# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cdc6_C PF09079.6 gi|84488832|ref|YP_447064.1| - 5e-22 77.4 0.4 1.6e-21 75.8 0.3 1.9 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|84488832|ref|YP_447064.1| - 1.6e-11 44.4 0.0 3.5e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|84488832|ref|YP_447064.1| - 3.6e-05 23.8 0.0 0.00011 22.2 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|84488832|ref|YP_447064.1| - 0.00012 22.3 0.0 0.00026 21.1 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|84488832|ref|YP_447064.1| - 0.0039 16.9 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) E2F_TDP PF02319.15 gi|84488832|ref|YP_447064.1| - 0.0047 16.4 0.2 0.019 14.5 0.1 2.0 1 1 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain Arch_ATPase PF01637.13 gi|84488832|ref|YP_447064.1| - 0.0052 16.5 0.5 0.0052 16.5 0.3 2.0 2 0 0 2 2 2 1 Archaeal ATPase B-block_TFIIIC PF04182.7 gi|84488832|ref|YP_447064.1| - 0.015 15.1 0.0 0.077 12.8 0.0 2.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC NB-ARC PF00931.17 gi|84488832|ref|YP_447064.1| - 0.02 13.7 0.1 0.031 13.1 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|84488832|ref|YP_447064.1| - 0.028 13.9 0.1 0.14 11.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|84488832|ref|YP_447064.1| - 0.11 12.7 4.6 0.073 13.3 0.4 2.7 2 2 0 2 2 2 0 AAA domain DEAD PF00270.24 gi|84488832|ref|YP_447064.1| - 0.78 9.2 5.6 2 7.8 0.2 2.7 2 1 1 3 3 3 0 DEAD/DEAH box helicase Cupin_2 PF07883.6 gi|84488833|ref|YP_447065.1| - 8.4e-10 38.0 0.0 1.2e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|84488833|ref|YP_447065.1| - 9.5e-06 25.3 0.0 1.1e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|84488833|ref|YP_447065.1| - 0.0028 17.0 0.0 0.0093 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF861) EutQ PF06249.7 gi|84488833|ref|YP_447065.1| - 0.0028 17.2 0.1 0.0033 16.9 0.1 1.2 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ DUF1498 PF07385.7 gi|84488833|ref|YP_447065.1| - 0.0034 16.5 0.0 0.0034 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1498) ARD PF03079.9 gi|84488833|ref|YP_447065.1| - 0.008 16.1 0.1 0.011 15.6 0.1 1.3 1 1 0 1 1 1 1 ARD/ARD' family CENP-C_C PF11699.3 gi|84488833|ref|YP_447065.1| - 0.019 14.9 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like Cupin_6 PF12852.2 gi|84488833|ref|YP_447065.1| - 0.027 14.1 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Cupin MannoseP_isomer PF01050.13 gi|84488833|ref|YP_447065.1| - 0.03 13.9 0.0 0.055 13.0 0.0 1.4 1 1 0 1 1 1 0 Mannose-6-phosphate isomerase Cupin_1 PF00190.17 gi|84488833|ref|YP_447065.1| - 0.053 12.9 0.0 0.13 11.7 0.0 1.7 1 1 0 1 1 1 0 Cupin AraC_binding_2 PF14525.1 gi|84488833|ref|YP_447065.1| - 0.16 11.5 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain OTCace_N PF02729.16 gi|84488834|ref|YP_447066.1| - 3.4e-44 149.9 0.0 9.9e-44 148.4 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|84488834|ref|YP_447066.1| - 1.2e-38 132.4 0.0 5.4e-38 130.3 0.0 1.9 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GCD14 PF08704.5 gi|84488835|ref|YP_447067.1| - 2.7e-30 105.6 0.0 7.9e-27 94.3 0.0 2.4 2 1 1 3 3 3 2 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.1 gi|84488835|ref|YP_447067.1| - 5e-14 52.1 0.2 1.6e-12 47.3 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84488835|ref|YP_447067.1| - 6.6e-11 42.7 0.0 1.4e-10 41.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|84488835|ref|YP_447067.1| - 2e-07 30.7 0.0 2.5e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.7 gi|84488835|ref|YP_447067.1| - 1.1e-05 25.8 0.0 2.8e-05 24.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|84488835|ref|YP_447067.1| - 1.9e-05 24.9 0.0 3e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|84488835|ref|YP_447067.1| - 2.3e-05 23.6 0.0 6.1e-05 22.2 0.0 1.6 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_24 PF13578.1 gi|84488835|ref|YP_447067.1| - 0.00018 22.2 0.0 0.00048 20.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain RrnaAD PF00398.15 gi|84488835|ref|YP_447067.1| - 0.00025 20.1 0.0 0.00035 19.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|84488835|ref|YP_447067.1| - 0.00031 20.7 0.0 0.0011 19.0 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|84488835|ref|YP_447067.1| - 0.0004 19.8 0.0 0.0045 16.3 0.0 2.5 2 1 0 2 2 2 1 Methyltransferase small domain Methyltransf_3 PF01596.12 gi|84488835|ref|YP_447067.1| - 0.00065 18.8 0.3 0.001 18.1 0.1 1.6 2 0 0 2 2 2 1 O-methyltransferase Methyltransf_4 PF02390.12 gi|84488835|ref|YP_447067.1| - 0.00099 18.2 0.0 0.027 13.4 0.0 2.2 1 1 0 1 1 1 1 Putative methyltransferase Cons_hypoth95 PF03602.10 gi|84488835|ref|YP_447067.1| - 0.001 18.5 0.0 0.0028 17.0 0.0 1.5 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.7 gi|84488835|ref|YP_447067.1| - 0.0025 18.2 0.0 0.0077 16.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain CmcI PF04989.7 gi|84488835|ref|YP_447067.1| - 0.073 12.3 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Cephalosporin hydroxylase Baculo_gp41 PF04700.7 gi|84488835|ref|YP_447067.1| - 0.095 12.1 0.2 0.15 11.4 0.1 1.3 1 0 0 1 1 1 0 Structural glycoprotein p40/gp41 conserved region Methyltransf_8 PF05148.10 gi|84488835|ref|YP_447067.1| - 0.12 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase Endonuc_subdom PF09062.5 gi|84488835|ref|YP_447067.1| - 0.17 12.6 1.7 5.7 7.7 0.1 2.6 2 1 0 2 2 2 0 PI-PfuI Endonuclease subdomain DUF3427 PF11907.3 gi|84488836|ref|YP_447068.1| - 8.6e-71 238.0 17.1 2.5e-70 236.5 11.8 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3427) ResIII PF04851.10 gi|84488836|ref|YP_447068.1| - 6e-29 101.1 0.3 2.6e-28 99.1 0.2 2.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PLDc_2 PF13091.1 gi|84488836|ref|YP_447068.1| - 1.9e-17 63.1 0.7 1.9e-17 63.1 0.5 3.4 3 0 0 3 3 3 1 PLD-like domain Helicase_C PF00271.26 gi|84488836|ref|YP_447068.1| - 1.3e-10 40.9 0.7 8.7e-10 38.3 0.2 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|84488836|ref|YP_447068.1| - 1.2e-09 37.8 0.0 4.1e-09 36.1 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|84488836|ref|YP_447068.1| - 0.0024 18.0 0.0 0.009 16.1 0.0 2.0 1 0 0 1 1 1 1 AAA domain PhoH PF02562.11 gi|84488836|ref|YP_447068.1| - 0.014 14.6 0.1 0.047 12.9 0.0 1.9 1 0 0 1 1 1 0 PhoH-like protein NUDIX PF00293.23 gi|84488837|ref|YP_447069.1| - 1.5e-20 73.1 0.0 1.8e-20 72.9 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|84488837|ref|YP_447069.1| - 5.9e-13 48.2 0.0 6.6e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain ERCC4 PF02732.10 gi|84488838|ref|YP_447070.1| - 2.4e-27 95.4 0.1 2.4e-27 95.4 0.1 3.4 3 1 0 3 3 3 1 ERCC4 domain DEAD PF00270.24 gi|84488838|ref|YP_447070.1| - 5.7e-22 77.9 4.8 1.1e-21 77.0 0.0 3.0 3 1 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|84488838|ref|YP_447070.1| - 1.9e-21 75.6 0.0 4.9e-21 74.3 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|84488838|ref|YP_447070.1| - 1.3e-15 57.7 0.1 1.3e-15 57.7 0.0 3.8 3 2 1 5 5 5 1 Type III restriction enzyme, res subunit HHH_2 PF12826.2 gi|84488838|ref|YP_447070.1| - 6e-11 42.0 0.0 2.2e-10 40.2 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|84488838|ref|YP_447070.1| - 1.4e-10 41.2 0.0 5.2e-10 39.3 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.18 gi|84488838|ref|YP_447070.1| - 3e-09 36.0 0.1 4.9e-06 25.9 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|84488838|ref|YP_447070.1| - 0.00046 20.0 2.2 0.0081 16.0 0.1 3.3 2 1 0 2 2 2 1 Helix-hairpin-helix motif PhoH PF02562.11 gi|84488838|ref|YP_447070.1| - 0.0043 16.2 0.4 0.012 14.8 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein AAA_22 PF13401.1 gi|84488838|ref|YP_447070.1| - 0.011 15.8 1.0 0.1 12.7 0.0 2.9 3 0 0 3 3 3 0 AAA domain 5_3_exonuc PF01367.15 gi|84488838|ref|YP_447070.1| - 0.02 15.1 10.6 0.092 12.9 0.0 4.9 4 1 1 5 5 5 0 5'-3' exonuclease, C-terminal SAM fold TMP_2 PF06791.8 gi|84488838|ref|YP_447070.1| - 0.078 12.5 0.3 0.21 11.2 0.2 1.7 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF521 PF04412.8 gi|84488839|ref|YP_447071.1| - 2.2e-153 510.5 0.2 2.5e-153 510.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Fer4_12 PF13353.1 gi|84488839|ref|YP_447071.1| - 0.032 14.3 0.0 0.063 13.3 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DHHA1 PF02272.14 gi|84488840|ref|YP_447072.1| - 3.3e-13 49.1 0.0 9.9e-13 47.5 0.0 1.8 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|84488840|ref|YP_447072.1| - 6.3e-13 48.6 1.0 2.1e-12 46.9 0.3 2.0 2 0 0 2 2 2 1 DHH family Peripla_BP_2 PF01497.13 gi|84488840|ref|YP_447072.1| - 0.0066 15.5 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein SHS2_FTSA PF02491.15 gi|84488840|ref|YP_447072.1| - 0.037 13.9 0.2 0.11 12.3 0.1 1.7 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA Ribosomal_S15 PF00312.17 gi|84488841|ref|YP_447073.1| - 1.1e-22 79.5 0.2 1.8e-22 78.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 Ribosomal_S13_N PF08069.7 gi|84488841|ref|YP_447073.1| - 7.9e-18 64.0 0.1 1.5e-17 63.2 0.1 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain PMBR PF09373.5 gi|84488841|ref|YP_447073.1| - 0.1 12.6 0.3 4.2 7.4 0.1 2.6 2 0 0 2 2 2 0 Pseudomurein-binding repeat Ham1p_like PF01725.11 gi|84488842|ref|YP_447074.1| - 1.3e-52 177.9 0.0 1.5e-52 177.7 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DBI_PRT PF02277.12 gi|84488843|ref|YP_447075.1| - 2.3e-18 66.3 1.0 3.3e-18 65.8 0.7 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase Peptidase_M22 PF00814.20 gi|84488844|ref|YP_447076.1| - 1.3e-87 293.6 0.0 1.9e-87 293.1 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.17 gi|84488844|ref|YP_447076.1| - 2.7e-11 43.1 0.2 4.6e-11 42.4 0.2 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|84488844|ref|YP_447076.1| - 1.1e-10 41.0 1.5 1.8e-10 40.4 1.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.9 gi|84488844|ref|YP_447076.1| - 4.2e-07 29.2 0.0 6.6e-07 28.6 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.12 gi|84488844|ref|YP_447076.1| - 5.1e-05 22.4 0.1 8.5e-05 21.7 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.18 gi|84488844|ref|YP_447076.1| - 6.5e-05 22.7 0.0 0.00017 21.4 0.0 1.6 1 1 1 2 2 2 1 Phosphotransferase enzyme family CmcH_NodU PF02543.10 gi|84488844|ref|YP_447076.1| - 0.0028 16.8 0.0 0.0042 16.2 0.0 1.2 1 0 0 1 1 1 1 Carbamoyltransferase EcKinase PF02958.15 gi|84488844|ref|YP_447076.1| - 0.033 13.3 0.0 0.058 12.5 0.0 1.4 1 0 0 1 1 1 0 Ecdysteroid kinase BacA PF02673.13 gi|84488845|ref|YP_447077.1| - 3.4e-81 272.2 17.1 4e-81 272.0 11.8 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA TauE PF01925.14 gi|84488845|ref|YP_447077.1| - 0.00053 19.5 18.8 0.001 18.5 13.0 1.5 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE Pox_A14 PF05767.7 gi|84488845|ref|YP_447077.1| - 0.15 12.0 0.1 0.15 12.0 0.1 3.0 3 0 0 3 3 3 0 Poxvirus virion envelope protein A14 Aminotran_4 PF01063.14 gi|84488846|ref|YP_447078.1| - 1.1e-47 162.5 0.0 1.2e-47 162.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class IV TOM13 PF08219.6 gi|84488847|ref|YP_447079.1| - 4.4 7.1 5.1 1.4 8.7 0.1 2.4 1 1 1 2 2 2 0 Outer membrane protein TOM13 MULE PF10551.4 gi|84488848|ref|YP_447080.1| - 0.0015 18.6 0.1 0.0077 16.3 0.0 2.2 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_IS240 PF13610.1 gi|84488848|ref|YP_447080.1| - 0.002 18.0 2.9 0.002 18.0 2.0 2.7 2 1 0 3 3 3 1 DDE domain Zn-ribbon_8 PF09723.5 gi|84488848|ref|YP_447080.1| - 0.11 12.4 3.0 2.2 8.2 0.2 2.6 2 0 0 2 2 2 0 Zinc ribbon domain Transposase_mut PF00872.13 gi|84488848|ref|YP_447080.1| - 0.26 9.7 6.5 0.15 10.6 2.1 2.2 2 1 0 2 2 2 0 Transposase, Mutator family zf-ISL3 PF14690.1 gi|84488848|ref|YP_447080.1| - 0.39 10.7 13.5 2.4 8.2 9.4 2.3 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|84488848|ref|YP_447080.1| - 1.5 8.6 10.0 4 7.3 7.0 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain HTH_40 PF14493.1 gi|84488848|ref|YP_447080.1| - 3.7 7.8 13.0 2.2 8.5 3.7 3.9 2 1 2 4 4 4 0 Helix-turn-helix domain Thioredoxin_4 PF13462.1 gi|84488848|ref|YP_447080.1| - 3.8 7.4 8.7 0.33 10.9 0.5 2.9 2 1 1 3 3 3 0 Thioredoxin Mrr_cat PF04471.7 gi|84488849|ref|YP_447081.1| - 3.1e-15 55.9 0.2 4.6e-15 55.4 0.1 1.3 1 0 0 1 1 1 1 Restriction endonuclease SurE PF01975.12 gi|84488850|ref|YP_447082.1| - 3.7e-57 192.8 0.6 5.3e-57 192.3 0.4 1.2 1 0 0 1 1 1 1 Survival protein SurE DUF1464 PF07318.7 gi|84488851|ref|YP_447083.1| - 0.018 13.8 3.5 1 8.0 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1464) DUF3980 PF13140.1 gi|84488851|ref|YP_447083.1| - 0.21 11.8 2.4 14 6.0 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) IlvN PF07991.7 gi|84488852|ref|YP_447084.1| - 2.7e-72 241.5 0.5 4.8e-72 240.6 0.3 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|84488852|ref|YP_447084.1| - 1.9e-51 173.7 0.2 3e-51 173.1 0.2 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.10 gi|84488852|ref|YP_447084.1| - 2.5e-06 27.4 0.0 4.5e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|84488852|ref|YP_447084.1| - 1.6e-05 25.1 0.0 5e-05 23.6 0.0 1.8 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|84488852|ref|YP_447084.1| - 3.9e-05 22.8 0.0 6.3e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.16 gi|84488852|ref|YP_447084.1| - 5.8e-05 22.9 0.1 0.00014 21.7 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Leukocidin PF07968.7 gi|84488852|ref|YP_447084.1| - 0.0034 17.0 0.1 0.0065 16.1 0.1 1.4 1 0 0 1 1 1 1 Leukocidin/Hemolysin toxin family PDDEXK_1 PF12705.2 gi|84488854|ref|YP_447086.1| - 4.5e-11 42.6 0.5 5.5e-10 39.0 0.3 2.0 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.12 gi|84488854|ref|YP_447086.1| - 6.2e-11 42.4 1.4 1.4e-10 41.3 0.9 1.5 1 1 0 1 1 1 1 Domain of unknown function DUF83 Exo5 PF09810.4 gi|84488854|ref|YP_447086.1| - 1.5e-08 34.2 6.7 5e-05 22.6 0.2 2.8 1 1 1 2 2 2 2 Exonuclease V - a 5' deoxyribonuclease DUF911 PF06023.7 gi|84488854|ref|YP_447086.1| - 0.016 14.4 0.2 0.06 12.5 0.0 1.8 2 0 0 2 2 2 0 Archaeal protein of unknown function (DUF911) Dna2 PF08696.6 gi|84488854|ref|YP_447086.1| - 0.021 14.1 1.7 1.8 7.8 0.1 2.5 2 1 1 3 3 3 0 DNA replication factor Dna2 Sigma54_DBD PF04552.8 gi|84488854|ref|YP_447086.1| - 0.086 12.3 0.5 4.1 6.9 0.1 2.1 2 0 0 2 2 2 0 Sigma-54, DNA binding domain ALS_ss_C PF10369.4 gi|84488855|ref|YP_447087.1| - 4.8e-32 109.5 1.0 7.6e-30 102.4 0.0 2.1 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|84488855|ref|YP_447087.1| - 2.3e-20 72.1 0.2 4.1e-20 71.3 0.1 1.4 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|84488855|ref|YP_447087.1| - 1.9e-14 52.7 0.1 3.6e-14 51.8 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|84488855|ref|YP_447087.1| - 3.2e-06 27.3 1.0 5.7e-06 26.5 0.7 1.4 1 0 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.7 gi|84488855|ref|YP_447087.1| - 0.0017 18.4 0.7 0.027 14.5 0.0 2.4 1 1 1 2 2 2 1 LOR/SDH bifunctional enzyme conserved region YbbR PF07949.7 gi|84488855|ref|YP_447087.1| - 0.16 12.1 5.6 3.1 8.0 3.0 2.3 1 1 1 2 2 2 0 YbbR-like protein TPP_enzyme_N PF02776.13 gi|84488856|ref|YP_447088.1| - 2.5e-58 196.3 0.0 2e-56 190.1 0.0 2.6 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|84488856|ref|YP_447088.1| - 2.1e-52 176.7 0.7 4.9e-51 172.3 0.0 2.7 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|84488856|ref|YP_447088.1| - 9.7e-47 158.1 0.1 3.7e-46 156.2 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain XFP_N PF09364.5 gi|84488856|ref|YP_447088.1| - 0.034 12.7 0.3 0.3 9.5 0.0 2.3 3 0 0 3 3 3 0 XFP N-terminal domain Hpr_kinase_N PF02603.11 gi|84488856|ref|YP_447088.1| - 0.1 12.3 0.1 5.4 6.7 0.0 2.5 2 0 0 2 2 2 0 HPr Serine kinase N terminus ALS_ss_C PF10369.4 gi|84488858|ref|YP_447090.1| - 4.9e-32 109.4 1.0 7.6e-30 102.4 0.0 2.1 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|84488858|ref|YP_447090.1| - 2.3e-20 72.1 0.2 4.1e-20 71.3 0.1 1.4 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|84488858|ref|YP_447090.1| - 1.9e-14 52.7 0.1 3.6e-14 51.8 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|84488858|ref|YP_447090.1| - 2.6e-06 27.6 0.5 4.8e-06 26.8 0.3 1.4 1 0 0 1 1 1 1 ACT domain Saccharop_dh_N PF04455.7 gi|84488858|ref|YP_447090.1| - 0.0017 18.4 0.7 0.027 14.5 0.0 2.4 1 1 1 2 2 2 1 LOR/SDH bifunctional enzyme conserved region YbbR PF07949.7 gi|84488858|ref|YP_447090.1| - 0.16 12.1 5.6 3.1 8.0 3.0 2.3 1 1 1 2 2 2 0 YbbR-like protein TPP_enzyme_N PF02776.13 gi|84488859|ref|YP_447091.1| - 5e-58 195.4 0.0 2.1e-56 190.1 0.0 2.4 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|84488859|ref|YP_447091.1| - 3.5e-50 169.5 0.1 2.5e-49 166.7 0.0 2.3 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|84488859|ref|YP_447091.1| - 2.2e-44 150.5 0.1 1.2e-43 148.1 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|84488859|ref|YP_447091.1| - 0.033 13.7 0.0 0.091 12.3 0.0 1.8 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DXP_synthase_N PF13292.1 gi|84488859|ref|YP_447091.1| - 0.08 11.8 0.3 2.3 7.0 0.0 2.3 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase GARS_A PF01071.14 gi|84488860|ref|YP_447092.1| - 5.9e-65 218.4 0.9 9.2e-65 217.8 0.1 1.7 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|84488860|ref|YP_447092.1| - 4.6e-32 110.4 0.1 1.1e-31 109.1 0.1 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain ATP-grasp_4 PF13535.1 gi|84488860|ref|YP_447092.1| - 3.6e-16 59.4 0.0 9.5e-16 58.0 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain GARS_C PF02843.11 gi|84488860|ref|YP_447092.1| - 1.6e-15 57.0 0.2 4.1e-15 55.7 0.2 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATPgrasp_Ter PF15632.1 gi|84488860|ref|YP_447092.1| - 4e-08 32.3 0.0 1.7e-07 30.3 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|84488860|ref|YP_447092.1| - 3.6e-05 23.6 0.0 0.00037 20.3 0.0 2.5 2 1 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.1 gi|84488860|ref|YP_447092.1| - 0.0013 17.9 0.0 0.0038 16.3 0.0 1.7 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp CPSase_L_D2 PF02786.12 gi|84488860|ref|YP_447092.1| - 0.003 16.8 0.0 0.0076 15.5 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_2 PF08442.5 gi|84488860|ref|YP_447092.1| - 0.0062 15.9 0.0 0.014 14.7 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain DUF2779 PF11074.3 gi|84488860|ref|YP_447092.1| - 0.01 15.9 0.0 0.027 14.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) ATP-grasp PF02222.17 gi|84488860|ref|YP_447092.1| - 0.059 12.7 0.0 0.19 11.1 0.0 1.9 1 0 0 1 1 1 0 ATP-grasp domain TPR_12 PF13424.1 gi|84488860|ref|YP_447092.1| - 0.21 11.5 1.1 28 4.7 0.0 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat OTCace PF00185.19 gi|84488861|ref|YP_447093.1| - 1.7e-58 196.9 0.4 2.3e-58 196.5 0.3 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|84488861|ref|YP_447093.1| - 2.9e-43 146.9 0.0 4.8e-43 146.2 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PALP PF00291.20 gi|84488861|ref|YP_447093.1| - 0.019 14.2 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme His_biosynth PF00977.16 gi|84488862|ref|YP_447094.1| - 1.3e-82 276.5 0.1 1.5e-82 276.3 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.10 gi|84488862|ref|YP_447094.1| - 9.8e-07 28.2 0.0 0.0034 16.5 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.9 gi|84488862|ref|YP_447094.1| - 2.1e-06 26.9 0.0 0.027 13.5 0.0 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|84488862|ref|YP_447094.1| - 0.00031 19.6 0.0 0.27 10.0 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.16 gi|84488862|ref|YP_447094.1| - 0.00051 19.0 0.0 0.21 10.4 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase TMP-TENI PF02581.12 gi|84488862|ref|YP_447094.1| - 0.0015 17.7 0.1 0.52 9.3 0.0 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI PcrB PF01884.12 gi|84488862|ref|YP_447094.1| - 0.0025 17.1 0.6 0.046 12.9 0.1 2.7 2 1 1 3 3 3 1 PcrB family G3P_antiterm PF04309.7 gi|84488862|ref|YP_447094.1| - 0.0082 15.1 0.2 0.21 10.6 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.20 gi|84488862|ref|YP_447094.1| - 0.02 13.7 0.1 2.7 6.7 0.0 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain DUF561 PF04481.7 gi|84488862|ref|YP_447094.1| - 0.031 13.2 0.2 2.3 7.0 0.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF561) Proteasome PF00227.21 gi|84488863|ref|YP_447095.1| - 1.4e-05 24.4 0.0 6.9e-05 22.2 0.0 2.1 2 0 0 2 2 2 1 Proteasome subunit DUF2121 PF09894.4 gi|84488863|ref|YP_447095.1| - 0.076 12.2 0.2 0.34 10.1 0.0 2.1 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2121) HhH-GPD PF00730.20 gi|84488864|ref|YP_447096.1| - 5e-11 42.8 0.0 7.4e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.7 gi|84488864|ref|YP_447096.1| - 2e-10 40.6 0.3 4.3e-10 39.5 0.2 1.5 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HHH PF00633.18 gi|84488864|ref|YP_447096.1| - 0.00018 20.9 0.0 0.00038 19.9 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif AlkA_N PF06029.6 gi|84488864|ref|YP_447096.1| - 0.024 14.6 0.0 0.044 13.8 0.0 1.3 1 0 0 1 1 1 0 AlkA N-terminal domain Pro_isomerase PF00160.16 gi|84488865|ref|YP_447097.1| - 7.3e-48 162.6 0.3 8.6e-48 162.4 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Helicase_C_2 PF13307.1 gi|84488866|ref|YP_447098.1| - 4.8e-22 78.6 0.8 1.5e-21 77.0 0.0 2.2 3 0 0 3 3 3 1 Helicase C-terminal domain ResIII PF04851.10 gi|84488866|ref|YP_447098.1| - 2.2e-10 40.6 1.4 2.2e-10 40.6 1.0 2.1 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.10 gi|84488866|ref|YP_447098.1| - 3e-10 39.7 2.9 3e-10 39.7 2.0 2.4 3 0 0 3 3 3 1 DEAD_2 DEAD PF00270.24 gi|84488866|ref|YP_447098.1| - 0.00016 21.2 0.4 0.1 12.1 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|84488866|ref|YP_447098.1| - 0.0017 18.1 0.0 0.0073 16.1 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_30 PF13604.1 gi|84488866|ref|YP_447098.1| - 0.0074 15.8 0.1 0.11 12.0 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.9 gi|84488866|ref|YP_447098.1| - 0.023 14.3 0.1 8.2 6.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|84488866|ref|YP_447098.1| - 0.034 13.8 0.0 0.071 12.8 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain PhoH PF02562.11 gi|84488866|ref|YP_447098.1| - 0.091 11.9 0.9 2.4 7.3 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein Aminotran_3 PF00202.16 gi|84488867|ref|YP_447099.1| - 9.7e-106 353.4 0.3 1.2e-105 353.1 0.2 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|84488867|ref|YP_447099.1| - 6.4e-09 35.2 0.0 8.2e-09 34.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|84488867|ref|YP_447099.1| - 2.6e-06 26.7 0.0 8e-06 25.1 0.0 1.7 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|84488867|ref|YP_447099.1| - 9.1e-05 21.3 0.0 0.00031 19.5 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|84488867|ref|YP_447099.1| - 0.0012 18.0 0.0 0.0023 17.1 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|84488867|ref|YP_447099.1| - 0.0013 17.1 0.0 0.002 16.4 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Pox_L3_FP4 PF03339.9 gi|84488867|ref|YP_447099.1| - 0.0044 15.5 0.0 0.0066 14.9 0.0 1.3 1 0 0 1 1 1 1 Poxvirus L3/FP4 protein Amidinotransf PF02274.12 gi|84488867|ref|YP_447099.1| - 0.044 12.8 0.0 0.086 11.9 0.0 1.4 1 0 0 1 1 1 0 Amidinotransferase TP_methylase PF00590.15 gi|84488868|ref|YP_447100.1| - 7e-46 156.5 0.0 8.4e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases ApbA PF02558.11 gi|84488868|ref|YP_447100.1| - 0.0078 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Glycos_transf_1 PF00534.15 gi|84488869|ref|YP_447101.1| - 1e-25 90.1 0.9 1e-25 90.1 0.7 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488869|ref|YP_447101.1| - 2.6e-09 37.3 0.0 4.5e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|84488869|ref|YP_447101.1| - 0.014 15.6 0.0 0.044 14.0 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferases group 1 Glyco_tran_WecB PF03808.8 gi|84488869|ref|YP_447101.1| - 0.034 13.5 0.0 0.13 11.6 0.0 1.9 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family CorA PF01544.13 gi|84488870|ref|YP_447102.1| - 0.0045 16.0 1.2 0.0054 15.8 0.8 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein RuBisCO_small PF00101.15 gi|84488870|ref|YP_447102.1| - 0.076 12.8 0.1 0.11 12.3 0.0 1.4 1 1 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain DUF936 PF06075.7 gi|84488870|ref|YP_447102.1| - 0.14 11.0 0.1 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) eIF-5a PF01287.15 gi|84488870|ref|YP_447102.1| - 0.21 11.5 1.1 0.46 10.4 0.2 1.8 2 0 0 2 2 2 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold YqzH PF14164.1 gi|84488871|ref|YP_447103.1| - 0.1 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 YqzH-like protein ERp29_N PF07912.8 gi|84488871|ref|YP_447103.1| - 0.12 12.3 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 ERp29, N-terminal domain Glyco_tranf_2_3 PF13641.1 gi|84488872|ref|YP_447104.1| - 1.7e-15 57.4 0.0 4e-15 56.2 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.21 gi|84488872|ref|YP_447104.1| - 1e-13 51.2 4.5 1.3e-11 44.4 3.1 2.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.1 gi|84488872|ref|YP_447104.1| - 5.6e-12 45.7 0.2 7.6e-12 45.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.1 gi|84488872|ref|YP_447104.1| - 8.4e-09 34.9 0.0 1.1e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_5 PF13712.1 gi|84488872|ref|YP_447104.1| - 0.0032 16.7 1.2 0.01 15.0 0.6 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family Chlam_PMP PF02415.12 gi|84488873|ref|YP_447105.1| - 9.5e-05 22.4 121.6 0.036 14.3 0.8 19.4 19 1 0 19 19 19 15 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Glycos_transf_1 PF00534.15 gi|84488874|ref|YP_447106.1| - 1.5e-35 122.1 0.0 3e-35 121.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488874|ref|YP_447106.1| - 7.8e-13 48.7 0.0 1.2e-12 48.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|84488874|ref|YP_447106.1| - 9.5e-10 38.6 0.0 2.3e-09 37.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488874|ref|YP_447106.1| - 0.0025 17.5 0.1 0.028 14.1 0.0 2.6 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|84488874|ref|YP_447106.1| - 0.0084 15.9 2.2 0.12 12.2 0.2 3.0 3 1 0 3 3 3 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|84488875|ref|YP_447107.1| - 6.7e-16 58.4 11.0 3.8e-08 33.2 0.7 2.8 3 0 0 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84488875|ref|YP_447107.1| - 5.8e-15 55.7 0.0 1.3e-13 51.2 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|84488875|ref|YP_447107.1| - 2.9e-05 23.8 0.0 4.5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.1 gi|84488875|ref|YP_447107.1| - 0.0036 16.6 0.0 1.5 8.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 21 GlcNAc PF11397.3 gi|84488875|ref|YP_447107.1| - 0.0048 16.0 0.4 0.0086 15.2 0.1 1.5 2 0 0 2 2 2 1 Glycosyltransferase (GlcNAc) MRP-S35 PF10246.4 gi|84488876|ref|YP_447108.1| - 1.8e-07 31.0 0.2 1.3 8.9 0.0 4.2 4 0 0 4 4 4 3 Mitochondrial ribosomal protein MRP-S35 PMBR PF09373.5 gi|84488876|ref|YP_447108.1| - 2.2e-06 27.3 0.4 1.4e-05 24.8 0.1 2.6 2 0 0 2 2 2 1 Pseudomurein-binding repeat DUF1804 PF08822.6 gi|84488876|ref|YP_447108.1| - 0.0009 19.0 0.6 15 5.2 0.0 3.9 3 0 0 3 3 3 3 Protein of unknown function (DUF1804) Membrane_bind PF14564.1 gi|84488876|ref|YP_447108.1| - 0.0058 16.8 49.9 0.42 10.8 0.6 9.2 1 1 9 10 10 10 4 Membrane binding adh_short PF00106.20 gi|84488877|ref|YP_447109.1| - 4e-36 124.4 0.0 5.4e-36 124.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|84488877|ref|YP_447109.1| - 1.7e-28 100.0 0.2 2e-28 99.7 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|84488877|ref|YP_447109.1| - 2.6e-17 63.0 0.0 3.8e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|84488877|ref|YP_447109.1| - 2e-05 24.1 0.1 2.6e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|84488877|ref|YP_447109.1| - 0.00049 19.0 0.1 0.00067 18.6 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|84488877|ref|YP_447109.1| - 0.0025 17.8 0.1 0.0035 17.3 0.1 1.3 1 0 0 1 1 1 1 NADH(P)-binding 3Beta_HSD PF01073.14 gi|84488877|ref|YP_447109.1| - 0.0035 16.0 0.6 0.0051 15.5 0.4 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.14 gi|84488877|ref|YP_447109.1| - 0.0059 15.6 0.0 0.018 14.1 0.0 1.8 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DEAD PF00270.24 gi|84488877|ref|YP_447109.1| - 0.011 15.2 0.0 0.019 14.4 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase 3HCDH_N PF02737.13 gi|84488877|ref|YP_447109.1| - 0.015 14.9 0.1 0.024 14.2 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|84488877|ref|YP_447109.1| - 0.037 13.4 0.0 0.069 12.5 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.15 gi|84488877|ref|YP_447109.1| - 0.071 13.2 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Beta_helix PF13229.1 gi|84488878|ref|YP_447110.1| - 7.9e-09 35.4 41.5 7.9e-09 35.4 28.7 13.4 3 2 10 13 13 13 3 Right handed beta helix region Glycos_transf_1 PF00534.15 gi|84488879|ref|YP_447111.1| - 1.7e-35 121.9 1.0 1.7e-35 121.9 0.7 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Thioredoxin_8 PF13905.1 gi|84488879|ref|YP_447111.1| - 0.00034 20.6 0.3 0.001 19.1 0.1 2.0 2 0 0 2 2 2 1 Thioredoxin-like Glyco_trans_1_2 PF13524.1 gi|84488879|ref|YP_447111.1| - 0.019 15.1 0.0 0.049 13.9 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferases group 1 Fe_hyd_lg_C PF02906.9 gi|84488879|ref|YP_447111.1| - 0.034 13.4 0.1 0.062 12.5 0.1 1.4 1 0 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain PS_pyruv_trans PF04230.8 gi|84488879|ref|YP_447111.1| - 0.06 13.0 2.5 0.33 10.6 0.2 2.4 2 1 0 2 2 2 0 Polysaccharide pyruvyl transferase ASFV_360 PF01671.11 gi|84488879|ref|YP_447111.1| - 0.069 12.5 1.4 0.52 9.6 0.2 2.7 2 1 1 3 3 3 0 African swine fever virus multigene family 360 protein DUF2206 PF09971.4 gi|84488880|ref|YP_447112.1| - 6.8e-35 120.5 29.4 4e-28 98.2 5.4 4.5 2 2 3 5 5 5 2 Predicted membrane protein (DUF2206) DUF1616 PF07760.6 gi|84488880|ref|YP_447112.1| - 2e-30 105.9 24.4 2e-30 105.9 16.9 3.2 3 1 0 4 4 4 1 Protein of unknown function (DUF1616) Glycos_transf_1 PF00534.15 gi|84488881|ref|YP_447113.1| - 7.9e-35 119.7 0.6 2.4e-34 118.2 0.1 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488881|ref|YP_447113.1| - 2.6e-19 69.6 0.0 5.6e-19 68.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|84488881|ref|YP_447113.1| - 8e-08 32.5 0.0 1.1e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|84488881|ref|YP_447113.1| - 6.9e-05 23.0 0.0 0.00017 21.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488881|ref|YP_447113.1| - 0.00013 21.7 0.1 0.0021 17.8 0.0 2.5 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|84488881|ref|YP_447113.1| - 0.0012 18.7 4.8 0.0023 17.7 1.3 2.5 2 1 0 2 2 2 1 Glycosyl transferase 4-like Glycos_transf_1 PF00534.15 gi|84488882|ref|YP_447114.1| - 5.9e-44 149.5 0.2 1.1e-43 148.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488882|ref|YP_447114.1| - 2.4e-18 66.5 0.0 5e-18 65.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488882|ref|YP_447114.1| - 3.6e-15 56.1 0.0 5.5e-15 55.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|84488882|ref|YP_447114.1| - 4.1e-10 39.6 0.8 1.2e-09 38.1 0.6 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|84488882|ref|YP_447114.1| - 1.1e-08 35.3 0.0 1.4e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|84488882|ref|YP_447114.1| - 1.6e-08 34.6 0.0 2.9e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|84488883|ref|YP_447115.1| - 3.1e-36 124.3 0.1 5.7e-36 123.5 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488883|ref|YP_447115.1| - 5.6e-17 62.1 0.0 1.9e-16 60.4 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488883|ref|YP_447115.1| - 3.7e-13 49.5 0.0 6.6e-13 48.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|84488883|ref|YP_447115.1| - 2.9e-09 37.2 0.0 3.8e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|84488883|ref|YP_447115.1| - 0.012 15.8 0.0 0.031 14.5 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 Glycos_transf_2 PF00535.21 gi|84488884|ref|YP_447116.1| - 1.8e-23 83.0 0.0 2.5e-23 82.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84488884|ref|YP_447116.1| - 8.7e-07 28.9 0.0 9.4e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84488884|ref|YP_447116.1| - 0.00015 20.9 0.0 0.00022 20.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Response_reg PF00072.19 gi|84488884|ref|YP_447116.1| - 0.0041 17.0 0.0 0.01 15.8 0.0 1.6 1 1 0 1 1 1 1 Response regulator receiver domain Glyco_trans_1_4 PF13692.1 gi|84488885|ref|YP_447117.1| - 8.4e-23 81.0 0.0 1.3e-22 80.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|84488885|ref|YP_447117.1| - 4.1e-11 42.6 0.3 1.2e-10 41.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|84488885|ref|YP_447117.1| - 3.2e-08 33.7 0.0 6.9e-08 32.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488885|ref|YP_447117.1| - 3.6e-06 26.8 0.5 4.2e-05 23.3 0.4 2.1 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.15 gi|84488886|ref|YP_447118.1| - 7.8e-31 106.7 0.6 1.8e-30 105.5 0.4 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488886|ref|YP_447118.1| - 2.1e-16 60.3 0.0 4.2e-16 59.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488886|ref|YP_447118.1| - 8.5e-15 54.9 0.0 1.6e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|84488886|ref|YP_447118.1| - 4.7e-11 43.0 0.0 1e-10 42.0 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|84488886|ref|YP_447118.1| - 3.9e-07 30.2 0.0 9.2e-07 29.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|84488886|ref|YP_447118.1| - 0.00091 19.0 5.3 0.00092 19.0 1.9 2.2 1 1 1 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.6 gi|84488886|ref|YP_447118.1| - 0.0053 16.2 0.5 0.43 10.0 0.0 2.5 1 1 1 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.15 gi|84488887|ref|YP_447119.1| - 2.5e-20 72.5 0.1 4.6e-20 71.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84488887|ref|YP_447119.1| - 1.8e-13 50.8 0.0 3e-13 50.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|84488887|ref|YP_447119.1| - 1e-09 38.7 0.0 1.4e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|84488887|ref|YP_447119.1| - 4.6e-06 26.5 6.8 4.6e-06 26.5 4.7 3.2 4 1 0 4 4 4 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|84488887|ref|YP_447119.1| - 7.2e-05 22.9 0.0 0.00015 21.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488887|ref|YP_447119.1| - 0.0094 15.6 0.1 0.018 14.7 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 MGDG_synth PF06925.6 gi|84488887|ref|YP_447119.1| - 0.048 13.5 0.4 0.094 12.6 0.3 1.5 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase Epimerase PF01370.16 gi|84488888|ref|YP_447120.1| - 1.1e-49 169.0 0.0 1.3e-49 168.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|84488888|ref|YP_447120.1| - 3.1e-18 65.4 0.0 4.3e-18 65.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|84488888|ref|YP_447120.1| - 8.6e-15 54.3 0.0 4e-13 48.9 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|84488888|ref|YP_447120.1| - 7.8e-11 41.3 0.0 1.1e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|84488888|ref|YP_447120.1| - 1.1e-09 37.6 0.0 2.9e-08 32.9 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.20 gi|84488888|ref|YP_447120.1| - 0.00047 20.1 0.0 0.00088 19.2 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|84488888|ref|YP_447120.1| - 0.00052 20.0 0.0 0.00086 19.3 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 gi|84488888|ref|YP_447120.1| - 0.0017 17.6 0.0 0.0032 16.7 0.0 1.5 1 1 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|84488888|ref|YP_447120.1| - 0.017 14.7 0.0 0.088 12.4 0.0 2.1 1 1 0 1 1 1 0 KR domain TrkA_N PF02254.13 gi|84488888|ref|YP_447120.1| - 0.026 14.5 0.0 0.045 13.7 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Epimerase_Csub PF13950.1 gi|84488888|ref|YP_447120.1| - 0.029 14.3 0.2 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose 4-epimerase C-term subunit ThiF PF00899.16 gi|84488888|ref|YP_447120.1| - 0.17 11.6 0.3 0.57 9.9 0.0 2.0 3 0 0 3 3 3 0 ThiF family Methyltransf_23 PF13489.1 gi|84488889|ref|YP_447121.1| - 6.1e-14 52.0 0.0 7.2e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|84488889|ref|YP_447121.1| - 8e-14 51.2 0.2 9.7e-14 50.9 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_31 PF13847.1 gi|84488889|ref|YP_447121.1| - 2.3e-11 43.5 0.0 2.8e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|84488889|ref|YP_447121.1| - 5.7e-11 42.7 0.0 8.6e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84488889|ref|YP_447121.1| - 3.3e-09 37.3 0.0 4.8e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|84488889|ref|YP_447121.1| - 1.6e-07 31.7 0.1 2.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|84488889|ref|YP_447121.1| - 2.1e-07 31.2 0.0 3e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.6 gi|84488889|ref|YP_447121.1| - 0.0028 17.1 0.0 0.026 13.9 0.0 2.0 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) MTS PF05175.9 gi|84488889|ref|YP_447121.1| - 0.0032 16.8 0.0 0.0043 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.15 gi|84488889|ref|YP_447121.1| - 0.0041 16.2 0.1 0.032 13.3 0.0 1.9 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_26 PF13659.1 gi|84488889|ref|YP_447121.1| - 0.006 16.6 0.0 0.0085 16.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|84488889|ref|YP_447121.1| - 0.055 13.0 0.3 0.094 12.2 0.1 1.5 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NodS PF05401.6 gi|84488889|ref|YP_447121.1| - 0.14 11.4 0.0 0.19 11.1 0.0 1.4 1 1 0 1 1 1 0 Nodulation protein S (NodS) LicD PF04991.8 gi|84488890|ref|YP_447122.1| - 8.2e-42 143.6 8.2 1.1e-41 143.1 5.7 1.2 1 0 0 1 1 1 1 LicD family HTH_5 PF01022.15 gi|84488891|ref|YP_447123.1| - 3.2e-07 29.9 0.2 7.8e-07 28.6 0.2 1.7 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|84488891|ref|YP_447123.1| - 1.4e-06 27.5 0.5 2.7e-06 26.6 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding V4R PF02830.13 gi|84488891|ref|YP_447123.1| - 2.2e-06 27.4 1.1 3.6e-06 26.7 0.7 1.3 1 0 0 1 1 1 1 V4R domain MarR PF01047.17 gi|84488891|ref|YP_447123.1| - 2.5e-05 23.8 0.1 5.2e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|84488891|ref|YP_447123.1| - 0.00064 19.4 0.0 0.0014 18.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sulfolobus_pRN PF05584.6 gi|84488891|ref|YP_447123.1| - 0.001 18.9 0.4 0.0033 17.3 0.0 2.0 2 0 0 2 2 2 1 Sulfolobus plasmid regulatory protein HTH_IclR PF09339.5 gi|84488891|ref|YP_447123.1| - 0.007 15.9 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|84488891|ref|YP_447123.1| - 0.011 15.4 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.1 gi|84488891|ref|YP_447123.1| - 0.03 14.4 0.5 0.087 12.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_27 PF13463.1 gi|84488891|ref|YP_447123.1| - 0.065 13.5 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|84488891|ref|YP_447123.1| - 0.11 12.5 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.14 gi|84488891|ref|YP_447123.1| - 0.12 12.0 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RP-C PF03428.8 gi|84488891|ref|YP_447123.1| - 0.13 11.6 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain Glyco_tranf_2_5 PF13712.1 gi|84488892|ref|YP_447124.1| - 1.5e-32 112.6 1.9 1e-31 109.8 1.3 1.9 1 1 0 1 1 1 1 Glycosyltransferase like family Glycos_transf_2 PF00535.21 gi|84488892|ref|YP_447124.1| - 3.5e-10 39.8 0.5 1.3e-05 24.9 0.0 2.5 1 1 1 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84488892|ref|YP_447124.1| - 0.00032 19.8 1.1 0.00041 19.5 0.1 1.6 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Polysacc_synt PF01943.12 gi|84488893|ref|YP_447125.1| - 2.1e-49 168.2 42.6 2.1e-49 168.2 29.5 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|84488893|ref|YP_447125.1| - 4.6e-21 75.4 29.3 4.6e-21 75.4 20.3 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|84488893|ref|YP_447125.1| - 4.1e-20 72.0 17.1 4.1e-20 72.0 11.8 4.4 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|84488893|ref|YP_447125.1| - 3.4e-09 35.6 45.6 3.4e-09 35.6 31.6 1.8 1 1 1 2 2 2 1 MviN-like protein Hexapep PF00132.19 gi|84488894|ref|YP_447126.1| - 1.5e-12 46.4 10.7 3e-09 35.9 1.6 3.4 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|84488894|ref|YP_447126.1| - 7.3e-06 25.4 7.4 0.00045 19.7 0.2 2.5 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase GnsAB PF08178.6 gi|84488894|ref|YP_447126.1| - 0.14 11.8 0.3 0.25 11.0 0.2 1.4 1 0 0 1 1 1 0 GnsA/GnsB family GLF PF03275.8 gi|84488895|ref|YP_447127.1| - 9e-63 211.4 16.6 1.4e-62 210.8 11.5 1.3 1 0 0 1 1 1 1 UDP-galactopyranose mutase NAD_binding_8 PF13450.1 gi|84488895|ref|YP_447127.1| - 1.3e-17 63.5 0.0 2.5e-17 62.6 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|84488895|ref|YP_447127.1| - 7.3e-06 25.1 0.1 1.2e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|84488895|ref|YP_447127.1| - 1.6e-05 24.8 0.1 6.1e-05 22.9 0.0 2.0 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|84488895|ref|YP_447127.1| - 2e-05 23.8 0.0 0.00066 18.8 0.0 2.4 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.12 gi|84488895|ref|YP_447127.1| - 0.0001 21.5 0.0 0.00019 20.6 0.0 1.4 1 0 0 1 1 1 1 Thi4 family NAD_binding_9 PF13454.1 gi|84488895|ref|YP_447127.1| - 0.00015 21.5 0.0 0.00025 20.8 0.0 1.4 1 0 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox_3 PF13738.1 gi|84488895|ref|YP_447127.1| - 0.0002 21.5 0.0 0.00041 20.4 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|84488895|ref|YP_447127.1| - 0.0004 18.9 0.1 0.0012 17.4 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.22 gi|84488895|ref|YP_447127.1| - 0.00068 19.9 0.1 0.02 15.3 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.13 gi|84488895|ref|YP_447127.1| - 0.0031 17.4 0.1 0.0077 16.2 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain Amino_oxidase PF01593.19 gi|84488895|ref|YP_447127.1| - 0.005 15.9 0.0 0.0073 15.4 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.19 gi|84488895|ref|YP_447127.1| - 0.0094 14.8 0.0 0.014 14.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.7 gi|84488895|ref|YP_447127.1| - 0.013 14.4 0.0 0.025 13.4 0.0 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein GMC_oxred_N PF00732.14 gi|84488895|ref|YP_447127.1| - 0.046 12.8 0.0 0.12 11.4 0.0 1.6 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.17 gi|84488895|ref|YP_447127.1| - 0.058 12.2 0.3 0.21 10.4 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Polysacc_synt PF01943.12 gi|84488896|ref|YP_447128.1| - 3.2e-66 223.4 34.1 3.2e-66 223.4 23.7 2.0 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|84488896|ref|YP_447128.1| - 1.5e-15 57.3 34.7 2.8e-13 49.9 11.3 2.1 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|84488896|ref|YP_447128.1| - 3.1e-05 23.8 10.4 3.1e-05 23.8 7.2 4.3 2 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|84488896|ref|YP_447128.1| - 7.6e-05 21.3 34.7 0.0006 18.3 24.1 2.3 1 1 0 1 1 1 1 MviN-like protein gpUL132 PF11359.3 gi|84488896|ref|YP_447128.1| - 0.2 10.9 0.3 0.82 8.9 0.2 2.0 1 0 0 1 1 1 0 Glycoprotein UL132 Epimerase PF01370.16 gi|84488897|ref|YP_447129.1| - 8.6e-57 192.2 0.0 1e-56 192.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|84488897|ref|YP_447129.1| - 7.2e-26 90.5 0.0 9.7e-26 90.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|84488897|ref|YP_447129.1| - 1.3e-17 63.6 0.0 1.1e-16 60.5 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|84488897|ref|YP_447129.1| - 4.2e-12 45.5 0.2 9e-11 41.1 0.1 2.1 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.12 gi|84488897|ref|YP_447129.1| - 7.4e-10 38.1 0.0 1.2e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|84488897|ref|YP_447129.1| - 2.2e-06 27.8 0.0 2.9e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|84488897|ref|YP_447129.1| - 5.7e-05 23.1 0.1 0.0002 21.2 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase Epimerase_Csub PF13950.1 gi|84488897|ref|YP_447129.1| - 0.00017 21.4 0.0 0.00033 20.5 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit NmrA PF05368.8 gi|84488897|ref|YP_447129.1| - 0.013 14.7 0.1 0.023 13.9 0.1 1.7 1 1 0 1 1 1 0 NmrA-like family TrkA_N PF02254.13 gi|84488897|ref|YP_447129.1| - 0.023 14.6 0.3 0.11 12.4 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain F-112 PF09645.5 gi|84488897|ref|YP_447129.1| - 0.05 13.4 0.2 0.14 12.0 0.0 1.8 2 0 0 2 2 2 0 F-112 protein ThiF PF00899.16 gi|84488897|ref|YP_447129.1| - 0.062 13.1 0.2 0.27 11.0 0.0 2.2 1 1 2 3 3 3 0 ThiF family KR PF08659.5 gi|84488897|ref|YP_447129.1| - 0.17 11.5 0.0 0.45 10.1 0.0 1.7 2 0 0 2 2 2 0 KR domain DUF1616 PF07760.6 gi|84488898|ref|YP_447130.1| - 7.6e-23 81.0 7.5 9.1e-23 80.7 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) NdhL PF10716.4 gi|84488898|ref|YP_447130.1| - 0.26 11.0 1.2 0.44 10.3 0.8 1.3 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit HAD PF12710.2 gi|84488899|ref|YP_447131.1| - 1.1e-05 25.7 0.2 3e-05 24.2 0.0 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.11 gi|84488899|ref|YP_447131.1| - 0.0043 15.9 0.0 0.0078 15.1 0.0 1.4 1 0 0 1 1 1 1 Trehalose-phosphatase DUF4377 PF14302.1 gi|84488899|ref|YP_447131.1| - 0.025 14.4 0.4 0.081 12.8 0.3 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4377) HAD_2 PF13419.1 gi|84488899|ref|YP_447131.1| - 0.13 12.4 0.0 1.7 8.8 0.0 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF2683 PF10884.3 gi|84488899|ref|YP_447131.1| - 0.49 10.3 4.5 0.46 10.4 1.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) FTR_C PF02741.10 gi|84488900|ref|YP_447132.1| - 4.8e-57 191.9 0.0 7.5e-57 191.3 0.0 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.13 gi|84488900|ref|YP_447132.1| - 1.5e-46 157.7 0.1 2e-46 157.2 0.1 1.2 1 0 0 1 1 1 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase PfkB PF00294.19 gi|84488901|ref|YP_447133.1| - 1.4e-54 185.3 0.1 1.6e-54 185.1 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Flg_bbr_C PF06429.8 gi|84488901|ref|YP_447133.1| - 0.037 13.9 0.0 0.093 12.6 0.0 1.7 1 0 0 1 1 1 0 Flagellar basal body rod FlgEFG protein C-terminal SOR_SNZ PF01680.12 gi|84488902|ref|YP_447134.1| - 5.8e-108 359.2 9.4 7.6e-108 358.8 6.5 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|84488902|ref|YP_447134.1| - 5.1e-09 35.5 5.7 5e-07 29.0 0.3 2.3 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|84488902|ref|YP_447134.1| - 0.00046 19.1 0.2 0.05 12.4 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|84488902|ref|YP_447134.1| - 0.0014 17.8 2.5 0.0022 17.2 0.1 2.1 2 0 0 2 2 2 1 Nitronate monooxygenase NanE PF04131.9 gi|84488902|ref|YP_447134.1| - 0.0023 16.9 1.5 0.053 12.4 0.0 2.7 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.16 gi|84488902|ref|YP_447134.1| - 0.0026 16.8 0.1 0.012 14.6 0.0 2.0 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.16 gi|84488902|ref|YP_447134.1| - 0.0036 16.5 0.4 0.018 14.3 0.0 2.3 2 1 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|84488902|ref|YP_447134.1| - 0.013 14.7 0.1 0.036 13.3 0.0 1.7 1 0 0 1 1 1 0 PcrB family ExoD PF06055.7 gi|84488903|ref|YP_447135.1| - 8.5e-44 148.9 3.9 9.8e-44 148.6 2.7 1.0 1 0 0 1 1 1 1 Exopolysaccharide synthesis, ExoD Malate_synthase PF01274.17 gi|84488903|ref|YP_447135.1| - 0.12 10.3 0.0 0.13 10.2 0.0 1.1 1 0 0 1 1 1 0 Malate synthase NUDIX PF00293.23 gi|84488904|ref|YP_447136.1| - 5.1e-06 26.1 0.0 1.3e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 NUDIX domain Anophelin PF10731.4 gi|84488905|ref|YP_447137.1| - 0.0063 16.5 1.3 0.53 10.4 0.0 2.9 3 0 0 3 3 3 1 Thrombin inhibitor from mosquito CD99L2 PF12301.3 gi|84488905|ref|YP_447137.1| - 0.21 11.2 0.1 0.21 11.2 0.1 2.3 2 1 0 2 2 2 0 CD99 antigen like protein 2 DUF1759 PF03564.10 gi|84488905|ref|YP_447137.1| - 0.5 10.1 12.1 0.42 10.4 2.5 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF1759) tRNA_anti-like PF12869.2 gi|84488905|ref|YP_447137.1| - 0.83 9.1 7.7 2.6 7.5 5.3 2.1 1 1 0 1 1 1 0 tRNA_anti-like FliP PF00813.15 gi|84488905|ref|YP_447137.1| - 1.9 8.1 5.1 0.97 9.1 0.7 2.0 1 1 0 2 2 2 0 FliP family DUF3139 PF11337.3 gi|84488905|ref|YP_447137.1| - 3.7 7.8 6.9 0.68 10.2 0.5 2.7 2 1 0 3 3 3 0 Protein of unknown function (DUF3139) Methyltransf_30 PF05430.6 gi|84488906|ref|YP_447138.1| - 1e-26 93.0 0.0 1.8e-26 92.2 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_18 PF12847.2 gi|84488906|ref|YP_447138.1| - 0.00081 19.9 0.0 0.0022 18.5 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Spermine_synth PF01564.12 gi|84488906|ref|YP_447138.1| - 0.0015 17.5 0.0 0.0027 16.6 0.0 1.4 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_31 PF13847.1 gi|84488906|ref|YP_447138.1| - 0.0029 17.2 0.3 0.012 15.2 0.2 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|84488906|ref|YP_447138.1| - 0.012 15.6 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.1 gi|84488906|ref|YP_447138.1| - 0.015 15.6 0.0 0.043 14.1 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.1 gi|84488906|ref|YP_447138.1| - 0.13 11.9 0.0 0.34 10.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain DUF3321 PF11968.3 gi|84488907|ref|YP_447139.1| - 0.031 13.8 0.5 0.049 13.2 0.4 1.4 1 1 0 1 1 1 0 Putative methyltransferase (DUF3321) PsbH PF00737.15 gi|84488908|ref|YP_447140.1| - 0.09 12.3 1.0 0.17 11.4 0.7 1.4 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein HmuY PF14064.1 gi|84488908|ref|YP_447140.1| - 0.09 12.7 0.7 0.11 12.4 0.5 1.1 1 0 0 1 1 1 0 HmuY protein Class_IIIsignal PF04021.7 gi|84488908|ref|YP_447140.1| - 0.19 11.4 6.6 3.4 7.5 4.6 2.3 1 1 0 1 1 1 0 Class III signal peptide TadE PF07811.7 gi|84488908|ref|YP_447140.1| - 0.22 11.4 2.8 0.32 10.9 1.9 1.3 1 0 0 1 1 1 0 TadE-like protein Class_IIIsignal PF04021.7 gi|84488909|ref|YP_447141.1| - 9.7e-08 31.4 0.7 1.7e-07 30.6 0.5 1.4 1 0 0 1 1 1 1 Class III signal peptide Glycos_transf_4 PF00953.16 gi|84488910|ref|YP_447142.1| - 5.9e-29 100.9 20.6 5.9e-29 100.9 14.3 2.3 2 1 0 2 2 2 1 Glycosyl transferase family 4 DUF1469 PF07332.6 gi|84488910|ref|YP_447142.1| - 8.9 6.0 16.2 5.2 6.8 2.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1469) HTH_23 PF13384.1 gi|84488911|ref|YP_447143.1| - 2.4e-12 46.0 0.0 4.9e-05 22.8 0.0 2.6 2 0 0 2 2 2 2 Homeodomain-like domain HTH_7 PF02796.10 gi|84488911|ref|YP_447143.1| - 2e-11 43.5 3.5 8.4e-06 25.5 0.0 2.7 3 0 0 3 3 2 2 Helix-turn-helix domain of resolvase Terminase_5 PF06056.7 gi|84488911|ref|YP_447143.1| - 3.2e-08 33.0 0.0 0.0013 18.2 0.0 2.3 2 0 0 2 2 2 2 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.1 gi|84488911|ref|YP_447143.1| - 4.6e-08 32.9 0.0 0.031 14.2 0.0 3.2 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_38 PF13936.1 gi|84488911|ref|YP_447143.1| - 2.8e-07 29.9 0.1 0.0024 17.4 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_29 PF13551.1 gi|84488911|ref|YP_447143.1| - 3.8e-07 30.2 0.0 0.22 11.6 0.0 3.1 1 1 2 3 3 3 3 Winged helix-turn helix GerE PF00196.14 gi|84488911|ref|YP_447143.1| - 7.8e-06 25.1 0.1 0.0048 16.1 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family CENP-B_N PF04218.8 gi|84488911|ref|YP_447143.1| - 1e-05 24.8 0.9 0.068 12.6 0.1 2.5 2 0 0 2 2 2 2 CENP-B N-terminal DNA-binding domain HTH_30 PF13556.1 gi|84488911|ref|YP_447143.1| - 2.3e-05 23.8 0.0 0.00022 20.7 0.0 2.2 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|84488911|ref|YP_447143.1| - 3.5e-05 23.1 0.0 0.16 11.4 0.0 2.5 2 0 0 2 2 2 2 Sigma-70, region 4 PAX PF00292.13 gi|84488911|ref|YP_447143.1| - 6.7e-05 22.6 0.0 0.26 11.0 0.0 2.3 1 1 1 2 2 2 2 'Paired box' domain HTH_17 PF12728.2 gi|84488911|ref|YP_447143.1| - 6.8e-05 23.0 0.3 0.028 14.6 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|84488911|ref|YP_447143.1| - 0.00015 21.1 0.1 0.49 9.8 0.0 3.4 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_Tnp_1 PF01527.15 gi|84488911|ref|YP_447143.1| - 0.00082 19.2 0.0 0.043 13.7 0.0 2.2 1 1 1 2 2 2 1 Transposase HTH_Tnp_IS630 PF01710.11 gi|84488911|ref|YP_447143.1| - 0.0014 18.3 0.1 0.095 12.3 0.0 2.5 2 1 1 3 3 3 1 Transposase HTH_11 PF08279.7 gi|84488911|ref|YP_447143.1| - 0.0015 18.1 0.1 1.8 8.2 0.0 3.7 3 1 0 3 3 3 1 HTH domain TrmB PF01978.14 gi|84488911|ref|YP_447143.1| - 0.0021 17.7 0.2 1.2 8.9 0.1 2.7 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_8 PF02954.14 gi|84488911|ref|YP_447143.1| - 0.0027 17.1 0.1 1.6 8.3 0.0 2.8 3 0 0 3 3 2 1 Bacterial regulatory protein, Fis family HTH_Tnp_IS1 PF12759.2 gi|84488911|ref|YP_447143.1| - 0.0033 16.8 0.0 0.39 10.1 0.0 2.4 2 0 0 2 2 2 1 InsA C-terminal domain HTH_20 PF12840.2 gi|84488911|ref|YP_447143.1| - 0.0051 16.5 0.0 0.68 9.7 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain Rep_fac_C PF08542.6 gi|84488911|ref|YP_447143.1| - 0.0094 15.9 0.1 0.88 9.5 0.0 2.4 1 1 1 2 2 2 1 Replication factor C C-terminal domain HTH_22 PF13309.1 gi|84488911|ref|YP_447143.1| - 0.012 15.3 0.9 0.4 10.4 0.0 3.1 2 1 0 2 2 2 0 HTH domain Phage_term_sma PF07141.6 gi|84488911|ref|YP_447143.1| - 0.016 14.7 0.1 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Putative bacteriophage terminase small subunit DUF1699 PF08004.6 gi|84488911|ref|YP_447143.1| - 0.02 14.4 0.3 0.19 11.2 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1699) HTH_40 PF14493.1 gi|84488911|ref|YP_447143.1| - 0.025 14.7 0.1 0.31 11.2 0.0 2.4 1 1 2 3 3 3 0 Helix-turn-helix domain MerR PF00376.18 gi|84488911|ref|YP_447143.1| - 0.027 14.0 0.0 8.6 6.0 0.0 2.7 2 0 0 2 2 2 0 MerR family regulatory protein HTH_Tnp_ISL3 PF13542.1 gi|84488911|ref|YP_447143.1| - 0.045 12.9 0.0 1.2 8.3 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 CPSase_L_D3 PF02787.14 gi|84488911|ref|YP_447143.1| - 0.098 12.4 0.1 2.1 8.1 0.0 2.1 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF530 PF04409.7 gi|84488912|ref|YP_447144.1| - 1e-208 693.6 35.6 1.2e-208 693.4 24.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF530) DUF3725 PF12523.3 gi|84488912|ref|YP_447144.1| - 0.44 10.6 5.1 1.3 9.1 0.1 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3725) tRNA-synt_1g PF09334.6 gi|84488913|ref|YP_447145.1| - 9.5e-156 518.3 0.6 1.3e-155 517.9 0.4 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.15 gi|84488913|ref|YP_447145.1| - 1.4e-23 82.5 1.2 2.9e-23 81.4 0.5 1.8 2 0 0 2 2 2 1 Putative tRNA binding domain tRNA-synt_1 PF00133.17 gi|84488913|ref|YP_447145.1| - 1.1e-21 76.4 4.8 5.1e-08 31.3 0.0 3.9 2 2 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 gi|84488913|ref|YP_447145.1| - 7.5e-13 48.2 1.1 3.1e-05 23.2 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|84488913|ref|YP_447145.1| - 5.2e-05 22.0 0.1 0.00028 19.6 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (K) Anticodon_1 PF08264.8 gi|84488913|ref|YP_447145.1| - 0.00044 20.0 0.2 0.001 18.8 0.1 1.8 1 1 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1d PF00750.14 gi|84488913|ref|YP_447145.1| - 0.012 14.4 3.9 0.34 9.6 0.0 3.2 3 1 1 4 4 4 0 tRNA synthetases class I (R) zf-C3HC4_3 PF13920.1 gi|84488913|ref|YP_447145.1| - 0.075 12.7 6.6 0.6 9.8 0.3 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DALR_1 PF05746.10 gi|84488913|ref|YP_447145.1| - 0.1 12.5 0.0 0.3 11.0 0.0 1.8 1 0 0 1 1 1 0 DALR anticodon binding domain DZR PF12773.2 gi|84488913|ref|YP_447145.1| - 0.11 12.3 8.6 1.5 8.7 5.9 2.2 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.14 gi|84488913|ref|YP_447145.1| - 2.4 7.8 5.7 3.8 7.2 0.6 2.4 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DNA_primase_lrg PF04104.9 gi|84488914|ref|YP_447146.1| - 7.7e-17 61.4 0.7 2.1e-16 59.9 0.0 2.0 2 1 0 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit PilJ PF13675.1 gi|84488914|ref|YP_447146.1| - 0.11 12.7 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term DNA_primase_S PF01896.14 gi|84488915|ref|YP_447147.1| - 2.9e-12 46.5 0.1 4.5e-12 45.9 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase small subunit zf-AD PF07776.10 gi|84488915|ref|YP_447147.1| - 0.036 14.0 0.1 0.084 12.8 0.1 1.6 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) tRNA_NucTransf2 PF09249.6 gi|84488916|ref|YP_447148.1| - 7e-45 151.5 0.3 1.8e-44 150.2 0.2 1.7 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|84488916|ref|YP_447148.1| - 3.7e-09 36.8 0.1 1.4e-08 34.9 0.1 2.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain Methyltransf_18 PF12847.2 gi|84488917|ref|YP_447149.1| - 5.6e-13 49.4 0.0 7.8e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|84488917|ref|YP_447149.1| - 2.5e-12 46.6 0.1 5.7e-12 45.4 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84488917|ref|YP_447149.1| - 2.6e-10 39.9 0.0 4.4e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.5 gi|84488917|ref|YP_447149.1| - 3.1e-09 36.6 0.1 5.8e-09 35.7 0.0 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.15 gi|84488917|ref|YP_447149.1| - 1.7e-08 33.8 0.0 2.2e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|84488917|ref|YP_447149.1| - 2.3e-08 34.0 0.0 2.7e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|84488917|ref|YP_447149.1| - 3.1e-08 33.4 0.0 3.5e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein UPF0020 PF01170.13 gi|84488917|ref|YP_447149.1| - 1.4e-07 31.2 0.0 2e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|84488917|ref|YP_447149.1| - 5.4e-07 29.0 0.1 7.3e-07 28.6 0.0 1.3 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.10 gi|84488917|ref|YP_447149.1| - 9.4e-07 28.3 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.7 gi|84488917|ref|YP_447149.1| - 1.1e-06 29.0 0.0 2.6e-06 27.8 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain DUF633 PF04816.7 gi|84488917|ref|YP_447149.1| - 2e-06 27.3 0.2 2.9e-06 26.7 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF633) PCMT PF01135.14 gi|84488917|ref|YP_447149.1| - 7.2e-06 25.6 0.1 9e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.15 gi|84488917|ref|YP_447149.1| - 1.9e-05 23.9 0.1 2.7e-05 23.4 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.7 gi|84488917|ref|YP_447149.1| - 2.4e-05 24.7 0.1 3.9e-05 24.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|84488917|ref|YP_447149.1| - 5.1e-05 23.0 0.0 6.5e-05 22.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.1 gi|84488917|ref|YP_447149.1| - 5.8e-05 22.8 0.0 6.7e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|84488917|ref|YP_447149.1| - 6.4e-05 22.1 0.1 7.3e-05 21.9 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|84488917|ref|YP_447149.1| - 7.2e-05 23.0 0.0 0.00011 22.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.12 gi|84488917|ref|YP_447149.1| - 0.00018 20.6 0.1 0.00048 19.2 0.0 1.6 2 0 0 2 2 2 1 O-methyltransferase MethyltransfD12 PF02086.10 gi|84488917|ref|YP_447149.1| - 0.00019 21.0 0.0 0.00024 20.6 0.0 1.1 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_4 PF02390.12 gi|84488917|ref|YP_447149.1| - 0.00057 18.9 0.0 0.0011 18.0 0.0 1.4 2 0 0 2 2 2 1 Putative methyltransferase DOT1 PF08123.8 gi|84488917|ref|YP_447149.1| - 0.00079 18.7 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 Histone methylation protein DOT1 NodS PF05401.6 gi|84488917|ref|YP_447149.1| - 0.0013 18.1 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) TehB PF03848.9 gi|84488917|ref|YP_447149.1| - 0.0034 16.5 0.0 0.0044 16.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_5 PF01795.14 gi|84488917|ref|YP_447149.1| - 0.0049 16.1 0.1 0.006 15.8 0.0 1.4 1 1 0 1 1 1 1 MraW methylase family rRNA_methylase PF06962.7 gi|84488917|ref|YP_447149.1| - 0.0068 16.1 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 Putative rRNA methylase Methyltransf_24 PF13578.1 gi|84488917|ref|YP_447149.1| - 0.0075 17.0 0.0 0.011 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FmrO PF07091.6 gi|84488917|ref|YP_447149.1| - 0.012 14.6 0.0 0.016 14.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) tRNA_U5-meth_tr PF05958.6 gi|84488917|ref|YP_447149.1| - 0.012 14.2 0.0 0.015 13.9 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_8 PF05148.10 gi|84488917|ref|YP_447149.1| - 0.028 14.0 0.0 0.05 13.2 0.0 1.4 2 0 0 2 2 2 0 Hypothetical methyltransferase FtsJ PF01728.14 gi|84488917|ref|YP_447149.1| - 0.036 14.0 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Flavoprotein PF02441.14 gi|84488918|ref|YP_447150.1| - 1.9e-30 105.1 0.0 2.7e-30 104.6 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein DUF4251 PF14059.1 gi|84488918|ref|YP_447150.1| - 0.051 13.3 0.0 0.078 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) LigT_PEase PF02834.11 gi|84488919|ref|YP_447151.1| - 7.2e-29 99.6 0.0 9.7e-14 51.1 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase AKAP7_NLS PF10469.4 gi|84488919|ref|YP_447151.1| - 4.9e-14 52.5 3.9 6e-14 52.2 2.7 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.1 gi|84488919|ref|YP_447151.1| - 4.8e-13 49.0 0.0 5.8e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily CPDase PF07823.6 gi|84488919|ref|YP_447151.1| - 0.011 15.2 0.2 0.2 11.0 0.0 2.1 2 0 0 2 2 2 0 Cyclic phosphodiesterase-like protein HVSL PF09749.4 gi|84488919|ref|YP_447151.1| - 0.033 13.1 1.6 0.47 9.4 1.0 1.9 1 1 0 1 1 1 0 Uncharacterised conserved protein DHQS PF01959.11 gi|84488920|ref|YP_447152.1| - 8.1e-150 498.4 4.7 9.1e-150 498.2 3.3 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) Hint PF01079.15 gi|84488920|ref|YP_447152.1| - 0.00057 19.1 0.1 0.29 10.3 0.0 2.7 3 0 0 3 3 3 2 Hint module DUF2577 PF10844.3 gi|84488920|ref|YP_447152.1| - 0.17 11.9 1.8 4.8 7.2 0.0 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF2577) DeoC PF01791.4 gi|84488921|ref|YP_447153.1| - 7.3e-55 185.8 0.0 8.5e-55 185.6 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.19 gi|84488921|ref|YP_447153.1| - 0.00013 21.4 0.0 0.00022 20.6 0.0 1.3 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PEP_mutase PF13714.1 gi|84488921|ref|YP_447153.1| - 0.047 12.9 0.0 6.8 5.8 0.0 2.6 1 1 2 3 3 3 0 Phosphoenolpyruvate phosphomutase Methyltransf_31 PF13847.1 gi|84488922|ref|YP_447154.1| - 8.4e-08 31.9 0.0 9.8e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.1 gi|84488922|ref|YP_447154.1| - 9.5e-07 29.6 0.0 1.3e-06 29.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84488922|ref|YP_447154.1| - 9.9e-06 26.1 0.0 1.2e-05 25.8 0.0 1.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_5 PF01795.14 gi|84488922|ref|YP_447154.1| - 0.0034 16.7 0.0 0.0045 16.3 0.0 1.1 1 0 0 1 1 1 1 MraW methylase family Methyltransf_12 PF08242.7 gi|84488922|ref|YP_447154.1| - 0.005 17.2 0.0 0.007 16.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|84488922|ref|YP_447154.1| - 0.049 13.9 0.0 0.063 13.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Fibrillarin PF01269.12 gi|84488922|ref|YP_447154.1| - 0.05 12.5 0.0 0.063 12.1 0.0 1.1 1 0 0 1 1 1 0 Fibrillarin Methyltransf_23 PF13489.1 gi|84488922|ref|YP_447154.1| - 0.056 13.1 0.0 0.081 12.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|84488922|ref|YP_447154.1| - 0.065 12.6 0.0 0.086 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain NodS PF05401.6 gi|84488922|ref|YP_447154.1| - 0.081 12.3 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) HI0933_like PF03486.9 gi|84488923|ref|YP_447155.1| - 2.8e-102 342.2 0.7 3.1e-102 342.1 0.5 1.0 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_3 PF13738.1 gi|84488923|ref|YP_447155.1| - 2.6e-10 40.6 0.5 5e-09 36.5 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.9 gi|84488923|ref|YP_447155.1| - 0.018 14.9 3.0 0.082 12.7 1.0 2.6 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|84488923|ref|YP_447155.1| - 0.047 12.7 1.1 5.9 5.9 0.1 2.6 2 0 0 2 2 2 0 Thi4 family FAD_binding_2 PF00890.19 gi|84488923|ref|YP_447155.1| - 0.07 11.9 0.0 2.1 7.1 0.0 2.3 3 0 0 3 3 3 0 FAD binding domain DUF77 PF01910.12 gi|84488923|ref|YP_447155.1| - 0.085 12.5 0.0 0.22 11.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF77 Pyr_redox PF00070.22 gi|84488923|ref|YP_447155.1| - 2.3 8.6 5.4 47 4.4 0.1 3.7 3 1 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DUF357 PF04010.8 gi|84488924|ref|YP_447156.1| - 4.6e-22 77.5 0.6 5.1e-22 77.3 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) ThylakoidFormat PF11264.3 gi|84488924|ref|YP_447156.1| - 0.1 12.1 0.5 0.14 11.8 0.3 1.1 1 0 0 1 1 1 0 Thylakoid formation protein CDP-OH_P_transf PF01066.16 gi|84488925|ref|YP_447157.1| - 7.2e-17 61.5 9.7 2.6e-16 59.7 6.7 1.8 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase Claudin_2 PF13903.1 gi|84488925|ref|YP_447157.1| - 7.4 6.2 7.6 16 5.1 0.2 2.2 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Sua5_yciO_yrdC PF01300.13 gi|84488926|ref|YP_447158.1| - 1.5e-50 170.8 0.5 1.8e-50 170.6 0.3 1.0 1 0 0 1 1 1 1 Telomere recombination DUF2098 PF09871.4 gi|84488927|ref|YP_447159.1| - 3.7e-28 97.2 4.1 4.2e-28 97.1 2.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) YdfZ PF14001.1 gi|84488927|ref|YP_447159.1| - 0.063 13.5 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 YdfZ protein HAS-barrel PF09378.5 gi|84488927|ref|YP_447159.1| - 0.13 12.1 0.3 0.25 11.2 0.2 1.7 1 1 0 1 1 1 0 HAS barrel domain SMC_Nse1 PF07574.8 gi|84488928|ref|YP_447160.1| - 0.0052 16.4 2.6 0.0052 16.4 1.8 1.3 1 1 0 1 1 1 1 Nse1 non-SMC component of SMC5-6 complex Exonuc_VII_L PF02601.10 gi|84488928|ref|YP_447160.1| - 0.47 9.5 10.9 0.6 9.2 7.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fasciclin PF02469.17 gi|84488928|ref|YP_447160.1| - 0.48 10.4 2.8 0.64 10.0 1.9 1.2 1 0 0 1 1 1 0 Fasciclin domain DUF2317 PF10079.4 gi|84488928|ref|YP_447160.1| - 0.55 8.7 7.0 0.61 8.6 4.9 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2317) FokI_N PF02981.10 gi|84488928|ref|YP_447160.1| - 0.98 9.0 3.5 0.21 11.1 0.4 1.4 2 0 0 2 2 2 0 Restriction endonuclease FokI, recognition domain DUF2115 PF09888.4 gi|84488929|ref|YP_447161.1| - 1.2e-43 148.9 4.2 1.5e-43 148.7 2.9 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) SspB PF04386.8 gi|84488929|ref|YP_447161.1| - 0.014 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Stringent starvation protein B DUF2624 PF11116.3 gi|84488929|ref|YP_447161.1| - 0.064 13.7 1.3 1.3 9.5 0.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2624) DnaB_2 PF07261.6 gi|84488929|ref|YP_447161.1| - 0.16 11.6 2.1 2.3 7.8 0.0 2.5 2 1 0 2 2 2 0 Replication initiation and membrane attachment Mitofilin PF09731.4 gi|84488929|ref|YP_447161.1| - 0.2 10.2 1.8 0.25 9.9 1.2 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DEAD PF00270.24 gi|84488930|ref|YP_447162.1| - 6.1e-18 64.8 0.0 3.5e-17 62.3 0.0 2.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|84488930|ref|YP_447162.1| - 2.3e-08 34.0 0.0 5.3e-05 23.1 0.0 3.6 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_2 PF12826.2 gi|84488930|ref|YP_447162.1| - 3.4e-08 33.2 0.0 1.1e-06 28.4 0.0 2.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif Helicase_C PF00271.26 gi|84488930|ref|YP_447162.1| - 9.4e-08 31.8 0.0 3.7e-07 29.9 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HHH_5 PF14520.1 gi|84488930|ref|YP_447162.1| - 5.3e-05 23.3 0.1 0.00029 20.9 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.18 gi|84488930|ref|YP_447162.1| - 0.00024 20.6 0.0 0.00087 18.8 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|84488930|ref|YP_447162.1| - 0.0017 18.2 0.1 0.0052 16.7 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF520 PF04461.8 gi|84488930|ref|YP_447162.1| - 0.0028 17.5 0.1 0.0075 16.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF520) MAF_flag10 PF01973.13 gi|84488930|ref|YP_447162.1| - 0.0095 15.4 0.0 0.081 12.4 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function DUF115 PhoH PF02562.11 gi|84488930|ref|YP_447162.1| - 0.026 13.7 0.0 0.12 11.5 0.0 2.2 2 1 0 2 2 2 0 PhoH-like protein DASH_Ask1 PF08655.5 gi|84488930|ref|YP_447162.1| - 0.35 10.7 2.6 20 5.0 0.1 3.3 4 0 0 4 4 4 0 DASH complex subunit Ask1 Glycos_transf_1 PF00534.15 gi|84488931|ref|YP_447163.1| - 3.2e-37 127.5 2.1 9.8e-37 126.0 0.5 2.2 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84488931|ref|YP_447163.1| - 1.9e-16 60.3 0.0 2.6e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|84488931|ref|YP_447163.1| - 5.6e-14 52.4 0.0 1.3e-13 51.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|84488931|ref|YP_447163.1| - 1e-13 51.3 2.8 1e-13 51.3 2.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|84488931|ref|YP_447163.1| - 6e-11 42.4 0.0 1.4e-10 41.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|84488931|ref|YP_447163.1| - 3e-08 33.9 0.0 4.3e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.6 gi|84488931|ref|YP_447163.1| - 0.038 13.4 0.1 0.18 11.2 0.0 1.8 1 1 0 2 2 2 0 Starch synthase catalytic domain CW_binding_2 PF04122.7 gi|84488931|ref|YP_447163.1| - 0.042 14.0 0.1 0.18 12.0 0.1 2.2 1 1 0 1 1 1 0 Putative cell wall binding repeat 2 PhdYeFM_antitox PF02604.14 gi|84488931|ref|YP_447163.1| - 0.046 13.3 0.0 0.17 11.5 0.0 1.9 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF3880 PF12996.2 gi|84488931|ref|YP_447163.1| - 0.096 12.6 0.1 7.4 6.5 0.0 2.7 2 0 0 2 2 2 0 DUF based on E. rectale Gene description (DUF3880) CbiD PF01888.12 gi|84488932|ref|YP_447164.1| - 9.6e-97 323.0 4.3 1.2e-96 322.6 3.0 1.1 1 0 0 1 1 1 1 CbiD HiaBD2 PF15403.1 gi|84488932|ref|YP_447164.1| - 0.016 15.3 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 HiaBD2_N domain of Trimeric autotransporter adhesin (GIN) DLD PF14878.1 gi|84488932|ref|YP_447164.1| - 0.017 15.2 0.0 0.04 14.0 0.0 1.6 1 1 0 1 1 1 0 Death-like domain of SPT6 DUF3042 PF11240.3 gi|84488932|ref|YP_447164.1| - 4 7.3 7.0 2 8.2 0.2 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3042) Thioredoxin_3 PF13192.1 gi|84488933|ref|YP_447165.1| - 3.7e-20 71.4 0.8 4.1e-20 71.3 0.5 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|84488933|ref|YP_447165.1| - 1.8e-10 40.6 0.1 3.2e-10 39.8 0.1 1.4 1 0 0 1 1 1 1 Glutaredoxin DSBA PF01323.15 gi|84488933|ref|YP_447165.1| - 2e-07 30.7 0.2 0.00014 21.4 0.0 2.0 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin PF00085.15 gi|84488933|ref|YP_447165.1| - 3.1e-06 26.8 0.1 3.8e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.1 gi|84488933|ref|YP_447165.1| - 1.2e-05 25.4 0.9 0.023 14.6 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.1 gi|84488933|ref|YP_447165.1| - 0.0016 18.5 0.4 0.027 14.6 0.2 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain DUF1223 PF06764.6 gi|84488933|ref|YP_447165.1| - 0.061 13.1 0.3 0.25 11.1 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1223) Thioredoxin_9 PF14595.1 gi|84488933|ref|YP_447165.1| - 0.099 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin PLDc PF00614.17 gi|84488933|ref|YP_447165.1| - 0.14 11.9 0.5 0.24 11.2 0.3 1.3 1 0 0 1 1 1 0 Phospholipase D Active site motif GHMP_kinases_N PF00288.21 gi|84488934|ref|YP_447166.1| - 9.5e-13 48.0 0.4 9.5e-13 48.0 0.3 2.2 3 0 0 3 3 3 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|84488934|ref|YP_447166.1| - 0.0098 16.0 0.1 0.022 14.9 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal Toxin_63 PF15541.1 gi|84488934|ref|YP_447166.1| - 0.04 13.8 0.0 0.082 12.8 0.0 1.5 1 0 0 1 1 1 0 Putative toxin 63 Dev_Cell_Death PF10539.4 gi|84488934|ref|YP_447166.1| - 0.051 13.1 0.0 0.093 12.2 0.0 1.4 1 0 0 1 1 1 0 Development and cell death domain CM_2 PF01817.16 gi|84488935|ref|YP_447167.1| - 6.5e-14 51.7 6.3 7.6e-14 51.5 4.3 1.1 1 0 0 1 1 1 1 Chorismate mutase type II TSC22 PF01166.13 gi|84488935|ref|YP_447167.1| - 0.016 15.1 1.9 0.023 14.6 0.1 2.0 1 1 0 2 2 2 0 TSC-22/dip/bun family MukE PF04288.8 gi|84488935|ref|YP_447167.1| - 0.097 11.4 0.6 0.11 11.2 0.4 1.1 1 0 0 1 1 1 0 MukE-like family Sigma70_r1_1 PF03979.9 gi|84488935|ref|YP_447167.1| - 0.098 12.6 2.4 0.11 12.4 0.8 1.7 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 GM_CSF PF01109.12 gi|84488935|ref|YP_447167.1| - 0.19 11.7 0.6 0.31 10.9 0.1 1.6 1 1 1 2 2 2 0 Granulocyte-macrophage colony-stimulating factor Ribosomal_S17e PF00833.13 gi|84488936|ref|YP_447168.1| - 2.8e-20 72.2 0.1 3e-20 72.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal S17 AA_kinase PF00696.23 gi|84488937|ref|YP_447169.1| - 1.2e-47 162.5 1.9 1.8e-47 161.9 1.3 1.3 1 0 0 1 1 1 1 Amino acid kinase family ACT_7 PF13840.1 gi|84488937|ref|YP_447169.1| - 6.9e-16 57.5 1.6 3.3e-10 39.3 0.1 2.8 3 0 0 3 3 3 2 ACT domain ACT PF01842.20 gi|84488937|ref|YP_447169.1| - 4.7e-05 22.7 0.2 0.00061 19.2 0.0 2.6 2 1 0 2 2 2 1 ACT domain ACT_4 PF13291.1 gi|84488937|ref|YP_447169.1| - 0.00089 19.5 0.5 0.97 9.8 0.1 2.6 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.1 gi|84488937|ref|YP_447169.1| - 0.026 14.2 0.4 0.46 10.2 0.0 2.4 2 0 0 2 2 2 0 ACT domain DUF1020 PF06255.8 gi|84488937|ref|YP_447169.1| - 0.1 11.8 0.7 0.16 11.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1020) DHDPS PF00701.17 gi|84488938|ref|YP_447170.1| - 8e-89 297.0 0.3 9.1e-89 296.8 0.2 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family CutC PF03932.9 gi|84488938|ref|YP_447170.1| - 0.0034 16.6 0.0 0.0058 15.9 0.0 1.3 1 0 0 1 1 1 1 CutC family DapB_C PF05173.9 gi|84488939|ref|YP_447171.1| - 2.3e-44 150.3 0.5 4.1e-44 149.5 0.2 1.5 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.15 gi|84488939|ref|YP_447171.1| - 1.8e-34 118.3 2.8 1.8e-34 118.3 1.9 2.0 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|84488939|ref|YP_447171.1| - 0.00028 21.1 0.2 0.00067 19.9 0.1 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|84488939|ref|YP_447171.1| - 0.0066 15.4 0.7 0.0098 14.9 0.5 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 gi|84488939|ref|YP_447171.1| - 0.0091 16.0 0.3 0.025 14.6 0.2 1.7 1 1 0 1 1 1 1 NADH(P)-binding ADH_zinc_N PF00107.21 gi|84488939|ref|YP_447171.1| - 0.011 15.2 0.4 0.069 12.6 0.2 2.2 1 1 1 2 2 2 0 Zinc-binding dehydrogenase NAD_binding_3 PF03447.11 gi|84488939|ref|YP_447171.1| - 0.066 13.6 0.4 0.16 12.3 0.3 1.7 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|84488940|ref|YP_447172.1| - 5.9e-44 150.1 0.0 8.7e-44 149.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 gi|84488940|ref|YP_447172.1| - 1.5e-29 102.7 0.0 2.4e-29 102.0 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|84488940|ref|YP_447172.1| - 0.00071 19.4 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus DXP_reductoisom PF02670.11 gi|84488940|ref|YP_447172.1| - 0.0052 17.3 0.0 0.014 15.9 0.0 1.6 1 1 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase Gp_dh_C PF02800.15 gi|84488940|ref|YP_447172.1| - 0.022 14.1 0.0 0.089 12.2 0.0 1.9 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFO_IDH_MocA PF01408.17 gi|84488940|ref|YP_447172.1| - 0.025 15.0 0.0 0.046 14.2 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Saccharop_dh PF03435.13 gi|84488940|ref|YP_447172.1| - 0.034 13.1 0.0 0.049 12.5 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NAD_binding_10 PF13460.1 gi|84488940|ref|YP_447172.1| - 0.07 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 NADH(P)-binding PAP2 PF01569.16 gi|84488941|ref|YP_447173.1| - 2.7e-21 75.5 3.4 2.7e-21 75.5 2.4 1.8 1 1 1 2 2 2 1 PAP2 superfamily PAP2_C PF14360.1 gi|84488941|ref|YP_447173.1| - 0.0033 17.6 1.7 0.0033 17.6 1.2 2.8 2 1 0 3 3 3 1 PAP2 superfamily C-terminal PAP2_3 PF14378.1 gi|84488941|ref|YP_447173.1| - 0.01 15.3 3.2 0.089 12.3 2.2 2.0 1 1 0 1 1 1 0 PAP2 superfamily URO-D PF01208.12 gi|84488942|ref|YP_447174.1| - 2.3e-73 247.0 0.0 2.8e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) SlyX PF04102.7 gi|84488943|ref|YP_447175.1| - 0.0042 17.4 3.1 0.0042 17.4 2.1 16.7 4 4 10 18 18 18 6 SlyX Reo_sigmaC PF04582.7 gi|84488943|ref|YP_447175.1| - 0.091 11.9 95.6 0.18 10.9 3.7 8.4 1 1 6 8 8 8 0 Reovirus sigma C capsid protein Spc7 PF08317.6 gi|84488943|ref|YP_447175.1| - 0.69 8.5 224.7 0.057 12.0 12.7 10.8 1 1 10 11 11 11 0 Spc7 kinetochore protein AAA_13 PF13166.1 gi|84488943|ref|YP_447175.1| - 1.8 6.9 212.1 0.0047 15.4 21.8 6.5 1 1 6 7 7 7 0 AAA domain IncA PF04156.9 gi|84488943|ref|YP_447175.1| - 3.3 7.2 209.9 0.27 10.8 9.0 11.4 1 1 11 12 12 12 0 IncA protein Cpn60_TCP1 PF00118.19 gi|84488944|ref|YP_447176.1| - 1.4e-166 554.9 16.1 1.6e-166 554.7 11.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Thiolase_C PF02803.13 gi|84488946|ref|YP_447178.1| - 7.3e-13 48.0 0.2 2.1e-12 46.5 0.1 1.8 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|84488946|ref|YP_447178.1| - 1.4e-10 40.6 2.3 9.6e-10 37.8 0.2 2.3 2 0 0 2 2 2 1 Thiolase, N-terminal domain ACP_syn_III PF08545.5 gi|84488946|ref|YP_447178.1| - 1.2e-05 24.8 0.6 0.0013 18.3 0.4 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ketoacyl-synt PF00109.21 gi|84488946|ref|YP_447178.1| - 0.0014 18.1 3.1 0.0027 17.2 1.2 2.1 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.6 gi|84488946|ref|YP_447178.1| - 0.0049 15.3 0.0 0.0076 14.7 0.0 1.4 1 0 0 1 1 1 1 Stage V sporulation protein AD (SpoVAD) Ketoacyl-synt_C PF02801.17 gi|84488946|ref|YP_447178.1| - 0.18 11.6 2.2 8.1 6.3 0.0 3.1 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III_C PF08541.5 gi|84488947|ref|YP_447179.1| - 9e-11 41.6 0.0 2.7e-10 40.1 0.0 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_N PF01154.12 gi|84488947|ref|YP_447179.1| - 1.8e-06 27.6 0.0 2.5e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.5 gi|84488947|ref|YP_447179.1| - 4.2e-06 26.3 1.3 4.2e-06 26.3 0.9 1.8 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_C PF08540.5 gi|84488947|ref|YP_447179.1| - 4e-05 23.2 0.1 0.0028 17.1 0.0 2.1 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.18 gi|84488947|ref|YP_447179.1| - 0.048 12.6 0.2 0.07 12.0 0.1 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain ACT_4 PF13291.1 gi|84488948|ref|YP_447180.1| - 0.0011 19.2 0.6 0.003 17.8 0.0 2.0 2 0 0 2 2 2 1 ACT domain Peripla_BP_1 PF00532.16 gi|84488948|ref|YP_447180.1| - 0.066 12.4 0.1 0.096 11.8 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family Conotoxin PF02950.12 gi|84488949|ref|YP_447181.1| - 0.08 13.7 0.6 0.46 11.3 0.0 2.2 2 0 0 2 2 2 0 Conotoxin Shisa PF13908.1 gi|84488949|ref|YP_447181.1| - 0.54 10.4 2.3 0.35 11.0 0.1 1.8 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator HTH_5 PF01022.15 gi|84488950|ref|YP_447182.1| - 1.4e-19 69.4 1.4 2.8e-19 68.5 1.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|84488950|ref|YP_447182.1| - 2e-11 43.4 0.0 3e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|84488950|ref|YP_447182.1| - 2.7e-05 23.4 0.4 7e-05 22.1 0.3 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|84488950|ref|YP_447182.1| - 5.3e-05 23.1 0.2 9.7e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|84488950|ref|YP_447182.1| - 5.7e-05 22.7 0.0 8.7e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|84488950|ref|YP_447182.1| - 0.00069 19.8 0.0 0.0011 19.2 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|84488950|ref|YP_447182.1| - 0.0016 18.1 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.22 gi|84488950|ref|YP_447182.1| - 0.0028 17.3 0.1 0.0048 16.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Fe_dep_repress PF01325.14 gi|84488950|ref|YP_447182.1| - 0.003 17.4 0.0 0.0051 16.7 0.0 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.17 gi|84488950|ref|YP_447182.1| - 0.0054 16.4 0.1 0.0092 15.6 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|84488950|ref|YP_447182.1| - 0.0075 16.0 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.15 gi|84488950|ref|YP_447182.1| - 0.0076 16.3 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_23 PF13384.1 gi|84488950|ref|YP_447182.1| - 0.0078 15.8 0.0 0.014 15.0 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain DUF1492 PF07374.6 gi|84488950|ref|YP_447182.1| - 0.029 14.4 0.1 0.039 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) Arg_repressor PF01316.16 gi|84488950|ref|YP_447182.1| - 0.04 13.4 0.1 0.069 12.7 0.1 1.4 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain Sigma70_ECF PF07638.6 gi|84488950|ref|YP_447182.1| - 0.045 13.4 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor Penicillinase_R PF03965.11 gi|84488950|ref|YP_447182.1| - 0.047 13.7 0.0 0.08 13.0 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor TFIIE_alpha PF02002.12 gi|84488950|ref|YP_447182.1| - 0.073 12.5 0.3 0.15 11.5 0.2 1.7 1 1 0 1 1 1 0 TFIIE alpha subunit UPF0122 PF04297.9 gi|84488950|ref|YP_447182.1| - 0.077 13.0 0.1 0.12 12.3 0.1 1.4 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Sigma70_r4_2 PF08281.7 gi|84488950|ref|YP_447182.1| - 0.11 11.9 0.1 0.27 10.7 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 E1-E2_ATPase PF00122.15 gi|84488951|ref|YP_447183.1| - 4e-56 189.6 3.7 4e-56 189.6 2.6 3.0 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|84488951|ref|YP_447183.1| - 9.8e-42 143.7 0.7 1.9e-41 142.8 0.5 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|84488951|ref|YP_447183.1| - 1.5e-16 61.1 0.2 4.2e-16 59.6 0.1 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PduV-EutP PF10662.4 gi|84488951|ref|YP_447183.1| - 0.0023 17.4 0.3 0.0079 15.6 0.2 1.9 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation F420_ligase PF01996.11 gi|84488951|ref|YP_447183.1| - 0.0025 16.9 0.8 0.0053 15.8 0.5 1.6 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Claudin_2 PF13903.1 gi|84488951|ref|YP_447183.1| - 0.02 14.5 0.3 0.52 9.9 0.0 2.4 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction CBFD_NFYB_HMF PF00808.18 gi|84488952|ref|YP_447184.1| - 2.5e-20 72.2 0.1 2.8e-20 72.1 0.0 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84488952|ref|YP_447184.1| - 3.1e-15 56.0 0.0 3.5e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|84488952|ref|YP_447184.1| - 3.4e-06 27.1 0.0 4.4e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Kinetochore component CENP-S TFIID_20kDa PF03847.8 gi|84488952|ref|YP_447184.1| - 3.9e-06 27.0 0.1 4.5e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A CENP-T PF15511.1 gi|84488952|ref|YP_447184.1| - 8.1e-06 25.3 0.0 8.2e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T Bromo_TP PF07524.8 gi|84488952|ref|YP_447184.1| - 1.3e-05 24.7 0.0 1.5e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TAF PF02969.12 gi|84488952|ref|YP_447184.1| - 2.6e-05 24.0 0.1 2.9e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-31kDa PF02291.10 gi|84488952|ref|YP_447184.1| - 0.00094 18.9 0.0 0.0011 18.6 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit tRNA-synt_1e PF01406.14 gi|84488953|ref|YP_447185.1| - 1.5e-120 401.8 0.9 2.6e-120 401.1 0.7 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|84488953|ref|YP_447185.1| - 2.7e-25 88.8 2.0 5.7e-14 51.5 0.6 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.6 gi|84488953|ref|YP_447185.1| - 6e-12 45.6 0.8 1.5e-11 44.4 0.5 1.7 1 0 0 1 1 1 1 DALR domain tRNA-synt_1 PF00133.17 gi|84488953|ref|YP_447185.1| - 2e-09 36.0 0.1 1.1e-05 23.6 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.13 gi|84488953|ref|YP_447185.1| - 8.9e-09 34.4 0.2 6.6e-07 28.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|84488953|ref|YP_447185.1| - 0.0033 16.2 5.3 0.77 8.5 1.6 3.8 3 1 0 3 3 3 1 tRNA synthetases class I (R) SPT16 PF08644.6 gi|84488953|ref|YP_447185.1| - 0.098 12.5 1.7 0.59 9.9 0.2 2.6 2 1 0 2 2 2 0 FACT complex subunit (SPT16/CDC68) Fer4_8 PF13183.1 gi|84488954|ref|YP_447186.1| - 8.5e-12 44.9 5.9 1.9e-11 43.8 4.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84488954|ref|YP_447186.1| - 1.5e-08 34.8 6.9 3.1e-08 33.8 4.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84488954|ref|YP_447186.1| - 5.5e-07 29.8 8.7 7.3e-07 29.4 5.4 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84488954|ref|YP_447186.1| - 7.3e-07 29.3 10.1 1.9e-06 28.0 7.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84488954|ref|YP_447186.1| - 2e-06 27.4 9.3 3.1e-06 26.8 6.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84488954|ref|YP_447186.1| - 1.2e-05 25.9 8.6 4.7e-05 24.0 6.0 2.1 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|84488954|ref|YP_447186.1| - 1.8e-05 25.0 8.0 0.0028 18.0 0.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84488954|ref|YP_447186.1| - 9.8e-05 22.0 8.8 0.0067 16.2 1.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|84488954|ref|YP_447186.1| - 0.00013 21.3 16.8 0.003 17.0 2.0 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84488954|ref|YP_447186.1| - 0.00024 20.9 9.2 0.00063 19.5 6.4 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84488954|ref|YP_447186.1| - 0.0016 18.6 16.0 0.011 15.9 1.5 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84488954|ref|YP_447186.1| - 0.06 13.2 15.9 0.11 12.4 3.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84488954|ref|YP_447186.1| - 3.5 8.1 8.2 1.2 9.6 0.2 2.6 2 1 0 2 2 2 0 4Fe-4S single cluster domain CCG PF02754.11 gi|84488955|ref|YP_447187.1| - 4.5e-20 71.4 6.7 1.3e-11 44.3 0.1 3.0 4 0 0 4 4 4 2 Cysteine-rich domain Radical_SAM PF04055.16 gi|84488955|ref|YP_447187.1| - 0.064 13.4 0.4 0.12 12.5 0.3 1.4 1 0 0 1 1 1 0 Radical SAM superfamily YwqJ-deaminase PF14431.1 gi|84488955|ref|YP_447187.1| - 0.091 12.6 1.4 0.38 10.6 0.1 2.2 2 0 0 2 2 2 0 YwqJ-like deaminase FlpD PF02662.11 gi|84488956|ref|YP_447188.1| - 7e-24 83.8 0.2 9.3e-23 80.2 0.0 3.0 3 0 0 3 3 3 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4 PF00037.22 gi|84488956|ref|YP_447188.1| - 2.2e-19 68.1 42.9 1.1e-07 31.1 2.4 5.0 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84488956|ref|YP_447188.1| - 7.7e-18 64.0 27.5 3.1e-06 26.8 6.8 4.1 4 0 0 4 4 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84488956|ref|YP_447188.1| - 1e-16 61.0 36.3 1.6e-07 31.6 8.1 4.7 3 2 2 5 5 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84488956|ref|YP_447188.1| - 3.1e-15 56.1 38.5 8.1e-10 38.8 5.3 4.2 4 1 0 4 4 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84488956|ref|YP_447188.1| - 1.4e-14 53.2 45.8 3.9e-05 23.3 2.3 5.3 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84488956|ref|YP_447188.1| - 2.8e-13 50.3 25.5 0.00013 22.6 0.2 5.3 5 0 0 5 5 4 4 4Fe-4S double cluster binding domain Pyr_redox_2 PF07992.9 gi|84488956|ref|YP_447188.1| - 1e-12 48.3 0.0 4.8e-11 42.9 0.0 3.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_8 PF13183.1 gi|84488956|ref|YP_447188.1| - 2.7e-12 46.5 30.0 5.1e-07 29.6 8.5 4.1 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84488956|ref|YP_447188.1| - 6.1e-12 44.7 45.2 1.4e-05 24.6 2.4 5.2 5 0 0 5 5 4 4 4Fe-4S binding domain DAO PF01266.19 gi|84488956|ref|YP_447188.1| - 4.1e-11 42.3 0.8 2.6e-09 36.4 0.3 2.7 3 0 0 3 3 3 1 FAD dependent oxidoreductase Fer4_17 PF13534.1 gi|84488956|ref|YP_447188.1| - 1.4e-09 38.1 27.2 0.013 15.8 0.8 5.3 4 1 2 6 6 6 5 4Fe-4S dicluster domain NAD_binding_8 PF13450.1 gi|84488956|ref|YP_447188.1| - 2.1e-09 37.2 0.0 4.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|84488956|ref|YP_447188.1| - 2.5e-09 36.6 0.0 8.6e-09 34.8 0.0 1.9 1 0 0 1 1 1 1 Thi4 family Fer4_21 PF14697.1 gi|84488956|ref|YP_447188.1| - 6e-09 35.6 44.7 4.1e-06 26.5 9.3 4.3 4 1 1 5 5 4 3 4Fe-4S dicluster domain FAD_oxidored PF12831.2 gi|84488956|ref|YP_447188.1| - 2.3e-08 33.5 3.7 1.8e-07 30.5 1.6 2.1 1 1 1 2 2 2 1 FAD dependent oxidoreductase Fer4_18 PF13746.1 gi|84488956|ref|YP_447188.1| - 4.5e-08 33.3 32.6 0.0017 18.6 1.4 4.8 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84488956|ref|YP_447188.1| - 8.9e-08 32.5 22.0 0.0039 17.7 1.0 4.9 4 0 0 4 4 4 3 4Fe-4S single cluster domain Pyr_redox PF00070.22 gi|84488956|ref|YP_447188.1| - 2.1e-06 28.0 4.6 6.7e-05 23.2 0.6 3.3 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|84488956|ref|YP_447188.1| - 4.3e-06 26.9 0.2 2.7e-05 24.3 0.1 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|84488956|ref|YP_447188.1| - 5.7e-06 25.4 2.8 8.9e-06 24.7 1.9 1.2 1 0 0 1 1 1 1 FAD binding domain Fer4_4 PF12800.2 gi|84488956|ref|YP_447188.1| - 1.5e-05 24.9 48.8 0.0048 17.1 3.0 5.5 5 0 0 5 5 4 3 4Fe-4S binding domain FAD_binding_3 PF01494.14 gi|84488956|ref|YP_447188.1| - 7.8e-05 21.8 0.5 0.00012 21.2 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|84488956|ref|YP_447188.1| - 0.00013 20.5 2.0 0.00021 19.8 1.4 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.17 gi|84488956|ref|YP_447188.1| - 0.00023 20.1 0.2 0.00043 19.2 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Amino_oxidase PF01593.19 gi|84488956|ref|YP_447188.1| - 0.00087 18.4 0.1 0.0014 17.7 0.0 1.3 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.1 gi|84488956|ref|YP_447188.1| - 0.0017 18.1 0.2 0.019 14.7 0.0 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding 3HCDH_N PF02737.13 gi|84488956|ref|YP_447188.1| - 0.0071 16.0 0.2 0.015 14.9 0.2 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|84488956|ref|YP_447188.1| - 0.0093 15.4 1.6 0.038 13.4 0.1 2.3 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.9 gi|84488956|ref|YP_447188.1| - 0.015 13.9 0.2 0.025 13.1 0.1 1.4 1 0 0 1 1 1 0 Tryptophan halogenase Lycopene_cycl PF05834.7 gi|84488956|ref|YP_447188.1| - 0.025 13.5 0.2 0.037 12.9 0.1 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Fer4_13 PF13370.1 gi|84488956|ref|YP_447188.1| - 0.11 12.9 35.8 0.11 12.8 2.2 4.8 4 0 0 4 4 4 0 4Fe-4S single cluster domain NAD_binding_7 PF13241.1 gi|84488956|ref|YP_447188.1| - 0.14 12.4 1.0 0.57 10.4 0.1 2.5 3 0 0 3 3 2 0 Putative NAD(P)-binding Fer4_3 PF12798.2 gi|84488956|ref|YP_447188.1| - 0.19 12.3 59.0 0.061 13.9 3.6 6.1 6 0 0 6 6 5 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|84488956|ref|YP_447188.1| - 0.31 10.9 20.4 1.3 9.0 2.7 4.1 4 0 0 4 4 3 0 4Fe-4S dicluster domain K_oxygenase PF13434.1 gi|84488956|ref|YP_447188.1| - 0.44 9.4 1.1 3.6 6.3 0.0 2.7 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) UvrD-helicase PF00580.16 gi|84488957|ref|YP_447189.1| - 4.9e-39 134.4 3.0 1.1e-37 130.0 2.1 2.5 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|84488957|ref|YP_447189.1| - 5e-18 65.6 0.4 1.4e-11 44.5 0.0 3.1 2 1 1 3 3 3 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.1 gi|84488957|ref|YP_447189.1| - 7.8e-07 29.1 0.2 0.0011 19.0 0.0 3.0 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.1 gi|84488957|ref|YP_447189.1| - 1.3e-06 28.0 0.0 2.6e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_12 PF13087.1 gi|84488957|ref|YP_447189.1| - 1e-05 25.0 0.1 0.0029 17.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.4 gi|84488957|ref|YP_447189.1| - 0.00057 18.9 0.2 2.4 7.0 0.0 3.8 3 1 0 4 4 4 2 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.1 gi|84488957|ref|YP_447189.1| - 0.0012 18.4 0.0 0.0036 16.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.1 gi|84488957|ref|YP_447189.1| - 0.0038 16.8 0.9 0.0083 15.7 0.0 2.1 3 0 0 3 3 3 1 AAA domain Viral_helicase1 PF01443.13 gi|84488957|ref|YP_447189.1| - 0.042 13.3 0.0 37 3.7 0.0 4.0 4 0 0 4 4 4 0 Viral (Superfamily 1) RNA helicase DEAD PF00270.24 gi|84488957|ref|YP_447189.1| - 0.094 12.2 0.0 0.45 9.9 0.0 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_17 PF13207.1 gi|84488957|ref|YP_447189.1| - 0.097 13.4 4.0 0.11 13.2 0.2 3.1 2 2 0 2 2 2 0 AAA domain AAA_26 PF13500.1 gi|84488958|ref|YP_447190.1| - 0.14 11.7 0.0 0.56 9.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain Cpn60_TCP1 PF00118.19 gi|84488959|ref|YP_447191.1| - 4.6e-148 493.8 18.1 5.4e-148 493.6 12.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Phe_tRNA-synt_N PF02912.13 gi|84488959|ref|YP_447191.1| - 0.034 13.8 0.0 0.18 11.5 0.0 2.3 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain Histidinol_dh PF00815.15 gi|84488963|ref|YP_447195.1| - 8.9e-163 541.7 5.0 1e-162 541.5 3.5 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase tRNA-synt_2 PF00152.15 gi|84488964|ref|YP_447196.1| - 3.7e-94 315.2 1.1 4.8e-94 314.8 0.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|84488964|ref|YP_447196.1| - 7.8e-12 44.8 0.1 1.3e-11 44.1 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|84488964|ref|YP_447196.1| - 6.4e-05 22.2 0.2 0.014 14.5 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DUF2346 PF09803.4 gi|84488966|ref|YP_447198.1| - 0.085 12.7 0.4 0.13 12.1 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2346) PapG_N PF03627.8 gi|84488966|ref|YP_447198.1| - 0.11 11.9 1.8 0.12 11.8 1.2 1.2 1 0 0 1 1 1 0 PapG carbohydrate binding domain RNase_T PF00929.19 gi|84488969|ref|YP_447201.1| - 1.9e-18 67.2 0.1 5.4e-18 65.8 0.0 1.8 2 0 0 2 2 2 1 Exonuclease RNase_H_2 PF13482.1 gi|84488969|ref|YP_447201.1| - 1.1e-05 25.3 0.3 5.1e-05 23.1 0.2 2.1 1 1 0 1 1 1 1 RNase_H superfamily BRCT PF00533.21 gi|84488969|ref|YP_447201.1| - 0.00095 19.2 0.1 0.0037 17.3 0.1 2.1 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain DUF957 PF06117.6 gi|84488969|ref|YP_447201.1| - 0.0023 17.4 1.1 0.42 10.2 0.0 3.1 3 0 0 3 3 3 1 Enterobacterial protein of unknown function (DUF957) DNA_pol_A_exo1 PF01612.15 gi|84488969|ref|YP_447201.1| - 0.029 13.8 0.3 0.11 11.9 0.0 2.1 2 1 1 3 3 3 0 3'-5' exonuclease CarboxypepD_reg PF13620.1 gi|84488970|ref|YP_447202.1| - 1e-67 224.1 122.8 8.1e-11 41.8 0.6 14.6 14 1 1 15 15 15 10 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|84488970|ref|YP_447202.1| - 1.3e-33 114.8 107.8 6.6e-05 22.8 1.1 13.2 12 1 1 13 13 13 10 Domain of unknown function (DUF4480) Big_1 PF02369.11 gi|84488970|ref|YP_447202.1| - 2.9e-18 65.6 209.9 0.00096 19.0 2.4 19.4 15 2 3 19 19 19 13 Bacterial Ig-like domain (group 1) A2M_N PF01835.14 gi|84488970|ref|YP_447202.1| - 9.5e-10 38.6 33.9 0.43 10.8 0.1 11.7 10 2 0 11 11 11 5 MG2 domain Big_3_4 PF13754.1 gi|84488970|ref|YP_447202.1| - 0.0032 17.7 10.8 0.0079 16.4 2.6 17.6 16 3 2 18 18 18 8 Bacterial Ig-like domain (group 3) DUF1628 PF07790.6 gi|84488971|ref|YP_447203.1| - 0.0022 18.7 1.6 0.0036 18.0 0.6 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF1628) GSH_synthase PF03199.10 gi|84488971|ref|YP_447203.1| - 0.053 13.6 0.6 0.11 12.5 0.4 1.6 1 1 0 1 1 1 0 Eukaryotic glutathione synthase MethyltransfD12 PF02086.10 gi|84488972|ref|YP_447204.1| - 3e-60 203.8 15.7 3.8e-60 203.5 10.9 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase YojJ PF10372.4 gi|84488972|ref|YP_447204.1| - 0.067 13.0 2.3 0.23 11.3 0.1 2.7 3 0 0 3 3 3 0 Bacterial membrane-spanning protein N-terminus DpnII PF04556.7 gi|84488973|ref|YP_447205.1| - 9.9e-83 277.5 15.1 1.2e-82 277.1 10.5 1.0 1 0 0 1 1 1 1 DpnII restriction endonuclease HSDR_N_2 PF13588.1 gi|84488973|ref|YP_447205.1| - 0.0013 18.5 0.2 0.0051 16.6 0.1 2.0 1 1 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) Beta_helix PF13229.1 gi|84488974|ref|YP_447206.1| - 1.8e-08 34.3 194.2 0.00015 21.5 31.6 17.9 5 3 9 15 15 15 8 Right handed beta helix region Fer4 PF00037.22 gi|84488976|ref|YP_447208.1| - 2e-19 68.2 20.1 1.2e-11 43.6 4.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84488976|ref|YP_447208.1| - 2.1e-14 53.0 24.5 2.3e-09 36.9 9.5 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84488976|ref|YP_447208.1| - 1.2e-13 50.2 16.9 1.4e-08 34.2 2.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84488976|ref|YP_447208.1| - 2e-12 46.2 15.6 1.1e-07 31.2 3.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84488976|ref|YP_447208.1| - 1.5e-10 40.7 15.9 2e-05 24.3 2.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84488976|ref|YP_447208.1| - 1.8e-10 41.0 14.9 2.6e-10 40.5 10.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84488976|ref|YP_447208.1| - 3.6e-10 39.9 27.9 6.3e-08 32.7 11.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84488976|ref|YP_447208.1| - 1.1e-09 37.8 13.7 0.00014 21.8 2.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84488976|ref|YP_447208.1| - 1.7e-09 38.3 11.8 0.00011 22.8 2.6 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|84488976|ref|YP_447208.1| - 9.4e-07 29.1 16.6 0.0027 18.1 2.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84488976|ref|YP_447208.1| - 2.7e-06 27.3 15.2 0.00012 22.0 10.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84488976|ref|YP_447208.1| - 4.8e-06 27.0 15.3 0.0013 19.2 3.8 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84488976|ref|YP_447208.1| - 1.1e-05 25.6 18.3 0.01 16.2 3.8 2.6 2 1 1 3 3 3 3 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|84488976|ref|YP_447208.1| - 2.1e-05 24.7 13.3 0.016 15.5 1.5 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84488976|ref|YP_447208.1| - 4.3e-05 23.7 23.6 0.025 15.0 5.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|84488976|ref|YP_447208.1| - 0.01 15.6 6.3 0.014 15.2 4.4 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Tmemb_55A PF09788.4 gi|84488976|ref|YP_447208.1| - 0.24 10.4 8.0 0.39 9.7 1.0 2.0 1 1 1 2 2 2 0 Transmembrane protein 55A stn_TNFRSF12A PF12191.3 gi|84488976|ref|YP_447208.1| - 2.1 8.4 5.7 1.6 8.7 2.3 1.8 1 1 1 2 2 2 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain SSF PF00474.12 gi|84488977|ref|YP_447209.1| - 5e-59 199.9 40.1 7.3e-59 199.4 27.8 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family HTH_18 PF12833.2 gi|84488978|ref|YP_447210.1| - 4.9e-19 68.2 0.0 8.1e-19 67.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.18 gi|84488978|ref|YP_447210.1| - 3.7e-11 42.4 0.0 1.1e-08 34.5 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DEAD_assoc PF08494.6 gi|84488979|ref|YP_447211.1| - 2.2e-57 193.8 0.0 3.3e-57 193.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|84488979|ref|YP_447211.1| - 1.8e-29 102.3 0.2 8.2e-29 100.2 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|84488979|ref|YP_447211.1| - 7.1e-15 54.6 0.0 5.3e-14 51.8 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|84488979|ref|YP_447211.1| - 4.3e-07 29.9 0.0 1.8e-06 27.9 0.0 2.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.11 gi|84488979|ref|YP_447211.1| - 0.015 14.5 0.0 0.061 12.5 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein T2SE PF00437.15 gi|84488979|ref|YP_447211.1| - 0.015 14.1 0.6 0.17 10.7 0.1 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein UvrD-helicase PF00580.16 gi|84488979|ref|YP_447211.1| - 0.15 11.3 2.2 0.19 10.9 0.1 2.2 3 0 0 3 3 3 0 UvrD/REP helicase N-terminal domain Metallophos_2 PF12850.2 gi|84488980|ref|YP_447212.1| - 6.3e-07 29.3 0.4 9.3e-07 28.8 0.3 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84488980|ref|YP_447212.1| - 0.00028 20.3 5.9 0.0049 16.2 4.0 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase ATP-synt_B PF00430.13 gi|84488981|ref|YP_447213.1| - 0.061 13.1 1.1 0.066 13.0 0.8 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) GIDA PF01134.17 gi|84488981|ref|YP_447213.1| - 0.65 8.8 2.7 0.71 8.6 1.9 1.0 1 0 0 1 1 1 0 Glucose inhibited division protein A HEAT_2 PF13646.1 gi|84488982|ref|YP_447214.1| - 2.4e-33 114.2 3.1 1.1e-16 60.9 0.1 3.1 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.17 gi|84488982|ref|YP_447214.1| - 5.8e-21 72.6 0.1 0.00011 21.9 0.0 5.4 5 0 0 5 5 5 5 HEAT repeat HEAT_PBS PF03130.11 gi|84488982|ref|YP_447214.1| - 3.3e-18 64.2 0.0 0.00083 19.5 0.0 5.2 5 1 0 5 5 5 3 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|84488982|ref|YP_447214.1| - 2.4e-14 53.3 1.3 0.0057 17.1 0.0 4.6 2 2 3 5 5 5 4 HEAT-like repeat Arm PF00514.18 gi|84488982|ref|YP_447214.1| - 1.3e-06 27.9 0.1 2.1 8.2 0.0 4.9 4 1 1 5 5 5 2 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.2 gi|84488982|ref|YP_447214.1| - 0.00034 20.9 0.0 0.45 10.9 0.0 3.1 1 1 3 4 4 4 2 Vacuolar 14 Fab1-binding region Adaptin_N PF01602.15 gi|84488982|ref|YP_447214.1| - 0.0007 18.0 0.3 0.023 13.0 0.2 2.5 1 1 0 1 1 1 1 Adaptin N terminal region DUF2019 PF09450.5 gi|84488982|ref|YP_447214.1| - 0.0098 15.7 0.0 0.031 14.1 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF2019) Aconitase_B_N PF11791.3 gi|84488982|ref|YP_447214.1| - 0.013 15.2 1.0 1.2 8.9 0.0 2.9 4 0 0 4 4 4 0 Aconitate B N-terminal domain CarboxypepD_reg PF13620.1 gi|84488983|ref|YP_447215.1| - 1.9e-55 184.8 117.5 1.9e-07 31.0 2.6 16.8 17 0 0 17 17 17 14 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|84488983|ref|YP_447215.1| - 1.3e-26 92.4 151.9 2.5e-05 24.2 3.6 16.6 17 1 1 18 18 18 14 Domain of unknown function (DUF4480) Big_1 PF02369.11 gi|84488983|ref|YP_447215.1| - 3e-19 68.7 178.2 0.0014 18.4 1.1 19.3 18 2 1 19 19 19 14 Bacterial Ig-like domain (group 1) Dioxygenase_C PF00775.16 gi|84488983|ref|YP_447215.1| - 3.6e-10 39.4 11.2 0.64 9.2 0.0 12.5 13 2 1 14 14 14 2 Dioxygenase phage_tail_N PF08400.5 gi|84488983|ref|YP_447215.1| - 4.4e-08 32.9 52.7 0.00024 20.7 2.4 13.0 12 0 0 12 12 12 6 Prophage tail fibre N-terminal CN_hydrolase PF00795.17 gi|84488984|ref|YP_447216.1| - 1.4e-34 119.0 0.0 3.2e-34 117.8 0.0 1.5 2 0 0 2 2 2 1 Carbon-nitrogen hydrolase DUF3875 PF12991.2 gi|84488984|ref|YP_447216.1| - 0.13 12.0 0.0 1.2 8.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3875) DUF1863 PF08937.6 gi|84488985|ref|YP_447217.1| - 0.0006 19.8 0.1 0.0021 18.0 0.1 1.8 1 1 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) NAD_binding_10 PF13460.1 gi|84488985|ref|YP_447217.1| - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 NADH(P)-binding DUF91 PF01939.11 gi|84488986|ref|YP_447218.1| - 6.5e-78 261.0 0.0 7.6e-78 260.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF91 DUF1703 PF08011.6 gi|84488986|ref|YP_447218.1| - 0.0012 18.5 0.1 0.0023 17.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1703) Imm45 PF15603.1 gi|84488986|ref|YP_447218.1| - 0.0029 17.7 0.0 0.0053 16.8 0.0 1.5 1 0 0 1 1 1 1 Immunity protein 45 ABC2_membrane_4 PF12730.2 gi|84488987|ref|YP_447219.1| - 2.8 7.0 21.0 4.4 6.3 14.6 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|84488987|ref|YP_447219.1| - 3.3 6.4 15.7 4.6 6.0 10.9 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein HupE_UreJ PF04955.7 gi|84488987|ref|YP_447219.1| - 3.9 6.7 10.5 5.4 6.2 7.2 1.2 1 0 0 1 1 1 0 HupE / UreJ protein NB PF04159.8 gi|84488987|ref|YP_447219.1| - 6.1 6.6 5.7 5.5 6.7 2.5 2.0 1 1 1 2 2 2 0 NB glycoprotein Peptidase_S49_N PF08496.5 gi|84488987|ref|YP_447219.1| - 6.2 6.5 10.8 0.099 12.4 1.1 2.2 2 1 0 2 2 2 0 Peptidase family S49 N-terminal GMC_oxred_N PF00732.14 gi|84488988|ref|YP_447220.1| - 6.4e-20 71.4 0.0 5.6e-18 65.1 0.0 2.3 1 1 0 1 1 1 1 GMC oxidoreductase DAO PF01266.19 gi|84488988|ref|YP_447220.1| - 1.9e-15 56.6 0.5 2.9e-14 52.7 0.4 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|84488988|ref|YP_447220.1| - 5.8e-09 36.1 1.0 0.00014 21.8 0.0 2.9 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|84488988|ref|YP_447220.1| - 8.4e-09 34.8 0.7 6e-06 25.5 0.0 2.4 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.19 gi|84488988|ref|YP_447220.1| - 5.4e-08 32.1 0.2 0.00022 20.1 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain GMC_oxred_C PF05199.8 gi|84488988|ref|YP_447220.1| - 1.1e-06 29.0 0.0 1.9e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 GMC oxidoreductase HI0933_like PF03486.9 gi|84488988|ref|YP_447220.1| - 3.2e-06 25.9 0.3 0.087 11.2 0.0 2.9 3 0 0 3 3 3 2 HI0933-like protein Fer4 PF00037.22 gi|84488988|ref|YP_447220.1| - 8.6e-06 25.1 4.5 1.9e-05 24.0 3.1 1.5 1 0 0 1 1 1 1 4Fe-4S binding domain NAD_binding_8 PF13450.1 gi|84488988|ref|YP_447220.1| - 8.7e-06 25.6 0.0 2.1e-05 24.4 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|84488988|ref|YP_447220.1| - 1e-05 24.6 0.0 1.6e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.1 gi|84488988|ref|YP_447220.1| - 1.8e-05 24.5 0.0 0.0039 16.9 0.0 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding Pyr_redox_3 PF13738.1 gi|84488988|ref|YP_447220.1| - 2.5e-05 24.4 0.0 0.013 15.5 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|84488988|ref|YP_447220.1| - 3.6e-05 22.8 0.1 0.0026 16.6 0.1 2.2 2 0 0 2 2 2 1 Glucose inhibited division protein A Fer4_21 PF14697.1 gi|84488988|ref|YP_447220.1| - 0.00058 19.6 0.1 0.003 17.3 0.1 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84488988|ref|YP_447220.1| - 0.00095 18.9 2.8 0.0018 18.0 1.9 1.4 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84488988|ref|YP_447220.1| - 0.0017 18.1 0.2 0.0031 17.2 0.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain TrkA_N PF02254.13 gi|84488988|ref|YP_447220.1| - 0.0017 18.3 0.2 0.011 15.7 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain FAD_binding_3 PF01494.14 gi|84488988|ref|YP_447220.1| - 0.0019 17.3 0.0 0.0038 16.3 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Fer4_9 PF13187.1 gi|84488988|ref|YP_447220.1| - 0.0053 16.9 0.1 0.01 16.0 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain B12D PF06522.6 gi|84488988|ref|YP_447220.1| - 0.0066 16.1 0.0 0.018 14.7 0.0 1.7 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit Fer4_7 PF12838.2 gi|84488988|ref|YP_447220.1| - 0.012 15.9 0.2 0.024 15.0 0.1 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84488988|ref|YP_447220.1| - 0.017 15.4 1.9 0.034 14.4 1.3 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84488988|ref|YP_447220.1| - 0.028 14.7 0.3 0.05 13.9 0.2 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84488988|ref|YP_447220.1| - 0.037 14.0 0.1 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84488988|ref|YP_447220.1| - 0.066 13.1 3.6 0.16 11.9 2.5 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Pyr_redox PF00070.22 gi|84488988|ref|YP_447220.1| - 0.068 13.5 1.0 0.28 11.6 0.0 2.5 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase Saccharop_dh PF03435.13 gi|84488988|ref|YP_447220.1| - 0.092 11.7 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Trp_halogenase PF04820.9 gi|84488988|ref|YP_447220.1| - 0.14 10.7 0.2 0.73 8.3 0.0 1.9 2 0 0 2 2 2 0 Tryptophan halogenase K_oxygenase PF13434.1 gi|84488988|ref|YP_447220.1| - 0.16 10.8 0.1 0.5 9.2 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Fer4_13 PF13370.1 gi|84488988|ref|YP_447220.1| - 0.39 11.1 2.3 0.89 9.9 1.6 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain ThiI PF02568.9 gi|84488989|ref|YP_447221.1| - 4.5e-64 215.5 1.2 9e-64 214.5 0.2 1.9 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|84488989|ref|YP_447221.1| - 4.9e-23 81.6 0.7 9.9e-23 80.6 0.5 1.5 1 0 0 1 1 1 1 THUMP domain QueC PF06508.8 gi|84488989|ref|YP_447221.1| - 0.00012 21.4 0.1 0.0058 15.9 0.0 2.3 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|84488989|ref|YP_447221.1| - 0.00017 20.3 0.0 0.00031 19.4 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase RNase_PH_C PF03725.10 gi|84488989|ref|YP_447221.1| - 0.069 13.1 0.0 0.23 11.4 0.0 1.9 2 0 0 2 2 2 0 3' exoribonuclease family, domain 2 Asn_synthase PF00733.16 gi|84488989|ref|YP_447221.1| - 0.16 11.3 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase VWA_CoxE PF05762.9 gi|84488990|ref|YP_447222.1| - 2.4e-39 134.8 0.0 1.3e-38 132.3 0.0 1.8 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein DUF498 PF04430.9 gi|84488990|ref|YP_447222.1| - 0.014 14.8 0.0 0.043 13.3 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) GATase_3 PF07685.9 gi|84488991|ref|YP_447223.1| - 1.9e-30 105.5 0.2 2.9e-30 104.9 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|84488991|ref|YP_447223.1| - 2.1e-25 89.2 0.0 3.5e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|84488991|ref|YP_447223.1| - 1.8e-13 50.5 2.6 2.9e-08 33.5 0.0 2.4 1 1 0 2 2 2 2 AAA domain SNO PF01174.14 gi|84488991|ref|YP_447223.1| - 3.5e-05 23.5 0.0 6.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family AAA_17 PF13207.1 gi|84488991|ref|YP_447223.1| - 0.13 13.1 0.2 0.55 11.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain MTD PF01993.13 gi|84488992|ref|YP_447224.1| - 1.6e-112 375.1 3.9 1.7e-112 374.9 2.7 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase PEP-utilizers_C PF02896.13 gi|84488992|ref|YP_447224.1| - 0.031 13.1 0.0 0.046 12.5 0.0 1.4 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain IGPD PF00475.13 gi|84488993|ref|YP_447225.1| - 2.1e-61 206.0 0.6 2.1e-61 206.0 0.4 1.3 2 0 0 2 2 2 1 Imidazoleglycerol-phosphate dehydratase CEP44 PF15007.1 gi|84488993|ref|YP_447225.1| - 0.0069 16.0 0.0 0.18 11.5 0.0 2.2 2 0 0 2 2 2 1 Centrosomal spindle body, CEP44 Polysacc_synt PF01943.12 gi|84488994|ref|YP_447226.1| - 2.2e-39 135.3 22.5 2.2e-39 135.3 15.6 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|84488994|ref|YP_447226.1| - 4.7e-27 94.5 47.9 1.5e-25 89.6 22.2 3.8 4 1 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|84488994|ref|YP_447226.1| - 8.7e-21 73.8 34.7 2.7e-18 65.6 19.6 2.7 2 1 1 3 3 3 3 MviN-like protein MatE PF01554.13 gi|84488994|ref|YP_447226.1| - 2.2e-15 56.6 27.7 1.4e-13 50.7 10.5 4.0 3 2 1 4 4 4 2 MatE Polysacc_synt_3 PF13440.1 gi|84488994|ref|YP_447226.1| - 2.8e-11 43.3 14.9 2.8e-11 43.3 10.3 2.4 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein DUF70 PF01901.11 gi|84488995|ref|YP_447227.1| - 3.6e-102 341.8 53.4 4.1e-102 341.6 37.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF70 DUF354 PF04007.7 gi|84488996|ref|YP_447228.1| - 2.8e-09 36.3 2.5 4.9e-09 35.5 1.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF354) Epimerase_2 PF02350.14 gi|84488996|ref|YP_447228.1| - 3.7e-07 29.2 0.0 1.5e-06 27.2 0.0 1.9 1 1 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase CBFD_NFYB_HMF PF00808.18 gi|84488997|ref|YP_447229.1| - 7.7e-19 67.5 0.3 9.1e-19 67.2 0.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84488997|ref|YP_447229.1| - 5e-11 42.5 0.0 5.7e-11 42.3 0.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|84488997|ref|YP_447229.1| - 7.9e-06 25.9 0.0 8.8e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S TAF PF02969.12 gi|84488997|ref|YP_447229.1| - 8.2e-06 25.6 0.1 9.3e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T PF15511.1 gi|84488997|ref|YP_447229.1| - 0.00022 20.6 0.0 0.00023 20.5 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T Bromo_TP PF07524.8 gi|84488997|ref|YP_447229.1| - 0.0029 17.2 0.0 0.0034 17.0 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated TFIID_20kDa PF03847.8 gi|84488997|ref|YP_447229.1| - 0.019 15.2 0.2 0.023 14.9 0.2 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.5 gi|84488997|ref|YP_447229.1| - 0.032 14.0 1.4 0.24 11.3 1.0 2.1 1 1 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit RelB PF04221.7 gi|84488997|ref|YP_447229.1| - 0.049 13.3 0.0 0.072 12.8 0.0 1.3 1 0 0 1 1 1 0 RelB antitoxin ADH_zinc_N PF00107.21 gi|84488997|ref|YP_447229.1| - 0.065 12.7 0.6 0.67 9.5 0.1 1.9 1 1 1 2 2 2 0 Zinc-binding dehydrogenase ApbA_C PF08546.6 gi|84488997|ref|YP_447229.1| - 0.12 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal ArsA_ATPase PF02374.10 gi|84488998|ref|YP_447230.1| - 6.5e-110 366.9 0.2 7.4e-110 366.7 0.2 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.18 gi|84488998|ref|YP_447230.1| - 5.3e-13 48.8 0.1 1.2e-11 44.3 0.0 2.1 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|84488998|ref|YP_447230.1| - 4e-06 26.8 0.0 1.3e-05 25.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|84488998|ref|YP_447230.1| - 5.7e-06 25.9 3.3 0.017 14.5 0.3 3.1 3 0 0 3 3 3 2 SRP54-type protein, GTPase domain Fer4_NifH PF00142.13 gi|84488998|ref|YP_447230.1| - 0.00023 20.4 1.1 0.00035 19.8 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.1 gi|84488998|ref|YP_447230.1| - 0.00035 20.0 0.9 0.015 14.7 0.6 2.6 1 1 0 1 1 1 1 AAA domain YhjQ PF06564.7 gi|84488998|ref|YP_447230.1| - 0.0059 16.0 0.0 0.049 12.9 0.0 2.1 1 1 1 2 2 2 1 YhjQ protein Zeta_toxin PF06414.7 gi|84488998|ref|YP_447230.1| - 0.0087 15.1 0.2 0.051 12.6 0.1 2.4 2 1 0 2 2 2 1 Zeta toxin PhoH PF02562.11 gi|84488998|ref|YP_447230.1| - 0.0092 15.2 0.0 0.018 14.2 0.0 1.5 1 0 0 1 1 1 1 PhoH-like protein AAA_10 PF12846.2 gi|84488998|ref|YP_447230.1| - 0.015 14.7 0.1 0.03 13.7 0.1 1.6 1 1 0 1 1 1 0 AAA-like domain NB-ARC PF00931.17 gi|84488998|ref|YP_447230.1| - 0.017 14.0 0.1 0.03 13.1 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|84488998|ref|YP_447230.1| - 0.021 14.4 1.7 0.099 12.2 1.2 2.0 1 1 0 1 1 1 0 AAA domain PIF1 PF05970.9 gi|84488998|ref|YP_447230.1| - 0.04 12.8 2.9 2.8 6.7 0.2 2.2 2 0 0 2 2 2 0 PIF1-like helicase ParA PF10609.4 gi|84488998|ref|YP_447230.1| - 0.06 13.2 0.1 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 ParA/MinD ATPase like Rad9_Rad53_bind PF08605.5 gi|84488998|ref|YP_447230.1| - 0.08 12.7 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding ArgK PF03308.11 gi|84488998|ref|YP_447230.1| - 0.13 11.0 0.4 0.61 8.8 0.1 2.2 3 1 0 3 3 3 0 ArgK protein AAA_18 PF13238.1 gi|84488998|ref|YP_447230.1| - 0.2 11.9 0.7 0.65 10.3 0.5 2.0 1 1 0 1 1 1 0 AAA domain MipZ PF09140.6 gi|84488998|ref|YP_447230.1| - 0.22 10.5 1.7 1.2 8.1 0.1 2.4 2 1 1 3 3 3 0 ATPase MipZ NAD_synthase PF02540.12 gi|84488999|ref|YP_447231.1| - 1.1e-85 286.4 0.0 1.3e-85 286.2 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|84488999|ref|YP_447231.1| - 3.6e-06 25.7 0.1 0.0014 17.2 0.0 2.4 2 1 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.16 gi|84488999|ref|YP_447231.1| - 0.00017 21.2 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase Sigma70_r4_2 PF08281.7 gi|84488999|ref|YP_447231.1| - 0.0047 16.3 0.0 0.042 13.3 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 UPF0122 PF04297.9 gi|84488999|ref|YP_447231.1| - 0.0095 15.9 0.2 0.085 12.8 0.1 2.2 2 0 0 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like Phage_terminase PF10668.4 gi|84488999|ref|YP_447231.1| - 0.01 15.5 0.0 2.2 8.0 0.0 2.6 3 0 0 3 3 3 0 Phage terminase small subunit MarR_2 PF12802.2 gi|84488999|ref|YP_447231.1| - 0.018 14.6 0.0 0.065 12.9 0.0 1.8 2 0 0 2 2 2 0 MarR family Sigma70_r4 PF04545.11 gi|84488999|ref|YP_447231.1| - 0.019 14.2 0.0 0.16 11.3 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 Mga PF05043.8 gi|84488999|ref|YP_447231.1| - 0.063 13.5 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 Mga helix-turn-helix domain CENP-B_N PF04218.8 gi|84488999|ref|YP_447231.1| - 0.065 12.6 0.0 0.38 10.1 0.0 2.1 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain TrmB PF01978.14 gi|84488999|ref|YP_447231.1| - 0.09 12.4 0.5 1.1 9.0 0.1 2.5 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.1 gi|84488999|ref|YP_447231.1| - 0.14 11.8 0.0 3.9 7.2 0.0 2.6 3 0 0 3 3 3 0 Homeodomain-like domain Terminase_5 PF06056.7 gi|84488999|ref|YP_447231.1| - 0.15 11.6 0.0 3.5 7.2 0.0 2.4 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) DUF2316 PF10078.4 gi|84488999|ref|YP_447231.1| - 0.16 11.9 0.0 0.8 9.7 0.0 2.2 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2316) tRNA-synt_1 PF00133.17 gi|84489000|ref|YP_447232.1| - 6.4e-69 232.5 8.8 1.6e-65 221.3 6.1 3.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|84489000|ref|YP_447232.1| - 3.7e-24 85.1 14.9 3.9e-10 38.9 0.1 4.4 2 2 1 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|84489000|ref|YP_447232.1| - 4.8e-21 75.1 2.7 4.8e-21 75.1 1.9 2.5 3 0 0 3 3 3 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 gi|84489000|ref|YP_447232.1| - 1.1e-12 47.6 2.4 7.7e-12 44.8 0.1 2.6 1 1 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|84489000|ref|YP_447232.1| - 2.2e-08 33.5 0.8 0.00034 19.8 0.0 3.3 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1d PF00750.14 gi|84489000|ref|YP_447232.1| - 4.8e-05 22.3 1.9 0.017 13.9 0.0 3.9 4 1 0 5 5 5 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.13 gi|84489000|ref|YP_447232.1| - 0.00095 17.9 3.2 0.0093 14.6 0.0 2.9 3 0 0 3 3 3 1 tRNA synthetases class I (K) tRNA-synt_1b PF00579.20 gi|84489000|ref|YP_447232.1| - 0.084 11.9 0.0 0.084 11.9 0.0 2.5 5 0 0 5 5 5 0 tRNA synthetases class I (W and Y) DUF4064 PF13273.1 gi|84489001|ref|YP_447233.1| - 0.0049 16.9 0.4 0.0069 16.4 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) DUF3357 PF11837.3 gi|84489001|ref|YP_447233.1| - 0.0084 15.9 0.2 0.013 15.2 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3357) DUF4199 PF13858.1 gi|84489001|ref|YP_447233.1| - 0.062 13.2 0.3 0.086 12.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Brr6_like_C_C PF10104.4 gi|84489001|ref|YP_447233.1| - 0.09 12.2 2.6 0.098 12.1 0.4 1.9 2 0 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain TrbL PF04610.9 gi|84489001|ref|YP_447233.1| - 0.11 12.1 2.0 0.14 11.8 1.4 1.1 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein DUF4363 PF14276.1 gi|84489001|ref|YP_447233.1| - 0.12 12.1 6.8 0.25 11.0 4.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4363) Folate_carrier PF01770.13 gi|84489001|ref|YP_447233.1| - 0.13 10.7 2.5 0.15 10.5 1.8 1.1 1 0 0 1 1 1 0 Reduced folate carrier Macoilin PF09726.4 gi|84489001|ref|YP_447233.1| - 0.19 10.0 5.9 0.21 9.8 4.1 1.0 1 0 0 1 1 1 0 Transmembrane protein DUF1980 PF09323.5 gi|84489001|ref|YP_447233.1| - 0.19 11.4 5.7 0.25 11.0 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Mtc PF03820.12 gi|84489001|ref|YP_447233.1| - 0.39 9.3 5.5 0.47 9.0 3.8 1.1 1 0 0 1 1 1 0 Tricarboxylate carrier DUF3115 PF11312.3 gi|84489001|ref|YP_447233.1| - 0.8 8.4 4.8 2.4 6.9 3.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3115) HOK_GEF PF01848.11 gi|84489001|ref|YP_447233.1| - 2.2 7.6 6.9 3.6 6.9 4.8 1.3 1 0 0 1 1 1 0 Hok/gef family CbiA PF01656.18 gi|84489002|ref|YP_447234.1| - 1.1e-15 57.5 0.2 2.1e-15 56.6 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain GATase_3 PF07685.9 gi|84489002|ref|YP_447234.1| - 1.6e-13 50.5 0.0 2.7e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.1 gi|84489002|ref|YP_447234.1| - 9.3e-12 44.9 3.7 1.8e-09 37.4 2.5 2.3 1 1 0 1 1 1 1 AAA domain GATase_5 PF13507.1 gi|84489002|ref|YP_447234.1| - 3e-05 23.0 0.0 9.5e-05 21.4 0.0 1.9 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF1611 PF07755.6 gi|84489002|ref|YP_447234.1| - 0.001 17.7 0.0 0.0046 15.6 0.0 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF1611) MobB PF03205.9 gi|84489002|ref|YP_447234.1| - 0.0035 17.0 0.1 3.2 7.4 0.0 2.5 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B SNO PF01174.14 gi|84489002|ref|YP_447234.1| - 0.0043 16.7 0.1 0.01 15.4 0.1 1.7 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|84489002|ref|YP_447234.1| - 0.0043 16.5 0.1 0.013 14.9 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase class-I PMBR PF09373.5 gi|84489002|ref|YP_447234.1| - 0.011 15.6 4.0 0.57 10.2 0.0 3.4 4 0 0 4 4 4 0 Pseudomurein-binding repeat Zeta_toxin PF06414.7 gi|84489002|ref|YP_447234.1| - 0.04 13.0 0.0 0.069 12.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin DJ-1_PfpI PF01965.19 gi|84489002|ref|YP_447234.1| - 0.11 12.0 0.0 0.88 9.0 0.0 2.2 2 0 0 2 2 2 0 DJ-1/PfpI family DHBP_synthase PF00926.14 gi|84489003|ref|YP_447235.1| - 1.3e-69 233.3 0.0 1.4e-69 233.1 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase Sigma_1s PF02454.11 gi|84489004|ref|YP_447236.1| - 0.11 12.2 2.3 0.32 10.7 0.1 2.2 2 1 0 2 2 2 0 Sigma 1s protein CTP-dep_RFKase PF01982.11 gi|84489005|ref|YP_447237.1| - 1.3e-31 108.7 0.1 1.5e-31 108.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF120 HisG PF01634.13 gi|84489006|ref|YP_447238.1| - 3.7e-55 185.9 0.5 4.9e-55 185.5 0.3 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|84489006|ref|YP_447238.1| - 4.2e-26 90.6 0.1 2e-25 88.5 0.1 2.2 2 0 0 2 2 2 1 HisG, C-terminal domain SBP_bac_3 PF00497.15 gi|84489006|ref|YP_447238.1| - 9.5e-05 21.7 0.1 0.00019 20.7 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 FAA_hydrolase PF01557.13 gi|84489007|ref|YP_447239.1| - 3.6e-53 180.2 0.0 4.4e-53 179.9 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FAD_binding_2 PF00890.19 gi|84489008|ref|YP_447240.1| - 2e-92 310.2 1.2 2.4e-92 309.9 0.8 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 gi|84489008|ref|YP_447240.1| - 3.7e-29 101.1 1.6 3.9e-29 101.0 0.2 1.7 2 0 0 2 2 2 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.9 gi|84489008|ref|YP_447240.1| - 4.4e-10 39.7 0.2 0.00097 19.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|84489008|ref|YP_447240.1| - 0.00025 20.0 0.1 0.00055 18.9 0.0 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|84489008|ref|YP_447240.1| - 0.00088 17.8 3.5 0.0099 14.3 0.3 3.1 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.2 gi|84489008|ref|YP_447240.1| - 0.0011 18.1 2.9 0.011 14.7 0.4 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.12 gi|84489008|ref|YP_447240.1| - 0.0013 17.9 2.4 0.24 10.4 0.4 2.5 2 0 0 2 2 2 2 Thi4 family FAD_binding_3 PF01494.14 gi|84489008|ref|YP_447240.1| - 0.051 12.6 0.5 0.12 11.4 0.3 1.6 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.22 gi|84489008|ref|YP_447240.1| - 0.087 13.2 0.7 0.28 11.5 0.5 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|84489008|ref|YP_447240.1| - 0.31 9.8 5.8 0.072 11.9 0.9 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A Amidase PF01425.16 gi|84489009|ref|YP_447241.1| - 2.3e-122 409.0 0.0 2.6e-122 408.8 0.0 1.0 1 0 0 1 1 1 1 Amidase DUF2666 PF10869.3 gi|84489009|ref|YP_447241.1| - 0.31 11.0 6.7 0.5 10.4 2.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) DUF2203 PF09969.4 gi|84489009|ref|YP_447241.1| - 0.79 9.9 3.7 12 6.1 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) URO-D PF01208.12 gi|84489010|ref|YP_447242.1| - 8e-81 271.6 0.4 9.5e-81 271.3 0.3 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF1179 PF06678.6 gi|84489011|ref|YP_447243.1| - 0.047 13.9 0.6 0.096 12.9 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1179) MLIP PF15274.1 gi|84489011|ref|YP_447243.1| - 0.092 12.2 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Muscular LMNA-interacting protein MtaB PF12176.3 gi|84489012|ref|YP_447244.1| - 7.4e-233 773.0 7.9 8.4e-233 772.8 5.5 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit PRAI PF00697.17 gi|84489012|ref|YP_447244.1| - 0.092 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B12-binding_2 PF02607.12 gi|84489013|ref|YP_447245.1| - 2.6e-17 62.6 0.1 5e-17 61.7 0.1 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|84489013|ref|YP_447245.1| - 1.7e-15 56.9 0.1 2.9e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 B12 binding domain CTC1_2 PF15491.1 gi|84489013|ref|YP_447245.1| - 0.11 11.5 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 MtaB PF12176.3 gi|84489014|ref|YP_447246.1| - 8.6e-234 776.1 5.0 9.7e-234 775.9 3.5 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit DUF1825 PF08855.5 gi|84489014|ref|YP_447246.1| - 0.052 13.5 0.8 0.57 10.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1825) B12-binding_2 PF02607.12 gi|84489015|ref|YP_447247.1| - 1.6e-17 63.3 0.1 3.3e-17 62.2 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|84489015|ref|YP_447247.1| - 7.4e-13 48.4 0.1 1.3e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain AAA_25 PF13481.1 gi|84489015|ref|YP_447247.1| - 0.1 11.9 0.0 0.33 10.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain MtaB PF12176.3 gi|84489016|ref|YP_447248.1| - 9.5e-228 756.1 6.0 1.1e-227 756.0 4.2 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit PRAI PF00697.17 gi|84489016|ref|YP_447248.1| - 0.096 12.2 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B12-binding_2 PF02607.12 gi|84489017|ref|YP_447249.1| - 2.6e-17 62.6 0.1 5e-17 61.7 0.1 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|84489017|ref|YP_447249.1| - 1.6e-15 57.0 0.1 3.4e-15 55.9 0.0 1.6 1 1 0 1 1 1 1 B12 binding domain CTC1_2 PF15491.1 gi|84489017|ref|YP_447249.1| - 0.11 11.5 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 DUF4445 PF14574.1 gi|84489018|ref|YP_447250.1| - 3e-115 384.7 4.2 4.4e-115 384.2 2.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4_10 PF13237.1 gi|84489018|ref|YP_447250.1| - 2.1e-05 24.2 8.0 5.2e-05 22.9 5.5 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489018|ref|YP_447250.1| - 2.4e-05 24.6 10.6 6.4e-05 23.2 7.3 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489018|ref|YP_447250.1| - 0.00017 21.7 9.0 0.0039 17.4 7.1 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489018|ref|YP_447250.1| - 0.00023 20.8 12.2 0.012 15.4 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|84489018|ref|YP_447250.1| - 0.00052 19.4 10.4 0.012 15.2 2.5 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489018|ref|YP_447250.1| - 0.0041 16.9 9.7 0.014 15.2 6.8 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489018|ref|YP_447250.1| - 0.011 16.0 5.6 0.02 15.2 0.1 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489018|ref|YP_447250.1| - 0.011 15.6 13.0 0.09 12.7 2.3 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84489018|ref|YP_447250.1| - 0.027 15.2 10.1 0.067 13.9 3.2 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|84489018|ref|YP_447250.1| - 0.039 13.9 11.6 0.099 12.6 2.5 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain FGGY_N PF00370.16 gi|84489018|ref|YP_447250.1| - 0.065 12.5 0.1 0.15 11.3 0.1 1.6 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Fer4_4 PF12800.2 gi|84489018|ref|YP_447250.1| - 0.07 13.4 12.3 2 8.9 2.4 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|84489018|ref|YP_447250.1| - 0.3 11.5 7.6 1 9.8 0.5 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489018|ref|YP_447250.1| - 0.37 11.3 7.5 3.8 8.1 5.4 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84489018|ref|YP_447250.1| - 1.5 9.2 7.7 0.38 11.1 1.6 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84489018|ref|YP_447250.1| - 9.2 7.1 16.5 16 6.3 3.4 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain HAD PF12710.2 gi|84489019|ref|YP_447251.1| - 4.5e-10 40.0 0.1 5.9e-10 39.6 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|84489019|ref|YP_447251.1| - 9.5e-08 32.7 0.0 2.5e-07 31.3 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase TrmB PF01978.14 gi|84489019|ref|YP_447251.1| - 0.007 16.0 0.1 0.02 14.6 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|84489019|ref|YP_447251.1| - 0.12 11.9 0.0 2.1 8.0 0.0 2.7 3 0 0 3 3 3 0 IclR helix-turn-helix domain DapH_N PF08503.5 gi|84489019|ref|YP_447251.1| - 0.2 11.7 1.5 1.2 9.3 0.2 2.6 2 1 1 3 3 3 0 Tetrahydrodipicolinate succinyltransferase N-terminal AAA_5 PF07728.9 gi|84489020|ref|YP_447252.1| - 4.4e-17 62.1 0.0 1.2e-16 60.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|84489020|ref|YP_447252.1| - 3.9e-14 52.3 0.0 4.5e-12 45.7 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 gi|84489020|ref|YP_447252.1| - 4.7e-13 49.4 0.2 3.1e-12 46.8 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|84489020|ref|YP_447252.1| - 4.7e-08 33.2 0.0 2.2e-06 27.7 0.0 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_2 PF07724.9 gi|84489020|ref|YP_447252.1| - 1.1e-07 31.9 0.3 2.2e-07 30.9 0.1 1.7 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.1 gi|84489020|ref|YP_447252.1| - 5.6e-07 29.5 2.1 3.6e-06 26.9 0.6 2.7 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|84489020|ref|YP_447252.1| - 9.1e-07 29.0 0.0 2.2e-06 27.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489020|ref|YP_447252.1| - 1.1e-05 25.7 2.8 3.6e-05 24.0 0.7 2.5 1 1 1 2 2 2 1 AAA domain Sigma54_activat PF00158.21 gi|84489020|ref|YP_447252.1| - 1.1e-05 24.9 0.0 0.062 12.7 0.0 2.2 2 0 0 2 2 2 2 Sigma-54 interaction domain Sigma54_activ_2 PF14532.1 gi|84489020|ref|YP_447252.1| - 1.4e-05 25.1 0.1 0.0012 18.8 0.1 2.5 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_17 PF13207.1 gi|84489020|ref|YP_447252.1| - 1.6e-05 25.7 0.2 6.4e-05 23.7 0.1 2.3 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|84489020|ref|YP_447252.1| - 5.7e-05 22.2 0.1 0.016 14.2 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_19 PF13245.1 gi|84489020|ref|YP_447252.1| - 0.00016 21.3 0.0 0.00052 19.7 0.0 1.8 2 0 0 2 2 1 1 Part of AAA domain Mg_chelatase PF01078.16 gi|84489020|ref|YP_447252.1| - 0.00026 20.2 0.1 0.0031 16.7 0.0 2.1 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI MCM PF00493.18 gi|84489020|ref|YP_447252.1| - 0.00045 19.1 0.6 0.046 12.5 0.1 2.8 2 1 1 3 3 3 1 MCM2/3/5 family DUF2075 PF09848.4 gi|84489020|ref|YP_447252.1| - 0.00058 18.9 0.0 0.00078 18.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) TIP49 PF06068.8 gi|84489020|ref|YP_447252.1| - 0.00068 18.4 0.0 0.03 13.0 0.0 2.3 2 0 0 2 2 2 1 TIP49 C-terminus AAA_11 PF13086.1 gi|84489020|ref|YP_447252.1| - 0.00073 19.1 0.5 0.0014 18.2 0.4 1.6 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.17 gi|84489020|ref|YP_447252.1| - 0.0028 17.8 0.0 0.012 15.7 0.0 2.2 1 1 0 1 1 1 1 RNA helicase IstB_IS21 PF01695.12 gi|84489020|ref|YP_447252.1| - 0.0032 16.9 0.0 0.0084 15.5 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.7 gi|84489020|ref|YP_447252.1| - 0.0034 17.0 0.0 0.051 13.2 0.0 2.3 2 0 0 2 2 2 1 NACHT domain Zeta_toxin PF06414.7 gi|84489020|ref|YP_447252.1| - 0.0042 16.1 0.0 0.0088 15.1 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin NTPase_1 PF03266.10 gi|84489020|ref|YP_447252.1| - 0.0046 16.6 0.1 0.12 12.0 0.0 2.5 1 1 0 1 1 1 1 NTPase Parvo_NS1 PF01057.12 gi|84489020|ref|YP_447252.1| - 0.0074 15.1 0.0 0.03 13.2 0.0 2.0 3 0 0 3 3 3 1 Parvovirus non-structural protein NS1 KTI12 PF08433.5 gi|84489020|ref|YP_447252.1| - 0.01 15.1 0.1 0.8 8.8 0.0 2.3 2 0 0 2 2 2 1 Chromatin associated protein KTI12 T2SE PF00437.15 gi|84489020|ref|YP_447252.1| - 0.019 13.8 0.0 0.034 13.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.1 gi|84489020|ref|YP_447252.1| - 0.019 14.5 0.0 0.039 13.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|84489020|ref|YP_447252.1| - 0.022 15.0 0.0 0.057 13.7 0.0 2.1 1 1 0 1 1 1 0 ABC transporter NB-ARC PF00931.17 gi|84489020|ref|YP_447252.1| - 0.022 13.6 0.0 0.057 12.2 0.0 1.7 1 1 0 1 1 1 0 NB-ARC domain AAA_28 PF13521.1 gi|84489020|ref|YP_447252.1| - 0.054 13.4 0.0 0.1 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|84489020|ref|YP_447252.1| - 0.072 12.9 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|84489020|ref|YP_447252.1| - 0.086 12.4 0.0 0.18 11.4 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 KaiC PF06745.8 gi|84489020|ref|YP_447252.1| - 0.09 11.8 1.1 1 8.4 0.0 2.7 3 0 0 3 3 3 0 KaiC DUF362 PF04015.7 gi|84489021|ref|YP_447253.1| - 1.9e-28 99.3 0.0 3.4e-28 98.5 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|84489021|ref|YP_447253.1| - 1.3e-11 43.6 17.4 3.5e-07 29.5 3.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489021|ref|YP_447253.1| - 3.8e-11 43.2 24.5 3.6e-08 33.6 9.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489021|ref|YP_447253.1| - 6.6e-10 38.7 24.0 5e-07 29.4 9.4 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489021|ref|YP_447253.1| - 5.3e-09 35.5 17.1 3.2e-06 26.7 3.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489021|ref|YP_447253.1| - 2.9e-08 33.3 24.6 7.9e-06 25.5 9.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489021|ref|YP_447253.1| - 3.6e-08 34.0 10.9 0.001 19.7 1.1 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84489021|ref|YP_447253.1| - 2e-07 30.4 14.2 0.00017 21.3 1.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84489021|ref|YP_447253.1| - 2.6e-07 30.7 14.1 5.7e-07 29.7 9.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|84489021|ref|YP_447253.1| - 8.7e-07 28.1 0.4 1.5e-06 27.3 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) Fer4_4 PF12800.2 gi|84489021|ref|YP_447253.1| - 4e-06 26.7 11.7 0.014 15.6 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84489021|ref|YP_447253.1| - 1.5e-05 24.9 6.3 0.018 15.0 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489021|ref|YP_447253.1| - 0.0011 19.3 13.6 0.097 13.1 1.1 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489021|ref|YP_447253.1| - 0.0024 18.1 11.3 0.15 12.4 1.3 2.5 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|84489021|ref|YP_447253.1| - 0.017 15.0 3.5 0.033 14.0 2.4 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489021|ref|YP_447253.1| - 0.028 14.9 6.5 0.24 12.0 0.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84489021|ref|YP_447253.1| - 0.049 14.2 19.8 0.46 11.1 4.1 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84489021|ref|YP_447253.1| - 0.94 9.9 15.3 1.2 9.5 1.8 2.8 3 0 0 3 3 2 0 4Fe-4S single cluster domain PadR PF03551.9 gi|84489022|ref|YP_447254.1| - 1.6e-14 53.4 0.1 2.1e-14 53.0 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|84489022|ref|YP_447254.1| - 4e-05 23.3 0.3 7.8e-05 22.4 0.2 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|84489022|ref|YP_447254.1| - 0.00067 19.6 0.2 0.0011 18.9 0.1 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|84489022|ref|YP_447254.1| - 0.0039 16.8 0.0 0.0059 16.2 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|84489022|ref|YP_447254.1| - 0.0067 16.1 0.0 0.014 15.0 0.0 1.6 1 0 0 1 1 1 1 MarR family DUF815 PF05673.8 gi|84489022|ref|YP_447254.1| - 0.03 13.2 0.0 0.035 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF3116 PF11313.3 gi|84489022|ref|YP_447254.1| - 0.05 13.2 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) HTH_Crp_2 PF13545.1 gi|84489022|ref|YP_447254.1| - 0.056 13.2 0.0 0.075 12.8 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF387 PF04079.11 gi|84489022|ref|YP_447254.1| - 0.07 12.4 0.0 0.094 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative transcriptional regulators (Ypuh-like) HxlR PF01638.12 gi|84489022|ref|YP_447254.1| - 0.076 12.6 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Replic_Relax PF13814.1 gi|84489022|ref|YP_447254.1| - 0.082 12.7 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation FUR PF01475.14 gi|84489022|ref|YP_447254.1| - 0.092 12.6 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_IclR PF09339.5 gi|84489022|ref|YP_447254.1| - 0.14 11.7 0.0 0.3 10.7 0.0 1.5 2 0 0 2 2 2 0 IclR helix-turn-helix domain ABC_tran PF00005.22 gi|84489023|ref|YP_447255.1| - 6.3e-30 104.2 0.3 1.9e-29 102.6 0.0 1.8 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|84489023|ref|YP_447255.1| - 1.4e-15 58.0 0.3 5.9e-10 39.5 0.0 2.5 2 1 1 3 3 3 2 AAA domain DUF4162 PF13732.1 gi|84489023|ref|YP_447255.1| - 6.7e-07 29.7 0.7 1.9e-06 28.2 0.1 2.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_23 PF13476.1 gi|84489023|ref|YP_447255.1| - 0.00012 22.5 2.7 0.00029 21.2 1.9 1.7 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 gi|84489023|ref|YP_447255.1| - 0.0019 16.7 3.5 0.013 13.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|84489023|ref|YP_447255.1| - 0.0033 17.5 0.2 0.21 11.7 0.0 2.8 2 1 0 2 2 2 1 AAA domain TehB PF03848.9 gi|84489023|ref|YP_447255.1| - 0.025 13.7 1.0 0.051 12.7 0.1 1.9 2 0 0 2 2 2 0 Tellurite resistance protein TehB SMC_N PF02463.14 gi|84489023|ref|YP_447255.1| - 0.027 13.6 4.2 0.25 10.5 0.8 2.8 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_11 PF13086.1 gi|84489023|ref|YP_447255.1| - 0.029 13.9 0.4 0.16 11.5 0.3 2.1 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|84489023|ref|YP_447255.1| - 0.03 13.7 1.5 0.076 12.4 0.8 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Rootletin PF15035.1 gi|84489023|ref|YP_447255.1| - 0.048 13.6 0.5 0.083 12.8 0.3 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion SbcCD_C PF13558.1 gi|84489023|ref|YP_447255.1| - 0.057 13.3 0.0 0.44 10.4 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.1 gi|84489023|ref|YP_447255.1| - 0.072 13.0 0.0 0.77 9.7 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_1 PF03029.12 gi|84489023|ref|YP_447255.1| - 0.073 12.5 2.6 0.97 8.9 0.1 2.7 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein DUF1090 PF06476.7 gi|84489023|ref|YP_447255.1| - 0.077 12.6 1.1 0.14 11.7 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) DUF2570 PF10828.3 gi|84489023|ref|YP_447255.1| - 0.9 9.1 4.5 0.53 9.9 1.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2570) AAA PF00004.24 gi|84489023|ref|YP_447255.1| - 1.3 9.2 5.7 62 3.7 4.0 3.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC2_membrane_3 PF12698.2 gi|84489024|ref|YP_447256.1| - 7.2e-49 166.6 21.8 8.2e-49 166.4 15.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|84489024|ref|YP_447256.1| - 2.6e-36 124.7 26.0 8.4e-34 116.5 11.4 2.9 3 0 0 3 3 3 2 ABC-2 type transporter ABC2_membrane_2 PF12679.2 gi|84489024|ref|YP_447256.1| - 7.9e-24 83.9 13.3 1.2e-23 83.3 9.2 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein CcmB PF03379.8 gi|84489024|ref|YP_447256.1| - 2.2e-05 23.7 10.4 2.2e-05 23.7 7.2 2.2 2 1 0 2 2 2 1 CcmB protein PTS_IIA PF02255.11 gi|84489024|ref|YP_447256.1| - 0.071 12.9 0.1 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIA subunit PQQ_3 PF13570.1 gi|84489025|ref|YP_447257.1| - 2.4e-72 237.3 25.9 6.1e-11 42.2 0.1 8.1 8 0 0 8 8 8 8 PQQ-like domain PQQ_2 PF13360.1 gi|84489025|ref|YP_447257.1| - 6e-56 189.5 15.2 5e-25 88.3 2.3 3.3 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.16 gi|84489025|ref|YP_447257.1| - 8.1e-51 167.1 23.4 3.3e-11 42.1 0.1 8.4 9 0 0 9 9 9 7 PQQ enzyme repeat MMS1_N PF10433.4 gi|84489025|ref|YP_447257.1| - 5.2e-05 21.5 1.4 0.53 8.3 0.0 3.8 2 1 1 4 4 4 3 Mono-functional DNA-alkylating methyl methanesulfonate N-term PsbP PF01789.11 gi|84489025|ref|YP_447257.1| - 0.00013 21.4 0.7 1.1 8.7 0.0 4.0 4 1 0 4 4 4 2 PsbP Rep_trans PF02486.14 gi|84489025|ref|YP_447257.1| - 0.029 13.8 0.9 1.9 7.9 0.0 2.9 1 1 2 3 3 3 0 Replication initiation factor Alba PF01918.16 gi|84489026|ref|YP_447258.1| - 5.6e-19 67.5 0.9 8.2e-19 66.9 0.6 1.3 1 1 0 1 1 1 1 Alba Rpp20 PF12328.3 gi|84489026|ref|YP_447258.1| - 0.0016 18.0 0.2 0.0017 18.0 0.1 1.3 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P HMGL-like PF00682.14 gi|84489027|ref|YP_447259.1| - 3.4e-80 269.1 0.2 6e-80 268.3 0.2 1.3 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|84489027|ref|YP_447259.1| - 5.4e-33 113.6 0.7 1.5e-32 112.1 0.3 1.9 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain Trp_syntA PF00290.15 gi|84489027|ref|YP_447259.1| - 0.028 12.9 0.0 0.072 11.6 0.0 1.6 1 0 0 1 1 1 0 Tryptophan synthase alpha chain DUF3929 PF13066.1 gi|84489027|ref|YP_447259.1| - 0.23 11.2 2.3 0.32 10.7 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3929) Amidohydro_1 PF01979.15 gi|84489028|ref|YP_447260.1| - 2.7e-61 208.0 0.9 3.3e-61 207.7 0.6 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|84489028|ref|YP_447260.1| - 5.8e-13 48.4 0.3 2.1e-12 46.6 0.1 2.1 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|84489028|ref|YP_447260.1| - 2.3e-12 46.8 0.0 2.4e-10 40.2 0.0 2.2 2 1 0 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|84489028|ref|YP_447260.1| - 3.5e-12 46.9 0.0 2e-08 34.6 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase A_deaminase PF00962.17 gi|84489028|ref|YP_447260.1| - 7.8e-06 25.0 0.4 1.8e-05 23.8 0.2 1.6 1 1 0 1 1 1 1 Adenosine/AMP deaminase TatD_DNase PF01026.16 gi|84489028|ref|YP_447260.1| - 0.026 13.7 0.3 0.035 13.3 0.2 1.3 1 0 0 1 1 1 0 TatD related DNase Phage_integrase PF00589.17 gi|84489029|ref|YP_447261.1| - 2.6e-09 36.9 0.2 4.2e-09 36.3 0.1 1.3 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|84489029|ref|YP_447261.1| - 9.3e-07 29.0 1.1 9.3e-07 29.0 0.8 2.4 3 0 0 3 3 3 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|84489029|ref|YP_447261.1| - 0.0018 18.3 0.0 0.0051 16.9 0.0 1.7 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain DUF4012 PF13196.1 gi|84489030|ref|YP_447262.1| - 1.5e-32 112.7 0.0 2.1e-32 112.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4012) DUF3139 PF11337.3 gi|84489030|ref|YP_447262.1| - 0.34 11.2 2.6 1.6 9.0 1.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Glyco_trans_1_2 PF13524.1 gi|84489031|ref|YP_447263.1| - 3.8e-17 62.3 0.1 1.5e-15 57.2 0.0 3.3 4 0 0 4 4 4 1 Glycosyl transferases group 1 Glyco_tranf_2_5 PF13712.1 gi|84489031|ref|YP_447263.1| - 2.5e-12 46.5 1.9 5.3e-12 45.4 1.3 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family Glycos_transf_2 PF00535.21 gi|84489031|ref|YP_447263.1| - 1.3e-11 44.4 0.3 4.2e-11 42.8 0.2 1.9 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489031|ref|YP_447263.1| - 2.8e-11 43.0 6.9 2.8e-11 43.0 4.8 1.8 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|84489031|ref|YP_447263.1| - 1.1e-07 31.9 0.0 2e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_1_4 PF13692.1 gi|84489031|ref|YP_447263.1| - 6.5e-05 23.1 0.0 0.00035 20.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 DUF3880 PF12996.2 gi|84489031|ref|YP_447263.1| - 0.01 15.7 0.4 0.03 14.2 0.0 2.0 2 0 0 2 2 2 0 DUF based on E. rectale Gene description (DUF3880) TMF_TATA_bd PF12325.3 gi|84489031|ref|YP_447263.1| - 0.03 14.0 2.2 0.49 10.1 0.0 2.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding RNA_pol_Rpb2_45 PF10385.4 gi|84489031|ref|YP_447263.1| - 0.066 13.0 0.0 0.19 11.5 0.0 1.8 1 0 0 1 1 1 0 RNA polymerase beta subunit external 1 domain Glyco_transf_21 PF13506.1 gi|84489031|ref|YP_447263.1| - 0.097 11.9 0.0 0.22 10.7 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 ABC2_membrane PF01061.19 gi|84489032|ref|YP_447264.1| - 3.5e-21 75.3 31.0 3.5e-21 75.3 21.5 2.0 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|84489032|ref|YP_447264.1| - 0.23 10.4 44.3 0.58 9.1 30.7 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2627 PF11118.3 gi|84489032|ref|YP_447264.1| - 0.69 10.0 17.2 0.27 11.3 1.3 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2627) ABC_tran PF00005.22 gi|84489033|ref|YP_447265.1| - 4.2e-22 78.9 0.1 3.1e-21 76.0 0.1 2.1 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489033|ref|YP_447265.1| - 5.1e-08 33.2 5.5 0.0003 20.8 0.5 2.6 1 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|84489033|ref|YP_447265.1| - 1.7e-05 24.2 0.1 3.4e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|84489033|ref|YP_447265.1| - 0.0024 18.2 0.2 0.0048 17.2 0.1 1.5 1 0 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|84489033|ref|YP_447265.1| - 0.0048 16.1 0.0 0.0086 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|84489033|ref|YP_447265.1| - 0.0079 15.2 0.7 0.11 11.5 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain Miro PF08477.8 gi|84489033|ref|YP_447265.1| - 0.016 15.6 0.4 0.065 13.7 0.0 2.0 2 0 0 2 2 2 0 Miro-like protein AAA PF00004.24 gi|84489033|ref|YP_447265.1| - 0.02 15.1 0.5 0.14 12.3 0.4 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.1 gi|84489033|ref|YP_447265.1| - 0.06 11.7 0.0 0.084 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.14 gi|84489033|ref|YP_447265.1| - 0.062 12.5 1.4 0.62 9.2 0.3 2.3 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain MobB PF03205.9 gi|84489033|ref|YP_447265.1| - 0.12 12.1 0.4 0.28 10.8 0.1 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_28 PF13521.1 gi|84489033|ref|YP_447265.1| - 0.14 12.1 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|84489033|ref|YP_447265.1| - 0.18 11.7 0.6 0.29 11.0 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_17 PF13207.1 gi|84489033|ref|YP_447265.1| - 0.19 12.5 0.8 0.3 11.8 0.3 2.0 2 1 0 2 2 2 0 AAA domain Glycos_transf_2 PF00535.21 gi|84489034|ref|YP_447266.1| - 1.8e-26 92.8 0.1 2.6e-26 92.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489034|ref|YP_447266.1| - 4.6e-18 65.8 0.0 6.3e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489034|ref|YP_447266.1| - 3.5e-15 55.8 3.8 6.5e-15 54.9 2.6 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|84489034|ref|YP_447266.1| - 1e-09 38.4 0.1 1.5e-09 37.8 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 NTP_transferase PF00483.18 gi|84489034|ref|YP_447266.1| - 4.7e-05 22.7 0.7 6.6e-05 22.3 0.5 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Glyco_tranf_2_4 PF13704.1 gi|84489034|ref|YP_447266.1| - 5.5e-05 23.4 0.0 9.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_5 PF13712.1 gi|84489034|ref|YP_447266.1| - 7.2e-05 22.1 5.0 0.033 13.4 2.0 3.0 1 1 1 2 2 2 2 Glycosyltransferase like family Glyco_transf_64 PF09258.5 gi|84489034|ref|YP_447266.1| - 0.0038 16.4 0.9 0.0058 15.8 0.6 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 64 domain DUF2101 PF09874.4 gi|84489034|ref|YP_447266.1| - 0.028 13.9 2.6 0.23 10.9 1.0 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2101) DUF1593 PF07632.6 gi|84489034|ref|YP_447266.1| - 0.072 12.3 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) Glyco_tranf_2_3 PF13641.1 gi|84489035|ref|YP_447267.1| - 1e-20 74.5 0.0 1.4e-20 74.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.21 gi|84489035|ref|YP_447267.1| - 1.4e-20 73.6 3.4 1.5e-20 73.5 1.2 1.8 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489035|ref|YP_447267.1| - 2.5e-11 43.1 4.2 3.5e-06 26.3 0.5 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|84489035|ref|YP_447267.1| - 1e-10 41.2 0.5 3.3e-10 39.5 0.2 2.0 1 1 1 2 2 2 1 Glycosyltransferase like family Glyco_trans_2_3 PF13632.1 gi|84489035|ref|YP_447267.1| - 1.1e-05 25.1 0.0 3.6e-05 23.5 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_7C PF02709.9 gi|84489035|ref|YP_447267.1| - 0.002 17.5 0.1 0.0046 16.3 0.0 1.6 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_transf_21 PF13506.1 gi|84489035|ref|YP_447267.1| - 0.0089 15.3 0.0 0.061 12.6 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 21 Bac_transf PF02397.11 gi|84489036|ref|YP_447268.1| - 7.7e-74 246.8 0.1 1.6e-73 245.8 0.0 1.6 1 0 0 1 1 1 1 Bacterial sugar transferase CoA_binding_3 PF13727.1 gi|84489036|ref|YP_447268.1| - 2.3e-19 69.9 0.4 2.3e-19 69.9 0.3 2.1 1 1 1 2 2 2 1 CoA-binding domain PMT_2 PF13231.1 gi|84489037|ref|YP_447269.1| - 0.0061 16.4 23.4 0.0061 16.4 16.2 3.3 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF3488 PF11992.3 gi|84489037|ref|YP_447269.1| - 8 5.0 10.2 17 3.9 7.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) UDPG_MGDP_dh_N PF03721.9 gi|84489038|ref|YP_447270.1| - 6.9e-65 217.8 1.0 1.1e-64 217.2 0.7 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|84489038|ref|YP_447270.1| - 1.3e-35 121.4 0.0 3e-35 120.3 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|84489038|ref|YP_447270.1| - 1.2e-32 112.2 0.4 6.6e-31 106.6 0.1 3.2 3 1 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_Gly3P_dh_N PF01210.18 gi|84489038|ref|YP_447270.1| - 2.6e-07 30.5 0.0 2.8e-06 27.1 0.0 2.7 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.22 gi|84489038|ref|YP_447270.1| - 0.0012 19.1 1.5 0.03 14.7 0.1 3.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.10 gi|84489038|ref|YP_447270.1| - 0.0017 18.2 1.8 2 8.2 0.0 3.5 4 0 0 4 4 4 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf1 PF05758.7 gi|84489038|ref|YP_447270.1| - 0.0026 15.5 0.1 0.0039 15.0 0.1 1.2 1 0 0 1 1 1 1 Ycf1 2-Hacid_dh_C PF02826.14 gi|84489038|ref|YP_447270.1| - 0.0034 16.5 0.1 0.83 8.7 0.0 2.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|84489038|ref|YP_447270.1| - 0.012 15.2 0.0 0.069 12.7 0.0 2.3 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|84489038|ref|YP_447270.1| - 0.012 15.0 0.0 0.026 13.9 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.1 gi|84489038|ref|YP_447270.1| - 0.015 15.5 0.5 2.3 8.5 0.0 3.1 2 1 0 2 2 2 0 Putative NAD(P)-binding Ldh_1_N PF00056.18 gi|84489038|ref|YP_447270.1| - 0.1 12.3 1.2 49 3.7 0.0 3.6 3 0 0 3 3 3 0 lactate/malate dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|84489038|ref|YP_447270.1| - 0.14 11.1 0.0 0.22 10.5 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.13 gi|84489038|ref|YP_447270.1| - 0.61 10.0 4.5 14 5.6 0.1 3.3 3 1 0 3 3 3 0 TrkA-N domain DUF1616 PF07760.6 gi|84489039|ref|YP_447271.1| - 1.7e-56 191.4 35.3 1.5e-53 181.7 10.4 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1616) DUF3487 PF11990.3 gi|84489039|ref|YP_447271.1| - 0.00076 18.8 2.8 0.00076 18.8 1.9 3.5 3 2 1 5 5 5 1 Protein of unknown function (DUF3487) DUF1980 PF09323.5 gi|84489039|ref|YP_447271.1| - 0.0027 17.4 4.0 0.0027 17.4 2.8 2.5 3 0 0 3 3 3 1 Domain of unknown function (DUF1980) SUN PF03856.8 gi|84489039|ref|YP_447271.1| - 0.038 13.2 0.4 0.066 12.4 0.3 1.4 1 0 0 1 1 1 0 Beta-glucosidase (SUN family) DUF4468 PF14730.1 gi|84489039|ref|YP_447271.1| - 0.039 13.6 5.0 0.041 13.5 0.8 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4468) with TBP-like fold FixG_C PF11614.3 gi|84489039|ref|YP_447271.1| - 0.068 13.2 0.6 0.068 13.2 0.4 1.8 2 0 0 2 2 2 0 IG-like fold at C-terminal of FixG, putative oxidoreductase Claudin_2 PF13903.1 gi|84489039|ref|YP_447271.1| - 0.32 10.6 0.0 0.32 10.6 0.0 3.8 2 2 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction Bax1-I PF01027.15 gi|84489039|ref|YP_447271.1| - 0.76 9.3 38.8 8.4 5.9 14.2 2.7 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF4199 PF13858.1 gi|84489039|ref|YP_447271.1| - 2.1 8.2 33.9 0.025 14.4 2.3 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF4199) DUF916 PF06030.7 gi|84489039|ref|YP_447271.1| - 2.7 7.8 10.1 2.3 8.0 1.3 3.0 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF916) Glycos_transf_2 PF00535.21 gi|84489040|ref|YP_447272.1| - 6.8e-45 152.7 18.1 1.1e-38 132.5 1.8 4.1 4 0 0 4 4 4 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489040|ref|YP_447272.1| - 8.5e-15 54.5 1.6 8.5e-15 54.5 1.1 3.0 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|84489040|ref|YP_447272.1| - 1.5e-12 47.8 0.0 7.6e-12 45.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489040|ref|YP_447272.1| - 0.0046 17.2 0.0 0.023 15.0 0.0 2.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|84489040|ref|YP_447272.1| - 0.013 14.7 0.0 4 6.6 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase family 21 Lipid_DES PF08557.5 gi|84489040|ref|YP_447272.1| - 0.056 12.6 0.4 0.16 11.2 0.1 1.8 2 0 0 2 2 2 0 Sphingolipid Delta4-desaturase (DES) AflR PF08493.5 gi|84489040|ref|YP_447272.1| - 0.16 10.9 0.0 0.26 10.2 0.0 1.2 1 0 0 1 1 1 0 Aflatoxin regulatory protein Spore_YhcN_YlaJ PF09580.5 gi|84489041|ref|YP_447273.1| - 0.015 15.4 0.6 0.018 15.1 0.4 1.2 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LT-IIB PF06453.6 gi|84489041|ref|YP_447273.1| - 0.026 14.2 7.3 0.19 11.4 1.8 2.2 1 1 0 2 2 2 0 Type II heat-labile enterotoxin , B subunit (LT-IIB) DUF3249 PF11615.3 gi|84489041|ref|YP_447273.1| - 0.11 12.2 0.4 0.22 11.2 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3249) TMEMspv1-c74-12 PF11044.3 gi|84489041|ref|YP_447273.1| - 5.9 6.5 8.0 9.7 5.8 3.0 2.3 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein UDPG_MGDP_dh_N PF03721.9 gi|84489042|ref|YP_447274.1| - 1.8e-53 180.6 0.3 3.9e-53 179.5 0.2 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|84489042|ref|YP_447274.1| - 2.1e-25 88.7 0.0 6.2e-25 87.2 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|84489042|ref|YP_447274.1| - 3e-25 88.4 0.7 8.2e-25 87.0 0.2 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3HCDH_N PF02737.13 gi|84489042|ref|YP_447274.1| - 5.7e-06 26.0 0.0 1.1e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|84489042|ref|YP_447274.1| - 2.2e-05 24.2 0.2 0.00042 20.0 0.0 2.8 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.22 gi|84489042|ref|YP_447274.1| - 0.00018 21.8 0.5 0.0012 19.1 0.1 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.10 gi|84489042|ref|YP_447274.1| - 0.00027 20.8 0.0 0.002 18.0 0.0 2.4 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.11 gi|84489042|ref|YP_447274.1| - 0.0027 17.1 0.0 0.006 16.0 0.0 1.7 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Methyltransf_18 PF12847.2 gi|84489042|ref|YP_447274.1| - 0.0099 16.4 0.0 0.055 14.0 0.0 2.2 2 1 1 3 3 3 1 Methyltransferase domain TrkA_N PF02254.13 gi|84489042|ref|YP_447274.1| - 0.011 15.7 0.1 0.071 13.1 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain Methyltransf_31 PF13847.1 gi|84489042|ref|YP_447274.1| - 0.011 15.3 0.2 0.04 13.4 0.0 2.1 2 1 0 2 2 2 0 Methyltransferase domain AlaDh_PNT_C PF01262.16 gi|84489042|ref|YP_447274.1| - 0.046 13.2 0.0 0.24 10.9 0.0 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.14 gi|84489042|ref|YP_447274.1| - 0.072 12.2 0.0 0.17 11.0 0.0 1.7 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OrfB_IS605 PF01385.14 gi|84489042|ref|YP_447274.1| - 0.099 12.0 0.2 0.69 9.2 0.1 2.1 2 0 0 2 2 2 0 Probable transposase Glycos_transf_2 PF00535.21 gi|84489043|ref|YP_447275.1| - 2.1e-29 102.3 0.4 2.1e-29 102.3 0.3 3.0 3 0 0 3 3 3 1 Glycosyl transferase family 2 Glyco_trans_1_2 PF13524.1 gi|84489043|ref|YP_447275.1| - 2.1e-10 40.7 0.0 5.9e-10 39.2 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tranf_2_3 PF13641.1 gi|84489043|ref|YP_447275.1| - 1e-06 28.7 0.0 2e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF3880 PF12996.2 gi|84489043|ref|YP_447275.1| - 2.8e-05 23.9 0.4 2.8e-05 23.9 0.3 2.4 2 0 0 2 2 2 1 DUF based on E. rectale Gene description (DUF3880) Glyco_tranf_2_4 PF13704.1 gi|84489043|ref|YP_447275.1| - 0.00022 21.5 0.7 0.0073 16.6 0.0 3.0 3 0 0 3 3 3 1 Glycosyl transferase family 2 RapA_C PF12137.3 gi|84489044|ref|YP_447276.1| - 0.77 8.5 6.3 0.77 8.5 2.9 1.8 1 1 1 2 2 2 0 RNA polymerase recycling family C-terminal Epimerase_2 PF02350.14 gi|84489045|ref|YP_447277.1| - 3e-112 374.8 0.1 3.5e-112 374.5 0.1 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.1 gi|84489045|ref|YP_447277.1| - 0.00027 20.7 0.1 0.00087 19.1 0.0 1.9 1 0 0 1 1 1 1 Glycosyl transferase 4-like MGDG_synth PF06925.6 gi|84489045|ref|YP_447277.1| - 0.17 11.7 3.3 0.23 11.3 0.0 2.6 3 0 0 3 3 3 0 Monogalactosyldiacylglycerol (MGDG) synthase Glycos_transf_2 PF00535.21 gi|84489046|ref|YP_447278.1| - 3.7e-35 121.0 5.6 3.8e-35 121.0 3.0 1.7 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489046|ref|YP_447278.1| - 7e-13 48.2 1.4 7e-13 48.2 1.0 2.0 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|84489046|ref|YP_447278.1| - 7.4e-10 39.0 0.0 1.2e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489046|ref|YP_447278.1| - 0.00013 22.2 0.1 0.00036 20.8 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_trans_1_4 PF13692.1 gi|84489047|ref|YP_447279.1| - 0.0054 16.8 0.0 0.011 15.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 FUN14 PF04930.10 gi|84489047|ref|YP_447279.1| - 0.53 10.5 1.6 1.8 8.8 1.1 1.9 1 0 0 1 1 1 0 FUN14 family Glycos_transf_2 PF00535.21 gi|84489048|ref|YP_447280.1| - 1.4e-54 184.2 11.6 4.4e-40 137.1 1.2 2.8 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489048|ref|YP_447280.1| - 6.2e-16 58.3 14.4 2e-13 50.0 0.5 4.1 4 2 1 5 5 5 2 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|84489048|ref|YP_447280.1| - 1.9e-13 50.7 0.0 6.9e-11 42.3 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489048|ref|YP_447280.1| - 0.00054 20.2 1.5 0.0024 18.1 0.0 2.7 3 0 0 3 3 3 1 Glycosyl transferase family 2 Tropomyosin PF00261.15 gi|84489048|ref|YP_447280.1| - 0.0011 18.1 64.9 0.0029 16.7 2.7 2.5 1 1 1 2 2 2 2 Tropomyosin DUF3552 PF12072.3 gi|84489048|ref|YP_447280.1| - 0.0071 15.5 76.8 0.049 12.8 13.6 4.5 1 1 3 4 4 4 2 Domain of unknown function (DUF3552) Reo_sigmaC PF04582.7 gi|84489048|ref|YP_447280.1| - 0.12 11.5 11.2 0.81 8.8 1.8 2.6 1 1 1 2 2 2 0 Reovirus sigma C capsid protein TruD PF01142.13 gi|84489049|ref|YP_447281.1| - 2e-120 401.9 0.0 2.3e-120 401.7 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Tautomerase_3 PF14832.1 gi|84489049|ref|YP_447281.1| - 0.066 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme DUF2610 PF11020.3 gi|84489049|ref|YP_447281.1| - 0.072 12.8 0.1 1.1 9.1 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF2610) Podoplanin PF05808.6 gi|84489050|ref|YP_447282.1| - 0.014 14.9 0.2 0.018 14.6 0.2 1.2 1 0 0 1 1 1 0 Podoplanin DUF948 PF06103.6 gi|84489050|ref|YP_447282.1| - 0.17 11.7 1.7 0.25 11.2 1.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Presenilin PF01080.12 gi|84489050|ref|YP_447282.1| - 0.27 10.0 1.6 0.31 9.8 1.1 1.1 1 0 0 1 1 1 0 Presenilin GLF PF03275.8 gi|84489051|ref|YP_447283.1| - 1.1e-84 282.9 10.5 1.1e-84 282.9 7.3 1.9 2 0 0 2 2 2 1 UDP-galactopyranose mutase NAD_binding_8 PF13450.1 gi|84489051|ref|YP_447283.1| - 5.5e-18 64.7 0.0 1.7e-17 63.1 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|84489051|ref|YP_447283.1| - 0.00052 20.3 0.1 0.0019 18.5 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|84489051|ref|YP_447283.1| - 0.001 17.9 0.0 0.0027 16.6 0.0 1.6 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.14 gi|84489051|ref|YP_447283.1| - 0.0012 17.9 0.0 0.0019 17.3 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.19 gi|84489051|ref|YP_447283.1| - 0.0027 16.8 0.0 0.0044 16.1 0.0 1.3 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Thi4 PF01946.12 gi|84489051|ref|YP_447283.1| - 0.016 14.3 0.0 0.027 13.5 0.0 1.3 1 0 0 1 1 1 0 Thi4 family DAO PF01266.19 gi|84489051|ref|YP_447283.1| - 0.03 13.2 0.0 0.043 12.7 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|84489051|ref|YP_447283.1| - 0.044 13.6 0.0 0.085 12.7 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|84489051|ref|YP_447283.1| - 0.055 13.5 0.0 0.095 12.7 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase E1-E2_ATPase PF00122.15 gi|84489052|ref|YP_447284.1| - 9.5e-57 191.6 2.8 9.5e-57 191.6 2.0 2.9 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|84489052|ref|YP_447284.1| - 3.4e-38 132.2 0.0 5.3e-38 131.5 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.21 gi|84489052|ref|YP_447284.1| - 1.7e-24 85.7 12.0 3.9e-13 49.3 1.3 3.0 3 0 0 3 3 3 2 Heavy-metal-associated domain HAD PF12710.2 gi|84489052|ref|YP_447284.1| - 3.2e-13 50.2 0.0 1e-12 48.6 0.0 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PUA_2 PF14306.1 gi|84489052|ref|YP_447284.1| - 0.0019 17.6 0.3 0.92 8.9 0.1 2.6 2 0 0 2 2 2 2 PUA-like domain DUF788 PF05620.6 gi|84489052|ref|YP_447284.1| - 0.0026 17.6 1.7 0.55 10.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF788) DUF3213 PF11491.3 gi|84489052|ref|YP_447284.1| - 0.46 10.3 12.6 0.24 11.2 0.1 4.5 4 1 1 5 5 5 0 Protein of unknown function (DUF3213) PrgI PF12666.2 gi|84489052|ref|YP_447284.1| - 4.8 7.3 11.6 4.4 7.5 0.1 3.1 3 0 0 3 3 3 0 PrgI family protein DUF126 PF01989.11 gi|84489053|ref|YP_447285.1| - 2e-38 129.9 0.2 2.8e-38 129.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 Tn7_TnsC_Int PF11426.3 gi|84489054|ref|YP_447286.1| - 0.0073 16.0 0.1 28 4.5 0.0 3.6 3 0 0 3 3 3 3 Tn7 transposition regulator TnsC DUF2099 PF09872.4 gi|84489055|ref|YP_447287.1| - 9.3e-104 346.0 0.2 1.1e-103 345.8 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) ThiC PF01964.13 gi|84489056|ref|YP_447288.1| - 4.2e-195 648.1 4.4 4.8e-195 647.9 3.1 1.0 1 0 0 1 1 1 1 ThiC family ADH_zinc_N PF00107.21 gi|84489056|ref|YP_447288.1| - 0.36 10.3 2.9 2.9 7.4 0.3 3.2 3 1 0 3 3 3 0 Zinc-binding dehydrogenase Sec61_beta PF03911.11 gi|84489057|ref|YP_447289.1| - 1.1e-14 53.9 0.0 1.2e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Sec61beta family ThiF PF00899.16 gi|84489058|ref|YP_447290.1| - 5.4e-39 133.1 0.6 7.9e-39 132.5 0.4 1.3 1 0 0 1 1 1 1 ThiF family MoeZ_MoeB PF05237.8 gi|84489058|ref|YP_447290.1| - 1.7e-06 27.5 0.0 4.5e-06 26.1 0.0 1.9 1 1 0 1 1 1 1 MoeZ/MoeB domain NAD_binding_7 PF13241.1 gi|84489058|ref|YP_447290.1| - 6.5e-06 26.3 0.1 2e-05 24.7 0.1 1.7 1 1 1 2 2 2 1 Putative NAD(P)-binding Saccharop_dh PF03435.13 gi|84489058|ref|YP_447290.1| - 5.7e-05 22.2 0.4 0.00011 21.2 0.3 1.5 1 1 0 1 1 1 1 Saccharopine dehydrogenase Shikimate_DH PF01488.15 gi|84489058|ref|YP_447290.1| - 5.7e-05 23.2 0.3 0.00015 21.8 0.2 1.8 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.13 gi|84489058|ref|YP_447290.1| - 0.013 15.5 0.5 0.038 13.9 0.0 2.0 2 0 0 2 2 2 0 TrkA-N domain 3HCDH_N PF02737.13 gi|84489058|ref|YP_447290.1| - 0.051 13.2 0.1 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|84489058|ref|YP_447290.1| - 0.09 12.3 0.3 0.23 11.0 0.1 1.7 1 1 1 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.11 gi|84489058|ref|YP_447290.1| - 0.094 12.1 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|84489058|ref|YP_447290.1| - 0.18 12.2 0.5 0.82 10.1 0.4 2.1 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF95 PF01944.12 gi|84489059|ref|YP_447291.1| - 2.6e-28 98.8 25.2 3.1e-28 98.5 17.5 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 FtsX PF02687.16 gi|84489059|ref|YP_447291.1| - 0.36 10.6 25.2 0.13 12.0 7.5 2.6 1 1 1 2 2 2 0 FtsX-like permease family DDE_Tnp_IS240 PF13610.1 gi|84489060|ref|YP_447292.1| - 0.0016 18.3 2.4 0.0016 18.3 1.7 2.7 2 1 1 3 3 3 1 DDE domain MULE PF10551.4 gi|84489060|ref|YP_447292.1| - 0.0018 18.4 0.1 0.0077 16.3 0.0 2.1 2 0 0 2 2 2 1 MULE transposase domain Zn-ribbon_8 PF09723.5 gi|84489060|ref|YP_447292.1| - 0.11 12.4 3.0 2.2 8.2 0.2 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zf-ISL3 PF14690.1 gi|84489060|ref|YP_447292.1| - 0.21 11.6 12.9 1.3 9.1 9.0 2.3 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|84489060|ref|YP_447292.1| - 0.59 9.9 8.7 1.5 8.6 6.0 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Mu-transpos_C PF09299.6 gi|84489060|ref|YP_447292.1| - 1.4 8.8 4.9 24 4.8 0.2 3.2 3 0 0 3 3 3 0 Mu transposase, C-terminal Thioredoxin_4 PF13462.1 gi|84489060|ref|YP_447292.1| - 2.1 8.3 8.7 0.18 11.7 0.5 2.9 2 1 1 3 3 3 0 Thioredoxin Gln-synt_C PF00120.19 gi|84489061|ref|YP_447293.1| - 6.1e-96 320.5 0.0 7.3e-96 320.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|84489061|ref|YP_447293.1| - 2.2e-25 88.0 0.0 4.2e-25 87.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain DUF128 PF01995.11 gi|84489062|ref|YP_447294.1| - 9.7e-155 512.3 11.9 2.3e-79 265.6 2.3 2.1 2 0 0 2 2 2 2 Domain of unknown function DUF128 HTH_12 PF08461.5 gi|84489062|ref|YP_447294.1| - 3.6e-25 87.4 2.3 7.6e-25 86.4 1.6 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Ribosomal_S19e PF01090.14 gi|84489062|ref|YP_447294.1| - 0.085 12.2 0.2 0.24 10.8 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein S19e Fer4_6 PF12837.2 gi|84489063|ref|YP_447295.1| - 9.5e-06 25.2 15.0 1.6e-05 24.5 1.9 3.3 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.22 gi|84489063|ref|YP_447295.1| - 1.1e-05 24.8 3.3 1.1e-05 24.8 2.3 3.1 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489063|ref|YP_447295.1| - 0.00017 21.3 20.4 0.006 16.3 1.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489063|ref|YP_447295.1| - 0.00039 20.7 9.3 0.0023 18.2 6.6 2.1 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489063|ref|YP_447295.1| - 0.0016 19.1 10.7 0.0077 16.9 2.2 2.5 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|84489063|ref|YP_447295.1| - 0.0018 18.5 10.2 0.0056 16.9 7.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489063|ref|YP_447295.1| - 0.025 14.4 11.4 0.063 13.1 7.9 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Barwin PF00967.12 gi|84489063|ref|YP_447295.1| - 0.026 14.2 1.2 0.03 13.9 0.9 1.3 1 1 0 1 1 1 0 Barwin family Fer4_8 PF13183.1 gi|84489063|ref|YP_447295.1| - 0.051 13.6 5.9 0.63 10.1 4.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489063|ref|YP_447295.1| - 0.079 13.5 17.0 0.19 12.3 3.5 3.6 3 2 0 3 3 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84489063|ref|YP_447295.1| - 0.085 13.2 12.1 0.23 11.9 2.0 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84489063|ref|YP_447295.1| - 0.26 11.6 8.3 0.22 11.9 1.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489063|ref|YP_447295.1| - 1.9 8.5 15.2 0.24 11.3 1.9 3.0 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|84489063|ref|YP_447295.1| - 2.3 8.8 10.2 0.64 10.6 0.7 2.6 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.22 gi|84489064|ref|YP_447296.1| - 2.9e-09 36.1 15.5 2.5e-08 33.1 1.2 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84489064|ref|YP_447296.1| - 1.2e-07 31.2 12.4 9.6e-05 22.0 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84489064|ref|YP_447296.1| - 5.4e-05 23.1 9.9 0.00032 20.6 6.8 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489064|ref|YP_447296.1| - 6.6e-05 23.2 13.2 0.0015 18.9 9.3 2.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489064|ref|YP_447296.1| - 0.00027 20.7 12.0 0.002 17.9 8.3 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489064|ref|YP_447296.1| - 0.00037 21.1 11.1 0.0014 19.3 1.4 2.4 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|84489064|ref|YP_447296.1| - 0.001 19.2 11.8 0.0068 16.6 8.2 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489064|ref|YP_447296.1| - 0.0012 18.6 3.2 0.0012 18.6 2.2 2.5 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489064|ref|YP_447296.1| - 0.0019 17.9 3.4 0.0019 17.9 2.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489064|ref|YP_447296.1| - 0.0028 18.1 18.1 0.02 15.3 3.9 3.3 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84489064|ref|YP_447296.1| - 0.0041 17.4 2.4 0.0041 17.4 1.7 2.2 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489064|ref|YP_447296.1| - 0.008 16.4 3.2 0.008 16.4 2.2 2.4 2 1 0 2 2 2 1 4Fe-4S binding domain Stig1 PF04885.8 gi|84489064|ref|YP_447296.1| - 0.023 14.8 8.1 0.024 14.8 5.6 1.1 1 0 0 1 1 1 0 Stigma-specific protein, Stig1 Fer4_11 PF13247.1 gi|84489064|ref|YP_447296.1| - 0.19 11.6 6.2 0.4 10.5 4.3 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489064|ref|YP_447296.1| - 0.62 10.6 13.9 1.1 9.9 2.2 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Hormone_4 PF00220.12 gi|84489064|ref|YP_447296.1| - 0.74 9.6 0.3 0.74 9.6 0.2 3.2 3 0 0 3 3 3 0 Neurohypophysial hormones, N-terminal Domain Fer4_18 PF13746.1 gi|84489064|ref|YP_447296.1| - 9.3 6.7 15.1 0.14 12.5 2.3 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain dUTPase_2 PF08761.6 gi|84489065|ref|YP_447297.1| - 0.44 10.6 3.1 0.54 10.3 2.1 1.3 1 1 0 1 1 1 0 dUTPase Cg6151-P PF10233.4 gi|84489066|ref|YP_447298.1| - 2.6 8.0 8.3 0.71 9.8 0.1 3.1 3 0 0 3 3 3 0 Uncharacterized conserved protein CG6151-P DUF1297 PF06973.7 gi|84489067|ref|YP_447299.1| - 4e-85 283.8 0.1 5.3e-85 283.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|84489067|ref|YP_447299.1| - 6.3e-54 181.0 0.0 1.3e-53 179.9 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|84489067|ref|YP_447299.1| - 1.2e-07 31.6 0.1 4.6e-06 26.4 0.0 2.2 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|84489067|ref|YP_447299.1| - 0.07 11.8 0.0 0.33 9.6 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon Fer4 PF00037.22 gi|84489068|ref|YP_447300.1| - 4e-13 48.3 15.4 1.6e-06 27.4 4.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84489068|ref|YP_447300.1| - 1.6e-11 44.3 21.3 4.2e-09 36.5 7.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489068|ref|YP_447300.1| - 4.5e-11 42.9 26.0 1.4e-08 34.9 9.4 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489068|ref|YP_447300.1| - 2.9e-10 39.5 16.0 1.1e-05 25.1 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489068|ref|YP_447300.1| - 5.3e-10 38.9 10.4 1.6e-05 24.5 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489068|ref|YP_447300.1| - 2.5e-09 36.4 16.2 1.3e-05 24.8 4.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489068|ref|YP_447300.1| - 2.5e-08 33.6 14.1 0.00032 20.5 3.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489068|ref|YP_447300.1| - 3.1e-08 33.5 9.6 8.4e-08 32.1 6.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489068|ref|YP_447300.1| - 1e-06 28.5 17.5 0.00013 22.0 1.4 2.4 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84489068|ref|YP_447300.1| - 1e-06 29.3 17.4 0.00064 20.4 2.6 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|84489068|ref|YP_447300.1| - 5e-06 26.8 10.8 0.0067 16.8 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489068|ref|YP_447300.1| - 1.4e-05 25.3 10.5 7.8e-05 22.9 7.3 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489068|ref|YP_447300.1| - 9e-05 22.7 22.6 0.00072 19.9 4.7 2.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84489068|ref|YP_447300.1| - 0.00011 22.4 9.4 0.0061 16.9 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|84489068|ref|YP_447300.1| - 0.0053 16.6 4.6 0.11 12.4 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain LIM PF00412.17 gi|84489068|ref|YP_447300.1| - 0.018 15.1 0.4 0.018 15.1 0.3 2.0 2 0 0 2 2 2 0 LIM domain Fer4_15 PF13459.1 gi|84489068|ref|YP_447300.1| - 0.023 15.2 14.3 1.3 9.6 9.9 2.4 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_20 PF14691.1 gi|84489068|ref|YP_447300.1| - 0.58 9.7 8.6 2.8 7.6 0.3 2.1 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Molydop_binding PF01568.16 gi|84489069|ref|YP_447301.1| - 1.3e-12 47.5 0.0 1.9e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.13 gi|84489069|ref|YP_447301.1| - 0.05 13.5 0.0 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Molybdopterin PF00384.17 gi|84489070|ref|YP_447302.1| - 3.1e-18 65.7 0.1 5.5e-13 48.4 0.0 2.2 2 1 0 2 2 2 2 Molybdopterin oxidoreductase RNA_pol_L_2 PF13656.1 gi|84489070|ref|YP_447302.1| - 0.095 12.1 0.0 5.7 6.4 0.0 2.9 2 0 0 2 2 2 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Amidohydro_3 PF07969.6 gi|84489071|ref|YP_447303.1| - 7.9e-55 186.7 0.0 9.1e-55 186.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|84489071|ref|YP_447303.1| - 1.8e-10 40.4 0.2 9.2e-10 38.1 0.0 2.3 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|84489071|ref|YP_447303.1| - 0.0001 22.4 0.1 0.088 12.8 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|84489071|ref|YP_447303.1| - 0.00011 22.0 0.1 0.32 10.5 0.0 2.8 3 0 0 3 3 3 2 Amidohydrolase family GXGXG PF01493.14 gi|84489072|ref|YP_447304.1| - 1.6e-32 112.1 24.2 3.7e-30 104.4 11.2 1.6 1 1 1 2 2 2 2 GXGXG motif DUF3938 PF13074.1 gi|84489072|ref|YP_447304.1| - 0.15 11.9 1.3 4.5 7.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) DUF2097 PF09870.4 gi|84489073|ref|YP_447305.1| - 1.2e-29 102.1 6.2 1.4e-29 102.0 4.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2097) SIS PF01380.17 gi|84489074|ref|YP_447306.1| - 4e-19 68.5 0.2 6.7e-19 67.7 0.1 1.5 1 1 0 1 1 1 1 SIS domain SIS_2 PF13580.1 gi|84489074|ref|YP_447306.1| - 1.7e-11 43.9 3.2 1.2e-05 25.0 0.5 2.3 1 1 1 2 2 2 2 SIS domain DUF531 PF04407.7 gi|84489074|ref|YP_447306.1| - 0.019 14.8 0.2 0.04 13.8 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF531) HTH_1 PF00126.22 gi|84489075|ref|YP_447307.1| - 4.4e-07 29.5 0.0 7.4e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_psq PF05225.11 gi|84489075|ref|YP_447307.1| - 0.0035 16.8 0.2 0.013 15.0 0.1 1.9 2 0 0 2 2 2 1 helix-turn-helix, Psq domain HTH_30 PF13556.1 gi|84489075|ref|YP_447307.1| - 0.0076 15.8 1.1 0.03 13.9 0.1 2.3 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain NUMOD1 PF07453.8 gi|84489075|ref|YP_447307.1| - 0.058 13.2 0.2 0.35 10.7 0.1 2.5 2 0 0 2 2 2 0 NUMOD1 domain HTH_24 PF13412.1 gi|84489075|ref|YP_447307.1| - 0.1 12.0 0.1 0.29 10.5 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Methyltransf_31 PF13847.1 gi|84489075|ref|YP_447307.1| - 0.28 10.7 2.4 0.5 9.9 0.3 2.5 1 1 1 2 2 2 0 Methyltransferase domain tRNA-synt_1f PF01921.13 gi|84489076|ref|YP_447308.1| - 4.4e-133 443.4 0.4 4.4e-133 443.4 0.3 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|84489076|ref|YP_447308.1| - 1.5e-05 23.8 0.0 0.00019 20.2 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) PrgH PF09480.5 gi|84489076|ref|YP_447308.1| - 0.019 13.8 0.7 0.029 13.2 0.5 1.2 1 0 0 1 1 1 0 Type III secretion system protein PrgH-EprH (PrgH) tRNA-synt_1e PF01406.14 gi|84489076|ref|YP_447308.1| - 0.05 12.7 0.0 0.48 9.4 0.0 2.5 3 0 0 3 3 3 0 tRNA synthetases class I (C) catalytic domain zf-UBR PF02207.15 gi|84489076|ref|YP_447308.1| - 0.054 13.2 0.5 0.1 12.3 0.4 1.3 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) TrkA_N PF02254.13 gi|84489077|ref|YP_447309.1| - 1.8e-28 98.8 5.4 1.8e-28 98.8 3.8 1.6 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.16 gi|84489077|ref|YP_447309.1| - 3.2e-08 33.0 0.3 1e-06 28.2 0.0 2.7 2 1 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|84489077|ref|YP_447309.1| - 1.6e-07 31.4 0.7 1.6e-07 31.4 0.5 1.9 2 1 1 3 3 2 1 Putative NAD(P)-binding Pyr_redox PF00070.22 gi|84489077|ref|YP_447309.1| - 5.4e-06 26.7 1.7 7.2e-06 26.3 0.3 2.0 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|84489077|ref|YP_447309.1| - 9.6e-06 24.8 0.1 1.2e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.12 gi|84489077|ref|YP_447309.1| - 1.3e-05 24.4 2.7 6.5e-05 22.1 1.4 2.3 2 2 0 2 2 2 1 Thi4 family DAO PF01266.19 gi|84489077|ref|YP_447309.1| - 1.3e-05 24.2 0.8 0.00016 20.6 0.2 2.1 1 1 1 2 2 2 1 FAD dependent oxidoreductase F420_oxidored PF03807.12 gi|84489077|ref|YP_447309.1| - 3e-05 24.3 2.4 0.0015 18.9 0.6 2.3 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|84489077|ref|YP_447309.1| - 4.5e-05 23.1 0.5 9.6e-05 22.1 0.2 1.6 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|84489077|ref|YP_447309.1| - 8.6e-05 22.6 1.5 0.00013 22.0 0.9 1.3 1 1 0 1 1 1 1 NADH(P)-binding AdoHcyase_NAD PF00670.16 gi|84489077|ref|YP_447309.1| - 0.00017 21.4 0.7 0.0003 20.6 0.5 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.15 gi|84489077|ref|YP_447309.1| - 0.0003 20.8 1.3 0.0006 19.9 0.7 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Pyr_redox_3 PF13738.1 gi|84489077|ref|YP_447309.1| - 0.00079 19.5 0.2 0.0026 17.8 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|84489077|ref|YP_447309.1| - 0.0014 18.5 0.0 0.0037 17.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|84489077|ref|YP_447309.1| - 0.0016 18.3 0.4 0.0036 17.1 0.2 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.18 gi|84489077|ref|YP_447309.1| - 0.0023 17.6 0.6 0.0047 16.6 0.4 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.16 gi|84489077|ref|YP_447309.1| - 0.004 16.9 1.0 0.0076 16.0 0.7 1.9 1 1 0 1 1 1 1 ThiF family Lycopene_cycl PF05834.7 gi|84489077|ref|YP_447309.1| - 0.0042 16.0 0.2 0.01 14.7 0.1 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein NAD_binding_2 PF03446.10 gi|84489077|ref|YP_447309.1| - 0.0043 16.9 0.4 0.014 15.2 0.3 1.9 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase adh_short PF00106.20 gi|84489077|ref|YP_447309.1| - 0.0058 16.5 0.9 0.0072 16.2 0.6 1.4 1 1 0 1 1 1 1 short chain dehydrogenase Semialdhyde_dh PF01118.19 gi|84489077|ref|YP_447309.1| - 0.006 16.8 0.2 0.01 16.0 0.1 1.6 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_9 PF13454.1 gi|84489077|ref|YP_447309.1| - 0.0061 16.3 1.5 0.031 14.0 0.3 2.0 1 1 1 2 2 2 1 FAD-NAD(P)-binding Rossmann-like PF10727.4 gi|84489077|ref|YP_447309.1| - 0.0063 16.2 0.5 0.012 15.3 0.3 1.5 1 1 0 1 1 1 1 Rossmann-like domain XdhC_C PF13478.1 gi|84489077|ref|YP_447309.1| - 0.0075 16.5 0.2 0.011 16.0 0.1 1.4 1 0 0 1 1 1 1 XdhC Rossmann domain Glyco_transf_4 PF13439.1 gi|84489077|ref|YP_447309.1| - 0.0084 15.8 0.0 0.11 12.1 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 RrnaAD PF00398.15 gi|84489077|ref|YP_447309.1| - 0.0095 14.9 0.1 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DFP PF04127.10 gi|84489077|ref|YP_447309.1| - 0.0098 15.5 0.2 0.019 14.5 0.2 1.4 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein HMGL-like PF00682.14 gi|84489077|ref|YP_447309.1| - 0.01 15.4 0.2 0.014 15.0 0.2 1.1 1 0 0 1 1 1 0 HMGL-like ApbA PF02558.11 gi|84489077|ref|YP_447309.1| - 0.013 14.9 0.5 0.026 13.9 0.3 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.9 gi|84489077|ref|YP_447309.1| - 0.013 14.8 0.5 0.043 13.1 0.1 2.0 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HI0933_like PF03486.9 gi|84489077|ref|YP_447309.1| - 0.013 13.9 0.1 0.026 13.0 0.0 1.5 2 0 0 2 2 2 0 HI0933-like protein FAD_binding_2 PF00890.19 gi|84489077|ref|YP_447309.1| - 0.024 13.4 0.1 0.036 12.9 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain NmrA PF05368.8 gi|84489077|ref|YP_447309.1| - 0.025 13.8 1.0 0.039 13.2 0.7 1.3 1 0 0 1 1 1 0 NmrA-like family KR PF08659.5 gi|84489077|ref|YP_447309.1| - 0.039 13.6 0.5 0.061 12.9 0.3 1.3 1 1 0 1 1 1 0 KR domain UDPG_MGDP_dh_C PF03720.10 gi|84489077|ref|YP_447309.1| - 0.048 13.8 0.3 0.1 12.7 0.2 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 3Beta_HSD PF01073.14 gi|84489077|ref|YP_447309.1| - 0.08 11.6 1.0 0.12 11.0 0.7 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family IlvN PF07991.7 gi|84489077|ref|YP_447309.1| - 0.1 11.9 0.2 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Saccharop_dh PF03435.13 gi|84489077|ref|YP_447309.1| - 0.19 10.6 1.1 0.27 10.1 0.7 1.3 1 1 0 1 1 1 0 Saccharopine dehydrogenase Trp_halogenase PF04820.9 gi|84489077|ref|YP_447309.1| - 0.47 9.0 1.7 6.1 5.3 0.2 2.2 1 1 1 2 2 2 0 Tryptophan halogenase ThiC PF01964.13 gi|84489078|ref|YP_447310.1| - 4e-186 618.6 2.4 4.5e-186 618.4 1.7 1.0 1 0 0 1 1 1 1 ThiC family PfkB PF00294.19 gi|84489079|ref|YP_447311.1| - 8.8e-59 199.0 0.0 1e-58 198.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase YbjQ_1 PF01906.12 gi|84489080|ref|YP_447312.1| - 1.6e-08 34.9 0.0 4.9e-08 33.3 0.0 1.8 1 1 0 1 1 1 1 Putative heavy-metal-binding EcsB PF05975.7 gi|84489080|ref|YP_447312.1| - 1.1 7.7 16.0 2 6.7 10.7 1.7 1 1 0 1 1 1 0 Bacterial ABC transporter protein EcsB Renin_r PF07850.9 gi|84489080|ref|YP_447312.1| - 9.3 6.6 9.7 1 9.7 2.0 2.4 2 0 0 2 2 2 0 Renin receptor-like protein NRDD PF13597.1 gi|84489081|ref|YP_447313.1| - 1.2e-147 492.3 0.3 2e-147 491.6 0.0 1.4 2 0 0 2 2 2 1 Anaerobic ribonucleoside-triphosphate reductase ATP-cone PF03477.11 gi|84489081|ref|YP_447313.1| - 1.2e-13 51.2 3.5 3.4e-06 27.3 0.1 3.4 3 0 0 3 3 3 2 ATP cone domain PolC_DP2 PF03833.8 gi|84489082|ref|YP_447314.1| - 0 1165.6 4.2 0 1163.8 2.9 1.7 1 1 0 1 1 1 1 DNA polymerase II large subunit DP2 Rifin_STEVOR PF02009.11 gi|84489083|ref|YP_447315.1| - 1.4e-05 24.8 1.0 1.9e-05 24.4 0.7 1.2 1 0 0 1 1 1 1 Rifin/stevor family DUF912 PF06024.7 gi|84489083|ref|YP_447315.1| - 0.0006 19.8 2.6 0.00075 19.5 1.8 1.2 1 0 0 1 1 1 1 Nucleopolyhedrovirus protein of unknown function (DUF912) ABC2_membrane_3 PF12698.2 gi|84489083|ref|YP_447315.1| - 0.00087 18.4 0.1 0.00087 18.4 0.1 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Endomucin PF07010.7 gi|84489083|ref|YP_447315.1| - 0.015 14.6 0.9 0.017 14.4 0.6 1.3 1 0 0 1 1 1 0 Endomucin TMEM154 PF15102.1 gi|84489083|ref|YP_447315.1| - 0.016 14.9 2.3 0.019 14.6 1.6 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF4448 PF14610.1 gi|84489083|ref|YP_447315.1| - 0.024 14.1 0.1 0.027 13.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) DUF3753 PF12575.3 gi|84489083|ref|YP_447315.1| - 0.031 14.0 5.6 0.031 14.0 3.9 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3753) DUF4238 PF14022.1 gi|84489083|ref|YP_447315.1| - 0.056 12.7 1.2 0.065 12.4 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) V-ATPase_C PF03223.10 gi|84489083|ref|YP_447315.1| - 0.07 12.0 1.8 0.079 11.8 1.3 1.1 1 0 0 1 1 1 0 V-ATPase subunit C Corona_3 PF04694.7 gi|84489083|ref|YP_447315.1| - 0.23 11.3 2.6 0.44 10.4 1.8 1.4 1 0 0 1 1 1 0 Coronavirus ORF3 protein EMP24_GP25L PF01105.19 gi|84489083|ref|YP_447315.1| - 0.67 9.6 5.1 21 4.7 3.5 2.1 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD RRN3 PF05327.6 gi|84489083|ref|YP_447315.1| - 0.73 7.8 5.2 0.82 7.7 3.6 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 MCP_N PF05581.7 gi|84489083|ref|YP_447315.1| - 0.76 9.9 5.1 1.2 9.3 3.4 1.4 1 1 0 1 1 1 0 Vibrio chemotaxis protein N terminus ODV-E18 PF10717.4 gi|84489083|ref|YP_447315.1| - 3.4 7.1 9.2 4.7 6.7 6.2 1.5 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 DUF3782 PF12644.2 gi|84489084|ref|YP_447316.1| - 0.088 12.6 0.1 1 9.1 0.0 2.7 2 2 0 2 2 2 0 Protein of unknown function (DUF3782) DUF2971 PF11185.3 gi|84489084|ref|YP_447316.1| - 3.9 8.2 23.6 0.3 11.8 7.5 3.9 2 2 0 2 2 2 0 Protein of unknown function (DUF2971) DNA_ligase_A_M PF01068.16 gi|84489085|ref|YP_447317.1| - 5e-53 179.4 2.0 8.5e-53 178.7 1.4 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|84489085|ref|YP_447317.1| - 2.7e-50 170.6 4.7 5.9e-48 163.0 1.6 2.7 2 1 1 3 3 3 2 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|84489085|ref|YP_447317.1| - 4.3e-16 59.1 0.0 9.1e-16 58.0 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region tRNA_anti-codon PF01336.20 gi|84489086|ref|YP_447318.1| - 1.9e-07 30.8 0.3 3.4e-07 30.0 0.2 1.5 1 1 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.1 gi|84489086|ref|YP_447318.1| - 2.4e-06 27.3 0.0 3e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Ribosomal_S4e PF00900.15 gi|84489086|ref|YP_447318.1| - 0.0053 16.3 1.1 0.0086 15.7 0.8 1.6 1 1 0 1 1 1 1 Ribosomal family S4e DUF2393 PF09624.5 gi|84489086|ref|YP_447318.1| - 0.063 12.8 4.8 0.059 12.9 2.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2393) DUF996 PF06195.8 gi|84489086|ref|YP_447318.1| - 0.073 13.0 0.3 0.094 12.7 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF996) FlgH PF02107.11 gi|84489086|ref|YP_447318.1| - 0.38 10.2 6.8 4.8 6.7 0.3 3.0 2 1 2 4 4 4 0 Flagellar L-ring protein EzrA PF06160.7 gi|84489087|ref|YP_447319.1| - 0.00026 19.3 33.8 0.00073 17.8 23.5 1.8 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA IncA PF04156.9 gi|84489087|ref|YP_447319.1| - 0.00036 20.1 52.5 0.0021 17.7 16.7 2.2 1 1 1 2 2 2 2 IncA protein TMPIT PF07851.8 gi|84489087|ref|YP_447319.1| - 0.0026 16.8 9.3 0.0026 16.8 6.4 2.4 2 0 0 2 2 2 1 TMPIT-like protein Fez1 PF06818.10 gi|84489087|ref|YP_447319.1| - 0.0046 16.9 21.4 0.0059 16.6 14.6 1.3 1 1 0 1 1 1 1 Fez1 DUF2968 PF11180.3 gi|84489087|ref|YP_447319.1| - 0.005 16.2 18.3 0.2 11.0 4.3 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2968) MCPsignal PF00015.16 gi|84489087|ref|YP_447319.1| - 0.01 15.3 10.6 0.19 11.2 0.7 2.6 2 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF869 PF05911.6 gi|84489087|ref|YP_447319.1| - 0.011 14.0 27.2 0.013 13.8 18.8 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF869) DUF2937 PF11157.3 gi|84489087|ref|YP_447319.1| - 0.018 14.4 4.5 2.8 7.2 0.0 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF2937) DUF972 PF06156.8 gi|84489087|ref|YP_447319.1| - 0.02 15.2 15.1 0.02 15.2 10.4 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF972) DUF3584 PF12128.3 gi|84489087|ref|YP_447319.1| - 0.023 12.0 25.1 0.035 11.4 17.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF2353 PF09789.4 gi|84489087|ref|YP_447319.1| - 0.024 13.9 32.8 0.063 12.5 15.3 2.2 1 1 1 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) RNA_bind_2 PF10133.4 gi|84489087|ref|YP_447319.1| - 0.027 14.4 2.3 0.6 10.1 0.2 2.8 2 0 0 2 2 2 0 Predicted RNA-binding protein CENP-F_leu_zip PF10473.4 gi|84489087|ref|YP_447319.1| - 0.027 14.3 36.5 0.2 11.4 11.6 2.3 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Reo_sigmaC PF04582.7 gi|84489087|ref|YP_447319.1| - 0.045 12.9 7.9 0.21 10.7 1.7 2.2 1 1 1 2 2 2 0 Reovirus sigma C capsid protein Myosin_tail_1 PF01576.14 gi|84489087|ref|YP_447319.1| - 0.048 11.3 35.5 0.15 9.7 24.6 1.7 1 1 0 1 1 1 0 Myosin tail DUF948 PF06103.6 gi|84489087|ref|YP_447319.1| - 0.089 12.6 18.4 0.07 12.9 4.6 3.0 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF342 PF03961.8 gi|84489087|ref|YP_447319.1| - 0.11 10.9 35.4 0.051 12.0 10.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF342) DUF4201 PF13870.1 gi|84489087|ref|YP_447319.1| - 0.17 11.2 37.3 0.45 9.9 8.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) DUF1664 PF07889.7 gi|84489087|ref|YP_447319.1| - 0.19 11.5 22.2 0.33 10.7 3.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.7 gi|84489087|ref|YP_447319.1| - 0.2 11.4 27.2 0.15 11.8 4.0 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF745 PF05335.8 gi|84489087|ref|YP_447319.1| - 0.25 10.8 18.3 0.051 13.1 5.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CCDC155 PF14662.1 gi|84489087|ref|YP_447319.1| - 0.26 10.8 37.0 1.5 8.4 13.4 2.4 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 LPP PF04728.8 gi|84489087|ref|YP_447319.1| - 0.29 10.9 5.5 3.4 7.5 0.2 3.3 3 0 0 3 3 3 0 Lipoprotein leucine-zipper TMCO5 PF14992.1 gi|84489087|ref|YP_447319.1| - 0.31 10.1 32.4 0.44 9.6 22.4 1.2 1 0 0 1 1 1 0 TMCO5 family AAA_13 PF13166.1 gi|84489087|ref|YP_447319.1| - 0.47 8.8 37.0 0.76 8.1 25.6 1.3 1 0 0 1 1 1 0 AAA domain Occludin_ELL PF07303.8 gi|84489087|ref|YP_447319.1| - 0.56 10.9 25.4 0.43 11.3 9.4 3.0 1 1 2 3 3 3 0 Occludin homology domain DUF904 PF06005.7 gi|84489087|ref|YP_447319.1| - 0.57 10.5 52.2 0.15 12.3 7.4 4.4 1 1 2 3 3 2 0 Protein of unknown function (DUF904) APG17 PF04108.7 gi|84489087|ref|YP_447319.1| - 0.75 8.5 30.2 1.1 8.0 5.8 2.1 1 1 1 2 2 2 0 Autophagy protein Apg17 Nup54 PF13874.1 gi|84489087|ref|YP_447319.1| - 0.75 9.4 26.9 0.065 12.9 10.3 3.0 1 1 2 3 3 3 0 Nucleoporin complex subunit 54 Laminin_II PF06009.7 gi|84489087|ref|YP_447319.1| - 0.79 9.4 29.2 0.35 10.6 5.5 2.2 1 1 1 2 2 2 0 Laminin Domain II DUF1409 PF07197.7 gi|84489087|ref|YP_447319.1| - 1 9.5 13.9 2.6 8.1 0.4 4.2 3 1 1 4 4 4 0 Protein of unknown function (DUF1409) DUF3450 PF11932.3 gi|84489087|ref|YP_447319.1| - 1.1 8.4 27.5 0.062 12.5 4.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF1129 PF06570.6 gi|84489087|ref|YP_447319.1| - 1.3 8.2 8.6 3.2 6.9 6.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) COG6 PF06419.6 gi|84489087|ref|YP_447319.1| - 1.4 6.9 29.7 1.8 6.5 8.3 2.2 1 1 1 2 2 2 0 Conserved oligomeric complex COG6 Fmp27_WPPW PF10359.4 gi|84489087|ref|YP_447319.1| - 1.6 7.1 31.1 3.3 6.0 10.7 2.2 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain APG6 PF04111.7 gi|84489087|ref|YP_447319.1| - 1.9 7.4 39.5 0.27 10.2 18.1 2.4 1 1 1 2 2 2 0 Autophagy protein Apg6 DUF4200 PF13863.1 gi|84489087|ref|YP_447319.1| - 2.1 8.3 40.7 0.49 10.3 15.3 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) Spc7 PF08317.6 gi|84489087|ref|YP_447319.1| - 2.4 6.7 38.3 4.9 5.7 12.1 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein GAS PF13851.1 gi|84489087|ref|YP_447319.1| - 2.5 7.2 47.8 1.8 7.6 21.5 2.9 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding BLOC1_2 PF10046.4 gi|84489087|ref|YP_447319.1| - 6.2 7.0 41.2 5.1 7.3 5.1 3.5 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ADIP PF11559.3 gi|84489087|ref|YP_447319.1| - 7.1 6.5 41.1 3 7.7 10.9 3.0 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding CALCOCO1 PF07888.6 gi|84489087|ref|YP_447319.1| - 7.5 4.7 30.2 19 3.4 20.2 1.7 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like ATG16 PF08614.6 gi|84489087|ref|YP_447319.1| - 7.9 6.2 45.3 1.8 8.3 12.6 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) IFT57 PF10498.4 gi|84489087|ref|YP_447319.1| - 9.4 4.8 38.5 8.3 5.0 10.8 2.8 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 NPV_P10 PF05531.7 gi|84489087|ref|YP_447319.1| - 9.5 6.5 21.4 0.15 12.3 2.2 4.0 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.16 gi|84489087|ref|YP_447319.1| - 9.5 6.5 27.2 9.3 6.5 8.6 3.3 1 1 3 4 4 4 0 Spectrin repeat Fib_alpha PF08702.5 gi|84489087|ref|YP_447319.1| - 9.6 6.3 34.9 0.043 13.9 5.5 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family PMT_2 PF13231.1 gi|84489088|ref|YP_447320.1| - 8.2e-10 38.7 20.5 8.2e-10 38.7 14.2 3.6 4 0 0 4 4 4 2 Dolichyl-phosphate-mannose-protein mannosyltransferase STT3 PF02516.9 gi|84489088|ref|YP_447320.1| - 3.9e-09 36.0 46.6 1.3e-06 27.6 18.3 2.1 1 1 1 2 2 2 2 Oligosaccharyl transferase STT3 subunit Glucos_trans_II PF14264.1 gi|84489088|ref|YP_447320.1| - 5.8 5.8 51.1 0.26 10.2 19.2 3.3 1 1 2 3 3 3 0 Glucosyl transferase GtrII CW_binding_2 PF04122.7 gi|84489089|ref|YP_447321.1| - 1.8e-06 28.0 5.2 0.019 15.1 0.0 4.1 3 2 0 3 3 3 2 Putative cell wall binding repeat 2 FtsH_ext PF06480.10 gi|84489089|ref|YP_447321.1| - 0.0049 17.0 7.7 4.2 7.5 0.0 4.2 2 2 0 2 2 2 2 FtsH Extracellular PGM_PMM_I PF02878.11 gi|84489090|ref|YP_447322.1| - 8.5e-43 145.1 0.0 9e-42 141.8 0.0 2.5 3 0 0 3 3 3 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|84489090|ref|YP_447322.1| - 1.3e-28 99.3 0.1 3.1e-28 98.1 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|84489090|ref|YP_447322.1| - 1.3e-24 86.3 0.1 3.8e-24 84.8 0.0 1.8 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|84489090|ref|YP_447322.1| - 1.5e-12 47.2 0.3 7.8e-12 45.0 0.0 2.3 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Fer4_7 PF12838.2 gi|84489091|ref|YP_447323.1| - 1.2e-08 35.2 6.2 2.2e-08 34.3 4.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489091|ref|YP_447323.1| - 6e-08 33.3 7.7 1.2e-07 32.3 5.3 1.5 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|84489091|ref|YP_447323.1| - 2.1e-06 27.0 7.5 0.008 15.7 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84489091|ref|YP_447323.1| - 6.4e-05 23.1 8.0 0.00024 21.2 5.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489091|ref|YP_447323.1| - 0.00022 20.9 8.9 0.11 12.3 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489091|ref|YP_447323.1| - 0.00029 20.5 9.4 0.0013 18.4 6.8 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489091|ref|YP_447323.1| - 0.00058 20.1 8.7 0.16 12.3 1.2 2.6 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489091|ref|YP_447323.1| - 0.0017 18.3 8.5 0.025 14.6 5.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489091|ref|YP_447323.1| - 0.0068 16.2 10.4 0.62 10.0 2.5 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain rRNA_proc-arch PF13234.1 gi|84489091|ref|YP_447323.1| - 0.0074 15.4 0.1 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 rRNA-processing arch domain Fer4_3 PF12798.2 gi|84489091|ref|YP_447323.1| - 0.0074 16.7 11.9 0.017 15.6 0.5 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489091|ref|YP_447323.1| - 0.015 15.1 10.9 0.3 10.9 7.5 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489091|ref|YP_447323.1| - 0.022 15.0 8.2 1 9.9 0.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Dehalogenase PF13486.1 gi|84489091|ref|YP_447323.1| - 0.089 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Reductive dehalogenase subunit Fer4_18 PF13746.1 gi|84489091|ref|YP_447323.1| - 2.4 8.6 10.6 39 4.7 1.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Cupin_2 PF07883.6 gi|84489092|ref|YP_447324.1| - 7.3e-15 54.2 0.0 1.3e-14 53.4 0.0 1.4 1 0 0 1 1 1 1 Cupin domain HTH_19 PF12844.2 gi|84489092|ref|YP_447324.1| - 1.1e-07 31.7 0.0 1.9e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.14 gi|84489092|ref|YP_447324.1| - 8.9e-07 28.6 0.0 1.2e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain HTH_3 PF01381.17 gi|84489092|ref|YP_447324.1| - 3.1e-06 26.9 0.0 5.8e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|84489092|ref|YP_447324.1| - 0.00048 20.2 0.0 0.0015 18.7 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.7 gi|84489092|ref|YP_447324.1| - 0.0027 17.0 0.0 0.0053 16.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.17 gi|84489092|ref|YP_447324.1| - 0.019 14.4 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 Cupin AMP-binding PF00501.23 gi|84489093|ref|YP_447325.1| - 9.4e-82 274.6 0.0 1.2e-81 274.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|84489093|ref|YP_447325.1| - 3.1e-17 63.2 0.1 6.8e-17 62.1 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Staygreen PF12638.2 gi|84489093|ref|YP_447325.1| - 0.097 12.2 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Staygreen protein PRA-PH PF01503.12 gi|84489094|ref|YP_447326.1| - 6.7e-14 51.9 0.2 1.1e-13 51.2 0.1 1.4 1 1 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase CBS PF00571.23 gi|84489095|ref|YP_447327.1| - 2.1e-30 104.1 5.5 1.1e-14 53.9 0.1 2.9 3 0 0 3 3 3 2 CBS domain ParBc PF02195.13 gi|84489095|ref|YP_447327.1| - 4.8e-14 52.2 0.3 3e-13 49.6 0.1 2.3 2 0 0 2 2 2 1 ParB-like nuclease domain ParBc_2 PF08857.6 gi|84489095|ref|YP_447327.1| - 0.0011 18.8 1.0 0.0049 16.7 0.2 2.2 2 1 0 2 2 2 1 Putative ParB-like nuclease DUF262 PF03235.9 gi|84489095|ref|YP_447327.1| - 0.061 13.2 0.1 0.23 11.3 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF262 GatB_N PF02934.10 gi|84489096|ref|YP_447328.1| - 4.2e-93 311.3 0.0 6.6e-93 310.7 0.0 1.3 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|84489096|ref|YP_447328.1| - 1.3e-39 135.3 3.8 2.5e-39 134.3 2.7 1.5 1 0 0 1 1 1 1 GatB domain FXa_inhibition PF14670.1 gi|84489096|ref|YP_447328.1| - 0.05 13.7 1.6 0.053 13.6 0.3 1.6 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site Radical_SAM PF04055.16 gi|84489097|ref|YP_447329.1| - 9.8e-06 25.8 0.1 2.5e-05 24.5 0.1 1.7 1 0 0 1 1 1 1 Radical SAM superfamily PRK PF00485.13 gi|84489097|ref|YP_447329.1| - 0.054 13.0 0.0 0.083 12.4 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family TPP_enzyme_C PF02775.16 gi|84489098|ref|YP_447330.1| - 1.3e-20 73.5 0.0 2.7e-20 72.5 0.0 1.5 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|84489098|ref|YP_447330.1| - 0.00018 20.5 0.7 0.0022 16.9 0.1 1.9 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.15 gi|84489098|ref|YP_447330.1| - 0.007 15.1 0.0 0.0083 14.8 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_N PF02776.13 gi|84489099|ref|YP_447331.1| - 3.9e-08 32.9 0.0 4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ldh_2 PF02615.9 gi|84489100|ref|YP_447332.1| - 1.7e-112 375.4 1.0 1.9e-112 375.3 0.7 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase AIRS_C PF02769.17 gi|84489101|ref|YP_447333.1| - 2.9e-18 66.3 0.0 5.7e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|84489101|ref|YP_447333.1| - 4.8e-17 61.9 1.2 8.2e-17 61.2 0.8 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Beta-Casp PF10996.3 gi|84489102|ref|YP_447334.1| - 4.3e-35 120.4 0.0 1.2e-34 118.9 0.0 1.9 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|84489102|ref|YP_447334.1| - 2.3e-21 76.3 0.7 4.7e-21 75.3 0.5 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|84489102|ref|YP_447334.1| - 1.2e-09 37.7 0.0 4e-09 36.1 0.0 1.9 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|84489102|ref|YP_447334.1| - 6.5e-09 35.6 0.5 1.7e-08 34.2 0.4 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|84489102|ref|YP_447334.1| - 0.0022 17.7 0.1 0.014 15.1 0.0 2.3 2 1 0 2 2 2 1 Beta-lactamase superfamily domain KH_2 PF07650.12 gi|84489102|ref|YP_447334.1| - 0.0056 16.1 0.1 0.0056 16.1 0.1 3.7 5 0 0 5 5 5 1 KH domain KH_1 PF00013.24 gi|84489102|ref|YP_447334.1| - 0.013 15.0 0.2 0.013 15.0 0.2 2.1 2 0 0 2 2 2 0 KH domain KH_4 PF13083.1 gi|84489102|ref|YP_447334.1| - 0.034 13.7 0.1 0.096 12.3 0.1 1.8 1 0 0 1 1 1 0 KH domain Proteasome PF00227.21 gi|84489103|ref|YP_447335.1| - 8.8e-57 191.4 0.8 1.1e-56 191.1 0.6 1.0 1 0 0 1 1 1 1 Proteasome subunit ParA PF10609.4 gi|84489104|ref|YP_447336.1| - 4.6e-29 100.1 0.6 1e-28 98.9 0.4 1.6 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|84489104|ref|YP_447336.1| - 3e-21 75.7 0.1 4.8e-21 75.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|84489104|ref|YP_447336.1| - 6.1e-07 29.5 0.0 3.2e-05 23.9 0.0 2.5 3 0 0 3 3 3 1 AAA domain Fer4_NifH PF00142.13 gi|84489104|ref|YP_447336.1| - 6e-06 25.6 0.3 0.0073 15.5 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|84489104|ref|YP_447336.1| - 2.3e-05 23.5 0.3 0.0015 17.6 0.1 2.3 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.6 gi|84489104|ref|YP_447336.1| - 3.1e-05 23.1 0.0 5.3e-05 22.4 0.0 1.4 1 1 0 1 1 1 1 ATPase MipZ DUF258 PF03193.11 gi|84489104|ref|YP_447336.1| - 0.0052 15.9 0.0 0.0087 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 SRP54 PF00448.17 gi|84489104|ref|YP_447336.1| - 0.024 14.0 0.0 0.066 12.6 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain APS_kinase PF01583.15 gi|84489104|ref|YP_447336.1| - 0.025 14.2 0.0 0.043 13.4 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_17 PF13207.1 gi|84489104|ref|YP_447336.1| - 0.038 14.7 0.0 0.066 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain PRK PF00485.13 gi|84489104|ref|YP_447336.1| - 0.075 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.1 gi|84489104|ref|YP_447336.1| - 0.079 12.3 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain MCR_C PF04609.7 gi|84489105|ref|YP_447337.1| - 1.1e-112 375.1 0.8 1.3e-112 374.9 0.5 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C 2-ph_phosp PF04029.9 gi|84489107|ref|YP_447339.1| - 6.8e-60 201.9 8.8 7.7e-60 201.7 6.1 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase TraB PF01963.12 gi|84489108|ref|YP_447340.1| - 8.9e-54 182.6 0.0 1.1e-53 182.3 0.0 1.1 1 0 0 1 1 1 1 TraB family DUF3541 PF12060.3 gi|84489108|ref|YP_447340.1| - 0.058 12.6 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3541) RseC_MucC PF04246.7 gi|84489108|ref|YP_447340.1| - 4.1 6.9 6.2 19 4.8 4.3 2.0 1 1 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1922 PF09082.5 gi|84489109|ref|YP_447341.1| - 2.2e-41 139.7 4.9 2.4e-41 139.6 3.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) DUF1390 PF07150.6 gi|84489109|ref|YP_447341.1| - 0.029 13.7 2.9 0.03 13.6 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) V-SNARE PF05008.10 gi|84489109|ref|YP_447341.1| - 0.087 12.9 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus ATP_bind_3 PF01171.15 gi|84489110|ref|YP_447342.1| - 1.5e-14 53.8 0.0 2.3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|84489110|ref|YP_447342.1| - 9.8e-08 30.9 0.0 1.4e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.14 gi|84489110|ref|YP_447342.1| - 0.0011 18.7 0.0 0.0035 17.2 0.0 1.8 2 1 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family RecR PF02132.10 gi|84489110|ref|YP_447342.1| - 0.034 13.5 1.7 0.083 12.3 1.2 1.7 1 0 0 1 1 1 0 RecR protein PRKCSH_1 PF13015.1 gi|84489110|ref|YP_447342.1| - 0.041 13.3 0.1 1.1 8.6 0.0 2.5 2 1 0 2 2 2 0 Glucosidase II beta subunit-like protein ATP_bind_4 PF01902.12 gi|84489110|ref|YP_447342.1| - 0.048 13.0 0.0 0.089 12.1 0.0 1.4 1 0 0 1 1 1 0 ATP-binding region DegT_DnrJ_EryC1 PF01041.12 gi|84489111|ref|YP_447343.1| - 4.2e-136 453.7 0.3 4.7e-136 453.5 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 gi|84489111|ref|YP_447343.1| - 4.5e-11 42.3 0.3 1.8e-10 40.3 0.2 1.9 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|84489111|ref|YP_447343.1| - 2.8e-10 39.8 0.3 4.3e-10 39.2 0.2 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|84489111|ref|YP_447343.1| - 1.4e-09 36.7 0.1 2.2e-09 36.1 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|84489111|ref|YP_447343.1| - 5.4e-08 31.9 0.2 6.5e-07 28.4 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-V DUF1967 PF09269.6 gi|84489111|ref|YP_447343.1| - 0.029 14.0 0.0 0.46 10.1 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1967) DUF2624 PF11116.3 gi|84489111|ref|YP_447343.1| - 0.041 14.4 0.0 5.2 7.6 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2624) TRM PF02005.11 gi|84489112|ref|YP_447344.1| - 6.5e-120 400.5 0.0 7.5e-120 400.2 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.1 gi|84489112|ref|YP_447344.1| - 2.7e-06 27.0 0.6 4.6e-06 26.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|84489112|ref|YP_447344.1| - 9.9e-05 21.7 0.1 0.00019 20.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|84489112|ref|YP_447344.1| - 0.0004 19.6 0.3 0.00057 19.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.13 gi|84489112|ref|YP_447344.1| - 0.0012 17.9 0.0 0.0022 17.1 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Met_10 PF02475.11 gi|84489112|ref|YP_447344.1| - 0.0037 16.8 0.1 0.0066 16.0 0.1 1.5 1 0 0 1 1 1 1 Met-10+ like-protein TF_Zn_Ribbon PF08271.7 gi|84489112|ref|YP_447344.1| - 0.0064 15.7 0.5 2 7.8 0.0 2.5 2 0 0 2 2 2 2 TFIIB zinc-binding Cons_hypoth95 PF03602.10 gi|84489112|ref|YP_447344.1| - 0.0068 15.8 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_26 PF13659.1 gi|84489112|ref|YP_447344.1| - 0.0076 16.2 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|84489112|ref|YP_447344.1| - 0.022 14.3 0.1 0.12 11.9 0.1 1.9 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-ribbon_3 PF13248.1 gi|84489112|ref|YP_447344.1| - 0.48 9.7 2.9 5.2 6.4 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DUF2188 PF09954.4 gi|84489113|ref|YP_447345.1| - 0.054 13.4 0.1 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) HTH_24 PF13412.1 gi|84489114|ref|YP_447346.1| - 8.9e-16 57.0 0.1 1.8e-15 56.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|84489114|ref|YP_447346.1| - 1.5e-14 53.2 0.1 2.1e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|84489114|ref|YP_447346.1| - 9.2e-07 28.4 0.4 2.6e-06 26.9 0.0 1.9 2 0 0 2 2 2 1 HTH domain HTH_23 PF13384.1 gi|84489114|ref|YP_447346.1| - 4.1e-06 26.2 0.0 8.4e-06 25.2 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain AsnC_trans_reg PF01037.16 gi|84489114|ref|YP_447346.1| - 1.5e-05 24.6 0.2 4.8e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 AsnC family Sigma70_r4_2 PF08281.7 gi|84489114|ref|YP_447346.1| - 0.00017 21.0 0.0 0.00027 20.3 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.1 gi|84489114|ref|YP_447346.1| - 0.00024 20.2 0.0 0.00035 19.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.1 gi|84489114|ref|YP_447346.1| - 0.0003 20.7 0.0 0.00056 19.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|84489114|ref|YP_447346.1| - 0.00063 19.3 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|84489114|ref|YP_447346.1| - 0.00095 18.7 0.0 0.0017 17.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|84489114|ref|YP_447346.1| - 0.0011 18.7 0.0 0.0017 18.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|84489114|ref|YP_447346.1| - 0.0012 18.3 0.0 0.0026 17.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|84489114|ref|YP_447346.1| - 0.004 17.4 0.0 0.0067 16.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|84489114|ref|YP_447346.1| - 0.0049 16.5 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.7 gi|84489114|ref|YP_447346.1| - 0.0054 16.2 0.0 0.01 15.3 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain RPA_C PF08784.6 gi|84489114|ref|YP_447346.1| - 0.0056 17.0 0.1 0.054 13.9 0.0 2.1 2 0 0 2 2 2 1 Replication protein A C terminal Fe_dep_repress PF01325.14 gi|84489114|ref|YP_447346.1| - 0.0091 15.9 0.0 0.022 14.7 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.5 gi|84489114|ref|YP_447346.1| - 0.015 14.8 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF2089 PF09862.4 gi|84489114|ref|YP_447346.1| - 0.016 14.9 0.5 1 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2089) Trp_repressor PF01371.14 gi|84489114|ref|YP_447346.1| - 0.017 15.0 0.2 0.12 12.3 0.0 2.1 2 0 0 2 2 2 0 Trp repressor protein TrmB PF01978.14 gi|84489114|ref|YP_447346.1| - 0.019 14.6 0.0 0.04 13.6 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Sigma70_r4 PF04545.11 gi|84489114|ref|YP_447346.1| - 0.021 14.1 0.0 0.032 13.5 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_34 PF13601.1 gi|84489114|ref|YP_447346.1| - 0.035 14.1 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain SICA_C PF12879.2 gi|84489114|ref|YP_447346.1| - 0.1 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 SICA C-terminal inner membrane domain B-block_TFIIIC PF04182.7 gi|84489114|ref|YP_447346.1| - 0.11 12.3 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_29 PF13551.1 gi|84489114|ref|YP_447346.1| - 0.14 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix GCHY-1 PF02649.9 gi|84489115|ref|YP_447347.1| - 1e-85 287.3 2.4 1.1e-85 287.1 1.7 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 DUF2120 PF09893.4 gi|84489116|ref|YP_447348.1| - 6.9e-54 181.7 1.4 7.8e-54 181.5 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) Radical_SAM PF04055.16 gi|84489117|ref|YP_447349.1| - 2.1e-13 50.7 0.0 3.9e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Met_10 PF02475.11 gi|84489118|ref|YP_447350.1| - 2e-59 200.5 0.3 2.8e-59 200.0 0.2 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|84489118|ref|YP_447350.1| - 6.2e-09 36.4 0.0 1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84489118|ref|YP_447350.1| - 2.9e-07 30.0 0.0 9e-07 28.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain TRM PF02005.11 gi|84489118|ref|YP_447350.1| - 4.1e-07 29.2 0.0 5.1e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_31 PF13847.1 gi|84489118|ref|YP_447350.1| - 5.5e-07 29.2 0.0 7.9e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|84489118|ref|YP_447350.1| - 6e-07 29.1 0.0 8.5e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_26 PF13659.1 gi|84489118|ref|YP_447350.1| - 0.00011 22.1 0.0 0.0002 21.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|84489118|ref|YP_447350.1| - 0.00018 20.7 0.0 0.00026 20.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_21 PF05050.7 gi|84489118|ref|YP_447350.1| - 0.00059 19.8 0.0 0.0011 18.9 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase FkbM domain tRNA_U5-meth_tr PF05958.6 gi|84489118|ref|YP_447350.1| - 0.003 16.2 0.0 0.0045 15.7 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DNA_methylase PF00145.12 gi|84489118|ref|YP_447350.1| - 0.012 14.7 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Methyltransf_3 PF01596.12 gi|84489118|ref|YP_447350.1| - 0.021 13.8 0.0 0.098 11.6 0.0 2.1 1 1 0 1 1 1 0 O-methyltransferase Cons_hypoth95 PF03602.10 gi|84489118|ref|YP_447350.1| - 0.034 13.5 0.0 0.064 12.6 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 RrnaAD PF00398.15 gi|84489118|ref|YP_447350.1| - 0.043 12.8 0.0 0.055 12.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.7 gi|84489118|ref|YP_447350.1| - 0.051 14.0 0.0 0.087 13.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.12 gi|84489118|ref|YP_447350.1| - 0.051 12.6 0.0 0.18 10.8 0.0 1.8 2 0 0 2 2 2 0 Putative methyltransferase DUF512 PF04459.7 gi|84489119|ref|YP_447351.1| - 3.2e-27 94.9 0.0 4.3e-27 94.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF512) Radical_SAM PF04055.16 gi|84489119|ref|YP_447351.1| - 0.00017 21.7 9.0 0.0014 18.8 4.6 3.0 2 2 0 2 2 2 1 Radical SAM superfamily Tnp_zf-ribbon_2 PF13842.1 gi|84489119|ref|YP_447351.1| - 5.9 7.3 12.3 24 5.4 5.9 2.5 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon MCR_C PF04609.7 gi|84489120|ref|YP_447352.1| - 2.8e-35 121.4 5.3 1.2e-32 112.8 0.1 2.9 1 1 2 3 3 3 3 Methyl-coenzyme M reductase operon protein C MtrE PF04206.7 gi|84489121|ref|YP_447353.1| - 1.3e-93 312.9 18.7 1.5e-93 312.7 12.9 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E NADHdh_A3 PF14987.1 gi|84489121|ref|YP_447353.1| - 0.12 12.2 0.6 1.3 8.9 0.5 2.2 1 1 1 2 2 2 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 MtrD PF04207.7 gi|84489122|ref|YP_447354.1| - 1.9e-72 243.2 23.4 2.2e-72 243.0 16.2 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D DUF1628 PF07790.6 gi|84489122|ref|YP_447354.1| - 0.058 14.1 2.2 1.5 9.6 0.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1628) MtrC PF04211.8 gi|84489123|ref|YP_447355.1| - 7.2e-52 176.0 25.7 8.4e-52 175.7 17.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C DUF373 PF04123.8 gi|84489123|ref|YP_447355.1| - 0.22 10.4 26.7 0.034 13.1 10.4 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF373) DUF4051 PF13260.1 gi|84489123|ref|YP_447355.1| - 0.23 10.8 1.4 0.85 8.9 1.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) MtrB PF05440.7 gi|84489124|ref|YP_447356.1| - 9.6e-18 64.0 0.2 1.1e-17 63.8 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrA PF04208.9 gi|84489125|ref|YP_447357.1| - 1.6e-75 252.3 5.5 2.3e-75 251.8 3.8 1.2 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.5 gi|84489125|ref|YP_447357.1| - 0.0011 18.1 0.5 0.003 16.7 0.4 1.7 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrG PF04210.8 gi|84489125|ref|YP_447357.1| - 0.078 12.6 2.3 0.15 11.7 0.6 2.1 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G MtrF PF09472.5 gi|84489126|ref|YP_447358.1| - 3.6e-15 54.9 0.1 4e-15 54.7 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrG PF04210.8 gi|84489127|ref|YP_447359.1| - 6.8e-20 70.5 0.9 7.6e-20 70.3 0.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G Phasin PF05597.6 gi|84489127|ref|YP_447359.1| - 0.05 13.3 0.1 0.062 13.0 0.1 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF2453 PF10507.4 gi|84489127|ref|YP_447359.1| - 0.069 12.9 0.0 0.072 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2453) DUF2116 PF09889.4 gi|84489127|ref|YP_447359.1| - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) KxDL PF10241.4 gi|84489127|ref|YP_447359.1| - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein Fusion_gly PF00523.13 gi|84489127|ref|YP_447359.1| - 0.14 10.2 0.0 0.15 10.0 0.0 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 MtrF PF09472.5 gi|84489127|ref|YP_447359.1| - 0.16 11.2 3.1 0.17 11.1 1.0 1.7 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrH PF02007.13 gi|84489128|ref|YP_447360.1| - 3.3e-137 456.3 2.5 3.7e-137 456.2 1.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit DUF2114 PF09887.4 gi|84489129|ref|YP_447361.1| - 3.2e-184 612.4 4.9 3.7e-184 612.2 3.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) Meiotic_rec114 PF03525.9 gi|84489129|ref|YP_447361.1| - 0.0019 16.7 3.2 0.0033 15.9 2.2 1.3 1 0 0 1 1 1 1 Meiotic recombination protein rec114 DUF4546 PF15079.1 gi|84489129|ref|YP_447361.1| - 0.14 11.2 2.7 0.27 10.3 1.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4546) Peptidase_M48 PF01435.13 gi|84489130|ref|YP_447362.1| - 1.5e-40 139.1 0.3 2.1e-40 138.6 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|84489130|ref|YP_447362.1| - 0.00075 18.5 0.1 0.0012 17.8 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 ABC2_membrane_4 PF12730.2 gi|84489130|ref|YP_447362.1| - 0.0013 17.9 8.6 0.011 14.8 3.5 2.1 2 0 0 2 2 2 2 ABC-2 family transporter protein TM_helix PF05552.7 gi|84489130|ref|YP_447362.1| - 0.4 10.3 4.1 0.25 11.0 0.3 2.5 2 0 0 2 2 2 0 Conserved TM helix NTP_transf_3 PF12804.2 gi|84489131|ref|YP_447363.1| - 1.2e-14 54.6 0.0 1.4e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|84489131|ref|YP_447363.1| - 1.7e-07 31.0 0.2 2.4e-07 30.5 0.1 1.4 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 gi|84489131|ref|YP_447363.1| - 2.9e-07 30.2 0.0 5.8e-07 29.2 0.0 1.6 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|84489131|ref|YP_447363.1| - 2e-06 27.2 0.0 5.8e-06 25.7 0.0 1.7 1 1 0 1 1 1 1 Nucleotidyl transferase CofC PF01983.11 gi|84489131|ref|YP_447363.1| - 0.0084 15.0 0.2 0.014 14.3 0.2 1.3 1 0 0 1 1 1 1 Guanylyl transferase CofC like PRC PF05239.11 gi|84489132|ref|YP_447364.1| - 1.4e-08 34.4 0.8 2.2e-08 33.8 0.6 1.3 1 1 0 1 1 1 1 PRC-barrel domain TRAM PF01938.15 gi|84489132|ref|YP_447364.1| - 0.096 12.4 2.5 0.75 9.6 1.8 2.0 1 1 0 1 1 1 0 TRAM domain UPF0051 PF01458.12 gi|84489133|ref|YP_447365.1| - 3.8e-57 193.3 0.6 5.6e-57 192.8 0.4 1.3 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Glyco_hydro_98C PF08307.6 gi|84489133|ref|YP_447365.1| - 0.051 12.8 0.2 0.099 11.9 0.1 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 98 C-terminal domain UPF0181 PF03701.9 gi|84489133|ref|YP_447365.1| - 0.086 12.1 0.4 0.2 10.9 0.3 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) ABC_tran PF00005.22 gi|84489134|ref|YP_447366.1| - 5.5e-23 81.7 0.1 8.3e-23 81.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489134|ref|YP_447366.1| - 6.6e-09 36.1 7.2 4.9e-07 30.0 5.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|84489134|ref|YP_447366.1| - 0.00012 21.5 0.1 0.00022 20.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|84489134|ref|YP_447366.1| - 0.00021 20.5 1.9 0.003 16.8 1.3 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|84489134|ref|YP_447366.1| - 0.0026 16.9 0.0 0.0042 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|84489134|ref|YP_447366.1| - 0.0078 16.5 8.9 0.04 14.2 6.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|84489134|ref|YP_447366.1| - 0.015 14.6 0.1 0.037 13.4 0.0 1.8 2 1 0 2 2 2 0 AAA domain DUF150 PF02576.12 gi|84489134|ref|YP_447366.1| - 0.025 14.1 0.0 0.047 13.2 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised BCR, YhbC family COG0779 AAA_33 PF13671.1 gi|84489134|ref|YP_447366.1| - 0.048 13.5 0.0 0.072 12.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|84489134|ref|YP_447366.1| - 0.11 12.6 0.3 0.67 10.1 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|84489134|ref|YP_447366.1| - 0.21 10.5 8.9 0.032 13.3 1.6 2.0 1 1 1 2 2 2 0 AAA ATPase domain FlpD PF02662.11 gi|84489135|ref|YP_447367.1| - 4.3e-56 187.9 0.1 4.9e-56 187.7 0.0 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit Oxidored_q6 PF01058.17 gi|84489136|ref|YP_447368.1| - 2.8e-31 107.8 0.0 4.5e-31 107.1 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFeSe_Hases PF00374.14 gi|84489137|ref|YP_447369.1| - 7.1e-30 104.2 0.0 1.9e-15 56.6 0.0 3.0 1 1 1 3 3 3 3 Nickel-dependent hydrogenase BATS PF06968.8 gi|84489138|ref|YP_447370.1| - 0.0021 17.8 0.0 0.0045 16.7 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain MCR_beta PF02241.13 gi|84489139|ref|YP_447371.1| - 2.6e-140 465.9 5.3 3.5e-140 465.5 3.7 1.2 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|84489139|ref|YP_447371.1| - 5.6e-73 244.2 0.7 8.9e-73 243.6 0.5 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain MCR_D PF02505.9 gi|84489140|ref|YP_447372.1| - 3e-58 195.7 0.9 3.4e-58 195.5 0.6 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_gamma PF02240.11 gi|84489141|ref|YP_447373.1| - 1.5e-133 443.5 2.4 1.7e-133 443.3 1.7 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_alpha_N PF02745.10 gi|84489142|ref|YP_447374.1| - 2.9e-151 502.1 0.0 3.8e-151 501.7 0.0 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|84489142|ref|YP_447374.1| - 3.8e-63 211.1 4.1 1e-62 209.8 1.8 2.2 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_beta_N PF02783.10 gi|84489142|ref|YP_447374.1| - 0.031 13.7 0.0 0.058 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain zf-ribbon_3 PF13248.1 gi|84489143|ref|YP_447375.1| - 6.7e-05 21.9 3.8 0.00011 21.2 2.7 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489143|ref|YP_447375.1| - 0.00068 19.0 5.0 0.0017 17.7 3.5 1.7 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489143|ref|YP_447375.1| - 0.0017 18.1 1.3 0.0031 17.2 0.9 1.4 1 0 0 1 1 1 1 Double zinc ribbon TM2 PF05154.11 gi|84489143|ref|YP_447375.1| - 0.0032 17.6 12.4 0.0071 16.5 8.6 1.6 1 1 0 1 1 1 1 TM2 domain zf-RanBP PF00641.13 gi|84489143|ref|YP_447375.1| - 0.1 11.7 2.9 0.26 10.3 2.0 1.7 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others TF_Zn_Ribbon PF08271.7 gi|84489143|ref|YP_447375.1| - 0.13 11.5 5.0 0.25 10.6 3.5 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding Amidohydro_4 PF13147.1 gi|84489144|ref|YP_447376.1| - 1e-24 88.0 0.0 1.8e-24 87.2 0.0 1.4 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|84489144|ref|YP_447376.1| - 1.1e-22 81.1 1.7 2e-21 77.0 1.2 2.2 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|84489144|ref|YP_447376.1| - 2.2e-12 46.6 3.5 4.8e-12 45.5 2.4 1.6 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|84489144|ref|YP_447376.1| - 1.6e-09 37.4 0.2 1.1e-06 28.1 0.0 3.0 1 1 1 2 2 2 2 Amidohydrolase family TatD_DNase PF01026.16 gi|84489144|ref|YP_447376.1| - 0.00036 19.8 1.7 0.017 14.2 0.5 2.9 2 1 0 2 2 2 1 TatD related DNase DHOase PF12890.2 gi|84489144|ref|YP_447376.1| - 0.00054 19.6 0.1 0.0021 17.7 0.0 2.2 1 1 1 2 2 2 1 Dihydro-orotase-like Motile_Sperm PF00635.21 gi|84489144|ref|YP_447376.1| - 0.0043 16.6 0.7 0.11 12.1 0.2 2.7 2 0 0 2 2 2 1 MSP (Major sperm protein) domain HIGH_NTase1 PF05636.6 gi|84489145|ref|YP_447377.1| - 2.1e-21 76.4 1.5 4.2e-12 45.8 0.0 2.1 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase HHH_3 PF12836.2 gi|84489145|ref|YP_447377.1| - 0.0009 19.1 0.3 0.0022 17.9 0.2 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif CTP_transf_2 PF01467.21 gi|84489145|ref|YP_447377.1| - 0.034 14.1 0.0 0.27 11.2 0.0 2.3 2 0 0 2 2 2 0 Cytidylyltransferase Tnp_DNA_bind PF14706.1 gi|84489145|ref|YP_447377.1| - 0.041 13.5 0.0 0.086 12.5 0.0 1.5 1 0 0 1 1 1 0 Transposase DNA-binding PyrI PF01948.13 gi|84489145|ref|YP_447377.1| - 0.055 13.4 4.4 4.1 7.4 0.1 3.2 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, allosteric domain FKBP_C PF00254.23 gi|84489146|ref|YP_447378.1| - 1.1e-15 57.3 0.2 2.6e-15 56.2 0.1 1.6 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Pcc1 PF09341.5 gi|84489147|ref|YP_447379.1| - 0.0006 19.7 0.0 0.001 19.0 0.0 1.5 1 1 0 1 1 1 1 Transcription factor Pcc1 DUF187 PF02638.10 gi|84489147|ref|YP_447379.1| - 0.11 11.3 0.2 0.1 11.4 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase like GH101 Ribosomal_L16 PF00252.13 gi|84489148|ref|YP_447380.1| - 6.6e-28 97.1 0.3 7.4e-28 96.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ATP-synt_DE PF00401.15 gi|84489148|ref|YP_447380.1| - 0.16 11.9 0.2 0.16 11.9 0.2 1.7 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PPDK_N PF01326.14 gi|84489149|ref|YP_447381.1| - 1.7e-100 336.2 0.0 2.6e-100 335.6 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|84489149|ref|YP_447381.1| - 1.3e-87 293.3 0.1 2.3e-87 292.6 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|84489149|ref|YP_447381.1| - 1.9e-28 97.8 0.8 7.1e-28 95.9 0.6 2.1 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Pyridoxal_deC PF00282.14 gi|84489150|ref|YP_447382.1| - 7.2e-33 113.5 0.0 9.9e-33 113.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|84489150|ref|YP_447382.1| - 3.1e-15 55.8 0.2 4.6e-14 51.9 0.2 2.0 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|84489150|ref|YP_447382.1| - 8.9e-08 31.5 0.0 1.5e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|84489150|ref|YP_447382.1| - 1.5e-06 27.5 0.0 4.2e-06 26.1 0.0 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|84489150|ref|YP_447382.1| - 3.4e-05 22.9 0.0 0.0016 17.4 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class I and II GDC-P PF02347.11 gi|84489150|ref|YP_447382.1| - 0.00078 18.2 0.1 0.0038 15.9 0.1 1.9 2 0 0 2 2 2 1 Glycine cleavage system P-protein ThiS PF02597.15 gi|84489151|ref|YP_447383.1| - 3.2e-10 40.2 0.5 3.6e-10 40.1 0.4 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.1 gi|84489151|ref|YP_447383.1| - 0.001 18.8 5.6 0.0012 18.6 3.9 1.2 1 0 0 1 1 1 1 ThiS-like ubiquitin TGS PF02824.16 gi|84489151|ref|YP_447383.1| - 0.019 14.7 0.6 0.033 14.0 0.4 1.6 1 1 0 1 1 1 0 TGS domain Ub-RnfH PF03658.9 gi|84489151|ref|YP_447383.1| - 0.05 13.4 1.0 0.13 12.1 0.7 1.6 1 1 0 1 1 1 0 RnfH family Ubiquitin DbpA PF03880.10 gi|84489151|ref|YP_447383.1| - 0.052 13.2 1.1 0.064 12.9 0.8 1.3 1 1 0 1 1 1 0 DbpA RNA binding domain Ub-Mut7C PF14451.1 gi|84489151|ref|YP_447383.1| - 0.1 12.1 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Mut7-C ubiquitin ATP_bind_3 PF01171.15 gi|84489152|ref|YP_447384.1| - 9.5e-17 61.0 0.0 1.8e-16 60.1 0.0 1.5 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|84489152|ref|YP_447384.1| - 1.6e-07 30.2 0.2 2.5e-07 29.6 0.2 1.3 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|84489152|ref|YP_447384.1| - 0.00026 20.0 0.2 0.00038 19.4 0.2 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|84489152|ref|YP_447384.1| - 0.0028 16.9 0.1 0.0028 16.9 0.1 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|84489152|ref|YP_447384.1| - 0.003 17.1 0.0 0.0044 16.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase PAPS_reduct PF01507.14 gi|84489152|ref|YP_447384.1| - 0.039 13.7 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family zf-C4pol PF14260.1 gi|84489152|ref|YP_447384.1| - 9.1 6.3 16.2 12 5.9 0.1 3.9 3 1 1 4 4 4 0 C4-type zinc-finger of DNA polymerase delta DUF4268 PF14088.1 gi|84489153|ref|YP_447385.1| - 2.6e-34 117.8 3.4 2.6e-34 117.8 2.3 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4268) Pterin_bind PF00809.17 gi|84489154|ref|YP_447386.1| - 3.8e-22 78.6 0.6 7.2e-22 77.7 0.0 1.8 2 0 0 2 2 2 1 Pterin binding enzyme DUF4346 PF14251.1 gi|84489154|ref|YP_447386.1| - 5.3e-10 39.0 0.4 1.3e-09 37.8 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) DUF561 PF04481.7 gi|84489154|ref|YP_447386.1| - 3.9e-05 22.7 0.5 0.00011 21.2 0.0 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF561) POR PF01558.13 gi|84489155|ref|YP_447387.1| - 3.3e-36 124.7 0.2 3.8e-36 124.5 0.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase DUF1805 PF08827.6 gi|84489155|ref|YP_447387.1| - 0.086 12.6 0.2 0.26 11.1 0.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF1805) Fer4 PF00037.22 gi|84489156|ref|YP_447388.1| - 3.6e-16 58.0 17.4 4.2e-09 35.6 2.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489156|ref|YP_447388.1| - 1.8e-13 50.1 24.2 6e-10 38.8 9.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489156|ref|YP_447388.1| - 1e-10 41.8 34.9 7.4e-07 29.4 9.0 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489156|ref|YP_447388.1| - 1.5e-10 40.4 17.5 3.4e-05 23.5 3.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489156|ref|YP_447388.1| - 3.4e-10 39.5 24.4 1.2e-07 31.4 9.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489156|ref|YP_447388.1| - 9.5e-10 37.8 11.7 2e-05 24.2 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84489156|ref|YP_447388.1| - 1.1e-08 35.1 24.0 5e-06 26.6 9.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489156|ref|YP_447388.1| - 5.2e-08 33.5 11.8 0.00013 22.6 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|84489156|ref|YP_447388.1| - 1.1e-05 25.3 14.5 0.00053 20.1 1.8 2.3 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84489156|ref|YP_447388.1| - 2.3e-05 24.6 13.4 0.00016 22.0 0.8 3.0 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|84489156|ref|YP_447388.1| - 5.4e-05 23.1 11.5 0.012 15.6 8.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489156|ref|YP_447388.1| - 6e-05 23.3 11.1 0.0057 17.0 0.5 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489156|ref|YP_447388.1| - 0.00013 22.2 11.8 0.013 15.8 1.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489156|ref|YP_447388.1| - 0.0021 18.5 18.5 0.17 12.4 3.5 3.1 2 2 1 3 3 3 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84489156|ref|YP_447388.1| - 0.015 15.7 20.7 0.036 14.6 4.5 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain POR_N PF01855.14 gi|84489157|ref|YP_447389.1| - 1.2e-72 244.2 0.4 1.4e-72 243.8 0.3 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|84489157|ref|YP_447389.1| - 4.8e-06 26.5 0.1 1.2e-05 25.2 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.13 gi|84489157|ref|YP_447389.1| - 0.0076 15.7 0.2 0.013 15.0 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|84489158|ref|YP_447390.1| - 1.5e-29 102.5 0.2 1.5e-29 102.5 0.1 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|84489158|ref|YP_447390.1| - 0.0025 16.7 0.8 0.052 12.4 0.5 2.2 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Fumerase PF05681.9 gi|84489159|ref|YP_447391.1| - 4.6e-98 327.6 0.3 5.1e-98 327.4 0.2 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) PhoU PF01895.14 gi|84489160|ref|YP_447392.1| - 3.9e-27 94.5 9.2 5.3e-16 58.8 0.7 2.2 2 0 0 2 2 2 2 PhoU domain DUF4375 PF14300.1 gi|84489160|ref|YP_447392.1| - 0.12 12.3 2.4 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) HD_assoc PF13286.1 gi|84489160|ref|YP_447392.1| - 0.14 12.4 1.5 1 9.6 0.1 2.3 2 1 0 2 2 2 0 Phosphohydrolase-associated domain MutS_III PF05192.13 gi|84489160|ref|YP_447392.1| - 2 8.1 4.8 7.9 6.1 3.3 1.9 1 1 0 1 1 1 0 MutS domain III ABC_tran PF00005.22 gi|84489161|ref|YP_447393.1| - 5.3e-32 110.9 0.0 7.4e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489161|ref|YP_447393.1| - 3.4e-14 53.4 0.1 2.3e-07 31.1 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|84489161|ref|YP_447393.1| - 5.3e-08 32.3 1.7 8.7e-07 28.3 1.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|84489161|ref|YP_447393.1| - 2.4e-05 23.5 0.0 5.4e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|84489161|ref|YP_447393.1| - 2.8e-05 24.2 0.0 7e-05 22.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|84489161|ref|YP_447393.1| - 0.00047 19.6 0.0 0.00088 18.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Adeno_IVa2 PF02456.10 gi|84489161|ref|YP_447393.1| - 0.0015 17.2 0.1 0.0059 15.3 0.0 1.8 2 0 0 2 2 2 1 Adenovirus IVa2 protein AAA_17 PF13207.1 gi|84489161|ref|YP_447393.1| - 0.0018 19.0 0.1 0.0033 18.2 0.1 1.6 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|84489161|ref|YP_447393.1| - 0.0019 17.9 1.1 0.0092 15.6 0.8 2.1 1 1 0 1 1 1 1 Archaeal ATPase AAA_23 PF13476.1 gi|84489161|ref|YP_447393.1| - 0.0025 18.1 4.6 0.012 15.8 3.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|84489161|ref|YP_447393.1| - 0.0032 17.4 0.1 0.013 15.4 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|84489161|ref|YP_447393.1| - 0.0033 16.5 6.6 0.18 10.7 1.2 2.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 gi|84489161|ref|YP_447393.1| - 0.0051 17.1 0.1 0.016 15.4 0.0 1.9 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.1 gi|84489161|ref|YP_447393.1| - 0.0078 16.0 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|84489161|ref|YP_447393.1| - 0.01 15.7 0.2 0.044 13.6 0.0 2.1 2 1 0 2 2 2 0 AAA domain Rad17 PF03215.10 gi|84489161|ref|YP_447393.1| - 0.019 13.7 0.0 0.034 12.8 0.0 1.3 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA PF00004.24 gi|84489161|ref|YP_447393.1| - 0.019 15.1 0.1 0.12 12.5 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 gi|84489161|ref|YP_447393.1| - 0.025 13.9 0.0 0.068 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_PrkA PF08298.6 gi|84489161|ref|YP_447393.1| - 0.037 12.7 0.0 0.47 9.0 0.0 2.0 1 1 0 2 2 2 0 PrkA AAA domain AAA_10 PF12846.2 gi|84489161|ref|YP_447393.1| - 0.039 13.3 0.1 0.097 12.0 0.0 1.7 2 0 0 2 2 2 0 AAA-like domain FtsK_SpoIIIE PF01580.13 gi|84489161|ref|YP_447393.1| - 0.047 13.1 0.0 0.083 12.3 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family RNA_helicase PF00910.17 gi|84489161|ref|YP_447393.1| - 0.072 13.2 0.0 0.25 11.5 0.0 2.0 2 1 0 2 2 2 0 RNA helicase NACHT PF05729.7 gi|84489161|ref|YP_447393.1| - 0.076 12.6 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain PRK PF00485.13 gi|84489161|ref|YP_447393.1| - 0.082 12.4 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.1 gi|84489161|ref|YP_447393.1| - 0.1 12.5 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|84489161|ref|YP_447393.1| - 0.11 12.3 0.0 1.4 8.7 0.0 2.2 2 0 0 2 2 2 0 Part of AAA domain AAA_5 PF07728.9 gi|84489161|ref|YP_447393.1| - 0.11 12.2 0.0 0.34 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) BPD_transp_1 PF00528.17 gi|84489162|ref|YP_447394.1| - 1.5e-27 96.3 13.2 1.5e-27 96.3 9.1 2.3 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|84489163|ref|YP_447395.1| - 7.8e-24 84.1 23.2 7.8e-24 84.1 16.1 2.2 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component PBP_like_2 PF12849.2 gi|84489164|ref|YP_447396.1| - 4.9e-38 131.1 8.7 8.5e-38 130.4 6.1 1.3 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.2 gi|84489164|ref|YP_447396.1| - 1.1e-18 66.9 0.1 1.4e-18 66.5 0.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|84489164|ref|YP_447396.1| - 4.7e-10 39.5 0.1 6.4e-10 39.0 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.1 gi|84489164|ref|YP_447396.1| - 0.0017 18.1 0.8 0.012 15.4 0.0 2.0 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.1 gi|84489164|ref|YP_447396.1| - 0.0023 17.2 0.0 0.0032 16.8 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF3139 PF11337.3 gi|84489164|ref|YP_447396.1| - 0.3 11.4 2.2 2.9 8.2 0.1 3.1 3 1 1 4 4 4 0 Protein of unknown function (DUF3139) PhoU PF01895.14 gi|84489165|ref|YP_447397.1| - 7.9e-25 87.1 8.3 2.1e-12 47.3 1.4 2.7 3 0 0 3 3 3 2 PhoU domain HTH_24 PF13412.1 gi|84489165|ref|YP_447397.1| - 1.3e-08 34.0 1.0 2.6e-08 33.1 0.7 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.1 gi|84489165|ref|YP_447397.1| - 2.7e-05 23.8 0.0 6.8e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.17 gi|84489165|ref|YP_447397.1| - 3.8e-05 23.3 0.1 0.0001 21.9 0.0 1.7 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.12 gi|84489165|ref|YP_447397.1| - 5.7e-05 22.5 0.4 5.7e-05 22.5 0.3 2.7 3 1 0 3 3 3 1 TFIIE alpha subunit TrmB PF01978.14 gi|84489165|ref|YP_447397.1| - 0.00024 20.7 0.1 0.00064 19.3 0.1 1.8 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|84489165|ref|YP_447397.1| - 0.0004 19.9 0.0 0.00073 19.1 0.0 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|84489165|ref|YP_447397.1| - 0.00095 19.2 0.2 0.0044 17.0 0.0 2.1 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.7 gi|84489165|ref|YP_447397.1| - 0.0011 18.6 0.1 0.0027 17.2 0.1 1.7 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.11 gi|84489165|ref|YP_447397.1| - 0.0044 16.2 0.0 0.013 14.8 0.0 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|84489165|ref|YP_447397.1| - 0.0067 16.0 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_3 PF01381.17 gi|84489165|ref|YP_447397.1| - 0.015 15.1 0.1 0.051 13.4 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.2 gi|84489165|ref|YP_447397.1| - 0.028 14.4 0.6 0.11 12.5 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|84489165|ref|YP_447397.1| - 0.052 13.4 0.2 0.35 10.7 0.0 2.3 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC Arg_repressor PF01316.16 gi|84489165|ref|YP_447397.1| - 0.064 12.8 1.5 0.59 9.7 0.1 2.8 3 1 0 3 3 3 0 Arginine repressor, DNA binding domain UPF0029 PF01205.14 gi|84489166|ref|YP_447398.1| - 8.7e-26 89.7 0.0 1e-25 89.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF2663 PF10864.3 gi|84489167|ref|YP_447399.1| - 0.0075 16.4 0.2 0.0075 16.4 0.1 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2663) Pex24p PF06398.6 gi|84489167|ref|YP_447399.1| - 0.023 13.5 3.8 0.043 12.6 0.3 2.1 1 1 1 2 2 2 0 Integral peroxisomal membrane peroxin IncA PF04156.9 gi|84489167|ref|YP_447399.1| - 0.97 8.9 5.6 24 4.4 0.0 2.7 2 1 1 3 3 3 0 IncA protein UPF0233 PF06781.7 gi|84489167|ref|YP_447399.1| - 1.9 8.1 9.4 0.69 9.5 0.0 2.7 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0233) DUF3185 PF11381.3 gi|84489167|ref|YP_447399.1| - 5 6.9 14.6 0.1 12.3 1.0 3.3 3 1 1 4 4 4 0 Protein of unknown function (DUF3185) MutS_V PF00488.16 gi|84489168|ref|YP_447400.1| - 1e-12 47.9 0.1 1.7e-12 47.2 0.1 1.4 1 0 0 1 1 1 1 MutS domain V AAA_14 PF13173.1 gi|84489168|ref|YP_447400.1| - 1.3e-07 31.6 0.1 1.3e-07 31.6 0.1 3.5 3 1 1 4 4 4 1 AAA domain HHH_5 PF14520.1 gi|84489168|ref|YP_447400.1| - 9e-05 22.5 0.0 0.00038 20.5 0.0 2.1 2 0 0 2 2 1 1 Helix-hairpin-helix domain AAA_28 PF13521.1 gi|84489168|ref|YP_447400.1| - 0.00079 19.4 0.2 0.002 18.1 0.2 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|84489168|ref|YP_447400.1| - 0.0012 18.9 2.5 0.0076 16.4 0.2 2.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.1 gi|84489168|ref|YP_447400.1| - 0.0027 18.0 0.2 0.0027 18.0 0.2 4.0 2 1 2 4 4 4 1 AAA domain AAA_29 PF13555.1 gi|84489168|ref|YP_447400.1| - 0.035 13.6 0.0 0.069 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|84489168|ref|YP_447400.1| - 0.039 14.0 0.5 0.81 9.8 0.3 2.9 1 1 0 1 1 1 0 AAA domain HHH PF00633.18 gi|84489168|ref|YP_447400.1| - 0.06 13.0 0.0 2.3 8.1 0.0 2.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif Dynamin_N PF00350.18 gi|84489168|ref|YP_447400.1| - 0.1 12.4 0.0 0.1 12.4 0.0 2.7 3 0 0 3 3 3 0 Dynamin family CPT PF07931.7 gi|84489168|ref|YP_447400.1| - 0.11 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein GBP PF02263.14 gi|84489168|ref|YP_447400.1| - 0.13 11.2 4.6 0.39 9.7 3.1 1.9 1 1 0 1 1 1 0 Guanylate-binding protein, N-terminal domain AAA_17 PF13207.1 gi|84489168|ref|YP_447400.1| - 0.22 12.3 6.3 0.22 12.3 0.0 3.7 2 2 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|84489168|ref|YP_447400.1| - 0.28 11.4 0.0 0.28 11.4 0.0 2.4 3 1 0 3 3 2 0 ABC transporter DUF4473 PF14747.1 gi|84489168|ref|YP_447400.1| - 0.44 10.7 4.7 5.8 7.2 0.2 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4473) TauE PF01925.14 gi|84489169|ref|YP_447401.1| - 8.9e-43 146.4 28.1 1.1e-42 146.2 19.5 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE GtrA PF04138.9 gi|84489169|ref|YP_447401.1| - 0.015 15.2 1.6 0.015 15.2 1.1 3.1 2 1 0 2 2 2 0 GtrA-like protein PGG PF13962.1 gi|84489169|ref|YP_447401.1| - 0.12 11.9 0.1 0.12 11.9 0.0 2.5 2 2 2 4 4 4 0 Domain of unknown function Peptidase_U32 PF01136.14 gi|84489170|ref|YP_447402.1| - 4.6e-76 254.8 0.1 2.2e-68 229.6 0.0 2.4 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|84489170|ref|YP_447402.1| - 1.8e-22 79.6 0.0 3.1e-22 78.9 0.0 1.4 1 0 0 1 1 1 1 Collagenase DUF2408 PF10303.4 gi|84489170|ref|YP_447402.1| - 0.0061 16.6 3.1 0.0061 16.6 2.1 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2408) Thymidylate_kin PF02223.12 gi|84489171|ref|YP_447403.1| - 3.1e-48 163.6 1.1 3.5e-48 163.4 0.8 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.1 gi|84489171|ref|YP_447403.1| - 3.7e-06 26.9 0.0 4.9e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489171|ref|YP_447403.1| - 6.7e-05 23.2 3.4 0.00013 22.2 0.7 2.0 1 1 1 2 2 2 1 AAA domain SRP54 PF00448.17 gi|84489171|ref|YP_447403.1| - 0.00031 20.2 0.1 0.0013 18.1 0.0 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_22 PF13401.1 gi|84489171|ref|YP_447403.1| - 0.0025 17.9 0.3 0.0042 17.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|84489171|ref|YP_447403.1| - 0.0034 18.1 0.1 0.0075 17.0 0.1 1.6 1 1 0 1 1 1 1 AAA domain PPK2 PF03976.9 gi|84489171|ref|YP_447403.1| - 0.01 15.1 0.2 0.036 13.3 0.0 1.9 3 0 0 3 3 3 0 Polyphosphate kinase 2 (PPK2) NTPase_1 PF03266.10 gi|84489171|ref|YP_447403.1| - 0.016 14.9 0.5 0.038 13.7 0.1 1.8 2 0 0 2 2 2 0 NTPase ArgK PF03308.11 gi|84489171|ref|YP_447403.1| - 0.036 12.8 0.0 0.054 12.2 0.0 1.3 1 0 0 1 1 1 0 ArgK protein MobB PF03205.9 gi|84489171|ref|YP_447403.1| - 0.036 13.7 1.4 0.04 13.6 0.1 1.9 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Ish1 PF10281.4 gi|84489171|ref|YP_447403.1| - 0.05 13.6 0.2 1.3 9.1 0.0 2.8 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein AAA_5 PF07728.9 gi|84489171|ref|YP_447403.1| - 0.052 13.2 0.3 0.16 11.7 0.1 1.9 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.12 gi|84489171|ref|YP_447403.1| - 0.052 13.0 0.1 0.1 12.0 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_3 PF07726.6 gi|84489171|ref|YP_447403.1| - 0.098 12.2 0.1 0.17 11.5 0.1 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) HTH_19 PF12844.2 gi|84489171|ref|YP_447403.1| - 0.39 10.8 2.3 29 4.8 0.0 3.3 2 1 0 2 2 2 0 Helix-turn-helix domain LpxK PF02606.9 gi|84489171|ref|YP_447403.1| - 0.58 9.0 2.4 6.1 5.6 0.1 2.1 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_14 PF13173.1 gi|84489171|ref|YP_447403.1| - 1.8 8.4 4.9 0.78 9.6 0.3 2.2 1 1 1 2 2 2 0 AAA domain tRNA-synt_1b PF00579.20 gi|84489173|ref|YP_447405.1| - 2.2e-48 164.8 0.1 2.6e-48 164.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|84489173|ref|YP_447405.1| - 7e-06 24.9 0.0 0.011 14.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) NMD3 PF04981.8 gi|84489174|ref|YP_447406.1| - 7.2e-57 192.2 2.3 9.1e-57 191.8 1.6 1.1 1 0 0 1 1 1 1 NMD3 family S1_2 PF13509.1 gi|84489174|ref|YP_447406.1| - 0.04 13.8 0.1 0.11 12.4 0.1 1.7 1 0 0 1 1 1 0 S1 domain zinc_ribbon_2 PF13240.1 gi|84489174|ref|YP_447406.1| - 0.1 12.1 0.4 0.3 10.6 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain GFA PF04828.9 gi|84489174|ref|YP_447406.1| - 0.18 11.7 1.1 25 4.8 0.0 2.7 2 1 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ribbon_3 PF13248.1 gi|84489174|ref|YP_447406.1| - 0.23 10.7 1.4 0.64 9.3 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|84489174|ref|YP_447406.1| - 2.6 8.0 4.7 0.9 9.5 0.5 2.2 2 0 0 2 2 2 0 Zinc ribbon domain eIF-5_eIF-2B PF01873.12 gi|84489175|ref|YP_447407.1| - 2.6e-43 146.6 0.1 3.1e-43 146.4 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Elf1 PF05129.8 gi|84489175|ref|YP_447407.1| - 0.028 14.0 0.3 0.054 13.1 0.2 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like SUI1 PF01253.17 gi|84489175|ref|YP_447407.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Translation initiation factor SUI1 DUF2387 PF09526.5 gi|84489175|ref|YP_447407.1| - 0.14 12.0 0.7 0.25 11.3 0.5 1.4 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zf-RING_3 PF14369.1 gi|84489175|ref|YP_447407.1| - 0.19 11.7 1.7 0.32 11.0 1.1 1.3 1 0 0 1 1 1 0 zinc-finger DNA_RNApol_7kD PF03604.8 gi|84489175|ref|YP_447407.1| - 0.61 9.5 3.1 1.6 8.2 2.1 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit MCM PF00493.18 gi|84489176|ref|YP_447408.1| - 5.5e-136 452.7 0.1 7.7e-136 452.2 0.0 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 gi|84489176|ref|YP_447408.1| - 9e-09 35.8 2.6 1.9e-08 34.8 0.0 2.8 3 1 0 3 3 3 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|84489176|ref|YP_447408.1| - 6.2e-08 32.0 0.0 0.00022 20.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|84489176|ref|YP_447408.1| - 0.00059 19.5 0.1 0.0041 16.8 0.0 2.5 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) HypA PF01155.14 gi|84489176|ref|YP_447408.1| - 0.0026 17.4 0.1 0.0059 16.2 0.1 1.6 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Sigma54_activat PF00158.21 gi|84489176|ref|YP_447408.1| - 0.0032 16.9 0.1 2.7 7.4 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain Zn-ribbon_8 PF09723.5 gi|84489176|ref|YP_447408.1| - 0.0047 16.8 1.3 0.011 15.6 0.9 1.7 1 0 0 1 1 1 1 Zinc ribbon domain AAA_3 PF07726.6 gi|84489176|ref|YP_447408.1| - 0.006 16.1 0.0 0.094 12.3 0.0 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|84489176|ref|YP_447408.1| - 0.0084 16.1 1.0 0.38 10.7 0.0 3.0 2 1 1 3 3 3 1 AAA ATPase domain GntR PF00392.16 gi|84489176|ref|YP_447408.1| - 0.014 14.8 0.0 0.075 12.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family AAA_22 PF13401.1 gi|84489176|ref|YP_447408.1| - 0.02 15.0 0.1 0.095 12.8 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|84489176|ref|YP_447408.1| - 0.041 14.1 3.4 0.055 13.7 0.0 3.0 4 0 0 4 4 4 0 AAA domain AAA PF00004.24 gi|84489176|ref|YP_447408.1| - 0.045 13.9 0.1 0.58 10.3 0.0 3.0 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) DUF4072 PF13284.1 gi|84489176|ref|YP_447408.1| - 0.067 13.3 0.6 0.18 11.9 0.4 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4072) tRNA_anti-codon PF01336.20 gi|84489176|ref|YP_447408.1| - 0.067 13.0 0.3 0.33 10.8 0.0 2.3 3 0 0 3 3 2 0 OB-fold nucleic acid binding domain RPA_C PF08784.6 gi|84489176|ref|YP_447408.1| - 0.12 12.8 0.0 0.26 11.7 0.0 1.6 1 0 0 1 1 1 0 Replication protein A C terminal FtsK_SpoIIIE PF01580.13 gi|84489176|ref|YP_447408.1| - 0.13 11.6 0.4 1 8.8 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_tran PF00005.22 gi|84489176|ref|YP_447408.1| - 0.17 12.1 2.2 1.6 9.0 0.2 3.1 3 1 1 4 4 4 0 ABC transporter Serendipity_A PF05482.7 gi|84489177|ref|YP_447409.1| - 0.0014 17.1 1.2 0.0016 16.9 0.9 1.0 1 0 0 1 1 1 1 Serendipity locus alpha protein (SRY-A) NPV_P10 PF05531.7 gi|84489177|ref|YP_447409.1| - 0.0019 18.4 1.0 0.012 15.8 0.7 2.2 1 1 0 1 1 1 1 Nucleopolyhedrovirus P10 protein Mnd1 PF03962.10 gi|84489177|ref|YP_447409.1| - 0.0023 17.6 2.1 0.0028 17.3 1.5 1.1 1 0 0 1 1 1 1 Mnd1 family YcbB PF08664.5 gi|84489177|ref|YP_447409.1| - 0.0023 17.6 0.3 0.0063 16.3 0.0 1.7 1 1 1 2 2 2 1 YcbB domain UPF0118 PF01594.11 gi|84489177|ref|YP_447409.1| - 0.015 14.3 0.5 0.017 14.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF20 HsbA PF12296.3 gi|84489177|ref|YP_447409.1| - 0.015 15.1 2.9 0.089 12.6 0.8 2.8 1 1 2 3 3 3 0 Hydrophobic surface binding protein A DUF4201 PF13870.1 gi|84489177|ref|YP_447409.1| - 0.019 14.3 2.9 0.021 14.2 0.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Syntaxin-6_N PF09177.6 gi|84489177|ref|YP_447409.1| - 0.019 15.3 5.5 0.045 14.1 3.8 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Cep57_MT_bd PF06657.8 gi|84489177|ref|YP_447409.1| - 0.032 14.1 0.8 0.66 9.9 0.1 2.4 1 1 2 3 3 3 0 Centrosome microtubule-binding domain of Cep57 LUC7 PF03194.10 gi|84489177|ref|YP_447409.1| - 0.034 13.6 1.4 0.042 13.3 1.0 1.1 1 0 0 1 1 1 0 LUC7 N_terminus DUF972 PF06156.8 gi|84489177|ref|YP_447409.1| - 0.063 13.6 3.3 0.097 13.0 2.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF972) LMBR1 PF04791.11 gi|84489177|ref|YP_447409.1| - 0.08 11.5 1.4 0.091 11.3 1.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TarH PF02203.10 gi|84489177|ref|YP_447409.1| - 0.091 12.6 5.0 0.65 9.8 3.5 2.0 1 1 0 1 1 1 0 Tar ligand binding domain homologue FlxA PF14282.1 gi|84489177|ref|YP_447409.1| - 0.17 11.8 7.3 0.4 10.6 5.0 1.6 1 1 0 1 1 1 0 FlxA-like protein RuBisCO_large PF00016.15 gi|84489177|ref|YP_447409.1| - 0.2 10.4 0.9 0.93 8.2 0.1 1.8 1 1 1 2 2 2 0 Ribulose bisphosphate carboxylase large chain, catalytic domain Seryl_tRNA_N PF02403.17 gi|84489177|ref|YP_447409.1| - 0.32 11.0 7.0 7.2 6.6 3.2 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Fib_alpha PF08702.5 gi|84489177|ref|YP_447409.1| - 1 9.4 6.5 0.51 10.4 2.4 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Peptidase_S49_N PF08496.5 gi|84489177|ref|YP_447409.1| - 1.1 9.0 4.4 2.7 7.7 0.6 2.1 1 1 1 2 2 2 0 Peptidase family S49 N-terminal FtsJ PF01728.14 gi|84489178|ref|YP_447410.1| - 5.4e-53 179.6 0.0 6.3e-53 179.4 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.1 gi|84489178|ref|YP_447410.1| - 8.3e-05 22.2 0.6 0.00085 18.9 0.4 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltrans_Mon PF14314.1 gi|84489178|ref|YP_447410.1| - 0.0017 16.2 0.0 0.0027 15.6 0.0 1.2 1 0 0 1 1 1 1 Virus-capping methyltransferase Myb_DNA-bind_3 PF12776.2 gi|84489178|ref|YP_447410.1| - 0.0019 18.7 2.9 1.1 9.8 0.1 2.3 2 0 0 2 2 2 2 Myb/SANT-like DNA-binding domain Methyltransf_23 PF13489.1 gi|84489178|ref|YP_447410.1| - 0.009 15.7 0.0 0.014 15.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|84489178|ref|YP_447410.1| - 0.054 13.0 0.1 0.11 11.9 0.0 1.5 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Myb_DNA-bind_4 PF13837.1 gi|84489178|ref|YP_447410.1| - 0.34 11.0 2.6 3.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain DUF573 PF04504.9 gi|84489178|ref|YP_447410.1| - 1.6 9.0 4.9 0.84 9.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function, DUF573 Metallophos_2 PF12850.2 gi|84489179|ref|YP_447411.1| - 1.2e-33 116.2 0.0 1.3e-33 116.0 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84489179|ref|YP_447411.1| - 4.7e-08 32.6 0.3 0.00053 19.4 0.1 2.3 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Topoisom_bac PF01131.15 gi|84489180|ref|YP_447412.1| - 6.6e-110 367.6 11.1 8.5e-110 367.3 7.7 1.1 1 0 0 1 1 1 1 DNA topoisomerase zf-C4_Topoisom PF01396.14 gi|84489180|ref|YP_447412.1| - 1.9e-26 91.2 19.5 6e-16 57.6 1.0 3.5 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger Toprim PF01751.17 gi|84489180|ref|YP_447412.1| - 5e-15 55.2 0.4 1.6e-14 53.6 0.0 2.1 2 0 0 2 2 2 1 Toprim domain DUF4263 PF14082.1 gi|84489180|ref|YP_447412.1| - 0.00023 21.1 1.7 0.014 15.3 0.0 3.2 3 0 0 3 3 3 1 Domain of unknown function (DUF4263) DUF1272 PF06906.6 gi|84489180|ref|YP_447412.1| - 0.0049 16.6 1.8 0.012 15.4 1.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) Auto_anti-p27 PF06677.7 gi|84489180|ref|YP_447412.1| - 0.0071 16.0 2.8 0.0083 15.8 0.1 2.2 2 0 0 2 2 2 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) ADK_lid PF05191.9 gi|84489180|ref|YP_447412.1| - 0.24 11.0 6.4 13 5.5 0.2 3.6 3 0 0 3 3 3 0 Adenylate kinase, active site lid DEAD PF00270.24 gi|84489181|ref|YP_447413.1| - 2.6e-25 88.8 0.0 1.3e-24 86.5 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase DUF1998 PF09369.5 gi|84489181|ref|YP_447413.1| - 2.6e-16 59.9 0.0 6.7e-16 58.6 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.26 gi|84489181|ref|YP_447413.1| - 6.7e-13 48.3 0.0 3.3e-12 46.1 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|84489181|ref|YP_447413.1| - 7.5e-07 29.1 0.1 2.1e-06 27.6 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit STT3 PF02516.9 gi|84489182|ref|YP_447414.1| - 3.5e-79 267.0 19.4 5.6e-77 259.7 13.4 2.3 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF937 PF06078.6 gi|84489182|ref|YP_447414.1| - 0.038 14.2 0.1 0.11 12.7 0.1 1.7 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF937) Rad51 PF08423.6 gi|84489183|ref|YP_447415.1| - 7.4e-30 103.6 0.0 8.8e-30 103.4 0.0 1.0 1 0 0 1 1 1 1 Rad51 RecA PF00154.16 gi|84489183|ref|YP_447415.1| - 2.4e-19 69.5 0.1 3.2e-19 69.1 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.1 gi|84489183|ref|YP_447415.1| - 3.6e-17 62.4 0.0 5.1e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain KaiC PF06745.8 gi|84489183|ref|YP_447415.1| - 1.9e-12 46.7 0.5 2.3e-12 46.5 0.3 1.1 1 0 0 1 1 1 1 KaiC Zot PF05707.7 gi|84489183|ref|YP_447415.1| - 3.8e-06 26.5 0.0 5.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA PF00004.24 gi|84489183|ref|YP_447415.1| - 5.2e-06 26.6 0.0 9e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|84489183|ref|YP_447415.1| - 2.1e-05 24.1 0.3 0.014 14.8 0.0 2.7 1 1 2 3 3 3 2 AAA-like domain DUF2075 PF09848.4 gi|84489183|ref|YP_447415.1| - 2.7e-05 23.3 0.0 3.2e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|84489183|ref|YP_447415.1| - 2.9e-05 24.2 0.0 5.8e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|84489183|ref|YP_447415.1| - 0.00014 21.3 0.3 0.00085 18.7 0.0 2.2 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_24 PF13479.1 gi|84489183|ref|YP_447415.1| - 0.00015 21.4 0.3 0.0006 19.4 0.1 1.9 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|84489183|ref|YP_447415.1| - 0.00019 21.7 0.3 0.0004 20.6 0.2 1.6 1 1 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.4 gi|84489183|ref|YP_447415.1| - 0.00059 18.5 0.0 0.0011 17.7 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DnaB_C PF03796.10 gi|84489183|ref|YP_447415.1| - 0.00076 18.4 2.1 0.18 10.6 1.3 2.1 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain Arch_ATPase PF01637.13 gi|84489183|ref|YP_447415.1| - 0.0016 18.1 0.1 0.0026 17.5 0.1 1.3 1 0 0 1 1 1 1 Archaeal ATPase AAA_17 PF13207.1 gi|84489183|ref|YP_447415.1| - 0.02 15.7 0.8 0.055 14.2 0.6 1.9 1 1 0 1 1 1 0 AAA domain MobB PF03205.9 gi|84489183|ref|YP_447415.1| - 0.029 14.0 0.0 0.05 13.3 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.22 gi|84489183|ref|YP_447415.1| - 0.04 14.2 0.0 0.059 13.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_19 PF13245.1 gi|84489183|ref|YP_447415.1| - 0.053 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain cobW PF02492.14 gi|84489183|ref|YP_447415.1| - 0.25 10.7 1.0 0.83 9.0 0.0 2.2 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Aminotran_1_2 PF00155.16 gi|84489184|ref|YP_447416.1| - 1.3e-39 136.1 0.0 1.8e-39 135.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|84489184|ref|YP_447416.1| - 8.2e-06 24.7 0.0 0.031 13.0 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|84489184|ref|YP_447416.1| - 2.4e-05 23.6 0.0 4.1e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Alliinase_C PF04864.8 gi|84489184|ref|YP_447416.1| - 0.014 14.1 0.0 0.074 11.6 0.0 2.0 2 0 0 2 2 2 0 Allinase Glyco_hydro_20 PF00728.17 gi|84489184|ref|YP_447416.1| - 0.095 11.8 0.1 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, catalytic domain EFG_C PF00679.19 gi|84489184|ref|YP_447416.1| - 0.13 12.1 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Elongation factor G C-terminus PRC PF05239.11 gi|84489185|ref|YP_447417.1| - 1.6e-10 40.7 0.7 2e-10 40.3 0.5 1.2 1 0 0 1 1 1 1 PRC-barrel domain Radical_SAM PF04055.16 gi|84489186|ref|YP_447418.1| - 1.5e-15 57.7 0.3 3.3e-15 56.6 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|84489186|ref|YP_447418.1| - 1.1e-05 25.3 0.1 4.9e-05 23.2 0.0 2.2 2 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|84489186|ref|YP_447418.1| - 0.013 15.6 0.5 0.049 13.7 0.2 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain GHMP_kinases_C PF08544.8 gi|84489187|ref|YP_447419.1| - 9.1e-07 28.9 0.0 1.6e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal GHMP_kinases_N PF00288.21 gi|84489187|ref|YP_447419.1| - 0.0031 17.5 0.0 0.0064 16.5 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain Aconitase_C PF00694.14 gi|84489188|ref|YP_447420.1| - 9.4e-20 71.0 1.0 4.6e-19 68.8 0.2 2.1 2 1 1 3 3 3 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|84489188|ref|YP_447420.1| - 0.0015 17.9 1.7 0.0034 16.8 1.2 1.6 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Lar_restr_allev PF14354.1 gi|84489189|ref|YP_447421.1| - 2.3e-05 24.5 1.0 6e-05 23.2 0.3 1.9 2 0 0 2 2 2 1 Restriction alleviation protein Lar Rubredoxin PF00301.15 gi|84489189|ref|YP_447421.1| - 0.0047 16.7 0.8 0.22 11.4 0.0 2.5 2 0 0 2 2 2 1 Rubredoxin PHD PF00628.24 gi|84489189|ref|YP_447421.1| - 0.017 14.7 0.9 0.017 14.7 0.6 1.7 2 0 0 2 2 1 0 PHD-finger DUF2387 PF09526.5 gi|84489189|ref|YP_447421.1| - 0.027 14.3 1.8 0.044 13.7 0.4 1.9 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) Zn_Tnp_IS1595 PF12760.2 gi|84489189|ref|YP_447421.1| - 0.042 13.6 0.6 0.21 11.4 0.1 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-DNA_Pol PF08996.5 gi|84489189|ref|YP_447421.1| - 0.043 13.1 0.1 0.074 12.4 0.1 1.4 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger ADK_lid PF05191.9 gi|84489189|ref|YP_447421.1| - 0.072 12.7 1.6 1.4 8.6 0.1 2.4 2 0 0 2 2 2 0 Adenylate kinase, active site lid OrfB_Zn_ribbon PF07282.6 gi|84489189|ref|YP_447421.1| - 0.083 12.5 0.7 0.083 12.5 0.5 1.9 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-RING_2 PF13639.1 gi|84489189|ref|YP_447421.1| - 0.09 12.6 0.4 0.09 12.6 0.3 1.9 2 0 0 2 2 2 0 Ring finger domain GCC2_GCC3 PF07699.8 gi|84489189|ref|YP_447421.1| - 0.22 11.1 3.0 1.3 8.6 0.2 2.2 2 0 0 2 2 2 0 GCC2 and GCC3 zf-CSL PF05207.8 gi|84489189|ref|YP_447421.1| - 0.3 10.6 3.1 0.13 11.7 0.3 1.8 2 0 0 2 2 2 0 CSL zinc finger Prok-RING_1 PF14446.1 gi|84489189|ref|YP_447421.1| - 0.44 10.3 0.1 0.44 10.3 0.1 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.5 gi|84489189|ref|YP_447421.1| - 0.5 10.3 2.7 20 5.2 0.1 3.0 3 0 0 3 3 3 0 Zinc ribbon domain zf-NADH-PPase PF09297.6 gi|84489189|ref|YP_447421.1| - 0.56 9.7 2.4 5.1 6.6 0.1 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF35_N PF12172.3 gi|84489189|ref|YP_447421.1| - 1.2 9.1 6.7 3.6 7.6 0.0 2.5 3 0 0 3 3 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Radical_SAM PF04055.16 gi|84489190|ref|YP_447422.1| - 4.4e-23 82.2 0.3 1.1e-22 80.9 0.2 1.7 1 0 0 1 1 1 1 Radical SAM superfamily UPF0004 PF00919.15 gi|84489190|ref|YP_447422.1| - 6.7e-23 80.3 1.0 9.9e-23 79.8 0.1 1.8 2 0 0 2 2 2 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 gi|84489190|ref|YP_447422.1| - 1.9e-10 40.3 0.2 4.1e-10 39.2 0.1 1.6 1 0 0 1 1 1 1 TRAM domain B12-binding PF02310.14 gi|84489190|ref|YP_447422.1| - 0.0027 17.5 0.0 0.096 12.5 0.0 2.5 2 0 0 2 2 2 1 B12 binding domain Snf7 PF03357.16 gi|84489190|ref|YP_447422.1| - 8.2 5.7 8.1 0.74 9.1 0.1 2.9 2 1 1 3 3 3 0 Snf7 ADK_lid PF05191.9 gi|84489191|ref|YP_447423.1| - 0.0063 16.1 0.7 0.0063 16.1 0.5 2.5 2 1 0 2 2 2 1 Adenylate kinase, active site lid zinc_ribbon_2 PF13240.1 gi|84489191|ref|YP_447423.1| - 0.0094 15.4 1.1 0.0094 15.4 0.7 2.3 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|84489191|ref|YP_447423.1| - 0.013 15.3 6.6 0.098 12.4 4.9 2.1 1 1 0 1 1 1 0 Double zinc ribbon zf-C2HC5 PF06221.8 gi|84489191|ref|YP_447423.1| - 0.037 13.7 4.5 2.7 7.7 0.2 2.3 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-ribbon_3 PF13248.1 gi|84489191|ref|YP_447423.1| - 0.038 13.1 0.5 0.038 13.1 0.4 2.6 2 1 0 2 2 2 0 zinc-ribbon domain Spt4 PF06093.8 gi|84489191|ref|YP_447423.1| - 0.064 13.1 0.7 0.064 13.1 0.5 3.1 2 1 1 3 3 3 0 Spt4/RpoE2 zinc finger AcylCoA_DH_N PF12418.3 gi|84489191|ref|YP_447423.1| - 0.14 11.8 0.2 0.23 11.1 0.1 1.4 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase N terminal DUF2072 PF09845.4 gi|84489191|ref|YP_447423.1| - 0.2 11.6 1.3 2.6 7.9 0.1 2.1 2 0 0 2 2 2 0 Zn-ribbon containing protein (DUF2072) OrfB_Zn_ribbon PF07282.6 gi|84489191|ref|YP_447423.1| - 0.43 10.2 4.0 8.6 6.0 0.1 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|84489191|ref|YP_447423.1| - 0.58 9.6 8.8 0.36 10.3 1.2 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit HypA PF01155.14 gi|84489191|ref|YP_447423.1| - 0.79 9.4 7.0 0.45 10.2 0.7 2.2 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Herpes_UL49_1 PF03117.9 gi|84489191|ref|YP_447423.1| - 0.92 8.5 5.1 1.5 7.9 3.5 1.3 1 0 0 1 1 1 0 UL49 family eIF-5_eIF-2B PF01873.12 gi|84489191|ref|YP_447423.1| - 1 9.0 5.3 0.21 11.2 1.1 1.8 2 0 0 2 2 2 0 Domain found in IF2B/IF5 PMP22_Claudin PF00822.15 gi|84489191|ref|YP_447423.1| - 1.1 8.9 13.2 0.82 9.3 2.9 2.5 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin family zinc_ribbon_6 PF14599.1 gi|84489191|ref|YP_447423.1| - 2.5 7.9 7.5 9 6.1 1.1 3.0 3 0 0 3 3 3 0 Zinc-ribbon FUR PF01475.14 gi|84489191|ref|YP_447423.1| - 3 7.7 4.8 20 5.1 0.0 3.2 3 1 1 4 4 4 0 Ferric uptake regulator family zf-FPG_IleRS PF06827.9 gi|84489191|ref|YP_447423.1| - 3 7.5 7.1 4.9 6.8 0.0 2.8 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS NinF PF05810.7 gi|84489191|ref|YP_447423.1| - 4 7.3 5.5 6.7 6.6 0.1 2.5 2 1 0 2 2 2 0 NinF protein Spore_YtfJ PF09579.5 gi|84489192|ref|YP_447424.1| - 2.7e-17 62.3 1.1 3.3e-17 62.0 0.3 1.5 1 1 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) DUF2953 PF11167.3 gi|84489193|ref|YP_447425.1| - 2.4e-08 33.7 0.3 8.2e-08 32.0 0.2 2.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) DUF2457 PF10446.4 gi|84489193|ref|YP_447425.1| - 1.2 7.8 5.1 1.5 7.4 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Gly_rich PF12810.2 gi|84489194|ref|YP_447426.1| - 0.064 12.8 0.1 0.079 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycine rich protein CBFD_NFYB_HMF PF00808.18 gi|84489195|ref|YP_447427.1| - 9.9e-16 57.5 0.0 1.1e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84489195|ref|YP_447427.1| - 1.9e-10 40.6 0.0 2.1e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 DUF1931 PF09123.6 gi|84489195|ref|YP_447427.1| - 0.0051 16.7 0.1 0.0055 16.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1931) Radical_SAM PF04055.16 gi|84489196|ref|YP_447428.1| - 1e-20 74.5 0.0 1e-20 74.5 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|84489196|ref|YP_447428.1| - 3.5e-09 36.8 0.8 7.8e-09 35.7 0.0 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|84489196|ref|YP_447428.1| - 4.7e-08 33.0 0.0 4.7e-08 33.0 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S single cluster domain GOLD_2 PF13897.1 gi|84489196|ref|YP_447428.1| - 0.0024 18.0 0.0 0.0045 17.2 0.0 1.4 1 0 0 1 1 1 1 Golgi-dynamics membrane-trafficking UPF0167 PF03691.9 gi|84489196|ref|YP_447428.1| - 0.017 14.5 1.2 0.085 12.2 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0167) DUF46 PF01864.12 gi|84489197|ref|YP_447429.1| - 1.1e-59 201.2 13.6 1.7e-59 200.6 9.4 1.2 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|84489197|ref|YP_447429.1| - 0.0098 15.5 9.6 0.0098 15.5 6.6 2.3 1 1 1 2 2 2 1 Cytidylyltransferase family Ycf4 PF02392.11 gi|84489197|ref|YP_447429.1| - 0.23 10.7 2.1 0.55 9.5 1.4 1.7 1 0 0 1 1 1 0 Ycf4 Gly-zipper_YMGG PF13441.1 gi|84489197|ref|YP_447429.1| - 0.47 9.9 6.0 7.7 6.1 0.1 2.4 2 0 0 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.1 gi|84489197|ref|YP_447429.1| - 0.73 9.5 7.7 6.3 6.5 2.3 2.5 2 0 0 2 2 2 0 Glycine zipper Rick_17kDa_Anti PF05433.10 gi|84489197|ref|YP_447429.1| - 4.8 6.9 8.7 17 5.2 3.2 2.6 2 0 0 2 2 2 0 Glycine zipper 2TM domain Hydantoinase_A PF01968.13 gi|84489198|ref|YP_447430.1| - 1.2e-11 44.2 3.0 4.3e-07 29.3 0.1 3.1 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase MutL PF13941.1 gi|84489198|ref|YP_447430.1| - 1.2e-05 23.8 0.2 0.0016 16.8 0.1 2.2 2 0 0 2 2 2 2 MutL protein Hydant_A_N PF05378.8 gi|84489198|ref|YP_447430.1| - 0.00074 19.0 1.8 0.18 11.3 0.0 2.9 3 1 0 3 3 3 2 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.1 gi|84489198|ref|YP_447430.1| - 0.0062 16.3 5.5 0.18 11.6 0.1 3.4 3 1 0 3 3 3 2 Cell division protein FtsA Pox_A22 PF04848.8 gi|84489198|ref|YP_447430.1| - 0.22 11.3 3.5 0.14 12.0 0.2 2.3 2 1 1 3 3 3 0 Poxvirus A22 protein DUF768 PF05589.6 gi|84489198|ref|YP_447430.1| - 0.25 11.3 1.4 0.89 9.5 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF768) ATP-grasp_3 PF02655.9 gi|84489199|ref|YP_447431.1| - 1.3e-33 116.1 1.0 1.8e-33 115.7 0.7 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|84489199|ref|YP_447431.1| - 9.9e-17 61.2 0.0 1.4e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|84489199|ref|YP_447431.1| - 1.6e-06 27.1 0.0 2.6e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|84489199|ref|YP_447431.1| - 3.7e-06 26.4 1.4 8.8e-06 25.2 1.0 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH-S_ATP PF02955.11 gi|84489199|ref|YP_447431.1| - 0.00028 20.0 1.0 0.00057 19.0 0.7 1.5 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain RimK PF08443.6 gi|84489199|ref|YP_447431.1| - 0.013 15.0 7.0 0.026 13.9 4.8 1.5 1 1 0 1 1 1 0 RimK-like ATP-grasp domain LAGLIDADG_1 PF00961.14 gi|84489199|ref|YP_447431.1| - 7.3 7.2 10.4 0.17 12.4 1.7 2.3 2 0 0 2 2 2 0 LAGLIDADG endonuclease PseudoU_synth_1 PF01416.15 gi|84489200|ref|YP_447432.1| - 7.2e-37 126.0 0.0 1.9e-19 70.0 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase His_biosynth PF00977.16 gi|84489201|ref|YP_447433.1| - 6.7e-81 270.9 2.2 7.6e-81 270.7 1.5 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|84489201|ref|YP_447433.1| - 2.9e-11 42.7 0.0 0.00014 20.7 0.0 2.2 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|84489201|ref|YP_447433.1| - 1.8e-09 37.2 2.1 6.9e-05 22.2 0.2 2.2 2 0 0 2 2 2 2 PcrB family ThiG PF05690.9 gi|84489201|ref|YP_447433.1| - 4.2e-09 35.8 0.6 7.8e-05 21.8 0.1 2.1 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG DHO_dh PF01180.16 gi|84489201|ref|YP_447433.1| - 4e-07 29.2 1.3 0.0025 16.8 0.0 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase NanE PF04131.9 gi|84489201|ref|YP_447433.1| - 2.8e-06 26.4 0.1 0.047 12.6 0.0 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.13 gi|84489201|ref|YP_447433.1| - 1.6e-05 23.8 0.1 0.02 13.7 0.0 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase Trp_syntA PF00290.15 gi|84489201|ref|YP_447433.1| - 5.4e-05 21.8 0.2 0.011 14.3 0.1 2.2 2 0 0 2 2 2 2 Tryptophan synthase alpha chain TMP-TENI PF02581.12 gi|84489201|ref|YP_447433.1| - 0.0001 21.4 0.3 0.053 12.6 0.0 2.4 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI IGPS PF00218.16 gi|84489201|ref|YP_447433.1| - 0.00014 21.0 0.6 0.89 8.5 0.0 3.1 2 1 1 3 3 3 2 Indole-3-glycerol phosphate synthase IMPDH PF00478.20 gi|84489201|ref|YP_447433.1| - 0.00094 18.1 0.3 0.18 10.6 0.0 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.10 gi|84489201|ref|YP_447433.1| - 0.0012 18.1 0.0 0.58 9.2 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase SOR_SNZ PF01680.12 gi|84489201|ref|YP_447433.1| - 0.0022 17.6 0.3 0.068 12.7 0.0 2.6 2 1 1 3 3 3 1 SOR/SNZ family B12-binding PF02310.14 gi|84489201|ref|YP_447433.1| - 0.0023 17.7 0.0 0.096 12.5 0.0 2.3 2 0 0 2 2 2 1 B12 binding domain Ribul_P_3_epim PF00834.14 gi|84489201|ref|YP_447433.1| - 0.004 16.2 0.2 1.9 7.5 0.0 2.5 2 0 0 2 2 2 2 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.14 gi|84489201|ref|YP_447433.1| - 0.01 15.3 0.7 0.67 9.4 0.0 2.1 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain PEP_mutase PF13714.1 gi|84489201|ref|YP_447433.1| - 0.012 14.8 0.0 1.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase G3P_antiterm PF04309.7 gi|84489201|ref|YP_447433.1| - 0.024 13.6 1.0 1.8 7.5 0.1 2.3 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator KH_3 PF13014.1 gi|84489201|ref|YP_447433.1| - 0.14 11.8 1.0 8.3 6.1 0.1 2.5 2 0 0 2 2 2 0 KH domain CTP_transf_2 PF01467.21 gi|84489202|ref|YP_447434.1| - 8.9e-16 58.3 0.1 1.6e-15 57.5 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|84489202|ref|YP_447434.1| - 0.036 13.7 0.1 0.093 12.3 0.1 1.8 1 1 1 2 2 2 0 FAD synthetase DUF1943 PF09172.6 gi|84489203|ref|YP_447435.1| - 0.033 13.0 0.1 0.04 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Radical_SAM PF04055.16 gi|84489204|ref|YP_447436.1| - 4.3e-13 49.7 0.4 1.3e-12 48.1 0.3 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|84489204|ref|YP_447436.1| - 0.11 12.5 0.7 0.27 11.2 0.5 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain ABC_tran PF00005.22 gi|84489205|ref|YP_447437.1| - 1.2e-55 187.5 0.0 4e-27 95.1 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|84489205|ref|YP_447437.1| - 2.8e-13 50.4 3.0 0.0061 16.5 0.0 4.2 3 1 1 4 4 4 4 AAA domain SMC_N PF02463.14 gi|84489205|ref|YP_447437.1| - 2e-08 33.7 3.9 0.0029 16.8 0.1 4.0 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|84489205|ref|YP_447437.1| - 1.8e-06 27.2 0.2 0.016 14.3 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 SbcCD_C PF13558.1 gi|84489205|ref|YP_447437.1| - 2.1e-05 24.3 0.1 0.12 12.2 0.0 3.8 3 2 0 3 3 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.1 gi|84489205|ref|YP_447437.1| - 2.3e-05 23.8 0.6 0.15 11.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|84489205|ref|YP_447437.1| - 8e-05 22.6 2.7 0.24 11.3 0.3 3.1 2 2 0 2 2 2 2 AAA ATPase domain AAA_17 PF13207.1 gi|84489205|ref|YP_447437.1| - 0.0001 23.1 2.8 0.048 14.4 0.0 3.6 4 1 0 4 4 3 1 AAA domain AAA_22 PF13401.1 gi|84489205|ref|YP_447437.1| - 0.00032 20.8 0.2 1.4 9.1 0.0 3.2 4 0 0 4 4 3 2 AAA domain AAA_25 PF13481.1 gi|84489205|ref|YP_447437.1| - 0.0005 19.5 0.1 0.39 10.0 0.0 2.6 3 0 0 3 3 3 2 AAA domain AAA_15 PF13175.1 gi|84489205|ref|YP_447437.1| - 0.00073 18.6 13.0 0.063 12.3 0.0 4.1 3 1 0 4 4 4 2 AAA ATPase domain AAA_30 PF13604.1 gi|84489205|ref|YP_447437.1| - 0.00094 18.8 0.0 0.24 10.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.18 gi|84489205|ref|YP_447437.1| - 0.0012 18.8 0.2 0.21 11.5 0.0 3.3 3 1 0 3 3 3 1 50S ribosome-binding GTPase AAA_18 PF13238.1 gi|84489205|ref|YP_447437.1| - 0.0015 18.8 0.8 0.7 10.2 0.0 3.7 4 0 0 4 4 4 1 AAA domain AAA_10 PF12846.2 gi|84489205|ref|YP_447437.1| - 0.0055 16.1 5.1 0.48 9.8 0.3 2.7 3 0 0 3 3 3 2 AAA-like domain AAA_33 PF13671.1 gi|84489205|ref|YP_447437.1| - 0.0059 16.4 2.5 0.31 10.9 0.1 3.1 2 1 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|84489205|ref|YP_447437.1| - 0.0076 15.1 2.7 1.4 7.7 0.0 2.7 3 0 0 3 3 3 2 NB-ARC domain MobB PF03205.9 gi|84489205|ref|YP_447437.1| - 0.016 14.9 0.1 2 8.0 0.1 2.8 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B GCD14 PF08704.5 gi|84489205|ref|YP_447437.1| - 0.029 13.8 0.2 0.12 11.8 0.0 1.9 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit ATP-synt_ab PF00006.20 gi|84489205|ref|YP_447437.1| - 0.035 13.5 0.2 5 6.5 0.1 2.5 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_19 PF13245.1 gi|84489205|ref|YP_447437.1| - 0.037 13.7 0.0 2.7 7.8 0.0 2.4 2 0 0 2 2 2 0 Part of AAA domain UPF0079 PF02367.12 gi|84489205|ref|YP_447437.1| - 0.058 13.0 0.1 2.9 7.5 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 NACHT PF05729.7 gi|84489205|ref|YP_447437.1| - 0.063 12.9 1.1 6.1 6.4 0.1 2.6 2 0 0 2 2 2 0 NACHT domain FtsK_SpoIIIE PF01580.13 gi|84489205|ref|YP_447437.1| - 0.1 12.0 0.2 1.3 8.4 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family Pox_A32 PF04665.7 gi|84489205|ref|YP_447437.1| - 0.2 10.9 3.7 9 5.5 0.1 3.2 3 0 0 3 3 3 0 Poxvirus A32 protein cobW PF02492.14 gi|84489205|ref|YP_447437.1| - 0.24 10.8 2.1 23 4.3 0.1 3.2 4 0 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.1 gi|84489205|ref|YP_447437.1| - 1.7 8.8 6.5 15 5.8 0.1 2.9 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.12 gi|84489205|ref|YP_447437.1| - 4.3 7.0 8.0 3.1 7.5 0.1 3.3 3 1 0 3 3 3 0 Domain of unknown function DUF87 HrcA_DNA-bdg PF03444.10 gi|84489206|ref|YP_447438.1| - 1.4e-37 126.9 0.1 3.1e-37 125.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.23 gi|84489206|ref|YP_447438.1| - 1.6e-20 72.6 0.5 9.9e-10 38.0 0.0 2.4 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.15 gi|84489206|ref|YP_447438.1| - 9.8e-07 28.8 0.0 2.2e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.7 gi|84489206|ref|YP_447438.1| - 6.6e-05 22.4 0.0 0.00022 20.7 0.0 2.0 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.2 gi|84489206|ref|YP_447438.1| - 0.0029 17.3 0.0 0.0053 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_terminase PF10668.4 gi|84489206|ref|YP_447438.1| - 0.092 12.5 0.1 5.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Phage terminase small subunit TrmB PF01978.14 gi|84489206|ref|YP_447438.1| - 0.12 12.1 0.0 0.28 10.9 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_38 PF13936.1 gi|84489206|ref|YP_447438.1| - 0.12 11.9 0.1 0.31 10.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DS PF01916.12 gi|84489207|ref|YP_447439.1| - 1.7e-90 303.1 0.0 2.1e-90 302.9 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase DUF4010 PF13194.1 gi|84489208|ref|YP_447440.1| - 0.0021 17.4 1.2 0.003 16.8 0.1 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4010) DUF4064 PF13273.1 gi|84489208|ref|YP_447440.1| - 0.18 11.9 13.8 0.38 10.8 0.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF4064) DUF204 PF02659.10 gi|84489208|ref|YP_447440.1| - 0.79 9.8 9.2 0.3 11.2 2.8 2.8 2 1 0 2 2 2 0 Domain of unknown function DUF Synaptobrevin PF00957.16 gi|84489208|ref|YP_447440.1| - 6.4 6.4 6.0 16 5.1 0.0 3.1 3 0 0 3 3 3 0 Synaptobrevin OMPdecase PF00215.19 gi|84489209|ref|YP_447441.1| - 1.1e-36 126.3 0.5 1.5e-36 125.9 0.3 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family DHDPS PF00701.17 gi|84489209|ref|YP_447441.1| - 0.0051 15.4 0.0 0.0089 14.6 0.0 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family B12-binding PF02310.14 gi|84489209|ref|YP_447441.1| - 0.085 12.7 0.0 0.23 11.3 0.0 1.7 2 0 0 2 2 2 0 B12 binding domain CbiM PF01891.11 gi|84489210|ref|YP_447442.1| - 4e-56 189.8 15.5 4.6e-56 189.6 10.8 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region DUF1212 PF06738.7 gi|84489210|ref|YP_447442.1| - 3.5 7.0 8.8 3.2 7.1 5.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1212) CbiN PF02553.10 gi|84489211|ref|YP_447443.1| - 4.5e-27 93.8 0.0 5.5e-27 93.5 0.0 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN ABC2_membrane_4 PF12730.2 gi|84489211|ref|YP_447443.1| - 1.2 8.2 3.8 30 3.6 3.1 1.9 1 1 0 1 1 1 0 ABC-2 family transporter protein CbiQ PF02361.11 gi|84489212|ref|YP_447444.1| - 7.9e-37 126.9 12.8 7.9e-37 126.9 8.9 1.3 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.22 gi|84489213|ref|YP_447445.1| - 1.4e-33 116.0 0.0 4.2e-33 114.5 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|84489213|ref|YP_447445.1| - 2.4e-15 57.2 0.1 1.2e-12 48.4 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|84489213|ref|YP_447445.1| - 3.3e-07 29.7 0.0 6.9e-06 25.4 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|84489213|ref|YP_447445.1| - 2.5e-06 26.7 0.1 0.0045 16.0 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_13 PF13166.1 gi|84489213|ref|YP_447445.1| - 0.00075 18.0 0.1 0.059 11.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|84489213|ref|YP_447445.1| - 0.00088 18.7 0.1 0.0024 17.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|84489213|ref|YP_447445.1| - 0.0076 16.1 0.0 0.045 13.6 0.0 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.1 gi|84489213|ref|YP_447445.1| - 0.026 14.8 0.4 0.055 13.7 0.3 1.5 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|84489213|ref|YP_447445.1| - 0.027 13.6 0.0 0.041 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 PmbA_TldD PF01523.11 gi|84489214|ref|YP_447446.1| - 1.3e-76 257.6 1.3 1.7e-76 257.3 0.9 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase AMMECR1 PF01871.12 gi|84489215|ref|YP_447447.1| - 3.8e-59 198.6 0.0 4.3e-59 198.4 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 MMR_HSR1 PF01926.18 gi|84489216|ref|YP_447448.1| - 1.4e-19 70.1 0.0 2.8e-19 69.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.9 gi|84489216|ref|YP_447448.1| - 3.4e-18 65.2 0.2 7.8e-18 64.1 0.1 1.6 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.13 gi|84489216|ref|YP_447448.1| - 1.4e-15 56.9 0.2 2e-15 56.3 0.1 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B AIG1 PF04548.11 gi|84489216|ref|YP_447448.1| - 1.8e-05 23.9 0.0 3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 AIG1 family DUF258 PF03193.11 gi|84489216|ref|YP_447448.1| - 0.0027 16.9 0.0 0.04 13.1 0.0 2.4 1 1 0 1 1 1 1 Protein of unknown function, DUF258 cobW PF02492.14 gi|84489216|ref|YP_447448.1| - 0.0032 16.9 0.0 0.92 8.9 0.0 2.3 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.18 gi|84489216|ref|YP_447448.1| - 0.0067 16.2 0.2 2.4 7.9 0.0 2.6 1 1 1 2 2 2 2 Dynamin family Miro PF08477.8 gi|84489216|ref|YP_447448.1| - 0.01 16.3 0.0 0.025 15.0 0.0 1.8 1 1 1 2 2 2 0 Miro-like protein Arf PF00025.16 gi|84489216|ref|YP_447448.1| - 0.01 15.0 0.1 0.098 11.8 0.0 2.2 1 1 0 1 1 1 0 ADP-ribosylation factor family GTP_EFTU PF00009.22 gi|84489216|ref|YP_447448.1| - 0.015 14.7 0.2 2.9 7.2 0.2 2.9 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_18 PF13238.1 gi|84489216|ref|YP_447448.1| - 0.025 14.8 0.0 0.063 13.5 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|84489216|ref|YP_447448.1| - 0.061 14.1 0.0 0.2 12.5 0.0 2.1 2 1 0 2 2 2 0 AAA domain Ras PF00071.17 gi|84489216|ref|YP_447448.1| - 0.11 11.9 0.1 0.55 9.5 0.1 2.0 1 1 0 1 1 1 0 Ras family ArgK PF03308.11 gi|84489216|ref|YP_447448.1| - 0.14 10.9 0.0 0.32 9.7 0.0 1.5 2 0 0 2 2 2 0 ArgK protein HSP20 PF00011.16 gi|84489217|ref|YP_447449.1| - 3.5e-11 42.8 0.4 3.5e-11 42.8 0.2 1.9 2 0 0 2 2 2 1 Hsp20/alpha crystallin family PRESAN PF09687.5 gi|84489217|ref|YP_447449.1| - 0.3 11.1 7.6 0.033 14.2 1.9 1.7 1 1 1 2 2 2 0 Plasmodium RESA N-terminal CS PF04969.11 gi|84489217|ref|YP_447449.1| - 0.74 10.4 4.9 9.4 6.8 0.0 3.2 3 0 0 3 3 3 0 CS domain 3H PF02829.9 gi|84489218|ref|YP_447450.1| - 3e-24 84.8 4.1 3e-24 84.8 1.2 2.1 2 0 0 2 2 2 1 3H domain AAA_17 PF13207.1 gi|84489218|ref|YP_447450.1| - 2.5e-10 41.2 1.1 9.8e-10 39.3 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489218|ref|YP_447450.1| - 5.5e-07 29.9 2.9 2e-06 28.1 0.1 2.5 1 1 1 3 3 3 1 AAA domain AAA_33 PF13671.1 gi|84489218|ref|YP_447450.1| - 0.00065 19.5 0.0 0.0058 16.5 0.0 2.2 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 gi|84489218|ref|YP_447450.1| - 0.0023 17.8 1.6 0.0057 16.5 0.5 2.1 2 1 1 3 3 3 1 Cytidylate kinase-like family AAA_22 PF13401.1 gi|84489218|ref|YP_447450.1| - 0.029 14.5 0.3 0.11 12.6 0.0 2.4 2 1 1 3 3 3 0 AAA domain AAA PF00004.24 gi|84489218|ref|YP_447450.1| - 0.038 14.1 0.3 0.18 11.9 0.0 2.2 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) SKI PF01202.17 gi|84489218|ref|YP_447450.1| - 0.12 12.2 0.4 0.66 9.8 0.0 2.4 2 1 0 2 2 2 0 Shikimate kinase AAA_16 PF13191.1 gi|84489218|ref|YP_447450.1| - 0.18 11.7 0.2 0.39 10.6 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain zf-ZPR1 PF03367.8 gi|84489219|ref|YP_447451.1| - 3.3e-43 146.6 0.1 4e-43 146.3 0.1 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Lar_restr_allev PF14354.1 gi|84489219|ref|YP_447451.1| - 0.00021 21.5 0.1 0.00039 20.6 0.1 1.4 1 0 0 1 1 1 1 Restriction alleviation protein Lar Elf1 PF05129.8 gi|84489219|ref|YP_447451.1| - 0.012 15.2 0.2 0.03 14.0 0.1 1.7 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Prim_Zn_Ribbon PF08273.7 gi|84489219|ref|YP_447451.1| - 0.028 14.4 0.3 0.056 13.5 0.2 1.5 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase OrfB_Zn_ribbon PF07282.6 gi|84489219|ref|YP_447451.1| - 0.057 13.0 1.4 0.47 10.1 0.1 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.2 gi|84489219|ref|YP_447451.1| - 0.13 12.1 0.2 0.3 10.9 0.2 1.6 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF2072 PF09845.4 gi|84489219|ref|YP_447451.1| - 0.23 11.3 1.3 1.2 9.0 0.9 2.3 1 1 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) zinc_ribbon_2 PF13240.1 gi|84489219|ref|YP_447451.1| - 0.27 10.7 2.1 3.2 7.3 0.0 2.7 3 0 0 3 3 3 0 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|84489219|ref|YP_447451.1| - 0.29 10.9 1.9 10 6.0 0.1 2.3 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like TF_Zn_Ribbon PF08271.7 gi|84489219|ref|YP_447451.1| - 0.54 9.6 4.7 0.49 9.7 1.3 2.3 2 1 0 2 2 2 0 TFIIB zinc-binding Nitroreductase PF00881.19 gi|84489220|ref|YP_447452.1| - 1.5e-33 115.9 0.0 2e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family CBFD_NFYB_HMF PF00808.18 gi|84489221|ref|YP_447453.1| - 0.014 15.4 0.4 0.042 13.8 0.0 1.9 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84489221|ref|YP_447453.1| - 0.079 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 THP2 PF09432.5 gi|84489221|ref|YP_447453.1| - 0.81 9.5 7.5 2 8.3 2.2 2.1 1 1 1 2 2 2 0 Tho complex subunit THP2 QRPTase_C PF01729.14 gi|84489222|ref|YP_447454.1| - 6.8e-60 201.4 1.8 8.6e-60 201.1 1.3 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|84489222|ref|YP_447454.1| - 1.3e-25 89.0 0.0 2.2e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.14 gi|84489222|ref|YP_447454.1| - 0.034 13.2 0.1 0.09 11.8 0.0 1.7 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family Lactamase_B_2 PF12706.2 gi|84489223|ref|YP_447455.1| - 1.5e-29 102.9 0.2 2.1e-29 102.4 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|84489223|ref|YP_447455.1| - 3.7e-14 52.8 2.1 1.2e-11 44.6 0.2 2.8 2 1 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|84489223|ref|YP_447455.1| - 0.0012 18.2 0.0 0.0024 17.3 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease PDEase_II PF02112.10 gi|84489223|ref|YP_447455.1| - 0.036 12.9 0.1 0.071 12.0 0.1 1.4 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II Stomoxyn PF11585.3 gi|84489223|ref|YP_447455.1| - 2.6 7.9 7.0 5.6 6.8 1.7 2.6 3 0 0 3 3 3 0 Insect antimicrobial peptide, stomoxyn SHOCT PF09851.4 gi|84489224|ref|YP_447456.1| - 2e-09 36.5 0.8 3.9e-09 35.6 0.5 1.5 1 0 0 1 1 1 1 Short C-terminal domain bPH_3 PF14470.1 gi|84489224|ref|YP_447456.1| - 0.0048 17.1 0.1 0.0091 16.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial PH domain Rep_fac_C PF08542.6 gi|84489225|ref|YP_447457.1| - 1.6e-19 69.6 0.1 4.3e-19 68.2 0.1 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.1 gi|84489225|ref|YP_447457.1| - 1.5e-16 60.4 1.5 2.3e-14 53.3 0.1 2.9 2 1 0 2 2 2 1 DNA polymerase III, delta subunit AAA PF00004.24 gi|84489225|ref|YP_447457.1| - 3.2e-16 59.7 0.3 1.1e-15 58.0 0.0 1.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|84489225|ref|YP_447457.1| - 6.4e-12 44.9 1.2 5.5e-05 22.0 0.0 2.3 1 1 1 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_14 PF13173.1 gi|84489225|ref|YP_447457.1| - 6.8e-08 32.4 0.0 1.6e-07 31.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|84489225|ref|YP_447457.1| - 1.2e-06 27.8 0.2 5.4e-06 25.6 0.1 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus DNA_pol3_delta PF06144.8 gi|84489225|ref|YP_447457.1| - 3.3e-06 26.7 0.1 5.9e-06 25.8 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_22 PF13401.1 gi|84489225|ref|YP_447457.1| - 2.6e-05 24.3 0.3 0.0022 18.1 0.1 2.8 2 1 1 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|84489225|ref|YP_447457.1| - 4.9e-05 23.3 0.1 0.004 17.1 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain Mg_chelatase PF01078.16 gi|84489225|ref|YP_447457.1| - 9.5e-05 21.6 0.0 0.075 12.1 0.0 2.4 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_18 PF13238.1 gi|84489225|ref|YP_447457.1| - 9.9e-05 22.6 0.2 0.0013 19.0 0.0 2.5 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|84489225|ref|YP_447457.1| - 0.00072 19.0 0.0 0.0021 17.5 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein Sigma54_activat PF00158.21 gi|84489225|ref|YP_447457.1| - 0.0011 18.5 0.0 1.3 8.4 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain TIP49 PF06068.8 gi|84489225|ref|YP_447457.1| - 0.0013 17.4 0.2 0.056 12.1 0.0 2.4 1 1 1 2 2 2 1 TIP49 C-terminus AAA_17 PF13207.1 gi|84489225|ref|YP_447457.1| - 0.0015 19.3 0.0 0.0037 18.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.9 gi|84489225|ref|YP_447457.1| - 0.0028 17.3 0.1 0.018 14.7 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|84489225|ref|YP_447457.1| - 0.0031 17.1 0.0 0.0075 15.8 0.0 1.6 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|84489225|ref|YP_447457.1| - 0.0033 17.3 0.1 0.02 14.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) MobB PF03205.9 gi|84489225|ref|YP_447457.1| - 0.009 15.7 0.0 0.18 11.4 0.0 2.6 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Viral_helicase1 PF01443.13 gi|84489225|ref|YP_447457.1| - 0.013 14.9 0.0 0.034 13.6 0.0 1.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.1 gi|84489225|ref|YP_447457.1| - 0.019 14.5 0.0 0.051 13.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.10 gi|84489225|ref|YP_447457.1| - 0.021 13.9 0.0 0.045 12.7 0.0 1.6 1 0 0 1 1 1 0 Anion-transporting ATPase Sigma54_activ_2 PF14532.1 gi|84489225|ref|YP_447457.1| - 0.03 14.3 0.0 0.1 12.6 0.0 1.9 1 1 0 1 1 1 0 Sigma-54 interaction domain DUF3400 PF11880.3 gi|84489225|ref|YP_447457.1| - 0.031 13.5 0.0 0.072 12.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3400) DUF815 PF05673.8 gi|84489225|ref|YP_447457.1| - 0.033 13.1 0.0 0.057 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2877 PF11392.3 gi|84489225|ref|YP_447457.1| - 0.035 14.3 0.1 5.3 7.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2877) PhoH PF02562.11 gi|84489225|ref|YP_447457.1| - 0.04 13.1 0.1 1.1 8.4 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein DSBA PF01323.15 gi|84489225|ref|YP_447457.1| - 0.046 13.2 0.0 5 6.6 0.0 2.2 2 0 0 2 2 2 0 DSBA-like thioredoxin domain ResIII PF04851.10 gi|84489225|ref|YP_447457.1| - 0.052 13.3 0.1 0.11 12.2 0.0 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_25 PF13481.1 gi|84489225|ref|YP_447457.1| - 0.076 12.4 0.9 0.2 11.0 0.2 2.2 1 1 0 2 2 2 0 AAA domain DUF258 PF03193.11 gi|84489225|ref|YP_447457.1| - 0.076 12.1 0.0 0.33 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF258 FtsK_SpoIIIE PF01580.13 gi|84489225|ref|YP_447457.1| - 0.08 12.4 0.0 0.26 10.7 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family APS_kinase PF01583.15 gi|84489225|ref|YP_447457.1| - 0.082 12.5 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase SRP54 PF00448.17 gi|84489225|ref|YP_447457.1| - 0.096 12.1 1.5 0.13 11.7 0.2 1.9 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain RNA_helicase PF00910.17 gi|84489225|ref|YP_447457.1| - 0.097 12.8 0.1 0.34 11.1 0.0 2.0 2 0 0 2 2 1 0 RNA helicase AAA PF00004.24 gi|84489226|ref|YP_447458.1| - 4.8e-11 42.9 0.0 1.4e-10 41.4 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|84489226|ref|YP_447458.1| - 1.2e-06 27.7 0.0 2.7e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 gi|84489226|ref|YP_447458.1| - 5.4e-06 26.3 0.9 1.6e-05 24.8 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|84489226|ref|YP_447458.1| - 0.00078 19.5 0.1 0.016 15.3 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|84489226|ref|YP_447458.1| - 0.0039 17.9 2.3 0.02 15.7 0.1 2.9 2 1 0 2 2 2 1 AAA domain Mg_chelatase PF01078.16 gi|84489226|ref|YP_447458.1| - 0.0071 15.5 0.0 0.016 14.3 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|84489226|ref|YP_447458.1| - 0.0088 15.7 0.0 0.038 13.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|84489226|ref|YP_447458.1| - 0.0098 15.6 0.0 0.021 14.5 0.0 1.5 1 0 0 1 1 1 1 Part of AAA domain IstB_IS21 PF01695.12 gi|84489226|ref|YP_447458.1| - 0.012 15.0 1.4 0.037 13.4 0.0 2.4 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_16 PF13191.1 gi|84489226|ref|YP_447458.1| - 0.057 13.3 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain YopE PF03545.8 gi|84489226|ref|YP_447458.1| - 0.13 12.2 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) AAA_18 PF13238.1 gi|84489226|ref|YP_447458.1| - 0.21 11.9 0.0 0.21 11.9 0.0 3.4 3 1 0 3 3 3 0 AAA domain DUF1675 PF07897.6 gi|84489226|ref|YP_447458.1| - 8.7 6.1 24.5 18 5.0 17.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1675) Arginase PF00491.16 gi|84489227|ref|YP_447459.1| - 2.2e-69 233.8 0.2 2.5e-69 233.6 0.1 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.2 gi|84489227|ref|YP_447459.1| - 0.072 13.2 2.8 0.15 12.2 1.8 1.7 1 1 0 1 1 1 0 UPF0489 domain ALAD PF00490.16 gi|84489228|ref|YP_447460.1| - 5.4e-138 459.3 1.2 6.5e-138 459.0 0.8 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Phosphodiest PF01663.17 gi|84489228|ref|YP_447460.1| - 0.11 11.7 0.0 0.16 11.2 0.0 1.4 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Cas_Cas6 PF01881.11 gi|84489230|ref|YP_447462.1| - 1.2e-19 71.0 9.8 1.2e-19 71.0 6.8 1.8 1 1 1 2 2 2 1 CRISPR associated protein Cas6 DUF3078 PF11276.3 gi|84489230|ref|YP_447462.1| - 0.0075 16.4 1.9 0.014 15.5 1.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3078) Cas_TM1802 PF09484.5 gi|84489231|ref|YP_447463.1| - 9.8e-163 542.8 58.3 1.1e-162 542.6 40.4 1.0 1 0 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) Cas_CXXC_CXXC PF09706.5 gi|84489231|ref|YP_447463.1| - 0.86 9.8 3.5 1.7 8.8 0.1 3.0 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_CXXC_CXXC) DUF694 PF05107.7 gi|84489232|ref|YP_447464.1| - 1.3e-74 250.8 0.2 1.5e-74 250.6 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF694) Cas_Cas5d PF09704.5 gi|84489233|ref|YP_447465.1| - 1.9e-10 40.7 0.0 2.5e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DEAD PF00270.24 gi|84489234|ref|YP_447466.1| - 3.2e-09 36.4 1.1 8.2e-08 31.9 0.1 3.2 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|84489234|ref|YP_447466.1| - 2.8e-08 33.7 1.5 2.8e-08 33.7 1.0 2.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|84489234|ref|YP_447466.1| - 4.1e-06 26.5 0.1 1.3e-05 24.9 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PhoH PF02562.11 gi|84489234|ref|YP_447466.1| - 2e-05 23.9 0.0 0.06 12.5 0.0 2.7 2 0 0 2 2 2 2 PhoH-like protein HD PF01966.17 gi|84489234|ref|YP_447466.1| - 6.2e-05 23.0 0.1 0.00051 20.0 0.0 2.5 2 0 0 2 2 2 1 HD domain AAA_22 PF13401.1 gi|84489234|ref|YP_447466.1| - 7.2e-05 22.9 0.0 0.0017 18.5 0.0 2.9 1 1 0 1 1 1 1 AAA domain SNF2_N PF00176.18 gi|84489234|ref|YP_447466.1| - 0.00014 20.7 0.1 0.00014 20.7 0.1 2.1 3 0 0 3 3 3 1 SNF2 family N-terminal domain Cas_Cas4 PF01930.12 gi|84489235|ref|YP_447467.1| - 9.1e-54 181.7 6.3 1e-53 181.5 4.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|84489235|ref|YP_447467.1| - 2.5e-06 27.0 0.8 3.7e-06 26.5 0.4 1.4 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily HSDR_N_2 PF13588.1 gi|84489235|ref|YP_447467.1| - 0.01 15.5 2.6 0.012 15.3 1.4 1.5 1 1 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Cas_Cas1 PF01867.11 gi|84489236|ref|YP_447468.1| - 8.9e-80 267.7 1.7 1e-79 267.5 1.2 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.4 gi|84489237|ref|YP_447469.1| - 1.2e-23 83.0 1.7 1.4e-23 82.8 1.2 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas2 DNA_pol_B_exo2 PF10108.4 gi|84489237|ref|YP_447469.1| - 0.0016 18.0 0.2 0.0016 17.9 0.1 1.1 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB Ribosomal_L23 PF00276.15 gi|84489237|ref|YP_447469.1| - 0.068 13.1 0.8 0.16 11.9 0.6 1.6 1 1 0 1 1 1 0 Ribosomal protein L23 Hormone_1 PF00103.15 gi|84489237|ref|YP_447469.1| - 0.096 12.0 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Somatotropin hormone family Pik1 PF11522.3 gi|84489238|ref|YP_447470.1| - 0.0007 19.2 0.1 31 4.4 0.0 4.0 4 0 0 4 4 4 4 Yeast phosphatidylinositol-4-OH kinase Pik1 MULE PF10551.4 gi|84489239|ref|YP_447471.1| - 0.0022 18.1 0.1 0.0036 17.4 0.1 1.5 1 0 0 1 1 1 1 MULE transposase domain zf-primase PF09329.6 gi|84489239|ref|YP_447471.1| - 0.0083 15.7 1.2 0.011 15.3 0.1 1.7 2 0 0 2 2 2 1 Primase zinc finger RNA_pol_Rpb1_5 PF04998.12 gi|84489239|ref|YP_447471.1| - 2.6 7.2 7.8 3.1 6.9 5.4 1.2 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 5 CitG PF01874.11 gi|84489240|ref|YP_447472.1| - 9.9e-72 241.4 0.0 1.1e-71 241.2 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase tRNA-synt_2d PF01409.15 gi|84489241|ref|YP_447473.1| - 1.1e-96 322.8 0.0 1.6e-96 322.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|84489241|ref|YP_447473.1| - 6.2e-05 22.6 0.1 0.00028 20.4 0.0 2.1 3 0 0 3 3 3 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.15 gi|84489241|ref|YP_447473.1| - 0.00034 19.4 4.2 0.04 12.6 0.0 3.0 4 0 0 4 4 4 2 tRNA synthetases class II (D, K and N) HTH_24 PF13412.1 gi|84489241|ref|YP_447473.1| - 0.0052 16.1 0.0 0.044 13.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TetR_N PF00440.18 gi|84489241|ref|YP_447473.1| - 0.035 13.7 0.0 0.08 12.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family TFIIE_alpha PF02002.12 gi|84489241|ref|YP_447473.1| - 0.066 12.7 0.4 0.42 10.1 0.1 2.3 2 0 0 2 2 2 0 TFIIE alpha subunit TrmB PF01978.14 gi|84489241|ref|YP_447473.1| - 0.081 12.6 0.1 1.7 8.4 0.1 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF556 PF04476.8 gi|84489242|ref|YP_447474.1| - 5.7e-104 346.4 1.4 6.4e-104 346.3 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF556) QRPTase_C PF01729.14 gi|84489242|ref|YP_447474.1| - 0.00045 19.7 0.2 0.11 11.9 0.0 2.7 2 1 0 2 2 2 2 Quinolinate phosphoribosyl transferase, C-terminal domain DUF1327 PF07041.6 gi|84489242|ref|YP_447474.1| - 0.13 12.1 0.2 0.54 10.1 0.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1327) IMPDH PF00478.20 gi|84489243|ref|YP_447475.1| - 3.5e-132 440.5 7.6 4e-132 440.3 5.3 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 gi|84489243|ref|YP_447475.1| - 2e-27 94.6 6.3 2.4e-14 52.8 0.2 2.9 3 0 0 3 3 3 2 CBS domain NMO PF03060.10 gi|84489243|ref|YP_447475.1| - 4.2e-12 45.8 6.6 7.8e-08 31.8 2.3 2.4 2 1 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 gi|84489243|ref|YP_447475.1| - 9.3e-09 34.5 8.6 2.3e-08 33.2 3.2 2.9 3 1 0 3 3 3 1 FMN-dependent dehydrogenase Glu_synthase PF01645.12 gi|84489243|ref|YP_447475.1| - 4e-05 22.6 5.5 4e-05 22.6 3.8 2.4 2 1 0 2 2 2 1 Conserved region in glutamate synthase His_biosynth PF00977.16 gi|84489243|ref|YP_447475.1| - 0.00038 19.7 6.9 0.0023 17.2 2.0 2.7 2 1 0 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.9 gi|84489243|ref|YP_447475.1| - 0.00075 18.6 1.0 0.00075 18.6 0.7 2.2 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|84489243|ref|YP_447475.1| - 0.0018 17.1 0.6 0.051 12.4 0.0 2.4 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) PEP_mutase PF13714.1 gi|84489243|ref|YP_447475.1| - 0.03 13.5 0.5 0.21 10.7 0.0 2.1 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase DUF824 PF05688.6 gi|84489244|ref|YP_447476.1| - 0.076 12.6 0.1 0.076 12.6 0.1 4.6 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) PMBR PF09373.5 gi|84489245|ref|YP_447477.1| - 1.7e-18 65.5 2.8 4.5e-09 35.8 0.1 2.1 2 0 0 2 2 2 2 Pseudomurein-binding repeat Tir_receptor_M PF03549.9 gi|84489245|ref|YP_447477.1| - 0.0059 16.7 0.1 0.0072 16.4 0.1 1.2 1 0 0 1 1 1 1 Translocated intimin receptor (Tir) intimin-binding domain CcdA PF07362.7 gi|84489245|ref|YP_447477.1| - 0.065 13.1 1.4 0.26 11.2 0.1 2.0 1 1 1 2 2 2 0 Post-segregation antitoxin CcdA NusG PF02357.14 gi|84489245|ref|YP_447477.1| - 0.079 13.2 0.7 0.13 12.4 0.5 1.4 1 1 0 1 1 1 0 Transcription termination factor nusG Imm2 PF14426.1 gi|84489245|ref|YP_447477.1| - 0.092 12.7 0.4 2.2 8.3 0.0 2.4 2 1 0 2 2 2 0 Immunity protein Imm2 Imm3 PF14425.1 gi|84489245|ref|YP_447477.1| - 0.1 12.6 2.5 0.44 10.5 0.2 2.0 1 1 1 2 2 2 0 Immunity protein Imm3 DUF1374 PF07118.6 gi|84489245|ref|YP_447477.1| - 0.24 11.5 6.3 0.34 11.0 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1374) HD PF01966.17 gi|84489246|ref|YP_447478.1| - 1.1e-15 57.7 0.3 2.1e-15 56.7 0.2 1.5 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 gi|84489246|ref|YP_447478.1| - 3.9e-05 23.0 0.0 6.9e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 HDOD domain CTP_transf_2 PF01467.21 gi|84489247|ref|YP_447479.1| - 1.1e-14 54.8 0.0 1.5e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase DUF563 PF04577.9 gi|84489247|ref|YP_447479.1| - 0.0063 16.4 0.0 0.008 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF563) CbiZ PF01955.13 gi|84489248|ref|YP_447480.1| - 4.4e-54 183.1 1.9 5.5e-54 182.8 1.3 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase GSH-S_N PF02951.9 gi|84489248|ref|YP_447480.1| - 0.028 14.2 0.0 0.058 13.2 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain Usp PF00582.21 gi|84489249|ref|YP_447481.1| - 2.2e-20 73.2 0.0 3.1e-20 72.7 0.0 1.2 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.19 gi|84489249|ref|YP_447481.1| - 0.003 16.8 0.0 0.0037 16.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Bac_thur_toxin PF01338.13 gi|84489249|ref|YP_447481.1| - 0.0047 16.1 0.4 0.0055 15.9 0.3 1.2 1 0 0 1 1 1 1 Bacillus thuringiensis toxin DUF3877 PF12993.2 gi|84489249|ref|YP_447481.1| - 0.0083 15.7 0.1 0.0096 15.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function, E. rectale Gene description (DUF3877) Utp13 PF08625.6 gi|84489249|ref|YP_447481.1| - 0.068 12.8 0.2 0.081 12.5 0.1 1.2 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain DUF2806 PF10987.3 gi|84489249|ref|YP_447481.1| - 0.069 12.6 0.1 0.086 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2806) DHQ_synthase PF01761.15 gi|84489249|ref|YP_447481.1| - 0.13 11.1 0.4 0.75 8.6 0.0 2.0 1 1 1 2 2 2 0 3-dehydroquinate synthase ABC_tran PF00005.22 gi|84489250|ref|YP_447482.1| - 4.2e-59 198.7 0.1 6.8e-28 97.6 0.0 2.9 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|84489250|ref|YP_447482.1| - 7.5e-13 49.0 12.7 0.00017 21.6 0.8 5.0 4 1 1 5 5 5 4 AAA domain AAA_15 PF13175.1 gi|84489250|ref|YP_447482.1| - 8e-11 41.6 16.6 0.0014 17.7 0.1 4.3 4 0 0 4 4 4 4 AAA ATPase domain SMC_N PF02463.14 gi|84489250|ref|YP_447482.1| - 9.3e-11 41.3 1.2 0.0005 19.3 0.0 4.0 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_17 PF13207.1 gi|84489250|ref|YP_447482.1| - 4.2e-09 37.2 1.1 0.0027 18.5 0.1 3.5 2 1 1 3 3 3 2 AAA domain AAA_22 PF13401.1 gi|84489250|ref|YP_447482.1| - 5.7e-09 36.1 2.0 0.039 14.0 0.0 4.2 3 1 0 4 4 4 2 AAA domain DUF258 PF03193.11 gi|84489250|ref|YP_447482.1| - 1.9e-06 27.1 0.2 0.031 13.4 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|84489250|ref|YP_447482.1| - 4.1e-06 26.2 0.5 0.028 13.9 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_18 PF13238.1 gi|84489250|ref|YP_447482.1| - 4.6e-06 26.9 4.3 0.16 12.2 0.0 3.9 2 1 0 2 2 2 2 AAA domain AAA_10 PF12846.2 gi|84489250|ref|YP_447482.1| - 6e-06 25.9 0.4 1.4 8.2 0.0 3.7 4 0 0 4 4 3 2 AAA-like domain SbcCD_C PF13558.1 gi|84489250|ref|YP_447482.1| - 4.2e-05 23.3 0.0 0.02 14.8 0.0 3.4 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.1 gi|84489250|ref|YP_447482.1| - 4.6e-05 23.4 0.2 0.44 10.5 0.0 3.1 2 2 0 2 2 2 2 AAA ATPase domain Zeta_toxin PF06414.7 gi|84489250|ref|YP_447482.1| - 0.00011 21.4 0.1 0.62 9.1 0.0 3.3 3 0 0 3 3 3 2 Zeta toxin AAA_25 PF13481.1 gi|84489250|ref|YP_447482.1| - 0.00012 21.5 0.0 9.4 5.5 0.0 4.3 4 0 0 4 4 4 0 AAA domain Arch_ATPase PF01637.13 gi|84489250|ref|YP_447482.1| - 0.00016 21.4 0.1 0.26 10.9 0.0 2.7 2 0 0 2 2 2 2 Archaeal ATPase AAA_30 PF13604.1 gi|84489250|ref|YP_447482.1| - 0.00041 19.9 0.0 0.71 9.4 0.0 2.9 3 0 0 3 3 3 2 AAA domain AAA_14 PF13173.1 gi|84489250|ref|YP_447482.1| - 0.00057 19.7 0.3 2 8.3 0.0 3.6 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.1 gi|84489250|ref|YP_447482.1| - 0.00085 19.7 13.5 0.073 13.3 0.4 3.5 2 2 1 3 3 3 2 AAA domain ATP-synt_ab PF00006.20 gi|84489250|ref|YP_447482.1| - 0.00092 18.7 0.1 0.19 11.1 0.0 2.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain T2SE PF00437.15 gi|84489250|ref|YP_447482.1| - 0.0013 17.7 0.1 0.039 12.8 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein MMR_HSR1 PF01926.18 gi|84489250|ref|YP_447482.1| - 0.0013 18.6 1.9 0.53 10.2 1.0 3.5 2 1 0 2 2 2 1 50S ribosome-binding GTPase cobW PF02492.14 gi|84489250|ref|YP_447482.1| - 0.0014 18.1 4.8 0.0091 15.4 0.0 3.0 3 1 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.1 gi|84489250|ref|YP_447482.1| - 0.002 17.8 0.1 1.2 8.8 0.0 3.3 3 0 0 3 3 3 1 Part of AAA domain AAA_33 PF13671.1 gi|84489250|ref|YP_447482.1| - 0.0022 17.9 0.0 2 8.2 0.0 2.9 3 0 0 3 3 3 1 AAA domain MobB PF03205.9 gi|84489250|ref|YP_447482.1| - 0.01 15.5 0.2 3.8 7.2 0.0 2.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Miro PF08477.8 gi|84489250|ref|YP_447482.1| - 0.019 15.4 0.1 3 8.3 0.0 2.9 2 0 0 2 2 2 0 Miro-like protein AAA PF00004.24 gi|84489250|ref|YP_447482.1| - 0.022 14.9 2.1 3.1 7.9 0.1 3.9 4 1 0 4 4 3 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|84489250|ref|YP_447482.1| - 0.028 13.2 0.2 7.1 5.3 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain UPF0079 PF02367.12 gi|84489250|ref|YP_447482.1| - 0.028 14.0 0.1 0.29 10.7 0.0 2.6 3 0 0 3 3 2 0 Uncharacterised P-loop hydrolase UPF0079 DEAD PF00270.24 gi|84489250|ref|YP_447482.1| - 0.034 13.6 0.1 0.54 9.7 0.0 2.7 3 0 0 3 3 3 0 DEAD/DEAH box helicase PhoH PF02562.11 gi|84489250|ref|YP_447482.1| - 0.045 12.9 0.1 0.36 10.0 0.0 2.4 3 0 0 3 3 2 0 PhoH-like protein FtsK_SpoIIIE PF01580.13 gi|84489250|ref|YP_447482.1| - 0.056 12.9 0.1 7.8 5.9 0.0 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family IstB_IS21 PF01695.12 gi|84489250|ref|YP_447482.1| - 0.065 12.6 0.3 5.8 6.3 0.1 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_5 PF07728.9 gi|84489250|ref|YP_447482.1| - 0.079 12.6 0.0 2.8 7.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.1 gi|84489250|ref|YP_447482.1| - 0.1 12.5 0.0 18 5.2 0.0 2.7 3 0 0 3 3 2 0 AAA domain DUF87 PF01935.12 gi|84489250|ref|YP_447482.1| - 1.5 8.5 10.2 6.8 6.4 0.1 3.6 3 1 1 4 4 4 0 Domain of unknown function DUF87 FlgD_ig PF13860.1 gi|84489251|ref|YP_447483.1| - 2.8e-08 33.3 23.3 2.6 7.8 0.2 8.8 8 0 0 8 8 8 6 FlgD Ig-like domain Big_1 PF02369.11 gi|84489251|ref|YP_447483.1| - 0.00056 19.7 0.8 0.00056 19.7 0.6 11.6 13 2 2 15 15 15 5 Bacterial Ig-like domain (group 1) CdCA1 PF10563.4 gi|84489251|ref|YP_447483.1| - 7.7 5.9 19.1 39 3.6 0.2 5.6 5 0 0 5 5 5 0 Cadmium carbonic anhydrase repeat Glycos_transf_2 PF00535.21 gi|84489252|ref|YP_447484.1| - 4.1e-34 117.6 1.5 4.1e-34 117.6 1.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489252|ref|YP_447484.1| - 3.6e-12 46.5 0.0 4.9e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489252|ref|YP_447484.1| - 8.6e-12 44.7 0.3 8.6e-12 44.7 0.2 1.7 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489252|ref|YP_447484.1| - 0.0038 17.5 0.0 0.0074 16.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 SCPU PF05229.10 gi|84489252|ref|YP_447484.1| - 0.07 13.2 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Spore Coat Protein U domain Glycos_transf_2 PF00535.21 gi|84489253|ref|YP_447485.1| - 4.1e-37 127.4 3.6 8.1e-37 126.4 2.5 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489253|ref|YP_447485.1| - 1.2e-12 48.1 0.0 1.5e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489253|ref|YP_447485.1| - 4.9e-10 38.9 1.7 8.1e-10 38.2 1.2 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489253|ref|YP_447485.1| - 0.0034 17.6 0.1 0.0072 16.6 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 ATP-cone PF03477.11 gi|84489254|ref|YP_447486.1| - 7.2e-08 32.7 0.4 3e-07 30.7 0.1 2.1 2 0 0 2 2 2 1 ATP cone domain AAA_17 PF13207.1 gi|84489254|ref|YP_447486.1| - 1.7e-06 28.8 0.1 8.4e-06 26.6 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489254|ref|YP_447486.1| - 3.7e-06 27.2 1.9 1.5e-05 25.3 0.0 2.6 3 1 0 3 3 3 1 AAA domain Cytidylate_kin2 PF13189.1 gi|84489254|ref|YP_447486.1| - 0.015 15.2 0.4 0.051 13.4 0.0 2.1 2 0 0 2 2 2 0 Cytidylate kinase-like family PRK PF00485.13 gi|84489254|ref|YP_447486.1| - 0.067 12.7 1.0 0.47 9.9 0.7 2.1 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Rubredoxin PF00301.15 gi|84489255|ref|YP_447487.1| - 3e-19 68.5 0.8 3.3e-19 68.4 0.6 1.0 1 0 0 1 1 1 1 Rubredoxin zf-Sec23_Sec24 PF04810.10 gi|84489255|ref|YP_447487.1| - 0.0028 17.1 0.3 0.095 12.2 0.0 2.1 2 0 0 2 2 2 1 Sec23/Sec24 zinc finger zf-C2H2_4 PF13894.1 gi|84489255|ref|YP_447487.1| - 0.0078 16.4 0.4 3.7 8.0 0.0 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-nanos PF05741.8 gi|84489255|ref|YP_447487.1| - 0.017 15.0 0.3 4.5 7.3 0.0 2.3 2 1 0 2 2 2 0 Nanos RNA binding domain Rad50_zn_hook PF04423.9 gi|84489255|ref|YP_447487.1| - 0.028 13.8 0.2 3.1 7.3 0.0 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-ribbon_8 PF09723.5 gi|84489255|ref|YP_447487.1| - 0.031 14.2 0.5 5.2 7.1 0.0 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-H2C2_2 PF13465.1 gi|84489255|ref|YP_447487.1| - 0.067 13.5 0.3 13 6.3 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger double domain UPF0547 PF10571.4 gi|84489255|ref|YP_447487.1| - 0.071 12.8 2.4 2.4 7.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C2H2 PF00096.21 gi|84489255|ref|YP_447487.1| - 0.12 12.7 1.9 2.2 8.7 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-RanBP PF00641.13 gi|84489255|ref|YP_447487.1| - 0.16 11.0 0.4 0.16 11.0 0.3 1.6 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-H2C2_5 PF13909.1 gi|84489255|ref|YP_447487.1| - 0.18 12.1 0.5 0.67 10.3 0.0 1.9 2 0 0 2 2 2 0 C2H2-type zinc-finger domain Desulfoferrod_N PF06397.7 gi|84489255|ref|YP_447487.1| - 0.39 10.1 3.6 0.53 9.7 0.2 2.3 2 1 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Rubredoxin PF00301.15 gi|84489256|ref|YP_447488.1| - 1.3e-22 79.3 4.5 1.5e-22 79.2 3.1 1.0 1 0 0 1 1 1 1 Rubredoxin A2L_zn_ribbon PF08792.5 gi|84489256|ref|YP_447488.1| - 0.0045 16.3 0.8 0.15 11.5 0.0 2.2 2 0 0 2 2 2 1 A2L zinc ribbon domain Elf1 PF05129.8 gi|84489256|ref|YP_447488.1| - 0.013 15.1 0.0 0.19 11.4 0.0 2.0 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like zf-C2H2 PF00096.21 gi|84489256|ref|YP_447488.1| - 0.021 15.1 1.3 4.7 7.7 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type TF_Zn_Ribbon PF08271.7 gi|84489256|ref|YP_447488.1| - 0.025 13.8 2.4 0.23 10.8 0.2 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.5 gi|84489256|ref|YP_447488.1| - 0.035 14.0 0.4 1.1 9.3 0.0 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|84489256|ref|YP_447488.1| - 0.036 13.5 0.9 0.12 11.8 0.6 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|84489256|ref|YP_447488.1| - 0.04 13.1 0.6 0.16 11.2 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-Sec23_Sec24 PF04810.10 gi|84489256|ref|YP_447488.1| - 0.045 13.3 1.2 1.3 8.6 0.0 2.2 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger TFIIS_C PF01096.13 gi|84489256|ref|YP_447488.1| - 0.069 12.7 3.0 0.29 10.8 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-BED PF02892.10 gi|84489256|ref|YP_447488.1| - 0.076 12.7 0.3 3.2 7.5 0.1 2.1 2 0 0 2 2 2 0 BED zinc finger ADK_lid PF05191.9 gi|84489256|ref|YP_447488.1| - 0.12 12.0 0.6 0.48 10.1 0.4 1.8 1 1 0 1 1 1 0 Adenylate kinase, active site lid zf-H2C2_2 PF13465.1 gi|84489256|ref|YP_447488.1| - 0.16 12.3 0.9 6.6 7.2 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_4 PF13894.1 gi|84489256|ref|YP_447488.1| - 0.18 12.2 1.7 3.7 8.0 0.2 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf-Di19 PF05605.7 gi|84489256|ref|YP_447488.1| - 0.21 11.7 1.1 0.27 11.3 0.2 1.6 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|84489256|ref|YP_447488.1| - 0.25 11.2 2.3 0.44 10.3 0.0 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-RanBP PF00641.13 gi|84489256|ref|YP_447488.1| - 0.49 9.5 4.0 0.55 9.3 0.4 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-Mss51 PF13824.1 gi|84489256|ref|YP_447488.1| - 0.58 10.0 2.8 9.8 6.1 0.1 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 UPF0547 PF10571.4 gi|84489256|ref|YP_447488.1| - 0.73 9.5 3.3 11 5.8 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Desulfoferrod_N PF06397.7 gi|84489256|ref|YP_447488.1| - 0.87 9.0 2.7 1.2 8.5 0.4 2.0 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Fe_dep_repr_C PF02742.10 gi|84489257|ref|YP_447489.1| - 2.6e-28 97.5 0.3 5.3e-28 96.5 0.1 1.6 2 0 0 2 2 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|84489257|ref|YP_447489.1| - 5.8e-20 70.9 2.6 8.9e-20 70.3 1.8 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.9 gi|84489257|ref|YP_447489.1| - 6.4e-10 38.8 0.0 1.4e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 FeoA domain HTH_24 PF13412.1 gi|84489257|ref|YP_447489.1| - 2e-06 27.0 0.3 5.4e-06 25.6 0.0 1.9 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|84489257|ref|YP_447489.1| - 9.9e-06 25.1 0.0 8.5e-05 22.1 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|84489257|ref|YP_447489.1| - 1e-05 25.1 0.0 2.4e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|84489257|ref|YP_447489.1| - 2.8e-05 23.8 1.0 6.6e-05 22.6 0.5 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|84489257|ref|YP_447489.1| - 8.1e-05 22.2 0.0 0.00015 21.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|84489257|ref|YP_447489.1| - 0.00021 21.5 0.1 0.00076 19.7 0.0 2.0 3 0 0 3 3 2 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|84489257|ref|YP_447489.1| - 0.00029 20.4 0.2 0.00064 19.3 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.4 gi|84489257|ref|YP_447489.1| - 0.00078 19.3 2.0 0.0053 16.6 0.4 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.5 gi|84489257|ref|YP_447489.1| - 0.0012 18.3 0.0 0.003 17.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_12 PF08461.5 gi|84489257|ref|YP_447489.1| - 0.0027 17.4 0.0 0.0052 16.4 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Rrf2 PF02082.15 gi|84489257|ref|YP_447489.1| - 0.01 15.9 0.0 0.022 14.8 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator FeoC PF09012.5 gi|84489257|ref|YP_447489.1| - 0.012 15.3 0.0 0.027 14.1 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_34 PF13601.1 gi|84489257|ref|YP_447489.1| - 0.017 15.1 0.1 0.039 13.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.9 gi|84489257|ref|YP_447489.1| - 0.026 14.2 1.1 0.68 9.7 0.8 2.4 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_1 PF00126.22 gi|84489257|ref|YP_447489.1| - 0.047 13.4 0.0 0.087 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_20 PF12840.2 gi|84489257|ref|YP_447489.1| - 0.048 13.4 0.0 0.9 9.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|84489257|ref|YP_447489.1| - 0.051 13.3 0.0 0.13 12.0 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|84489257|ref|YP_447489.1| - 0.052 12.9 0.1 0.11 11.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_28 PF13518.1 gi|84489257|ref|YP_447489.1| - 0.059 13.3 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|84489257|ref|YP_447489.1| - 0.077 12.8 0.0 0.17 11.7 0.0 1.7 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC LexA_DNA_bind PF01726.11 gi|84489257|ref|YP_447489.1| - 0.12 11.9 0.0 0.25 10.9 0.0 1.6 1 0 0 1 1 1 0 LexA DNA binding domain AMP-binding PF00501.23 gi|84489258|ref|YP_447490.1| - 2.4e-88 296.3 0.0 2.8e-88 296.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|84489258|ref|YP_447490.1| - 9.2e-11 42.5 0.2 2.3e-10 41.2 0.1 1.7 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Polysacc_synt PF01943.12 gi|84489259|ref|YP_447491.1| - 6.7e-43 146.9 48.3 6.7e-43 146.9 33.5 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|84489259|ref|YP_447491.1| - 5.6e-22 78.1 30.2 5.6e-22 78.1 20.9 4.2 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|84489259|ref|YP_447491.1| - 2.7e-16 59.8 33.8 2.7e-16 59.8 23.5 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein MVIN PF03023.9 gi|84489259|ref|YP_447491.1| - 0.33 9.3 59.4 0.014 13.8 36.4 1.9 1 1 1 2 2 2 0 MviN-like protein PALP PF00291.20 gi|84489260|ref|YP_447492.1| - 1.1e-59 202.1 1.5 1.3e-59 201.9 1.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.21 gi|84489260|ref|YP_447492.1| - 0.015 14.8 0.8 0.16 11.5 0.1 2.6 2 1 0 2 2 2 0 Zinc-binding dehydrogenase Pribosyltran PF00156.22 gi|84489260|ref|YP_447492.1| - 0.081 12.6 2.1 0.27 10.9 0.2 2.5 2 1 0 2 2 2 0 Phosphoribosyl transferase domain DUF3042 PF11240.3 gi|84489260|ref|YP_447492.1| - 0.75 9.6 7.0 2.1 8.2 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3042) Hexapep PF00132.19 gi|84489261|ref|YP_447493.1| - 3.9e-14 51.4 17.8 3.8e-11 41.9 4.8 3.3 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|84489261|ref|YP_447493.1| - 8.6e-10 38.0 17.3 1e-08 34.5 5.5 2.6 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.9 gi|84489261|ref|YP_447493.1| - 0.0018 18.5 0.0 0.0039 17.4 0.0 1.5 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Class_IIIsignal PF04021.7 gi|84489262|ref|YP_447494.1| - 3.8e-06 26.4 2.3 6.6e-06 25.6 1.6 1.4 1 0 0 1 1 1 1 Class III signal peptide DUF1505 PF07403.6 gi|84489262|ref|YP_447494.1| - 0.03 14.2 0.6 0.056 13.3 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1505) FANCAA PF15146.1 gi|84489262|ref|YP_447494.1| - 0.087 11.7 0.2 0.11 11.3 0.1 1.1 1 0 0 1 1 1 0 Fanconi anemia-associated Pico_P2A PF00947.14 gi|84489262|ref|YP_447494.1| - 2.3 8.0 6.0 0.34 10.7 0.5 1.9 1 1 1 2 2 2 0 Picornavirus core protein 2A Peptidase_A24 PF01478.13 gi|84489263|ref|YP_447495.1| - 1.2e-10 41.4 12.2 1.2e-10 41.4 8.5 2.7 1 1 1 2 2 2 1 Type IV leader peptidase family Arc_PepC PF06819.6 gi|84489263|ref|YP_447495.1| - 0.00019 21.2 0.0 0.00039 20.3 0.0 1.4 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminal Domain RHD3 PF05879.7 gi|84489263|ref|YP_447495.1| - 2.4 5.9 4.7 3.3 5.5 3.3 1.1 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) CTP_synth_N PF06418.9 gi|84489264|ref|YP_447496.1| - 2.9e-130 433.2 0.8 4.1e-130 432.8 0.6 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|84489264|ref|YP_447496.1| - 4.4e-51 173.0 0.0 7.4e-51 172.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|84489264|ref|YP_447496.1| - 7.3e-14 51.7 0.0 6.2e-13 48.6 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.19 gi|84489264|ref|YP_447496.1| - 0.00044 19.7 0.0 0.0011 18.4 0.0 1.8 1 0 0 1 1 1 1 DJ-1/PfpI family CbiA PF01656.18 gi|84489264|ref|YP_447496.1| - 0.00054 19.4 0.0 0.0012 18.2 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SNO PF01174.14 gi|84489264|ref|YP_447496.1| - 0.0095 15.5 0.1 0.45 10.1 0.0 2.4 2 0 0 2 2 2 1 SNO glutamine amidotransferase family GATase_3 PF07685.9 gi|84489264|ref|YP_447496.1| - 0.027 14.0 0.1 0.053 13.1 0.0 1.5 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain EcoR124_C PF12008.3 gi|84489265|ref|YP_447497.1| - 1.2e-51 175.5 32.3 1.2e-51 175.5 22.4 2.4 2 1 0 2 2 2 2 Type I restriction and modification enzyme - subunit R C terminal Med11 PF10280.4 gi|84489265|ref|YP_447497.1| - 0.04 13.9 4.5 0.57 10.2 0.1 2.8 1 1 1 2 2 2 0 Mediator complex protein Methylase_S PF01420.14 gi|84489266|ref|YP_447498.1| - 3.7e-22 79.0 11.5 4.2e-22 78.9 8.0 1.0 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain RNA_pol_Rpb1_2 PF00623.15 gi|84489266|ref|YP_447498.1| - 0.033 14.1 0.9 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 RNA polymerase Rpb1, domain 2 REF PF05755.7 gi|84489266|ref|YP_447498.1| - 0.075 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) DUF3580 PF12117.3 gi|84489266|ref|YP_447498.1| - 0.11 12.5 0.3 0.19 11.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3580) CNP1 PF08750.6 gi|84489267|ref|YP_447499.1| - 0.086 12.5 0.4 0.19 11.3 0.1 1.9 2 0 0 2 2 2 0 CNP1-like family DUF3253 PF11625.3 gi|84489267|ref|YP_447499.1| - 0.15 11.9 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3253) DUF2393 PF09624.5 gi|84489267|ref|YP_447499.1| - 2.2 7.8 20.1 4.2 6.8 5.5 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2393) KH_dom-like PF14714.1 gi|84489268|ref|YP_447500.1| - 0.025 14.5 0.1 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Exo_endo_phos_2 PF14529.1 gi|84489269|ref|YP_447501.1| - 2e-06 27.4 0.1 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.18 gi|84489269|ref|YP_447501.1| - 3.7e-05 23.7 0.6 4.3e-05 23.5 0.4 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family TPR_MLP1_2 PF07926.7 gi|84489270|ref|YP_447502.1| - 0.012 15.4 0.9 0.027 14.2 0.6 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF3981 PF13139.1 gi|84489270|ref|YP_447502.1| - 0.052 13.5 0.2 0.81 9.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3981) SipA PF09052.5 gi|84489271|ref|YP_447503.1| - 0.13 10.6 6.9 0.17 10.2 4.8 1.1 1 0 0 1 1 1 0 Salmonella invasion protein A YopD PF05844.7 gi|84489271|ref|YP_447503.1| - 0.18 10.7 5.2 0.18 10.8 3.0 1.4 1 1 0 1 1 1 0 YopD protein IncA PF04156.9 gi|84489271|ref|YP_447503.1| - 0.27 10.7 2.5 0.36 10.4 1.7 1.2 1 0 0 1 1 1 0 IncA protein Latarcin PF10279.4 gi|84489271|ref|YP_447503.1| - 4.2 7.6 8.1 27 5.0 5.6 2.3 1 1 0 1 1 1 0 Latarcin precursor DUF972 PF06156.8 gi|84489271|ref|YP_447503.1| - 6.1 7.2 11.4 4 7.8 6.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF972) Antitoxin-MazE PF04014.13 gi|84489272|ref|YP_447504.1| - 0.00049 19.7 2.7 0.0032 17.1 0.0 2.6 3 0 0 3 3 3 1 Antidote-toxin recognition MazE Ribosomal_S4e PF00900.15 gi|84489272|ref|YP_447504.1| - 0.021 14.4 0.3 0.042 13.5 0.2 1.6 1 1 0 1 1 1 0 Ribosomal family S4e Post_transc_reg PF13797.1 gi|84489272|ref|YP_447504.1| - 0.082 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Post-transcriptional regulator HTH_AsnC-type PF13404.1 gi|84489273|ref|YP_447505.1| - 4.7e-07 29.2 0.2 6.6e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|84489273|ref|YP_447505.1| - 7.5e-06 25.2 0.6 1.4e-05 24.4 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.1 gi|84489273|ref|YP_447505.1| - 0.0022 17.5 0.1 0.0042 16.6 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain PRESAN PF09687.5 gi|84489273|ref|YP_447505.1| - 0.0025 17.8 0.8 0.003 17.5 0.5 1.3 1 1 0 1 1 1 1 Plasmodium RESA N-terminal DUF2951 PF11166.3 gi|84489273|ref|YP_447505.1| - 0.0055 16.5 3.5 0.006 16.4 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2951) YkyA PF10368.4 gi|84489273|ref|YP_447505.1| - 0.025 13.8 2.8 0.03 13.6 2.0 1.1 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein Tn7_Tnp_TnsA_C PF08721.6 gi|84489273|ref|YP_447505.1| - 0.033 14.2 1.0 0.11 12.5 0.7 1.8 1 1 0 1 1 1 0 TnsA endonuclease C terminal AsnC_trans_reg PF01037.16 gi|84489273|ref|YP_447505.1| - 0.049 13.3 0.1 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 AsnC family Syd PF07348.7 gi|84489273|ref|YP_447505.1| - 0.059 12.6 0.2 0.067 12.5 0.1 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) PqqD PF05402.7 gi|84489273|ref|YP_447505.1| - 0.068 13.1 0.2 0.17 11.9 0.1 1.6 1 1 1 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) DUF4473 PF14747.1 gi|84489273|ref|YP_447505.1| - 0.072 13.3 0.6 0.09 13.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) z-alpha PF02295.12 gi|84489273|ref|YP_447505.1| - 0.077 12.7 0.4 0.21 11.4 0.3 1.8 1 1 0 1 1 1 0 Adenosine deaminase z-alpha domain DUF3713 PF12506.3 gi|84489273|ref|YP_447505.1| - 0.078 13.0 3.1 0.083 12.9 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3713) DUF3970 PF13113.1 gi|84489273|ref|YP_447505.1| - 0.096 12.3 0.4 0.17 11.6 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) Myb_DNA-bind_6 PF13921.1 gi|84489273|ref|YP_447505.1| - 0.14 12.2 0.4 0.21 11.7 0.3 1.4 1 1 0 1 1 1 0 Myb-like DNA-binding domain BLOC1_2 PF10046.4 gi|84489273|ref|YP_447505.1| - 0.28 11.3 4.7 0.67 10.1 3.2 1.7 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 RNA_pol_A_CTD PF03118.10 gi|84489273|ref|YP_447505.1| - 0.42 10.0 3.0 0.21 11.0 0.6 1.6 2 0 0 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain Latarcin PF10279.4 gi|84489273|ref|YP_447505.1| - 0.61 10.3 2.6 0.76 10.0 1.8 1.1 1 0 0 1 1 1 0 Latarcin precursor HTH_Mga PF08280.6 gi|84489274|ref|YP_447506.1| - 0.012 15.3 1.0 0.028 14.1 0.3 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain DUF2971 PF11185.3 gi|84489275|ref|YP_447507.1| - 4.7e-12 46.4 2.5 4.7e-12 46.4 1.8 3.4 3 1 0 3 3 3 1 Protein of unknown function (DUF2971) SEC-C PF02810.10 gi|84489276|ref|YP_447508.1| - 9.9e-09 34.5 13.9 2.2e-08 33.4 9.6 1.6 1 0 0 1 1 1 1 SEC-C motif DUF1802 PF08819.6 gi|84489277|ref|YP_447509.1| - 6.5e-43 146.3 0.0 7.3e-43 146.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) DUF1659 PF07872.6 gi|84489277|ref|YP_447509.1| - 0.15 11.6 1.4 6.3 6.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1659) SNF2_N PF00176.18 gi|84489278|ref|YP_447510.1| - 5.2e-09 35.3 0.0 8.6e-09 34.6 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.10 gi|84489278|ref|YP_447510.1| - 4.3e-05 23.4 2.7 7.4e-05 22.6 0.0 2.5 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|84489279|ref|YP_447511.1| - 3.9e-13 49.0 0.2 5.8e-12 45.3 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|84489279|ref|YP_447511.1| - 1e-06 28.3 0.9 0.0024 17.4 0.0 3.2 3 0 0 3 3 3 2 DEAD/DEAH box helicase SNF2_N PF00176.18 gi|84489279|ref|YP_447511.1| - 2.3e-05 23.3 0.1 2.3e-05 23.3 0.1 2.4 2 1 1 3 3 3 1 SNF2 family N-terminal domain AAA_34 PF13872.1 gi|84489279|ref|YP_447511.1| - 0.053 12.2 0.2 0.66 8.6 0.0 2.2 2 0 0 2 2 2 0 P-loop containing NTP hydrolase pore-1 DUF4360 PF14273.1 gi|84489279|ref|YP_447511.1| - 0.11 12.1 1.2 1.6 8.3 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4360) Prok-TraM PF09228.5 gi|84489279|ref|YP_447511.1| - 0.12 12.5 0.1 0.12 12.5 0.1 2.6 3 0 0 3 3 3 0 Prokaryotic Transcriptional repressor TraM DUF4391 PF14335.1 gi|84489280|ref|YP_447512.1| - 8.9e-57 192.0 23.2 1e-56 191.8 16.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4391) Caleosin PF05042.8 gi|84489280|ref|YP_447512.1| - 0.0075 15.8 0.6 0.085 12.4 0.1 2.1 2 0 0 2 2 2 1 Caleosin related protein DNA_repr_REX1B PF14966.1 gi|84489280|ref|YP_447512.1| - 0.032 14.6 1.4 0.032 14.6 1.0 1.9 2 0 0 2 2 2 0 DNA repair REX1-B N6_N4_Mtase PF01555.13 gi|84489281|ref|YP_447513.1| - 3.8e-23 82.2 3.8 6.1e-23 81.5 2.6 1.4 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.10 gi|84489281|ref|YP_447513.1| - 0.084 12.2 0.1 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Vinculin PF01044.14 gi|84489281|ref|YP_447513.1| - 0.23 9.4 0.0 1.4 6.8 0.0 1.9 2 0 0 2 2 2 0 Vinculin family MULE PF10551.4 gi|84489282|ref|YP_447514.1| - 0.0016 18.5 0.1 0.0077 16.3 0.0 2.2 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_IS240 PF13610.1 gi|84489282|ref|YP_447514.1| - 0.0018 18.2 2.5 0.0018 18.2 1.7 2.7 2 1 0 3 3 3 1 DDE domain Zn-ribbon_8 PF09723.5 gi|84489282|ref|YP_447514.1| - 0.11 12.4 3.0 2.2 8.2 0.2 2.6 2 0 0 2 2 2 0 Zinc ribbon domain Transposase_mut PF00872.13 gi|84489282|ref|YP_447514.1| - 0.22 10.0 6.5 0.15 10.5 2.1 2.3 2 1 0 2 2 2 0 Transposase, Mutator family zf-ISL3 PF14690.1 gi|84489282|ref|YP_447514.1| - 0.38 10.8 13.5 2.4 8.2 9.4 2.4 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|84489282|ref|YP_447514.1| - 1.5 8.6 10.0 4 7.3 7.0 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain N6_N4_Mtase PF01555.13 gi|84489283|ref|YP_447515.1| - 6.4e-07 29.0 0.1 1.5e-06 27.8 0.0 1.7 2 0 0 2 2 2 1 DNA methylase ResIII PF04851.10 gi|84489284|ref|YP_447516.1| - 8.4e-18 64.8 1.2 3.6e-17 62.7 0.1 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|84489284|ref|YP_447516.1| - 2.1e-08 33.8 0.0 5.1e-08 32.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase S6PP PF05116.8 gi|84489284|ref|YP_447516.1| - 0.0018 17.6 0.1 0.0032 16.8 0.0 1.3 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase PhoH PF02562.11 gi|84489284|ref|YP_447516.1| - 0.002 17.3 0.6 0.028 13.6 0.0 2.6 3 0 0 3 3 3 1 PhoH-like protein UPF0093 PF03653.8 gi|84489286|ref|YP_447518.1| - 0.0067 16.3 0.4 0.012 15.5 0.1 1.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0093) DUF1516 PF07457.6 gi|84489286|ref|YP_447518.1| - 0.014 15.4 0.6 0.014 15.4 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1516) Vma12 PF11712.3 gi|84489286|ref|YP_447518.1| - 0.71 9.5 4.6 4.1 7.0 2.5 2.2 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TcpE PF12648.2 gi|84489286|ref|YP_447518.1| - 9.5 6.4 8.7 2.7 8.1 0.3 2.3 2 0 0 2 2 2 0 TcpE family EcoR124_C PF12008.3 gi|84489288|ref|YP_447520.1| - 2e-55 187.8 33.2 2e-55 187.8 23.0 3.8 4 1 2 6 6 6 1 Type I restriction and modification enzyme - subunit R C terminal HSDR_N PF04313.9 gi|84489288|ref|YP_447520.1| - 1.1e-33 116.6 6.6 1.1e-33 116.6 4.6 3.4 4 1 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|84489288|ref|YP_447520.1| - 1.7e-31 109.4 4.9 1.7e-31 109.4 3.4 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|84489288|ref|YP_447520.1| - 2.1e-10 40.3 0.7 6e-10 38.8 0.5 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase T2SE PF00437.15 gi|84489288|ref|YP_447520.1| - 0.024 13.5 0.2 0.054 12.4 0.1 1.7 1 0 0 1 1 1 0 Type II/IV secretion system protein Methylase_S PF01420.14 gi|84489289|ref|YP_447521.1| - 2.8e-09 37.1 16.5 3.2e-09 36.9 11.4 1.0 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain Peptidase_M10 PF00413.19 gi|84489289|ref|YP_447521.1| - 0.079 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Matrixin N6_Mtase PF02384.11 gi|84489290|ref|YP_447522.1| - 9.9e-121 402.5 0.7 1.6e-120 401.9 0.5 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|84489290|ref|YP_447522.1| - 3.3e-28 98.8 5.5 3.3e-28 98.8 3.8 2.8 3 1 0 3 3 3 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|84489290|ref|YP_447522.1| - 4.3e-14 52.5 0.0 7.3e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84489290|ref|YP_447522.1| - 7.9e-08 31.8 0.0 3.2e-07 29.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.13 gi|84489290|ref|YP_447522.1| - 1e-06 28.4 0.0 2.4e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.6 gi|84489290|ref|YP_447522.1| - 1.9e-06 28.2 0.0 6.4e-06 26.4 0.0 2.0 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Methyltransf_31 PF13847.1 gi|84489290|ref|YP_447522.1| - 3.3e-05 23.5 0.0 8e-05 22.2 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84489290|ref|YP_447522.1| - 0.001 19.5 0.0 0.0025 18.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|84489290|ref|YP_447522.1| - 0.0073 15.7 0.0 0.019 14.3 0.0 1.6 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Creatinase_N PF01321.13 gi|84489290|ref|YP_447522.1| - 0.041 14.3 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 Creatinase/Prolidase N-terminal domain DUF4279 PF14106.1 gi|84489290|ref|YP_447522.1| - 0.17 11.8 1.0 1.3 8.9 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4279) Methyltransf_12 PF08242.7 gi|84489290|ref|YP_447522.1| - 0.35 11.3 2.0 2.2 8.8 0.0 2.9 3 0 0 3 3 3 0 Methyltransferase domain Methylase_S PF01420.14 gi|84489291|ref|YP_447523.1| - 1e-20 74.4 31.5 5.3e-19 68.8 6.6 2.6 2 1 0 2 2 2 2 Type I restriction modification DNA specificity domain Med6 PF04934.9 gi|84489291|ref|YP_447523.1| - 0.086 12.3 2.9 0.071 12.6 0.5 2.0 2 0 0 2 2 2 0 MED6 mediator sub complex component FliJ PF02050.11 gi|84489291|ref|YP_447523.1| - 0.33 11.0 3.6 0.39 10.7 0.3 2.3 2 0 0 2 2 2 0 Flagellar FliJ protein Phage_int_SAM_1 PF02899.12 gi|84489292|ref|YP_447524.1| - 0.042 13.9 0.1 0.07 13.2 0.0 1.4 1 1 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain DUF2373 PF10180.4 gi|84489293|ref|YP_447525.1| - 0.074 12.6 1.7 0.72 9.4 1.2 2.6 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) Methylase_S PF01420.14 gi|84489294|ref|YP_447526.1| - 2.3e-18 66.7 11.2 2.7e-18 66.4 7.8 1.1 1 0 0 1 1 1 1 Type I restriction modification DNA specificity domain Methylase_S PF01420.14 gi|84489295|ref|YP_447527.1| - 1.1e-21 77.5 38.5 5.8e-20 71.9 12.2 2.7 2 1 0 2 2 2 2 Type I restriction modification DNA specificity domain UN_NPL4 PF11543.3 gi|84489295|ref|YP_447527.1| - 0.011 15.9 0.7 0.46 10.8 0.1 2.6 2 0 0 2 2 2 0 Nuclear pore localisation protein NPL4 PhosphMutase PF10143.4 gi|84489296|ref|YP_447528.1| - 4.8e-50 169.5 0.0 6.6e-50 169.1 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|84489296|ref|YP_447528.1| - 5.2e-47 160.3 0.0 1e-46 159.3 0.0 1.5 1 1 0 1 1 1 1 Metalloenzyme superfamily DUF1768 PF08719.6 gi|84489297|ref|YP_447529.1| - 9.6e-10 38.4 0.0 1.2e-09 38.1 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1768) Homoserine_dh PF00742.14 gi|84489298|ref|YP_447530.1| - 1.5e-57 194.1 1.2 2.1e-57 193.6 0.2 1.7 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|84489298|ref|YP_447530.1| - 7.5e-10 39.2 0.1 2.4e-09 37.6 0.0 2.0 2 1 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|84489298|ref|YP_447530.1| - 1.4e-06 28.1 0.4 4e-06 26.5 0.3 1.9 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACT PF01842.20 gi|84489299|ref|YP_447531.1| - 5.1e-05 22.6 1.1 0.00041 19.7 0.0 2.6 1 1 1 2 2 2 1 ACT domain Glu-tRNAGln PF02686.10 gi|84489300|ref|YP_447532.1| - 0.00056 19.6 0.4 0.00073 19.2 0.3 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit EntA_Immun PF08951.5 gi|84489300|ref|YP_447532.1| - 0.027 14.5 2.2 0.036 14.2 1.5 1.1 1 0 0 1 1 1 0 Enterocin A Immunity Prefoldin PF02996.12 gi|84489300|ref|YP_447532.1| - 0.038 13.6 0.2 0.042 13.5 0.2 1.2 1 0 0 1 1 1 0 Prefoldin subunit Hrs_helical PF12210.3 gi|84489300|ref|YP_447532.1| - 0.056 13.6 0.4 0.065 13.4 0.3 1.1 1 0 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Vac14_Fig4_bd PF11916.3 gi|84489300|ref|YP_447532.1| - 0.088 11.9 0.1 0.091 11.9 0.1 1.1 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding Asn_synthase PF00733.16 gi|84489301|ref|YP_447533.1| - 1.4e-52 178.7 0.1 2.1e-52 178.1 0.1 1.3 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.1 gi|84489301|ref|YP_447533.1| - 7.6e-26 90.2 0.0 1.6e-25 89.2 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|84489301|ref|YP_447533.1| - 4.7e-21 75.1 0.0 4e-19 68.9 0.0 2.4 2 1 0 2 2 2 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|84489301|ref|YP_447533.1| - 2.3e-08 33.1 0.1 0.0055 15.4 0.0 3.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II NAD_synthase PF02540.12 gi|84489301|ref|YP_447533.1| - 0.00042 19.3 0.2 0.00079 18.3 0.2 1.4 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|84489301|ref|YP_447533.1| - 0.00045 18.8 0.0 0.001 17.6 0.0 1.5 1 1 0 1 1 1 1 tRNA methyl transferase QueC PF06508.8 gi|84489301|ref|YP_447533.1| - 0.00094 18.5 0.1 0.0015 17.8 0.0 1.4 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Glycos_transf_2 PF00535.21 gi|84489303|ref|YP_447535.1| - 4.4e-49 166.4 6.6 2.6e-24 85.8 0.3 2.9 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489303|ref|YP_447535.1| - 2.2e-24 86.5 0.0 1.9e-11 44.1 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase like family 2 DUF616 PF04765.8 gi|84489303|ref|YP_447535.1| - 4.3e-13 49.0 10.6 1e-12 47.8 5.9 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF616) Glycos_transf_1 PF00534.15 gi|84489303|ref|YP_447535.1| - 1.2e-08 34.5 0.0 1.5e-07 30.9 0.0 2.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84489303|ref|YP_447535.1| - 7.5e-06 26.1 0.0 2.7e-05 24.3 0.0 2.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_2_3 PF13632.1 gi|84489303|ref|YP_447535.1| - 2.5e-05 24.0 0.0 0.053 13.2 0.0 2.4 2 0 0 2 2 2 2 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.1 gi|84489303|ref|YP_447535.1| - 0.00026 20.3 0.0 0.049 12.9 0.0 2.6 2 0 0 2 2 2 2 Glycosyl transferase family 21 Glycos_transf_2 PF00535.21 gi|84489304|ref|YP_447536.1| - 7.4e-54 181.9 8.4 1.8e-34 118.8 0.7 2.6 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489304|ref|YP_447536.1| - 2.4e-24 86.4 0.0 1.8e-15 57.3 0.0 2.7 3 1 0 3 3 3 2 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489304|ref|YP_447536.1| - 9.8e-23 80.6 12.8 7.5e-17 61.3 1.5 2.7 3 0 0 3 3 3 2 Glycosyltransferase like family 2 NTP_transferase PF00483.18 gi|84489304|ref|YP_447536.1| - 4.6e-05 22.8 0.3 0.00033 20.0 0.1 2.4 2 0 0 2 2 2 1 Nucleotidyl transferase Glyco_tranf_2_4 PF13704.1 gi|84489304|ref|YP_447536.1| - 0.00039 20.6 0.1 0.091 13.0 0.0 2.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 KIP1 PF07765.7 gi|84489305|ref|YP_447537.1| - 0.051 13.4 0.6 0.051 13.4 0.4 3.0 2 1 2 4 4 4 0 KIP1-like protein DUF904 PF06005.7 gi|84489305|ref|YP_447537.1| - 0.057 13.7 40.7 0.06 13.6 6.7 4.1 1 1 2 3 3 3 0 Protein of unknown function (DUF904) Trp_dioxygenase PF03301.8 gi|84489305|ref|YP_447537.1| - 0.29 10.2 12.8 0.39 9.7 8.6 1.4 1 1 0 1 1 1 0 Tryptophan 2,3-dioxygenase YjcZ PF13990.1 gi|84489305|ref|YP_447537.1| - 1.4 8.0 12.2 4.5 6.3 1.8 2.2 1 1 1 2 2 2 0 YjcZ-like protein HAUS-augmin3 PF14932.1 gi|84489305|ref|YP_447537.1| - 3 6.9 31.3 2.1 7.4 9.0 2.8 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 DUF1875 PF08961.5 gi|84489305|ref|YP_447537.1| - 4.4 6.5 19.0 0.23 10.7 2.0 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1875) APG6 PF04111.7 gi|84489305|ref|YP_447537.1| - 9.6 5.1 33.8 18 4.2 15.3 2.1 1 1 1 2 2 2 0 Autophagy protein Apg6 NPV_P10 PF05531.7 gi|84489305|ref|YP_447537.1| - 9.7 6.5 14.3 0.19 12.0 2.2 3.0 2 2 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Glycos_transf_2 PF00535.21 gi|84489306|ref|YP_447538.1| - 1.5e-69 233.0 28.4 1.9e-34 118.8 1.8 3.9 4 0 0 4 4 4 3 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489306|ref|YP_447538.1| - 1.9e-21 76.9 0.0 1.1e-08 35.1 0.0 3.2 3 0 0 3 3 3 3 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489306|ref|YP_447538.1| - 3.9e-21 75.3 31.7 9.7e-13 47.8 3.8 3.8 4 0 0 4 4 4 3 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489306|ref|YP_447538.1| - 1.7e-07 31.4 0.7 5.3e-06 26.6 0.1 3.1 3 0 0 3 3 3 1 Glycosyl transferase family 2 Glycos_transf_2 PF00535.21 gi|84489307|ref|YP_447539.1| - 7.1e-48 162.4 19.6 1.3e-39 135.5 1.2 3.5 3 0 0 3 3 3 3 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489307|ref|YP_447539.1| - 3.7e-16 59.6 0.0 1.6e-12 47.7 0.0 3.0 3 0 0 3 3 3 2 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489307|ref|YP_447539.1| - 2.1e-14 53.2 3.3 2.1e-14 53.2 2.3 3.2 3 0 0 3 3 3 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489307|ref|YP_447539.1| - 0.00014 22.1 0.1 0.00039 20.6 0.1 1.8 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|84489307|ref|YP_447539.1| - 0.084 12.1 0.1 12 5.1 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase family 21 GST_C PF00043.20 gi|84489307|ref|YP_447539.1| - 0.35 10.8 3.7 0.28 11.1 0.1 2.7 4 0 0 4 4 4 0 Glutathione S-transferase, C-terminal domain HhH-GPD PF00730.20 gi|84489308|ref|YP_447540.1| - 3.9e-25 88.2 0.0 5.7e-25 87.6 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|84489308|ref|YP_447540.1| - 2e-11 42.8 0.0 6.4e-11 41.3 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|84489308|ref|YP_447540.1| - 2.6e-05 24.2 0.1 0.001 19.1 0.1 2.4 1 1 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|84489308|ref|YP_447540.1| - 0.0016 18.3 0.0 1.1 9.1 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix motif DUF2400 PF09674.5 gi|84489308|ref|YP_447540.1| - 0.0023 17.6 0.2 0.015 14.9 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2400) EndIII_4Fe-2S PF10576.4 gi|84489308|ref|YP_447540.1| - 0.035 14.2 0.8 0.061 13.5 0.6 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III DUF2335 PF10097.4 gi|84489308|ref|YP_447540.1| - 0.088 12.4 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2335) HHH_8 PF14716.1 gi|84489308|ref|YP_447540.1| - 0.11 12.6 0.0 0.69 10.1 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix domain EPSP_synthase PF00275.15 gi|84489309|ref|YP_447541.1| - 1.8e-121 405.4 0.0 2.1e-121 405.3 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) tRNA-synt_1 PF00133.17 gi|84489310|ref|YP_447542.1| - 1e-152 509.2 2.8 5.7e-152 506.8 1.9 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|84489310|ref|YP_447542.1| - 6.3e-37 126.6 0.1 1.3e-36 125.7 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|84489310|ref|YP_447542.1| - 1.6e-27 96.1 9.8 5.2e-16 58.2 0.1 4.3 3 1 1 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|84489310|ref|YP_447542.1| - 2.6e-07 30.1 0.0 2.6e-06 26.8 0.0 2.4 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|84489310|ref|YP_447542.1| - 2.7e-07 30.0 0.0 0.0034 16.5 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|84489310|ref|YP_447542.1| - 0.0018 17.0 0.0 0.01 14.5 0.0 2.2 3 0 0 3 3 3 1 tRNA synthetases class I (K) Plasmid_stabil PF05016.9 gi|84489310|ref|YP_447542.1| - 0.037 14.4 0.1 0.22 11.9 0.0 2.3 2 0 0 2 2 2 0 Plasmid stabilisation system protein VOMI PF03762.12 gi|84489310|ref|YP_447542.1| - 0.086 12.7 1.3 0.92 9.4 0.1 2.4 2 0 0 2 2 2 0 Vitelline membrane outer layer protein I (VOMI) Glycos_transf_2 PF00535.21 gi|84489311|ref|YP_447543.1| - 2e-25 89.4 2.5 2e-25 89.4 1.7 2.4 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|84489311|ref|YP_447543.1| - 9.9e-21 74.0 8.1 9.9e-21 74.0 5.6 3.2 3 1 0 3 3 3 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|84489311|ref|YP_447543.1| - 2.8e-14 53.4 0.0 5.9e-14 52.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|84489311|ref|YP_447543.1| - 5e-13 48.7 5.2 8.2e-13 48.0 1.9 2.3 1 1 1 2 2 2 1 Glycosyltransferase like family Glyco_trans_1_2 PF13524.1 gi|84489311|ref|YP_447543.1| - 1.3e-12 47.7 0.0 6.4e-12 45.5 0.0 2.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_7C PF02709.9 gi|84489311|ref|YP_447543.1| - 1.1e-05 24.7 0.0 3.8e-05 23.0 0.0 1.9 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase DUF3880 PF12996.2 gi|84489311|ref|YP_447543.1| - 0.00092 19.0 0.4 0.0039 17.0 0.1 2.2 2 0 0 2 2 2 1 DUF based on E. rectale Gene description (DUF3880) Glyco_trans_2_3 PF13632.1 gi|84489311|ref|YP_447543.1| - 0.0014 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|84489311|ref|YP_447543.1| - 0.031 14.5 0.0 0.11 12.8 0.0 1.9 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|84489311|ref|YP_447543.1| - 0.1 11.8 0.0 0.73 9.0 0.0 2.2 1 1 0 1 1 1 0 Glycosyl transferase family 21 zf-ribbon_3 PF13248.1 gi|84489312|ref|YP_447544.1| - 1.8e-05 23.7 1.7 2.6e-05 23.2 1.2 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489312|ref|YP_447544.1| - 0.00012 21.8 2.9 0.00016 21.4 2.0 1.2 1 0 0 1 1 1 1 Double zinc ribbon Trypan_glycop_C PF10659.4 gi|84489312|ref|YP_447544.1| - 0.0015 18.7 0.7 0.0019 18.4 0.5 1.1 1 0 0 1 1 1 1 Trypanosome variant surface glycoprotein C-terminal domain zinc_ribbon_2 PF13240.1 gi|84489312|ref|YP_447544.1| - 0.0047 16.3 5.8 0.0093 15.4 4.0 1.6 1 1 0 1 1 1 1 zinc-ribbon domain ODV-E18 PF10717.4 gi|84489312|ref|YP_447544.1| - 0.0071 15.7 1.5 0.0071 15.7 1.1 1.7 2 1 0 2 2 2 1 Occlusion-derived virus envelope protein ODV-E18 Anoctamin PF04547.7 gi|84489312|ref|YP_447544.1| - 0.0072 15.0 0.1 0.0083 14.8 0.1 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel EVI2A PF05399.6 gi|84489312|ref|YP_447544.1| - 0.008 15.4 1.0 0.0098 15.1 0.7 1.1 1 0 0 1 1 1 1 Ectropic viral integration site 2A protein (EVI2A) GP41 PF00517.12 gi|84489312|ref|YP_447544.1| - 0.014 14.9 5.0 0.016 14.7 3.5 1.1 1 0 0 1 1 1 0 Retroviral envelope protein LRRC37AB_C PF14914.1 gi|84489312|ref|YP_447544.1| - 0.02 14.3 2.9 0.023 14.1 2.0 1.2 1 1 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain ABC2_membrane_2 PF12679.2 gi|84489312|ref|YP_447544.1| - 0.021 13.7 0.2 0.026 13.4 0.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein TF_Zn_Ribbon PF08271.7 gi|84489312|ref|YP_447544.1| - 0.043 13.1 5.5 0.16 11.3 3.8 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zf-FPG_IleRS PF06827.9 gi|84489312|ref|YP_447544.1| - 0.088 12.4 0.4 1.1 8.9 0.0 2.2 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Spt4 PF06093.8 gi|84489312|ref|YP_447544.1| - 0.1 12.4 5.3 0.16 11.9 3.6 1.3 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger Rubredoxin PF00301.15 gi|84489312|ref|YP_447544.1| - 0.53 10.2 2.8 8.8 6.2 0.1 2.8 2 1 1 3 3 3 0 Rubredoxin Tetraspannin PF00335.15 gi|84489312|ref|YP_447544.1| - 0.76 9.0 6.9 1.2 8.3 4.8 1.4 1 1 0 1 1 1 0 Tetraspanin family Amnionless PF14828.1 gi|84489312|ref|YP_447544.1| - 1.1 7.6 7.0 3.2 6.1 4.0 1.8 1 1 0 1 1 1 0 Amnionless zf-BED PF02892.10 gi|84489312|ref|YP_447544.1| - 1.3 8.8 4.4 2.3 8.0 3.0 1.6 1 0 0 1 1 1 0 BED zinc finger RecR PF02132.10 gi|84489312|ref|YP_447544.1| - 1.4 8.4 4.4 2.2 7.7 3.0 1.3 1 0 0 1 1 1 0 RecR protein Zn_ribbon_recom PF13408.1 gi|84489312|ref|YP_447544.1| - 2.3 8.5 6.8 1.6 9.0 1.2 2.2 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain A2L_zn_ribbon PF08792.5 gi|84489312|ref|YP_447544.1| - 2.6 7.5 8.3 12 5.5 0.8 2.3 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-FCS PF06467.9 gi|84489312|ref|YP_447544.1| - 7.8 6.2 7.5 2.5 7.8 0.6 2.3 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif DUF972 PF06156.8 gi|84489313|ref|YP_447545.1| - 0.016 15.5 6.7 0.021 15.1 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF972) Spore_II_R PF09551.5 gi|84489313|ref|YP_447545.1| - 0.022 14.8 1.7 0.027 14.5 1.2 1.1 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) Peroxin-13_N PF04088.8 gi|84489313|ref|YP_447545.1| - 0.022 14.7 0.7 0.12 12.3 0.5 1.9 1 1 0 1 1 1 0 Peroxin 13, N-terminal region DRY_EERY PF09750.4 gi|84489313|ref|YP_447545.1| - 0.13 12.4 3.3 0.14 12.2 2.3 1.2 1 0 0 1 1 1 0 Alternative splicing regulator DUF2992 PF11208.3 gi|84489313|ref|YP_447545.1| - 0.3 10.9 6.7 0.38 10.6 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) IncA PF04156.9 gi|84489313|ref|YP_447545.1| - 2.4 7.7 4.6 3.2 7.3 3.2 1.3 1 0 0 1 1 1 0 IncA protein Sec62 PF03839.11 gi|84489313|ref|YP_447545.1| - 2.4 7.4 8.4 3 7.1 5.8 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Macoilin PF09726.4 gi|84489313|ref|YP_447545.1| - 2.5 6.2 8.3 3 6.0 5.7 1.0 1 0 0 1 1 1 0 Transmembrane protein TcdB_N PF12918.2 gi|84489313|ref|YP_447545.1| - 2.6 8.1 12.4 0.67 10.0 5.1 2.5 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain Peptidase_S49_N PF08496.5 gi|84489313|ref|YP_447545.1| - 4.3 7.1 6.5 5.2 6.8 4.5 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal SAE2 PF08573.5 gi|84489313|ref|YP_447545.1| - 5 7.9 6.7 8 7.2 4.7 1.5 1 1 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus CENP-H PF05837.7 gi|84489314|ref|YP_447546.1| - 0.022 14.9 1.8 0.052 13.7 1.0 1.8 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF2712 PF10916.3 gi|84489314|ref|YP_447546.1| - 0.026 14.4 3.5 0.024 14.6 1.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2712) DUF3139 PF11337.3 gi|84489314|ref|YP_447546.1| - 0.042 14.1 0.9 0.042 14.1 0.6 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3139) ABC2_membrane_3 PF12698.2 gi|84489314|ref|YP_447546.1| - 7 5.5 14.5 12 4.7 10.1 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF165 PF02592.10 gi|84489315|ref|YP_447547.1| - 2.3e-29 102.4 10.1 2.3e-29 102.4 7.0 2.0 2 0 0 2 2 2 1 Uncharacterized ACR, YhhQ family COG1738 TMC PF07810.8 gi|84489315|ref|YP_447547.1| - 1.4 9.4 6.3 22 5.4 0.0 2.8 2 1 0 2 2 2 0 TMC domain AIF_C PF14721.1 gi|84489316|ref|YP_447548.1| - 0.00024 21.3 0.1 0.00035 20.8 0.1 1.2 1 0 0 1 1 1 1 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF3836 PF12930.2 gi|84489316|ref|YP_447548.1| - 0.00092 18.7 0.1 0.0014 18.1 0.1 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF3836) ABC2_membrane_5 PF13346.1 gi|84489316|ref|YP_447548.1| - 0.069 12.4 1.3 0.1 11.8 0.9 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Chordopox_A13L PF05961.6 gi|84489316|ref|YP_447548.1| - 0.085 12.8 0.3 0.17 11.8 0.2 1.5 1 0 0 1 1 1 0 Chordopoxvirus A13L protein MacB_PCD PF12704.2 gi|84489316|ref|YP_447548.1| - 0.098 12.2 1.2 0.15 11.6 0.8 1.3 1 1 0 1 1 1 0 MacB-like periplasmic core domain Sigma_reg_N PF13800.1 gi|84489316|ref|YP_447548.1| - 0.26 11.3 1.6 0.28 11.2 0.5 1.5 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF1510 PF07423.6 gi|84489317|ref|YP_447549.1| - 1.4e-05 24.5 7.5 1.9e-05 24.1 5.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1510) Shisa PF13908.1 gi|84489317|ref|YP_447549.1| - 0.00014 22.0 2.2 0.00018 21.7 1.6 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF4097 PF13349.1 gi|84489317|ref|YP_447549.1| - 0.0035 16.8 5.1 0.0055 16.2 3.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4097) Presenilin PF01080.12 gi|84489317|ref|YP_447549.1| - 0.0062 15.4 1.7 0.0071 15.2 1.2 1.2 1 0 0 1 1 1 1 Presenilin FAM163 PF15069.1 gi|84489317|ref|YP_447549.1| - 0.014 15.9 0.1 0.017 15.7 0.1 1.2 1 0 0 1 1 1 0 FAM163 family Mucin PF01456.12 gi|84489317|ref|YP_447549.1| - 0.024 14.4 14.0 0.03 14.1 9.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Tetraspannin PF00335.15 gi|84489317|ref|YP_447549.1| - 0.026 13.7 0.2 0.033 13.4 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Peptidase_S49_N PF08496.5 gi|84489317|ref|YP_447549.1| - 0.032 14.0 0.8 0.056 13.2 0.5 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Alpha_GJ PF03229.8 gi|84489317|ref|YP_447549.1| - 0.037 14.3 1.6 0.053 13.8 1.1 1.2 1 0 0 1 1 1 0 Alphavirus glycoprotein J Neur_chan_memb PF02932.11 gi|84489317|ref|YP_447549.1| - 0.037 13.9 0.5 0.047 13.5 0.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Tir_receptor_C PF07489.6 gi|84489317|ref|YP_447549.1| - 0.039 13.6 8.5 0.048 13.4 5.9 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus Sigma_reg_N PF13800.1 gi|84489317|ref|YP_447549.1| - 0.046 13.7 4.5 0.077 13.0 3.1 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal PTS_EIIC PF02378.13 gi|84489317|ref|YP_447549.1| - 0.046 12.5 0.3 0.059 12.1 0.2 1.1 1 0 0 1 1 1 0 Phosphotransferase system, EIIC SpoIIIAH PF12685.2 gi|84489317|ref|YP_447549.1| - 0.064 12.7 9.4 0.011 15.2 4.2 1.4 2 0 0 2 2 2 0 SpoIIIAH-like protein SID-1_RNA_chan PF13965.1 gi|84489317|ref|YP_447549.1| - 0.073 11.2 1.1 0.079 11.1 0.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Mem_trans PF03547.13 gi|84489317|ref|YP_447549.1| - 0.084 11.1 1.6 0.082 11.1 1.1 1.0 1 0 0 1 1 1 0 Membrane transport protein DUF3139 PF11337.3 gi|84489317|ref|YP_447549.1| - 0.093 13.0 5.7 0.12 12.6 2.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) DUF3357 PF11837.3 gi|84489317|ref|YP_447549.1| - 0.093 12.5 6.6 8.6 6.2 4.6 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) CreD PF06123.7 gi|84489317|ref|YP_447549.1| - 0.1 11.0 0.3 0.12 10.9 0.2 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD Herpes_LMP1 PF05297.6 gi|84489317|ref|YP_447549.1| - 0.15 10.9 0.4 0.19 10.6 0.3 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Neur PF00064.13 gi|84489317|ref|YP_447549.1| - 0.49 8.4 7.0 0.58 8.1 4.8 1.1 1 0 0 1 1 1 0 Neuraminidase DUF2149 PF09919.4 gi|84489317|ref|YP_447549.1| - 0.56 10.3 6.9 1.4 9.0 4.3 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) Tim54 PF11711.3 gi|84489317|ref|YP_447549.1| - 0.62 8.5 5.3 0.74 8.3 3.7 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF2147 PF09917.4 gi|84489317|ref|YP_447549.1| - 1.5 9.1 5.7 2.3 8.5 3.9 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2147) AIF_C PF14721.1 gi|84489317|ref|YP_447549.1| - 1.7 8.8 5.9 2.9 8.1 4.1 1.5 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Dicty_REP PF05086.7 gi|84489317|ref|YP_447549.1| - 2.5 5.7 13.6 2.7 5.6 9.4 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF4278 PF14105.1 gi|84489317|ref|YP_447549.1| - 2.8 7.9 6.4 6.8 6.7 4.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4278) DUF1628 PF07790.6 gi|84489317|ref|YP_447549.1| - 5.4 7.8 7.4 13 6.6 5.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) DUF1980 PF09323.5 gi|84489317|ref|YP_447549.1| - 8.5 6.0 9.1 3.1 7.4 4.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DHH PF01368.15 gi|84489318|ref|YP_447550.1| - 1.1e-10 41.3 0.0 2e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 DHH family tRNA_anti-codon PF01336.20 gi|84489318|ref|YP_447550.1| - 4.3e-08 32.8 0.1 1.1e-07 31.5 0.1 1.8 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain S1 PF00575.18 gi|84489318|ref|YP_447550.1| - 0.0013 18.8 1.4 0.0089 16.1 1.0 2.4 1 1 0 1 1 1 1 S1 RNA binding domain DivIC PF04977.10 gi|84489319|ref|YP_447551.1| - 0.046 13.2 0.5 0.046 13.2 0.3 2.9 3 1 0 3 3 3 0 Septum formation initiator GPAT_N PF14829.1 gi|84489319|ref|YP_447551.1| - 0.066 12.9 0.8 0.79 9.4 0.0 2.4 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal Prefoldin PF02996.12 gi|84489319|ref|YP_447551.1| - 0.094 12.3 9.0 0.35 10.5 0.4 3.2 4 0 0 4 4 4 0 Prefoldin subunit WSS_VP PF12175.3 gi|84489319|ref|YP_447551.1| - 0.12 11.4 1.8 0.65 9.0 0.1 2.2 2 0 0 2 2 2 0 White spot syndrome virus structural envelope protein VP DUF4407 PF14362.1 gi|84489319|ref|YP_447551.1| - 0.26 10.1 1.6 0.26 10.2 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF837 PF05769.6 gi|84489319|ref|YP_447551.1| - 0.44 10.0 8.9 0.14 11.6 2.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF837) IncA PF04156.9 gi|84489319|ref|YP_447551.1| - 1 8.9 8.5 2.1 7.8 1.3 2.1 1 1 1 2 2 2 0 IncA protein KMP11 PF03037.11 gi|84489319|ref|YP_447551.1| - 1.6 9.3 10.8 0.38 11.3 4.0 2.3 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 TMF_DNA_bd PF12329.3 gi|84489319|ref|YP_447551.1| - 2.6 7.9 9.9 1.5 8.6 1.1 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding FadA PF09403.5 gi|84489319|ref|YP_447551.1| - 5.2 7.0 15.9 0.86 9.6 2.5 2.6 1 1 1 2 2 2 0 Adhesion protein FadA Aminotran_1_2 PF00155.16 gi|84489320|ref|YP_447552.1| - 5.7e-69 232.7 0.3 6.4e-69 232.6 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|84489320|ref|YP_447552.1| - 2.3e-07 29.4 2.1 4e-07 28.6 0.5 1.9 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|84489320|ref|YP_447552.1| - 1.1e-06 27.9 2.2 1.4e-06 27.6 0.7 1.7 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|84489320|ref|YP_447552.1| - 7.1e-06 25.0 0.9 2.4e-05 23.2 0.1 1.9 1 1 1 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|84489320|ref|YP_447552.1| - 0.00033 19.9 0.1 0.00048 19.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.15 gi|84489320|ref|YP_447552.1| - 0.015 13.8 0.1 0.027 13.0 0.1 1.4 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain DUF4359 PF14271.1 gi|84489320|ref|YP_447552.1| - 0.076 13.3 0.6 0.31 11.4 0.1 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4359) Trigger_C PF05698.9 gi|84489320|ref|YP_447552.1| - 0.076 12.8 0.1 0.22 11.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial trigger factor protein (TF) C-terminus Radical_SAM PF04055.16 gi|84489321|ref|YP_447553.1| - 3.5e-16 59.8 0.4 7e-16 58.8 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|84489321|ref|YP_447553.1| - 0.007 16.4 0.7 0.6 10.2 0.1 2.6 1 1 1 2 2 2 1 4Fe-4S single cluster domain B12-binding PF02310.14 gi|84489321|ref|YP_447553.1| - 0.016 15.0 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain MarR PF01047.17 gi|84489322|ref|YP_447554.1| - 3.8e-12 45.7 0.4 1.4e-11 43.9 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.1 gi|84489322|ref|YP_447554.1| - 1.4e-07 30.7 0.0 2.4e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|84489322|ref|YP_447554.1| - 5.9e-06 26.2 0.3 1.2e-05 25.2 0.2 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|84489322|ref|YP_447554.1| - 1.7e-05 24.3 0.0 2.3e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 MarR family HxlR PF01638.12 gi|84489322|ref|YP_447554.1| - 2.6e-05 23.7 0.4 8e-05 22.2 0.1 1.8 1 1 1 2 2 2 1 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|84489322|ref|YP_447554.1| - 2.8e-05 24.3 0.0 5.9e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.9 gi|84489322|ref|YP_447554.1| - 0.00067 19.3 0.1 0.0019 17.9 0.0 1.7 1 1 1 2 2 2 1 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|84489322|ref|YP_447554.1| - 0.00082 19.0 0.0 0.0015 18.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|84489322|ref|YP_447554.1| - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.1 gi|84489322|ref|YP_447554.1| - 0.0027 17.4 0.1 0.0058 16.4 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_38 PF13936.1 gi|84489322|ref|YP_447554.1| - 0.0031 17.0 0.4 0.01 15.3 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|84489322|ref|YP_447554.1| - 0.0044 16.7 0.3 0.0098 15.6 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.7 gi|84489322|ref|YP_447554.1| - 0.0045 16.6 0.1 0.011 15.3 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.1 gi|84489322|ref|YP_447554.1| - 0.0068 16.0 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_AsnC-type PF13404.1 gi|84489322|ref|YP_447554.1| - 0.014 14.8 0.0 0.022 14.2 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain GntR PF00392.16 gi|84489322|ref|YP_447554.1| - 0.024 14.0 0.0 0.041 13.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_28 PF13518.1 gi|84489322|ref|YP_447554.1| - 0.025 14.6 0.0 0.04 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.7 gi|84489322|ref|YP_447554.1| - 0.027 14.0 0.9 0.081 12.4 0.1 2.1 3 0 0 3 3 2 0 DeoR-like helix-turn-helix domain DUF1539 PF07560.6 gi|84489322|ref|YP_447554.1| - 0.035 13.9 0.5 0.12 12.2 0.0 1.9 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1539) Penicillinase_R PF03965.11 gi|84489322|ref|YP_447554.1| - 0.039 14.0 0.2 0.086 12.9 0.1 1.7 1 1 0 1 1 1 0 Penicillinase repressor HTH_3 PF01381.17 gi|84489322|ref|YP_447554.1| - 0.053 13.3 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix Sigma70_r4 PF04545.11 gi|84489322|ref|YP_447554.1| - 0.054 12.8 0.0 0.097 11.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_29 PF13551.1 gi|84489322|ref|YP_447554.1| - 0.061 13.4 0.0 0.084 13.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix TFIIE_alpha PF02002.12 gi|84489322|ref|YP_447554.1| - 0.073 12.5 1.0 0.21 11.0 0.2 1.9 1 1 1 2 2 2 0 TFIIE alpha subunit MerR PF00376.18 gi|84489322|ref|YP_447554.1| - 0.082 12.4 0.1 0.18 11.4 0.0 1.6 1 1 0 1 1 1 0 MerR family regulatory protein MatE PF01554.13 gi|84489323|ref|YP_447555.1| - 2.5e-48 163.7 48.4 2e-28 99.0 7.5 3.4 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.1 gi|84489323|ref|YP_447555.1| - 7e-12 45.3 24.4 7.9e-10 38.7 3.3 5.1 3 2 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.12 gi|84489323|ref|YP_447555.1| - 0.00013 21.3 53.6 0.00065 19.0 14.3 3.1 1 1 1 3 3 3 2 Polysaccharide biosynthesis protein CTP_transf_2 PF01467.21 gi|84489324|ref|YP_447556.1| - 2.1e-13 50.5 0.1 3.6e-13 49.8 0.1 1.3 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|84489324|ref|YP_447556.1| - 0.0024 17.5 0.0 0.0031 17.1 0.0 1.3 1 0 0 1 1 1 1 FAD synthetase Pantoate_ligase PF02569.10 gi|84489324|ref|YP_447556.1| - 0.026 13.3 0.1 0.09 11.5 0.0 1.8 1 1 1 2 2 2 0 Pantoate-beta-alanine ligase Glyco_trans_1_3 PF13528.1 gi|84489325|ref|YP_447557.1| - 4.6e-32 111.4 0.0 7.2e-32 110.8 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|84489325|ref|YP_447557.1| - 3.4e-11 43.0 0.2 6.6e-11 42.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_4_2 PF13477.1 gi|84489325|ref|YP_447557.1| - 0.00013 21.7 2.9 0.00013 21.7 2.0 2.5 2 2 0 2 2 2 1 Glycosyl transferase 4-like Alg14 PF08660.6 gi|84489325|ref|YP_447557.1| - 0.062 13.2 0.0 0.27 11.2 0.0 1.9 2 0 0 2 2 2 0 Oligosaccharide biosynthesis protein Alg14 like DUF2547 PF10818.3 gi|84489325|ref|YP_447557.1| - 0.12 13.0 2.1 18 6.0 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2547) Lactamase_B_3 PF13483.1 gi|84489326|ref|YP_447558.1| - 9.3e-26 90.4 0.1 1.1e-25 90.2 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|84489326|ref|YP_447558.1| - 1.5e-24 86.6 0.3 1.8e-24 86.3 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|84489326|ref|YP_447558.1| - 5e-11 42.6 0.3 7.2e-11 42.1 0.2 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily FbpA PF05833.6 gi|84489327|ref|YP_447559.1| - 6.5e-108 361.1 24.6 8.3e-108 360.8 17.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|84489327|ref|YP_447559.1| - 1.9e-26 91.7 0.1 6.7e-26 90.0 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF814) H2TH PF06831.9 gi|84489327|ref|YP_447559.1| - 0.0037 16.9 1.7 0.0058 16.3 0.0 2.2 3 0 0 3 3 3 1 Formamidopyrimidine-DNA glycosylase H2TH domain DUF1664 PF07889.7 gi|84489327|ref|YP_447559.1| - 3.4 7.4 8.9 0.62 9.8 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) DUF552 PF04472.7 gi|84489327|ref|YP_447559.1| - 4.4 7.3 6.4 55 3.7 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF552) Ribosomal_S13 PF00416.17 gi|84489327|ref|YP_447559.1| - 6.3 7.2 12.7 0.093 13.1 1.7 3.2 3 2 0 3 3 3 0 Ribosomal protein S13/S18 CBFD_NFYB_HMF PF00808.18 gi|84489328|ref|YP_447560.1| - 8.7e-19 67.3 0.7 9.5e-19 67.2 0.5 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84489328|ref|YP_447560.1| - 4.6e-14 52.2 0.1 4.8e-14 52.2 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|84489328|ref|YP_447560.1| - 3.4e-06 27.1 0.1 3.8e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S TAF PF02969.12 gi|84489328|ref|YP_447560.1| - 2.6e-05 24.0 0.4 2.7e-05 24.0 0.3 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-31kDa PF02291.10 gi|84489328|ref|YP_447560.1| - 0.014 15.2 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit CENP-T PF15511.1 gi|84489328|ref|YP_447560.1| - 0.017 14.4 0.6 0.017 14.4 0.4 1.3 1 1 0 1 1 1 0 Centromere kinetochore component CENP-T Bromo_TP PF07524.8 gi|84489328|ref|YP_447560.1| - 0.073 12.8 0.0 0.076 12.7 0.0 1.1 1 0 0 1 1 1 0 Bromodomain associated Cation_efflux PF01545.16 gi|84489329|ref|YP_447561.1| - 5.1e-55 186.5 16.9 5.8e-55 186.3 11.7 1.0 1 0 0 1 1 1 1 Cation efflux family PRA1 PF03208.14 gi|84489329|ref|YP_447561.1| - 0.37 10.1 8.2 0.73 9.1 5.5 1.7 1 1 0 1 1 1 0 PRA1 family protein DUF898 PF05987.8 gi|84489329|ref|YP_447561.1| - 4.4 6.1 10.0 0.63 8.8 4.3 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) TGT PF01702.13 gi|84489330|ref|YP_447562.1| - 5.9e-51 173.0 0.3 9.1e-51 172.4 0.2 1.3 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.1 gi|84489330|ref|YP_447562.1| - 4.8e-30 103.2 0.1 2.8e-28 97.5 0.0 2.6 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|84489330|ref|YP_447562.1| - 2e-17 62.6 0.0 2.8e-16 59.0 0.0 2.5 2 0 0 2 2 2 1 PUA domain DUF832 PF05734.6 gi|84489330|ref|YP_447562.1| - 0.029 13.6 0.3 0.061 12.5 0.2 1.5 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) PyrI PF01948.13 gi|84489331|ref|YP_447563.1| - 4e-36 122.9 3.4 6.2e-36 122.3 2.4 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|84489331|ref|YP_447563.1| - 1.6e-21 75.4 4.6 2.5e-21 74.8 3.2 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DNA_pol3_theta PF06440.6 gi|84489331|ref|YP_447563.1| - 0.025 14.1 0.1 0.06 12.9 0.1 1.7 1 0 0 1 1 1 0 DNA polymerase III, theta subunit UPF0047 PF01894.12 gi|84489332|ref|YP_447564.1| - 7.5e-35 119.3 0.5 1e-34 118.8 0.3 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Orbi_NS3 PF01616.11 gi|84489332|ref|YP_447564.1| - 0.059 12.3 0.3 0.068 12.1 0.2 1.1 1 0 0 1 1 1 0 Orbivirus NS3 Baculo_ME53 PF06061.6 gi|84489332|ref|YP_447564.1| - 0.33 9.9 1.5 0.39 9.6 1.1 1.1 1 0 0 1 1 1 0 Baculoviridae ME53 DUF4325 PF14213.1 gi|84489333|ref|YP_447565.1| - 0.00031 20.3 2.3 0.00087 18.8 1.6 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4325) Aldo_ket_red PF00248.16 gi|84489334|ref|YP_447566.1| - 1.1e-37 129.4 0.0 1.4e-37 129.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_18 PF13746.1 gi|84489334|ref|YP_447566.1| - 1.9e-08 34.5 5.8 5.4e-06 26.7 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489334|ref|YP_447566.1| - 4.9e-08 33.2 13.2 1.1e-07 32.0 9.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489334|ref|YP_447566.1| - 2.9e-07 30.6 12.2 7.5e-07 29.3 8.4 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489334|ref|YP_447566.1| - 3.7e-06 26.8 11.5 3.7e-06 26.8 7.9 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489334|ref|YP_447566.1| - 0.00031 20.5 6.6 0.012 15.4 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489334|ref|YP_447566.1| - 0.00055 19.6 16.7 0.0035 17.0 2.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|84489334|ref|YP_447566.1| - 0.0046 16.5 3.4 0.0046 16.5 2.4 2.4 1 1 1 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.1 gi|84489334|ref|YP_447566.1| - 0.0087 16.7 10.5 0.069 13.8 1.8 2.8 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84489334|ref|YP_447566.1| - 0.012 15.5 9.3 0.036 13.9 0.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489334|ref|YP_447566.1| - 0.041 14.2 14.3 0.13 12.6 10.0 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489334|ref|YP_447566.1| - 0.049 13.9 4.6 0.049 13.9 3.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.22 gi|84489334|ref|YP_447566.1| - 0.1 12.2 13.6 0.04 13.5 1.9 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84489334|ref|YP_447566.1| - 6.2 6.8 13.7 0.57 10.1 1.8 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain B5 PF03484.10 gi|84489335|ref|YP_447567.1| - 6.4e-23 80.3 2.9 1.1e-19 69.9 0.4 3.7 3 0 0 3 3 3 2 tRNA synthetase B5 domain B3_4 PF03483.12 gi|84489335|ref|YP_447567.1| - 4.3e-16 58.8 0.2 1.7e-15 56.8 0.1 2.0 2 0 0 2 2 2 1 B3/4 domain tRNA-synt_2d PF01409.15 gi|84489335|ref|YP_447567.1| - 0.0012 18.0 1.0 0.0029 16.8 0.7 1.6 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Ribosomal_S25 PF03297.10 gi|84489335|ref|YP_447567.1| - 0.2 11.7 2.1 1.6 8.8 0.1 2.8 3 0 0 3 3 3 0 S25 ribosomal protein DUF2456 PF10445.4 gi|84489336|ref|YP_447568.1| - 0.047 13.6 3.5 0.068 13.0 2.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2456) HTH_3 PF01381.17 gi|84489337|ref|YP_447569.1| - 5.1e-05 23.0 0.0 9.5e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|84489337|ref|YP_447569.1| - 0.00011 22.1 0.0 0.0004 20.3 0.0 1.8 1 1 1 2 2 2 1 Helix-turn-helix domain DUF4473 PF14747.1 gi|84489337|ref|YP_447569.1| - 0.0055 16.9 0.0 0.0098 16.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4473) HTH_5 PF01022.15 gi|84489337|ref|YP_447569.1| - 0.0069 16.0 0.0 0.013 15.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|84489337|ref|YP_447569.1| - 0.0085 15.4 0.0 0.038 13.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_37 PF13744.1 gi|84489337|ref|YP_447569.1| - 0.016 14.9 0.1 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|84489337|ref|YP_447569.1| - 0.03 13.7 0.0 0.053 13.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.1 gi|84489337|ref|YP_447569.1| - 0.073 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_1 PF00126.22 gi|84489337|ref|YP_447569.1| - 0.14 11.9 0.0 0.36 10.6 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Glu_cys_ligase PF04262.9 gi|84489338|ref|YP_447570.1| - 4.4e-95 318.3 7.7 3.6e-74 249.5 2.3 2.1 1 1 1 2 2 2 2 Glutamate-cysteine ligase Flavin_Reduct PF01613.13 gi|84489339|ref|YP_447571.1| - 2.6e-26 92.3 0.0 3.2e-26 92.0 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Flavin_Reduct PF01613.13 gi|84489340|ref|YP_447572.1| - 1.4e-24 86.6 0.0 1.7e-24 86.4 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain NTP_transferase PF00483.18 gi|84489341|ref|YP_447573.1| - 6e-16 58.4 0.0 8.2e-16 58.0 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|84489341|ref|YP_447573.1| - 4e-06 26.9 0.0 6e-06 26.4 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|84489341|ref|YP_447573.1| - 0.17 11.3 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Epimerase PF01370.16 gi|84489342|ref|YP_447574.1| - 8.2e-31 107.2 0.0 1e-30 106.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|84489342|ref|YP_447574.1| - 7.1e-16 57.9 0.2 7e-15 54.6 0.1 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|84489342|ref|YP_447574.1| - 1.6e-12 46.7 0.0 2.5e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|84489342|ref|YP_447574.1| - 8.6e-12 44.5 0.0 2.4e-11 43.0 0.0 1.6 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|84489342|ref|YP_447574.1| - 1.2e-09 37.4 0.6 1.1e-08 34.2 0.4 2.1 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 gi|84489342|ref|YP_447574.1| - 0.18 11.7 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 NADH(P)-binding DegT_DnrJ_EryC1 PF01041.12 gi|84489343|ref|YP_447575.1| - 1.2e-96 323.9 0.0 1.6e-96 323.5 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|84489343|ref|YP_447575.1| - 1e-05 24.4 0.0 0.00036 19.3 0.0 2.1 2 0 0 2 2 2 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|84489343|ref|YP_447575.1| - 5.1e-05 22.4 0.0 0.00016 20.7 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|84489343|ref|YP_447575.1| - 0.00034 19.0 0.0 0.00057 18.2 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|84489343|ref|YP_447575.1| - 0.00053 19.2 0.0 0.0009 18.4 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase DUF3832 PF12909.2 gi|84489343|ref|YP_447575.1| - 0.025 14.6 0.1 0.087 12.8 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) HpcH_HpaI PF03328.9 gi|84489344|ref|YP_447576.1| - 3.1e-07 29.5 0.0 4e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PfkB PF00294.19 gi|84489345|ref|YP_447577.1| - 1e-33 116.7 0.0 1.7e-33 116.0 0.0 1.3 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|84489345|ref|YP_447577.1| - 0.00014 21.1 0.0 0.0002 20.6 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase TPP_enzyme_N PF02776.13 gi|84489346|ref|YP_447578.1| - 1.8e-47 161.0 0.0 2.8e-47 160.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|84489346|ref|YP_447578.1| - 1.5e-29 102.5 0.0 1.6e-28 99.2 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|84489346|ref|YP_447578.1| - 4e-29 101.1 0.0 8.8e-29 100.0 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Epimerase PF01370.16 gi|84489347|ref|YP_447579.1| - 4.2e-29 101.6 0.0 5.1e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|84489347|ref|YP_447579.1| - 1.2e-09 38.4 0.0 1.5e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 NADH(P)-binding 3Beta_HSD PF01073.14 gi|84489347|ref|YP_447579.1| - 1.3e-06 27.3 0.0 4e-06 25.7 0.0 1.7 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|84489347|ref|YP_447579.1| - 0.00045 19.2 0.0 0.032 13.1 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.12 gi|84489347|ref|YP_447579.1| - 0.0038 16.1 0.0 1 8.2 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain Glycos_transf_2 PF00535.21 gi|84489348|ref|YP_447580.1| - 1.3e-21 77.0 1.1 2.4e-21 76.1 0.8 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489348|ref|YP_447580.1| - 1.9e-08 34.4 0.0 2.6e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489348|ref|YP_447580.1| - 0.017 15.4 0.0 0.038 14.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 2 Wzz PF02706.10 gi|84489348|ref|YP_447580.1| - 0.71 9.6 3.9 4.9 6.9 0.1 2.4 1 1 1 2 2 2 0 Chain length determinant protein dTDP_sugar_isom PF00908.12 gi|84489349|ref|YP_447581.1| - 8.2e-77 256.5 0.2 9.3e-77 256.3 0.2 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase FdtA PF05523.6 gi|84489349|ref|YP_447581.1| - 0.043 13.3 0.0 0.92 9.0 0.0 2.1 1 1 1 2 2 2 0 WxcM-like, C-terminal FMN_red PF03358.10 gi|84489350|ref|YP_447582.1| - 1.3e-33 115.6 0.0 1.7e-33 115.2 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489350|ref|YP_447582.1| - 3.3e-10 39.8 0.0 3.9e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Glycos_transf_2 PF00535.21 gi|84489351|ref|YP_447583.1| - 3.6e-30 104.8 0.1 4.7e-30 104.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489351|ref|YP_447583.1| - 0.00013 21.8 0.0 0.00015 21.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|84489351|ref|YP_447583.1| - 0.0082 16.4 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|84489351|ref|YP_447583.1| - 0.15 11.3 0.0 0.22 10.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 DUF2304 PF10066.4 gi|84489352|ref|YP_447584.1| - 1.8e-38 130.8 7.9 2e-38 130.7 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) Polysacc_synt_3 PF13440.1 gi|84489352|ref|YP_447584.1| - 0.011 15.1 4.1 0.012 15.0 2.8 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ER_lumen_recept PF00810.13 gi|84489352|ref|YP_447584.1| - 0.32 11.4 6.8 1.5 9.2 1.4 2.1 1 1 1 2 2 2 0 ER lumen protein retaining receptor Vpu PF00558.14 gi|84489352|ref|YP_447584.1| - 0.36 10.4 0.0 0.36 10.4 0.0 2.6 2 1 1 3 3 3 0 Vpu protein DUF3754 PF12576.3 gi|84489352|ref|YP_447584.1| - 0.51 9.9 3.2 0.88 9.1 2.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3754) DUF3139 PF11337.3 gi|84489352|ref|YP_447584.1| - 0.59 10.4 0.1 0.59 10.4 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3139) Peptidase_M56 PF05569.6 gi|84489352|ref|YP_447584.1| - 0.66 8.9 5.1 0.48 9.3 2.5 1.5 2 0 0 2 2 2 0 BlaR1 peptidase M56 TcpE PF12648.2 gi|84489352|ref|YP_447584.1| - 1.3 9.2 8.9 0.12 12.5 1.0 2.0 1 1 1 2 2 2 0 TcpE family HXXEE PF13787.1 gi|84489352|ref|YP_447584.1| - 4.9 7.5 8.5 2.5 8.4 3.8 2.1 1 1 1 2 2 2 0 Protein of unknown function with HXXEE motif PrgI PF12666.2 gi|84489352|ref|YP_447584.1| - 5.6 7.1 7.6 6.1 7.0 2.2 2.0 1 1 1 2 2 2 0 PrgI family protein NAC PF01849.13 gi|84489353|ref|YP_447585.1| - 1.9e-19 68.9 5.3 3e-19 68.2 3.7 1.3 1 0 0 1 1 1 1 NAC domain UBA PF00627.26 gi|84489353|ref|YP_447585.1| - 0.0019 17.9 0.0 0.0019 17.9 0.0 2.2 3 0 0 3 3 3 1 UBA/TS-N domain UBA_4 PF14555.1 gi|84489353|ref|YP_447585.1| - 0.022 14.2 0.0 0.036 13.6 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain SPT6_acidic PF14632.1 gi|84489353|ref|YP_447585.1| - 0.1 12.7 1.8 0.1 12.7 0.9 1.4 1 1 0 1 1 1 0 Acidic N-terminal SPT6 Flavodoxin_5 PF12724.2 gi|84489353|ref|YP_447585.1| - 0.28 11.1 2.2 1.5 8.8 0.4 2.3 2 0 0 2 2 2 0 Flavodoxin domain Metallophos_2 PF12850.2 gi|84489354|ref|YP_447586.1| - 6.2e-17 61.8 0.1 9.4e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84489354|ref|YP_447586.1| - 2.2e-15 56.5 0.7 3.8e-15 55.8 0.5 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase MutL PF13941.1 gi|84489354|ref|YP_447586.1| - 0.07 11.4 0.0 0.098 10.9 0.0 1.1 1 0 0 1 1 1 0 MutL protein RNase_Zc3h12a PF11977.3 gi|84489355|ref|YP_447587.1| - 8.1e-22 77.7 0.0 1.3e-21 77.0 0.0 1.4 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain MAD PF05557.8 gi|84489356|ref|YP_447588.1| - 0.13 10.3 0.1 0.17 9.9 0.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein MMTV_SAg PF01054.12 gi|84489357|ref|YP_447589.1| - 0.1 11.4 0.3 0.12 11.2 0.2 1.2 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen Mem_trans PF03547.13 gi|84489357|ref|YP_447589.1| - 0.16 10.2 1.1 0.17 10.1 0.7 1.1 1 0 0 1 1 1 0 Membrane transport protein Shisa PF13908.1 gi|84489357|ref|YP_447589.1| - 0.24 11.5 3.4 0.51 10.4 2.4 1.6 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator MDFI PF15316.1 gi|84489357|ref|YP_447589.1| - 2 8.3 7.9 2.7 7.9 5.5 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF1675 PF07897.6 gi|84489357|ref|YP_447589.1| - 4.4 7.1 13.6 5.2 6.8 9.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1675) DUF605 PF04652.11 gi|84489357|ref|YP_447589.1| - 6.4 6.0 18.2 7.5 5.8 12.6 1.0 1 0 0 1 1 1 0 Vta1 like Apt1 PF10351.4 gi|84489357|ref|YP_447589.1| - 8.7 5.0 12.2 9.5 4.9 8.5 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Mitofilin PF09731.4 gi|84489358|ref|YP_447590.1| - 1.4e-05 23.9 2.4 1.6e-05 23.8 1.7 1.0 1 0 0 1 1 1 1 Mitochondrial inner membrane protein DUF1510 PF07423.6 gi|84489358|ref|YP_447590.1| - 7.3e-05 22.2 9.4 8.8e-05 21.9 6.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) Peptidase_S49_N PF08496.5 gi|84489358|ref|YP_447590.1| - 0.0033 17.2 0.5 0.0043 16.8 0.3 1.1 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Tetraspannin PF00335.15 gi|84489358|ref|YP_447590.1| - 0.005 16.1 0.7 0.0061 15.8 0.5 1.1 1 0 0 1 1 1 1 Tetraspanin family ABC2_membrane_3 PF12698.2 gi|84489358|ref|YP_447590.1| - 0.007 15.4 3.1 0.011 14.7 2.2 1.4 1 0 0 1 1 1 1 ABC-2 family transporter protein Neur_chan_memb PF02932.11 gi|84489358|ref|YP_447590.1| - 0.02 14.8 4.4 0.024 14.5 3.1 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CKAP2_C PF15297.1 gi|84489358|ref|YP_447590.1| - 0.022 13.5 5.4 0.024 13.4 3.7 1.0 1 0 0 1 1 1 0 Cytoskeleton-associated protein 2 C-terminus IgaA PF07095.6 gi|84489358|ref|YP_447590.1| - 0.022 12.5 0.2 0.024 12.3 0.1 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA SID-1_RNA_chan PF13965.1 gi|84489358|ref|YP_447590.1| - 0.11 10.6 1.8 0.14 10.3 1.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 UPF0118 PF01594.11 gi|84489358|ref|YP_447590.1| - 0.15 11.0 0.5 0.17 10.8 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF20 SpoIIIAH PF12685.2 gi|84489358|ref|YP_447590.1| - 0.15 11.5 11.5 0.3 10.5 8.0 1.5 1 1 0 1 1 1 0 SpoIIIAH-like protein Shisa PF13908.1 gi|84489358|ref|YP_447590.1| - 0.17 12.0 7.6 0.31 11.1 5.3 1.4 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator FAM70 PF14967.1 gi|84489358|ref|YP_447590.1| - 0.39 9.8 2.2 0.49 9.5 1.5 1.0 1 0 0 1 1 1 0 FAM70 protein SelP_N PF04592.9 gi|84489358|ref|YP_447590.1| - 1.3 8.3 7.8 1.6 8.0 5.4 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Chordopox_A13L PF05961.6 gi|84489358|ref|YP_447590.1| - 1.4 8.9 12.5 37 4.3 8.7 2.8 1 1 0 1 1 1 0 Chordopoxvirus A13L protein DUF1628 PF07790.6 gi|84489358|ref|YP_447590.1| - 5.3 7.8 12.3 1.3 9.8 4.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1628) Sigma_reg_N PF13800.1 gi|84489358|ref|YP_447590.1| - 5.6 7.0 6.9 1.1 9.3 2.4 1.7 1 1 1 2 2 2 0 Sigma factor regulator N-terminal DUF1980 PF09323.5 gi|84489358|ref|YP_447590.1| - 5.8 6.6 10.5 13 5.4 7.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Macoilin PF09726.4 gi|84489358|ref|YP_447590.1| - 5.9 5.0 19.0 6.9 4.8 13.2 1.0 1 0 0 1 1 1 0 Transmembrane protein DUF605 PF04652.11 gi|84489358|ref|YP_447590.1| - 7.9 5.7 22.3 8.8 5.6 15.5 1.0 1 0 0 1 1 1 0 Vta1 like RP-C_C PF11800.3 gi|84489358|ref|YP_447590.1| - 9.4 5.8 12.5 12 5.4 8.7 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region ArgJ PF01960.13 gi|84489359|ref|YP_447591.1| - 2.8e-136 453.9 9.5 3.2e-136 453.7 6.6 1.0 1 0 0 1 1 1 1 ArgJ family AA_kinase PF00696.23 gi|84489360|ref|YP_447592.1| - 6.6e-45 153.5 2.1 7.6e-45 153.3 1.5 1.0 1 0 0 1 1 1 1 Amino acid kinase family RNase_HII PF01351.13 gi|84489361|ref|YP_447593.1| - 6.2e-27 94.5 0.4 1e-26 93.8 0.3 1.4 1 0 0 1 1 1 1 Ribonuclease HII DUF3378 PF11858.3 gi|84489361|ref|YP_447593.1| - 0.00031 20.7 0.2 0.001 19.0 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF3378) DUF561 PF04481.7 gi|84489361|ref|YP_447593.1| - 0.0084 15.0 3.8 0.024 13.5 0.2 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF561) Semialdhyde_dh PF01118.19 gi|84489362|ref|YP_447594.1| - 3.2e-36 124.2 0.0 4.9e-36 123.6 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|84489362|ref|YP_447594.1| - 1.2e-27 96.9 0.0 1.9e-27 96.2 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain NAD_binding_10 PF13460.1 gi|84489362|ref|YP_447594.1| - 0.00057 19.9 0.0 0.0014 18.6 0.0 1.7 2 0 0 2 2 2 1 NADH(P)-binding DapB_N PF01113.15 gi|84489362|ref|YP_447594.1| - 0.00088 19.1 0.0 0.0016 18.3 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Saccharop_dh PF03435.13 gi|84489362|ref|YP_447594.1| - 0.0014 17.6 0.0 0.0019 17.2 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase Flavodoxin_4 PF12682.2 gi|84489363|ref|YP_447595.1| - 6.8e-16 57.9 0.4 3.6e-15 55.6 0.3 1.8 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|84489363|ref|YP_447595.1| - 1.8e-11 44.2 0.1 4.4e-06 26.7 0.0 2.2 2 0 0 2 2 2 2 Flavodoxin domain Flavodoxin_3 PF12641.2 gi|84489363|ref|YP_447595.1| - 1.6e-07 30.8 0.5 0.00037 19.9 0.1 2.1 2 0 0 2 2 2 2 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|84489363|ref|YP_447595.1| - 0.00013 21.9 0.0 0.11 12.4 0.0 2.1 2 0 0 2 2 2 2 Flavodoxin YejG PF13989.1 gi|84489363|ref|YP_447595.1| - 0.014 15.4 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 YejG-like protein Peripla_BP_6 PF13458.1 gi|84489363|ref|YP_447595.1| - 0.017 14.5 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein RmlD_sub_bind PF04321.12 gi|84489363|ref|YP_447595.1| - 0.13 11.1 0.0 0.2 10.4 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Flavodoxin_4 PF12682.2 gi|84489364|ref|YP_447596.1| - 9.2e-14 51.0 0.2 1.7e-13 50.2 0.2 1.5 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|84489364|ref|YP_447596.1| - 2.5e-10 40.5 0.4 8.5e-05 22.5 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_3 PF12641.2 gi|84489364|ref|YP_447596.1| - 7.1e-10 38.5 0.9 0.00019 20.9 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|84489364|ref|YP_447596.1| - 3.1e-05 24.0 0.0 0.00049 20.1 0.0 2.1 1 1 0 1 1 1 1 Flavodoxin FMN_red PF03358.10 gi|84489364|ref|YP_447596.1| - 0.00013 21.4 0.0 0.00015 21.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase CLASP_N PF12348.3 gi|84489364|ref|YP_447596.1| - 0.032 13.5 0.0 0.055 12.8 0.0 1.4 1 0 0 1 1 1 0 CLASP N terminal Invasin_D3 PF09134.5 gi|84489364|ref|YP_447596.1| - 0.056 13.3 1.0 0.36 10.7 0.1 2.1 1 1 1 2 2 2 0 Invasin, domain 3 DUF521 PF04412.8 gi|84489364|ref|YP_447596.1| - 0.062 11.8 0.0 0.062 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF521) Pox_E8 PF03394.8 gi|84489364|ref|YP_447596.1| - 0.085 12.2 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Poxvirus E8 protein Flavodoxin_4 PF12682.2 gi|84489365|ref|YP_447597.1| - 8.2e-15 54.4 0.4 7.6e-14 51.3 0.3 1.9 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|84489365|ref|YP_447597.1| - 2.2e-09 36.9 0.7 1.4e-06 27.7 0.5 2.1 1 1 0 1 1 1 1 Flavodoxin domain FMN_red PF03358.10 gi|84489365|ref|YP_447597.1| - 5.1e-07 29.3 0.0 6.5e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_5 PF12724.2 gi|84489365|ref|YP_447597.1| - 4.6e-06 26.6 0.1 0.017 15.0 0.0 2.2 1 1 0 2 2 2 2 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|84489365|ref|YP_447597.1| - 0.001 19.0 0.0 0.0022 17.9 0.0 1.8 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_4 PF12682.2 gi|84489366|ref|YP_447598.1| - 2.1e-09 36.9 0.0 2.8e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin ANF_receptor PF01094.23 gi|84489366|ref|YP_447598.1| - 0.023 13.5 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region FMN_red PF03358.10 gi|84489366|ref|YP_447598.1| - 0.03 13.8 0.0 0.038 13.5 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase Mur_ligase_M PF08245.7 gi|84489367|ref|YP_447599.1| - 2.2e-23 83.2 6.9 1.4e-22 80.6 2.7 2.6 2 1 0 2 2 2 1 Mur ligase middle domain SecD_SecF PF02355.11 gi|162316922|ref|YP_447600.2| - 2.8e-38 131.0 9.3 4.7e-38 130.2 6.4 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|162316922|ref|YP_447600.2| - 1e-06 27.6 0.1 2.8e-06 26.2 0.1 1.8 1 0 0 1 1 1 1 SecD/SecF GG Motif ACR_tran PF00873.14 gi|162316922|ref|YP_447600.2| - 0.0095 13.4 7.3 0.015 12.7 5.0 1.3 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Patched PF02460.13 gi|162316922|ref|YP_447600.2| - 0.01 13.8 9.2 0.014 13.3 6.4 1.3 1 0 0 1 1 1 0 Patched family MMPL PF03176.10 gi|162316922|ref|YP_447600.2| - 0.25 10.0 16.4 0.57 8.8 11.4 1.5 1 0 0 1 1 1 0 MMPL family TRAP-gamma PF07074.7 gi|162316922|ref|YP_447600.2| - 5.8 6.4 6.9 5.5 6.4 1.4 2.4 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) SecD_SecF PF02355.11 gi|84489369|ref|YP_447601.1| - 1.5e-16 60.1 9.4 1.5e-16 60.1 6.5 1.6 2 0 0 2 2 2 1 Protein export membrane protein Sec_GG PF07549.9 gi|84489369|ref|YP_447601.1| - 3.1e-05 22.9 0.0 7e-05 21.8 0.0 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif DUF2207 PF09972.4 gi|84489369|ref|YP_447601.1| - 0.12 10.9 3.4 0.14 10.6 0.0 2.5 3 0 0 3 3 3 0 Predicted membrane protein (DUF2207) Patched PF02460.13 gi|84489369|ref|YP_447601.1| - 0.65 7.8 7.2 1 7.2 5.0 1.3 1 0 0 1 1 1 0 Patched family DUF137 PF02006.11 gi|84489370|ref|YP_447602.1| - 1e-68 230.2 0.7 1.2e-68 229.9 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 Serpulina_VSP PF05540.6 gi|84489370|ref|YP_447602.1| - 0.0026 16.5 0.3 0.0049 15.7 0.2 1.3 1 0 0 1 1 1 1 Serpulina hyodysenteriae variable surface protein AAA_18 PF13238.1 gi|84489371|ref|YP_447603.1| - 3e-12 46.9 1.1 3e-12 46.9 0.8 2.1 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|84489371|ref|YP_447603.1| - 7.8e-11 42.8 2.1 1.4e-10 41.9 0.6 2.0 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|84489371|ref|YP_447603.1| - 3.2e-06 27.0 1.3 3.2e-06 27.0 0.9 2.1 2 1 0 2 2 2 1 AAA domain ADK PF00406.17 gi|84489371|ref|YP_447603.1| - 0.00031 20.6 0.0 0.00053 19.8 0.0 1.4 1 0 0 1 1 1 1 Adenylate kinase CoaE PF01121.15 gi|84489371|ref|YP_447603.1| - 0.026 13.9 0.1 0.043 13.2 0.1 1.5 1 1 0 1 1 1 0 Dephospho-CoA kinase PRK PF00485.13 gi|84489371|ref|YP_447603.1| - 2.2 7.8 8.7 0.68 9.4 1.4 2.6 2 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family DUF4653 PF15546.1 gi|84489371|ref|YP_447603.1| - 2.3 7.4 9.5 0.26 10.5 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4653) RNA_binding PF01877.12 gi|84489372|ref|YP_447604.1| - 5.8e-07 29.5 0.2 6.4e-07 29.4 0.2 1.0 1 0 0 1 1 1 1 RNA binding ATP_bind_4 PF01902.12 gi|84489373|ref|YP_447605.1| - 1.5e-81 272.9 0.4 1.7e-81 272.7 0.3 1.0 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|84489373|ref|YP_447605.1| - 0.00019 20.8 0.0 0.00032 20.0 0.0 1.6 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC zf-ZPR1 PF03367.8 gi|84489373|ref|YP_447605.1| - 0.004 16.3 0.0 0.01 14.9 0.0 1.6 2 0 0 2 2 2 1 ZPR1 zinc-finger domain MCR_alpha_N PF02745.10 gi|84489373|ref|YP_447605.1| - 0.074 12.2 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain CNP1 PF08750.6 gi|84489374|ref|YP_447606.1| - 0.04 13.6 0.0 0.064 12.9 0.0 1.4 1 0 0 1 1 1 0 CNP1-like family ACT_4 PF13291.1 gi|84489374|ref|YP_447606.1| - 0.047 14.0 3.8 4.5 7.6 0.0 3.1 2 1 2 4 4 4 0 ACT domain DUF4131 PF13567.1 gi|84489374|ref|YP_447606.1| - 0.089 12.1 0.0 0.21 10.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) MFS_2 PF13347.1 gi|84489374|ref|YP_447606.1| - 0.53 8.6 7.8 3.5 5.9 3.0 2.1 2 0 0 2 2 2 0 MFS/sugar transport protein Peptidase_M42 PF05343.9 gi|84489375|ref|YP_447607.1| - 1.1e-103 346.0 4.0 1.2e-103 345.8 2.8 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.23 gi|84489375|ref|YP_447607.1| - 1.4e-07 31.1 0.1 2.5e-07 30.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|84489375|ref|YP_447607.1| - 0.0055 16.4 0.4 0.017 14.8 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 THUMP PF02926.12 gi|84489376|ref|YP_447608.1| - 0.11 12.4 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 THUMP domain DUF524 PF04411.7 gi|84489376|ref|YP_447608.1| - 0.13 12.0 0.2 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF524) DUF1214 PF06742.6 gi|84489376|ref|YP_447608.1| - 2.8 8.4 6.4 5.9 7.4 3.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1214) DUF3595 PF12166.3 gi|84489376|ref|YP_447608.1| - 2.8 6.6 9.1 6.9 5.3 6.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3595) FlgD_ig PF13860.1 gi|84489376|ref|YP_447608.1| - 4.2 7.1 9.7 0.42 10.3 1.0 3.0 2 1 2 4 4 4 0 FlgD Ig-like domain Yip1 PF04893.12 gi|84489377|ref|YP_447609.1| - 2.4e-09 36.9 21.3 3e-09 36.6 14.8 1.1 1 0 0 1 1 1 1 Yip1 domain FMN_red PF03358.10 gi|84489378|ref|YP_447610.1| - 1.1e-15 57.4 0.0 1.2e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489378|ref|YP_447610.1| - 2.3e-14 53.3 0.0 2.8e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.20 gi|84489378|ref|YP_447610.1| - 0.00059 19.8 0.0 0.0089 16.0 0.0 2.0 2 0 0 2 2 2 1 Flavodoxin ComZ PF10815.3 gi|84489379|ref|YP_447611.1| - 0.077 12.7 1.8 0.47 10.2 0.2 2.1 2 0 0 2 2 2 0 ComZ DUF3372 PF11852.3 gi|84489380|ref|YP_447612.1| - 0.062 12.4 0.3 0.2 10.7 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3372) P16-Arc PF04699.9 gi|84489380|ref|YP_447612.1| - 0.11 12.4 0.1 0.47 10.4 0.0 1.8 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) Fer4_16 PF13484.1 gi|84489381|ref|YP_447613.1| - 5.1e-07 30.3 7.9 2e-06 28.4 5.5 2.0 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|84489381|ref|YP_447613.1| - 3.6e-06 26.3 14.0 8.6e-05 21.9 3.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489381|ref|YP_447613.1| - 1.3e-05 24.9 8.6 3.8e-05 23.4 6.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489381|ref|YP_447613.1| - 3.2e-05 24.0 4.9 0.0024 18.0 0.3 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489381|ref|YP_447613.1| - 0.00013 22.3 8.3 0.00038 20.7 5.8 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Dehalogenase PF13486.1 gi|84489381|ref|YP_447613.1| - 0.00017 21.1 0.0 0.00019 20.9 0.0 1.1 1 0 0 1 1 1 1 Reductive dehalogenase subunit Fer4_6 PF12837.2 gi|84489381|ref|YP_447613.1| - 0.00022 20.9 12.0 0.0034 17.1 2.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489381|ref|YP_447613.1| - 0.00037 20.2 5.2 0.016 15.0 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489381|ref|YP_447613.1| - 0.0025 18.1 6.1 0.009 16.3 4.2 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489381|ref|YP_447613.1| - 0.0043 17.4 9.7 0.018 15.4 2.2 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489381|ref|YP_447613.1| - 0.0059 16.6 7.1 0.017 15.1 4.9 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489381|ref|YP_447613.1| - 0.0062 17.0 14.9 0.25 11.9 0.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84489381|ref|YP_447613.1| - 0.023 14.9 8.9 0.26 11.7 1.0 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489381|ref|YP_447613.1| - 0.084 12.8 12.7 0.1 12.5 2.4 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain UvrC_HhH_N PF08459.6 gi|84489382|ref|YP_447614.1| - 8.7e-53 178.0 0.1 5.7e-52 175.3 0.0 2.3 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 gi|84489382|ref|YP_447614.1| - 3.4e-13 49.7 1.8 3.4e-13 49.7 1.3 4.0 5 1 0 5 5 5 1 GIY-YIG catalytic domain HHH_2 PF12826.2 gi|84489382|ref|YP_447614.1| - 5.4e-11 42.2 0.3 2.3e-10 40.1 0.0 2.3 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|84489382|ref|YP_447614.1| - 4.1e-09 36.4 0.0 2.9e-08 33.7 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain UVR PF02151.14 gi|84489382|ref|YP_447614.1| - 4.6e-09 35.4 1.7 1.2e-08 34.1 1.2 1.7 1 0 0 1 1 1 1 UvrB/uvrC motif HHH PF00633.18 gi|84489382|ref|YP_447614.1| - 1.9e-06 27.2 0.0 0.008 15.8 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix motif 5_3_exonuc PF01367.15 gi|84489382|ref|YP_447614.1| - 0.00098 19.3 2.2 0.0021 18.2 0.0 2.5 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold UvrB PF12344.3 gi|84489383|ref|YP_447615.1| - 7e-19 67.0 0.8 2.1e-18 65.5 0.5 1.9 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.26 gi|84489383|ref|YP_447615.1| - 7.8e-16 57.7 0.0 2.3e-15 56.2 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|84489383|ref|YP_447615.1| - 2e-13 50.5 4.2 9.8e-13 48.3 0.0 3.1 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.14 gi|84489383|ref|YP_447615.1| - 2.4e-12 45.9 10.2 1.1e-11 43.7 7.1 2.3 1 0 0 1 1 1 1 UvrB/uvrC motif DEAD PF00270.24 gi|84489383|ref|YP_447615.1| - 1.4e-06 27.9 0.3 0.00013 21.5 0.0 3.4 4 0 0 4 4 4 1 DEAD/DEAH box helicase AAA_30 PF13604.1 gi|84489383|ref|YP_447615.1| - 0.00046 19.8 0.0 0.42 10.1 0.0 3.3 3 0 0 3 3 3 1 AAA domain Kinesin PF00225.18 gi|84489383|ref|YP_447615.1| - 0.0055 15.4 2.5 0.009 14.7 0.0 2.2 2 0 0 2 2 2 1 Kinesin motor domain AAA_19 PF13245.1 gi|84489383|ref|YP_447615.1| - 0.01 15.5 0.0 0.24 11.1 0.0 3.1 4 0 0 4 4 4 0 Part of AAA domain AAA_22 PF13401.1 gi|84489383|ref|YP_447615.1| - 0.023 14.8 0.9 0.22 11.6 0.0 3.0 3 2 0 3 3 3 0 AAA domain HSCB_C PF07743.8 gi|84489383|ref|YP_447615.1| - 1.8 9.0 13.0 1.6 9.2 3.4 3.8 4 0 0 4 4 4 0 HSCB C-terminal oligomerisation domain DUF106 PF01956.11 gi|84489383|ref|YP_447615.1| - 4.2 6.8 5.8 26 4.2 0.1 2.5 2 0 0 2 2 2 0 Integral membrane protein DUF106 DUF148 PF02520.12 gi|84489383|ref|YP_447615.1| - 5.9 6.7 13.3 0.91 9.3 2.4 3.3 3 0 0 3 3 3 0 Domain of unknown function DUF148 ABC_tran PF00005.22 gi|84489384|ref|YP_447616.1| - 3.5e-22 79.1 0.2 1.4e-10 41.6 0.1 4.3 3 1 0 3 3 3 3 ABC transporter SMC_N PF02463.14 gi|84489384|ref|YP_447616.1| - 8.4e-13 48.0 2.2 0.056 12.6 0.0 4.2 3 1 0 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|84489384|ref|YP_447616.1| - 2.2e-08 33.5 0.0 0.0039 16.6 0.0 2.8 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.1 gi|84489384|ref|YP_447616.1| - 3.2e-07 30.6 18.5 0.00094 19.2 0.0 4.9 5 1 0 5 5 5 2 AAA domain DnaJ_CXXCXGXG PF00684.14 gi|84489384|ref|YP_447616.1| - 8e-07 29.0 2.8 0.0086 16.1 0.4 3.5 3 0 0 3 3 3 1 DnaJ central domain AAA_16 PF13191.1 gi|84489384|ref|YP_447616.1| - 3e-06 27.3 2.8 0.011 15.7 0.1 3.1 3 1 0 3 3 2 2 AAA ATPase domain DUF258 PF03193.11 gi|84489384|ref|YP_447616.1| - 3.4e-06 26.3 0.2 0.037 13.2 0.1 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|84489384|ref|YP_447616.1| - 4.2e-06 26.9 6.6 0.11 12.5 0.1 4.9 5 0 0 5 5 5 2 AAA domain AAA_25 PF13481.1 gi|84489384|ref|YP_447616.1| - 9.6e-06 25.1 0.0 0.034 13.5 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|84489384|ref|YP_447616.1| - 1.4e-05 25.0 0.3 0.2 11.5 0.0 3.8 4 0 0 4 4 3 2 AAA domain BCA_ABC_TP_C PF12399.3 gi|84489384|ref|YP_447616.1| - 1.4e-05 24.6 2.1 0.13 11.9 0.2 2.9 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter AAA_17 PF13207.1 gi|84489384|ref|YP_447616.1| - 1.6e-05 25.6 8.0 0.0083 16.9 0.1 4.0 4 0 0 4 4 3 2 AAA domain AAA_18 PF13238.1 gi|84489384|ref|YP_447616.1| - 2.1e-05 24.8 2.4 0.032 14.5 0.1 3.6 3 0 0 3 3 2 2 AAA domain AAA_23 PF13476.1 gi|84489384|ref|YP_447616.1| - 2.7e-05 24.5 11.7 0.031 14.5 0.2 3.9 4 0 0 4 4 4 2 AAA domain AAA_10 PF12846.2 gi|84489384|ref|YP_447616.1| - 5.3e-05 22.8 0.2 0.021 14.2 0.0 2.7 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|84489384|ref|YP_447616.1| - 0.00013 21.8 2.6 0.43 10.4 0.1 3.8 5 0 0 5 5 3 2 AAA domain AAA_19 PF13245.1 gi|84489384|ref|YP_447616.1| - 0.0002 21.0 0.0 0.19 11.4 0.0 3.2 2 0 0 2 2 2 1 Part of AAA domain KaiC PF06745.8 gi|84489384|ref|YP_447616.1| - 0.00023 20.3 1.3 0.25 10.4 0.0 3.0 3 0 0 3 3 3 2 KaiC zf-RING_3 PF14369.1 gi|84489384|ref|YP_447616.1| - 0.00091 19.1 4.7 2 8.4 0.0 4.4 4 0 0 4 4 4 1 zinc-finger APS_kinase PF01583.15 gi|84489384|ref|YP_447616.1| - 0.0011 18.6 0.1 1.3 8.7 0.0 2.7 2 0 0 2 2 2 1 Adenylylsulphate kinase MMR_HSR1 PF01926.18 gi|84489384|ref|YP_447616.1| - 0.0018 18.2 5.0 0.065 13.1 0.0 3.9 3 1 0 3 3 3 1 50S ribosome-binding GTPase NACHT PF05729.7 gi|84489384|ref|YP_447616.1| - 0.002 17.7 0.1 0.19 11.3 0.1 2.3 2 0 0 2 2 2 1 NACHT domain Arch_ATPase PF01637.13 gi|84489384|ref|YP_447616.1| - 0.0024 17.6 2.4 0.94 9.1 0.3 3.6 2 1 0 2 2 2 1 Archaeal ATPase DUF2075 PF09848.4 gi|84489384|ref|YP_447616.1| - 0.0063 15.5 0.1 1.2 8.0 0.1 2.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) cobW PF02492.14 gi|84489384|ref|YP_447616.1| - 0.0069 15.8 0.2 0.37 10.2 0.1 2.5 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RNA12 PF10443.4 gi|84489384|ref|YP_447616.1| - 0.0074 14.8 0.0 2.1 6.7 0.0 2.2 2 0 0 2 2 2 1 RNA12 protein MobB PF03205.9 gi|84489384|ref|YP_447616.1| - 0.008 15.8 2.2 0.68 9.6 0.2 3.5 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B Viral_helicase1 PF01443.13 gi|84489384|ref|YP_447616.1| - 0.0096 15.4 0.2 0.18 11.2 0.2 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Miro PF08477.8 gi|84489384|ref|YP_447616.1| - 0.012 16.1 1.5 3 8.3 0.1 3.3 3 0 0 3 3 2 0 Miro-like protein ArgK PF03308.11 gi|84489384|ref|YP_447616.1| - 0.017 13.9 0.0 0.4 9.4 0.0 2.3 2 0 0 2 2 2 0 ArgK protein NTPase_1 PF03266.10 gi|84489384|ref|YP_447616.1| - 0.017 14.8 1.7 0.34 10.6 0.1 3.1 3 0 0 3 3 2 0 NTPase AAA_28 PF13521.1 gi|84489384|ref|YP_447616.1| - 0.026 14.5 0.3 5.2 7.0 0.2 3.1 3 0 0 3 3 3 0 AAA domain AAA_30 PF13604.1 gi|84489384|ref|YP_447616.1| - 0.026 14.1 0.0 15 5.1 0.0 3.1 4 0 0 4 4 3 0 AAA domain T2SE PF00437.15 gi|84489384|ref|YP_447616.1| - 0.028 13.3 0.9 1.2 7.9 0.0 2.6 3 0 0 3 3 2 0 Type II/IV secretion system protein Zn-ribbon_8 PF09723.5 gi|84489384|ref|YP_447616.1| - 0.03 14.2 9.1 0.39 10.7 0.1 4.2 4 0 0 4 4 4 0 Zinc ribbon domain RNA_helicase PF00910.17 gi|84489384|ref|YP_447616.1| - 0.045 13.9 0.2 3.5 7.8 0.1 2.8 2 0 0 2 2 2 0 RNA helicase PRK PF00485.13 gi|84489384|ref|YP_447616.1| - 0.048 13.2 0.1 2.6 7.5 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family SbcCD_C PF13558.1 gi|84489384|ref|YP_447616.1| - 0.061 13.2 0.1 34 4.4 0.0 3.7 4 1 0 4 4 3 0 Putative exonuclease SbcCD, C subunit Sigma54_activat PF00158.21 gi|84489384|ref|YP_447616.1| - 0.081 12.3 0.0 2.2 7.7 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|84489384|ref|YP_447616.1| - 0.13 11.6 0.5 33 3.8 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein YhfH PF14149.1 gi|84489384|ref|YP_447616.1| - 0.58 9.9 3.0 2.8 7.7 0.0 3.5 4 0 0 4 4 3 0 YhfH-like protein DUF87 PF01935.12 gi|84489384|ref|YP_447616.1| - 0.75 9.5 5.9 1.3 8.8 0.0 3.8 5 0 0 5 5 4 0 Domain of unknown function DUF87 Lactamase_B_2 PF12706.2 gi|84489385|ref|YP_447617.1| - 1.6e-19 70.2 0.5 1.9e-19 69.9 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|84489385|ref|YP_447617.1| - 2.9e-16 59.6 0.2 4.2e-16 59.0 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|84489385|ref|YP_447617.1| - 1.8e-07 30.9 2.3 3e-07 30.2 1.6 1.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily DHquinase_I PF01487.10 gi|84489386|ref|YP_447618.1| - 5.8e-54 183.1 0.5 6.5e-54 182.9 0.3 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HEPN PF05168.9 gi|84489386|ref|YP_447618.1| - 0.29 11.0 1.5 0.95 9.3 0.2 2.2 1 1 0 2 2 2 0 HEPN domain Chorismate_synt PF01264.16 gi|84489388|ref|YP_447620.1| - 7.3e-139 462.0 1.9 8.2e-139 461.9 1.3 1.0 1 0 0 1 1 1 1 Chorismate synthase GATase_3 PF07685.9 gi|84489389|ref|YP_447621.1| - 7.6e-29 100.3 0.0 9.9e-29 99.9 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|84489389|ref|YP_447621.1| - 0.00058 19.3 0.0 0.00073 19.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.19 gi|84489389|ref|YP_447621.1| - 0.16 11.3 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family DUF1727 PF08353.5 gi|84489390|ref|YP_447622.1| - 2.1e-33 114.2 0.7 4.4e-33 113.2 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1727) Mur_ligase_M PF08245.7 gi|84489390|ref|YP_447622.1| - 6.3e-23 81.7 0.2 2.2e-21 76.7 0.2 2.4 1 1 0 1 1 1 1 Mur ligase middle domain Zn_Tnp_IS1595 PF12760.2 gi|84489390|ref|YP_447622.1| - 0.063 13.0 1.8 0.1 12.4 1.2 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Cyc-maltodext_C PF10438.4 gi|84489390|ref|YP_447622.1| - 1.9 8.5 5.2 2.1 8.4 0.1 3.4 4 1 1 5 5 5 0 Cyclo-malto-dextrinase C-terminal domain CoA_binding PF02629.14 gi|84489392|ref|YP_447624.1| - 1.9e-27 95.5 4.4 3.5e-25 88.3 1.0 2.5 2 0 0 2 2 2 2 CoA binding domain Ligase_CoA PF00549.14 gi|84489392|ref|YP_447624.1| - 2.1e-15 56.6 0.4 4.2e-15 55.6 0.3 1.5 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.1 gi|84489392|ref|YP_447624.1| - 5.5e-09 35.7 0.0 9.1e-09 35.0 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|84489392|ref|YP_447624.1| - 5.4e-06 26.5 0.1 4.4e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 CoA binding domain DUF2325 PF10087.4 gi|84489392|ref|YP_447624.1| - 0.089 12.6 0.0 0.7 9.7 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) HMG-CoA_red PF00368.13 gi|84489393|ref|YP_447625.1| - 1.8e-146 487.6 5.5 2e-146 487.4 3.8 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase ERAP1_C PF11838.3 gi|84489393|ref|YP_447625.1| - 0.02 14.1 0.0 0.032 13.4 0.0 1.3 1 0 0 1 1 1 0 ERAP1-like C-terminal domain CcdA PF07362.7 gi|84489393|ref|YP_447625.1| - 0.059 13.2 0.4 0.28 11.0 0.1 2.2 1 1 1 2 2 2 0 Post-segregation antitoxin CcdA VIT1 PF01988.14 gi|84489394|ref|YP_447626.1| - 2.2e-29 102.4 18.9 1.6e-28 99.6 13.1 1.9 1 1 0 1 1 1 1 VIT family CybS PF05328.7 gi|84489394|ref|YP_447626.1| - 2.5 7.7 5.0 2.8 7.5 0.1 2.4 2 1 0 2 2 2 0 CybS UPF0016 PF01169.14 gi|84489394|ref|YP_447626.1| - 9.2 6.4 9.5 4.2 7.5 1.7 2.5 2 1 0 2 2 2 0 Uncharacterized protein family UPF0016 FCP1_C PF09309.5 gi|84489395|ref|YP_447627.1| - 0.082 12.2 0.2 0.082 12.2 0.1 1.1 1 0 0 1 1 1 0 FCP1, C-terminal DUF4064 PF13273.1 gi|84489396|ref|YP_447628.1| - 0.00013 21.9 19.2 0.024 14.7 9.8 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF4064) ECF-ribofla_trS PF07155.7 gi|84489396|ref|YP_447628.1| - 0.1 12.3 12.2 0.049 13.3 6.9 1.5 2 0 0 2 2 2 0 ECF-type riboflavin transporter, S component ATG22 PF11700.3 gi|84489396|ref|YP_447628.1| - 2.5 6.4 10.7 4.2 5.7 7.4 1.4 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like PALP PF00291.20 gi|84489397|ref|YP_447629.1| - 2.9e-67 227.0 1.3 3.4e-67 226.8 0.9 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme AAA_18 PF13238.1 gi|84489398|ref|YP_447630.1| - 1.1e-23 83.9 0.5 1.5e-23 83.5 0.1 1.4 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.1 gi|84489398|ref|YP_447630.1| - 1.3e-13 51.8 0.1 2.4e-13 50.9 0.0 1.5 1 1 1 2 2 1 1 AAA domain AAA PF00004.24 gi|84489398|ref|YP_447630.1| - 8.6e-05 22.7 0.1 0.00018 21.7 0.1 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|84489398|ref|YP_447630.1| - 0.00013 21.8 0.0 0.2 11.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.1 gi|84489398|ref|YP_447630.1| - 0.00024 21.1 0.3 0.00039 20.4 0.2 1.3 1 0 0 1 1 1 1 AAA domain ADK PF00406.17 gi|84489398|ref|YP_447630.1| - 0.00035 20.4 0.5 0.22 11.4 0.0 2.8 1 1 2 3 3 3 1 Adenylate kinase SKI PF01202.17 gi|84489398|ref|YP_447630.1| - 0.0007 19.5 0.0 0.32 10.8 0.0 2.1 2 0 0 2 2 2 1 Shikimate kinase KTI12 PF08433.5 gi|84489398|ref|YP_447630.1| - 0.00073 18.8 0.0 0.0012 18.0 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Thymidylate_kin PF02223.12 gi|84489398|ref|YP_447630.1| - 0.00074 18.9 0.1 0.075 12.4 0.1 2.1 2 0 0 2 2 2 1 Thymidylate kinase NTPase_1 PF03266.10 gi|84489398|ref|YP_447630.1| - 0.0011 18.6 0.8 0.002 17.8 0.2 1.7 2 0 0 2 2 2 1 NTPase AAA_22 PF13401.1 gi|84489398|ref|YP_447630.1| - 0.0012 19.0 0.2 0.0025 17.9 0.0 1.7 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|84489398|ref|YP_447630.1| - 0.0018 17.9 0.7 0.0032 17.1 0.5 1.3 1 0 0 1 1 1 1 Part of AAA domain T2SE PF00437.15 gi|84489398|ref|YP_447630.1| - 0.0034 16.3 1.6 0.0055 15.6 1.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein RNA_helicase PF00910.17 gi|84489398|ref|YP_447630.1| - 0.004 17.2 0.1 0.036 14.2 0.0 2.1 2 0 0 2 2 2 1 RNA helicase AAA_5 PF07728.9 gi|84489398|ref|YP_447630.1| - 0.0054 16.4 0.1 0.02 14.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) MobB PF03205.9 gi|84489398|ref|YP_447630.1| - 0.011 15.5 1.4 0.051 13.2 1.0 2.0 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|84489398|ref|YP_447630.1| - 0.013 14.6 0.3 0.028 13.5 0.1 1.5 2 0 0 2 2 2 0 Zeta toxin RuvB_N PF05496.7 gi|84489398|ref|YP_447630.1| - 0.016 14.2 0.1 0.027 13.5 0.1 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus APS_kinase PF01583.15 gi|84489398|ref|YP_447630.1| - 0.017 14.7 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Adenylylsulphate kinase DUF2075 PF09848.4 gi|84489398|ref|YP_447630.1| - 0.021 13.8 0.0 0.023 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.1 gi|84489398|ref|YP_447630.1| - 0.031 14.2 0.0 0.063 13.2 0.0 1.5 2 0 0 2 2 2 0 AAA ATPase domain AAA_11 PF13086.1 gi|84489398|ref|YP_447630.1| - 0.045 13.3 0.0 0.054 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|84489398|ref|YP_447630.1| - 0.046 13.2 0.0 0.058 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|84489398|ref|YP_447630.1| - 0.049 13.2 0.1 0.083 12.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|84489398|ref|YP_447630.1| - 0.054 13.0 0.0 0.085 12.3 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.1 gi|84489398|ref|YP_447630.1| - 0.066 13.1 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 AAA domain CoaE PF01121.15 gi|84489398|ref|YP_447630.1| - 0.11 11.8 0.2 1 8.7 0.1 2.1 2 0 0 2 2 2 0 Dephospho-CoA kinase AAA_3 PF07726.6 gi|84489398|ref|YP_447630.1| - 0.11 12.0 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Cytidylate_kin2 PF13189.1 gi|84489398|ref|YP_447630.1| - 0.14 12.0 0.2 0.53 10.1 0.1 2.0 1 1 0 1 1 1 0 Cytidylate kinase-like family ABC_tran PF00005.22 gi|84489398|ref|YP_447630.1| - 0.87 9.8 2.8 1.3 9.3 1.9 1.7 1 1 0 1 1 1 0 ABC transporter CarboxypepD_reg PF13620.1 gi|84489399|ref|YP_447631.1| - 1.8e-97 319.4 189.8 2.2e-05 24.4 1.0 26.2 27 0 0 27 27 27 24 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|84489399|ref|YP_447631.1| - 2.3e-59 197.4 264.9 6.8e-05 22.8 2.0 26.6 25 3 1 26 26 26 24 Domain of unknown function (DUF4480) Big_1 PF02369.11 gi|84489399|ref|YP_447631.1| - 2.6e-45 152.3 266.1 0.0025 17.6 0.3 28.7 28 1 2 30 30 30 25 Bacterial Ig-like domain (group 1) phage_tail_N PF08400.5 gi|84489399|ref|YP_447631.1| - 2e-12 47.0 94.0 0.22 11.2 0.4 22.1 22 0 0 22 22 22 9 Prophage tail fibre N-terminal Dioxygenase_C PF00775.16 gi|84489399|ref|YP_447631.1| - 2.6e-09 36.6 29.8 1.4 8.1 0.0 17.5 20 1 0 21 21 21 3 Dioxygenase SWM_repeat PF13753.1 gi|84489399|ref|YP_447631.1| - 2.5e-05 23.5 43.2 4.2e-05 22.7 10.1 17.2 2 1 13 17 17 17 9 Putative flagellar system-associated repeat Filamin PF00630.14 gi|84489399|ref|YP_447631.1| - 4.5e-05 23.9 0.5 4.5e-05 23.9 0.4 20.2 10 5 6 16 16 16 7 Filamin/ABP280 repeat Sex_peptide PF08138.6 gi|84489399|ref|YP_447631.1| - 0.59 10.0 0.1 1.5 8.7 0.1 1.6 1 0 0 1 1 1 0 Sex peptide (SP) family Pro_CA PF00484.14 gi|84489400|ref|YP_447632.1| - 3.6e-21 75.7 0.0 4.2e-21 75.5 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Rpr2 PF04032.11 gi|84489401|ref|YP_447633.1| - 4.9e-19 67.9 0.3 5.9e-19 67.7 0.2 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DZR PF12773.2 gi|84489401|ref|YP_447633.1| - 0.014 15.1 0.2 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489401|ref|YP_447633.1| - 0.017 14.2 0.6 0.046 12.9 0.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489401|ref|YP_447633.1| - 0.02 14.3 0.1 0.036 13.5 0.1 1.4 1 1 0 1 1 1 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|84489401|ref|YP_447633.1| - 0.35 10.5 2.8 4.8 6.9 0.4 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit CRS1_YhbY PF01985.16 gi|84489402|ref|YP_447634.1| - 6.5e-22 77.3 2.4 7.2e-22 77.1 1.6 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Pox_G5 PF04599.7 gi|84489402|ref|YP_447634.1| - 0.0035 16.0 2.2 0.0038 15.9 1.5 1.0 1 0 0 1 1 1 1 Poxvirus G5 protein Viral_Beta_CD PF04530.7 gi|84489402|ref|YP_447634.1| - 0.032 14.4 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Viral Beta C/D like family Ribosomal_S19e PF01090.14 gi|84489403|ref|YP_447635.1| - 2.2e-58 195.6 0.0 2.5e-58 195.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.8 gi|84489403|ref|YP_447635.1| - 0.019 14.6 0.0 1.2 8.8 0.0 2.2 2 0 0 2 2 2 0 Holliday junction DNA helicase ruvB C-terminus GntR PF00392.16 gi|84489403|ref|YP_447635.1| - 0.13 11.7 0.0 0.26 10.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family dsDNA_bind PF01984.15 gi|84489404|ref|YP_447636.1| - 1.1e-26 92.8 27.0 1.8e-26 92.2 18.7 1.3 1 1 0 1 1 1 1 Double-stranded DNA-binding domain DUF1684 PF07920.6 gi|84489404|ref|YP_447636.1| - 0.099 12.4 0.7 0.16 11.8 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1684) SDA1 PF05285.7 gi|84489404|ref|YP_447636.1| - 0.18 11.0 11.1 0.19 10.9 7.7 1.1 1 0 0 1 1 1 0 SDA1 HTH_29 PF13551.1 gi|84489404|ref|YP_447636.1| - 0.2 11.7 5.0 0.065 13.3 1.4 1.6 1 1 1 2 2 2 0 Winged helix-turn helix APC_CDC26 PF10471.4 gi|84489404|ref|YP_447636.1| - 1 10.1 13.1 0.37 11.5 7.2 1.7 2 0 0 2 2 2 0 Anaphase-promoting complex APC subunit 1 SPAN-X PF07458.7 gi|84489404|ref|YP_447636.1| - 1.9 8.8 5.6 3.7 7.8 3.9 1.5 1 0 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome SMC_N PF02463.14 gi|84489404|ref|YP_447636.1| - 2.1 7.5 4.3 2.7 7.1 3.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF4610 PF15384.1 gi|84489404|ref|YP_447636.1| - 3.4 7.1 6.0 10 5.5 4.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4610) DUF4578 PF15147.1 gi|84489404|ref|YP_447636.1| - 9.1 6.6 8.4 17 5.7 4.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4578) Asn_synthase PF00733.16 gi|84489405|ref|YP_447637.1| - 2.1e-06 27.4 0.0 2.6e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|84489405|ref|YP_447637.1| - 9.1e-05 21.8 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Peptidase_C39 PF03412.10 gi|84489405|ref|YP_447637.1| - 0.012 15.3 0.0 0.026 14.3 0.0 1.5 1 1 0 1 1 1 0 Peptidase C39 family tRNA_Me_trans PF03054.11 gi|84489405|ref|YP_447637.1| - 0.028 13.0 0.1 0.054 12.0 0.0 1.6 1 1 0 1 1 1 0 tRNA methyl transferase ATP_bind_3 PF01171.15 gi|84489405|ref|YP_447637.1| - 0.035 13.6 0.0 0.057 12.9 0.0 1.5 1 1 0 1 1 1 0 PP-loop family ATP_bind_4 PF01902.12 gi|84489405|ref|YP_447637.1| - 0.035 13.4 0.0 0.057 12.7 0.0 1.4 1 0 0 1 1 1 0 ATP-binding region Ribosomal_L31e PF01198.14 gi|84489406|ref|YP_447638.1| - 1.7e-27 94.9 4.1 1.9e-27 94.7 2.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e DUF2458 PF10454.4 gi|84489406|ref|YP_447638.1| - 0.012 15.5 1.3 0.03 14.2 0.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2458) BEN PF10523.4 gi|84489406|ref|YP_447638.1| - 0.097 12.7 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 BEN domain eIF-6 PF01912.13 gi|84489407|ref|YP_447639.1| - 3.5e-71 238.4 4.4 4.3e-71 238.1 3.1 1.2 1 0 0 1 1 1 1 eIF-6 family PrpR_N PF06506.6 gi|84489407|ref|YP_447639.1| - 0.0089 15.4 0.2 0.38 10.1 0.1 2.2 2 0 0 2 2 2 2 Propionate catabolism activator Ribosomal_L18ae PF01775.12 gi|84489408|ref|YP_447640.1| - 1.4e-08 34.6 0.0 2.6e-08 33.7 0.0 1.4 1 1 0 1 1 1 1 Ribosomal L18ae/LX protein domain Thg1C PF14413.1 gi|84489408|ref|YP_447640.1| - 0.064 12.9 0.1 0.091 12.4 0.0 1.3 1 1 0 1 1 1 0 Thg1 C terminal domain Prefoldin PF02996.12 gi|84489409|ref|YP_447641.1| - 1.8e-20 72.7 6.7 1.8e-20 72.7 4.6 1.5 1 1 1 2 2 2 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|84489409|ref|YP_447641.1| - 1.3e-05 24.9 17.9 0.0076 15.9 4.0 2.1 1 1 1 2 2 2 2 Prefoldin subunit TPR_MLP1_2 PF07926.7 gi|84489409|ref|YP_447641.1| - 0.00018 21.2 0.6 0.0003 20.5 0.3 1.5 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein XhlA PF10779.4 gi|84489409|ref|YP_447641.1| - 0.0013 18.5 10.2 0.01 15.7 1.8 2.2 2 0 0 2 2 2 1 Haemolysin XhlA Baculo_PEP_C PF04513.7 gi|84489409|ref|YP_447641.1| - 0.0031 17.3 5.0 0.15 11.8 1.3 2.1 2 0 0 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus BAR PF03114.13 gi|84489409|ref|YP_447641.1| - 0.0096 15.4 1.0 0.79 9.1 0.1 2.0 2 0 0 2 2 2 1 BAR domain DUF1341 PF07071.6 gi|84489409|ref|YP_447641.1| - 0.012 15.2 0.4 0.014 14.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1341) Syntaxin PF00804.20 gi|84489409|ref|YP_447641.1| - 0.013 15.6 13.5 0.023 14.8 7.6 2.0 1 1 1 2 2 2 0 Syntaxin Uds1 PF15456.1 gi|84489409|ref|YP_447641.1| - 0.014 15.3 1.4 0.02 14.8 1.0 1.2 1 0 0 1 1 1 0 Up-regulated During Septation GOLGA2L5 PF15070.1 gi|84489409|ref|YP_447641.1| - 0.015 13.8 9.1 0.053 12.0 0.5 2.0 2 0 0 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 Filament PF00038.16 gi|84489409|ref|YP_447641.1| - 0.019 14.4 11.9 0.021 14.3 0.9 2.0 2 0 0 2 2 2 0 Intermediate filament protein EAP30 PF04157.11 gi|84489409|ref|YP_447641.1| - 0.024 13.7 4.9 0.61 9.2 0.3 2.1 2 0 0 2 2 2 0 EAP30/Vps36 family Taxilin PF09728.4 gi|84489409|ref|YP_447641.1| - 0.026 13.6 10.2 0.16 10.9 0.7 2.0 2 0 0 2 2 2 0 Myosin-like coiled-coil protein DUF3251 PF11622.3 gi|84489409|ref|YP_447641.1| - 0.037 13.4 1.3 0.037 13.4 0.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3251) NPV_P10 PF05531.7 gi|84489409|ref|YP_447641.1| - 0.038 14.2 8.0 0.28 11.4 2.8 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FlxA PF14282.1 gi|84489409|ref|YP_447641.1| - 0.04 13.8 19.0 0.19 11.6 1.7 2.3 2 0 0 2 2 2 0 FlxA-like protein FliD_N PF02465.13 gi|84489409|ref|YP_447641.1| - 0.042 14.2 4.6 0.084 13.2 0.4 2.1 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Snapin_Pallidin PF14712.1 gi|84489409|ref|YP_447641.1| - 0.05 13.9 12.6 0.06 13.6 2.6 2.1 2 0 0 2 2 2 0 Snapin/Pallidin SelA PF03841.8 gi|84489409|ref|YP_447641.1| - 0.059 12.1 1.6 0.067 11.9 1.1 1.2 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Seryl_tRNA_N PF02403.17 gi|84489409|ref|YP_447641.1| - 0.063 13.2 12.1 0.21 11.6 2.6 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Med10 PF09748.4 gi|84489409|ref|YP_447641.1| - 0.065 13.0 2.5 0.31 10.8 0.2 2.1 2 0 0 2 2 2 0 Transcription factor subunit Med10 of Mediator complex DivIVA PF05103.8 gi|84489409|ref|YP_447641.1| - 0.071 13.1 8.7 0.11 12.5 1.0 2.1 2 0 0 2 2 2 0 DivIVA protein DUF2205 PF10224.4 gi|84489409|ref|YP_447641.1| - 0.076 12.5 11.1 0.73 9.4 1.2 2.3 2 0 0 2 2 2 0 Predicted coiled-coil protein (DUF2205) Tektin PF03148.9 gi|84489409|ref|YP_447641.1| - 0.077 11.5 7.8 0.45 9.0 0.4 2.1 2 0 0 2 2 2 0 Tektin family Talin_middle PF09141.5 gi|84489409|ref|YP_447641.1| - 0.083 12.5 3.0 0.51 10.0 0.1 2.1 1 1 0 2 2 2 0 Talin, middle domain Phage_GP20 PF06810.6 gi|84489409|ref|YP_447641.1| - 0.092 12.1 11.6 0.13 11.7 3.4 2.1 2 0 0 2 2 2 0 Phage minor structural protein GP20 DUF972 PF06156.8 gi|84489409|ref|YP_447641.1| - 0.11 12.8 5.4 0.41 11.0 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF972) CENP-Q PF13094.1 gi|84489409|ref|YP_447641.1| - 0.13 12.3 9.4 1.3 9.0 1.5 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF948 PF06103.6 gi|84489409|ref|YP_447641.1| - 0.14 12.0 7.3 3.2 7.6 0.2 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.3 gi|84489409|ref|YP_447641.1| - 0.14 11.3 11.1 0.76 8.9 3.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) ADIP PF11559.3 gi|84489409|ref|YP_447641.1| - 0.14 12.0 11.9 0.45 10.4 0.6 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding AIP3 PF03915.8 gi|84489409|ref|YP_447641.1| - 0.19 10.6 9.6 0.28 10.0 0.5 2.0 1 1 1 2 2 2 0 Actin interacting protein 3 HAUS-augmin3 PF14932.1 gi|84489409|ref|YP_447641.1| - 0.2 10.8 9.8 0.35 9.9 0.3 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 Sigma70_ner PF04546.8 gi|84489409|ref|YP_447641.1| - 0.22 11.1 5.5 0.12 11.9 1.9 1.8 1 1 0 1 1 1 0 Sigma-70, non-essential region RRF_GI PF12614.3 gi|84489409|ref|YP_447641.1| - 0.22 11.3 3.1 1.2 8.9 0.1 2.1 2 0 0 2 2 2 0 Ribosome recycling factor Syntaxin-6_N PF09177.6 gi|84489409|ref|YP_447641.1| - 0.22 11.9 6.9 4.1 7.8 0.6 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal CENP-F_leu_zip PF10473.4 gi|84489409|ref|YP_447641.1| - 0.22 11.3 13.4 0.41 10.4 1.9 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cob_adeno_trans PF01923.13 gi|84489409|ref|YP_447641.1| - 0.23 11.2 3.7 0.51 10.1 0.1 2.0 2 0 0 2 2 2 0 Cobalamin adenosyltransferase TBPIP PF07106.8 gi|84489409|ref|YP_447641.1| - 0.24 10.9 11.6 0.4 10.1 1.9 2.1 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) APG17 PF04108.7 gi|84489409|ref|YP_447641.1| - 0.25 10.0 5.1 3.3 6.3 0.4 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 Spc7 PF08317.6 gi|84489409|ref|YP_447641.1| - 0.25 9.9 13.6 0.52 8.9 3.1 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Laminin_II PF06009.7 gi|84489409|ref|YP_447641.1| - 0.26 11.0 8.7 2.5 7.8 1.6 2.1 2 0 0 2 2 2 0 Laminin Domain II DUF812 PF05667.6 gi|84489409|ref|YP_447641.1| - 0.28 9.6 10.8 0.39 9.1 2.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF812) DASH_Dad4 PF08650.5 gi|84489409|ref|YP_447641.1| - 0.29 11.0 3.0 3.3 7.6 0.0 2.8 2 1 1 3 3 3 0 DASH complex subunit Dad4 AAA_13 PF13166.1 gi|84489409|ref|YP_447641.1| - 0.3 9.4 10.1 0.94 7.8 1.9 2.0 2 0 0 2 2 2 0 AAA domain COG5 PF10392.4 gi|84489409|ref|YP_447641.1| - 0.31 11.0 3.4 2.9 7.8 0.1 2.1 2 0 0 2 2 2 0 Golgi transport complex subunit 5 HrpB7 PF09486.5 gi|84489409|ref|YP_447641.1| - 0.42 10.5 3.8 0.41 10.5 0.2 2.0 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF4446 PF14584.1 gi|84489409|ref|YP_447641.1| - 0.47 10.2 6.4 5.9 6.6 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) BLOC1_2 PF10046.4 gi|84489409|ref|YP_447641.1| - 0.5 10.5 10.5 0.41 10.8 2.6 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mod_r PF07200.8 gi|84489409|ref|YP_447641.1| - 0.58 10.0 9.6 0.58 10.0 1.5 2.1 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Sec20 PF03908.8 gi|84489409|ref|YP_447641.1| - 0.59 9.8 3.5 1.7 8.4 0.2 2.3 2 1 1 3 3 3 0 Sec20 Flagellar_rod PF05149.7 gi|84489409|ref|YP_447641.1| - 0.62 9.2 12.5 0.56 9.3 1.1 2.0 2 0 0 2 2 2 0 Paraflagellar rod protein Fib_alpha PF08702.5 gi|84489409|ref|YP_447641.1| - 0.68 10.0 9.3 1.2 9.2 2.2 2.2 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Apc4 PF12896.2 gi|84489409|ref|YP_447641.1| - 0.69 9.1 4.3 2.5 7.3 0.1 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 Occludin_ELL PF07303.8 gi|84489409|ref|YP_447641.1| - 0.7 10.6 5.7 2.3 8.9 0.4 2.1 2 0 0 2 2 2 0 Occludin homology domain FlaC_arch PF05377.6 gi|84489409|ref|YP_447641.1| - 0.72 9.7 9.2 0.14 12.0 1.0 2.5 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) TipAS PF07739.8 gi|84489409|ref|YP_447641.1| - 0.72 10.1 4.0 5.8 7.2 0.2 2.1 2 0 0 2 2 2 0 TipAS antibiotic-recognition domain COG2 PF06148.6 gi|84489409|ref|YP_447641.1| - 0.73 9.7 7.1 5.4 6.8 0.7 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Matrilin_ccoil PF10393.4 gi|84489409|ref|YP_447641.1| - 0.75 9.2 8.5 0.53 9.6 1.7 2.7 2 1 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Atg14 PF10186.4 gi|84489409|ref|YP_447641.1| - 0.76 8.6 10.6 1.4 7.7 0.6 2.0 2 0 0 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 RmuC PF02646.11 gi|84489409|ref|YP_447641.1| - 0.76 8.5 8.3 1 8.1 0.6 2.1 2 0 0 2 2 2 0 RmuC family IncA PF04156.9 gi|84489409|ref|YP_447641.1| - 0.79 9.2 12.7 1.6 8.2 1.2 2.1 2 0 0 2 2 2 0 IncA protein FemAB PF02388.11 gi|84489409|ref|YP_447641.1| - 0.8 8.3 10.1 0.068 11.8 0.9 2.0 1 1 1 2 2 2 0 FemAB family DUF4200 PF13863.1 gi|84489409|ref|YP_447641.1| - 0.83 9.6 14.0 1.6 8.6 1.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) GCN5L1 PF06320.8 gi|84489409|ref|YP_447641.1| - 0.85 9.4 5.6 1.6 8.5 0.3 2.1 2 0 0 2 2 2 0 GCN5-like protein 1 (GCN5L1) LOH1CR12 PF10158.4 gi|84489409|ref|YP_447641.1| - 0.9 9.3 4.7 5.7 6.7 0.6 2.1 2 0 0 2 2 2 0 Tumour suppressor protein Tnp_P_element PF12017.3 gi|84489409|ref|YP_447641.1| - 0.92 8.6 5.8 0.3 10.2 0.5 2.0 2 0 0 2 2 2 0 Transposase protein PRP1_N PF06424.7 gi|84489409|ref|YP_447641.1| - 1 9.6 5.9 1.4 9.2 0.5 2.1 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal FliE PF02049.13 gi|84489409|ref|YP_447641.1| - 1.1 9.3 7.8 0.94 9.5 1.8 2.1 2 0 0 2 2 2 0 Flagellar hook-basal body complex protein FliE DUF1664 PF07889.7 gi|84489409|ref|YP_447641.1| - 1.1 9.1 8.8 5 6.9 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) GAS PF13851.1 gi|84489409|ref|YP_447641.1| - 1.1 8.4 12.6 0.25 10.5 1.4 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF2120 PF09893.4 gi|84489409|ref|YP_447641.1| - 1.1 9.2 3.6 1.9 8.4 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) WXG100 PF06013.7 gi|84489409|ref|YP_447641.1| - 1.2 9.1 8.9 2 8.4 3.1 2.3 2 0 0 2 2 2 0 Proteins of 100 residues with WXG DUF4404 PF14357.1 gi|84489409|ref|YP_447641.1| - 1.4 9.4 8.1 3.2 8.2 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) CK2S PF15011.1 gi|84489409|ref|YP_447641.1| - 1.4 8.6 4.6 6.2 6.5 0.6 2.1 2 0 0 2 2 2 0 Casein Kinase 2 substrate Rootletin PF15035.1 gi|84489409|ref|YP_447641.1| - 1.4 8.8 11.2 0.86 9.5 1.9 2.1 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion GP41 PF00517.12 gi|84489409|ref|YP_447641.1| - 1.6 8.2 8.3 3.2 7.2 1.0 2.1 2 0 0 2 2 2 0 Retroviral envelope protein Init_tRNA_PT PF04179.7 gi|84489409|ref|YP_447641.1| - 1.7 7.4 5.5 1.9 7.2 3.8 1.1 1 0 0 1 1 1 0 Initiator tRNA phosphoribosyl transferase DUF2353 PF09789.4 gi|84489409|ref|YP_447641.1| - 1.7 7.7 8.5 12 5.0 4.9 1.9 1 1 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) Sec8_exocyst PF04048.9 gi|84489409|ref|YP_447641.1| - 1.9 8.0 7.6 2.5 7.7 0.6 2.4 2 1 0 2 2 2 0 Sec8 exocyst complex component specific domain DUF4618 PF15397.1 gi|84489409|ref|YP_447641.1| - 2.1 7.5 11.6 2.2 7.5 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4618) T4SS PF07996.6 gi|84489409|ref|YP_447641.1| - 2.2 8.1 14.1 0.65 9.8 6.8 1.8 1 1 1 2 2 2 0 Type IV secretion system proteins Retrotrans_gag PF03732.12 gi|84489409|ref|YP_447641.1| - 2.2 8.3 5.4 0.64 10.1 0.4 2.0 2 0 0 2 2 2 0 Retrotransposon gag protein Mnd1 PF03962.10 gi|84489409|ref|YP_447641.1| - 2.2 7.8 13.4 32 4.1 9.3 2.0 1 1 0 1 1 1 0 Mnd1 family Glutaredoxin2_C PF04399.8 gi|84489409|ref|YP_447641.1| - 2.3 7.8 5.9 4.4 6.9 0.4 2.1 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain Fzo_mitofusin PF04799.8 gi|84489409|ref|YP_447641.1| - 2.4 7.5 7.8 2.8 7.3 1.8 2.1 2 0 0 2 2 2 0 fzo-like conserved region HALZ PF02183.13 gi|84489409|ref|YP_447641.1| - 2.4 7.9 8.1 1.3 8.7 1.1 2.6 2 0 0 2 2 2 0 Homeobox associated leucine zipper Tropomyosin_1 PF12718.2 gi|84489409|ref|YP_447641.1| - 2.5 7.9 15.0 0.78 9.5 3.1 2.1 2 0 0 2 2 2 0 Tropomyosin like ERM PF00769.14 gi|84489409|ref|YP_447641.1| - 2.9 7.3 12.1 1.4 8.4 2.4 2.0 2 0 0 2 2 2 0 Ezrin/radixin/moesin family DUF3571 PF12095.3 gi|84489409|ref|YP_447641.1| - 2.9 8.1 7.8 3.3 8.0 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3571) ALIX_LYPXL_bnd PF13949.1 gi|84489409|ref|YP_447641.1| - 2.9 6.7 9.8 3.6 6.4 1.8 2.0 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV ATG16 PF08614.6 gi|84489409|ref|YP_447641.1| - 3 7.6 13.9 7.7 6.2 3.0 1.9 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Cortex-I_coil PF09304.5 gi|84489409|ref|YP_447641.1| - 3.1 7.8 11.9 4 7.5 2.1 2.1 2 0 0 2 2 2 0 Cortexillin I, coiled coil TMF_DNA_bd PF12329.3 gi|84489409|ref|YP_447641.1| - 3.4 7.5 15.8 0.39 10.5 2.0 2.9 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Spectrin PF00435.16 gi|84489409|ref|YP_447641.1| - 3.4 7.9 10.6 5.8 7.2 2.4 2.2 2 0 0 2 2 2 0 Spectrin repeat DASH_Dad2 PF08654.5 gi|84489409|ref|YP_447641.1| - 3.8 7.5 6.6 2.4 8.2 0.8 2.4 2 1 0 2 2 2 0 DASH complex subunit Dad2 Cluap1 PF10234.4 gi|84489409|ref|YP_447641.1| - 3.9 6.5 10.3 6 5.9 1.6 2.1 2 0 0 2 2 2 0 Clusterin-associated protein-1 YlqD PF11068.3 gi|84489409|ref|YP_447641.1| - 4.3 7.3 15.4 6.1 6.8 1.6 2.1 2 0 0 2 2 2 0 YlqD protein IFT57 PF10498.4 gi|84489409|ref|YP_447641.1| - 4.7 5.8 12.4 1.4 7.5 2.9 2.1 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 EMP24_GP25L PF01105.19 gi|84489409|ref|YP_447641.1| - 4.8 6.8 6.8 5.9 6.5 1.1 2.2 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD 7TMR-HDED PF07697.6 gi|84489409|ref|YP_447641.1| - 4.8 6.8 11.8 4.2 7.0 1.2 2.0 1 1 1 2 2 2 0 7TM-HD extracellular Ax_dynein_light PF10211.4 gi|84489409|ref|YP_447641.1| - 5 6.9 13.6 1.8 8.3 2.2 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain DUF3584 PF12128.3 gi|84489409|ref|YP_447641.1| - 5 4.3 12.9 30 1.7 8.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Lge1 PF11488.3 gi|84489409|ref|YP_447641.1| - 5.3 7.3 7.9 2.4 8.4 0.9 2.2 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 End3 PF12761.2 gi|84489409|ref|YP_447641.1| - 5.4 6.6 9.1 2.1 7.9 0.7 2.1 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF3552 PF12072.3 gi|84489409|ref|YP_447641.1| - 5.5 6.1 14.0 3 7.0 1.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) APG6 PF04111.7 gi|84489409|ref|YP_447641.1| - 5.7 5.8 12.6 1.6 7.6 2.1 2.1 2 0 0 2 2 2 0 Autophagy protein Apg6 EURL PF06937.6 gi|84489409|ref|YP_447641.1| - 5.8 6.2 7.1 14 5.0 4.9 1.7 1 1 0 1 1 1 0 EURL protein DUF2762 PF10960.3 gi|84489409|ref|YP_447641.1| - 6 6.6 11.0 9.6 5.9 1.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2762) Gon7 PF08738.5 gi|84489409|ref|YP_447641.1| - 6.3 6.8 7.8 0.54 10.2 0.3 2.1 2 0 0 2 2 2 0 Gon7 family HemX PF04375.9 gi|84489409|ref|YP_447641.1| - 6.4 5.2 9.6 13 4.2 0.1 2.0 2 0 0 2 2 2 0 HemX CDC37_N PF03234.9 gi|84489409|ref|YP_447641.1| - 6.6 7.0 8.4 17 5.6 5.8 1.6 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding DUF2681 PF10883.3 gi|84489409|ref|YP_447641.1| - 7.5 6.8 13.6 7.3 6.8 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2681) Cauli_AT PF03233.8 gi|84489409|ref|YP_447641.1| - 7.7 6.2 9.6 9.9 5.8 1.5 2.1 2 0 0 2 2 2 0 Aphid transmission protein NTR2 PF15458.1 gi|84489409|ref|YP_447641.1| - 8.2 5.5 14.9 0.38 9.9 3.8 2.1 2 0 0 2 2 2 0 Nineteen complex-related protein 2 DUF2802 PF10975.3 gi|84489409|ref|YP_447641.1| - 9.1 6.1 9.3 2.5 7.9 2.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2802) SRP54 PF00448.17 gi|84489410|ref|YP_447642.1| - 1.7e-75 252.8 0.6 2.5e-75 252.2 0.4 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|84489410|ref|YP_447642.1| - 5.8e-12 45.5 3.1 5.8e-12 45.5 2.1 2.8 3 0 0 3 3 3 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.1 gi|84489410|ref|YP_447642.1| - 5.7e-06 26.0 0.2 1.2e-05 24.9 0.1 1.5 1 0 0 1 1 1 1 AAA domain MobB PF03205.9 gi|84489410|ref|YP_447642.1| - 6.3e-06 25.9 4.2 0.00032 20.3 0.1 3.3 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|84489410|ref|YP_447642.1| - 2.9e-05 23.5 2.5 2.9e-05 23.5 1.8 2.9 2 2 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.14 gi|84489410|ref|YP_447642.1| - 0.00092 18.7 3.5 0.00092 18.7 2.4 2.6 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.1 gi|84489410|ref|YP_447642.1| - 0.001 18.9 0.0 0.0026 17.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|84489410|ref|YP_447642.1| - 0.0019 18.4 0.1 0.0045 17.1 0.1 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.10 gi|84489410|ref|YP_447642.1| - 0.0025 17.5 1.8 0.56 9.8 0.1 3.3 3 0 0 3 3 3 1 NTPase Thymidylate_kin PF02223.12 gi|84489410|ref|YP_447642.1| - 0.0049 16.2 0.0 0.022 14.1 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase AAA_28 PF13521.1 gi|84489410|ref|YP_447642.1| - 0.005 16.8 0.0 0.015 15.2 0.0 1.9 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|84489410|ref|YP_447642.1| - 0.0075 15.0 1.3 0.046 12.4 0.9 2.1 1 1 0 1 1 1 1 ArgK protein AAA_19 PF13245.1 gi|84489410|ref|YP_447642.1| - 0.027 14.2 0.1 0.068 12.9 0.0 1.7 2 0 0 2 2 1 0 Part of AAA domain TPP_enzyme_N PF02776.13 gi|84489410|ref|YP_447642.1| - 0.04 13.3 0.0 0.074 12.5 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AAA_16 PF13191.1 gi|84489410|ref|YP_447642.1| - 0.059 13.3 0.1 0.19 11.7 0.0 1.9 2 0 0 2 2 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|84489410|ref|YP_447642.1| - 0.071 13.2 0.1 0.17 11.9 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|84489410|ref|YP_447642.1| - 0.073 13.9 0.1 0.073 13.9 0.1 3.4 2 2 0 2 2 1 0 AAA domain ABC_tran PF00005.22 gi|84489410|ref|YP_447642.1| - 0.44 10.8 0.0 0.44 10.8 0.0 3.0 2 1 0 2 2 1 0 ABC transporter Cobl PF09469.5 gi|84489410|ref|YP_447642.1| - 1.7 8.6 25.3 0.74 9.8 0.8 4.5 2 1 1 3 3 3 0 Cordon-bleu ubiquitin-like domain Methyltransf_31 PF13847.1 gi|84489411|ref|YP_447643.1| - 2.8e-20 72.4 1.1 4e-20 71.9 0.8 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|84489411|ref|YP_447643.1| - 3.2e-19 69.2 0.2 1.1e-18 67.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84489411|ref|YP_447643.1| - 1.1e-18 67.8 0.0 4.4e-18 65.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|84489411|ref|YP_447643.1| - 5.2e-16 58.9 0.0 9.7e-16 58.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84489411|ref|YP_447643.1| - 1.1e-12 47.6 0.0 1.8e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.1 gi|84489411|ref|YP_447643.1| - 1.9e-12 47.4 0.0 3.2e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|84489411|ref|YP_447643.1| - 2.3e-11 43.6 0.0 4.2e-11 42.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|84489411|ref|YP_447643.1| - 7.3e-11 41.6 0.3 1.1e-10 41.0 0.2 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_2 PF00891.13 gi|84489411|ref|YP_447643.1| - 5.5e-10 38.8 0.0 6.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_26 PF13659.1 gi|84489411|ref|YP_447643.1| - 6.6e-09 35.8 0.0 1e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|84489411|ref|YP_447643.1| - 3.1e-08 32.9 0.1 3.7e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.15 gi|84489411|ref|YP_447643.1| - 5.5e-08 32.2 0.1 9.5e-08 31.4 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.6 gi|84489411|ref|YP_447643.1| - 3.9e-06 26.3 0.0 5.1e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_PK PF05891.7 gi|84489411|ref|YP_447643.1| - 3.7e-05 23.1 0.0 4.7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase DREV PF05219.7 gi|84489411|ref|YP_447643.1| - 0.00017 20.6 0.0 0.00023 20.1 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_32 PF13679.1 gi|84489411|ref|YP_447643.1| - 0.00023 20.8 0.0 0.0005 19.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_5 PF01795.14 gi|84489411|ref|YP_447643.1| - 0.00039 19.8 0.0 0.00059 19.2 0.0 1.2 1 0 0 1 1 1 1 MraW methylase family FmrO PF07091.6 gi|84489411|ref|YP_447643.1| - 0.0005 19.1 0.0 0.00065 18.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) PCMT PF01135.14 gi|84489411|ref|YP_447643.1| - 0.00051 19.6 0.0 0.00075 19.0 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TehB PF03848.9 gi|84489411|ref|YP_447643.1| - 0.0015 17.7 1.0 0.002 17.3 0.7 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB UPF0020 PF01170.13 gi|84489411|ref|YP_447643.1| - 0.002 17.6 0.1 0.0031 17.1 0.1 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Spermine_synth PF01564.12 gi|84489411|ref|YP_447643.1| - 0.003 16.5 0.3 0.0053 15.7 0.2 1.4 1 1 0 1 1 1 1 Spermine/spermidine synthase FtsJ PF01728.14 gi|84489411|ref|YP_447643.1| - 0.0061 16.5 0.0 0.008 16.1 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase TrkA_N PF02254.13 gi|84489411|ref|YP_447643.1| - 0.032 14.2 0.0 0.088 12.8 0.0 1.7 2 0 0 2 2 1 0 TrkA-N domain Methyltransf_8 PF05148.10 gi|84489411|ref|YP_447643.1| - 0.041 13.5 0.0 0.097 12.2 0.0 1.7 1 1 0 1 1 1 0 Hypothetical methyltransferase DUF368 PF04018.8 gi|84489412|ref|YP_447644.1| - 4.8e-72 242.2 25.2 4.8e-72 242.2 17.5 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF368) AmiS_UreI PF02293.10 gi|84489412|ref|YP_447644.1| - 0.0076 15.9 2.9 0.0076 15.9 2.0 1.9 1 1 0 1 1 1 1 AmiS/UreI family transporter dUTPase PF00692.14 gi|84489413|ref|YP_447645.1| - 1.4e-12 47.2 0.0 1.9e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase Herpes_ORF11 PF04797.8 gi|84489413|ref|YP_447645.1| - 0.0093 14.4 0.0 0.014 13.8 0.0 1.2 1 0 0 1 1 1 1 Herpesvirus dUTPase protein TPP_enzyme_N PF02776.13 gi|84489414|ref|YP_447646.1| - 5e-50 169.3 0.0 1.9e-49 167.4 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|84489414|ref|YP_447646.1| - 6.9e-32 110.1 0.1 3.9e-30 104.4 0.0 2.9 2 1 1 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|84489414|ref|YP_447646.1| - 1.5e-27 95.9 0.0 7.1e-27 93.8 0.0 2.0 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, central domain Polysacc_deac_1 PF01522.16 gi|84489414|ref|YP_447646.1| - 0.0094 15.5 0.4 0.13 11.8 0.0 2.7 3 0 0 3 3 3 1 Polysaccharide deacetylase DUF2774 PF11242.3 gi|84489414|ref|YP_447646.1| - 0.032 14.2 0.0 2.4 8.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) Cas_Cas6 PF01881.11 gi|84489414|ref|YP_447646.1| - 0.27 11.4 7.6 0.4 10.9 0.9 2.4 2 0 0 2 2 2 0 CRISPR associated protein Cas6 Beta_helix PF13229.1 gi|84489415|ref|YP_447647.1| - 0.00053 19.7 20.8 0.00053 19.7 14.4 16.4 2 2 10 13 13 13 2 Right handed beta helix region DUF4013 PF13197.1 gi|84489416|ref|YP_447648.1| - 3.2e-24 85.1 28.0 3.2e-24 85.1 19.4 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) HTH_3 PF01381.17 gi|84489417|ref|YP_447649.1| - 4.1e-14 52.1 0.3 4.7e-14 51.9 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|84489417|ref|YP_447649.1| - 2e-10 40.5 0.2 2.4e-10 40.3 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|84489417|ref|YP_447649.1| - 8.4e-08 32.2 0.0 1.1e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|84489417|ref|YP_447649.1| - 5.7e-06 26.0 1.3 0.0003 20.5 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|84489417|ref|YP_447649.1| - 8.5e-06 25.3 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|84489417|ref|YP_447649.1| - 0.00034 20.7 0.1 0.00055 20.0 0.1 1.5 1 1 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_38 PF13936.1 gi|84489417|ref|YP_447649.1| - 0.00046 19.6 0.7 0.00069 19.1 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_7 PF02796.10 gi|84489417|ref|YP_447649.1| - 0.00052 19.8 0.2 0.0053 16.5 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase CENP-B_N PF04218.8 gi|84489417|ref|YP_447649.1| - 0.0021 17.4 0.2 0.012 15.0 0.0 1.9 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain HTH_24 PF13412.1 gi|84489417|ref|YP_447649.1| - 0.004 16.5 0.0 0.0067 15.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|84489417|ref|YP_447649.1| - 0.0063 16.1 0.8 0.0086 15.7 0.0 1.6 2 0 0 2 2 2 1 HTH domain MarR PF01047.17 gi|84489417|ref|YP_447649.1| - 0.0072 16.0 0.1 0.015 15.0 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.1 gi|84489417|ref|YP_447649.1| - 0.012 15.2 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Crp_2 PF13545.1 gi|84489417|ref|YP_447649.1| - 0.013 15.2 0.1 0.025 14.3 0.0 1.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.11 gi|84489417|ref|YP_447649.1| - 0.02 14.1 0.1 0.033 13.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 ABC2_membrane_4 PF12730.2 gi|84489418|ref|YP_447650.1| - 2e-30 105.6 44.4 2.5e-30 105.3 30.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|84489418|ref|YP_447650.1| - 6.1e-08 31.8 32.7 1.2e-07 30.8 22.6 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|84489418|ref|YP_447650.1| - 0.0018 17.6 46.6 0.0047 16.2 32.3 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|84489419|ref|YP_447651.1| - 2e-30 105.9 0.2 2e-30 105.9 0.1 1.8 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|84489419|ref|YP_447651.1| - 3e-12 47.1 14.6 3.4e-11 43.6 3.0 3.1 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|84489419|ref|YP_447651.1| - 4.3e-06 26.0 0.6 4.3e-06 26.0 0.4 3.2 2 1 1 3 3 3 1 AAA ATPase domain DUF258 PF03193.11 gi|84489419|ref|YP_447651.1| - 3.8e-05 22.9 0.6 0.00026 20.2 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function, DUF258 MMR_HSR1 PF01926.18 gi|84489419|ref|YP_447651.1| - 0.0012 18.7 5.0 0.028 14.3 0.3 2.5 1 1 0 2 2 2 2 50S ribosome-binding GTPase SMC_N PF02463.14 gi|84489419|ref|YP_447651.1| - 0.0041 16.3 1.3 0.27 10.4 0.1 2.4 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|84489419|ref|YP_447651.1| - 0.0067 15.8 0.3 0.59 9.5 0.1 2.2 1 1 1 2 2 2 1 AAA-like domain AAA_22 PF13401.1 gi|84489419|ref|YP_447651.1| - 0.013 15.6 0.6 0.041 14.0 0.1 2.1 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|84489419|ref|YP_447651.1| - 0.11 12.0 0.1 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.17 gi|84489419|ref|YP_447651.1| - 0.21 11.0 2.5 0.18 11.2 0.2 2.0 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain Lactamase_B PF00753.22 gi|84489420|ref|YP_447652.1| - 6.5e-31 107.4 0.0 2.3e-30 105.7 0.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|84489420|ref|YP_447652.1| - 4.8e-09 36.0 0.0 5.9e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|84489420|ref|YP_447652.1| - 5e-05 23.0 0.0 6.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Radical_SAM PF04055.16 gi|84489421|ref|YP_447653.1| - 1e-14 55.0 0.1 3e-14 53.5 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|84489421|ref|YP_447653.1| - 1.3e-07 31.6 0.1 4.4e-07 29.9 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|84489421|ref|YP_447653.1| - 1.6e-06 28.3 1.0 4.5e-06 26.8 0.7 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|84489421|ref|YP_447653.1| - 2e-06 27.9 0.0 5.8e-06 26.4 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Takusan PF04822.8 gi|84489421|ref|YP_447653.1| - 0.2 11.4 1.6 10 5.9 0.0 2.5 2 0 0 2 2 2 0 Takusan ABC_tran PF00005.22 gi|84489422|ref|YP_447654.1| - 4.3e-42 143.6 0.2 1.8e-22 80.0 0.0 2.9 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.14 gi|84489422|ref|YP_447654.1| - 3.2e-12 46.1 8.9 1.4e-05 24.4 2.1 3.6 3 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain RLI PF04068.10 gi|84489422|ref|YP_447654.1| - 1e-10 41.0 2.4 1.8e-10 40.2 1.6 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.1 gi|84489422|ref|YP_447654.1| - 2.9e-10 40.5 18.8 0.009 16.0 0.0 4.7 3 2 2 5 5 4 4 AAA domain AAA_15 PF13175.1 gi|84489422|ref|YP_447654.1| - 2.7e-08 33.2 7.1 0.022 13.7 0.0 3.9 3 1 0 4 4 4 2 AAA ATPase domain DUF258 PF03193.11 gi|84489422|ref|YP_447654.1| - 2.1e-07 30.2 0.0 0.015 14.5 0.0 3.4 3 0 0 3 3 3 1 Protein of unknown function, DUF258 AAA PF00004.24 gi|84489422|ref|YP_447654.1| - 7.7e-05 22.9 0.1 0.41 10.8 0.0 3.2 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|84489422|ref|YP_447654.1| - 0.00011 22.2 0.0 1.4 9.1 0.0 3.3 3 0 0 3 3 3 2 RNA helicase SbcCD_C PF13558.1 gi|84489422|ref|YP_447654.1| - 0.00026 20.8 0.3 2.5 8.0 0.1 3.6 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.1 gi|84489422|ref|YP_447654.1| - 0.00032 20.1 0.1 0.062 12.8 0.0 3.0 3 0 0 3 3 3 1 P-loop containing region of AAA domain Fer4 PF00037.22 gi|84489422|ref|YP_447654.1| - 0.00038 19.9 3.0 0.00038 19.9 2.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489422|ref|YP_447654.1| - 0.00045 20.5 9.2 0.00082 19.7 6.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_18 PF13238.1 gi|84489422|ref|YP_447654.1| - 0.00049 20.3 3.4 0.086 13.1 0.2 3.5 2 2 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|84489422|ref|YP_447654.1| - 0.00058 20.6 3.5 0.86 10.4 0.1 3.4 2 2 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|84489422|ref|YP_447654.1| - 0.0023 16.8 0.3 1.1 8.0 0.0 2.5 3 0 0 3 3 2 2 NB-ARC domain Fer4_6 PF12837.2 gi|84489422|ref|YP_447654.1| - 0.0043 16.8 10.3 0.019 14.7 1.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain RuvB_N PF05496.7 gi|84489422|ref|YP_447654.1| - 0.0054 15.7 0.1 0.27 10.2 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_25 PF13481.1 gi|84489422|ref|YP_447654.1| - 0.0055 16.1 0.1 2.9 7.2 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.1 gi|84489422|ref|YP_447654.1| - 0.0067 16.7 11.1 0.052 13.8 2.0 2.8 2 2 0 2 2 2 1 AAA domain Rad17 PF03215.10 gi|84489422|ref|YP_447654.1| - 0.016 13.9 0.0 4.1 5.9 0.0 2.3 2 0 0 2 2 2 0 Rad17 cell cycle checkpoint protein NACHT PF05729.7 gi|84489422|ref|YP_447654.1| - 0.02 14.5 0.8 13 5.4 0.0 3.3 4 0 0 4 4 3 0 NACHT domain Fer4_9 PF13187.1 gi|84489422|ref|YP_447654.1| - 0.022 15.0 10.6 0.049 13.9 7.4 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA_10 PF12846.2 gi|84489422|ref|YP_447654.1| - 0.032 13.6 0.5 5.1 6.4 0.0 2.9 3 0 0 3 3 3 0 AAA-like domain AAA_13 PF13166.1 gi|84489422|ref|YP_447654.1| - 0.039 12.4 2.0 0.3 9.4 0.0 2.9 2 1 0 3 3 3 0 AAA domain Fer4_10 PF13237.1 gi|84489422|ref|YP_447654.1| - 0.041 13.6 10.9 0.075 12.8 7.5 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489422|ref|YP_447654.1| - 0.041 13.7 9.2 0.045 13.6 0.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_24 PF13479.1 gi|84489422|ref|YP_447654.1| - 0.043 13.3 0.2 2.2 7.8 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|84489422|ref|YP_447654.1| - 0.046 13.6 1.4 4.8 7.0 0.0 3.4 3 1 0 3 3 3 0 AAA domain AAA_33 PF13671.1 gi|84489422|ref|YP_447654.1| - 0.073 12.9 1.7 7.5 6.4 0.0 3.5 3 1 0 3 3 3 0 AAA domain SRP54 PF00448.17 gi|84489422|ref|YP_447654.1| - 0.079 12.3 0.5 2 7.8 0.0 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_28 PF13521.1 gi|84489422|ref|YP_447654.1| - 0.13 12.2 0.7 19 5.2 0.0 3.0 4 0 0 4 4 3 0 AAA domain AAA_16 PF13191.1 gi|84489422|ref|YP_447654.1| - 0.19 11.7 3.1 1.1 9.2 0.1 3.1 3 1 0 3 3 3 0 AAA ATPase domain Fer4_21 PF14697.1 gi|84489422|ref|YP_447654.1| - 0.22 11.4 9.1 0.43 10.4 6.3 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA_22 PF13401.1 gi|84489422|ref|YP_447654.1| - 0.54 10.4 6.0 3.2 7.8 0.2 3.6 4 1 0 4 4 3 0 AAA domain Fer4_16 PF13484.1 gi|84489422|ref|YP_447654.1| - 0.59 10.9 9.2 2.9 8.7 6.4 2.2 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|84489422|ref|YP_447654.1| - 2.1 8.4 7.8 4.2 7.4 5.4 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain CBFD_NFYB_HMF PF00808.18 gi|84489423|ref|YP_447655.1| - 7.9e-16 57.8 0.1 8.7e-16 57.7 0.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84489423|ref|YP_447655.1| - 3.2e-07 30.3 0.0 3.9e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|84489423|ref|YP_447655.1| - 0.00077 19.6 0.0 0.00083 19.4 0.0 1.2 1 0 0 1 1 1 1 Kinetochore component CENP-S AAA_32 PF13654.1 gi|84489423|ref|YP_447655.1| - 0.0073 15.0 0.1 0.0082 14.8 0.1 1.0 1 0 0 1 1 1 1 AAA domain TFIID-31kDa PF02291.10 gi|84489423|ref|YP_447655.1| - 0.081 12.7 0.0 0.081 12.7 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TAF PF02969.12 gi|84489423|ref|YP_447655.1| - 0.12 12.3 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) CENP-T PF15511.1 gi|84489423|ref|YP_447655.1| - 0.14 11.3 0.3 0.2 10.8 0.2 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T PMT_2 PF13231.1 gi|84489424|ref|YP_447656.1| - 2.5e-29 102.2 17.9 2.5e-29 102.2 12.4 4.3 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT_2 PF13231.1 gi|84489425|ref|YP_447657.1| - 5.3e-21 75.1 17.5 5.3e-21 75.1 12.1 2.9 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PG_binding_4 PF12229.3 gi|84489425|ref|YP_447657.1| - 0.0052 17.0 6.5 0.0097 16.1 4.5 1.4 1 0 0 1 1 1 1 Putative peptidoglycan binding domain NAD_synthase PF02540.12 gi|84489426|ref|YP_447658.1| - 2.8e-05 23.1 0.1 9.6e-05 21.3 0.0 2.0 1 1 2 3 3 3 1 NAD synthase Asn_synthase PF00733.16 gi|84489426|ref|YP_447658.1| - 8.7e-05 22.1 0.0 0.00014 21.4 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|84489426|ref|YP_447658.1| - 0.00025 20.4 0.1 0.0012 18.2 0.0 2.0 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|84489426|ref|YP_447658.1| - 0.00038 19.1 0.2 0.0012 17.4 0.1 1.8 1 1 0 1 1 1 1 tRNA methyl transferase ATP_bind_3 PF01171.15 gi|84489426|ref|YP_447658.1| - 0.063 12.7 0.0 0.21 11.0 0.0 1.8 2 0 0 2 2 2 0 PP-loop family ThiI PF02568.9 gi|84489426|ref|YP_447658.1| - 0.068 12.6 0.0 0.16 11.4 0.0 1.6 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) A2M PF00207.17 gi|84489426|ref|YP_447658.1| - 0.071 12.6 0.0 0.17 11.4 0.0 1.6 1 0 0 1 1 1 0 Alpha-2-macroglobulin family Lyase_1 PF00206.15 gi|84489427|ref|YP_447659.1| - 2.4e-60 204.3 0.1 3.2e-60 203.9 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|84489427|ref|YP_447659.1| - 7.6e-16 57.9 0.0 2.2e-15 56.4 0.0 1.9 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal MCM_N PF14551.1 gi|84489427|ref|YP_447659.1| - 0.0024 18.3 0.1 0.014 15.9 0.0 2.1 2 0 0 2 2 2 1 MCM N-terminal domain DUF2680 PF10925.3 gi|84489427|ref|YP_447659.1| - 0.26 11.2 1.0 0.63 9.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Beta_helix PF13229.1 gi|84489428|ref|YP_447660.1| - 0.00072 19.3 28.1 0.00072 19.3 19.5 16.4 5 4 10 15 15 15 5 Right handed beta helix region Ribosomal_S27 PF01599.14 gi|84489429|ref|YP_447661.1| - 6.2e-20 70.7 5.0 6.9e-20 70.6 3.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a NCD3G PF07562.9 gi|84489429|ref|YP_447661.1| - 0.002 17.8 0.3 0.0022 17.6 0.2 1.2 1 0 0 1 1 1 1 Nine Cysteines Domain of family 3 GPCR GCC2_GCC3 PF07699.8 gi|84489429|ref|YP_447661.1| - 0.008 15.7 0.5 0.0099 15.4 0.4 1.1 1 0 0 1 1 1 1 GCC2 and GCC3 zinc_ribbon_4 PF13717.1 gi|84489429|ref|YP_447661.1| - 0.052 13.2 1.1 1.8 8.3 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|84489429|ref|YP_447661.1| - 0.064 12.8 1.2 1.7 8.3 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|84489429|ref|YP_447661.1| - 0.091 12.4 1.5 3.1 7.5 0.1 2.1 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.2 gi|84489429|ref|YP_447661.1| - 0.67 9.8 4.2 1.4 8.7 2.9 1.6 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_S24e PF01282.14 gi|84489430|ref|YP_447662.1| - 3.1e-19 68.5 0.0 4.1e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e DUF359 PF04019.7 gi|84489431|ref|YP_447663.1| - 2.1e-39 133.6 0.3 2.8e-39 133.2 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF359) DUF1874 PF08960.5 gi|84489431|ref|YP_447663.1| - 0.07 12.8 0.2 0.38 10.5 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1874) Spt4 PF06093.8 gi|84489432|ref|YP_447664.1| - 2.8e-13 49.5 0.1 4.1e-13 49.0 0.1 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger PolC_DP2 PF03833.8 gi|84489432|ref|YP_447664.1| - 0.034 11.8 0.3 0.03 12.0 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 RecR PF02132.10 gi|84489432|ref|YP_447664.1| - 0.083 12.3 5.1 0.13 11.6 3.6 1.3 1 0 0 1 1 1 0 RecR protein Auto_anti-p27 PF06677.7 gi|84489432|ref|YP_447664.1| - 1.3 8.8 5.0 8.4 6.2 3.5 2.0 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SHS2_Rpb7-N PF03876.12 gi|84489433|ref|YP_447665.1| - 2.7e-17 62.6 0.1 5.1e-17 61.7 0.1 1.5 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|84489433|ref|YP_447665.1| - 3.3e-11 43.1 0.1 6.6e-11 42.1 0.1 1.5 1 0 0 1 1 1 1 S1 RNA binding domain Pyrophosphatase PF00719.14 gi|84489434|ref|YP_447666.1| - 8.4e-62 207.2 0.2 9.7e-62 207.0 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase Fcf1 PF04900.7 gi|84489435|ref|YP_447667.1| - 4.4e-10 39.5 0.5 6.6e-10 38.9 0.3 1.2 1 0 0 1 1 1 1 Fcf1 PIN_4 PF13638.1 gi|84489435|ref|YP_447667.1| - 1.7e-05 24.8 1.0 0.012 15.6 0.0 2.1 1 1 1 2 2 2 2 PIN domain PIN PF01850.16 gi|84489435|ref|YP_447667.1| - 0.0053 17.0 0.1 0.0065 16.7 0.1 1.2 1 0 0 1 1 1 1 PIN domain DUF188 PF02639.9 gi|84489435|ref|YP_447667.1| - 0.03 13.7 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 GTP_EFTU PF00009.22 gi|84489436|ref|YP_447668.1| - 3.8e-43 147.1 0.2 6.7e-43 146.3 0.2 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|84489436|ref|YP_447668.1| - 9.7e-33 112.0 0.0 2e-32 111.0 0.0 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|84489436|ref|YP_447668.1| - 2e-08 34.1 0.1 5.2e-08 32.8 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|84489436|ref|YP_447668.1| - 0.00084 19.2 0.0 0.002 18.0 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.4 gi|84489436|ref|YP_447668.1| - 0.0014 18.1 0.6 0.23 10.9 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Nop10p PF04135.7 gi|84489436|ref|YP_447668.1| - 0.01 15.5 1.7 0.023 14.4 1.2 1.5 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family FeoB_N PF02421.13 gi|84489436|ref|YP_447668.1| - 0.014 14.6 0.4 2 7.7 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B PolC_DP2 PF03833.8 gi|84489436|ref|YP_447668.1| - 0.052 11.2 0.5 0.072 10.7 0.3 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF35_N PF12172.3 gi|84489436|ref|YP_447668.1| - 0.84 9.6 6.9 1 9.3 2.9 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.1 gi|84489436|ref|YP_447668.1| - 1.6 8.0 7.2 3 7.1 5.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain Opy2 PF09463.5 gi|84489436|ref|YP_447668.1| - 5.9 7.0 12.6 1.2 9.2 6.2 1.8 2 0 0 2 2 1 0 Opy2 protein Ribosomal_S6e PF01092.14 gi|84489437|ref|YP_447669.1| - 4e-35 120.2 1.7 4.4e-35 120.0 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|84489438|ref|YP_447670.1| - 1.4e-33 115.9 1.1 6.9e-33 113.6 0.1 2.5 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|84489438|ref|YP_447670.1| - 7.7e-21 74.0 2.3 2.2e-20 72.5 1.6 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 gi|84489438|ref|YP_447670.1| - 1.1e-14 53.7 1.1 2.7e-14 52.5 0.8 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.20 gi|84489438|ref|YP_447670.1| - 1.6e-10 40.9 2.9 9.2e-06 25.6 0.0 2.9 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|84489438|ref|YP_447670.1| - 6e-06 26.2 0.0 1.7e-05 24.7 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase Miro PF08477.8 gi|84489438|ref|YP_447670.1| - 0.00089 19.7 0.0 0.0029 18.0 0.0 1.9 1 0 0 1 1 1 1 Miro-like protein Dynamin_N PF00350.18 gi|84489438|ref|YP_447670.1| - 0.0066 16.2 0.1 0.28 11.0 0.0 3.0 2 1 1 3 3 3 1 Dynamin family ATP_bind_1 PF03029.12 gi|84489438|ref|YP_447670.1| - 0.0099 15.4 0.0 0.031 13.7 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Ras PF00071.17 gi|84489438|ref|YP_447670.1| - 0.028 13.8 0.0 0.064 12.6 0.0 1.7 1 1 0 1 1 1 0 Ras family NDK PF00334.14 gi|84489439|ref|YP_447671.1| - 9.3e-57 190.5 0.0 1.1e-56 190.4 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.15 gi|84489440|ref|YP_447672.1| - 7.3e-20 70.6 1.3 7.6e-20 70.5 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.9 gi|84489440|ref|YP_447672.1| - 8e-06 25.3 2.1 1e-05 25.0 1.4 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-dskA_traR PF01258.12 gi|84489440|ref|YP_447672.1| - 0.021 14.5 0.5 0.021 14.5 0.3 1.6 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger ICAM_N PF03921.9 gi|84489440|ref|YP_447672.1| - 0.022 14.1 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain zf-C4_ClpX PF06689.8 gi|84489440|ref|YP_447672.1| - 0.037 13.5 1.7 0.058 12.9 0.0 1.9 2 0 0 2 2 2 0 ClpX C4-type zinc finger DUF2116 PF09889.4 gi|84489440|ref|YP_447672.1| - 0.067 13.0 1.0 4.1 7.2 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) YHS PF04945.8 gi|84489440|ref|YP_447672.1| - 0.16 11.8 0.8 0.19 11.5 0.6 1.1 1 0 0 1 1 1 0 YHS domain zf-ribbon_3 PF13248.1 gi|84489440|ref|YP_447672.1| - 0.28 10.4 2.7 0.46 9.7 1.7 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489440|ref|YP_447672.1| - 0.37 10.3 0.4 0.37 10.3 0.3 2.0 2 1 0 1 1 1 0 zinc-ribbon domain DUF581 PF04570.9 gi|84489440|ref|YP_447672.1| - 0.55 9.5 3.1 0.93 8.8 2.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF581) Ribosomal_S28e PF01200.13 gi|84489441|ref|YP_447673.1| - 3.7e-29 100.2 2.7 4e-29 100.1 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e KOW PF00467.24 gi|84489441|ref|YP_447673.1| - 0.075 12.7 0.5 1.4 8.7 0.0 2.6 1 1 2 3 3 3 0 KOW motif Ribosomal_L7Ae PF01248.21 gi|84489442|ref|YP_447674.1| - 5.4e-26 89.9 0.2 6.5e-26 89.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family eRF1_3 PF03465.10 gi|84489442|ref|YP_447674.1| - 0.11 12.7 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 eRF1 domain 3 UbiA PF01040.13 gi|84489443|ref|YP_447675.1| - 2.2e-44 151.6 13.1 2.8e-44 151.2 9.1 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF1146 PF06612.6 gi|84489443|ref|YP_447675.1| - 0.35 10.8 12.9 0.24 11.3 0.3 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1146) Herpes_LMP1 PF05297.6 gi|84489443|ref|YP_447675.1| - 0.46 9.3 13.1 0.93 8.3 9.1 1.5 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) AAA_16 PF13191.1 gi|84489444|ref|YP_447676.1| - 1.4e-08 34.9 0.0 5.5e-08 33.0 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|84489444|ref|YP_447676.1| - 1.2e-06 28.7 0.0 4.6e-06 26.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain Cdc6_C PF09079.6 gi|84489444|ref|YP_447676.1| - 1.3e-05 24.8 0.3 0.0012 18.5 0.5 3.2 2 1 0 2 2 2 1 CDC6, C terminal AAA_11 PF13086.1 gi|84489444|ref|YP_447676.1| - 0.0053 16.3 0.0 0.0076 15.8 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489444|ref|YP_447676.1| - 0.0088 16.3 0.0 0.028 14.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|84489444|ref|YP_447676.1| - 0.0093 16.1 0.0 0.026 14.7 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|84489444|ref|YP_447676.1| - 0.011 16.5 0.1 0.029 15.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|84489444|ref|YP_447676.1| - 0.015 15.1 1.2 0.041 13.7 0.0 2.4 2 2 0 2 2 2 0 AAA domain AAA_35 PF14516.1 gi|84489444|ref|YP_447676.1| - 0.017 13.7 0.1 0.079 11.5 0.0 2.0 1 1 0 1 1 1 0 AAA-like domain AAA_33 PF13671.1 gi|84489444|ref|YP_447676.1| - 0.029 14.2 0.0 0.062 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|84489444|ref|YP_447676.1| - 0.056 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain Sp100 PF03172.8 gi|84489444|ref|YP_447676.1| - 0.059 13.3 0.2 0.42 10.5 0.0 2.5 2 1 1 3 3 3 0 Sp100 domain Archease PF01951.11 gi|84489446|ref|YP_447678.1| - 6.2e-37 126.6 5.0 6.9e-37 126.4 3.5 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) FlpD PF02662.11 gi|84489447|ref|YP_447679.1| - 8.6e-56 186.9 0.1 9.7e-56 186.7 0.0 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit FrhB_FdhB_C PF04432.8 gi|84489448|ref|YP_447680.1| - 9e-42 142.2 0.3 9e-42 142.2 0.2 2.3 1 1 1 2 2 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|84489448|ref|YP_447680.1| - 8.3e-20 70.4 0.1 2.5e-19 68.8 0.0 1.9 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.1 gi|84489448|ref|YP_447680.1| - 6.9e-10 38.8 17.3 9.5e-10 38.3 10.7 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489448|ref|YP_447680.1| - 6.6e-07 29.6 18.0 0.00041 20.7 4.9 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489448|ref|YP_447680.1| - 1.4e-06 28.4 28.4 2.7e-05 24.3 12.7 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489448|ref|YP_447680.1| - 1.9e-06 28.0 14.8 1.9e-06 28.0 10.3 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489448|ref|YP_447680.1| - 1.2e-05 25.0 29.5 0.00029 20.5 13.9 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489448|ref|YP_447680.1| - 0.0002 21.1 14.6 0.071 12.9 3.9 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84489448|ref|YP_447680.1| - 0.0029 17.1 19.1 0.0074 15.8 2.6 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489448|ref|YP_447680.1| - 0.007 16.2 2.1 0.007 16.2 1.5 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489448|ref|YP_447680.1| - 0.0095 16.3 21.5 0.047 14.0 13.7 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489448|ref|YP_447680.1| - 0.14 12.9 0.4 0.14 12.9 0.3 3.3 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|84489448|ref|YP_447680.1| - 0.33 11.5 23.9 0.32 11.6 3.0 3.3 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84489448|ref|YP_447680.1| - 3.2 8.3 30.4 0.085 13.2 2.8 3.4 3 1 0 3 3 3 0 4Fe-4S binding domain Molybdop_Fe4S4 PF04879.11 gi|84489449|ref|YP_447681.1| - 1.4e-12 47.2 3.4 3e-12 46.1 2.4 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.17 gi|84489449|ref|YP_447681.1| - 0.00066 18.5 6.8 0.019 13.6 0.4 2.7 1 1 0 2 2 2 2 Molybdopterin oxidoreductase DUF1694 PF07997.6 gi|84489449|ref|YP_447681.1| - 0.021 14.7 1.0 0.021 14.7 0.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1694) RtcB PF01139.12 gi|84489450|ref|YP_447682.1| - 9.2e-152 505.8 0.0 1e-151 505.6 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB PNP_UDP_1 PF01048.15 gi|84489451|ref|YP_447683.1| - 3e-38 131.1 0.0 3.3e-38 130.9 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DUF2574 PF10836.3 gi|84489451|ref|YP_447683.1| - 0.02 14.6 0.0 0.036 13.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) NadA PF02445.11 gi|84489452|ref|YP_447684.1| - 2.6e-115 384.3 2.4 2.9e-115 384.1 1.7 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Microtub_assoc PF07989.6 gi|84489452|ref|YP_447684.1| - 0.17 11.7 0.1 0.17 11.7 0.1 2.0 2 0 0 2 2 2 0 Microtubule associated CIA30 PF08547.7 gi|84489453|ref|YP_447685.1| - 0.0032 17.3 0.0 0.0046 16.8 0.0 1.2 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) DUF373 PF04123.8 gi|84489453|ref|YP_447685.1| - 1.1 8.2 13.1 0.061 12.3 2.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1418 PF07214.7 gi|84489453|ref|YP_447685.1| - 4.5 6.9 6.4 2.2 7.9 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1418) Glyco_trans_1_3 PF13528.1 gi|84489454|ref|YP_447686.1| - 4.1e-83 279.2 0.0 5.5e-83 278.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 1 Glycos_transf_2 PF00535.21 gi|84489454|ref|YP_447686.1| - 1.3e-28 99.7 0.0 4.7e-28 97.9 0.0 2.0 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489454|ref|YP_447686.1| - 5.5e-10 39.4 0.0 9.9e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84489454|ref|YP_447686.1| - 3.6e-09 36.1 2.5 1.8e-08 33.8 0.5 2.9 2 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tran_28_C PF04101.11 gi|84489454|ref|YP_447686.1| - 1.9e-08 34.1 0.1 4.2e-08 33.0 0.1 1.6 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_tranf_2_4 PF13704.1 gi|84489454|ref|YP_447686.1| - 0.0011 19.2 0.0 0.024 14.9 0.0 2.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 RNA_pol_I_A49 PF06870.7 gi|84489454|ref|YP_447686.1| - 0.011 14.2 0.2 0.011 14.2 0.1 1.9 3 0 0 3 3 3 0 A49-like RNA polymerase I associated factor MULE PF10551.4 gi|84489454|ref|YP_447686.1| - 0.084 13.0 0.2 1.4 9.0 0.0 2.5 2 0 0 2 2 2 0 MULE transposase domain Radical_SAM PF04055.16 gi|84489455|ref|YP_447687.1| - 1.6e-11 44.6 0.1 2.7e-11 43.9 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Blo-t-5 PF11642.3 gi|84489455|ref|YP_447687.1| - 0.007 16.1 0.4 0.016 14.9 0.3 1.5 1 0 0 1 1 1 1 Mite allergen Blo t 5 NAGidase PF07555.8 gi|84489455|ref|YP_447687.1| - 0.022 13.6 0.1 0.044 12.7 0.1 1.4 1 0 0 1 1 1 0 beta-N-acetylglucosaminidase Fer4_14 PF13394.1 gi|84489455|ref|YP_447687.1| - 0.043 13.8 0.0 0.099 12.6 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF1848 PF08902.6 gi|84489455|ref|YP_447687.1| - 0.62 9.5 8.2 1.2 8.5 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1848) Shikimate_dh_N PF08501.6 gi|84489456|ref|YP_447688.1| - 1.7e-32 111.3 0.4 4.2e-32 110.0 0.3 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|84489456|ref|YP_447688.1| - 1.5e-17 63.9 0.3 2.6e-17 63.2 0.2 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 gi|84489456|ref|YP_447688.1| - 1.3e-06 27.6 0.0 1.6e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase OCD_Mu_crystall PF02423.10 gi|84489456|ref|YP_447688.1| - 0.00013 20.8 0.1 0.00018 20.4 0.0 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family F420_oxidored PF03807.12 gi|84489456|ref|YP_447688.1| - 0.0011 19.2 0.1 0.0027 18.0 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|84489456|ref|YP_447688.1| - 0.0092 16.2 0.0 0.018 15.2 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding GARS_N PF02844.10 gi|84489456|ref|YP_447688.1| - 0.0094 16.3 0.3 0.025 15.0 0.2 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain Glyco_hydro_4 PF02056.11 gi|84489456|ref|YP_447688.1| - 0.044 13.1 1.1 0.065 12.5 0.2 1.8 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase NAD_Gly3P_dh_N PF01210.18 gi|84489456|ref|YP_447688.1| - 0.051 13.3 0.1 0.098 12.3 0.1 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|84489456|ref|YP_447688.1| - 0.063 12.7 0.1 0.14 11.6 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA PilN PF05137.8 gi|84489456|ref|YP_447688.1| - 0.067 13.0 0.0 0.17 11.7 0.0 1.7 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) Semialdhyde_dh PF01118.19 gi|84489456|ref|YP_447688.1| - 0.13 12.5 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain tRNA-synt_His PF13393.1 gi|84489457|ref|YP_447689.1| - 1.5e-66 224.6 0.0 1.8e-66 224.3 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|84489457|ref|YP_447689.1| - 5.4e-29 100.9 0.1 2.5e-28 98.8 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|84489457|ref|YP_447689.1| - 3.3e-17 62.2 1.0 6.9e-17 61.1 0.7 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.15 gi|84489457|ref|YP_447689.1| - 2.6e-08 33.0 0.2 5.5e-06 25.3 0.1 2.5 2 1 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.15 gi|84489457|ref|YP_447689.1| - 0.0012 18.0 0.0 0.0034 16.6 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) HGTP_anticodon2 PF12745.2 gi|84489457|ref|YP_447689.1| - 0.049 12.7 1.5 0.05 12.7 0.2 1.6 2 0 0 2 2 2 0 Anticodon binding domain of tRNAs PRA-CH PF01502.13 gi|84489458|ref|YP_447690.1| - 1.5e-34 117.4 0.4 2e-34 117.0 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase T2SE PF00437.15 gi|84489459|ref|YP_447691.1| - 2.2e-10 39.9 0.0 4.1e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 gi|84489459|ref|YP_447691.1| - 3.4e-09 36.2 0.2 1.4e-08 34.2 0.1 2.1 1 0 0 1 1 1 1 KH domain AAA_17 PF13207.1 gi|84489459|ref|YP_447691.1| - 1.2e-07 32.5 0.0 6.7e-07 30.1 0.0 2.4 2 1 0 2 2 1 1 AAA domain PIN PF01850.16 gi|84489459|ref|YP_447691.1| - 3.8e-06 27.2 0.0 9.8e-06 25.9 0.0 1.8 1 0 0 1 1 1 1 PIN domain KH_3 PF13014.1 gi|84489459|ref|YP_447691.1| - 1.6e-05 24.4 2.0 3.7e-05 23.2 0.4 2.4 2 0 0 2 2 2 1 KH domain AAA_18 PF13238.1 gi|84489459|ref|YP_447691.1| - 5.4e-05 23.5 0.1 0.0004 20.6 0.0 2.6 3 0 0 3 3 1 1 AAA domain KH_2 PF07650.12 gi|84489459|ref|YP_447691.1| - 0.00018 20.9 1.6 0.00079 18.9 1.1 2.2 1 0 0 1 1 1 1 KH domain PIN_4 PF13638.1 gi|84489459|ref|YP_447691.1| - 0.00027 21.0 0.0 0.00087 19.3 0.0 2.0 1 1 0 1 1 1 1 PIN domain AAA_14 PF13173.1 gi|84489459|ref|YP_447691.1| - 0.00045 20.1 0.3 0.0023 17.8 0.0 2.3 3 0 0 3 3 2 1 AAA domain KH_4 PF13083.1 gi|84489459|ref|YP_447691.1| - 0.0013 18.2 0.8 0.012 15.2 0.1 2.6 2 0 0 2 2 2 1 KH domain AAA_33 PF13671.1 gi|84489459|ref|YP_447691.1| - 0.0016 18.3 0.0 0.015 15.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|84489459|ref|YP_447691.1| - 0.0019 17.3 0.0 0.0056 15.7 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_5 PF07728.9 gi|84489459|ref|YP_447691.1| - 0.0025 17.5 0.0 0.013 15.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.13 gi|84489459|ref|YP_447691.1| - 0.008 15.6 0.0 0.018 14.5 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family ABC_tran PF00005.22 gi|84489459|ref|YP_447691.1| - 0.011 16.0 0.0 0.05 13.9 0.0 2.1 2 1 0 2 2 1 0 ABC transporter AAA_29 PF13555.1 gi|84489459|ref|YP_447691.1| - 0.011 15.2 0.1 0.036 13.6 0.0 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|84489459|ref|YP_447691.1| - 0.011 15.0 0.0 0.038 13.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|84489459|ref|YP_447691.1| - 0.019 14.9 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|84489459|ref|YP_447691.1| - 0.02 14.6 0.0 0.056 13.2 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain AAA_30 PF13604.1 gi|84489459|ref|YP_447691.1| - 0.023 14.2 0.0 0.34 10.4 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|84489459|ref|YP_447691.1| - 0.028 14.5 0.0 0.079 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA PF00004.24 gi|84489459|ref|YP_447691.1| - 0.054 13.6 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|84489459|ref|YP_447691.1| - 0.062 13.4 0.1 0.29 11.3 0.0 2.2 2 0 0 2 2 2 0 RNA helicase VirE PF05272.6 gi|84489459|ref|YP_447691.1| - 0.07 12.5 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Virulence-associated protein E IstB_IS21 PF01695.12 gi|84489459|ref|YP_447691.1| - 0.076 12.4 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.1 gi|84489459|ref|YP_447691.1| - 0.093 12.7 0.0 0.34 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.1 gi|84489459|ref|YP_447691.1| - 0.11 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Viral_helicase1 PF01443.13 gi|84489459|ref|YP_447691.1| - 0.15 11.5 0.0 0.87 9.0 0.0 2.1 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AP_endonuc_2 PF01261.19 gi|84489460|ref|YP_447692.1| - 2.7e-21 75.8 0.2 3.3e-21 75.5 0.1 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel tRNA_int_endo PF01974.12 gi|84489461|ref|YP_447693.1| - 3.1e-30 103.7 1.3 3.9e-30 103.4 0.4 1.5 2 0 0 2 2 2 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|84489461|ref|YP_447693.1| - 1.2e-18 66.3 0.3 1.2e-18 66.3 0.2 1.6 2 0 0 2 2 2 1 tRNA intron endonuclease, N-terminal domain tRNA-synt_1b PF00579.20 gi|84489462|ref|YP_447694.1| - 1.6e-52 178.4 0.0 2e-52 178.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) CbiM PF01891.11 gi|84489464|ref|YP_447696.1| - 8.9e-58 195.2 19.8 1e-57 195.1 13.8 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region PSI_PSAK PF01241.13 gi|84489464|ref|YP_447696.1| - 0.045 13.7 2.1 0.25 11.3 1.4 2.3 1 1 0 1 1 1 0 Photosystem I psaG / psaK DUF4199 PF13858.1 gi|84489464|ref|YP_447696.1| - 1.1 9.2 19.5 0.55 10.1 5.8 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4199) DUF165 PF02592.10 gi|84489464|ref|YP_447696.1| - 1.7 8.7 8.4 0.29 11.2 1.1 2.3 1 1 0 2 2 2 0 Uncharacterized ACR, YhhQ family COG1738 DUF716 PF04819.7 gi|84489464|ref|YP_447696.1| - 2 7.8 8.3 8.4 5.8 0.3 3.0 2 1 1 3 3 3 0 Family of unknown function (DUF716) DUF3816 PF12822.2 gi|84489464|ref|YP_447696.1| - 4.2 7.2 32.1 2.8 7.7 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3816) PDGLE PF13190.1 gi|84489465|ref|YP_447697.1| - 2.4e-15 55.9 0.4 3e-15 55.6 0.3 1.1 1 0 0 1 1 1 1 PDGLE domain DUF441 PF04284.8 gi|84489465|ref|YP_447697.1| - 0.0011 18.8 0.0 0.0014 18.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF441) Yip1 PF04893.12 gi|84489465|ref|YP_447697.1| - 0.025 14.0 0.1 0.03 13.8 0.0 1.1 1 0 0 1 1 1 0 Yip1 domain OppC_N PF12911.2 gi|84489465|ref|YP_447697.1| - 0.035 13.4 3.0 0.11 11.9 0.0 2.2 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CbiQ PF02361.11 gi|84489466|ref|YP_447698.1| - 5.2e-40 137.3 15.8 5.2e-40 137.3 10.9 1.5 1 1 1 2 2 2 1 Cobalt transport protein Ni_hydr_CYTB PF01292.15 gi|84489466|ref|YP_447698.1| - 0.14 11.4 5.0 0.58 9.5 3.5 2.3 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 PMBR PF09373.5 gi|84489467|ref|YP_447699.1| - 5.7e-06 26.0 0.6 0.055 13.4 0.0 3.5 3 0 0 3 3 3 2 Pseudomurein-binding repeat LETM1 PF07766.8 gi|84489468|ref|YP_447700.1| - 0.0049 15.9 1.0 0.0052 15.8 0.7 1.0 1 0 0 1 1 1 1 LETM1-like protein DUF4549 PF15082.1 gi|84489468|ref|YP_447700.1| - 0.086 12.4 0.4 0.1 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4549) DUF2452 PF10504.4 gi|84489468|ref|YP_447700.1| - 0.087 12.0 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) SET_assoc PF11767.3 gi|84489468|ref|YP_447700.1| - 0.096 12.0 0.2 0.18 11.1 0.1 1.5 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated UFD1 PF03152.9 gi|84489468|ref|YP_447700.1| - 0.14 11.3 1.5 0.15 11.2 1.0 1.0 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 RNA_pol_Rpb1_5 PF04998.12 gi|84489468|ref|YP_447700.1| - 0.38 9.9 1.5 0.45 9.7 1.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 TGS PF02824.16 gi|84489469|ref|YP_447701.1| - 1.2e-21 76.2 0.1 2.1e-21 75.5 0.0 1.4 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.18 gi|84489469|ref|YP_447701.1| - 2e-21 76.0 0.6 6.4e-21 74.4 0.1 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|84489469|ref|YP_447701.1| - 1.2e-15 57.0 0.5 8e-14 51.1 0.0 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B Arf PF00025.16 gi|84489469|ref|YP_447701.1| - 0.00065 18.9 0.9 0.025 13.8 0.1 2.7 1 1 1 2 2 2 1 ADP-ribosylation factor family Dynamin_N PF00350.18 gi|84489469|ref|YP_447701.1| - 0.00093 19.0 3.4 0.85 9.4 0.0 3.3 2 1 1 3 3 3 2 Dynamin family DUF258 PF03193.11 gi|84489469|ref|YP_447701.1| - 0.008 15.3 0.1 0.016 14.3 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function, DUF258 Miro PF08477.8 gi|84489469|ref|YP_447701.1| - 0.032 14.7 0.9 0.22 12.0 0.0 2.7 3 1 0 3 3 2 0 Miro-like protein GTP_EFTU PF00009.22 gi|84489469|ref|YP_447701.1| - 0.04 13.3 0.9 1.7 8.0 0.0 3.1 2 1 1 3 3 3 0 Elongation factor Tu GTP binding domain AAA_16 PF13191.1 gi|84489469|ref|YP_447701.1| - 0.043 13.7 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.1 gi|84489469|ref|YP_447701.1| - 0.044 14.1 0.2 0.21 11.8 0.0 2.3 1 1 1 2 2 2 0 AAA domain DUF2325 PF10087.4 gi|84489469|ref|YP_447701.1| - 0.057 13.2 0.8 0.53 10.1 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) DUF31 PF01732.11 gi|84489469|ref|YP_447701.1| - 0.071 12.4 0.2 0.1 11.8 0.1 1.3 1 0 0 1 1 1 0 Putative peptidase (DUF31) TMPIT PF07851.8 gi|84489469|ref|YP_447701.1| - 0.074 12.1 0.2 0.1 11.6 0.1 1.2 1 0 0 1 1 1 0 TMPIT-like protein cobW PF02492.14 gi|84489469|ref|YP_447701.1| - 0.093 12.1 2.3 6.8 6.0 0.0 3.2 2 1 1 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain DUF4404 PF14357.1 gi|84489469|ref|YP_447701.1| - 0.13 12.6 1.0 6.1 7.3 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Atg14 PF10186.4 gi|84489469|ref|YP_447701.1| - 0.54 9.1 2.5 0.99 8.2 1.8 1.3 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Tropomyosin_1 PF12718.2 gi|84489469|ref|YP_447701.1| - 0.6 9.9 5.9 0.17 11.7 2.1 1.5 2 0 0 2 2 2 0 Tropomyosin like DUF465 PF04325.8 gi|84489469|ref|YP_447701.1| - 3.9 7.2 9.1 1.7 8.3 3.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF465) MAF_flag10 PF01973.13 gi|84489470|ref|YP_447702.1| - 2.7e-39 134.4 3.2 3.8e-39 133.9 2.2 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.11 gi|84489470|ref|YP_447702.1| - 0.0073 15.8 0.0 0.24 10.9 0.0 2.4 2 0 0 2 2 2 1 Thiamin pyrophosphokinase, catalytic domain Cas_Cas6 PF01881.11 gi|84489470|ref|YP_447702.1| - 0.016 15.4 0.4 0.016 15.4 0.3 1.8 2 0 0 2 2 2 0 CRISPR associated protein Cas6 DUF4065 PF13274.1 gi|84489470|ref|YP_447702.1| - 0.53 11.0 3.6 1.6 9.4 2.5 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Aminotran_5 PF00266.14 gi|84489471|ref|YP_447703.1| - 2e-39 135.4 0.0 2.5e-39 135.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|84489471|ref|YP_447703.1| - 2.9e-07 29.1 0.1 5e-07 28.3 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Ammonium_transp PF00909.16 gi|84489472|ref|YP_447704.1| - 4.6e-128 427.0 38.2 5.2e-128 426.9 26.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.17 gi|84489473|ref|YP_447705.1| - 1.1e-35 122.1 2.5 1.3e-35 121.9 1.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PrmA PF06325.8 gi|84489473|ref|YP_447705.1| - 0.0064 15.6 0.0 0.0072 15.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) F420_oxidored PF03807.12 gi|84489474|ref|YP_447706.1| - 3.6e-16 59.3 0.4 6.4e-16 58.5 0.0 1.6 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.7 gi|84489474|ref|YP_447706.1| - 9.4e-05 21.8 0.1 0.00038 19.8 0.1 1.9 2 1 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain ApbA PF02558.11 gi|84489474|ref|YP_447706.1| - 0.0045 16.4 0.0 0.007 15.8 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.18 gi|84489474|ref|YP_447706.1| - 0.016 14.9 0.0 0.034 13.8 0.0 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|84489474|ref|YP_447706.1| - 0.052 13.5 0.0 0.13 12.2 0.0 1.6 2 0 0 2 2 2 0 NADH(P)-binding Semialdhyde_dh PF01118.19 gi|84489474|ref|YP_447706.1| - 0.1 12.8 0.1 0.59 10.4 0.0 2.0 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain P-II PF00543.17 gi|84489475|ref|YP_447707.1| - 2.1e-35 121.2 3.9 2.3e-35 121.1 2.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Glu_synthase PF01645.12 gi|84489476|ref|YP_447708.1| - 1.2e-124 415.9 5.4 1.9e-124 415.3 3.7 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|84489476|ref|YP_447708.1| - 4.8e-14 51.9 12.7 1.2e-12 47.3 3.7 3.1 2 1 0 3 3 3 1 FMN-dependent dehydrogenase NMO PF03060.10 gi|84489476|ref|YP_447708.1| - 4.8e-11 42.3 11.8 1.2e-10 41.0 8.2 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase Fer4 PF00037.22 gi|84489476|ref|YP_447708.1| - 1.8e-08 33.6 20.9 4.8e-07 29.0 2.4 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489476|ref|YP_447708.1| - 5.6e-08 33.0 15.4 5.8e-07 29.7 6.4 2.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489476|ref|YP_447708.1| - 7.1e-08 32.1 11.6 7.1e-08 32.1 8.0 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489476|ref|YP_447708.1| - 1.4e-07 31.6 21.8 2.1e-07 31.1 9.7 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489476|ref|YP_447708.1| - 3.9e-06 27.5 14.4 0.00084 20.0 0.5 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|84489476|ref|YP_447708.1| - 4.2e-06 26.4 18.8 0.00039 20.1 9.7 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain IMPDH PF00478.20 gi|84489476|ref|YP_447708.1| - 5.3e-06 25.5 6.2 5.3e-06 25.5 4.3 3.1 4 0 0 4 4 4 1 IMP dehydrogenase / GMP reductase domain Fer4_17 PF13534.1 gi|84489476|ref|YP_447708.1| - 0.00099 19.4 22.2 0.026 14.8 1.0 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489476|ref|YP_447708.1| - 0.0014 18.6 20.5 0.079 13.0 2.0 3.3 2 1 2 4 4 4 3 4Fe-4S dicluster domain His_biosynth PF00977.16 gi|84489476|ref|YP_447708.1| - 0.0018 17.6 1.3 0.002 17.4 0.1 1.6 2 0 0 2 2 2 1 Histidine biosynthesis protein Glu_syn_central PF04898.9 gi|84489476|ref|YP_447708.1| - 0.0023 17.2 0.8 0.46 9.6 0.1 2.3 2 0 0 2 2 2 1 Glutamate synthase central domain DHO_dh PF01180.16 gi|84489476|ref|YP_447708.1| - 0.003 16.5 1.1 0.0047 15.9 0.8 1.4 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Fer4_6 PF12837.2 gi|84489476|ref|YP_447708.1| - 0.0032 17.2 24.5 0.015 15.1 1.3 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489476|ref|YP_447708.1| - 0.0053 16.6 3.4 0.0053 16.6 2.4 3.7 3 0 0 3 3 3 1 4Fe-4S binding domain QRPTase_C PF01729.14 gi|84489476|ref|YP_447708.1| - 0.042 13.3 0.1 0.073 12.5 0.1 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Fer4_4 PF12800.2 gi|84489476|ref|YP_447708.1| - 0.08 13.3 24.9 0.13 12.6 2.7 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain PcrB PF01884.12 gi|84489476|ref|YP_447708.1| - 0.18 10.9 5.6 0.45 9.7 0.7 2.6 1 1 1 2 2 2 0 PcrB family Fer4_15 PF13459.1 gi|84489476|ref|YP_447708.1| - 4.5 7.9 11.9 3.6 8.2 0.9 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain FrhB_FdhB_C PF04432.8 gi|84489477|ref|YP_447709.1| - 2.4e-43 147.3 0.2 2.4e-43 147.3 0.1 2.0 1 1 1 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|84489477|ref|YP_447709.1| - 1e-18 66.9 0.1 3.8e-18 65.1 0.0 2.0 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.1 gi|84489477|ref|YP_447709.1| - 3.3e-06 27.0 2.5 0.00083 19.3 0.0 3.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489477|ref|YP_447709.1| - 1.6e-05 24.6 7.3 1.6e-05 24.6 5.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84489477|ref|YP_447709.1| - 6.2e-05 22.4 4.6 6.2e-05 22.4 3.2 3.7 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84489477|ref|YP_447709.1| - 9.9e-05 22.5 10.8 9.9e-05 22.5 7.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489477|ref|YP_447709.1| - 0.0002 21.1 3.4 0.0002 21.1 2.4 3.2 4 0 0 4 4 3 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84489477|ref|YP_447709.1| - 0.00027 21.2 6.4 0.0007 19.8 0.1 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489477|ref|YP_447709.1| - 0.001 19.4 9.9 0.001 19.4 6.9 2.5 2 1 1 3 3 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489477|ref|YP_447709.1| - 0.0016 18.2 3.1 0.0016 18.2 2.2 3.2 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489477|ref|YP_447709.1| - 0.0035 17.1 8.2 0.0035 17.1 5.7 2.3 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489477|ref|YP_447709.1| - 0.0053 17.4 9.5 0.31 11.7 1.9 3.4 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|84489477|ref|YP_447709.1| - 0.022 15.1 1.4 0.022 15.1 1.0 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489477|ref|YP_447709.1| - 0.3 11.5 16.5 0.12 12.7 2.2 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain GXGXG PF01493.14 gi|84489478|ref|YP_447710.1| - 2e-33 115.0 14.5 2.4e-33 114.8 10.0 1.1 1 0 0 1 1 1 1 GXGXG motif MinC_C PF03775.11 gi|84489478|ref|YP_447710.1| - 0.85 9.2 6.1 0.8 9.3 0.1 2.6 1 1 1 2 2 2 0 Septum formation inhibitor MinC, C-terminal domain GATase_2 PF00310.16 gi|84489479|ref|YP_447711.1| - 2.6e-23 82.3 0.0 6.5e-14 51.4 0.0 3.0 2 1 0 2 2 2 2 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|84489479|ref|YP_447711.1| - 2.8e-20 72.6 0.0 4.2e-20 72.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|84489479|ref|YP_447711.1| - 1.3e-18 66.9 0.0 2.5e-18 65.9 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.1 gi|84489479|ref|YP_447711.1| - 0.00016 20.4 0.0 0.00027 19.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II SNO PF01174.14 gi|84489480|ref|YP_447712.1| - 9.7e-51 172.0 0.1 1.1e-50 171.8 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|84489480|ref|YP_447712.1| - 1.3e-08 34.5 0.0 2e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|84489480|ref|YP_447712.1| - 0.00014 21.4 0.2 0.00021 20.9 0.0 1.5 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.12 gi|84489480|ref|YP_447712.1| - 0.0051 16.5 0.1 0.0075 16.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S51 Peptidase_C26 PF07722.8 gi|84489480|ref|YP_447712.1| - 0.0066 15.9 0.3 0.23 10.8 0.2 2.8 1 1 0 1 1 1 1 Peptidase C26 Aconitase PF00330.15 gi|84489480|ref|YP_447712.1| - 0.045 12.2 0.0 0.057 11.8 0.0 1.1 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) DUF4066 PF13278.1 gi|84489480|ref|YP_447712.1| - 0.14 11.3 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Putative amidotransferase Ldh_1_N PF00056.18 gi|84489481|ref|YP_447713.1| - 8.9e-38 129.2 0.3 1.3e-37 128.7 0.2 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|84489481|ref|YP_447713.1| - 2.9e-28 98.7 0.0 4.5e-28 98.1 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Semialdhyde_dh PF01118.19 gi|84489481|ref|YP_447713.1| - 0.01 16.1 0.2 0.027 14.7 0.0 1.8 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Glyco_hydro_4 PF02056.11 gi|84489481|ref|YP_447713.1| - 0.041 13.1 0.0 0.093 12.0 0.0 1.7 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase adh_short PF00106.20 gi|84489481|ref|YP_447713.1| - 0.066 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase DapB_N PF01113.15 gi|84489481|ref|YP_447713.1| - 0.082 12.8 0.0 0.16 11.8 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus HEAT_2 PF13646.1 gi|84489482|ref|YP_447714.1| - 2.5e-23 82.1 0.0 2.8e-15 56.3 0.0 2.5 1 1 1 2 2 2 2 HEAT repeats HEAT_PBS PF03130.11 gi|84489482|ref|YP_447714.1| - 1e-13 50.3 0.0 0.0078 16.5 0.0 4.3 4 0 0 4 4 4 3 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|84489482|ref|YP_447714.1| - 2.6e-12 45.7 0.0 0.00084 19.2 0.0 4.7 4 1 2 6 6 6 3 HEAT repeat HEAT_EZ PF13513.1 gi|84489482|ref|YP_447714.1| - 1e-08 35.4 0.0 0.00013 22.2 0.1 3.6 3 1 1 4 4 4 2 HEAT-like repeat DNA_alkylation PF08713.6 gi|84489482|ref|YP_447714.1| - 0.00073 19.1 0.2 0.0011 18.5 0.1 1.3 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF2435 PF10363.4 gi|84489482|ref|YP_447714.1| - 0.065 13.1 0.0 5.2 7.0 0.0 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF2435) Iso_dh PF00180.15 gi|84489483|ref|YP_447715.1| - 2.1e-101 339.3 0.1 2.6e-101 339.0 0.1 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase FBPase_3 PF01950.11 gi|84489484|ref|YP_447716.1| - 3e-189 628.5 0.0 3.4e-189 628.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Phage_sheath_1 PF04984.9 gi|84489484|ref|YP_447716.1| - 0.1 11.0 0.0 6.2 5.1 0.0 2.1 2 0 0 2 2 2 0 Phage tail sheath protein CBS PF00571.23 gi|84489485|ref|YP_447717.1| - 3.4e-31 106.7 1.0 4.9e-15 55.0 0.1 3.4 3 0 0 3 3 3 2 CBS domain Abhydrolase_1 PF00561.15 gi|84489485|ref|YP_447717.1| - 4.6e-26 91.7 0.0 6.2e-26 91.3 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.2 gi|84489485|ref|YP_447717.1| - 4.1e-09 36.6 0.0 6.7e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|84489485|ref|YP_447717.1| - 0.0031 17.2 0.0 0.022 14.5 0.0 2.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.15 gi|84489485|ref|YP_447717.1| - 0.0051 16.2 0.0 0.0079 15.6 0.0 1.3 1 0 0 1 1 1 1 Putative esterase DUF2977 PF11192.3 gi|84489485|ref|YP_447717.1| - 6.2 6.7 7.5 90 3.0 0.2 4.0 3 1 1 4 4 4 0 Protein of unknown function (DUF2977) Cys_Met_Meta_PP PF01053.15 gi|84489486|ref|YP_447718.1| - 1.3e-139 464.8 0.0 1.4e-139 464.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|84489486|ref|YP_447718.1| - 2.7e-13 49.7 0.0 4.5e-13 48.9 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|84489486|ref|YP_447718.1| - 2e-07 30.1 0.1 1.5e-06 27.2 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|84489486|ref|YP_447718.1| - 4.8e-06 25.7 0.0 7.2e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.6 gi|84489486|ref|YP_447718.1| - 0.0051 15.1 0.1 0.0093 14.3 0.1 1.5 1 0 0 1 1 1 1 Methionine gamma-lyase Beta_elim_lyase PF01212.16 gi|84489486|ref|YP_447718.1| - 0.065 12.3 0.0 0.18 10.8 0.0 1.8 1 1 0 1 1 1 0 Beta-eliminating lyase E1-E2_ATPase PF00122.15 gi|84489487|ref|YP_447719.1| - 2.5e-49 167.3 1.9 2.5e-49 167.3 1.3 2.3 3 1 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|84489487|ref|YP_447719.1| - 1.4e-39 136.7 0.0 2.2e-39 136.1 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|84489487|ref|YP_447719.1| - 1.5e-11 44.8 0.0 2.8e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|84489487|ref|YP_447719.1| - 6.5e-05 22.6 2.7 6.5e-05 22.6 1.8 2.5 3 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase CBS PF00571.23 gi|84489487|ref|YP_447719.1| - 0.016 14.9 0.1 0.054 13.2 0.1 2.0 1 0 0 1 1 1 0 CBS domain Acetyltransf_4 PF13420.1 gi|84489487|ref|YP_447719.1| - 0.036 14.0 0.1 0.064 13.2 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3100 PF11299.3 gi|84489488|ref|YP_447720.1| - 4.5e-91 304.3 19.2 5.3e-91 304.1 13.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3100) DUF485 PF04341.7 gi|84489488|ref|YP_447720.1| - 1.3 8.7 5.9 0.39 10.4 0.3 2.9 2 2 0 2 2 2 0 Protein of unknown function, DUF485 DUF3100 PF11299.3 gi|84489490|ref|YP_447722.1| - 9.6e-87 290.1 20.8 1.1e-86 289.9 14.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3100) DUF1980 PF09323.5 gi|84489490|ref|YP_447722.1| - 1.3 8.7 15.1 0.67 9.6 1.6 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Phlebovirus_G1 PF07243.6 gi|84489490|ref|YP_447722.1| - 5.2 5.0 5.9 8.9 4.3 4.1 1.3 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF1230 PF06799.6 gi|84489490|ref|YP_447722.1| - 9.9 6.0 8.2 5.3 6.9 1.3 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1230) HK PF02110.10 gi|84489491|ref|YP_447723.1| - 2e-73 246.5 6.2 2.4e-73 246.3 4.3 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Carb_kinase PF01256.12 gi|84489491|ref|YP_447723.1| - 9.5e-09 34.8 1.9 1.9e-08 33.8 1.3 1.4 1 1 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.7 gi|84489491|ref|YP_447723.1| - 4.5e-05 22.7 0.6 8.1e-05 21.9 0.4 1.5 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase RRF PF01765.14 gi|84489491|ref|YP_447723.1| - 0.031 13.7 0.1 0.047 13.1 0.1 1.4 1 0 0 1 1 1 0 Ribosome recycling factor TMP_2 PF06791.8 gi|84489491|ref|YP_447723.1| - 0.1 12.2 0.5 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Prophage tail length tape measure protein ADP_ribosyl_GH PF03747.9 gi|84489492|ref|YP_447724.1| - 1.6e-66 225.0 0.0 2.1e-66 224.6 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase TMP-TENI PF02581.12 gi|84489492|ref|YP_447724.1| - 1.8e-61 206.4 0.4 3.1e-61 205.6 0.3 1.4 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI Oxidored_FMN PF00724.15 gi|84489492|ref|YP_447724.1| - 0.075 12.0 0.0 0.14 11.0 0.0 1.4 1 0 0 1 1 1 0 NADH:flavin oxidoreductase / NADH oxidase family DUF2129 PF09902.4 gi|84489493|ref|YP_447725.1| - 0.05 13.3 1.6 0.092 12.5 1.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) Flavodoxin_1 PF00258.20 gi|84489494|ref|YP_447726.1| - 0.1 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Flavodoxin Barstar PF01337.13 gi|84489496|ref|YP_447728.1| - 4.6e-13 48.8 0.0 5.6e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 Barstar (barnase inhibitor) Ribonuclease PF00545.15 gi|84489497|ref|YP_447729.1| - 1.1e-19 70.2 0.7 1.6e-19 69.7 0.5 1.2 1 0 0 1 1 1 1 ribonuclease DUF4021 PF13213.1 gi|84489497|ref|YP_447729.1| - 0.24 11.0 1.8 0.45 10.1 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4021) CarboxypepD_reg PF13620.1 gi|84489498|ref|YP_447730.1| - 0.044 13.8 2.7 0.049 13.6 1.2 1.5 2 0 0 2 2 2 0 Carboxypeptidase regulatory-like domain DUF1842 PF08896.5 gi|84489498|ref|YP_447730.1| - 0.047 13.4 0.2 0.093 12.4 0.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1842) DUF917 PF06032.7 gi|84489498|ref|YP_447730.1| - 0.077 11.5 0.2 0.097 11.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF917) Mucin PF01456.12 gi|84489499|ref|YP_447731.1| - 8.4e-05 22.3 4.0 0.0001 22.1 2.8 1.1 1 0 0 1 1 1 1 Mucin-like glycoprotein DUF4407 PF14362.1 gi|84489499|ref|YP_447731.1| - 0.00011 21.2 0.7 0.00014 20.9 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF1510 PF07423.6 gi|84489499|ref|YP_447731.1| - 0.0027 17.1 1.8 0.0038 16.6 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) DUF948 PF06103.6 gi|84489499|ref|YP_447731.1| - 0.0028 17.4 0.8 0.0059 16.4 0.5 1.5 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF948) UPF0118 PF01594.11 gi|84489499|ref|YP_447731.1| - 0.0039 16.2 0.1 0.0041 16.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 T2SM PF04612.7 gi|84489499|ref|YP_447731.1| - 0.0052 16.6 0.0 0.0062 16.3 0.0 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M MHC2-interact PF09307.5 gi|84489499|ref|YP_447731.1| - 0.0052 16.5 0.5 0.0061 16.3 0.4 1.1 1 0 0 1 1 1 1 CLIP, MHC2 interacting DMAP1 PF05499.7 gi|84489499|ref|YP_447731.1| - 0.0062 16.1 0.3 0.0076 15.8 0.2 1.0 1 0 0 1 1 1 1 DNA methyltransferase 1-associated protein 1 (DMAP1) zf-ribbon_3 PF13248.1 gi|84489499|ref|YP_447731.1| - 0.0063 15.6 1.0 0.014 14.6 0.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DUF4363 PF14276.1 gi|84489499|ref|YP_447731.1| - 0.0072 16.0 0.5 0.0097 15.6 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) FlxA PF14282.1 gi|84489499|ref|YP_447731.1| - 0.0073 16.2 8.8 0.0092 15.9 6.1 1.1 1 0 0 1 1 1 1 FlxA-like protein DUF3138 PF11336.3 gi|84489499|ref|YP_447731.1| - 0.0096 14.1 0.3 0.011 13.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3138) DivIVA PF05103.8 gi|84489499|ref|YP_447731.1| - 0.017 15.1 4.4 0.021 14.8 3.1 1.1 1 0 0 1 1 1 0 DivIVA protein DUF3810 PF12725.2 gi|84489499|ref|YP_447731.1| - 0.018 13.9 0.6 0.02 13.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Peptidase_S49_N PF08496.5 gi|84489499|ref|YP_447731.1| - 0.021 14.6 1.1 0.024 14.4 0.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4446 PF14584.1 gi|84489499|ref|YP_447731.1| - 0.022 14.5 0.1 0.03 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) zinc_ribbon_2 PF13240.1 gi|84489499|ref|YP_447731.1| - 0.026 14.0 0.5 0.064 12.7 0.4 1.6 1 0 0 1 1 1 0 zinc-ribbon domain IgaA PF07095.6 gi|84489499|ref|YP_447731.1| - 0.03 12.0 0.3 0.032 11.9 0.2 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Spc24 PF08286.6 gi|84489499|ref|YP_447731.1| - 0.03 14.0 2.7 0.038 13.6 1.9 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 MSC PF09402.5 gi|84489499|ref|YP_447731.1| - 0.035 12.8 0.5 0.042 12.5 0.3 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain SoxE PF06525.6 gi|84489499|ref|YP_447731.1| - 0.038 13.2 1.2 0.048 12.9 0.9 1.1 1 0 0 1 1 1 0 Sulfocyanin (SoxE) Inhibitor_I53 PF11714.3 gi|84489499|ref|YP_447731.1| - 0.05 13.6 0.1 0.067 13.1 0.1 1.3 1 0 0 1 1 1 0 Thrombin inhibitor Madanin TMCO5 PF14992.1 gi|84489499|ref|YP_447731.1| - 0.051 12.6 3.4 0.065 12.3 2.3 1.1 1 0 0 1 1 1 0 TMCO5 family DUF2681 PF10883.3 gi|84489499|ref|YP_447731.1| - 0.057 13.6 1.3 0.086 13.0 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DUF3139 PF11337.3 gi|84489499|ref|YP_447731.1| - 0.06 13.6 1.5 0.11 12.7 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) DZR PF12773.2 gi|84489499|ref|YP_447731.1| - 0.077 12.8 1.4 0.17 11.7 1.0 1.6 1 0 0 1 1 1 0 Double zinc ribbon AIP3 PF03915.8 gi|84489499|ref|YP_447731.1| - 0.085 11.7 2.8 0.1 11.4 2.0 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 7TM_GPCR_Str PF10326.4 gi|84489499|ref|YP_447731.1| - 0.097 11.7 0.4 0.14 11.3 0.3 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str Gti1_Pac2 PF09729.4 gi|84489499|ref|YP_447731.1| - 0.12 12.2 2.6 0.15 11.9 1.8 1.1 1 0 0 1 1 1 0 Gti1/Pac2 family Baculo_p24 PF05073.7 gi|84489499|ref|YP_447731.1| - 0.13 11.8 2.6 0.16 11.5 1.8 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Herpes_UL25 PF01499.11 gi|84489499|ref|YP_447731.1| - 0.13 10.5 1.6 0.16 10.2 1.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family FliD_N PF02465.13 gi|84489499|ref|YP_447731.1| - 0.14 12.5 9.4 0.18 12.1 6.5 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF4381 PF14316.1 gi|84489499|ref|YP_447731.1| - 0.14 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF4307 PF14155.1 gi|84489499|ref|YP_447731.1| - 0.16 11.7 1.5 0.26 11.0 0.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4307) Nucleoside_tran PF01733.13 gi|84489499|ref|YP_447731.1| - 0.2 10.8 0.5 0.24 10.5 0.4 1.0 1 0 0 1 1 1 0 Nucleoside transporter NVEALA PF14055.1 gi|84489499|ref|YP_447731.1| - 0.44 10.2 2.5 0.26 11.0 0.3 1.8 2 0 0 2 2 1 0 NVEALA protein Tetraspannin PF00335.15 gi|84489499|ref|YP_447731.1| - 0.62 9.3 4.2 0.83 8.8 2.9 1.4 1 1 0 1 1 1 0 Tetraspanin family DUF2500 PF10694.4 gi|84489499|ref|YP_447731.1| - 0.7 9.9 3.6 1.8 8.6 2.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2500) RICH PF05062.7 gi|84489499|ref|YP_447731.1| - 1.1 9.4 6.6 1.6 8.9 4.6 1.2 1 0 0 1 1 1 0 RICH domain Chordopox_A13L PF05961.6 gi|84489499|ref|YP_447731.1| - 2 8.4 4.9 5.6 6.9 3.4 1.9 1 1 0 1 1 1 0 Chordopoxvirus A13L protein YtxH PF12732.2 gi|84489499|ref|YP_447731.1| - 2 8.8 5.1 2.8 8.3 3.6 1.2 1 0 0 1 1 1 0 YtxH-like protein DUF2802 PF10975.3 gi|84489499|ref|YP_447731.1| - 2.2 8.1 5.7 4.9 6.9 4.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2802) Fib_alpha PF08702.5 gi|84489499|ref|YP_447731.1| - 3 7.9 14.0 0.19 11.8 6.2 1.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family SNF PF00209.13 gi|84489500|ref|YP_447732.1| - 1.3e-90 304.4 51.2 8.7e-58 196.0 19.5 2.0 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family Tetraspannin PF00335.15 gi|84489501|ref|YP_447733.1| - 0.02 14.1 1.1 0.026 13.8 0.8 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF3217 PF11506.3 gi|84489501|ref|YP_447733.1| - 0.036 13.7 0.6 0.14 11.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3217) DHOase PF12890.2 gi|84489501|ref|YP_447733.1| - 0.079 12.6 1.0 1.9 8.1 0.1 2.1 1 1 1 2 2 2 0 Dihydro-orotase-like ABC2_membrane_3 PF12698.2 gi|84489501|ref|YP_447733.1| - 0.081 11.9 8.6 0.094 11.7 6.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Cofilin_ADF PF00241.15 gi|84489501|ref|YP_447733.1| - 0.12 12.2 2.5 0.14 12.0 0.8 1.7 1 1 1 2 2 2 0 Cofilin/tropomyosin-type actin-binding protein YaaC PF14175.1 gi|84489501|ref|YP_447733.1| - 0.19 10.6 5.1 0.23 10.3 3.5 1.1 1 0 0 1 1 1 0 YaaC-like Protein DUF1628 PF07790.6 gi|84489501|ref|YP_447733.1| - 0.79 10.5 3.1 5.9 7.7 2.2 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) DUF77 PF01910.12 gi|84489502|ref|YP_447734.1| - 6.4e-30 102.6 0.0 7.1e-30 102.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF77 DUF826 PF05696.6 gi|84489502|ref|YP_447734.1| - 0.089 12.9 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF826) HK PF02110.10 gi|84489503|ref|YP_447735.1| - 3.6e-69 232.6 7.2 4.2e-69 232.4 5.0 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 gi|84489503|ref|YP_447735.1| - 2.8e-07 30.0 2.8 4.1e-07 29.4 1.9 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.12 gi|84489503|ref|YP_447735.1| - 3.3e-06 26.5 2.8 7.6e-06 25.3 2.0 1.5 1 1 0 1 1 1 1 Carbohydrate kinase PyrI PF01948.13 gi|84489503|ref|YP_447735.1| - 0.17 11.8 6.1 0.36 10.8 4.2 1.5 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, allosteric domain PrgI PF12666.2 gi|84489504|ref|YP_447736.1| - 0.013 15.5 2.3 0.013 15.5 0.5 1.7 2 0 0 2 2 2 0 PrgI family protein Sulfate_transp PF00916.15 gi|84489504|ref|YP_447736.1| - 0.11 11.5 2.5 0.066 12.2 0.9 1.4 1 1 0 1 1 1 0 Sulfate transporter family MNHE PF01899.11 gi|84489504|ref|YP_447736.1| - 0.13 11.9 0.2 0.2 11.2 0.2 1.3 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit DUF4396 PF14342.1 gi|84489504|ref|YP_447736.1| - 0.13 12.3 0.9 0.13 12.3 0.1 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) DUF4418 PF14387.1 gi|84489504|ref|YP_447736.1| - 0.16 11.7 2.0 0.3 10.8 1.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) Wzy_C PF04932.10 gi|84489504|ref|YP_447736.1| - 0.35 10.6 4.1 0.22 11.2 1.2 1.7 2 0 0 2 2 2 0 O-Antigen ligase Yip1 PF04893.12 gi|84489504|ref|YP_447736.1| - 0.58 9.6 5.5 5.1 6.5 3.8 2.1 1 1 0 1 1 1 0 Yip1 domain DUF4199 PF13858.1 gi|84489504|ref|YP_447736.1| - 0.69 9.8 8.5 1.8 8.4 1.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) FixQ PF05545.6 gi|84489504|ref|YP_447736.1| - 1 9.0 0.0 1 9.0 0.0 2.3 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DUF3487 PF11990.3 gi|84489504|ref|YP_447736.1| - 1.8 7.9 6.0 0.17 11.3 1.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Usp PF00582.21 gi|84489505|ref|YP_447737.1| - 2.3e-30 105.5 0.2 2.6e-30 105.4 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family IlvN PF07991.7 gi|84489505|ref|YP_447737.1| - 0.0029 17.0 0.4 0.0035 16.7 0.3 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain DUF1034 PF06280.7 gi|84489505|ref|YP_447737.1| - 0.076 13.4 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Fn3-like domain (DUF1034) Adenine_glyco PF03352.8 gi|84489506|ref|YP_447738.1| - 4.6e-67 225.0 0.7 5.3e-67 224.8 0.5 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase RNA_pol_Rpb1_5 PF04998.12 gi|84489506|ref|YP_447738.1| - 0.03 13.6 0.8 0.036 13.3 0.5 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 GSH-S_ATP PF02955.11 gi|84489506|ref|YP_447738.1| - 0.039 13.1 0.0 0.069 12.2 0.0 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain DUF1978 PF09321.5 gi|84489507|ref|YP_447739.1| - 0.0083 15.5 8.0 0.01 15.3 5.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1978) DUF1664 PF07889.7 gi|84489507|ref|YP_447739.1| - 0.022 14.5 5.2 0.049 13.4 3.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4164 PF13747.1 gi|84489507|ref|YP_447739.1| - 0.038 14.1 0.4 0.076 13.1 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Prefoldin_2 PF01920.15 gi|84489507|ref|YP_447739.1| - 0.074 12.8 6.4 0.25 11.1 4.0 1.9 1 1 0 1 1 1 0 Prefoldin subunit Herpes_U30 PF04523.8 gi|84489507|ref|YP_447739.1| - 0.08 10.3 2.2 0.11 9.9 1.5 1.1 1 0 0 1 1 1 0 Herpes virus tegument protein U30 PMC2NT PF08066.7 gi|84489507|ref|YP_447739.1| - 0.08 13.2 4.7 0.19 12.0 3.3 1.7 1 0 0 1 1 1 0 PMC2NT (NUC016) domain DUF869 PF05911.6 gi|84489507|ref|YP_447739.1| - 0.14 10.3 10.3 0.16 10.1 7.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF869) Lge1 PF11488.3 gi|84489507|ref|YP_447739.1| - 0.27 11.4 5.2 5.1 7.3 0.8 3.1 1 1 1 2 2 2 0 Transcriptional regulatory protein LGE1 Baculo_PEP_C PF04513.7 gi|84489507|ref|YP_447739.1| - 0.36 10.6 9.6 0.18 11.6 4.8 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Seryl_tRNA_N PF02403.17 gi|84489507|ref|YP_447739.1| - 0.41 10.6 10.0 0.42 10.6 5.9 1.8 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LOH1CR12 PF10158.4 gi|84489507|ref|YP_447739.1| - 0.5 10.1 5.6 1 9.1 3.9 1.5 1 0 0 1 1 1 0 Tumour suppressor protein Nsp1_C PF05064.8 gi|84489507|ref|YP_447739.1| - 0.6 9.7 7.8 1.5 8.4 4.2 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region NPV_P10 PF05531.7 gi|84489507|ref|YP_447739.1| - 1.3 9.3 10.8 0.34 11.1 3.9 2.7 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.4 gi|84489507|ref|YP_447739.1| - 1.8 8.7 16.4 1.2 9.3 7.7 2.9 2 2 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MCPsignal PF00015.16 gi|84489507|ref|YP_447739.1| - 2.3 7.7 6.9 1.1 8.7 2.3 2.0 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Jnk-SapK_ap_N PF09744.4 gi|84489507|ref|YP_447739.1| - 3.6 7.5 14.5 0.41 10.6 6.6 1.8 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 zf-C4H2 PF10146.4 gi|84489507|ref|YP_447739.1| - 4.2 7.3 8.0 7 6.5 5.5 1.4 1 0 0 1 1 1 0 Zinc finger-containing protein UPF0147 PF03685.8 gi|84489507|ref|YP_447739.1| - 6 6.8 8.1 3.6 7.5 0.4 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0147) DUF948 PF06103.6 gi|84489507|ref|YP_447739.1| - 6.3 6.7 8.5 5 7.0 1.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HHH_3 PF12836.2 gi|84489508|ref|YP_447740.1| - 8.9e-14 51.1 1.6 2.8e-13 49.6 0.1 2.5 2 1 0 2 2 2 1 Helix-hairpin-helix motif DUF3186 PF11382.3 gi|84489508|ref|YP_447740.1| - 0.031 13.3 1.0 0.045 12.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3186) HHH PF00633.18 gi|84489508|ref|YP_447740.1| - 0.086 12.5 0.0 0.22 11.3 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_6 PF14579.1 gi|84489508|ref|YP_447740.1| - 0.11 12.5 0.2 14 5.8 0.0 2.7 3 0 0 3 3 3 0 Helix-hairpin-helix motif DUF947 PF06102.7 gi|84489508|ref|YP_447740.1| - 4.3 7.1 14.1 11 5.7 6.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF947) HAD_2 PF13419.1 gi|84489509|ref|YP_447741.1| - 3.4e-14 53.4 0.1 1.1e-13 51.7 0.0 1.7 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|84489509|ref|YP_447741.1| - 9.2e-10 38.1 0.0 1.9e-09 37.0 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|84489509|ref|YP_447741.1| - 5.4e-06 26.6 0.2 9.4e-06 25.9 0.2 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|84489509|ref|YP_447741.1| - 9.9e-06 26.1 0.1 0.0031 17.9 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase PNK3P PF08645.6 gi|84489509|ref|YP_447741.1| - 6.7e-05 22.3 1.6 0.00064 19.1 1.1 2.2 1 1 0 1 1 1 1 Polynucleotide kinase 3 phosphatase NIF PF03031.13 gi|84489509|ref|YP_447741.1| - 0.0013 18.3 0.6 0.0047 16.6 0.4 1.8 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase Put_Phosphatase PF06888.7 gi|84489509|ref|YP_447741.1| - 0.0064 15.6 0.4 0.066 12.3 0.1 2.0 2 0 0 2 2 2 1 Putative Phosphatase Hydrolase_6 PF13344.1 gi|84489509|ref|YP_447741.1| - 0.084 12.7 0.0 0.6 10.0 0.0 2.4 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|84489509|ref|YP_447741.1| - 0.14 11.6 6.7 0.31 10.5 0.8 2.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Phage_gp53 PF11246.3 gi|84489510|ref|YP_447742.1| - 0.0012 18.3 0.0 0.0016 17.9 0.0 1.2 1 0 0 1 1 1 1 Base plate wedge protein 53 F_actin_cap_B PF01115.12 gi|84489510|ref|YP_447742.1| - 0.0016 17.7 0.0 0.0016 17.7 0.0 1.1 1 0 0 1 1 1 1 F-actin capping protein, beta subunit DUF1802 PF08819.6 gi|84489511|ref|YP_447743.1| - 2.9e-45 154.0 0.1 3.3e-45 153.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1802) NIR_SIR PF01077.17 gi|84489512|ref|YP_447744.1| - 1.2e-31 109.1 3.0 2e-31 108.4 1.2 1.8 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain Fer4 PF00037.22 gi|84489512|ref|YP_447744.1| - 7.1e-12 44.4 11.5 9.1e-07 28.2 2.0 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain NIR_SIR_ferr PF03460.12 gi|84489512|ref|YP_447744.1| - 1e-11 44.2 0.0 1.7e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4_6 PF12837.2 gi|84489512|ref|YP_447744.1| - 5.8e-10 38.5 18.5 2.2e-06 27.2 1.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489512|ref|YP_447744.1| - 1.2e-08 35.2 40.5 2.2e-06 27.9 9.1 2.6 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489512|ref|YP_447744.1| - 4.1e-08 33.3 28.8 1.8e-05 24.8 9.3 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489512|ref|YP_447744.1| - 3.6e-07 29.9 16.1 9.5e-05 22.1 5.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489512|ref|YP_447744.1| - 6.7e-06 25.8 12.1 6.7e-06 25.8 8.4 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84489512|ref|YP_447744.1| - 3.2e-05 23.6 2.5 3.2e-05 23.6 1.7 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84489512|ref|YP_447744.1| - 0.00027 21.5 14.3 0.037 14.7 0.3 3.2 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|84489512|ref|YP_447744.1| - 0.00028 21.3 10.3 0.018 15.5 0.5 2.8 3 0 0 3 3 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|84489512|ref|YP_447744.1| - 0.0034 17.5 22.0 0.0074 16.5 2.8 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84489512|ref|YP_447744.1| - 0.008 16.1 12.0 0.008 16.1 8.3 2.5 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84489512|ref|YP_447744.1| - 0.11 12.8 9.5 0.29 11.5 0.9 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|84489512|ref|YP_447744.1| - 0.27 11.6 17.9 0.65 10.3 1.6 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489512|ref|YP_447744.1| - 0.37 11.4 24.8 0.25 11.9 4.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Tctex-1 PF03645.8 gi|84489513|ref|YP_447745.1| - 0.012 15.4 2.4 0.017 14.9 1.5 1.4 1 1 0 1 1 1 0 Tctex-1 family Peptidase_C65 PF10275.4 gi|84489513|ref|YP_447745.1| - 0.058 12.7 1.4 0.061 12.6 1.0 1.1 1 0 0 1 1 1 0 Peptidase C65 Otubain DASH_Dad3 PF08656.5 gi|84489513|ref|YP_447745.1| - 0.072 12.7 2.4 0.15 11.7 1.6 1.7 1 1 0 1 1 1 0 DASH complex subunit Dad3 DUF4105 PF13387.1 gi|84489513|ref|YP_447745.1| - 0.1 11.7 1.0 0.11 11.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) Fib_alpha PF08702.5 gi|84489513|ref|YP_447745.1| - 0.15 12.1 3.3 0.15 12.1 2.3 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family HATPase_c PF02518.21 gi|84489515|ref|YP_447747.1| - 2.1e-07 30.6 0.0 2.7e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|84489515|ref|YP_447747.1| - 0.069 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF4325 PF14213.1 gi|84489516|ref|YP_447748.1| - 2.3e-05 23.9 0.7 3.6e-05 23.3 0.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4325) CCDC-167 PF15188.1 gi|84489517|ref|YP_447749.1| - 0.0089 15.9 0.1 0.021 14.7 0.1 1.7 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 167 FAINT PF04385.10 gi|84489518|ref|YP_447750.1| - 0.033 14.0 0.6 0.033 14.0 0.4 2.8 3 0 0 3 3 3 0 Domain of unknown function, DUF529 HEPN PF05168.9 gi|84489520|ref|YP_447752.1| - 1.6e-05 24.7 5.9 1.8e-05 24.5 4.1 1.1 1 0 0 1 1 1 1 HEPN domain MRP-S27 PF10037.4 gi|84489520|ref|YP_447752.1| - 0.0035 16.3 1.0 0.0041 16.0 0.7 1.1 1 0 0 1 1 1 1 Mitochondrial 28S ribosomal protein S27 NADase_NGA PF07461.6 gi|84489520|ref|YP_447752.1| - 0.1 11.2 6.8 0.11 11.1 4.7 1.1 1 0 0 1 1 1 0 Nicotine adenine dinucleotide glycohydrolase (NADase) CompInhib_SCIN PF11546.3 gi|84489520|ref|YP_447752.1| - 0.18 11.6 2.8 0.41 10.4 1.9 1.8 1 1 0 1 1 1 0 Staphylococcal complement inhibitor SCIN Retrotrans_gag PF03732.12 gi|84489520|ref|YP_447752.1| - 0.29 11.2 2.1 0.52 10.4 1.5 1.7 1 1 0 1 1 1 0 Retrotransposon gag protein RPW8 PF05659.6 gi|84489520|ref|YP_447752.1| - 2.6 7.5 5.2 0.55 9.7 0.7 1.8 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MgsA_C PF12002.3 gi|84489520|ref|YP_447752.1| - 3.2 7.4 6.8 1.1 8.9 0.6 2.0 1 1 1 2 2 2 0 MgsA AAA+ ATPase C terminal DUF1510 PF07423.6 gi|84489521|ref|YP_447753.1| - 0.00016 21.0 0.2 0.00017 21.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) SoxE PF06525.6 gi|84489521|ref|YP_447753.1| - 0.00027 20.2 1.6 0.0003 20.1 1.1 1.1 1 0 0 1 1 1 1 Sulfocyanin (SoxE) SpoIIIAH PF12685.2 gi|84489521|ref|YP_447753.1| - 0.0015 18.0 0.4 0.0016 17.9 0.3 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein DUF3592 PF12158.3 gi|84489521|ref|YP_447753.1| - 0.0022 17.8 0.0 0.0028 17.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3592) DUF1980 PF09323.5 gi|84489521|ref|YP_447753.1| - 0.0042 16.8 0.5 0.0049 16.6 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1980) Tetraspannin PF00335.15 gi|84489521|ref|YP_447753.1| - 0.0063 15.8 0.3 0.0076 15.5 0.2 1.1 1 0 0 1 1 1 1 Tetraspanin family Baculo_11_kDa PF06143.6 gi|84489521|ref|YP_447753.1| - 0.0076 15.5 2.5 0.0087 15.4 1.3 1.5 1 1 0 1 1 1 1 Baculovirus 11 kDa family DUF4097 PF13349.1 gi|84489521|ref|YP_447753.1| - 0.0095 15.5 2.7 0.012 15.2 1.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4097) ABC2_membrane_3 PF12698.2 gi|84489521|ref|YP_447753.1| - 0.017 14.1 0.4 0.019 14.0 0.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Cytomega_UL20A PF05984.7 gi|84489521|ref|YP_447753.1| - 0.017 15.2 0.5 0.021 15.0 0.3 1.2 1 0 0 1 1 1 0 Cytomegalovirus UL20A protein Shisa PF13908.1 gi|84489521|ref|YP_447753.1| - 0.034 14.3 0.1 0.038 14.1 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3566 PF12089.3 gi|84489521|ref|YP_447753.1| - 0.037 14.0 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) DUF2500 PF10694.4 gi|84489521|ref|YP_447753.1| - 0.048 13.6 0.1 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) Sigma_reg_N PF13800.1 gi|84489521|ref|YP_447753.1| - 0.052 13.5 0.3 0.06 13.3 0.2 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF3609 PF12259.3 gi|84489521|ref|YP_447753.1| - 0.058 12.0 0.2 0.074 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3609) COPI_assoc PF08507.5 gi|84489521|ref|YP_447753.1| - 0.069 12.8 0.0 0.087 12.5 0.0 1.1 1 0 0 1 1 1 0 COPI associated protein DUF3139 PF11337.3 gi|84489521|ref|YP_447753.1| - 0.087 13.1 1.5 0.16 12.2 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) Ly49 PF08391.5 gi|84489521|ref|YP_447753.1| - 0.099 12.7 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1312 PF07009.6 gi|84489521|ref|YP_447753.1| - 0.1 12.4 0.2 0.14 11.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1312) DUF929 PF06053.6 gi|84489521|ref|YP_447753.1| - 0.1 11.6 3.6 0.05 12.6 1.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF929) DUF1628 PF07790.6 gi|84489521|ref|YP_447753.1| - 0.19 12.4 2.1 0.3 11.8 1.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) EphA2_TM PF14575.1 gi|84489521|ref|YP_447753.1| - 0.35 11.2 2.6 0.94 9.9 1.8 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Class_IIIsignal PF04021.7 gi|84489521|ref|YP_447753.1| - 1.6 8.5 3.9 2.6 7.9 2.7 1.2 1 0 0 1 1 1 0 Class III signal peptide Chordopox_A13L PF05961.6 gi|84489521|ref|YP_447753.1| - 1.8 8.5 10.2 94 3.0 7.1 2.2 1 1 0 1 1 1 0 Chordopoxvirus A13L protein Big_1 PF02369.11 gi|84489522|ref|YP_447754.1| - 6e-05 22.8 0.4 6e-05 22.8 0.3 6.7 5 0 0 5 5 5 3 Bacterial Ig-like domain (group 1) DUF824 PF05688.6 gi|84489522|ref|YP_447754.1| - 0.012 15.2 7.2 0.056 13.0 0.2 3.7 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) adh_short PF00106.20 gi|84489523|ref|YP_447755.1| - 3.8e-29 101.7 0.0 4.7e-29 101.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|84489523|ref|YP_447755.1| - 5.7e-29 101.5 0.0 6.8e-29 101.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|84489523|ref|YP_447755.1| - 1.6e-16 60.5 0.0 2.2e-16 60.0 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.13 gi|84489523|ref|YP_447755.1| - 0.024 14.2 0.2 0.036 13.7 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaP_Bmeg PF09602.5 gi|84489523|ref|YP_447755.1| - 0.035 13.9 0.0 2.2 8.1 0.0 2.2 2 0 0 2 2 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) MTS PF05175.9 gi|84489523|ref|YP_447755.1| - 0.079 12.3 0.1 0.93 8.8 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase small domain Adenine_deam_C PF13382.1 gi|84489523|ref|YP_447755.1| - 0.11 11.6 0.4 0.22 10.6 0.1 1.6 2 0 0 2 2 2 0 Adenine deaminase C-terminal domain T4SS-DNA_transf PF02534.9 gi|84489523|ref|YP_447755.1| - 0.13 10.8 0.3 0.2 10.2 0.2 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer Acyl_transf_3 PF01757.17 gi|84489524|ref|YP_447756.1| - 5.2e-29 101.1 41.5 6e-29 100.9 28.8 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2180 PF09947.4 gi|84489525|ref|YP_447757.1| - 9.7e-37 124.5 5.2 1.1e-36 124.4 3.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.1 gi|84489525|ref|YP_447757.1| - 0.00019 21.7 3.9 0.0013 19.1 0.4 2.1 2 0 0 2 2 2 1 DDE_Tnp_1-like zinc-ribbon FYVE PF01363.16 gi|84489525|ref|YP_447757.1| - 0.0035 17.1 0.5 0.0047 16.8 0.3 1.2 1 0 0 1 1 1 1 FYVE zinc finger zf-UBR PF02207.15 gi|84489525|ref|YP_447757.1| - 0.14 11.9 2.9 0.76 9.5 0.8 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) zf-AD PF07776.10 gi|84489525|ref|YP_447757.1| - 0.32 11.0 5.1 1.8 8.6 3.5 2.3 1 1 0 1 1 1 0 Zinc-finger associated domain (zf-AD) zf-RING_5 PF14634.1 gi|84489525|ref|YP_447757.1| - 0.73 9.6 5.2 3.3 7.5 0.7 2.3 2 0 0 2 2 2 0 zinc-RING finger domain Prok-RING_1 PF14446.1 gi|84489525|ref|YP_447757.1| - 1.1 8.9 7.4 0.44 10.3 2.2 2.1 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 Zn_ribbon_2 PF12674.2 gi|84489525|ref|YP_447757.1| - 1.7 9.0 5.7 23 5.3 1.6 2.9 1 1 1 2 2 2 0 Putative zinc ribbon domain Transp_Tc5_C PF04236.10 gi|84489525|ref|YP_447757.1| - 3.1 8.0 7.1 4.2 7.6 2.0 2.2 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain zf-C3HC4_2 PF13923.1 gi|84489525|ref|YP_447757.1| - 6 6.9 7.8 3.4 7.7 2.3 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.1 gi|84489525|ref|YP_447757.1| - 8.6 6.0 7.5 12 5.5 0.1 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_3 PF13920.1 gi|84489525|ref|YP_447757.1| - 9.5 5.9 7.3 8.6 6.1 2.0 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) TetR_N PF00440.18 gi|84489526|ref|YP_447758.1| - 1.2e-13 50.4 0.0 2.1e-13 49.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_4 PF08359.6 gi|84489526|ref|YP_447758.1| - 0.00051 19.9 0.5 0.00051 19.9 0.4 1.6 2 0 0 2 2 2 1 YsiA-like protein, C-terminal region TetR_C_5 PF08360.6 gi|84489526|ref|YP_447758.1| - 0.0012 18.8 3.8 0.0012 18.8 2.7 2.3 1 1 1 2 2 2 1 QacR-like protein, C-terminal region TetR_C_2 PF08361.6 gi|84489526|ref|YP_447758.1| - 0.0016 18.3 0.2 0.0027 17.5 0.1 1.4 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region Put_DNA-bind_N PF06971.8 gi|84489526|ref|YP_447758.1| - 0.064 13.0 0.0 0.55 10.0 0.0 2.5 3 0 0 3 3 3 0 Putative DNA-binding protein N-terminus HTH_24 PF13412.1 gi|84489526|ref|YP_447758.1| - 0.072 12.4 0.0 0.89 8.9 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding 3HCDH_N PF02737.13 gi|84489527|ref|YP_447759.1| - 1.5e-35 122.5 0.0 1.6e-34 119.1 0.0 2.3 2 1 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.17 gi|84489527|ref|YP_447759.1| - 2.5e-16 59.8 0.0 4.8e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.18 gi|84489527|ref|YP_447759.1| - 1.4e-07 31.3 0.2 7.9e-06 25.6 0.1 2.6 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|84489527|ref|YP_447759.1| - 3.2e-06 27.0 0.0 0.084 12.7 0.0 2.4 2 0 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|84489527|ref|YP_447759.1| - 0.00093 18.6 0.2 0.81 9.0 0.0 2.6 1 1 1 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IlvN PF07991.7 gi|84489527|ref|YP_447759.1| - 0.002 17.5 0.1 2.1 7.6 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 gi|84489527|ref|YP_447759.1| - 0.014 15.7 0.1 3.6 8.0 0.1 2.3 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.1 gi|84489527|ref|YP_447759.1| - 0.029 14.3 0.0 0.27 11.2 0.0 2.1 2 0 0 2 2 2 0 NADH(P)-binding DUF2164 PF09932.4 gi|84489527|ref|YP_447759.1| - 0.05 13.3 0.6 1.7 8.5 0.0 3.1 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2164) ApbA PF02558.11 gi|84489527|ref|YP_447759.1| - 0.071 12.5 0.1 0.14 11.6 0.0 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA PP_kinase_C PF13090.1 gi|84489529|ref|YP_447761.1| - 6.7e-142 472.2 8.3 9.3e-142 471.7 5.8 1.1 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain PP_kinase PF02503.12 gi|84489529|ref|YP_447761.1| - 1e-47 162.3 3.0 1.7e-47 161.5 2.1 1.4 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.1 gi|84489529|ref|YP_447761.1| - 7e-33 112.9 0.3 3.3e-32 110.8 0.2 2.2 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.1 gi|84489529|ref|YP_447761.1| - 2.8e-09 36.7 4.9 0.00025 20.7 0.7 3.1 2 1 0 2 2 2 2 PLD-like domain Ppx-GppA PF02541.11 gi|84489530|ref|YP_447762.1| - 8.5e-24 84.2 0.2 9.3e-24 84.0 0.1 1.0 1 0 0 1 1 1 1 Ppx/GppA phosphatase family Zea_mays_MuDR PF05928.6 gi|84489530|ref|YP_447762.1| - 0.014 14.8 0.1 0.02 14.3 0.1 1.3 1 0 0 1 1 1 0 Zea mays MURB-like protein (MuDR) UCH PF00443.24 gi|84489530|ref|YP_447762.1| - 0.078 12.0 0.2 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase FtsA PF14450.1 gi|84489530|ref|YP_447762.1| - 0.15 11.8 1.5 0.33 10.7 0.6 1.9 1 1 0 1 1 1 0 Cell division protein FtsA Ppx-GppA PF02541.11 gi|84489531|ref|YP_447763.1| - 0.089 11.9 0.1 0.097 11.8 0.1 1.1 1 0 0 1 1 1 0 Ppx/GppA phosphatase family Na_H_Exchanger PF00999.16 gi|84489532|ref|YP_447764.1| - 5.9e-67 225.8 57.2 7.2e-67 225.5 39.7 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|84489532|ref|YP_447764.1| - 3.6e-23 81.7 1.3 3.6e-23 81.7 0.9 1.8 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.16 gi|84489532|ref|YP_447764.1| - 4.2e-06 26.2 0.0 1.1e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 TrkA-C domain zf-ribbon_3 PF13248.1 gi|84489533|ref|YP_447765.1| - 3.6e-15 54.6 17.2 2.1e-05 23.5 2.1 3.4 3 0 0 3 3 3 3 zinc-ribbon domain DZR PF12773.2 gi|84489533|ref|YP_447765.1| - 2.4e-14 52.8 14.1 9.1e-11 41.4 4.4 2.6 2 1 0 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|84489533|ref|YP_447765.1| - 3.4e-12 45.4 25.2 6.5e-06 25.4 3.6 3.6 3 0 0 3 3 3 3 zinc-ribbon domain UPF0547 PF10571.4 gi|84489533|ref|YP_447765.1| - 1.5e-09 37.3 21.4 0.0031 17.1 0.4 3.5 3 0 0 3 3 3 3 Uncharacterised protein family UPF0547 Prok-RING_1 PF14446.1 gi|84489533|ref|YP_447765.1| - 0.00033 20.3 16.7 0.03 14.0 1.0 3.3 3 0 0 3 3 3 2 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.1 gi|84489533|ref|YP_447765.1| - 0.0031 17.1 16.4 0.12 12.0 0.6 3.3 3 0 0 3 3 3 2 Zinc finger, C3HC4 type (RING finger) FYDLN_acid PF09538.5 gi|84489533|ref|YP_447765.1| - 0.0059 17.1 15.6 1.1 9.8 3.1 3.2 1 1 1 2 2 2 1 Protein of unknown function (FYDLN_acid) DUF1207 PF06727.6 gi|84489533|ref|YP_447765.1| - 0.017 13.9 0.0 0.13 11.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1207) DUF35_N PF12172.3 gi|84489533|ref|YP_447765.1| - 0.03 14.2 10.3 1.9 8.5 0.8 3.4 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.7 gi|84489533|ref|YP_447765.1| - 0.033 13.9 4.1 0.033 13.9 2.8 3.5 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Cys_rich_KTR PF14205.1 gi|84489533|ref|YP_447765.1| - 0.037 13.4 5.7 2.1 7.8 0.1 3.5 3 0 0 3 3 3 0 Cysteine-rich KTR FYVE PF01363.16 gi|84489533|ref|YP_447765.1| - 0.047 13.5 7.7 0.31 10.9 0.6 2.6 1 1 1 2 2 2 0 FYVE zinc finger zf-DHHC PF01529.15 gi|84489533|ref|YP_447765.1| - 0.047 13.0 0.3 0.047 13.0 0.2 4.1 2 2 2 4 4 4 0 DHHC palmitoyltransferase UPF0139 PF03669.8 gi|84489533|ref|YP_447765.1| - 0.052 13.0 1.1 0.13 11.7 0.8 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) Lar_restr_allev PF14354.1 gi|84489533|ref|YP_447765.1| - 0.13 12.5 18.7 0.27 11.5 0.4 4.2 1 1 2 3 3 3 0 Restriction alleviation protein Lar NOB1_Zn_bind PF08772.6 gi|84489533|ref|YP_447765.1| - 0.14 11.9 0.4 0.14 11.9 0.2 3.6 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zf-NADH-PPase PF09297.6 gi|84489533|ref|YP_447765.1| - 0.17 11.4 0.1 0.17 11.4 0.1 5.4 5 1 0 5 5 5 0 NADH pyrophosphatase zinc ribbon domain YhfH PF14149.1 gi|84489533|ref|YP_447765.1| - 0.18 11.6 20.1 17 5.3 2.1 5.9 4 2 2 6 6 6 0 YhfH-like protein PolC_DP2 PF03833.8 gi|84489533|ref|YP_447765.1| - 0.21 9.2 14.8 0.025 12.2 4.5 2.0 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.1 gi|84489533|ref|YP_447765.1| - 0.29 10.8 18.0 1.3 8.7 0.1 5.5 5 1 1 6 6 6 0 Nudix N-terminal Prok-RING_4 PF14447.1 gi|84489533|ref|YP_447765.1| - 0.3 10.6 6.2 5.3 6.6 0.0 3.7 3 2 0 3 3 3 0 Prokaryotic RING finger family 4 OrfB_Zn_ribbon PF07282.6 gi|84489533|ref|YP_447765.1| - 0.69 9.6 22.8 0.099 12.3 1.0 5.0 1 1 4 6 6 6 0 Putative transposase DNA-binding domain GFA PF04828.9 gi|84489533|ref|YP_447765.1| - 0.81 9.6 19.5 2.2 8.2 2.3 4.8 1 1 4 5 5 5 0 Glutathione-dependent formaldehyde-activating enzyme DNA_RNApol_7kD PF03604.8 gi|84489533|ref|YP_447765.1| - 0.87 9.1 24.7 2.1 7.8 0.5 5.9 3 1 4 7 7 7 0 DNA directed RNA polymerase, 7 kDa subunit vMSA PF00695.14 gi|84489533|ref|YP_447765.1| - 0.88 8.6 3.3 0.61 9.2 0.9 1.7 1 1 1 2 2 2 0 Major surface antigen from hepadnavirus DUF4191 PF13829.1 gi|84489533|ref|YP_447765.1| - 1.1 8.3 7.5 2 7.4 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) zinc_ribbon_5 PF13719.1 gi|84489533|ref|YP_447765.1| - 1.6 8.3 18.7 27 4.4 0.0 5.7 5 1 0 5 5 5 0 zinc-ribbon domain SoxD PF04267.7 gi|84489533|ref|YP_447765.1| - 1.9 8.3 6.2 3.3 7.5 0.4 3.1 3 0 0 3 3 3 0 Sarcosine oxidase, delta subunit family zf-C4H2 PF10146.4 gi|84489533|ref|YP_447765.1| - 2.1 8.2 13.0 0.26 11.2 0.2 2.7 2 1 1 3 3 3 0 Zinc finger-containing protein zinc_ribbon_4 PF13717.1 gi|84489533|ref|YP_447765.1| - 2.5 7.8 19.5 25 4.6 0.0 5.7 5 1 0 5 5 5 0 zinc-ribbon domain DUF1673 PF07895.6 gi|84489533|ref|YP_447765.1| - 2.9 7.3 13.2 1.8 8.0 0.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1673) Zn_Tnp_IS1595 PF12760.2 gi|84489533|ref|YP_447765.1| - 4 7.3 17.6 1.4 8.8 0.2 4.6 3 2 2 5 5 5 0 Transposase zinc-ribbon domain Vma12 PF11712.3 gi|84489533|ref|YP_447765.1| - 4.7 6.9 8.7 21 4.8 6.0 2.3 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Ogr_Delta PF04606.7 gi|84489533|ref|YP_447765.1| - 4.8 6.9 19.9 4.6 6.9 0.0 5.4 6 0 0 6 6 6 0 Ogr/Delta-like zinc finger zf-ribbon_3 PF13248.1 gi|84489534|ref|YP_447766.1| - 4.2e-14 51.2 16.8 2.6e-07 29.6 3.5 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489534|ref|YP_447766.1| - 9.5e-12 44.0 19.9 1e-07 31.1 3.9 2.8 2 1 1 3 3 3 3 zinc-ribbon domain DZR PF12773.2 gi|84489534|ref|YP_447766.1| - 5e-10 39.0 13.9 8.1e-10 38.3 9.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon SHOCT PF09851.4 gi|84489534|ref|YP_447766.1| - 2.5e-07 29.9 2.9 5e-07 28.9 2.0 1.6 1 0 0 1 1 1 1 Short C-terminal domain UPF0547 PF10571.4 gi|84489534|ref|YP_447766.1| - 0.0006 19.4 13.4 0.011 15.3 1.4 2.7 1 1 1 2 2 2 1 Uncharacterised protein family UPF0547 TF_Zn_Ribbon PF08271.7 gi|84489534|ref|YP_447766.1| - 0.0034 16.6 0.5 0.0034 16.6 0.3 3.3 2 1 0 2 2 2 1 TFIIB zinc-binding GvpG PF05120.7 gi|84489534|ref|YP_447766.1| - 0.014 15.2 2.2 0.032 14.0 0.3 2.2 2 0 0 2 2 2 0 Gas vesicle protein G YihI PF04220.7 gi|84489534|ref|YP_447766.1| - 0.056 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Der GTPase activator (YihI) zf-RING_3 PF14369.1 gi|84489534|ref|YP_447766.1| - 0.082 12.9 0.7 0.082 12.9 0.5 2.7 2 1 1 3 3 3 0 zinc-finger OrfB_Zn_ribbon PF07282.6 gi|84489534|ref|YP_447766.1| - 0.2 11.3 12.4 0.081 12.5 2.0 3.1 1 1 2 3 3 3 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|84489534|ref|YP_447766.1| - 0.57 10.1 12.3 11 6.1 1.9 3.7 3 0 0 3 3 3 0 Zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|84489534|ref|YP_447766.1| - 0.65 9.8 8.7 1.6 8.5 3.3 2.3 1 1 1 2 2 2 0 zinc-ribbons zf-Di19 PF05605.7 gi|84489534|ref|YP_447766.1| - 0.72 10.0 4.3 1.3 9.1 3.0 1.4 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-B_box PF00643.19 gi|84489534|ref|YP_447766.1| - 0.96 9.3 7.5 3.8 7.4 1.0 2.3 2 0 0 2 2 2 0 B-box zinc finger zf-C4pol PF14260.1 gi|84489534|ref|YP_447766.1| - 1.1 9.3 6.4 14 5.7 3.9 2.6 1 1 1 2 2 1 0 C4-type zinc-finger of DNA polymerase delta Nudix_N_2 PF14803.1 gi|84489534|ref|YP_447766.1| - 1.4 8.6 17.0 4.1 7.1 0.2 4.1 3 1 1 4 4 4 0 Nudix N-terminal DNA_RNApol_7kD PF03604.8 gi|84489534|ref|YP_447766.1| - 1.5 8.3 12.6 21 4.6 0.1 3.4 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-NADH-PPase PF09297.6 gi|84489534|ref|YP_447766.1| - 1.6 8.3 9.2 13 5.4 0.1 3.5 3 1 1 4 4 4 0 NADH pyrophosphatase zinc ribbon domain zf-TFIIB PF13453.1 gi|84489534|ref|YP_447766.1| - 1.8 7.7 8.1 0.75 9.0 3.6 1.9 2 0 0 2 2 2 0 Transcription factor zinc-finger PhnA_Zn_Ribbon PF08274.7 gi|84489534|ref|YP_447766.1| - 1.9 8.3 6.1 4.3 7.2 0.0 2.8 2 1 0 2 2 2 0 PhnA Zinc-Ribbon zf-tcix PF14952.1 gi|84489534|ref|YP_447766.1| - 2.1 7.7 12.9 1.6 8.0 2.7 2.5 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Cript PF10235.4 gi|84489534|ref|YP_447766.1| - 2.5 8.4 9.5 0.39 11.0 1.7 2.4 1 1 1 2 2 2 0 Microtubule-associated protein CRIPT NMD3 PF04981.8 gi|84489534|ref|YP_447766.1| - 4.8 6.2 10.2 9.5 5.2 5.2 2.5 2 1 0 2 2 2 0 NMD3 family DUF1351 PF07083.6 gi|84489535|ref|YP_447767.1| - 0.013 15.1 4.8 0.033 13.8 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1351) PHTB1_C PF14728.1 gi|84489535|ref|YP_447767.1| - 0.044 12.5 1.2 0.06 12.1 0.4 1.5 1 1 1 2 2 2 0 PTHB1 C-terminus Gtr1_RagA PF04670.7 gi|84489535|ref|YP_447767.1| - 0.055 12.6 3.5 0.074 12.1 2.0 1.5 1 1 1 2 2 2 0 Gtr1/RagA G protein conserved region YlbD_coat PF14071.1 gi|84489535|ref|YP_447767.1| - 0.37 10.8 6.6 0.34 10.9 3.2 1.8 1 1 1 2 2 2 0 Putative coat protein Ssu72 PF04722.8 gi|84489535|ref|YP_447767.1| - 0.62 9.3 8.5 0.38 10.0 2.6 2.0 1 1 1 2 2 2 0 Ssu72-like protein DUF2085 PF09858.4 gi|84489536|ref|YP_447768.1| - 7.4e-33 112.4 5.5 8.6e-33 112.2 3.8 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2085) DUF4345 PF14248.1 gi|84489536|ref|YP_447768.1| - 0.021 14.2 4.9 0.052 12.9 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4345) DUF1700 PF08006.6 gi|84489536|ref|YP_447768.1| - 0.69 9.1 4.4 0.82 8.9 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) PIN PF01850.16 gi|84489538|ref|YP_447770.1| - 1.3e-13 51.3 1.0 1.6e-13 51.0 0.7 1.1 1 0 0 1 1 1 1 PIN domain Antitoxin-MazE PF04014.13 gi|84489539|ref|YP_447771.1| - 0.053 13.2 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 Antidote-toxin recognition MazE YwiC PF14256.1 gi|84489540|ref|YP_447772.1| - 0.13 12.3 5.3 0.16 12.0 3.7 1.2 1 0 0 1 1 1 0 YwiC-like protein Reticulon PF02453.12 gi|84489542|ref|YP_447774.1| - 0.17 11.4 2.5 0.31 10.6 1.7 1.4 1 0 0 1 1 1 0 Reticulon DUF4143 PF13635.1 gi|84489543|ref|YP_447775.1| - 3.5e-10 39.9 0.2 4.6e-10 39.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) Pro_3_hydrox_C PF05373.6 gi|84489543|ref|YP_447775.1| - 0.14 12.2 0.1 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal Dexa_ind PF15198.1 gi|84489544|ref|YP_447776.1| - 0.12 12.2 0.1 0.15 12.0 0.1 1.3 1 1 0 1 1 1 0 Dexamethasone-induced DUF2207 PF09972.4 gi|84489545|ref|YP_447777.1| - 6.7e-104 348.2 30.2 7.6e-104 348.1 20.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) O-antigen_lig PF13425.1 gi|84489545|ref|YP_447777.1| - 0.09 12.7 4.4 0.11 12.4 0.1 2.5 1 1 1 2 2 2 0 O-antigen ligase like membrane protein IncA PF04156.9 gi|84489545|ref|YP_447777.1| - 3.4 7.2 8.8 10 5.6 0.0 2.2 2 0 0 2 2 2 0 IncA protein DUF4064 PF13273.1 gi|84489545|ref|YP_447777.1| - 5.8 7.0 13.1 13 5.9 5.7 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) PMSR PF01625.16 gi|84489546|ref|YP_447778.1| - 8e-60 201.2 0.2 1.1e-59 200.7 0.1 1.2 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase SelR PF01641.13 gi|84489546|ref|YP_447778.1| - 2e-49 166.4 0.1 6.5e-49 164.7 0.0 1.8 2 0 0 2 2 2 1 SelR domain SNF PF00209.13 gi|84489547|ref|YP_447779.1| - 3.8e-84 283.0 53.3 5e-52 177.0 20.7 2.0 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family TMEM220 PF15071.1 gi|84489547|ref|YP_447779.1| - 0.25 11.8 0.2 0.25 11.8 0.1 3.7 4 1 0 4 4 4 0 Transmembrane family 220, helix Aldo_ket_red PF00248.16 gi|84489548|ref|YP_447780.1| - 7.6e-49 166.0 0.1 9.5e-49 165.7 0.1 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_18 PF13746.1 gi|84489548|ref|YP_447780.1| - 1.1e-11 45.0 4.6 4.5e-06 27.0 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489548|ref|YP_447780.1| - 7.6e-10 38.9 7.6 1.8e-09 37.7 5.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489548|ref|YP_447780.1| - 2.9e-09 37.0 8.9 1e-08 35.2 6.2 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489548|ref|YP_447780.1| - 3e-09 36.7 5.7 6.9e-09 35.6 4.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489548|ref|YP_447780.1| - 7.8e-09 35.2 6.7 2.1e-08 33.8 4.6 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|84489548|ref|YP_447780.1| - 5e-08 32.5 5.6 0.00026 20.5 0.5 2.6 2 0 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_7 PF12838.2 gi|84489548|ref|YP_447780.1| - 5.6e-06 26.6 9.1 2.4e-05 24.6 6.3 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84489548|ref|YP_447780.1| - 6.4e-06 25.5 17.7 0.0011 18.4 2.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84489548|ref|YP_447780.1| - 3.1e-05 24.6 9.2 0.016 15.9 1.1 2.9 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|84489548|ref|YP_447780.1| - 0.0001 22.3 13.4 0.034 14.4 3.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489548|ref|YP_447780.1| - 0.00011 22.0 9.3 0.068 13.0 0.7 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489548|ref|YP_447780.1| - 0.0007 19.3 15.9 0.0085 15.9 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489548|ref|YP_447780.1| - 0.00096 18.9 14.8 0.037 13.9 3.0 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|84489548|ref|YP_447780.1| - 0.0039 17.6 15.2 0.13 12.9 2.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain FpoO PF10621.4 gi|84489548|ref|YP_447780.1| - 0.051 13.6 3.9 0.5 10.4 2.4 2.4 1 1 2 3 3 3 0 F420H2 dehydrogenase subunit FpoO Fer4_15 PF13459.1 gi|84489548|ref|YP_447780.1| - 0.32 11.6 5.0 0.76 10.3 0.4 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84489548|ref|YP_447780.1| - 8.2 6.8 13.9 1.6 9.2 2.2 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain DUF1863 PF08937.6 gi|84489549|ref|YP_447781.1| - 1.7e-24 86.3 1.3 1.7e-24 86.3 0.9 1.9 1 1 0 2 2 2 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.1 gi|84489549|ref|YP_447781.1| - 1.5e-05 25.0 0.0 2.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 TIR domain TraG-D_C PF12696.2 gi|84489549|ref|YP_447781.1| - 0.044 13.6 0.4 0.076 12.8 0.3 1.4 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG DUF262 PF03235.9 gi|84489549|ref|YP_447781.1| - 0.049 13.5 4.6 0.26 11.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF262 DUF204 PF02659.10 gi|84489550|ref|YP_447782.1| - 2e-39 133.5 20.4 6.7e-22 77.3 1.5 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF TauE PF01925.14 gi|84489550|ref|YP_447782.1| - 0.0016 17.9 17.6 0.014 14.8 12.2 2.3 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE DAGK_prokar PF01219.14 gi|84489550|ref|YP_447782.1| - 1.3 8.6 8.8 0.095 12.2 2.7 1.8 2 1 0 2 2 2 0 Prokaryotic diacylglycerol kinase TctB PF07331.6 gi|84489550|ref|YP_447782.1| - 5.4 6.6 17.6 1.7 8.2 0.6 2.7 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family NosD PF05048.8 gi|84489552|ref|YP_447784.1| - 8.3e-05 21.8 41.6 8.3e-05 21.8 28.8 4.5 2 1 2 4 4 4 1 Periplasmic copper-binding protein (NosD) DUF771 PF05595.6 gi|84489552|ref|YP_447784.1| - 0.019 14.8 1.6 0.12 12.3 1.1 2.4 1 0 0 1 1 1 0 Domain of unknown function (DUF771) TIR-like PF10137.4 gi|84489553|ref|YP_447785.1| - 0.0088 15.6 0.7 0.11 12.1 0.1 2.1 2 0 0 2 2 2 1 Predicted nucleotide-binding protein containing TIR-like domain LAGLIDADG_1 PF00961.14 gi|84489554|ref|YP_447786.1| - 0.99 9.9 6.9 1.1 9.8 3.5 2.1 1 1 1 2 2 2 0 LAGLIDADG endonuclease EF-hand_1 PF00036.27 gi|84489555|ref|YP_447787.1| - 0.021 14.1 0.5 0.053 12.8 0.4 1.6 1 0 0 1 1 1 0 EF hand EF-hand_8 PF13833.1 gi|84489555|ref|YP_447787.1| - 0.04 13.5 0.1 0.095 12.3 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Ashwin PF15323.1 gi|84489555|ref|YP_447787.1| - 0.2 11.6 5.4 0.32 10.9 3.7 1.3 1 0 0 1 1 1 0 Developmental protein DUF161 PF02588.10 gi|84489556|ref|YP_447788.1| - 0.0078 16.4 14.6 0.011 16.0 10.1 1.2 1 0 0 1 1 1 1 Uncharacterized BCR, YitT family COG1284 Clostridium_P47 PF06597.6 gi|84489556|ref|YP_447788.1| - 0.095 11.1 2.1 0.13 10.7 1.5 1.2 1 0 0 1 1 1 0 Clostridium P-47 protein Ion_trans_N PF08412.5 gi|84489556|ref|YP_447788.1| - 0.18 11.1 0.1 0.18 11.1 0.1 2.0 2 0 0 2 2 2 0 Ion transport protein N-terminal Tetraspannin PF00335.15 gi|84489556|ref|YP_447788.1| - 0.35 10.0 5.6 0.59 9.3 3.8 1.4 1 1 0 1 1 1 0 Tetraspanin family DUF4181 PF13789.1 gi|84489556|ref|YP_447788.1| - 4.2 7.3 9.5 1.2 9.1 4.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) MethyltransfD12 PF02086.10 gi|84489557|ref|YP_447789.1| - 1.6e-15 57.2 2.4 2.1e-15 56.8 1.6 1.2 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase MethyltransfD12 PF02086.10 gi|84489558|ref|YP_447790.1| - 0.0003 20.3 3.4 0.00033 20.1 2.4 1.1 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase B5 PF03484.10 gi|84489560|ref|YP_447792.1| - 0.0028 17.4 0.3 0.0046 16.7 0.2 1.4 1 0 0 1 1 1 1 tRNA synthetase B5 domain DUF1507 PF07408.6 gi|84489560|ref|YP_447792.1| - 0.029 14.0 0.1 0.037 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1507) DUF1548 PF07579.6 gi|84489560|ref|YP_447792.1| - 0.12 12.4 0.6 0.16 12.0 0.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) AAA_14 PF13173.1 gi|84489561|ref|YP_447793.1| - 6.2e-35 119.8 0.3 6.2e-35 119.8 0.2 2.2 3 1 1 4 4 4 1 AAA domain Arch_ATPase PF01637.13 gi|84489561|ref|YP_447793.1| - 7.6e-08 32.3 9.1 4.5e-05 23.2 0.4 3.5 2 1 1 3 3 3 2 Archaeal ATPase DUF4143 PF13635.1 gi|84489561|ref|YP_447793.1| - 5.4e-07 29.7 0.3 1.4e-06 28.3 0.2 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) NACHT PF05729.7 gi|84489561|ref|YP_447793.1| - 0.0027 17.3 0.0 0.0054 16.4 0.0 1.4 1 0 0 1 1 1 1 NACHT domain MobB PF03205.9 gi|84489561|ref|YP_447793.1| - 0.019 14.6 0.0 0.043 13.5 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.10 gi|84489561|ref|YP_447793.1| - 0.026 14.2 0.2 0.35 10.5 0.0 2.6 2 1 1 3 3 3 0 NTPase YflT PF11181.3 gi|84489561|ref|YP_447793.1| - 0.049 13.7 0.3 0.2 11.8 0.0 2.1 2 0 0 2 2 2 0 Heat induced stress protein YflT AAA_17 PF13207.1 gi|84489561|ref|YP_447793.1| - 0.9 10.3 3.9 37 5.1 2.7 3.2 1 1 0 1 1 1 0 AAA domain RPEL PF02755.10 gi|84489561|ref|YP_447793.1| - 4.1 6.8 5.1 23 4.4 0.1 3.2 3 0 0 3 3 3 0 RPEL repeat GIDA PF01134.17 gi|84489562|ref|YP_447794.1| - 2.3e-09 36.6 0.2 4e-09 35.8 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|84489562|ref|YP_447794.1| - 4.2e-07 29.3 0.0 1e-06 28.0 0.0 1.6 1 1 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.7 gi|84489562|ref|YP_447794.1| - 2e-06 26.9 0.0 5.3e-05 22.3 0.0 2.5 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.9 gi|84489562|ref|YP_447794.1| - 2.8e-06 27.3 1.6 7.3e-06 25.9 1.1 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|84489562|ref|YP_447794.1| - 5.2e-06 25.3 0.8 0.12 10.9 0.1 3.1 2 1 0 3 3 3 3 Tryptophan halogenase DAO PF01266.19 gi|84489562|ref|YP_447794.1| - 2.3e-05 23.5 0.0 0.018 13.9 0.0 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|84489562|ref|YP_447794.1| - 2.8e-05 22.8 0.1 8.9e-05 21.1 0.0 1.8 2 0 0 2 2 2 1 HI0933-like protein FAD_oxidored PF12831.2 gi|84489562|ref|YP_447794.1| - 0.00088 18.4 0.0 0.0029 16.7 0.0 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.12 gi|84489562|ref|YP_447794.1| - 0.0028 16.7 0.4 0.0093 15.0 0.2 2.0 1 1 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.1 gi|84489562|ref|YP_447794.1| - 0.015 15.3 0.0 0.041 13.9 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|84489562|ref|YP_447794.1| - 0.029 13.2 0.0 0.06 12.1 0.0 1.5 2 0 0 2 2 2 0 FAD binding domain Curlin_rpt PF07012.7 gi|84489562|ref|YP_447794.1| - 0.075 12.7 0.2 0.31 10.8 0.2 2.1 1 0 0 1 1 1 0 Curlin associated repeat zinc_ribbon_4 PF13717.1 gi|84489563|ref|YP_447795.1| - 0.00028 20.5 0.4 0.33 10.6 0.0 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|84489563|ref|YP_447795.1| - 0.0005 19.5 0.6 0.32 10.6 0.0 2.4 2 0 0 2 2 2 2 zinc-ribbon domain HHH_3 PF12836.2 gi|84489563|ref|YP_447795.1| - 0.00071 19.4 0.1 0.00087 19.1 0.0 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif UPF0547 PF10571.4 gi|84489563|ref|YP_447795.1| - 0.018 14.7 7.1 0.3 10.8 0.1 2.5 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.1 gi|84489563|ref|YP_447795.1| - 0.021 13.9 2.8 0.042 13.0 0.1 2.5 3 0 0 3 3 3 0 zinc-ribbon domain zf-C2H2_6 PF13912.1 gi|84489563|ref|YP_447795.1| - 0.078 12.9 0.1 0.078 12.9 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-Mss51 PF13824.1 gi|84489563|ref|YP_447795.1| - 0.34 10.8 3.0 0.46 10.3 2.1 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2H2_4 PF13894.1 gi|84489563|ref|YP_447795.1| - 0.66 10.4 5.0 6.5 7.3 0.2 2.8 2 2 1 3 3 3 0 C2H2-type zinc finger NinG PF05766.7 gi|84489563|ref|YP_447795.1| - 0.92 9.2 3.4 1.2 8.8 2.3 1.3 1 1 0 1 1 1 0 Bacteriophage Lambda NinG protein C1_3 PF07649.7 gi|84489563|ref|YP_447795.1| - 1.9 8.5 9.0 8.3 6.5 0.1 2.5 2 1 0 2 2 2 0 C1-like domain zf-DNL PF05180.7 gi|84489563|ref|YP_447795.1| - 3.8 7.2 7.2 5 6.9 5.0 1.4 1 1 0 1 1 1 0 DNL zinc finger CBAH PF02275.13 gi|84489564|ref|YP_447796.1| - 6.4e-103 344.4 5.3 7.2e-103 344.3 3.7 1.0 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family URO-D PF01208.12 gi|84489565|ref|YP_447797.1| - 2.5e-74 250.2 0.0 3.1e-74 249.9 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Meth_synt_2 PF01717.13 gi|84489565|ref|YP_447797.1| - 3.8e-06 26.1 0.1 5.5e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain PEP_mutase PF13714.1 gi|84489565|ref|YP_447797.1| - 0.018 14.2 0.0 0.033 13.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase ALAD PF00490.16 gi|84489565|ref|YP_447797.1| - 0.02 13.8 0.0 0.12 11.1 0.0 2.0 2 0 0 2 2 2 0 Delta-aminolevulinic acid dehydratase Phi-29_GP16_7 PF06720.6 gi|84489565|ref|YP_447797.1| - 0.14 11.8 0.8 0.53 9.9 0.0 2.4 2 1 0 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 CarboxypepD_reg PF13620.1 gi|84489566|ref|YP_447798.1| - 3.2e-77 254.6 150.3 4.4e-09 36.2 1.4 18.5 18 0 0 18 18 18 13 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|84489566|ref|YP_447798.1| - 9.1e-35 118.5 149.9 5.2e-05 23.2 0.8 18.3 18 1 1 19 19 19 13 Domain of unknown function (DUF4480) Big_1 PF02369.11 gi|84489566|ref|YP_447798.1| - 2e-27 95.0 265.0 2.1e-07 30.7 1.9 24.8 21 5 4 25 25 25 16 Bacterial Ig-like domain (group 1) Filamin PF00630.14 gi|84489566|ref|YP_447798.1| - 3.6e-06 27.4 71.8 0.0013 19.2 0.1 14.0 9 2 1 10 10 10 4 Filamin/ABP280 repeat DUF4178 PF13785.1 gi|84489566|ref|YP_447798.1| - 0.0062 16.5 0.4 13 5.7 0.0 4.4 2 2 2 4 4 4 1 Domain of unknown function (DUF4178) CCG PF02754.11 gi|84489567|ref|YP_447799.1| - 8.2e-20 70.6 6.6 1.3e-13 50.7 0.2 2.8 2 1 0 2 2 2 2 Cysteine-rich domain DUF2757 PF10955.3 gi|84489567|ref|YP_447799.1| - 0.0041 17.2 0.3 0.37 11.0 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2757) FpoO PF10621.4 gi|84489567|ref|YP_447799.1| - 0.12 12.4 3.5 0.096 12.7 0.3 2.0 2 0 0 2 2 2 0 F420H2 dehydrogenase subunit FpoO NAPRTase PF04095.11 gi|84489568|ref|YP_447800.1| - 2e-50 171.3 0.1 2.6e-50 171.0 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF4458 PF14660.1 gi|84489568|ref|YP_447800.1| - 0.14 12.1 1.3 7.6 6.5 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4458) MG1 PF11974.3 gi|84489569|ref|YP_447801.1| - 0.32 11.5 34.9 0.44 11.1 0.1 8.7 4 2 5 10 10 10 0 Alpha-2-macroglobulin MG1 domain Baculo_p24 PF05073.7 gi|84489570|ref|YP_447802.1| - 0.0011 18.5 3.9 0.0016 18.0 2.7 1.3 1 1 0 1 1 1 1 Baculovirus P24 capsid protein Endonuc-BglII PF09195.6 gi|84489570|ref|YP_447802.1| - 0.02 14.3 1.3 0.028 13.9 0.9 1.3 1 0 0 1 1 1 0 Restriction endonuclease BglII Ribosomal_S13 PF00416.17 gi|84489570|ref|YP_447802.1| - 0.098 13.1 2.3 0.15 12.5 0.7 1.9 1 1 1 2 2 2 0 Ribosomal protein S13/S18 RAG2_PHD PF13341.1 gi|84489570|ref|YP_447802.1| - 0.18 11.8 1.4 0.44 10.5 1.0 1.6 1 1 0 1 1 1 0 RAG2 PHD domain DUF3427 PF11907.3 gi|84489571|ref|YP_447803.1| - 4.8e-78 261.8 12.5 4.8e-78 261.8 8.7 2.4 2 1 1 3 3 3 1 Domain of unknown function (DUF3427) ResIII PF04851.10 gi|84489571|ref|YP_447803.1| - 1e-31 110.2 0.2 2.8e-31 108.7 0.1 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PLDc_2 PF13091.1 gi|84489571|ref|YP_447803.1| - 3.7e-21 75.1 0.6 1.1e-20 73.6 0.4 1.8 1 0 0 1 1 1 1 PLD-like domain Helicase_C PF00271.26 gi|84489571|ref|YP_447803.1| - 2.6e-09 36.8 0.7 2.2e-08 33.8 0.2 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|84489571|ref|YP_447803.1| - 9.6e-08 31.6 0.0 2.5e-07 30.3 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|84489571|ref|YP_447803.1| - 0.059 13.5 0.0 0.21 11.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain NAD_binding_1 PF00175.16 gi|84489571|ref|YP_447803.1| - 0.22 12.0 0.7 1.3e+02 3.1 0.0 4.1 4 0 0 4 4 4 0 Oxidoreductase NAD-binding domain Fer4_15 PF13459.1 gi|84489572|ref|YP_447804.1| - 4.9e-16 59.0 6.2 5.4e-16 58.9 4.3 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84489572|ref|YP_447804.1| - 1.3e-07 31.8 4.3 1.7e-07 31.5 3.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4 PF00037.22 gi|84489572|ref|YP_447804.1| - 0.00043 19.7 2.1 0.00043 19.7 1.5 2.3 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_19 PF06902.6 gi|84489572|ref|YP_447804.1| - 0.0055 16.5 0.6 0.0086 15.8 0.3 1.5 1 1 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_2 PF12797.2 gi|84489572|ref|YP_447804.1| - 0.01 15.7 1.5 0.01 15.7 1.0 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84489572|ref|YP_447804.1| - 0.01 15.6 4.5 0.022 14.6 1.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489572|ref|YP_447804.1| - 0.018 14.8 4.4 0.04 13.7 3.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489572|ref|YP_447804.1| - 0.045 14.1 1.1 0.045 14.1 0.8 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489572|ref|YP_447804.1| - 0.069 13.0 6.3 2.1 8.2 1.2 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489572|ref|YP_447804.1| - 0.12 12.3 0.5 0.12 12.3 0.3 2.0 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489572|ref|YP_447804.1| - 0.25 11.6 6.0 0.71 10.1 1.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF406 PF04175.7 gi|84489572|ref|YP_447804.1| - 0.87 10.1 3.3 1.2 9.6 2.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF406) Fer4_3 PF12798.2 gi|84489572|ref|YP_447804.1| - 9.1 7.1 7.5 7.1 7.4 2.0 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain CBFD_NFYB_HMF PF00808.18 gi|84489573|ref|YP_447805.1| - 1.7e-17 63.2 0.1 1.9e-17 63.0 0.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|84489573|ref|YP_447805.1| - 1.7e-09 37.6 0.0 2.1e-09 37.3 0.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.1 gi|84489573|ref|YP_447805.1| - 2.4e-07 30.8 0.0 2.7e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S CENP-T PF15511.1 gi|84489573|ref|YP_447805.1| - 1.6e-06 27.6 0.0 1.7e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T TAF PF02969.12 gi|84489573|ref|YP_447805.1| - 0.00019 21.3 0.1 0.0002 21.2 0.1 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-31kDa PF02291.10 gi|84489573|ref|YP_447805.1| - 0.00028 20.6 0.0 0.00029 20.6 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.8 gi|84489573|ref|YP_447805.1| - 0.0042 16.7 0.0 0.0047 16.6 0.0 1.2 1 0 0 1 1 1 1 Bromodomain associated TFIID_20kDa PF03847.8 gi|84489573|ref|YP_447805.1| - 0.028 14.6 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Pyridox_oxidase PF01243.15 gi|84489574|ref|YP_447806.1| - 1e-05 25.4 0.0 1.6e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|84489574|ref|YP_447806.1| - 0.004 17.0 0.0 0.0075 16.1 0.0 1.7 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase RabGAP-TBC PF00566.13 gi|84489575|ref|YP_447807.1| - 0.74 9.2 4.5 0.73 9.2 3.1 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF95 PF01944.12 gi|84489576|ref|YP_447808.1| - 7e-28 97.4 16.1 8.8e-28 97.0 11.1 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 FtsX PF02687.16 gi|84489576|ref|YP_447808.1| - 0.0014 18.3 12.4 0.012 15.3 3.2 2.6 1 1 1 2 2 2 2 FtsX-like permease family zinc_ribbon_2 PF13240.1 gi|84489577|ref|YP_447809.1| - 0.0012 18.2 1.9 0.0026 17.1 1.3 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489577|ref|YP_447809.1| - 0.061 13.1 0.5 0.12 12.2 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489577|ref|YP_447809.1| - 0.57 9.4 3.1 1.3 8.3 2.2 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Cys_rich_CPXG PF14255.1 gi|84489577|ref|YP_447809.1| - 1.7 8.4 5.8 2.7e+02 1.4 4.0 2.8 1 1 0 1 1 1 0 Cysteine-rich CPXCG URO-D PF01208.12 gi|84489578|ref|YP_447810.1| - 1.1e-66 225.1 0.0 1.3e-66 224.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) PMBR PF09373.5 gi|84489579|ref|YP_447811.1| - 9.7e-27 91.6 6.2 1.1e-08 34.5 0.0 4.4 3 0 0 3 3 3 3 Pseudomurein-binding repeat Transglut_core PF01841.14 gi|84489579|ref|YP_447811.1| - 3.3e-19 69.1 0.1 9e-19 67.7 0.1 1.8 1 0 0 1 1 1 1 Transglutaminase-like superfamily PepSY PF03413.14 gi|84489580|ref|YP_447812.1| - 2.4e-15 56.8 8.9 0.00024 21.6 0.2 3.3 3 0 0 3 3 3 3 Peptidase propeptide and YPEB domain 4_1_CTD PF05902.8 gi|84489580|ref|YP_447812.1| - 2e-08 34.2 0.0 0.94 9.5 0.0 4.9 4 2 2 6 6 6 3 4.1 protein C-terminal domain (CTD) DUF2874 PF11396.3 gi|84489580|ref|YP_447812.1| - 5.9e-06 26.1 17.8 0.13 12.2 0.2 4.6 5 0 0 5 5 5 3 Protein of unknown function (DUF2874) DUF1811 PF08838.5 gi|84489580|ref|YP_447812.1| - 7.5e-05 22.6 0.2 5.2 7.0 0.0 3.5 3 0 0 3 3 3 3 Protein of unknown function (DUF1811) DUF2491 PF10679.4 gi|84489580|ref|YP_447812.1| - 0.0027 16.7 0.4 11 4.8 0.0 3.2 3 0 0 3 3 3 2 Protein of unknown function (DUF2491) DUF3085 PF11284.3 gi|84489580|ref|YP_447812.1| - 0.059 13.5 0.0 56 4.0 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3085) DUF35 PF01796.12 gi|84489580|ref|YP_447812.1| - 0.3 11.3 2.1 1.2e+02 3.0 0.0 3.3 3 0 0 3 3 3 0 DUF35 OB-fold domain CW_binding_2 PF04122.7 gi|84489580|ref|YP_447812.1| - 7.3 6.8 11.0 84 3.4 0.0 4.9 4 1 1 5 5 5 0 Putative cell wall binding repeat 2 Peptidase_C1 PF00112.18 gi|84489581|ref|YP_447813.1| - 1.8e-22 80.3 4.3 1.8e-22 80.3 3.0 3.6 3 0 0 3 3 3 1 Papain family cysteine protease Inhibitor_G39P PF11417.3 gi|84489581|ref|YP_447813.1| - 0.017 15.0 0.9 13 5.8 0.1 3.4 2 0 0 2 2 2 0 Loader and inhibitor of phage G40P FMN_red PF03358.10 gi|84489583|ref|YP_447815.1| - 1.4e-14 53.8 0.0 1.7e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489583|ref|YP_447815.1| - 0.00039 19.9 0.0 0.0005 19.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Tyr_Deacylase PF02580.11 gi|84489585|ref|YP_447817.1| - 9.1e-53 178.1 0.1 1e-52 177.9 0.1 1.0 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase KdpD PF02702.12 gi|84489585|ref|YP_447817.1| - 0.0097 15.0 0.0 0.013 14.6 0.0 1.1 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain DUF998 PF06197.8 gi|84489587|ref|YP_447819.1| - 1.4e-12 47.2 0.6 2.4e-12 46.5 0.2 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF998) DUF308 PF03729.8 gi|84489587|ref|YP_447819.1| - 0.013 15.5 5.0 0.013 15.5 3.5 3.5 2 1 0 3 3 3 0 Short repeat of unknown function (DUF308) DUF4131 PF13567.1 gi|84489587|ref|YP_447819.1| - 0.73 9.2 3.7 2.5 7.4 1.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF1453 PF07301.6 gi|84489587|ref|YP_447819.1| - 1.2 8.9 17.6 0.26 11.1 9.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1453) DUF872 PF05915.7 gi|84489587|ref|YP_447819.1| - 5.7 6.8 13.4 2.2 8.1 1.2 3.2 1 1 2 3 3 3 0 Eukaryotic protein of unknown function (DUF872) RICH PF05062.7 gi|84489588|ref|YP_447820.1| - 0.00022 21.2 0.5 0.00036 20.6 0.3 1.3 1 0 0 1 1 1 1 RICH domain Herpes_TK PF00693.13 gi|84489588|ref|YP_447820.1| - 0.006 15.7 0.0 0.0067 15.6 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase from herpesvirus DUF1450 PF07293.6 gi|84489588|ref|YP_447820.1| - 0.1 12.5 0.4 0.15 12.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) zf-ribbon_3 PF13248.1 gi|84489589|ref|YP_447821.1| - 2.8e-06 26.3 0.6 5.4e-06 25.4 0.5 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489589|ref|YP_447821.1| - 0.0021 17.4 3.0 0.0048 16.3 2.1 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489589|ref|YP_447821.1| - 0.0038 17.0 0.3 0.0082 15.9 0.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon DUF2248 PF10005.4 gi|84489589|ref|YP_447821.1| - 0.0076 15.2 0.3 0.012 14.5 0.2 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2248) BUD22 PF09073.5 gi|84489589|ref|YP_447821.1| - 0.11 11.5 0.2 0.2 10.7 0.2 1.4 1 0 0 1 1 1 0 BUD22 zinc_ribbon_4 PF13717.1 gi|84489589|ref|YP_447821.1| - 0.6 9.8 3.0 1.5 8.5 0.1 2.6 1 1 1 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|84489590|ref|YP_447822.1| - 0.0074 16.0 0.3 0.016 15.0 0.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489590|ref|YP_447822.1| - 0.024 13.8 0.6 0.042 13.0 0.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DUF955 PF06114.8 gi|84489590|ref|YP_447822.1| - 0.025 14.3 0.1 0.063 13.0 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF955) TF_Zn_Ribbon PF08271.7 gi|84489590|ref|YP_447822.1| - 0.025 13.8 0.7 5.3 6.4 0.0 2.9 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RanBP PF00641.13 gi|84489590|ref|YP_447822.1| - 0.091 11.8 0.4 0.19 10.8 0.3 1.5 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others FliG_N PF14842.1 gi|84489590|ref|YP_447822.1| - 0.14 12.2 1.9 5.6 7.1 0.2 3.4 3 2 1 4 4 4 0 FliG N-terminal domain Med27 PF11571.3 gi|84489590|ref|YP_447822.1| - 1.2 9.3 4.9 3.6 7.7 0.1 3.1 2 1 1 3 3 3 0 Mediator complex subunit 27 Lactamase_B PF00753.22 gi|84489591|ref|YP_447823.1| - 8.3e-21 74.5 0.0 1.2e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|84489591|ref|YP_447823.1| - 2e-11 44.0 0.0 3.6e-11 43.2 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin Desulfoferrodox PF01880.13 gi|84489592|ref|YP_447824.1| - 8.6e-23 80.4 0.1 1.2e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 Desulfoferrodoxin Rubrerythrin PF02915.12 gi|84489593|ref|YP_447825.1| - 4e-29 101.6 4.8 4.9e-29 101.3 3.3 1.1 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|84489593|ref|YP_447825.1| - 7.6e-06 25.7 1.8 9.4e-06 25.4 1.2 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF3279 PF11682.3 gi|84489593|ref|YP_447825.1| - 0.00092 18.7 0.4 0.0016 17.9 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3279) TF_Zn_Ribbon PF08271.7 gi|84489593|ref|YP_447825.1| - 0.052 12.8 2.1 6.2 6.2 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding HypA PF01155.14 gi|84489593|ref|YP_447825.1| - 0.058 13.0 0.1 0.11 12.2 0.0 1.6 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF1828 PF08861.5 gi|84489593|ref|YP_447825.1| - 0.087 12.4 0.3 0.19 11.3 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function DUF1828 zf-C3HC4_3 PF13920.1 gi|84489593|ref|YP_447825.1| - 0.12 12.0 0.5 0.21 11.2 0.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF4379 PF14311.1 gi|84489593|ref|YP_447825.1| - 0.2 11.4 3.7 1.2 8.9 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4379) zf-C2H2_4 PF13894.1 gi|84489593|ref|YP_447825.1| - 0.47 10.8 2.2 19 5.8 0.1 2.7 2 0 0 2 2 2 0 C2H2-type zinc finger Rubredoxin PF00301.15 gi|84489593|ref|YP_447825.1| - 0.81 9.6 7.1 4.4 7.2 3.4 2.6 2 1 0 2 2 2 0 Rubredoxin ADK_lid PF05191.9 gi|84489593|ref|YP_447825.1| - 1.9 8.2 4.4 5.6 6.7 3.1 1.8 1 1 0 1 1 1 0 Adenylate kinase, active site lid DUF2070 PF09843.4 gi|84489594|ref|YP_447826.1| - 3.2e-47 160.3 0.2 4.7e-47 159.7 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Fumerase_C PF05683.7 gi|84489595|ref|YP_447827.1| - 9.1e-54 181.7 0.0 9.9e-54 181.5 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus PsbP PF01789.11 gi|84489596|ref|YP_447828.1| - 0.019 14.4 1.1 0.026 13.9 0.3 1.7 2 0 0 2 2 2 0 PsbP FliD_C PF07195.7 gi|84489597|ref|YP_447829.1| - 6.6e-05 22.3 3.7 7.3e-05 22.1 2.6 1.0 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus Tektin PF03148.9 gi|84489597|ref|YP_447829.1| - 0.0035 15.9 5.6 0.0043 15.6 3.8 1.1 1 0 0 1 1 1 1 Tektin family DUF812 PF05667.6 gi|84489597|ref|YP_447829.1| - 0.069 11.6 5.0 0.068 11.6 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Ribosomal_S15 PF00312.17 gi|84489597|ref|YP_447829.1| - 0.13 11.9 0.8 0.3 10.8 0.2 1.9 1 1 1 2 2 2 0 Ribosomal protein S15 DUF1870 PF08965.5 gi|84489597|ref|YP_447829.1| - 0.15 11.7 1.7 0.21 11.2 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1870) YflT PF11181.3 gi|84489597|ref|YP_447829.1| - 0.18 11.9 2.8 0.16 12.1 0.5 1.8 1 1 1 2 2 2 0 Heat induced stress protein YflT AAA_13 PF13166.1 gi|84489597|ref|YP_447829.1| - 0.22 9.9 9.0 0.26 9.7 6.2 1.1 1 0 0 1 1 1 0 AAA domain Prefoldin PF02996.12 gi|84489597|ref|YP_447829.1| - 0.33 10.6 7.6 0.045 13.3 2.3 1.7 2 0 0 2 2 2 0 Prefoldin subunit TMF_DNA_bd PF12329.3 gi|84489597|ref|YP_447829.1| - 0.4 10.5 9.7 0.29 10.9 5.8 1.5 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF2680 PF10925.3 gi|84489597|ref|YP_447829.1| - 0.71 9.7 4.2 0.31 10.9 1.1 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2680) DivIC PF04977.10 gi|84489597|ref|YP_447829.1| - 1.4 8.4 6.5 0.28 10.7 2.0 1.7 2 1 0 2 2 2 0 Septum formation initiator XhlA PF10779.4 gi|84489597|ref|YP_447829.1| - 1.6 8.7 10.3 0.78 9.6 4.8 2.3 1 1 1 2 2 2 0 Haemolysin XhlA Tho2 PF11262.3 gi|84489597|ref|YP_447829.1| - 2.8 6.9 9.4 0.74 8.8 1.0 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 DUF4430 PF14478.1 gi|84489598|ref|YP_447830.1| - 0.0075 16.3 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4430) AAA_11 PF13086.1 gi|84489599|ref|YP_447831.1| - 1.1e-43 149.5 5.7 6.7e-43 146.9 2.9 2.5 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.1 gi|84489599|ref|YP_447831.1| - 4.9e-42 143.5 6.6 4.9e-42 143.5 4.6 2.8 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.1 gi|84489599|ref|YP_447831.1| - 2.4e-12 46.4 0.0 4.2e-11 42.4 0.0 2.2 2 0 0 2 2 2 1 Part of AAA domain AAA_30 PF13604.1 gi|84489599|ref|YP_447831.1| - 2e-11 43.8 0.0 3.4e-08 33.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.13 gi|84489599|ref|YP_447831.1| - 9.5e-10 38.3 0.4 0.0066 15.9 0.0 3.4 2 1 0 3 3 3 3 Viral (Superfamily 1) RNA helicase Helicase_RecD PF05127.9 gi|84489599|ref|YP_447831.1| - 2.5e-05 23.9 0.3 0.0033 17.0 0.0 2.5 1 1 1 2 2 2 1 Helicase Flavi_DEAD PF07652.9 gi|84489599|ref|YP_447831.1| - 0.00032 20.4 0.2 0.0026 17.5 0.0 2.5 3 0 0 3 3 3 1 Flavivirus DEAD domain MobB PF03205.9 gi|84489599|ref|YP_447831.1| - 0.0028 17.3 0.0 0.0028 17.3 0.0 2.3 2 1 1 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B PhoH PF02562.11 gi|84489599|ref|YP_447831.1| - 0.0029 16.8 1.4 0.047 12.9 0.0 2.8 3 0 0 3 3 3 1 PhoH-like protein Zot PF05707.7 gi|84489599|ref|YP_447831.1| - 0.0035 16.8 0.1 0.0097 15.3 0.1 1.9 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) T2SE PF00437.15 gi|84489599|ref|YP_447831.1| - 0.0042 16.0 0.3 0.011 14.6 0.2 1.8 1 1 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.1 gi|84489599|ref|YP_447831.1| - 0.0047 17.0 0.2 0.056 13.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|84489599|ref|YP_447831.1| - 0.0059 16.0 0.2 0.089 12.1 0.0 2.8 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA PF00004.24 gi|84489599|ref|YP_447831.1| - 0.01 16.0 0.0 0.045 13.9 0.0 2.2 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) UvrD_C_2 PF13538.1 gi|84489599|ref|YP_447831.1| - 0.026 14.6 0.2 0.23 11.6 0.0 2.9 2 1 0 2 2 2 0 UvrD-like helicase C-terminal domain ParA PF10609.4 gi|84489599|ref|YP_447831.1| - 0.035 13.9 0.6 0.12 12.2 0.0 2.3 2 0 0 2 2 1 0 ParA/MinD ATPase like DUF2075 PF09848.4 gi|84489599|ref|YP_447831.1| - 0.21 10.5 8.2 0.049 12.6 1.6 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.10 gi|84489599|ref|YP_447831.1| - 0.52 10.1 19.9 0.03 14.1 8.2 3.0 2 2 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_17 PF13207.1 gi|84489599|ref|YP_447831.1| - 1.2 9.9 7.7 1.3 9.8 1.0 3.4 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|84489599|ref|YP_447831.1| - 2.7 8.3 15.7 0.6 10.4 2.5 3.8 2 2 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|84489599|ref|YP_447831.1| - 2.8 8.2 8.7 1.5 9.1 2.8 2.9 3 1 0 3 3 3 0 ABC transporter Filament PF00038.16 gi|84489600|ref|YP_447832.1| - 0.0062 16.0 9.9 0.0066 15.9 6.8 1.0 1 0 0 1 1 1 1 Intermediate filament protein ADIP PF11559.3 gi|84489600|ref|YP_447832.1| - 0.0065 16.3 13.6 0.0074 16.1 9.4 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Tropomyosin_1 PF12718.2 gi|84489600|ref|YP_447832.1| - 0.0086 15.9 14.4 0.012 15.4 9.9 1.3 1 0 0 1 1 1 1 Tropomyosin like Jnk-SapK_ap_N PF09744.4 gi|84489600|ref|YP_447832.1| - 0.012 15.6 12.1 0.013 15.5 8.4 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF3450 PF11932.3 gi|84489600|ref|YP_447832.1| - 0.016 14.5 6.9 0.015 14.5 4.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.16 gi|84489600|ref|YP_447832.1| - 0.017 15.0 20.2 0.06 13.3 2.6 2.4 1 1 2 3 3 3 0 bZIP transcription factor CCDC155 PF14662.1 gi|84489600|ref|YP_447832.1| - 0.018 14.6 13.0 0.018 14.6 9.0 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 Seryl_tRNA_N PF02403.17 gi|84489600|ref|YP_447832.1| - 0.029 14.4 15.6 0.033 14.1 10.8 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain IncA PF04156.9 gi|84489600|ref|YP_447832.1| - 0.03 13.8 11.1 0.052 13.1 7.7 1.4 1 1 0 1 1 1 0 IncA protein DUF641 PF04859.7 gi|84489600|ref|YP_447832.1| - 0.031 14.0 7.6 0.038 13.7 5.3 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) APG6 PF04111.7 gi|84489600|ref|YP_447832.1| - 0.064 12.3 14.9 0.066 12.2 10.3 1.0 1 0 0 1 1 1 0 Autophagy protein Apg6 Tropomyosin PF00261.15 gi|84489600|ref|YP_447832.1| - 0.067 12.2 10.8 0.099 11.7 7.4 1.4 1 1 0 1 1 1 0 Tropomyosin KLRAQ PF10205.4 gi|84489600|ref|YP_447832.1| - 0.067 13.2 8.9 0.081 12.9 6.2 1.1 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein TSC22 PF01166.13 gi|84489600|ref|YP_447832.1| - 0.068 13.1 15.6 0.087 12.8 5.1 2.6 1 1 2 3 3 3 0 TSC-22/dip/bun family CENP-F_leu_zip PF10473.4 gi|84489600|ref|YP_447832.1| - 0.15 11.9 13.3 0.18 11.6 9.2 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF904 PF06005.7 gi|84489600|ref|YP_447832.1| - 0.29 11.4 22.7 0.17 12.1 10.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF904) DUF972 PF06156.8 gi|84489600|ref|YP_447832.1| - 0.3 11.4 13.5 0.48 10.7 9.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF972) Spectrin PF00435.16 gi|84489600|ref|YP_447832.1| - 0.33 11.2 7.8 0.85 9.9 5.4 1.6 1 1 0 1 1 1 0 Spectrin repeat Sec20 PF03908.8 gi|84489600|ref|YP_447832.1| - 0.35 10.6 4.8 2.6 7.7 3.1 1.9 1 1 0 1 1 1 0 Sec20 DUF4200 PF13863.1 gi|84489600|ref|YP_447832.1| - 0.35 10.8 16.2 2.5 8.0 11.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) TBPIP PF07106.8 gi|84489600|ref|YP_447832.1| - 0.48 9.9 15.2 0.55 9.7 10.5 1.1 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Rootletin PF15035.1 gi|84489600|ref|YP_447832.1| - 0.5 10.3 12.0 0.81 9.6 8.3 1.3 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion DUF4164 PF13747.1 gi|84489600|ref|YP_447832.1| - 0.56 10.3 6.5 1.2 9.3 1.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) HDV_ag PF01517.13 gi|84489600|ref|YP_447832.1| - 0.59 9.7 5.4 0.82 9.3 3.7 1.5 1 1 0 1 1 1 0 Hepatitis delta virus delta antigen Tho2 PF11262.3 gi|84489600|ref|YP_447832.1| - 0.7 8.8 8.8 0.75 8.7 6.1 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4140 PF13600.1 gi|84489600|ref|YP_447832.1| - 0.78 10.2 5.1 0.46 10.9 1.1 1.8 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) BLOC1_2 PF10046.4 gi|84489600|ref|YP_447832.1| - 1.1 9.4 14.8 3.8 7.7 10.2 1.7 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_DNA_bd PF12329.3 gi|84489600|ref|YP_447832.1| - 1.2 9.0 20.7 15 5.4 14.3 2.0 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF771 PF05595.6 gi|84489600|ref|YP_447832.1| - 1.2 9.0 9.2 0.73 9.7 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF771) Cep57_MT_bd PF06657.8 gi|84489600|ref|YP_447832.1| - 1.3 9.0 8.1 21 5.1 5.5 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Striatin PF08232.7 gi|84489600|ref|YP_447832.1| - 1.4 9.2 11.9 0.22 11.8 3.0 2.0 1 1 1 2 2 2 0 Striatin family Pox_A_type_inc PF04508.7 gi|84489600|ref|YP_447832.1| - 1.6 8.6 6.0 0.43 10.5 0.7 2.7 2 2 1 3 3 3 0 Viral A-type inclusion protein repeat Fzo_mitofusin PF04799.8 gi|84489600|ref|YP_447832.1| - 1.7 8.0 9.2 3.4 7.0 6.4 1.6 1 1 0 1 1 1 0 fzo-like conserved region Syntaxin PF00804.20 gi|84489600|ref|YP_447832.1| - 2 8.6 11.2 4 7.6 7.8 1.6 1 1 0 1 1 1 0 Syntaxin DUF4337 PF14235.1 gi|84489600|ref|YP_447832.1| - 2.1 8.1 5.8 2.9 7.7 4.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF2046 PF09755.4 gi|84489600|ref|YP_447832.1| - 2.1 7.1 13.4 0.14 11.0 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein H4 (DUF2046) RE_Alw26IDE PF09665.5 gi|84489600|ref|YP_447832.1| - 2.3 6.8 9.1 2.2 6.9 6.3 1.0 1 0 0 1 1 1 0 Type II restriction endonuclease (RE_Alw26IDE) DivIC PF04977.10 gi|84489600|ref|YP_447832.1| - 2.6 7.6 17.8 0.75 9.3 5.7 2.6 1 1 2 3 3 3 0 Septum formation initiator DUF837 PF05769.6 gi|84489600|ref|YP_447832.1| - 2.6 7.5 16.8 3.6 7.0 7.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF837) DUF724 PF05266.9 gi|84489600|ref|YP_447832.1| - 2.7 7.5 12.1 4.3 6.9 8.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF2935 PF11155.3 gi|84489600|ref|YP_447832.1| - 4.6 7.3 8.4 9.2 6.3 5.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) DivIVA PF05103.8 gi|84489600|ref|YP_447832.1| - 6.1 6.9 15.4 0.97 9.4 4.4 2.0 1 1 1 2 2 2 0 DivIVA protein bZIP_2 PF07716.10 gi|84489600|ref|YP_447832.1| - 8.1 6.3 16.5 0.67 9.8 4.8 2.3 2 0 0 2 2 2 0 Basic region leucine zipper FlxA PF14282.1 gi|84489600|ref|YP_447832.1| - 8.1 6.4 13.0 11 5.9 9.0 1.3 1 1 0 1 1 1 0 FlxA-like protein Nitroreductase PF00881.19 gi|84489601|ref|YP_447833.1| - 6.1e-27 94.4 0.0 7.1e-27 94.2 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family PLDc_2 PF13091.1 gi|84489602|ref|YP_447834.1| - 0.0015 18.2 0.7 0.0033 17.1 0.5 1.5 1 0 0 1 1 1 1 PLD-like domain DUF1724 PF08350.5 gi|84489602|ref|YP_447834.1| - 0.0042 16.5 0.6 0.018 14.5 0.4 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_20 PF12840.2 gi|84489602|ref|YP_447834.1| - 0.013 15.3 0.0 0.039 13.7 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HemN_C PF06969.11 gi|84489602|ref|YP_447834.1| - 0.018 15.1 0.0 0.074 13.1 0.0 2.0 2 0 0 2 2 2 0 HemN C-terminal domain ESCRT-II PF05871.7 gi|84489602|ref|YP_447834.1| - 0.034 14.0 0.5 0.082 12.8 0.1 1.7 2 1 0 2 2 2 0 ESCRT-II complex subunit HTH_34 PF13601.1 gi|84489602|ref|YP_447834.1| - 0.036 14.0 1.4 0.27 11.3 0.2 2.7 2 1 1 3 3 3 0 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|84489602|ref|YP_447834.1| - 1 9.2 7.2 0.35 10.6 0.5 2.7 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_34 PF13601.1 gi|84489603|ref|YP_447835.1| - 4.6e-06 26.5 0.7 1.2e-05 25.2 0.5 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|84489603|ref|YP_447835.1| - 1.3e-05 24.4 0.4 2.9e-05 23.3 0.3 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF1724 PF08350.5 gi|84489603|ref|YP_447835.1| - 8.6e-05 21.9 0.0 0.00024 20.5 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|84489603|ref|YP_447835.1| - 0.00016 21.2 0.2 0.00033 20.2 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|84489603|ref|YP_447835.1| - 0.00029 20.4 0.6 0.0007 19.2 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|84489603|ref|YP_447835.1| - 0.0003 20.5 0.0 0.00049 19.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|84489603|ref|YP_447835.1| - 0.00032 20.3 0.3 0.0012 18.5 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_45 PF14947.1 gi|84489603|ref|YP_447835.1| - 0.0023 17.6 4.4 0.0023 17.6 3.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|84489603|ref|YP_447835.1| - 0.012 15.2 0.0 0.025 14.2 0.0 1.5 1 0 0 1 1 1 0 MarR family Strep_67kDa_ant PF06100.6 gi|84489603|ref|YP_447835.1| - 0.025 12.9 1.3 0.036 12.4 0.0 1.7 2 0 0 2 2 2 0 Streptococcal 67 kDa myosin-cross-reactive antigen like family HTH_IclR PF09339.5 gi|84489603|ref|YP_447835.1| - 0.043 13.4 0.0 0.41 10.2 0.0 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_11 PF08279.7 gi|84489603|ref|YP_447835.1| - 0.13 11.9 0.6 0.27 10.9 0.1 1.8 2 0 0 2 2 2 0 HTH domain Dicty_REP PF05086.7 gi|84489604|ref|YP_447836.1| - 1.2 6.8 9.3 1.3 6.6 6.4 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Ndc1_Nup PF09531.5 gi|84489604|ref|YP_447836.1| - 1.4 7.2 5.8 1.7 6.9 4.0 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Menin PF05053.8 gi|84489604|ref|YP_447836.1| - 1.7 6.6 7.6 2.4 6.2 5.3 1.2 1 0 0 1 1 1 0 Menin DUF763 PF05559.6 gi|84489605|ref|YP_447837.1| - 2.1e-137 457.3 0.0 2.5e-137 457.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) HHH PF00633.18 gi|84489605|ref|YP_447837.1| - 0.0021 17.6 0.1 0.005 16.4 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|84489605|ref|YP_447837.1| - 0.12 12.5 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain DNA_pol3_theta PF06440.6 gi|84489605|ref|YP_447837.1| - 0.13 11.8 0.4 0.53 9.9 0.3 1.9 1 1 0 1 1 1 0 DNA polymerase III, theta subunit FMN_red PF03358.10 gi|84489606|ref|YP_447838.1| - 3.7e-20 71.9 0.0 6e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489606|ref|YP_447838.1| - 1.3e-06 28.0 0.0 2.3e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|84489606|ref|YP_447838.1| - 0.00011 22.1 0.1 0.00039 20.4 0.0 2.0 1 1 0 1 1 1 1 Flavodoxin domain Lysine_decarbox PF03641.9 gi|84489607|ref|YP_447839.1| - 3.9e-36 123.7 0.1 4.7e-36 123.5 0.1 1.1 1 0 0 1 1 1 1 Possible lysine decarboxylase DUF1358 PF07096.6 gi|84489607|ref|YP_447839.1| - 0.046 13.3 0.0 0.088 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) Herpes_UL37_1 PF03970.8 gi|84489607|ref|YP_447839.1| - 0.066 12.0 0.1 0.27 9.9 0.0 1.8 2 0 0 2 2 2 0 Herpesvirus UL37 tegument protein Acetyltransf_9 PF13527.1 gi|84489608|ref|YP_447840.1| - 2.1e-12 47.0 0.0 2.7e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|84489608|ref|YP_447840.1| - 6.9e-10 38.9 0.0 1.2e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|84489608|ref|YP_447840.1| - 1.3e-08 34.7 0.0 2.8e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|84489608|ref|YP_447840.1| - 0.00013 22.1 0.0 0.00018 21.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|84489608|ref|YP_447840.1| - 0.0096 15.6 0.0 0.082 12.6 0.0 2.3 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|84489608|ref|YP_447840.1| - 0.041 13.7 0.0 0.11 12.3 0.0 1.7 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase MOZ_SAS PF01853.13 gi|84489608|ref|YP_447840.1| - 0.048 12.8 0.3 0.071 12.3 0.2 1.4 1 0 0 1 1 1 0 MOZ/SAS family GNAT_acetyltr_2 PF13718.1 gi|84489608|ref|YP_447840.1| - 0.061 12.6 0.0 0.12 11.6 0.0 1.4 1 1 0 1 1 1 0 GNAT acetyltransferase 2 HGTP_anticodon PF03129.15 gi|84489608|ref|YP_447840.1| - 0.11 12.4 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Anticodon binding domain DUF501 PF04417.7 gi|84489611|ref|YP_447843.1| - 0.061 13.1 0.2 0.1 12.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF501) ABC_tran PF00005.22 gi|84489612|ref|YP_447844.1| - 7.9e-23 81.2 0.0 1.3e-22 80.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489612|ref|YP_447844.1| - 9.5e-07 29.0 2.8 0.0043 17.0 0.3 2.3 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|84489612|ref|YP_447844.1| - 9.3e-05 22.5 0.1 0.00021 21.4 0.1 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|84489612|ref|YP_447844.1| - 0.00013 21.3 1.2 0.0082 15.3 0.0 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|84489612|ref|YP_447844.1| - 0.00027 20.1 0.0 0.0004 19.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|84489612|ref|YP_447844.1| - 0.0012 18.2 0.1 0.0026 17.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain UPF0079 PF02367.12 gi|84489612|ref|YP_447844.1| - 0.0023 17.5 0.0 0.0045 16.6 0.0 1.4 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 T2SE PF00437.15 gi|84489612|ref|YP_447844.1| - 0.0048 15.8 0.0 0.0065 15.4 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ArgK PF03308.11 gi|84489612|ref|YP_447844.1| - 0.0064 15.3 0.0 0.0094 14.7 0.0 1.2 1 0 0 1 1 1 1 ArgK protein AAA_17 PF13207.1 gi|84489612|ref|YP_447844.1| - 0.0094 16.7 0.0 0.012 16.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|84489612|ref|YP_447844.1| - 0.012 15.9 3.2 0.017 15.4 2.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|84489612|ref|YP_447844.1| - 0.013 15.8 0.0 0.03 14.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|84489612|ref|YP_447844.1| - 0.015 15.0 0.2 2.3 7.8 0.0 2.1 2 0 0 2 2 2 0 NTPase AAA_PrkA PF08298.6 gi|84489612|ref|YP_447844.1| - 0.016 13.9 0.0 0.022 13.4 0.0 1.2 1 0 0 1 1 1 0 PrkA AAA domain AAA_10 PF12846.2 gi|84489612|ref|YP_447844.1| - 0.029 13.8 0.3 0.18 11.2 0.1 1.9 2 0 0 2 2 2 0 AAA-like domain MobB PF03205.9 gi|84489612|ref|YP_447844.1| - 0.032 13.9 0.4 0.26 10.9 0.0 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|84489612|ref|YP_447844.1| - 0.033 13.0 0.1 0.19 10.5 0.0 1.9 2 0 0 2 2 2 0 NB-ARC domain ATP_bind_1 PF03029.12 gi|84489612|ref|YP_447844.1| - 0.059 12.9 0.2 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.18 gi|84489612|ref|YP_447844.1| - 0.088 12.7 1.5 0.61 10.0 1.0 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.17 gi|84489612|ref|YP_447844.1| - 0.11 12.7 0.2 0.19 11.9 0.2 1.6 1 1 0 1 1 1 0 RNA helicase PduV-EutP PF10662.4 gi|84489612|ref|YP_447844.1| - 0.14 11.6 0.1 0.29 10.5 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.1 gi|84489612|ref|YP_447844.1| - 0.15 11.3 0.0 0.6 9.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|84489613|ref|YP_447845.1| - 3.1e-22 79.3 0.1 4.2e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|84489613|ref|YP_447845.1| - 5.3e-15 55.5 0.6 9.7e-15 54.6 0.4 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|84489613|ref|YP_447845.1| - 4.9e-08 33.2 1.2 8.1e-06 26.0 0.1 2.2 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|84489613|ref|YP_447845.1| - 4.1e-05 23.6 0.0 7.2e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain PhoH PF02562.11 gi|84489613|ref|YP_447845.1| - 0.0019 17.4 0.1 0.13 11.4 0.0 2.2 2 0 0 2 2 2 1 PhoH-like protein Mg_chelatase PF01078.16 gi|84489613|ref|YP_447845.1| - 0.0024 17.0 0.0 0.0039 16.3 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.1 gi|84489613|ref|YP_447845.1| - 0.0028 17.8 0.2 0.014 15.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|84489613|ref|YP_447845.1| - 0.0033 16.6 0.2 0.012 14.7 0.2 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF2075 PF09848.4 gi|84489613|ref|YP_447845.1| - 0.0034 16.4 0.1 0.0044 16.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_29 PF13555.1 gi|84489613|ref|YP_447845.1| - 0.0043 16.5 0.1 0.011 15.2 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SE PF00437.15 gi|84489613|ref|YP_447845.1| - 0.017 14.0 0.1 0.058 12.2 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein IstB_IS21 PF01695.12 gi|84489613|ref|YP_447845.1| - 0.021 14.2 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_10 PF12846.2 gi|84489613|ref|YP_447845.1| - 0.023 14.1 0.3 0.064 12.6 0.2 1.6 1 1 1 2 2 2 0 AAA-like domain FtsK_SpoIIIE PF01580.13 gi|84489613|ref|YP_447845.1| - 0.051 13.0 0.0 0.081 12.3 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_23 PF13476.1 gi|84489613|ref|YP_447845.1| - 0.06 13.6 0.9 0.19 12.0 0.7 1.9 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|84489613|ref|YP_447845.1| - 0.069 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain DUF258 PF03193.11 gi|84489613|ref|YP_447845.1| - 0.075 12.2 0.3 0.21 10.7 0.1 1.9 2 1 0 2 2 2 0 Protein of unknown function, DUF258 DUF4353 PF14262.1 gi|84489613|ref|YP_447845.1| - 0.079 12.1 0.2 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4353) NB-ARC PF00931.17 gi|84489613|ref|YP_447845.1| - 0.12 11.2 0.0 0.21 10.4 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain DUF87 PF01935.12 gi|84489613|ref|YP_447845.1| - 0.69 9.6 6.3 5.5 6.7 4.4 2.4 1 1 0 1 1 1 0 Domain of unknown function DUF87 BPD_transp_1 PF00528.17 gi|84489614|ref|YP_447846.1| - 3e-20 72.5 8.2 3e-20 72.5 5.7 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF347 PF03988.7 gi|84489614|ref|YP_447846.1| - 4.7 7.1 7.6 0.76 9.7 0.6 3.0 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) BPD_transp_1 PF00528.17 gi|84489615|ref|YP_447847.1| - 3.1e-39 134.3 12.2 3.1e-39 134.3 8.4 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.17 gi|84489616|ref|YP_447848.1| - 1.6e-71 241.1 12.9 1.6e-71 241.1 9.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Acetyltransf_1 PF00583.19 gi|84489617|ref|YP_447849.1| - 2.5e-12 46.6 0.0 3.5e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.1 gi|84489617|ref|YP_447849.1| - 1.3e-08 34.9 1.7 1.3e-08 34.9 1.2 2.0 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|84489617|ref|YP_447849.1| - 1.2e-07 31.7 0.1 2e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|84489617|ref|YP_447849.1| - 0.00016 21.5 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|84489617|ref|YP_447849.1| - 0.00021 21.3 0.0 0.00031 20.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Clostridium_P47 PF06597.6 gi|84489617|ref|YP_447849.1| - 0.0067 14.9 4.2 0.0091 14.5 2.9 1.1 1 0 0 1 1 1 1 Clostridium P-47 protein GNAT_acetyltr_2 PF13718.1 gi|84489617|ref|YP_447849.1| - 0.054 12.8 0.1 0.15 11.4 0.1 1.7 1 1 0 1 1 1 0 GNAT acetyltransferase 2 IcmL PF11393.3 gi|84489617|ref|YP_447849.1| - 0.096 12.6 1.2 0.19 11.6 0.9 1.5 1 0 0 1 1 1 0 Macrophage killing protein with similarity to conjugation protein B12-binding_2 PF02607.12 gi|84489618|ref|YP_447850.1| - 2.6e-17 62.6 0.1 5e-17 61.7 0.1 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|84489618|ref|YP_447850.1| - 1.7e-15 56.9 0.1 2.9e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 B12 binding domain CTC1_2 PF15491.1 gi|84489618|ref|YP_447850.1| - 0.11 11.5 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 MtaB PF12176.3 gi|84489619|ref|YP_447851.1| - 3.2e-232 770.9 8.1 3.7e-232 770.7 5.6 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit PRAI PF00697.17 gi|84489619|ref|YP_447851.1| - 0.092 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Thioredoxin_3 PF13192.1 gi|84489620|ref|YP_447852.1| - 1.2e-16 60.2 0.3 1.4e-16 60.0 0.2 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|84489620|ref|YP_447852.1| - 1.3e-10 41.1 0.2 1.9e-10 40.5 0.2 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.15 gi|84489620|ref|YP_447852.1| - 1.1e-05 25.0 0.1 1.1e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.15 gi|84489620|ref|YP_447852.1| - 1.9e-05 24.3 0.1 0.0036 16.8 0.0 2.0 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.1 gi|84489620|ref|YP_447852.1| - 5.5e-05 23.2 0.7 0.085 12.8 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin DUF836 PF05768.9 gi|84489620|ref|YP_447852.1| - 8.6e-05 22.7 0.0 9.6e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.1 gi|84489620|ref|YP_447852.1| - 0.00019 21.6 0.5 0.0013 18.9 0.3 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain DUF1223 PF06764.6 gi|84489620|ref|YP_447852.1| - 0.0021 17.8 0.3 0.0093 15.7 0.1 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF1223) AhpC-TSA PF00578.16 gi|84489620|ref|YP_447852.1| - 0.045 13.4 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family TrbC_Ftype PF09673.5 gi|84489620|ref|YP_447852.1| - 0.09 12.3 0.0 0.097 12.2 0.0 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein DUF953 PF06110.6 gi|84489620|ref|YP_447852.1| - 0.1 12.0 0.4 0.47 9.8 0.3 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DUF955 PF06114.8 gi|84489621|ref|YP_447853.1| - 0.047 13.4 1.5 0.087 12.5 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF955) MarR PF01047.17 gi|84489623|ref|YP_447855.1| - 1e-08 34.7 0.0 2.3e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|84489623|ref|YP_447855.1| - 1.3e-05 24.7 0.0 2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HxlR PF01638.12 gi|84489623|ref|YP_447855.1| - 0.00011 21.7 0.1 0.00019 20.9 0.1 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.1 gi|84489623|ref|YP_447855.1| - 0.00021 21.2 0.2 0.00048 20.0 0.1 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|84489623|ref|YP_447855.1| - 0.00046 20.4 0.0 0.0012 19.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|84489623|ref|YP_447855.1| - 0.0024 17.6 0.0 0.0046 16.7 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Replic_Relax PF13814.1 gi|84489623|ref|YP_447855.1| - 0.0036 17.1 0.0 0.0058 16.5 0.0 1.4 1 1 0 1 1 1 1 Replication-relaxation NGF PF00243.13 gi|84489623|ref|YP_447855.1| - 0.0096 15.6 0.2 0.013 15.2 0.1 1.3 1 0 0 1 1 1 1 Nerve growth factor family DUF3116 PF11313.3 gi|84489623|ref|YP_447855.1| - 0.017 14.7 1.5 0.033 13.7 0.1 2.1 2 1 0 3 3 3 0 Protein of unknown function (DUF3116) PadR PF03551.9 gi|84489623|ref|YP_447855.1| - 0.043 13.5 0.0 0.11 12.2 0.0 1.8 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family GAT PF03127.9 gi|84489623|ref|YP_447855.1| - 0.049 13.6 1.3 5.1 7.1 0.0 2.5 1 1 2 3 3 3 0 GAT domain TrmB PF01978.14 gi|84489623|ref|YP_447855.1| - 0.091 12.4 0.0 0.21 11.3 0.0 1.7 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB MatE PF01554.13 gi|84489624|ref|YP_447856.1| - 2.7e-54 183.1 48.0 4.8e-29 101.0 12.6 2.8 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.1 gi|84489624|ref|YP_447856.1| - 6.3e-11 42.2 18.3 6.3e-11 42.2 12.7 4.8 4 1 1 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MRAP PF15183.1 gi|84489624|ref|YP_447856.1| - 0.46 10.1 0.0 0.46 10.1 0.0 3.7 2 1 1 3 3 3 0 Melanocortin-2 receptor accessory protein family DUF1490 PF07371.7 gi|84489625|ref|YP_447857.1| - 0.02 14.8 0.2 0.023 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) Hydrolase PF00702.21 gi|84489626|ref|YP_447858.1| - 2.6e-37 129.3 0.5 5.1e-37 128.3 0.4 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.15 gi|84489626|ref|YP_447858.1| - 3.5e-37 127.6 6.5 6.8e-37 126.6 4.5 1.5 1 0 0 1 1 1 1 E1-E2 ATPase HAD PF12710.2 gi|84489626|ref|YP_447858.1| - 5.6e-15 56.0 0.2 2.1e-14 54.1 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|84489626|ref|YP_447858.1| - 2.6e-06 27.1 0.1 2.6e-06 27.1 0.1 3.2 5 0 0 5 5 5 1 haloacid dehalogenase-like hydrolase DUF1510 PF07423.6 gi|84489627|ref|YP_447859.1| - 0.00078 18.8 4.4 0.00081 18.8 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) SpoIIIAH PF12685.2 gi|84489627|ref|YP_447859.1| - 0.00089 18.8 4.3 0.0011 18.5 3.0 1.0 1 0 0 1 1 1 1 SpoIIIAH-like protein OATP PF03137.15 gi|84489627|ref|YP_447859.1| - 0.01 13.8 0.2 0.011 13.8 0.1 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Ly49 PF08391.5 gi|84489627|ref|YP_447859.1| - 0.015 15.4 0.3 0.023 14.8 0.2 1.3 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region ABC2_membrane_3 PF12698.2 gi|84489627|ref|YP_447859.1| - 0.019 13.9 3.5 0.022 13.7 2.4 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Mem_trans PF03547.13 gi|84489627|ref|YP_447859.1| - 0.022 13.0 3.7 0.023 13.0 2.6 1.0 1 0 0 1 1 1 0 Membrane transport protein Tetraspannin PF00335.15 gi|84489627|ref|YP_447859.1| - 0.03 13.5 0.3 0.035 13.3 0.2 1.1 1 0 0 1 1 1 0 Tetraspanin family TMEM192 PF14802.1 gi|84489627|ref|YP_447859.1| - 0.055 12.3 0.1 0.066 12.0 0.1 1.1 1 0 0 1 1 1 0 TMEM192 family DUF4094 PF13334.1 gi|84489627|ref|YP_447859.1| - 0.062 13.6 0.4 0.074 13.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) SHR3_chaperone PF08229.6 gi|84489627|ref|YP_447859.1| - 0.11 11.3 0.0 0.18 10.7 0.0 1.3 1 1 0 1 1 1 0 ER membrane protein SH3 SID-1_RNA_chan PF13965.1 gi|84489627|ref|YP_447859.1| - 0.12 10.4 0.9 0.13 10.4 0.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TarH PF02203.10 gi|84489627|ref|YP_447859.1| - 0.37 10.6 3.1 0.46 10.3 2.1 1.4 1 1 0 1 1 1 0 Tar ligand binding domain homologue Sigma_reg_N PF13800.1 gi|84489627|ref|YP_447859.1| - 0.92 9.5 3.8 1.4 9.0 2.6 1.5 1 1 0 1 1 1 0 Sigma factor regulator N-terminal DUF4525 PF15027.1 gi|84489628|ref|YP_447860.1| - 0.033 13.7 0.1 0.05 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Methyltransf_12 PF08242.7 gi|84489628|ref|YP_447860.1| - 0.26 11.7 1.3 0.54 10.7 0.6 1.8 1 1 0 1 1 1 0 Methyltransferase domain DUF3816 PF12822.2 gi|84489629|ref|YP_447861.1| - 0.054 13.3 21.1 0.078 12.8 5.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3816) CbiM PF01891.11 gi|84489629|ref|YP_447861.1| - 0.13 11.8 4.9 0.16 11.5 3.4 1.1 1 0 0 1 1 1 0 Cobalt uptake substrate-specific transmembrane region H_PPase PF03030.11 gi|84489629|ref|YP_447861.1| - 0.13 10.5 1.8 0.2 9.8 1.2 1.3 1 1 0 1 1 1 0 Inorganic H+ pyrophosphatase SBF PF01758.11 gi|84489629|ref|YP_447861.1| - 0.16 11.3 8.1 0.18 11.1 5.6 1.0 1 0 0 1 1 1 0 Sodium Bile acid symporter family MARVEL PF01284.18 gi|84489629|ref|YP_447861.1| - 0.32 10.7 6.6 0.69 9.7 3.7 2.0 1 1 1 2 2 2 0 Membrane-associating domain DUF2306 PF10067.4 gi|84489629|ref|YP_447861.1| - 4 7.6 7.8 1.7 8.8 0.1 2.7 1 1 2 3 3 3 0 Predicted membrane protein (DUF2306) DUF3021 PF11457.3 gi|84489629|ref|YP_447861.1| - 5.4 6.8 12.6 42 4.0 8.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3021) DUF4131 PF13567.1 gi|84489629|ref|YP_447861.1| - 9.4 5.6 12.0 29 3.9 8.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) TrkH PF02386.11 gi|84489630|ref|YP_447862.1| - 1.7e-42 145.2 41.5 5.1e-41 140.4 20.1 2.8 1 1 0 3 3 3 2 Cation transport protein Cas_TM1802 PF09484.5 gi|84489631|ref|YP_447863.1| - 5.1e-20 71.5 1.9 5.9e-20 71.3 1.3 1.0 1 0 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) DNA_PPF PF02916.10 gi|84489631|ref|YP_447863.1| - 0.014 15.4 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase processivity factor RE_EcoO109I PF14511.1 gi|84489631|ref|YP_447863.1| - 0.014 14.7 0.4 0.022 14.1 0.3 1.3 1 1 0 1 1 1 0 Type II restriction endonuclease EcoO109I BCDHK_Adom3 PF10436.4 gi|84489632|ref|YP_447864.1| - 0.0095 15.4 2.6 0.014 14.9 1.7 1.4 1 1 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase MCPsignal PF00015.16 gi|84489632|ref|YP_447864.1| - 0.089 12.3 0.1 0.2 11.1 0.1 1.5 1 1 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC37_C PF08564.5 gi|84489632|ref|YP_447864.1| - 0.46 10.3 3.6 4.2 7.2 0.1 3.2 2 1 1 3 3 3 0 Cdc37 C terminal domain DUF2098 PF09871.4 gi|84489632|ref|YP_447864.1| - 1.1 9.2 4.4 0.71 9.8 1.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2098) Gal4_dimer PF03902.8 gi|84489632|ref|YP_447864.1| - 2.2 8.2 4.7 2.7 7.9 0.1 2.8 2 1 1 3 3 3 0 Gal4-like dimerisation domain Ion_trans_2 PF07885.11 gi|84489633|ref|YP_447865.1| - 1.8e-13 49.9 9.0 1.8e-13 49.9 6.2 2.6 2 0 0 2 2 2 1 Ion channel Kinetocho_Slk19 PF12709.2 gi|84489633|ref|YP_447865.1| - 0.00033 20.6 3.9 0.00059 19.8 2.7 1.4 1 0 0 1 1 1 1 Central kinetochore-associated Lig_chan PF00060.21 gi|84489633|ref|YP_447865.1| - 0.00069 19.3 0.2 0.00069 19.3 0.1 1.7 2 0 0 2 2 2 1 Ligand-gated ion channel IncA PF04156.9 gi|84489633|ref|YP_447865.1| - 0.00083 19.0 0.1 0.00083 19.0 0.0 1.7 2 0 0 2 2 2 1 IncA protein NPV_P10 PF05531.7 gi|84489633|ref|YP_447865.1| - 0.0022 18.2 1.6 0.0051 17.0 1.1 1.6 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein Tropomyosin_1 PF12718.2 gi|84489633|ref|YP_447865.1| - 0.038 13.8 4.5 0.052 13.3 3.1 1.2 1 0 0 1 1 1 0 Tropomyosin like Cortex-I_coil PF09304.5 gi|84489633|ref|YP_447865.1| - 0.039 13.9 3.0 0.061 13.3 2.1 1.2 1 0 0 1 1 1 0 Cortexillin I, coiled coil Allexi_40kDa PF05549.6 gi|84489633|ref|YP_447865.1| - 0.079 12.2 0.7 0.11 11.8 0.5 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein TMF_DNA_bd PF12329.3 gi|84489633|ref|YP_447865.1| - 0.08 12.7 5.1 0.13 12.0 3.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding HALZ PF02183.13 gi|84489633|ref|YP_447865.1| - 0.099 12.3 3.1 0.12 12.0 0.8 2.1 2 0 0 2 2 2 0 Homeobox associated leucine zipper DivIC PF04977.10 gi|84489633|ref|YP_447865.1| - 0.14 11.6 6.0 0.36 10.3 2.2 3.0 2 1 0 2 2 2 0 Septum formation initiator Matrilin_ccoil PF10393.4 gi|84489633|ref|YP_447865.1| - 0.29 10.5 2.2 0.26 10.7 0.6 1.6 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin bZIP_2 PF07716.10 gi|84489633|ref|YP_447865.1| - 0.36 10.6 3.4 0.41 10.5 0.8 2.0 2 0 0 2 2 2 0 Basic region leucine zipper Snapin_Pallidin PF14712.1 gi|84489633|ref|YP_447865.1| - 0.5 10.7 5.5 0.33 11.2 2.3 1.7 2 0 0 2 2 2 0 Snapin/Pallidin Ion_trans_2 PF07885.11 gi|84489634|ref|YP_447866.1| - 6.7e-11 41.7 14.4 6.7e-11 41.7 10.0 2.2 2 1 0 2 2 2 1 Ion channel Lig_chan PF00060.21 gi|84489634|ref|YP_447866.1| - 0.0077 15.9 2.8 0.0077 15.9 1.9 1.7 2 0 0 2 2 2 1 Ligand-gated ion channel FlaC_arch PF05377.6 gi|84489634|ref|YP_447866.1| - 0.11 12.3 1.8 0.21 11.5 1.3 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF4446 PF14584.1 gi|84489634|ref|YP_447866.1| - 0.14 12.0 0.2 0.14 12.0 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Chlam_PMP PF02415.12 gi|84489635|ref|YP_447867.1| - 0.0054 16.9 1.0 0.0054 16.9 0.7 5.0 4 0 0 4 4 4 1 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat GATase_4 PF13230.1 gi|84489638|ref|YP_447870.1| - 1.6e-68 230.3 0.4 6.5e-62 208.6 0.3 2.0 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|84489638|ref|YP_447870.1| - 2.1e-10 40.6 0.0 3.5e-10 39.9 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|84489638|ref|YP_447870.1| - 1.4e-07 30.5 0.0 2.4e-07 29.8 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferases class-II DUF4460 PF14687.1 gi|84489638|ref|YP_447870.1| - 0.049 13.3 0.4 0.15 11.7 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4460) DUF4065 PF13274.1 gi|84489640|ref|YP_447872.1| - 6.1e-08 33.3 0.5 8.4e-08 32.8 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4065) Antifungal_prot PF11402.3 gi|84489640|ref|YP_447872.1| - 0.048 13.8 0.8 0.077 13.1 0.6 1.3 1 0 0 1 1 1 0 Antifungal protein DXP_redisom_C PF08436.7 gi|84489641|ref|YP_447873.1| - 0.026 14.4 0.1 0.23 11.3 0.0 2.2 1 1 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal DUF2373 PF10180.4 gi|84489642|ref|YP_447874.1| - 0.084 12.4 1.2 0.42 10.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2373) DUF3692 PF12469.3 gi|84489642|ref|YP_447874.1| - 0.088 13.0 0.3 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 CRISPR-associated protein Flavodoxin_3 PF12641.2 gi|84489643|ref|YP_447875.1| - 1.2e-08 34.5 0.6 1.2e-07 31.3 0.1 1.9 1 1 1 2 2 2 1 Flavodoxin domain Flavodoxin_5 PF12724.2 gi|84489643|ref|YP_447875.1| - 1.1e-06 28.7 0.0 1.3e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|84489643|ref|YP_447875.1| - 9.3e-05 22.4 0.3 0.0017 18.3 0.2 2.1 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_4 PF12682.2 gi|84489643|ref|YP_447875.1| - 0.00013 21.3 0.2 0.16 11.3 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin FMN_red PF03358.10 gi|84489644|ref|YP_447876.1| - 5.6e-24 84.3 0.0 6.8e-24 84.1 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489644|ref|YP_447876.1| - 8.3e-19 67.8 0.0 1e-18 67.5 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.20 gi|84489644|ref|YP_447876.1| - 0.0043 17.0 0.1 0.0061 16.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|84489644|ref|YP_447876.1| - 0.035 14.1 0.0 0.055 13.4 0.0 1.5 1 0 0 1 1 1 0 Flavodoxin domain Abhydrolase_5 PF12695.2 gi|84489645|ref|YP_447877.1| - 8.2e-18 64.5 0.0 1.2e-17 64.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|84489645|ref|YP_447877.1| - 1.5e-13 51.2 0.0 7.9e-13 48.8 0.0 1.8 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|84489645|ref|YP_447877.1| - 5.4e-13 48.6 0.0 7.1e-13 48.2 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family UPF0227 PF05728.7 gi|84489645|ref|YP_447877.1| - 2.3e-07 30.7 0.0 3.1e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_2 PF02230.11 gi|84489645|ref|YP_447877.1| - 1.5e-05 24.5 0.0 0.0043 16.5 0.0 2.6 2 1 1 3 3 3 1 Phospholipase/Carboxylesterase AXE1 PF05448.7 gi|84489645|ref|YP_447877.1| - 1.8e-05 23.4 0.0 0.00079 18.0 0.0 2.2 1 1 1 2 2 2 1 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.15 gi|84489645|ref|YP_447877.1| - 2.5e-05 23.9 0.1 0.00017 21.2 0.0 1.8 1 1 1 2 2 2 1 alpha/beta hydrolase fold DUF1100 PF06500.6 gi|84489645|ref|YP_447877.1| - 0.00011 20.8 0.0 0.00011 20.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) DUF676 PF05057.9 gi|84489645|ref|YP_447877.1| - 0.00022 20.5 0.5 0.00063 19.1 0.1 1.8 1 1 1 2 2 2 1 Putative serine esterase (DUF676) Abhydrolase_3 PF07859.8 gi|84489645|ref|YP_447877.1| - 0.00065 19.3 0.0 0.0014 18.2 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S15 PF02129.13 gi|84489645|ref|YP_447877.1| - 0.0018 17.7 0.0 0.012 15.0 0.0 1.8 1 1 1 2 2 2 1 X-Pro dipeptidyl-peptidase (S15 family) DUF2974 PF11187.3 gi|84489645|ref|YP_447877.1| - 0.005 16.2 0.0 0.0076 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Esterase_phd PF10503.4 gi|84489645|ref|YP_447877.1| - 0.012 14.9 0.0 0.023 13.9 0.0 1.7 1 1 0 1 1 1 0 Esterase PHB depolymerase Hydrolase_4 PF12146.3 gi|84489645|ref|YP_447877.1| - 0.017 14.9 0.0 0.058 13.2 0.0 1.9 2 0 0 2 2 2 0 Putative lysophospholipase BAAT_C PF08840.6 gi|84489645|ref|YP_447877.1| - 0.029 14.0 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Lipase_3 PF01764.20 gi|84489645|ref|YP_447877.1| - 0.054 13.1 0.0 0.075 12.6 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) PGAP1 PF07819.8 gi|84489645|ref|YP_447877.1| - 0.081 12.5 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein DUF3089 PF11288.3 gi|84489645|ref|YP_447877.1| - 0.089 11.9 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Acetyltransf_7 PF13508.1 gi|84489646|ref|YP_447878.1| - 0.019 15.1 0.0 0.046 13.8 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|84489646|ref|YP_447878.1| - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family ABC_tran PF00005.22 gi|84489647|ref|YP_447879.1| - 5.6e-22 78.5 0.0 7.4e-22 78.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489647|ref|YP_447879.1| - 1.1e-07 32.1 0.6 0.011 15.6 0.0 2.3 1 1 1 2 2 2 2 AAA domain AAA_10 PF12846.2 gi|84489647|ref|YP_447879.1| - 5.2e-07 29.3 0.0 0.0022 17.4 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_17 PF13207.1 gi|84489647|ref|YP_447879.1| - 0.00056 20.7 0.1 0.00097 19.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.4 gi|84489647|ref|YP_447879.1| - 0.00056 19.4 0.1 0.001 18.5 0.0 1.4 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.1 gi|84489647|ref|YP_447879.1| - 0.0023 18.0 0.1 0.0053 16.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain UPF0079 PF02367.12 gi|84489647|ref|YP_447879.1| - 0.0026 17.3 0.0 0.0044 16.6 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 AAA PF00004.24 gi|84489647|ref|YP_447879.1| - 0.0033 17.6 0.2 0.0073 16.5 0.1 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.1 gi|84489647|ref|YP_447879.1| - 0.0038 16.3 3.7 0.083 11.9 0.8 2.1 2 0 0 2 2 2 1 AAA ATPase domain NB-ARC PF00931.17 gi|84489647|ref|YP_447879.1| - 0.0043 15.9 0.0 0.01 14.6 0.0 1.6 2 0 0 2 2 2 1 NB-ARC domain AAA_18 PF13238.1 gi|84489647|ref|YP_447879.1| - 0.0046 17.2 0.3 0.0077 16.5 0.2 1.5 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|84489647|ref|YP_447879.1| - 0.0072 15.2 0.0 0.0097 14.8 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein DUF258 PF03193.11 gi|84489647|ref|YP_447879.1| - 0.0077 15.4 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 PRK PF00485.13 gi|84489647|ref|YP_447879.1| - 0.029 13.9 0.1 0.042 13.4 0.1 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.1 gi|84489647|ref|YP_447879.1| - 0.036 14.3 1.9 0.051 13.9 1.3 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|84489647|ref|YP_447879.1| - 0.051 13.7 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase ATP-synt_ab PF00006.20 gi|84489647|ref|YP_447879.1| - 0.062 12.7 0.5 0.24 10.8 0.1 1.8 1 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_14 PF13173.1 gi|84489647|ref|YP_447879.1| - 0.089 12.6 0.5 0.97 9.3 0.1 2.2 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|84489647|ref|YP_447879.1| - 0.09 12.4 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|84489647|ref|YP_447879.1| - 0.1 11.7 0.2 0.22 10.6 0.0 1.6 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.22 gi|84489648|ref|YP_447880.1| - 4.5e-23 82.0 0.0 6.4e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|84489648|ref|YP_447880.1| - 3.9e-09 36.7 0.0 7.3e-09 35.8 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_16 PF13191.1 gi|84489648|ref|YP_447880.1| - 1.5e-06 28.3 0.0 2.1e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.1 gi|84489648|ref|YP_447880.1| - 1.7e-06 28.2 1.2 0.00057 19.9 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|84489648|ref|YP_447880.1| - 9.3e-05 21.7 0.2 0.00015 21.0 0.1 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|84489648|ref|YP_447880.1| - 0.00086 19.4 0.1 0.0019 18.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|84489648|ref|YP_447880.1| - 0.0011 18.1 0.3 0.0051 15.9 0.1 1.9 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_29 PF13555.1 gi|84489648|ref|YP_447880.1| - 0.0058 16.1 0.1 0.012 15.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|84489648|ref|YP_447880.1| - 0.0058 16.9 0.4 0.26 11.5 0.1 2.1 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|84489648|ref|YP_447880.1| - 0.011 15.1 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF258 PF03193.11 gi|84489648|ref|YP_447880.1| - 0.023 13.9 0.1 0.048 12.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function, DUF258 AAA_19 PF13245.1 gi|84489648|ref|YP_447880.1| - 0.054 13.2 0.0 0.096 12.4 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain Sigma54_activat PF00158.21 gi|84489648|ref|YP_447880.1| - 0.067 12.6 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain T2SE PF00437.15 gi|84489648|ref|YP_447880.1| - 0.085 11.7 0.2 0.21 10.4 0.1 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein PhoH PF02562.11 gi|84489648|ref|YP_447880.1| - 0.1 11.8 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein DUF87 PF01935.12 gi|84489648|ref|YP_447880.1| - 0.15 11.8 3.1 0.11 12.2 0.5 1.9 1 1 1 2 2 2 0 Domain of unknown function DUF87 AAA PF00004.24 gi|84489648|ref|YP_447880.1| - 0.18 11.9 1.1 3.7 7.7 0.7 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BPD_transp_1 PF00528.17 gi|84489649|ref|YP_447881.1| - 1.8e-16 60.1 11.6 1.8e-16 60.1 8.1 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2244 PF10003.4 gi|84489649|ref|YP_447881.1| - 4.9 6.5 11.8 3.7 6.9 1.2 3.2 3 0 0 3 3 3 0 Integral membrane protein (DUF2244) BPD_transp_1 PF00528.17 gi|84489650|ref|YP_447882.1| - 6.5e-38 130.1 12.8 6.5e-38 130.1 8.8 2.1 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.17 gi|84489651|ref|YP_447883.1| - 2e-74 250.6 4.6 2.7e-74 250.2 3.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Ferritin PF00210.19 gi|84489652|ref|YP_447884.1| - 6.7e-37 126.3 5.1 7.8e-37 126.1 3.5 1.1 1 0 0 1 1 1 1 Ferritin-like domain DUF4165 PF13752.1 gi|84489653|ref|YP_447885.1| - 0.0055 16.4 0.2 0.013 15.2 0.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4165) DUF2717 PF10911.3 gi|84489653|ref|YP_447885.1| - 0.017 14.6 0.0 0.042 13.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) ABC2_membrane_3 PF12698.2 gi|84489653|ref|YP_447885.1| - 0.096 11.6 2.1 0.13 11.2 1.4 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF3671 PF12420.3 gi|84489653|ref|YP_447885.1| - 0.29 11.1 2.8 0.78 9.7 2.0 1.7 1 0 0 1 1 1 0 Protein of unknown function DUF4097 PF13349.1 gi|84489653|ref|YP_447885.1| - 2.7 7.5 13.5 46 3.5 9.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4097) polyprenyl_synt PF00348.12 gi|84489654|ref|YP_447886.1| - 1e-72 244.1 0.3 1.4e-72 243.6 0.2 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Lactamase_B PF00753.22 gi|84489655|ref|YP_447887.1| - 4.5e-21 75.4 0.3 1.2e-20 74.0 0.3 1.6 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|84489655|ref|YP_447887.1| - 2.7e-11 43.3 0.8 6.5e-09 35.6 0.5 2.2 2 0 0 2 2 2 2 Beta-lactamase superfamily domain RMMBL PF07521.7 gi|84489655|ref|YP_447887.1| - 5.6e-09 35.6 0.1 1.5e-08 34.3 0.1 1.8 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase FMN_dh PF01070.13 gi|84489656|ref|YP_447888.1| - 2.7e-34 118.6 0.0 1.2e-23 83.5 0.0 2.5 1 1 1 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|84489656|ref|YP_447888.1| - 8.4e-08 31.4 3.7 0.00021 20.3 0.9 2.8 1 1 1 2 2 2 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.12 gi|84489656|ref|YP_447888.1| - 2.7e-06 26.5 1.4 3.6e-06 26.1 0.4 1.5 2 0 0 2 2 2 1 Conserved region in glutamate synthase NMO PF03060.10 gi|84489656|ref|YP_447888.1| - 0.00013 21.2 0.3 0.0003 20.0 0.2 1.7 2 0 0 2 2 2 1 Nitronate monooxygenase ThiG PF05690.9 gi|84489656|ref|YP_447888.1| - 0.0075 15.3 3.2 0.21 10.6 0.0 2.7 2 1 1 3 3 3 2 Thiazole biosynthesis protein ThiG DUF561 PF04481.7 gi|84489656|ref|YP_447888.1| - 0.0093 14.9 0.1 0.023 13.6 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF561) SOR_SNZ PF01680.12 gi|84489656|ref|YP_447888.1| - 0.015 14.8 0.2 0.033 13.7 0.1 1.5 1 0 0 1 1 1 0 SOR/SNZ family AA_kinase PF00696.23 gi|84489657|ref|YP_447889.1| - 7e-44 150.1 1.1 8e-44 149.9 0.8 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.21 gi|84489658|ref|YP_447890.1| - 1.5e-14 53.8 0.1 2.9e-14 52.8 0.0 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|84489658|ref|YP_447890.1| - 8e-14 51.6 0.0 5.5e-13 48.9 0.0 2.1 2 0 0 2 2 2 1 GHMP kinases C terminal HI0933_like PF03486.9 gi|84489658|ref|YP_447890.1| - 0.014 13.8 0.2 3 6.2 0.0 2.3 2 0 0 2 2 2 0 HI0933-like protein GalKase_gal_bdg PF10509.4 gi|84489658|ref|YP_447890.1| - 0.019 14.2 0.0 0.051 12.8 0.0 1.7 1 0 0 1 1 1 0 Galactokinase galactose-binding signature DUF4266 PF14086.1 gi|84489658|ref|YP_447890.1| - 0.47 10.9 2.7 0.46 11.0 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4266) Memo PF01875.12 gi|84489659|ref|YP_447891.1| - 1.5e-77 260.1 0.8 1.7e-77 259.9 0.6 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.13 gi|84489659|ref|YP_447891.1| - 0.0013 17.8 0.0 0.0038 16.2 0.0 1.8 1 1 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase APG12 PF04110.8 gi|84489659|ref|YP_447891.1| - 0.018 15.2 2.0 0.023 14.8 0.4 2.0 2 0 0 2 2 2 0 Ubiquitin-like autophagy protein Apg12 Duffy_binding PF05424.6 gi|84489659|ref|YP_447891.1| - 0.23 11.2 2.8 2.4 7.9 0.0 2.3 2 0 0 2 2 2 0 Duffy binding domain Ribosomal_S2 PF00318.15 gi|84489660|ref|YP_447892.1| - 3.2e-41 140.8 0.1 8e-38 129.7 0.1 2.0 1 1 0 1 1 1 1 Ribosomal protein S2 Fer4 PF00037.22 gi|84489661|ref|YP_447893.1| - 2.5e-08 33.1 16.9 2.7e-06 26.7 5.0 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489661|ref|YP_447893.1| - 1.6e-06 27.7 30.3 4e-05 23.3 10.8 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489661|ref|YP_447893.1| - 1.8e-06 28.2 13.6 7.2e-06 26.2 9.7 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489661|ref|YP_447893.1| - 6.6e-06 26.2 14.5 1.8e-05 24.8 10.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489661|ref|YP_447893.1| - 2.7e-05 23.8 18.7 0.0042 16.9 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489661|ref|YP_447893.1| - 6.2e-05 22.6 14.6 0.0054 16.5 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84489661|ref|YP_447893.1| - 6.3e-05 22.9 17.6 0.017 15.4 5.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84489661|ref|YP_447893.1| - 0.00013 22.6 13.0 0.011 16.4 4.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|84489661|ref|YP_447893.1| - 0.00015 21.5 16.6 0.0004 20.1 11.5 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489661|ref|YP_447893.1| - 0.012 15.9 19.0 0.039 14.3 5.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489661|ref|YP_447893.1| - 0.017 15.4 14.2 0.041 14.2 3.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489661|ref|YP_447893.1| - 0.022 14.7 14.5 0.19 11.7 10.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489661|ref|YP_447893.1| - 0.06 13.9 21.7 0.55 10.9 8.0 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|84489661|ref|YP_447893.1| - 0.09 12.6 5.9 0.11 12.3 4.1 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84489661|ref|YP_447893.1| - 3.5 8.0 16.8 2.9 8.3 4.7 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Enolase_C PF00113.17 gi|84489662|ref|YP_447894.1| - 4.5e-79 265.4 0.2 4.5e-79 265.4 0.1 1.3 2 0 0 2 2 2 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|84489662|ref|YP_447894.1| - 8.4e-43 145.4 0.1 1.7e-42 144.4 0.1 1.6 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE PF01188.16 gi|84489662|ref|YP_447894.1| - 0.0041 17.6 0.0 0.0086 16.5 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain 5_3_exonuc_N PF02739.11 gi|84489662|ref|YP_447894.1| - 0.0059 16.0 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain MR_MLE_C PF13378.1 gi|84489662|ref|YP_447894.1| - 0.017 15.0 0.1 0.051 13.5 0.0 1.8 2 0 0 2 2 2 0 Enolase C-terminal domain-like RNA_pol_Rpb6 PF01192.17 gi|84489663|ref|YP_447895.1| - 3.8e-18 64.9 0.1 4.2e-18 64.8 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 RNA_pol_N PF01194.12 gi|84489664|ref|YP_447896.1| - 7.5e-26 89.9 0.3 7.8e-26 89.8 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Ribosomal_S9 PF00380.14 gi|84489665|ref|YP_447897.1| - 6.9e-35 119.9 0.4 7.9e-35 119.7 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.13 gi|84489666|ref|YP_447898.1| - 3.6e-24 85.2 0.0 4.5e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18e PF00828.14 gi|84489667|ref|YP_447899.1| - 6.4e-16 58.8 0.3 7.8e-16 58.6 0.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 RNA_pol_A_bac PF01000.21 gi|84489668|ref|YP_447900.1| - 2.1e-30 105.1 1.0 3.7e-29 101.1 0.0 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|84489668|ref|YP_447900.1| - 3.5e-16 58.0 0.0 4.4e-16 57.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L_2 PF13656.1 gi|84489668|ref|YP_447900.1| - 0.037 13.4 0.1 3.7 7.0 0.0 2.9 3 0 0 3 3 3 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_S11 PF00411.14 gi|84489669|ref|YP_447901.1| - 9.9e-40 135.1 0.5 1.2e-39 134.8 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 S4 PF01479.20 gi|84489670|ref|YP_447902.1| - 1.1e-10 40.8 0.0 2.7e-10 39.4 0.0 1.6 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.14 gi|84489670|ref|YP_447902.1| - 0.0033 17.7 0.8 0.0088 16.3 0.6 1.8 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S13 PF00416.17 gi|84489671|ref|YP_447903.1| - 1e-31 109.5 0.2 1.2e-31 109.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 TruB_N PF01509.13 gi|84489672|ref|YP_447904.1| - 1.8e-27 96.3 0.7 3.6e-24 85.6 0.5 3.2 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) DKCLD PF08068.7 gi|84489672|ref|YP_447904.1| - 5.2e-17 61.5 0.9 1.3e-16 60.2 0.3 1.9 2 0 0 2 2 2 1 DKCLD (NUC011) domain PUA PF01472.15 gi|84489672|ref|YP_447904.1| - 7e-17 60.9 0.2 1.7e-16 59.7 0.2 1.7 1 0 0 1 1 1 1 PUA domain FAD_binding_3 PF01494.14 gi|84489673|ref|YP_447905.1| - 9.9e-15 54.4 0.3 1.1e-06 28.0 0.0 2.8 2 1 0 2 2 2 2 FAD binding domain DAO PF01266.19 gi|84489673|ref|YP_447905.1| - 9.8e-11 41.1 0.2 1.9e-05 23.7 0.1 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|84489673|ref|YP_447905.1| - 1.3e-10 40.4 0.1 4e-06 25.7 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_oxidored PF12831.2 gi|84489673|ref|YP_447905.1| - 1.9e-09 37.1 0.4 2.7e-09 36.6 0.2 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|84489673|ref|YP_447905.1| - 9.6e-09 34.1 2.0 6.6e-08 31.4 0.4 2.1 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|84489673|ref|YP_447905.1| - 7.9e-07 28.3 0.0 1.4e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_2 PF00890.19 gi|84489673|ref|YP_447905.1| - 9.3e-07 28.0 0.5 1.8e-06 27.1 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|84489673|ref|YP_447905.1| - 1.8e-06 28.0 2.4 8.1e-06 25.8 1.7 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|84489673|ref|YP_447905.1| - 6.7e-05 21.9 0.5 6.7e-05 21.9 0.4 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|84489673|ref|YP_447905.1| - 9.3e-05 22.3 0.1 0.00041 20.3 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.1 gi|84489673|ref|YP_447905.1| - 0.00017 21.6 0.0 0.00039 20.5 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|84489673|ref|YP_447905.1| - 0.00093 18.3 1.2 0.0022 17.1 0.2 2.0 2 0 0 2 2 2 1 Thi4 family AlaDh_PNT_C PF01262.16 gi|84489673|ref|YP_447905.1| - 0.0032 17.0 0.6 0.0078 15.7 0.2 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.13 gi|84489673|ref|YP_447905.1| - 0.011 15.3 0.4 0.026 14.1 0.3 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|84489673|ref|YP_447905.1| - 0.035 14.4 0.3 0.27 11.6 0.1 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.1 gi|84489673|ref|YP_447905.1| - 0.08 13.2 0.3 0.19 12.0 0.1 1.9 2 1 0 2 2 2 0 Putative NAD(P)-binding INTS5_N PF14837.1 gi|84489673|ref|YP_447905.1| - 0.14 11.5 0.0 0.27 10.5 0.0 1.5 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus Shikimate_DH PF01488.15 gi|84489673|ref|YP_447905.1| - 0.19 11.8 0.9 1.2 9.2 0.3 2.3 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase H-K_ATPase_N PF09040.6 gi|84489673|ref|YP_447905.1| - 0.78 9.9 5.0 0.83 9.8 0.4 2.6 2 0 0 2 2 2 0 Gastric H+/K+-ATPase, N terminal domain AAA_27 PF13514.1 gi|84489674|ref|YP_447906.1| - 7.7e-06 23.9 12.5 8.4e-06 23.8 8.7 1.0 1 0 0 1 1 1 1 AAA domain DUF4200 PF13863.1 gi|84489674|ref|YP_447906.1| - 2.3e-05 24.3 33.9 0.069 13.0 3.1 3.8 1 1 2 3 3 3 3 Domain of unknown function (DUF4200) FlxA PF14282.1 gi|84489674|ref|YP_447906.1| - 3.3e-05 23.7 14.3 3.3e-05 23.7 9.9 2.4 1 1 1 2 2 1 1 FlxA-like protein GAS PF13851.1 gi|84489674|ref|YP_447906.1| - 4e-05 22.9 37.1 0.00099 18.3 11.4 2.4 1 1 1 2 2 2 2 Growth-arrest specific micro-tubule binding ADIP PF11559.3 gi|84489674|ref|YP_447906.1| - 5.2e-05 23.1 19.8 5.2e-05 23.1 13.7 2.6 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Myosin_tail_1 PF01576.14 gi|84489674|ref|YP_447906.1| - 0.00017 19.5 26.7 0.0003 18.6 18.5 1.4 1 0 0 1 1 1 1 Myosin tail Reo_sigmaC PF04582.7 gi|84489674|ref|YP_447906.1| - 0.00032 20.0 6.6 0.00045 19.5 4.6 1.4 1 0 0 1 1 1 1 Reovirus sigma C capsid protein YlqD PF11068.3 gi|84489674|ref|YP_447906.1| - 0.00034 20.6 26.5 0.0014 18.6 3.3 2.8 1 1 2 3 3 3 1 YlqD protein She9_MDM33 PF05546.6 gi|84489674|ref|YP_447906.1| - 0.0006 19.4 1.8 0.0006 19.4 1.2 3.0 1 1 1 3 3 3 1 She9 / Mdm33 family IncA PF04156.9 gi|84489674|ref|YP_447906.1| - 0.00083 19.0 28.4 0.0078 15.8 7.3 2.7 1 1 2 3 3 3 2 IncA protein DUF724 PF05266.9 gi|84489674|ref|YP_447906.1| - 0.0009 18.9 8.2 0.0009 18.9 5.7 2.5 1 1 1 2 2 2 1 Protein of unknown function (DUF724) FliD_C PF07195.7 gi|84489674|ref|YP_447906.1| - 0.00099 18.4 25.7 0.077 12.2 9.2 2.4 1 1 1 2 2 2 2 Flagellar hook-associated protein 2 C-terminus BicD PF09730.4 gi|84489674|ref|YP_447906.1| - 0.0012 17.3 20.9 0.0017 16.7 14.5 1.2 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Filament PF00038.16 gi|84489674|ref|YP_447906.1| - 0.0018 17.8 26.8 0.034 13.6 4.2 2.4 1 1 1 2 2 2 2 Intermediate filament protein DUF3450 PF11932.3 gi|84489674|ref|YP_447906.1| - 0.0023 17.2 10.6 0.0023 17.2 7.3 2.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) bZIP_1 PF00170.16 gi|84489674|ref|YP_447906.1| - 0.0023 17.8 28.7 0.056 13.4 3.0 4.9 1 1 4 5 5 5 3 bZIP transcription factor APG6 PF04111.7 gi|84489674|ref|YP_447906.1| - 0.0026 16.8 23.9 0.0026 16.8 16.5 2.5 1 1 2 3 3 3 1 Autophagy protein Apg6 CENP-F_leu_zip PF10473.4 gi|84489674|ref|YP_447906.1| - 0.0036 17.1 24.0 0.0036 17.1 16.6 2.7 1 1 2 3 3 3 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CCDC155 PF14662.1 gi|84489674|ref|YP_447906.1| - 0.0036 16.9 11.0 0.0036 16.9 7.7 2.2 1 1 1 2 2 2 2 Coiled-coil region of CCDC155 MbeD_MobD PF04899.7 gi|84489674|ref|YP_447906.1| - 0.005 16.7 6.5 0.62 9.9 0.1 3.2 2 1 1 3 3 2 2 MbeD/MobD like Spectrin PF00435.16 gi|84489674|ref|YP_447906.1| - 0.0063 16.7 23.3 0.22 11.8 3.3 3.3 1 1 2 3 3 3 2 Spectrin repeat BLOC1_2 PF10046.4 gi|84489674|ref|YP_447906.1| - 0.0094 16.0 29.6 0.1 12.7 7.1 3.5 1 1 3 4 4 4 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_DNA_bd PF12329.3 gi|84489674|ref|YP_447906.1| - 0.0097 15.6 4.7 0.0097 15.6 3.3 3.6 1 1 2 3 3 2 2 TATA element modulatory factor 1 DNA binding TPR_MLP1_2 PF07926.7 gi|84489674|ref|YP_447906.1| - 0.012 15.3 38.4 0.025 14.3 2.0 3.4 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Kinesin-relat_1 PF12711.2 gi|84489674|ref|YP_447906.1| - 0.014 15.8 6.3 0.014 15.8 4.3 3.7 1 1 3 4 4 4 0 Kinesin motor Golgin_A5 PF09787.4 gi|84489674|ref|YP_447906.1| - 0.016 13.7 19.1 0.021 13.3 13.2 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Atg14 PF10186.4 gi|84489674|ref|YP_447906.1| - 0.016 14.1 27.7 0.023 13.6 10.1 2.1 1 1 1 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 Tropomyosin PF00261.15 gi|84489674|ref|YP_447906.1| - 0.016 14.3 23.1 0.031 13.3 15.2 1.8 1 1 0 1 1 1 0 Tropomyosin WEMBL PF05701.6 gi|84489674|ref|YP_447906.1| - 0.018 13.5 18.3 0.031 12.7 12.7 1.4 1 0 0 1 1 1 0 Weak chloroplast movement under blue light XG_FTase PF03254.8 gi|84489674|ref|YP_447906.1| - 0.019 13.4 4.1 0.029 12.8 2.9 1.2 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase DUF904 PF06005.7 gi|84489674|ref|YP_447906.1| - 0.02 15.1 6.4 0.02 15.1 4.4 4.6 1 1 2 3 3 2 0 Protein of unknown function (DUF904) Surfac_D-trimer PF09006.6 gi|84489674|ref|YP_447906.1| - 0.021 14.5 0.4 1.1 9.0 0.1 2.8 1 1 1 2 2 2 0 Lung surfactant protein D coiled-coil trimerisation Phage_GP20 PF06810.6 gi|84489674|ref|YP_447906.1| - 0.026 13.9 36.6 0.74 9.2 4.5 3.3 1 1 2 3 3 3 0 Phage minor structural protein GP20 PilJ PF13675.1 gi|84489674|ref|YP_447906.1| - 0.036 14.3 6.9 0.29 11.4 0.6 2.8 1 1 2 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term CALCOCO1 PF07888.6 gi|84489674|ref|YP_447906.1| - 0.037 12.3 20.2 0.046 12.0 14.0 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like HOOK PF05622.7 gi|84489674|ref|YP_447906.1| - 0.038 11.8 31.0 0.019 12.7 7.2 2.1 1 1 1 2 2 2 0 HOOK protein Nup88 PF10168.4 gi|84489674|ref|YP_447906.1| - 0.05 11.4 20.2 0.064 11.1 14.0 1.1 1 0 0 1 1 1 0 Nuclear pore component ATG16 PF08614.6 gi|84489674|ref|YP_447906.1| - 0.064 13.0 36.5 0.72 9.6 13.6 3.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) CHASE3 PF05227.8 gi|84489674|ref|YP_447906.1| - 0.082 12.5 14.6 0.69 9.5 1.3 2.4 1 1 1 2 2 2 0 CHASE3 domain WXG100 PF06013.7 gi|84489674|ref|YP_447906.1| - 0.089 12.8 8.4 0.094 12.7 1.7 3.1 2 1 0 2 2 2 0 Proteins of 100 residues with WXG ERM PF00769.14 gi|84489674|ref|YP_447906.1| - 0.096 12.2 27.9 0.013 15.0 13.4 2.2 1 1 2 3 3 3 0 Ezrin/radixin/moesin family DUF2353 PF09789.4 gi|84489674|ref|YP_447906.1| - 0.11 11.7 25.7 0.35 10.0 17.1 1.9 1 1 1 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) Lebercilin PF15619.1 gi|84489674|ref|YP_447906.1| - 0.12 11.7 31.7 0.12 11.7 9.9 2.3 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Rab5-bind PF09311.6 gi|84489674|ref|YP_447906.1| - 0.13 12.1 23.7 0.065 13.1 4.1 3.0 1 1 1 2 2 2 0 Rabaptin-like protein DUF4140 PF13600.1 gi|84489674|ref|YP_447906.1| - 0.18 12.3 15.1 1.3 9.4 0.8 3.7 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Fmp27_WPPW PF10359.4 gi|84489674|ref|YP_447906.1| - 0.2 10.0 30.4 0.18 10.1 7.9 2.1 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain DUF972 PF06156.8 gi|84489674|ref|YP_447906.1| - 0.35 11.2 31.4 9.3 6.6 10.8 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF972) Mod_r PF07200.8 gi|84489674|ref|YP_447906.1| - 0.39 10.6 30.6 6.9 6.5 10.3 3.2 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Troponin PF00992.15 gi|84489674|ref|YP_447906.1| - 0.43 10.6 22.0 3.2 7.8 9.8 2.2 1 1 1 2 2 2 0 Troponin TSC22 PF01166.13 gi|84489674|ref|YP_447906.1| - 0.44 10.5 24.2 0.17 11.8 2.5 4.6 1 1 2 4 4 4 0 TSC-22/dip/bun family Ax_dynein_light PF10211.4 gi|84489674|ref|YP_447906.1| - 0.45 10.3 32.5 0.1 12.4 9.8 2.9 1 1 2 3 3 3 0 Axonemal dynein light chain Pox_A_type_inc PF04508.7 gi|84489674|ref|YP_447906.1| - 0.53 10.2 5.5 3.2 7.7 0.3 4.2 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat YvrJ PF12841.2 gi|84489674|ref|YP_447906.1| - 0.54 9.5 3.4 1.3 8.3 0.2 2.7 2 0 0 2 2 2 0 YvrJ protein family AAA_13 PF13166.1 gi|84489674|ref|YP_447906.1| - 0.54 8.6 35.9 0.36 9.2 5.3 2.0 1 1 1 2 2 2 0 AAA domain Fib_alpha PF08702.5 gi|84489674|ref|YP_447906.1| - 0.55 10.3 30.8 0.051 13.7 14.3 2.9 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family zf-C4H2 PF10146.4 gi|84489674|ref|YP_447906.1| - 0.7 9.8 30.1 0.48 10.4 10.2 2.6 1 1 1 2 2 2 0 Zinc finger-containing protein Sigma70_ner PF04546.8 gi|84489674|ref|YP_447906.1| - 0.73 9.4 17.0 0.3 10.6 8.9 2.1 1 1 1 2 2 2 0 Sigma-70, non-essential region Tropomyosin_1 PF12718.2 gi|84489674|ref|YP_447906.1| - 0.8 9.5 36.4 0.12 12.1 7.9 2.9 1 1 1 2 2 2 0 Tropomyosin like Tup_N PF08581.5 gi|84489674|ref|YP_447906.1| - 0.81 9.9 29.3 0.15 12.2 2.2 3.9 1 1 2 3 3 3 0 Tup N-terminal Prefoldin_2 PF01920.15 gi|84489674|ref|YP_447906.1| - 0.82 9.4 30.6 1.4 8.6 3.2 4.4 1 1 2 3 3 2 0 Prefoldin subunit BRE1 PF08647.6 gi|84489674|ref|YP_447906.1| - 0.83 9.6 31.4 0.17 11.8 4.4 2.9 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase Jnk-SapK_ap_N PF09744.4 gi|84489674|ref|YP_447906.1| - 0.89 9.5 28.4 0.7 9.8 3.4 2.6 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DivIC PF04977.10 gi|84489674|ref|YP_447906.1| - 1.1 8.8 35.9 0.037 13.5 3.0 4.7 2 1 3 5 5 4 0 Septum formation initiator Rootletin PF15035.1 gi|84489674|ref|YP_447906.1| - 1.3 8.9 29.6 4.7 7.1 10.7 2.9 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF3166 PF11365.3 gi|84489674|ref|YP_447906.1| - 2.8 8.4 16.4 25 5.4 2.5 4.4 1 1 3 4 4 4 0 Protein of unknown function (DUF3166) DivIVA PF05103.8 gi|84489674|ref|YP_447906.1| - 2.9 7.9 32.4 2.6 8.0 1.5 3.8 1 1 2 3 3 3 0 DivIVA protein Nup54 PF13874.1 gi|84489674|ref|YP_447906.1| - 4.3 6.9 22.3 11 5.6 7.0 3.0 1 1 0 2 2 2 0 Nucleoporin complex subunit 54 Striatin PF08232.7 gi|84489674|ref|YP_447906.1| - 4.6 7.5 24.6 0.35 11.1 7.7 2.6 1 1 2 3 3 3 0 Striatin family CENP-Q PF13094.1 gi|84489674|ref|YP_447906.1| - 4.7 7.2 29.8 0.51 10.3 10.3 2.3 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit COG5 PF10392.4 gi|84489674|ref|YP_447906.1| - 5.1 7.0 21.8 0.073 13.0 1.0 2.3 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Herpes_BLRF2 PF05812.7 gi|84489674|ref|YP_447906.1| - 5.3 6.8 26.1 0.99 9.2 0.5 4.9 2 1 2 4 4 4 0 Herpesvirus BLRF2 protein DUF3573 PF12097.3 gi|84489674|ref|YP_447906.1| - 6.2 5.3 25.2 0.039 12.5 4.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3573) Dor1 PF04124.7 gi|84489674|ref|YP_447906.1| - 7.3 4.9 24.4 1 7.7 7.7 2.2 1 1 1 2 2 2 0 Dor1-like family DUF1664 PF07889.7 gi|84489674|ref|YP_447906.1| - 9.1 6.0 22.2 0.81 9.4 2.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) HAUS-augmin3 PF14932.1 gi|84489674|ref|YP_447906.1| - 9.9 5.2 28.5 12 4.9 14.4 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 V-ATPase_C PF03223.10 gi|84489676|ref|YP_447908.1| - 0.099 11.5 0.2 0.094 11.6 0.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit C DUF3609 PF12259.3 gi|84489676|ref|YP_447908.1| - 0.12 11.0 1.9 0.13 10.9 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3609) NUDIX PF00293.23 gi|84489677|ref|YP_447909.1| - 1.5e-19 69.9 0.0 2.3e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.6 gi|84489677|ref|YP_447909.1| - 2.1e-10 39.9 0.5 3.4e-10 39.2 0.3 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain DZR PF12773.2 gi|84489677|ref|YP_447909.1| - 0.0007 19.3 0.2 0.0012 18.6 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|84489677|ref|YP_447909.1| - 0.0012 18.4 0.2 0.0024 17.4 0.1 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.14 gi|84489677|ref|YP_447909.1| - 0.0036 16.9 0.0 0.0067 16.1 0.0 1.5 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family zf-ribbon_3 PF13248.1 gi|84489677|ref|YP_447909.1| - 0.0041 16.2 0.3 2.3 7.5 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|84489677|ref|YP_447909.1| - 0.0041 16.3 0.5 0.01 15.1 0.4 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding DUF1451 PF07295.6 gi|84489677|ref|YP_447909.1| - 0.0067 16.2 0.5 0.013 15.2 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1451) DNA_RNApol_7kD PF03604.8 gi|84489677|ref|YP_447909.1| - 0.019 14.4 1.0 0.038 13.4 0.7 1.4 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Baculo_ME53 PF06061.6 gi|84489677|ref|YP_447909.1| - 0.038 12.9 0.2 0.051 12.5 0.1 1.2 1 0 0 1 1 1 0 Baculoviridae ME53 A2L_zn_ribbon PF08792.5 gi|84489677|ref|YP_447909.1| - 0.049 13.0 1.7 0.14 11.6 1.2 1.8 1 0 0 1 1 1 0 A2L zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|84489677|ref|YP_447909.1| - 0.089 12.6 1.1 13 5.6 0.2 2.4 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Nudix_N_2 PF14803.1 gi|84489677|ref|YP_447909.1| - 0.39 10.4 4.1 4.6 7.0 2.8 2.3 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_2 PF13240.1 gi|84489677|ref|YP_447909.1| - 1.8 8.1 7.0 5.6 6.5 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF4013 PF13197.1 gi|84489678|ref|YP_447910.1| - 1.6e-25 89.3 37.2 1.6e-25 89.3 25.8 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF4013) DUF2627 PF11118.3 gi|84489678|ref|YP_447910.1| - 0.024 14.7 0.4 0.024 14.7 0.2 3.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2627) KOW PF00467.24 gi|84489679|ref|YP_447911.1| - 0.00034 20.2 6.3 0.002 17.7 4.3 2.1 1 1 0 1 1 1 1 KOW motif UPF0728 PF15092.1 gi|84489679|ref|YP_447911.1| - 0.05 13.4 0.2 0.056 13.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 KH_1 PF00013.24 gi|84489679|ref|YP_447911.1| - 0.98 9.1 4.0 12 5.5 2.8 2.2 1 1 0 1 1 1 0 KH domain Cytidylate_kin2 PF13189.1 gi|84489680|ref|YP_447912.1| - 1.8e-18 67.0 3.3 1.1e-17 64.5 2.3 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|84489680|ref|YP_447912.1| - 1.1e-14 54.8 0.1 2.7e-14 53.5 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|84489680|ref|YP_447912.1| - 1.5e-10 41.9 0.1 3.7e-10 40.6 0.0 1.6 1 1 1 2 2 2 1 AAA domain Cytidylate_kin PF02224.13 gi|84489680|ref|YP_447912.1| - 1.1e-07 31.3 0.4 1.4e-07 31.0 0.3 1.3 1 0 0 1 1 1 1 Cytidylate kinase AAA_33 PF13671.1 gi|84489680|ref|YP_447912.1| - 0.00057 19.7 0.2 0.0021 17.9 0.2 1.8 1 1 0 1 1 1 1 AAA domain ADK PF00406.17 gi|84489680|ref|YP_447912.1| - 0.00057 19.7 0.3 0.0038 17.1 0.0 2.1 1 1 1 2 2 2 1 Adenylate kinase SKI PF01202.17 gi|84489680|ref|YP_447912.1| - 0.00083 19.2 0.8 0.0022 17.9 0.5 1.7 1 1 0 1 1 1 1 Shikimate kinase CoaE PF01121.15 gi|84489680|ref|YP_447912.1| - 0.0076 15.6 1.5 0.098 12.0 0.0 2.1 1 1 1 2 2 2 1 Dephospho-CoA kinase DUF1963 PF09234.5 gi|84489680|ref|YP_447912.1| - 0.03 14.5 0.0 0.045 13.9 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1963) PRK PF00485.13 gi|84489680|ref|YP_447912.1| - 0.058 12.9 0.4 0.11 12.0 0.1 1.7 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family SRP54 PF00448.17 gi|84489680|ref|YP_447912.1| - 0.07 12.5 0.4 0.19 11.1 0.0 1.8 1 1 0 2 2 2 0 SRP54-type protein, GTPase domain Ribosomal_L34e PF01199.13 gi|84489681|ref|YP_447913.1| - 5.5e-28 97.0 7.6 5.9e-28 96.9 5.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e zf-ribbon_3 PF13248.1 gi|84489681|ref|YP_447913.1| - 0.0052 15.9 1.1 2.3 7.5 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|84489681|ref|YP_447913.1| - 0.022 14.0 0.3 2.4 7.5 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.1 gi|84489681|ref|YP_447913.1| - 0.038 13.4 1.8 3.9 7.0 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84489681|ref|YP_447913.1| - 0.039 13.6 1.1 1.1 8.9 0.1 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DZR PF12773.2 gi|84489681|ref|YP_447913.1| - 0.048 13.4 2.8 0.13 12.1 1.9 1.7 1 1 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.17 gi|84489681|ref|YP_447913.1| - 0.052 13.2 0.6 0.55 10.0 0.4 2.0 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Nudix_N_2 PF14803.1 gi|84489681|ref|YP_447913.1| - 0.054 13.1 0.4 4.9 6.9 0.0 2.4 2 0 0 2 2 2 0 Nudix N-terminal GFA PF04828.9 gi|84489681|ref|YP_447913.1| - 0.085 12.8 1.6 0.67 9.9 0.1 2.0 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Prim_Zn_Ribbon PF08273.7 gi|84489681|ref|YP_447913.1| - 0.09 12.8 0.1 4 7.5 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Ribosomal_L37ae PF01780.14 gi|84489681|ref|YP_447913.1| - 0.13 12.1 1.2 1.6 8.6 0.1 2.2 2 0 0 2 2 2 0 Ribosomal L37ae protein family zf-UBP PF02148.14 gi|84489681|ref|YP_447913.1| - 0.18 11.9 1.0 5.4 7.2 0.7 2.2 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein FYVE PF01363.16 gi|84489681|ref|YP_447913.1| - 0.28 11.1 3.2 1.2 9.0 2.2 1.8 1 1 0 1 1 1 0 FYVE zinc finger YhfH PF14149.1 gi|84489681|ref|YP_447913.1| - 0.54 10.0 4.6 1.1 9.1 0.2 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-H2C2_2 PF13465.1 gi|84489681|ref|YP_447913.1| - 6.1 7.3 7.9 5.3 7.5 2.0 2.3 2 0 0 2 2 2 0 Zinc-finger double domain DUF106 PF01956.11 gi|84489682|ref|YP_447914.1| - 1.3e-29 102.8 7.4 1.5e-29 102.6 5.1 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF106 60KD_IMP PF02096.15 gi|84489682|ref|YP_447914.1| - 0.0025 17.5 12.6 0.0047 16.6 8.7 1.5 1 1 1 2 2 2 1 60Kd inner membrane protein OmpH PF03938.9 gi|84489682|ref|YP_447914.1| - 0.023 14.6 1.5 0.031 14.2 1.1 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) G0-G1_switch_2 PF15103.1 gi|84489682|ref|YP_447914.1| - 0.096 12.9 0.7 0.34 11.1 0.5 1.8 1 1 1 2 2 2 0 G0/G1 switch protein 2 DUF1090 PF06476.7 gi|84489682|ref|YP_447914.1| - 0.1 12.2 2.3 0.14 11.8 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) DUF964 PF06133.6 gi|84489682|ref|YP_447914.1| - 0.16 11.9 4.7 0.23 11.5 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF964) DPM3 PF08285.6 gi|84489682|ref|YP_447914.1| - 2.6 7.9 7.2 0.99 9.3 0.0 2.6 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF485 PF04341.7 gi|84489682|ref|YP_447914.1| - 5.6 6.7 8.3 4.9 6.9 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function, DUF485 DUF4363 PF14276.1 gi|84489682|ref|YP_447914.1| - 5.9 6.6 7.0 0.97 9.1 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) AAA_18 PF13238.1 gi|84489683|ref|YP_447915.1| - 1.8e-21 76.7 0.0 2.2e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|84489683|ref|YP_447915.1| - 1.2e-05 26.1 0.0 1.5e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|84489683|ref|YP_447915.1| - 0.00045 20.2 0.0 0.005 16.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|84489683|ref|YP_447915.1| - 0.0027 16.8 0.1 0.0063 15.6 0.0 1.5 1 1 0 1 1 1 1 Zeta toxin AAA_33 PF13671.1 gi|84489683|ref|YP_447915.1| - 0.0031 17.3 0.0 0.0046 16.8 0.0 1.5 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.17 gi|84489683|ref|YP_447915.1| - 0.006 15.4 0.0 0.009 14.8 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_19 PF13245.1 gi|84489683|ref|YP_447915.1| - 0.014 15.1 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA PF00004.24 gi|84489683|ref|YP_447915.1| - 0.02 15.0 0.0 0.042 14.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.17 gi|84489683|ref|YP_447915.1| - 0.031 13.7 0.2 0.099 12.0 0.1 1.8 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain Arch_ATPase PF01637.13 gi|84489683|ref|YP_447915.1| - 0.032 13.9 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase Pyr_redox PF00070.22 gi|84489683|ref|YP_447915.1| - 0.036 14.4 0.2 0.67 10.3 0.0 2.5 2 2 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase KTI12 PF08433.5 gi|84489683|ref|YP_447915.1| - 0.046 12.9 0.0 0.052 12.7 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NTPase_1 PF03266.10 gi|84489683|ref|YP_447915.1| - 0.12 12.0 0.1 0.27 10.9 0.0 1.6 1 1 0 1 1 1 0 NTPase SecY PF00344.15 gi|84489684|ref|YP_447916.1| - 6.1e-94 314.7 26.1 7.8e-94 314.4 18.1 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|84489684|ref|YP_447916.1| - 7.4e-12 44.5 1.3 3e-11 42.6 0.9 2.2 1 0 0 1 1 1 1 Plug domain of Sec61p RseC_MucC PF04246.7 gi|84489684|ref|YP_447916.1| - 0.12 11.8 0.2 0.12 11.8 0.2 2.9 3 0 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Ribosomal_L18e PF00828.14 gi|84489685|ref|YP_447917.1| - 2.4e-33 115.2 0.4 3.6e-33 114.6 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Ribosomal_L30 PF00327.15 gi|84489686|ref|YP_447918.1| - 9e-19 66.8 0.1 1.5e-18 66.1 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5 PF00333.15 gi|84489687|ref|YP_447919.1| - 1.6e-27 95.0 3.0 2.6e-27 94.3 1.5 1.8 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|84489687|ref|YP_447919.1| - 1.3e-20 72.4 0.2 2.2e-20 71.7 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L18p PF00861.17 gi|84489688|ref|YP_447920.1| - 5.2e-31 107.3 0.1 6.6e-31 106.9 0.1 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_L18_c PF14204.1 gi|84489688|ref|YP_447920.1| - 7.9e-08 32.7 1.5 9.7e-08 32.4 0.1 1.8 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region Ribosomal_L19e PF01280.15 gi|84489689|ref|YP_447921.1| - 9.1e-59 197.4 10.4 1e-58 197.3 7.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e TcdB_toxin_midN PF12256.3 gi|84489689|ref|YP_447921.1| - 0.04 13.3 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/N-terminal region DUF3391 PF11871.3 gi|84489689|ref|YP_447921.1| - 0.051 13.7 0.8 0.069 13.3 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) Cnd1_N PF12922.2 gi|84489689|ref|YP_447921.1| - 0.2 11.2 1.7 12 5.4 0.0 2.1 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1, N-term Ribosomal_L32e PF01655.13 gi|84489690|ref|YP_447922.1| - 3.7e-38 129.9 2.1 4.1e-38 129.7 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L6 PF00347.18 gi|84489691|ref|YP_447923.1| - 3.1e-27 94.8 13.5 5.4e-18 65.2 3.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Tub PF01167.13 gi|84489691|ref|YP_447923.1| - 0.0077 15.2 0.4 0.012 14.6 0.2 1.3 1 1 0 1 1 1 1 Tub family HSP20 PF00011.16 gi|84489691|ref|YP_447923.1| - 0.026 14.3 5.3 2 8.3 0.1 3.2 3 1 0 3 3 3 0 Hsp20/alpha crystallin family DNA_pol3_beta PF00712.14 gi|84489691|ref|YP_447923.1| - 0.078 12.8 1.6 45 3.9 0.1 3.0 2 1 1 3 3 3 0 DNA polymerase III beta subunit, N-terminal domain TAT_ubiq PF07706.7 gi|84489691|ref|YP_447923.1| - 0.095 12.6 0.3 11 6.0 0.0 2.7 2 0 0 2 2 2 0 Aminotransferase ubiquitination site bPH_3 PF14470.1 gi|84489691|ref|YP_447923.1| - 0.19 11.9 4.0 3.9 7.8 0.4 3.0 2 1 0 2 2 2 0 Bacterial PH domain BON PF04972.12 gi|84489691|ref|YP_447923.1| - 0.62 9.8 5.8 2.7 7.8 0.1 3.3 4 0 0 4 4 4 0 BON domain Cadherin-like PF12733.2 gi|84489691|ref|YP_447923.1| - 2.8 8.3 10.4 1.9 8.8 2.8 2.5 1 1 1 2 2 2 0 Cadherin-like beta sandwich domain Ribosomal_S8 PF00410.14 gi|84489692|ref|YP_447924.1| - 1.1e-24 86.6 0.0 1.5e-24 86.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.16 gi|84489693|ref|YP_447925.1| - 6.4e-16 57.4 5.5 6.7e-16 57.4 3.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-FPG_IleRS PF06827.9 gi|84489693|ref|YP_447925.1| - 0.05 13.2 3.7 0.08 12.5 2.6 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS DUF2039 PF10217.4 gi|84489693|ref|YP_447925.1| - 0.058 13.4 2.8 0.43 10.6 0.1 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) DZR PF12773.2 gi|84489693|ref|YP_447925.1| - 0.1 12.4 1.4 0.2 11.4 1.0 1.5 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS91 PF14319.1 gi|84489693|ref|YP_447925.1| - 0.15 11.5 0.8 0.15 11.5 0.6 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-dskA_traR PF01258.12 gi|84489693|ref|YP_447925.1| - 0.28 10.9 2.4 4.2 7.2 0.1 2.1 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DM PF00751.13 gi|84489693|ref|YP_447925.1| - 0.95 9.0 4.6 2.3 7.7 3.2 1.7 1 1 0 1 1 1 0 DM DNA binding domain ZZ PF00569.12 gi|84489693|ref|YP_447925.1| - 1 8.9 4.3 9.3 5.8 3.0 2.0 1 1 0 1 1 1 0 Zinc finger, ZZ type Ribosomal_L5_C PF00673.16 gi|84489694|ref|YP_447926.1| - 1.1e-25 89.1 0.0 2.2e-25 88.2 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|84489694|ref|YP_447926.1| - 8.6e-16 57.4 0.2 2.8e-15 55.8 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L5 Ribosomal_S4e PF00900.15 gi|84489695|ref|YP_447927.1| - 3.7e-28 97.0 1.2 7.6e-28 95.9 0.8 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|84489695|ref|YP_447927.1| - 5e-19 67.8 5.2 5.7e-19 67.6 2.9 1.6 2 0 0 2 2 2 1 RS4NT (NUC023) domain S4 PF01479.20 gi|84489695|ref|YP_447927.1| - 0.014 14.7 0.0 0.024 14.0 0.0 1.4 1 0 0 1 1 1 0 S4 domain tRNA_SAD PF07973.9 gi|84489695|ref|YP_447927.1| - 0.083 12.7 0.3 0.23 11.3 0.2 1.7 1 0 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain KOW PF00467.24 gi|84489696|ref|YP_447928.1| - 1.8e-07 30.5 2.1 2.7e-07 30.0 1.4 1.3 1 0 0 1 1 1 1 KOW motif SURF1 PF02104.10 gi|84489696|ref|YP_447928.1| - 0.091 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 SURF1 family Ribosomal_L14 PF00238.14 gi|84489697|ref|YP_447929.1| - 7.4e-35 119.3 0.5 8.4e-35 119.1 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e FeoA PF04023.9 gi|84489697|ref|YP_447929.1| - 0.31 11.0 2.0 4.1 7.4 0.9 2.4 1 1 1 2 2 2 0 FeoA domain Ribosomal_S17 PF00366.15 gi|84489698|ref|YP_447930.1| - 3.5e-24 84.6 1.8 3.5e-24 84.6 1.2 1.4 2 0 0 2 2 2 1 Ribosomal protein S17 Rad9_Rad53_bind PF08605.5 gi|84489698|ref|YP_447930.1| - 0.049 13.4 0.1 0.062 13.0 0.1 1.2 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding UPF0086 PF01868.11 gi|84489699|ref|YP_447931.1| - 3.6e-34 116.2 1.2 4e-34 116.1 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 SUI1 PF01253.17 gi|84489700|ref|YP_447932.1| - 3.6e-22 77.9 1.8 4.5e-22 77.6 1.2 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.9 gi|84489700|ref|YP_447932.1| - 0.00089 19.4 0.6 0.0019 18.3 0.4 1.5 1 1 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) Ribosomal_L29 PF00831.18 gi|84489701|ref|YP_447933.1| - 1.3e-18 66.3 0.0 1.5e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein KH_2 PF07650.12 gi|84489702|ref|YP_447934.1| - 2.3e-15 55.9 1.3 3.4e-15 55.3 0.1 1.9 2 0 0 2 2 2 1 KH domain Ribosomal_S3_C PF00189.15 gi|84489702|ref|YP_447934.1| - 2.9e-14 53.0 1.6 5.3e-14 52.1 1.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_1 PF00013.24 gi|84489702|ref|YP_447934.1| - 0.0023 17.5 2.3 0.0063 16.1 0.0 2.8 3 0 0 3 3 3 1 KH domain KH_4 PF13083.1 gi|84489702|ref|YP_447934.1| - 0.004 16.7 2.2 0.0043 16.6 0.0 2.2 2 0 0 2 2 2 1 KH domain DisA-linker PF10635.4 gi|84489702|ref|YP_447934.1| - 0.024 14.1 6.1 0.06 12.8 0.0 2.2 2 0 0 2 2 2 0 DisA bacterial checkpoint controller linker region KH_3 PF13014.1 gi|84489702|ref|YP_447934.1| - 0.034 13.8 4.0 0.034 13.8 0.2 2.7 3 0 0 3 3 3 0 KH domain Ribosomal_L22 PF00237.14 gi|84489703|ref|YP_447935.1| - 2e-35 120.8 0.0 2.5e-35 120.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S19 PF00203.16 gi|84489704|ref|YP_447936.1| - 6.1e-26 89.8 0.1 8e-26 89.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 DUF4224 PF13986.1 gi|84489704|ref|YP_447936.1| - 0.063 12.8 1.3 0.48 10.0 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4224) Ribosomal_L2_C PF03947.13 gi|84489705|ref|YP_447937.1| - 4.3e-45 152.7 0.9 7.2e-45 151.9 0.6 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|84489705|ref|YP_447937.1| - 7e-21 73.9 0.0 1.7e-20 72.7 0.0 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.15 gi|84489706|ref|YP_447938.1| - 5.8e-16 58.2 0.9 8.4e-16 57.6 0.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L23 RNA_pol_Rpc82 PF05645.8 gi|84489706|ref|YP_447938.1| - 0.09 12.2 0.0 0.091 12.2 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Ribosomal_L4 PF00573.17 gi|84489707|ref|YP_447939.1| - 1.7e-44 151.5 0.2 2e-44 151.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.17 gi|84489708|ref|YP_447940.1| - 3.1e-81 272.6 0.1 3.6e-81 272.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Methyltrn_RNA_3 PF02598.12 gi|84489709|ref|YP_447941.1| - 1.3e-60 205.2 0.0 1.6e-60 204.9 0.0 1.1 1 0 0 1 1 1 1 Putative RNA methyltransferase SPOUT_MTase_2 PF14419.1 gi|84489709|ref|YP_447941.1| - 0.0029 16.8 0.0 0.005 16.0 0.0 1.4 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP SIR2_2 PF13289.1 gi|84489709|ref|YP_447941.1| - 0.066 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 SIR2-like domain NadA PF02445.11 gi|84489709|ref|YP_447941.1| - 0.083 11.6 0.0 0.16 10.7 0.0 1.4 1 0 0 1 1 1 0 Quinolinate synthetase A protein PBP_sp32 PF07222.7 gi|84489710|ref|YP_447942.1| - 0.068 12.3 4.5 0.21 10.7 3.1 1.8 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF3426 PF11906.3 gi|84489710|ref|YP_447942.1| - 0.99 9.0 1.1 16 5.1 0.0 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3426) Beta_helix PF13229.1 gi|84489712|ref|YP_447944.1| - 4e-05 23.4 44.4 4e-05 23.4 30.8 11.5 2 1 7 10 10 10 4 Right handed beta helix region CPSase_L_D2 PF02786.12 gi|84489713|ref|YP_447945.1| - 4.4e-85 284.2 0.5 6.6e-85 283.6 0.4 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_C PF02785.14 gi|84489713|ref|YP_447945.1| - 2.4e-39 133.6 0.0 5.2e-39 132.5 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain CPSase_L_chain PF00289.17 gi|84489713|ref|YP_447945.1| - 8.7e-38 128.8 0.0 2.4e-37 127.3 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain ATP-grasp_4 PF13535.1 gi|84489713|ref|YP_447945.1| - 1.1e-17 64.3 0.0 2.2e-17 63.3 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|84489713|ref|YP_447945.1| - 8.7e-16 57.5 0.0 1.2e-14 53.7 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|84489713|ref|YP_447945.1| - 2.6e-12 46.5 0.1 7.3e-12 45.1 0.1 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|84489713|ref|YP_447945.1| - 4e-11 42.7 0.3 1.6e-10 40.7 0.1 2.1 2 1 0 2 2 2 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.9 gi|84489713|ref|YP_447945.1| - 1.7e-09 37.7 0.1 3.2e-09 36.8 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|84489713|ref|YP_447945.1| - 1.1e-07 31.4 0.1 2.1e-07 30.4 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|84489713|ref|YP_447945.1| - 2.2e-06 27.3 1.2 5e-06 26.2 0.1 2.1 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.1 gi|84489713|ref|YP_447945.1| - 0.0075 15.5 0.0 0.016 14.4 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain DUF2529 PF10740.4 gi|84489713|ref|YP_447945.1| - 0.034 13.5 0.1 0.25 10.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2529) BPL_LplA_LipB PF03099.14 gi|84489714|ref|YP_447946.1| - 2.2e-12 47.0 0.2 3.5e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.12 gi|84489714|ref|YP_447946.1| - 8e-09 35.0 0.6 1.8e-08 33.9 0.4 1.6 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain CsgE PF10627.4 gi|84489714|ref|YP_447946.1| - 0.04 13.7 0.5 0.069 12.9 0.4 1.3 1 0 0 1 1 1 0 Curli assembly protein CsgE ocr PF08684.5 gi|84489714|ref|YP_447946.1| - 0.047 13.7 0.8 0.15 12.0 0.2 2.0 1 1 1 2 2 2 0 DNA mimic ocr Cys_Met_Meta_PP PF01053.15 gi|84489715|ref|YP_447947.1| - 2.5e-08 32.6 0.2 4.7e-08 31.7 0.1 1.3 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|84489715|ref|YP_447947.1| - 4.8e-06 25.5 0.1 1.5e-05 23.9 0.1 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|84489715|ref|YP_447947.1| - 1.1e-05 24.5 0.0 2.6e-05 23.3 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.8 gi|84489715|ref|YP_447947.1| - 3.4e-05 22.7 0.1 4.9e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Beta_elim_lyase PF01212.16 gi|84489715|ref|YP_447947.1| - 0.0019 17.4 0.0 0.0028 16.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase SpoU_methylase PF00588.14 gi|84489715|ref|YP_447947.1| - 0.012 15.4 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 SpoU rRNA Methylase family DUF2124 PF09897.4 gi|84489715|ref|YP_447947.1| - 0.057 13.1 0.1 1.9 8.1 0.0 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2124) APG5 PF04106.7 gi|84489715|ref|YP_447947.1| - 0.094 12.1 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Autophagy protein Apg5 Polysacc_synt PF01943.12 gi|84489717|ref|YP_447949.1| - 5.1e-35 121.0 32.6 5.1e-35 121.0 22.6 2.7 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|84489717|ref|YP_447949.1| - 1.9e-28 99.0 48.3 2e-26 92.5 17.0 4.3 4 2 0 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|84489717|ref|YP_447949.1| - 4e-22 78.2 42.6 3.5e-20 71.8 24.2 2.2 1 1 1 2 2 2 2 MviN-like protein MatE PF01554.13 gi|84489717|ref|YP_447949.1| - 2e-16 60.0 37.2 1.8e-12 47.1 10.4 3.4 3 1 0 3 3 3 2 MatE Polysacc_synt_3 PF13440.1 gi|84489717|ref|YP_447949.1| - 1.1e-09 38.1 50.5 1.5e-09 37.7 16.1 2.8 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Scs3p PF10261.4 gi|84489717|ref|YP_447949.1| - 7.3 5.5 7.7 12 4.8 3.1 2.8 2 1 0 2 2 2 0 Inositol phospholipid synthesis and fat-storage-inducing TM ATP-grasp_5 PF13549.1 gi|84489718|ref|YP_447950.1| - 3.5e-71 238.9 0.1 5.3e-71 238.3 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|84489718|ref|YP_447950.1| - 5.5e-56 187.9 0.3 2.8e-55 185.7 0.2 2.1 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|84489718|ref|YP_447950.1| - 2.8e-22 79.0 0.4 9.4e-21 74.1 0.0 3.2 2 1 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 gi|84489718|ref|YP_447950.1| - 4e-16 59.3 0.3 2.2e-15 56.9 0.2 2.4 1 0 0 1 1 1 1 CoA binding domain Aldedh PF00171.17 gi|84489718|ref|YP_447950.1| - 0.0014 17.0 0.1 0.0022 16.3 0.0 1.3 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CPSase_L_D2 PF02786.12 gi|84489718|ref|YP_447950.1| - 0.024 13.9 1.7 0.041 13.1 0.2 2.0 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 gi|84489718|ref|YP_447950.1| - 0.045 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain Tex_N PF09371.5 gi|84489719|ref|YP_447951.1| - 2.8e-67 225.8 9.0 2.8e-67 225.8 6.2 1.7 2 0 0 2 2 2 1 Tex-like protein N-terminal domain HHH_3 PF12836.2 gi|84489719|ref|YP_447951.1| - 1.4e-26 92.2 0.0 4.8e-26 90.4 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif S1 PF00575.18 gi|84489719|ref|YP_447951.1| - 1.8e-18 66.3 4.0 5.4e-18 64.8 2.8 1.9 1 0 0 1 1 1 1 S1 RNA binding domain YqgF PF14639.1 gi|84489719|ref|YP_447951.1| - 2.7e-08 33.5 1.0 1.4e-07 31.2 0.1 2.5 2 0 0 2 2 2 1 Holliday-junction resolvase-like of SPT6 HHH_7 PF14635.1 gi|84489719|ref|YP_447951.1| - 1.9e-06 27.9 0.5 1.4e-05 25.1 0.0 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.18 gi|84489719|ref|YP_447951.1| - 8.9e-05 21.9 0.0 0.024 14.3 0.0 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif DUF504 PF04457.7 gi|84489719|ref|YP_447951.1| - 0.043 13.9 0.1 0.16 12.1 0.1 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF504) HHH_6 PF14579.1 gi|84489719|ref|YP_447951.1| - 0.086 12.8 0.1 1.4 8.9 0.0 3.0 3 0 0 3 3 3 0 Helix-hairpin-helix motif PGA_cap PF09587.5 gi|84489720|ref|YP_447952.1| - 4.8e-69 232.4 0.7 6e-69 232.1 0.5 1.1 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Metallophos_2 PF12850.2 gi|84489720|ref|YP_447952.1| - 0.011 15.6 0.7 0.015 15.1 0.5 1.5 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Hydrolase_6 PF13344.1 gi|84489720|ref|YP_447952.1| - 0.067 13.0 0.3 0.62 9.9 0.0 2.6 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase DUF4399 PF14347.1 gi|84489721|ref|YP_447953.1| - 1.8e-05 24.6 0.6 0.12 12.3 0.1 3.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4399) Chlam_PMP PF02415.12 gi|84489721|ref|YP_447953.1| - 0.014 15.6 2.8 0.014 15.6 1.9 8.1 7 1 0 7 7 7 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF3920 PF13058.1 gi|84489721|ref|YP_447953.1| - 0.031 14.0 0.0 15 5.3 0.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3920) BBS2_Mid PF14783.1 gi|84489721|ref|YP_447953.1| - 0.13 11.9 10.4 4.4 7.1 0.1 4.4 5 0 0 5 5 5 0 Ciliary BBSome complex subunit 2, middle region Cytochrom_B562 PF07361.6 gi|84489721|ref|YP_447953.1| - 0.44 10.9 5.8 0.94 9.9 4.0 1.5 1 0 0 1 1 1 0 Cytochrome b562 tRNA-synt_1c PF00749.16 gi|84489722|ref|YP_447954.1| - 2.9e-80 269.2 0.3 2.9e-80 269.2 0.2 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|84489722|ref|YP_447954.1| - 1.6e-31 109.3 1.2 2.3e-31 108.8 0.1 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1d PF00750.14 gi|84489722|ref|YP_447954.1| - 0.0015 17.3 0.0 0.003 16.4 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (R) DUF3886 PF13025.1 gi|84489722|ref|YP_447954.1| - 0.039 13.9 1.6 0.086 12.8 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) Aminotran_1_2 PF00155.16 gi|84489723|ref|YP_447955.1| - 6e-31 107.6 0.0 1.5e-30 106.4 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|84489723|ref|YP_447955.1| - 0.073 12.2 0.0 0.36 9.9 0.0 1.9 2 0 0 2 2 2 0 Beta-eliminating lyase MFS_1 PF07690.11 gi|84489724|ref|YP_447956.1| - 3.9e-47 160.6 49.9 7.7e-32 110.3 18.7 2.7 2 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|84489724|ref|YP_447956.1| - 4.2e-11 42.0 36.0 2.8e-10 39.3 10.6 2.9 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.2 gi|84489724|ref|YP_447956.1| - 0.00019 21.1 0.2 0.00019 21.1 0.1 4.1 4 1 1 5 5 5 2 MFS_1 like family MFS_3 PF05977.8 gi|84489724|ref|YP_447956.1| - 0.00035 18.8 15.0 0.0092 14.1 2.2 2.4 2 1 0 2 2 2 2 Transmembrane secretion effector PMP22_Claudin PF00822.15 gi|84489724|ref|YP_447956.1| - 0.027 14.1 0.3 0.027 14.1 0.2 4.4 4 1 0 4 4 4 0 PMP-22/EMP/MP20/Claudin family HTH_45 PF14947.1 gi|84489725|ref|YP_447957.1| - 0.017 14.9 0.5 0.017 14.9 0.3 2.2 2 1 1 3 3 3 0 Winged helix-turn-helix HTH_Crp_2 PF13545.1 gi|84489725|ref|YP_447957.1| - 0.022 14.5 0.0 0.046 13.5 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Peptidase_U35_2 PF14550.1 gi|84489725|ref|YP_447957.1| - 0.15 11.7 0.9 0.28 10.8 0.3 1.7 2 0 0 2 2 2 0 Putative phage protease XkdF DUF3566 PF12089.3 gi|84489726|ref|YP_447958.1| - 0.26 11.3 5.0 0.33 10.9 3.5 1.3 1 1 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) AAA_11 PF13086.1 gi|84489728|ref|YP_447960.1| - 6.8e-17 61.8 19.1 1.7e-11 44.1 0.1 3.6 2 2 1 3 3 3 2 AAA domain AAA_12 PF13087.1 gi|84489728|ref|YP_447960.1| - 2.7e-15 56.2 0.1 2.7e-15 56.2 0.1 3.5 3 1 0 3 3 3 1 AAA domain AAA_19 PF13245.1 gi|84489728|ref|YP_447960.1| - 6.1e-13 48.3 0.0 1.4e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_30 PF13604.1 gi|84489728|ref|YP_447960.1| - 1e-05 25.2 0.0 0.0018 17.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.13 gi|84489728|ref|YP_447960.1| - 0.0007 19.1 1.6 0.64 9.4 0.0 3.1 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase DUF3320 PF11784.3 gi|84489728|ref|YP_447960.1| - 0.00083 18.8 0.0 0.002 17.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3320) DUF559 PF04480.7 gi|84489728|ref|YP_447960.1| - 0.002 17.7 0.4 0.039 13.6 0.0 2.9 3 0 0 3 3 3 1 Protein of unknown function (DUF559) Helicase_RecD PF05127.9 gi|84489728|ref|YP_447960.1| - 0.0032 17.1 0.0 0.19 11.3 0.0 2.6 2 0 0 2 2 2 1 Helicase AAA_22 PF13401.1 gi|84489728|ref|YP_447960.1| - 0.018 15.2 0.3 0.17 12.0 0.0 2.7 2 1 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|84489728|ref|YP_447960.1| - 0.034 13.2 0.0 0.079 12.1 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SE PF00437.15 gi|84489728|ref|YP_447960.1| - 0.056 12.3 0.0 0.18 10.6 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.13 gi|84489728|ref|YP_447960.1| - 0.07 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_17 PF13207.1 gi|84489728|ref|YP_447960.1| - 0.87 10.4 0.0 0.87 10.4 0.0 5.4 5 1 0 5 5 5 0 AAA domain DUF4011 PF13195.1 gi|84489729|ref|YP_447961.1| - 1.7e-51 174.7 4.9 2.2e-51 174.3 3.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4011) Flavin_Reduct PF01613.13 gi|84489730|ref|YP_447962.1| - 1.9e-23 83.0 0.0 2.4e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain FUSC_2 PF13515.1 gi|84489731|ref|YP_447963.1| - 3.9e-07 30.0 13.2 3.9e-07 30.0 9.1 3.1 2 1 1 3 3 3 1 Fusaric acid resistance protein-like ALMT PF11744.3 gi|84489731|ref|YP_447963.1| - 0.09 11.4 19.2 0.0093 14.6 7.2 2.7 1 1 1 2 2 2 0 Aluminium activated malate transporter FUSC PF04632.7 gi|84489731|ref|YP_447963.1| - 4.7 5.5 0.0 4.7 5.5 0.0 3.2 3 0 0 3 3 3 0 Fusaric acid resistance protein family DUF2085 PF09858.4 gi|84489733|ref|YP_447965.1| - 7.7e-36 122.0 2.4 9.1e-36 121.8 1.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2085) DUF4199 PF13858.1 gi|84489733|ref|YP_447965.1| - 0.0013 18.7 7.1 0.0014 18.5 4.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4199) DUF4345 PF14248.1 gi|84489733|ref|YP_447965.1| - 0.0017 17.8 1.6 0.0029 17.0 1.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4345) DUF2537 PF10801.3 gi|84489733|ref|YP_447965.1| - 0.0048 16.9 1.2 0.0063 16.5 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2537) DUF4400 PF14348.1 gi|84489733|ref|YP_447965.1| - 0.062 12.6 0.1 0.096 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) zinc_ribbon_2 PF13240.1 gi|84489735|ref|YP_447967.1| - 0.0063 15.9 1.5 0.016 14.6 1.0 1.8 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489735|ref|YP_447967.1| - 0.043 13.6 0.4 0.043 13.6 0.3 2.2 2 0 0 2 2 2 0 Double zinc ribbon IBR PF01485.16 gi|84489735|ref|YP_447967.1| - 2.8 7.8 10.7 1.6 8.6 0.3 2.7 2 1 0 2 2 2 0 IBR domain MULE PF10551.4 gi|84489736|ref|YP_447968.1| - 0.0028 17.7 0.1 0.0042 17.2 0.0 1.3 1 0 0 1 1 1 1 MULE transposase domain Lzipper-MIP1 PF14389.1 gi|84489736|ref|YP_447968.1| - 0.045 13.8 0.8 0.28 11.3 0.2 2.1 1 1 1 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 DUF1160 PF06648.6 gi|84489736|ref|YP_447968.1| - 0.11 12.2 5.3 0.17 11.7 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) YlqD PF11068.3 gi|84489736|ref|YP_447968.1| - 1 9.3 8.4 12 5.9 3.1 2.1 1 1 1 2 2 2 0 YlqD protein HAND PF09110.6 gi|84489736|ref|YP_447968.1| - 2.6 8.4 8.8 5.1 7.5 6.1 1.5 1 1 0 1 1 1 0 HAND RNA_pol_Rpb1_5 PF04998.12 gi|84489736|ref|YP_447968.1| - 3.4 6.8 6.8 3.6 6.7 4.7 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Topo-VIb_trans PF09239.6 gi|84489737|ref|YP_447969.1| - 0.081 12.4 0.8 0.096 12.2 0.5 1.1 1 0 0 1 1 1 0 Topoisomerase VI B subunit, transducer DUF694 PF05107.7 gi|84489740|ref|YP_447972.1| - 2.9e-45 154.6 2.6 3.4e-45 154.4 1.8 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF694) Cas_Cas5d PF09704.5 gi|84489741|ref|YP_447973.1| - 6.8e-06 25.8 0.0 2.1e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DEAD PF00270.24 gi|84489742|ref|YP_447974.1| - 3.6e-09 36.3 0.2 1.8e-08 34.0 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|84489742|ref|YP_447974.1| - 4.8e-08 33.0 0.1 4.8e-08 33.0 0.1 4.3 4 1 1 5 5 5 1 Type III restriction enzyme, res subunit PhoH PF02562.11 gi|84489742|ref|YP_447974.1| - 3.1e-05 23.3 0.0 0.013 14.7 0.0 2.7 2 0 0 2 2 2 2 PhoH-like protein Helicase_C PF00271.26 gi|84489742|ref|YP_447974.1| - 0.00016 21.4 0.3 0.0006 19.6 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HD PF01966.17 gi|84489742|ref|YP_447974.1| - 0.0058 16.6 0.3 0.019 14.9 0.0 2.1 2 0 0 2 2 2 1 HD domain Cas_Cas6 PF01881.11 gi|84489743|ref|YP_447975.1| - 7.6e-39 133.4 8.6 7.6e-39 133.4 6.0 2.1 1 1 1 2 2 2 1 CRISPR associated protein Cas6 DUF2276 PF10040.4 gi|84489743|ref|YP_447975.1| - 0.045 13.9 0.2 0.11 12.6 0.2 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2276) CRISPR_assoc PF08798.6 gi|84489743|ref|YP_447975.1| - 0.11 12.1 0.1 0.23 11.1 0.0 1.5 2 0 0 2 2 2 0 CRISPR associated protein Cas_Cas4 PF01930.12 gi|84489744|ref|YP_447976.1| - 6.3e-57 192.0 12.6 7.1e-57 191.8 8.7 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|84489744|ref|YP_447976.1| - 3.3e-08 33.2 0.8 3.5e-08 33.1 0.5 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF91 PF01939.11 gi|84489744|ref|YP_447976.1| - 0.0042 16.2 1.2 0.0052 15.9 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF91 DUF2670 PF10875.3 gi|84489744|ref|YP_447976.1| - 0.01 15.8 1.1 0.015 15.3 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) TF_AP-2 PF03299.9 gi|84489744|ref|YP_447976.1| - 0.2 11.1 3.1 0.13 11.7 0.5 1.7 1 1 1 2 2 2 0 Transcription factor AP-2 CutA1 PF03091.10 gi|84489744|ref|YP_447976.1| - 10 5.8 9.7 0.68 9.6 1.5 2.2 1 1 1 2 2 2 0 CutA1 divalent ion tolerance protein Cas_Cas1 PF01867.11 gi|84489745|ref|YP_447977.1| - 4.6e-88 294.9 6.8 5.6e-88 294.6 4.7 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.4 gi|84489746|ref|YP_447978.1| - 1.4e-24 85.9 0.6 1.6e-24 85.8 0.4 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Chordopox_G3 PF06129.7 gi|84489746|ref|YP_447978.1| - 0.049 13.7 0.7 0.071 13.2 0.5 1.3 1 1 0 1 1 1 0 Chordopoxvirus G3 protein DUF835 PF05763.7 gi|84489746|ref|YP_447978.1| - 0.088 12.3 0.7 0.11 12.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF835) Ribosomal_S24e PF01282.14 gi|84489746|ref|YP_447978.1| - 0.11 12.2 0.1 0.19 11.5 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein S24e PCRF PF03462.13 gi|84489746|ref|YP_447978.1| - 0.12 12.0 0.1 0.19 11.4 0.0 1.4 1 1 0 1 1 1 0 PCRF domain RVP_2 PF08284.6 gi|84489752|ref|YP_447984.1| - 0.14 12.0 0.2 0.22 11.4 0.1 1.3 1 1 0 1 1 1 0 Retroviral aspartyl protease DUF4389 PF14333.1 gi|84489752|ref|YP_447984.1| - 0.72 9.5 3.5 1.1 9.0 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) NKAIN PF05640.9 gi|84489753|ref|YP_447985.1| - 0.48 9.3 6.4 0.62 8.9 4.5 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein DUF1212 PF06738.7 gi|84489754|ref|YP_447986.1| - 0.11 11.9 1.1 0.12 11.8 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) DUF3784 PF12650.2 gi|84489754|ref|YP_447986.1| - 0.72 9.8 5.7 0.95 9.4 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF4253 PF14062.1 gi|84489755|ref|YP_447987.1| - 0.13 11.9 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) RHH_1 PF01402.16 gi|84489755|ref|YP_447987.1| - 2.4 8.2 4.1 9.9 6.2 0.0 2.7 3 1 0 3 3 3 0 Ribbon-helix-helix protein, copG family Plasmid_stabil PF05016.9 gi|84489756|ref|YP_447988.1| - 1.2e-05 25.6 0.1 1.5e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 Plasmid stabilisation system protein Surf_Ag_VNR PF07244.10 gi|84489756|ref|YP_447988.1| - 0.04 14.3 0.0 0.051 13.9 0.0 1.2 1 0 0 1 1 1 0 Surface antigen variable number repeat ABC_tran PF00005.22 gi|84489757|ref|YP_447989.1| - 1.8e-33 115.7 0.0 4.7e-33 114.4 0.0 1.7 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489757|ref|YP_447989.1| - 7.2e-17 62.2 0.1 4.8e-10 39.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|84489757|ref|YP_447989.1| - 9.8e-10 38.0 0.1 7e-05 22.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|84489757|ref|YP_447989.1| - 1.5e-08 34.1 2.7 0.002 17.2 0.0 2.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_16 PF13191.1 gi|84489757|ref|YP_447989.1| - 8.5e-07 29.1 0.0 1e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|84489757|ref|YP_447989.1| - 1.9e-06 27.2 0.0 3.5e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|84489757|ref|YP_447989.1| - 5.1e-06 26.6 0.0 9.7e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.4 gi|84489757|ref|YP_447989.1| - 1.7e-05 23.6 0.1 0.21 10.1 0.0 3.0 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_23 PF13476.1 gi|84489757|ref|YP_447989.1| - 2e-05 25.0 0.6 2.7e-05 24.6 0.4 1.5 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 gi|84489757|ref|YP_447989.1| - 3.9e-05 22.3 0.0 0.013 14.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|84489757|ref|YP_447989.1| - 7e-05 22.0 0.1 0.00013 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_10 PF12846.2 gi|84489757|ref|YP_447989.1| - 0.00015 21.3 0.0 0.0072 15.8 0.0 2.6 3 0 0 3 3 3 1 AAA-like domain AAA_14 PF13173.1 gi|84489757|ref|YP_447989.1| - 0.00054 19.8 0.0 0.02 14.7 0.0 2.2 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|84489757|ref|YP_447989.1| - 0.00085 20.1 0.1 0.0017 19.1 0.1 1.8 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|84489757|ref|YP_447989.1| - 0.0017 18.1 0.1 0.007 16.0 0.1 2.0 1 1 0 1 1 1 1 Archaeal ATPase NB-ARC PF00931.17 gi|84489757|ref|YP_447989.1| - 0.002 17.0 0.0 0.003 16.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_18 PF13238.1 gi|84489757|ref|YP_447989.1| - 0.0023 18.2 0.0 0.0053 17.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|84489757|ref|YP_447989.1| - 0.0023 18.1 0.4 0.033 14.4 0.3 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 gi|84489757|ref|YP_447989.1| - 0.0053 16.1 0.0 0.056 12.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain SbcCD_C PF13558.1 gi|84489757|ref|YP_447989.1| - 0.0057 16.5 0.2 0.057 13.3 0.1 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Rad17 PF03215.10 gi|84489757|ref|YP_447989.1| - 0.0064 15.2 0.0 0.011 14.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_28 PF13521.1 gi|84489757|ref|YP_447989.1| - 0.0097 15.8 0.2 0.29 11.0 0.1 2.2 1 1 0 2 2 2 1 AAA domain MutS_V PF00488.16 gi|84489757|ref|YP_447989.1| - 0.011 15.1 0.1 0.03 13.7 0.0 1.7 2 0 0 2 2 2 0 MutS domain V NACHT PF05729.7 gi|84489757|ref|YP_447989.1| - 0.012 15.3 0.0 0.014 15.0 0.0 1.4 1 1 0 1 1 1 0 NACHT domain MobB PF03205.9 gi|84489757|ref|YP_447989.1| - 0.012 15.2 0.3 0.032 13.9 0.0 1.8 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 gi|84489757|ref|YP_447989.1| - 0.012 15.4 0.0 0.031 14.1 0.0 1.7 2 0 0 2 2 1 0 AAA domain MMR_HSR1 PF01926.18 gi|84489757|ref|YP_447989.1| - 0.013 15.4 0.1 0.019 14.9 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Miro PF08477.8 gi|84489757|ref|YP_447989.1| - 0.019 15.4 0.0 0.043 14.3 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein IstB_IS21 PF01695.12 gi|84489757|ref|YP_447989.1| - 0.023 14.1 0.0 0.21 10.9 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SE PF00437.15 gi|84489757|ref|YP_447989.1| - 0.035 13.0 0.1 0.071 12.0 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein Adeno_IVa2 PF02456.10 gi|84489757|ref|YP_447989.1| - 0.035 12.7 0.3 0.24 10.0 0.0 2.0 2 0 0 2 2 2 0 Adenovirus IVa2 protein AAA_19 PF13245.1 gi|84489757|ref|YP_447989.1| - 0.048 13.4 0.0 0.12 12.1 0.0 1.6 2 0 0 2 2 1 0 Part of AAA domain AAA_30 PF13604.1 gi|84489757|ref|YP_447989.1| - 0.062 12.8 0.0 0.14 11.7 0.0 1.5 2 0 0 2 2 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|84489757|ref|YP_447989.1| - 0.066 12.6 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Fibrillarin PF01269.12 gi|84489757|ref|YP_447989.1| - 0.07 12.0 0.2 0.44 9.4 0.0 1.9 2 0 0 2 2 2 0 Fibrillarin ArgK PF03308.11 gi|84489757|ref|YP_447989.1| - 0.082 11.6 0.0 0.12 11.0 0.0 1.3 1 0 0 1 1 1 0 ArgK protein UPF0079 PF02367.12 gi|84489757|ref|YP_447989.1| - 0.086 12.4 0.1 0.19 11.3 0.0 1.6 2 0 0 2 2 1 0 Uncharacterised P-loop hydrolase UPF0079 G-alpha PF00503.15 gi|84489757|ref|YP_447989.1| - 0.086 11.5 0.0 0.11 11.1 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit cobW PF02492.14 gi|84489757|ref|YP_447989.1| - 0.092 12.1 0.0 0.22 10.9 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.9 gi|84489757|ref|YP_447989.1| - 0.099 12.3 0.1 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.12 gi|84489757|ref|YP_447989.1| - 0.11 12.2 0.1 0.3 10.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function DUF87 BPD_transp_1 PF00528.17 gi|84489758|ref|YP_447990.1| - 9.2e-21 74.1 17.5 1.3e-20 73.6 12.2 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_3 PF00497.15 gi|84489759|ref|YP_447991.1| - 2.7e-56 190.3 0.8 3.4e-56 189.9 0.5 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|84489759|ref|YP_447991.1| - 5.2e-07 29.3 0.1 1.1e-06 28.1 0.2 1.4 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.6 gi|84489759|ref|YP_447991.1| - 0.0017 18.0 0.2 0.0061 16.1 0.1 1.9 2 0 0 2 2 2 1 NMT1/THI5 like DUF4013 PF13197.1 gi|84489760|ref|YP_447992.1| - 3.4e-26 91.5 24.3 3.4e-26 91.5 16.9 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) DUF3609 PF12259.3 gi|84489760|ref|YP_447992.1| - 0.11 11.1 0.1 0.11 11.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3609) MARVEL PF01284.18 gi|84489760|ref|YP_447992.1| - 0.28 10.9 14.7 1 9.1 4.5 2.8 2 1 0 2 2 2 0 Membrane-associating domain DUF4013 PF13197.1 gi|84489761|ref|YP_447993.1| - 9.3e-23 80.4 27.8 9.3e-23 80.4 19.3 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF4013) DUF818 PF05677.7 gi|84489761|ref|YP_447993.1| - 7.6 5.1 8.3 1.8 7.2 3.4 1.7 1 1 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) CarboxypepD_reg PF13620.1 gi|84489762|ref|YP_447994.1| - 9.1e-06 25.6 18.0 0.0036 17.3 1.0 5.0 5 0 0 5 5 5 2 Carboxypeptidase regulatory-like domain Nitroreductase PF00881.19 gi|84489764|ref|YP_447996.1| - 4.9e-25 88.2 0.0 6.7e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Baculo_E66 PF04850.7 gi|84489764|ref|YP_447996.1| - 0.077 11.9 0.1 0.097 11.6 0.0 1.1 1 0 0 1 1 1 0 Baculovirus E66 occlusion-derived virus envelope protein ApbA_C PF08546.6 gi|84489765|ref|YP_447997.1| - 1.8e-33 115.1 0.0 2.7e-33 114.6 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.11 gi|84489765|ref|YP_447997.1| - 4.7e-19 68.3 0.0 9.6e-18 64.0 0.0 2.1 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.18 gi|84489765|ref|YP_447997.1| - 2.8e-05 23.8 0.0 4.5e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFO_IDH_MocA PF01408.17 gi|84489765|ref|YP_447997.1| - 0.016 15.6 0.0 0.034 14.6 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N PF00107.21 gi|84489766|ref|YP_447998.1| - 1.3e-19 70.0 0.2 2.1e-19 69.3 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.7 gi|84489766|ref|YP_447998.1| - 2.8e-16 59.2 0.0 1.1e-15 57.3 0.0 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.1 gi|84489766|ref|YP_447998.1| - 0.00084 20.2 0.0 0.0015 19.3 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase APG6 PF04111.7 gi|84489767|ref|YP_447999.1| - 0.017 14.2 7.8 0.023 13.7 5.4 1.3 1 0 0 1 1 1 0 Autophagy protein Apg6 DUF116 PF01976.12 gi|84489769|ref|YP_448001.1| - 6.1e-47 159.0 9.1 1.4e-46 157.8 6.3 1.7 1 1 0 1 1 1 1 Protein of unknown function DUF116 YPEB PF14620.1 gi|84489769|ref|YP_448001.1| - 0.0063 15.5 1.3 0.0074 15.3 0.9 1.3 1 0 0 1 1 1 1 YpeB sporulation UN_NPL4 PF11543.3 gi|84489769|ref|YP_448001.1| - 0.19 12.0 2.7 1.9 8.8 0.0 2.8 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 zf-3CxxC PF13695.1 gi|84489769|ref|YP_448001.1| - 3.6 7.8 10.3 0.16 12.2 1.5 2.7 3 0 0 3 3 3 0 Zinc-binding domain IFN-gamma PF00714.12 gi|84489769|ref|YP_448001.1| - 3.6 7.4 10.4 1 9.2 0.3 3.1 2 1 1 3 3 3 0 Interferon gamma TetR_N PF00440.18 gi|84489770|ref|YP_448002.1| - 4e-11 42.3 0.0 7.2e-11 41.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family CENP-B_N PF04218.8 gi|84489770|ref|YP_448002.1| - 0.0019 17.5 0.5 0.0038 16.6 0.1 1.8 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain DUF3793 PF12672.2 gi|84489770|ref|YP_448002.1| - 0.022 14.3 1.6 0.044 13.3 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) HTH_26 PF13443.1 gi|84489770|ref|YP_448002.1| - 0.068 13.3 0.1 0.18 12.0 0.1 1.7 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF95 PF01944.12 gi|84489771|ref|YP_448003.1| - 3.6e-29 101.6 21.1 3.6e-29 101.6 14.6 2.2 2 1 0 2 2 2 1 Integral membrane protein DUF95 2-ph_phosp PF04029.9 gi|84489772|ref|YP_448004.1| - 6.5e-65 218.3 9.8 7.3e-65 218.1 6.8 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase Herpes_U55 PF06501.6 gi|84489772|ref|YP_448004.1| - 0.18 10.3 2.4 0.24 9.8 1.6 1.1 1 0 0 1 1 1 0 Human herpesvirus U55 protein Sipho_tail PF05709.6 gi|84489772|ref|YP_448004.1| - 0.36 9.9 5.1 0.78 8.8 3.5 1.6 1 1 0 1 1 1 0 Phage tail protein TatD_DNase PF01026.16 gi|84489773|ref|YP_448005.1| - 2.6e-66 223.4 0.1 2.9e-66 223.2 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.9 gi|84489773|ref|YP_448005.1| - 0.034 13.6 0.0 0.34 10.4 0.0 2.3 1 1 1 2 2 2 0 Amidohydrolase MmlI PF09448.5 gi|84489773|ref|YP_448005.1| - 0.079 12.7 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Methylmuconolactone methyl-isomerase DUF3437 PF11919.3 gi|84489773|ref|YP_448005.1| - 0.098 12.3 0.0 0.24 11.1 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DZR PF12773.2 gi|84489774|ref|YP_448006.1| - 0.0016 18.2 0.9 0.0033 17.1 0.6 1.5 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489774|ref|YP_448006.1| - 0.0055 15.8 1.0 0.011 14.9 0.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489774|ref|YP_448006.1| - 0.026 14.0 3.7 0.053 13.0 2.6 1.6 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|84489774|ref|YP_448006.1| - 0.029 13.6 1.1 0.083 12.2 0.8 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding DUF955 PF06114.8 gi|84489774|ref|YP_448006.1| - 0.07 12.8 0.8 0.24 11.1 0.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF955) DNA_RNApol_7kD PF03604.8 gi|84489774|ref|YP_448006.1| - 0.71 9.4 4.5 2 7.9 3.1 1.8 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.1 gi|84489775|ref|YP_448007.1| - 1.1e-05 24.7 1.4 2.7e-05 23.5 1.0 1.7 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84489775|ref|YP_448007.1| - 1.7e-05 24.5 0.2 2.7e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489775|ref|YP_448007.1| - 9.5e-05 21.4 1.3 0.00016 20.7 0.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-NADH-PPase PF09297.6 gi|84489775|ref|YP_448007.1| - 0.13 11.7 1.0 1.3 8.5 0.6 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain CbiM PF01891.11 gi|84489776|ref|YP_448008.1| - 1.7e-39 135.5 17.8 1.9e-39 135.3 12.4 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region Aldo_ket_red PF00248.16 gi|84489777|ref|YP_448009.1| - 5.5e-43 146.8 0.1 8.7e-43 146.1 0.0 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_18 PF13746.1 gi|84489777|ref|YP_448009.1| - 2.3e-09 37.5 8.9 7.1e-05 23.1 0.3 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489777|ref|YP_448009.1| - 8.1e-08 32.5 8.8 2.1e-07 31.1 6.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489777|ref|YP_448009.1| - 2.3e-07 30.7 5.7 5.4e-07 29.5 3.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489777|ref|YP_448009.1| - 1e-06 28.8 7.7 1e-06 28.8 5.3 2.1 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489777|ref|YP_448009.1| - 1.4e-06 28.5 5.3 1.4e-06 28.5 3.7 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84489777|ref|YP_448009.1| - 1.4e-05 24.4 13.6 0.00084 18.8 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_20 PF14691.1 gi|84489777|ref|YP_448009.1| - 5.5e-05 22.7 11.8 0.013 15.1 1.4 2.6 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.1 gi|84489777|ref|YP_448009.1| - 0.032 14.0 12.8 0.043 13.6 0.4 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489777|ref|YP_448009.1| - 0.095 12.5 20.3 0.039 13.7 2.8 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489777|ref|YP_448009.1| - 0.36 11.2 20.1 0.3 11.5 3.1 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489777|ref|YP_448009.1| - 0.57 10.2 19.2 0.096 12.6 2.0 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain zf-CXXC PF02008.15 gi|84489777|ref|YP_448009.1| - 1.1 9.0 9.7 1.7 8.5 1.6 2.7 2 0 0 2 2 2 0 CXXC zinc finger domain Fer4_16 PF13484.1 gi|84489777|ref|YP_448009.1| - 1.2 9.9 17.9 0.93 10.2 9.4 2.8 2 1 2 4 4 3 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|84489777|ref|YP_448009.1| - 1.9 9.2 13.0 4.1 8.2 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84489777|ref|YP_448009.1| - 8 6.5 17.7 1.5 8.7 2.4 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain CcdA PF07362.7 gi|84489778|ref|YP_448010.1| - 0.03 14.2 0.9 0.03 14.2 0.7 1.8 2 1 0 2 2 2 0 Post-segregation antitoxin CcdA Ax_dynein_light PF10211.4 gi|84489778|ref|YP_448010.1| - 0.033 14.0 10.1 0.043 13.6 7.0 1.3 1 1 0 1 1 1 0 Axonemal dynein light chain L_lactis_ph-MCP PF06673.6 gi|84489778|ref|YP_448010.1| - 0.1 11.3 3.0 0.13 11.0 2.1 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein DUF484 PF04340.7 gi|84489778|ref|YP_448010.1| - 0.16 11.3 1.0 0.2 11.1 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF484 FlxA PF14282.1 gi|84489778|ref|YP_448010.1| - 0.19 11.6 8.9 0.22 11.5 3.1 2.1 1 1 1 2 2 2 0 FlxA-like protein Laminin_II PF06009.7 gi|84489778|ref|YP_448010.1| - 0.23 11.2 7.9 0.33 10.6 5.5 1.4 1 1 0 1 1 1 0 Laminin Domain II ACCA PF03255.9 gi|84489778|ref|YP_448010.1| - 0.29 10.6 4.0 0.36 10.3 2.4 1.5 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Mitofilin PF09731.4 gi|84489778|ref|YP_448010.1| - 0.3 9.7 8.3 0.3 9.6 5.8 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Osmo_CC PF08946.5 gi|84489778|ref|YP_448010.1| - 0.46 10.5 13.1 0.12 12.3 3.3 3.0 1 1 2 3 3 3 0 Osmosensory transporter coiled coil Med12-PQL PF12144.3 gi|84489779|ref|YP_448011.1| - 0.058 12.7 0.1 0.16 11.3 0.0 1.7 1 0 0 1 1 1 0 Eukaryotic Mediator 12 catenin-binding domain ABM PF03992.11 gi|84489780|ref|YP_448012.1| - 2.9e-15 56.0 0.0 3.5e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase MS_channel PF00924.13 gi|84489781|ref|YP_448013.1| - 2e-38 131.8 4.7 2e-38 131.8 3.3 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel UPF0104 PF03706.8 gi|84489781|ref|YP_448013.1| - 3.7 6.7 8.5 6 6.0 5.9 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0104) Chlam_PMP PF02415.12 gi|84489782|ref|YP_448014.1| - 2.4e-15 55.7 148.6 0.009 16.2 3.4 18.2 18 1 0 18 18 18 12 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Big_1 PF02369.11 gi|84489782|ref|YP_448014.1| - 0.00049 19.9 4.3 0.00049 19.9 3.0 9.8 9 4 2 12 12 12 3 Bacterial Ig-like domain (group 1) Peptidase_U32 PF01136.14 gi|84489783|ref|YP_448015.1| - 1.1e-95 319.0 0.1 7.1e-74 247.6 0.0 2.3 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|84489783|ref|YP_448015.1| - 1.2e-22 80.2 0.0 2.6e-22 79.1 0.0 1.7 1 0 0 1 1 1 1 Collagenase SET PF00856.23 gi|84489783|ref|YP_448015.1| - 0.033 14.5 0.0 0.073 13.3 0.0 1.6 1 0 0 1 1 1 0 SET domain Acetyltransf_7 PF13508.1 gi|84489784|ref|YP_448016.1| - 0.00047 20.2 0.1 0.00081 19.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|84489784|ref|YP_448016.1| - 0.041 13.9 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family FR47 PF08445.5 gi|84489784|ref|YP_448016.1| - 0.06 13.0 0.0 2.1 8.1 0.0 2.3 2 0 0 2 2 2 0 FR47-like protein Adenylsucc_synt PF00709.16 gi|84489785|ref|YP_448017.1| - 9.2e-93 311.1 0.2 2.3e-44 151.7 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase PHO4 PF01384.15 gi|84489786|ref|YP_448018.1| - 0.0083 14.8 1.6 0.009 14.6 1.1 1.1 1 0 0 1 1 1 1 Phosphate transporter family DUF2628 PF10947.3 gi|84489786|ref|YP_448018.1| - 1.1 9.0 9.0 1.6 8.5 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) TM2 PF05154.11 gi|84489786|ref|YP_448018.1| - 1.2 9.3 10.1 3.5 7.9 7.0 1.8 1 1 0 1 1 1 0 TM2 domain Yip1 PF04893.12 gi|84489786|ref|YP_448018.1| - 3.8 6.9 12.2 6 6.3 8.4 1.3 1 1 0 1 1 1 0 Yip1 domain DUF2614 PF11023.3 gi|84489786|ref|YP_448018.1| - 3.9 7.2 6.3 4.8 6.9 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2614) Pmp3 PF01679.12 gi|84489786|ref|YP_448018.1| - 4.5 7.0 11.3 35 4.1 7.8 2.1 1 1 0 1 1 1 0 Proteolipid membrane potential modulator DUF1212 PF06738.7 gi|84489786|ref|YP_448018.1| - 5.6 6.3 7.5 7.2 6.0 5.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1212) TP_methylase PF00590.15 gi|84489787|ref|YP_448019.1| - 1.7e-42 145.4 0.2 2.1e-42 145.2 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|84489787|ref|YP_448019.1| - 7.9e-05 22.8 0.1 0.0004 20.5 0.0 2.1 1 1 1 2 2 2 1 Radical SAM superfamily DUF777 PF05606.6 gi|84489787|ref|YP_448019.1| - 0.062 12.4 0.5 4.9 6.3 0.1 2.2 2 0 0 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) Glycos_transf_2 PF00535.21 gi|84489788|ref|YP_448020.1| - 1.9e-24 86.2 0.0 2.6e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489788|ref|YP_448020.1| - 1.2e-06 28.4 0.0 1.6e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|84489788|ref|YP_448020.1| - 0.00095 18.4 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|84489788|ref|YP_448020.1| - 0.0022 18.2 0.0 0.0035 17.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 PIRT PF15099.1 gi|84489788|ref|YP_448020.1| - 0.043 13.0 3.3 0.079 12.1 2.3 1.4 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family DUF2207 PF09972.4 gi|84489788|ref|YP_448020.1| - 0.15 10.5 2.8 0.19 10.2 1.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Epimerase PF01370.16 gi|84489789|ref|YP_448021.1| - 1.2e-55 188.5 0.0 2e-55 187.8 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|84489789|ref|YP_448021.1| - 7.1e-11 41.5 0.0 5e-09 35.4 0.0 2.3 2 0 0 2 2 2 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|84489789|ref|YP_448021.1| - 3.9e-10 39.1 0.0 9.5e-10 37.8 0.0 1.7 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|84489789|ref|YP_448021.1| - 6.2e-10 38.2 0.0 4.8e-09 35.3 0.0 2.0 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|84489789|ref|YP_448021.1| - 2.7e-08 33.0 0.0 6e-08 31.9 0.0 1.6 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.20 gi|84489789|ref|YP_448021.1| - 8.7e-07 29.0 0.0 2.8e-06 27.3 0.0 1.8 2 0 0 2 2 2 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|84489789|ref|YP_448021.1| - 2.1e-06 27.8 0.0 3.2e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding KR PF08659.5 gi|84489789|ref|YP_448021.1| - 0.0021 17.7 0.0 0.0099 15.5 0.0 1.9 1 1 1 2 2 2 1 KR domain NmrA PF05368.8 gi|84489789|ref|YP_448021.1| - 0.011 15.0 0.0 0.02 14.1 0.0 1.5 1 0 0 1 1 1 0 NmrA-like family Glycos_transf_1 PF00534.15 gi|84489790|ref|YP_448022.1| - 1.4e-36 125.4 0.1 3.1e-36 124.3 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|84489790|ref|YP_448022.1| - 1e-14 54.8 0.0 2.2e-14 53.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|84489790|ref|YP_448022.1| - 3.1e-06 27.0 0.0 4.9e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|84489790|ref|YP_448022.1| - 0.00017 21.7 0.0 0.0025 18.0 0.0 2.6 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|84489790|ref|YP_448022.1| - 0.00093 19.3 0.0 0.0012 18.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain AP_endonuc_2 PF01261.19 gi|84489791|ref|YP_448023.1| - 2.3e-28 98.9 0.1 2.9e-28 98.6 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF3882 PF07066.6 gi|84489791|ref|YP_448023.1| - 0.028 14.2 1.6 0.21 11.4 0.0 2.5 2 1 1 3 3 3 0 Lactococcus phage M3 protein Epimerase PF01370.16 gi|84489792|ref|YP_448024.1| - 2.6e-40 138.3 0.1 3.2e-40 138.0 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|84489792|ref|YP_448024.1| - 3.6e-17 61.9 0.1 6.2e-17 61.1 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.7 gi|84489792|ref|YP_448024.1| - 2.2e-16 59.5 0.1 6.6e-13 48.1 0.0 2.1 1 1 0 2 2 2 2 Male sterility protein RmlD_sub_bind PF04321.12 gi|84489792|ref|YP_448024.1| - 1.9e-14 53.2 0.0 2.4e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|84489792|ref|YP_448024.1| - 9e-11 42.1 0.0 1.3e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding Polysacc_synt_2 PF02719.10 gi|84489792|ref|YP_448024.1| - 2.3e-07 29.9 0.0 2.5e-05 23.3 0.0 2.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein adh_short PF00106.20 gi|84489792|ref|YP_448024.1| - 2.5e-05 24.2 0.0 0.0012 18.8 0.0 2.2 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|84489792|ref|YP_448024.1| - 0.093 11.9 0.2 0.38 9.9 0.0 1.9 2 0 0 2 2 2 0 NmrA-like family Trns_repr_metal PF02583.12 gi|84489793|ref|YP_448025.1| - 3.6e-29 100.7 0.4 4.3e-29 100.5 0.3 1.0 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor TPR_8 PF13181.1 gi|84489793|ref|YP_448025.1| - 0.03 14.0 0.4 1.4 8.8 0.0 2.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Rib_5-P_isom_A PF06026.9 gi|84489794|ref|YP_448026.1| - 5.5e-63 211.3 0.7 6.7e-63 211.1 0.5 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|84489794|ref|YP_448026.1| - 1.4e-09 37.8 0.0 6.8e-06 25.8 0.0 2.2 1 1 1 2 2 2 2 DeoR C terminal sensor domain Sugar-bind PF04198.8 gi|84489794|ref|YP_448026.1| - 0.044 12.6 0.0 0.068 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain UPF0179 PF03684.8 gi|84489795|ref|YP_448027.1| - 5.5e-44 149.2 6.7 6e-44 149.0 4.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) PBCV_basic_adap PF08789.5 gi|84489795|ref|YP_448027.1| - 0.033 13.8 0.0 0.076 12.6 0.0 1.6 1 0 0 1 1 1 0 PBCV-specific basic adaptor domain GUB_WAK_bind PF13947.1 gi|84489795|ref|YP_448027.1| - 0.37 11.3 6.0 0.33 11.5 1.5 2.1 2 0 0 2 2 2 0 Wall-associated receptor kinase galacturonan-binding Fe-ADH_2 PF13685.1 gi|84489796|ref|YP_448028.1| - 1.8e-66 224.0 3.7 2.3e-66 223.6 2.6 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|84489796|ref|YP_448028.1| - 1.3e-28 99.6 3.7 2.8e-28 98.6 2.6 1.4 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|84489796|ref|YP_448028.1| - 9.2e-09 34.5 0.8 3.5e-08 32.6 0.6 1.8 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.15 gi|84489796|ref|YP_448028.1| - 0.051 12.8 2.0 0.077 12.2 1.1 1.6 1 1 0 1 1 1 0 AIR carboxylase MIP PF00230.15 gi|84489797|ref|YP_448029.1| - 1.2e-46 158.9 18.5 1.4e-46 158.7 12.8 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF3802 PF12290.3 gi|84489798|ref|YP_448030.1| - 0.099 12.9 8.0 0.099 12.9 1.1 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3802) SRP54_N PF02881.14 gi|84489798|ref|YP_448030.1| - 0.36 10.9 5.4 0.48 10.5 1.7 2.5 1 1 1 2 2 2 0 SRP54-type protein, helical bundle domain ABC_tran PF00005.22 gi|84489799|ref|YP_448031.1| - 1e-32 113.3 0.0 1.6e-32 112.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|84489799|ref|YP_448031.1| - 1.4e-14 54.7 0.0 2.3e-08 34.3 0.0 2.5 1 1 1 2 2 2 2 AAA domain DUF258 PF03193.11 gi|84489799|ref|YP_448031.1| - 5.5e-05 22.3 0.0 9.9e-05 21.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|84489799|ref|YP_448031.1| - 0.00013 21.1 0.6 0.2 10.6 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain ABC_ATPase PF09818.4 gi|84489799|ref|YP_448031.1| - 0.00015 20.5 0.1 0.0031 16.1 0.0 2.1 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_16 PF13191.1 gi|84489799|ref|YP_448031.1| - 0.00016 21.7 0.0 0.00024 21.1 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|84489799|ref|YP_448031.1| - 0.0012 19.6 0.4 0.0052 17.5 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84489799|ref|YP_448031.1| - 0.0023 18.2 0.1 0.072 13.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|84489799|ref|YP_448031.1| - 0.0024 18.0 0.0 0.013 15.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|84489799|ref|YP_448031.1| - 0.0048 16.7 0.0 0.0078 16.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain SRPRB PF09439.5 gi|84489799|ref|YP_448031.1| - 0.0069 15.6 0.0 0.35 10.0 0.0 2.3 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA_23 PF13476.1 gi|84489799|ref|YP_448031.1| - 0.008 16.5 1.5 0.0092 16.3 1.0 1.7 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.4 gi|84489799|ref|YP_448031.1| - 0.013 14.9 0.0 0.036 13.5 0.0 1.8 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.9 gi|84489799|ref|YP_448031.1| - 0.014 15.0 0.1 0.11 12.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Arch_ATPase PF01637.13 gi|84489799|ref|YP_448031.1| - 0.015 15.0 0.6 0.062 12.9 0.0 2.0 2 1 0 2 2 2 0 Archaeal ATPase AAA PF00004.24 gi|84489799|ref|YP_448031.1| - 0.016 15.4 0.6 0.043 14.0 0.1 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 gi|84489799|ref|YP_448031.1| - 0.021 14.5 0.1 0.058 13.0 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_28 PF13521.1 gi|84489799|ref|YP_448031.1| - 0.022 14.7 0.0 0.05 13.5 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.1 gi|84489799|ref|YP_448031.1| - 0.024 14.0 0.0 0.057 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|84489799|ref|YP_448031.1| - 0.027 13.9 0.0 0.063 12.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.14 gi|84489799|ref|YP_448031.1| - 0.033 13.3 0.2 1.5 7.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MobB PF03205.9 gi|84489799|ref|YP_448031.1| - 0.045 13.4 0.1 0.1 12.3 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.1 gi|84489799|ref|YP_448031.1| - 0.053 13.4 0.1 0.22 11.4 0.0 2.1 2 1 1 3 3 3 0 AAA domain MMR_HSR1 PF01926.18 gi|84489799|ref|YP_448031.1| - 0.059 13.3 0.1 0.26 11.2 0.0 2.1 1 1 1 2 2 2 0 50S ribosome-binding GTPase NB-ARC PF00931.17 gi|84489799|ref|YP_448031.1| - 0.068 12.0 0.2 0.21 10.4 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain Miro PF08477.8 gi|84489799|ref|YP_448031.1| - 0.074 13.5 0.0 0.86 10.1 0.0 2.3 2 0 0 2 2 2 0 Miro-like protein RNA_helicase PF00910.17 gi|84489799|ref|YP_448031.1| - 0.082 13.0 0.0 0.2 11.8 0.0 1.8 1 0 0 1 1 1 0 RNA helicase ATP-synt_ab PF00006.20 gi|84489799|ref|YP_448031.1| - 0.11 11.9 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain BPD_transp_1 PF00528.17 gi|84489800|ref|YP_448032.1| - 2.1e-23 82.8 16.3 2.1e-23 82.8 11.3 2.5 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF267 PF03268.9 gi|84489800|ref|YP_448032.1| - 0.014 14.2 0.6 0.014 14.2 0.4 2.0 2 1 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF267 Ndc1_Nup PF09531.5 gi|84489800|ref|YP_448032.1| - 6.1 5.1 6.9 1 7.6 2.4 1.6 1 1 1 2 2 2 0 Nucleoporin protein Ndc1-Nup Aminotran_5 PF00266.14 gi|84489801|ref|YP_448033.1| - 3.5e-86 289.2 0.0 4.1e-86 289.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|84489801|ref|YP_448033.1| - 3.6e-08 32.9 0.1 5.3e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|84489801|ref|YP_448033.1| - 4.5e-06 25.9 0.0 1.2e-05 24.5 0.1 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.14 gi|84489801|ref|YP_448033.1| - 0.00091 17.7 0.0 0.0014 17.1 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.11 gi|84489802|ref|YP_448034.1| - 9.5e-50 167.7 0.2 1.1e-49 167.6 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain tRNA-synt_2b PF00587.20 gi|84489803|ref|YP_448035.1| - 1.3e-22 80.1 1.0 4.1e-22 78.5 0.4 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|84489803|ref|YP_448035.1| - 1.2e-18 66.8 1.0 3.4e-18 65.3 0.7 1.9 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.6 gi|84489803|ref|YP_448035.1| - 9.3e-14 51.0 2.8 1e-13 50.9 1.0 1.8 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal YhfH PF14149.1 gi|84489803|ref|YP_448035.1| - 0.7 9.7 8.9 1.6 8.5 0.1 3.1 2 1 0 2 2 2 0 YhfH-like protein YbjQ_1 PF01906.12 gi|84489804|ref|YP_448036.1| - 8.8e-34 116.0 1.2 9.7e-34 115.9 0.8 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding CofC PF01983.11 gi|84489805|ref|YP_448037.1| - 3.1e-67 225.7 1.6 3.8e-67 225.4 1.1 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|84489805|ref|YP_448037.1| - 4.3e-05 23.6 0.0 6e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Phos_pyr_kin PF08543.7 gi|84489806|ref|YP_448038.1| - 6.8e-76 254.7 0.0 8.1e-76 254.4 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.19 gi|84489806|ref|YP_448038.1| - 1.2e-11 44.3 0.0 1.6e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase rpo132 PF12415.3 gi|84489806|ref|YP_448038.1| - 0.0071 15.2 0.1 0.021 13.7 0.1 1.8 1 0 0 1 1 1 1 Poxvirus DNA dependent RNA polymerase Carb_kinase PF01256.12 gi|84489806|ref|YP_448038.1| - 0.011 14.9 0.0 0.018 14.3 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate kinase ACT PF01842.20 gi|84489807|ref|YP_448039.1| - 4.6e-10 38.7 0.0 0.00023 20.5 0.0 2.1 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.1 gi|84489807|ref|YP_448039.1| - 0.0037 17.5 0.4 0.3 11.4 0.1 2.1 2 0 0 2 2 2 2 ACT domain Thr_dehydrat_C PF00585.13 gi|84489807|ref|YP_448039.1| - 0.074 12.6 0.1 0.17 11.5 0.1 1.6 2 0 0 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase AMP-binding_C_2 PF14535.1 gi|84489808|ref|YP_448040.1| - 3.8e-32 110.1 1.3 8.4e-32 109.0 0.6 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|84489808|ref|YP_448040.1| - 2.4e-20 72.3 0.1 5.4e-20 71.1 0.0 1.5 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|84489808|ref|YP_448040.1| - 1.4e-08 33.8 0.1 7.4e-05 21.6 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE Metallophos_2 PF12850.2 gi|84489809|ref|YP_448041.1| - 2.9e-20 72.6 0.0 4.2e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84489809|ref|YP_448041.1| - 5.6e-17 61.7 0.7 8.7e-17 61.1 0.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|84489809|ref|YP_448041.1| - 4.2e-12 45.7 0.0 2.5e-10 39.9 0.0 2.3 2 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily DUF2096 PF09869.4 gi|84489810|ref|YP_448042.1| - 1.8e-65 219.9 1.6 2e-65 219.7 1.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) DUF749 PF05370.6 gi|84489811|ref|YP_448043.1| - 7.5e-40 134.7 1.2 8.3e-40 134.6 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF749) HD_2 PF12917.2 gi|84489811|ref|YP_448043.1| - 0.044 13.5 0.4 0.053 13.3 0.3 1.0 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme CCG PF02754.11 gi|84489812|ref|YP_448044.1| - 2.6e-41 139.5 0.4 4.2e-20 71.5 0.0 2.2 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|84489813|ref|YP_448045.1| - 1.5e-12 47.3 7.0 2.2e-12 46.7 4.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489813|ref|YP_448045.1| - 1.1e-11 44.8 7.8 1.8e-11 44.2 5.4 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489813|ref|YP_448045.1| - 2.9e-08 33.8 5.1 5.3e-08 32.9 3.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489813|ref|YP_448045.1| - 2.2e-06 27.9 5.0 0.005 17.2 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489813|ref|YP_448045.1| - 3.4e-06 27.3 8.7 7.3e-06 26.2 6.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489813|ref|YP_448045.1| - 3.8e-06 26.6 8.0 6.8e-06 25.7 5.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|84489813|ref|YP_448045.1| - 0.00012 21.7 4.2 0.02 14.5 0.6 2.2 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.1 gi|84489813|ref|YP_448045.1| - 0.00021 21.9 4.8 0.28 11.9 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|84489813|ref|YP_448045.1| - 0.0034 16.9 13.4 0.23 11.1 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489813|ref|YP_448045.1| - 0.023 14.5 8.0 0.058 13.2 5.6 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84489813|ref|YP_448045.1| - 0.024 15.1 15.2 0.26 11.9 1.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489813|ref|YP_448045.1| - 0.026 14.4 11.5 0.34 10.9 1.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84489813|ref|YP_448045.1| - 0.32 10.9 12.4 0.19 11.6 1.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84489813|ref|YP_448045.1| - 5.6 7.5 12.1 14 6.3 1.2 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain TGT PF01702.13 gi|84489814|ref|YP_448046.1| - 2.3e-17 63.0 3.9 2.8e-16 59.5 2.7 1.9 1 1 0 1 1 1 1 Queuine tRNA-ribosyltransferase Tau95 PF09734.4 gi|84489814|ref|YP_448046.1| - 0.029 13.6 1.4 0.037 13.3 1.0 1.1 1 0 0 1 1 1 0 RNA polymerase III transcription factor (TF)IIIC subunit DUF559 PF04480.7 gi|84489814|ref|YP_448046.1| - 0.099 12.3 0.4 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF559) HIT PF01230.18 gi|84489814|ref|YP_448046.1| - 0.15 12.6 1.5 0.2 12.1 0.1 1.8 2 0 0 2 2 2 0 HIT domain Orbi_VP6 PF01516.11 gi|84489814|ref|YP_448046.1| - 0.25 10.3 2.4 0.81 8.6 0.1 2.0 2 0 0 2 2 2 0 Orbivirus helicase VP6 PfUIS3 PF11567.3 gi|84489814|ref|YP_448046.1| - 0.99 9.5 9.5 0.24 11.5 3.5 2.0 2 0 0 2 2 2 0 Plasmodium falciparum UIS3 membrane protein TP_methylase PF00590.15 gi|84489816|ref|YP_448048.1| - 7.9e-17 61.6 0.0 9.8e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Met_10 PF02475.11 gi|84489817|ref|YP_448049.1| - 1.2e-68 230.7 1.0 2.3e-68 229.7 0.7 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|84489817|ref|YP_448049.1| - 6.3e-08 32.6 0.0 1e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|84489817|ref|YP_448049.1| - 6.4e-07 29.0 0.2 1.7e-05 24.4 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|84489817|ref|YP_448049.1| - 5.1e-06 25.9 0.0 1.1e-05 24.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.10 gi|84489817|ref|YP_448049.1| - 5.3e-06 25.9 0.0 9.6e-06 25.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.2 gi|84489817|ref|YP_448049.1| - 7.1e-06 26.5 0.0 3e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain TRM PF02005.11 gi|84489817|ref|YP_448049.1| - 9.5e-06 24.7 0.1 1.4e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.5 gi|84489817|ref|YP_448049.1| - 3.7e-05 23.3 0.0 7.7e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.8 gi|84489817|ref|YP_448049.1| - 0.00013 21.2 0.0 0.00029 20.0 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DNA_methylase PF00145.12 gi|84489817|ref|YP_448049.1| - 0.0021 17.2 0.8 0.0099 15.0 0.0 2.1 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase N6_N4_Mtase PF01555.13 gi|84489817|ref|YP_448049.1| - 0.014 14.8 0.1 0.035 13.5 0.1 2.0 1 1 0 1 1 1 0 DNA methylase UPF0020 PF01170.13 gi|84489817|ref|YP_448049.1| - 0.019 14.5 0.0 0.037 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 IF-2B PF01008.12 gi|84489818|ref|YP_448050.1| - 1.9e-73 246.9 0.5 2.7e-73 246.4 0.4 1.2 1 0 0 1 1 1 1 Initiation factor 2 subunit family Asp_decarbox PF02261.11 gi|84489818|ref|YP_448050.1| - 0.06 12.9 0.1 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Aspartate decarboxylase Radical_SAM PF04055.16 gi|84489819|ref|YP_448051.1| - 9.5e-18 64.9 0.1 1.4e-17 64.3 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF970 PF06153.6 gi|84489819|ref|YP_448051.1| - 0.00065 19.6 0.0 0.029 14.3 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF970) Fer4_14 PF13394.1 gi|84489819|ref|YP_448051.1| - 0.0087 16.0 0.1 0.017 15.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|84489819|ref|YP_448051.1| - 0.018 15.1 0.1 0.032 14.3 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF2478 PF10649.4 gi|84489819|ref|YP_448051.1| - 0.15 11.4 0.0 0.25 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2478) DUF2113 PF09886.4 gi|84489820|ref|YP_448052.1| - 6e-67 224.4 1.4 6.6e-67 224.3 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) BcrAD_BadFG PF01869.15 gi|84489821|ref|YP_448053.1| - 4e-57 193.5 8.4 5.8e-57 193.0 5.8 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.1 gi|84489821|ref|YP_448053.1| - 0.01 15.6 1.2 0.17 11.7 0.9 2.6 1 1 0 1 1 1 0 Cell division protein FtsA Hydantoinase_A PF01968.13 gi|84489821|ref|YP_448053.1| - 0.021 13.9 5.8 2.5 7.0 0.1 3.1 3 0 0 3 3 3 0 Hydantoinase/oxoprolinase DNA_pol3_beta_3 PF02768.10 gi|84489821|ref|YP_448053.1| - 0.067 12.7 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III beta subunit, C-terminal domain DUF2112 PF09885.4 gi|84489822|ref|YP_448054.1| - 1.6e-67 225.5 0.0 1.8e-67 225.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) DUF2112 PF09885.4 gi|84489823|ref|YP_448055.1| - 1.2e-58 196.8 0.0 1.4e-58 196.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) DUF2102 PF09875.4 gi|84489824|ref|YP_448056.1| - 5.1e-41 138.4 0.0 6.2e-41 138.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) MvaI_BcnI PF15515.1 gi|84489825|ref|YP_448057.1| - 0.014 15.3 0.2 0.031 14.2 0.1 1.6 1 0 0 1 1 1 0 MvaI/BcnI restriction endonuclease family Cyclophil_like PF04126.8 gi|84489825|ref|YP_448057.1| - 0.018 14.6 0.1 0.55 9.8 0.0 2.5 2 0 0 2 2 2 0 Cyclophilin-like DUF4349 PF14257.1 gi|84489826|ref|YP_448058.1| - 0.018 14.3 0.1 0.021 14.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2951 PF11166.3 gi|84489826|ref|YP_448058.1| - 0.066 13.0 1.2 0.081 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) Carbpep_Y_N PF05388.6 gi|84489826|ref|YP_448058.1| - 0.067 13.3 0.9 0.075 13.1 0.6 1.0 1 0 0 1 1 1 0 Carboxypeptidase Y pro-peptide Med2 PF11214.3 gi|84489826|ref|YP_448058.1| - 0.13 12.3 2.3 0.17 11.9 1.6 1.2 1 0 0 1 1 1 0 Mediator complex subunit 2 Corona_S2 PF01601.11 gi|84489826|ref|YP_448058.1| - 1 7.3 6.4 1 7.3 4.4 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein AIRS PF00586.19 gi|84489827|ref|YP_448059.1| - 8.3e-20 70.8 1.4 1.6e-19 69.9 0.5 1.8 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|84489827|ref|YP_448059.1| - 2.1e-15 57.0 0.0 2.9e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain DUF2117 PF09890.4 gi|84489828|ref|YP_448060.1| - 1.1e-78 263.3 4.4 1.1e-78 263.3 3.0 1.8 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.16 gi|84489828|ref|YP_448060.1| - 0.0047 15.7 0.0 0.0082 14.9 0.0 1.4 1 0 0 1 1 1 1 ATP-NAD kinase NOB1_Zn_bind PF08772.6 gi|84489829|ref|YP_448061.1| - 0.022 14.6 0.9 0.05 13.4 0.6 1.6 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like PIN_4 PF13638.1 gi|84489829|ref|YP_448061.1| - 0.023 14.7 0.4 0.034 14.2 0.2 1.3 1 1 0 1 1 1 0 PIN domain zf-dskA_traR PF01258.12 gi|84489829|ref|YP_448061.1| - 0.026 14.2 1.2 1.1 9.0 0.1 2.3 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger ADK_lid PF05191.9 gi|84489829|ref|YP_448061.1| - 0.046 13.3 3.4 0.19 11.4 2.4 2.0 1 1 0 1 1 1 0 Adenylate kinase, active site lid PB1 PF00564.19 gi|84489829|ref|YP_448061.1| - 0.064 12.9 1.0 0.14 11.8 0.1 2.0 1 1 1 2 2 2 0 PB1 domain Surf_Ag_VNR PF07244.10 gi|84489829|ref|YP_448061.1| - 0.076 13.4 0.2 0.15 12.4 0.2 1.6 1 0 0 1 1 1 0 Surface antigen variable number repeat DZR PF12773.2 gi|84489829|ref|YP_448061.1| - 0.078 12.8 0.4 0.16 11.8 0.3 1.4 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.14 gi|84489829|ref|YP_448061.1| - 0.1 12.2 0.8 0.16 11.6 0.5 1.5 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc-ribbons_6 PF07191.7 gi|84489829|ref|YP_448061.1| - 0.1 12.3 0.3 2.3 8.0 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbons PRC PF05239.11 gi|84489830|ref|YP_448062.1| - 1.6e-13 50.2 1.9 2e-13 49.9 1.3 1.1 1 0 0 1 1 1 1 PRC-barrel domain DUF2783 PF10932.3 gi|84489830|ref|YP_448062.1| - 0.055 12.9 0.0 0.098 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) Pribosyltran PF00156.22 gi|84489831|ref|YP_448063.1| - 1.1e-16 60.6 2.5 6.8e-16 58.1 1.8 2.0 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|84489831|ref|YP_448063.1| - 0.0014 17.8 0.0 0.0023 17.1 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Orthopox_F6 PF06601.7 gi|84489831|ref|YP_448063.1| - 0.051 13.4 1.4 0.13 12.2 0.3 2.0 2 0 0 2 2 2 0 Orthopoxvirus F6 protein PRC PF05239.11 gi|84489832|ref|YP_448064.1| - 3.4e-13 49.2 7.7 2.8e-08 33.4 0.4 2.1 2 0 0 2 2 2 2 PRC-barrel domain DUF2702 PF10863.3 gi|84489832|ref|YP_448064.1| - 0.09 12.4 3.5 1.6 8.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2702) DUF3879 PF12995.2 gi|84489833|ref|YP_448065.1| - 0.072 12.6 1.1 0.077 12.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3879) Lipase_GDSL_3 PF14606.1 gi|84489833|ref|YP_448065.1| - 0.073 12.8 1.2 0.11 12.1 0.8 1.3 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family KIP1 PF07765.7 gi|84489833|ref|YP_448065.1| - 0.16 11.8 0.8 0.21 11.4 0.5 1.3 1 0 0 1 1 1 0 KIP1-like protein DUF2746 PF10874.3 gi|84489833|ref|YP_448065.1| - 0.31 11.2 2.0 0.24 11.6 0.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2746) Transglut_core PF01841.14 gi|84489834|ref|YP_448066.1| - 2.2e-19 69.7 0.3 5.3e-19 68.4 0.2 1.7 1 0 0 1 1 1 1 Transglutaminase-like superfamily Big_1 PF02369.11 gi|84489834|ref|YP_448066.1| - 1.1e-05 25.2 4.1 1.1e-05 25.2 2.8 6.2 5 1 1 6 6 6 3 Bacterial Ig-like domain (group 1) Peptidase_C71 PF12386.3 gi|84489834|ref|YP_448066.1| - 2.7e-05 23.6 4.6 5.8e-05 22.5 1.1 3.0 2 0 0 2 2 2 1 Pseudomurein endo-isopeptidase Pei Kinesin-relat_1 PF12711.2 gi|84489834|ref|YP_448066.1| - 0.12 12.8 0.3 0.22 11.9 0.2 1.4 1 0 0 1 1 1 0 Kinesin motor Bin3 PF06859.7 gi|84489834|ref|YP_448066.1| - 0.2 11.6 0.1 0.2 11.6 0.1 2.0 2 0 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) AMP-binding_C_2 PF14535.1 gi|84489835|ref|YP_448067.1| - 1.3e-29 102.0 0.3 4.5e-29 100.3 0.2 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|84489835|ref|YP_448067.1| - 2.3e-18 65.7 0.6 7.8e-18 64.0 0.4 1.7 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|84489835|ref|YP_448067.1| - 6.6e-05 21.7 0.1 0.0011 17.7 0.0 2.1 2 0 0 2 2 2 1 Acyl-protein synthetase, LuxE ACT PF01842.20 gi|84489836|ref|YP_448068.1| - 2.7e-07 29.8 0.1 0.00039 19.8 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.1 gi|84489836|ref|YP_448068.1| - 0.00017 21.8 1.8 0.063 13.6 0.1 2.2 2 0 0 2 2 2 2 ACT domain POR PF01558.13 gi|84489837|ref|YP_448069.1| - 2.7e-36 125.0 0.0 3.2e-36 124.8 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|84489838|ref|YP_448070.1| - 4.2e-25 88.0 0.1 7.9e-25 87.2 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|84489838|ref|YP_448070.1| - 3.2e-13 49.7 0.0 4.9e-13 49.1 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4_2 PF12797.2 gi|84489838|ref|YP_448070.1| - 3.5e-08 32.9 12.0 7.9e-05 22.3 1.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|84489838|ref|YP_448070.1| - 8.5e-07 28.3 17.8 5.6e-05 22.5 3.0 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489838|ref|YP_448070.1| - 1.1e-05 25.0 14.3 0.00015 21.4 10.4 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489838|ref|YP_448070.1| - 1.6e-05 24.5 20.2 0.00059 19.6 3.0 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84489838|ref|YP_448070.1| - 0.00036 20.8 19.1 0.026 14.8 3.3 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84489838|ref|YP_448070.1| - 0.00048 19.9 15.9 0.0013 18.5 11.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489838|ref|YP_448070.1| - 0.0013 19.3 10.9 0.0055 17.4 2.6 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|84489838|ref|YP_448070.1| - 0.0033 17.6 14.7 0.0033 17.6 10.2 2.1 2 1 1 3 3 2 2 4Fe-4S dicluster domain Transketolase_C PF02780.15 gi|84489838|ref|YP_448070.1| - 0.0086 16.0 0.0 0.023 14.6 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4_8 PF13183.1 gi|84489838|ref|YP_448070.1| - 0.01 15.8 13.3 0.04 13.9 9.2 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489838|ref|YP_448070.1| - 0.072 13.4 22.7 0.033 14.4 3.4 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain TPP_enzyme_N PF02776.13 gi|84489838|ref|YP_448070.1| - 0.086 12.3 0.0 0.22 11.0 0.0 1.7 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_17 PF13534.1 gi|84489838|ref|YP_448070.1| - 0.66 10.3 15.9 0.44 10.9 1.6 2.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84489838|ref|YP_448070.1| - 1.6 9.2 15.0 1.9 8.9 1.6 2.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84489838|ref|YP_448070.1| - 2 9.1 21.8 0.09 13.3 4.4 3.3 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|84489838|ref|YP_448070.1| - 2.1 8.8 16.4 3.8 8.0 2.4 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489838|ref|YP_448070.1| - 9.3 6.9 13.5 3.3 8.3 1.0 2.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain CCG PF02754.11 gi|84489839|ref|YP_448071.1| - 9e-41 137.7 0.1 5e-22 77.6 0.0 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer2_3 PF13085.1 gi|84489839|ref|YP_448071.1| - 2.8e-31 107.5 0.5 2.8e-31 107.5 0.4 2.3 3 0 0 3 3 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 gi|84489839|ref|YP_448071.1| - 5.9e-12 45.4 4.1 5.9e-12 45.4 2.8 2.9 4 0 0 4 4 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84489839|ref|YP_448071.1| - 1.9e-08 34.5 4.1 1.9e-08 34.5 2.9 3.6 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489839|ref|YP_448071.1| - 3.9e-08 33.6 9.9 0.0014 19.0 0.1 4.7 5 0 0 5 5 5 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84489839|ref|YP_448071.1| - 3.9e-08 32.9 5.3 3.9e-08 32.9 3.7 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84489839|ref|YP_448071.1| - 4.1e-06 26.9 15.0 0.0014 18.8 0.1 4.4 5 0 0 5 5 4 2 4Fe-4S dicluster domain Fer2 PF00111.22 gi|84489839|ref|YP_448071.1| - 6.6e-06 25.7 0.1 6.6e-06 25.7 0.1 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_7 PF12838.2 gi|84489839|ref|YP_448071.1| - 0.00013 22.3 7.3 0.00013 22.3 5.1 3.8 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489839|ref|YP_448071.1| - 0.0038 17.9 9.4 0.18 12.5 0.1 3.8 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84489839|ref|YP_448071.1| - 0.0049 16.7 23.9 0.015 15.1 1.3 4.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|84489839|ref|YP_448071.1| - 0.0088 16.5 0.3 0.0088 16.5 0.2 3.1 2 1 1 3 3 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84489839|ref|YP_448071.1| - 0.019 15.3 12.3 0.22 11.9 0.2 3.7 4 0 0 4 4 3 0 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|84489839|ref|YP_448071.1| - 0.026 14.3 13.4 0.29 11.0 0.3 3.6 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84489839|ref|YP_448071.1| - 0.04 14.2 2.1 0.04 14.2 1.5 4.6 5 0 0 5 5 4 0 4Fe-4S binding domain Peptidase_C3 PF00548.15 gi|84489839|ref|YP_448071.1| - 0.043 13.6 0.0 0.11 12.2 0.0 1.7 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Fer4 PF00037.22 gi|84489839|ref|YP_448071.1| - 7.9 6.2 31.5 0.032 13.8 1.5 4.3 5 0 0 5 5 5 0 4Fe-4S binding domain YbjQ_1 PF01906.12 gi|84489840|ref|YP_448072.1| - 3.5e-35 120.5 1.2 3.9e-35 120.4 0.8 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF4156 PF13698.1 gi|84489840|ref|YP_448072.1| - 0.042 13.7 0.1 0.064 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) DUF308 PF03729.8 gi|84489841|ref|YP_448073.1| - 5.1e-09 35.9 45.6 9.4e-06 25.5 13.9 3.2 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) SpoU_methylase PF00588.14 gi|84489842|ref|YP_448074.1| - 9.7e-34 116.2 0.0 2.8e-33 114.7 0.0 1.6 2 0 0 2 2 2 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.4 gi|84489842|ref|YP_448074.1| - 0.00057 19.4 0.0 0.0079 15.7 0.0 2.2 1 1 0 1 1 1 1 SAM-dependent RNA methyltransferase DCD PF06559.6 gi|84489843|ref|YP_448075.1| - 4.1e-19 68.2 0.0 3.1e-11 42.2 0.0 2.1 1 1 0 2 2 2 2 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.14 gi|84489843|ref|YP_448075.1| - 3.7e-16 58.7 0.0 6.8e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 dUTPase tRNA-synt_2b PF00587.20 gi|84489844|ref|YP_448076.1| - 7.3e-61 204.7 0.4 1.2e-60 204.0 0.3 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|84489844|ref|YP_448076.1| - 2.3e-19 69.1 0.1 4.6e-19 68.1 0.1 1.5 1 0 0 1 1 1 1 Anticodon binding domain SWIRM PF04433.12 gi|84489844|ref|YP_448076.1| - 0.054 13.6 2.0 0.08 13.0 0.1 2.1 2 0 0 2 2 2 0 SWIRM domain DUF4480 PF13715.1 gi|84489844|ref|YP_448076.1| - 0.075 13.0 1.0 0.19 11.7 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4480) NifU_N PF01592.11 gi|84489844|ref|YP_448076.1| - 0.12 12.3 0.1 5.6 6.9 0.0 2.3 2 0 0 2 2 2 0 NifU-like N terminal domain DZR PF12773.2 gi|84489844|ref|YP_448076.1| - 0.14 12.0 0.1 1.8 8.4 0.0 2.1 2 0 0 2 2 2 0 Double zinc ribbon TatD_DNase PF01026.16 gi|84489845|ref|YP_448077.1| - 8.7e-26 90.6 0.6 1e-25 90.4 0.4 1.0 1 0 0 1 1 1 1 TatD related DNase Peptidase_M19 PF01244.16 gi|84489845|ref|YP_448077.1| - 0.024 13.5 0.0 0.037 12.9 0.0 1.4 1 0 0 1 1 1 0 Membrane dipeptidase (Peptidase family M19) zf-ribbon_3 PF13248.1 gi|84489846|ref|YP_448078.1| - 4.6e-05 22.4 1.1 9.4e-05 21.4 0.7 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489846|ref|YP_448078.1| - 0.0009 18.6 3.2 0.002 17.5 1.8 2.0 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|84489846|ref|YP_448078.1| - 0.0016 18.2 1.2 0.0031 17.3 0.8 1.4 1 0 0 1 1 1 1 Double zinc ribbon DUF2207 PF09972.4 gi|84489846|ref|YP_448078.1| - 0.0058 15.2 0.0 0.0069 15.0 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Ribosomal_L37e PF01907.14 gi|84489846|ref|YP_448078.1| - 0.015 15.0 1.5 0.025 14.3 1.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L37e OrfB_Zn_ribbon PF07282.6 gi|84489846|ref|YP_448078.1| - 0.016 14.8 1.2 0.027 14.1 0.9 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-ISL3 PF14690.1 gi|84489846|ref|YP_448078.1| - 0.035 14.1 2.2 1.3 9.1 0.2 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DNA_RNApol_7kD PF03604.8 gi|84489846|ref|YP_448078.1| - 0.07 12.6 0.9 3.1 7.3 0.0 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF2387 PF09526.5 gi|84489846|ref|YP_448078.1| - 0.11 12.3 4.1 0.42 10.5 2.8 1.8 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) A2L_zn_ribbon PF08792.5 gi|84489846|ref|YP_448078.1| - 0.12 11.9 2.8 3.1 7.3 0.2 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain UPF0547 PF10571.4 gi|84489846|ref|YP_448078.1| - 0.15 11.7 9.8 0.48 10.1 0.2 2.6 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_4 PF13717.1 gi|84489846|ref|YP_448078.1| - 0.2 11.3 2.2 7 6.4 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.7 gi|84489846|ref|YP_448078.1| - 0.27 11.0 3.7 0.64 9.8 0.0 2.7 3 0 0 3 3 3 0 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.7 gi|84489846|ref|YP_448078.1| - 0.29 10.4 5.5 0.75 9.1 3.5 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding RNA_POL_M_15KD PF02150.11 gi|84489846|ref|YP_448078.1| - 0.7 9.6 5.2 6.9 6.4 0.3 2.3 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit zinc_ribbon_5 PF13719.1 gi|84489846|ref|YP_448078.1| - 0.72 9.4 4.3 9 5.9 0.4 2.4 1 1 1 2 2 2 0 zinc-ribbon domain Rubredoxin PF00301.15 gi|84489846|ref|YP_448078.1| - 1.9 8.4 6.2 24 4.9 0.5 3.0 2 1 1 3 3 3 0 Rubredoxin DUF552 PF04472.7 gi|84489847|ref|YP_448079.1| - 0.053 13.4 1.0 0.072 13.0 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF552) DUF1690 PF07956.6 gi|84489847|ref|YP_448079.1| - 0.16 11.9 1.0 2 8.3 0.0 2.3 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) DUF1611 PF07755.6 gi|84489848|ref|YP_448080.1| - 8.5e-68 228.2 0.0 1e-67 227.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1611) SIS PF01380.17 gi|84489849|ref|YP_448081.1| - 9.2e-31 106.1 0.4 1.7e-22 79.4 0.2 2.2 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.1 gi|84489849|ref|YP_448081.1| - 0.0026 17.4 0.1 0.079 12.6 0.0 2.7 2 1 1 3 3 3 1 SIS domain TM2 PF05154.11 gi|84489850|ref|YP_448082.1| - 1.9e-07 31.1 5.2 1.9e-07 31.1 3.6 2.0 2 0 0 2 2 2 1 TM2 domain DZR PF12773.2 gi|84489850|ref|YP_448082.1| - 0.0037 17.0 1.7 0.0052 16.5 1.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|84489850|ref|YP_448082.1| - 0.0085 15.5 2.3 0.012 15.0 1.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|84489850|ref|YP_448082.1| - 0.019 14.3 1.1 0.034 13.4 0.8 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|84489850|ref|YP_448082.1| - 0.04 13.1 0.7 0.06 12.5 0.5 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF2116 PF09889.4 gi|84489850|ref|YP_448082.1| - 0.065 13.0 0.3 0.065 13.0 0.2 2.7 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2628 PF10947.3 gi|84489850|ref|YP_448082.1| - 0.31 10.8 7.5 0.39 10.5 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Phtf-FEM1B_bdg PF12129.3 gi|84489850|ref|YP_448082.1| - 2.8 7.2 9.0 8.4 5.7 6.2 1.7 1 1 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor FUSC_2 PF13515.1 gi|84489850|ref|YP_448082.1| - 6.6 6.6 11.1 0.3 10.9 2.7 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Bunya_G2 PF03563.8 gi|84489850|ref|YP_448082.1| - 8.9 5.0 8.0 6.6 5.5 4.9 1.3 1 1 0 1 1 1 0 Bunyavirus glycoprotein G2 DZR PF12773.2 gi|84489851|ref|YP_448083.1| - 0.0016 18.2 0.3 0.0024 17.6 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489851|ref|YP_448083.1| - 0.026 13.7 1.3 0.06 12.5 0.9 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489851|ref|YP_448083.1| - 0.09 12.2 3.8 0.19 11.2 2.6 1.6 1 0 0 1 1 1 0 zinc-ribbon domain CreD PF06123.7 gi|84489851|ref|YP_448083.1| - 0.35 9.3 2.7 0.45 8.9 1.9 1.2 1 0 0 1 1 1 0 Inner membrane protein CreD TM2 PF05154.11 gi|84489851|ref|YP_448083.1| - 0.57 10.4 10.5 2.1 8.6 7.3 1.9 1 1 0 1 1 1 0 TM2 domain zf-BED PF02892.10 gi|84489851|ref|YP_448083.1| - 7.4 6.4 7.3 9.5 6.0 0.2 2.5 1 1 1 2 2 2 0 BED zinc finger SfsA PF03749.8 gi|84489852|ref|YP_448084.1| - 8.5e-63 211.6 0.1 1e-62 211.4 0.0 1.0 1 0 0 1 1 1 1 Sugar fermentation stimulation protein DZR PF12773.2 gi|84489853|ref|YP_448085.1| - 3.1e-05 23.7 0.5 5.5e-05 22.9 0.3 1.5 1 0 0 1 1 1 1 Double zinc ribbon TM2 PF05154.11 gi|84489853|ref|YP_448085.1| - 0.00013 22.0 1.4 0.00017 21.7 0.9 1.2 1 0 0 1 1 1 1 TM2 domain zf-ribbon_3 PF13248.1 gi|84489853|ref|YP_448085.1| - 0.0004 19.5 2.2 0.00069 18.7 1.5 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489853|ref|YP_448085.1| - 0.0024 17.3 5.7 0.0067 15.8 4.0 1.8 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.13 gi|84489853|ref|YP_448085.1| - 0.59 9.2 4.6 1 8.5 3.2 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others SWIM PF04434.12 gi|84489854|ref|YP_448086.1| - 0.0011 18.3 0.8 0.002 17.5 0.5 1.3 1 0 0 1 1 1 1 SWIM zinc finger DUF2430 PF10353.4 gi|84489854|ref|YP_448086.1| - 0.01 15.9 0.4 0.013 15.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2430) zf-ribbon_3 PF13248.1 gi|84489855|ref|YP_448087.1| - 1.8e-05 23.8 0.3 0.063 12.4 0.0 2.1 2 0 0 2 2 2 2 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|84489855|ref|YP_448087.1| - 2.9e-05 24.2 0.4 3.7e-05 23.9 0.3 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.7 gi|84489855|ref|YP_448087.1| - 4e-05 22.8 2.0 0.12 11.6 0.3 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_4 PF13717.1 gi|84489855|ref|YP_448087.1| - 0.00014 21.5 0.4 0.0042 16.7 0.0 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|84489855|ref|YP_448087.1| - 0.00015 21.2 1.2 0.0029 17.1 0.0 2.3 2 0 0 2 2 2 1 zinc-ribbon domain Prim_Zn_Ribbon PF08273.7 gi|84489855|ref|YP_448087.1| - 0.00019 21.4 2.1 0.00027 20.9 1.4 1.2 1 0 0 1 1 1 1 Zinc-binding domain of primase-helicase Zn-ribbon_8 PF09723.5 gi|84489855|ref|YP_448087.1| - 0.0012 18.7 1.9 0.47 10.4 0.1 2.3 2 0 0 2 2 2 2 Zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84489855|ref|YP_448087.1| - 0.0038 16.8 2.9 0.03 13.9 1.9 2.0 1 1 0 1 1 1 1 Putative transposase DNA-binding domain zf-tcix PF14952.1 gi|84489855|ref|YP_448087.1| - 0.0099 15.1 1.5 0.56 9.5 0.1 2.2 2 0 0 2 2 2 1 Putative treble-clef, zinc-finger, Zn-binding TFIIS_C PF01096.13 gi|84489855|ref|YP_448087.1| - 0.016 14.8 2.3 2.6 7.7 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-ISL3 PF14690.1 gi|84489855|ref|YP_448087.1| - 0.016 15.1 1.0 1.1 9.3 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|84489855|ref|YP_448087.1| - 0.017 14.9 2.7 0.03 14.1 1.7 1.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84489855|ref|YP_448087.1| - 0.018 14.5 5.0 0.78 9.3 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|84489855|ref|YP_448087.1| - 0.019 14.6 6.5 0.24 11.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.1 gi|84489855|ref|YP_448087.1| - 0.019 14.6 0.7 4.8 6.9 0.0 2.2 2 0 0 2 2 2 0 Nudix N-terminal zf-C2HC5 PF06221.8 gi|84489855|ref|YP_448087.1| - 0.02 14.6 0.4 4.8 7.0 0.0 2.1 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type Ogr_Delta PF04606.7 gi|84489855|ref|YP_448087.1| - 0.023 14.3 4.0 0.46 10.1 2.8 2.2 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger DZR PF12773.2 gi|84489855|ref|YP_448087.1| - 0.025 14.3 2.1 0.055 13.2 1.5 1.6 1 1 0 1 1 1 0 Double zinc ribbon Trm112p PF03966.11 gi|84489855|ref|YP_448087.1| - 0.027 14.8 0.7 0.052 13.9 0.5 1.6 1 1 0 1 1 1 0 Trm112p-like protein zf-FPG_IleRS PF06827.9 gi|84489855|ref|YP_448087.1| - 0.031 13.9 1.1 5.7 6.6 0.2 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Terminase_GpA PF05876.7 gi|84489855|ref|YP_448087.1| - 0.038 12.3 0.3 0.041 12.2 0.2 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) DUF2387 PF09526.5 gi|84489855|ref|YP_448087.1| - 0.042 13.7 1.3 0.095 12.6 0.9 1.6 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Zn_ribbon_recom PF13408.1 gi|84489855|ref|YP_448087.1| - 0.044 14.0 0.2 1.3 9.3 0.0 2.2 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain YhfH PF14149.1 gi|84489855|ref|YP_448087.1| - 0.053 13.3 1.3 2.7 7.8 0.1 2.3 2 0 0 2 2 2 0 YhfH-like protein DNA_RNApol_7kD PF03604.8 gi|84489855|ref|YP_448087.1| - 0.065 12.7 1.6 2.2 7.8 0.1 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-TFIIB PF13453.1 gi|84489855|ref|YP_448087.1| - 0.091 11.9 0.7 0.54 9.4 0.5 2.0 1 1 0 1 1 1 0 Transcription factor zinc-finger zf-C2H2_4 PF13894.1 gi|84489855|ref|YP_448087.1| - 0.091 13.1 0.6 12 6.5 0.0 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger GCC2_GCC3 PF07699.8 gi|84489855|ref|YP_448087.1| - 0.092 12.3 3.1 0.48 10.0 0.1 2.1 1 1 1 2 2 2 0 GCC2 and GCC3 Ribosomal_S26e PF01283.14 gi|84489855|ref|YP_448087.1| - 0.12 12.6 0.2 0.19 11.9 0.0 1.5 1 1 1 2 2 2 0 Ribosomal protein S26e HypA PF01155.14 gi|84489855|ref|YP_448087.1| - 0.12 12.1 1.0 7.7 6.2 0.1 2.0 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF951 PF06107.6 gi|84489855|ref|YP_448087.1| - 0.13 11.8 0.8 0.21 11.1 0.5 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF951) Elf1 PF05129.8 gi|84489855|ref|YP_448087.1| - 0.15 11.7 1.0 0.23 11.1 0.5 1.6 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like DUF1451 PF07295.6 gi|84489855|ref|YP_448087.1| - 0.29 10.9 4.0 1.5 8.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1451) zf-NADH-PPase PF09297.6 gi|84489855|ref|YP_448087.1| - 0.32 10.5 2.3 5.8 6.5 0.1 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-C2H2 PF00096.21 gi|84489855|ref|YP_448087.1| - 0.35 11.2 3.2 6.3 7.3 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type PhnA_Zn_Ribbon PF08274.7 gi|84489855|ref|YP_448087.1| - 0.47 10.2 3.8 6.7 6.5 0.5 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon A2L_zn_ribbon PF08792.5 gi|84489855|ref|YP_448087.1| - 1.1 8.8 3.5 8.2 6.0 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Fer4 PF00037.22 gi|84489856|ref|YP_448088.1| - 5.7e-12 44.7 15.2 1.8e-10 39.9 2.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84489856|ref|YP_448088.1| - 6.8e-10 38.6 23.5 4.6e-06 26.3 2.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84489856|ref|YP_448088.1| - 8.9e-10 38.8 9.6 9.9e-10 38.6 6.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84489856|ref|YP_448088.1| - 2.5e-08 33.4 13.6 2.6e-08 33.3 1.4 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84489856|ref|YP_448088.1| - 1.3e-07 31.0 3.0 1.3e-07 31.0 2.1 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84489856|ref|YP_448088.1| - 5.3e-07 29.4 9.3 6e-07 29.2 6.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84489856|ref|YP_448088.1| - 6.3e-07 30.0 8.2 0.00064 20.4 1.8 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|84489856|ref|YP_448088.1| - 1.3e-06 28.5 11.0 2.2e-06 27.8 7.6 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84489856|ref|YP_448088.1| - 0.0001 22.2 10.0 0.00051 20.0 6.9 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84489856|ref|YP_448088.1| - 0.00045 20.7 1.5 0.00045 20.7 1.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|84489856|ref|YP_448088.1| - 0.00099 19.2 3.6 0.00099 19.2 2.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84489856|ref|YP_448088.1| - 0.0014 18.9 2.7 0.0014 18.9 1.8 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84489856|ref|YP_448088.1| - 0.0015 18.9 5.2 0.0015 18.9 3.6 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84489856|ref|YP_448088.1| - 0.0056 17.0 10.6 0.028 14.7 2.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|84489856|ref|YP_448088.1| - 0.0085 15.9 3.7 0.0097 15.7 2.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84489856|ref|YP_448088.1| - 0.017 15.5 3.2 0.017 15.5 2.2 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain HCV_NS2 PF01538.13 gi|84489856|ref|YP_448088.1| - 0.2 11.0 0.6 0.22 10.9 0.4 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Fer4_19 PF06902.6 gi|84489856|ref|YP_448088.1| - 1.2 9.0 4.9 0.48 10.2 1.4 1.8 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_20 PF14691.1 gi|84489856|ref|YP_448088.1| - 6.4 6.4 8.9 6 6.5 3.3 1.9 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FAD_binding_3 PF01494.14 gi|84489857|ref|YP_448089.1| - 1.8e-16 60.1 2.4 1.1e-14 54.3 1.6 2.8 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|84489857|ref|YP_448089.1| - 1.9e-12 46.7 1.0 2.8e-05 23.1 0.0 2.4 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|84489857|ref|YP_448089.1| - 1.1e-08 34.6 0.4 3.3e-08 33.0 0.3 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|84489857|ref|YP_448089.1| - 2.2e-08 33.1 0.0 1.5e-05 23.8 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.19 gi|84489857|ref|YP_448089.1| - 8.8e-07 28.1 0.3 2.4e-05 23.3 0.1 2.3 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.7 gi|84489857|ref|YP_448089.1| - 1.2e-06 27.6 0.0 2.6e-05 23.3 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.9 gi|84489857|ref|YP_448089.1| - 3.8e-06 25.6 0.6 1.1e-05 24.1 0.1 2.0 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|84489857|ref|YP_448089.1| - 8.1e-06 25.7 0.1 3.3e-05 23.8 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|84489857|ref|YP_448089.1| - 8.5e-05 22.5 6.2 0.00011 22.1 3.1 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|84489857|ref|YP_448089.1| - 0.00021 20.4 1.1 0.00068 18.8 0.0 2.3 2 1 1 3 3 3 1 Thi4 family Pyr_redox PF00070.22 gi|84489857|ref|YP_448089.1| - 0.00073 19.9 0.6 0.006 16.9 0.1 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|84489857|ref|YP_448089.1| - 0.0014 17.5 0.4 0.0014 17.5 0.2 2.1 2 1 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.1 gi|84489857|ref|YP_448089.1| - 0.0024 17.9 0.0 0.006 16.6 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|84489857|ref|YP_448089.1| - 0.032 13.8 0.2 0.093 12.3 0.0 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|84489857|ref|YP_448089.1| - 0.086 12.2 0.1 0.17 11.2 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA PUA PF01472.15 gi|84489858|ref|YP_448090.1| - 3.5e-13 49.0 0.1 6.1e-13 48.2 0.1 1.4 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.1 gi|84489858|ref|YP_448090.1| - 1.9e-08 34.0 0.0 3.9e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase DUF59 PF01883.14 gi|84489859|ref|YP_448091.1| - 1.2e-13 50.8 0.6 1.4e-13 50.5 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF59 Epimerase_2 PF02350.14 gi|84489860|ref|YP_448092.1| - 0.006 15.3 0.5 0.01 14.6 0.0 1.5 2 0 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_1 PF00534.15 gi|84489860|ref|YP_448092.1| - 0.019 14.3 0.1 0.041 13.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferases group 1 HupF_HypC PF01455.13 gi|84489861|ref|YP_448093.1| - 6.4e-24 83.7 0.1 7.3e-24 83.5 0.1 1.0 1 0 0 1 1 1 1 HupF/HypC family DUF2493 PF10686.4 gi|84489861|ref|YP_448093.1| - 0.066 12.7 0.0 0.078 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2493) ABC2_membrane_3 PF12698.2 gi|84489862|ref|YP_448094.1| - 2e-41 142.1 24.6 3.4e-41 141.4 17.0 1.4 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|84489862|ref|YP_448094.1| - 1.7e-05 24.0 19.8 1.7e-05 24.0 13.7 2.3 2 1 1 3 3 3 1 ABC-2 type transporter ACT PF01842.20 gi|84489863|ref|YP_448095.1| - 2.1e-06 27.0 0.3 7.3e-06 25.3 0.0 1.9 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.1 gi|84489863|ref|YP_448095.1| - 0.025 14.0 0.0 0.053 13.0 0.0 1.5 1 0 0 1 1 1 0 ACT domain ACT_4 PF13291.1 gi|84489863|ref|YP_448095.1| - 0.025 14.8 0.8 0.13 12.5 0.0 2.5 2 2 1 3 3 3 0 ACT domain NMT PF01233.14 gi|84489863|ref|YP_448095.1| - 0.044 13.4 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain DUF4496 PF14908.1 gi|84489863|ref|YP_448095.1| - 0.063 13.1 0.1 0.089 12.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4496) Chorismate_bind PF00425.13 gi|84489864|ref|YP_448096.1| - 1.1e-90 303.4 0.0 1.6e-90 302.9 0.0 1.2 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|84489864|ref|YP_448096.1| - 5.2e-23 81.6 1.7 6.2e-22 78.1 0.1 2.6 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region GATase PF00117.23 gi|84489865|ref|YP_448097.1| - 1.8e-48 164.5 0.0 2.1e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|84489865|ref|YP_448097.1| - 8e-11 41.7 0.0 1.5e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase C26 IGPS PF00218.16 gi|84489866|ref|YP_448098.1| - 3.5e-63 213.0 1.8 3.9e-63 212.8 1.3 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.14 gi|84489866|ref|YP_448098.1| - 6.5e-06 25.7 0.4 0.00022 20.7 0.1 2.3 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain His_biosynth PF00977.16 gi|84489866|ref|YP_448098.1| - 0.0002 20.6 0.0 0.00036 19.8 0.0 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.12 gi|84489866|ref|YP_448098.1| - 0.00022 20.5 0.1 0.00022 20.5 0.1 1.8 3 0 0 3 3 3 1 PcrB family NanE PF04131.9 gi|84489866|ref|YP_448098.1| - 0.0047 15.9 1.1 0.29 10.0 0.0 3.0 2 2 2 4 4 4 1 Putative N-acetylmannosamine-6-phosphate epimerase DUF561 PF04481.7 gi|84489866|ref|YP_448098.1| - 0.019 13.9 0.6 0.032 13.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF561) IMPDH PF00478.20 gi|84489866|ref|YP_448098.1| - 0.079 11.8 0.1 0.085 11.7 0.0 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Dus PF01207.12 gi|84489866|ref|YP_448098.1| - 0.1 11.3 0.0 0.19 10.5 0.0 1.4 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) PRAI PF00697.17 gi|84489867|ref|YP_448099.1| - 5e-22 78.4 0.0 6.4e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PALP PF00291.20 gi|84489868|ref|YP_448100.1| - 3.1e-42 144.8 0.1 4e-42 144.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF955 PF06114.8 gi|84489868|ref|YP_448100.1| - 0.026 14.2 0.1 5.2 6.8 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF955) Trp_syntA PF00290.15 gi|84489869|ref|YP_448101.1| - 4.6e-96 320.3 0.2 5.2e-96 320.1 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|84489869|ref|YP_448101.1| - 7.4e-11 41.7 0.2 6.7e-10 38.6 0.0 2.4 2 1 1 3 3 3 1 Histidine biosynthesis protein PcrB PF01884.12 gi|84489869|ref|YP_448101.1| - 4e-08 32.8 0.4 1.5e-05 24.3 0.0 2.5 2 1 0 2 2 2 2 PcrB family NMO PF03060.10 gi|84489869|ref|YP_448101.1| - 2.5e-06 26.8 0.0 6.1e-05 22.3 0.0 2.1 1 1 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.9 gi|84489869|ref|YP_448101.1| - 1.1e-05 24.5 0.2 4.5e-05 22.6 0.1 2.0 2 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.12 gi|84489869|ref|YP_448101.1| - 0.00075 18.6 0.1 0.0031 16.6 0.1 1.9 1 1 1 2 2 2 1 Thiamine monophosphate synthase/TENI NanE PF04131.9 gi|84489869|ref|YP_448101.1| - 0.0012 17.8 0.1 0.006 15.5 0.1 2.1 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.16 gi|84489869|ref|YP_448101.1| - 0.0037 16.3 0.0 0.012 14.6 0.0 1.7 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.13 gi|84489869|ref|YP_448101.1| - 0.0068 15.2 0.0 0.011 14.6 0.0 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase DUF561 PF04481.7 gi|84489869|ref|YP_448101.1| - 0.033 13.1 0.4 0.23 10.3 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF561) DUF4120 PF13496.1 gi|84489869|ref|YP_448101.1| - 0.036 14.0 0.0 0.32 11.0 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4120) Dus PF01207.12 gi|84489869|ref|YP_448101.1| - 0.045 12.5 0.0 0.27 10.0 0.0 2.0 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) Glycos_transf_3 PF00591.16 gi|84489870|ref|YP_448102.1| - 3e-83 279.1 0.0 4e-83 278.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|84489870|ref|YP_448102.1| - 8.5e-21 73.3 0.0 1.5e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Pyr_redox_2 PF07992.9 gi|84489871|ref|YP_448103.1| - 6.5e-34 117.5 2.2 8.3e-34 117.2 1.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|84489871|ref|YP_448103.1| - 7.2e-13 48.7 8.0 6e-09 36.1 0.1 3.6 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|84489871|ref|YP_448103.1| - 5.6e-11 42.8 0.0 1.4e-10 41.6 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|84489871|ref|YP_448103.1| - 4e-06 25.5 0.9 4e-06 25.5 0.6 2.5 3 1 2 5 5 5 1 HI0933-like protein FAD_oxidored PF12831.2 gi|84489871|ref|YP_448103.1| - 1.7e-05 24.0 0.0 2.4e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase K_oxygenase PF13434.1 gi|84489871|ref|YP_448103.1| - 2.8e-05 23.2 0.0 5.1e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.19 gi|84489871|ref|YP_448103.1| - 0.00017 20.6 0.1 0.0028 16.5 0.0 2.4 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.19 gi|84489871|ref|YP_448103.1| - 0.00027 19.9 0.0 0.0011 18.0 0.0 2.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|84489871|ref|YP_448103.1| - 0.00062 18.7 2.0 0.00062 18.7 1.4 3.7 2 2 2 4 4 4 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.16 gi|84489871|ref|YP_448103.1| - 0.00095 18.7 0.0 1.1 8.8 0.0 2.4 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain XdhC_C PF13478.1 gi|84489871|ref|YP_448103.1| - 0.0011 19.2 0.0 0.97 9.7 0.0 2.3 2 0 0 2 2 2 2 XdhC Rossmann domain NAD_binding_8 PF13450.1 gi|84489871|ref|YP_448103.1| - 0.0034 17.3 0.9 0.0065 16.4 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.1 gi|84489871|ref|YP_448103.1| - 0.0057 16.8 5.5 0.057 13.6 0.1 3.0 2 1 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_3 PF01494.14 gi|84489871|ref|YP_448103.1| - 0.015 14.3 0.2 0.045 12.8 0.0 1.8 2 0 0 2 2 2 0 FAD binding domain Trp_halogenase PF04820.9 gi|84489871|ref|YP_448103.1| - 0.035 12.7 2.4 0.039 12.5 0.1 2.1 3 0 0 3 3 3 0 Tryptophan halogenase CYTL1 PF15153.1 gi|84489871|ref|YP_448103.1| - 0.11 12.2 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 Cytokine-like protein 1 3HCDH_N PF02737.13 gi|84489871|ref|YP_448103.1| - 0.36 10.4 4.0 5.7 6.5 0.4 2.4 2 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.1 gi|84489871|ref|YP_448103.1| - 0.41 10.4 1.3 8 6.2 0.0 2.6 3 0 0 3 3 3 0 FAD-NAD(P)-binding Glyco_trans_1_4 PF13692.1 gi|84489872|ref|YP_448104.1| - 3.7e-05 23.8 0.0 6.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|84489872|ref|YP_448104.1| - 0.00091 18.6 0.1 0.0016 17.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 gi|84489872|ref|YP_448104.1| - 0.03 13.1 0.0 0.046 12.4 0.0 1.3 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Fe-ADH PF00465.14 gi|84489872|ref|YP_448104.1| - 0.17 10.4 0.7 0.49 8.9 0.5 1.7 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase Fer4_15 PF13459.1 gi|84489873|ref|YP_448105.1| - 3.4e-14 53.1 7.8 3.8e-14 52.9 5.4 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84489873|ref|YP_448105.1| - 2.1e-07 31.2 5.0 2.9e-07 30.7 3.5 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_19 PF06902.6 gi|84489873|ref|YP_448105.1| - 0.0096 15.7 1.2 0.045 13.5 0.8 1.9 1 1 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4 PF00037.22 gi|84489873|ref|YP_448105.1| - 0.015 14.9 1.4 0.015 14.9 1.0 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Stig1 PF04885.8 gi|84489873|ref|YP_448105.1| - 0.075 13.2 1.7 0.35 11.0 0.1 2.0 2 0 0 2 2 2 0 Stigma-specific protein, Stig1 DUF2116 PF09889.4 gi|84489873|ref|YP_448105.1| - 0.2 11.4 3.0 2.5 7.9 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Toxin_21 PF08091.6 gi|84489873|ref|YP_448105.1| - 1.6 8.5 6.2 0.19 11.4 0.8 1.8 2 0 0 2 2 2 0 Spider insecticidal peptide Fer4_10 PF13237.1 gi|84489873|ref|YP_448105.1| - 4.5 7.1 7.6 12 5.7 5.2 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain eRF1_1 PF03463.10 gi|84489875|ref|YP_448107.1| - 6.2e-31 106.7 0.3 1.3e-30 105.6 0.2 1.6 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 gi|84489875|ref|YP_448107.1| - 7.4e-23 80.9 0.7 3e-22 78.9 0.2 2.3 2 1 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|84489875|ref|YP_448107.1| - 1.6e-21 77.0 0.2 4e-21 75.7 0.1 1.7 1 0 0 1 1 1 1 eRF1 domain 2 Endonuclease_NS PF01223.18 gi|84489875|ref|YP_448107.1| - 0.065 12.8 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease PDH PF02153.12 gi|84489877|ref|YP_448109.1| - 3.9e-54 183.2 0.1 5.3e-54 182.8 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.12 gi|84489877|ref|YP_448109.1| - 1.1e-10 41.8 0.0 3e-10 40.3 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|84489877|ref|YP_448109.1| - 2.5e-06 27.4 0.0 1.8e-05 24.6 0.0 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|84489877|ref|YP_448109.1| - 8.6e-06 25.5 0.0 1.8e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.7 gi|84489877|ref|YP_448109.1| - 0.0004 19.8 0.1 0.0017 17.7 0.0 2.0 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain FDX-ACB PF03147.9 gi|84489877|ref|YP_448109.1| - 0.00063 19.8 0.0 0.0056 16.8 0.0 2.5 2 0 0 2 2 2 1 Ferredoxin-fold anticodon binding domain Semialdhyde_dh PF01118.19 gi|84489877|ref|YP_448109.1| - 0.012 15.8 0.0 0.031 14.5 0.0 1.7 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|84489877|ref|YP_448109.1| - 0.045 13.7 0.0 0.095 12.7 0.0 1.5 1 0 0 1 1 1 0 NADH(P)-binding AAA PF00004.24 gi|84489878|ref|YP_448110.1| - 5.4e-100 330.7 0.0 1.1e-49 167.9 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|84489878|ref|YP_448110.1| - 1.9e-26 91.8 0.1 2.1e-25 88.5 0.1 2.6 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|84489878|ref|YP_448110.1| - 1.3e-17 64.2 0.0 3.4e-09 36.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) CDC48_2 PF02933.12 gi|84489878|ref|YP_448110.1| - 1.3e-16 59.9 0.4 4.2e-16 58.3 0.3 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.1 gi|84489878|ref|YP_448110.1| - 2.5e-15 56.9 0.1 4e-08 33.4 0.0 3.3 2 1 1 3 3 3 2 AAA ATPase domain RuvB_N PF05496.7 gi|84489878|ref|YP_448110.1| - 3.9e-15 55.5 0.2 4.9e-08 32.3 0.0 2.8 2 2 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_17 PF13207.1 gi|84489878|ref|YP_448110.1| - 4.9e-14 53.1 0.2 1e-06 29.5 0.0 3.5 3 1 0 3 3 2 2 AAA domain AAA_22 PF13401.1 gi|84489878|ref|YP_448110.1| - 1.4e-13 51.0 0.2 4.4e-05 23.6 0.0 4.3 2 2 0 2 2 2 2 AAA domain AAA_14 PF13173.1 gi|84489878|ref|YP_448110.1| - 3e-12 46.5 0.0 7.5e-05 22.6 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.1 gi|84489878|ref|YP_448110.1| - 1.6e-11 44.2 0.0 9.5e-06 25.5 0.0 2.7 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.8 gi|84489878|ref|YP_448110.1| - 2e-11 43.2 0.2 4.3e-05 22.3 0.0 3.0 3 0 0 3 3 3 2 TIP49 C-terminus Zeta_toxin PF06414.7 gi|84489878|ref|YP_448110.1| - 8.3e-11 41.3 0.0 5.9e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_19 PF13245.1 gi|84489878|ref|YP_448110.1| - 1.3e-10 40.8 0.3 0.0005 19.7 0.0 2.7 2 0 0 2 2 2 2 Part of AAA domain AAA_5 PF07728.9 gi|84489878|ref|YP_448110.1| - 1.8e-10 40.6 1.4 5.1e-05 23.0 0.0 4.1 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|84489878|ref|YP_448110.1| - 2.8e-08 34.1 0.4 0.013 15.7 0.0 3.1 3 0 0 3 3 2 2 AAA domain IstB_IS21 PF01695.12 gi|84489878|ref|YP_448110.1| - 3.1e-07 29.9 0.8 0.0088 15.4 0.1 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_3 PF07726.6 gi|84489878|ref|YP_448110.1| - 3.4e-07 29.9 0.0 0.024 14.2 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.1 gi|84489878|ref|YP_448110.1| - 3.6e-07 30.3 0.0 0.0096 15.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|84489878|ref|YP_448110.1| - 4.1e-07 29.6 0.2 0.031 13.7 0.0 3.5 3 1 0 3 3 3 2 Sigma-54 interaction domain KaiC PF06745.8 gi|84489878|ref|YP_448110.1| - 5.6e-07 28.9 1.0 0.048 12.7 0.0 4.0 3 1 1 4 4 4 2 KaiC DUF815 PF05673.8 gi|84489878|ref|YP_448110.1| - 1.5e-06 27.3 0.0 0.043 12.7 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) DUF2075 PF09848.4 gi|84489878|ref|YP_448110.1| - 2.5e-06 26.7 0.0 0.036 13.0 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Mg_chelatase PF01078.16 gi|84489878|ref|YP_448110.1| - 5e-06 25.8 0.6 0.045 12.8 0.1 2.7 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|84489878|ref|YP_448110.1| - 7.6e-06 26.0 0.0 0.038 14.1 0.0 3.4 3 1 0 3 3 3 1 RNA helicase ABC_tran PF00005.22 gi|84489878|ref|YP_448110.1| - 9.8e-06 25.9 0.0 0.19 12.0 0.0 2.7 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.7 gi|84489878|ref|YP_448110.1| - 1.3e-05 24.9 0.7 0.26 10.9 0.0 3.7 4 0 0 4 4 4 2 NACHT domain Sigma54_activ_2 PF14532.1 gi|84489878|ref|YP_448110.1| - 1.4e-05 25.2 0.0 0.12 12.4 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Viral_helicase1 PF01443.13 gi|84489878|ref|YP_448110.1| - 1.7e-05 24.4 0.0 0.0069 15.9 0.0 2.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.1 gi|84489878|ref|YP_448110.1| - 2.5e-05 23.7 8.3 1.5 8.2 0.0 4.4 2 2 0 4 4 4 2 AAA domain NB-ARC PF00931.17 gi|84489878|ref|YP_448110.1| - 3.9e-05 22.6 0.1 0.079 11.8 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain PhoH PF02562.11 gi|84489878|ref|YP_448110.1| - 4.6e-05 22.7 2.1 0.11 11.6 0.0 3.4 3 1 0 3 3 3 2 PhoH-like protein NTPase_1 PF03266.10 gi|84489878|ref|YP_448110.1| - 8.2e-05 22.3 1.7 0.24 11.1 0.1 3.9 2 2 2 4 4 4 2 NTPase ResIII PF04851.10 gi|84489878|ref|YP_448110.1| - 0.0001 22.1 0.0 0.18 11.6 0.0 2.5 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit T2SE PF00437.15 gi|84489878|ref|YP_448110.1| - 0.00028 19.8 0.0 0.21 10.4 0.1 2.8 2 1 0 2 2 2 1 Type II/IV secretion system protein Bac_DnaA PF00308.13 gi|84489878|ref|YP_448110.1| - 0.00038 20.1 0.0 0.024 14.2 0.0 2.8 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_30 PF13604.1 gi|84489878|ref|YP_448110.1| - 0.00043 19.9 0.2 0.77 9.3 0.1 2.8 2 1 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.20 gi|84489878|ref|YP_448110.1| - 0.0016 18.0 0.0 0.79 9.1 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain UPF0079 PF02367.12 gi|84489878|ref|YP_448110.1| - 0.0018 17.9 0.0 1.4 8.5 0.0 2.7 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Parvo_NS1 PF01057.12 gi|84489878|ref|YP_448110.1| - 0.0019 17.1 0.1 0.8 8.5 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 SKI PF01202.17 gi|84489878|ref|YP_448110.1| - 0.0044 16.9 0.0 3.5 7.4 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase DAP3 PF10236.4 gi|84489878|ref|YP_448110.1| - 0.0045 15.9 0.0 0.44 9.4 0.0 2.4 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 AAA_11 PF13086.1 gi|84489878|ref|YP_448110.1| - 0.005 16.4 0.0 0.34 10.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain CPT PF07931.7 gi|84489878|ref|YP_448110.1| - 0.0065 16.1 0.3 7.1 6.2 0.0 3.2 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_24 PF13479.1 gi|84489878|ref|YP_448110.1| - 0.009 15.6 0.1 1.3 8.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain cobW PF02492.14 gi|84489878|ref|YP_448110.1| - 0.016 14.6 0.6 5.5 6.3 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain KTI12 PF08433.5 gi|84489878|ref|YP_448110.1| - 0.019 14.1 0.0 3 6.9 0.0 2.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Torsin PF06309.6 gi|84489878|ref|YP_448110.1| - 0.047 13.5 0.0 3 7.7 0.0 2.5 2 0 0 2 2 2 0 Torsin Cytidylate_kin2 PF13189.1 gi|84489878|ref|YP_448110.1| - 0.047 13.5 0.0 5.4 6.8 0.0 2.9 3 0 0 3 3 3 0 Cytidylate kinase-like family AdoHcyase PF05221.12 gi|84489879|ref|YP_448111.1| - 3.4e-58 196.7 0.0 4.2e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|84489879|ref|YP_448111.1| - 3.3e-51 173.3 2.8 4.4e-51 172.9 1.0 1.9 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|84489879|ref|YP_448111.1| - 1.1e-11 44.2 0.2 2e-11 43.3 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|84489879|ref|YP_448111.1| - 1.8e-07 30.6 0.1 3.1e-07 29.8 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 gi|84489879|ref|YP_448111.1| - 0.0006 19.7 0.2 0.0021 18.0 0.2 2.0 1 1 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.16 gi|84489879|ref|YP_448111.1| - 0.0012 18.4 0.4 0.0042 16.6 0.1 1.9 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_10 PF13460.1 gi|84489879|ref|YP_448111.1| - 0.0051 16.8 0.1 0.0098 15.9 0.1 1.4 1 0 0 1 1 1 1 NADH(P)-binding F420_oxidored PF03807.12 gi|84489879|ref|YP_448111.1| - 0.0057 17.0 0.1 0.015 15.7 0.1 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.14 gi|84489879|ref|YP_448111.1| - 0.02 13.9 0.3 0.053 12.5 0.2 1.7 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain zf-RNPHF PF08080.7 gi|84489879|ref|YP_448111.1| - 0.16 11.5 0.7 0.33 10.4 0.5 1.5 1 0 0 1 1 1 0 RNPHF zinc finger XPG_I PF00867.13 gi|84489880|ref|YP_448112.1| - 1.2e-28 98.9 0.1 4.1e-28 97.2 0.0 1.9 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.12 gi|84489880|ref|YP_448112.1| - 2.6e-19 69.3 0.0 7.8e-19 67.8 0.0 1.8 2 0 0 2 2 2 1 XPG N-terminal domain 5_3_exonuc PF01367.15 gi|84489880|ref|YP_448112.1| - 1.4e-08 34.8 0.0 6e-08 32.8 0.0 2.1 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold Imm22 PF15592.1 gi|84489880|ref|YP_448112.1| - 0.09 13.0 0.1 0.35 11.1 0.0 1.9 2 0 0 2 2 2 0 Immunity protein 22 Glycos_transf_2 PF00535.21 gi|84489881|ref|YP_448113.1| - 9.6e-30 103.4 1.9 2.1e-28 99.1 1.3 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84489881|ref|YP_448113.1| - 1.5e-11 44.5 0.0 4.3e-11 43.0 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|84489881|ref|YP_448113.1| - 7.2e-06 25.8 0.0 1.6e-05 24.6 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|84489881|ref|YP_448113.1| - 0.0068 16.6 0.3 0.035 14.4 0.1 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 Epimerase PF01370.16 gi|84489882|ref|YP_448114.1| - 3e-54 183.9 0.0 3.8e-54 183.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|84489882|ref|YP_448114.1| - 4.3e-14 52.0 0.0 6.3e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|84489882|ref|YP_448114.1| - 2.1e-13 49.6 0.0 3.3e-11 42.3 0.0 2.0 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|84489882|ref|YP_448114.1| - 7e-12 44.8 0.1 2.6e-10 39.6 0.1 2.9 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Epimerase_Csub PF13950.1 gi|84489882|ref|YP_448114.1| - 8.2e-12 44.8 0.1 1.5e-11 44.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit NAD_binding_4 PF07993.7 gi|84489882|ref|YP_448114.1| - 9.5e-08 31.2 0.0 2e-07 30.2 0.0 1.5 2 0 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.1 gi|84489882|ref|YP_448114.1| - 2.5e-05 24.3 0.0 4.8e-05 23.4 0.0 1.6 2 1 0 2 2 2 1 NADH(P)-binding NmrA PF05368.8 gi|84489882|ref|YP_448114.1| - 0.00017 20.9 0.2 0.0029 16.9 0.1 2.6 2 1 0 2 2 2 1 NmrA-like family adh_short PF00106.20 gi|84489882|ref|YP_448114.1| - 0.00086 19.2 0.0 0.0018 18.2 0.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|84489882|ref|YP_448114.1| - 0.0046 16.6 0.0 0.026 14.1 0.0 2.0 1 1 0 1 1 1 1 KR domain DAO PF01266.19 gi|84489882|ref|YP_448114.1| - 0.028 13.3 0.0 0.038 12.9 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase SNase PF00565.12 gi|84489883|ref|YP_448115.1| - 1.6e-13 50.8 0.0 2.2e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Staphylococcal nuclease homologue PadR PF03551.9 gi|84489884|ref|YP_448116.1| - 0.015 15.0 1.6 3 7.6 0.1 2.7 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|84489884|ref|YP_448116.1| - 0.016 14.8 1.4 4 7.2 0.1 2.7 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB P53_tetramer PF07710.6 gi|84489884|ref|YP_448116.1| - 0.087 11.9 0.8 5.1 6.2 0.1 2.5 2 0 0 2 2 2 0 P53 tetramerisation motif Penicillinase_R PF03965.11 gi|84489884|ref|YP_448116.1| - 0.13 12.3 0.5 0.32 11.0 0.0 1.8 1 1 0 2 2 2 0 Penicillinase repressor Tricorn_PDZ PF14685.1 gi|84489885|ref|YP_448117.1| - 0.0031 17.2 4.3 0.36 10.6 0.0 4.1 4 0 0 4 4 4 2 Tricorn protease PDZ domain NurA PF09376.5 gi|84489886|ref|YP_448118.1| - 8.2e-41 140.1 3.9 1.1e-40 139.6 2.7 1.2 1 0 0 1 1 1 1 NurA domain DnaI_N PF07319.6 gi|84489886|ref|YP_448118.1| - 0.04 14.1 2.0 0.14 12.4 1.4 1.9 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus DUF87 PF01935.12 gi|84489887|ref|YP_448119.1| - 2.4e-49 168.2 3.4 2.4e-49 168.2 2.4 1.6 2 0 0 2 2 2 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|84489887|ref|YP_448119.1| - 4.4e-19 69.0 0.3 4.3e-17 62.4 0.2 2.1 1 1 0 1 1 1 1 AAA-like domain HAS-barrel PF09378.5 gi|84489887|ref|YP_448119.1| - 1.2e-10 41.1 0.8 6.1e-10 38.8 0.6 2.3 1 0 0 1 1 1 1 HAS barrel domain DUF853 PF05872.7 gi|84489887|ref|YP_448119.1| - 4.6e-09 35.1 0.0 2.6e-07 29.4 0.0 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.4 gi|84489887|ref|YP_448119.1| - 2.8e-05 22.9 0.0 9.7e-05 21.1 0.0 1.7 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain T4SS-DNA_transf PF02534.9 gi|84489887|ref|YP_448119.1| - 0.00037 19.2 0.0 0.00094 17.8 0.0 1.6 1 1 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer FtsK_SpoIIIE PF01580.13 gi|84489887|ref|YP_448119.1| - 0.00042 19.8 0.0 0.22 10.9 0.0 3.0 3 0 0 3 3 3 1 FtsK/SpoIIIE family DEAD PF00270.24 gi|84489887|ref|YP_448119.1| - 0.022 14.2 0.1 4.3 6.8 0.0 2.4 1 1 0 2 2 2 0 DEAD/DEAH box helicase Zot PF05707.7 gi|84489887|ref|YP_448119.1| - 0.029 13.8 0.0 0.21 11.0 0.0 2.3 2 1 1 3 3 3 0 Zonular occludens toxin (Zot) ABC_tran PF00005.22 gi|84489887|ref|YP_448119.1| - 0.062 13.6 0.2 0.19 12.0 0.0 2.0 2 0 0 2 2 2 0 ABC transporter Metallophos_2 PF12850.2 gi|84489888|ref|YP_448120.1| - 7.8e-19 68.0 0.1 1.4e-18 67.2 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84489888|ref|YP_448120.1| - 2.2e-18 66.3 4.9 4.1e-18 65.5 3.4 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase SbcD_C PF12320.3 gi|84489888|ref|YP_448120.1| - 0.0032 17.4 2.9 0.006 16.5 2.0 1.4 1 0 0 1 1 1 1 Type 5 capsule protein repressor C-terminal domain AAA_23 PF13476.1 gi|84489889|ref|YP_448121.1| - 1e-17 65.1 40.5 1e-17 65.1 28.1 6.7 1 1 2 3 3 3 1 AAA domain SMC_N PF02463.14 gi|84489889|ref|YP_448121.1| - 1.4e-12 47.3 3.2 1.4e-12 47.3 2.2 3.6 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|84489889|ref|YP_448121.1| - 4.3e-09 36.1 0.1 1.5e-08 34.4 0.0 1.9 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.1 gi|84489889|ref|YP_448121.1| - 8.6e-09 35.7 24.2 9.3e-06 25.8 7.0 5.1 1 1 4 5 5 5 2 AAA domain AAA_29 PF13555.1 gi|84489889|ref|YP_448121.1| - 3e-06 26.6 0.0 5.8e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|84489889|ref|YP_448121.1| - 0.00012 22.4 0.3 0.00012 22.4 0.2 6.2 1 1 1 3 3 3 2 ABC transporter Rad50_zn_hook PF04423.9 gi|84489889|ref|YP_448121.1| - 0.00061 19.2 3.5 0.00061 19.2 2.4 10.2 9 3 1 11 11 11 1 Rad50 zinc hook motif HAD PF12710.2 gi|84489890|ref|YP_448122.1| - 4e-13 49.9 0.6 4e-13 49.9 0.4 2.0 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|84489890|ref|YP_448122.1| - 1.9e-11 44.0 0.5 1.9e-11 44.0 0.3 5.0 2 1 2 4 4 4 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|84489890|ref|YP_448122.1| - 1.1e-10 41.9 1.8 2.9e-10 40.6 0.0 2.6 3 1 0 3 3 3 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|84489890|ref|YP_448122.1| - 1.1e-08 35.7 0.6 1.1e-08 35.7 0.4 3.6 2 2 2 4 4 4 2 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|84489890|ref|YP_448122.1| - 6.2e-05 22.2 0.3 6.2e-05 22.2 0.2 2.9 3 0 0 3 3 3 1 Putative Phosphatase DUF668 PF05003.7 gi|84489890|ref|YP_448122.1| - 2.7 8.2 6.4 1.9 8.7 1.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF668) TBP PF00352.16 gi|84489891|ref|YP_448123.1| - 4.8e-63 208.5 0.1 7.7e-32 108.5 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|84489891|ref|YP_448123.1| - 4.5e-05 23.4 0.0 0.52 10.4 0.0 2.8 3 0 0 3 3 3 2 Domain of unknown function (DUF3378) DUF3006 PF11213.3 gi|84489891|ref|YP_448123.1| - 0.098 12.4 0.2 0.54 10.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3006) CENP-F_C_Rb_bdg PF10490.4 gi|84489891|ref|YP_448123.1| - 0.17 11.1 0.4 0.4 10.0 0.0 1.7 2 0 0 2 2 2 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 CYTH PF01928.16 gi|84489892|ref|YP_448124.1| - 4e-34 117.9 4.3 4.4e-34 117.7 3.0 1.0 1 0 0 1 1 1 1 CYTH domain UBA_3 PF09288.5 gi|84489892|ref|YP_448124.1| - 0.025 14.1 0.8 10 5.8 0.1 3.0 1 1 2 3 3 3 0 Fungal ubiquitin-associated domain HMGL-like PF00682.14 gi|84489893|ref|YP_448125.1| - 3e-45 154.7 0.1 4.1e-45 154.2 0.1 1.2 1 0 0 1 1 1 1 HMGL-like DUF3216 PF11505.3 gi|84489893|ref|YP_448125.1| - 0.15 11.8 1.6 0.21 11.3 0.1 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3216) Aconitase PF00330.15 gi|84489894|ref|YP_448126.1| - 1.3e-78 264.5 5.2 9.4e-52 176.0 1.2 2.3 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|84489894|ref|YP_448126.1| - 0.037 12.5 0.0 0.053 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF521) NTP_transferase PF00483.18 gi|84489895|ref|YP_448127.1| - 6.6e-27 94.3 0.0 8.7e-27 93.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|84489895|ref|YP_448127.1| - 1.1e-10 41.7 0.0 3.5e-10 40.1 0.0 1.7 2 1 0 2 2 2 1 MobA-like NTP transferase domain IspD PF01128.14 gi|84489895|ref|YP_448127.1| - 0.0036 16.8 0.0 0.015 14.8 0.0 1.9 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Smr PF01713.16 gi|84489895|ref|YP_448127.1| - 0.015 15.4 0.0 0.038 14.1 0.0 1.7 1 0 0 1 1 1 0 Smr domain Glycos_transf_2 PF00535.21 gi|84489895|ref|YP_448127.1| - 0.048 13.3 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 CTP_transf_3 PF02348.14 gi|84489895|ref|YP_448127.1| - 0.066 12.8 0.0 0.15 11.6 0.0 1.5 1 1 0 1 1 1 0 Cytidylyltransferase NTP_transferase PF00483.18 gi|84489896|ref|YP_448128.1| - 6e-59 199.3 0.0 7.4e-59 199.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|84489896|ref|YP_448128.1| - 6e-10 39.4 0.0 8.3e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.19 gi|84489896|ref|YP_448128.1| - 9.3e-10 37.5 16.0 2.2e-06 26.8 1.3 5.0 3 1 3 6 6 6 3 Bacterial transferase hexapeptide (six repeats) IspD PF01128.14 gi|84489896|ref|YP_448128.1| - 0.083 12.3 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.1 gi|84489896|ref|YP_448128.1| - 0.91 9.1 16.0 0.049 13.1 2.6 4.5 5 1 0 5 5 5 0 Hexapeptide repeat of succinyl-transferase TPR_17 PF13431.1 gi|84489897|ref|YP_448129.1| - 0.12 12.6 1.0 7.6 7.0 0.0 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat YtkA PF13115.1 gi|84489897|ref|YP_448129.1| - 1.8 8.9 5.3 0.44 10.9 0.5 2.4 2 0 0 2 2 2 0 YtkA-like DUF2162 PF09930.4 gi|84489899|ref|YP_448131.1| - 4.5e-71 238.5 27.4 5.3e-71 238.3 19.0 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) MotA_ExbB PF01618.11 gi|84489900|ref|YP_448132.1| - 2.8e-05 23.7 0.0 4.2e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF2149 PF09919.4 gi|84489901|ref|YP_448133.1| - 8.3e-25 86.7 0.4 9.6e-25 86.5 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) ExbD PF02472.11 gi|84489901|ref|YP_448133.1| - 0.0071 16.3 0.2 0.0081 16.1 0.1 1.2 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR DUF1441 PF07278.6 gi|84489901|ref|YP_448133.1| - 0.021 14.4 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) Beta_helix PF13229.1 gi|84489902|ref|YP_448134.1| - 4.3e-26 91.5 112.9 3.8e-13 49.4 17.6 11.4 4 3 5 10 10 10 6 Right handed beta helix region NosD PF05048.8 gi|84489902|ref|YP_448134.1| - 1.2e-11 44.2 100.0 8.8e-08 31.5 22.8 11.4 3 3 5 10 10 10 6 Periplasmic copper-binding protein (NosD) A2M_N PF01835.14 gi|84489902|ref|YP_448134.1| - 2e-11 44.0 9.2 0.12 12.6 0.0 7.4 6 0 0 6 6 6 4 MG2 domain Beta_helix PF13229.1 gi|84489903|ref|YP_448135.1| - 0.0038 17.0 28.6 0.0038 17.0 19.8 6.2 1 1 3 5 5 5 2 Right handed beta helix region CobN-Mg_chel PF02514.11 gi|84489904|ref|YP_448136.1| - 2.7e-185 617.8 13.6 2.7e-185 617.8 9.4 3.2 2 1 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.1 gi|84489904|ref|YP_448136.1| - 1e-08 35.1 0.8 1.2e-07 31.6 0.5 3.0 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Cna_B PF05738.8 gi|84489904|ref|YP_448136.1| - 1.4e-06 27.9 1.3 1.4e-06 27.9 0.9 3.5 3 0 0 3 3 3 1 Cna protein B-type domain ECF-ribofla_trS PF07155.7 gi|84489905|ref|YP_448137.1| - 1.1e-11 44.7 25.0 1.1e-11 44.7 17.3 1.7 1 1 0 1 1 1 1 ECF-type riboflavin transporter, S component DUF3816 PF12822.2 gi|84489905|ref|YP_448137.1| - 5.1e-06 26.4 31.4 5.1e-06 26.4 21.8 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF3816) MerC PF03203.9 gi|84489905|ref|YP_448137.1| - 2.9 8.2 16.6 5.6 7.3 4.7 3.0 1 1 2 3 3 3 0 MerC mercury resistance protein DUF4191 PF13829.1 gi|84489905|ref|YP_448137.1| - 4.2 6.4 9.0 0.3 10.1 2.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) PalH PF08733.5 gi|84489905|ref|YP_448137.1| - 7.7 5.2 13.7 1.1 8.0 3.6 2.2 2 0 0 2 2 2 0 PalH/RIM21 ABC_tran PF00005.22 gi|84489906|ref|YP_448138.1| - 1.5e-55 187.2 0.1 8.5e-27 94.1 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|84489906|ref|YP_448138.1| - 3.6e-24 86.2 29.0 9.5e-16 58.5 7.8 4.8 3 2 0 3 3 2 2 AAA domain SMC_N PF02463.14 gi|84489906|ref|YP_448138.1| - 7.6e-16 58.0 1.4 1.2e-08 34.4 0.0 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|84489906|ref|YP_448138.1| - 1.4e-11 44.8 4.7 9.9e-07 29.1 0.0 3.8 3 1 1 4 4 4 2 AAA domain AAA_17 PF13207.1 gi|84489906|ref|YP_448138.1| - 7.3e-11 42.9 0.4 0.00027 21.7 0.0 3.0 3 0 0 3 3 2 2 AAA domain AAA_29 PF13555.1 gi|84489906|ref|YP_448138.1| - 1.3e-10 40.5 0.5 0.00024 20.5 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF258 PF03193.11 gi|84489906|ref|YP_448138.1| - 1.9e-08 33.6 0.1 3e-05 23.2 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|84489906|ref|YP_448138.1| - 2.1e-08 34.3 4.2 0.00018 21.6 0.1 4.0 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|84489906|ref|YP_448138.1| - 8.9e-08 32.3 0.0 0.00017 21.6 0.0 2.9 2 1 0 2 2 2 1 AAA ATPase domain T2SE PF00437.15 gi|84489906|ref|YP_448138.1| - 1.6e-07 30.5 0.1 0.0031 16.4 0.0 2.5 2 1 0 2 2 2 2 Type II/IV secretion system protein Arch_ATPase PF01637.13 gi|84489906|ref|YP_448138.1| - 1.6e-07 31.2 1.6 0.00019 21.2 0.0 2.8 2 0 0 2 2 2 1 Archaeal ATPase NACHT PF05729.7 gi|84489906|ref|YP_448138.1| - 2.8e-07 30.3 0.2 0.011 15.3 0.0 3.3 4 0 0 4 4 3 2 NACHT domain AAA_23 PF13476.1 gi|84489906|ref|YP_448138.1| - 4.2e-07 30.4 14.2 0.0025 18.1 0.2 2.7 3 0 0 3 3 2 2 AAA domain AAA_10 PF12846.2 gi|84489906|ref|YP_448138.1| - 6.3e-07 29.1 0.2 0.029 13.8 0.0 3.2 2 1 1 3 3 3 2 AAA-like domain AAA_33 PF13671.1 gi|84489906|ref|YP_448138.1| - 1.2e-06 28.4 0.5 0.0013 18.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain SbcCD_C PF13558.1 gi|84489906|ref|YP_448138.1| - 2e-06 27.6 0.0 0.42 10.5 0.0 4.1 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit Miro PF08477.8 gi|84489906|ref|YP_448138.1| - 2.2e-06 28.1 0.2 0.026 15.0 0.1 2.7 2 0 0 2 2 2 2 Miro-like protein AAA_14 PF13173.1 gi|84489906|ref|YP_448138.1| - 2.2e-06 27.5 1.5 0.0062 16.4 0.0 4.0 3 1 0 3 3 3 1 AAA domain AAA_25 PF13481.1 gi|84489906|ref|YP_448138.1| - 6.9e-06 25.5 0.0 0.078 12.3 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_30 PF13604.1 gi|84489906|ref|YP_448138.1| - 1.3e-05 24.9 0.0 0.16 11.5 0.0 3.0 2 1 0 2 2 2 2 AAA domain KAP_NTPase PF07693.9 gi|84489906|ref|YP_448138.1| - 1.4e-05 24.2 0.1 0.071 12.0 0.0 2.2 2 0 0 2 2 2 2 KAP family P-loop domain AAA_28 PF13521.1 gi|84489906|ref|YP_448138.1| - 1.8e-05 24.7 0.0 0.23 11.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|84489906|ref|YP_448138.1| - 1.9e-05 23.6 0.3 0.003 16.4 0.0 2.6 3 0 0 3 3 2 1 NB-ARC domain MobB PF03205.9 gi|84489906|ref|YP_448138.1| - 2.1e-05 24.2 0.4 0.031 13.9 0.0 2.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Dynamin_N PF00350.18 gi|84489906|ref|YP_448138.1| - 2.4e-05 24.2 0.5 0.0098 15.7 0.1 2.7 2 0 0 2 2 2 1 Dynamin family RNA_helicase PF00910.17 gi|84489906|ref|YP_448138.1| - 2.6e-05 24.3 0.5 0.17 12.0 0.0 3.3 4 0 0 4 4 2 2 RNA helicase FtsK_SpoIIIE PF01580.13 gi|84489906|ref|YP_448138.1| - 6.9e-05 22.4 0.1 0.42 10.0 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family UPF0079 PF02367.12 gi|84489906|ref|YP_448138.1| - 9.5e-05 22.0 1.1 0.019 14.6 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 G-alpha PF00503.15 gi|84489906|ref|YP_448138.1| - 0.00013 20.7 0.1 0.061 11.9 0.0 2.3 2 0 0 2 2 2 2 G-protein alpha subunit AAA PF00004.24 gi|84489906|ref|YP_448138.1| - 0.00014 22.0 0.3 0.054 13.6 0.0 3.5 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.7 gi|84489906|ref|YP_448138.1| - 0.00022 20.4 0.2 0.0036 16.4 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin IstB_IS21 PF01695.12 gi|84489906|ref|YP_448138.1| - 0.00031 20.2 1.6 0.29 10.5 0.0 4.0 4 0 0 4 4 4 1 IstB-like ATP binding protein NTPase_1 PF03266.10 gi|84489906|ref|YP_448138.1| - 0.00036 20.3 1.3 0.072 12.7 0.0 3.2 3 0 0 3 3 3 1 NTPase Pox_A32 PF04665.7 gi|84489906|ref|YP_448138.1| - 0.00052 19.3 0.2 1 8.5 0.0 2.8 2 0 0 2 2 2 2 Poxvirus A32 protein ABC_ATPase PF09818.4 gi|84489906|ref|YP_448138.1| - 0.00057 18.5 0.4 8.9 4.7 0.5 4.0 3 1 0 3 3 3 0 Predicted ATPase of the ABC class MMR_HSR1 PF01926.18 gi|84489906|ref|YP_448138.1| - 0.00077 19.3 1.3 1 9.3 0.0 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_5 PF07728.9 gi|84489906|ref|YP_448138.1| - 0.00096 18.8 0.2 0.38 10.4 0.0 2.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|84489906|ref|YP_448138.1| - 0.0017 18.0 0.1 0.98 9.2 0.0 2.3 2 0 0 2 2 2 1 Part of AAA domain PduV-EutP PF10662.4 gi|84489906|ref|YP_448138.1| - 0.0022 17.4 0.3 0.32 10.4 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.12 gi|84489906|ref|YP_448138.1| - 0.0023 17.5 0.5 2.3 7.6 0.1 2.7 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.16 gi|84489906|ref|YP_448138.1| - 0.0025 16.9 0.0 1.1 8.3 0.0 2.6 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI PRK PF00485.13 gi|84489906|ref|YP_448138.1| - 0.0031 17.0 0.0 1.3 8.5 0.0 2.5 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family PIF1 PF05970.9 gi|84489906|ref|YP_448138.1| - 0.0039 16.1 1.1 0.065 12.1 0.0 2.7 2 0 0 2 2 2 1 PIF1-like helicase cobW PF02492.14 gi|84489906|ref|YP_448138.1| - 0.0072 15.7 3.9 0.032 13.6 0.0 3.0 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|84489906|ref|YP_448138.1| - 0.0073 15.1 0.0 0.59 8.8 0.0 2.2 2 0 0 2 2 2 1 ArgK protein MutS_V PF00488.16 gi|84489906|ref|YP_448138.1| - 0.0088 15.4 0.1 1.4 8.2 0.0 2.3 2 0 0 2 2 2 1 MutS domain V KTI12 PF08433.5 gi|84489906|ref|YP_448138.1| - 0.0095 15.1 0.1 1.1 8.4 0.0 2.7 2 1 0 2 2 2 1 Chromatin associated protein KTI12 ATP-synt_ab PF00006.20 gi|84489906|ref|YP_448138.1| - 0.019 14.4 0.0 1.2 8.6 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain KaiC PF06745.8 gi|84489906|ref|YP_448138.1| - 0.022 13.9 0.3 3.3 6.7 0.0 2.8 3 0 0 3 3 2 0 KaiC DUF815 PF05673.8 gi|84489906|ref|YP_448138.1| - 0.022 13.6 0.1 15 4.4 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF815) SRP54 PF00448.17 gi|84489906|ref|YP_448138.1| - 0.022 14.1 3.1 0.95 8.8 0.0 3.1 2 1 1 3 3 3 0 SRP54-type protein, GTPase domain AAA_24 PF13479.1 gi|84489906|ref|YP_448138.1| - 0.024 14.2 2.3 0.54 9.7 0.0 2.9 3 0 0 3 3 3 0 AAA domain APS_kinase PF01583.15 gi|84489906|ref|YP_448138.1| - 0.045 13.3 0.1 0.19 11.3 0.0 2.0 2 0 0 2 2 2 0 Adenylylsulphate kinase Thymidylate_kin PF02223.12 gi|84489906|ref|YP_448138.1| - 0.06 12.7 4.1 2.4 7.4 0.0 3.1 4 0 0 4 4 3 0 Thymidylate kinase TrwB_AAD_bind PF10412.4 gi|84489906|ref|YP_448138.1| - 0.11 11.1 0.2 7.4 5.0 0.0 2.4 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain CbiQ PF02361.11 gi|84489907|ref|YP_448139.1| - 4.6e-15 55.7 13.1 4.6e-15 55.7 9.0 2.1 2 0 0 2 2 2 1 Cobalt transport protein Kelch_6 PF13964.1 gi|84489907|ref|YP_448139.1| - 0.27 11.4 1.8 14 6.0 0.2 2.6 2 0 0 2 2 2 0 Kelch motif Epimerase PF01370.16 gi|84489908|ref|YP_448140.1| - 6.7e-63 212.2 0.0 8.5e-63 211.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|84489908|ref|YP_448140.1| - 1.2e-21 76.8 0.0 1.5e-21 76.5 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|84489908|ref|YP_448140.1| - 2.5e-20 72.3 0.0 3.4e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|84489908|ref|YP_448140.1| - 1e-16 60.7 0.0 4.7e-16 58.5 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|84489908|ref|YP_448140.1| - 3.6e-14 52.3 0.0 3.4e-12 45.8 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 gi|84489908|ref|YP_448140.1| - 2.4e-06 27.7 0.0 3.8e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding Saccharop_dh PF03435.13 gi|84489908|ref|YP_448140.1| - 5.6e-06 25.5 0.1 1.4e-05 24.2 0.0 1.7 2 0 0 2 2 2 1 Saccharopine dehydrogenase Ldh_1_N PF00056.18 gi|84489908|ref|YP_448140.1| - 4.4e-05 23.3 0.2 7.4e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain NmrA PF05368.8 gi|84489908|ref|YP_448140.1| - 0.004 16.4 0.1 0.0065 15.7 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family DapB_N PF01113.15 gi|84489908|ref|YP_448140.1| - 0.0061 16.4 0.1 0.011 15.6 0.1 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus adh_short PF00106.20 gi|84489908|ref|YP_448140.1| - 0.0078 16.1 0.0 0.022 14.6 0.0 1.7 1 1 0 1 1 1 1 short chain dehydrogenase Epimerase_Csub PF13950.1 gi|84489908|ref|YP_448140.1| - 0.076 12.9 0.7 0.076 12.9 0.5 1.9 2 0 0 2 2 2 0 UDP-glucose 4-epimerase C-term subunit RmlD_sub_bind PF04321.12 gi|84489910|ref|YP_448142.1| - 4.7e-81 271.8 0.0 5.7e-81 271.5 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|84489910|ref|YP_448142.1| - 1.7e-23 83.3 0.1 2.2e-23 82.9 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|84489910|ref|YP_448142.1| - 1.6e-11 43.6 4.4 5.9e-11 41.8 2.7 2.1 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|84489910|ref|YP_448142.1| - 3.6e-11 42.4 0.9 3.9e-10 39.0 0.0 2.1 1 1 1 2 2 2 1 Male sterility protein 3Beta_HSD PF01073.14 gi|84489910|ref|YP_448142.1| - 2.3e-10 39.6 8.1 2.1e-09 36.4 5.6 2.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.1 gi|84489910|ref|YP_448142.1| - 6.3e-10 39.3 0.0 8.8e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|84489910|ref|YP_448142.1| - 2.6e-05 24.1 2.1 0.001 19.0 1.1 2.5 2 1 0 2 2 2 1 short chain dehydrogenase KR PF08659.5 gi|84489910|ref|YP_448142.1| - 0.035 13.7 1.0 0.77 9.3 0.7 2.5 1 1 0 1 1 1 0 KR domain DUF371 PF04027.8 gi|84489911|ref|YP_448143.1| - 1.6e-53 179.8 3.3 1.8e-53 179.7 2.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) DUF123 PF01986.11 gi|84489912|ref|YP_448144.1| - 2.3e-32 111.0 0.4 3e-32 110.6 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 Fer4_NifH PF00142.13 gi|84489913|ref|YP_448145.1| - 3.6e-96 321.5 1.7 4e-96 321.3 1.1 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|84489913|ref|YP_448145.1| - 1.2e-07 31.3 0.1 1.6e-07 30.9 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.1 gi|84489913|ref|YP_448145.1| - 0.0015 18.1 0.1 0.0024 17.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|84489913|ref|YP_448145.1| - 0.002 18.2 0.0 0.0087 16.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|84489913|ref|YP_448145.1| - 0.011 15.1 0.1 0.037 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|84489913|ref|YP_448145.1| - 0.02 15.0 0.3 0.15 12.2 0.0 2.3 2 1 0 2 2 2 0 RNA helicase AAA_5 PF07728.9 gi|84489913|ref|YP_448145.1| - 0.027 14.2 0.0 0.14 11.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) ArsA_ATPase PF02374.10 gi|84489913|ref|YP_448145.1| - 0.031 13.3 1.3 0.11 11.5 0.3 2.0 2 0 0 2 2 2 0 Anion-transporting ATPase ABC_tran PF00005.22 gi|84489913|ref|YP_448145.1| - 0.045 14.0 0.0 0.092 13.0 0.0 1.6 2 0 0 2 2 2 0 ABC transporter DUF87 PF01935.12 gi|84489913|ref|YP_448145.1| - 0.057 13.2 0.4 0.19 11.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function DUF87 Miro PF08477.8 gi|84489913|ref|YP_448145.1| - 0.067 13.6 0.0 0.15 12.6 0.0 1.6 1 0 0 1 1 1 0 Miro-like protein NB-ARC PF00931.17 gi|84489913|ref|YP_448145.1| - 0.068 12.0 0.0 0.11 11.3 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_17 PF13207.1 gi|84489913|ref|YP_448145.1| - 0.1 13.4 0.6 0.26 12.1 0.4 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|84489913|ref|YP_448145.1| - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Peptidase_U32 PF01136.14 gi|84489914|ref|YP_448146.1| - 5.3e-82 274.2 0.1 9.6e-82 273.3 0.0 1.4 2 0 0 2 2 2 1 Peptidase family U32 GTP_EFTU_D2 PF03144.20 gi|84489914|ref|YP_448146.1| - 0.17 11.9 2.0 0.44 10.6 1.4 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 GATase_6 PF13522.1 gi|84489915|ref|YP_448147.1| - 2.8e-22 79.1 0.0 6e-22 78.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|84489915|ref|YP_448147.1| - 1.1e-20 73.6 0.0 1.7e-20 72.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|84489915|ref|YP_448147.1| - 3.2e-20 72.1 0.1 4.4e-15 55.2 0.0 2.9 1 1 1 2 2 2 2 Glutamine amidotransferases class-II Pribosyltran PF00156.22 gi|84489915|ref|YP_448147.1| - 7.6e-14 51.5 2.0 1.9e-13 50.2 0.7 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|84489915|ref|YP_448147.1| - 7e-09 34.7 0.0 1.2e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II UPRTase PF14681.1 gi|84489915|ref|YP_448147.1| - 0.052 12.7 0.0 0.1 11.8 0.0 1.4 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase FMN_red PF03358.10 gi|84489916|ref|YP_448148.1| - 4.8e-25 87.8 0.0 6.3e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84489916|ref|YP_448148.1| - 1.6e-16 60.4 0.0 2e-16 60.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold PDH PF02153.12 gi|84489916|ref|YP_448148.1| - 0.099 11.5 0.0 0.15 10.9 0.0 1.3 1 0 0 1 1 1 0 Prephenate dehydrogenase DUF89 PF01937.14 gi|84489917|ref|YP_448149.1| - 1.9e-54 184.7 3.9 2.2e-54 184.6 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 Pox_polyA_pol_N PF12630.2 gi|84489917|ref|YP_448149.1| - 0.75 9.9 3.4 2.3 8.3 0.2 2.8 2 1 2 4 4 4 0 Poxvirus poly(A) polymerase N-terminal domain TrmB PF01978.14 gi|84489918|ref|YP_448150.1| - 9.3e-22 76.5 1.6 2.4e-21 75.1 1.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|84489918|ref|YP_448150.1| - 0.002 18.1 0.1 0.004 17.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|84489918|ref|YP_448150.1| - 0.0023 17.4 0.0 0.0042 16.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.1 gi|84489918|ref|YP_448150.1| - 0.0064 16.5 0.2 0.016 15.3 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|84489918|ref|YP_448150.1| - 0.018 15.1 0.1 0.039 14.0 0.0 1.6 1 0 0 1 1 1 0 Penicillinase repressor PadR PF03551.9 gi|84489918|ref|YP_448150.1| - 0.02 14.6 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family RPA_C PF08784.6 gi|84489918|ref|YP_448150.1| - 0.054 13.9 0.0 15 6.1 0.0 2.5 2 0 0 2 2 2 0 Replication protein A C terminal MarR PF01047.17 gi|84489918|ref|YP_448150.1| - 0.06 13.0 0.1 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.1 gi|84489918|ref|YP_448150.1| - 0.081 12.3 0.1 0.21 10.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|84489918|ref|YP_448150.1| - 0.12 12.5 0.4 0.31 11.1 0.1 1.8 2 0 0 2 2 2 0 Transcriptional regulator FeoC PF09012.5 gi|84489918|ref|YP_448150.1| - 0.14 11.9 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Prismane PF03063.15 gi|162316921|ref|YP_448151.2| - 6.5e-117 391.0 0.5 2.1e-99 333.2 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Radical_SAM PF04055.16 gi|84489920|ref|YP_448152.1| - 0.00093 19.4 1.8 0.01 15.9 0.4 2.6 1 1 2 3 3 3 1 Radical SAM superfamily Bac_luciferase PF00296.15 gi|84489921|ref|YP_448153.1| - 3.8e-53 180.6 0.0 4.2e-53 180.4 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase PMBR PF09373.5 gi|84489922|ref|YP_448154.1| - 3.3e-24 83.6 34.1 4.9e-06 26.2 0.3 8.1 7 0 0 7 7 7 5 Pseudomurein-binding repeat Transglut_core PF01841.14 gi|84489922|ref|YP_448154.1| - 3e-20 72.5 1.4 8.2e-20 71.1 1.0 1.8 1 0 0 1 1 1 1 Transglutaminase-like superfamily Peptidase_C71 PF12386.3 gi|84489922|ref|YP_448154.1| - 0.0013 18.1 3.2 0.0013 18.1 2.3 2.7 3 0 0 3 3 3 1 Pseudomurein endo-isopeptidase Pei Big_1 PF02369.11 gi|84489922|ref|YP_448154.1| - 0.0046 16.8 7.6 0.0046 16.8 5.3 6.1 6 0 0 6 6 6 4 Bacterial Ig-like domain (group 1) Transglut_core3 PF13471.1 gi|84489922|ref|YP_448154.1| - 0.24 11.1 0.1 0.56 10.0 0.0 1.6 1 0 0 1 1 1 0 Transglutaminase-like superfamily ATP-grasp_3 PF02655.9 gi|84489924|ref|YP_448156.1| - 1.9e-29 102.6 0.0 2.6e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|84489924|ref|YP_448156.1| - 4.6e-13 49.3 0.0 4.7e-12 46.0 0.0 2.3 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|84489924|ref|YP_448156.1| - 2e-10 39.9 0.0 0.00018 20.3 0.0 2.2 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_ST PF14397.1 gi|84489924|ref|YP_448156.1| - 9.6e-07 28.1 0.3 0.0064 15.6 0.0 2.6 3 0 0 3 3 3 2 Sugar-transfer associated ATP-grasp RimK PF08443.6 gi|84489924|ref|YP_448156.1| - 1.6e-06 27.7 0.1 5.3e-06 26.0 0.0 1.8 1 1 0 1 1 1 1 RimK-like ATP-grasp domain CPSase_L_D2 PF02786.12 gi|84489924|ref|YP_448156.1| - 3.6e-06 26.4 0.1 1.5e-05 24.3 0.0 2.0 2 1 1 3 3 3 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_TupA PF14305.1 gi|84489924|ref|YP_448156.1| - 0.0012 18.1 0.1 0.059 12.6 0.1 2.5 2 0 0 2 2 2 1 TupA-like ATPgrasp Dala_Dala_lig_C PF07478.8 gi|84489924|ref|YP_448156.1| - 0.003 16.9 0.1 0.018 14.4 0.0 2.0 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.1 gi|84489924|ref|YP_448156.1| - 0.018 13.8 0.2 0.46 9.2 0.1 2.1 2 0 0 2 2 2 0 YheC/D like ATP-grasp PSP94 PF05825.6 gi|84489924|ref|YP_448156.1| - 0.099 12.9 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 Beta-microseminoprotein (PSP-94) ATP-synt_D PF01813.12 gi|84489925|ref|YP_448157.1| - 3e-65 219.4 9.1 3.4e-65 219.2 6.3 1.0 1 0 0 1 1 1 1 ATP synthase subunit D ATP-synt_ab PF00006.20 gi|84489926|ref|YP_448158.1| - 1.1e-61 208.0 0.0 1.5e-61 207.6 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|84489926|ref|YP_448158.1| - 2e-15 57.2 0.8 3.8e-15 56.3 0.5 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|84489926|ref|YP_448158.1| - 6e-12 45.6 3.2 1.3e-11 44.5 2.2 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|84489926|ref|YP_448158.1| - 3.9e-05 23.4 1.2 0.00012 21.9 0.8 1.9 1 0 0 1 1 1 1 HAS barrel domain ATP-synt_ab PF00006.20 gi|84489927|ref|YP_448159.1| - 3.6e-93 310.9 0.0 7.9e-93 309.8 0.0 1.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|84489927|ref|YP_448159.1| - 1.1e-19 70.9 0.2 2.4e-19 69.8 0.1 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|84489927|ref|YP_448159.1| - 5.6e-11 42.4 4.7 8.2e-11 41.9 2.6 1.9 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.1 gi|84489927|ref|YP_448159.1| - 0.041 13.5 1.0 0.1 12.3 0.1 2.0 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain ATP-synt_F PF01990.12 gi|84489928|ref|YP_448160.1| - 1.9e-24 85.8 0.2 2.2e-24 85.6 0.1 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_AC39 PF01992.11 gi|84489929|ref|YP_448161.1| - 6.6e-81 272.0 7.1 7.5e-81 271.8 4.9 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.13 gi|84489930|ref|YP_448162.1| - 3.9e-44 150.3 21.9 4.4e-44 150.1 15.1 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit HrpE PF06188.7 gi|84489930|ref|YP_448162.1| - 0.0044 16.7 4.8 0.0071 16.1 3.3 1.4 1 0 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E DUF970 PF06153.6 gi|84489930|ref|YP_448162.1| - 0.39 10.7 3.0 0.48 10.4 0.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF970) ATP-synt_B PF00430.13 gi|84489930|ref|YP_448162.1| - 0.64 9.8 28.2 0.12 12.1 15.2 2.4 2 1 1 3 3 3 0 ATP synthase B/B' CF(0) PRP1_N PF06424.7 gi|84489930|ref|YP_448162.1| - 9.6 6.5 11.0 1.1 9.5 4.6 1.7 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal ATP-synt_C PF00137.16 gi|84489931|ref|YP_448163.1| - 2e-37 126.8 41.9 4.8e-20 71.2 9.9 2.7 2 1 1 3 3 3 2 ATP synthase subunit C DUF4077 PF13295.1 gi|84489931|ref|YP_448163.1| - 0.024 14.3 0.3 0.88 9.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4077) Neuralized PF07177.7 gi|84489931|ref|YP_448163.1| - 0.089 12.6 0.0 2.7 7.9 0.0 2.3 2 0 0 2 2 2 0 Neuralized KRTAP PF11759.3 gi|84489931|ref|YP_448163.1| - 1.8 8.8 14.7 7.3 6.9 0.2 2.4 2 1 0 2 2 2 0 Keratin-associated matrix DUF4006 PF13179.1 gi|84489931|ref|YP_448163.1| - 2 8.0 5.6 12 5.5 0.4 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF4006) V_ATPase_I PF01496.14 gi|84489932|ref|YP_448164.1| - 4.9e-107 358.6 14.6 1.2e-80 271.4 2.1 2.0 1 1 1 2 2 2 2 V-type ATPase 116kDa subunit family DUF4355 PF14265.1 gi|84489932|ref|YP_448164.1| - 3 7.8 7.1 19 5.2 1.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) V-ATPase_G PF03179.10 gi|84489933|ref|YP_448165.1| - 1.5e-06 28.4 10.5 1.8e-06 28.1 7.3 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit DUF883 PF05957.8 gi|84489933|ref|YP_448165.1| - 0.01 16.1 5.6 0.012 15.9 3.2 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Peptidase_M41 PF01434.13 gi|84489933|ref|YP_448165.1| - 0.019 14.4 4.0 0.023 14.1 2.5 1.2 1 1 0 1 1 1 0 Peptidase family M41 UBA PF00627.26 gi|84489933|ref|YP_448165.1| - 0.045 13.6 0.0 0.14 12.0 0.0 1.9 1 0 0 1 1 1 0 UBA/TS-N domain ATP-synt_B PF00430.13 gi|84489933|ref|YP_448165.1| - 0.069 12.9 16.4 0.032 14.0 6.9 2.0 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) HrpE PF06188.7 gi|84489933|ref|YP_448165.1| - 0.15 11.8 5.6 0.21 11.3 3.9 1.4 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E vATP-synt_E PF01991.13 gi|84489933|ref|YP_448165.1| - 0.17 11.1 16.2 1 8.6 3.2 2.0 1 1 1 2 2 2 0 ATP synthase (E/31 kDa) subunit DZF PF07528.9 gi|84489933|ref|YP_448165.1| - 0.26 10.6 1.6 0.27 10.5 1.1 1.1 1 0 0 1 1 1 0 DZF domain DivIVA PF05103.8 gi|84489933|ref|YP_448165.1| - 0.33 10.9 12.2 0.39 10.7 4.9 2.2 1 1 1 2 2 2 0 DivIVA protein 3HCDH_N PF02737.13 gi|84489933|ref|YP_448165.1| - 0.44 10.1 7.2 0.48 10.0 4.7 1.5 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF1743 PF08489.6 gi|84489934|ref|YP_448166.1| - 2.5e-41 140.1 0.0 3.8e-41 139.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.20 gi|84489934|ref|YP_448166.1| - 0.00015 21.5 0.0 0.00054 19.7 0.0 1.9 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain zf-ISL3 PF14690.1 gi|84489934|ref|YP_448166.1| - 0.089 12.8 1.9 0.1 12.6 0.2 2.0 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF2769 PF10967.3 gi|84489934|ref|YP_448166.1| - 0.64 10.3 6.6 3.4 8.0 0.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) OrfB_Zn_ribbon PF07282.6 gi|84489934|ref|YP_448166.1| - 0.83 9.3 4.3 0.23 11.1 0.4 2.0 2 0 0 2 2 2 0 Putative transposase DNA-binding domain HTH_3 PF01381.17 gi|84489935|ref|YP_448167.1| - 6.2e-11 41.9 0.1 2.1e-10 40.2 0.1 2.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|84489935|ref|YP_448167.1| - 7.5e-09 35.5 0.2 7.5e-09 35.5 0.1 2.4 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|84489935|ref|YP_448167.1| - 5.9e-06 26.3 0.0 1.5e-05 25.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|84489935|ref|YP_448167.1| - 0.00015 21.2 0.6 0.00037 20.0 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|84489935|ref|YP_448167.1| - 0.00076 19.0 0.1 0.00076 19.0 0.1 3.0 4 0 0 4 4 4 1 HTH domain HTH_7 PF02796.10 gi|84489935|ref|YP_448167.1| - 0.0034 17.2 0.4 0.014 15.2 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_17 PF12728.2 gi|84489935|ref|YP_448167.1| - 0.046 13.9 0.0 0.15 12.3 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_AlpA PF05930.7 gi|84489935|ref|YP_448167.1| - 0.057 13.1 0.0 0.2 11.4 0.0 1.9 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) MarR PF01047.17 gi|84489935|ref|YP_448167.1| - 0.08 12.6 1.5 0.31 10.7 0.0 2.6 3 0 0 3 3 3 0 MarR family Bap31 PF05529.7 gi|84489935|ref|YP_448167.1| - 0.082 12.3 3.7 0.16 11.3 2.6 1.5 1 0 0 1 1 1 0 B-cell receptor-associated protein 31-like HTH_23 PF13384.1 gi|84489935|ref|YP_448167.1| - 0.11 12.1 0.0 0.32 10.6 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain MerR PF00376.18 gi|84489935|ref|YP_448167.1| - 0.12 11.9 0.0 0.33 10.5 0.0 1.8 1 0 0 1 1 1 0 MerR family regulatory protein IncA PF04156.9 gi|84489935|ref|YP_448167.1| - 0.46 10.0 6.7 0.86 9.1 4.6 1.5 1 0 0 1 1 1 0 IncA protein 2-Hacid_dh_C PF02826.14 gi|84489937|ref|YP_448169.1| - 2.5e-63 212.4 0.0 4.4e-63 211.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|84489937|ref|YP_448169.1| - 2.6e-38 130.5 1.7 2.6e-38 130.5 1.2 2.4 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.20 gi|84489937|ref|YP_448169.1| - 1.6e-09 37.0 0.5 1.1e-08 34.3 0.0 2.5 2 0 0 2 2 2 1 ACT domain NAD_binding_2 PF03446.10 gi|84489937|ref|YP_448169.1| - 6.4e-06 26.0 2.9 2.4e-05 24.2 0.0 2.9 3 1 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|84489937|ref|YP_448169.1| - 0.0011 19.3 2.9 0.045 14.1 0.0 4.0 4 1 0 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|84489937|ref|YP_448169.1| - 0.0037 17.4 0.5 0.037 14.2 0.0 2.6 2 0 0 2 2 2 1 Putative NAD(P)-binding IlvN PF07991.7 gi|84489937|ref|YP_448169.1| - 0.0037 16.6 0.0 0.011 15.1 0.0 1.8 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 gi|84489937|ref|YP_448169.1| - 0.018 15.0 1.7 0.076 13.0 0.1 2.8 2 0 0 2 2 2 0 TrkA-N domain ACT_4 PF13291.1 gi|84489937|ref|YP_448169.1| - 0.28 11.5 3.7 1.4 9.3 0.0 3.7 3 1 1 4 4 4 0 ACT domain UDPG_MGDP_dh_C PF03720.10 gi|84489937|ref|YP_448169.1| - 0.33 11.1 2.9 0.95 9.6 0.1 3.1 4 0 0 4 4 4 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Prok-JAB PF14464.1 gi|84489938|ref|YP_448170.1| - 2.1e-13 49.7 0.0 3.4e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 gi|84489938|ref|YP_448170.1| - 2.3e-09 36.9 1.4 1.3e-08 34.6 0.0 2.5 3 0 0 3 3 3 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease APG6 PF04111.7 gi|84489938|ref|YP_448170.1| - 0.0024 16.9 8.4 0.096 11.7 0.8 2.1 2 0 0 2 2 2 2 Autophagy protein Apg6 FliD_C PF07195.7 gi|84489938|ref|YP_448170.1| - 0.0071 15.6 0.8 0.021 14.1 0.4 2.0 2 1 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus IncA PF04156.9 gi|84489938|ref|YP_448170.1| - 0.086 12.4 1.4 0.33 10.5 0.3 2.1 2 0 0 2 2 2 0 IncA protein Lge1 PF11488.3 gi|84489938|ref|YP_448170.1| - 0.27 11.4 5.0 0.16 12.2 0.6 2.3 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 DUF972 PF06156.8 gi|84489938|ref|YP_448170.1| - 0.76 10.1 10.0 0.52 10.6 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF972) Fzo_mitofusin PF04799.8 gi|84489938|ref|YP_448170.1| - 1.3 8.3 6.9 0.13 11.6 0.8 2.0 2 0 0 2 2 2 0 fzo-like conserved region TSC22 PF01166.13 gi|84489938|ref|YP_448170.1| - 2.4 8.1 10.6 0.55 10.2 1.7 2.6 2 0 0 2 2 2 0 TSC-22/dip/bun family bZIP_2 PF07716.10 gi|84489938|ref|YP_448170.1| - 2.5 7.9 10.3 0.21 11.4 1.3 2.4 2 0 0 2 2 2 0 Basic region leucine zipper Med9 PF07544.8 gi|84489938|ref|YP_448170.1| - 4.5 7.0 8.3 0.2 11.3 1.6 1.9 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Thg1 PF04446.7 gi|84489939|ref|YP_448171.1| - 4.5e-34 116.9 0.7 7.6e-34 116.2 0.3 1.5 2 0 0 2 2 2 1 tRNAHis guanylyltransferase Thg1C PF14413.1 gi|84489939|ref|YP_448171.1| - 7.4e-22 77.2 5.6 1.1e-21 76.7 3.9 1.3 1 0 0 1 1 1 1 Thg1 C terminal domain NurA PF09376.5 gi|84489939|ref|YP_448171.1| - 0.091 12.2 1.2 0.093 12.1 0.2 1.5 2 0 0 2 2 2 0 NurA domain DUF108 PF01958.13 gi|84489940|ref|YP_448172.1| - 3.6e-31 107.2 0.1 6.6e-31 106.3 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 gi|84489940|ref|YP_448172.1| - 7e-22 78.0 0.1 1.2e-21 77.2 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|84489940|ref|YP_448172.1| - 1.4e-06 28.1 0.1 6.5e-06 26.0 0.0 1.9 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|84489940|ref|YP_448172.1| - 1.1e-05 25.8 0.1 4.9e-05 23.8 0.0 2.0 3 0 0 3 3 3 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.19 gi|84489940|ref|YP_448172.1| - 0.00015 22.0 0.1 0.00022 21.5 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Peptidase_M42 PF05343.9 gi|84489940|ref|YP_448172.1| - 0.0049 15.6 0.0 0.0091 14.7 0.0 1.4 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase 2-Hacid_dh_C PF02826.14 gi|84489940|ref|YP_448172.1| - 0.005 16.0 0.0 0.0072 15.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|84489940|ref|YP_448172.1| - 0.0086 16.4 1.2 0.012 15.9 0.3 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Lsm_C PF14894.1 gi|84489940|ref|YP_448172.1| - 0.1 12.1 0.0 6.3 6.3 0.0 2.7 2 0 0 2 2 2 0 Lsm C-terminal DUF3355 PF11835.3 gi|84489940|ref|YP_448172.1| - 0.11 12.3 1.3 0.85 9.4 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3355) ATP_bind_4 PF01902.12 gi|84489940|ref|YP_448172.1| - 0.11 11.8 0.3 0.21 10.8 0.1 1.6 2 0 0 2 2 2 0 ATP-binding region PRC PF05239.11 gi|84489941|ref|YP_448173.1| - 5.1e-10 39.0 4.6 8.1e-09 35.2 3.2 2.2 1 1 0 1 1 1 1 PRC-barrel domain tRNA_bind PF01588.15 gi|84489942|ref|YP_448174.1| - 5.8e-17 61.3 0.1 9.3e-17 60.6 0.1 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain AIG1 PF04548.11 gi|84489942|ref|YP_448174.1| - 0.029 13.4 0.1 0.044 12.8 0.0 1.3 1 0 0 1 1 1 0 AIG1 family Class_IIIsignal PF04021.7 gi|84489943|ref|YP_448175.1| - 4.2e-07 29.4 4.6 5e-07 29.2 3.2 1.1 1 0 0 1 1 1 1 Class III signal peptide ZapA PF05164.8 gi|84489943|ref|YP_448175.1| - 0.021 14.7 0.3 0.085 12.8 0.2 1.8 1 1 0 1 1 1 0 Cell division protein ZapA Halogen_Hydrol PF10112.4 gi|84489943|ref|YP_448175.1| - 0.032 13.6 0.1 0.034 13.5 0.1 1.0 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Chordopox_A13L PF05961.6 gi|84489943|ref|YP_448175.1| - 0.046 13.6 1.0 0.059 13.3 0.7 1.2 1 0 0 1 1 1 0 Chordopoxvirus A13L protein Vpu PF00558.14 gi|84489943|ref|YP_448175.1| - 0.05 13.1 0.2 0.062 12.8 0.2 1.2 1 0 0 1 1 1 0 Vpu protein DivIC PF04977.10 gi|84489943|ref|YP_448175.1| - 0.081 12.4 1.2 0.097 12.1 0.8 1.1 1 0 0 1 1 1 0 Septum formation initiator DUF1361 PF07099.6 gi|84489943|ref|YP_448175.1| - 0.083 12.7 0.1 0.084 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) MtrG PF04210.8 gi|84489943|ref|YP_448175.1| - 0.087 12.5 0.4 0.087 12.5 0.3 2.0 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF4191 PF13829.1 gi|84489943|ref|YP_448175.1| - 0.78 8.8 2.6 0.62 9.1 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) T2SF PF00482.18 gi|84489944|ref|YP_448176.1| - 4.4e-18 65.3 0.3 4.4e-18 65.3 0.2 2.9 2 1 0 2 2 2 1 Type II secretion system (T2SS), protein F ABC2_membrane_4 PF12730.2 gi|84489944|ref|YP_448176.1| - 0.0048 16.1 25.7 0.17 11.0 3.7 2.3 2 0 0 2 2 2 2 ABC-2 family transporter protein DUF2244 PF10003.4 gi|84489944|ref|YP_448176.1| - 0.3 10.4 4.1 0.16 11.3 0.5 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) MIF4G PF02854.14 gi|84489944|ref|YP_448176.1| - 0.66 9.3 11.3 1.1 8.6 2.3 3.0 2 1 1 3 3 3 0 MIF4G domain Claudin_2 PF13903.1 gi|84489944|ref|YP_448176.1| - 0.75 9.4 6.3 0.45 10.1 0.1 2.8 2 1 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction Pex24p PF06398.6 gi|84489944|ref|YP_448176.1| - 1.7 7.3 5.2 0.41 9.4 1.2 1.7 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Peptidase_M24 PF00557.19 gi|84489945|ref|YP_448177.1| - 1.3e-52 178.3 0.0 1.8e-52 177.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|84489945|ref|YP_448177.1| - 2.8e-10 40.7 0.0 6.8e-10 39.5 0.0 1.6 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Peptidase_M50 PF02163.17 gi|84489946|ref|YP_448178.1| - 6.4e-15 54.6 20.7 7.8e-14 51.0 11.6 2.5 2 1 0 2 2 2 1 Peptidase family M50 YcaO PF02624.11 gi|84489947|ref|YP_448179.1| - 1.3e-91 307.5 0.0 1.6e-91 307.2 0.0 1.1 1 0 0 1 1 1 1 YcaO-like family PTH2 PF01981.11 gi|84489948|ref|YP_448180.1| - 1.6e-43 147.0 0.1 1.8e-43 146.9 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DUF2179 PF10035.4 gi|84489948|ref|YP_448180.1| - 0.12 11.9 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) AA_kinase PF00696.23 gi|84489949|ref|YP_448181.1| - 3.7e-16 59.3 0.1 3.3e-09 36.6 0.0 2.1 1 1 1 2 2 2 2 Amino acid kinase family COX2 PF00116.15 gi|84489949|ref|YP_448181.1| - 0.059 13.1 0.0 0.097 12.5 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain DUF1610 PF07754.6 gi|84489950|ref|YP_448182.1| - 0.0011 19.0 2.4 0.0011 19.0 1.7 3.4 3 1 0 3 3 3 2 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.1 gi|84489950|ref|YP_448182.1| - 0.0024 17.2 1.8 0.0024 17.2 1.2 3.3 3 1 0 3 3 3 1 zinc-ribbon domain zf-NADH-PPase PF09297.6 gi|84489950|ref|YP_448182.1| - 0.024 14.1 7.8 0.51 9.8 0.1 3.3 2 1 1 3 3 3 0 NADH pyrophosphatase zinc ribbon domain DUF2004 PF09406.5 gi|84489950|ref|YP_448182.1| - 0.042 13.9 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2004) UPF0547 PF10571.4 gi|84489950|ref|YP_448182.1| - 0.046 13.4 0.3 0.046 13.4 0.2 3.8 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 DUF4475 PF14753.1 gi|84489950|ref|YP_448182.1| - 0.057 12.9 7.7 0.061 12.8 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4475) DUF2296 PF10058.4 gi|84489950|ref|YP_448182.1| - 0.074 12.8 11.6 0.76 9.5 2.9 2.9 1 1 1 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) DNA_ligase_ZBD PF03119.11 gi|84489950|ref|YP_448182.1| - 0.085 12.5 4.2 0.17 11.6 0.1 2.6 1 1 1 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain NinF PF05810.7 gi|84489950|ref|YP_448182.1| - 0.11 12.2 3.1 0.11 12.3 1.7 1.5 1 1 0 1 1 1 0 NinF protein RNHCP PF12647.2 gi|84489950|ref|YP_448182.1| - 0.16 11.7 8.3 1.9 8.3 5.8 2.0 1 1 0 1 1 1 0 RNHCP domain zf-B_box PF00643.19 gi|84489950|ref|YP_448182.1| - 0.18 11.7 11.0 0.27 11.1 7.0 1.8 1 1 0 1 1 1 0 B-box zinc finger HypA PF01155.14 gi|84489950|ref|YP_448182.1| - 0.21 11.2 8.4 1.2 8.8 5.8 1.9 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family tRNA-synt_1g PF09334.6 gi|84489950|ref|YP_448182.1| - 0.23 10.0 3.4 0.25 9.9 2.4 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) PhnA_Zn_Ribbon PF08274.7 gi|84489950|ref|YP_448182.1| - 0.39 10.5 13.6 1 9.1 0.2 3.4 2 1 0 2 2 2 0 PhnA Zinc-Ribbon Gin PF10764.4 gi|84489950|ref|YP_448182.1| - 0.43 10.3 9.2 1 9.1 0.6 2.4 1 1 1 2 2 2 0 Inhibitor of sigma-G Gin DUF2039 PF10217.4 gi|84489950|ref|YP_448182.1| - 0.59 10.1 6.9 0.84 9.6 4.4 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) zinc-ribbons_6 PF07191.7 gi|84489950|ref|YP_448182.1| - 0.62 9.8 10.9 1.8 8.4 7.6 1.9 1 1 0 1 1 1 0 zinc-ribbons DZR PF12773.2 gi|84489950|ref|YP_448182.1| - 0.78 9.6 13.0 24 4.8 9.0 2.7 1 1 0 1 1 1 0 Double zinc ribbon Mut7-C PF01927.11 gi|84489950|ref|YP_448182.1| - 0.81 9.6 3.3 0.94 9.4 2.3 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain C1_3 PF07649.7 gi|84489950|ref|YP_448182.1| - 0.9 9.6 13.6 1.5 8.9 2.7 3.0 1 1 1 2 2 2 0 C1-like domain Mu-like_Com PF10122.4 gi|84489950|ref|YP_448182.1| - 0.92 8.6 6.4 1.9 7.5 0.5 2.3 1 1 1 2 2 2 0 Mu-like prophage protein Com Sgf11 PF08209.6 gi|84489950|ref|YP_448182.1| - 0.95 8.8 9.9 2.8 7.3 0.2 3.3 2 1 1 3 3 3 0 Sgf11 (transcriptional regulation protein) C1_4 PF07975.7 gi|84489950|ref|YP_448182.1| - 1.7 8.6 12.3 4.9 7.2 8.6 1.8 1 1 0 1 1 1 0 TFIIH C1-like domain zf-ribbon_3 PF13248.1 gi|84489950|ref|YP_448182.1| - 2.9 7.2 14.0 5.8 6.2 0.2 3.8 2 1 2 4 4 4 0 zinc-ribbon domain zf-RING_4 PF14570.1 gi|84489950|ref|YP_448182.1| - 3.9 7.1 19.5 3.3 7.3 2.1 3.3 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain zf-TFIIB PF13453.1 gi|84489950|ref|YP_448182.1| - 5.2 6.3 11.9 36 3.6 8.2 2.6 1 1 0 1 1 1 0 Transcription factor zinc-finger zf-CCHC_6 PF15288.1 gi|84489950|ref|YP_448182.1| - 5.6 6.7 8.0 0.78 9.4 2.3 2.0 2 0 0 2 2 2 0 Zinc knuckle zinc_ribbon_5 PF13719.1 gi|84489950|ref|YP_448182.1| - 5.8 6.5 12.4 9.6 5.8 0.2 3.3 2 1 1 3 3 3 0 zinc-ribbon domain Tnp_zf-ribbon_2 PF13842.1 gi|84489950|ref|YP_448182.1| - 6.1 7.3 13.9 18 5.8 9.6 1.9 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon zf-C3HC4_3 PF13920.1 gi|84489950|ref|YP_448182.1| - 8.1 6.2 14.9 36 4.1 7.6 2.6 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PolC_DP2 PF03833.8 gi|84489950|ref|YP_448182.1| - 8.3 3.9 6.8 8.8 3.8 4.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 EF1_GNE PF00736.14 gi|84489951|ref|YP_448183.1| - 2.3e-23 81.6 0.7 2.5e-23 81.5 0.5 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain DNA_pol3_a_NII PF11490.3 gi|84489951|ref|YP_448183.1| - 0.13 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II P2 PF07194.6 gi|84489951|ref|YP_448183.1| - 0.41 10.5 1.9 6.7 6.6 0.2 2.2 1 1 1 2 2 2 0 P2 response regulator binding domain TctA PF01970.11 gi|84489952|ref|YP_448184.1| - 1.7e-62 211.1 42.0 2e-62 210.9 29.1 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family TMEM191C PF15194.1 gi|84489952|ref|YP_448184.1| - 0.0071 16.2 2.4 0.013 15.3 0.8 2.2 1 1 1 2 2 2 1 TMEM191C family PrmA PF06325.8 gi|84489953|ref|YP_448185.1| - 2.8e-07 29.9 0.1 4.7e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.9 gi|84489953|ref|YP_448185.1| - 8e-07 28.5 0.1 1.4e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TRM PF02005.11 gi|84489953|ref|YP_448185.1| - 1.8e-06 27.1 0.0 1.8e-06 27.1 0.0 1.9 2 1 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_26 PF13659.1 gi|84489953|ref|YP_448185.1| - 7.3e-06 26.0 0.0 1.2e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|84489953|ref|YP_448185.1| - 3.4e-05 23.3 0.0 6e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.1 gi|84489953|ref|YP_448185.1| - 0.00031 20.3 1.5 0.00065 19.3 0.3 2.1 1 1 1 2 2 2 1 Methyltransferase domain UPF0020 PF01170.13 gi|84489953|ref|YP_448185.1| - 0.0064 16.0 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_18 PF12847.2 gi|84489953|ref|YP_448185.1| - 0.032 14.8 0.0 0.07 13.7 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain CPT PF07931.7 gi|84489953|ref|YP_448185.1| - 0.15 11.6 0.0 0.33 10.5 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein T2SE PF00437.15 gi|84489954|ref|YP_448186.1| - 1.8e-63 213.9 1.3 4e-63 212.8 0.9 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein Zeta_toxin PF06414.7 gi|84489954|ref|YP_448186.1| - 0.00023 20.2 0.4 0.0022 17.1 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin ABC_tran PF00005.22 gi|84489954|ref|YP_448186.1| - 0.00086 19.6 1.4 0.0021 18.3 0.1 2.3 2 0 0 2 2 2 1 ABC transporter FtsK_SpoIIIE PF01580.13 gi|84489954|ref|YP_448186.1| - 0.005 16.3 0.0 0.011 15.2 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_18 PF13238.1 gi|84489954|ref|YP_448186.1| - 0.0057 16.9 0.0 0.0057 16.9 0.0 3.4 3 1 1 4 4 4 1 AAA domain AAA_19 PF13245.1 gi|84489954|ref|YP_448186.1| - 0.017 14.8 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain AAA_28 PF13521.1 gi|84489954|ref|YP_448186.1| - 0.021 14.7 0.0 0.051 13.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|84489954|ref|YP_448186.1| - 0.031 14.2 0.0 0.069 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|84489954|ref|YP_448186.1| - 0.033 14.3 0.0 0.5 10.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|84489954|ref|YP_448186.1| - 0.075 12.9 0.0 0.075 12.9 0.0 2.9 3 0 0 3 3 3 0 AAA domain Viral_helicase1 PF01443.13 gi|84489954|ref|YP_448186.1| - 0.079 12.4 0.0 0.18 11.3 0.0 1.6 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_29 PF13555.1 gi|84489954|ref|YP_448186.1| - 0.13 11.8 0.0 0.3 10.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SF PF00482.18 gi|84489955|ref|YP_448187.1| - 2.1e-18 66.4 0.2 2.1e-18 66.4 0.2 2.3 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F DUF2207 PF09972.4 gi|84489955|ref|YP_448187.1| - 0.023 13.3 10.3 0.063 11.8 2.6 2.3 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Glycophorin_A PF01102.13 gi|84489955|ref|YP_448187.1| - 0.27 10.9 2.9 0.51 10.1 0.1 2.2 2 0 0 2 2 2 0 Glycophorin A Tetraspannin PF00335.15 gi|84489955|ref|YP_448187.1| - 0.37 10.0 7.9 10 5.2 4.0 2.2 2 0 0 2 2 2 0 Tetraspanin family CbiQ PF02361.11 gi|84489955|ref|YP_448187.1| - 3.1 7.3 16.4 6 6.3 7.4 2.1 2 0 0 2 2 2 0 Cobalt transport protein NMT1_2 PF13379.1 gi|84489956|ref|YP_448188.1| - 1.7e-41 142.3 0.1 2.1e-41 142.0 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|84489956|ref|YP_448188.1| - 3e-30 105.4 0.5 4e-30 105.0 0.3 1.1 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|84489956|ref|YP_448188.1| - 2.5e-11 43.4 0.1 3.1e-11 43.1 0.1 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein OpuAC PF04069.7 gi|84489956|ref|YP_448188.1| - 9.8e-11 41.4 0.1 1.6e-10 40.7 0.1 1.4 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system SBP_bac_3 PF00497.15 gi|84489956|ref|YP_448188.1| - 1.1e-09 37.9 0.0 2e-09 37.0 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lipoprotein_9 PF03180.9 gi|84489956|ref|YP_448188.1| - 2e-06 26.9 0.4 3e-06 26.3 0.3 1.4 1 0 0 1 1 1 1 NLPA lipoprotein SBP_bac_1 PF01547.20 gi|84489956|ref|YP_448188.1| - 4.8e-05 23.2 0.3 0.013 15.2 0.0 2.2 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein ABC2_membrane_3 PF12698.2 gi|84489956|ref|YP_448188.1| - 0.00033 19.8 2.4 0.00044 19.3 1.7 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein PBP_like PF12727.2 gi|84489956|ref|YP_448188.1| - 0.034 13.0 0.0 0.23 10.3 0.0 2.0 1 1 1 2 2 2 0 PBP superfamily domain HD PF01966.17 gi|84489957|ref|YP_448189.1| - 1.1e-13 51.2 0.7 1.1e-13 51.2 0.5 1.8 2 0 0 2 2 2 1 HD domain tRNA_anti-codon PF01336.20 gi|84489957|ref|YP_448189.1| - 9.4e-06 25.4 0.2 3e-05 23.7 0.0 1.8 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain TraI_2 PF07514.6 gi|84489957|ref|YP_448189.1| - 9.4e-05 21.3 0.0 0.00056 18.7 0.0 1.9 2 0 0 2 2 2 1 Putative helicase PPP5 PF08321.7 gi|84489957|ref|YP_448189.1| - 0.029 14.3 5.9 0.049 13.6 0.7 2.9 2 1 1 3 3 3 0 PPP5 TPR repeat region NAD_binding_5 PF07994.7 gi|84489958|ref|YP_448190.1| - 4.3e-56 190.5 0.0 1.3e-55 189.0 0.0 1.6 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.12 gi|84489958|ref|YP_448190.1| - 6.5e-33 112.9 0.0 1.7e-32 111.5 0.0 1.7 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF2982 PF11201.3 gi|84489958|ref|YP_448190.1| - 0.019 14.3 0.0 0.036 13.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2982) Trm56 PF01994.11 gi|84489959|ref|YP_448191.1| - 2.2e-49 166.2 0.2 3.1e-49 165.7 0.1 1.2 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.14 gi|84489959|ref|YP_448191.1| - 0.00057 19.7 0.0 0.00075 19.3 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family CobA_CobO_BtuR PF02572.10 gi|84489959|ref|YP_448191.1| - 0.016 14.8 0.1 0.043 13.4 0.0 1.7 2 0 0 2 2 2 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Cellulase PF00150.13 gi|84489959|ref|YP_448191.1| - 0.017 14.3 0.1 0.13 11.4 0.0 1.9 1 1 1 2 2 2 0 Cellulase (glycosyl hydrolase family 5) CobS PF02654.10 gi|84489960|ref|YP_448192.1| - 3.6e-61 206.7 15.0 4.2e-61 206.5 10.4 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase DUF4117 PF13491.1 gi|84489960|ref|YP_448192.1| - 0.0082 15.6 7.1 0.02 14.3 4.5 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4117) DUF1980 PF09323.5 gi|84489960|ref|YP_448192.1| - 0.35 10.6 4.0 0.9 9.2 2.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Sof1 PF04158.9 gi|84489961|ref|YP_448193.1| - 0.042 13.8 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 Sof1-like domain Viral_helicase1 PF01443.13 gi|84489961|ref|YP_448193.1| - 0.079 12.4 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF111 PF01969.12 gi|84489962|ref|YP_448194.1| - 5e-123 410.6 0.6 5.7e-123 410.4 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 DUF1647 PF07801.6 gi|84489962|ref|YP_448194.1| - 0.057 12.9 0.3 0.14 11.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) QueC PF06508.8 gi|84489963|ref|YP_448195.1| - 3.9e-66 222.3 0.5 4.5e-66 222.1 0.4 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|84489963|ref|YP_448195.1| - 7.9e-07 28.7 0.5 0.0038 16.7 0.0 2.6 2 1 0 2 2 2 2 Thiamine biosynthesis protein (ThiI) ATP_bind_3 PF01171.15 gi|84489963|ref|YP_448195.1| - 2.4e-06 27.1 0.0 0.00011 21.7 0.0 2.2 2 0 0 2 2 2 1 PP-loop family NAD_synthase PF02540.12 gi|84489963|ref|YP_448195.1| - 5.9e-06 25.3 0.0 3.2e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 NAD synthase Asn_synthase PF00733.16 gi|84489963|ref|YP_448195.1| - 2.5e-05 23.8 0.0 3.7e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.11 gi|84489963|ref|YP_448195.1| - 0.0027 16.3 0.0 0.0045 15.5 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase Arginosuc_synth PF00764.14 gi|84489963|ref|YP_448195.1| - 0.018 14.1 0.0 0.028 13.4 0.0 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase DUF3067 PF11267.3 gi|84489963|ref|YP_448195.1| - 0.13 12.4 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3067) DUF2284 PF10050.4 gi|84489964|ref|YP_448196.1| - 2.8e-28 98.5 0.2 3.4e-28 98.3 0.1 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Flu_PB1 PF00602.12 gi|84489964|ref|YP_448196.1| - 0.0021 15.8 0.0 0.0027 15.5 0.0 1.3 1 0 0 1 1 1 1 Influenza RNA-dependent RNA polymerase subunit PB1 PYC_OADA PF02436.13 gi|84489965|ref|YP_448197.1| - 4.3e-64 215.5 0.8 7.3e-64 214.8 0.5 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.14 gi|84489965|ref|YP_448197.1| - 3.3e-43 148.0 0.1 5.6e-43 147.3 0.0 1.4 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.17 gi|84489965|ref|YP_448197.1| - 9e-20 70.0 4.5 2.1e-19 68.9 3.1 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|84489965|ref|YP_448197.1| - 1.6e-09 37.3 1.7 0.00086 18.9 0.1 2.8 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_2 PF12700.2 gi|84489965|ref|YP_448197.1| - 1.6e-07 30.7 1.7 0.0037 16.4 0.0 2.7 1 1 1 2 2 2 2 HlyD family secretion protein HlyD PF00529.15 gi|84489965|ref|YP_448197.1| - 8.6e-05 21.9 1.3 0.19 10.9 0.1 2.5 1 1 1 2 2 2 2 HlyD family secretion protein HlyD_3 PF13437.1 gi|84489965|ref|YP_448197.1| - 0.0016 18.7 0.2 2.6 8.4 0.0 3.2 3 0 0 3 3 3 2 HlyD family secretion protein GCV_H PF01597.14 gi|84489965|ref|YP_448197.1| - 0.0027 17.3 0.4 0.0088 15.7 0.3 1.9 1 0 0 1 1 1 1 Glycine cleavage H-protein DUF2118 PF09891.4 gi|84489965|ref|YP_448197.1| - 0.01 15.5 0.2 0.036 13.7 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2118) PYNP_C PF07831.8 gi|84489965|ref|YP_448197.1| - 0.017 14.5 1.1 0.65 9.4 0.1 2.6 2 0 0 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain RnfC_N PF13375.1 gi|84489965|ref|YP_448197.1| - 0.02 14.5 0.2 0.065 12.9 0.1 1.9 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Ribosomal_L37e PF01907.14 gi|84489966|ref|YP_448198.1| - 1.9e-28 97.9 10.6 2.2e-28 97.7 7.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.2 gi|84489966|ref|YP_448198.1| - 0.00074 19.2 2.7 0.001 18.8 1.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|84489966|ref|YP_448198.1| - 0.0022 17.1 3.3 0.0031 16.6 2.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|84489966|ref|YP_448198.1| - 0.0089 15.8 2.5 0.011 15.5 1.7 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like IGFL PF14653.1 gi|84489966|ref|YP_448198.1| - 0.012 15.6 2.3 0.013 15.5 1.6 1.2 1 0 0 1 1 1 0 Insulin growth factor-like family Stc1 PF12898.2 gi|84489966|ref|YP_448198.1| - 0.014 15.4 0.8 0.014 15.3 0.5 1.1 1 0 0 1 1 1 0 Stc1 domain GCC2_GCC3 PF07699.8 gi|84489966|ref|YP_448198.1| - 0.018 14.5 3.5 0.025 14.1 2.4 1.3 1 0 0 1 1 1 0 GCC2 and GCC3 SelR PF01641.13 gi|84489966|ref|YP_448198.1| - 0.064 12.9 0.2 0.064 12.9 0.2 1.1 1 0 0 1 1 1 0 SelR domain Cript PF10235.4 gi|84489966|ref|YP_448198.1| - 0.086 13.2 2.3 0.12 12.7 1.6 1.2 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT Rep_fac-A_C PF08646.5 gi|84489966|ref|YP_448198.1| - 0.11 12.1 0.6 0.12 12.1 0.4 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain zinc_ribbon_2 PF13240.1 gi|84489966|ref|YP_448198.1| - 0.12 11.8 5.5 0.27 10.7 3.6 1.8 1 1 1 2 2 2 0 zinc-ribbon domain zf-dskA_traR PF01258.12 gi|84489966|ref|YP_448198.1| - 0.21 11.3 3.5 0.45 10.2 2.1 1.9 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger HypA PF01155.14 gi|84489966|ref|YP_448198.1| - 0.25 11.0 0.8 0.31 10.7 0.6 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-C3HC4 PF00097.20 gi|84489966|ref|YP_448198.1| - 1.3 8.7 4.4 1.9 8.2 3.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DNA_RNApol_7kD PF03604.8 gi|84489966|ref|YP_448198.1| - 2.3 7.7 8.6 0.58 9.6 1.3 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2_3 PF13878.1 gi|84489966|ref|YP_448198.1| - 3.4 7.3 5.0 13 5.3 0.5 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO LSM PF01423.17 gi|84489967|ref|YP_448199.1| - 2.8e-22 78.0 0.0 3.5e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.1 gi|84489967|ref|YP_448199.1| - 0.005 16.7 0.0 0.0074 16.1 0.0 1.3 1 0 0 1 1 1 1 Ataxin 2 SM domain PUA PF01472.15 gi|84489968|ref|YP_448200.1| - 5.4e-17 61.2 1.0 8.5e-17 60.6 0.7 1.3 1 0 0 1 1 1 1 PUA domain Creatininase PF02633.9 gi|84489969|ref|YP_448201.1| - 3.5e-15 55.7 0.1 5.3e-15 55.1 0.0 1.4 1 1 0 1 1 1 1 Creatinine amidohydrolase ATP-synt_E PF05680.7 gi|84489969|ref|YP_448201.1| - 0.074 13.0 0.0 0.38 10.7 0.0 2.1 2 0 0 2 2 2 0 ATP synthase E chain DEAD PF00270.24 gi|84489970|ref|YP_448202.1| - 1.2e-29 102.9 0.7 1e-28 99.9 0.1 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|84489970|ref|YP_448202.1| - 5.1e-10 39.0 0.0 1.3e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|84489970|ref|YP_448202.1| - 2.4e-09 37.2 0.1 2.4e-09 37.2 0.1 2.7 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit SecA_DEAD PF07517.9 gi|84489970|ref|YP_448202.1| - 0.0015 17.8 0.2 0.011 15.0 0.0 2.1 2 1 0 2 2 2 1 SecA DEAD-like domain CbiC PF02570.10 gi|84489971|ref|YP_448203.1| - 6.9e-66 221.4 0.7 7.7e-66 221.2 0.5 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase Phage-MuB_C PF09077.6 gi|84489971|ref|YP_448203.1| - 0.066 12.8 0.1 0.13 11.9 0.1 1.6 1 0 0 1 1 1 0 Mu B transposition protein, C terminal Aminotran_3 PF00202.16 gi|84489972|ref|YP_448204.1| - 7e-65 219.0 0.0 8.9e-65 218.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|84489972|ref|YP_448204.1| - 0.0026 16.7 0.0 0.0031 16.5 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II PTA_PTB PF01515.14 gi|84489973|ref|YP_448205.1| - 2.2e-07 30.2 0.0 3.1e-05 23.1 0.0 2.5 3 0 0 3 3 3 2 Phosphate acetyl/butaryl transferase FA_synthesis PF02504.10 gi|84489973|ref|YP_448205.1| - 0.088 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Fatty acid synthesis protein Prenyltransf PF01255.14 gi|84489974|ref|YP_448206.1| - 1.8e-84 282.3 0.5 2.1e-84 282.1 0.3 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase TatD_DNase PF01026.16 gi|84489975|ref|YP_448207.1| - 7.9e-64 215.3 0.8 8.8e-64 215.1 0.6 1.0 1 0 0 1 1 1 1 TatD related DNase PIG-X PF08320.7 gi|84489975|ref|YP_448207.1| - 0.057 12.7 0.1 0.083 12.1 0.1 1.2 1 0 0 1 1 1 0 PIG-X / PBN1 DUF2408 PF10303.4 gi|84489975|ref|YP_448207.1| - 0.11 12.5 1.7 0.5 10.4 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2408) tRNA-synt_1 PF00133.17 gi|84489976|ref|YP_448208.1| - 0.00047 18.3 0.2 0.00049 18.2 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) RibD_C PF01872.12 gi|84489977|ref|YP_448209.1| - 2.3e-55 187.3 0.0 2.5e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DUF1533 PF07550.6 gi|84489977|ref|YP_448209.1| - 0.056 13.4 4.7 0.11 12.5 0.7 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1533) PHP PF02811.14 gi|84489978|ref|YP_448210.1| - 6.7e-14 52.0 0.2 7.2e-14 51.9 0.1 1.2 1 0 0 1 1 1 1 PHP domain DUF3773 PF12608.3 gi|84489978|ref|YP_448210.1| - 0.022 14.7 0.0 0.63 10.1 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3773) RNase_P_p30 PF01876.11 gi|84489978|ref|YP_448210.1| - 0.029 13.6 0.0 0.07 12.3 0.0 1.6 1 1 0 1 1 1 0 RNase P subunit p30 DUF1471 PF07338.8 gi|84489978|ref|YP_448210.1| - 0.029 13.9 0.0 3.8 7.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1471) GHMP_kinases_N PF00288.21 gi|84489979|ref|YP_448211.1| - 4.7e-07 29.7 0.7 9.6e-07 28.7 0.3 1.7 2 0 0 2 2 2 1 GHMP kinases N terminal domain Binary_toxB PF03495.9 gi|84489979|ref|YP_448211.1| - 0.0064 15.1 0.6 0.011 14.4 0.4 1.3 1 0 0 1 1 1 1 Clostridial binary toxin B/anthrax toxin PA HTH_24 PF13412.1 gi|84489980|ref|YP_448212.1| - 1.7e-13 49.7 0.1 5.3e-11 41.7 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|84489980|ref|YP_448212.1| - 1.7e-09 37.2 0.1 5e-07 29.3 0.0 2.3 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.2 gi|84489980|ref|YP_448212.1| - 2.1e-09 36.9 0.0 6.4e-09 35.3 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.7 gi|84489980|ref|YP_448212.1| - 6.6e-06 25.6 0.1 1.7e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 HTH domain HTH_Crp_2 PF13545.1 gi|84489980|ref|YP_448212.1| - 1.2e-05 25.0 0.0 9e-05 22.1 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.1 gi|84489980|ref|YP_448212.1| - 5e-05 23.5 0.0 0.0001 22.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|84489980|ref|YP_448212.1| - 0.00013 21.6 0.2 0.0041 16.7 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|84489980|ref|YP_448212.1| - 0.00021 20.7 0.0 0.00053 19.5 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.15 gi|84489980|ref|YP_448212.1| - 0.00041 19.9 0.0 0.00092 18.8 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.14 gi|84489980|ref|YP_448212.1| - 0.0013 18.6 0.0 0.0031 17.4 0.0 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.1 gi|84489980|ref|YP_448212.1| - 0.0017 18.3 0.3 0.0069 16.4 0.1 2.1 2 1 0 2 2 2 1 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|84489980|ref|YP_448212.1| - 0.002 18.2 0.0 0.012 15.7 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|84489980|ref|YP_448212.1| - 0.0072 15.9 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_20 PF12840.2 gi|84489980|ref|YP_448212.1| - 0.01 15.5 0.0 0.071 12.9 0.0 2.2 2 1 1 3 3 3 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|84489980|ref|YP_448212.1| - 0.011 15.8 0.0 0.043 13.9 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator GntR PF00392.16 gi|84489980|ref|YP_448212.1| - 0.015 14.7 0.0 0.046 13.1 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.11 gi|84489980|ref|YP_448212.1| - 0.07 12.7 0.0 0.66 9.5 0.0 2.4 3 0 0 3 3 3 0 LexA DNA binding domain DUF1389 PF07146.6 gi|84489980|ref|YP_448212.1| - 0.075 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1389) HTH_3 PF01381.17 gi|84489980|ref|YP_448212.1| - 0.076 12.8 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_45 PF14947.1 gi|84489980|ref|YP_448212.1| - 0.08 12.7 1.1 0.19 11.5 0.3 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DUF2023 PF09633.5 gi|84489980|ref|YP_448212.1| - 0.089 12.7 0.1 0.7 9.8 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2023) Sigma70_r4_2 PF08281.7 gi|84489980|ref|YP_448212.1| - 0.14 11.6 0.0 0.37 10.2 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 DHHA1 PF02272.14 gi|84489981|ref|YP_448213.1| - 6.2e-13 48.2 0.0 1.3e-12 47.2 0.0 1.6 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|84489981|ref|YP_448213.1| - 1.6e-11 44.0 0.2 2.9e-11 43.1 0.2 1.4 1 0 0 1 1 1 1 DHH family CDC45 PF02724.9 gi|84489981|ref|YP_448213.1| - 0.062 11.3 0.2 0.083 10.9 0.1 1.1 1 0 0 1 1 1 0 CDC45-like protein PPR PF01535.15 gi|84489981|ref|YP_448213.1| - 0.087 12.8 0.1 0.23 11.5 0.0 1.8 1 0 0 1 1 1 0 PPR repeat SRP19 PF01922.12 gi|84489982|ref|YP_448214.1| - 7.9e-29 100.0 0.3 8.8e-29 99.9 0.2 1.0 1 0 0 1 1 1 1 SRP19 protein HEM4 PF02602.10 gi|84489983|ref|YP_448215.1| - 1.3e-46 158.7 0.0 1.5e-46 158.5 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD TP_methylase PF00590.15 gi|84489984|ref|YP_448216.1| - 5.2e-45 153.7 0.0 6e-45 153.5 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases GATase_5 PF13507.1 gi|84489985|ref|YP_448217.1| - 1.7e-41 141.8 0.0 2.5e-41 141.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|84489985|ref|YP_448217.1| - 1.7e-08 34.1 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|84489985|ref|YP_448217.1| - 8.3e-08 31.9 0.0 1.6e-07 31.0 0.0 1.6 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.19 gi|84489985|ref|YP_448217.1| - 4e-07 29.5 0.0 5.6e-07 29.1 0.0 1.3 1 1 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|84489985|ref|YP_448217.1| - 0.00053 19.3 0.0 0.00085 18.6 0.0 1.3 1 0 0 1 1 1 1 Putative amidotransferase SNO PF01174.14 gi|84489985|ref|YP_448217.1| - 0.00084 19.0 0.0 0.0021 17.7 0.0 1.7 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|84489985|ref|YP_448217.1| - 0.13 11.6 0.1 0.3 10.4 0.0 1.8 2 1 0 2 2 2 0 Peptidase C26 PurS PF02700.9 gi|84489986|ref|YP_448218.1| - 2.3e-27 94.7 0.7 2.6e-27 94.5 0.5 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase RYDR_ITPR PF01365.16 gi|84489986|ref|YP_448218.1| - 0.032 13.4 0.1 0.039 13.1 0.1 1.0 1 0 0 1 1 1 0 RIH domain SAICAR_synt PF01259.13 gi|84489987|ref|YP_448219.1| - 5.7e-60 202.4 1.3 7.1e-60 202.1 0.9 1.0 1 0 0 1 1 1 1 SAICAR synthetase TM1506 PF08973.5 gi|84489987|ref|YP_448219.1| - 0.1 12.1 0.3 0.38 10.2 0.0 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1893) SIS PF01380.17 gi|84489988|ref|YP_448220.1| - 9.9e-45 151.3 0.2 4.2e-26 91.1 0.6 2.3 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.1 gi|84489988|ref|YP_448220.1| - 6.6e-25 87.6 0.0 1.2e-24 86.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|84489988|ref|YP_448220.1| - 1.8e-21 76.1 0.0 3.4e-21 75.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|84489988|ref|YP_448220.1| - 4.5e-21 74.9 0.0 3.2e-17 62.2 0.0 2.3 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_4 PF13230.1 gi|84489988|ref|YP_448220.1| - 4e-07 28.9 0.1 6.7e-07 28.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF3510 PF12022.3 gi|84489988|ref|YP_448220.1| - 0.016 15.3 1.0 0.35 10.9 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3510) 4HBT_2 PF13279.1 gi|84489990|ref|YP_448222.1| - 7.5e-10 39.3 0.1 1e-09 38.8 0.1 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.17 gi|84489990|ref|YP_448222.1| - 8.4e-08 32.2 0.0 1.3e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily Amidohydro_1 PF01979.15 gi|84489991|ref|YP_448223.1| - 2.1e-24 86.8 0.1 3.5e-24 86.0 0.1 1.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|84489991|ref|YP_448223.1| - 1.1e-09 37.9 0.2 9.1e-09 35.0 0.1 2.4 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|84489991|ref|YP_448223.1| - 1.8e-07 31.4 0.0 5.7e-05 23.2 0.0 2.6 1 1 0 1 1 1 1 Amidohydrolase A_deaminase PF00962.17 gi|84489991|ref|YP_448223.1| - 0.0044 15.9 0.0 0.006 15.5 0.0 1.4 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.6 gi|84489991|ref|YP_448223.1| - 0.15 11.2 0.1 12 4.9 0.0 3.0 1 1 1 2 2 2 0 Amidohydrolase family CPSase_L_D2 PF02786.12 gi|84489992|ref|YP_448224.1| - 1.5e-113 377.3 0.2 1.7e-74 249.6 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|84489992|ref|YP_448224.1| - 1.1e-48 163.8 0.1 4.1e-24 84.7 0.1 2.6 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, N-terminal domain CPSase_L_D3 PF02787.14 gi|84489992|ref|YP_448224.1| - 6.6e-47 158.2 0.8 1.8e-46 156.9 0.6 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp_4 PF13535.1 gi|84489992|ref|YP_448224.1| - 4.5e-41 140.5 0.2 2.2e-19 69.9 0.0 2.6 3 0 0 3 3 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|84489992|ref|YP_448224.1| - 1.3e-34 119.4 0.0 2.2e-14 52.9 0.0 4.1 3 1 0 3 3 3 3 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.17 gi|84489992|ref|YP_448224.1| - 2.9e-20 72.3 0.0 6.8e-11 41.8 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain MGS PF02142.17 gi|84489992|ref|YP_448224.1| - 6.3e-17 61.2 0.1 8.1e-16 57.7 0.0 2.9 3 0 0 3 3 3 1 MGS-like domain Dala_Dala_lig_C PF07478.8 gi|84489992|ref|YP_448224.1| - 2.1e-14 53.3 2.1 2.9e-06 26.8 0.0 3.0 3 1 0 3 3 3 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|84489992|ref|YP_448224.1| - 1.7e-13 50.7 0.6 3.8e-07 30.1 0.1 2.4 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.14 gi|84489992|ref|YP_448224.1| - 1.9e-10 40.6 0.1 2.7e-05 23.8 0.0 2.4 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Jag_N PF14804.1 gi|84489992|ref|YP_448224.1| - 0.0045 16.9 0.1 0.022 14.7 0.1 2.3 1 0 0 1 1 1 1 Jag N-terminus ATP-grasp_5 PF13549.1 gi|84489992|ref|YP_448224.1| - 0.006 15.8 0.0 2.9 7.0 0.0 2.7 2 0 0 2 2 2 2 ATP-grasp domain Peripla_BP_6 PF13458.1 gi|84489992|ref|YP_448224.1| - 0.019 14.3 0.0 0.83 8.9 0.0 2.5 2 0 0 2 2 2 0 Periplasmic binding protein PrpR_N PF06506.6 gi|84489992|ref|YP_448224.1| - 0.045 13.1 0.0 18 4.7 0.0 3.6 3 0 0 3 3 3 0 Propionate catabolism activator HTH_23 PF13384.1 gi|84489992|ref|YP_448224.1| - 0.098 12.3 0.0 35 4.2 0.0 3.4 3 0 0 3 3 3 0 Homeodomain-like domain TrkA_N PF02254.13 gi|84489992|ref|YP_448224.1| - 1.1 9.2 4.8 24 4.9 0.2 3.5 3 1 0 3 3 3 0 TrkA-N domain CPSase_sm_chain PF00988.17 gi|84489993|ref|YP_448225.1| - 2.5e-48 162.9 0.0 4.2e-48 162.1 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.23 gi|84489993|ref|YP_448225.1| - 6.2e-42 143.2 0.0 9.1e-42 142.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|84489993|ref|YP_448225.1| - 1e-08 34.9 1.4 5.8e-06 25.9 0.9 3.1 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.19 gi|84489993|ref|YP_448225.1| - 0.014 14.9 0.0 0.026 13.9 0.0 1.5 1 0 0 1 1 1 0 DJ-1/PfpI family Acetyltransf_1 PF00583.19 gi|84489994|ref|YP_448226.1| - 3.3e-14 52.6 0.0 4.5e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|84489994|ref|YP_448226.1| - 7.9e-10 38.7 0.3 1e-09 38.3 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|84489994|ref|YP_448226.1| - 3.1e-08 33.7 1.1 4.4e-08 33.2 0.8 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|84489994|ref|YP_448226.1| - 2.9e-07 30.6 0.0 3.6e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|84489994|ref|YP_448226.1| - 5.1e-05 23.2 0.1 0.00011 22.0 0.1 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|84489994|ref|YP_448226.1| - 0.0021 17.7 0.2 0.0055 16.4 0.0 1.7 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_3 PF13302.1 gi|84489994|ref|YP_448226.1| - 0.0091 16.1 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|84489994|ref|YP_448226.1| - 0.03 14.2 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain UPF0146 PF03686.8 gi|84489995|ref|YP_448227.1| - 3.4e-32 110.9 0.2 3.9e-32 110.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) E1-E2_ATPase PF00122.15 gi|84489996|ref|YP_448228.1| - 6.2e-78 260.9 7.2 6.2e-78 260.9 5.0 3.1 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|84489996|ref|YP_448228.1| - 4.2e-43 146.9 11.1 4.2e-43 146.9 7.7 2.7 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|84489996|ref|YP_448228.1| - 9.8e-37 127.4 1.4 2.7e-36 126.0 0.2 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|84489996|ref|YP_448228.1| - 5.9e-21 73.7 0.2 1.3e-20 72.6 0.2 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_like2 PF13246.1 gi|84489996|ref|YP_448228.1| - 9.7e-17 60.7 0.4 4.4e-16 58.6 0.0 2.3 2 0 0 2 2 2 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|84489996|ref|YP_448228.1| - 1.7e-16 60.9 0.2 3.5e-16 59.9 0.1 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|84489996|ref|YP_448228.1| - 4.6e-06 26.3 1.1 4.6e-06 26.3 0.7 4.0 3 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase Ribosomal_S13 PF00416.17 gi|84489996|ref|YP_448228.1| - 3.7 8.0 11.8 4.2 7.8 0.2 4.2 4 1 1 5 5 5 0 Ribosomal protein S13/S18 CbiJ PF02571.9 gi|84489997|ref|YP_448229.1| - 2.4e-53 181.0 0.1 2.7e-53 180.8 0.1 1.0 1 0 0 1 1 1 1 Precorrin-6x reductase CbiJ/CobK SpoU_sub_bind PF08032.7 gi|84489997|ref|YP_448229.1| - 0.00011 22.2 1.7 0.71 10.0 0.0 3.2 3 1 0 3 3 3 2 RNA 2'-O ribose methyltransferase substrate binding AAA PF00004.24 gi|84489998|ref|YP_448230.1| - 1.4e-46 157.9 0.2 6.8e-46 155.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|84489998|ref|YP_448230.1| - 7e-09 35.8 0.0 1.8e-08 34.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.9 gi|84489998|ref|YP_448230.1| - 8.9e-08 31.9 0.6 2.6e-06 27.1 0.0 3.2 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|84489998|ref|YP_448230.1| - 8.8e-06 24.9 0.2 2.1e-05 23.7 0.0 1.7 2 0 0 2 2 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|84489998|ref|YP_448230.1| - 1e-05 25.6 0.1 0.00069 19.7 0.1 2.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|84489998|ref|YP_448230.1| - 1.2e-05 25.3 0.0 0.00078 19.4 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_17 PF13207.1 gi|84489998|ref|YP_448230.1| - 4.8e-05 24.1 0.2 0.00016 22.5 0.0 2.0 2 0 0 2 2 1 1 AAA domain AAA_28 PF13521.1 gi|84489998|ref|YP_448230.1| - 0.00081 19.3 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|84489998|ref|YP_448230.1| - 0.0011 18.4 0.4 0.0025 17.2 0.1 1.7 2 0 0 2 2 1 1 IstB-like ATP binding protein TIP49 PF06068.8 gi|84489998|ref|YP_448230.1| - 0.0013 17.5 0.0 0.0027 16.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 C-terminus DUF815 PF05673.8 gi|84489998|ref|YP_448230.1| - 0.0014 17.6 0.0 0.0027 16.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_14 PF13173.1 gi|84489998|ref|YP_448230.1| - 0.0017 18.2 0.0 0.0056 16.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain Bac_DnaA PF00308.13 gi|84489998|ref|YP_448230.1| - 0.0019 17.9 0.4 0.14 11.7 0.0 3.2 2 2 0 2 2 2 1 Bacterial dnaA protein AAA_19 PF13245.1 gi|84489998|ref|YP_448230.1| - 0.0022 17.7 0.2 0.006 16.3 0.1 1.7 1 0 0 1 1 1 1 Part of AAA domain Mg_chelatase PF01078.16 gi|84489998|ref|YP_448230.1| - 0.0024 17.0 0.1 0.016 14.3 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.1 gi|84489998|ref|YP_448230.1| - 0.005 16.7 0.0 0.0099 15.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|84489998|ref|YP_448230.1| - 0.0065 15.9 0.7 0.066 12.6 0.1 2.4 1 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.17 gi|84489998|ref|YP_448230.1| - 0.0088 16.2 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase Zeta_toxin PF06414.7 gi|84489998|ref|YP_448230.1| - 0.0089 15.1 0.2 0.031 13.3 0.0 1.9 2 0 0 2 2 2 1 Zeta toxin Sigma54_activat PF00158.21 gi|84489998|ref|YP_448230.1| - 0.0096 15.4 0.1 0.18 11.2 0.1 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain Parvo_NS1 PF01057.12 gi|84489998|ref|YP_448230.1| - 0.01 14.7 0.0 0.027 13.3 0.0 1.7 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_24 PF13479.1 gi|84489998|ref|YP_448230.1| - 0.017 14.7 0.1 0.038 13.5 0.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|84489998|ref|YP_448230.1| - 0.018 15.3 3.5 0.035 14.4 0.0 2.7 3 0 0 3 3 2 0 AAA domain AAA_3 PF07726.6 gi|84489998|ref|YP_448230.1| - 0.026 14.1 0.0 0.24 11.0 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.1 gi|84489998|ref|YP_448230.1| - 0.029 13.9 0.3 0.36 10.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain Arch_ATPase PF01637.13 gi|84489998|ref|YP_448230.1| - 0.032 13.9 0.6 0.19 11.4 0.0 2.3 2 0 0 2 2 2 0 Archaeal ATPase NACHT PF05729.7 gi|84489998|ref|YP_448230.1| - 0.039 13.6 0.1 0.94 9.1 0.0 2.3 1 1 1 2 2 2 0 NACHT domain PhoH PF02562.11 gi|84489998|ref|YP_448230.1| - 0.04 13.1 0.1 0.094 11.9 0.1 1.6 1 0 0 1 1 1 0 PhoH-like protein Torsin PF06309.6 gi|84489998|ref|YP_448230.1| - 0.051 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Torsin Sigma54_activ_2 PF14532.1 gi|84489998|ref|YP_448230.1| - 0.071 13.1 0.0 0.17 11.9 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain G-gamma PF00631.17 gi|84489998|ref|YP_448230.1| - 0.088 12.5 0.2 5 6.9 0.0 2.4 2 0 0 2 2 2 0 GGL domain DUF972 PF06156.8 gi|84489998|ref|YP_448230.1| - 0.81 10.0 4.5 1.8 8.9 0.7 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF972) KaiC PF06745.8 gi|84489998|ref|YP_448230.1| - 1.5 7.8 6.5 0.5 9.4 0.0 3.0 3 1 1 4 4 4 0 KaiC AAA_23 PF13476.1 gi|84489998|ref|YP_448230.1| - 1.5 9.1 6.0 2.9 8.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain HTH_3 PF01381.17 gi|84489999|ref|YP_448231.1| - 3e-09 36.5 0.3 5.1e-09 35.8 0.1 1.5 1 1 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|84489999|ref|YP_448231.1| - 1.5e-06 28.1 1.5 4.3e-06 26.6 1.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|84489999|ref|YP_448231.1| - 0.0066 16.0 3.6 0.032 13.8 0.1 2.4 2 1 0 2 2 2 1 Helix-turn-helix domain Arc_trans_TRASH PF08394.5 gi|84489999|ref|YP_448231.1| - 0.014 15.5 3.5 0.048 13.8 2.4 2.0 1 0 0 1 1 1 0 Archaeal TRASH domain HTH_31 PF13560.1 gi|84489999|ref|YP_448231.1| - 0.037 14.2 0.0 0.057 13.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF164 PF02591.10 gi|84489999|ref|YP_448231.1| - 0.4 10.5 3.5 0.29 10.9 0.9 1.9 2 0 0 2 2 2 0 Putative zinc ribbon domain bZIP_Maf PF03131.12 gi|84489999|ref|YP_448231.1| - 2.9 8.2 11.9 0.48 10.7 5.4 1.8 2 1 0 2 2 2 0 bZIP Maf transcription factor DUF356 PF04009.7 gi|84490000|ref|YP_448232.1| - 5.2e-40 135.8 3.3 6.1e-40 135.6 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Mur_ligase_M PF08245.7 gi|84490003|ref|YP_448235.1| - 1e-31 110.4 0.2 3.3e-31 108.7 0.1 1.9 1 1 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.16 gi|84490003|ref|YP_448235.1| - 6.7e-07 29.2 0.0 1.8e-06 27.8 0.0 1.7 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.7 gi|84490004|ref|YP_448236.1| - 4.7e-18 65.9 0.1 9e-18 64.9 0.1 1.5 1 0 0 1 1 1 1 Mur ligase middle domain NAD_binding_7 PF13241.1 gi|84490004|ref|YP_448236.1| - 0.006 16.8 0.0 0.016 15.4 0.0 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding Mur_ligase_C PF02875.16 gi|84490004|ref|YP_448236.1| - 0.011 15.7 0.0 0.039 13.9 0.0 1.9 2 0 0 2 2 2 0 Mur ligase family, glutamate ligase domain NAD_Gly3P_dh_N PF01210.18 gi|84490004|ref|YP_448236.1| - 0.031 13.9 0.1 0.36 10.5 0.0 2.5 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.14 gi|84490004|ref|YP_448236.1| - 0.039 12.9 0.0 0.055 12.5 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain Shikimate_DH PF01488.15 gi|84490004|ref|YP_448236.1| - 0.067 13.3 0.2 0.3 11.2 0.1 2.1 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.1 gi|84490004|ref|YP_448236.1| - 0.091 13.0 0.0 0.22 11.8 0.0 1.7 1 1 0 1 1 1 0 XdhC Rossmann domain NAD_binding_10 PF13460.1 gi|84490004|ref|YP_448236.1| - 0.092 12.7 0.0 0.24 11.3 0.0 1.8 1 0 0 1 1 1 0 NADH(P)-binding Mur_ligase_M PF08245.7 gi|84490005|ref|YP_448237.1| - 9.5e-18 64.9 1.9 1.6e-17 64.1 1.3 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.16 gi|84490005|ref|YP_448237.1| - 0.00051 20.0 0.1 0.018 15.0 0.0 3.4 4 1 1 5 5 5 1 Mur ligase family, glutamate ligase domain Fe-S_assembly PF04384.8 gi|84490005|ref|YP_448237.1| - 0.14 12.5 1.0 12 6.3 0.3 3.0 3 0 0 3 3 3 0 Iron-sulphur cluster assembly Pyr_redox PF00070.22 gi|84490005|ref|YP_448237.1| - 0.71 10.3 4.7 10 6.5 0.1 3.9 4 1 1 5 5 5 0 Pyridine nucleotide-disulphide oxidoreductase Glycos_transf_4 PF00953.16 gi|84490006|ref|YP_448238.1| - 1.2e-29 103.2 10.7 1.2e-29 103.2 7.4 3.7 3 1 1 4 4 4 2 Glycosyl transferase family 4 MraY_sig1 PF10555.4 gi|84490006|ref|YP_448238.1| - 0.00098 18.2 2.5 0.0029 16.7 1.7 1.9 1 0 0 1 1 1 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ATPgrasp_Ter PF15632.1 gi|84490007|ref|YP_448239.1| - 2.3e-21 75.9 0.0 6.4e-20 71.1 0.0 2.2 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_4 PF13535.1 gi|84490007|ref|YP_448239.1| - 3.4e-17 62.7 0.0 5.1e-17 62.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|84490007|ref|YP_448239.1| - 5e-14 52.4 0.3 2.1e-13 50.4 0.2 1.9 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|84490007|ref|YP_448239.1| - 1.8e-09 37.2 0.0 4e-09 36.0 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.6 gi|84490007|ref|YP_448239.1| - 1.2e-08 34.6 0.1 1.5e-07 31.0 0.1 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|84490007|ref|YP_448239.1| - 1.5e-06 27.7 0.0 2.9e-06 26.8 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.17 gi|84490007|ref|YP_448239.1| - 2.1e-05 23.9 0.0 3.9e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|84490007|ref|YP_448239.1| - 5.6e-05 22.7 0.0 0.0001 21.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|84490007|ref|YP_448239.1| - 0.068 13.6 0.0 0.19 12.2 0.0 1.8 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain HycI PF01750.13 gi|84490008|ref|YP_448240.1| - 4.4e-16 58.6 0.5 4.9e-16 58.4 0.4 1.0 1 0 0 1 1 1 1 Hydrogenase maturation protease DUF2666 PF10869.3 gi|84490008|ref|YP_448240.1| - 0.0032 17.5 0.7 0.004 17.1 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2666) UPF0259 PF06790.6 gi|84490008|ref|YP_448240.1| - 0.28 10.5 4.5 0.33 10.3 3.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) Methyltransf_31 PF13847.1 gi|84490009|ref|YP_448241.1| - 1.2e-10 41.2 0.5 1.6e-10 40.8 0.3 1.2 1 0 0 1 1 1 1 Methyltransferase domain PRMT5 PF05185.11 gi|84490009|ref|YP_448241.1| - 6.8e-09 35.1 0.3 7.9e-09 34.9 0.2 1.1 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase RrnaAD PF00398.15 gi|84490009|ref|YP_448241.1| - 1.6e-08 33.9 0.1 2.3e-08 33.4 0.1 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.2 gi|84490009|ref|YP_448241.1| - 3.6e-08 33.9 0.0 5.4e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|84490009|ref|YP_448241.1| - 4.3e-08 32.6 0.1 7e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.9 gi|84490009|ref|YP_448241.1| - 7.3e-06 25.4 0.0 1.3e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|84490009|ref|YP_448241.1| - 1.6e-05 24.9 0.0 2.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|84490009|ref|YP_448241.1| - 2.2e-05 24.8 0.0 3.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|84490009|ref|YP_448241.1| - 0.00063 20.1 0.0 0.001 19.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|84490009|ref|YP_448241.1| - 0.0029 17.9 0.0 0.0046 17.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|84490009|ref|YP_448241.1| - 0.0047 16.3 0.0 0.0062 15.9 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) UPF0020 PF01170.13 gi|84490009|ref|YP_448241.1| - 0.016 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.1 gi|84490009|ref|YP_448241.1| - 0.038 13.7 0.0 0.052 13.2 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.5 gi|84490009|ref|YP_448241.1| - 0.051 13.1 2.0 0.25 10.8 1.3 2.1 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NikR_C PF08753.6 gi|84490010|ref|YP_448242.1| - 4.5e-29 100.1 4.2 6.5e-29 99.6 2.9 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|84490010|ref|YP_448242.1| - 0.0012 18.6 0.1 0.0027 17.5 0.0 1.7 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family CBS PF00571.23 gi|84490011|ref|YP_448243.1| - 4.7e-28 96.7 0.5 2.3e-13 49.6 0.1 2.1 2 0 0 2 2 2 2 CBS domain TrkA_N PF02254.13 gi|84490012|ref|YP_448244.1| - 9.5e-27 93.3 1.4 1e-26 93.1 0.3 1.6 2 0 0 2 2 2 1 TrkA-N domain NAD_binding_7 PF13241.1 gi|84490012|ref|YP_448244.1| - 3.1e-06 27.3 0.3 4.2e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding TrkA_C PF02080.16 gi|84490012|ref|YP_448244.1| - 3e-05 23.5 0.1 5.7e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 TrkA-C domain F420_oxidored PF03807.12 gi|84490012|ref|YP_448244.1| - 0.0034 17.7 0.2 0.014 15.8 0.0 2.1 1 1 2 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 gi|84490012|ref|YP_448244.1| - 0.0083 15.5 0.1 0.04 13.3 0.0 2.0 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_2 PF07992.9 gi|84490012|ref|YP_448244.1| - 0.0083 16.0 0.1 0.014 15.2 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|84490012|ref|YP_448244.1| - 0.021 14.2 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Methyltransf_31 PF13847.1 gi|84490012|ref|YP_448244.1| - 0.031 13.8 0.0 0.087 12.4 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain Saccharop_dh PF03435.13 gi|84490012|ref|YP_448244.1| - 0.033 13.1 0.0 0.043 12.8 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Pyr_redox PF00070.22 gi|84490012|ref|YP_448244.1| - 0.042 14.2 0.1 0.36 11.2 0.0 2.5 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Gp_dh_N PF00044.19 gi|84490012|ref|YP_448244.1| - 0.067 13.1 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|84490012|ref|YP_448244.1| - 0.081 12.5 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|84490012|ref|YP_448244.1| - 0.098 12.4 0.1 0.25 11.1 0.0 1.9 2 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase DAO PF01266.19 gi|84490012|ref|YP_448244.1| - 0.11 11.3 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase VWA_CoxE PF05762.9 gi|84490013|ref|YP_448245.1| - 1.4e-33 115.9 0.0 2.1e-33 115.3 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein Eaf7 PF07904.8 gi|84490013|ref|YP_448245.1| - 0.057 13.3 3.8 0.051 13.5 0.9 2.3 2 1 0 2 2 2 0 Chromatin modification-related protein EAF7 VWA_CoxE PF05762.9 gi|84490014|ref|YP_448246.1| - 7.8e-33 113.4 0.0 1.1e-32 113.0 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein GATase_3 PF07685.9 gi|84490015|ref|YP_448247.1| - 5.1e-41 139.8 0.3 8.5e-41 139.1 0.2 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|84490015|ref|YP_448247.1| - 1.7e-29 102.6 0.1 2.4e-29 102.1 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|84490015|ref|YP_448247.1| - 4e-23 82.0 0.1 7.3e-23 81.2 0.1 1.4 1 1 0 1 1 1 1 AAA domain SNO PF01174.14 gi|84490015|ref|YP_448247.1| - 2.1e-06 27.4 0.0 4.1e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|84490015|ref|YP_448247.1| - 1.4e-05 24.6 0.0 4.5e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase class-I MobB PF03205.9 gi|84490015|ref|YP_448247.1| - 0.00013 21.7 0.1 0.021 14.5 0.0 2.9 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B DJ-1_PfpI PF01965.19 gi|84490015|ref|YP_448247.1| - 0.0032 16.9 0.0 0.04 13.3 0.0 2.4 2 0 0 2 2 2 1 DJ-1/PfpI family SRP54 PF00448.17 gi|84490015|ref|YP_448247.1| - 0.022 14.2 1.9 3.8 6.9 0.0 2.9 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain CTP_synth_N PF06418.9 gi|84490015|ref|YP_448247.1| - 0.024 13.7 0.0 0.043 12.9 0.0 1.4 1 0 0 1 1 1 0 CTP synthase N-terminus Peptidase_C26 PF07722.8 gi|84490015|ref|YP_448247.1| - 0.049 13.0 0.1 0.16 11.4 0.0 2.0 1 1 0 1 1 1 0 Peptidase C26 DUF1611 PF07755.6 gi|84490015|ref|YP_448247.1| - 0.07 11.7 0.0 4.9 5.7 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1611) VirC1 PF07015.6 gi|84490015|ref|YP_448247.1| - 0.17 10.9 0.2 0.4 9.7 0.0 1.6 2 0 0 2 2 2 0 VirC1 protein Lon_C PF05362.8 gi|84490016|ref|YP_448248.1| - 1.5e-31 109.3 2.2 2.7e-31 108.4 1.5 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.1 gi|84490016|ref|YP_448248.1| - 4.1e-29 101.6 0.2 2.2e-20 72.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|84490016|ref|YP_448248.1| - 5.9e-18 64.9 0.0 3e-09 36.5 0.0 2.7 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|84490016|ref|YP_448248.1| - 4.7e-15 55.3 0.0 6.5e-10 38.5 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI MCM PF00493.18 gi|84490016|ref|YP_448248.1| - 3e-10 39.4 1.0 0.0052 15.6 0.0 3.2 3 0 0 3 3 3 3 MCM2/3/5 family AAA_5 PF07728.9 gi|84490016|ref|YP_448248.1| - 2.8e-09 36.8 0.0 0.00038 20.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.1 gi|84490016|ref|YP_448248.1| - 1.1e-08 34.5 0.5 2.8e-08 33.3 0.4 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Sigma54_activ_2 PF14532.1 gi|84490016|ref|YP_448248.1| - 1.2e-08 35.1 0.0 0.00014 21.9 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA PF00004.24 gi|84490016|ref|YP_448248.1| - 3.1e-07 30.6 0.0 0.0011 19.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.6 gi|84490016|ref|YP_448248.1| - 3.5e-05 23.4 0.0 0.042 13.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|84490016|ref|YP_448248.1| - 3.5e-05 22.9 0.1 0.042 12.8 0.0 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|84490016|ref|YP_448248.1| - 7.7e-05 22.8 0.0 0.0083 16.2 0.0 2.7 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|84490016|ref|YP_448248.1| - 0.00021 20.7 0.0 0.0045 16.4 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_18 PF13238.1 gi|84490016|ref|YP_448248.1| - 0.00038 20.7 0.1 0.0017 18.6 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_16 PF13191.1 gi|84490016|ref|YP_448248.1| - 0.0004 20.4 0.0 0.0011 18.9 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.1 gi|84490016|ref|YP_448248.1| - 0.00046 19.8 0.1 0.058 12.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|84490016|ref|YP_448248.1| - 0.00067 19.4 0.0 0.7 9.5 0.0 3.1 3 0 0 3 3 3 1 NTPase ABC_tran PF00005.22 gi|84490016|ref|YP_448248.1| - 0.0059 16.9 0.1 0.039 14.2 0.0 2.3 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.1 gi|84490016|ref|YP_448248.1| - 0.0064 15.9 0.0 0.023 14.2 0.0 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_PrkA PF08298.6 gi|84490016|ref|YP_448248.1| - 0.0065 15.2 0.3 0.18 10.4 0.0 2.3 2 0 0 2 2 2 1 PrkA AAA domain Parvo_NS1 PF01057.12 gi|84490016|ref|YP_448248.1| - 0.016 14.0 0.0 0.031 13.1 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_19 PF13245.1 gi|84490016|ref|YP_448248.1| - 0.018 14.7 0.0 0.049 13.3 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain T2SE PF00437.15 gi|84490016|ref|YP_448248.1| - 0.02 13.8 0.1 0.064 12.1 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein PhoH PF02562.11 gi|84490016|ref|YP_448248.1| - 0.027 13.7 0.5 0.11 11.7 0.0 2.2 2 1 0 2 2 2 0 PhoH-like protein DUF815 PF05673.8 gi|84490016|ref|YP_448248.1| - 0.039 12.8 0.0 0.079 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NACHT PF05729.7 gi|84490016|ref|YP_448248.1| - 0.04 13.5 0.0 0.094 12.3 0.0 1.6 1 0 0 1 1 1 0 NACHT domain EcsB PF05975.7 gi|84490016|ref|YP_448248.1| - 0.15 10.5 0.5 0.2 10.1 0.3 1.1 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF4190 PF13828.1 gi|84490016|ref|YP_448248.1| - 0.8 9.2 5.2 2.4 7.7 0.4 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4190) DEAD PF00270.24 gi|84490017|ref|YP_448249.1| - 1.2e-47 161.5 0.1 4.9e-47 159.5 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|84490017|ref|YP_448249.1| - 1e-25 89.3 0.1 3.6e-25 87.6 0.1 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.10 gi|84490017|ref|YP_448249.1| - 2.3e-21 75.2 1.8 3.9e-21 74.5 0.0 2.4 3 0 0 3 3 3 1 DbpA RNA binding domain CMS1 PF14617.1 gi|84490017|ref|YP_448249.1| - 0.0023 17.0 0.1 0.0023 17.0 0.1 2.8 3 0 0 3 3 3 1 U3-containing 90S pre-ribosomal complex subunit Flavi_DEAD PF07652.9 gi|84490017|ref|YP_448249.1| - 0.07 12.8 0.0 0.48 10.1 0.0 2.3 2 0 0 2 2 2 0 Flavivirus DEAD domain Pribosyltran_N PF13793.1 gi|84490018|ref|YP_448250.1| - 1.3e-31 108.7 2.6 9.7e-29 99.4 0.0 2.3 2 0 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|84490018|ref|YP_448250.1| - 7.8e-18 64.4 0.6 4.3e-17 62.0 0.3 2.1 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|84490018|ref|YP_448250.1| - 2.1e-09 37.3 3.3 3.8e-09 36.5 2.3 1.4 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|84490018|ref|YP_448250.1| - 1.6e-06 27.4 2.5 3.1e-06 26.5 1.1 1.9 1 1 1 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|84490018|ref|YP_448250.1| - 8.7e-05 21.8 0.4 0.00025 20.4 0.2 1.7 1 1 0 1 1 1 1 Phosphoribosyl transferase PRTase_3 PF15610.1 gi|84490018|ref|YP_448250.1| - 0.047 12.5 0.3 0.24 10.2 0.1 2.1 2 0 0 2 2 2 0 PRTase ComF-like HypA PF01155.14 gi|84490019|ref|YP_448251.1| - 2.6e-30 104.4 3.4 2.9e-30 104.2 2.4 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Cytomega_gL PF01801.11 gi|84490019|ref|YP_448251.1| - 0.052 13.0 0.5 0.07 12.6 0.1 1.4 2 0 0 2 2 2 0 Cytomegalovirus glycoprotein L DnaJ_CXXCXGXG PF00684.14 gi|84490019|ref|YP_448251.1| - 0.057 13.4 1.2 0.096 12.7 0.8 1.3 1 0 0 1 1 1 0 DnaJ central domain TFIIS_C PF01096.13 gi|84490019|ref|YP_448251.1| - 0.17 11.5 0.7 4.1 7.1 0.1 2.4 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-CSL PF05207.8 gi|84490019|ref|YP_448251.1| - 0.22 11.0 1.4 0.49 9.9 0.9 1.6 1 1 0 1 1 1 0 CSL zinc finger Zn-ribbon_8 PF09723.5 gi|84490019|ref|YP_448251.1| - 0.84 9.6 4.0 3.2 7.7 2.7 1.9 1 1 0 1 1 1 0 Zinc ribbon domain cobW PF02492.14 gi|84490020|ref|YP_448252.1| - 3.7e-39 133.9 1.3 4.8e-39 133.6 0.9 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|84490020|ref|YP_448252.1| - 1.4e-06 27.2 0.6 0.00078 18.3 0.3 2.1 2 0 0 2 2 2 2 ArgK protein GTP_EFTU PF00009.22 gi|84490020|ref|YP_448252.1| - 0.00082 18.8 0.5 0.24 10.8 0.1 2.2 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Zeta_toxin PF06414.7 gi|84490020|ref|YP_448252.1| - 0.00084 18.4 0.0 0.0013 17.9 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin KAP_NTPase PF07693.9 gi|84490020|ref|YP_448252.1| - 0.002 17.1 0.0 0.002 17.1 0.0 1.1 1 0 0 1 1 1 1 KAP family P-loop domain ABC_tran PF00005.22 gi|84490020|ref|YP_448252.1| - 0.0029 17.9 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF258 PF03193.11 gi|84490020|ref|YP_448252.1| - 0.009 15.2 0.0 0.054 12.6 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Miro PF08477.8 gi|84490020|ref|YP_448252.1| - 0.013 15.9 0.1 0.094 13.2 0.0 2.1 2 0 0 2 2 2 0 Miro-like protein Arf PF00025.16 gi|84490020|ref|YP_448252.1| - 0.024 13.8 0.1 0.39 9.9 0.0 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_16 PF13191.1 gi|84490020|ref|YP_448252.1| - 0.025 14.5 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain MobB PF03205.9 gi|84490020|ref|YP_448252.1| - 0.031 13.9 0.2 0.16 11.6 0.0 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Pox_A32 PF04665.7 gi|84490020|ref|YP_448252.1| - 0.032 13.5 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein UPF0079 PF02367.12 gi|84490020|ref|YP_448252.1| - 0.051 13.1 0.0 0.085 12.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 TrwB_AAD_bind PF10412.4 gi|84490020|ref|YP_448252.1| - 0.053 12.1 0.0 0.076 11.6 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATP_bind_1 PF03029.12 gi|84490020|ref|YP_448252.1| - 0.079 12.4 0.1 2.8 7.4 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_pol_A_bac PF01000.21 gi|84490020|ref|YP_448252.1| - 0.21 11.7 1.4 3.6 7.7 0.1 2.3 1 1 1 2 2 2 0 RNA polymerase Rpb3/RpoA insert domain DUF354 PF04007.7 gi|84490021|ref|YP_448253.1| - 1.4e-129 431.8 7.5 1.5e-129 431.6 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) LpxB PF02684.10 gi|84490021|ref|YP_448253.1| - 0.01 14.5 0.0 0.031 12.9 0.1 1.7 2 0 0 2 2 2 0 Lipid-A-disaccharide synthetase Glyco_trans_1_3 PF13528.1 gi|84490021|ref|YP_448253.1| - 0.03 13.5 0.0 0.25 10.5 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase family 1 Epimerase_2 PF02350.14 gi|84490021|ref|YP_448253.1| - 0.046 12.4 0.0 0.061 12.0 0.0 1.2 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Nitroreductase PF00881.19 gi|84490023|ref|YP_448255.1| - 3.9e-20 72.3 0.0 5.7e-20 71.7 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.22 gi|84490023|ref|YP_448255.1| - 9e-09 34.5 13.9 0.00011 21.5 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84490023|ref|YP_448255.1| - 5.8e-08 32.4 22.5 5.5e-06 26.0 8.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84490023|ref|YP_448255.1| - 7e-08 32.7 11.7 1.7e-07 31.5 8.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84490023|ref|YP_448255.1| - 1.3e-07 31.7 11.9 2.8e-07 30.6 8.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84490023|ref|YP_448255.1| - 1.1e-06 28.2 12.1 0.0011 18.6 1.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84490023|ref|YP_448255.1| - 8.7e-06 25.6 11.0 0.00028 20.8 8.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490023|ref|YP_448255.1| - 4e-05 23.3 12.9 0.00011 22.0 8.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490023|ref|YP_448255.1| - 4.4e-05 23.1 13.1 0.016 15.0 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84490023|ref|YP_448255.1| - 7.7e-05 23.3 9.2 0.009 16.7 0.6 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|84490023|ref|YP_448255.1| - 0.00021 21.3 14.5 0.063 13.6 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84490023|ref|YP_448255.1| - 0.0006 20.1 11.3 0.04 14.2 1.0 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84490023|ref|YP_448255.1| - 0.0021 18.6 6.3 0.71 10.4 0.6 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|84490023|ref|YP_448255.1| - 0.0025 18.2 15.8 0.13 12.7 2.0 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84490023|ref|YP_448255.1| - 0.0042 17.4 9.3 0.043 14.2 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|84490023|ref|YP_448255.1| - 0.017 15.6 18.1 0.18 12.4 3.5 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Meth_synt_2 PF01717.13 gi|84490024|ref|YP_448256.1| - 1.8e-61 207.9 0.3 2.7e-61 207.3 0.2 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|84490024|ref|YP_448256.1| - 3.1e-09 36.5 0.0 1.3e-08 34.5 0.0 1.7 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.12 gi|84490024|ref|YP_448256.1| - 2.6e-06 26.6 0.1 4e-06 26.0 0.1 1.3 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Thymidylat_synt PF00303.14 gi|84490025|ref|YP_448257.1| - 1.2e-30 106.4 0.5 1.6e-26 92.9 0.1 2.0 1 1 1 2 2 2 2 Thymidylate synthase MCH PF02289.11 gi|84490026|ref|YP_448258.1| - 1.3e-125 418.5 1.4 1.5e-125 418.4 1.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) DMRL_synthase PF00885.14 gi|84490027|ref|YP_448259.1| - 1.9e-19 69.7 0.1 2.2e-19 69.5 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase MIP PF00230.15 gi|84490028|ref|YP_448260.1| - 4e-41 140.9 18.9 1.3e-40 139.2 13.1 1.7 1 1 0 1 1 1 1 Major intrinsic protein DUF1761 PF08570.5 gi|84490028|ref|YP_448260.1| - 3.6 7.6 21.3 1.4 8.8 3.6 3.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF2160 PF09928.4 gi|84490028|ref|YP_448260.1| - 4.5 7.4 9.4 1.1 9.4 1.9 2.4 2 0 0 2 2 2 0 Predicted small integral membrane protein (DUF2160) DUF479 PF04336.7 gi|84490029|ref|YP_448261.1| - 0.049 13.7 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF479 Seryl_tRNA_N PF02403.17 gi|84490029|ref|YP_448261.1| - 0.059 13.3 0.6 0.059 13.3 0.4 1.5 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain TFIIS_C PF01096.13 gi|84490030|ref|YP_448262.1| - 2.4e-14 52.6 5.2 2.4e-14 52.6 3.6 2.8 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) DZR PF12773.2 gi|84490030|ref|YP_448262.1| - 2.6e-05 23.9 5.1 0.011 15.5 0.3 2.3 2 1 0 2 2 2 2 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|84490030|ref|YP_448262.1| - 4e-05 23.2 2.8 4e-05 23.2 1.9 3.0 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zf-C2HC5 PF06221.8 gi|84490030|ref|YP_448262.1| - 0.00037 20.1 5.7 0.0041 16.8 0.4 3.0 3 0 0 3 3 3 1 Putative zinc finger motif, C2HC5-type TF_Zn_Ribbon PF08271.7 gi|84490030|ref|YP_448262.1| - 0.0052 16.0 7.6 0.067 12.5 0.1 3.4 4 1 0 4 4 4 1 TFIIB zinc-binding Prok-RING_1 PF14446.1 gi|84490030|ref|YP_448262.1| - 0.025 14.3 5.3 0.13 11.9 0.2 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zinc_ribbon_4 PF13717.1 gi|84490030|ref|YP_448262.1| - 0.039 13.6 12.6 0.099 12.3 0.3 3.9 4 0 0 4 4 4 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84490030|ref|YP_448262.1| - 0.046 13.3 10.4 0.95 9.1 2.1 2.5 2 1 0 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_5 PF13719.1 gi|84490030|ref|YP_448262.1| - 0.057 13.0 12.9 0.14 11.7 0.3 3.8 4 0 0 4 4 4 0 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|84490030|ref|YP_448262.1| - 0.068 12.9 13.4 0.97 9.2 0.1 3.9 2 2 2 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like DUF35_N PF12172.3 gi|84490030|ref|YP_448262.1| - 0.073 13.0 8.8 2.6 8.0 0.4 3.3 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C4pol PF14260.1 gi|84490030|ref|YP_448262.1| - 0.12 12.3 2.4 3.3 7.7 1.7 2.2 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta Ogr_Delta PF04606.7 gi|84490030|ref|YP_448262.1| - 0.16 11.6 6.3 13 5.5 0.2 3.2 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger zinc_ribbon_2 PF13240.1 gi|84490030|ref|YP_448262.1| - 0.19 11.2 15.4 0.44 10.0 2.3 3.5 4 0 0 4 4 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|84490030|ref|YP_448262.1| - 0.23 10.6 13.9 0.091 12.0 2.6 3.3 3 1 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|84490030|ref|YP_448262.1| - 0.24 11.2 12.5 2 8.2 2.6 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Desulfoferrod_N PF06397.7 gi|84490030|ref|YP_448262.1| - 0.27 10.6 0.1 0.27 10.6 0.1 2.9 3 0 0 3 3 3 0 Desulfoferrodoxin, N-terminal domain zf-NADH-PPase PF09297.6 gi|84490030|ref|YP_448262.1| - 0.32 10.5 6.4 0.32 10.5 0.2 3.0 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-MYND PF01753.13 gi|84490030|ref|YP_448262.1| - 0.41 10.5 7.2 3.9 7.4 0.5 2.4 2 0 0 2 2 2 0 MYND finger Zn-ribbon_8 PF09723.5 gi|84490030|ref|YP_448262.1| - 0.44 10.5 9.6 2.3 8.2 0.3 3.7 4 0 0 4 4 4 0 Zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|84490030|ref|YP_448262.1| - 0.47 10.2 6.6 0.19 11.5 0.5 2.6 2 1 0 2 2 2 0 zinc-ribbons ADK_lid PF05191.9 gi|84490030|ref|YP_448262.1| - 0.52 10.0 6.0 22 4.7 0.2 3.3 3 0 0 3 3 3 0 Adenylate kinase, active site lid UPF0547 PF10571.4 gi|84490030|ref|YP_448262.1| - 0.6 9.8 8.4 0.31 10.7 1.2 3.0 3 1 0 3 3 3 0 Uncharacterised protein family UPF0547 DUF2387 PF09526.5 gi|84490030|ref|YP_448262.1| - 0.62 10.0 9.1 3.6 7.5 0.3 3.0 1 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) Ribosomal_L32p PF01783.18 gi|84490030|ref|YP_448262.1| - 0.69 10.1 4.2 2.6 8.2 0.3 2.4 3 0 0 3 3 2 0 Ribosomal L32p protein family Mcm10 PF09332.6 gi|84490030|ref|YP_448262.1| - 0.82 8.9 4.7 0.42 9.9 0.6 2.1 2 1 0 2 2 2 0 Mcm10 replication factor HypA PF01155.14 gi|84490030|ref|YP_448262.1| - 1.9 8.1 7.3 1.3e+02 2.2 5.1 2.7 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-UBR PF02207.15 gi|84490030|ref|YP_448262.1| - 2.3 8.0 7.7 24 4.7 0.4 3.0 1 1 1 2 2 2 0 Putative zinc finger in N-recognin (UBR box) GFA PF04828.9 gi|84490030|ref|YP_448262.1| - 2.5 8.0 10.4 22 5.0 0.4 3.3 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme RRN7 PF11781.3 gi|84490030|ref|YP_448262.1| - 3.5 7.2 6.7 6.8 6.2 0.5 3.1 3 0 0 3 3 3 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-CHC2 PF01807.15 gi|84490030|ref|YP_448262.1| - 3.6 7.2 4.8 1.6 8.3 0.0 2.4 3 0 0 3 3 2 0 CHC2 zinc finger Rpr2 PF04032.11 gi|84490030|ref|YP_448262.1| - 7 6.5 9.2 3.3e+02 1.2 6.4 2.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-H2C2_2 PF13465.1 gi|84490030|ref|YP_448262.1| - 8 6.9 8.6 13 6.3 0.1 3.2 3 0 0 3 3 3 0 Zinc-finger double domain Ribosomal_L15e PF00827.12 gi|84490031|ref|YP_448263.1| - 4.6e-82 274.1 11.5 5.1e-82 274.0 8.0 1.0 1 0 0 1 1 1 1 Ribosomal L15 RNA_binding PF01877.12 gi|84490032|ref|YP_448264.1| - 3.9e-33 114.0 1.8 4.7e-33 113.7 1.2 1.1 1 0 0 1 1 1 1 RNA binding Limkain-b1 PF11608.3 gi|84490032|ref|YP_448264.1| - 0.13 12.0 1.2 10 5.9 0.1 2.8 1 1 1 2 2 2 0 Limkain b1 IBN_N PF03810.14 gi|84490032|ref|YP_448264.1| - 0.23 11.4 1.4 0.36 10.7 0.9 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain Pollen_allerg_2 PF01620.11 gi|84490032|ref|YP_448264.1| - 0.26 11.6 1.1 8.7 6.6 0.0 2.1 1 1 1 2 2 2 0 Ribonuclease (pollen allergen) RNase_P_p30 PF01876.11 gi|84490033|ref|YP_448265.1| - 9.7e-37 125.5 1.0 1.2e-36 125.2 0.7 1.1 1 0 0 1 1 1 1 RNase P subunit p30 AIRC PF00731.15 gi|84490033|ref|YP_448265.1| - 0.086 12.1 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 AIR carboxylase RNase_P_Rpp14 PF01900.14 gi|84490034|ref|YP_448266.1| - 3.4e-22 78.3 0.5 4.2e-22 78.0 0.4 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family CBM_20 PF00686.14 gi|84490034|ref|YP_448266.1| - 0.13 11.9 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Starch binding domain Lyase_1 PF00206.15 gi|84490035|ref|YP_448267.1| - 1.2e-52 179.0 1.5 1.8e-52 178.4 1.1 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|84490035|ref|YP_448267.1| - 8.9e-26 89.7 0.7 3.6e-25 87.7 0.0 2.3 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus Phage_cap_E PF03864.10 gi|84490035|ref|YP_448267.1| - 0.044 12.6 0.0 0.073 11.9 0.0 1.4 1 0 0 1 1 1 0 Phage major capsid protein E Proteasome PF00227.21 gi|84490036|ref|YP_448268.1| - 5.5e-57 192.1 0.3 5.5e-57 192.1 0.2 1.6 2 0 0 2 2 2 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|84490036|ref|YP_448268.1| - 2.2e-14 52.4 0.1 4.3e-14 51.5 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature PRTP PF01366.13 gi|84490036|ref|YP_448268.1| - 0.067 11.1 4.5 0.1 10.5 3.1 1.2 1 0 0 1 1 1 0 Herpesvirus processing and transport protein U79_P34 PF03064.11 gi|84490036|ref|YP_448268.1| - 0.13 11.7 9.6 0.5 9.8 7.3 1.5 2 0 0 2 2 2 0 HSV U79 / HCMV P34 NARP1 PF12569.3 gi|84490036|ref|YP_448268.1| - 0.69 8.5 15.1 0.92 8.1 10.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 ISG65-75 PF11727.3 gi|84490036|ref|YP_448268.1| - 4 6.4 16.1 5.9 5.8 11.2 1.2 1 0 0 1 1 1 0 Invariant surface glycoprotein CDC45 PF02724.9 gi|84490036|ref|YP_448268.1| - 9.3 4.1 16.4 12 3.7 11.3 1.1 1 0 0 1 1 1 0 CDC45-like protein SBDS PF01172.13 gi|84490037|ref|YP_448269.1| - 4.9e-26 90.3 2.6 8.5e-26 89.5 1.8 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|84490037|ref|YP_448269.1| - 2.4e-19 69.2 0.1 2.4e-19 69.2 0.1 1.8 2 0 0 2 2 2 1 SBDS protein C-terminal domain AAA_15 PF13175.1 gi|84490037|ref|YP_448269.1| - 0.029 13.4 0.6 0.036 13.1 0.4 1.0 1 0 0 1 1 1 0 AAA ATPase domain MAT1 PF06391.8 gi|84490037|ref|YP_448269.1| - 0.19 11.2 7.2 0.24 10.9 5.0 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 ECR1_N PF14382.1 gi|84490038|ref|YP_448270.1| - 5e-12 44.8 0.1 9e-12 44.0 0.1 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region S1 PF00575.18 gi|84490038|ref|YP_448270.1| - 1.7e-05 24.8 0.0 7.7e-05 22.7 0.0 2.0 2 0 0 2 2 2 1 S1 RNA binding domain RNase_PH PF01138.16 gi|84490039|ref|YP_448271.1| - 2.2e-35 121.8 0.0 2.9e-35 121.4 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|84490039|ref|YP_448271.1| - 1.1e-17 63.6 0.2 2.7e-17 62.4 0.1 1.7 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.16 gi|84490040|ref|YP_448272.1| - 2.1e-27 96.0 0.0 3.3e-27 95.3 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|84490040|ref|YP_448272.1| - 2e-10 40.4 1.7 2.9e-10 39.9 0.1 2.2 4 0 0 4 4 4 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.14 gi|84490041|ref|YP_448273.1| - 2.2e-35 120.4 6.2 2.3e-35 120.3 4.3 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.2 gi|84490041|ref|YP_448273.1| - 0.0017 18.0 2.7 0.0023 17.7 1.9 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84490041|ref|YP_448273.1| - 0.0049 16.4 1.0 0.0075 15.8 0.7 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain A2L_zn_ribbon PF08792.5 gi|84490041|ref|YP_448273.1| - 0.015 14.7 0.1 0.025 14.0 0.1 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|84490041|ref|YP_448273.1| - 0.024 13.9 0.7 0.39 10.0 0.0 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Rep_fac-A_C PF08646.5 gi|84490041|ref|YP_448273.1| - 0.032 13.9 1.2 0.04 13.6 0.8 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain Zn-ribbon_8 PF09723.5 gi|84490041|ref|YP_448273.1| - 0.035 14.0 2.7 2.6 8.0 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain IBR PF01485.16 gi|84490041|ref|YP_448273.1| - 0.047 13.5 0.7 0.062 13.1 0.5 1.1 1 0 0 1 1 1 0 IBR domain Rubredoxin PF00301.15 gi|84490041|ref|YP_448273.1| - 0.073 12.9 0.8 7.7 6.4 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin zf-C2H2_4 PF13894.1 gi|84490041|ref|YP_448273.1| - 0.075 13.4 1.5 2.6 8.5 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-DHHC PF01529.15 gi|84490041|ref|YP_448273.1| - 0.095 12.0 0.3 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase zf-TFIIB PF13453.1 gi|84490041|ref|YP_448273.1| - 0.16 11.1 1.4 0.26 10.5 0.9 1.3 1 0 0 1 1 1 0 Transcription factor zinc-finger DUF4379 PF14311.1 gi|84490041|ref|YP_448273.1| - 0.17 11.7 3.6 1.4 8.7 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zf-ribbon_3 PF13248.1 gi|84490041|ref|YP_448273.1| - 0.18 11.0 2.0 7 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.21 gi|84490041|ref|YP_448273.1| - 0.19 12.1 3.8 8.4 6.9 0.3 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type DZR PF12773.2 gi|84490041|ref|YP_448273.1| - 0.24 11.2 2.1 1.2 9.0 1.4 1.8 1 1 1 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|84490041|ref|YP_448273.1| - 0.52 9.8 2.8 11 5.6 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|84490041|ref|YP_448273.1| - 0.75 9.7 3.6 9.1 6.3 0.2 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-H2C2_2 PF13465.1 gi|84490041|ref|YP_448273.1| - 0.9 9.9 6.7 9.1 6.7 1.0 2.3 1 1 1 2 2 2 0 Zinc-finger double domain Mut7-C PF01927.11 gi|84490041|ref|YP_448273.1| - 1.1 9.2 3.7 4.4 7.2 2.6 1.8 1 1 0 1 1 1 0 Mut7-C RNAse domain zinc_ribbon_5 PF13719.1 gi|84490041|ref|YP_448273.1| - 1.8 8.1 7.1 0.89 9.1 0.3 2.6 2 1 0 2 2 2 0 zinc-ribbon domain DUF1610 PF07754.6 gi|84490041|ref|YP_448273.1| - 2.6 8.2 5.5 5.2 7.2 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zinc_ribbon_4 PF13717.1 gi|84490041|ref|YP_448273.1| - 3.6 7.3 7.4 1.8 8.3 0.4 2.6 2 1 0 2 2 2 0 zinc-ribbon domain DUF1936 PF09151.5 gi|84490041|ref|YP_448273.1| - 6.8 6.2 6.1 2.2 7.8 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) DNA_RNApol_7kD PF03604.8 gi|297616208|ref|YP_003710348.1| - 5.9e-07 28.8 7.2 7.7e-07 28.4 5.0 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.2 gi|297616208|ref|YP_003710348.1| - 0.0027 17.4 0.3 0.0031 17.3 0.2 1.1 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|297616208|ref|YP_003710348.1| - 0.0072 15.7 4.7 0.049 13.1 3.2 2.0 1 1 0 1 1 1 1 zinc-ribbon domain Desulfoferrod_N PF06397.7 gi|297616208|ref|YP_003710348.1| - 0.0098 15.2 0.7 0.0098 15.2 0.5 1.7 2 0 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain HypA PF01155.14 gi|297616208|ref|YP_003710348.1| - 0.02 14.6 0.4 0.02 14.6 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-ribbon_3 PF13248.1 gi|297616208|ref|YP_003710348.1| - 0.022 13.9 3.7 0.045 12.9 2.5 1.6 1 1 0 1 1 1 0 zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|297616208|ref|YP_003710348.1| - 0.028 14.7 3.9 2.2 8.7 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2HC5 PF06221.8 gi|297616208|ref|YP_003710348.1| - 0.039 13.7 0.3 0.044 13.5 0.2 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type GILT PF03227.11 gi|297616208|ref|YP_003710348.1| - 0.047 13.5 0.1 0.047 13.5 0.0 1.3 2 0 0 2 2 1 0 Gamma interferon inducible lysosomal thiol reductase (GILT) zf-Di19 PF05605.7 gi|297616208|ref|YP_003710348.1| - 0.048 13.7 3.6 3.1 8.0 0.6 2.1 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Cys_rich_CPXG PF14255.1 gi|297616208|ref|YP_003710348.1| - 0.057 13.2 2.8 3.1 7.6 0.2 2.1 2 0 0 2 2 2 0 Cysteine-rich CPXCG C1_1 PF00130.17 gi|297616208|ref|YP_003710348.1| - 0.057 13.1 1.8 0.27 11.0 1.5 1.7 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RNHCP PF12647.2 gi|297616208|ref|YP_003710348.1| - 0.058 13.2 0.2 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain A2L_zn_ribbon PF08792.5 gi|297616208|ref|YP_003710348.1| - 0.06 12.8 4.0 0.092 12.2 2.8 1.3 1 1 0 1 1 1 0 A2L zinc ribbon domain zf-ISL3 PF14690.1 gi|297616208|ref|YP_003710348.1| - 0.091 12.8 1.7 5.6 7.0 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-C3HC4_3 PF13920.1 gi|297616208|ref|YP_003710348.1| - 0.1 12.2 2.3 0.16 11.6 1.6 1.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Spt4 PF06093.8 gi|297616208|ref|YP_003710348.1| - 0.11 12.3 0.4 0.1 12.4 0.3 1.1 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger zf-CHY PF05495.7 gi|297616208|ref|YP_003710348.1| - 0.12 12.5 1.2 0.14 12.3 0.8 1.1 1 0 0 1 1 1 0 CHY zinc finger DUF329 PF03884.9 gi|297616208|ref|YP_003710348.1| - 0.12 11.9 1.1 1.3 8.6 1.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF329) PhnA_Zn_Ribbon PF08274.7 gi|297616208|ref|YP_003710348.1| - 0.14 12.0 0.9 11 5.9 0.1 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon CpXC PF14353.1 gi|297616208|ref|YP_003710348.1| - 0.15 12.0 2.2 3.4 7.6 0.1 2.0 1 1 1 2 2 2 0 CpXC protein zf-C2H2_4 PF13894.1 gi|297616208|ref|YP_003710348.1| - 0.16 12.3 1.0 8.2 7.0 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Prok-RING_1 PF14446.1 gi|297616208|ref|YP_003710348.1| - 0.17 11.6 2.0 5.2 6.8 0.0 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DiS_P_DiS PF06750.8 gi|297616208|ref|YP_003710348.1| - 0.24 11.2 1.7 1.3 8.8 0.1 1.9 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain zf-RING_3 PF14369.1 gi|297616208|ref|YP_003710348.1| - 0.25 11.3 2.1 0.44 10.5 1.5 1.5 1 1 0 1 1 1 0 zinc-finger Fer4 PF00037.22 gi|297616208|ref|YP_003710348.1| - 0.39 10.3 2.9 3 7.5 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain TFIIS_C PF01096.13 gi|297616208|ref|YP_003710348.1| - 0.42 10.2 2.4 3.7 7.2 0.3 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-FCS PF06467.9 gi|297616208|ref|YP_003710348.1| - 0.53 9.9 5.1 1.3 8.7 0.3 2.1 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Zn-ribbon_8 PF09723.5 gi|297616208|ref|YP_003710348.1| - 1.3 9.0 4.6 3.7 7.5 3.2 1.7 1 1 0 1 1 1 0 Zinc ribbon domain Fer4_4 PF12800.2 gi|297616208|ref|YP_003710348.1| - 1.7 9.1 3.9 3.8 8.0 0.2 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Thioredoxin_4 PF13462.1 gi|297616208|ref|YP_003710348.1| - 2.1 8.3 4.0 3 7.8 2.7 1.4 1 1 0 1 1 1 0 Thioredoxin zf-BED PF02892.10 gi|297616208|ref|YP_003710348.1| - 2.7 7.8 7.2 0.39 10.4 0.5 2.1 1 1 1 2 2 2 0 BED zinc finger Zn_Tnp_IS1595 PF12760.2 gi|297616208|ref|YP_003710348.1| - 3.1 7.6 5.3 25 4.8 3.7 2.0 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Brix PF04427.13 gi|84490042|ref|YP_448274.1| - 1.1e-11 44.7 1.5 1.3e-11 44.4 1.0 1.1 1 0 0 1 1 1 1 Brix domain Pcc1 PF09341.5 gi|84490043|ref|YP_448275.1| - 1.9e-19 69.4 0.3 2.1e-19 69.3 0.2 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 Hydrolase_like2 PF13246.1 gi|84490043|ref|YP_448275.1| - 0.017 15.0 0.4 0.051 13.5 0.3 1.8 1 1 0 1 1 1 0 Putative hydrolase of sodium-potassium ATPase alpha subunit Prefoldin_2 PF01920.15 gi|84490044|ref|YP_448276.1| - 2.5e-24 85.0 20.7 2.9e-24 84.8 14.4 1.0 1 0 0 1 1 1 1 Prefoldin subunit Phage_connector PF05352.7 gi|84490044|ref|YP_448276.1| - 0.074 12.2 1.5 0.1 11.7 1.0 1.3 1 1 0 1 1 1 0 Phage Connector (GP10) DUF812 PF05667.6 gi|84490044|ref|YP_448276.1| - 0.12 10.8 14.0 0.14 10.5 9.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Sipho_Gp157 PF05565.6 gi|84490044|ref|YP_448276.1| - 0.26 10.8 12.4 0.19 11.3 3.5 2.1 2 0 0 2 2 2 0 Siphovirus Gp157 Prefoldin PF02996.12 gi|84490044|ref|YP_448276.1| - 0.4 10.3 19.4 0.051 13.2 4.4 2.5 2 1 0 2 2 2 0 Prefoldin subunit eIF3_N PF09440.5 gi|84490044|ref|YP_448276.1| - 0.41 10.8 12.1 0.034 14.2 2.8 2.0 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain FliD_C PF07195.7 gi|84490044|ref|YP_448276.1| - 0.53 9.5 15.1 1.6 7.9 9.7 1.9 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF948 PF06103.6 gi|84490044|ref|YP_448276.1| - 0.91 9.4 14.6 2.4 8.0 1.9 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF972 PF06156.8 gi|84490044|ref|YP_448276.1| - 0.94 9.8 14.0 0.72 10.2 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF972) CDC37_N PF03234.9 gi|84490044|ref|YP_448276.1| - 1.3 9.3 14.6 6.7 6.9 10.1 1.8 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding YojJ PF10372.4 gi|84490044|ref|YP_448276.1| - 2.2 8.2 6.6 0.4 10.5 0.6 2.3 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus HisKA_3 PF07730.8 gi|84490044|ref|YP_448276.1| - 3.6 8.0 7.9 1.7 9.0 0.4 2.5 2 1 0 2 2 2 0 Histidine kinase DUF3450 PF11932.3 gi|84490044|ref|YP_448276.1| - 4.8 6.3 20.1 0.16 11.1 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) V_ATPase_I PF01496.14 gi|84490044|ref|YP_448276.1| - 5 4.8 10.1 6.7 4.4 7.0 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ax_dynein_light PF10211.4 gi|84490044|ref|YP_448276.1| - 5.4 6.8 18.5 2.7 7.7 4.9 2.0 2 0 0 2 2 2 0 Axonemal dynein light chain IFT57 PF10498.4 gi|84490044|ref|YP_448276.1| - 5.5 5.6 18.0 1.9 7.1 2.4 1.9 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 WXG100 PF06013.7 gi|84490044|ref|YP_448276.1| - 5.8 7.0 12.6 5 7.1 0.5 2.4 2 0 0 2 2 2 0 Proteins of 100 residues with WXG IncA PF04156.9 gi|84490044|ref|YP_448276.1| - 5.8 6.4 16.4 7.4 6.1 11.4 1.2 1 0 0 1 1 1 0 IncA protein Ded_cyto PF06920.8 gi|84490044|ref|YP_448276.1| - 5.9 6.1 10.4 39 3.4 7.2 2.0 1 1 0 1 1 1 0 Dedicator of cytokinesis eIF-4B PF06273.6 gi|84490044|ref|YP_448276.1| - 9 4.9 9.2 0.96 8.1 2.9 1.6 1 1 0 2 2 2 0 Plant specific eukaryotic initiation factor 4B His_biosynth PF00977.16 gi|84490045|ref|YP_448277.1| - 1.5e-39 135.6 1.8 1.6e-39 135.4 1.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein IGPS PF00218.16 gi|84490045|ref|YP_448277.1| - 0.0037 16.3 0.1 0.084 11.9 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.14 gi|84490045|ref|YP_448277.1| - 0.0047 16.4 0.1 0.0098 15.4 0.0 1.5 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Scm3 PF10384.4 gi|84490045|ref|YP_448277.1| - 0.02 14.3 1.0 0.04 13.3 0.4 1.7 1 1 0 1 1 1 0 Centromere protein Scm3 PRAI PF00697.17 gi|84490045|ref|YP_448277.1| - 0.022 14.3 0.0 0.034 13.6 0.0 1.3 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PfkB PF00294.19 gi|84490046|ref|YP_448278.1| - 3.3e-13 49.4 0.1 4.7e-13 48.9 0.1 1.3 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DUF1257 PF06868.6 gi|84490046|ref|YP_448278.1| - 0.043 13.7 1.0 0.11 12.4 0.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1257) DUF2367 PF10164.4 gi|84490047|ref|YP_448279.1| - 0.33 10.8 2.3 0.33 10.8 1.6 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) YoqO PF14037.1 gi|84490047|ref|YP_448279.1| - 0.36 10.9 3.4 0.41 10.7 2.4 1.2 1 0 0 1 1 1 0 YoqO-like protein Claudin_2 PF13903.1 gi|84490047|ref|YP_448279.1| - 0.48 10.0 3.1 0.45 10.1 2.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF3068 PF11271.3 gi|84490047|ref|YP_448279.1| - 1.3 8.0 5.0 7.5 5.5 0.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3068) Zn_peptidase_2 PF04298.7 gi|84490047|ref|YP_448279.1| - 1.3 8.2 3.5 1.3 8.2 2.4 1.0 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase PepSY_TM PF03929.11 gi|84490047|ref|YP_448279.1| - 3.6 8.1 10.6 7.7 7.1 0.7 2.3 2 0 0 2 2 2 0 PepSY-associated TM helix DUF843 PF05814.6 gi|84490047|ref|YP_448279.1| - 4.1 7.2 5.1 8.7 6.2 3.4 1.6 1 1 1 2 2 2 0 Baculovirus protein of unknown function (DUF843) SdpI PF13630.1 gi|84490047|ref|YP_448279.1| - 7.6 6.3 8.0 8.8 6.1 5.5 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family HAD_2 PF13419.1 gi|84490048|ref|YP_448280.1| - 6.8e-25 88.3 0.0 9e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|84490048|ref|YP_448280.1| - 9.3e-12 45.8 0.0 3.6e-11 43.8 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|84490048|ref|YP_448280.1| - 5.7e-10 38.7 0.0 8.7e-10 38.1 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|84490048|ref|YP_448280.1| - 0.0049 17.0 0.0 0.0067 16.6 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|84490048|ref|YP_448280.1| - 0.012 15.4 0.1 1.1 9.2 0.0 2.8 3 1 0 3 3 3 0 Haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.9 gi|84490048|ref|YP_448280.1| - 0.02 14.2 0.1 0.63 9.3 0.0 2.3 2 0 0 2 2 2 0 HAD superfamily, subfamily IIIB (Acid phosphatase) INT_SG_DDX_CT_C PF15300.1 gi|84490048|ref|YP_448280.1| - 0.037 13.4 0.0 0.073 12.5 0.0 1.4 1 0 0 1 1 1 0 INTS6/SAGE1/DDX26B/CT45 C-terminus UPF0180 PF03698.8 gi|84490048|ref|YP_448280.1| - 0.28 11.0 2.2 6.2 6.7 0.0 3.0 3 1 1 4 4 4 0 Uncharacterised protein family (UPF0180) DUF39 PF01837.11 gi|84490049|ref|YP_448281.1| - 1.9e-112 375.3 0.0 2.1e-112 375.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF39 Fer4 PF00037.22 gi|84490049|ref|YP_448281.1| - 2.6e-06 26.7 3.6 2.6e-06 26.7 2.5 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84490049|ref|YP_448281.1| - 2.5e-05 23.9 2.5 2.5e-05 23.9 1.7 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84490049|ref|YP_448281.1| - 0.0003 20.5 21.9 0.0016 18.2 1.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84490049|ref|YP_448281.1| - 0.00071 19.9 12.8 0.0011 19.3 7.6 2.3 2 1 1 3 3 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84490049|ref|YP_448281.1| - 0.0047 16.7 2.9 0.0047 16.7 2.0 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.1 gi|84490049|ref|YP_448281.1| - 0.0061 17.1 0.5 0.0061 17.1 0.3 2.3 2 0 0 2 2 1 1 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|84490049|ref|YP_448281.1| - 0.0083 16.3 12.2 0.013 15.7 2.5 2.6 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84490049|ref|YP_448281.1| - 0.025 14.6 2.0 0.025 14.6 1.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84490049|ref|YP_448281.1| - 0.033 14.5 1.2 0.033 14.5 0.9 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490049|ref|YP_448281.1| - 0.036 13.9 11.2 0.33 10.8 8.2 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84490049|ref|YP_448281.1| - 1.5 9.3 9.5 4.4 7.7 6.6 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84490049|ref|YP_448281.1| - 2.3 9.0 10.7 0.46 11.2 1.7 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain tRNA-synt_2c PF01411.14 gi|84490050|ref|YP_448282.1| - 2.2e-126 422.4 0.0 3.4e-126 421.7 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|84490050|ref|YP_448282.1| - 1.5e-12 47.1 0.5 3.4e-12 46.0 0.4 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|84490050|ref|YP_448282.1| - 8.5e-07 28.5 0.5 2e-06 27.3 0.4 1.6 1 0 0 1 1 1 1 DHHA1 domain tRNA-synt_2e PF02091.10 gi|84490050|ref|YP_448282.1| - 0.0021 17.1 0.1 0.0098 15.0 0.0 2.1 3 0 0 3 3 3 1 Glycyl-tRNA synthetase alpha subunit Ribosomal_60s PF00428.14 gi|84490051|ref|YP_448283.1| - 7.8e-19 67.8 25.6 9.2e-19 67.6 17.7 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF4139 PF13598.1 gi|84490051|ref|YP_448283.1| - 0.0062 15.8 1.8 0.007 15.7 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4139) PepSY_2 PF13670.1 gi|84490051|ref|YP_448283.1| - 0.039 13.8 11.6 4.2 7.3 0.0 2.1 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain DUF177 PF02620.12 gi|84490051|ref|YP_448283.1| - 0.084 12.9 2.0 0.099 12.6 1.4 1.2 1 0 0 1 1 1 0 Uncharacterized ACR, COG1399 Sigma70_ner PF04546.8 gi|84490051|ref|YP_448283.1| - 0.12 12.0 7.5 0.14 11.7 5.2 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region YicC_N PF03755.8 gi|84490051|ref|YP_448283.1| - 0.38 10.6 3.4 0.45 10.4 2.3 1.2 1 0 0 1 1 1 0 YicC-like family, N-terminal region DUF935 PF06074.7 gi|84490051|ref|YP_448283.1| - 0.45 9.1 5.7 0.52 8.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) Myc_N PF01056.13 gi|84490051|ref|YP_448283.1| - 0.66 9.0 5.0 0.68 9.0 3.4 1.1 1 0 0 1 1 1 0 Myc amino-terminal region DUF1631 PF07793.6 gi|84490051|ref|YP_448283.1| - 0.7 7.9 5.5 0.77 7.8 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Ribosomal_L10 PF00466.15 gi|84490052|ref|YP_448284.1| - 6.1e-22 77.4 0.2 1.4e-21 76.2 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.14 gi|84490052|ref|YP_448284.1| - 0.00013 22.2 10.3 0.00013 22.2 7.1 2.2 2 0 0 2 2 2 1 60s Acidic ribosomal protein Ribosomal_L1 PF00687.16 gi|84490053|ref|YP_448285.1| - 8e-46 156.1 0.5 9.3e-46 155.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Bac_DNA_binding PF00216.16 gi|84490053|ref|YP_448285.1| - 0.11 12.5 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Bacterial DNA-binding protein Ribosomal_L11_N PF03946.9 gi|84490054|ref|YP_448286.1| - 9.5e-27 92.2 2.6 4.9e-26 89.9 0.8 2.2 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|84490054|ref|YP_448286.1| - 6.8e-22 77.3 0.0 1.3e-21 76.5 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.8 gi|84490055|ref|YP_448287.1| - 3.5e-19 68.3 0.0 6.9e-19 67.3 0.0 1.5 2 0 0 2 2 2 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|84490055|ref|YP_448287.1| - 6.1e-07 28.9 0.1 1.3e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 KOW motif NusG PF02357.14 gi|84490055|ref|YP_448287.1| - 4.7e-05 23.5 0.0 0.00018 21.7 0.0 2.0 2 1 0 2 2 2 1 Transcription termination factor nusG SecE PF00584.15 gi|84490056|ref|YP_448288.1| - 2.5e-05 23.7 0.0 2.6e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Tubulin PF00091.20 gi|84490057|ref|YP_448289.1| - 4.8e-36 124.6 0.4 3.6e-35 121.7 0.3 2.2 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|84490057|ref|YP_448289.1| - 1.8e-32 111.2 2.2 1.8e-32 111.2 1.6 2.7 3 1 0 3 3 3 1 FtsZ family, C-terminal domain CBM_17_28 PF03424.9 gi|84490057|ref|YP_448289.1| - 0.017 14.7 0.9 0.017 14.7 0.7 1.8 2 0 0 2 2 2 0 Carbohydrate binding domain (family 17/28) ThiF PF00899.16 gi|84490057|ref|YP_448289.1| - 0.031 14.0 0.3 0.38 10.5 0.0 2.5 2 0 0 2 2 2 0 ThiF family ComA PF02679.10 gi|84490058|ref|YP_448290.1| - 3.4e-92 307.8 0.4 4.1e-92 307.6 0.3 1.0 1 0 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) Exo_endo_phos_2 PF14529.1 gi|84490058|ref|YP_448290.1| - 0.068 12.7 0.2 0.18 11.4 0.0 1.9 2 0 0 2 2 2 0 Endonuclease-reverse transcriptase F420_ligase PF01996.11 gi|84490059|ref|YP_448291.1| - 1.7e-41 141.7 0.0 2.1e-41 141.5 0.0 1.1 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase TFIIE_alpha PF02002.12 gi|84490060|ref|YP_448292.1| - 3.1e-25 87.7 1.4 4.7e-25 87.1 1.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HNH PF01844.18 gi|84490060|ref|YP_448292.1| - 0.024 14.4 0.7 2.7 7.9 0.1 2.5 2 0 0 2 2 2 0 HNH endonuclease DUF2296 PF10058.4 gi|84490060|ref|YP_448292.1| - 0.061 13.0 1.8 0.17 11.6 1.0 2.1 2 1 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) zinc_ribbon_4 PF13717.1 gi|84490060|ref|YP_448292.1| - 0.14 11.8 2.3 4.6 7.0 0.1 3.1 3 0 0 3 3 3 0 zinc-ribbon domain Rrf2 PF02082.15 gi|84490060|ref|YP_448292.1| - 0.14 12.2 0.0 0.26 11.4 0.0 1.5 1 1 0 1 1 1 0 Transcriptional regulator TF_Zn_Ribbon PF08271.7 gi|84490060|ref|YP_448292.1| - 0.18 11.1 3.3 0.54 9.6 1.4 2.4 1 1 1 2 2 2 0 TFIIB zinc-binding zinc_ribbon_5 PF13719.1 gi|84490060|ref|YP_448292.1| - 0.2 11.2 2.1 6.3 6.4 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain zf-C2H2 PF00096.21 gi|84490060|ref|YP_448292.1| - 0.34 11.3 2.0 20 5.7 0.1 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type HD PF01966.17 gi|84490061|ref|YP_448293.1| - 3e-14 53.0 1.2 3e-14 53.0 0.8 1.6 2 0 0 2 2 2 1 HD domain NAD_binding_2 PF03446.10 gi|84490061|ref|YP_448293.1| - 0.015 15.1 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase HDOD PF08668.7 gi|84490061|ref|YP_448293.1| - 0.078 12.2 0.0 1.1 8.4 0.0 2.0 1 1 0 1 1 1 0 HDOD domain TfuA PF07812.7 gi|84490062|ref|YP_448294.1| - 7.4e-46 154.4 0.0 1.3e-45 153.7 0.0 1.4 1 0 0 1 1 1 1 TfuA-like protein SLIDE PF09111.5 gi|84490062|ref|YP_448294.1| - 0.012 15.3 0.6 0.025 14.3 0.2 1.6 1 1 0 1 1 1 0 SLIDE GatB_Yqey PF02637.13 gi|84490062|ref|YP_448294.1| - 0.025 14.2 0.5 0.16 11.6 0.2 2.2 2 0 0 2 2 2 0 GatB domain Haem_bd PF14376.1 gi|84490062|ref|YP_448294.1| - 0.026 14.2 0.2 0.046 13.4 0.1 1.4 1 0 0 1 1 1 0 Haem-binding domain Patatin PF01734.17 gi|84490062|ref|YP_448294.1| - 0.059 13.2 0.0 0.084 12.7 0.0 1.2 1 0 0 1 1 1 0 Patatin-like phospholipase BTB PF00651.26 gi|84490062|ref|YP_448294.1| - 0.13 12.2 0.3 3 7.8 0.1 2.3 2 0 0 2 2 2 0 BTB/POZ domain QueC PF06508.8 gi|84490063|ref|YP_448295.1| - 2.2e-06 27.0 0.3 0.0018 17.5 0.0 3.1 3 0 0 3 3 3 2 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|84490063|ref|YP_448295.1| - 0.00012 21.7 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.15 gi|84490063|ref|YP_448295.1| - 0.00041 19.8 0.0 0.0012 18.4 0.0 1.8 2 1 0 2 2 2 1 PP-loop family NAD_synthase PF02540.12 gi|84490063|ref|YP_448295.1| - 0.0007 18.5 0.2 0.071 12.0 0.0 2.9 3 0 0 3 3 3 1 NAD synthase PAPS_reduct PF01507.14 gi|84490063|ref|YP_448295.1| - 0.039 13.7 0.7 0.3 10.8 0.0 2.5 3 1 0 3 3 3 0 Phosphoadenosine phosphosulfate reductase family CBS PF00571.23 gi|84490064|ref|YP_448296.1| - 1.2e-36 124.2 4.7 3.9e-13 48.9 0.1 4.5 4 1 0 4 4 4 4 CBS domain TraH_2 PF06871.6 gi|84490064|ref|YP_448296.1| - 0.084 12.3 0.6 6.6 6.1 0.0 2.6 3 0 0 3 3 3 0 TraH_2 DUF2263 PF10021.4 gi|84490064|ref|YP_448296.1| - 0.1 12.5 0.4 0.66 9.9 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2263) tRNA-synt_2b PF00587.20 gi|84490065|ref|YP_448297.1| - 5.4e-35 120.5 0.0 8.5e-35 119.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|84490065|ref|YP_448297.1| - 1.1e-21 76.8 6.9 2.3e-21 75.8 4.8 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain CENP-K PF11802.3 gi|84490065|ref|YP_448297.1| - 0.001 18.3 1.9 0.0021 17.3 1.3 1.5 1 0 0 1 1 1 1 Centromere-associated protein K CENP-U PF13097.1 gi|84490065|ref|YP_448297.1| - 0.0011 18.9 2.2 0.002 18.0 1.6 1.3 1 0 0 1 1 1 1 CENP-A nucleosome associated complex (NAC) subunit tRNA-synt_His PF13393.1 gi|84490065|ref|YP_448297.1| - 0.0043 16.1 0.1 2.1 7.3 0.0 2.2 2 0 0 2 2 2 2 Histidyl-tRNA synthetase zf-C4H2 PF10146.4 gi|84490065|ref|YP_448297.1| - 0.16 11.9 2.7 0.39 10.6 1.9 1.7 1 0 0 1 1 1 0 Zinc finger-containing protein RDD PF06271.7 gi|84490066|ref|YP_448298.1| - 3.9e-13 49.4 6.7 4.4e-13 49.3 4.6 1.0 1 0 0 1 1 1 1 RDD family DUF4051 PF13260.1 gi|84490066|ref|YP_448298.1| - 0.62 9.4 3.8 1.8 7.9 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) AIRS_C PF02769.17 gi|84490067|ref|YP_448299.1| - 3.3e-28 98.6 1.9 3.3e-28 98.6 1.4 1.6 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|84490067|ref|YP_448299.1| - 5.5e-15 55.3 0.2 2.3e-14 53.3 0.0 2.2 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain Ribosomal_S8e PF01201.17 gi|84490068|ref|YP_448300.1| - 8.1e-34 116.6 4.6 9e-34 116.4 3.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e DNA_pol_B PF00136.16 gi|84490069|ref|YP_448301.1| - 1.3e-36 126.4 1.8 1.7e-36 126.0 1.2 1.0 1 0 0 1 1 1 1 DNA polymerase family B Ribosomal_L22 PF00237.14 gi|84490069|ref|YP_448301.1| - 0.016 15.1 0.5 1.5 8.7 0.3 2.3 2 0 0 2 2 2 0 Ribosomal protein L22p/L17e DUF945 PF06097.6 gi|84490069|ref|YP_448301.1| - 0.082 11.6 0.0 0.19 10.4 0.0 1.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF945) ABC1 PF03109.11 gi|84490070|ref|YP_448302.1| - 6.3e-30 103.6 0.1 1.7e-29 102.2 0.1 1.8 1 0 0 1 1 1 1 ABC1 family Pkinase PF00069.20 gi|84490070|ref|YP_448302.1| - 0.00015 21.0 1.4 0.00038 19.7 0.9 1.6 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|84490070|ref|YP_448302.1| - 0.00041 20.1 0.0 0.0017 18.1 0.0 1.9 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.12 gi|84490070|ref|YP_448302.1| - 0.0017 17.4 2.0 0.22 10.5 0.0 3.2 3 0 0 3 3 3 1 Protein tyrosine kinase TP53IP5 PF15331.1 gi|84490070|ref|YP_448302.1| - 0.0063 16.4 0.1 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Cellular tumour antigen p53-inducible 5 zinc_ribbon_2 PF13240.1 gi|84490071|ref|YP_448303.1| - 2.1e-07 30.2 5.7 4.5e-07 29.1 3.9 1.6 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|84490071|ref|YP_448303.1| - 2.8e-07 29.5 4.2 5e-07 28.7 2.9 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84490071|ref|YP_448303.1| - 6.4e-05 22.6 0.7 0.00012 21.8 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon Rifin_STEVOR PF02009.11 gi|84490071|ref|YP_448303.1| - 0.00021 21.0 4.9 0.00052 19.7 2.2 2.0 1 1 1 2 2 2 1 Rifin/stevor family Nudix_N_2 PF14803.1 gi|84490071|ref|YP_448303.1| - 0.0035 16.9 1.2 2.8 7.7 0.1 2.6 2 0 0 2 2 2 2 Nudix N-terminal NOB1_Zn_bind PF08772.6 gi|84490071|ref|YP_448303.1| - 4.9 7.0 6.8 18 5.2 4.7 1.9 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like LMBR1 PF04791.11 gi|84490071|ref|YP_448303.1| - 6.9 5.1 10.5 18 3.7 7.3 1.6 1 1 0 1 1 1 0 LMBR1-like membrane protein PmbA_TldD PF01523.11 gi|84490072|ref|YP_448304.1| - 1.6e-67 227.8 0.8 2e-67 227.5 0.6 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase VWD PF00094.20 gi|84490072|ref|YP_448304.1| - 0.19 11.9 6.0 0.12 12.5 0.8 2.6 2 1 0 2 2 2 0 von Willebrand factor type D domain HypD PF01924.11 gi|84490073|ref|YP_448305.1| - 4.3e-141 469.7 0.0 4.9e-141 469.6 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family Mur_ligase_M PF08245.7 gi|84490074|ref|YP_448306.1| - 1.7e-28 99.9 7.2 5.1e-27 95.1 1.3 3.6 3 2 1 4 4 4 2 Mur ligase middle domain NAD_binding_2 PF03446.10 gi|84490074|ref|YP_448306.1| - 0.0075 16.1 0.1 0.041 13.7 0.0 2.3 3 1 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase MobB PF03205.9 gi|84490074|ref|YP_448306.1| - 0.058 13.1 0.6 0.2 11.3 0.4 1.9 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CbiA PF01656.18 gi|84490074|ref|YP_448306.1| - 0.3 10.4 5.5 1.5 8.2 0.1 3.3 1 1 1 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain NTP_transf_3 PF12804.2 gi|84490077|ref|YP_448309.1| - 2.4e-14 53.7 0.0 2.7e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|84490077|ref|YP_448309.1| - 3.1e-07 30.2 0.6 3.9e-07 29.9 0.4 1.3 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 gi|84490077|ref|YP_448309.1| - 8.3e-06 25.4 0.0 1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|84490077|ref|YP_448309.1| - 0.0025 17.1 0.1 0.0033 16.7 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase DUF169 PF02596.10 gi|84490078|ref|YP_448310.1| - 1.2e-49 168.6 0.3 3.5e-31 108.2 0.1 2.0 1 1 1 2 2 2 2 Uncharacterised ArCR, COG2043 Med1 PF10744.4 gi|84490078|ref|YP_448310.1| - 0.071 11.8 0.2 0.091 11.5 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription subunit 1 PcrB PF01884.12 gi|84490079|ref|YP_448311.1| - 1.1e-84 283.3 1.8 1.2e-84 283.2 1.2 1.0 1 0 0 1 1 1 1 PcrB family DHO_dh PF01180.16 gi|84490079|ref|YP_448311.1| - 2.8e-07 29.7 2.5 5.9e-07 28.7 0.4 2.0 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase His_biosynth PF00977.16 gi|84490079|ref|YP_448311.1| - 9.8e-07 28.2 0.4 1.7e-05 24.2 0.1 2.2 2 1 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|84490079|ref|YP_448311.1| - 4.1e-05 22.6 0.5 0.0035 16.2 0.1 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain IGPS PF00218.16 gi|84490079|ref|YP_448311.1| - 7.6e-05 21.8 0.2 0.024 13.6 0.0 2.3 2 0 0 2 2 2 2 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.15 gi|84490079|ref|YP_448311.1| - 0.00026 19.6 0.8 0.00098 17.7 0.2 1.9 2 0 0 2 2 2 1 Tryptophan synthase alpha chain NanE PF04131.9 gi|84490079|ref|YP_448311.1| - 0.0012 17.8 1.5 0.12 11.3 0.1 2.7 2 1 1 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase B12-binding PF02310.14 gi|84490079|ref|YP_448311.1| - 0.0018 18.1 0.1 1.3 8.9 0.1 2.4 2 0 0 2 2 2 2 B12 binding domain ThiG PF05690.9 gi|84490079|ref|YP_448311.1| - 0.0021 17.1 2.3 0.0047 16.0 0.1 2.3 2 1 1 3 3 3 1 Thiazole biosynthesis protein ThiG DeoC PF01791.4 gi|84490079|ref|YP_448311.1| - 0.014 14.7 0.4 0.065 12.5 0.1 1.9 2 0 0 2 2 2 0 DeoC/LacD family aldolase Peripla_BP_1 PF00532.16 gi|84490079|ref|YP_448311.1| - 0.015 14.5 0.6 0.086 12.0 0.0 2.2 2 1 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family Ribul_P_3_epim PF00834.14 gi|84490079|ref|YP_448311.1| - 0.016 14.2 0.2 0.028 13.5 0.1 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family HMGL-like PF00682.14 gi|84490079|ref|YP_448311.1| - 0.017 14.8 0.1 0.18 11.4 0.0 2.0 2 0 0 2 2 2 0 HMGL-like TMP-TENI PF02581.12 gi|84490079|ref|YP_448311.1| - 0.017 14.2 0.3 0.1 11.6 0.0 2.0 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI OMPdecase PF00215.19 gi|84490079|ref|YP_448311.1| - 0.022 14.1 0.2 5.3 6.3 0.0 2.2 2 0 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Aldolase PF01081.14 gi|84490079|ref|YP_448311.1| - 0.027 13.6 0.5 0.13 11.4 0.1 2.0 2 0 0 2 2 2 0 KDPG and KHG aldolase FMN_dh PF01070.13 gi|84490079|ref|YP_448311.1| - 0.053 12.3 0.3 0.46 9.2 0.2 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase G3P_antiterm PF04309.7 gi|84490079|ref|YP_448311.1| - 0.12 11.4 1.7 1 8.3 0.2 2.2 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator Dus PF01207.12 gi|84490079|ref|YP_448311.1| - 0.12 11.1 0.5 0.51 9.1 0.0 2.0 2 1 0 2 2 2 0 Dihydrouridine synthase (Dus) zf-ribbon_3 PF13248.1 gi|84490080|ref|YP_448312.1| - 0.00023 20.2 1.6 0.00029 19.9 1.1 1.2 1 0 0 1 1 1 1 zinc-ribbon domain Ribosomal_L40e PF01020.12 gi|84490080|ref|YP_448312.1| - 0.00075 19.0 4.0 0.00085 18.8 2.7 1.1 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.1 gi|84490080|ref|YP_448312.1| - 0.00078 18.8 2.7 0.0011 18.4 1.8 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|84490080|ref|YP_448312.1| - 0.00092 18.9 1.0 0.00098 18.8 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-DHHC PF01529.15 gi|84490080|ref|YP_448312.1| - 0.0018 17.6 0.8 0.0019 17.6 0.5 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase zf-RanBP PF00641.13 gi|84490080|ref|YP_448312.1| - 0.044 12.8 3.5 0.062 12.4 2.4 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF2082 PF09855.4 gi|84490080|ref|YP_448312.1| - 0.21 11.4 3.8 1.1 9.1 0.1 2.1 1 1 2 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) UPF0547 PF10571.4 gi|84490080|ref|YP_448312.1| - 0.48 10.1 4.2 2.8 7.7 2.9 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 RNA_POL_M_15KD PF02150.11 gi|84490080|ref|YP_448312.1| - 0.7 9.6 5.9 19 5.0 3.8 2.2 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit DNA_RNApol_7kD PF03604.8 gi|84490080|ref|YP_448312.1| - 0.83 9.1 4.2 1.5 8.3 2.9 1.5 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF367 PF04034.8 gi|84490081|ref|YP_448313.1| - 5.3e-52 174.7 0.1 7e-52 174.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|84490081|ref|YP_448313.1| - 8.2e-08 31.6 0.4 8.2e-08 31.6 0.3 2.0 2 0 0 2 2 2 1 Possible Fer4-like domain in RNase L inhibitor, RLI COLFI PF01410.13 gi|84490081|ref|YP_448313.1| - 0.064 12.6 0.1 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Fibrillar collagen C-terminal domain DUF116 PF01976.12 gi|84490082|ref|YP_448314.1| - 1.3e-43 148.2 4.8 1.6e-43 147.9 3.3 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 Nitro_FeMo-Co PF02579.12 gi|84490083|ref|YP_448315.1| - 1.7e-16 60.0 0.1 2e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor AnfO_nitrog PF09582.5 gi|84490083|ref|YP_448315.1| - 5.2e-05 22.4 1.2 6.1e-05 22.2 0.8 1.1 1 0 0 1 1 1 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) HTH_WhiA PF02650.9 gi|84490084|ref|YP_448316.1| - 0.34 11.3 1.8 0.62 10.4 0.1 2.2 3 0 0 3 3 3 0 WhiA C-terminal HTH domain Ribosomal_S3Ae PF01015.13 gi|84490085|ref|YP_448317.1| - 3.4e-63 212.5 6.9 3.7e-63 212.3 4.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF2271 PF10029.4 gi|84490085|ref|YP_448317.1| - 0.0033 16.9 0.4 0.007 15.8 0.3 1.4 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2271) Chlam_vir PF05475.6 gi|84490085|ref|YP_448317.1| - 0.087 11.9 0.6 0.1 11.6 0.4 1.2 1 0 0 1 1 1 0 Chlamydia virulence protein PGP3-D PNPase PF03726.9 gi|84490085|ref|YP_448317.1| - 0.095 12.9 2.1 6.5 7.0 0.0 2.4 2 0 0 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DUF4382 PF14321.1 gi|84490085|ref|YP_448317.1| - 0.12 12.4 0.1 0.22 11.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4382) DUF92 PF01940.11 gi|84490086|ref|YP_448318.1| - 3.5e-56 189.8 18.1 4.7e-56 189.4 12.5 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF92 PhosphMutase PF10143.4 gi|84490087|ref|YP_448319.1| - 1.4e-64 216.8 0.0 2e-64 216.3 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|84490087|ref|YP_448319.1| - 7.7e-57 192.5 0.5 8.9e-57 192.3 0.4 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|84490087|ref|YP_448319.1| - 0.0001 21.7 0.1 0.00061 19.2 0.0 2.0 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Alk_phosphatase PF00245.15 gi|84490087|ref|YP_448319.1| - 0.18 10.4 1.8 0.52 8.9 0.3 2.3 2 1 0 2 2 2 0 Alkaline phosphatase PGM_PMM_I PF02878.11 gi|84490088|ref|YP_448320.1| - 3.1e-45 153.0 0.0 5e-45 152.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|84490088|ref|YP_448320.1| - 4.3e-27 94.4 0.1 9.8e-27 93.3 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|84490088|ref|YP_448320.1| - 2.3e-17 63.0 0.0 1.2e-16 60.7 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|84490088|ref|YP_448320.1| - 1e-12 47.8 0.1 2.7e-12 46.5 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain OpuAC PF04069.7 gi|84490088|ref|YP_448320.1| - 0.047 13.0 0.1 0.09 12.1 0.1 1.5 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system NTP_transferase PF00483.18 gi|84490089|ref|YP_448321.1| - 3.5e-48 164.0 0.0 4.9e-48 163.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|84490089|ref|YP_448321.1| - 1.2e-16 59.4 23.4 6e-07 28.6 0.2 4.8 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|84490089|ref|YP_448321.1| - 1.7e-14 54.2 0.0 2.2e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|84490089|ref|YP_448321.1| - 1.1e-08 34.4 13.3 1.2e-05 24.7 0.1 4.2 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|84490089|ref|YP_448321.1| - 0.014 14.8 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NiFeSe_Hases PF00374.14 gi|84490090|ref|YP_448322.1| - 1.4e-53 182.4 5.1 7.8e-29 100.8 0.2 4.1 1 1 2 3 3 3 3 Nickel-dependent hydrogenase HycI PF01750.13 gi|84490091|ref|YP_448323.1| - 9.1e-22 76.9 0.1 1.1e-21 76.7 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease Oxidored_q6 PF01058.17 gi|84490092|ref|YP_448324.1| - 1.7e-26 92.3 3.2 2.7e-26 91.6 0.0 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|84490092|ref|YP_448324.1| - 1.7e-09 36.8 11.9 2e-07 30.3 0.7 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84490092|ref|YP_448324.1| - 8.8e-08 31.8 11.8 2.1e-07 30.6 8.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84490092|ref|YP_448324.1| - 1.9e-07 31.3 12.5 5.3e-07 29.9 8.7 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84490092|ref|YP_448324.1| - 7.6e-07 28.6 14.3 0.00065 19.4 1.9 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84490092|ref|YP_448324.1| - 9.8e-07 28.9 12.0 2.9e-06 27.4 8.3 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490092|ref|YP_448324.1| - 3.4e-05 23.5 2.2 3.4e-05 23.5 1.5 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.1 gi|84490092|ref|YP_448324.1| - 0.00099 19.6 0.5 0.00099 19.6 0.3 2.9 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|84490092|ref|YP_448324.1| - 0.0012 18.9 2.9 0.0012 18.9 2.0 3.0 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84490092|ref|YP_448324.1| - 0.0013 19.4 12.9 0.0052 17.5 2.3 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|84490092|ref|YP_448324.1| - 0.002 17.9 17.3 0.018 14.8 10.3 2.6 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84490092|ref|YP_448324.1| - 0.014 15.4 19.0 0.094 12.7 11.4 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84490092|ref|YP_448324.1| - 0.034 14.4 18.3 0.23 11.8 3.1 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490092|ref|YP_448324.1| - 0.076 13.6 7.6 0.076 13.6 5.3 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84490092|ref|YP_448324.1| - 0.94 9.9 16.5 0.2 12.0 2.1 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|84490092|ref|YP_448324.1| - 2.5 8.5 19.0 0.12 12.7 4.0 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain FrhB_FdhB_C PF04432.8 gi|84490093|ref|YP_448325.1| - 2.7e-47 160.1 0.0 3.8e-47 159.6 0.0 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|84490093|ref|YP_448325.1| - 1.4e-32 111.3 0.1 3.3e-32 110.1 0.1 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term DUF45 PF01863.12 gi|84490094|ref|YP_448326.1| - 8.9e-35 120.3 0.3 1e-31 110.3 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF45 WLM PF08325.5 gi|84490094|ref|YP_448326.1| - 0.00027 20.8 0.2 0.00083 19.2 0.0 1.7 2 0 0 2 2 2 1 WLM domain SprT-like PF10263.4 gi|84490094|ref|YP_448326.1| - 0.0016 18.1 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 SprT-like family DUF955 PF06114.8 gi|84490094|ref|YP_448326.1| - 0.058 13.1 0.2 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF955) Peptidase_M10 PF00413.19 gi|84490094|ref|YP_448326.1| - 0.1 12.3 0.0 0.13 12.0 0.0 1.2 1 1 0 1 1 1 0 Matrixin FAD_binding_3 PF01494.14 gi|84490095|ref|YP_448327.1| - 1e-18 67.5 0.6 1e-12 47.8 0.1 3.0 2 1 0 2 2 2 2 FAD binding domain DAO PF01266.19 gi|84490095|ref|YP_448327.1| - 2.2e-09 36.7 0.1 8.5e-05 21.6 0.1 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|84490095|ref|YP_448327.1| - 1.4e-08 34.2 0.3 5.1e-08 32.4 0.2 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|84490095|ref|YP_448327.1| - 3.6e-08 32.6 0.0 7e-08 31.7 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|84490095|ref|YP_448327.1| - 3.6e-07 28.9 0.1 8.7e-07 27.7 0.1 1.6 1 0 0 1 1 1 1 HI0933-like protein Trp_halogenase PF04820.9 gi|84490095|ref|YP_448327.1| - 4e-07 29.0 0.0 0.00043 19.0 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.9 gi|84490095|ref|YP_448327.1| - 2.1e-06 27.7 0.5 4e-06 26.8 0.0 1.8 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|84490095|ref|YP_448327.1| - 2.6e-06 26.6 0.0 0.0032 16.4 0.1 2.8 2 1 0 2 2 2 2 Lycopene cyclase protein Thi4 PF01946.12 gi|84490095|ref|YP_448327.1| - 2.7e-06 26.6 0.8 2.6e-05 23.4 0.1 2.6 2 1 1 3 3 3 1 Thi4 family NAD_binding_8 PF13450.1 gi|84490095|ref|YP_448327.1| - 3.3e-06 27.0 0.2 1e-05 25.4 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|84490095|ref|YP_448327.1| - 7.6e-05 21.7 0.3 7.6e-05 21.7 0.2 2.0 2 1 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.1 gi|84490095|ref|YP_448327.1| - 0.00073 19.6 0.0 0.0016 18.5 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.1 gi|84490095|ref|YP_448327.1| - 0.0036 17.5 0.3 0.0089 16.2 0.0 2.0 2 1 0 2 2 2 1 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|84490095|ref|YP_448327.1| - 0.0063 16.6 0.4 0.034 14.2 0.1 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.16 gi|84490095|ref|YP_448327.1| - 0.019 14.5 0.0 0.042 13.4 0.0 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.13 gi|84490095|ref|YP_448327.1| - 0.07 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox PF00070.22 gi|84490095|ref|YP_448327.1| - 0.074 13.4 1.3 0.62 10.4 0.1 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Adenine_deam_C PF13382.1 gi|84490096|ref|YP_448328.1| - 4.5e-61 204.9 0.6 8.1e-61 204.1 0.4 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|84490096|ref|YP_448328.1| - 8.2e-38 130.8 0.1 2e-25 90.1 0.0 2.2 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|84490096|ref|YP_448328.1| - 1.4e-13 51.5 0.0 9.4e-08 32.4 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_5 PF13594.1 gi|84490096|ref|YP_448328.1| - 2.2e-09 37.0 1.6 5.9e-09 35.6 0.4 2.4 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|84490096|ref|YP_448328.1| - 6e-07 29.0 0.0 0.0019 17.4 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family DUF447 PF04289.7 gi|84490097|ref|YP_448329.1| - 3.9e-40 137.2 1.4 4.4e-40 137.1 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) IF3_C PF00707.17 gi|84490097|ref|YP_448329.1| - 0.031 14.0 0.1 10 5.9 0.0 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-3, C-terminal domain HHH_4 PF14490.1 gi|84490097|ref|YP_448329.1| - 0.037 13.7 0.5 0.66 9.7 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix containing domain Halogen_Hydrol PF10112.4 gi|84490098|ref|YP_448330.1| - 0.2 11.0 4.7 0.2 11.0 3.2 1.0 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF4131 PF13567.1 gi|84490098|ref|YP_448330.1| - 0.21 10.9 2.6 0.22 10.8 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) UPF0118 PF01594.11 gi|84490098|ref|YP_448330.1| - 0.3 10.0 10.7 0.35 9.8 7.4 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF20 Tic20 PF09685.5 gi|84490098|ref|YP_448330.1| - 0.31 11.0 9.8 0.3 11.0 6.8 1.0 1 0 0 1 1 1 0 Tic20-like protein YlaH PF14036.1 gi|84490098|ref|YP_448330.1| - 0.34 11.0 12.2 0.4 10.7 8.5 1.1 1 0 0 1 1 1 0 YlaH-like protein TRAP-gamma PF07074.7 gi|84490098|ref|YP_448330.1| - 0.37 10.3 4.6 0.43 10.0 3.2 1.0 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF3487 PF11990.3 gi|84490098|ref|YP_448330.1| - 0.65 9.3 4.6 0.67 9.3 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) RseC_MucC PF04246.7 gi|84490098|ref|YP_448330.1| - 0.81 9.2 2.9 0.86 9.1 2.0 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC RDD PF06271.7 gi|84490098|ref|YP_448330.1| - 1 9.2 9.3 1.1 9.1 6.5 1.1 1 0 0 1 1 1 0 RDD family IncA PF04156.9 gi|84490098|ref|YP_448330.1| - 1 8.8 4.4 1 8.8 3.1 1.1 1 0 0 1 1 1 0 IncA protein VirB3 PF05101.8 gi|84490098|ref|YP_448330.1| - 1.4 8.9 5.2 1.7 8.6 3.6 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF4181 PF13789.1 gi|84490098|ref|YP_448330.1| - 1.8 8.4 11.0 1.9 8.4 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) TcpE PF12648.2 gi|84490098|ref|YP_448330.1| - 2 8.5 8.7 2.3 8.3 6.0 1.1 1 0 0 1 1 1 0 TcpE family DUF1129 PF06570.6 gi|84490098|ref|YP_448330.1| - 3 7.0 6.5 3 7.0 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF1385 PF07136.6 gi|84490098|ref|YP_448330.1| - 3.2 6.7 7.2 3.8 6.5 5.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) DUF2207 PF09972.4 gi|84490098|ref|YP_448330.1| - 3.8 5.9 8.5 3.8 5.9 5.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) GATase PF00117.23 gi|84490099|ref|YP_448331.1| - 2.6e-40 137.9 0.3 3.1e-40 137.6 0.2 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|84490099|ref|YP_448331.1| - 2.1e-13 50.2 0.0 3.8e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase C26 GMP_synt_C PF00958.17 gi|84490100|ref|YP_448332.1| - 9.6e-30 102.1 0.0 2e-29 101.1 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|84490100|ref|YP_448332.1| - 3.5e-11 42.4 0.3 2.9e-07 29.6 0.0 2.2 2 0 0 2 2 2 2 NAD synthase Asn_synthase PF00733.16 gi|84490100|ref|YP_448332.1| - 8.6e-06 25.4 0.1 1.7e-05 24.4 0.1 1.4 1 1 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.11 gi|84490100|ref|YP_448332.1| - 2.6e-05 22.9 0.0 0.00016 20.3 0.0 1.9 2 0 0 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.15 gi|84490100|ref|YP_448332.1| - 5.4e-05 22.7 0.0 9.1e-05 22.0 0.0 1.5 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.14 gi|84490100|ref|YP_448332.1| - 0.00011 22.0 0.0 0.00019 21.2 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.9 gi|84490100|ref|YP_448332.1| - 0.00063 19.2 0.1 0.0015 18.0 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.8 gi|84490100|ref|YP_448332.1| - 0.0017 17.6 0.0 0.012 14.8 0.0 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Arginosuc_synth PF00764.14 gi|84490100|ref|YP_448332.1| - 0.08 11.9 0.2 0.19 10.7 0.1 1.6 2 0 0 2 2 2 0 Arginosuccinate synthase DUF815 PF05673.8 gi|84490101|ref|YP_448333.1| - 1.6e-92 308.9 0.2 2.4e-92 308.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_16 PF13191.1 gi|84490101|ref|YP_448333.1| - 2.2e-06 27.8 0.0 0.00012 22.1 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|84490101|ref|YP_448333.1| - 2.6e-06 27.6 0.2 2.4e-05 24.5 0.0 2.7 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|84490101|ref|YP_448333.1| - 0.00027 21.0 0.1 0.0012 19.0 0.0 2.0 1 1 1 2 2 2 1 AAA domain Torsin PF06309.6 gi|84490101|ref|YP_448333.1| - 0.0013 18.6 0.1 0.0028 17.5 0.0 1.5 1 0 0 1 1 1 1 Torsin T2SE PF00437.15 gi|84490101|ref|YP_448333.1| - 0.0016 17.4 0.0 0.003 16.5 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein UvsY PF11056.3 gi|84490101|ref|YP_448333.1| - 0.0023 18.0 1.3 0.0075 16.4 0.9 1.9 1 0 0 1 1 1 1 Recombination, repair and ssDNA binding protein UvsY AAA_29 PF13555.1 gi|84490101|ref|YP_448333.1| - 0.0033 16.9 0.0 0.007 15.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|84490101|ref|YP_448333.1| - 0.0059 16.9 0.1 0.015 15.5 0.0 1.8 2 0 0 2 2 1 1 ABC transporter MobB PF03205.9 gi|84490101|ref|YP_448333.1| - 0.0083 15.8 0.0 0.14 11.8 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Bac_DnaA PF00308.13 gi|84490101|ref|YP_448333.1| - 0.012 15.2 0.3 0.028 14.0 0.2 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_10 PF12846.2 gi|84490101|ref|YP_448333.1| - 0.013 14.9 0.0 0.031 13.7 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain AAA_30 PF13604.1 gi|84490101|ref|YP_448333.1| - 0.014 15.0 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|84490101|ref|YP_448333.1| - 0.014 15.5 0.6 0.063 13.4 0.1 2.3 1 1 0 2 2 2 0 RNA helicase Miro PF08477.8 gi|84490101|ref|YP_448333.1| - 0.018 15.5 0.0 0.062 13.8 0.0 2.0 1 0 0 1 1 1 0 Miro-like protein TrwB_AAD_bind PF10412.4 gi|84490101|ref|YP_448333.1| - 0.023 13.3 0.0 0.044 12.4 0.0 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Sigma54_activat PF00158.21 gi|84490101|ref|YP_448333.1| - 0.048 13.1 0.0 0.086 12.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.1 gi|84490101|ref|YP_448333.1| - 0.051 13.3 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain Arch_ATPase PF01637.13 gi|84490101|ref|YP_448333.1| - 0.061 13.0 8.1 0.35 10.5 0.0 3.5 2 1 2 4 4 4 0 Archaeal ATPase Viral_helicase1 PF01443.13 gi|84490101|ref|YP_448333.1| - 0.094 12.2 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase FtsK_SpoIIIE PF01580.13 gi|84490101|ref|YP_448333.1| - 0.13 11.7 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_17 PF13207.1 gi|84490101|ref|YP_448333.1| - 0.18 12.6 1.4 0.92 10.3 0.0 2.6 3 0 0 3 3 2 0 AAA domain DUF87 PF01935.12 gi|84490101|ref|YP_448333.1| - 0.21 11.3 4.4 0.24 11.2 0.3 2.9 2 1 1 3 3 3 0 Domain of unknown function DUF87 F420_oxidored PF03807.12 gi|84490102|ref|YP_448334.1| - 1.3e-12 47.9 0.0 9.3e-12 45.2 0.0 2.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|84490102|ref|YP_448334.1| - 0.0004 20.1 0.2 0.013 15.1 0.1 2.4 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|84490102|ref|YP_448334.1| - 0.00074 19.4 0.0 0.0027 17.5 0.0 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Semialdhyde_dh PF01118.19 gi|84490102|ref|YP_448334.1| - 0.0029 17.8 0.0 0.0077 16.5 0.0 1.9 1 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain P5CR_dimer PF14748.1 gi|84490102|ref|YP_448334.1| - 0.0091 15.9 0.0 0.017 15.1 0.0 1.5 1 1 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation 2-Hacid_dh_C PF02826.14 gi|84490102|ref|YP_448334.1| - 0.012 14.7 0.1 0.024 13.7 0.1 1.6 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ldh_1_N PF00056.18 gi|84490102|ref|YP_448334.1| - 0.022 14.5 0.1 0.082 12.7 0.0 1.9 1 1 1 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain DUF650 PF04894.7 gi|84490103|ref|YP_448335.1| - 1.6e-85 286.8 1.3 2.2e-85 286.4 0.9 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|84490103|ref|YP_448335.1| - 1.7e-37 127.3 0.1 3.5e-37 126.3 0.1 1.6 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) Aminotran_5 PF00266.14 gi|84490104|ref|YP_448336.1| - 0.037 12.7 0.2 0.1 11.3 0.0 1.7 2 0 0 2 2 2 0 Aminotransferase class-V CGI-121 PF08617.5 gi|84490105|ref|YP_448337.1| - 1.3e-23 83.4 4.7 1.7e-23 83.0 3.3 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 DUF1975 PF09318.5 gi|84490105|ref|YP_448337.1| - 0.038 13.5 5.8 0.37 10.3 4.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF1975) 7TMR-HDED PF07697.6 gi|84490105|ref|YP_448337.1| - 0.051 13.3 1.9 0.091 12.4 1.3 1.4 1 1 0 1 1 1 0 7TM-HD extracellular Prenyltransf PF01255.14 gi|84490105|ref|YP_448337.1| - 0.074 12.1 1.2 0.09 11.8 0.8 1.3 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase Cas_NE0113 PF09623.5 gi|84490105|ref|YP_448337.1| - 0.24 10.8 3.6 0.13 11.7 0.4 1.8 2 0 0 2 2 2 0 CRISPR-associated protein NE0113 (Cas_NE0113) HMGL-like PF00682.14 gi|84490106|ref|YP_448338.1| - 2.5e-69 233.5 0.8 3.6e-69 233.0 0.1 1.6 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.5 gi|84490106|ref|YP_448338.1| - 7.1e-32 109.9 3.3 1.6e-31 108.8 2.3 1.6 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF4032 PF13224.1 gi|84490106|ref|YP_448338.1| - 0.078 12.6 0.3 1.2 8.7 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4032) UPF0020 PF01170.13 gi|84490107|ref|YP_448339.1| - 3.9e-39 134.0 0.0 6e-39 133.4 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_26 PF13659.1 gi|84490107|ref|YP_448339.1| - 1.5e-13 50.7 0.0 2.2e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|84490107|ref|YP_448339.1| - 2.4e-11 43.5 0.3 1.2e-09 37.9 0.1 2.2 2 0 0 2 2 2 1 DNA methylase Methyltransf_31 PF13847.1 gi|84490107|ref|YP_448339.1| - 3.4e-11 42.9 0.1 6.3e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain THUMP PF02926.12 gi|84490107|ref|YP_448339.1| - 8.7e-10 38.6 0.1 2.8e-09 37.0 0.1 1.9 1 1 0 1 1 1 1 THUMP domain MTS PF05175.9 gi|84490107|ref|YP_448339.1| - 8.6e-07 28.4 0.0 1.5e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_Mtase PF02384.11 gi|84490107|ref|YP_448339.1| - 2.1e-05 23.7 0.0 3.7e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase Cons_hypoth95 PF03602.10 gi|84490107|ref|YP_448339.1| - 0.0001 21.7 0.0 0.00018 20.9 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MethyltransfD12 PF02086.10 gi|84490107|ref|YP_448339.1| - 0.00017 21.1 2.9 0.0035 16.8 0.0 2.9 3 1 1 4 4 4 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_18 PF12847.2 gi|84490107|ref|YP_448339.1| - 0.00088 19.8 0.0 0.0015 19.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|84490107|ref|YP_448339.1| - 0.021 14.3 0.0 0.058 12.9 0.0 1.7 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.13 gi|84490107|ref|YP_448339.1| - 0.066 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DAO PF01266.19 gi|84490108|ref|YP_448340.1| - 2.6e-09 36.4 0.0 5.6e-06 25.5 0.0 2.5 2 1 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|84490108|ref|YP_448340.1| - 1.6e-07 30.3 0.0 2.6e-05 23.0 0.0 2.3 2 1 0 2 2 2 2 Tryptophan halogenase HI0933_like PF03486.9 gi|84490108|ref|YP_448340.1| - 2e-07 29.8 0.2 6e-07 28.2 0.0 1.9 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|84490108|ref|YP_448340.1| - 4.6e-07 29.7 0.0 1.2e-06 28.4 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|84490108|ref|YP_448340.1| - 7e-07 29.5 1.1 0.00012 22.4 0.0 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|84490108|ref|YP_448340.1| - 8.3e-05 21.7 1.1 0.00066 18.8 0.7 2.1 1 1 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.9 gi|84490108|ref|YP_448340.1| - 8.8e-05 22.4 0.2 0.0002 21.2 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|84490108|ref|YP_448340.1| - 0.00015 20.7 0.0 0.00028 19.8 0.0 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A ApbA PF02558.11 gi|84490108|ref|YP_448340.1| - 0.00019 20.9 0.0 0.00037 19.9 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.1 gi|84490108|ref|YP_448340.1| - 0.00049 20.2 0.1 0.005 16.9 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|84490108|ref|YP_448340.1| - 0.00054 18.9 0.0 0.0089 14.9 0.0 2.3 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.2 gi|84490108|ref|YP_448340.1| - 0.0014 17.8 0.0 0.0023 17.0 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase 3HCDH_N PF02737.13 gi|84490108|ref|YP_448340.1| - 0.0059 16.2 0.0 0.015 14.9 0.0 1.7 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|84490108|ref|YP_448340.1| - 0.012 14.7 0.0 0.77 8.7 0.0 2.7 1 1 0 2 2 2 0 FAD binding domain FAD_binding_2 PF00890.19 gi|84490108|ref|YP_448340.1| - 0.071 11.9 0.0 0.15 10.8 0.0 1.5 2 0 0 2 2 2 0 FAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|84490108|ref|YP_448340.1| - 0.086 12.2 0.4 0.27 10.5 0.1 1.9 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.1 gi|84490108|ref|YP_448340.1| - 0.098 12.9 0.0 0.2 11.9 0.0 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding bPH_2 PF03703.9 gi|84490109|ref|YP_448341.1| - 1.9e-17 63.0 0.1 3.5e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial PH domain bPH_3 PF14470.1 gi|84490109|ref|YP_448341.1| - 0.00044 20.4 0.7 0.00044 20.4 0.5 2.4 1 1 2 3 3 3 1 Bacterial PH domain bPH_4 PF06713.6 gi|84490109|ref|YP_448341.1| - 0.0049 16.7 0.3 0.012 15.4 0.2 1.7 1 0 0 1 1 1 1 Bacterial PH domain bPH_5 PF10882.3 gi|84490109|ref|YP_448341.1| - 0.066 13.0 1.4 0.097 12.4 0.2 1.8 2 0 0 2 2 2 0 Bacterial PH domain PgaD PF13994.1 gi|84490109|ref|YP_448341.1| - 3.5 7.0 5.5 8.5 5.8 3.8 1.7 1 1 0 1 1 1 0 PgaD-like protein ApbE PF02424.10 gi|84490110|ref|YP_448342.1| - 7.1e-16 58.2 0.0 9.6e-16 57.8 0.0 1.1 1 0 0 1 1 1 1 ApbE family ERF PF04404.7 gi|84490110|ref|YP_448342.1| - 0.039 13.4 0.1 0.069 12.6 0.1 1.3 1 0 0 1 1 1 0 ERF superfamily TPR_11 PF13414.1 gi|84490111|ref|YP_448343.1| - 7.9e-61 201.6 18.8 8.7e-18 63.7 0.1 4.7 2 1 3 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|84490111|ref|YP_448343.1| - 2e-52 172.7 16.3 1.8e-09 36.8 0.3 7.2 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|84490111|ref|YP_448343.1| - 5e-46 150.9 5.7 5.3e-07 29.0 0.0 7.2 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_12 PF13424.1 gi|84490111|ref|YP_448343.1| - 4.8e-42 141.7 19.3 4.8e-09 36.0 0.4 4.6 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|84490111|ref|YP_448343.1| - 2.9e-34 114.2 17.7 1.7e-06 27.4 0.0 7.3 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_17 PF13431.1 gi|84490111|ref|YP_448343.1| - 4e-33 110.8 18.7 1.4e-06 27.9 0.9 7.8 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|84490111|ref|YP_448343.1| - 1.7e-23 82.6 0.0 2.6e-07 31.1 0.0 4.9 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|84490111|ref|YP_448343.1| - 7.6e-23 78.9 0.0 0.0013 19.1 0.0 6.4 2 2 5 7 7 7 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|84490111|ref|YP_448343.1| - 3.7e-22 78.4 0.8 1.2e-06 28.7 0.0 4.3 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|84490111|ref|YP_448343.1| - 3.5e-20 70.1 1.4 0.00022 20.7 0.0 6.8 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|84490111|ref|YP_448343.1| - 9.7e-17 60.5 0.0 1.8e-05 24.4 0.0 4.2 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|84490111|ref|YP_448343.1| - 6.5e-13 48.2 1.7 0.039 14.4 0.0 6.7 8 0 0 8 8 7 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|84490111|ref|YP_448343.1| - 2.4e-12 46.7 8.3 8.4e-05 22.6 0.5 4.1 1 1 3 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|84490111|ref|YP_448343.1| - 4.4e-10 39.1 1.4 0.079 12.9 0.1 6.2 6 0 0 6 6 6 2 Tetratricopeptide repeat MIT PF04212.13 gi|84490111|ref|YP_448343.1| - 1.7e-07 30.9 3.1 0.58 10.0 0.1 5.5 6 0 0 6 6 6 2 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.1 gi|84490111|ref|YP_448343.1| - 2e-07 30.7 6.7 0.037 13.9 0.0 5.6 4 1 2 6 6 6 2 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.3 gi|84490111|ref|YP_448343.1| - 6.1e-06 25.2 5.6 0.034 12.9 0.2 3.6 1 1 3 4 4 4 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|84490111|ref|YP_448343.1| - 7.4e-06 25.2 0.8 0.011 14.7 0.3 3.0 1 1 3 4 4 4 4 Tetratricopeptide repeat DUF3856 PF12968.2 gi|84490111|ref|YP_448343.1| - 0.00039 20.2 0.8 0.3 10.8 0.0 4.2 2 2 2 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_5 PF12688.2 gi|84490111|ref|YP_448343.1| - 0.00086 19.3 0.0 0.092 12.7 0.0 2.6 2 2 0 2 2 2 1 Tetratrico peptide repeat FAT PF02259.18 gi|84490111|ref|YP_448343.1| - 0.0019 17.2 1.2 0.0047 15.9 0.8 1.7 1 1 0 1 1 1 1 FAT domain BTAD PF03704.12 gi|84490111|ref|YP_448343.1| - 0.0036 17.6 0.0 0.08 13.2 0.0 2.8 2 1 2 4 4 3 1 Bacterial transcriptional activator domain ASCH PF04266.9 gi|84490111|ref|YP_448343.1| - 0.0051 17.1 0.1 0.011 16.1 0.1 1.5 1 0 0 1 1 1 1 ASCH domain Coatomer_E PF04733.9 gi|84490111|ref|YP_448343.1| - 0.033 13.3 3.3 0.43 9.7 1.6 2.8 1 1 1 2 2 2 0 Coatomer epsilon subunit ATP13 PF12921.2 gi|84490111|ref|YP_448343.1| - 0.035 13.4 0.9 0.2 11.0 0.1 2.4 2 1 1 3 3 3 0 Mitochondrial ATPase expression Radical_SAM PF04055.16 gi|84490112|ref|YP_448344.1| - 5.5e-17 62.4 0.2 9.7e-17 61.6 0.1 1.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|84490112|ref|YP_448344.1| - 3.6e-14 53.0 0.1 2.2e-13 50.5 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|84490112|ref|YP_448344.1| - 1.5e-10 41.0 0.0 6.8e-10 39.0 0.0 1.9 2 1 0 2 2 2 1 4Fe-4S single cluster domain CH PF00307.26 gi|84490112|ref|YP_448344.1| - 0.063 13.3 0.2 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Calponin homology (CH) domain MoCF_biosynth PF00994.19 gi|84490112|ref|YP_448344.1| - 0.068 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Probable molybdopterin binding domain Hexapep PF00132.19 gi|84490113|ref|YP_448345.1| - 2.2e-21 74.3 15.5 1.8e-08 33.4 1.5 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|84490113|ref|YP_448345.1| - 4.8e-11 42.0 14.7 6e-07 28.9 3.7 4.0 2 2 2 4 4 4 3 Hexapeptide repeat of succinyl-transferase Pepsin-I3 PF06394.8 gi|84490113|ref|YP_448345.1| - 0.098 12.3 0.5 2.2 7.9 0.0 2.7 1 1 0 2 2 2 0 Pepsin inhibitor-3-like repeated domain Fucokinase PF07959.7 gi|84490113|ref|YP_448345.1| - 0.13 10.8 1.0 0.21 10.1 0.7 1.3 1 1 0 1 1 1 0 L-fucokinase Aminotran_1_2 PF00155.16 gi|84490114|ref|YP_448346.1| - 7.2e-58 196.2 0.0 8.8e-58 195.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|84490114|ref|YP_448346.1| - 6.2e-15 54.8 0.7 4.4e-11 42.1 0.1 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|84490114|ref|YP_448346.1| - 1.5e-08 33.3 0.1 2.2e-08 32.8 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.8 gi|84490114|ref|YP_448346.1| - 3.8e-06 25.7 0.4 1.6e-05 23.7 0.1 1.9 1 1 0 2 2 2 1 Allinase DegT_DnrJ_EryC1 PF01041.12 gi|84490114|ref|YP_448346.1| - 8e-05 21.8 0.1 0.00011 21.3 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Sortase PF04203.8 gi|84490114|ref|YP_448346.1| - 0.0051 16.4 0.1 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 Sortase family HTH_23 PF13384.1 gi|84490114|ref|YP_448346.1| - 0.09 12.4 0.0 1.6 8.4 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.11 gi|84490114|ref|YP_448346.1| - 0.1 11.8 0.1 0.29 10.4 0.1 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 PvlArgDC PF01862.11 gi|84490115|ref|YP_448347.1| - 2.5e-35 121.5 0.0 2.7e-35 121.3 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Lon_C PF05362.8 gi|84490116|ref|YP_448348.1| - 6e-84 280.4 0.4 3.9e-83 277.7 0.3 2.1 2 0 0 2 2 2 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.24 gi|84490116|ref|YP_448348.1| - 2.6e-20 72.9 0.0 7.4e-20 71.4 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) LON PF02190.11 gi|84490116|ref|YP_448348.1| - 3.1e-17 62.9 6.8 3.1e-17 62.9 4.7 2.3 2 1 0 2 2 2 1 ATP-dependent protease La (LON) domain ChlI PF13541.1 gi|84490116|ref|YP_448348.1| - 5.3e-12 45.3 0.3 1e-11 44.3 0.2 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|84490116|ref|YP_448348.1| - 1.1e-09 38.1 0.0 1.8e-08 34.1 0.0 3.1 4 0 0 4 4 3 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|84490116|ref|YP_448348.1| - 3.2e-06 26.3 0.9 0.00044 19.3 0.0 3.4 2 1 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_PrkA PF08298.6 gi|84490116|ref|YP_448348.1| - 4.7e-06 25.5 0.0 1.1e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.1 gi|84490116|ref|YP_448348.1| - 1.8e-05 24.8 0.3 0.0001 22.3 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|84490116|ref|YP_448348.1| - 0.0001 22.4 0.1 0.0014 18.7 0.0 2.8 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.1 gi|84490116|ref|YP_448348.1| - 0.00061 19.6 0.0 0.0014 18.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|84490116|ref|YP_448348.1| - 0.00065 19.1 0.3 0.0025 17.2 0.0 2.2 3 0 0 3 3 2 1 IstB-like ATP binding protein AAA_17 PF13207.1 gi|84490116|ref|YP_448348.1| - 0.0011 19.7 2.9 0.0028 18.4 0.2 3.2 2 2 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|84490116|ref|YP_448348.1| - 0.0034 16.8 0.0 0.011 15.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|84490116|ref|YP_448348.1| - 0.01 15.5 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA_18 PF13238.1 gi|84490116|ref|YP_448348.1| - 0.014 15.6 3.6 0.11 12.7 0.0 3.0 2 0 0 2 2 2 0 AAA domain Birna_VP4 PF01768.11 gi|84490116|ref|YP_448348.1| - 0.025 13.6 0.1 0.053 12.5 0.1 1.5 1 0 0 1 1 1 0 Birnavirus VP4 protein MobB PF03205.9 gi|84490116|ref|YP_448348.1| - 0.043 13.5 0.1 0.23 11.1 0.0 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.17 gi|84490116|ref|YP_448348.1| - 0.045 13.9 0.0 0.19 11.9 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_30 PF13604.1 gi|84490116|ref|YP_448348.1| - 0.063 12.8 0.0 0.15 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain SKI PF01202.17 gi|84490116|ref|YP_448348.1| - 0.075 12.8 4.3 0.74 9.6 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase Mg_chelatase PF01078.16 gi|84490116|ref|YP_448348.1| - 0.12 11.4 0.2 0.36 9.9 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.22 gi|84490116|ref|YP_448348.1| - 0.2 11.9 3.5 0.27 11.5 0.0 2.7 3 0 0 3 3 3 0 ABC transporter Inositol_P PF00459.20 gi|84490117|ref|YP_448349.1| - 1.7e-32 112.8 0.1 2e-32 112.5 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|84490117|ref|YP_448349.1| - 5.5e-08 32.0 0.4 1.1e-07 30.9 0.1 1.6 2 0 0 2 2 2 1 Fructose-1-6-bisphosphatase Sigma70_r4_2 PF08281.7 gi|84490117|ref|YP_448349.1| - 0.015 14.7 0.1 0.037 13.4 0.1 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 NAD_kinase PF01513.16 gi|84490118|ref|YP_448350.1| - 1.6e-61 207.6 0.2 2e-61 207.3 0.1 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|84490118|ref|YP_448350.1| - 0.00066 19.1 0.0 0.0012 18.2 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Mur_ligase_M PF08245.7 gi|84490119|ref|YP_448351.1| - 6.8e-10 39.3 1.0 1.2e-09 38.5 0.7 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Porphobil_deam PF01379.15 gi|84490120|ref|YP_448352.1| - 2.7e-68 229.0 0.1 3.8e-68 228.6 0.1 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|84490120|ref|YP_448352.1| - 3.6e-09 36.6 0.0 8e-09 35.4 0.0 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain GFO_IDH_MocA PF01408.17 gi|84490121|ref|YP_448353.1| - 2.2e-25 89.5 0.3 4e-25 88.6 0.2 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|84490121|ref|YP_448353.1| - 6e-11 42.1 0.0 1.3e-10 41.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain CoA_binding PF02629.14 gi|84490121|ref|YP_448353.1| - 0.003 18.0 0.8 0.003 18.0 0.6 2.3 2 1 1 3 3 3 1 CoA binding domain Semialdhyde_dh PF01118.19 gi|84490121|ref|YP_448353.1| - 0.0085 16.3 0.3 0.12 12.7 0.1 2.3 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|84490121|ref|YP_448353.1| - 0.0097 15.7 0.3 0.019 14.8 0.2 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|84490121|ref|YP_448353.1| - 0.055 13.8 0.1 0.17 12.3 0.0 1.9 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Pribosyltran PF00156.22 gi|84490122|ref|YP_448354.1| - 3e-22 78.6 1.0 5.1e-22 77.9 0.7 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|84490122|ref|YP_448354.1| - 1.9e-06 27.2 0.4 3.5e-06 26.3 0.2 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|84490122|ref|YP_448354.1| - 0.00025 20.3 0.8 0.00039 19.7 0.3 1.6 1 1 0 1 1 1 1 Phosphoribosyl transferase HTH_24 PF13412.1 gi|84490122|ref|YP_448354.1| - 0.0011 18.2 0.0 0.0053 16.1 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GerE PF00196.14 gi|84490122|ref|YP_448354.1| - 0.012 14.9 1.1 0.024 13.9 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_7 PF02796.10 gi|84490122|ref|YP_448354.1| - 0.021 14.6 0.1 0.037 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF2481 PF10654.4 gi|84490122|ref|YP_448354.1| - 0.023 14.3 0.0 0.052 13.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) HTH_23 PF13384.1 gi|84490122|ref|YP_448354.1| - 0.039 13.6 0.0 0.085 12.5 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.7 gi|84490122|ref|YP_448354.1| - 0.049 13.2 0.1 0.1 12.2 0.1 1.5 1 0 0 1 1 1 0 HTH domain Pex14_N PF04695.8 gi|84490122|ref|YP_448354.1| - 0.09 12.8 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region ADH_zinc_N PF00107.21 gi|84490122|ref|YP_448354.1| - 0.092 12.2 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase MarR_2 PF12802.2 gi|84490122|ref|YP_448354.1| - 0.14 11.8 0.0 0.38 10.4 0.0 1.7 1 0 0 1 1 1 0 MarR family eIF-1a PF01176.14 gi|84490123|ref|YP_448355.1| - 4.1e-26 90.1 1.2 5.4e-26 89.8 0.8 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 SBF PF01758.11 gi|84490124|ref|YP_448356.1| - 3.1e-19 69.0 12.3 3.1e-19 69.0 8.5 2.2 2 0 0 2 2 2 1 Sodium Bile acid symporter family DUF4137 PF13593.1 gi|84490124|ref|YP_448356.1| - 5.4e-14 52.0 20.4 7e-14 51.6 14.2 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF4495 PF14906.1 gi|84490124|ref|YP_448356.1| - 0.053 12.4 0.4 0.11 11.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4495) RIO1 PF01163.17 gi|84490125|ref|YP_448357.1| - 1.6e-56 190.7 0.2 1.6e-56 190.7 0.1 1.5 2 0 0 2 2 2 1 RIO1 family Pkinase PF00069.20 gi|84490125|ref|YP_448357.1| - 1e-05 24.8 0.0 2.4e-05 23.6 0.0 1.6 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|84490125|ref|YP_448357.1| - 0.00013 21.7 0.1 0.0057 16.4 0.1 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.9 gi|84490125|ref|YP_448357.1| - 0.0009 18.3 0.1 0.012 14.6 0.1 2.2 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Fructosamin_kin PF03881.9 gi|84490125|ref|YP_448357.1| - 0.051 12.5 0.1 0.64 8.9 0.0 2.0 1 1 1 2 2 2 0 Fructosamine kinase Pkinase_Tyr PF07714.12 gi|84490125|ref|YP_448357.1| - 0.13 11.3 0.0 0.32 10.0 0.0 1.7 2 0 0 2 2 2 0 Protein tyrosine kinase KH_1 PF00013.24 gi|84490126|ref|YP_448358.1| - 2.6e-12 46.1 8.3 1.3e-05 24.7 2.2 2.4 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|84490126|ref|YP_448358.1| - 0.004 16.7 4.9 0.32 10.7 0.2 2.6 2 0 0 2 2 2 2 KH domain DUF3295 PF11702.3 gi|84490126|ref|YP_448358.1| - 0.055 12.4 5.4 0.079 11.9 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) KH_2 PF07650.12 gi|84490126|ref|YP_448358.1| - 0.072 12.6 8.0 0.18 11.4 0.4 3.2 2 1 1 3 3 3 0 KH domain KH_4 PF13083.1 gi|84490126|ref|YP_448358.1| - 2 8.0 11.0 2.5 7.8 0.6 3.4 3 1 1 4 4 4 0 KH domain Topo-VIb_trans PF09239.6 gi|84490127|ref|YP_448359.1| - 3.4e-63 211.9 0.0 5.6e-63 211.2 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|84490127|ref|YP_448359.1| - 1.9e-12 46.8 0.1 3.8e-12 45.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|84490127|ref|YP_448359.1| - 7.6e-08 32.0 0.1 2.2e-07 30.6 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PBCV_basic_adap PF08789.5 gi|84490127|ref|YP_448359.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.5 1 0 0 1 1 1 0 PBCV-specific basic adaptor domain TP6A_N PF04406.9 gi|84490128|ref|YP_448360.1| - 3.1e-21 74.7 0.1 6e-21 73.8 0.0 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF3353 PF11833.3 gi|84490129|ref|YP_448361.1| - 0.26 10.7 9.1 0.31 10.4 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3353) DUF1212 PF06738.7 gi|84490129|ref|YP_448361.1| - 0.6 9.5 7.7 0.76 9.2 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) Voltage_CLC PF00654.15 gi|84490130|ref|YP_448362.1| - 0.015 14.3 7.7 0.0078 15.2 3.9 1.5 1 1 1 2 2 2 0 Voltage gated chloride channel DUF350 PF03994.9 gi|84490130|ref|YP_448362.1| - 0.049 13.3 0.6 0.049 13.3 0.4 3.1 2 1 0 3 3 3 0 Domain of Unknown Function (DUF350) TIM21 PF08294.6 gi|84490130|ref|YP_448362.1| - 0.088 12.4 0.2 0.088 12.4 0.1 2.4 3 0 0 3 3 3 0 TIM21 Cut8_M PF14483.1 gi|84490130|ref|YP_448362.1| - 0.16 11.8 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 Cut8 dimerisation domain RseC_MucC PF04246.7 gi|84490130|ref|YP_448362.1| - 0.21 11.1 4.8 7.1 6.2 0.0 2.4 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NfeD PF01957.13 gi|84490130|ref|YP_448362.1| - 4.8 7.3 7.0 0.55 10.3 0.4 2.0 1 1 1 2 2 2 0 NfeD-like C-terminal, partner-binding Glyco_trans_1_4 PF13692.1 gi|84490131|ref|YP_448363.1| - 6.4e-06 26.3 0.0 1.1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|84490131|ref|YP_448363.1| - 0.0001 21.8 0.1 0.00018 20.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 gi|84490131|ref|YP_448363.1| - 0.0014 17.4 0.0 0.002 16.9 0.0 1.3 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Fe-ADH PF00465.14 gi|84490131|ref|YP_448363.1| - 0.13 10.8 1.1 0.21 10.1 0.4 1.5 2 0 0 2 2 2 0 Iron-containing alcohol dehydrogenase Acyl_transf_3 PF01757.17 gi|84490132|ref|YP_448364.1| - 2.4e-28 98.9 42.0 3e-28 98.6 29.1 1.0 1 0 0 1 1 1 1 Acyltransferase family Herpes_pp38 PF04846.8 gi|84490133|ref|YP_448365.1| - 0.0018 17.5 0.7 0.0035 16.6 0.5 1.6 1 0 0 1 1 1 1 Herpesvirus pp38 phosphoprotein DUF1212 PF06738.7 gi|84490133|ref|YP_448365.1| - 0.016 14.6 8.4 0.028 13.9 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) Transgly_assoc PF04226.8 gi|84490133|ref|YP_448365.1| - 0.024 14.7 7.6 0.75 9.9 0.2 2.6 2 0 0 2 2 2 0 Transglycosylase associated protein Gly-zipper_Omp PF13488.1 gi|84490133|ref|YP_448365.1| - 0.038 13.6 2.7 1.4 8.6 0.2 2.3 2 0 0 2 2 2 0 Glycine zipper Yip1 PF04893.12 gi|84490133|ref|YP_448365.1| - 0.061 12.8 18.3 0.092 12.2 12.7 1.2 1 0 0 1 1 1 0 Yip1 domain Voltage_CLC PF00654.15 gi|84490133|ref|YP_448365.1| - 0.37 9.7 12.6 0.11 11.5 6.1 1.8 1 1 1 2 2 2 0 Voltage gated chloride channel LrgA PF03788.9 gi|84490133|ref|YP_448365.1| - 0.4 10.4 8.2 0.095 12.4 3.0 2.0 2 1 0 2 2 2 0 LrgA family ABC_membrane_2 PF06472.10 gi|84490133|ref|YP_448365.1| - 1.2 8.2 6.7 0.33 10.0 2.4 1.6 1 1 1 2 2 2 0 ABC transporter transmembrane region 2 SKG6 PF08693.5 gi|84490133|ref|YP_448365.1| - 4.1 6.8 7.6 0.17 11.1 0.5 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DUF3792 PF12670.2 gi|84490133|ref|YP_448365.1| - 8 6.3 18.7 5.3e+02 0.4 13.0 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3792) Gp_dh_C PF02800.15 gi|84490134|ref|YP_448366.1| - 5.9e-25 87.5 0.1 8.6e-25 87.0 0.1 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|84490134|ref|YP_448366.1| - 2.8e-21 76.0 0.2 7.3e-21 74.7 0.1 1.7 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|84490134|ref|YP_448366.1| - 6.2e-09 35.8 0.1 1.7e-08 34.4 0.1 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.11 gi|84490134|ref|YP_448366.1| - 4e-06 27.2 0.1 6.1e-05 23.3 0.0 2.4 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|84490134|ref|YP_448366.1| - 0.0003 19.9 0.3 0.0037 16.4 0.2 2.2 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.17 gi|84490134|ref|YP_448366.1| - 0.0055 17.2 0.0 0.02 15.3 0.0 2.0 1 1 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Semialdhyde_dh PF01118.19 gi|84490134|ref|YP_448366.1| - 0.0078 16.5 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|84490134|ref|YP_448366.1| - 0.0085 16.0 1.6 0.0089 16.0 0.1 1.8 2 0 0 2 2 2 1 TrkA-N domain Saccharop_dh PF03435.13 gi|84490134|ref|YP_448366.1| - 0.015 14.3 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase DUF3872 PF12988.2 gi|84490134|ref|YP_448366.1| - 0.026 14.0 0.0 0.042 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3872) F420_oxidored PF03807.12 gi|84490134|ref|YP_448366.1| - 0.082 13.3 0.3 0.26 11.7 0.1 2.0 2 1 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh_N PF04455.7 gi|84490135|ref|YP_448367.1| - 6.8e-34 116.0 0.4 1.5e-33 115.0 0.3 1.6 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region TPP_enzyme_M PF00205.17 gi|84490135|ref|YP_448367.1| - 0.032 13.9 0.2 0.15 11.8 0.1 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain PAH PF02671.16 gi|84490135|ref|YP_448367.1| - 0.11 12.1 0.0 0.24 11.0 0.0 1.6 1 0 0 1 1 1 0 Paired amphipathic helix repeat ApoA-II PF04711.8 gi|84490135|ref|YP_448367.1| - 0.13 12.1 0.1 3.3 7.6 0.0 2.4 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) Chlam_PMP PF02415.12 gi|84490136|ref|YP_448368.1| - 2.5e-08 33.6 77.2 0.0028 17.8 0.4 11.7 13 0 0 13 13 13 9 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Metallophos_2 PF12850.2 gi|84490137|ref|YP_448369.1| - 3.6e-08 33.3 0.1 5.8e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84490137|ref|YP_448369.1| - 1.8e-07 30.7 4.0 3.7e-07 29.7 2.8 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Aldo_ket_red PF00248.16 gi|162316920|ref|YP_448370.2| - 1.7e-42 145.1 0.0 2.5e-42 144.6 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|162316920|ref|YP_448370.2| - 1.1e-08 35.3 8.0 3.3e-08 33.7 5.5 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|162316920|ref|YP_448370.2| - 5.9e-08 32.8 9.7 1.7e-07 31.3 6.7 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|162316920|ref|YP_448370.2| - 1.8e-06 27.8 6.8 4.4e-06 26.6 4.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|162316920|ref|YP_448370.2| - 4.8e-05 23.7 4.5 0.024 15.0 0.2 2.8 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|162316920|ref|YP_448370.2| - 0.0081 15.9 16.0 0.05 13.4 2.6 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain HDNR PF15115.1 gi|162316920|ref|YP_448370.2| - 0.022 14.7 0.2 0.4 10.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function with conserved HDNR motif Fer2_2 PF01799.15 gi|162316920|ref|YP_448370.2| - 0.036 13.9 0.1 0.091 12.6 0.0 1.6 1 0 0 1 1 1 0 [2Fe-2S] binding domain Fer4_4 PF12800.2 gi|162316920|ref|YP_448370.2| - 0.098 13.0 15.5 0.16 12.3 2.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|162316920|ref|YP_448370.2| - 0.11 13.2 11.2 0.15 12.7 0.8 2.7 2 1 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|162316920|ref|YP_448370.2| - 0.76 10.1 15.0 0.73 10.2 2.4 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|162316920|ref|YP_448370.2| - 0.96 9.5 13.6 1.2 9.1 2.3 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.22 gi|162316920|ref|YP_448370.2| - 1.7 8.3 18.2 0.08 12.5 2.4 3.0 3 1 0 3 3 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|162316920|ref|YP_448370.2| - 7.8 6.1 10.8 1.8 8.2 0.3 3.0 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GyrI-like PF06445.10 gi|84490139|ref|YP_448371.1| - 2.8e-13 50.2 0.6 3.5e-13 49.8 0.4 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain eIF-5a PF01287.15 gi|84490140|ref|YP_448372.1| - 1e-17 63.7 1.5 1.7e-17 63.1 1.0 1.4 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP PF01132.15 gi|84490140|ref|YP_448372.1| - 0.021 14.4 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain GTP_EFTU_D2 PF03144.20 gi|84490140|ref|YP_448372.1| - 0.027 14.5 0.8 1 9.4 0.5 2.3 1 1 0 1 1 1 0 Elongation factor Tu domain 2 Tetraspannin PF00335.15 gi|84490141|ref|YP_448373.1| - 0.00018 20.8 0.2 0.0002 20.6 0.2 1.2 1 0 0 1 1 1 1 Tetraspanin family SpoIIIAH PF12685.2 gi|84490141|ref|YP_448373.1| - 0.00074 19.0 0.5 0.00076 19.0 0.3 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein DUF1510 PF07423.6 gi|84490141|ref|YP_448373.1| - 0.0033 16.8 0.0 0.0038 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) Shisa PF13908.1 gi|84490141|ref|YP_448373.1| - 0.0037 17.4 0.8 0.0047 17.1 0.6 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Pex14_N PF04695.8 gi|84490141|ref|YP_448373.1| - 0.011 15.7 2.8 0.014 15.4 1.9 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF2681 PF10883.3 gi|84490141|ref|YP_448373.1| - 0.028 14.6 0.0 0.045 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Cytochrom_C_asm PF01578.15 gi|84490141|ref|YP_448373.1| - 0.042 13.3 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF948 PF06103.6 gi|84490141|ref|YP_448373.1| - 0.044 13.6 0.0 0.06 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.6 gi|84490141|ref|YP_448373.1| - 0.045 11.2 2.7 0.054 11.0 1.8 1.0 1 0 0 1 1 1 0 Prominin MacB_PCD PF12704.2 gi|84490141|ref|YP_448373.1| - 0.056 13.0 1.1 0.061 12.8 0.8 1.1 1 0 0 1 1 1 0 MacB-like periplasmic core domain Ctr PF04145.10 gi|84490141|ref|YP_448373.1| - 0.068 13.2 0.0 0.076 13.0 0.0 1.2 1 0 0 1 1 1 0 Ctr copper transporter family SID-1_RNA_chan PF13965.1 gi|84490141|ref|YP_448373.1| - 0.069 11.3 0.1 0.077 11.1 0.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 COG4 PF08318.7 gi|84490141|ref|YP_448373.1| - 0.076 11.7 0.5 0.094 11.4 0.4 1.1 1 0 0 1 1 1 0 COG4 transport protein OSTbeta PF15048.1 gi|84490141|ref|YP_448373.1| - 0.096 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein YjgP_YjgQ PF03739.9 gi|84490141|ref|YP_448373.1| - 0.16 10.6 0.2 0.17 10.5 0.1 1.1 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family Sigma_reg_N PF13800.1 gi|84490141|ref|YP_448373.1| - 0.29 11.1 3.2 0.5 10.4 2.2 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF2500 PF10694.4 gi|84490141|ref|YP_448373.1| - 1.1 9.3 3.4 0.79 9.7 1.1 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2500) BioY PF02632.9 gi|84490142|ref|YP_448374.1| - 3.7e-37 127.2 18.8 3.7e-37 127.2 13.0 1.7 1 1 1 2 2 2 1 BioY family DUF3816 PF12822.2 gi|84490142|ref|YP_448374.1| - 0.0054 16.6 30.2 0.007 16.2 20.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3816) ECF-ribofla_trS PF07155.7 gi|84490142|ref|YP_448374.1| - 0.4 10.4 24.6 0.72 9.5 17.0 1.4 1 1 0 1 1 1 0 ECF-type riboflavin transporter, S component Phage_integrase PF00589.17 gi|84490143|ref|YP_448375.1| - 1e-44 152.2 2.6 1e-44 152.2 0.9 1.7 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|84490143|ref|YP_448375.1| - 2.4e-06 27.7 2.5 4.9e-06 26.7 0.7 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|84490143|ref|YP_448375.1| - 6.5e-05 23.0 2.0 0.0003 20.8 0.4 2.7 2 2 1 3 3 3 2 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.2 gi|84490143|ref|YP_448375.1| - 0.00024 20.8 0.5 0.00039 20.2 0.3 1.4 1 0 0 1 1 1 1 Integrase Caps_synth PF05704.7 gi|84490143|ref|YP_448375.1| - 0.2 10.7 10.0 0.17 11.0 3.7 2.2 2 0 0 2 2 2 0 Capsular polysaccharide synthesis protein Toprim_4 PF13662.1 gi|84490144|ref|YP_448376.1| - 1.2e-07 31.6 0.1 2.7e-07 30.5 0.1 1.6 1 0 0 1 1 1 1 Toprim domain AAA_11 PF13086.1 gi|84490144|ref|YP_448376.1| - 0.031 13.8 5.5 0.027 14.0 2.6 1.7 2 0 0 2 2 2 0 AAA domain Toprim PF01751.17 gi|84490144|ref|YP_448376.1| - 0.65 9.9 8.4 8.2 6.4 5.8 3.0 1 1 0 1 1 1 0 Toprim domain DDHD PF02862.12 gi|84490144|ref|YP_448376.1| - 1.8 8.3 13.9 45 3.7 10.7 2.2 1 1 1 2 2 2 0 DDHD domain DUF211 PF02680.9 gi|84490145|ref|YP_448377.1| - 2.4e-40 136.2 0.4 2.6e-40 136.0 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 Cyanate_lyase PF02560.9 gi|84490145|ref|YP_448377.1| - 0.077 12.5 0.1 1.5 8.4 0.0 2.2 1 1 1 2 2 2 0 Cyanate lyase C-terminal domain HMA PF00403.21 gi|84490145|ref|YP_448377.1| - 0.087 12.9 0.4 0.16 12.1 0.2 1.6 2 0 0 2 2 2 0 Heavy-metal-associated domain Methyltransf_6 PF03737.10 gi|84490146|ref|YP_448378.1| - 2.5e-21 76.1 1.1 3.2e-21 75.8 0.8 1.1 1 0 0 1 1 1 1 Demethylmenaquinone methyltransferase Gar1 PF04410.9 gi|84490147|ref|YP_448379.1| - 6.6e-16 58.1 0.2 7.6e-16 57.9 0.1 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region GCV_T_C PF08669.6 gi|84490147|ref|YP_448379.1| - 0.09 12.8 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain TFIIB PF00382.14 gi|84490148|ref|YP_448380.1| - 2.3e-45 152.2 0.5 2e-22 78.7 0.1 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|84490148|ref|YP_448380.1| - 2.1e-20 71.7 1.4 2.1e-20 71.7 1.0 2.1 3 0 0 3 3 3 1 TFIIB zinc-binding Ribosomal_S27e PF01667.12 gi|84490148|ref|YP_448380.1| - 0.00037 19.9 0.5 0.00071 19.0 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S27 Sigma70_r4 PF04545.11 gi|84490148|ref|YP_448380.1| - 0.0011 18.2 0.1 0.083 12.2 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 A2L_zn_ribbon PF08792.5 gi|84490148|ref|YP_448380.1| - 0.0057 16.0 0.9 0.0057 16.0 0.6 1.8 2 0 0 2 2 2 1 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84490148|ref|YP_448380.1| - 0.008 15.8 0.5 0.02 14.5 0.4 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Lar_restr_allev PF14354.1 gi|84490148|ref|YP_448380.1| - 0.028 14.7 1.1 0.27 11.5 0.3 2.3 2 0 0 2 2 2 0 Restriction alleviation protein Lar HTH_AsnC-type PF13404.1 gi|84490148|ref|YP_448380.1| - 0.07 12.6 0.1 0.32 10.5 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.2 gi|84490148|ref|YP_448380.1| - 0.11 12.3 1.6 0.23 11.3 0.2 2.0 2 0 0 2 2 2 0 Double zinc ribbon Cyclin_C PF02984.14 gi|84490148|ref|YP_448380.1| - 0.12 12.3 0.0 1.4 8.8 0.0 2.1 1 1 1 2 2 2 0 Cyclin, C-terminal domain DUF3797 PF12677.2 gi|84490148|ref|YP_448380.1| - 0.12 11.9 2.4 3.9 7.1 1.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) LacI PF00356.16 gi|84490148|ref|YP_448380.1| - 0.13 11.8 0.9 16 5.2 0.1 2.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HypA PF01155.14 gi|84490148|ref|YP_448380.1| - 0.16 11.6 0.9 1.8 8.2 0.4 2.3 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family HTH_23 PF13384.1 gi|84490148|ref|YP_448380.1| - 0.21 11.2 0.1 0.21 11.2 0.0 2.4 3 1 0 3 3 3 0 Homeodomain-like domain Auto_anti-p27 PF06677.7 gi|84490148|ref|YP_448380.1| - 0.34 10.6 3.7 1.4 8.7 1.1 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ribbon_3 PF13248.1 gi|84490148|ref|YP_448380.1| - 0.84 8.9 8.5 0.044 12.9 2.0 1.8 2 1 0 2 2 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|84490148|ref|YP_448380.1| - 4.7 7.2 8.4 0.26 11.2 0.6 2.5 2 1 1 3 3 3 0 Zinc ribbon domain DUF2116 PF09889.4 gi|84490149|ref|YP_448381.1| - 6.1e-29 99.6 3.7 6.7e-29 99.4 2.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) MtrG PF04210.8 gi|84490149|ref|YP_448381.1| - 0.0038 16.8 0.1 0.0044 16.6 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G PDR_CDR PF06422.7 gi|84490149|ref|YP_448381.1| - 0.0052 16.4 0.5 0.0062 16.1 0.4 1.2 1 1 0 1 1 1 1 CDR ABC transporter T2SF PF00482.18 gi|84490149|ref|YP_448381.1| - 0.0061 16.4 0.0 0.0067 16.3 0.0 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F DUF329 PF03884.9 gi|84490149|ref|YP_448381.1| - 0.0067 15.9 2.9 0.0091 15.5 1.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF329) Ecl1 PF12855.2 gi|84490149|ref|YP_448381.1| - 0.019 14.2 1.2 0.027 13.7 0.8 1.3 1 0 0 1 1 1 0 Life-span regulatory factor DUF3753 PF12575.3 gi|84490149|ref|YP_448381.1| - 0.02 14.6 0.2 0.026 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3753) DUF2093 PF09866.4 gi|84490149|ref|YP_448381.1| - 0.023 13.8 0.5 0.037 13.1 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) FYVE PF01363.16 gi|84490149|ref|YP_448381.1| - 0.025 14.4 0.9 0.03 14.2 0.6 1.1 1 0 0 1 1 1 0 FYVE zinc finger zinc_ribbon_2 PF13240.1 gi|84490149|ref|YP_448381.1| - 0.049 13.1 0.7 0.049 13.1 0.5 1.9 2 0 0 2 2 2 0 zinc-ribbon domain zf-MYND PF01753.13 gi|84490149|ref|YP_448381.1| - 0.055 13.3 2.5 0.083 12.7 1.7 1.3 1 0 0 1 1 1 0 MYND finger zf-ribbon_3 PF13248.1 gi|84490149|ref|YP_448381.1| - 0.081 12.1 0.3 0.12 11.6 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DRP PF06044.7 gi|84490149|ref|YP_448381.1| - 0.082 11.8 0.1 0.092 11.7 0.1 1.1 1 0 0 1 1 1 0 Dam-replacing family DZR PF12773.2 gi|84490149|ref|YP_448381.1| - 0.089 12.6 1.9 0.27 11.0 1.3 1.3 1 1 1 2 2 2 0 Double zinc ribbon Synaptobrevin PF00957.16 gi|84490149|ref|YP_448381.1| - 0.12 12.0 0.3 0.14 11.7 0.2 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF3595 PF12166.3 gi|84490149|ref|YP_448381.1| - 0.15 10.7 0.4 0.18 10.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3595) UPF0547 PF10571.4 gi|84490149|ref|YP_448381.1| - 0.25 11.0 2.6 0.46 10.2 1.8 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 RPAP2_Rtr1 PF04181.8 gi|84490149|ref|YP_448381.1| - 0.34 11.0 2.8 0.47 10.5 1.9 1.4 1 1 0 1 1 1 0 Rtr1/RPAP2 family DUF2256 PF10013.4 gi|84490149|ref|YP_448381.1| - 0.48 10.2 4.4 10 5.9 0.6 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-dskA_traR PF01258.12 gi|84490149|ref|YP_448381.1| - 0.52 10.0 4.3 1.9 8.3 3.0 1.9 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger zf-FCS PF06467.9 gi|84490149|ref|YP_448381.1| - 0.57 9.8 3.3 4 7.1 2.3 2.1 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif zf-DHHC PF01529.15 gi|84490149|ref|YP_448381.1| - 7.3 5.9 6.5 1.2e+02 1.9 4.5 2.0 1 1 0 1 1 1 0 DHHC palmitoyltransferase AA_kinase PF00696.23 gi|84490150|ref|YP_448382.1| - 1.1e-31 110.2 1.6 1.4e-31 109.9 1.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family eRF1_2 PF03464.10 gi|84490151|ref|YP_448383.1| - 8.7e-40 136.1 0.0 2e-39 134.9 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|84490151|ref|YP_448383.1| - 8.7e-33 112.9 0.7 2.3e-32 111.5 0.3 1.9 2 0 0 2 2 1 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|84490151|ref|YP_448383.1| - 3.7e-25 88.0 0.0 9.2e-25 86.7 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 1 DUF4109 PF13397.1 gi|84490151|ref|YP_448383.1| - 0.0041 17.4 0.3 0.011 16.1 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4109) Zn-ribbon_8 PF09723.5 gi|84490151|ref|YP_448383.1| - 0.0061 16.4 2.0 0.0061 16.4 1.4 2.4 2 0 0 2 2 2 1 Zinc ribbon domain Ogr_Delta PF04606.7 gi|84490151|ref|YP_448383.1| - 0.011 15.4 2.8 0.068 12.8 0.1 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Lar_restr_allev PF14354.1 gi|84490151|ref|YP_448383.1| - 0.018 15.3 1.1 0.042 14.1 0.7 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF2387 PF09526.5 gi|84490151|ref|YP_448383.1| - 0.2 11.5 9.2 0.038 13.9 3.7 1.8 2 0 0 2 2 1 0 Probable metal-binding protein (DUF2387) Mut7-C PF01927.11 gi|84490151|ref|YP_448383.1| - 0.52 10.2 3.8 1.6 8.6 1.2 2.3 1 1 2 3 3 3 0 Mut7-C RNAse domain zf-ribbon_3 PF13248.1 gi|84490151|ref|YP_448383.1| - 0.57 9.4 4.8 2.9 7.2 3.4 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|84490151|ref|YP_448383.1| - 0.71 9.1 4.6 1.9 7.7 0.3 2.2 1 1 1 2 2 2 0 Transcription factor zinc-finger zinc_ribbon_4 PF13717.1 gi|84490151|ref|YP_448383.1| - 0.87 9.3 4.9 3.6 7.3 3.2 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|84490151|ref|YP_448383.1| - 2.4 7.8 7.6 1.1 8.8 3.1 2.1 2 1 0 2 2 2 0 zinc-ribbon domain zf-HIT PF04438.11 gi|84490151|ref|YP_448383.1| - 3.3 7.4 7.0 3.3 7.4 0.6 2.3 2 0 0 2 2 2 0 HIT zinc finger Ribosomal_S10 PF00338.17 gi|84490152|ref|YP_448384.1| - 3.6e-29 100.4 0.0 3.9e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e ACT_5 PF13710.1 gi|84490152|ref|YP_448384.1| - 0.085 12.6 0.1 0.26 11.1 0.0 1.8 2 1 1 3 3 3 0 ACT domain GTP_EFTU PF00009.22 gi|84490153|ref|YP_448385.1| - 2.7e-60 203.0 0.0 3.4e-60 202.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|84490153|ref|YP_448385.1| - 3.2e-30 104.2 0.4 1.3e-29 102.3 0.0 2.1 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|84490153|ref|YP_448385.1| - 7.3e-16 58.0 1.4 1.5e-15 57.0 1.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|84490153|ref|YP_448385.1| - 7.2e-09 35.6 0.1 2.2e-07 30.8 0.0 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|84490153|ref|YP_448385.1| - 0.00023 20.5 0.5 0.0059 15.9 0.2 2.9 2 1 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU_D4 PF14578.1 gi|84490153|ref|YP_448385.1| - 0.00062 19.3 0.4 0.0018 17.8 0.3 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Miro PF08477.8 gi|84490153|ref|YP_448385.1| - 0.0025 18.2 0.0 0.029 14.8 0.0 2.4 2 1 0 2 2 2 1 Miro-like protein Septin PF00735.13 gi|84490153|ref|YP_448385.1| - 0.018 14.0 0.0 0.03 13.3 0.0 1.3 1 0 0 1 1 1 0 Septin Gtr1_RagA PF04670.7 gi|84490153|ref|YP_448385.1| - 0.031 13.4 0.0 1.2 8.2 0.0 2.1 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region Dynamin_N PF00350.18 gi|84490153|ref|YP_448385.1| - 0.053 13.3 0.1 5.6 6.7 0.0 2.4 1 1 1 2 2 2 0 Dynamin family ATP_bind_1 PF03029.12 gi|84490153|ref|YP_448385.1| - 0.11 12.0 0.2 0.45 10.0 0.0 1.9 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.22 gi|84490154|ref|YP_448386.1| - 4.1e-62 208.9 0.7 7e-62 208.2 0.5 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|84490154|ref|YP_448386.1| - 9.3e-27 92.9 0.1 4.5e-26 90.7 0.0 2.3 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.1 gi|84490154|ref|YP_448386.1| - 1.3e-23 82.6 0.3 2.9e-23 81.4 0.2 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.19 gi|84490154|ref|YP_448386.1| - 1.4e-22 79.3 0.4 4.4e-22 77.7 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.20 gi|84490154|ref|YP_448386.1| - 3.8e-10 39.7 2.2 8.7e-10 38.5 0.8 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|84490154|ref|YP_448386.1| - 0.00044 20.1 0.0 0.0011 18.8 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ribosomal_S7 PF00177.16 gi|84490155|ref|YP_448387.1| - 8.6e-44 148.6 5.0 9.9e-44 148.5 3.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.20 gi|84490156|ref|YP_448388.1| - 5.2e-39 132.4 0.1 5.8e-39 132.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.12 gi|84490157|ref|YP_448389.1| - 2.5e-19 68.6 4.5 6.7e-16 57.6 0.4 2.2 1 1 1 2 2 2 2 KH domain KH_5 PF13184.1 gi|84490157|ref|YP_448389.1| - 2.5e-12 46.3 1.2 1.1e-11 44.2 0.1 2.1 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 gi|84490157|ref|YP_448389.1| - 5e-07 29.2 4.1 0.002 17.7 0.5 2.6 2 1 0 2 2 2 2 KH domain KH_4 PF13083.1 gi|84490157|ref|YP_448389.1| - 5.2e-07 29.2 2.0 0.00013 21.5 0.1 2.3 1 1 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|84490157|ref|YP_448389.1| - 0.011 15.4 5.0 1.2 8.8 0.1 3.1 3 0 0 3 3 3 0 KH domain DUF2674 PF10879.3 gi|84490157|ref|YP_448389.1| - 0.068 12.9 0.2 1.5 8.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2674) Ribosomal_L7Ae PF01248.21 gi|84490158|ref|YP_448390.1| - 1.7e-20 72.3 0.0 1.8e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.12 gi|84490159|ref|YP_448391.1| - 2.3e-52 177.9 5.6 1.8e-51 175.0 3.9 2.0 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.7 gi|84490160|ref|YP_448392.1| - 1.2e-90 304.1 1.6 4.7e-88 295.6 0.3 2.7 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|84490160|ref|YP_448392.1| - 2.5e-68 229.2 0.1 5.4e-68 228.1 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_5 PF04998.12 gi|84490160|ref|YP_448392.1| - 3.1e-32 111.9 0.1 8e-32 110.5 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.12 gi|84490160|ref|YP_448392.1| - 6.4e-31 106.3 0.0 1.5e-30 105.1 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.13 gi|84490160|ref|YP_448392.1| - 3.8e-30 104.6 0.0 1.3e-29 102.9 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 USP7_ICP0_bdg PF12436.3 gi|84490160|ref|YP_448392.1| - 0.12 11.6 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 RNA_pol_Rpb2_6 PF00562.23 gi|84490161|ref|YP_448393.1| - 2.2e-127 425.0 0.0 2.6e-127 424.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.15 gi|84490161|ref|YP_448393.1| - 7.5e-28 96.6 0.0 1.5e-27 95.6 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.8 gi|84490161|ref|YP_448393.1| - 6.1e-23 80.4 0.1 1.4e-22 79.2 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|84490161|ref|YP_448393.1| - 1.6e-15 56.7 3.4 3.3e-15 55.7 2.4 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_45 PF10385.4 gi|84490161|ref|YP_448393.1| - 0.096 12.5 2.0 0.45 10.3 0.4 2.7 3 0 0 3 3 3 0 RNA polymerase beta subunit external 1 domain RNA_pol_Rpb2_1 PF04563.10 gi|84490162|ref|YP_448394.1| - 7e-59 198.1 0.0 8.3e-59 197.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.9 gi|84490162|ref|YP_448394.1| - 5.3e-25 87.9 0.4 8.6e-25 87.2 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.11 gi|84490162|ref|YP_448394.1| - 4e-24 84.1 0.0 7.5e-24 83.2 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb5_C PF01191.14 gi|84490163|ref|YP_448395.1| - 1.2e-29 101.7 0.3 1.3e-29 101.6 0.2 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain Enkurin PF13864.1 gi|84490163|ref|YP_448395.1| - 0.069 13.3 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 Calmodulin-binding DUF2103 PF09876.4 gi|84490163|ref|YP_448395.1| - 0.08 12.7 0.0 0.094 12.4 0.0 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2103) DUF4283 PF14111.1 gi|84490163|ref|YP_448395.1| - 0.098 11.7 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) PGK PF00162.14 gi|84490164|ref|YP_448396.1| - 8.1e-120 399.8 0.0 9.2e-120 399.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase TIM PF00121.13 gi|84490165|ref|YP_448397.1| - 5.6e-31 107.4 0.5 7.5e-19 67.7 0.0 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase NMO PF03060.10 gi|84490165|ref|YP_448397.1| - 1.4e-05 24.3 0.1 2.5e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.9 gi|84490165|ref|YP_448397.1| - 0.00011 21.3 0.8 0.00041 19.5 0.2 1.9 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.13 gi|84490165|ref|YP_448397.1| - 0.00026 19.9 0.0 0.0004 19.3 0.0 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|84490165|ref|YP_448397.1| - 0.00054 19.2 1.0 0.0013 18.0 0.1 2.0 3 0 0 3 3 3 1 Histidine biosynthesis protein Glu_synthase PF01645.12 gi|84490165|ref|YP_448397.1| - 0.0023 16.9 0.0 0.0037 16.2 0.0 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase IGPS PF00218.16 gi|84490165|ref|YP_448397.1| - 0.01 14.9 0.1 0.019 14.0 0.1 1.4 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase PcrB PF01884.12 gi|84490165|ref|YP_448397.1| - 0.029 13.6 0.2 0.059 12.6 0.2 1.5 1 0 0 1 1 1 0 PcrB family Hydrolase_like PF13242.1 gi|84490165|ref|YP_448397.1| - 0.12 12.0 0.0 0.4 10.4 0.0 1.8 2 0 0 2 2 2 0 HAD-hyrolase-like Wyosine_form PF08608.7 gi|84490166|ref|YP_448398.1| - 2.6e-20 72.2 0.0 8e-20 70.7 0.0 1.9 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.16 gi|84490166|ref|YP_448398.1| - 1.5e-17 64.2 1.4 9.7e-17 61.6 0.9 2.1 1 1 0 1 1 1 1 Radical SAM superfamily PC-Esterase PF13839.1 gi|84490166|ref|YP_448398.1| - 0.0012 18.7 0.0 0.002 17.9 0.0 1.4 1 0 0 1 1 1 1 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Fer4_14 PF13394.1 gi|84490166|ref|YP_448398.1| - 0.0016 18.4 5.7 0.013 15.5 3.9 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|84490166|ref|YP_448398.1| - 0.0086 16.2 7.8 0.018 15.1 3.6 2.6 2 1 0 2 2 2 1 4Fe-4S single cluster domain HAD_2 PF13419.1 gi|84490166|ref|YP_448398.1| - 0.08 13.1 0.0 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF1002 PF06207.6 gi|84490167|ref|YP_448399.1| - 1e-57 195.0 32.1 1.3e-57 194.6 22.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1002) SHS2_FTSA PF02491.15 gi|84490167|ref|YP_448399.1| - 1.2 9.0 8.1 1.4 8.8 1.3 3.3 2 1 1 3 3 3 0 SHS2 domain inserted in FTSA DUF3708 PF12501.3 gi|84490167|ref|YP_448399.1| - 5.6 6.7 5.0 14 5.4 2.0 2.4 1 1 1 2 2 2 0 Phosphate ATP-binding cassette transporter Fer4 PF00037.22 gi|84490168|ref|YP_448400.1| - 4.8e-09 35.4 9.2 7.4e-05 22.1 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84490168|ref|YP_448400.1| - 5.9e-09 35.6 4.6 5.6e-05 22.9 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|84490168|ref|YP_448400.1| - 6.2e-08 32.9 10.6 1.4e-07 31.7 7.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84490168|ref|YP_448400.1| - 3.2e-07 30.0 22.4 1.8e-05 24.4 9.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490168|ref|YP_448400.1| - 3.4e-07 29.8 10.0 0.0019 17.9 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84490168|ref|YP_448400.1| - 6.1e-07 29.3 4.4 0.0031 17.4 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84490168|ref|YP_448400.1| - 7.6e-07 29.2 10.7 2.3e-06 27.7 7.4 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Flavodoxin_5 PF12724.2 gi|84490168|ref|YP_448400.1| - 2.3e-06 27.6 0.3 4.4e-06 26.7 0.2 1.5 1 1 0 1 1 1 1 Flavodoxin domain Fer4_16 PF13484.1 gi|84490168|ref|YP_448400.1| - 2.2e-05 25.0 14.8 0.00015 22.4 2.2 3.1 3 1 1 4 4 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84490168|ref|YP_448400.1| - 2.3e-05 24.0 10.3 0.0052 16.6 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84490168|ref|YP_448400.1| - 7.1e-05 23.0 6.8 0.0079 16.5 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Flavodoxin_1 PF00258.20 gi|84490168|ref|YP_448400.1| - 8.1e-05 22.6 0.1 0.00012 22.1 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|84490168|ref|YP_448400.1| - 0.00045 19.6 2.0 0.0011 18.4 1.4 1.8 1 1 0 1 1 1 1 Flavodoxin domain Fer4_18 PF13746.1 gi|84490168|ref|YP_448400.1| - 0.00082 19.7 13.7 0.01 16.2 2.3 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490168|ref|YP_448400.1| - 0.0043 17.5 15.7 0.26 11.9 2.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_4 PF12682.2 gi|84490168|ref|YP_448400.1| - 0.0054 16.0 1.7 0.018 14.3 0.1 2.4 2 1 1 3 3 3 1 Flavodoxin Fer4_4 PF12800.2 gi|84490168|ref|YP_448400.1| - 0.0071 16.5 14.9 0.092 13.1 3.5 2.3 1 1 1 2 2 2 2 4Fe-4S binding domain Flavodoxin_NdrI PF07972.6 gi|84490168|ref|YP_448400.1| - 0.046 13.6 5.0 0.079 12.8 0.2 3.1 3 2 1 4 4 4 0 NrdI Flavodoxin like DUF1649 PF07855.7 gi|84490168|ref|YP_448400.1| - 0.055 13.1 3.4 0.65 9.6 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1649) Fer4_15 PF13459.1 gi|84490168|ref|YP_448400.1| - 0.15 12.6 7.0 6.2 7.4 1.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|84490168|ref|YP_448400.1| - 0.58 10.0 9.5 0.64 9.9 5.1 2.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84490168|ref|YP_448400.1| - 2.1 8.7 8.8 13 6.2 0.2 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain ATP-grasp_2 PF08442.5 gi|84490169|ref|YP_448401.1| - 1.8e-62 210.3 1.7 3e-62 209.5 1.2 1.4 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.14 gi|84490169|ref|YP_448401.1| - 6.3e-16 58.3 1.9 1e-15 57.6 0.2 1.9 2 0 0 2 2 2 1 CoA-ligase ATP-grasp_5 PF13549.1 gi|84490169|ref|YP_448401.1| - 6.4e-12 45.1 0.2 1.4e-11 44.0 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|84490169|ref|YP_448401.1| - 7.1e-06 25.7 0.3 1.5e-05 24.6 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-synt_F PF01990.12 gi|84490169|ref|YP_448401.1| - 4.4e-05 23.7 0.9 0.41 11.0 0.0 2.7 2 1 0 2 2 2 2 ATP synthase (F/14-kDa) subunit CPSase_L_D2 PF02786.12 gi|84490169|ref|YP_448401.1| - 9e-05 21.8 0.6 0.00071 18.9 0.1 2.1 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 gi|84490169|ref|YP_448401.1| - 0.00084 19.1 0.1 0.0017 18.1 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|84490169|ref|YP_448401.1| - 0.0052 16.1 0.6 0.01 15.1 0.1 1.8 2 0 0 2 2 2 1 ATP-grasp domain POR PF01558.13 gi|84490170|ref|YP_448402.1| - 1.3e-32 113.1 0.3 1.5e-32 112.9 0.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase DUF1103 PF06513.6 gi|84490170|ref|YP_448402.1| - 0.022 14.1 1.4 0.029 13.7 1.0 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) TPP_enzyme_C PF02775.16 gi|84490171|ref|YP_448403.1| - 1.3e-38 131.9 0.4 1.8e-38 131.5 0.3 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|84490172|ref|YP_448404.1| - 2.3e-77 259.5 0.7 2.9e-77 259.2 0.5 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|84490172|ref|YP_448404.1| - 1.1e-06 28.3 0.1 1.8e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.15 gi|84490172|ref|YP_448404.1| - 7.7e-05 22.6 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain IF-2B PF01008.12 gi|84490172|ref|YP_448404.1| - 0.023 13.7 0.0 0.036 13.0 0.0 1.3 1 0 0 1 1 1 0 Initiation factor 2 subunit family Arg_tRNA_synt_N PF03485.11 gi|84490172|ref|YP_448404.1| - 0.087 13.3 0.0 0.54 10.8 0.0 2.3 2 0 0 2 2 2 0 Arginyl tRNA synthetase N terminal domain Fer4 PF00037.22 gi|84490173|ref|YP_448405.1| - 3.1e-14 51.8 14.2 1.1e-07 31.0 2.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84490173|ref|YP_448405.1| - 1.3e-11 44.6 7.3 1.7e-11 44.3 5.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84490173|ref|YP_448405.1| - 1.7e-10 40.1 12.4 1.6e-05 24.5 1.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84490173|ref|YP_448405.1| - 6.8e-10 38.3 14.3 6.9e-07 28.8 1.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84490173|ref|YP_448405.1| - 1e-09 38.0 9.5 7.7e-05 22.4 2.0 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490173|ref|YP_448405.1| - 1.4e-09 37.6 9.3 5.4e-05 22.9 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84490173|ref|YP_448405.1| - 3.1e-07 30.5 10.8 8e-07 29.2 7.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84490173|ref|YP_448405.1| - 4.2e-07 30.6 8.2 0.0015 19.2 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|84490173|ref|YP_448405.1| - 1.2e-06 28.9 7.5 0.0015 19.0 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|84490173|ref|YP_448405.1| - 2.8e-06 27.1 12.7 0.0024 18.0 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84490173|ref|YP_448405.1| - 6.7e-06 26.0 7.7 0.007 16.3 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|84490173|ref|YP_448405.1| - 1.6e-05 25.1 9.4 0.0037 17.6 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|84490173|ref|YP_448405.1| - 1.9e-05 25.0 8.9 0.019 15.3 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84490173|ref|YP_448405.1| - 0.00077 19.7 11.5 0.078 13.3 8.0 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490173|ref|YP_448405.1| - 0.0017 18.7 16.2 0.022 15.3 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|84490173|ref|YP_448405.1| - 0.053 13.4 4.5 0.14 12.0 3.1 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain HAUS5 PF14817.1 gi|84490174|ref|YP_448406.1| - 0.0016 17.0 21.5 0.002 16.7 14.9 1.2 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 5 HALZ PF02183.13 gi|84490174|ref|YP_448406.1| - 0.0035 17.0 0.5 0.0035 17.0 0.4 4.3 4 1 0 5 5 5 1 Homeobox associated leucine zipper IncA PF04156.9 gi|84490174|ref|YP_448406.1| - 0.01 15.4 14.5 0.01 15.4 10.0 2.5 1 1 1 2 2 2 1 IncA protein DivIC PF04977.10 gi|84490174|ref|YP_448406.1| - 0.016 14.6 2.4 0.016 14.6 1.6 4.6 2 1 0 4 4 4 0 Septum formation initiator Striatin PF08232.7 gi|84490174|ref|YP_448406.1| - 0.043 14.1 28.3 0.04 14.2 10.5 3.0 1 1 1 2 2 2 0 Striatin family Laminin_N PF00055.12 gi|84490174|ref|YP_448406.1| - 0.045 12.7 7.4 0.46 9.4 0.4 2.3 1 1 1 2 2 2 0 Laminin N-terminal (Domain VI) AAA_13 PF13166.1 gi|84490174|ref|YP_448406.1| - 0.38 9.1 40.1 0.47 8.8 27.8 1.1 1 0 0 1 1 1 0 AAA domain DUF812 PF05667.6 gi|84490174|ref|YP_448406.1| - 0.4 9.1 33.8 0.46 8.9 23.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF4140 PF13600.1 gi|84490174|ref|YP_448406.1| - 0.5 10.8 13.7 3.8 8.0 0.8 3.5 2 1 2 4 4 4 0 N-terminal domain of unknown function (DUF4140) Fzo_mitofusin PF04799.8 gi|84490174|ref|YP_448406.1| - 0.96 8.8 29.0 0.093 12.1 2.4 3.3 1 1 1 3 3 3 0 fzo-like conserved region APG6 PF04111.7 gi|84490174|ref|YP_448406.1| - 1.6 7.6 39.3 2.3 7.2 17.3 2.1 1 1 1 2 2 2 0 Autophagy protein Apg6 Reo_sigmaC PF04582.7 gi|84490174|ref|YP_448406.1| - 2.3 7.3 10.9 1.7 7.7 5.8 1.7 1 1 0 1 1 1 0 Reovirus sigma C capsid protein CENP-F_leu_zip PF10473.4 gi|84490174|ref|YP_448406.1| - 2.8 7.8 38.0 0.11 12.3 15.4 2.5 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1319 PF07028.6 gi|84490174|ref|YP_448406.1| - 3.5 7.8 31.5 1.1 9.4 1.7 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1319) ATG16 PF08614.6 gi|84490174|ref|YP_448406.1| - 4 7.2 38.3 0.9 9.3 16.4 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF904 PF06005.7 gi|84490174|ref|YP_448406.1| - 6.1 7.2 46.5 0.076 13.3 5.2 4.2 1 1 2 3 3 3 0 Protein of unknown function (DUF904) TMCO5 PF14992.1 gi|84490174|ref|YP_448406.1| - 6.2 5.8 36.1 21 4.1 25.0 1.6 1 1 1 2 2 2 0 TMCO5 family Nup54 PF13874.1 gi|84490174|ref|YP_448406.1| - 6.2 6.4 26.9 0.7 9.5 8.8 2.6 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Rootletin PF15035.1 gi|84490174|ref|YP_448406.1| - 6.3 6.7 34.4 54 3.6 10.6 3.2 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF372 PF04036.7 gi|84490175|ref|YP_448407.1| - 1.1e-23 82.3 0.1 1.9e-23 81.6 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF372) DUF381 PF04038.7 gi|84490175|ref|YP_448407.1| - 2.5e-23 81.8 0.8 3.3e-23 81.4 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF381) HMA PF00403.21 gi|84490175|ref|YP_448407.1| - 0.083 13.0 0.1 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Heavy-metal-associated domain DUF515 PF04415.7 gi|84490176|ref|YP_448408.1| - 2.4e-38 131.4 26.7 4.1e-25 87.9 10.3 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF515) DUF912 PF06024.7 gi|84490176|ref|YP_448408.1| - 0.011 15.8 0.8 0.011 15.8 0.5 2.7 2 1 1 3 3 3 0 Nucleopolyhedrovirus protein of unknown function (DUF912) Med2 PF11214.3 gi|84490176|ref|YP_448408.1| - 0.16 12.0 3.4 0.29 11.1 0.6 2.5 2 1 0 2 2 2 0 Mediator complex subunit 2 Fasciclin PF02469.17 gi|84490176|ref|YP_448408.1| - 3.5 7.6 9.6 0.97 9.4 3.9 2.2 2 1 0 2 2 2 0 Fasciclin domain Synaptobrevin PF00957.16 gi|84490176|ref|YP_448408.1| - 5.7 6.6 11.2 20 4.8 0.0 3.8 4 0 0 4 4 4 0 Synaptobrevin CDP-OH_P_transf PF01066.16 gi|84490177|ref|YP_448409.1| - 1.7e-11 44.3 3.6 1.7e-11 44.3 2.5 2.6 1 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF3488 PF11992.3 gi|84490177|ref|YP_448409.1| - 0.027 13.0 8.7 0.046 12.3 6.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) IncA PF04156.9 gi|84490177|ref|YP_448409.1| - 0.17 11.4 0.0 0.17 11.4 0.0 3.5 3 1 0 3 3 3 0 IncA protein RNase_HII PF01351.13 gi|84490178|ref|YP_448410.1| - 4.4e-48 163.5 1.7 5e-48 163.3 1.2 1.0 1 0 0 1 1 1 1 Ribonuclease HII Actin PF00022.14 gi|84490178|ref|YP_448410.1| - 0.024 13.0 0.5 0.15 10.4 0.0 1.9 1 1 1 2 2 2 0 Actin ThiF PF00899.16 gi|84490178|ref|YP_448410.1| - 4.8 6.9 5.6 14 5.4 0.8 2.2 1 1 1 2 2 2 0 ThiF family MotA_ExbB PF01618.11 gi|84490179|ref|YP_448411.1| - 7.3e-31 106.6 1.6 7.3e-31 106.6 1.1 1.7 2 0 0 2 2 2 1 MotA/TolQ/ExbB proton channel family DUF830 PF05708.7 gi|84490179|ref|YP_448411.1| - 0.12 12.4 0.4 0.4 10.6 0.1 1.8 2 0 0 2 2 2 0 Orthopoxvirus protein of unknown function (DUF830) Ribosomal_S8 PF00410.14 gi|84490179|ref|YP_448411.1| - 2.2 8.1 6.0 0.41 10.4 0.6 2.3 3 0 0 3 3 3 0 Ribosomal protein S8 PrgI PF12666.2 gi|84490179|ref|YP_448411.1| - 2.7 8.2 5.9 0.88 9.7 1.2 2.1 2 0 0 2 2 2 0 PrgI family protein ExbD PF02472.11 gi|84490180|ref|YP_448412.1| - 1.1e-05 25.4 1.0 1.9e-05 24.6 0.7 1.6 1 1 0 1 1 1 1 Biopolymer transport protein ExbD/TolR IMP_cyclohyd PF07826.6 gi|84490181|ref|YP_448413.1| - 1e-64 217.5 1.2 1.1e-64 217.4 0.8 1.0 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein Beta_helix PF13229.1 gi|84490182|ref|YP_448414.1| - 0.00041 20.1 39.7 0.00041 20.1 27.5 10.3 2 1 6 9 9 9 3 Right handed beta helix region SVM_signal PF12113.3 gi|84490182|ref|YP_448414.1| - 5.5 6.9 12.3 0.23 11.3 2.6 3.3 2 0 0 2 2 2 0 SVM protein signal sequence DUF1416 PF07210.7 gi|84490183|ref|YP_448415.1| - 0.069 12.7 1.7 0.15 11.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1416) F420_ligase PF01996.11 gi|84490184|ref|YP_448416.1| - 3e-72 242.3 0.5 3.5e-72 242.1 0.3 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase UPF0052 PF01933.13 gi|84490185|ref|YP_448417.1| - 1.3e-43 149.4 0.5 1.7e-43 149.1 0.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 GGDN PF05165.7 gi|84490186|ref|YP_448418.1| - 1.5e-93 312.4 0.8 1.8e-93 312.1 0.5 1.0 1 0 0 1 1 1 1 GGDN family Dus PF01207.12 gi|84490187|ref|YP_448419.1| - 9.9e-09 34.4 1.1 2.6e-08 33.0 0.8 1.5 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DHO_dh PF01180.16 gi|84490187|ref|YP_448419.1| - 0.00034 19.6 0.9 0.32 9.8 0.1 2.8 2 1 1 3 3 3 2 Dihydroorotate dehydrogenase His_biosynth PF00977.16 gi|84490187|ref|YP_448419.1| - 0.0016 17.7 0.4 0.0031 16.8 0.2 1.5 1 1 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|84490187|ref|YP_448419.1| - 0.0022 16.9 0.3 0.0024 16.8 0.2 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain G3P_antiterm PF04309.7 gi|84490187|ref|YP_448419.1| - 0.0027 16.7 0.2 0.011 14.7 0.0 2.1 1 1 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator UBA PF00627.26 gi|84490188|ref|YP_448420.1| - 0.0073 16.1 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 UBA/TS-N domain DUF3606 PF12244.3 gi|84490188|ref|YP_448420.1| - 0.029 13.9 0.0 0.051 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) YflT PF11181.3 gi|84490188|ref|YP_448420.1| - 0.031 14.4 0.9 0.12 12.5 0.4 1.9 2 0 0 2 2 2 0 Heat induced stress protein YflT HTH_36 PF13730.1 gi|84490188|ref|YP_448420.1| - 0.073 13.2 1.5 9.4 6.4 0.1 2.6 2 1 1 3 3 3 0 Helix-turn-helix domain DUF4309 PF14172.1 gi|84490188|ref|YP_448420.1| - 0.078 12.9 0.1 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) NAD_binding_7 PF13241.1 gi|84490189|ref|YP_448421.1| - 6.6e-23 80.9 0.1 1.4e-22 79.8 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.14 gi|84490189|ref|YP_448421.1| - 3.4e-06 26.3 0.2 9e-06 24.9 0.0 1.7 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|84490189|ref|YP_448421.1| - 2.3e-05 24.3 0.7 2.3e-05 24.3 0.5 2.2 2 2 1 3 3 3 1 TrkA-N domain NmrA PF05368.8 gi|84490189|ref|YP_448421.1| - 8.8e-05 21.8 0.1 0.00014 21.1 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.1 gi|84490189|ref|YP_448421.1| - 0.00031 20.7 0.0 0.00049 20.1 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding ThiF PF00899.16 gi|84490189|ref|YP_448421.1| - 0.0012 18.6 2.6 0.05 13.4 0.2 2.5 1 1 1 2 2 2 1 ThiF family GFO_IDH_MocA PF01408.17 gi|84490189|ref|YP_448421.1| - 0.0094 16.4 0.0 0.022 15.2 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DUF2325 PF10087.4 gi|84490189|ref|YP_448421.1| - 0.041 13.7 0.7 0.17 11.7 0.2 2.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) AdoHcyase_NAD PF00670.16 gi|84490189|ref|YP_448421.1| - 0.05 13.4 0.2 0.12 12.1 0.2 1.6 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.15 gi|84490189|ref|YP_448421.1| - 0.054 13.5 0.6 0.15 12.1 0.1 2.0 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_C PF03720.10 gi|84490189|ref|YP_448421.1| - 0.061 13.4 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.10 gi|84490189|ref|YP_448421.1| - 0.067 13.0 0.1 0.19 11.5 0.0 1.8 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.7 gi|84490189|ref|YP_448421.1| - 0.068 12.5 0.1 0.13 11.6 0.0 1.6 1 1 1 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain ELFV_dehydrog PF00208.16 gi|84490189|ref|YP_448421.1| - 0.073 12.6 0.1 0.2 11.1 0.1 1.7 1 1 1 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F420_oxidored PF03807.12 gi|84490189|ref|YP_448421.1| - 0.13 12.7 0.1 0.53 10.7 0.0 2.0 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|84490190|ref|YP_448422.1| - 2.5e-34 118.2 0.2 2.5e-34 118.2 0.2 2.0 3 0 0 3 3 3 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.10 gi|84490190|ref|YP_448422.1| - 3.1e-33 114.5 0.9 3.3e-32 111.1 0.6 2.3 1 1 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.15 gi|84490190|ref|YP_448422.1| - 5.5e-22 77.6 5.1 1.3e-21 76.3 3.6 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.12 gi|84490190|ref|YP_448422.1| - 2.8e-06 27.6 0.4 9.1e-06 26.0 0.1 2.1 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.1 gi|84490190|ref|YP_448422.1| - 1.1e-05 25.5 0.0 3.4e-05 24.0 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.14 gi|84490190|ref|YP_448422.1| - 3.2e-05 23.1 0.1 6.6e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|84490190|ref|YP_448422.1| - 7.1e-05 21.9 0.3 0.00013 21.0 0.1 1.6 2 0 0 2 2 2 1 Saccharopine dehydrogenase THF_DHG_CYH_C PF02882.14 gi|84490190|ref|YP_448422.1| - 8.6e-05 21.6 0.5 0.0018 17.3 0.1 2.3 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_2 PF03446.10 gi|84490190|ref|YP_448422.1| - 0.00012 21.9 0.4 0.00039 20.2 0.0 2.0 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.13 gi|84490190|ref|YP_448422.1| - 0.0007 19.5 0.2 0.0025 17.7 0.2 2.0 1 0 0 1 1 1 1 TrkA-N domain AdoHcyase_NAD PF00670.16 gi|84490190|ref|YP_448422.1| - 0.0027 17.5 0.2 0.0068 16.2 0.0 1.7 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DapB_N PF01113.15 gi|84490190|ref|YP_448422.1| - 0.0095 15.8 0.1 0.024 14.5 0.0 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|84490190|ref|YP_448422.1| - 0.01 16.3 0.0 0.027 14.9 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_10 PF13460.1 gi|84490190|ref|YP_448422.1| - 0.019 14.9 0.0 0.035 14.1 0.0 1.5 1 0 0 1 1 1 0 NADH(P)-binding adh_short PF00106.20 gi|84490190|ref|YP_448422.1| - 0.022 14.6 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase Pyr_redox_2 PF07992.9 gi|84490190|ref|YP_448422.1| - 0.024 14.4 0.3 0.053 13.3 0.0 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Tautomerase PF01361.16 gi|84490191|ref|YP_448423.1| - 2.5e-14 52.5 0.0 2.8e-14 52.4 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.1 gi|84490191|ref|YP_448423.1| - 2.6e-05 24.1 0.0 2.6e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_3 PF14832.1 gi|84490191|ref|YP_448423.1| - 0.006 16.5 0.0 0.0067 16.4 0.0 1.0 1 0 0 1 1 1 1 Putative oxalocrotonate tautomerase enzyme VitD-bind_III PF09164.5 gi|84490191|ref|YP_448423.1| - 0.017 14.6 0.0 0.022 14.3 0.0 1.1 1 0 0 1 1 1 0 Vitamin D binding protein, domain III Spore_III_AF PF09581.5 gi|84490191|ref|YP_448423.1| - 0.13 12.0 0.5 0.16 11.8 0.4 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Usp PF00582.21 gi|84490192|ref|YP_448424.1| - 8.6e-34 116.7 0.2 9.8e-34 116.5 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family RNase_H PF00075.19 gi|84490192|ref|YP_448424.1| - 0.018 15.4 0.1 0.03 14.6 0.0 1.4 1 1 0 1 1 1 0 RNase H DUF3798 PF12683.2 gi|84490192|ref|YP_448424.1| - 0.046 12.8 1.0 3.8 6.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3798) ACT_5 PF13710.1 gi|84490192|ref|YP_448424.1| - 0.069 12.9 0.1 0.19 11.5 0.0 1.7 2 0 0 2 2 2 0 ACT domain Alba PF01918.16 gi|84490192|ref|YP_448424.1| - 0.086 12.4 0.2 3.6 7.2 0.0 2.3 2 0 0 2 2 2 0 Alba Asparaginase PF00710.15 gi|84490193|ref|YP_448425.1| - 4.3e-98 328.0 0.7 5.3e-98 327.7 0.5 1.1 1 0 0 1 1 1 1 Asparaginase PcrB PF01884.12 gi|84490193|ref|YP_448425.1| - 0.0069 15.6 0.8 1.5 7.9 0.1 2.3 2 0 0 2 2 2 2 PcrB family GatB_N PF02934.10 gi|84490194|ref|YP_448426.1| - 1.3e-74 250.6 1.3 2.2e-74 249.9 0.9 1.3 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|84490194|ref|YP_448426.1| - 7.7e-21 74.3 3.5 2.2e-20 72.8 2.4 1.8 1 0 0 1 1 1 1 GatB domain GAD PF02938.9 gi|84490194|ref|YP_448426.1| - 2.1e-14 53.4 0.8 7.4e-14 51.6 0.0 2.4 2 0 0 2 2 2 1 GAD domain YqeY PF09424.5 gi|84490194|ref|YP_448426.1| - 5.2e-08 32.8 7.7 2.5e-07 30.6 1.1 2.8 2 0 0 2 2 2 2 Yqey-like protein Pyr_redox_2 PF07992.9 gi|84490195|ref|YP_448427.1| - 8.3e-30 104.1 6.2 2.8e-29 102.4 3.6 2.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|84490195|ref|YP_448427.1| - 1.5e-18 67.5 0.5 1.5e-10 41.4 0.0 2.3 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|84490195|ref|YP_448427.1| - 9.8e-17 61.1 0.9 4.1e-14 52.7 0.0 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|84490195|ref|YP_448427.1| - 1.5e-09 37.1 5.0 1.2e-05 24.3 0.7 3.1 2 1 1 3 3 3 3 FAD binding domain HI0933_like PF03486.9 gi|84490195|ref|YP_448427.1| - 8.7e-09 34.3 1.8 7.3e-05 21.4 0.1 3.5 4 0 0 4 4 4 2 HI0933-like protein FAD_binding_3 PF01494.14 gi|84490195|ref|YP_448427.1| - 8.5e-08 31.6 3.4 0.018 14.0 0.2 3.1 2 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.2 gi|84490195|ref|YP_448427.1| - 1.1e-07 31.3 0.2 2.4e-05 23.5 0.0 2.8 3 0 0 3 3 3 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|84490195|ref|YP_448427.1| - 1.7e-07 30.4 3.3 0.004 16.0 0.4 3.7 3 1 0 4 4 4 3 Glucose inhibited division protein A Thi4 PF01946.12 gi|84490195|ref|YP_448427.1| - 2.8e-07 29.8 2.3 0.00015 20.9 0.2 2.7 3 1 1 4 4 4 2 Thi4 family DAO PF01266.19 gi|84490195|ref|YP_448427.1| - 3e-06 26.3 7.4 0.0052 15.7 0.7 3.6 4 0 0 4 4 4 3 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|84490195|ref|YP_448427.1| - 0.00014 21.7 0.5 0.05 13.6 0.3 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.1 gi|84490195|ref|YP_448427.1| - 0.00018 20.5 0.3 1.9 7.2 0.0 3.2 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.1 gi|84490195|ref|YP_448427.1| - 0.016 15.4 0.2 0.16 12.2 0.1 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding Lycopene_cycl PF05834.7 gi|84490195|ref|YP_448427.1| - 0.032 13.1 1.9 0.75 8.6 0.2 3.1 3 1 1 4 4 4 0 Lycopene cyclase protein Shikimate_DH PF01488.15 gi|84490195|ref|YP_448427.1| - 0.54 10.3 0.0 0.54 10.3 0.0 2.5 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase AAA PF00004.24 gi|84490197|ref|YP_448429.1| - 1.9e-37 128.4 0.4 4.5e-37 127.1 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|84490197|ref|YP_448429.1| - 2.2e-10 40.0 0.1 5.7e-10 38.6 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_2 PF07724.9 gi|84490197|ref|YP_448429.1| - 7.6e-09 35.7 0.0 2e-08 34.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) TIP49 PF06068.8 gi|84490197|ref|YP_448429.1| - 2.8e-08 32.8 0.0 7.9e-08 31.4 0.0 1.6 1 1 1 2 2 2 1 TIP49 C-terminus AAA_17 PF13207.1 gi|84490197|ref|YP_448429.1| - 4.6e-07 30.6 0.5 1.6e-06 28.9 0.2 2.2 2 1 0 2 2 1 1 AAA domain AAA_22 PF13401.1 gi|84490197|ref|YP_448429.1| - 1.6e-06 28.3 0.1 0.00015 21.8 0.1 2.6 1 1 0 1 1 1 1 AAA domain Bac_DnaA PF00308.13 gi|84490197|ref|YP_448429.1| - 2.2e-06 27.4 0.3 3.8e-06 26.7 0.2 1.4 1 0 0 1 1 1 1 Bacterial dnaA protein RNA_helicase PF00910.17 gi|84490197|ref|YP_448429.1| - 2.4e-06 27.6 0.7 2.7e-05 24.2 0.0 2.8 2 2 0 2 2 2 1 RNA helicase AAA_5 PF07728.9 gi|84490197|ref|YP_448429.1| - 5.2e-06 26.2 0.1 3.2e-05 23.6 0.0 2.5 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|84490197|ref|YP_448429.1| - 2.8e-05 24.2 0.0 0.0016 18.4 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.12 gi|84490197|ref|YP_448429.1| - 3.5e-05 23.2 0.0 7.2e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.1 gi|84490197|ref|YP_448429.1| - 9.7e-05 22.6 2.5 0.00013 22.2 0.1 2.5 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.1 gi|84490197|ref|YP_448429.1| - 0.00026 20.8 0.1 0.00071 19.4 0.0 1.8 2 0 0 2 2 1 1 AAA domain Mg_chelatase PF01078.16 gi|84490197|ref|YP_448429.1| - 0.00026 20.1 0.1 0.00065 18.9 0.0 1.8 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI KaiC PF06745.8 gi|84490197|ref|YP_448429.1| - 0.00027 20.1 0.2 0.53 9.3 0.0 2.3 1 1 1 2 2 2 2 KaiC DUF815 PF05673.8 gi|84490197|ref|YP_448429.1| - 0.0011 17.9 0.0 0.0018 17.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_28 PF13521.1 gi|84490197|ref|YP_448429.1| - 0.0012 18.8 0.0 0.0037 17.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|84490197|ref|YP_448429.1| - 0.0021 17.4 0.0 0.0067 15.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.12 gi|84490197|ref|YP_448429.1| - 0.0026 16.6 0.0 0.005 15.7 0.0 1.4 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_3 PF07726.6 gi|84490197|ref|YP_448429.1| - 0.0031 17.0 0.0 0.0066 16.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|84490197|ref|YP_448429.1| - 0.0032 17.3 0.0 0.0098 15.7 0.0 1.9 2 0 0 2 2 1 1 AAA domain DUF2075 PF09848.4 gi|84490197|ref|YP_448429.1| - 0.0041 16.1 1.0 0.0075 15.2 0.0 2.0 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.7 gi|84490197|ref|YP_448429.1| - 0.0046 16.6 0.0 0.014 15.0 0.0 1.8 2 0 0 2 2 1 1 NACHT domain SKI PF01202.17 gi|84490197|ref|YP_448429.1| - 0.0072 16.2 0.0 0.024 14.4 0.0 1.9 2 0 0 2 2 1 1 Shikimate kinase NTPase_1 PF03266.10 gi|84490197|ref|YP_448429.1| - 0.01 15.5 0.3 4.2 7.0 0.0 2.8 3 0 0 3 3 2 0 NTPase Torsin PF06309.6 gi|84490197|ref|YP_448429.1| - 0.022 14.6 0.0 0.055 13.3 0.0 1.7 1 0 0 1 1 1 0 Torsin AAA_24 PF13479.1 gi|84490197|ref|YP_448429.1| - 0.024 14.2 0.0 0.11 12.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|84490197|ref|YP_448429.1| - 0.025 14.0 0.0 0.22 10.9 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain DNA_pol3_delta2 PF13177.1 gi|84490197|ref|YP_448429.1| - 0.034 13.8 0.9 2.7 7.6 0.0 3.2 1 1 1 2 2 2 0 DNA polymerase III, delta subunit Zeta_toxin PF06414.7 gi|84490197|ref|YP_448429.1| - 0.036 13.1 0.0 0.093 11.8 0.0 1.7 1 1 0 1 1 1 0 Zeta toxin ATP-synt_ab PF00006.20 gi|84490197|ref|YP_448429.1| - 0.045 13.2 0.0 0.076 12.4 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain FtsK_SpoIIIE PF01580.13 gi|84490197|ref|YP_448429.1| - 0.064 12.7 0.0 1 8.8 0.0 2.1 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_11 PF13086.1 gi|84490197|ref|YP_448429.1| - 0.067 12.7 1.0 0.25 10.9 0.2 2.2 1 1 1 2 2 2 0 AAA domain DUF258 PF03193.11 gi|84490197|ref|YP_448429.1| - 0.081 12.1 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MMR_HSR1 PF01926.18 gi|84490197|ref|YP_448429.1| - 0.11 12.4 0.2 2.8 7.9 0.0 2.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase ELFV_dehydrog PF00208.16 gi|84490198|ref|YP_448430.1| - 2.1e-86 289.4 3.4 2.1e-86 289.4 2.4 1.4 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|84490198|ref|YP_448430.1| - 6.8e-49 164.7 0.0 1.3e-48 163.9 0.0 1.5 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AlaDh_PNT_C PF01262.16 gi|84490198|ref|YP_448430.1| - 0.014 15.0 0.0 0.027 14.0 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TelA PF05816.6 gi|84490198|ref|YP_448430.1| - 0.046 12.4 1.0 0.29 9.7 0.1 2.1 2 0 0 2 2 2 0 Toxic anion resistance protein (TelA) Pyr_redox_3 PF13738.1 gi|84490198|ref|YP_448430.1| - 0.057 13.4 0.3 0.31 11.0 0.0 2.1 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase MatE PF01554.13 gi|84490199|ref|YP_448431.1| - 3.2e-46 156.8 51.6 6.2e-25 87.7 12.8 3.0 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.1 gi|84490199|ref|YP_448431.1| - 2.7e-09 36.9 32.7 8.7e-09 35.3 10.5 4.9 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Hjc PF01870.13 gi|84490200|ref|YP_448432.1| - 9.6e-29 98.8 0.0 1.2e-28 98.5 0.0 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) Pyridox_oxidase PF01243.15 gi|84490201|ref|YP_448433.1| - 0.00013 21.8 0.0 0.00015 21.6 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Lipoprotein_15 PF03640.10 gi|84490201|ref|YP_448433.1| - 0.56 9.7 2.3 1 8.8 1.6 1.5 1 1 0 1 1 1 0 Secreted repeat of unknown function zf-Tim10_DDP PF02953.10 gi|84490201|ref|YP_448433.1| - 1.2 8.4 5.0 20 4.5 2.6 2.1 2 0 0 2 2 2 0 Tim10/DDP family zinc finger DHODB_Fe-S_bind PF10418.4 gi|84490202|ref|YP_448434.1| - 1.4e-13 50.0 4.5 2.7e-13 49.1 3.1 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|84490202|ref|YP_448434.1| - 4.3e-05 23.5 0.0 7.2e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.16 gi|84490202|ref|YP_448434.1| - 0.0032 17.9 0.6 0.015 15.8 0.4 2.0 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Thiolase_N PF00108.18 gi|84490202|ref|YP_448434.1| - 0.056 12.4 0.0 0.078 11.9 0.0 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain DHO_dh PF01180.16 gi|84490203|ref|YP_448435.1| - 2.4e-72 243.4 1.2 2.7e-72 243.2 0.8 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|84490203|ref|YP_448435.1| - 1.2e-12 47.3 0.0 6.1e-11 41.7 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|84490203|ref|YP_448435.1| - 1.3e-05 24.6 0.1 0.00028 20.2 0.0 2.7 3 1 0 3 3 3 1 Histidine biosynthesis protein PcrB PF01884.12 gi|84490203|ref|YP_448435.1| - 0.0015 17.8 0.2 1.6 7.9 0.1 2.5 1 1 1 2 2 2 2 PcrB family NMO PF03060.10 gi|84490203|ref|YP_448435.1| - 0.011 14.9 0.6 0.15 11.1 0.4 2.5 1 1 0 1 1 1 0 Nitronate monooxygenase FMN_dh PF01070.13 gi|84490203|ref|YP_448435.1| - 0.034 12.9 0.1 0.26 10.1 0.0 2.2 2 1 0 2 2 2 0 FMN-dependent dehydrogenase DUF561 PF04481.7 gi|84490203|ref|YP_448435.1| - 0.34 9.8 2.4 3 6.7 0.0 2.8 2 1 0 3 3 3 0 Protein of unknown function (DUF561) Nop PF01798.13 gi|84490204|ref|YP_448436.1| - 4.2e-50 168.9 1.4 9.2e-50 167.8 0.1 2.2 2 1 1 3 3 3 1 Putative snoRNA binding domain NOSIC PF08060.8 gi|84490204|ref|YP_448436.1| - 4.8e-12 45.4 0.4 1.7e-11 43.7 0.2 2.0 1 0 0 1 1 1 1 NOSIC (NUC001) domain DUF1168 PF06658.7 gi|84490204|ref|YP_448436.1| - 7.2 6.1 25.0 18 4.8 17.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Fibrillarin PF01269.12 gi|84490205|ref|YP_448437.1| - 1.4e-90 302.2 0.1 1.6e-90 302.0 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin Methyltransf_31 PF13847.1 gi|84490205|ref|YP_448437.1| - 0.027 14.0 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.2 gi|84490205|ref|YP_448437.1| - 0.089 13.3 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DFP PF04127.10 gi|84490206|ref|YP_448438.1| - 1.9e-54 184.0 0.4 1.9e-54 184.0 0.3 1.6 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|84490206|ref|YP_448438.1| - 4e-23 81.5 3.2 6.5e-23 80.8 0.9 2.2 2 0 0 2 2 2 1 Flavoprotein NAD_binding_4 PF07993.7 gi|84490206|ref|YP_448438.1| - 0.016 14.1 0.0 0.027 13.3 0.0 1.3 1 0 0 1 1 1 0 Male sterility protein DUF3798 PF12683.2 gi|84490206|ref|YP_448438.1| - 0.02 14.0 0.9 0.095 11.7 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3798) PsbP PF01789.11 gi|84490207|ref|YP_448439.1| - 7.6e-06 25.4 0.7 3.8e-05 23.2 0.5 1.9 1 1 0 1 1 1 1 PsbP DUF1795 PF08786.6 gi|84490207|ref|YP_448439.1| - 0.0035 17.1 0.0 0.0047 16.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1795) Rtf2 PF04641.7 gi|84490208|ref|YP_448440.1| - 4.7 6.3 13.0 10 5.2 9.0 1.6 1 1 0 1 1 1 0 Rtf2 RING-finger MRP-S23 PF10484.4 gi|84490208|ref|YP_448440.1| - 6.9 6.5 8.2 7.3 6.5 2.1 2.2 2 0 0 2 2 2 0 Mitochondrial ribosomal protein S23 PDT PF00800.13 gi|84490209|ref|YP_448441.1| - 1.5e-59 200.6 0.2 1.8e-59 200.3 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|84490209|ref|YP_448441.1| - 4.4e-06 26.0 0.0 8.9e-06 25.0 0.0 1.5 1 0 0 1 1 1 1 ACT domain CBS PF00571.23 gi|84490210|ref|YP_448442.1| - 1.6e-50 168.6 16.9 2e-14 53.1 0.1 4.1 4 0 0 4 4 4 4 CBS domain WGG PF10273.4 gi|84490210|ref|YP_448442.1| - 0.041 13.9 0.0 0.31 11.1 0.1 2.4 2 0 0 2 2 2 0 Pre-rRNA-processing protein TSR2 Ribosomal_L9_C PF03948.9 gi|84490210|ref|YP_448442.1| - 0.048 13.7 0.3 0.72 9.9 0.0 2.8 3 0 0 3 3 3 0 Ribosomal protein L9, C-terminal domain PduV-EutP PF10662.4 gi|84490210|ref|YP_448442.1| - 0.5 9.8 7.0 2.2 7.7 0.1 3.5 3 1 1 4 4 4 0 Ethanolamine utilisation - propanediol utilisation CBS PF00571.23 gi|84490211|ref|YP_448443.1| - 3e-57 190.1 10.4 2.9e-17 62.1 0.3 4.1 4 0 0 4 4 4 4 CBS domain PRC PF05239.11 gi|84490211|ref|YP_448443.1| - 0.0043 16.8 12.5 0.039 13.8 0.2 4.5 3 1 1 4 4 4 2 PRC-barrel domain DUF3659 PF12396.3 gi|84490211|ref|YP_448443.1| - 2.1 8.1 6.3 2.6 7.7 0.2 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3659) CBS PF00571.23 gi|84490212|ref|YP_448444.1| - 1.7e-18 66.1 4.0 5.2e-09 35.7 0.2 2.3 2 0 0 2 2 2 2 CBS domain DUF4428 PF14471.1 gi|84490212|ref|YP_448444.1| - 0.2 11.4 5.8 0.17 11.6 1.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) TF_Zn_Ribbon PF08271.7 gi|84490212|ref|YP_448444.1| - 0.43 9.9 3.5 1.3 8.3 2.4 1.9 1 0 0 1 1 1 0 TFIIB zinc-binding Fer4_14 PF13394.1 gi|84490213|ref|YP_448445.1| - 2.1e-06 27.7 0.1 5.7e-06 26.3 0.0 1.7 1 1 1 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|84490213|ref|YP_448445.1| - 0.00052 20.2 0.1 0.00089 19.4 0.1 1.6 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|84490213|ref|YP_448445.1| - 0.00057 20.0 0.3 0.0018 18.4 0.0 1.9 1 1 1 2 2 2 1 4Fe-4S single cluster domain Peptidase_C93 PF06035.6 gi|84490213|ref|YP_448445.1| - 0.11 11.9 0.4 0.21 10.9 0.1 1.6 2 0 0 2 2 2 0 Bacterial transglutaminase-like cysteine proteinase BTLCP PTPS PF01242.14 gi|84490214|ref|YP_448446.1| - 3.1e-30 104.3 0.1 4.9e-30 103.7 0.0 1.3 1 1 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF366 PF04017.7 gi|84490215|ref|YP_448447.1| - 2.4e-70 235.5 3.2 2.6e-70 235.3 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) AMNp_N PF10423.4 gi|84490215|ref|YP_448447.1| - 0.051 13.1 0.3 0.075 12.6 0.2 1.2 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus ACT_4 PF13291.1 gi|84490217|ref|YP_448449.1| - 0.0021 18.3 0.4 0.0078 16.5 0.0 2.0 2 0 0 2 2 2 1 ACT domain Transketolase_C PF02780.15 gi|84490217|ref|YP_448449.1| - 0.034 14.0 0.1 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Transketolase, C-terminal domain DNA_PPF PF02916.10 gi|84490217|ref|YP_448449.1| - 0.053 13.5 0.1 0.84 9.7 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase processivity factor ACT PF01842.20 gi|84490218|ref|YP_448450.1| - 1.9e-06 27.2 0.1 9.3e-06 25.0 0.0 2.3 2 2 1 3 3 3 1 ACT domain ACT_4 PF13291.1 gi|84490218|ref|YP_448450.1| - 4.4e-05 23.7 0.5 0.00012 22.3 0.0 1.9 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.1 gi|84490218|ref|YP_448450.1| - 0.00096 18.6 0.0 0.0029 17.0 0.0 1.8 1 0 0 1 1 1 1 ACT domain Transketolase_C PF02780.15 gi|84490218|ref|YP_448450.1| - 0.021 14.7 0.3 0.41 10.5 0.0 2.3 1 1 1 2 2 2 0 Transketolase, C-terminal domain zinc_ribbon_5 PF13719.1 gi|84490219|ref|YP_448451.1| - 7.2e-06 25.4 2.6 0.035 13.7 0.2 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|84490219|ref|YP_448451.1| - 1.1e-05 24.9 3.2 0.031 13.9 0.2 2.3 2 0 0 2 2 2 2 zinc-ribbon domain UPF0547 PF10571.4 gi|84490219|ref|YP_448451.1| - 0.00067 19.2 0.6 0.081 12.6 0.0 2.6 3 0 0 3 3 2 2 Uncharacterised protein family UPF0547 DUF951 PF06107.6 gi|84490219|ref|YP_448451.1| - 0.012 15.1 0.8 0.14 11.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) CpXC PF14353.1 gi|84490219|ref|YP_448451.1| - 0.019 14.9 0.3 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 CpXC protein zf-H2C2_2 PF13465.1 gi|84490219|ref|YP_448451.1| - 0.029 14.6 0.9 2.6 8.4 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain FYVE PF01363.16 gi|84490219|ref|YP_448451.1| - 0.055 13.3 2.6 0.057 13.3 1.8 1.1 1 0 0 1 1 1 0 FYVE zinc finger DZR PF12773.2 gi|84490219|ref|YP_448451.1| - 0.075 12.8 8.6 0.9 9.4 6.0 2.1 1 1 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|84490219|ref|YP_448451.1| - 0.079 12.4 9.3 0.44 10.0 0.1 3.0 2 1 1 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|84490219|ref|YP_448451.1| - 0.11 11.7 0.8 0.11 11.7 0.5 2.9 2 1 0 2 2 2 0 zinc-ribbon domain Rubredoxin PF00301.15 gi|84490219|ref|YP_448451.1| - 0.14 12.0 7.9 2.5 8.0 5.3 2.3 1 1 1 2 2 2 0 Rubredoxin DUF1660 PF07874.6 gi|84490219|ref|YP_448451.1| - 0.3 11.3 5.1 0.26 11.5 2.7 1.7 1 1 0 1 1 1 0 Prophage protein (DUF1660) zf-C2HC_2 PF13913.1 gi|84490219|ref|YP_448451.1| - 0.89 9.2 0.1 0.89 9.2 0.1 2.9 3 0 0 3 3 2 0 zinc-finger of a C2HC-type TerY-C PF15616.1 gi|84490219|ref|YP_448451.1| - 1 9.3 7.2 1.1 9.1 5.0 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain FYDLN_acid PF09538.5 gi|84490219|ref|YP_448451.1| - 1.2 9.7 4.4 25 5.5 3.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) HypA PF01155.14 gi|84490219|ref|YP_448451.1| - 2.3 7.9 6.3 18 5.0 4.5 1.9 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family zf-RING_4 PF14570.1 gi|84490219|ref|YP_448451.1| - 3 7.4 10.1 88 2.7 7.1 2.1 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain TF_Zn_Ribbon PF08271.7 gi|84490219|ref|YP_448451.1| - 3.3 7.1 9.1 3 7.2 1.1 2.5 1 1 1 2 2 2 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|84490219|ref|YP_448451.1| - 3.4 7.3 8.5 14 5.4 0.1 2.2 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|84490219|ref|YP_448451.1| - 8.6 6.0 14.0 2.7e+02 1.2 9.7 2.8 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S26e PF01283.14 gi|84490220|ref|YP_448452.1| - 0.12 12.6 0.2 0.12 12.6 0.2 1.5 2 0 0 2 2 2 0 Ribosomal protein S26e Rubredoxin PF00301.15 gi|84490220|ref|YP_448452.1| - 0.12 12.2 7.9 3.7 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin zinc_ribbon_5 PF13719.1 gi|84490220|ref|YP_448452.1| - 0.25 10.9 6.7 0.39 10.3 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|84490220|ref|YP_448452.1| - 0.4 10.3 7.3 0.41 10.3 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|84490220|ref|YP_448452.1| - 2.5 7.8 13.5 3.1 7.5 9.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.2 gi|84490220|ref|YP_448452.1| - 2.6 8.1 11.6 1.2 9.2 6.7 1.5 1 1 0 1 1 1 0 RING-variant domain DNA_RNApol_7kD PF03604.8 gi|84490220|ref|YP_448452.1| - 4.2 6.9 18.2 5 6.6 2.1 2.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit FeoB_N PF02421.13 gi|84490221|ref|YP_448453.1| - 6.3e-63 210.7 0.4 1.2e-62 209.8 0.3 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|84490221|ref|YP_448453.1| - 4.2e-45 152.1 20.9 7.7e-29 99.7 4.0 2.5 2 0 0 2 2 2 2 Nucleoside recognition FeoB_C PF07664.7 gi|84490221|ref|YP_448453.1| - 2e-21 75.1 1.2 2e-21 75.1 0.8 2.5 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.18 gi|84490221|ref|YP_448453.1| - 2e-17 63.2 0.1 5.2e-17 61.8 0.1 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.5 gi|84490221|ref|YP_448453.1| - 0.00024 20.3 0.0 0.00039 19.7 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Miro PF08477.8 gi|84490221|ref|YP_448453.1| - 0.0035 17.8 0.0 0.012 16.0 0.0 2.0 1 1 1 2 2 2 1 Miro-like protein Arf PF00025.16 gi|84490221|ref|YP_448453.1| - 0.014 14.6 0.0 0.029 13.6 0.0 1.6 1 1 0 1 1 1 0 ADP-ribosylation factor family AIG1 PF04548.11 gi|84490221|ref|YP_448453.1| - 0.019 14.0 0.1 0.061 12.4 0.0 1.8 2 0 0 2 2 2 0 AIG1 family AAA_17 PF13207.1 gi|84490221|ref|YP_448453.1| - 0.03 15.1 0.1 25 5.7 0.0 3.3 3 0 0 3 3 3 0 AAA domain Dynamin_N PF00350.18 gi|84490221|ref|YP_448453.1| - 0.037 13.8 0.3 1.9 8.3 0.1 2.4 1 1 1 2 2 2 0 Dynamin family GTP_EFTU PF00009.22 gi|84490221|ref|YP_448453.1| - 0.073 12.4 0.3 2 7.8 0.2 2.7 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.7 gi|84490221|ref|YP_448453.1| - 0.095 11.8 0.0 0.15 11.1 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region FeoA PF04023.9 gi|84490222|ref|YP_448454.1| - 7.6e-14 51.4 0.1 8.2e-14 51.3 0.0 1.0 1 0 0 1 1 1 1 FeoA domain Ehbp PF10622.4 gi|84490223|ref|YP_448455.1| - 4.6e-41 138.6 1.2 5.4e-41 138.4 0.8 1.0 1 0 0 1 1 1 1 Energy-converting hydrogenase B subunit P (EhbP) NADHdh PF00146.16 gi|84490224|ref|YP_448456.1| - 1.7e-14 53.6 18.3 3.9e-10 39.2 4.5 2.1 2 0 0 2 2 2 2 NADH dehydrogenase Complex1_49kDa PF00346.14 gi|84490225|ref|YP_448457.1| - 1.7e-24 86.2 0.2 9.6e-23 80.5 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|84490225|ref|YP_448457.1| - 1.3e-16 60.4 0.6 4.5e-12 45.4 0.0 2.9 3 0 0 3 3 3 2 Nickel-dependent hydrogenase RecR PF02132.10 gi|84490225|ref|YP_448457.1| - 0.55 9.7 2.9 9.3 5.7 0.1 2.7 3 0 0 3 3 3 0 RecR protein Oxidored_q6 PF01058.17 gi|84490226|ref|YP_448458.1| - 2.2e-26 91.9 0.3 2.7e-26 91.7 0.2 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4_9 PF13187.1 gi|84490227|ref|YP_448459.1| - 4.2e-11 42.9 21.2 1.9e-08 34.4 7.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84490227|ref|YP_448459.1| - 2.1e-10 39.7 15.7 2.3e-05 23.7 4.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84490227|ref|YP_448459.1| - 7.9e-10 38.9 10.1 1.5e-09 38.1 7.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84490227|ref|YP_448459.1| - 8.1e-09 35.1 6.3 0.00021 20.9 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490227|ref|YP_448459.1| - 1.4e-07 31.0 16.4 0.0017 18.1 2.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84490227|ref|YP_448459.1| - 2.7e-07 30.3 11.4 0.0003 20.5 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84490227|ref|YP_448459.1| - 2.8e-07 30.3 12.0 0.00061 19.9 1.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|84490227|ref|YP_448459.1| - 4.3e-07 30.2 8.9 0.0031 17.8 1.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84490227|ref|YP_448459.1| - 1.7e-06 27.9 10.9 6.1e-06 26.1 7.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84490227|ref|YP_448459.1| - 8.7e-06 26.4 8.6 0.00022 21.9 6.2 2.3 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84490227|ref|YP_448459.1| - 2.3e-05 24.0 16.3 0.015 15.2 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84490227|ref|YP_448459.1| - 7.9e-05 22.9 9.5 0.026 14.8 0.4 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490227|ref|YP_448459.1| - 0.00013 22.2 18.9 0.001 19.4 4.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|84490227|ref|YP_448459.1| - 0.21 11.9 14.1 0.33 11.3 1.6 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|84490227|ref|YP_448459.1| - 0.45 11.1 13.4 0.54 10.8 1.2 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.22 gi|84490228|ref|YP_448460.1| - 4.6e-66 215.9 148.0 1.7e-07 30.5 2.2 14.9 15 0 0 15 15 15 14 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84490228|ref|YP_448460.1| - 3.3e-55 184.2 126.4 4.8e-09 36.4 8.2 8.8 7 1 2 9 9 9 9 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|84490228|ref|YP_448460.1| - 8.7e-48 160.4 131.2 1.6e-09 37.8 8.9 8.7 6 1 4 10 10 10 10 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84490228|ref|YP_448460.1| - 3.8e-42 141.8 132.7 1.8e-07 30.8 10.1 10.2 3 3 11 14 14 14 13 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490228|ref|YP_448460.1| - 3e-38 128.0 149.8 7.2e-06 25.6 2.0 15.0 14 1 0 14 14 14 12 4Fe-4S binding domain Fer4_16 PF13484.1 gi|84490228|ref|YP_448460.1| - 4.2e-38 129.9 111.8 0.00029 21.5 0.9 14.0 12 2 3 15 15 15 13 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84490228|ref|YP_448460.1| - 8e-33 110.3 136.9 0.00018 21.2 2.0 14.5 14 1 0 14 14 14 13 4Fe-4S binding domain Fer4_21 PF14697.1 gi|84490228|ref|YP_448460.1| - 4.2e-30 103.3 120.4 1.5e-06 27.9 7.6 9.0 6 2 3 9 9 9 8 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84490228|ref|YP_448460.1| - 2.2e-25 88.4 128.0 3.4e-05 23.7 7.6 10.6 4 4 6 11 11 11 11 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84490228|ref|YP_448460.1| - 4.5e-24 82.6 135.8 0.0017 18.5 1.7 14.3 14 0 0 14 14 14 12 4Fe-4S binding domain Fer4_17 PF13534.1 gi|84490228|ref|YP_448460.1| - 4.3e-22 78.2 126.1 1.9e-06 28.0 6.6 13.4 6 4 5 11 11 11 10 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490228|ref|YP_448460.1| - 1.1e-18 66.2 169.8 0.003 17.9 3.6 14.6 14 1 0 14 14 14 12 4Fe-4S binding domain Fer4_18 PF13746.1 gi|84490228|ref|YP_448460.1| - 2.9e-15 56.4 140.8 0.0036 17.6 1.6 14.1 6 3 7 13 13 13 10 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|84490228|ref|YP_448460.1| - 7.7e-09 35.3 81.3 0.004 17.0 7.7 7.7 1 1 5 7 7 7 5 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84490228|ref|YP_448460.1| - 0.013 16.0 0.7 0.013 16.0 0.5 14.3 8 4 4 13 13 12 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84490228|ref|YP_448460.1| - 0.24 11.8 125.8 0.2 12.0 2.5 13.3 13 1 0 13 13 11 0 4Fe-4S single cluster domain Spore_permease PF03845.8 gi|84490229|ref|YP_448461.1| - 0.018 13.6 1.7 0.018 13.6 1.1 1.5 2 0 0 2 2 2 0 Spore germination protein BioY PF02632.9 gi|84490229|ref|YP_448461.1| - 0.019 14.6 8.5 0.032 13.8 5.9 1.4 1 1 0 1 1 1 0 BioY family DUF4203 PF13886.1 gi|84490229|ref|YP_448461.1| - 0.1 12.0 6.8 0.042 13.3 2.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4203) Choline_transpo PF04515.7 gi|84490229|ref|YP_448461.1| - 0.13 10.9 1.3 0.2 10.3 0.9 1.3 1 0 0 1 1 1 0 Plasma-membrane choline transporter ABC2_membrane_5 PF13346.1 gi|84490229|ref|YP_448461.1| - 1.1 8.4 7.8 1.4 8.1 5.4 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein FeoB_C PF07664.7 gi|84490229|ref|YP_448461.1| - 1.4 8.4 5.4 1.9 7.9 0.1 2.9 3 0 0 3 3 3 0 Ferrous iron transport protein B C terminus Trep_Strep PF09605.5 gi|84490229|ref|YP_448461.1| - 1.7 8.2 10.5 0.22 11.1 2.1 2.0 1 1 1 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) MnhB PF04039.8 gi|84490230|ref|YP_448462.1| - 7.8e-30 103.4 12.4 9.3e-30 103.2 8.6 1.1 1 0 0 1 1 1 1 Domain related to MnhB subunit of Na+/H+ antiporter DUF2105 PF09878.4 gi|84490230|ref|YP_448462.1| - 1 8.8 7.2 0.49 9.9 3.6 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2105) DUF2106 PF09879.4 gi|84490231|ref|YP_448463.1| - 0.021 14.1 0.9 0.025 13.9 0.2 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2106) MnhB PF04039.8 gi|84490231|ref|YP_448463.1| - 0.064 13.3 4.5 0.088 12.8 3.1 1.2 1 0 0 1 1 1 0 Domain related to MnhB subunit of Na+/H+ antiporter SHR3_chaperone PF08229.6 gi|84490232|ref|YP_448464.1| - 3.7 6.4 7.6 1.2 8.0 3.1 1.6 1 1 1 2 2 2 0 ER membrane protein SH3 Oxidored_q1 PF00361.15 gi|84490233|ref|YP_448465.1| - 1.6e-31 109.6 20.0 1.6e-31 109.6 13.9 3.1 2 1 2 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains NADHdeh_related PF10125.4 gi|84490233|ref|YP_448465.1| - 2.3e-05 23.6 7.1 2.3e-05 23.6 4.9 2.9 1 1 0 2 2 2 2 NADH dehydrogenase I, subunit N related protein Oxidored_q2 PF00420.19 gi|84490234|ref|YP_448466.1| - 2.1e-17 62.4 9.3 2.9e-17 62.0 6.5 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2108 PF09881.4 gi|84490234|ref|YP_448466.1| - 0.011 15.5 5.0 0.011 15.5 3.5 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF1146 PF06612.6 gi|84490234|ref|YP_448466.1| - 0.1 12.5 0.1 0.1 12.5 0.0 2.9 3 2 0 3 3 3 0 Protein of unknown function (DUF1146) ATP1G1_PLM_MAT8 PF02038.11 gi|84490234|ref|YP_448466.1| - 0.48 9.4 2.5 1.1 8.3 1.7 1.5 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family DUF4040 PF13244.1 gi|84490235|ref|YP_448467.1| - 4.2e-16 58.6 7.5 5.6e-16 58.2 5.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4040) V_ATPase_I PF01496.14 gi|84490235|ref|YP_448467.1| - 0.05 11.4 1.3 0.059 11.2 0.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3318 PF11780.3 gi|84490235|ref|YP_448467.1| - 0.14 11.6 0.5 0.23 11.0 0.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3318) DUF1212 PF06738.7 gi|84490235|ref|YP_448467.1| - 0.16 11.3 2.8 0.19 11.2 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) SPC12 PF06645.8 gi|84490235|ref|YP_448467.1| - 2.9 7.7 5.7 1.5 8.7 2.5 1.6 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF805 PF05656.9 gi|84490235|ref|YP_448467.1| - 6.6 6.5 6.3 12 5.7 4.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF805) PhaG_MnhG_YufB PF03334.9 gi|84490236|ref|YP_448468.1| - 1.5e-09 37.7 6.1 2.9e-09 36.8 4.2 1.5 1 1 0 1 1 1 1 Na+/H+ antiporter subunit PRA1 PF03208.14 gi|84490236|ref|YP_448468.1| - 0.086 12.1 0.6 0.1 11.9 0.4 1.1 1 0 0 1 1 1 0 PRA1 family protein YtpI PF14007.1 gi|84490236|ref|YP_448468.1| - 1 9.3 4.3 0.21 11.5 0.4 1.7 2 0 0 2 2 2 0 YtpI-like protein MrpF_PhaF PF04066.8 gi|84490237|ref|YP_448469.1| - 7.9e-08 32.4 6.0 7.9e-08 32.4 4.1 1.8 2 0 0 2 2 2 1 Multiple resistance and pH regulation protein F (MrpF / PhaF) DUF2723 PF11028.3 gi|84490237|ref|YP_448469.1| - 0.37 10.2 4.2 0.45 9.9 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) DUF2512 PF10710.4 gi|84490237|ref|YP_448469.1| - 2.4 7.5 5.3 2.9 7.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) DUF4006 PF13179.1 gi|84490237|ref|YP_448469.1| - 2.8 7.5 5.2 1.4 8.5 2.1 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF4006) MNHE PF01899.11 gi|84490238|ref|YP_448470.1| - 7e-17 61.5 0.4 7.5e-17 61.4 0.3 1.0 1 0 0 1 1 1 1 Na+/H+ ion antiporter subunit DUF457 PF04307.9 gi|84490239|ref|YP_448471.1| - 4.8e-20 71.4 33.0 3.4e-10 39.4 12.0 2.2 1 1 1 2 2 2 2 Predicted membrane-bound metal-dependent hydrolase (DUF457) Zn_dep_PLPC PF00882.13 gi|84490239|ref|YP_448471.1| - 0.0094 15.6 0.2 0.046 13.3 0.1 2.0 1 1 0 1 1 1 1 Zinc dependent phospholipase C Arginosuc_synth PF00764.14 gi|84490240|ref|YP_448472.1| - 2.2e-169 563.6 0.7 2.5e-169 563.4 0.5 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 gi|84490240|ref|YP_448472.1| - 1e-06 28.4 0.0 1.5e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|84490240|ref|YP_448472.1| - 0.00089 18.5 0.0 0.0017 17.6 0.0 1.5 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|84490240|ref|YP_448472.1| - 0.0097 14.4 0.0 0.017 13.6 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|84490240|ref|YP_448472.1| - 0.033 13.0 0.0 0.056 12.3 0.0 1.3 1 0 0 1 1 1 0 NAD synthase DUF362 PF04015.7 gi|84490240|ref|YP_448472.1| - 0.053 12.9 0.2 3.9 6.9 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF362) ATP_bind_3 PF01171.15 gi|84490240|ref|YP_448472.1| - 0.11 11.9 0.0 0.3 10.5 0.0 1.8 2 0 0 2 2 2 0 PP-loop family Pyr_redox_2 PF07992.9 gi|84490241|ref|YP_448473.1| - 6.2e-39 133.9 6.1 6.2e-37 127.4 4.3 3.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|84490241|ref|YP_448473.1| - 1.6e-27 95.7 7.2 9.9e-19 67.5 0.2 4.7 4 0 0 4 4 4 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|84490241|ref|YP_448473.1| - 1.9e-15 57.4 1.5 7.7e-08 32.6 0.0 3.3 2 1 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|84490241|ref|YP_448473.1| - 2.4e-12 46.0 4.0 0.004 15.6 0.0 4.6 4 1 1 5 5 5 4 HI0933-like protein Pyr_redox_dim PF02852.17 gi|84490241|ref|YP_448473.1| - 4e-12 46.1 0.2 1.1e-11 44.7 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.19 gi|84490241|ref|YP_448473.1| - 5.2e-10 38.7 5.0 0.074 11.9 0.0 4.1 3 1 1 4 4 4 3 FAD dependent oxidoreductase K_oxygenase PF13434.1 gi|84490241|ref|YP_448473.1| - 2.1e-08 33.5 0.0 4.3e-06 25.8 0.0 2.7 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.1 gi|84490241|ref|YP_448473.1| - 4.1e-08 33.1 0.0 0.00045 20.2 0.0 2.7 3 0 0 3 3 2 2 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|84490241|ref|YP_448473.1| - 7.8e-08 31.6 0.7 0.0015 17.6 0.0 3.1 3 0 0 3 3 3 2 Thi4 family FAD_binding_2 PF00890.19 gi|84490241|ref|YP_448473.1| - 5e-07 28.9 0.5 0.06 12.1 0.0 4.0 4 0 0 4 4 4 2 FAD binding domain NAD_binding_9 PF13454.1 gi|84490241|ref|YP_448473.1| - 2.2e-06 27.5 0.3 1 9.1 0.0 3.8 3 1 1 4 4 4 2 FAD-NAD(P)-binding NAD_binding_7 PF13241.1 gi|84490241|ref|YP_448473.1| - 2.4e-06 27.7 0.1 0.026 14.7 0.0 2.8 2 0 0 2 2 2 2 Putative NAD(P)-binding Lycopene_cycl PF05834.7 gi|84490241|ref|YP_448473.1| - 3.4e-06 26.2 1.6 0.56 9.0 0.1 3.5 2 2 1 3 3 3 3 Lycopene cyclase protein IlvN PF07991.7 gi|84490241|ref|YP_448473.1| - 0.0017 17.7 1.3 1.4 8.2 0.0 2.8 3 0 0 3 3 2 2 Acetohydroxy acid isomeroreductase, catalytic domain GIDA PF01134.17 gi|84490241|ref|YP_448473.1| - 0.0018 17.2 8.3 0.19 10.5 0.0 4.0 3 1 1 4 4 4 1 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|84490241|ref|YP_448473.1| - 0.004 16.2 3.0 0.11 11.5 0.1 2.6 2 1 1 3 3 3 1 FAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|84490241|ref|YP_448473.1| - 0.0062 15.9 0.8 0.89 8.9 0.0 2.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.13 gi|84490241|ref|YP_448473.1| - 0.0095 15.9 1.9 2.3 8.2 0.1 3.4 3 1 0 3 3 2 1 TrkA-N domain NAD_Gly3P_dh_N PF01210.18 gi|84490241|ref|YP_448473.1| - 0.011 15.4 0.1 3.2 7.4 0.0 2.7 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.19 gi|84490241|ref|YP_448473.1| - 0.013 14.6 0.0 1.3 7.9 0.0 2.3 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Sigma70_r1_1 PF03979.9 gi|84490241|ref|YP_448473.1| - 0.041 13.8 3.7 0.44 10.5 0.0 2.8 2 0 0 2 2 2 0 Sigma-70 factor, region 1.1 3HCDH_N PF02737.13 gi|84490241|ref|YP_448473.1| - 0.045 13.4 0.1 0.045 13.4 0.0 3.4 3 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|84490241|ref|YP_448473.1| - 0.12 12.8 2.2 4.8 7.6 0.4 3.1 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.11 gi|84490241|ref|YP_448473.1| - 0.12 11.7 3.6 2.8 7.3 0.8 2.8 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sigma70_ner PF04546.8 gi|84490241|ref|YP_448473.1| - 0.16 11.5 2.3 0.33 10.5 1.6 1.4 1 0 0 1 1 1 0 Sigma-70, non-essential region Trp_halogenase PF04820.9 gi|84490241|ref|YP_448473.1| - 0.17 10.5 0.1 0.17 10.5 0.1 2.1 2 1 1 3 3 3 0 Tryptophan halogenase Oxidored_nitro PF00148.14 gi|84490242|ref|YP_448474.1| - 1.5e-24 86.4 0.2 2.3e-24 85.8 0.2 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase UDPG_MGDP_dh PF00984.14 gi|84490243|ref|YP_448475.1| - 8.2e-12 45.1 0.5 1.9e-11 43.9 0.3 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|84490243|ref|YP_448475.1| - 1.1e-05 25.5 1.7 1.9e-05 24.7 0.2 2.2 2 1 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh_N PF03721.9 gi|84490243|ref|YP_448475.1| - 0.014 14.7 0.6 0.17 11.2 0.0 2.6 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MMR_HSR1_C PF08438.5 gi|84490244|ref|YP_448476.1| - 1.2e-38 131.6 1.6 2.1e-38 130.9 1.1 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|84490244|ref|YP_448476.1| - 1.5e-18 66.8 0.0 1.3e-17 63.7 0.0 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|84490244|ref|YP_448476.1| - 3.9e-11 42.4 0.5 3.7e-08 32.7 0.0 2.7 3 0 0 3 3 3 2 Ferrous iron transport protein B TGS PF02824.16 gi|84490244|ref|YP_448476.1| - 3.5e-09 36.3 0.0 7.5e-09 35.2 0.0 1.5 1 0 0 1 1 1 1 TGS domain Miro PF08477.8 gi|84490244|ref|YP_448476.1| - 0.051 14.0 0.0 1.4 9.3 0.0 2.6 2 0 0 2 2 2 0 Miro-like protein GTP_EFTU PF00009.22 gi|84490244|ref|YP_448476.1| - 0.061 12.7 0.1 0.23 10.8 0.1 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain TP_methylase PF00590.15 gi|84490245|ref|YP_448477.1| - 4.9e-37 127.6 0.0 5.7e-37 127.4 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CarboxypepD_reg PF13620.1 gi|84490246|ref|YP_448478.1| - 8.9e-51 169.8 124.6 1.7e-09 37.5 0.5 14.2 13 1 1 14 14 14 8 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|84490246|ref|YP_448478.1| - 9.1e-23 80.1 119.4 7.2e-05 22.7 1.5 13.8 14 1 0 14 14 14 8 Domain of unknown function (DUF4480) A2M_N PF01835.14 gi|84490246|ref|YP_448478.1| - 7.2e-10 39.0 24.3 0.53 10.5 0.1 9.9 8 2 2 10 10 10 4 MG2 domain Big_1 PF02369.11 gi|84490246|ref|YP_448478.1| - 3.7e-09 36.3 228.8 0.0014 18.4 4.9 17.8 14 5 4 18 18 18 12 Bacterial Ig-like domain (group 1) Big_3_4 PF13754.1 gi|84490246|ref|YP_448478.1| - 0.0032 17.7 14.4 0.0055 17.0 2.3 17.4 14 4 4 18 18 18 9 Bacterial Ig-like domain (group 3) DUF4178 PF13785.1 gi|84490246|ref|YP_448478.1| - 0.011 15.7 5.3 7.4 6.5 0.0 4.9 5 2 1 6 6 6 0 Domain of unknown function (DUF4178) Peptidase_M50 PF02163.17 gi|84490247|ref|YP_448479.1| - 1.7e-24 85.8 0.2 1.7e-24 85.8 0.1 3.1 3 0 0 3 3 3 1 Peptidase family M50 PDZ_2 PF13180.1 gi|84490247|ref|YP_448479.1| - 3.2e-05 23.7 0.1 7.4e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.19 gi|84490247|ref|YP_448479.1| - 0.03 14.5 0.1 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 PDZ domain (Also known as DHR or GLGF) FAM217 PF15344.1 gi|84490247|ref|YP_448479.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 FAM217 family DctQ PF04290.7 gi|84490247|ref|YP_448479.1| - 0.39 10.4 12.7 1.4 8.7 2.6 3.5 3 1 1 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component AIRS_C PF02769.17 gi|84490248|ref|YP_448480.1| - 1e-49 168.4 0.0 5.1e-28 97.9 0.1 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|84490248|ref|YP_448480.1| - 9.9e-47 157.1 1.6 7.3e-23 80.6 0.1 2.9 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain tRNA-synt_1 PF00133.17 gi|84490249|ref|YP_448481.1| - 3.5e-210 699.0 4.3 4.6e-210 698.6 3.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|84490249|ref|YP_448481.1| - 7.7e-31 106.9 0.2 2.2e-30 105.4 0.2 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|84490249|ref|YP_448481.1| - 2.3e-29 102.2 3.8 6.7e-14 51.3 0.1 3.7 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1f PF01921.13 gi|84490249|ref|YP_448481.1| - 7.7e-10 37.9 0.0 3.3e-06 26.0 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 gi|84490249|ref|YP_448481.1| - 2.9e-07 29.9 0.0 8.6e-07 28.3 0.0 1.8 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|84490249|ref|YP_448481.1| - 0.019 14.2 0.3 0.13 11.5 0.0 2.5 2 1 0 2 2 2 0 Leucyl-tRNA synthetase, Domain 2 FMN_red PF03358.10 gi|84490250|ref|YP_448482.1| - 4e-22 78.3 0.0 5.5e-22 77.9 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|84490250|ref|YP_448482.1| - 6.4e-15 55.1 0.0 7.9e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|84490250|ref|YP_448482.1| - 0.00045 20.2 0.0 0.013 15.4 0.0 2.5 2 1 0 2 2 2 1 Flavodoxin domain AdoMet_Synthase PF01941.14 gi|84490251|ref|YP_448483.1| - 9.1e-178 590.7 6.7 1e-177 590.5 4.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) THP2 PF09432.5 gi|84490251|ref|YP_448483.1| - 0.029 14.2 0.9 1.1 9.1 0.0 2.3 2 0 0 2 2 2 0 Tho complex subunit THP2 DUF3963 PF13124.1 gi|84490251|ref|YP_448483.1| - 0.1 12.3 1.6 2 8.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) DUF192 PF02643.10 gi|84490252|ref|YP_448484.1| - 4.5e-10 39.1 0.0 5.1e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF3010 PF11215.3 gi|84490252|ref|YP_448484.1| - 0.072 13.0 0.5 0.092 12.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) FRD2 PF03197.8 gi|84490252|ref|YP_448484.1| - 0.16 12.5 0.8 0.2 12.2 0.5 1.2 1 0 0 1 1 1 0 Bacteriophage FRD2 protein Metallophos PF00149.23 gi|84490253|ref|YP_448485.1| - 8.1e-10 38.4 1.1 2.1e-09 37.0 0.8 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|84490253|ref|YP_448485.1| - 3.7e-08 33.3 0.1 5.2e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain LYTB PF02401.13 gi|84490253|ref|YP_448485.1| - 0.07 12.0 0.1 0.12 11.2 0.1 1.3 1 0 0 1 1 1 0 LytB protein Miro PF08477.8 gi|84490253|ref|YP_448485.1| - 0.1 13.1 0.1 0.48 10.9 0.0 2.2 2 1 0 2 2 2 0 Miro-like protein Flavoprotein PF02441.14 gi|84490254|ref|YP_448486.1| - 3.5e-24 84.9 1.1 6e-24 84.1 0.7 1.4 1 0 0 1 1 1 1 Flavoprotein Fer4_7 PF12838.2 gi|84490254|ref|YP_448486.1| - 1.1e-07 32.0 5.0 0.00014 22.1 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|84490254|ref|YP_448486.1| - 1.5e-07 30.9 14.7 0.00062 19.5 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|84490254|ref|YP_448486.1| - 7e-07 28.5 15.4 3e-05 23.4 2.2 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84490254|ref|YP_448486.1| - 7.4e-06 26.1 11.2 9.8e-05 22.5 0.8 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84490254|ref|YP_448486.1| - 1.4e-05 25.7 2.4 1.4e-05 25.7 1.7 2.8 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|84490254|ref|YP_448486.1| - 8.7e-05 22.2 16.1 0.022 14.6 2.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|84490254|ref|YP_448486.1| - 0.00011 21.9 18.3 0.00055 19.6 2.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|84490254|ref|YP_448486.1| - 0.00043 20.5 9.6 0.00064 20.0 0.7 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490254|ref|YP_448486.1| - 0.00098 18.9 11.5 0.0061 16.3 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|84490254|ref|YP_448486.1| - 0.0016 18.9 8.9 0.042 14.4 0.2 3.5 2 1 1 3 3 3 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|84490254|ref|YP_448486.1| - 0.0045 17.3 0.8 0.0045 17.3 0.5 3.5 2 1 1 3 3 3 1 4Fe-4S single cluster domain Imm23 PF15593.1 gi|84490254|ref|YP_448486.1| - 0.005 17.0 2.0 0.0076 16.4 0.2 1.9 2 0 0 2 2 2 1 Immunity protein 23 Fer4_4 PF12800.2 gi|84490254|ref|YP_448486.1| - 0.0077 16.4 2.4 0.0077 16.4 1.7 2.7 2 1 0 2 2 1 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|84490254|ref|YP_448486.1| - 0.011 15.6 9.1 0.025 14.4 6.3 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|84490254|ref|YP_448486.1| - 0.041 13.9 2.9 0.041 13.9 2.0 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain MipZ PF09140.6 gi|84490254|ref|YP_448486.1| - 0.044 12.8 0.1 0.063 12.3 0.1 1.2 1 0 0 1 1 1 0 ATPase MipZ Elf1 PF05129.8 gi|84490254|ref|YP_448486.1| - 0.12 12.1 5.9 0.24 11.1 4.1 1.6 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like tRNA_synt_1c_R1 PF04558.10 gi|84490254|ref|YP_448486.1| - 0.15 11.5 2.9 0.32 10.5 2.0 1.6 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 PTS_IIB PF02302.12 gi|84490254|ref|YP_448486.1| - 0.37 11.2 3.0 0.48 10.9 0.3 2.4 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit Fer4_20 PF14691.1 gi|84490254|ref|YP_448486.1| - 0.48 10.0 15.4 0.25 10.9 2.0 2.5 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Cauli_DNA-bind PF03310.8 gi|84490254|ref|YP_448486.1| - 1.1 9.0 8.8 0.1 12.4 0.5 2.7 3 0 0 3 3 3 0 Caulimovirus DNA-binding protein DUF360 PF04020.8 gi|84490255|ref|YP_448487.1| - 6.1e-11 42.6 25.7 1.1e-10 41.7 17.8 1.5 1 0 0 1 1 1 1 Membrane protein of unknown function Phosphodiest PF01663.17 gi|84490255|ref|YP_448487.1| - 1.6e-07 30.9 0.1 6.7e-05 22.3 0.0 2.6 3 0 0 3 3 3 2 Type I phosphodiesterase / nucleotide pyrophosphatase UCR_6-4kD PF08997.5 gi|84490255|ref|YP_448487.1| - 0.03 14.0 0.0 0.1 12.3 0.0 1.8 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein MASE2 PF05230.6 gi|84490255|ref|YP_448487.1| - 0.45 10.5 5.9 1.5 8.8 3.9 1.9 1 1 0 1 1 1 0 MASE2 domain SHMT PF00464.14 gi|84490256|ref|YP_448488.1| - 1.7e-82 276.9 0.1 2.2e-82 276.5 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.16 gi|84490256|ref|YP_448488.1| - 4.5e-11 42.3 0.0 1.2e-10 40.9 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|84490256|ref|YP_448488.1| - 6.2e-08 32.1 0.1 9.2e-08 31.5 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase SelA PF03841.8 gi|84490256|ref|YP_448488.1| - 6.8e-06 25.0 0.0 2.8e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.14 gi|84490256|ref|YP_448488.1| - 7.8e-06 24.8 0.1 1e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|84490256|ref|YP_448488.1| - 0.00025 20.2 0.2 0.0004 19.5 0.1 1.5 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|84490256|ref|YP_448488.1| - 0.049 11.9 0.1 0.11 10.6 0.0 1.7 1 1 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme GDC-P PF02347.11 gi|84490256|ref|YP_448488.1| - 0.15 10.6 3.0 0.96 8.0 1.8 2.4 1 1 1 2 2 2 0 Glycine cleavage system P-protein Fer4 PF00037.22 gi|84490257|ref|YP_448489.1| - 1e-19 69.2 40.1 8.2e-06 25.2 2.9 4.9 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.2 gi|84490257|ref|YP_448489.1| - 6.3e-15 55.2 34.1 5.5e-07 29.8 9.7 4.5 4 0 0 4 4 4 3 4Fe-4S dicluster domain Pyr_redox_2 PF07992.9 gi|84490257|ref|YP_448489.1| - 5.7e-14 52.4 2.0 4e-11 43.1 0.4 3.0 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_16 PF13484.1 gi|84490257|ref|YP_448489.1| - 1.8e-11 44.5 31.6 0.0038 17.9 0.1 5.1 6 0 0 6 6 4 4 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|84490257|ref|YP_448489.1| - 4.2e-11 42.4 36.3 2.7e-05 23.8 8.6 4.4 5 0 0 5 5 4 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490257|ref|YP_448489.1| - 4e-10 39.3 42.2 0.00025 20.8 0.4 5.5 5 1 2 7 7 5 5 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|84490257|ref|YP_448489.1| - 3.6e-09 35.9 42.4 0.0021 17.8 2.4 5.4 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_6 PF12837.2 gi|84490257|ref|YP_448489.1| - 1.3e-08 34.2 50.2 8.3e-05 22.2 2.7 5.6 6 0 0 6 6 4 4 4Fe-4S binding domain Fer4_15 PF13459.1 gi|84490257|ref|YP_448489.1| - 5.4e-08 33.2 30.2 0.0014 19.1 0.5 4.9 3 1 1 4 4 4 4 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|84490257|ref|YP_448489.1| - 5.6e-08 32.9 39.5 8.3e-05 22.7 7.9 4.1 3 1 0 3 3 2 2 4Fe-4S dicluster domain DAO PF01266.19 gi|84490257|ref|YP_448489.1| - 2e-06 26.9 0.0 0.0027 16.6 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_8 PF13183.1 gi|84490257|ref|YP_448489.1| - 1.3e-05 25.1 35.3 0.00054 19.9 7.2 4.7 3 2 4 7 7 7 5 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|84490257|ref|YP_448489.1| - 1.3e-05 25.4 36.1 0.0048 17.2 0.8 5.1 5 0 0 5 5 4 3 4Fe-4S dicluster domain Pyr_redox PF00070.22 gi|84490257|ref|YP_448489.1| - 1.9e-05 24.9 0.0 0.0017 18.7 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_17 PF13534.1 gi|84490257|ref|YP_448489.1| - 2.1e-05 24.7 32.6 0.0032 17.7 5.7 5.1 3 2 3 6 6 6 5 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|84490257|ref|YP_448489.1| - 0.0001 22.3 38.8 0.0099 16.1 1.0 5.8 5 0 0 5 5 5 2 4Fe-4S binding domain GIDA PF01134.17 gi|84490257|ref|YP_448489.1| - 0.00076 18.4 0.0 0.0019 17.1 0.0 1.6 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.2 gi|84490257|ref|YP_448489.1| - 0.002 17.2 0.2 0.0034 16.5 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.16 gi|84490257|ref|YP_448489.1| - 0.0022 17.5 0.1 0.027 14.0 0.0 2.2 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.1 gi|84490257|ref|YP_448489.1| - 0.0045 16.9 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Fer4_13 PF13370.1 gi|84490257|ref|YP_448489.1| - 0.017 15.5 35.5 0.024 15.0 0.9 4.9 5 0 0 5 5 4 0 4Fe-4S single cluster domain FAD_binding_2 PF00890.19 gi|84490257|ref|YP_448489.1| - 0.025 13.4 0.0 0.037 12.8 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.14 gi|84490257|ref|YP_448489.1| - 0.032 13.2 0.1 0.052 12.5 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain Pyr_redox_3 PF13738.1 gi|84490257|ref|YP_448489.1| - 0.041 13.9 0.0 0.19 11.7 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Fer4_11 PF13247.1 gi|84490257|ref|YP_448489.1| - 0.19 11.6 21.4 0.69 9.8 2.6 4.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain HI0933_like PF03486.9 gi|84490257|ref|YP_448489.1| - 0.21 9.9 0.3 0.44 8.9 0.1 1.5 2 0 0 2 2 2 0 HI0933-like protein Fer4_3 PF12798.2 gi|84490257|ref|YP_448489.1| - 7 7.4 60.2 0.18 12.4 5.7 6.3 6 0 0 6 6 5 0 4Fe-4S binding domain Mem_trans PF03547.13 gi|84490258|ref|YP_448490.1| - 2e-41 141.5 31.1 1.8e-23 82.4 6.1 2.0 1 1 1 2 2 2 2 Membrane transport protein DUF2892 PF11127.3 gi|84490258|ref|YP_448490.1| - 7.8 6.4 8.6 0.22 11.3 0.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2892) OrfB_IS605 PF01385.14 gi|84490259|ref|YP_448491.1| - 2.1e-23 82.9 10.1 4e-23 81.9 7.0 1.5 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|84490259|ref|YP_448491.1| - 1.3e-16 59.9 1.3 1.3e-16 59.9 0.9 2.2 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.3 gi|84490259|ref|YP_448491.1| - 7.3e-07 28.4 4.3 7.3e-07 28.4 3.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HypA PF01155.14 gi|84490259|ref|YP_448491.1| - 0.11 12.1 0.4 0.24 11.1 0.1 1.7 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Sp100 PF03172.8 gi|84490259|ref|YP_448491.1| - 0.22 11.4 5.9 0.72 9.8 1.2 2.8 3 0 0 3 3 3 0 Sp100 domain zf-ribbon_3 PF13248.1 gi|84490259|ref|YP_448491.1| - 0.23 10.7 2.3 7 5.9 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain VD10_N PF08476.5 gi|84490259|ref|YP_448491.1| - 0.5 9.8 7.0 0.22 11.0 1.6 2.9 3 0 0 3 3 3 0 Viral D10 N-terminal zf-RanBP PF00641.13 gi|84490259|ref|YP_448491.1| - 0.7 9.0 6.4 0.53 9.4 0.3 2.6 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.10 gi|84490259|ref|YP_448491.1| - 0.73 9.4 5.0 1.3 8.6 2.8 1.9 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger UbiD PF01977.11 gi|84490260|ref|YP_448492.1| - 1.3e-121 405.9 0.2 1.6e-121 405.6 0.1 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Peptidase_C31 PF05410.8 gi|84490260|ref|YP_448492.1| - 0.1 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha AIRC PF00731.15 gi|84490261|ref|YP_448493.1| - 1.1e-85 284.3 1.8 1.9e-48 163.5 0.1 2.0 2 0 0 2 2 2 2 AIR carboxylase Glycos_transf_2 PF00535.21 gi|84490262|ref|YP_448494.1| - 9.8e-27 93.6 0.1 2.1e-26 92.6 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|84490262|ref|YP_448494.1| - 4.4e-07 29.9 0.1 7.3e-07 29.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|84490262|ref|YP_448494.1| - 3.4e-06 26.3 3.0 8.1e-06 25.1 2.1 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 CDC48_N PF02359.13 gi|84490262|ref|YP_448494.1| - 0.0018 18.1 0.0 0.0076 16.1 0.0 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain Glyco_tranf_2_4 PF13704.1 gi|84490262|ref|YP_448494.1| - 0.0066 16.7 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF2976 PF11190.3 gi|84490262|ref|YP_448494.1| - 0.01 15.3 6.9 0.037 13.5 4.8 2.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2976) DUF1743 PF08489.6 gi|84490263|ref|YP_448495.1| - 1.9e-26 92.1 4.6 9.8e-26 89.8 0.6 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF1743) Ras PF00071.17 gi|84490263|ref|YP_448495.1| - 0.1 11.9 2.0 0.17 11.2 1.4 1.5 1 1 0 1 1 1 0 Ras family DMRL_synthase PF00885.14 gi|84490264|ref|YP_448496.1| - 2.1e-37 127.9 0.3 2.3e-37 127.8 0.2 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Iso_dh PF00180.15 gi|84490265|ref|YP_448497.1| - 1.5e-102 343.1 0.1 1.7e-102 342.9 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Sulfolobus_pRN PF05584.6 gi|84490265|ref|YP_448497.1| - 0.14 12.1 0.0 1.7 8.6 0.0 2.2 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein Aconitase_C PF00694.14 gi|84490266|ref|YP_448498.1| - 1.3e-22 80.3 0.1 2.3e-22 79.4 0.0 1.5 2 0 0 2 2 2 1 Aconitase C-terminal domain Aconitase PF00330.15 gi|84490267|ref|YP_448499.1| - 8.1e-89 298.2 5.2 3e-57 194.1 2.1 2.1 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|84490267|ref|YP_448499.1| - 0.00068 18.2 0.0 0.0011 17.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) tRNA_anti-codon PF01336.20 gi|84490268|ref|YP_448500.1| - 1.1e-40 137.3 29.9 3.6e-12 45.9 0.5 7.0 6 1 0 7 7 7 6 OB-fold nucleic acid binding domain Rep_fac-A_C PF08646.5 gi|84490268|ref|YP_448500.1| - 6.6e-24 84.2 11.9 1.7e-19 70.0 0.5 6.5 7 0 0 7 7 7 3 Replication factor-A C terminal domain zinc-ribbons_6 PF07191.7 gi|84490268|ref|YP_448500.1| - 0.00078 19.1 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 zinc-ribbons TF_Zn_Ribbon PF08271.7 gi|84490268|ref|YP_448500.1| - 0.011 15.0 4.1 0.03 13.6 2.8 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding PBP-Tp47_a PF14889.1 gi|84490268|ref|YP_448500.1| - 0.065 12.5 1.6 6.3 6.0 0.0 3.5 3 0 0 3 3 3 0 Penicillin-binding protein Tp47 domain a DUF4428 PF14471.1 gi|84490268|ref|YP_448500.1| - 1.8 8.3 6.7 0.34 10.7 0.5 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4428) Psb28 PF03912.9 gi|84490268|ref|YP_448500.1| - 4.3 7.3 16.0 1.2 9.1 0.1 5.6 6 0 0 6 6 6 0 Psb28 protein Rad51 PF08423.6 gi|84490269|ref|YP_448501.1| - 9.3e-95 316.3 0.3 1.2e-94 316.0 0.2 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.16 gi|84490269|ref|YP_448501.1| - 4.9e-15 55.4 0.6 6.6e-15 54.9 0.4 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein KaiC PF06745.8 gi|84490269|ref|YP_448501.1| - 1.3e-13 50.5 0.7 2.2e-13 49.8 0.5 1.3 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|84490269|ref|YP_448501.1| - 1.3e-10 41.0 0.0 2.1e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain HHH_5 PF14520.1 gi|84490269|ref|YP_448501.1| - 4.9e-07 29.8 1.0 1.5e-06 28.2 0.5 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|84490269|ref|YP_448501.1| - 3.1e-06 26.9 0.4 1.1e-05 25.2 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif AAA_22 PF13401.1 gi|84490269|ref|YP_448501.1| - 4.2e-05 23.7 0.1 7.5e-05 22.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain Cdd1 PF11731.3 gi|84490269|ref|YP_448501.1| - 4.5e-05 23.2 0.0 0.00011 22.1 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus HHH PF00633.18 gi|84490269|ref|YP_448501.1| - 0.017 14.8 2.3 0.085 12.6 0.0 3.1 3 0 0 3 3 3 0 Helix-hairpin-helix motif IMS_HHH PF11798.3 gi|84490269|ref|YP_448501.1| - 0.033 14.2 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 IMS family HHH motif Na_H_Exchanger PF00999.16 gi|84490270|ref|YP_448502.1| - 6.2e-35 120.4 47.3 8e-35 120.0 32.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TMEM141 PF15110.1 gi|84490270|ref|YP_448502.1| - 0.14 12.5 1.1 0.59 10.4 0.2 2.6 2 0 0 2 2 2 0 TMEM141 protein family Coat_F PF07875.7 gi|84490271|ref|YP_448503.1| - 0.036 14.1 0.2 0.095 12.8 0.0 1.8 2 0 0 2 2 2 0 Coat F domain PHP_C PF13263.1 gi|84490272|ref|YP_448504.1| - 2e-14 52.8 0.0 4.4e-14 51.7 0.0 1.6 2 0 0 2 2 2 1 PHP-associated PHP PF02811.14 gi|84490272|ref|YP_448504.1| - 6.1e-14 52.1 0.5 1.4e-13 50.9 0.4 1.7 1 1 0 1 1 1 1 PHP domain AIRC PF00731.15 gi|84490273|ref|YP_448505.1| - 3.3e-23 81.6 1.0 5.9e-23 80.8 0.7 1.4 1 0 0 1 1 1 1 AIR carboxylase UPF0261 PF06792.6 gi|84490273|ref|YP_448505.1| - 0.034 12.6 0.0 0.051 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Patatin PF01734.17 gi|84490273|ref|YP_448505.1| - 0.15 11.9 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Patatin-like phospholipase Phasin PF05597.6 gi|84490274|ref|YP_448506.1| - 0.011 15.4 2.7 0.011 15.4 1.9 2.1 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Matrilin_ccoil PF10393.4 gi|84490274|ref|YP_448506.1| - 0.051 12.9 0.4 0.18 11.1 0.2 2.0 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin MutS_IV PF05190.13 gi|84490274|ref|YP_448506.1| - 0.092 12.9 7.5 0.22 11.7 0.1 2.9 2 2 0 2 2 2 0 MutS family domain IV DUF4446 PF14584.1 gi|84490274|ref|YP_448506.1| - 0.11 12.3 6.6 0.32 10.8 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) UPF0118 PF01594.11 gi|84490274|ref|YP_448506.1| - 0.12 11.3 2.9 0.044 12.7 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function DUF20 Baculo_PEP_C PF04513.7 gi|84490274|ref|YP_448506.1| - 0.16 11.8 2.8 8.8 6.1 1.9 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus hSac2 PF12456.3 gi|84490274|ref|YP_448506.1| - 0.22 10.8 4.2 14 5.1 2.9 2.3 1 1 0 1 1 1 0 Inositol phosphatase Allexi_40kDa PF05549.6 gi|84490274|ref|YP_448506.1| - 0.26 10.5 6.3 1.8 7.7 1.0 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein FAM163 PF15069.1 gi|84490274|ref|YP_448506.1| - 0.3 11.6 3.9 0.48 10.9 2.7 1.4 1 1 0 1 1 1 0 FAM163 family IncA PF04156.9 gi|84490274|ref|YP_448506.1| - 0.44 10.1 11.4 1.1 8.8 7.9 1.6 1 1 0 1 1 1 0 IncA protein DUF948 PF06103.6 gi|84490274|ref|YP_448506.1| - 0.64 9.9 9.3 3.4 7.6 1.1 2.6 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) PIG-P PF08510.7 gi|84490274|ref|YP_448506.1| - 0.72 9.4 3.0 2.4 7.7 2.1 1.9 1 1 0 1 1 1 0 PIG-P Tetraspannin PF00335.15 gi|84490274|ref|YP_448506.1| - 1 8.5 5.3 6 6.0 3.7 1.9 1 1 0 1 1 1 0 Tetraspanin family AAA_23 PF13476.1 gi|84490274|ref|YP_448506.1| - 1.2 9.4 12.0 1.5 9.0 8.3 1.2 1 0 0 1 1 1 0 AAA domain YgaB PF14182.1 gi|84490274|ref|YP_448506.1| - 1.2 9.4 8.3 1.4 9.2 1.1 2.5 1 1 1 2 2 2 0 YgaB-like protein NPV_P10 PF05531.7 gi|84490274|ref|YP_448506.1| - 1.3 9.3 6.8 0.92 9.8 1.1 2.7 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein ABC2_membrane_3 PF12698.2 gi|84490274|ref|YP_448506.1| - 1.3 7.9 6.0 1.8 7.5 4.1 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Endotoxin_N PF03945.9 gi|84490274|ref|YP_448506.1| - 1.9 7.8 8.8 0.74 9.1 3.2 1.9 1 1 1 2 2 2 0 delta endotoxin, N-terminal domain BLOC1_2 PF10046.4 gi|84490274|ref|YP_448506.1| - 2 8.6 9.9 1.1 9.3 3.6 2.5 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 V-SNARE PF05008.10 gi|84490274|ref|YP_448506.1| - 3.4 7.8 7.0 0.57 10.3 1.3 2.2 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Osmo_CC PF08946.5 gi|84490274|ref|YP_448506.1| - 4 7.5 13.8 0.61 10.1 0.4 4.0 3 1 0 4 4 4 0 Osmosensory transporter coiled coil DUF16 PF01519.11 gi|84490274|ref|YP_448506.1| - 6.6 7.0 14.1 1.5e+02 2.6 9.7 2.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Fib_alpha PF08702.5 gi|84490274|ref|YP_448506.1| - 8.4 6.5 8.7 0.87 9.6 0.6 2.3 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family PDR_CDR PF06422.7 gi|84490275|ref|YP_448507.1| - 0.039 13.6 0.4 0.11 12.1 0.1 1.7 2 0 0 2 2 2 0 CDR ABC transporter SID-1_RNA_chan PF13965.1 gi|84490275|ref|YP_448507.1| - 0.043 11.9 2.3 0.045 11.9 1.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Neur_chan_memb PF02932.11 gi|84490275|ref|YP_448507.1| - 0.12 12.2 0.2 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HBS1_N PF08938.5 gi|84490275|ref|YP_448507.1| - 0.15 12.2 3.6 0.48 10.5 2.4 1.9 1 1 0 1 1 1 0 HBS1 N-terminus MUG2_C PF08593.5 gi|84490275|ref|YP_448507.1| - 0.22 11.7 2.2 4.6 7.5 0.1 2.3 1 1 1 2 2 2 0 Meiotically up-regulated glycoproteins C-terminal Nbl1_Borealin_N PF10444.4 gi|84490275|ref|YP_448507.1| - 0.44 9.9 5.6 5.6 6.4 0.3 2.8 1 1 1 2 2 2 0 Nbl1 / Borealin N terminal ETRAMP PF09716.5 gi|84490275|ref|YP_448507.1| - 0.49 10.3 5.7 1 9.3 0.4 2.2 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DUF4446 PF14584.1 gi|84490275|ref|YP_448507.1| - 1.8 8.3 11.6 0.071 12.9 2.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) NPV_P10 PF05531.7 gi|84490275|ref|YP_448507.1| - 1.9 8.8 5.5 0.51 10.6 1.7 1.6 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein AAA_23 PF13476.1 gi|84490275|ref|YP_448507.1| - 2 8.6 17.1 2.2 8.5 11.9 1.1 1 0 0 1 1 1 0 AAA domain DUF843 PF05814.6 gi|84490275|ref|YP_448507.1| - 2.6 7.8 8.0 0.14 11.9 0.9 2.1 2 0 0 2 2 2 0 Baculovirus protein of unknown function (DUF843) DUF2393 PF09624.5 gi|84490275|ref|YP_448507.1| - 4.3 6.8 7.4 0.62 9.5 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2393) Peptidase_S49_N PF08496.5 gi|84490275|ref|YP_448507.1| - 4.4 7.0 12.6 4.6 7.0 2.8 2.1 1 1 1 2 2 2 0 Peptidase family S49 N-terminal DUF2681 PF10883.3 gi|84490275|ref|YP_448507.1| - 9 6.5 15.0 0.35 11.1 1.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) Peptidase_M24 PF00557.19 gi|84490276|ref|YP_448508.1| - 1.7e-42 145.3 0.0 5.7e-42 143.6 0.0 1.7 1 1 0 1 1 1 1 Metallopeptidase family M24 Sua5_yciO_yrdC PF01300.13 gi|84490277|ref|YP_448509.1| - 2.3e-47 160.5 0.0 4.3e-47 159.6 0.0 1.5 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.7 gi|84490277|ref|YP_448509.1| - 4e-29 99.7 17.8 7.7e-15 54.0 2.1 2.5 2 0 0 2 2 2 2 HypF finger Acylphosphatase PF00708.13 gi|84490277|ref|YP_448509.1| - 2.6e-21 75.5 0.1 6e-21 74.3 0.1 1.7 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.20 gi|84490277|ref|YP_448509.1| - 5.5e-08 32.6 1.5 0.00019 21.0 0.1 2.3 2 0 0 2 2 2 2 Glycoprotease family Zn-ribbon_8 PF09723.5 gi|84490277|ref|YP_448509.1| - 0.91 9.5 5.5 8.7 6.3 2.1 2.9 2 0 0 2 2 2 0 Zinc ribbon domain Fae PF08714.6 gi|84490278|ref|YP_448510.1| - 5.3e-69 230.9 0.5 1e-68 230.0 0.1 1.7 2 0 0 2 2 2 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.19 gi|84490278|ref|YP_448510.1| - 2.6e-24 85.8 0.1 4.1e-24 85.2 0.1 1.3 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.14 gi|84490278|ref|YP_448510.1| - 0.0013 17.8 0.1 0.0028 16.8 0.1 1.5 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.12 gi|84490278|ref|YP_448510.1| - 0.017 14.3 1.6 1 8.5 0.1 2.3 2 0 0 2 2 2 0 PcrB family DNA_binding_1 PF01035.15 gi|84490279|ref|YP_448511.1| - 5.7e-26 90.0 0.0 8.6e-26 89.5 0.0 1.3 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain BofA PF07441.6 gi|84490280|ref|YP_448512.1| - 1.4e-09 37.8 25.6 1.8e-09 37.4 17.7 1.2 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Carb_kinase PF01256.12 gi|84490281|ref|YP_448513.1| - 4.7e-47 160.2 0.0 6.3e-47 159.8 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|84490281|ref|YP_448513.1| - 5.1e-44 149.8 0.0 9.5e-44 148.9 0.0 1.5 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.10 gi|84490281|ref|YP_448513.1| - 0.0081 15.3 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 gi|84490281|ref|YP_448513.1| - 0.009 15.2 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase KR PF08659.5 gi|84490281|ref|YP_448513.1| - 0.054 13.1 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 KR domain Toprim PF01751.17 gi|84490281|ref|YP_448513.1| - 0.076 13.0 0.4 1.2 9.1 0.3 2.6 1 1 0 1 1 1 0 Toprim domain FTR_C PF02741.10 gi|84490282|ref|YP_448514.1| - 7.4e-66 220.5 2.1 7.4e-66 220.5 1.4 1.7 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.13 gi|84490282|ref|YP_448514.1| - 5.1e-57 191.6 0.5 4.1e-56 188.6 0.0 2.1 2 0 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase UPF0104 PF03706.8 gi|84490283|ref|YP_448515.1| - 1.9e-45 155.3 38.6 2.4e-45 155.0 26.7 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Dr_adhesin PF12393.3 gi|84490283|ref|YP_448515.1| - 6.2 7.0 7.4 23 5.2 0.4 3.7 2 0 0 2 2 2 0 Dr family adhesin TrkA_N PF02254.13 gi|84490284|ref|YP_448516.1| - 1.4e-28 99.2 2.0 1.4e-28 99.2 1.4 2.1 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.16 gi|84490284|ref|YP_448516.1| - 2.6e-09 36.5 0.9 2.1e-08 33.6 0.0 2.4 2 1 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|84490284|ref|YP_448516.1| - 9.3e-07 29.0 2.3 1.1e-06 28.8 0.1 2.1 2 1 0 2 2 2 1 Putative NAD(P)-binding Semialdhyde_dh PF01118.19 gi|84490284|ref|YP_448516.1| - 2.7e-05 24.4 0.5 0.0013 19.0 0.0 2.2 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|84490284|ref|YP_448516.1| - 2.9e-05 23.2 0.5 4e-05 22.7 0.3 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase DapB_N PF01113.15 gi|84490284|ref|YP_448516.1| - 3.6e-05 23.6 2.2 0.013 15.4 0.1 2.2 2 0 0 2 2 2 2 Dihydrodipicolinate reductase, N-terminus Methyltransf_31 PF13847.1 gi|84490284|ref|YP_448516.1| - 0.0022 17.6 2.0 0.0048 16.5 1.4 1.8 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84490284|ref|YP_448516.1| - 0.01 15.2 0.1 0.023 14.1 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Pyr_redox_3 PF13738.1 gi|84490284|ref|YP_448516.1| - 0.019 15.0 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_25 PF13649.1 gi|84490284|ref|YP_448516.1| - 0.024 15.0 0.0 0.06 13.7 0.0 1.7 2 1 0 2 2 2 0 Methyltransferase domain XdhC_C PF13478.1 gi|84490284|ref|YP_448516.1| - 0.058 13.6 0.0 0.12 12.7 0.0 1.6 2 0 0 2 2 2 0 XdhC Rossmann domain Pyr_redox PF00070.22 gi|84490284|ref|YP_448516.1| - 0.068 13.5 1.0 0.18 12.2 0.1 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.15 gi|84490284|ref|YP_448516.1| - 0.12 12.4 2.7 0.061 13.4 0.4 1.7 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Pyr_redox_2 PF07992.9 gi|84490284|ref|YP_448516.1| - 0.15 11.9 0.9 0.18 11.6 0.6 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lactamase_B PF00753.22 gi|84490285|ref|YP_448517.1| - 1.2e-21 77.2 1.6 2.6e-21 76.1 1.1 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|84490285|ref|YP_448517.1| - 3.3e-05 23.5 0.1 4.4e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Acetyltransf_7 PF13508.1 gi|84490286|ref|YP_448518.1| - 3.1e-13 49.6 0.0 6.6e-13 48.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|84490286|ref|YP_448518.1| - 3.6e-12 46.1 0.0 6.8e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|84490286|ref|YP_448518.1| - 8.5e-07 29.0 0.0 1.3e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|84490286|ref|YP_448518.1| - 1.7e-06 27.6 0.0 5.3e-06 26.0 0.0 1.7 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|84490286|ref|YP_448518.1| - 0.0034 17.2 0.0 0.0043 16.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|84490286|ref|YP_448518.1| - 0.014 15.1 0.0 0.028 14.2 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|84490286|ref|YP_448518.1| - 0.021 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF3749 PF12568.3 gi|84490286|ref|YP_448518.1| - 0.064 12.8 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.1 gi|84490286|ref|YP_448518.1| - 0.14 11.8 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase DNA_pol_B PF00136.16 gi|84490287|ref|YP_448519.1| - 4.6e-48 164.1 0.1 7.7e-48 163.4 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|84490287|ref|YP_448519.1| - 2.6e-44 151.3 5.1 5e-44 150.4 3.6 1.4 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.4 gi|84490287|ref|YP_448519.1| - 3.7e-13 49.5 0.1 6.4e-13 48.7 0.1 1.3 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.1 gi|84490287|ref|YP_448519.1| - 1e-11 44.8 3.3 1.1e-11 44.8 0.4 2.5 3 1 0 3 3 3 1 RNase_H superfamily DNA_pol_A_exo1 PF01612.15 gi|84490287|ref|YP_448519.1| - 0.067 12.6 0.9 0.26 10.7 0.2 2.4 2 1 0 2 2 2 0 3'-5' exonuclease GbpC PF08363.5 gi|84490288|ref|YP_448520.1| - 0.03 13.5 4.9 0.028 13.6 2.3 1.6 1 1 1 2 2 2 0 Glucan-binding protein C LicD PF04991.8 gi|84490288|ref|YP_448520.1| - 0.044 13.8 1.0 0.048 13.7 0.7 1.1 1 0 0 1 1 1 0 LicD family DUF3464 PF11947.3 gi|84490288|ref|YP_448520.1| - 0.13 11.7 0.6 0.56 9.6 0.0 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3464) DUF4179 PF13786.1 gi|84490288|ref|YP_448520.1| - 2.8 8.2 8.4 0.88 9.8 2.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4179) NTP_transferase PF00483.18 gi|84490289|ref|YP_448521.1| - 5.2e-27 94.7 0.0 8.2e-27 94.0 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|84490289|ref|YP_448521.1| - 2.6e-09 37.3 0.0 3.7e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Cupin_2 PF07883.6 gi|84490289|ref|YP_448521.1| - 4.9e-09 35.5 0.2 1e-08 34.5 0.2 1.5 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.13 gi|84490289|ref|YP_448521.1| - 3e-07 30.1 0.2 4.7e-07 29.5 0.1 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.7 gi|84490289|ref|YP_448521.1| - 0.00067 19.5 0.2 0.001 19.0 0.2 1.2 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.7 gi|84490289|ref|YP_448521.1| - 0.0023 17.2 0.0 0.005 16.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF861) DUF1947 PF09183.5 gi|84490289|ref|YP_448521.1| - 0.0053 16.4 0.6 0.044 13.5 0.0 2.6 3 0 0 3 3 3 1 Domain of unknown function (DUF1947) Cupin_1 PF00190.17 gi|84490289|ref|YP_448521.1| - 0.0064 15.9 0.0 0.014 14.8 0.0 1.7 1 0 0 1 1 1 1 Cupin GATase PF00117.23 gi|84490290|ref|YP_448522.1| - 4.3e-22 78.5 0.0 4.9e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.14 gi|84490290|ref|YP_448522.1| - 0.0002 21.0 0.0 0.3 10.6 0.0 2.0 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|84490290|ref|YP_448522.1| - 0.00061 19.2 0.0 0.001 18.5 0.0 1.3 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|84490290|ref|YP_448522.1| - 0.006 16.1 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.17 gi|84490291|ref|YP_448523.1| - 4.2e-16 59.3 0.0 7.5e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|84490291|ref|YP_448523.1| - 1.4e-09 38.0 0.1 2.5e-09 37.2 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Hormone_1 PF00103.15 gi|84490292|ref|YP_448524.1| - 0.022 14.1 0.4 0.027 13.7 0.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family 2OG-Fe_Oxy_2 PF10014.4 gi|84490292|ref|YP_448524.1| - 0.11 11.8 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase CDP-OH_P_transf PF01066.16 gi|84490293|ref|YP_448525.1| - 5.2e-16 58.7 5.1 5.2e-16 58.7 3.5 2.1 2 0 0 2 2 2 1 CDP-alcohol phosphatidyltransferase HycI PF01750.13 gi|84490294|ref|YP_448526.1| - 2e-24 85.6 0.0 2.5e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease CTDII PF01556.13 gi|84490296|ref|YP_448528.1| - 7.3e-33 112.3 0.5 1.5e-23 82.4 0.0 2.4 2 0 0 2 2 2 2 DnaJ C terminal domain DnaJ PF00226.26 gi|84490296|ref|YP_448528.1| - 5.2e-28 96.5 3.6 8.8e-28 95.8 2.5 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|84490296|ref|YP_448528.1| - 5.6e-16 58.3 17.3 1e-15 57.5 12.0 1.4 1 0 0 1 1 1 1 DnaJ central domain Lar_restr_allev PF14354.1 gi|84490296|ref|YP_448528.1| - 1.8 8.9 9.3 4.2 7.7 3.6 2.7 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-C4_Topoisom PF01396.14 gi|84490296|ref|YP_448528.1| - 4.3 6.9 15.0 13 5.4 0.5 3.5 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger DZR PF12773.2 gi|84490296|ref|YP_448528.1| - 7.5 6.4 16.9 70 3.3 11.8 2.2 1 1 0 1 1 1 0 Double zinc ribbon HSP70 PF00012.15 gi|84490297|ref|YP_448529.1| - 9.5e-225 747.0 18.3 1.5e-203 677.0 11.1 2.1 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|84490297|ref|YP_448529.1| - 1.8e-18 66.2 1.6 1.8e-18 66.2 1.1 2.6 2 2 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.11 gi|84490297|ref|YP_448529.1| - 0.0062 16.1 0.0 0.014 15.0 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Hydantoinase_A PF01968.13 gi|84490297|ref|YP_448529.1| - 0.22 10.5 10.0 1.1 8.3 0.1 4.1 3 2 1 4 4 4 0 Hydantoinase/oxoprolinase GrpE PF01025.14 gi|84490298|ref|YP_448530.1| - 9.2e-47 158.6 19.1 1.1e-46 158.3 13.3 1.1 1 0 0 1 1 1 1 GrpE Kri1 PF05178.7 gi|84490298|ref|YP_448530.1| - 0.26 11.5 24.5 0.029 14.6 2.5 2.4 2 1 0 2 2 2 0 KRI1-like family EAP30 PF04157.11 gi|84490298|ref|YP_448530.1| - 1 8.4 8.6 1.7 7.7 6.0 1.5 1 1 0 1 1 1 0 EAP30/Vps36 family LUC7 PF03194.10 gi|84490298|ref|YP_448530.1| - 3.6 7.0 16.8 4.4 6.7 11.6 1.1 1 0 0 1 1 1 0 LUC7 N_terminus DUF2852 PF11014.3 gi|84490298|ref|YP_448530.1| - 9.8 6.1 12.9 31 4.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2852) HTH_5 PF01022.15 gi|84490299|ref|YP_448531.1| - 1.9e-11 43.4 0.0 4.6e-11 42.1 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|84490299|ref|YP_448531.1| - 1.1e-07 31.5 0.0 1.8e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain PadR PF03551.9 gi|84490299|ref|YP_448531.1| - 7.1e-06 25.7 0.1 4e-05 23.2 0.1 2.1 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|84490299|ref|YP_448531.1| - 0.00017 21.2 0.0 0.00035 20.2 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|84490299|ref|YP_448531.1| - 0.00071 18.9 0.3 0.0041 16.4 0.2 2.1 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|84490299|ref|YP_448531.1| - 0.01 15.4 0.1 0.025 14.1 0.0 1.8 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.2 gi|84490299|ref|YP_448531.1| - 0.022 14.4 0.0 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 MarR family HxlR PF01638.12 gi|84490299|ref|YP_448531.1| - 0.058 13.0 0.0 0.094 12.3 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_12 PF08461.5 gi|84490299|ref|YP_448531.1| - 0.076 12.7 0.1 0.34 10.6 0.0 2.2 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_27 PF13463.1 gi|84490299|ref|YP_448531.1| - 0.13 12.5 0.0 0.39 11.0 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain Med15 PF09606.5 gi|84490300|ref|YP_448532.1| - 0.015 13.5 27.7 0.02 13.1 19.2 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal Hid1 PF12722.2 gi|84490300|ref|YP_448532.1| - 0.23 9.1 8.6 0.27 8.8 5.9 1.3 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein PMSI1 PF15322.1 gi|84490300|ref|YP_448532.1| - 0.32 10.0 7.3 0.48 9.4 5.1 1.2 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Menin PF05053.8 gi|84490300|ref|YP_448532.1| - 0.46 8.6 13.0 0.53 8.3 9.0 1.1 1 0 0 1 1 1 0 Menin TFIIA PF03153.8 gi|84490300|ref|YP_448532.1| - 1.3 8.8 20.6 1.5 8.6 14.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF4551 PF15087.1 gi|84490300|ref|YP_448532.1| - 2.7 6.2 12.8 3.4 5.9 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) DUF605 PF04652.11 gi|84490300|ref|YP_448532.1| - 4.6 6.5 32.7 6.3 6.0 22.7 1.2 1 0 0 1 1 1 0 Vta1 like PHP PF02811.14 gi|84490301|ref|YP_448533.1| - 4.5e-06 26.5 0.1 1.9e-05 24.5 0.0 2.0 2 0 0 2 2 2 1 PHP domain PHP_C PF13263.1 gi|84490301|ref|YP_448533.1| - 0.11 12.0 0.0 0.23 10.9 0.0 1.6 1 0 0 1 1 1 0 PHP-associated PAC2 PF09754.4 gi|84490302|ref|YP_448534.1| - 4.4e-46 157.4 0.0 5.3e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.7 gi|84490303|ref|YP_448535.1| - 6.7e-26 89.7 1.9 7.2e-26 89.6 1.3 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family DUF1272 PF06906.6 gi|84490303|ref|YP_448535.1| - 0.013 15.2 1.4 0.017 14.9 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) TF_Zn_Ribbon PF08271.7 gi|84490303|ref|YP_448535.1| - 0.021 14.1 3.9 1.1 8.6 0.1 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding PolC_DP2 PF03833.8 gi|84490303|ref|YP_448535.1| - 0.021 12.4 0.4 0.018 12.7 0.3 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DZR PF12773.2 gi|84490303|ref|YP_448535.1| - 0.043 13.6 1.1 0.063 13.1 0.7 1.4 1 0 0 1 1 1 0 Double zinc ribbon RecR PF02132.10 gi|84490303|ref|YP_448535.1| - 0.05 13.0 1.0 0.059 12.8 0.7 1.2 1 0 0 1 1 1 0 RecR protein zf-ribbon_3 PF13248.1 gi|84490303|ref|YP_448535.1| - 0.5 9.6 4.9 2.1 7.6 3.4 1.9 1 1 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.4 gi|84490303|ref|YP_448535.1| - 0.82 9.4 4.7 6.1 6.6 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF35_N PF12172.3 gi|84490303|ref|YP_448535.1| - 2.3 8.2 4.7 35 4.4 3.3 2.4 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ISL3 PF14690.1 gi|84490303|ref|YP_448535.1| - 3.5 7.7 5.1 5.6 7.0 0.2 2.4 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Abhydrolase_1 PF00561.15 gi|84490304|ref|YP_448536.1| - 6.1e-14 52.1 0.1 8.9e-14 51.5 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.2 gi|84490304|ref|YP_448536.1| - 1.2e-08 35.1 0.0 1.5e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|84490304|ref|YP_448536.1| - 9.1e-06 25.4 0.0 2.7e-05 23.9 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|84490304|ref|YP_448536.1| - 0.02 14.0 0.0 2 7.5 0.0 2.3 2 0 0 2 2 2 0 Prolyl oligopeptidase family Esterase PF00756.15 gi|84490304|ref|YP_448536.1| - 0.05 13.0 0.0 0.063 12.6 0.0 1.3 1 0 0 1 1 1 0 Putative esterase BAAT_C PF08840.6 gi|84490304|ref|YP_448536.1| - 0.086 12.5 0.1 0.21 11.2 0.1 1.8 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF2048 PF09752.4 gi|84490304|ref|YP_448536.1| - 0.15 10.8 0.0 0.21 10.4 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2048) EIF_2_alpha PF07541.7 gi|84490305|ref|YP_448537.1| - 3.6e-28 97.5 0.4 8.6e-28 96.3 0.0 1.8 2 1 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|84490305|ref|YP_448537.1| - 4.2e-11 42.7 0.2 9.2e-11 41.6 0.1 1.6 1 0 0 1 1 1 1 S1 RNA binding domain DUF2007 PF09413.5 gi|84490305|ref|YP_448537.1| - 0.0039 16.9 0.0 0.0085 15.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF2007) REV PF00424.13 gi|84490305|ref|YP_448537.1| - 0.035 14.0 0.3 0.084 12.7 0.2 1.6 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) DUF2209 PF09974.4 gi|84490305|ref|YP_448537.1| - 0.056 13.5 0.1 0.14 12.2 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2209) Ribosomal_S27e PF01667.12 gi|84490306|ref|YP_448538.1| - 2e-25 88.1 3.1 2.2e-25 87.9 2.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.7 gi|84490306|ref|YP_448538.1| - 0.0073 15.6 1.7 0.011 15.0 0.8 1.6 1 1 1 2 2 2 2 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|84490306|ref|YP_448538.1| - 0.028 14.0 0.7 0.033 13.8 0.5 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-CHY PF05495.7 gi|84490306|ref|YP_448538.1| - 0.037 14.1 1.0 0.062 13.4 0.7 1.3 1 0 0 1 1 1 0 CHY zinc finger zinc_ribbon_6 PF14599.1 gi|84490306|ref|YP_448538.1| - 0.05 13.3 2.2 0.071 12.9 1.5 1.2 1 0 0 1 1 1 0 Zinc-ribbon HypA PF01155.14 gi|84490306|ref|YP_448538.1| - 0.086 12.5 1.8 0.097 12.3 1.2 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-Sec23_Sec24 PF04810.10 gi|84490306|ref|YP_448538.1| - 0.096 12.2 0.3 0.17 11.5 0.1 1.5 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger zinc_ribbon_4 PF13717.1 gi|84490306|ref|YP_448538.1| - 0.1 12.3 1.4 7.4 6.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|84490306|ref|YP_448538.1| - 0.22 11.5 0.9 0.36 10.8 0.3 1.6 2 0 0 2 2 2 0 Zinc ribbon domain C1_1 PF00130.17 gi|84490306|ref|YP_448538.1| - 0.33 10.7 2.8 0.45 10.2 0.1 1.9 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Desulfoferrod_N PF06397.7 gi|84490306|ref|YP_448538.1| - 1.4 8.3 0.1 1.4 8.3 0.1 2.7 2 1 1 3 3 3 0 Desulfoferrodoxin, N-terminal domain zinc_ribbon_5 PF13719.1 gi|84490306|ref|YP_448538.1| - 2.4 7.8 5.8 6.6 6.4 0.3 2.4 1 1 1 2 2 2 0 zinc-ribbon domain Ribosomal_L44 PF00935.14 gi|84490307|ref|YP_448539.1| - 4.2e-27 93.9 2.9 4.2e-27 93.9 2.0 1.5 1 1 1 2 2 2 1 Ribosomal protein L44 NOB1_Zn_bind PF08772.6 gi|84490307|ref|YP_448539.1| - 0.0011 18.7 0.8 0.016 14.9 0.1 2.1 2 0 0 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.5 gi|84490307|ref|YP_448539.1| - 0.006 16.5 1.9 1.8 8.5 0.1 2.3 2 0 0 2 2 2 2 Zinc ribbon domain Elf1 PF05129.8 gi|84490307|ref|YP_448539.1| - 0.008 15.8 0.1 1.8 8.2 0.0 2.1 2 0 0 2 2 2 1 Transcription elongation factor Elf1 like Ribosomal_L33 PF00471.15 gi|84490307|ref|YP_448539.1| - 0.0087 16.2 2.0 0.0087 16.2 1.4 2.1 2 0 0 2 2 2 1 Ribosomal protein L33 zf-ISL3 PF14690.1 gi|84490307|ref|YP_448539.1| - 0.01 15.8 7.0 0.22 11.5 1.6 2.4 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Tnp_zf-ribbon_2 PF13842.1 gi|84490307|ref|YP_448539.1| - 0.011 16.0 4.6 2.2 8.7 0.1 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-ribbon_3 PF13248.1 gi|84490307|ref|YP_448539.1| - 0.022 13.9 1.2 3.8 6.8 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-UBR PF02207.15 gi|84490307|ref|YP_448539.1| - 0.023 14.3 1.7 3.8 7.3 0.2 2.1 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Rpr2 PF04032.11 gi|84490307|ref|YP_448539.1| - 0.032 14.0 0.5 0.045 13.6 0.4 1.3 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Cys_rich_KTR PF14205.1 gi|84490307|ref|YP_448539.1| - 0.042 13.2 0.3 0.042 13.2 0.2 1.8 2 0 0 2 2 2 0 Cysteine-rich KTR DUF1272 PF06906.6 gi|84490307|ref|YP_448539.1| - 0.052 13.3 0.6 10 6.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Lar_restr_allev PF14354.1 gi|84490307|ref|YP_448539.1| - 0.055 13.7 0.3 0.15 12.3 0.2 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar HypA PF01155.14 gi|84490307|ref|YP_448539.1| - 0.057 13.1 2.6 5 6.8 0.2 2.1 1 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family zf-Mss51 PF13824.1 gi|84490307|ref|YP_448539.1| - 0.12 12.2 1.9 0.25 11.2 1.3 1.5 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Nudix_N_2 PF14803.1 gi|84490307|ref|YP_448539.1| - 0.14 11.8 2.0 12 5.6 0.0 2.3 2 0 0 2 2 2 0 Nudix N-terminal Zn_Tnp_IS1595 PF12760.2 gi|84490307|ref|YP_448539.1| - 0.23 11.3 8.0 1.7 8.5 0.1 2.5 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|84490307|ref|YP_448539.1| - 0.28 10.7 8.1 2.1 7.9 1.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|84490307|ref|YP_448539.1| - 0.33 10.8 4.4 4.9 7.0 3.1 2.1 1 1 0 1 1 1 0 Double zinc ribbon Ogr_Delta PF04606.7 gi|84490307|ref|YP_448539.1| - 0.42 10.2 3.3 2.9 7.6 0.2 2.3 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger TFIIS_C PF01096.13 gi|84490307|ref|YP_448539.1| - 0.45 10.1 8.5 3.1 7.5 0.2 2.7 2 1 1 3 3 3 0 Transcription factor S-II (TFIIS) TF_Zn_Ribbon PF08271.7 gi|84490307|ref|YP_448539.1| - 0.68 9.2 2.9 5.1 6.5 0.1 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C2H2 PF00096.21 gi|84490307|ref|YP_448539.1| - 0.85 10.0 5.7 6.3 7.3 0.3 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_Tnp_IS91 PF14319.1 gi|84490307|ref|YP_448539.1| - 1 8.9 4.2 3.4 7.2 0.6 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain zf-B_box PF00643.19 gi|84490307|ref|YP_448539.1| - 1.2 9.0 6.1 8.9 6.3 1.2 2.1 2 0 0 2 2 2 0 B-box zinc finger zf-H2C2_2 PF13465.1 gi|84490307|ref|YP_448539.1| - 1.6 9.1 9.5 2.1 8.8 0.2 2.7 3 0 0 3 3 2 0 Zinc-finger double domain PCNA_N PF00705.13 gi|84490309|ref|YP_448541.1| - 1.2e-21 76.4 3.5 3.9e-21 74.8 0.8 2.1 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.8 gi|84490309|ref|YP_448541.1| - 6.2e-10 38.6 0.1 1.3e-09 37.6 0.1 1.5 1 1 0 1 1 1 1 Rad9 Rad1 PF02144.11 gi|84490309|ref|YP_448541.1| - 4.5e-07 28.9 0.6 0.0044 15.8 0.1 2.1 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 PCNA_C PF02747.10 gi|84490309|ref|YP_448541.1| - 5.6e-05 23.0 2.3 0.0022 17.9 0.2 3.2 2 2 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Hus1 PF04005.7 gi|84490309|ref|YP_448541.1| - 0.00036 19.5 0.1 0.00052 19.0 0.0 1.3 1 0 0 1 1 1 1 Hus1-like protein AHS1 PF02682.11 gi|84490309|ref|YP_448541.1| - 0.051 13.0 0.0 0.081 12.3 0.0 1.2 1 0 0 1 1 1 0 Allophanate hydrolase subunit 1 DNA_pol3_beta_2 PF02767.11 gi|84490309|ref|YP_448541.1| - 0.09 12.8 1.0 0.41 10.6 0.1 2.1 1 1 1 2 2 2 0 DNA polymerase III beta subunit, central domain Malectin PF11721.3 gi|84490309|ref|YP_448541.1| - 0.14 11.9 0.2 0.47 10.1 0.0 1.9 2 1 1 3 3 3 0 Di-glucose binding within endoplasmic reticulum Antitoxin-MazE PF04014.13 gi|84490309|ref|YP_448541.1| - 1 9.1 5.3 1.5 8.5 0.3 2.8 3 0 0 3 3 3 0 Antidote-toxin recognition MazE Cytochrom_B_N PF00033.14 gi|84490310|ref|YP_448542.1| - 0.0049 16.2 0.0 0.0066 15.8 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB DUF4293 PF14126.1 gi|84490310|ref|YP_448542.1| - 0.014 15.3 1.7 0.023 14.6 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) Sorb PF02208.11 gi|84490310|ref|YP_448542.1| - 0.034 13.5 0.0 0.07 12.5 0.0 1.5 1 0 0 1 1 1 0 Sorbin homologous domain DUF872 PF05915.7 gi|84490310|ref|YP_448542.1| - 0.13 12.1 6.1 0.16 11.8 2.1 2.3 2 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) CRT10 PF08728.5 gi|84490310|ref|YP_448542.1| - 0.94 7.3 9.8 1.1 7.1 6.8 1.1 1 0 0 1 1 1 0 CRT10 DUF3040 PF11239.3 gi|84490310|ref|YP_448542.1| - 3.9 7.6 5.7 24 5.0 3.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) GAGA_bind PF06217.7 gi|84490310|ref|YP_448542.1| - 4.2 7.2 8.5 5.5 6.8 5.9 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family TFIIS_C PF01096.13 gi|84490311|ref|YP_448543.1| - 1.1e-17 63.3 4.5 1.1e-17 63.3 3.1 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.11 gi|84490311|ref|YP_448543.1| - 3.7e-10 39.2 10.9 3.1e-08 33.1 1.1 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|84490311|ref|YP_448543.1| - 3.2e-08 33.2 5.3 0.0004 20.1 0.8 2.2 2 0 0 2 2 2 2 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|84490311|ref|YP_448543.1| - 2.5e-07 30.3 7.6 7.4e-05 22.4 0.3 2.5 2 1 1 3 3 3 2 Transposase zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|84490311|ref|YP_448543.1| - 0.00017 21.2 9.8 0.00064 19.4 3.0 2.4 2 0 0 2 2 2 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.7 gi|84490311|ref|YP_448543.1| - 0.00028 20.1 14.7 0.016 14.4 2.8 2.9 2 1 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_2 PF13240.1 gi|84490311|ref|YP_448543.1| - 0.00034 20.0 17.9 0.0093 15.4 3.9 3.2 3 0 0 3 3 3 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|84490311|ref|YP_448543.1| - 0.00049 19.7 9.9 0.031 13.9 0.8 2.8 2 1 1 3 3 3 2 Putative transposase DNA-binding domain zinc_ribbon_5 PF13719.1 gi|84490311|ref|YP_448543.1| - 0.0016 17.9 10.6 3.8 7.1 0.1 4.7 3 1 3 6 6 6 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|84490311|ref|YP_448543.1| - 0.0021 17.1 15.6 0.26 10.5 0.1 3.7 3 1 1 4 4 4 2 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|84490311|ref|YP_448543.1| - 0.0023 17.6 6.6 0.026 14.3 0.3 2.5 2 1 0 2 2 2 1 zinc-ribbons zf-C4_Topoisom PF01396.14 gi|84490311|ref|YP_448543.1| - 0.0032 16.9 13.0 0.33 10.4 0.1 3.6 2 2 1 3 3 3 2 Topoisomerase DNA binding C4 zinc finger zf-DNA_Pol PF08996.5 gi|84490311|ref|YP_448543.1| - 0.0032 16.8 2.1 0.0052 16.1 0.1 2.0 1 1 1 2 2 2 1 DNA Polymerase alpha zinc finger RRN7 PF11781.3 gi|84490311|ref|YP_448543.1| - 0.0089 15.5 8.6 0.023 14.1 0.6 3.2 3 0 0 3 3 3 1 RNA polymerase I-specific transcription initiation factor Rrn7 zinc_ribbon_4 PF13717.1 gi|84490311|ref|YP_448543.1| - 0.011 15.4 13.2 4.5 7.0 0.1 4.8 3 1 3 6 6 6 0 zinc-ribbon domain UPF0547 PF10571.4 gi|84490311|ref|YP_448543.1| - 0.012 15.2 12.9 0.36 10.5 2.6 3.8 3 1 0 3 3 3 0 Uncharacterised protein family UPF0547 DUF2387 PF09526.5 gi|84490311|ref|YP_448543.1| - 0.017 15.0 12.3 0.086 12.7 0.4 3.0 2 2 0 2 2 2 0 Probable metal-binding protein (DUF2387) Prok-RING_1 PF14446.1 gi|84490311|ref|YP_448543.1| - 0.025 14.3 11.4 0.028 14.1 0.8 3.3 4 0 0 4 4 3 0 Prokaryotic RING finger family 1 DUF4428 PF14471.1 gi|84490311|ref|YP_448543.1| - 0.045 13.5 4.1 0.58 9.9 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4428) zf-NADH-PPase PF09297.6 gi|84490311|ref|YP_448543.1| - 0.049 13.1 7.7 2.5 7.7 1.7 3.5 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-C2HC5 PF06221.8 gi|84490311|ref|YP_448543.1| - 0.055 13.2 4.0 0.092 12.5 0.3 2.4 3 0 0 3 3 2 0 Putative zinc finger motif, C2HC5-type zf-AN1 PF01428.11 gi|84490311|ref|YP_448543.1| - 0.061 13.2 9.4 0.67 9.8 1.3 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger Nudix_N_2 PF14803.1 gi|84490311|ref|YP_448543.1| - 0.066 12.9 12.0 2.7 7.7 0.2 3.9 3 1 0 3 3 3 0 Nudix N-terminal zf-TFIIB PF13453.1 gi|84490311|ref|YP_448543.1| - 0.071 12.3 0.5 0.071 12.3 0.3 2.7 3 0 0 3 3 3 0 Transcription factor zinc-finger Ogr_Delta PF04606.7 gi|84490311|ref|YP_448543.1| - 0.083 12.5 7.2 0.2 11.3 0.3 3.0 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger Zn_ribbon_recom PF13408.1 gi|84490311|ref|YP_448543.1| - 0.089 13.0 6.2 0.44 10.8 0.1 3.0 2 2 0 2 2 2 0 Recombinase zinc beta ribbon domain DUF2757 PF10955.3 gi|84490311|ref|YP_448543.1| - 0.091 12.9 0.2 0.091 12.9 0.1 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF2757) HypA PF01155.14 gi|84490311|ref|YP_448543.1| - 0.099 12.3 8.0 0.08 12.6 0.3 2.8 1 1 2 3 3 3 0 Hydrogenase expression/synthesis hypA family TerY-C PF15616.1 gi|84490311|ref|YP_448543.1| - 0.1 12.5 6.4 1.9 8.3 0.3 2.3 1 1 1 2 2 2 0 TerY-C metal binding domain Ribosomal_L32p PF01783.18 gi|84490311|ref|YP_448543.1| - 0.13 12.4 2.2 2.9 8.1 0.1 2.6 3 0 0 3 3 2 0 Ribosomal L32p protein family DUF4451 PF14616.1 gi|84490311|ref|YP_448543.1| - 0.14 11.9 2.0 0.19 11.4 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4451) Ribosomal_L37e PF01907.14 gi|84490311|ref|YP_448543.1| - 0.14 11.9 0.2 0.14 11.9 0.1 2.8 2 1 0 2 2 2 0 Ribosomal protein L37e C1_1 PF00130.17 gi|84490311|ref|YP_448543.1| - 0.17 11.5 8.3 1.7 8.4 0.9 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_2 PF13465.1 gi|84490311|ref|YP_448543.1| - 0.18 12.1 14.5 5.5 7.4 0.1 4.2 4 0 0 4 4 4 0 Zinc-finger double domain PhnA_Zn_Ribbon PF08274.7 gi|84490311|ref|YP_448543.1| - 0.23 11.2 7.7 13 5.6 0.0 3.9 4 0 0 4 4 4 0 PhnA Zinc-Ribbon FYVE PF01363.16 gi|84490311|ref|YP_448543.1| - 0.24 11.3 4.0 0.53 10.2 2.8 1.7 1 1 0 1 1 1 0 FYVE zinc finger IBR PF01485.16 gi|84490311|ref|YP_448543.1| - 0.24 11.2 9.4 2 8.3 0.8 3.0 2 1 0 2 2 2 0 IBR domain Cys_rich_CPCC PF14206.1 gi|84490311|ref|YP_448543.1| - 0.26 10.8 4.6 0.43 10.1 0.4 2.7 3 0 0 3 3 2 0 Cysteine-rich CPCC FYDLN_acid PF09538.5 gi|84490311|ref|YP_448543.1| - 0.32 11.6 5.0 6.5 7.3 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) Elf1 PF05129.8 gi|84490311|ref|YP_448543.1| - 0.32 10.6 9.4 1 9.0 1.4 3.2 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like DUF35_N PF12172.3 gi|84490311|ref|YP_448543.1| - 0.43 10.5 0.3 0.43 10.5 0.2 3.7 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-FPG_IleRS PF06827.9 gi|84490311|ref|YP_448543.1| - 0.5 10.0 4.7 5.9 6.6 1.0 2.6 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS PolC_DP2 PF03833.8 gi|84490311|ref|YP_448543.1| - 0.72 7.4 4.4 0.66 7.5 0.3 1.9 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 DNA_RNApol_7kD PF03604.8 gi|84490311|ref|YP_448543.1| - 0.72 9.3 9.1 17 4.9 0.0 3.7 3 1 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit C1_3 PF07649.7 gi|84490311|ref|YP_448543.1| - 0.84 9.7 13.5 0.84 9.7 0.2 3.4 4 0 0 4 4 3 0 C1-like domain GFA PF04828.9 gi|84490311|ref|YP_448543.1| - 0.93 9.4 9.7 2.9 7.8 0.5 3.2 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme DUF164 PF02591.10 gi|84490311|ref|YP_448543.1| - 0.94 9.3 6.1 8 6.3 0.2 3.2 3 1 0 3 3 3 0 Putative zinc ribbon domain Rep_fac-A_C PF08646.5 gi|84490311|ref|YP_448543.1| - 1.1 8.9 7.7 1.3 8.6 0.5 2.3 1 1 1 2 2 2 0 Replication factor-A C terminal domain Lar_restr_allev PF14354.1 gi|84490311|ref|YP_448543.1| - 1.2 9.5 11.9 0.57 10.5 0.5 2.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 gi|84490311|ref|YP_448543.1| - 1.6 8.7 17.6 13 5.7 0.1 4.6 4 1 0 4 4 4 0 Zinc ribbon domain zf-LITAF-like PF10601.4 gi|84490311|ref|YP_448543.1| - 1.7 8.5 8.0 3.6 7.5 0.0 3.3 3 1 1 4 4 3 0 LITAF-like zinc ribbon domain zf-Mss51 PF13824.1 gi|84490311|ref|YP_448543.1| - 1.9 8.3 7.9 0.54 10.1 0.2 2.6 2 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-ISL3 PF14690.1 gi|84490311|ref|YP_448543.1| - 2.5 8.1 12.7 5.2 7.1 0.0 3.9 3 1 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Rubredoxin PF00301.15 gi|84490311|ref|YP_448543.1| - 2.6 7.9 14.9 7.4 6.5 0.1 4.1 3 1 1 4 4 4 0 Rubredoxin zf-RING_3 PF14369.1 gi|84490311|ref|YP_448543.1| - 3.3 7.7 7.1 10 6.2 0.0 3.3 4 0 0 4 4 3 0 zinc-finger Tnp_zf-ribbon_2 PF13842.1 gi|84490311|ref|YP_448543.1| - 4.1 7.8 9.8 74 3.8 0.1 3.9 3 1 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon zf-RING_5 PF14634.1 gi|84490311|ref|YP_448543.1| - 4.2 7.1 8.7 5.9 6.6 0.5 2.7 2 2 0 2 2 2 0 zinc-RING finger domain DUF2296 PF10058.4 gi|84490311|ref|YP_448543.1| - 4.2 7.1 9.6 4.7 7.0 1.6 3.5 3 1 0 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) zf-MYND PF01753.13 gi|84490311|ref|YP_448543.1| - 4.4 7.2 7.9 5.8 6.8 0.5 2.4 2 0 0 2 2 2 0 MYND finger DNA_ligase_ZBD PF03119.11 gi|84490311|ref|YP_448543.1| - 5.2 6.8 10.1 9.9 5.9 0.1 2.9 3 1 0 3 3 2 0 NAD-dependent DNA ligase C4 zinc finger domain A2L_zn_ribbon PF08792.5 gi|84490311|ref|YP_448543.1| - 8.4 5.9 14.7 1.6 8.2 0.3 3.9 3 1 2 5 5 5 0 A2L zinc ribbon domain zf-HIT PF04438.11 gi|84490311|ref|YP_448543.1| - 8.6 6.1 12.5 12 5.5 0.1 3.2 3 1 0 3 3 3 0 HIT zinc finger NUDIX PF00293.23 gi|84490312|ref|YP_448544.1| - 5.1e-23 81.2 0.0 5.7e-23 81.0 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|84490312|ref|YP_448544.1| - 0.0058 16.0 0.0 0.023 14.0 0.0 1.8 1 1 0 1 1 1 1 NUDIX domain RNA_pol_L_2 PF13656.1 gi|84490313|ref|YP_448545.1| - 7.4e-15 54.1 0.0 8.7e-15 53.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.19 gi|84490313|ref|YP_448545.1| - 0.00041 19.3 0.0 0.0011 18.0 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ECR1_N PF14382.1 gi|84490314|ref|YP_448546.1| - 1e-14 53.5 0.4 3.3e-14 51.8 0.0 2.0 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.4 gi|84490314|ref|YP_448546.1| - 3.4e-06 26.9 0.9 7.7e-06 25.7 0.6 1.6 1 0 0 1 1 1 1 Exosome component EXOSC1/CSL4 S1 PF00575.18 gi|84490314|ref|YP_448546.1| - 4.8e-05 23.3 1.9 0.015 15.4 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain Ribosomal_L14 PF00238.14 gi|84490314|ref|YP_448546.1| - 0.3 10.8 4.9 6.7 6.4 1.0 2.5 1 1 1 2 2 2 0 Ribosomal protein L14p/L23e Ribosomal_S17 PF00366.15 gi|84490314|ref|YP_448546.1| - 9.3 6.3 7.6 14 5.8 1.2 2.9 2 1 1 3 3 3 0 Ribosomal protein S17 Diphthamide_syn PF01866.12 gi|84490315|ref|YP_448547.1| - 3e-101 338.6 0.0 3.6e-101 338.4 0.0 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Pribosyltran PF00156.22 gi|84490316|ref|YP_448548.1| - 1.4e-21 76.5 0.1 2.2e-21 75.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|84490316|ref|YP_448548.1| - 0.0044 16.3 0.0 0.0055 16.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|84490316|ref|YP_448548.1| - 0.02 14.0 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase SRP54 PF00448.17 gi|84490317|ref|YP_448549.1| - 1.3e-73 246.6 0.1 1.3e-73 246.6 0.0 1.7 2 0 0 2 2 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|84490317|ref|YP_448549.1| - 6.8e-29 100.1 1.8 6.8e-29 100.1 1.3 3.3 4 0 0 4 4 3 1 Signal peptide binding domain SRP54_N PF02881.14 gi|84490317|ref|YP_448549.1| - 7.7e-16 57.9 2.4 7.7e-16 57.9 1.6 2.8 3 0 0 3 3 1 1 SRP54-type protein, helical bundle domain CbiA PF01656.18 gi|84490317|ref|YP_448549.1| - 3.7e-06 26.4 1.7 9.4e-06 25.1 0.5 2.2 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.1 gi|84490317|ref|YP_448549.1| - 4.1e-06 26.7 0.0 8.4e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|84490317|ref|YP_448549.1| - 5.6e-05 23.2 0.1 0.00024 21.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain cobW PF02492.14 gi|84490317|ref|YP_448549.1| - 0.0002 20.8 4.2 0.0038 16.6 2.9 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.1 gi|84490317|ref|YP_448549.1| - 0.00021 22.0 0.2 0.0011 19.7 0.1 2.4 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|84490317|ref|YP_448549.1| - 0.00023 20.8 1.0 0.00084 19.0 0.7 1.9 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.18 gi|84490317|ref|YP_448549.1| - 0.00027 20.8 0.2 0.001 18.9 0.0 2.1 2 0 0 2 2 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 gi|84490317|ref|YP_448549.1| - 0.00032 20.1 0.9 0.00061 19.2 0.1 2.1 2 1 0 2 2 1 1 Elongation factor Tu GTP binding domain AAA_16 PF13191.1 gi|84490317|ref|YP_448549.1| - 0.0008 19.4 0.0 0.0019 18.2 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.7 gi|84490317|ref|YP_448549.1| - 0.00088 18.4 0.0 0.0019 17.3 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin ArgK PF03308.11 gi|84490317|ref|YP_448549.1| - 0.00095 18.0 0.1 0.018 13.8 0.0 2.3 2 0 0 2 2 2 1 ArgK protein ATP_bind_1 PF03029.12 gi|84490317|ref|YP_448549.1| - 0.0013 18.3 0.2 0.013 15.0 0.0 2.6 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Peptidase_U57 PF05582.7 gi|84490317|ref|YP_448549.1| - 0.0019 17.2 0.1 0.0032 16.4 0.0 1.4 1 0 0 1 1 1 1 YabG peptidase U57 AAA_24 PF13479.1 gi|84490317|ref|YP_448549.1| - 0.002 17.7 0.0 0.0053 16.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.13 gi|84490317|ref|YP_448549.1| - 0.0035 16.4 0.0 0.0068 15.5 0.0 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_19 PF13245.1 gi|84490317|ref|YP_448549.1| - 0.0036 17.0 0.0 0.0092 15.7 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain Arf PF00025.16 gi|84490317|ref|YP_448549.1| - 0.0044 16.2 1.1 0.0087 15.3 0.1 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family SRPRB PF09439.5 gi|84490317|ref|YP_448549.1| - 0.0044 16.2 3.5 0.36 10.0 0.0 2.8 3 0 0 3 3 3 1 Signal recognition particle receptor beta subunit TrwB_AAD_bind PF10412.4 gi|84490317|ref|YP_448549.1| - 0.0059 15.2 0.1 0.011 14.3 0.1 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain G-alpha PF00503.15 gi|84490317|ref|YP_448549.1| - 0.0071 15.0 0.1 0.008 14.9 0.0 1.3 1 0 0 1 1 1 1 G-protein alpha subunit MipZ PF09140.6 gi|84490317|ref|YP_448549.1| - 0.0071 15.4 0.9 0.3 10.1 0.6 2.5 1 1 0 1 1 1 1 ATPase MipZ PduV-EutP PF10662.4 gi|84490317|ref|YP_448549.1| - 0.0086 15.5 0.1 0.16 11.4 0.0 2.6 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Thymidylate_kin PF02223.12 gi|84490317|ref|YP_448549.1| - 0.0088 15.4 0.7 0.026 13.8 0.5 1.8 1 0 0 1 1 1 1 Thymidylate kinase AAA_10 PF12846.2 gi|84490317|ref|YP_448549.1| - 0.009 15.4 0.0 0.044 13.2 0.0 2.1 2 1 0 2 2 2 1 AAA-like domain TPP_enzyme_M PF00205.17 gi|84490317|ref|YP_448549.1| - 0.0093 15.7 0.0 0.1 12.3 0.0 2.3 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, central domain AAA_18 PF13238.1 gi|84490317|ref|YP_448549.1| - 0.0099 16.1 0.3 0.044 14.0 0.2 2.3 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.15 gi|84490317|ref|YP_448549.1| - 0.012 15.2 0.0 0.026 14.1 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase KTI12 PF08433.5 gi|84490317|ref|YP_448549.1| - 0.02 14.1 0.0 0.05 12.7 0.0 1.7 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_32 PF13654.1 gi|84490317|ref|YP_448549.1| - 0.034 12.8 0.0 0.069 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain LpxK PF02606.9 gi|84490317|ref|YP_448549.1| - 0.038 12.9 0.1 0.07 12.0 0.1 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase FtsK_SpoIIIE PF01580.13 gi|84490317|ref|YP_448549.1| - 0.062 12.7 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Pox_A32 PF04665.7 gi|84490317|ref|YP_448549.1| - 0.065 12.5 0.0 0.17 11.1 0.0 1.7 1 0 0 1 1 1 0 Poxvirus A32 protein Glyco_transf_4 PF13439.1 gi|84490317|ref|YP_448549.1| - 0.069 12.8 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 RNA_helicase PF00910.17 gi|84490317|ref|YP_448549.1| - 0.2 11.8 3.7 0.45 10.7 0.3 2.9 3 1 0 3 3 1 0 RNA helicase ResIII PF04851.10 gi|84490317|ref|YP_448549.1| - 0.33 10.7 2.2 0.57 9.9 0.5 2.2 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit Glyco_trans_1_2 PF13524.1 gi|84490318|ref|YP_448550.1| - 1.1e-24 86.5 0.0 1e-14 54.5 0.0 3.1 2 1 0 2 2 2 2 Glycosyl transferases group 1 Glycos_transf_2 PF00535.21 gi|84490318|ref|YP_448550.1| - 3.5e-12 46.3 0.7 1.2e-11 44.5 0.5 1.9 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_1_4 PF13692.1 gi|84490318|ref|YP_448550.1| - 2.4e-08 34.2 0.0 0.019 15.0 0.0 3.3 4 0 0 4 4 4 2 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|84490318|ref|YP_448550.1| - 4.9e-06 26.0 0.6 0.013 14.8 0.0 3.5 3 0 0 3 3 3 2 Glycosyl transferases group 1 Anemone_cytotox PF06369.7 gi|84490318|ref|YP_448550.1| - 0.13 11.6 5.2 0.091 12.1 0.2 3.0 3 0 0 3 3 3 0 Sea anemone cytotoxic protein THUMP PF02926.12 gi|84490319|ref|YP_448551.1| - 3.9e-05 23.5 0.9 3.9e-05 23.5 0.6 2.3 2 1 0 2 2 2 1 THUMP domain DUF2703 PF10865.3 gi|84490319|ref|YP_448551.1| - 0.012 15.5 0.2 0.13 12.1 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2703) RuvB_C PF05491.8 gi|84490319|ref|YP_448551.1| - 0.078 12.6 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase ruvB C-terminus Luciferase_N PF05295.6 gi|84490319|ref|YP_448551.1| - 0.13 12.1 0.6 0.4 10.5 0.1 2.0 3 0 0 3 3 3 0 Luciferase/LBP N-terminal domain Ribosomal_L21e PF01157.13 gi|84490320|ref|YP_448552.1| - 1.5e-27 95.3 2.5 1.6e-27 95.1 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.11 gi|84490321|ref|YP_448553.1| - 7.1e-17 61.4 1.6 8e-17 61.3 1.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb4 RrnaAD PF00398.15 gi|84490322|ref|YP_448554.1| - 2.6e-51 174.1 2.3 3e-51 173.9 1.6 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Met_10 PF02475.11 gi|84490322|ref|YP_448554.1| - 1.3e-11 44.5 0.4 2.2e-11 43.7 0.3 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|84490322|ref|YP_448554.1| - 2e-09 38.0 0.0 3.7e-09 37.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|84490322|ref|YP_448554.1| - 2.2e-09 36.6 0.2 4.3e-09 35.7 0.2 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_31 PF13847.1 gi|84490322|ref|YP_448554.1| - 3.9e-09 36.2 1.1 7.3e-09 35.3 0.7 1.7 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|84490322|ref|YP_448554.1| - 1.8e-08 33.9 0.0 3.4e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|84490322|ref|YP_448554.1| - 2.6e-08 33.8 0.0 3.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|84490322|ref|YP_448554.1| - 3.2e-05 24.3 0.0 6.7e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|84490322|ref|YP_448554.1| - 0.00018 21.1 0.2 0.00047 19.7 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) tRNA_U5-meth_tr PF05958.6 gi|84490322|ref|YP_448554.1| - 0.00041 19.1 0.4 0.0007 18.3 0.3 1.3 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Cons_hypoth95 PF03602.10 gi|84490322|ref|YP_448554.1| - 0.00047 19.5 0.3 0.0013 18.2 0.0 1.8 2 0 0 2 2 2 1 Conserved hypothetical protein 95 PrmA PF06325.8 gi|84490322|ref|YP_448554.1| - 0.00085 18.5 1.3 0.0017 17.5 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.1 gi|84490322|ref|YP_448554.1| - 0.00088 19.5 0.0 0.0023 18.2 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|84490322|ref|YP_448554.1| - 0.0013 18.4 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|84490322|ref|YP_448554.1| - 0.002 17.2 0.0 0.0032 16.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.7 gi|84490322|ref|YP_448554.1| - 0.003 18.0 0.0 0.0083 16.5 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|84490322|ref|YP_448554.1| - 0.0058 15.7 1.0 0.01 15.0 0.7 1.4 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G DNA_methylase PF00145.12 gi|84490322|ref|YP_448554.1| - 0.0068 15.5 0.8 0.029 13.4 0.0 2.0 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase PRMT5 PF05185.11 gi|84490322|ref|YP_448554.1| - 0.008 15.1 0.5 0.008 15.1 0.3 1.9 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase DREV PF05219.7 gi|84490322|ref|YP_448554.1| - 0.0085 15.0 0.2 0.022 13.6 0.0 1.7 2 0 0 2 2 2 1 DREV methyltransferase DOT1 PF08123.8 gi|84490322|ref|YP_448554.1| - 0.02 14.1 0.5 0.27 10.5 0.0 2.1 2 0 0 2 2 2 0 Histone methylation protein DOT1 UPF0020 PF01170.13 gi|84490322|ref|YP_448554.1| - 0.04 13.5 0.2 0.1 12.1 0.0 1.7 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|84490323|ref|YP_448555.1| - 9.8e-25 86.8 0.0 1.4e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|84490323|ref|YP_448555.1| - 2e-16 60.1 0.0 2.6e-16 59.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|84490323|ref|YP_448555.1| - 6.9e-16 58.1 0.7 1.1e-15 57.5 0.5 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|84490323|ref|YP_448555.1| - 3.1e-15 56.0 1.6 6.2e-15 55.0 0.7 1.7 1 1 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.2 gi|84490323|ref|YP_448555.1| - 3.4e-14 53.3 0.0 5.8e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|84490323|ref|YP_448555.1| - 5.8e-09 35.8 1.3 5.8e-09 35.8 0.9 1.5 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_16 PF10294.4 gi|84490323|ref|YP_448555.1| - 1.5e-07 31.0 0.3 3.2e-07 29.9 0.2 1.5 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_12 PF08242.7 gi|84490323|ref|YP_448555.1| - 1e-06 29.1 0.1 3.5e-06 27.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|84490323|ref|YP_448555.1| - 1.7e-06 27.8 0.0 3.7e-06 26.7 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|84490323|ref|YP_448555.1| - 4.1e-06 26.3 0.0 6.3e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|84490323|ref|YP_448555.1| - 8.3e-06 25.0 0.0 2.4e-05 23.5 0.0 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.7 gi|84490323|ref|YP_448555.1| - 1.3e-05 25.6 0.0 7.1e-05 23.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|84490323|ref|YP_448555.1| - 1.7e-05 24.4 0.4 2e-05 24.2 0.2 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TehB PF03848.9 gi|84490323|ref|YP_448555.1| - 5.4e-05 22.4 0.9 7.1e-05 22.0 0.1 1.5 2 0 0 2 2 2 1 Tellurite resistance protein TehB tRNA_U5-meth_tr PF05958.6 gi|84490323|ref|YP_448555.1| - 8.4e-05 21.4 1.1 0.00016 20.5 0.8 1.4 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase UPF0020 PF01170.13 gi|84490323|ref|YP_448555.1| - 0.00011 21.8 0.0 0.0002 20.9 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|84490323|ref|YP_448555.1| - 0.00015 22.0 0.0 0.0004 20.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|84490323|ref|YP_448555.1| - 0.00016 20.7 0.0 0.00025 20.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase TRM PF02005.11 gi|84490323|ref|YP_448555.1| - 0.00021 20.3 0.1 0.00079 18.4 0.1 1.8 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase PCMT PF01135.14 gi|84490323|ref|YP_448555.1| - 0.00021 20.8 0.0 0.00035 20.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.10 gi|84490323|ref|YP_448555.1| - 0.00021 20.7 0.0 0.00036 19.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.13 gi|84490323|ref|YP_448555.1| - 0.00061 18.9 0.1 0.0014 17.7 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.12 gi|84490323|ref|YP_448555.1| - 0.00069 18.7 0.7 0.0036 16.3 0.1 2.0 2 0 0 2 2 2 1 Putative methyltransferase MethyltransfD12 PF02086.10 gi|84490323|ref|YP_448555.1| - 0.001 18.5 0.2 0.001 18.5 0.2 1.5 2 0 0 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase rRNA_methylase PF06962.7 gi|84490323|ref|YP_448555.1| - 0.0027 17.4 0.1 0.0065 16.1 0.1 1.6 2 0 0 2 2 2 1 Putative rRNA methylase DUF2431 PF10354.4 gi|84490323|ref|YP_448555.1| - 0.01 15.7 0.1 0.015 15.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2431) DUF3419 PF11899.3 gi|84490323|ref|YP_448555.1| - 0.028 13.1 0.1 0.044 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3419) Methyltransf_24 PF13578.1 gi|84490323|ref|YP_448555.1| - 0.031 15.0 0.0 0.082 13.7 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain DNA_methylase PF00145.12 gi|84490323|ref|YP_448555.1| - 0.076 12.1 0.1 0.13 11.3 0.0 1.3 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase MetW PF07021.7 gi|84490323|ref|YP_448555.1| - 0.086 12.2 0.1 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW P4Ha_N PF08336.6 gi|84490324|ref|YP_448556.1| - 1.2 8.9 9.7 0.11 12.2 0.8 3.0 2 2 1 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Vps36_ESCRT-II PF11605.3 gi|84490325|ref|YP_448557.1| - 0.0046 16.7 0.5 0.039 13.7 0.1 2.2 2 0 0 2 2 2 1 Vacuolar protein sorting protein 36 Vps36 bPH_3 PF14470.1 gi|84490325|ref|YP_448557.1| - 0.03 14.5 0.6 0.076 13.2 0.1 2.0 2 0 0 2 2 2 0 Bacterial PH domain CheF-arch PF04283.7 gi|84490325|ref|YP_448557.1| - 0.053 12.7 0.2 0.082 12.1 0.1 1.2 1 0 0 1 1 1 0 Chemotaxis signal transduction system protein F from archaea zf-ribbon_3 PF13248.1 gi|84490326|ref|YP_448558.1| - 2e-07 29.9 7.7 1.3e-05 24.2 2.5 2.5 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|84490326|ref|YP_448558.1| - 2.9e-06 26.9 7.3 6.1e-05 22.7 5.1 2.2 1 1 0 1 1 1 1 Double zinc ribbon UPF0547 PF10571.4 gi|84490326|ref|YP_448558.1| - 1e-05 25.1 6.3 0.00032 20.3 1.9 2.3 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 gi|84490326|ref|YP_448558.1| - 1.3e-05 24.5 6.3 1.3e-05 24.5 4.3 3.3 3 1 1 4 4 4 1 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|84490326|ref|YP_448558.1| - 0.003 17.4 2.4 3.6 7.6 0.0 3.0 3 0 0 3 3 3 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|84490326|ref|YP_448558.1| - 0.0033 16.7 7.6 0.062 12.6 3.1 3.1 2 1 0 2 2 2 1 TFIIB zinc-binding Nudix_N_2 PF14803.1 gi|84490326|ref|YP_448558.1| - 0.0036 16.9 6.9 0.46 10.2 0.1 3.2 3 0 0 3 3 3 1 Nudix N-terminal PhnA_Zn_Ribbon PF08274.7 gi|84490326|ref|YP_448558.1| - 0.0041 16.8 8.4 0.055 13.2 0.2 3.0 3 0 0 3 3 3 2 PhnA Zinc-Ribbon zinc-ribbons_6 PF07191.7 gi|84490326|ref|YP_448558.1| - 0.0067 16.1 2.4 2.2 8.1 0.7 2.2 2 0 0 2 2 2 2 zinc-ribbons HypA PF01155.14 gi|84490326|ref|YP_448558.1| - 0.011 15.4 2.4 0.031 13.9 0.1 2.0 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Zn_Tnp_IS1595 PF12760.2 gi|84490326|ref|YP_448558.1| - 0.012 15.4 6.1 0.38 10.5 0.0 2.9 2 1 0 2 2 2 0 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|84490326|ref|YP_448558.1| - 0.031 13.9 11.0 0.18 11.5 4.8 3.1 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit GFA PF04828.9 gi|84490326|ref|YP_448558.1| - 0.032 14.1 7.2 0.74 9.8 0.1 2.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ISL3 PF14690.1 gi|84490326|ref|YP_448558.1| - 0.043 13.8 4.5 9.6 6.3 0.1 3.1 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Rubredoxin PF00301.15 gi|84490326|ref|YP_448558.1| - 0.05 13.4 7.2 1.2 9.0 0.1 3.1 2 1 1 3 3 3 0 Rubredoxin RPA_interact_C PF14768.1 gi|84490326|ref|YP_448558.1| - 0.12 12.7 3.2 0.93 9.9 2.4 1.9 1 1 1 2 2 2 0 Replication protein A interacting C-terminal zf-C3HC4_3 PF13920.1 gi|84490326|ref|YP_448558.1| - 0.16 11.6 3.2 1.9 8.2 0.6 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Lar_restr_allev PF14354.1 gi|84490326|ref|YP_448558.1| - 0.16 12.2 3.1 16 5.9 0.0 2.8 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-IS66 PF13005.2 gi|84490326|ref|YP_448558.1| - 0.18 11.7 2.1 19 5.3 0.0 2.8 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 DUF1272 PF06906.6 gi|84490326|ref|YP_448558.1| - 0.21 11.4 3.6 4 7.3 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) DUF4428 PF14471.1 gi|84490326|ref|YP_448558.1| - 0.32 10.7 2.4 0.39 10.5 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4428) DUF2321 PF10083.4 gi|84490326|ref|YP_448558.1| - 0.33 10.4 6.8 1.9 7.9 0.5 2.9 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2321) A2L_zn_ribbon PF08792.5 gi|84490326|ref|YP_448558.1| - 0.38 10.2 9.4 6 6.4 3.6 3.2 2 1 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|84490326|ref|YP_448558.1| - 0.44 10.1 8.2 2 8.0 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain DUF35_N PF12172.3 gi|84490326|ref|YP_448558.1| - 0.45 10.4 4.8 4.6 7.2 0.1 2.8 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-RING_5 PF14634.1 gi|84490326|ref|YP_448558.1| - 0.49 10.1 3.7 6.2 6.6 1.1 2.3 2 0 0 2 2 2 0 zinc-RING finger domain zf-RING_3 PF14369.1 gi|84490326|ref|YP_448558.1| - 0.5 10.4 13.5 0.77 9.8 0.7 3.1 2 1 1 3 3 3 0 zinc-finger zf-C4_Topoisom PF01396.14 gi|84490326|ref|YP_448558.1| - 0.63 9.5 5.2 10 5.7 0.9 2.6 2 1 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Ogr_Delta PF04606.7 gi|84490326|ref|YP_448558.1| - 0.71 9.5 8.2 11 5.8 0.1 3.1 2 1 1 3 3 3 0 Ogr/Delta-like zinc finger DCR PF14047.1 gi|84490326|ref|YP_448558.1| - 0.73 10.1 4.3 0.49 10.7 0.4 2.2 2 0 0 2 2 2 0 Dppa2/4 conserved region C1_1 PF00130.17 gi|84490326|ref|YP_448558.1| - 0.77 9.5 4.4 19 5.0 0.0 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_4 PF13717.1 gi|84490326|ref|YP_448558.1| - 0.79 9.4 8.8 2.4 7.9 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain TFIIS_C PF01096.13 gi|84490326|ref|YP_448558.1| - 1.1 8.9 6.9 17 5.1 0.1 3.1 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-B_box PF00643.19 gi|84490326|ref|YP_448558.1| - 1.2 9.0 6.8 8.7 6.3 1.4 2.3 2 0 0 2 2 2 0 B-box zinc finger TerY-C PF15616.1 gi|84490326|ref|YP_448558.1| - 1.3 8.9 10.9 0.76 9.7 3.9 2.1 1 1 1 2 2 2 0 TerY-C metal binding domain OrfB_Zn_ribbon PF07282.6 gi|84490326|ref|YP_448558.1| - 1.6 8.4 6.2 5.2 6.7 1.4 2.7 2 1 1 3 3 3 0 Putative transposase DNA-binding domain DNA_ligase_ZBD PF03119.11 gi|84490326|ref|YP_448558.1| - 2 8.1 10.8 3.6 7.3 3.0 2.7 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DiS_P_DiS PF06750.8 gi|84490326|ref|YP_448558.1| - 3.3 7.5 4.5 1.1 9.0 0.7 2.1 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain NOB1_Zn_bind PF08772.6 gi|84490326|ref|YP_448558.1| - 3.3 7.6 11.4 2.9 7.7 0.6 2.9 1 1 2 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like DUF2387 PF09526.5 gi|84490326|ref|YP_448558.1| - 3.5 7.6 6.1 47 3.9 2.3 2.9 2 1 0 2 2 2 0 Probable metal-binding protein (DUF2387) zf-NADH-PPase PF09297.6 gi|84490326|ref|YP_448558.1| - 4.8 6.7 9.2 7.5 6.1 2.1 3.0 2 1 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-TFIIB PF13453.1 gi|84490326|ref|YP_448558.1| - 5 6.4 5.7 6.2 6.1 0.0 2.7 2 1 1 3 3 3 0 Transcription factor zinc-finger Auto_anti-p27 PF06677.7 gi|84490326|ref|YP_448558.1| - 5.2 6.9 6.3 9.9 6.0 1.8 2.4 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-RING_4 PF14570.1 gi|84490326|ref|YP_448558.1| - 7 6.3 8.0 25 4.5 0.0 2.8 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain Cript PF10235.4 gi|84490326|ref|YP_448558.1| - 8.3 6.8 9.0 1.4 9.3 1.7 2.2 1 1 0 2 2 2 0 Microtubule-associated protein CRIPT Fer4_12 PF13353.1 gi|84490327|ref|YP_448559.1| - 5.4e-29 101.0 0.1 7.3e-29 100.6 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|84490327|ref|YP_448559.1| - 3.1e-17 62.6 0.0 4.8e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|84490327|ref|YP_448559.1| - 9e-08 32.4 0.0 1.3e-07 31.9 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily AAA PF00004.24 gi|84490328|ref|YP_448560.1| - 1.6e-31 109.2 0.1 2.7e-29 102.0 0.0 2.7 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|84490328|ref|YP_448560.1| - 0.00061 19.5 0.2 0.012 15.3 0.1 3.0 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|84490328|ref|YP_448560.1| - 0.0022 18.8 0.0 0.019 15.7 0.0 2.6 2 2 0 2 2 2 1 AAA domain KaiC PF06745.8 gi|84490328|ref|YP_448560.1| - 0.0028 16.8 0.0 0.0091 15.1 0.0 1.8 1 0 0 1 1 1 1 KaiC AAA_14 PF13173.1 gi|84490328|ref|YP_448560.1| - 0.0048 16.7 0.0 0.016 15.1 0.0 2.0 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|84490328|ref|YP_448560.1| - 0.0069 16.6 0.3 0.043 14.1 0.0 2.5 3 0 0 3 3 2 1 AAA domain AAA_16 PF13191.1 gi|84490328|ref|YP_448560.1| - 0.013 15.4 0.2 0.05 13.5 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain Viral_helicase1 PF01443.13 gi|84490328|ref|YP_448560.1| - 0.017 14.6 0.0 0.038 13.5 0.0 1.6 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.1 gi|84490328|ref|YP_448560.1| - 0.022 14.9 0.0 1.6 8.8 0.1 2.6 1 1 1 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|84490328|ref|YP_448560.1| - 0.025 14.7 0.0 0.097 12.8 0.0 2.0 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.7 gi|84490328|ref|YP_448560.1| - 0.041 13.5 0.0 0.11 12.1 0.0 1.8 2 0 0 2 2 1 0 NACHT domain AAA_19 PF13245.1 gi|84490328|ref|YP_448560.1| - 0.043 13.5 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Part of AAA domain Mg_chelatase PF01078.16 gi|84490328|ref|YP_448560.1| - 0.049 12.7 0.0 0.089 11.9 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_2 PF07724.9 gi|84490328|ref|YP_448560.1| - 0.06 13.2 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Zeta_toxin PF06414.7 gi|84490328|ref|YP_448560.1| - 0.07 12.2 0.0 0.14 11.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_3 PF07726.6 gi|84490328|ref|YP_448560.1| - 0.11 12.0 0.0 2.8 7.5 0.0 2.8 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.1 gi|84490328|ref|YP_448560.1| - 0.13 12.3 0.0 0.58 10.2 0.0 2.1 2 1 1 3 3 3 0 Sigma-54 interaction domain DUF4364 PF14277.1 gi|84490329|ref|YP_448561.1| - 1.8 8.1 9.3 0.75 9.3 4.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) DUF2997 PF11211.3 gi|84490330|ref|YP_448562.1| - 1.8e-18 65.6 0.9 2.1e-18 65.4 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2997) IFN-gamma PF00714.12 gi|84490330|ref|YP_448562.1| - 0.016 15.0 0.3 0.016 15.0 0.2 1.1 1 0 0 1 1 1 0 Interferon gamma HHH_3 PF12836.2 gi|84490331|ref|YP_448563.1| - 4.9e-15 55.2 0.3 7.1e-15 54.7 0.2 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.18 gi|84490331|ref|YP_448563.1| - 0.011 15.3 0.1 0.02 14.5 0.1 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF4094 PF13334.1 gi|84490331|ref|YP_448563.1| - 0.063 13.6 0.0 0.12 12.7 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) FA_desaturase PF00487.19 gi|84490331|ref|YP_448563.1| - 0.1 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Zip PF02535.17 gi|84490331|ref|YP_448563.1| - 0.13 11.2 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Chordopox_G3 PF06129.7 gi|84490331|ref|YP_448563.1| - 0.88 9.7 3.5 0.98 9.5 1.6 1.8 2 1 0 2 2 2 0 Chordopoxvirus G3 protein DUF1980 PF09323.5 gi|84490331|ref|YP_448563.1| - 3.3 7.4 6.1 2.4 7.8 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) Nramp PF01566.13 gi|84490332|ref|YP_448564.1| - 1.3e-88 297.2 28.0 1.3e-88 297.2 19.4 1.6 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein DUF1986 PF09342.6 gi|84490332|ref|YP_448564.1| - 0.15 11.3 0.2 0.67 9.1 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1986) LRRC37AB_C PF14914.1 gi|84490332|ref|YP_448564.1| - 4.1 6.8 5.7 28 4.1 2.2 2.6 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain MgtE_N PF03448.12 gi|84490333|ref|YP_448565.1| - 1.1e-28 99.5 10.5 2.4e-28 98.4 7.3 1.6 1 0 0 1 1 1 1 MgtE intracellular N domain CBS PF00571.23 gi|84490333|ref|YP_448565.1| - 1.8e-15 56.4 4.3 4.9e-08 32.6 0.4 2.8 2 0 0 2 2 2 2 CBS domain PRC PF05239.11 gi|84490333|ref|YP_448565.1| - 7.1e-09 35.4 7.2 1.1e-05 25.2 0.1 3.4 3 0 0 3 3 3 2 PRC-barrel domain FliG_M PF14841.1 gi|84490333|ref|YP_448565.1| - 0.0051 16.8 0.5 4.6 7.3 0.0 2.6 1 1 1 2 2 2 2 FliG middle domain FliG_N PF14842.1 gi|84490333|ref|YP_448565.1| - 0.0093 16.0 2.0 2.5 8.2 0.1 2.7 1 1 0 2 2 2 2 FliG N-terminal domain FliG_C PF01706.11 gi|84490333|ref|YP_448565.1| - 0.33 10.9 6.4 0.12 12.3 0.4 2.6 2 1 1 3 3 3 0 FliG C-terminal domain Gluconate_2-dh3 PF13618.1 gi|84490333|ref|YP_448565.1| - 1.8 8.7 4.1 0.79 9.8 0.3 2.2 2 1 0 2 2 2 0 Gluconate 2-dehydrogenase subunit 3 AsnC_trans_reg PF01037.16 gi|84490334|ref|YP_448566.1| - 1.3e-15 56.8 0.4 2.4e-15 55.9 0.3 1.4 1 0 0 1 1 1 1 AsnC family HTH_24 PF13412.1 gi|84490334|ref|YP_448566.1| - 5e-14 51.4 0.9 8e-14 50.7 0.7 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|84490334|ref|YP_448566.1| - 1e-10 40.9 0.0 1.5e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|84490334|ref|YP_448566.1| - 6e-06 25.8 0.0 1.3e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|84490334|ref|YP_448566.1| - 3.5e-05 23.4 0.2 9.5e-05 22.0 0.1 1.7 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.15 gi|84490334|ref|YP_448566.1| - 5.4e-05 22.7 0.0 0.0001 21.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|84490334|ref|YP_448566.1| - 5.5e-05 22.9 0.0 0.00011 21.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|84490334|ref|YP_448566.1| - 0.00026 20.9 0.0 0.00061 19.7 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain RepL PF05732.6 gi|84490334|ref|YP_448566.1| - 0.001 18.2 1.2 0.0014 17.8 0.7 1.4 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_11 PF08279.7 gi|84490334|ref|YP_448566.1| - 0.0011 18.5 0.2 0.0031 17.1 0.2 1.8 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.2 gi|84490334|ref|YP_448566.1| - 0.0025 17.4 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|84490334|ref|YP_448566.1| - 0.0032 17.7 0.1 0.011 16.0 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_CodY PF08222.6 gi|84490334|ref|YP_448566.1| - 0.0045 16.3 0.3 0.0094 15.2 0.2 1.6 1 0 0 1 1 1 1 CodY helix-turn-helix domain HTH_IclR PF09339.5 gi|84490334|ref|YP_448566.1| - 0.0072 15.8 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.1 gi|84490334|ref|YP_448566.1| - 0.0084 16.2 0.0 0.016 15.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.6 gi|84490334|ref|YP_448566.1| - 0.018 14.7 1.6 0.033 13.9 0.2 2.1 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_Crp_2 PF13545.1 gi|84490334|ref|YP_448566.1| - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_psq PF05225.11 gi|84490334|ref|YP_448566.1| - 0.059 12.9 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 helix-turn-helix, Psq domain Rrf2 PF02082.15 gi|84490334|ref|YP_448566.1| - 0.062 13.4 0.2 0.19 11.8 0.0 1.9 2 1 0 2 2 2 0 Transcriptional regulator HTH_23 PF13384.1 gi|84490334|ref|YP_448566.1| - 0.098 12.3 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Mga PF05043.8 gi|84490334|ref|YP_448566.1| - 0.1 12.9 0.0 0.2 11.9 0.0 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|84490334|ref|YP_448566.1| - 0.11 11.9 0.0 0.23 10.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF161 PF02588.10 gi|84490335|ref|YP_448567.1| - 2.5e-09 37.3 33.9 1.4e-06 28.4 9.3 2.6 2 1 0 2 2 2 2 Uncharacterized BCR, YitT family COG1284 Ly49 PF08391.5 gi|84490337|ref|YP_448569.1| - 0.022 14.8 4.7 0.053 13.6 3.3 1.8 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region Baculo_11_kDa PF06143.6 gi|84490337|ref|YP_448569.1| - 0.12 11.8 2.9 0.078 12.3 0.6 1.8 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF1987 PF09345.5 gi|84490338|ref|YP_448570.1| - 0.029 14.1 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) CbiX PF01903.12 gi|84490339|ref|YP_448571.1| - 7.2e-57 189.9 0.2 1.1e-27 96.1 0.0 2.3 2 1 0 2 2 2 2 CbiX CbiK PF06180.6 gi|84490339|ref|YP_448571.1| - 1.1e-13 50.8 0.3 3.1e-06 26.4 0.0 2.2 2 0 0 2 2 2 2 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|84490339|ref|YP_448571.1| - 1.2e-08 34.3 0.0 0.0015 17.5 0.0 2.4 2 1 0 2 2 2 2 Ferrochelatase DUF3502 PF12010.3 gi|84490339|ref|YP_448571.1| - 0.0094 15.9 0.6 0.45 10.4 0.1 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3502) DUF2608 PF11019.3 gi|84490339|ref|YP_448571.1| - 0.021 13.7 0.0 0.092 11.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2608) DUF1894 PF08979.6 gi|84490339|ref|YP_448571.1| - 0.022 14.7 0.6 1.1 9.3 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1894) CheR PF01739.13 gi|84490339|ref|YP_448571.1| - 0.13 11.4 0.0 5.5 6.2 0.0 2.2 2 0 0 2 2 2 0 CheR methyltransferase, SAM binding domain DUF35 PF01796.12 gi|84490340|ref|YP_448572.1| - 5.3e-20 71.4 0.0 6.7e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|84490340|ref|YP_448572.1| - 3.5e-09 36.3 0.3 6.5e-09 35.4 0.2 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Prok-RING_1 PF14446.1 gi|84490340|ref|YP_448572.1| - 0.0015 18.2 1.1 0.0026 17.4 0.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zinc_ribbon_4 PF13717.1 gi|84490340|ref|YP_448572.1| - 0.0015 18.1 2.5 0.34 10.6 0.0 2.5 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|84490340|ref|YP_448572.1| - 0.0018 17.7 2.6 0.38 10.3 0.0 2.6 2 0 0 2 2 2 2 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|84490340|ref|YP_448572.1| - 0.0039 16.9 1.0 0.018 14.8 1.0 1.8 2 0 0 2 2 2 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.2 gi|84490340|ref|YP_448572.1| - 0.0044 16.7 0.8 0.0071 16.1 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.7 gi|84490340|ref|YP_448572.1| - 0.061 13.1 0.2 0.093 12.5 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-C3HC4_3 PF13920.1 gi|84490340|ref|YP_448572.1| - 0.073 12.7 1.1 0.11 12.1 0.8 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF1272 PF06906.6 gi|84490340|ref|YP_448572.1| - 0.17 11.7 1.3 0.33 10.8 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-C2HC_2 PF13913.1 gi|84490340|ref|YP_448572.1| - 0.18 11.4 0.7 0.18 11.4 0.5 2.1 1 1 1 2 2 2 0 zinc-finger of a C2HC-type HypA PF01155.14 gi|84490340|ref|YP_448572.1| - 0.2 11.3 1.1 0.43 10.2 0.3 1.8 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family DUF2296 PF10058.4 gi|84490340|ref|YP_448572.1| - 0.27 11.0 2.1 7.3 6.4 1.5 2.2 1 1 0 1 1 1 0 Predicted integral membrane metal-binding protein (DUF2296) zf-HIT PF04438.11 gi|84490340|ref|YP_448572.1| - 0.38 10.4 2.8 0.68 9.6 1.9 1.3 1 0 0 1 1 1 0 HIT zinc finger Zn_Tnp_IS1595 PF12760.2 gi|84490340|ref|YP_448572.1| - 0.86 9.4 4.6 0.44 10.3 0.2 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|84490340|ref|YP_448572.1| - 5.9 6.9 6.4 2.7e+02 1.6 4.5 2.7 1 1 0 1 1 1 0 Zinc ribbon domain CbiX PF01903.12 gi|84490341|ref|YP_448573.1| - 1.2e-30 105.7 3.7 1.8e-30 105.1 2.6 1.3 1 1 0 1 1 1 1 CbiX CbiK PF06180.6 gi|84490341|ref|YP_448573.1| - 1.1e-05 24.6 0.0 1.6e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|84490341|ref|YP_448573.1| - 0.00055 19.0 0.0 0.0006 18.8 0.0 1.2 1 0 0 1 1 1 1 Ferrochelatase Zip PF02535.17 gi|84490341|ref|YP_448573.1| - 0.00076 18.5 2.9 0.00076 18.5 2.0 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter SelP_N PF04592.9 gi|84490341|ref|YP_448573.1| - 0.45 9.8 11.8 0.61 9.4 8.2 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region AIRS PF00586.19 gi|84490342|ref|YP_448574.1| - 8.7e-20 70.7 0.0 1.9e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|84490342|ref|YP_448574.1| - 4.1e-06 26.8 0.0 5.9e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Exo_endo_phos_2 PF14529.1 gi|84490342|ref|YP_448574.1| - 0.016 14.8 0.0 0.035 13.7 0.0 1.6 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Radical_SAM PF04055.16 gi|84490343|ref|YP_448575.1| - 3.8e-20 72.7 0.0 6.3e-20 72.0 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|84490343|ref|YP_448575.1| - 3.7e-10 40.0 0.0 1e-09 38.6 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|84490343|ref|YP_448575.1| - 0.094 12.7 0.0 0.094 12.7 0.0 2.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain OrfB_Zn_ribbon PF07282.6 gi|84490343|ref|YP_448575.1| - 1.1 8.9 7.5 6.4 6.5 0.0 3.2 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DUF2207 PF09972.4 gi|84490344|ref|YP_448576.1| - 2.6e-125 418.9 18.2 3.3e-125 418.5 12.6 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) PrgI PF12666.2 gi|84490344|ref|YP_448576.1| - 0.012 15.7 0.0 0.037 14.1 0.0 1.9 1 0 0 1 1 1 0 PrgI family protein AA_permease_2 PF13520.1 gi|84490344|ref|YP_448576.1| - 0.024 13.2 1.1 0.027 13.0 0.1 1.5 2 0 0 2 2 2 0 Amino acid permease DUF912 PF06024.7 gi|84490344|ref|YP_448576.1| - 0.028 14.4 0.5 0.19 11.7 0.0 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) DUF2207 PF09972.4 gi|84490345|ref|YP_448577.1| - 2.4e-100 336.5 32.3 2.4e-100 336.5 22.4 1.3 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) DUF3609 PF12259.3 gi|84490345|ref|YP_448577.1| - 5.4e-05 22.0 0.4 0.00015 20.5 0.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3609) ODV-E18 PF10717.4 gi|84490345|ref|YP_448577.1| - 0.058 12.8 1.2 2.3 7.7 0.4 2.7 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 LemA PF04011.7 gi|84490346|ref|YP_448578.1| - 3.8e-67 225.0 4.0 4.6e-67 224.7 2.8 1.0 1 0 0 1 1 1 1 LemA family DUF3139 PF11337.3 gi|84490346|ref|YP_448578.1| - 0.035 14.3 1.3 0.8 10.0 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF327 PF03885.8 gi|84490346|ref|YP_448578.1| - 0.049 13.4 0.7 0.1 12.4 0.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF327) PBC PF03792.8 gi|84490346|ref|YP_448578.1| - 0.05 13.2 0.2 0.078 12.6 0.2 1.4 1 1 0 1 1 1 0 PBC domain EcoR124_C PF12008.3 gi|84490346|ref|YP_448578.1| - 0.056 12.6 5.0 0.91 8.6 3.7 2.0 1 1 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal BBP1_N PF15271.1 gi|84490346|ref|YP_448578.1| - 0.064 13.6 0.2 0.089 13.1 0.1 1.5 1 1 0 1 1 1 0 Spindle pole body component BBP1, Mps2-binding protein CDC37_N PF03234.9 gi|84490346|ref|YP_448578.1| - 0.11 12.8 0.2 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding DUF4446 PF14584.1 gi|84490346|ref|YP_448578.1| - 0.17 11.6 1.7 0.27 11.0 0.2 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF4446) Prominin PF05478.6 gi|84490346|ref|YP_448578.1| - 0.89 7.0 3.9 1.9 5.9 2.7 1.6 1 1 0 1 1 1 0 Prominin DUF4492 PF14899.1 gi|84490346|ref|YP_448578.1| - 1.5 8.3 4.0 1.1 8.8 1.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) Radical_SAM PF04055.16 gi|84490347|ref|YP_448579.1| - 1.8e-11 44.5 0.3 2.1e-10 41.0 0.0 2.5 3 0 0 3 3 3 1 Radical SAM superfamily HHH_3 PF12836.2 gi|84490347|ref|YP_448579.1| - 1.7e-06 27.8 1.6 3.7e-06 26.7 0.1 2.3 2 1 1 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.18 gi|84490347|ref|YP_448579.1| - 0.00013 21.4 0.1 0.00042 19.8 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif Fer4_12 PF13353.1 gi|84490347|ref|YP_448579.1| - 0.0016 18.5 0.6 0.0043 17.1 0.2 2.0 1 1 1 2 2 2 1 4Fe-4S single cluster domain DUF964 PF06133.6 gi|84490348|ref|YP_448580.1| - 0.0098 15.8 0.2 0.014 15.4 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF964) CbiA PF01656.18 gi|84490349|ref|YP_448581.1| - 5e-39 133.7 0.2 6.6e-39 133.3 0.1 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MipZ PF09140.6 gi|84490349|ref|YP_448581.1| - 4.8e-13 48.7 0.2 7.2e-12 44.9 0.1 2.0 1 1 0 1 1 1 1 ATPase MipZ AAA_31 PF13614.1 gi|84490349|ref|YP_448581.1| - 2.8e-12 46.8 0.0 4.2e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|84490349|ref|YP_448581.1| - 5e-11 42.2 0.2 5e-07 29.1 0.1 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YhjQ PF06564.7 gi|84490349|ref|YP_448581.1| - 3.3e-09 36.4 0.0 5.7e-09 35.7 0.0 1.4 1 1 0 1 1 1 1 YhjQ protein ArsA_ATPase PF02374.10 gi|84490349|ref|YP_448581.1| - 3.4e-07 29.5 0.4 1.9e-06 27.1 0.1 2.0 2 0 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.6 gi|84490349|ref|YP_448581.1| - 0.002 17.2 1.0 0.0045 16.1 0.1 1.9 2 1 0 2 2 2 1 VirC1 protein AAA_19 PF13245.1 gi|84490349|ref|YP_448581.1| - 0.0072 16.0 0.2 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Part of AAA domain ArgK PF03308.11 gi|84490349|ref|YP_448581.1| - 0.015 14.0 0.1 0.025 13.3 0.1 1.3 1 0 0 1 1 1 0 ArgK protein SRP54 PF00448.17 gi|84490349|ref|YP_448581.1| - 0.1 12.0 0.1 0.21 11.0 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_25 PF13481.1 gi|84490349|ref|YP_448581.1| - 0.12 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain FTHFS PF01268.14 gi|84490349|ref|YP_448581.1| - 0.14 10.1 0.2 0.21 9.5 0.1 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase CarboxypepD_reg PF13620.1 gi|84490350|ref|YP_448582.1| - 3.1e-07 30.3 10.6 3.3 7.8 0.0 7.0 5 2 1 6 6 6 4 Carboxypeptidase regulatory-like domain PDZ PF00595.19 gi|84490350|ref|YP_448582.1| - 0.014 15.5 0.4 3.8 7.7 0.0 3.1 2 0 0 2 2 2 0 PDZ domain (Also known as DHR or GLGF) A_amylase_inhib PF01356.14 gi|84490350|ref|YP_448582.1| - 0.033 13.9 4.1 12 5.8 0.0 4.4 5 0 0 5 5 5 0 Alpha amylase inhibitor RolB_RolC PF02027.12 gi|84490350|ref|YP_448582.1| - 0.46 9.6 7.8 3.4 6.7 0.1 4.5 5 0 0 5 5 5 0 RolB/RolC glucosidase family fn2 PF00040.14 gi|84490350|ref|YP_448582.1| - 1.8 8.5 10.3 16 5.6 0.2 3.7 3 0 0 3 3 3 0 Fibronectin type II domain Clathrin_propel PF01394.15 gi|84490350|ref|YP_448582.1| - 2.3 8.6 8.3 50 4.5 0.2 4.5 4 0 0 4 4 4 0 Clathrin propeller repeat tRNA-Thr_ED PF08915.6 gi|84490351|ref|YP_448583.1| - 3.1e-55 185.9 0.8 8.9e-55 184.4 0.1 2.1 2 0 0 2 2 2 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.15 gi|84490351|ref|YP_448583.1| - 1.9e-25 88.6 1.5 4.5e-25 87.4 1.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.20 gi|84490351|ref|YP_448583.1| - 2.8e-22 79.1 0.4 5.3e-22 78.2 0.3 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Tox-HNH-EHHH PF15657.1 gi|84490351|ref|YP_448583.1| - 0.008 16.2 0.3 0.027 14.5 0.0 2.0 2 0 0 2 2 2 1 HNH/Endo VII superfamily nuclease toxins YkyB PF14177.1 gi|84490351|ref|YP_448583.1| - 0.029 14.5 0.2 0.15 12.2 0.0 2.0 2 0 0 2 2 2 0 YkyB-like protein Glycoamylase PF10091.4 gi|84490351|ref|YP_448583.1| - 0.17 10.9 0.0 0.28 10.1 0.0 1.3 1 0 0 1 1 1 0 Putative glucoamylase tRNA-synt_1d PF00750.14 gi|84490352|ref|YP_448584.1| - 1.8e-46 158.5 0.8 3.1e-46 157.8 0.5 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|84490352|ref|YP_448584.1| - 7e-31 106.6 1.0 2.1e-30 105.0 0.7 1.9 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|84490352|ref|YP_448584.1| - 1.3e-23 83.2 0.7 4.6e-23 81.5 0.5 1.9 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.13 gi|84490352|ref|YP_448584.1| - 1.6e-07 30.3 0.1 0.013 14.2 0.0 3.3 3 0 0 3 3 3 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.14 gi|84490352|ref|YP_448584.1| - 0.00011 21.4 0.2 0.00021 20.5 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|84490352|ref|YP_448584.1| - 0.0016 17.2 0.2 0.16 10.5 0.0 3.2 3 0 0 3 3 3 1 tRNA synthetases class I (M) TSC22 PF01166.13 gi|84490352|ref|YP_448584.1| - 0.019 14.9 0.0 0.06 13.3 0.0 1.9 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF2479 PF10651.4 gi|84490352|ref|YP_448584.1| - 0.18 11.2 3.0 5.5 6.4 0.0 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF2479) Peptidase_S24 PF00717.18 gi|84490353|ref|YP_448585.1| - 7.8e-06 25.4 0.5 1.4e-05 24.6 0.3 1.5 1 0 0 1 1 1 1 Peptidase S24-like DNA_ligase_OB PF03120.11 gi|84490353|ref|YP_448585.1| - 0.032 13.8 0.2 2.6 7.7 0.0 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase OB-fold domain ILVD_EDD PF00920.16 gi|84490354|ref|YP_448586.1| - 2.1e-212 706.1 5.5 2.4e-212 705.9 3.8 1.0 1 0 0 1 1 1 1 Dehydratase family Orn_Arg_deC_N PF02784.11 gi|84490355|ref|YP_448587.1| - 9.4e-57 192.0 0.0 1.4e-56 191.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|84490355|ref|YP_448587.1| - 6.5e-23 80.6 0.0 1.1e-22 79.8 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.15 gi|84490355|ref|YP_448587.1| - 0.0057 16.2 0.0 0.0086 15.6 0.0 1.3 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain DAP_epimerase PF01678.14 gi|84490356|ref|YP_448588.1| - 3.2e-54 182.0 1.1 5.2e-31 107.0 0.1 2.1 2 0 0 2 2 2 2 Diaminopimelate epimerase Pro_racemase PF05544.6 gi|84490356|ref|YP_448588.1| - 0.0042 15.9 0.2 0.02 13.7 0.0 2.0 2 0 0 2 2 2 1 Proline racemase PhzC-PhzF PF02567.11 gi|84490356|ref|YP_448588.1| - 0.1 11.8 0.0 0.73 8.9 0.0 2.1 2 0 0 2 2 2 0 Phenazine biosynthesis-like protein Fer4_7 PF12838.2 gi|84490358|ref|YP_448590.1| - 5.6e-11 42.6 22.4 9.9e-08 32.2 8.3 3.2 2 2 1 3 3 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|84490358|ref|YP_448590.1| - 1.1e-09 37.4 16.8 2.2e-05 23.8 1.5 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|84490358|ref|YP_448590.1| - 1.5e-08 34.7 25.0 3.8e-06 27.0 9.5 3.1 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|84490358|ref|YP_448590.1| - 4.7e-06 26.3 17.1 4.7e-06 26.3 11.9 2.7 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|84490358|ref|YP_448590.1| - 7.8e-06 25.5 29.5 7.1e-05 22.5 12.2 2.7 2 2 2 4 4 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|84490358|ref|YP_448590.1| - 3.8e-05 24.3 23.4 0.003 18.2 0.9 3.2 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|84490358|ref|YP_448590.1| - 5.1e-05 22.9 22.1 0.0049 16.6 2.2 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|84490358|ref|YP_448590.1| - 0.001 19.2 13.1 0.0042 17.3 1.6 3.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|84490358|ref|YP_448590.1| - 0.0012 18.6 1.8 0.0012 18.6 1.3 3.4 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|84490358|ref|YP_448590.1| - 0.024 15.0 4.2 0.024 15.0 2.9 3.1 1 1 1 2 2 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|84490358|ref|YP_448590.1| - 0.024 15.1 5.8 0.024 15.1 4.0 3.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|84490358|ref|YP_448590.1| - 0.054 13.5 4.5 0.054 13.5 3.1 2.9 1 1 2 3 3 2 0 4Fe-4S dicluster domain TP_methylase PF00590.15 gi|84490359|ref|YP_448591.1| - 4.7e-30 104.8 0.1 6.6e-30 104.3 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases zf-like PF04071.7 gi|84490359|ref|YP_448591.1| - 1.7e-29 101.3 8.5 2.9e-29 100.5 5.9 1.4 1 0 0 1 1 1 1 Cysteine-rich small domain DUF3277 PF11681.3 gi|84490360|ref|YP_448592.1| - 0.03 13.8 2.9 0.04 13.3 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3277) GTPase_Cys_C PF12631.2 gi|84490360|ref|YP_448592.1| - 0.099 13.0 0.0 2.5 8.5 0.0 2.3 1 1 1 2 2 2 0 Catalytic cysteine-containing C-terminus of GTPase, MnmE Oxidored_q2 PF00420.19 gi|84490360|ref|YP_448592.1| - 0.3 10.6 2.1 0.78 9.3 0.0 2.2 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF4479 PF14794.1 gi|84490360|ref|YP_448592.1| - 1.2 8.6 8.3 0.18 11.3 0.5 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4479) DNA_pol_E_B PF04042.11 gi|84490361|ref|YP_448593.1| - 2.4e-15 56.3 0.0 5.3e-15 55.2 0.0 1.6 2 0 0 2 2 2 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|84490361|ref|YP_448593.1| - 6.5e-12 45.5 0.7 2.6e-11 43.5 0.1 2.0 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|84490361|ref|YP_448593.1| - 8.3e-08 31.8 4.1 8.3e-08 31.8 2.8 2.4 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase FF PF01846.14 gi|84490361|ref|YP_448593.1| - 0.062 13.2 0.1 0.37 10.7 0.1 2.4 2 0 0 2 2 2 0 FF domain tRNA_anti-codon PF01336.20 gi|84490361|ref|YP_448593.1| - 0.083 12.7 0.3 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain DUF4170 PF13773.1 gi|84490361|ref|YP_448593.1| - 0.095 12.6 0.1 0.76 9.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4170) DUF771 PF05595.6 gi|84490361|ref|YP_448593.1| - 4.3 7.3 14.5 2.3 8.2 0.9 3.6 4 1 1 5 5 5 0 Domain of unknown function (DUF771) Aldolase_II PF00596.16 gi|84490362|ref|YP_448594.1| - 1.3e-43 148.8 0.0 1.4e-43 148.6 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain YmgB PF10798.3 gi|84490362|ref|YP_448594.1| - 0.14 11.9 0.9 0.33 10.7 0.6 1.7 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR YolD PF08863.5 gi|84490362|ref|YP_448594.1| - 0.55 10.1 3.3 1.6 8.5 2.3 1.8 1 0 0 1 1 1 0 YolD-like protein UPF0147 PF03685.8 gi|84490363|ref|YP_448595.1| - 2.2e-35 120.3 3.9 2.5e-35 120.2 2.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.7 gi|84490363|ref|YP_448595.1| - 0.012 15.6 0.1 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) HPS3_C PF14763.1 gi|84490363|ref|YP_448595.1| - 0.078 11.9 0.1 0.079 11.9 0.1 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, C-terminal CbiG_N PF11760.3 gi|84490364|ref|YP_448596.1| - 1e-34 118.0 0.4 1.8e-34 117.3 0.3 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.11 gi|84490364|ref|YP_448596.1| - 1.5e-31 109.1 0.0 8.5e-30 103.5 0.0 2.2 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus CbiG_mid PF11761.3 gi|84490364|ref|YP_448596.1| - 8.3e-06 25.9 0.0 1.6e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Cobalamin biosynthesis central region CobD_Cbib PF03186.8 gi|84490365|ref|YP_448597.1| - 1.4e-98 329.5 0.6 1.7e-98 329.3 0.4 1.1 1 0 0 1 1 1 1 CobD/Cbib protein YniB PF14002.1 gi|84490365|ref|YP_448597.1| - 0.015 14.7 8.9 0.14 11.6 0.2 3.0 3 0 0 3 3 3 0 YniB-like protein DUF4363 PF14276.1 gi|84490365|ref|YP_448597.1| - 0.019 14.6 1.1 0.019 14.6 0.8 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4363) DUF2057 PF09829.4 gi|84490365|ref|YP_448597.1| - 0.11 12.1 0.1 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) Phlebovirus_G1 PF07243.6 gi|84490365|ref|YP_448597.1| - 0.2 9.7 2.0 0.33 9.0 1.4 1.3 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Tmemb_9 PF05434.6 gi|84490365|ref|YP_448597.1| - 4.3 7.0 14.3 6 6.5 1.5 2.4 2 0 0 2 2 2 0 TMEM9