# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phage_integrase PF00589.17 gi|336120991|ref|YP_004564626.1| - 2.3e-06 27.4 0.0 6.1e-06 26.0 0.0 1.8 1 0 0 1 1 1 1 Phage integrase family Integrase_1 PF12835.2 gi|336120991|ref|YP_004564626.1| - 9.8e-05 22.1 0.0 0.00031 20.5 0.0 1.8 1 1 0 1 1 1 1 Integrase Phage_int_SAM_4 PF13495.1 gi|336120991|ref|YP_004564626.1| - 0.0011 19.1 0.2 0.0072 16.6 0.2 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|336120991|ref|YP_004564626.1| - 0.012 15.7 0.0 0.041 14.0 0.0 1.9 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_3 PF14659.1 gi|336120991|ref|YP_004564626.1| - 0.15 12.3 6.3 0.28 11.4 0.8 3.6 2 1 1 3 3 3 0 Phage integrase, N-terminal SAM-like domain Methyltransf_26 PF13659.1 gi|336120993|ref|YP_004564628.1| - 1.6e-11 44.2 0.0 9.4e-11 41.7 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|336120993|ref|YP_004564628.1| - 3.6e-08 33.1 0.0 0.0085 15.6 0.0 2.6 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Eco57I PF07669.6 gi|336120993|ref|YP_004564628.1| - 1.2e-06 28.7 1.5 3.9e-06 27.1 0.1 2.7 2 0 0 2 2 2 1 Eco57I restriction-modification methylase Sir1 PF11603.3 gi|336120994|ref|YP_004564629.1| - 0.093 12.8 1.3 0.45 10.6 0.9 2.0 1 1 0 1 1 1 0 Regulatory protein Sir1 Helicase_C PF00271.26 gi|336120995|ref|YP_004564630.1| - 1.6e-18 66.3 0.0 4.8e-18 64.8 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 gi|336120995|ref|YP_004564630.1| - 1.3e-16 60.3 0.1 2.7e-09 36.2 0.1 2.6 2 0 0 2 2 2 2 SNF2 family N-terminal domain PLDc_2 PF13091.1 gi|336120995|ref|YP_004564630.1| - 1.5e-12 47.3 1.2 1.5e-12 47.3 0.8 2.8 2 1 0 2 2 2 1 PLD-like domain DEAD PF00270.24 gi|336120995|ref|YP_004564630.1| - 8.9e-07 28.5 1.8 0.0013 18.2 0.0 3.9 4 1 1 5 5 5 2 DEAD/DEAH box helicase RE_NgoFVII PF09565.5 gi|336120995|ref|YP_004564630.1| - 1.2e-06 27.7 0.6 1.2e-06 27.7 0.4 3.5 4 1 1 5 5 5 1 NgoFVII restriction endonuclease ResIII PF04851.10 gi|336120995|ref|YP_004564630.1| - 6.6e-06 26.0 4.0 0.0034 17.2 0.0 3.6 3 2 0 4 4 4 2 Type III restriction enzyme, res subunit AAA_22 PF13401.1 gi|336120995|ref|YP_004564630.1| - 0.0035 17.4 0.2 0.035 14.2 0.0 2.7 2 1 0 2 2 2 1 AAA domain Flavi_DEAD PF07652.9 gi|336120995|ref|YP_004564630.1| - 0.013 15.3 0.0 0.028 14.1 0.0 1.5 1 0 0 1 1 1 0 Flavivirus DEAD domain SSXT PF05030.7 gi|336120995|ref|YP_004564630.1| - 0.029 13.9 0.4 0.13 11.9 0.0 2.2 2 0 0 2 2 2 0 SSXT protein (N-terminal region) SRP54 PF00448.17 gi|336120995|ref|YP_004564630.1| - 0.044 13.2 0.2 0.31 10.4 0.0 2.4 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain DUF869 PF05911.6 gi|336120995|ref|YP_004564630.1| - 5.2 5.1 9.5 1.1 7.4 1.2 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF869) Plasmid_stabil PF05016.9 gi|336120996|ref|YP_004564631.1| - 3.2e-07 30.6 0.9 4.2e-07 30.2 0.7 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Tantalus PF15386.1 gi|336120996|ref|YP_004564631.1| - 0.12 12.1 3.6 2.8 7.7 0.0 2.2 2 0 0 2 2 2 0 Drosophila Tantalus-like DUF2683 PF10884.3 gi|336120997|ref|YP_004564632.1| - 3.9e-34 116.4 7.2 4.2e-34 116.3 5.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) RHH_1 PF01402.16 gi|336120997|ref|YP_004564632.1| - 0.0012 18.6 1.7 0.075 12.9 0.0 2.9 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family Mistic PF11458.3 gi|336120997|ref|YP_004564632.1| - 0.022 15.1 1.3 0.036 14.4 0.9 1.3 1 0 0 1 1 1 0 Membrane-integrating protein Mistic DUF673 PF05054.7 gi|336120997|ref|YP_004564632.1| - 0.042 12.4 1.6 0.047 12.2 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF673) SRP54_N PF02881.14 gi|336120997|ref|YP_004564632.1| - 0.059 13.4 0.7 0.095 12.8 0.5 1.5 1 1 0 1 1 1 0 SRP54-type protein, helical bundle domain Ofd1_CTDD PF10637.4 gi|336120997|ref|YP_004564632.1| - 0.14 11.2 1.2 0.15 11.1 0.8 1.0 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term SSXT PF05030.7 gi|336120997|ref|YP_004564632.1| - 2.4 7.7 6.0 3 7.4 1.2 2.5 2 1 1 3 3 3 0 SSXT protein (N-terminal region) PemK PF02452.12 gi|336120998|ref|YP_004564633.1| - 4.9e-19 68.5 0.4 5.5e-19 68.3 0.3 1.0 1 0 0 1 1 1 1 PemK-like protein EzrA PF06160.7 gi|336121000|ref|YP_004564635.1| - 0.0052 15.0 2.1 0.0061 14.8 1.4 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA BLOC1_2 PF10046.4 gi|336121000|ref|YP_004564635.1| - 0.0096 16.0 3.1 0.0096 16.0 2.2 2.2 2 1 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cdc6_C PF09079.6 gi|336121000|ref|YP_004564635.1| - 0.01 15.5 0.1 0.024 14.3 0.0 1.7 1 0 0 1 1 1 0 CDC6, C terminal Seryl_tRNA_N PF02403.17 gi|336121000|ref|YP_004564635.1| - 0.016 15.1 1.7 0.016 15.1 1.2 2.0 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF87 PF01935.12 gi|336121000|ref|YP_004564635.1| - 0.033 14.0 1.7 0.04 13.7 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF87 HSBP1 PF06825.7 gi|336121000|ref|YP_004564635.1| - 0.034 13.7 1.2 3.6 7.2 0.1 2.7 2 0 0 2 2 2 0 Heat shock factor binding protein 1 HTH_15 PF12324.3 gi|336121000|ref|YP_004564635.1| - 0.088 12.4 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Spc24 PF08286.6 gi|336121000|ref|YP_004564635.1| - 0.11 12.1 8.2 1.3 8.7 5.2 2.3 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 GHMP_kinases_C PF08544.8 gi|336121000|ref|YP_004564635.1| - 0.13 12.4 0.5 11 6.2 0.0 2.2 1 1 0 2 2 2 0 GHMP kinases C terminal DUF4201 PF13870.1 gi|336121000|ref|YP_004564635.1| - 0.15 11.5 7.4 0.87 9.0 5.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) TBPIP PF07106.8 gi|336121000|ref|YP_004564635.1| - 0.28 10.7 14.3 0.084 12.4 4.6 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) TMF_TATA_bd PF12325.3 gi|336121000|ref|YP_004564635.1| - 0.34 10.6 6.3 0.062 13.0 1.0 2.1 2 1 1 3 3 2 0 TATA element modulatory factor 1 TATA binding DUF1664 PF07889.7 gi|336121000|ref|YP_004564635.1| - 0.37 10.6 4.6 0.46 10.2 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Enkurin PF13864.1 gi|336121000|ref|YP_004564635.1| - 0.42 10.8 3.1 0.6 10.3 0.5 2.3 1 1 1 2 2 2 0 Calmodulin-binding NPV_P10 PF05531.7 gi|336121000|ref|YP_004564635.1| - 1 9.6 7.5 6 7.1 5.2 2.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Syntaxin PF00804.20 gi|336121000|ref|YP_004564635.1| - 1 9.5 10.4 6.7 6.9 2.3 3.4 1 1 2 3 3 3 0 Syntaxin Prefoldin PF02996.12 gi|336121000|ref|YP_004564635.1| - 1.2 8.7 4.7 4 7.1 0.0 2.7 2 1 1 3 3 3 0 Prefoldin subunit Syntaxin-6_N PF09177.6 gi|336121000|ref|YP_004564635.1| - 1.4 9.3 6.0 3.4 8.1 1.4 2.5 2 1 1 3 3 2 0 Syntaxin 6, N-terminal bZIP_1 PF00170.16 gi|336121000|ref|YP_004564635.1| - 1.4 8.9 4.6 0.89 9.5 0.9 2.2 2 0 0 2 2 2 0 bZIP transcription factor HR1 PF02185.11 gi|336121000|ref|YP_004564635.1| - 2.8 7.7 7.3 0.79 9.5 0.3 2.8 2 1 1 3 3 3 0 Hr1 repeat DUF334 PF03904.8 gi|336121000|ref|YP_004564635.1| - 3.6 6.8 8.3 2.5 7.3 4.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF334) FlaC_arch PF05377.6 gi|336121000|ref|YP_004564635.1| - 6 6.8 11.6 3.3 7.6 0.8 2.8 3 0 0 3 3 2 0 Flagella accessory protein C (FlaC) DUF904 PF06005.7 gi|336121000|ref|YP_004564635.1| - 8.4 6.7 10.5 4.6 7.5 2.3 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF904)