	13.0	1.2	0.38	11.1	0.2	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2197)
zf-DNA_Pol	PF08996.10	gi|289583600|ref|YP_003482010.1|	-	0.23	11.2	2.7	0.24	11.1	2.7	1.1	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
HTH_10	PF04967.12	gi|289583601|ref|YP_003482011.1|	-	2.9e-20	71.8	0.2	4.6e-20	71.2	0.2	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.16	gi|289583601|ref|YP_003482011.1|	-	0.00013	21.4	0.0	0.00022	20.7	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
GerE	PF00196.19	gi|289583601|ref|YP_003482011.1|	-	0.00027	20.4	0.3	0.0015	18.0	0.3	2.0	1	1	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
Fe_dep_repress	PF01325.19	gi|289583601|ref|YP_003482011.1|	-	0.00044	20.4	0.1	0.00081	19.5	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.20	gi|289583601|ref|YP_003482011.1|	-	0.026	14.4	0.0	0.054	13.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Sigma70_r3	PF04539.16	gi|289583601|ref|YP_003482011.1|	-	0.033	14.3	0.0	0.14	12.3	0.0	2.0	2	0	0	2	2	2	0	Sigma-70	region	3
HTH_40	PF14493.6	gi|289583601|ref|YP_003482011.1|	-	0.038	14.4	0.0	0.11	13.0	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.16	gi|289583601|ref|YP_003482011.1|	-	0.045	13.5	0.3	0.23	11.3	0.3	2.0	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_20	PF12840.7	gi|289583601|ref|YP_003482011.1|	-	0.056	13.5	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583601|ref|YP_003482011.1|	-	0.2	11.3	0.0	0.42	10.2	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Pyridox_ox_2	PF12900.7	gi|289583602|ref|YP_003482012.1|	-	3.1e-17	62.9	0.0	3.7e-17	62.6	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Putative_PNPOx	PF01243.20	gi|289583602|ref|YP_003482012.1|	-	5.6e-07	29.7	0.0	7.4e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
ALO	PF04030.14	gi|289583603|ref|YP_003482013.1|	-	1e-37	130.4	1.6	1.2e-34	120.3	0.2	2.1	2	0	0	2	2	2	2	D-arabinono-1,4-lactone	oxidase
FAD_binding_4	PF01565.23	gi|289583603|ref|YP_003482013.1|	-	3.3e-28	98.2	0.5	4.8e-28	97.6	0.5	1.2	1	0	0	1	1	1	1	FAD	binding	domain
ASRT	PF07100.11	gi|289583604|ref|YP_003482014.1|	-	8.2e-46	154.9	0.0	9.6e-46	154.7	0.0	1.0	1	0	0	1	1	1	1	Anabaena	sensory	rhodopsin	transducer
Mem_trans	PF03547.18	gi|289583605|ref|YP_003482015.1|	-	6.1e-23	80.9	19.2	1.2e-13	50.3	9.7	2.0	1	1	1	2	2	2	2	Membrane	transport	protein
CarboxypepD_reg	PF13620.6	gi|289583606|ref|YP_003482016.1|	-	1.4e-42	143.8	45.3	5e-17	61.9	1.4	8.4	8	1	0	8	8	7	3	Carboxypeptidase	regulatory-like	domain
Peptidase_S8	PF00082.22	gi|289583606|ref|YP_003482016.1|	-	8.1e-42	143.5	0.6	8.1e-42	143.5	0.6	2.1	2	0	0	2	2	2	1	Subtilase	family
CarbopepD_reg_2	PF13715.6	gi|289583606|ref|YP_003482016.1|	-	3.2e-27	94.4	8.2	2.1e-12	46.9	0.2	4.0	3	0	0	3	3	3	3	CarboxypepD_reg-like	domain
CARDB	PF07705.11	gi|289583606|ref|YP_003482016.1|	-	5.4e-25	87.6	37.7	4e-05	23.8	3.3	9.2	9	1	0	9	9	8	5	CARDB
fn3_3	PF14686.6	gi|289583606|ref|YP_003482016.1|	-	3.9e-09	36.2	9.4	0.0067	16.2	0.0	5.4	5	0	0	5	5	5	3	Polysaccharide	lyase	family	4,	domain	II
DUF2012	PF09430.10	gi|289583606|ref|YP_003482016.1|	-	1.3e-08	35.0	0.4	0.0011	19.1	0.0	3.6	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF2012)
DUF11	PF01345.18	gi|289583606|ref|YP_003482016.1|	-	5.4e-08	33.0	28.0	0.0051	17.1	0.8	8.7	7	3	1	8	8	8	2	Domain	of	unknown	function	DUF11
PEGA	PF08308.11	gi|289583606|ref|YP_003482016.1|	-	2.1e-07	30.7	5.5	0.0014	18.5	0.0	5.8	6	0	0	6	6	5	2	PEGA	domain
A2M	PF00207.22	gi|289583606|ref|YP_003482016.1|	-	8.6e-07	28.7	1.1	3.2	7.7	0.0	5.9	6	0	0	6	6	6	2	Alpha-2-macroglobulin	family
SoxY	PF13501.6	gi|289583606|ref|YP_003482016.1|	-	1.4e-06	28.5	1.5	1.5	9.0	0.0	5.4	5	0	0	5	5	5	2	Sulfur	oxidation	protein	SoxY
Dockerin_1	PF00404.18	gi|289583606|ref|YP_003482016.1|	-	2.8e-06	27.4	2.4	2.8e-06	27.4	2.4	2.9	3	0	0	3	3	1	1	Dockerin	type	I	domain
SdrD_B	PF17210.3	gi|289583606|ref|YP_003482016.1|	-	5.2e-06	26.7	27.5	5.3e-05	23.4	0.9	6.2	4	1	1	5	5	5	2	SdrD	B-like	domain
SpaA	PF17802.1	gi|289583606|ref|YP_003482016.1|	-	0.00012	22.3	1.0	0.00012	22.3	1.0	7.6	6	2	0	6	6	5	2	Prealbumin-like	fold	domain
DUF4832	PF16116.5	gi|289583606|ref|YP_003482016.1|	-	0.0005	20.0	0.1	5.2	6.9	0.0	5.5	6	0	0	6	6	6	1	Domain	of	unknown	function	(DUF4832)
CBM_4_9	PF02018.17	gi|289583606|ref|YP_003482016.1|	-	0.012	15.9	4.9	2.9	8.2	0.0	4.4	3	0	0	3	3	3	0	Carbohydrate	binding	domain
MetallophosN	PF16371.5	gi|289583606|ref|YP_003482016.1|	-	0.012	15.8	2.8	0.64	10.3	0.1	3.3	3	0	0	3	3	3	0	N	terminal	of	Calcineurin-like	phosphoesterase
TTR-52	PF01060.23	gi|289583606|ref|YP_003482016.1|	-	0.041	14.6	0.8	38	5.1	0.0	3.8	3	0	0	3	3	3	0	Transthyretin-like	family
MG2	PF01835.19	gi|289583606|ref|YP_003482016.1|	-	0.045	14.2	6.3	7.4	7.1	0.5	4.3	4	0	0	4	4	3	0	MG2	domain
Transglut_C	PF00927.22	gi|289583606|ref|YP_003482016.1|	-	0.057	13.6	0.0	40	4.4	0.0	3.9	4	0	0	4	4	3	0	Transglutaminase	family,	C-terminal	ig	like	domain
Tad	PF13400.6	gi|289583606|ref|YP_003482016.1|	-	0.15	12.4	6.4	0.36	11.2	6.4	1.6	1	0	0	1	1	1	0	Putative	Flp	pilus-assembly	TadE/G-like
Fn3-like	PF14310.6	gi|289583606|ref|YP_003482016.1|	-	0.2	11.8	9.6	49	4.1	0.0	6.9	7	0	0	7	7	6	0	Fibronectin	type	III-like	domain
Big_7	PF17957.1	gi|289583606|ref|YP_003482016.1|	-	2.5	8.9	45.9	1.7	9.5	0.0	9.1	8	1	1	9	9	9	0	Bacterial	Ig	domain
He_PIG	PF05345.12	gi|289583606|ref|YP_003482016.1|	-	3.1	8.1	8.7	6.8	7.0	0.3	5.3	3	1	0	3	3	3	0	Putative	Ig	domain
AphA_like	PF14557.6	gi|289583607|ref|YP_003482017.1|	-	6.1e-08	32.6	0.1	7.2e-08	32.4	0.1	1.1	1	0	0	1	1	1	1	Putative	AphA-like	transcriptional	regulator
PadR	PF03551.14	gi|289583607|ref|YP_003482017.1|	-	1.9e-05	24.5	0.0	3.1e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Vir_act_alpha_C	PF10400.9	gi|289583607|ref|YP_003482017.1|	-	0.00019	22.1	1.5	0.00034	21.2	0.8	1.8	2	0	0	2	2	2	1	Virulence	activator	alpha	C-term
HTH_34	PF13601.6	gi|289583607|ref|YP_003482017.1|	-	0.056	13.6	0.0	0.3	11.3	0.0	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
DEDD_Tnp_IS110	PF01548.17	gi|289583607|ref|YP_003482017.1|	-	0.11	12.3	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	Transposase
Penicillinase_R	PF03965.16	gi|289583607|ref|YP_003482017.1|	-	0.13	12.6	0.0	0.17	12.2	0.0	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
Cyclase	PF04199.13	gi|289583608|ref|YP_003482018.1|	-	2.5e-36	124.9	0.1	5.6e-36	123.8	0.0	1.5	2	0	0	2	2	2	1	Putative	cyclase
Acyl-CoA_dh_1	PF00441.24	gi|289583609|ref|YP_003482019.1|	-	1.4e-47	161.6	5.7	2.1e-47	161.1	5.7	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|289583609|ref|YP_003482019.1|	-	8.5e-25	87.6	0.7	1.7e-24	86.6	0.1	1.9	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.11	gi|289583609|ref|YP_003482019.1|	-	7e-22	78.1	7.7	1.1e-21	77.5	7.7	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|289583609|ref|YP_003482019.1|	-	7.6e-20	70.9	0.0	1.9e-19	69.6	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
AMP-binding	PF00501.28	gi|289583610|ref|YP_003482020.1|	-	2.6e-102	342.6	0.0	3.1e-102	342.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|289583610|ref|YP_003482020.1|	-	3e-18	66.6	0.0	1.5e-17	64.3	0.0	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
TrmB	PF01978.19	gi|289583611|ref|YP_003482021.1|	-	6.6e-06	25.9	0.0	3.1e-05	23.8	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|289583611|ref|YP_003482021.1|	-	3.6e-05	23.7	0.1	9.2e-05	22.4	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|289583611|ref|YP_003482021.1|	-	0.0027	17.6	0.0	0.0046	16.9	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_5	PF01022.20	gi|289583611|ref|YP_003482021.1|	-	0.0079	16.0	0.0	0.024	14.5	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_IclR	PF09339.10	gi|289583611|ref|YP_003482021.1|	-	0.018	14.8	0.1	0.04	13.7	0.1	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MbeD_MobD	PF04899.12	gi|289583611|ref|YP_003482021.1|	-	0.023	14.8	0.3	0.045	13.9	0.3	1.4	1	0	0	1	1	1	0	MbeD/MobD	like
HTH_DeoR	PF08220.12	gi|289583611|ref|YP_003482021.1|	-	0.051	13.3	0.0	0.12	12.1	0.0	1.7	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
TMF_DNA_bd	PF12329.8	gi|289583611|ref|YP_003482021.1|	-	0.053	13.5	0.0	0.079	13.0	0.0	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
HTH_39	PF14090.6	gi|289583611|ref|YP_003482021.1|	-	0.057	13.2	0.2	0.92	9.3	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
SlyX	PF04102.12	gi|289583611|ref|YP_003482021.1|	-	0.084	13.5	0.7	0.66	10.6	0.3	2.3	1	1	1	2	2	2	0	SlyX
PilW	PF16074.5	gi|289583611|ref|YP_003482021.1|	-	0.1	12.6	1.0	0.91	9.5	0.3	2.0	1	1	1	2	2	2	0	Type	IV	Pilus-assembly	protein	W
DivIC	PF04977.15	gi|289583611|ref|YP_003482021.1|	-	0.32	10.8	2.4	0.54	10.1	0.2	2.1	2	0	0	2	2	2	0	Septum	formation	initiator
Toxin_10	PF05431.11	gi|289583612|ref|YP_003482022.1|	-	0.095	12.2	0.1	0.12	11.8	0.1	1.3	1	0	0	1	1	1	0	Insecticidal	Crystal	Toxin,	P42
3HCDH_N	PF02737.18	gi|289583613|ref|YP_003482023.1|	-	3.4e-47	160.7	0.0	4.4e-47	160.3	0.0	1.1	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.22	gi|289583613|ref|YP_003482023.1|	-	1.5e-15	57.6	0.0	2.6e-15	56.8	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
F420_oxidored	PF03807.17	gi|289583613|ref|YP_003482023.1|	-	2.1e-05	25.0	0.1	0.00013	22.5	0.2	2.3	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|289583613|ref|YP_003482023.1|	-	6.8e-05	23.1	0.1	0.00019	21.7	0.1	1.7	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|289583613|ref|YP_003482023.1|	-	0.00029	20.8	0.0	0.00045	20.2	0.0	1.3	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.16	gi|289583613|ref|YP_003482023.1|	-	0.0015	18.2	0.0	0.0023	17.6	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.14	gi|289583613|ref|YP_003482023.1|	-	0.0033	17.0	0.0	0.0052	16.4	0.0	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|289583613|ref|YP_003482023.1|	-	0.017	15.2	0.0	0.038	14.1	0.0	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.6	gi|289583613|ref|YP_003482023.1|	-	0.028	14.8	0.1	0.051	14.0	0.1	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
TrkA_N	PF02254.18	gi|289583613|ref|YP_003482023.1|	-	0.035	14.3	0.7	0.18	12.1	0.7	2.2	1	1	0	1	1	1	0	TrkA-N	domain
Glyco_hydro_4	PF02056.16	gi|289583613|ref|YP_003482023.1|	-	0.066	12.8	0.2	0.15	11.6	0.2	1.6	1	1	0	1	1	1	0	Family	4	glycosyl	hydrolase
IlvN	PF07991.12	gi|289583613|ref|YP_003482023.1|	-	0.14	11.7	0.1	0.29	10.7	0.1	1.6	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
adh_short_C2	PF13561.6	gi|289583614|ref|YP_003482024.1|	-	3.6e-60	203.4	1.2	4.1e-60	203.2	1.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|289583614|ref|YP_003482024.1|	-	2e-49	167.7	0.1	2.4e-49	167.5	0.1	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|289583614|ref|YP_003482024.1|	-	1.8e-11	44.3	0.1	2.7e-11	43.7	0.1	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|289583614|ref|YP_003482024.1|	-	1.2e-05	24.9	1.0	2.5e-05	23.9	0.5	1.7	1	1	1	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
3HCDH_N	PF02737.18	gi|289583614|ref|YP_003482024.1|	-	0.0038	17.1	0.0	0.007	16.3	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GDP_Man_Dehyd	PF16363.5	gi|289583614|ref|YP_003482024.1|	-	0.013	14.9	0.1	0.02	14.3	0.1	1.4	1	0	0	1	1	1	0	GDP-mannose	4,6	dehydratase
CoA_trans	PF01144.23	gi|289583615|ref|YP_003482025.1|	-	4.3e-29	101.5	0.0	5.1e-29	101.2	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.23	gi|289583616|ref|YP_003482026.1|	-	6.9e-21	74.6	0.0	8.7e-21	74.3	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
Mal_decarbox_Al	PF16957.5	gi|289583616|ref|YP_003482026.1|	-	0.17	10.2	0.1	0.37	9.1	0.1	1.5	2	0	0	2	2	2	0	Malonate	decarboxylase,	alpha	subunit,	transporter
HpcH_HpaI	PF03328.14	gi|289583617|ref|YP_003482027.1|	-	1.7e-42	145.1	2.3	2e-42	144.8	2.3	1.1	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF442	PF04273.13	gi|289583617|ref|YP_003482027.1|	-	0.18	11.9	1.2	0.7	10.0	0.3	2.3	3	0	0	3	3	3	0	Putative	phosphatase	(DUF442)
MR_MLE_C	PF13378.6	gi|289583618|ref|YP_003482028.1|	-	1e-43	149.5	0.3	1.3e-43	149.1	0.3	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|289583618|ref|YP_003482028.1|	-	6.9e-11	42.4	0.0	1.1e-10	41.7	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|289583619|ref|YP_003482029.1|	-	1.1e-54	185.4	0.1	1.4e-54	185.0	0.1	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|289583619|ref|YP_003482029.1|	-	2.9e-15	56.5	0.0	5.5e-15	55.6	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Acetyltransf_1	PF00583.25	gi|289583620|ref|YP_003482030.1|	-	6.8e-14	52.1	0.3	8.6e-14	51.8	0.3	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289583620|ref|YP_003482030.1|	-	4e-09	36.8	0.1	5.6e-09	36.3	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|289583620|ref|YP_003482030.1|	-	1.3e-07	31.6	0.1	1.8e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|289583620|ref|YP_003482030.1|	-	0.0063	16.7	0.0	0.0077	16.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.7	gi|289583620|ref|YP_003482030.1|	-	0.017	15.2	1.4	0.025	14.8	1.4	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|289583620|ref|YP_003482030.1|	-	0.033	14.3	0.0	0.047	13.8	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|289583620|ref|YP_003482030.1|	-	0.035	14.1	0.0	0.062	13.3	0.0	1.3	1	0	0	1	1	1	0	FR47-like	protein
MFS_1	PF07690.16	gi|289583621|ref|YP_003482031.1|	-	1.8e-31	109.4	54.9	4.6e-21	75.1	24.6	2.0	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
DUF1478	PF07349.11	gi|289583621|ref|YP_003482031.1|	-	0.026	14.4	1.8	0.061	13.2	1.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1478)
MFS_1_like	PF12832.7	gi|289583621|ref|YP_003482031.1|	-	8.2	5.2	26.5	0.029	13.2	11.9	2.4	2	1	1	3	3	3	0	MFS_1	like	family
DAO	PF01266.24	gi|289583622|ref|YP_003482032.1|	-	1.3e-62	212.5	1.7	1.4e-62	212.3	1.7	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|289583622|ref|YP_003482032.1|	-	7.6e-11	41.8	0.0	0.00021	20.6	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|289583622|ref|YP_003482032.1|	-	7.7e-09	35.1	2.2	1e-08	34.7	2.2	1.1	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|289583622|ref|YP_003482032.1|	-	7.9e-06	24.8	0.1	0.055	12.2	0.0	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox	PF00070.27	gi|289583622|ref|YP_003482032.1|	-	0.00015	22.2	1.0	0.11	13.1	0.9	2.8	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289583622|ref|YP_003482032.1|	-	0.00046	19.5	0.2	0.43	9.8	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|289583622|ref|YP_003482032.1|	-	0.0016	17.4	2.6	0.18	10.6	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
NAD_binding_9	PF13454.6	gi|289583622|ref|YP_003482032.1|	-	0.002	18.1	3.0	0.51	10.3	0.1	2.4	2	0	0	2	2	2	2	FAD-NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289583622|ref|YP_003482032.1|	-	0.0038	16.6	0.2	0.0076	15.6	0.2	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_8	PF13450.6	gi|289583622|ref|YP_003482032.1|	-	0.0045	17.2	1.1	0.021	15.0	0.7	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|289583622|ref|YP_003482032.1|	-	0.0054	15.9	4.2	0.54	9.3	2.9	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Amino_oxidase	PF01593.24	gi|289583622|ref|YP_003482032.1|	-	0.0065	15.8	0.0	0.0088	15.4	0.0	1.2	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
FAD_binding_3	PF01494.19	gi|289583622|ref|YP_003482032.1|	-	0.04	13.2	1.6	0.4	9.9	0.5	2.1	2	0	0	2	2	2	0	FAD	binding	domain
Thi4	PF01946.17	gi|289583622|ref|YP_003482032.1|	-	0.055	12.7	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Thi4	family
FAD_oxidored	PF12831.7	gi|289583622|ref|YP_003482032.1|	-	0.17	11.2	3.6	3.6	6.8	3.6	2.1	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
MFS_1	PF07690.16	gi|289583623|ref|YP_003482033.1|	-	2.6e-51	174.6	57.4	2.3e-37	128.7	24.8	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_4	PF06779.14	gi|289583623|ref|YP_003482033.1|	-	4.3e-05	23.0	36.6	5.8e-05	22.5	36.6	1.1	1	0	0	1	1	1	1	Uncharacterised	MFS-type	transporter	YbfB
MFS_1_like	PF12832.7	gi|289583623|ref|YP_003482033.1|	-	0.0024	16.8	21.8	0.017	14.0	7.7	2.9	1	1	2	3	3	3	3	MFS_1	like	family
Thiolase_N	PF00108.23	gi|289583624|ref|YP_003482034.1|	-	4e-07	29.7	0.0	1.9e-06	27.4	0.0	2.0	2	1	0	2	2	2	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.26	gi|289583624|ref|YP_003482034.1|	-	0.002	17.8	1.4	0.041	13.5	0.4	2.3	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.10	gi|289583624|ref|YP_003482034.1|	-	0.016	15.1	0.5	7.2	6.5	0.1	2.6	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF35_N	PF12172.8	gi|289583625|ref|YP_003482035.1|	-	5.7e-12	45.3	3.3	5.7e-12	45.3	3.3	1.8	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OB_aCoA_assoc	PF01796.17	gi|289583625|ref|YP_003482035.1|	-	1.1e-09	38.1	0.6	5.5e-09	35.9	0.2	2.0	2	0	0	2	2	2	1	DUF35	OB-fold	domain,	acyl-CoA-associated
Zn_Tnp_IS1595	PF12760.7	gi|289583625|ref|YP_003482035.1|	-	6.7	6.8	7.4	1.4	9.0	1.4	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Peptidase_M20	PF01546.28	gi|289583626|ref|YP_003482036.1|	-	4.1e-31	108.3	0.1	5.9e-31	107.8	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289583626|ref|YP_003482036.1|	-	5.5e-18	64.9	0.0	1e-17	64.0	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Usp	PF00582.26	gi|289583627|ref|YP_003482037.1|	-	1.2e-17	64.8	1.8	1.7e-17	64.3	1.8	1.2	1	1	0	1	1	1	1	Universal	stress	protein	family
FAD-oxidase_C	PF02913.19	gi|289583628|ref|YP_003482038.1|	-	2.3e-60	204.4	0.2	3.2e-60	203.8	0.2	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|289583628|ref|YP_003482038.1|	-	2.3e-40	137.5	2.4	4.6e-40	136.6	2.4	1.5	1	0	0	1	1	1	1	FAD	binding	domain
MR_MLE_C	PF13378.6	gi|289583629|ref|YP_003482039.1|	-	1.4e-58	198.0	0.4	2e-58	197.5	0.4	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|289583629|ref|YP_003482039.1|	-	4.9e-16	59.0	0.1	1.9e-15	57.1	0.0	1.9	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Enolase_N	PF03952.16	gi|289583629|ref|YP_003482039.1|	-	0.051	13.7	0.0	0.12	12.6	0.0	1.6	1	0	0	1	1	1	0	Enolase,	N-terminal	domain
AsnC_trans_reg	PF01037.21	gi|289583630|ref|YP_003482040.1|	-	3e-12	46.3	0.5	6.2e-12	45.3	0.5	1.5	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|289583630|ref|YP_003482040.1|	-	1.5e-09	37.2	0.3	2.4e-09	36.6	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|289583630|ref|YP_003482040.1|	-	8.4e-08	31.9	0.1	1.9e-07	30.8	0.1	1.6	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
MarR	PF01047.22	gi|289583630|ref|YP_003482040.1|	-	7e-06	25.9	0.1	1.3e-05	25.0	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.20	gi|289583630|ref|YP_003482040.1|	-	9.2e-06	25.4	0.1	1.9e-05	24.4	0.1	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|289583630|ref|YP_003482040.1|	-	3.1e-05	24.0	0.2	6e-05	23.0	0.2	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|289583630|ref|YP_003482040.1|	-	6.6e-05	22.7	0.1	0.00011	22.0	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|289583630|ref|YP_003482040.1|	-	0.00012	21.9	1.0	0.00021	21.2	0.4	1.8	2	0	0	2	2	1	1	HTH	domain
HTH_IclR	PF09339.10	gi|289583630|ref|YP_003482040.1|	-	0.0002	21.1	0.0	0.00036	20.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_WhiA	PF02650.14	gi|289583630|ref|YP_003482040.1|	-	0.00036	20.8	0.2	0.00082	19.7	0.1	1.6	2	0	0	2	2	1	1	WhiA	C-terminal	HTH	domain
HTH_10	PF04967.12	gi|289583630|ref|YP_003482040.1|	-	0.00053	19.7	1.2	0.0012	18.6	0.1	2.2	3	0	0	3	3	3	1	HTH	DNA	binding	domain
TrmB	PF01978.19	gi|289583630|ref|YP_003482040.1|	-	0.00082	19.2	0.3	0.015	15.1	0.1	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|289583630|ref|YP_003482040.1|	-	0.0011	19.5	0.3	0.0021	18.5	0.3	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.12	gi|289583630|ref|YP_003482040.1|	-	0.0012	18.6	0.2	0.0029	17.3	0.2	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Mga	PF08280.11	gi|289583630|ref|YP_003482040.1|	-	0.0017	18.4	0.2	0.0027	17.7	0.2	1.3	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_30	PF13556.6	gi|289583630|ref|YP_003482040.1|	-	0.0026	17.5	0.0	0.0052	16.5	0.0	1.5	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
HTH_41	PF14502.6	gi|289583630|ref|YP_003482040.1|	-	0.014	15.1	0.0	0.027	14.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|289583630|ref|YP_003482040.1|	-	0.015	15.6	1.0	0.052	13.9	0.2	2.1	3	0	0	3	3	2	0	Transcriptional	regulator
Sigma70_r4	PF04545.16	gi|289583630|ref|YP_003482040.1|	-	0.024	14.1	0.1	0.054	13.0	0.1	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_Crp_2	PF13545.6	gi|289583630|ref|YP_003482040.1|	-	0.042	13.8	0.1	0.11	12.5	0.1	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
TetR_N	PF00440.23	gi|289583630|ref|YP_003482040.1|	-	0.045	13.5	0.0	3.2	7.6	0.0	2.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
C1q	PF00386.21	gi|289583630|ref|YP_003482040.1|	-	0.056	13.7	0.0	0.07	13.3	0.0	1.2	1	0	0	1	1	1	0	C1q	domain
B-block_TFIIIC	PF04182.12	gi|289583630|ref|YP_003482040.1|	-	0.06	13.5	0.0	0.098	12.8	0.0	1.5	2	0	0	2	2	1	0	B-block	binding	subunit	of	TFIIIC
DDRGK	PF09756.9	gi|289583630|ref|YP_003482040.1|	-	0.063	12.9	2.0	0.43	10.1	0.2	2.0	2	0	0	2	2	2	0	DDRGK	domain
HTH_8	PF02954.19	gi|289583630|ref|YP_003482040.1|	-	0.13	12.0	0.1	0.37	10.6	0.0	1.9	2	1	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
CoA_transf_3	PF02515.17	gi|289583631|ref|YP_003482041.1|	-	6.1e-111	371.1	0.0	6.9e-111	370.9	0.0	1.0	1	0	0	1	1	1	1	CoA-transferase	family	III
MFS_1	PF07690.16	gi|289583632|ref|YP_003482042.1|	-	1.6e-47	162.1	33.6	1.6e-47	162.1	33.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289583632|ref|YP_003482042.1|	-	2.4e-11	43.1	6.8	5.1e-08	32.2	0.8	2.3	2	0	0	2	2	2	2	MFS_1	like	family
LacY_symp	PF01306.19	gi|289583632|ref|YP_003482042.1|	-	2.3e-05	23.3	2.2	2.3e-05	23.3	2.2	2.5	3	0	0	3	3	3	2	LacY	proton/sugar	symporter
Sugar_tr	PF00083.24	gi|289583632|ref|YP_003482042.1|	-	0.0066	15.4	3.4	0.0066	15.4	3.4	2.4	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
Phage_holin_3_2	PF04550.12	gi|289583632|ref|YP_003482042.1|	-	0.055	14.0	0.4	0.055	14.0	0.4	2.6	3	0	0	3	3	3	0	Phage	holin	family	2
MFS_4	PF06779.14	gi|289583632|ref|YP_003482042.1|	-	3	7.0	26.9	0.11	11.8	9.9	3.4	2	2	1	3	3	3	0	Uncharacterised	MFS-type	transporter	YbfB
Pex14_N	PF04695.13	gi|289583632|ref|YP_003482042.1|	-	5.5	7.6	4.3	1.8	9.2	1.0	1.9	2	0	0	2	2	2	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
IclR	PF01614.18	gi|289583633|ref|YP_003482043.1|	-	7e-30	103.5	0.4	7.5e-29	100.2	0.1	2.1	2	0	0	2	2	2	1	Bacterial	transcriptional	regulator
HTH_IclR	PF09339.10	gi|289583633|ref|YP_003482043.1|	-	2.4e-09	36.9	1.9	4.1e-09	36.1	0.3	2.1	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289583633|ref|YP_003482043.1|	-	4.4e-06	26.1	0.0	7.8e-06	25.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|289583633|ref|YP_003482043.1|	-	1.6e-05	24.7	0.1	3e-05	23.9	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.20	gi|289583633|ref|YP_003482043.1|	-	2.1e-05	24.3	0.0	4.1e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.19	gi|289583633|ref|YP_003482043.1|	-	0.00053	20.1	0.0	0.0011	19.1	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.6	gi|289583633|ref|YP_003482043.1|	-	0.00088	19.4	0.0	0.0017	18.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|289583633|ref|YP_003482043.1|	-	0.0012	18.7	0.1	0.0036	17.2	0.1	1.7	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|289583633|ref|YP_003482043.1|	-	0.0025	17.8	0.1	0.0056	16.7	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4148	PF13663.6	gi|289583633|ref|YP_003482043.1|	-	0.0044	17.2	0.4	0.46	10.7	0.1	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4148)
HTH_10	PF04967.12	gi|289583633|ref|YP_003482043.1|	-	0.0068	16.2	0.1	0.013	15.3	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_27	PF13463.6	gi|289583633|ref|YP_003482043.1|	-	0.013	16.0	0.1	0.027	15.0	0.1	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|289583633|ref|YP_003482043.1|	-	0.013	15.4	0.0	0.033	14.1	0.0	1.7	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Diacid_rec	PF05651.13	gi|289583633|ref|YP_003482043.1|	-	0.018	14.7	0.0	0.038	13.7	0.0	1.6	1	0	0	1	1	1	0	Putative	sugar	diacid	recognition
Autoind_bind	PF03472.15	gi|289583633|ref|YP_003482043.1|	-	0.025	14.0	0.0	0.052	13.0	0.0	1.4	1	0	0	1	1	1	0	Autoinducer	binding	domain
LexA_DNA_bind	PF01726.16	gi|289583633|ref|YP_003482043.1|	-	0.04	13.7	0.0	0.087	12.6	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_11	PF08279.12	gi|289583633|ref|YP_003482043.1|	-	0.053	13.5	0.0	0.12	12.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
Rrf2	PF02082.20	gi|289583633|ref|YP_003482043.1|	-	0.058	13.7	0.0	0.16	12.4	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
GAF_2	PF13185.6	gi|289583633|ref|YP_003482043.1|	-	0.071	13.4	1.0	0.57	10.5	0.2	2.4	1	1	2	3	3	3	0	GAF	domain
HTH_45	PF14947.6	gi|289583633|ref|YP_003482043.1|	-	0.11	12.5	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix
Mga	PF05043.13	gi|289583633|ref|YP_003482043.1|	-	0.17	12.5	0.0	0.29	11.7	0.0	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
Rnk_N	PF14760.6	gi|289583633|ref|YP_003482043.1|	-	1.1	9.8	5.8	1.9	9.1	0.2	2.9	3	0	0	3	3	3	0	Rnk	N-terminus
OCD_Mu_crystall	PF02423.15	gi|289583635|ref|YP_003482045.1|	-	1.6e-62	211.3	0.5	1.9e-62	211.0	0.5	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.20	gi|289583635|ref|YP_003482045.1|	-	1.8e-06	28.1	0.0	2.8e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.17	gi|289583635|ref|YP_003482045.1|	-	0.0014	19.1	0.1	0.0027	18.2	0.1	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|289583635|ref|YP_003482045.1|	-	0.031	15.1	0.0	0.058	14.2	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_7	PF13241.6	gi|289583635|ref|YP_003482045.1|	-	0.069	13.6	0.1	0.13	12.7	0.1	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
NAD_binding_10	PF13460.6	gi|289583635|ref|YP_003482045.1|	-	0.13	12.2	3.1	0.39	10.6	3.1	1.8	1	1	0	1	1	1	0	NAD(P)H-binding
DctM	PF06808.12	gi|289583636|ref|YP_003482046.1|	-	2.2e-52	178.3	46.9	4.2e-52	177.4	46.9	1.4	1	0	0	1	1	1	1	Tripartite	ATP-independent	periplasmic	transporter,	DctM	component
Holin_SPP1	PF04688.13	gi|289583636|ref|YP_003482046.1|	-	3.4	7.9	5.4	8.8	6.6	0.5	3.9	2	0	0	2	2	2	0	SPP1	phage	holin
NMT1_3	PF16868.5	gi|289583637|ref|YP_003482047.1|	-	3.4e-19	69.4	0.0	4e-19	69.1	0.0	1.1	1	0	0	1	1	1	1	NMT1-like	family
OpuAC	PF04069.12	gi|289583637|ref|YP_003482047.1|	-	0.0024	17.5	0.1	0.0045	16.6	0.1	1.4	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
TAT_signal	PF10518.9	gi|289583637|ref|YP_003482047.1|	-	0.0056	16.5	1.1	0.011	15.6	1.1	1.4	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
SBP_bac_11	PF13531.6	gi|289583637|ref|YP_003482047.1|	-	0.017	14.9	0.1	0.027	14.2	0.1	1.3	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
AbiJ_NTD4	PF18863.1	gi|289583637|ref|YP_003482047.1|	-	0.024	15.1	0.1	0.039	14.4	0.1	1.3	1	0	0	1	1	1	0	AbiJ	N-terminal	domain	4
NMT1	PF09084.11	gi|289583637|ref|YP_003482047.1|	-	0.062	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	NMT1/THI5	like
DUF58	PF01882.18	gi|289583639|ref|YP_003482049.1|	-	4.9e-19	68.4	5.2	2.4e-18	66.2	0.2	3.5	3	0	0	3	3	3	1	Protein	of	unknown	function	DUF58
NPCBM_assoc	PF10633.9	gi|289583639|ref|YP_003482049.1|	-	2.4e-05	24.5	0.6	2.4e-05	24.5	0.6	2.7	3	0	0	3	3	3	1	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
DUF11	PF01345.18	gi|289583639|ref|YP_003482049.1|	-	2.5e-05	24.5	0.3	2.5e-05	24.5	0.3	3.3	3	0	0	3	3	3	1	Domain	of	unknown	function	DUF11
TRAP_beta	PF05753.14	gi|289583639|ref|YP_003482049.1|	-	0.0015	18.0	0.0	0.0037	16.7	0.0	1.6	1	0	0	1	1	1	1	Translocon-associated	protein	beta	(TRAPB)
SDA1	PF05285.12	gi|289583639|ref|YP_003482049.1|	-	0.026	14.0	25.8	0.043	13.3	10.4	2.2	2	0	0	2	2	2	0	SDA1
DUF3040	PF11239.8	gi|289583639|ref|YP_003482049.1|	-	0.5	10.7	8.2	0.7	10.2	0.0	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3040)
Apt1	PF10351.9	gi|289583639|ref|YP_003482049.1|	-	2.4	6.9	10.6	1.5	7.6	2.5	2.1	2	0	0	2	2	2	0	Golgi-body	localisation	protein	domain
Presenilin	PF01080.17	gi|289583639|ref|YP_003482049.1|	-	2.8	6.6	12.4	0.083	11.6	1.0	2.4	2	0	0	2	2	2	0	Presenilin
SAPS	PF04499.15	gi|289583639|ref|YP_003482049.1|	-	7.9	5.1	14.3	1.2	7.8	3.7	2.1	2	0	0	2	2	2	0	SIT4	phosphatase-associated	protein
DUF4129	PF13559.6	gi|289583640|ref|YP_003482050.1|	-	1.1e-07	32.0	1.5	2.6e-07	30.8	1.5	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4129)
DUF4131	PF13567.6	gi|289583640|ref|YP_003482050.1|	-	0.026	14.2	2.9	0.21	11.2	1.2	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4131)
DUF4473	PF14747.6	gi|289583640|ref|YP_003482050.1|	-	0.11	13.0	0.1	0.21	12.2	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
Peptidase_M20	PF01546.28	gi|289583641|ref|YP_003482051.1|	-	4e-33	114.9	0.9	5.1e-33	114.5	0.9	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|289583641|ref|YP_003482051.1|	-	1.8e-07	31.1	0.0	2.5e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
M20_dimer	PF07687.14	gi|289583641|ref|YP_003482051.1|	-	5.9e-07	29.4	0.0	2e-06	27.7	0.0	1.8	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
NUDIX	PF00293.28	gi|289583641|ref|YP_003482051.1|	-	0.18	11.8	1.3	0.59	10.2	1.3	1.9	1	1	0	1	1	1	0	NUDIX	domain
HgmA	PF04209.13	gi|289583641|ref|YP_003482051.1|	-	0.19	10.4	0.0	0.33	9.6	0.0	1.3	1	0	0	1	1	1	0	homogentisate	1,2-dioxygenase
Aminotran_3	PF00202.21	gi|289583642|ref|YP_003482052.1|	-	1.2e-100	337.0	0.0	1.5e-100	336.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|289583642|ref|YP_003482052.1|	-	0.11	11.6	0.0	0.22	10.7	0.0	1.4	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
Acetyltransf_10	PF13673.7	gi|289583643|ref|YP_003482053.1|	-	1.6e-15	57.2	0.0	1.9e-15	57.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|289583643|ref|YP_003482053.1|	-	1.1e-13	51.4	0.0	1.6e-13	50.9	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289583643|ref|YP_003482053.1|	-	3.5e-11	43.4	0.0	5.4e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.7	gi|289583643|ref|YP_003482053.1|	-	2.9e-05	24.2	0.6	4.4e-05	23.7	0.5	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|289583643|ref|YP_003482053.1|	-	0.0018	18.3	0.1	0.018	15.1	0.1	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|289583643|ref|YP_003482053.1|	-	0.005	16.9	0.0	0.0083	16.2	0.0	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
TetR_N	PF00440.23	gi|289583643|ref|YP_003482053.1|	-	0.022	14.6	0.0	2.2	8.1	0.0	2.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
PCP_red	PF08369.10	gi|289583643|ref|YP_003482053.1|	-	0.098	12.9	0.0	0.33	11.2	0.0	2.0	2	0	0	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
Peptidase_M24	PF00557.24	gi|289583645|ref|YP_003482055.1|	-	9.4e-64	214.9	0.9	1.2e-63	214.6	0.9	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|289583645|ref|YP_003482055.1|	-	3.8e-29	102.0	0.1	8.8e-29	100.8	0.1	1.6	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
PAS_4	PF08448.10	gi|289583646|ref|YP_003482056.1|	-	4.7e-33	113.7	6.0	6.1e-15	55.4	0.1	4.5	3	1	0	3	3	3	3	PAS	fold
HATPase_c	PF02518.26	gi|289583646|ref|YP_003482056.1|	-	2.1e-29	102.3	0.1	2.5e-28	98.8	0.0	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.7	gi|289583646|ref|YP_003482056.1|	-	3.6e-29	101.1	0.4	1.5e-08	34.8	0.0	3.6	3	0	0	3	3	3	3	PAS	domain
PAS	PF00989.25	gi|289583646|ref|YP_003482056.1|	-	2.1e-28	98.6	1.0	4.4e-09	36.3	0.0	4.3	3	1	0	3	3	3	3	PAS	fold
PAS_8	PF13188.7	gi|289583646|ref|YP_003482056.1|	-	3e-17	62.2	1.9	0.00041	20.3	0.0	4.3	4	0	0	4	4	4	3	PAS	domain
PAS_7	PF12860.7	gi|289583646|ref|YP_003482056.1|	-	2e-14	53.7	0.5	6.3e-05	23.1	0.1	3.8	3	1	0	3	3	3	3	PAS	fold
PAS_3	PF08447.12	gi|289583646|ref|YP_003482056.1|	-	1.1e-12	48.1	0.8	0.00057	20.1	0.0	4.9	5	0	0	5	5	4	3	PAS	fold
HisKA	PF00512.25	gi|289583646|ref|YP_003482056.1|	-	1.3e-10	41.2	0.1	1.3e-10	41.2	0.1	2.9	3	1	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
PAS_10	PF13596.6	gi|289583646|ref|YP_003482056.1|	-	5.7e-05	23.7	0.2	2.2	8.9	0.0	4.1	3	1	0	3	3	3	2	PAS	domain
HATPase_c_5	PF14501.6	gi|289583646|ref|YP_003482056.1|	-	7.7e-05	22.5	0.0	0.00019	21.3	0.0	1.6	1	0	0	1	1	1	1	GHKL	domain
HATPase_c_2	PF13581.6	gi|289583646|ref|YP_003482056.1|	-	0.0016	18.4	0.1	0.0073	16.3	0.0	2.0	1	1	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c_3	PF13589.6	gi|289583646|ref|YP_003482056.1|	-	0.0053	16.6	0.0	0.012	15.5	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_11	PF14598.6	gi|289583646|ref|YP_003482056.1|	-	0.047	13.8	0.0	0.12	12.5	0.0	1.7	1	0	0	1	1	1	0	PAS	domain
Hydantoinase_B	PF02538.14	gi|289583647|ref|YP_003482057.1|	-	7.9e-148	493.1	0.2	1.3e-147	492.4	0.2	1.3	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.18	gi|289583648|ref|YP_003482058.1|	-	1.1e-97	326.8	1.0	5.6e-95	317.9	0.1	2.5	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|289583648|ref|YP_003482058.1|	-	1.1e-50	171.8	2.8	1.2e-49	168.5	0.3	2.6	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.6	gi|289583648|ref|YP_003482058.1|	-	0.002	16.8	3.1	0.13	10.9	0.1	2.8	2	1	0	2	2	2	2	MutL	protein
FtsA	PF14450.6	gi|289583648|ref|YP_003482058.1|	-	0.013	15.9	1.1	0.48	10.9	0.0	2.8	3	0	0	3	3	3	0	Cell	division	protein	FtsA
ROK	PF00480.20	gi|289583648|ref|YP_003482058.1|	-	0.018	14.5	0.9	0.12	11.8	0.0	2.7	3	0	0	3	3	3	0	ROK	family
DUF2158	PF09926.9	gi|289583648|ref|YP_003482058.1|	-	0.14	11.9	0.1	0.86	9.4	0.1	2.3	3	0	0	3	3	3	0	Uncharacterized	small	protein	(DUF2158)
Abhydrolase_6	PF12697.7	gi|289583648|ref|YP_003482058.1|	-	6.3	7.3	7.0	4.5	7.8	4.5	2.1	2	1	0	2	2	2	0	Alpha/beta	hydrolase	family
MFS_1	PF07690.16	gi|289583649|ref|YP_003482059.1|	-	2e-21	76.4	60.8	6.2e-17	61.6	44.0	2.5	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Ndc1_Nup	PF09531.10	gi|289583649|ref|YP_003482059.1|	-	0.45	9.2	5.0	0.78	8.4	5.0	1.3	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
Thiolase_C	PF02803.18	gi|289583650|ref|YP_003482060.1|	-	0.22	11.2	3.1	6.3	6.5	0.2	2.0	1	1	1	2	2	2	0	Thiolase,	C-terminal	domain
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Natrialba_magadii_ATCC_43099_uid46245/NC_013923.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Natrialba_magadii_ATCC_43099_uid46245/NC_013923.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Natrialba_magadii_ATCC_43099_uid46245/NC_013923.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Natrialba_magadii_ATCC_43099_uid46245/NC_013923.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 15:54:17 2019
# [ok]