#                                                                       --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                   accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------         -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|84488832|ref|YP_447064.1|	-	9.2e-19	67.2	0.4	2.7e-18	65.7	0.4	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|84488832|ref|YP_447064.1|	-	5.9e-12	46.0	0.0	1.2e-11	45.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|84488832|ref|YP_447064.1|	-	7e-06	25.6	0.0	1.3e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	TniB	protein
AAA_16	PF13191.6	gi|84488832|ref|YP_447064.1|	-	1.1e-05	25.9	0.0	4.6e-05	23.9	0.0	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|84488832|ref|YP_447064.1|	-	0.00012	22.6	0.0	0.00025	21.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
E2F_TDP	PF02319.20	gi|84488832|ref|YP_447064.1|	-	0.00081	19.4	0.3	0.0047	16.9	0.3	2.5	1	1	0	1	1	1	1	E2F/DP	family	winged-helix	DNA-binding	domain
AAA_5	PF07728.14	gi|84488832|ref|YP_447064.1|	-	0.0039	17.2	0.0	0.008	16.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
ATPase_2	PF01637.18	gi|84488832|ref|YP_447064.1|	-	0.01	15.8	0.2	0.01	15.8	0.2	1.7	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
B-block_TFIIIC	PF04182.12	gi|84488832|ref|YP_447064.1|	-	0.016	15.3	0.0	0.06	13.5	0.0	2.0	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
AAA_18	PF13238.6	gi|84488832|ref|YP_447064.1|	-	0.019	15.5	0.1	0.088	13.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|84488832|ref|YP_447064.1|	-	0.037	13.2	0.7	0.049	12.8	0.0	1.5	2	0	0	2	2	2	0	NB-ARC	domain
DEAD	PF00270.29	gi|84488832|ref|YP_447064.1|	-	0.085	12.6	1.2	4.6	7.0	0.0	2.9	3	0	0	3	3	3	0	DEAD/DEAH	box	helicase
HTH_29	PF13551.6	gi|84488832|ref|YP_447064.1|	-	0.11	12.5	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
Cupin_2	PF07883.11	gi|84488833|ref|YP_447065.1|	-	1e-09	38.0	0.0	1.5e-09	37.4	0.0	1.3	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.19	gi|84488833|ref|YP_447065.1|	-	1.1e-05	25.3	0.0	1.4e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Lyx_isomer	PF07385.12	gi|84488833|ref|YP_447065.1|	-	0.0024	17.2	0.1	0.0025	17.1	0.1	1.0	1	0	0	1	1	1	1	D-lyxose	isomerase
EutQ	PF06249.12	gi|84488833|ref|YP_447065.1|	-	0.0034	17.2	0.1	0.004	16.9	0.1	1.2	1	1	0	1	1	1	1	Ethanolamine	utilisation	protein	EutQ
Cupin_3	PF05899.12	gi|84488833|ref|YP_447065.1|	-	0.0084	15.8	0.0	0.027	14.2	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF861)
ARD	PF03079.14	gi|84488833|ref|YP_447065.1|	-	0.01	16.1	0.1	0.013	15.6	0.1	1.3	1	1	0	1	1	1	0	ARD/ARD'	family
Ectoine_synth	PF06339.12	gi|84488833|ref|YP_447065.1|	-	0.035	14.3	0.0	0.044	14.0	0.0	1.4	1	1	0	1	1	1	0	Ectoine	synthase
MannoseP_isomer	PF01050.18	gi|84488833|ref|YP_447065.1|	-	0.039	13.9	0.0	0.065	13.1	0.0	1.4	1	1	0	1	1	1	0	Mannose-6-phosphate	isomerase
CENP-C_C	PF11699.8	gi|84488833|ref|YP_447065.1|	-	0.068	13.4	0.0	0.08	13.2	0.0	1.2	1	0	0	1	1	1	0	Mif2/CENP-C	like
OTCace_N	PF02729.21	gi|84488834|ref|YP_447066.1|	-	8.3e-46	155.7	0.0	1.8e-45	154.5	0.0	1.5	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|84488834|ref|YP_447066.1|	-	9.8e-33	113.5	0.0	6.4e-32	110.8	0.0	1.9	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
GCD14	PF08704.10	gi|84488835|ref|YP_447067.1|	-	3.3e-30	105.6	0.0	6.9e-27	94.7	0.0	2.3	2	1	1	3	3	3	2	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.6	gi|84488835|ref|YP_447067.1|	-	2.6e-12	46.8	0.0	3.1e-11	43.3	0.0	2.1	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|84488835|ref|YP_447067.1|	-	2.9e-09	37.5	0.0	1.7e-08	35.0	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.19	gi|84488835|ref|YP_447067.1|	-	2.4e-07	30.7	0.0	3e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.12	gi|84488835|ref|YP_447067.1|	-	1.3e-06	29.0	0.0	6.5e-06	26.7	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|84488835|ref|YP_447067.1|	-	2.8e-05	23.6	0.0	7.8e-05	22.1	0.0	1.6	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_4	PF02390.17	gi|84488835|ref|YP_447067.1|	-	0.00042	19.8	0.0	0.013	14.9	0.0	2.3	1	1	0	1	1	1	1	Putative	methyltransferase
RrnaAD	PF00398.20	gi|84488835|ref|YP_447067.1|	-	0.00071	18.7	0.0	0.0015	17.7	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
GCD14_N	PF14801.6	gi|84488835|ref|YP_447067.1|	-	0.0015	18.4	0.1	0.0031	17.3	0.1	1.6	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit	N-term
Methyltransf_3	PF01596.17	gi|84488835|ref|YP_447067.1|	-	0.0036	16.5	0.1	0.0083	15.3	0.1	1.6	1	1	0	1	1	1	1	O-methyltransferase
Methyltransf_24	PF13578.6	gi|84488835|ref|YP_447067.1|	-	0.0049	17.9	0.0	0.013	16.5	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|84488835|ref|YP_447067.1|	-	0.0064	16.1	0.0	0.015	14.9	0.0	1.6	1	1	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_12	PF08242.12	gi|84488835|ref|YP_447067.1|	-	0.0089	16.8	0.0	0.027	15.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Endonuc_subdom	PF09062.10	gi|84488835|ref|YP_447067.1|	-	0.099	13.5	1.7	6	7.8	0.1	2.7	2	1	0	2	2	2	0	PI-PfuI	Endonuclease	subdomain
Methyltransf_8	PF05148.15	gi|84488835|ref|YP_447067.1|	-	0.15	11.9	0.0	0.2	11.5	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	methyltransferase
DUF3427	PF11907.8	gi|84488836|ref|YP_447068.1|	-	5.2e-78	262.2	24.2	5.2e-78	262.2	24.2	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3427)
ResIII	PF04851.15	gi|84488836|ref|YP_447068.1|	-	2.6e-33	115.4	0.4	2.6e-33	115.4	0.4	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SWI2_SNF2	PF18766.1	gi|84488836|ref|YP_447068.1|	-	2.4e-12	47.0	1.8	4e-12	46.3	0.2	2.0	2	0	0	2	2	2	1	SWI2/SNF2	ATPase
PLDc_2	PF13091.6	gi|84488836|ref|YP_447068.1|	-	3.4e-12	46.4	0.2	3.4e-12	46.4	0.2	2.6	3	0	0	3	3	3	1	PLD-like	domain
Helicase_C	PF00271.31	gi|84488836|ref|YP_447068.1|	-	3.4e-12	46.7	0.8	3.4e-12	46.7	0.8	3.4	4	1	0	4	4	4	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|84488836|ref|YP_447068.1|	-	1.6e-07	31.3	0.0	5.3e-07	29.6	0.0	1.9	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
NUDIX	PF00293.28	gi|84488837|ref|YP_447069.1|	-	3.4e-16	59.5	0.0	3.7e-16	59.3	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.6	gi|84488837|ref|YP_447069.1|	-	8.3e-14	51.5	0.0	9.5e-14	51.3	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
Helicase_C	PF00271.31	gi|84488838|ref|YP_447070.1|	-	6.2e-25	87.7	4.6	3.4e-24	85.3	0.2	3.3	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ERCC4	PF02732.15	gi|84488838|ref|YP_447070.1|	-	1.1e-24	87.4	0.3	1.1e-24	87.4	0.3	4.0	4	1	0	4	4	4	1	ERCC4	domain
DEAD	PF00270.29	gi|84488838|ref|YP_447070.1|	-	6.8e-23	81.3	3.0	1.3e-20	74.0	0.1	3.6	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|84488838|ref|YP_447070.1|	-	4.1e-20	72.5	0.1	4.1e-20	72.5	0.1	4.0	4	2	1	5	5	4	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.6	gi|84488838|ref|YP_447070.1|	-	6.6e-12	45.9	0.0	2.2e-11	44.2	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|84488838|ref|YP_447070.1|	-	2.9e-10	40.1	0.0	1e-09	38.4	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|84488838|ref|YP_447070.1|	-	1.1e-08	34.6	0.0	2e-05	24.2	0.0	2.7	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|84488838|ref|YP_447070.1|	-	0.00012	22.3	0.1	0.0034	17.6	0.1	3.1	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
AAA_22	PF13401.6	gi|84488838|ref|YP_447070.1|	-	0.0018	18.5	0.1	0.016	15.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
PhoH	PF02562.16	gi|84488838|ref|YP_447070.1|	-	0.022	14.2	0.5	0.054	13.0	0.1	1.9	2	0	0	2	2	2	0	PhoH-like	protein
5_3_exonuc	PF01367.20	gi|84488838|ref|YP_447070.1|	-	0.028	15.0	11.5	0.17	12.5	0.0	4.7	4	2	1	5	5	5	0	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_8	PF14716.6	gi|84488838|ref|YP_447070.1|	-	0.095	13.1	0.1	9.8	6.6	0.1	3.0	1	1	1	2	2	2	0	Helix-hairpin-helix	domain
Sld5	PF05916.11	gi|84488838|ref|YP_447070.1|	-	0.19	12.2	1.5	1.9	9.0	0.1	2.9	3	0	0	3	3	3	0	GINS	complex	protein
DUF521	PF04412.13	gi|84488839|ref|YP_447071.1|	-	2.5e-157	523.7	0.6	2.8e-157	523.5	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Terminase_6C	PF17289.2	gi|84488839|ref|YP_447071.1|	-	0.0072	16.4	0.0	0.012	15.7	0.0	1.3	1	0	0	1	1	1	1	Terminase	RNaseH-like	domain
Cons_hypoth95	PF03602.15	gi|84488839|ref|YP_447071.1|	-	0.072	12.7	0.0	0.11	12.1	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DoxA	PF07680.11	gi|84488839|ref|YP_447071.1|	-	0.1	12.5	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	TQO	small	subunit	DoxA
DHHA1	PF02272.19	gi|84488840|ref|YP_447072.1|	-	2.2e-15	57.3	0.1	5.8e-15	55.9	0.1	1.8	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.20	gi|84488840|ref|YP_447072.1|	-	0.0021	18.3	0.1	0.005	17.1	0.1	1.6	1	0	0	1	1	1	1	DHH	family
Ribosomal_S15	PF00312.22	gi|84488841|ref|YP_447073.1|	-	1.1e-18	67.2	0.2	1.8e-18	66.5	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S15
Ribosomal_S13_N	PF08069.12	gi|84488841|ref|YP_447073.1|	-	1.4e-16	60.2	0.1	2.4e-16	59.5	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
DUF2828	PF11443.8	gi|84488841|ref|YP_447073.1|	-	0.05	11.7	0.0	0.052	11.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2828)
PMBR	PF09373.10	gi|84488841|ref|YP_447073.1|	-	0.12	12.6	0.3	5.1	7.4	0.2	2.6	2	0	0	2	2	2	0	Pseudomurein-binding	repeat
Ham1p_like	PF01725.16	gi|84488842|ref|YP_447074.1|	-	3.2e-49	167.4	0.0	3.5e-49	167.3	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
Peptidase_M22	PF00814.25	gi|84488844|ref|YP_447076.1|	-	1.7e-88	296.8	0.0	2.5e-88	296.3	0.0	1.1	1	0	0	1	1	1	1	Glycoprotease	family
RIO1	PF01163.22	gi|84488844|ref|YP_447076.1|	-	1e-10	41.5	0.2	1.8e-10	40.8	0.2	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.25	gi|84488844|ref|YP_447076.1|	-	1.2e-08	34.7	2.5	1.8e-08	34.1	2.5	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Kdo	PF06293.14	gi|84488844|ref|YP_447076.1|	-	1.1e-06	28.2	0.0	1.7e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.23	gi|84488844|ref|YP_447076.1|	-	3.4e-05	23.9	0.0	0.00011	22.2	0.0	1.7	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.17	gi|84488844|ref|YP_447076.1|	-	4.5e-05	22.9	0.1	7.2e-05	22.2	0.1	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
Choline_kinase	PF01633.20	gi|84488844|ref|YP_447076.1|	-	0.065	12.8	0.2	0.11	12.1	0.2	1.3	1	0	0	1	1	1	0	Choline/ethanolamine	kinase
EcKinase	PF02958.20	gi|84488844|ref|YP_447076.1|	-	0.081	12.2	0.1	0.13	11.5	0.1	1.3	1	0	0	1	1	1	0	Ecdysteroid	kinase
BacA	PF02673.18	gi|84488845|ref|YP_447077.1|	-	2.7e-82	276.4	16.9	3.1e-82	276.2	16.9	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
Pox_A14	PF05767.12	gi|84488845|ref|YP_447077.1|	-	0.12	12.6	0.1	0.12	12.6	0.1	2.9	3	0	0	3	3	3	0	Poxvirus	virion	envelope	protein	A14
DUF3188	PF11384.8	gi|84488845|ref|YP_447077.1|	-	0.97	9.2	6.1	4.8	7.0	0.0	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3188)
Gram_pos_anchor	PF00746.21	gi|84488845|ref|YP_447077.1|	-	1.5	8.8	3.4	1.6	8.7	0.0	2.7	3	0	0	3	3	3	0	LPXTG	cell	wall	anchor	motif
Aminotran_4	PF01063.19	gi|84488846|ref|YP_447078.1|	-	2.6e-47	161.6	0.0	3e-47	161.3	0.0	1.0	1	0	0	1	1	1	1	Amino-transferase	class	IV
DUF2981	PF11200.8	gi|84488847|ref|YP_447079.1|	-	0.33	10.6	7.9	0.38	10.4	7.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2981)
Presenilin	PF01080.17	gi|84488847|ref|YP_447079.1|	-	8.9	5.0	8.4	13	4.4	8.4	1.4	1	0	0	1	1	1	0	Presenilin
DDE_Tnp_IS240	PF13610.6	gi|84488848|ref|YP_447080.1|	-	0.0012	19.0	3.2	0.0012	19.0	3.2	2.9	2	2	2	4	4	4	1	DDE	domain
zf-CHY	PF05495.12	gi|84488848|ref|YP_447080.1|	-	0.019	15.5	2.9	0.057	13.9	2.9	1.8	1	0	0	1	1	1	0	CHY	zinc	finger
Cytochrome_C7	PF14522.6	gi|84488848|ref|YP_447080.1|	-	0.023	14.7	3.4	0.067	13.2	3.4	1.8	1	0	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
HTH_40	PF14493.6	gi|84488848|ref|YP_447080.1|	-	0.025	15.0	2.3	0.025	15.0	2.3	3.2	2	1	1	3	3	3	0	Helix-turn-helix	domain
Zn-ribbon_8	PF09723.10	gi|84488848|ref|YP_447080.1|	-	0.093	12.9	1.6	3.1	8.0	0.2	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
CpXC	PF14353.6	gi|84488848|ref|YP_447080.1|	-	0.39	10.8	4.9	0.95	9.5	3.3	2.5	2	1	0	2	2	2	0	CpXC	protein
DUF1367	PF07105.11	gi|84488848|ref|YP_447080.1|	-	0.48	10.1	5.2	1.2	8.7	0.6	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1367)
zf-3CxxC	PF13695.6	gi|84488848|ref|YP_447080.1|	-	0.98	9.9	9.1	0.51	10.8	1.8	3.2	2	1	0	2	2	2	0	Zinc-binding	domain
zf-ISL3	PF14690.6	gi|84488848|ref|YP_447080.1|	-	1.5	9.5	13.4	6.4	7.5	13.4	2.1	1	1	0	1	1	1	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS1595	PF12760.7	gi|84488848|ref|YP_447080.1|	-	4.8	7.2	11.2	13	5.8	11.2	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Mrr_cat	PF04471.12	gi|84488849|ref|YP_447081.1|	-	1.4e-14	54.0	0.1	2e-14	53.6	0.1	1.2	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|84488849|ref|YP_447081.1|	-	0.0015	18.4	0.4	0.0028	17.6	0.4	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
SurE	PF01975.17	gi|84488850|ref|YP_447082.1|	-	2.2e-52	177.7	0.3	3.1e-52	177.2	0.3	1.2	1	0	0	1	1	1	1	Survival	protein	SurE
Peptidase_M60_C	PF18630.1	gi|84488851|ref|YP_447083.1|	-	0.04	14.0	0.0	0.11	12.7	0.0	1.8	1	1	0	1	1	1	0	Peptidase	M60	C-terminal	domain
IlvN	PF07991.12	gi|84488852|ref|YP_447084.1|	-	2.9e-72	241.6	0.6	4.7e-72	241.0	0.6	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IlvC	PF01450.19	gi|84488852|ref|YP_447084.1|	-	2.1e-58	196.7	0.5	3.4e-58	196.0	0.5	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|84488852|ref|YP_447084.1|	-	2.2e-05	24.7	0.0	4.3e-05	23.7	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.17	gi|84488852|ref|YP_447084.1|	-	2.6e-05	24.7	0.1	0.0001	22.8	0.1	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|84488852|ref|YP_447084.1|	-	4.2e-05	23.0	0.0	6.8e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.21	gi|84488852|ref|YP_447084.1|	-	6.4e-05	23.1	0.0	0.00015	21.9	0.0	1.6	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Leukocidin	PF07968.12	gi|84488852|ref|YP_447084.1|	-	0.0033	17.4	0.0	0.0066	16.4	0.0	1.5	1	0	0	1	1	1	1	Leukocidin/Hemolysin	toxin	family
Rx_N	PF18052.1	gi|84488853|ref|YP_447085.1|	-	0.11	12.8	0.1	0.23	11.7	0.1	1.5	1	0	0	1	1	1	0	Rx	N-terminal	domain
DAG_kinase_N	PF14513.6	gi|84488853|ref|YP_447085.1|	-	0.49	10.6	6.1	0.23	11.7	3.4	2.0	2	1	0	2	2	2	0	Diacylglycerol	kinase	N-terminus
Cas_Cas4	PF01930.17	gi|84488854|ref|YP_447086.1|	-	8.1e-10	39.0	1.5	2.6e-09	37.4	1.5	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|84488854|ref|YP_447086.1|	-	1.9e-07	31.3	0.4	4.1e-07	30.2	0.3	1.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Exo5	PF09810.9	gi|84488854|ref|YP_447086.1|	-	8.5e-07	28.8	1.2	0.00034	20.2	0.0	2.3	2	0	0	2	2	2	2	Exonuclease	V	-	a	5'	deoxyribonuclease
Csa1	PF06023.12	gi|84488854|ref|YP_447086.1|	-	0.017	14.5	0.1	0.067	12.5	0.0	1.8	2	0	0	2	2	2	0	CRISPR-associated	exonuclease	Csa1
Dna2	PF08696.11	gi|84488854|ref|YP_447086.1|	-	0.02	14.7	1.6	4	7.2	0.0	2.6	2	1	1	3	3	3	0	DNA	replication	factor	Dna2
ALS_ss_C	PF10369.9	gi|84488855|ref|YP_447087.1|	-	5.1e-30	103.5	0.6	2.9e-28	97.9	0.0	2.2	2	0	0	2	2	2	1	Small	subunit	of	acetolactate	synthase
ACT_5	PF13710.6	gi|84488855|ref|YP_447087.1|	-	2.1e-17	62.7	0.2	3.8e-17	61.9	0.2	1.5	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.25	gi|84488855|ref|YP_447087.1|	-	2.3e-15	56.1	0.1	4.4e-15	55.2	0.1	1.5	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.6	gi|84488855|ref|YP_447087.1|	-	2.2e-06	28.2	0.8	4.1e-06	27.3	0.8	1.4	1	0	0	1	1	1	1	ACT	domain
Saccharop_dh_N	PF04455.12	gi|84488855|ref|YP_447087.1|	-	0.00066	20.0	0.3	0.01	16.2	0.1	2.3	1	1	1	2	2	2	1	LOR/SDH	bifunctional	enzyme	conserved	region
YbbR	PF07949.12	gi|84488855|ref|YP_447087.1|	-	0.15	12.4	5.3	3.7	8.0	4.0	2.3	1	1	1	2	2	2	0	YbbR-like	protein
SapB_1	PF05184.15	gi|84488855|ref|YP_447087.1|	-	0.66	10.1	3.1	7.3	6.7	0.3	2.4	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
TPP_enzyme_N	PF02776.18	gi|84488856|ref|YP_447088.1|	-	1.2e-55	187.8	0.0	8.7e-54	181.7	0.0	2.7	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|84488856|ref|YP_447088.1|	-	1.7e-52	176.8	0.1	9.6e-52	174.3	0.1	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.21	gi|84488856|ref|YP_447088.1|	-	3.1e-52	176.4	0.7	6.7e-51	172.1	0.0	2.7	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
XFP_N	PF09364.10	gi|84488856|ref|YP_447088.1|	-	0.036	12.9	0.3	0.36	9.6	0.0	2.4	3	0	0	3	3	3	0	XFP	N-terminal	domain
E1_dh	PF00676.20	gi|84488856|ref|YP_447088.1|	-	0.078	11.9	0.5	0.8	8.6	0.0	2.1	2	0	0	2	2	2	0	Dehydrogenase	E1	component
ALS_ss_C	PF10369.9	gi|84488858|ref|YP_447090.1|	-	5.2e-30	103.5	0.6	2.9e-28	97.9	0.0	2.2	2	0	0	2	2	2	1	Small	subunit	of	acetolactate	synthase
ACT_5	PF13710.6	gi|84488858|ref|YP_447090.1|	-	2.1e-17	62.7	0.2	3.8e-17	61.9	0.2	1.4	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.25	gi|84488858|ref|YP_447090.1|	-	2.3e-15	56.1	0.1	4.4e-15	55.2	0.1	1.5	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.6	gi|84488858|ref|YP_447090.1|	-	1.9e-06	28.4	0.4	3.7e-06	27.4	0.4	1.4	1	0	0	1	1	1	1	ACT	domain
Saccharop_dh_N	PF04455.12	gi|84488858|ref|YP_447090.1|	-	0.00067	20.0	0.3	0.01	16.2	0.1	2.3	1	1	1	2	2	2	1	LOR/SDH	bifunctional	enzyme	conserved	region
YbbR	PF07949.12	gi|84488858|ref|YP_447090.1|	-	0.15	12.4	5.3	3.7	8.0	4.0	2.3	1	1	1	2	2	2	0	YbbR-like	protein
SapB_1	PF05184.15	gi|84488858|ref|YP_447090.1|	-	0.66	10.1	3.1	7.3	6.7	0.3	2.4	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
TPP_enzyme_N	PF02776.18	gi|84488859|ref|YP_447091.1|	-	1e-56	191.2	0.0	4.3e-55	186.0	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|84488859|ref|YP_447091.1|	-	4.2e-50	169.5	0.1	2.9e-49	166.8	0.1	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|84488859|ref|YP_447091.1|	-	2.1e-48	163.6	0.1	2.9e-47	159.9	0.1	2.3	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
CO_dh	PF02552.16	gi|84488859|ref|YP_447091.1|	-	0.04	13.7	0.0	0.11	12.3	0.0	1.8	1	0	0	1	1	1	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
LTD	PF00932.19	gi|84488859|ref|YP_447091.1|	-	0.082	13.3	0.1	0.18	12.2	0.1	1.6	1	0	0	1	1	1	0	Lamin	Tail	Domain
E1_dh	PF00676.20	gi|84488859|ref|YP_447091.1|	-	0.13	11.2	0.2	0.55	9.1	0.0	2.0	2	0	0	2	2	2	0	Dehydrogenase	E1	component
GARS_A	PF01071.19	gi|84488860|ref|YP_447092.1|	-	6.6e-66	221.8	1.0	9.6e-66	221.3	0.1	1.7	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.15	gi|84488860|ref|YP_447092.1|	-	4.5e-26	91.5	0.1	1.1e-25	90.2	0.1	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.16	gi|84488860|ref|YP_447092.1|	-	2.8e-09	37.1	0.2	9.3e-09	35.5	0.2	2.0	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_3	PF02655.14	gi|84488860|ref|YP_447092.1|	-	4.6e-05	23.5	0.0	0.00029	20.9	0.0	2.3	2	1	0	2	2	2	1	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|84488860|ref|YP_447092.1|	-	7.3e-05	22.4	0.1	0.00029	20.5	0.0	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|84488860|ref|YP_447092.1|	-	0.0034	16.9	0.0	0.0087	15.6	0.0	1.7	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_2	PF08442.10	gi|84488860|ref|YP_447092.1|	-	0.0078	15.8	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|84488860|ref|YP_447092.1|	-	0.036	13.3	0.0	0.12	11.6	0.0	1.8	2	0	0	2	2	2	0	Sugar-transfer	associated	ATP-grasp
ATP-grasp	PF02222.22	gi|84488860|ref|YP_447092.1|	-	0.037	13.6	0.1	0.13	11.8	0.0	1.9	2	0	0	2	2	2	0	ATP-grasp	domain
SPOB_a	PF14689.6	gi|84488860|ref|YP_447092.1|	-	5	6.9	5.0	23	4.8	0.1	3.4	3	0	0	3	3	3	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
OTCace	PF00185.24	gi|84488861|ref|YP_447093.1|	-	3.7e-61	205.8	0.7	5e-61	205.4	0.7	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|84488861|ref|YP_447093.1|	-	1.2e-45	155.1	0.0	2.2e-45	154.3	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
Tfb2_C	PF18307.1	gi|84488861|ref|YP_447093.1|	-	0.027	14.9	0.0	0.081	13.4	0.0	1.8	1	0	0	1	1	1	0	Transcription	factor	Tfb2	(p52)	C-terminal	domain
Glyco_hydro_4	PF02056.16	gi|84488861|ref|YP_447093.1|	-	0.09	12.3	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	Family	4	glycosyl	hydrolase
PALP	PF00291.25	gi|84488861|ref|YP_447093.1|	-	0.14	11.5	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
His_biosynth	PF00977.21	gi|84488862|ref|YP_447094.1|	-	8.8e-84	280.5	0.1	1e-83	280.3	0.1	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NMO	PF03060.15	gi|84488862|ref|YP_447094.1|	-	2.1e-07	30.6	0.0	0.0006	19.3	0.0	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
ThiG	PF05690.14	gi|84488862|ref|YP_447094.1|	-	1.6e-06	27.6	0.0	0.016	14.5	0.0	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
G3P_antiterm	PF04309.12	gi|84488862|ref|YP_447094.1|	-	7.2e-06	25.5	0.1	0.011	15.1	0.1	2.2	2	0	0	2	2	2	2	Glycerol-3-phosphate	responsive	antiterminator
Dus	PF01207.17	gi|84488862|ref|YP_447094.1|	-	0.00017	20.8	0.1	0.14	11.2	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
TMP-TENI	PF02581.17	gi|84488862|ref|YP_447094.1|	-	0.0012	18.2	0.1	0.53	9.6	0.0	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase
DHO_dh	PF01180.21	gi|84488862|ref|YP_447094.1|	-	0.002	17.4	0.0	0.33	10.1	0.0	2.1	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
IMPDH	PF00478.25	gi|84488862|ref|YP_447094.1|	-	0.0073	15.3	0.1	2.5	7.0	0.0	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.12	gi|84488862|ref|YP_447094.1|	-	0.038	13.2	0.2	2.8	7.0	0.0	2.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF561)
Proteasome	PF00227.26	gi|84488863|ref|YP_447095.1|	-	3e-05	23.6	0.0	0.00012	21.7	0.1	1.9	2	0	0	2	2	2	1	Proteasome	subunit
ATP-grasp_6	PF18419.1	gi|84488863|ref|YP_447095.1|	-	0.019	14.6	0.1	0.046	13.3	0.1	1.7	1	0	0	1	1	1	0	ATP-grasp-like	domain
HhH-GPD	PF00730.25	gi|84488864|ref|YP_447096.1|	-	3.1e-11	43.7	0.0	4.5e-11	43.2	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
OGG_N	PF07934.12	gi|84488864|ref|YP_447096.1|	-	7.5e-11	42.2	0.4	1.4e-10	41.3	0.4	1.4	1	0	0	1	1	1	1	8-oxoguanine	DNA	glycosylase,	N-terminal	domain
HHH	PF00633.23	gi|84488864|ref|YP_447096.1|	-	7.2e-05	22.4	0.0	0.00016	21.4	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Pro_isomerase	PF00160.21	gi|84488865|ref|YP_447097.1|	-	1.7e-47	161.6	0.2	2e-47	161.4	0.2	1.0	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
Helicase_C_2	PF13307.6	gi|84488866|ref|YP_447098.1|	-	5.7e-19	68.9	0.1	2.2e-18	67.0	0.0	2.1	2	0	0	2	2	2	1	Helicase	C-terminal	domain
DEAD_2	PF06733.15	gi|84488866|ref|YP_447098.1|	-	6.6e-09	35.6	5.2	7.3e-09	35.5	3.0	2.3	2	0	0	2	2	2	1	DEAD_2
ResIII	PF04851.15	gi|84488866|ref|YP_447098.1|	-	6.7e-09	36.0	1.5	6.7e-09	36.0	1.5	1.9	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|84488866|ref|YP_447098.1|	-	4.1e-05	23.4	0.6	0.43	10.3	0.0	3.2	3	0	0	3	3	3	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|84488866|ref|YP_447098.1|	-	4.5e-05	23.8	0.0	0.00018	21.8	0.0	2.1	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
AAA_16	PF13191.6	gi|84488866|ref|YP_447098.1|	-	0.0033	17.8	0.0	0.0073	16.7	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
Duffy_binding	PF05424.11	gi|84488866|ref|YP_447098.1|	-	0.007	16.4	2.0	0.021	14.9	2.0	1.8	1	0	0	1	1	1	1	Duffy	binding	domain
AAA_30	PF13604.6	gi|84488866|ref|YP_447098.1|	-	0.018	14.8	0.1	0.081	12.6	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.6	gi|84488866|ref|YP_447098.1|	-	0.023	15.0	0.2	7.7	6.8	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.14	gi|84488866|ref|YP_447098.1|	-	0.033	14.2	0.1	11	6.0	0.0	2.5	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.6	gi|84488866|ref|YP_447098.1|	-	0.058	13.7	0.9	0.3	11.4	0.9	2.1	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|84488866|ref|YP_447098.1|	-	0.11	11.9	0.4	3.4	7.0	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
Aminotran_3	PF00202.21	gi|84488867|ref|YP_447099.1|	-	2.7e-119	398.5	0.4	3.1e-119	398.3	0.4	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|84488867|ref|YP_447099.1|	-	7.7e-09	35.2	0.0	9.9e-09	34.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|84488867|ref|YP_447099.1|	-	5.3e-05	22.7	0.0	0.00011	21.7	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|84488867|ref|YP_447099.1|	-	6.1e-05	22.1	0.0	0.00039	19.5	0.0	1.8	1	1	1	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|84488867|ref|YP_447099.1|	-	0.01	14.4	0.0	0.017	13.7	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|84488867|ref|YP_447099.1|	-	0.027	13.8	0.0	0.037	13.3	0.0	1.4	1	0	0	1	1	1	0	Beta-eliminating	lyase
Amidinotransf	PF02274.17	gi|84488867|ref|YP_447099.1|	-	0.084	11.9	0.0	0.16	11.0	0.0	1.4	1	0	0	1	1	1	0	Amidinotransferase
TP_methylase	PF00590.20	gi|84488868|ref|YP_447100.1|	-	4.6e-50	170.5	0.0	5.4e-50	170.3	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
ApbA	PF02558.16	gi|84488868|ref|YP_447100.1|	-	0.034	13.8	0.0	0.057	13.1	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Glycos_transf_1	PF00534.20	gi|84488869|ref|YP_447101.1|	-	2.5e-22	79.2	0.5	2.5e-22	79.2	0.5	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488869|ref|YP_447101.1|	-	4.3e-18	66.0	0.0	6.2e-18	65.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|84488869|ref|YP_447101.1|	-	0.13	12.7	0.0	0.48	10.9	0.0	1.9	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
NUC	PF18510.1	gi|84488870|ref|YP_447102.1|	-	0.014	15.8	0.8	0.017	15.6	0.8	1.2	1	0	0	1	1	1	0	Nuclease	domain
CorA	PF01544.18	gi|84488870|ref|YP_447102.1|	-	0.058	12.7	0.8	0.067	12.5	0.8	1.0	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
ATP-synt_J	PF04911.12	gi|84488871|ref|YP_447103.1|	-	0.26	10.9	0.0	0.37	10.4	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	j	chain
Glycos_transf_2	PF00535.26	gi|84488872|ref|YP_447104.1|	-	1.4e-12	47.7	1.3	7.7e-12	45.3	1.3	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84488872|ref|YP_447104.1|	-	7.3e-12	45.7	0.0	1.9e-11	44.3	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|84488872|ref|YP_447104.1|	-	2.7e-11	43.8	0.3	3.6e-11	43.4	0.3	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.6	gi|84488872|ref|YP_447104.1|	-	3.5e-08	33.1	0.0	5e-08	32.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_5	PF13712.6	gi|84488872|ref|YP_447104.1|	-	2.7e-05	24.0	1.0	7.9e-05	22.4	1.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family
NTP_transferase	PF00483.23	gi|84488872|ref|YP_447104.1|	-	0.12	11.9	0.1	0.23	11.0	0.0	1.5	2	0	0	2	2	2	0	Nucleotidyl	transferase
Chlam_PMP	PF02415.17	gi|84488873|ref|YP_447105.1|	-	0.00015	22.0	121.8	0.042	14.3	1.1	19.4	19	1	0	19	19	19	14	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Glycos_transf_1	PF00534.20	gi|84488874|ref|YP_447106.1|	-	2.7e-35	121.5	0.0	4.8e-35	120.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488874|ref|YP_447106.1|	-	4.9e-22	78.8	0.0	6.9e-22	78.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|84488874|ref|YP_447106.1|	-	1.5e-09	38.1	0.0	3.5e-09	36.9	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488874|ref|YP_447106.1|	-	1.7e-05	24.9	0.0	0.00024	21.1	0.0	2.6	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|84488874|ref|YP_447106.1|	-	0.052	13.6	0.1	0.17	11.9	0.1	2.0	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
Glycos_transf_2	PF00535.26	gi|84488875|ref|YP_447107.1|	-	1.6e-13	50.9	5.8	1.4e-06	28.3	0.2	2.5	3	0	0	3	3	3	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84488875|ref|YP_447107.1|	-	9.6e-12	45.3	0.0	6.2e-10	39.3	0.0	2.1	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|84488875|ref|YP_447107.1|	-	0.0002	21.3	0.1	0.00027	20.9	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.6	gi|84488875|ref|YP_447107.1|	-	0.00045	20.0	0.9	0.0011	18.7	0.9	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family
Glyco_transf_21	PF13506.6	gi|84488875|ref|YP_447107.1|	-	0.012	15.1	0.0	4	6.9	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
TylF	PF05711.11	gi|84488875|ref|YP_447107.1|	-	0.038	13.3	0.0	1.4	8.2	0.0	2.3	2	0	0	2	2	2	0	Macrocin-O-methyltransferase	(TylF)
NTP_transferase	PF00483.23	gi|84488875|ref|YP_447107.1|	-	0.096	12.3	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	Nucleotidyl	transferase
Big_3_5	PF16640.5	gi|84488876|ref|YP_447108.1|	-	1.6e-50	169.2	83.6	5.5e-13	48.9	12.4	6.5	6	0	0	6	6	6	5	Bacterial	Ig-like	domain	(group	3)
MRP-S35	PF10246.9	gi|84488876|ref|YP_447108.1|	-	1.7e-11	44.0	0.7	0.049	13.6	0.0	4.4	4	0	0	4	4	4	3	Mitochondrial	ribosomal	protein	MRP-S35
Big_7	PF17957.1	gi|84488876|ref|YP_447108.1|	-	9.5e-07	29.5	65.7	0.023	15.5	2.9	6.8	6	0	0	6	6	6	5	Bacterial	Ig	domain
PMBR	PF09373.10	gi|84488876|ref|YP_447108.1|	-	2.7e-06	27.3	0.4	1.7e-05	24.8	0.2	2.6	2	0	0	2	2	2	1	Pseudomurein-binding	repeat
GTP_EFTU_D3	PF03143.17	gi|84488876|ref|YP_447108.1|	-	3.2e-05	24.2	9.8	1.5	9.1	0.1	5.4	5	0	0	5	5	5	1	Elongation	factor	Tu	C-terminal	domain
BTD	PF09270.10	gi|84488876|ref|YP_447108.1|	-	0.024	14.9	14.0	4	7.7	0.1	5.0	5	0	0	5	5	5	0	Beta-trefoil	DNA-binding	domain
DUF1684	PF07920.11	gi|84488876|ref|YP_447108.1|	-	0.038	14.3	8.9	49	4.2	0.0	5.3	5	1	0	5	5	5	0	Protein	of	unknown	function	(DUF1684)
zf_C2H2_ZHX	PF18387.1	gi|84488876|ref|YP_447108.1|	-	0.15	11.7	2.6	32	4.2	0.0	3.6	3	0	0	3	3	3	0	Zinc-fingers	and	homeoboxes	C2H2	finger	domain
Membrane_bind	PF14564.6	gi|84488876|ref|YP_447108.1|	-	0.2	12.1	28.9	19	5.8	0.2	7.7	3	2	4	8	8	7	0	Membrane	binding
Lep_receptor_Ig	PF06328.11	gi|84488876|ref|YP_447108.1|	-	0.54	10.3	22.4	5.9	6.9	0.0	6.2	7	0	0	7	7	7	0	Ig-like	C2-type	domain
adh_short	PF00106.25	gi|84488877|ref|YP_447109.1|	-	3.7e-60	202.8	2.0	4.3e-60	202.5	2.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|84488877|ref|YP_447109.1|	-	1.2e-59	201.7	0.5	1.4e-59	201.5	0.5	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|84488877|ref|YP_447109.1|	-	2.5e-16	60.1	0.2	3.8e-16	59.5	0.2	1.1	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.6	gi|84488877|ref|YP_447109.1|	-	0.00019	21.4	0.2	0.00024	21.0	0.2	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
Epimerase	PF01370.21	gi|84488877|ref|YP_447109.1|	-	0.00033	20.2	0.1	0.00044	19.8	0.1	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.15	gi|84488877|ref|YP_447109.1|	-	0.00033	19.9	0.2	0.00046	19.4	0.2	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
THF_DHG_CYH_C	PF02882.19	gi|84488877|ref|YP_447109.1|	-	0.0086	15.4	0.0	0.027	13.8	0.0	1.9	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
DEAD	PF00270.29	gi|84488877|ref|YP_447109.1|	-	0.011	15.5	0.1	0.023	14.5	0.1	1.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
3HCDH_N	PF02737.18	gi|84488877|ref|YP_447109.1|	-	0.016	15.1	0.1	0.027	14.3	0.1	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3Beta_HSD	PF01073.19	gi|84488877|ref|YP_447109.1|	-	0.1	11.6	0.7	0.15	11.0	0.7	1.3	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RusA	PF05866.11	gi|84488877|ref|YP_447109.1|	-	0.13	12.8	1.5	0.21	12.2	1.5	1.3	1	0	0	1	1	1	0	Endodeoxyribonuclease	RusA
Beta_helix	PF13229.6	gi|84488878|ref|YP_447110.1|	-	6.4e-12	45.6	64.7	8.9e-08	32.1	21.7	13.1	4	4	6	11	11	11	3	Right	handed	beta	helix	region
Big_3_5	PF16640.5	gi|84488878|ref|YP_447110.1|	-	8.2e-08	32.3	1.4	8.2e-08	32.3	1.4	10.2	10	1	0	10	10	10	5	Bacterial	Ig-like	domain	(group	3)
Big_3_4	PF13754.6	gi|84488878|ref|YP_447110.1|	-	0.047	13.4	0.3	0.26	11.1	0.3	2.4	1	0	0	1	1	1	0	Domain	of	unknown	function
POTRA_1	PF08478.10	gi|84488878|ref|YP_447110.1|	-	2.3	8.6	6.8	4.8	7.6	0.9	3.8	3	0	0	3	3	3	0	POTRA	domain,	FtsQ-type
Glycos_transf_1	PF00534.20	gi|84488879|ref|YP_447111.1|	-	2.2e-34	118.5	0.8	2.2e-34	118.5	0.8	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488879|ref|YP_447111.1|	-	1.6e-27	96.5	0.0	3.1e-27	95.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Thioredoxin_8	PF13905.6	gi|84488879|ref|YP_447111.1|	-	9.7e-05	22.6	0.3	0.00037	20.8	0.1	2.1	2	0	0	2	2	2	1	Thioredoxin-like
Glyco_transf_4	PF13439.6	gi|84488879|ref|YP_447111.1|	-	0.082	12.9	0.1	0.28	11.2	0.0	1.9	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
PS_pyruv_trans	PF04230.13	gi|84488879|ref|YP_447111.1|	-	0.16	11.9	3.5	0.44	10.4	0.3	2.4	3	0	0	3	3	3	0	Polysaccharide	pyruvyl	transferase
DUF2206	PF09971.9	gi|84488880|ref|YP_447112.1|	-	7.5e-42	143.4	35.1	6.1e-35	120.7	7.3	4.1	2	2	1	3	3	3	2	Predicted	membrane	protein	(DUF2206)
Glycos_transf_1	PF00534.20	gi|84488881|ref|YP_447113.1|	-	2.6e-35	121.5	0.2	2e-34	118.6	0.1	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488881|ref|YP_447113.1|	-	1.1e-25	90.6	0.0	2.6e-25	89.4	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488881|ref|YP_447113.1|	-	6.1e-13	49.1	0.0	9.9e-13	48.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|84488881|ref|YP_447113.1|	-	4.1e-08	33.8	0.0	5.3e-08	33.5	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|84488881|ref|YP_447113.1|	-	0.00095	19.5	0.0	0.0021	18.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Gamma_PGA_hydro	PF05908.11	gi|84488881|ref|YP_447113.1|	-	0.16	11.4	0.2	0.55	9.6	0.1	1.8	2	0	0	2	2	2	0	Poly-gamma-glutamate	hydrolase
Glycos_transf_1	PF00534.20	gi|84488882|ref|YP_447114.1|	-	5.8e-43	146.4	0.1	1.1e-42	145.5	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488882|ref|YP_447114.1|	-	4.6e-29	101.6	0.0	1.1e-28	100.3	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488882|ref|YP_447114.1|	-	9.9e-25	87.5	0.0	1.3e-24	87.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|84488882|ref|YP_447114.1|	-	6.1e-09	36.0	0.6	1.4e-08	34.8	0.6	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|84488882|ref|YP_447114.1|	-	5.6e-08	33.1	0.0	9.7e-08	32.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|84488882|ref|YP_447114.1|	-	7.6e-08	33.0	0.0	9.7e-08	32.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Ribosomal_S20p	PF01649.18	gi|84488882|ref|YP_447114.1|	-	0.14	12.8	0.9	0.32	11.7	0.9	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S20
Glycos_transf_1	PF00534.20	gi|84488883|ref|YP_447115.1|	-	5.3e-37	127.0	0.1	9.6e-37	126.1	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488883|ref|YP_447115.1|	-	3e-25	89.2	0.0	5.3e-25	88.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488883|ref|YP_447115.1|	-	1.3e-20	74.1	0.0	2.1e-20	73.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|84488883|ref|YP_447115.1|	-	9.4e-09	35.9	0.0	1.2e-08	35.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|84488883|ref|YP_447115.1|	-	0.071	13.5	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.26	gi|84488884|ref|YP_447116.1|	-	1.3e-23	83.7	0.0	1.9e-23	83.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84488884|ref|YP_447116.1|	-	1.4e-07	31.7	0.0	1.7e-07	31.4	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Response_reg	PF00072.24	gi|84488884|ref|YP_447116.1|	-	0.0055	16.9	0.0	0.013	15.6	0.0	1.6	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Glyco_tranf_2_2	PF10111.9	gi|84488884|ref|YP_447116.1|	-	0.0065	16.0	0.0	0.0091	15.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
YflT	PF11181.8	gi|84488884|ref|YP_447116.1|	-	0.097	13.2	0.1	0.21	12.1	0.1	1.5	1	0	0	1	1	1	0	Heat	induced	stress	protein	YflT
Glyco_tranf_2_4	PF13704.6	gi|84488884|ref|YP_447116.1|	-	0.1	13.2	0.0	0.19	12.3	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
Glyco_trans_1_4	PF13692.6	gi|84488885|ref|YP_447117.1|	-	3.8e-27	95.3	0.0	5.5e-27	94.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84488885|ref|YP_447117.1|	-	1.9e-10	40.6	0.1	6.4e-10	38.8	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488885|ref|YP_447117.1|	-	3.1e-09	37.1	0.0	6.3e-09	36.1	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|84488885|ref|YP_447117.1|	-	8.3e-07	29.3	0.0	3.3e-06	27.4	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84488886|ref|YP_447118.1|	-	5e-30	104.3	2.6	6.1e-30	104.0	0.5	2.0	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488886|ref|YP_447118.1|	-	3.2e-24	85.9	0.0	5.3e-24	85.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488886|ref|YP_447118.1|	-	1.3e-21	77.3	0.0	3.1e-21	76.1	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|84488886|ref|YP_447118.1|	-	2.9e-09	37.6	0.0	8.4e-09	36.1	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|84488886|ref|YP_447118.1|	-	2.7e-06	27.7	0.0	6.7e-06	26.4	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|84488886|ref|YP_447118.1|	-	8.6e-06	25.8	1.3	2e-05	24.6	0.5	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_transf_5	PF08323.11	gi|84488886|ref|YP_447118.1|	-	0.0068	16.1	0.6	0.61	9.7	0.0	2.5	1	1	1	2	2	2	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.20	gi|84488887|ref|YP_447119.1|	-	4.4e-19	68.7	0.1	8.4e-19	67.7	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488887|ref|YP_447119.1|	-	1.5e-16	61.1	0.0	2.8e-16	60.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488887|ref|YP_447119.1|	-	9.2e-11	42.0	0.1	1.4e-10	41.4	0.1	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|84488887|ref|YP_447119.1|	-	5.6e-08	33.4	0.0	7.8e-08	32.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.6	gi|84488887|ref|YP_447119.1|	-	6.3e-06	26.3	4.5	4.2e-05	23.6	4.4	2.5	2	1	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|84488887|ref|YP_447119.1|	-	0.0015	18.9	0.0	0.0028	18.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MGDG_synth	PF06925.11	gi|84488887|ref|YP_447119.1|	-	0.064	13.4	0.4	0.13	12.4	0.4	1.5	1	0	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
Epimerase	PF01370.21	gi|84488888|ref|YP_447120.1|	-	1.3e-50	172.2	0.0	1.5e-50	171.9	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|84488888|ref|YP_447120.1|	-	2.3e-47	162.0	0.0	4.1e-47	161.2	0.0	1.4	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|84488888|ref|YP_447120.1|	-	1.1e-16	60.7	0.0	1.5e-16	60.2	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|84488888|ref|YP_447120.1|	-	4.6e-15	55.5	0.0	3.4e-13	49.4	0.0	2.1	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.17	gi|84488888|ref|YP_447120.1|	-	1.6e-10	40.6	0.0	2.2e-10	40.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|84488888|ref|YP_447120.1|	-	1.1e-06	28.0	0.0	5.9e-05	22.4	0.0	2.3	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|84488888|ref|YP_447120.1|	-	0.00087	19.2	0.0	0.0012	18.7	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|84488888|ref|YP_447120.1|	-	0.0066	15.9	0.0	0.031	13.8	0.0	1.9	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.10	gi|84488888|ref|YP_447120.1|	-	0.015	15.2	0.0	0.08	12.9	0.0	2.1	1	1	0	1	1	1	0	KR	domain
NmrA	PF05368.13	gi|84488888|ref|YP_447120.1|	-	0.021	14.4	0.0	0.046	13.3	0.0	1.5	1	1	0	1	1	1	0	NmrA-like	family
TrkA_N	PF02254.18	gi|84488888|ref|YP_447120.1|	-	0.031	14.6	0.0	0.051	13.8	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|84488888|ref|YP_447120.1|	-	0.096	13.0	0.0	0.25	11.6	0.0	1.7	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
TehB	PF03848.14	gi|84488889|ref|YP_447121.1|	-	4.3e-14	52.4	0.3	5.1e-14	52.1	0.3	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_25	PF13649.6	gi|84488889|ref|YP_447121.1|	-	2.2e-12	47.5	0.0	3.3e-12	47.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|84488889|ref|YP_447121.1|	-	2.6e-12	46.9	0.0	3.1e-12	46.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|84488889|ref|YP_447121.1|	-	4e-10	40.2	0.0	6.2e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|84488889|ref|YP_447121.1|	-	6.9e-08	32.4	0.0	8.6e-08	32.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|84488889|ref|YP_447121.1|	-	3.5e-07	30.9	0.1	5.3e-07	30.3	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
TPMT	PF05724.11	gi|84488889|ref|YP_447121.1|	-	0.0034	17.1	0.0	0.031	13.9	0.0	2.0	1	1	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
CMAS	PF02353.20	gi|84488889|ref|YP_447121.1|	-	0.0049	16.2	0.1	0.037	13.3	0.0	1.9	1	1	1	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.10	gi|84488889|ref|YP_447121.1|	-	0.05	13.2	0.0	0.072	12.7	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
NodS	PF05401.11	gi|84488889|ref|YP_447121.1|	-	0.13	11.9	0.0	0.22	11.1	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
LicD	PF04991.13	gi|84488890|ref|YP_447122.1|	-	1.4e-46	159.5	10.4	3.1e-46	158.3	10.4	1.5	1	1	0	1	1	1	1	LicD	family
HTH_5	PF01022.20	gi|84488891|ref|YP_447123.1|	-	1.6e-07	31.1	0.3	4.4e-07	29.7	0.3	1.8	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
V4R	PF02830.18	gi|84488891|ref|YP_447123.1|	-	3.6e-06	26.9	0.9	6.6e-06	26.0	0.9	1.3	1	0	0	1	1	1	1	V4R	domain
HTH_24	PF13412.6	gi|84488891|ref|YP_447123.1|	-	6.8e-06	25.6	1.3	1.8e-05	24.2	1.3	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|84488891|ref|YP_447123.1|	-	2.9e-05	23.9	0.1	5.8e-05	22.9	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|84488891|ref|YP_447123.1|	-	0.0041	17.2	0.0	0.0083	16.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|84488891|ref|YP_447123.1|	-	0.0051	16.7	0.0	0.0079	16.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|84488891|ref|YP_447123.1|	-	0.0084	15.9	0.0	0.016	15.0	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.6	gi|84488891|ref|YP_447123.1|	-	0.011	15.7	0.1	0.026	14.5	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
RP-C	PF03428.13	gi|84488891|ref|YP_447123.1|	-	0.021	14.5	0.0	0.033	13.8	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
MetOD1	PF18546.1	gi|84488891|ref|YP_447123.1|	-	0.028	14.4	0.5	0.051	13.5	0.5	1.6	1	0	0	1	1	1	0	Metanogen	output	domain	1
HTH_29	PF13551.6	gi|84488891|ref|YP_447123.1|	-	0.14	12.2	0.0	0.24	11.4	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
Glyco_tranf_2_5	PF13712.6	gi|84488892|ref|YP_447124.1|	-	7.3e-17	61.7	0.9	7.8e-16	58.4	0.9	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family
Glycos_transf_2	PF00535.26	gi|84488892|ref|YP_447124.1|	-	2.1e-09	37.4	0.1	3.4e-05	23.7	0.0	2.4	1	1	1	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84488892|ref|YP_447124.1|	-	0.00014	21.4	0.1	0.00029	20.4	0.1	1.5	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Polysacc_synt	PF01943.17	gi|84488893|ref|YP_447125.1|	-	3.4e-42	144.7	40.0	3.4e-42	144.7	40.0	2.3	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.6	gi|84488893|ref|YP_447125.1|	-	1.8e-20	73.4	25.7	1.8e-20	73.4	25.7	1.7	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|84488893|ref|YP_447125.1|	-	1.7e-19	70.3	17.5	1.7e-19	70.3	17.5	3.9	2	1	1	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|84488893|ref|YP_447125.1|	-	4.8e-09	35.3	45.6	4.8e-09	35.3	45.6	1.9	1	1	0	1	1	1	1	Lipid	II	flippase	MurJ
Hexapep	PF00132.24	gi|84488894|ref|YP_447126.1|	-	4.7e-11	41.9	9.1	6.9e-08	31.9	1.1	3.3	3	0	0	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|84488894|ref|YP_447126.1|	-	0.00024	20.8	9.1	0.0017	18.0	0.4	2.5	2	0	0	2	2	2	2	Hexapeptide	repeat	of	succinyl-transferase
GLF	PF03275.13	gi|84488895|ref|YP_447127.1|	-	2.7e-64	216.7	16.4	4.2e-64	216.0	16.4	1.3	1	0	0	1	1	1	1	UDP-galactopyranose	mutase
NAD_binding_8	PF13450.6	gi|84488895|ref|YP_447127.1|	-	5.3e-17	61.8	0.0	1.1e-16	60.8	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.7	gi|84488895|ref|YP_447127.1|	-	1e-06	28.4	0.1	0.00019	20.9	0.0	2.7	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.24	gi|84488895|ref|YP_447127.1|	-	5.4e-06	26.0	0.0	1.9e-05	24.2	0.0	1.9	3	0	0	3	3	3	1	Flavin	containing	amine	oxidoreductase
Pyr_redox_2	PF07992.14	gi|84488895|ref|YP_447127.1|	-	2.8e-05	23.5	0.0	8.3e-05	22.0	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|84488895|ref|YP_447127.1|	-	5.5e-05	22.9	0.1	8.5e-05	22.3	0.1	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|84488895|ref|YP_447127.1|	-	0.00014	21.2	0.0	0.00026	20.3	0.0	1.4	1	0	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.14	gi|84488895|ref|YP_447127.1|	-	0.00043	19.1	0.1	0.0014	17.4	0.0	1.9	3	0	0	3	3	3	1	HI0933-like	protein
Pyr_redox	PF00070.27	gi|84488895|ref|YP_447127.1|	-	0.00045	20.7	0.2	0.0074	16.8	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|84488895|ref|YP_447127.1|	-	0.0018	17.6	2.3	0.0029	16.9	0.1	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|84488895|ref|YP_447127.1|	-	0.0022	18.0	0.0	0.0035	17.3	0.0	1.4	1	0	0	1	1	1	1	FAD-NAD(P)-binding
TrkA_N	PF02254.18	gi|84488895|ref|YP_447127.1|	-	0.0024	18.1	0.1	0.0061	16.8	0.1	1.7	1	0	0	1	1	1	1	TrkA-N	domain
FAD_binding_2	PF00890.24	gi|84488895|ref|YP_447127.1|	-	0.012	14.7	0.0	0.018	14.1	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
GMC_oxred_N	PF00732.19	gi|84488895|ref|YP_447127.1|	-	0.056	12.8	0.0	0.15	11.4	0.0	1.6	2	0	0	2	2	2	0	GMC	oxidoreductase
GIDA	PF01134.22	gi|84488895|ref|YP_447127.1|	-	0.07	12.2	0.3	0.25	10.4	0.0	1.9	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.12	gi|84488895|ref|YP_447127.1|	-	0.17	10.9	0.0	0.28	10.2	0.0	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Polysacc_synt	PF01943.17	gi|84488896|ref|YP_447128.1|	-	5.5e-58	196.5	29.9	5.5e-58	196.5	29.9	2.0	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.6	gi|84488896|ref|YP_447128.1|	-	1.3e-17	64.0	19.5	1.3e-17	64.0	19.5	2.1	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|84488896|ref|YP_447128.1|	-	8e-05	22.7	11.2	8e-05	22.7	11.2	4.1	1	1	3	4	4	4	1	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|84488896|ref|YP_447128.1|	-	0.001	17.7	34.3	0.0084	14.7	34.3	2.4	1	1	0	1	1	1	1	Lipid	II	flippase	MurJ
GDP_Man_Dehyd	PF16363.5	gi|84488897|ref|YP_447129.1|	-	2.7e-55	188.1	0.3	2.6e-54	184.9	0.3	1.9	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|84488897|ref|YP_447129.1|	-	1.3e-53	182.0	0.0	1.5e-53	181.7	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|84488897|ref|YP_447129.1|	-	1.1e-25	90.2	0.0	1.5e-25	89.8	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|84488897|ref|YP_447129.1|	-	7.7e-18	64.6	0.0	7.2e-17	61.5	0.0	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|84488897|ref|YP_447129.1|	-	4.5e-10	39.1	0.6	3.2e-08	33.1	0.6	2.6	1	1	0	1	1	1	1	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|84488897|ref|YP_447129.1|	-	1.1e-07	31.2	0.0	2.5e-07	30.1	0.0	1.6	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.6	gi|84488897|ref|YP_447129.1|	-	3.3e-07	30.4	0.0	5.2e-07	29.7	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
NmrA	PF05368.13	gi|84488897|ref|YP_447129.1|	-	0.02	14.4	0.0	0.04	13.5	0.0	1.6	2	0	0	2	2	2	0	NmrA-like	family
adh_short	PF00106.25	gi|84488897|ref|YP_447129.1|	-	0.029	13.8	0.3	0.099	12.1	0.3	1.9	1	1	0	1	1	1	0	short	chain	dehydrogenase
TrkA_N	PF02254.18	gi|84488897|ref|YP_447129.1|	-	0.035	14.4	0.2	0.16	12.2	0.1	2.0	2	0	0	2	2	2	0	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|84488897|ref|YP_447129.1|	-	0.056	13.7	0.0	0.11	12.8	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
F-112	PF09645.10	gi|84488897|ref|YP_447129.1|	-	0.061	13.4	0.2	0.16	12.0	0.0	1.8	2	0	0	2	2	2	0	F-112	protein
ThiF	PF00899.21	gi|84488897|ref|YP_447129.1|	-	0.14	11.5	0.1	0.76	9.1	0.0	2.1	2	0	0	2	2	2	0	ThiF	family
KR	PF08659.10	gi|84488897|ref|YP_447129.1|	-	0.2	11.6	0.1	0.83	9.5	0.0	1.9	2	0	0	2	2	2	0	KR	domain
DUF1616	PF07760.11	gi|84488898|ref|YP_447130.1|	-	8.1e-24	84.5	1.7	9.2e-24	84.3	1.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
DUF1735	PF08522.10	gi|84488898|ref|YP_447130.1|	-	0.024	15.2	4.8	0.03	14.9	4.8	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1735)
HAD_2	PF13419.6	gi|84488899|ref|YP_447131.1|	-	0.00067	19.8	4.9	0.32	11.1	0.1	3.5	2	1	2	4	4	4	2	Haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.16	gi|84488899|ref|YP_447131.1|	-	0.012	14.8	0.0	0.021	13.9	0.0	1.4	1	0	0	1	1	1	0	Trehalose-phosphatase
DUF4377	PF14302.6	gi|84488899|ref|YP_447131.1|	-	0.11	12.6	0.5	0.27	11.3	0.5	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4377)
DUF2683	PF10884.8	gi|84488899|ref|YP_447131.1|	-	0.73	10.1	5.4	0.31	11.3	2.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2683)
FTR_C	PF02741.15	gi|84488900|ref|YP_447132.1|	-	1.1e-54	184.6	0.0	1.6e-54	184.0	0.0	1.2	1	0	0	1	1	1	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|84488900|ref|YP_447132.1|	-	2.7e-44	150.6	0.1	3.7e-44	150.1	0.1	1.2	1	0	0	1	1	1	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
PfkB	PF00294.24	gi|84488901|ref|YP_447133.1|	-	1.6e-51	175.4	0.1	2e-51	175.1	0.1	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Flg_bbr_C	PF06429.13	gi|84488901|ref|YP_447133.1|	-	0.042	14.0	0.0	0.11	12.7	0.0	1.7	1	0	0	1	1	1	0	Flagellar	basal	body	rod	FlgEFG	protein	C-terminal
DUF2953	PF11167.8	gi|84488901|ref|YP_447133.1|	-	0.22	11.6	0.9	3.3	7.9	0.9	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2953)
SOR_SNZ	PF01680.17	gi|84488902|ref|YP_447134.1|	-	6.7e-105	349.4	9.8	8.8e-105	349.0	9.8	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.14	gi|84488902|ref|YP_447134.1|	-	1e-08	34.9	6.1	9.1e-07	28.4	0.5	2.3	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|84488902|ref|YP_447134.1|	-	0.0001	21.5	0.1	0.046	12.8	0.0	2.3	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|84488902|ref|YP_447134.1|	-	0.002	17.6	2.5	0.011	15.1	0.1	2.2	2	0	0	2	2	2	1	Nitronate	monooxygenase
NanE	PF04131.14	gi|84488902|ref|YP_447134.1|	-	0.0028	16.9	1.5	0.065	12.4	0.1	2.7	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.21	gi|84488902|ref|YP_447134.1|	-	0.0031	17.0	0.2	0.014	14.8	0.0	2.2	2	1	0	2	2	2	1	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|84488902|ref|YP_447134.1|	-	0.0057	15.9	0.1	0.055	12.6	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
Chaperone_III	PF07824.12	gi|84488902|ref|YP_447134.1|	-	0.042	14.1	0.1	0.57	10.4	0.0	2.3	2	0	0	2	2	2	0	Type	III	secretion	chaperone	domain
TetR_C_27	PF17935.1	gi|84488902|ref|YP_447134.1|	-	0.06	13.4	0.0	0.15	12.2	0.0	1.6	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
Milton	PF12448.8	gi|84488902|ref|YP_447134.1|	-	0.22	11.6	0.0	0.43	10.7	0.0	1.6	1	1	0	1	1	1	0	Kinesin	associated	protein
ExoD	PF06055.12	gi|84488903|ref|YP_447135.1|	-	3.5e-44	150.3	5.5	4.1e-44	150.1	5.5	1.0	1	0	0	1	1	1	1	Exopolysaccharide	synthesis,	ExoD
Smim3	PF17307.2	gi|84488903|ref|YP_447135.1|	-	0.017	14.6	0.7	0.073	12.6	0.7	2.1	1	0	0	1	1	1	0	Small	integral	membrane	protein	3
NUDIX	PF00293.28	gi|84488904|ref|YP_447136.1|	-	2.6e-05	24.3	0.0	6.4e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	NUDIX	domain
HN	PF00423.19	gi|84488905|ref|YP_447137.1|	-	0.029	13.2	8.9	0.036	12.9	8.9	1.1	1	0	0	1	1	1	0	Haemagglutinin-neuraminidase
MHB	PF16525.5	gi|84488905|ref|YP_447137.1|	-	0.08	13.2	0.4	0.08	13.2	0.4	2.0	2	1	0	2	2	2	0	Haemophore,	haem-binding
FliP	PF00813.20	gi|84488905|ref|YP_447137.1|	-	0.49	10.3	5.8	0.39	10.6	1.3	2.1	1	1	1	2	2	2	0	FliP	family
Methyltransf_30	PF05430.11	gi|84488906|ref|YP_447138.1|	-	1.4e-26	92.8	0.0	2.3e-26	92.1	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
DUF5397	PF17375.2	gi|84488906|ref|YP_447138.1|	-	0.0085	15.8	0.1	0.016	14.9	0.1	1.4	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5397)
Spermine_synth	PF01564.17	gi|84488906|ref|YP_447138.1|	-	0.0087	15.5	0.1	0.022	14.2	0.0	1.7	2	0	0	2	2	2	1	Spermine/spermidine	synthase	domain
Methyltransf_25	PF13649.6	gi|84488906|ref|YP_447138.1|	-	0.03	15.0	0.2	1.2	9.9	0.0	2.4	1	1	1	2	2	2	0	Methyltransferase	domain
Bmt2	PF11968.8	gi|84488907|ref|YP_447139.1|	-	0.042	13.7	0.8	0.066	13.1	0.8	1.4	1	1	0	1	1	1	0	25S	rRNA	(adenine(2142)-N(1))-methyltransferase,	Bmt2
Ric8	PF10165.9	gi|84488907|ref|YP_447139.1|	-	0.055	12.5	1.1	0.055	12.5	1.1	1.2	1	0	0	1	1	1	0	Guanine	nucleotide	exchange	factor	synembryn
Class_IIIsignal	PF04021.12	gi|84488908|ref|YP_447140.1|	-	0.079	13.0	6.2	2.2	8.3	6.2	2.3	1	1	0	1	1	1	0	Class	III	signal	peptide
TadF	PF16964.5	gi|84488908|ref|YP_447140.1|	-	1.7	8.4	8.1	0.47	10.2	2.6	2.0	1	1	1	2	2	2	0	Putative	tight	adherence	pilin	protein	F
Class_IIIsignal	PF04021.12	gi|84488909|ref|YP_447141.1|	-	6.7e-07	29.1	0.6	1.2e-06	28.3	0.6	1.4	1	0	0	1	1	1	1	Class	III	signal	peptide
DUF810	PF05664.11	gi|84488909|ref|YP_447141.1|	-	0.0062	15.1	0.1	0.0069	15.0	0.1	1.1	1	0	0	1	1	1	1	Plant	family	of	unknown	function	(DUF810)
Glycos_transf_4	PF00953.21	gi|84488910|ref|YP_447142.1|	-	1.8e-26	93.0	23.3	1.8e-26	93.0	23.3	2.6	3	1	0	3	3	3	1	Glycosyl	transferase	family	4
DUF3043	PF11241.8	gi|84488910|ref|YP_447142.1|	-	3.7	7.5	4.8	13	5.7	1.9	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3043)
HTH_7	PF02796.15	gi|84488911|ref|YP_447143.1|	-	2.4e-11	43.5	3.5	1e-05	25.5	0.1	2.7	3	0	0	3	3	2	2	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|84488911|ref|YP_447143.1|	-	5.1e-10	38.9	0.0	0.0011	18.7	0.0	2.5	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_28	PF13518.6	gi|84488911|ref|YP_447143.1|	-	2.8e-07	30.6	0.0	0.0043	17.1	0.0	3.0	2	1	1	3	3	3	2	Helix-turn-helix	domain
Terminase_5	PF06056.12	gi|84488911|ref|YP_447143.1|	-	4.2e-07	29.8	0.0	0.0027	17.6	0.0	2.3	2	0	0	2	2	2	2	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.6	gi|84488911|ref|YP_447143.1|	-	8.5e-07	28.6	0.0	0.0025	17.5	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_32	PF13565.6	gi|84488911|ref|YP_447143.1|	-	8.9e-07	29.4	0.0	0.0018	18.9	0.0	2.5	1	1	2	3	3	3	2	Homeodomain-like	domain
CENP-B_N	PF04218.13	gi|84488911|ref|YP_447143.1|	-	6.4e-06	25.7	0.8	0.07	12.8	0.1	2.5	2	0	0	2	2	2	2	CENP-B	N-terminal	DNA-binding	domain
GerE	PF00196.19	gi|84488911|ref|YP_447143.1|	-	1.2e-05	24.7	0.1	0.0036	16.8	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.12	gi|84488911|ref|YP_447143.1|	-	4.3e-05	23.1	0.0	0.2	11.4	0.0	2.5	2	0	0	2	2	2	2	Sigma-70,	region	4
HTH_30	PF13556.6	gi|84488911|ref|YP_447143.1|	-	5.1e-05	23.0	0.0	0.00026	20.7	0.0	2.0	2	0	0	2	2	2	1	PucR	C-terminal	helix-turn-helix	domain
HTH_24	PF13412.6	gi|84488911|ref|YP_447143.1|	-	5.6e-05	22.6	0.1	1.1	8.9	0.0	3.5	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_29	PF13551.6	gi|84488911|ref|YP_447143.1|	-	6.8e-05	22.8	0.0	1.4	9.0	0.0	3.2	3	0	0	3	3	3	1	Winged	helix-turn	helix
PAX	PF00292.18	gi|84488911|ref|YP_447143.1|	-	7e-05	22.8	0.0	0.25	11.3	0.0	2.4	2	1	1	3	3	2	2	'Paired	box'	domain
HTH_Tnp_1	PF01527.20	gi|84488911|ref|YP_447143.1|	-	7.6e-05	23.0	0.0	0.048	14.0	0.0	2.2	1	1	1	2	2	2	1	Transposase
TnsD	PF15978.5	gi|84488911|ref|YP_447143.1|	-	0.00033	19.7	0.7	0.043	12.8	0.2	2.2	1	1	1	2	2	2	2	Tn7-like	transposition	protein	D
DUF1699	PF08004.11	gi|84488911|ref|YP_447143.1|	-	0.0014	18.3	0.1	0.0058	16.3	0.0	2.0	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1699)
HTH_11	PF08279.12	gi|84488911|ref|YP_447143.1|	-	0.0015	18.4	0.2	1.9	8.5	0.0	3.8	3	1	0	4	4	4	1	HTH	domain
HTH_17	PF12728.7	gi|84488911|ref|YP_447143.1|	-	0.0031	17.6	0.2	0.29	11.4	0.0	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.16	gi|84488911|ref|YP_447143.1|	-	0.005	16.9	0.5	0.33	11.0	0.0	2.2	1	1	1	2	2	2	1	Transposase
HTH_8	PF02954.19	gi|84488911|ref|YP_447143.1|	-	0.0058	16.4	0.1	4.3	7.2	0.0	2.9	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	Fis	family
Rsbr_N	PF08678.10	gi|84488911|ref|YP_447143.1|	-	0.0064	16.6	0.1	0.84	9.7	0.0	2.2	1	1	1	2	2	2	1	Rsbr	N	terminal
TrmB	PF01978.19	gi|84488911|ref|YP_447143.1|	-	0.011	15.6	0.1	3	7.8	0.0	2.8	3	0	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_22	PF13309.6	gi|84488911|ref|YP_447143.1|	-	0.011	15.8	0.6	0.47	10.6	0.0	3.0	2	1	0	2	2	2	0	HTH	domain
MerR	PF00376.23	gi|84488911|ref|YP_447143.1|	-	0.012	15.4	0.0	7.6	6.4	0.0	2.6	2	0	0	2	2	2	0	MerR	family	regulatory	protein
Phage_term_sma	PF07141.11	gi|84488911|ref|YP_447143.1|	-	0.02	14.7	0.1	0.027	14.2	0.1	1.2	1	0	0	1	1	1	0	Putative	bacteriophage	terminase	small	subunit
HTH_Tnp_ISL3	PF13542.6	gi|84488911|ref|YP_447143.1|	-	0.043	13.2	0.0	9.7	5.7	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Tnp_IS1	PF12759.7	gi|84488911|ref|YP_447143.1|	-	0.044	13.4	0.0	1.2	8.8	0.0	2.2	2	0	0	2	2	2	0	InsA	C-terminal	domain
HEPN_Toprim_N	PF18871.1	gi|84488911|ref|YP_447143.1|	-	0.059	13.3	0.0	0.069	13.1	0.0	1.1	1	0	0	1	1	1	0	HEPN/Toprim	N-terminal	domain	1
HTH_43	PF09904.9	gi|84488911|ref|YP_447143.1|	-	0.073	13.0	0.0	0.28	11.2	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_20	PF12840.7	gi|84488911|ref|YP_447143.1|	-	0.18	11.9	0.0	3.4	7.8	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF530	PF04409.12	gi|84488912|ref|YP_447144.1|	-	6.8e-224	744.1	36.7	7.6e-224	743.9	36.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF530)
DUF3725	PF12523.8	gi|84488912|ref|YP_447144.1|	-	0.53	10.6	5.1	1.5	9.1	0.1	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3725)
tRNA-synt_1g	PF09334.11	gi|84488913|ref|YP_447145.1|	-	6.4e-161	535.5	1.2	8.3e-161	535.1	1.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|84488913|ref|YP_447145.1|	-	2.5e-23	82.0	0.9	6.7e-23	80.6	0.6	1.8	2	0	0	2	2	2	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|84488913|ref|YP_447145.1|	-	2.1e-20	72.6	5.0	1.3e-07	30.3	0.0	3.8	2	2	0	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.19	gi|84488913|ref|YP_447145.1|	-	1.9e-13	50.5	0.7	2.4e-05	23.8	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|84488913|ref|YP_447145.1|	-	7.4e-05	21.8	0.1	0.0003	19.8	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
Anticodon_1	PF08264.13	gi|84488913|ref|YP_447145.1|	-	0.00037	20.5	0.2	0.00095	19.2	0.2	1.8	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DALR_1	PF05746.15	gi|84488913|ref|YP_447145.1|	-	0.12	12.5	0.0	0.36	11.0	0.0	1.8	1	0	0	1	1	1	0	DALR	anticodon	binding	domain
DZR	PF12773.7	gi|84488913|ref|YP_447145.1|	-	0.17	11.9	8.9	2.8	8.0	8.9	2.2	1	1	1	2	2	2	0	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|84488913|ref|YP_447145.1|	-	0.26	11.3	7.0	0.59	10.1	7.0	1.6	1	0	0	1	1	1	0	zinc-ribbons
zf-C3HC4_3	PF13920.6	gi|84488913|ref|YP_447145.1|	-	0.37	10.7	6.5	1.1	9.2	0.5	2.4	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.19	gi|84488913|ref|YP_447145.1|	-	0.42	10.6	5.6	1.3	9.1	0.7	2.5	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_primase_lrg	PF04104.14	gi|84488914|ref|YP_447146.1|	-	1.4e-16	60.7	0.5	1.4e-16	60.7	0.5	1.9	2	0	0	2	2	2	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
SOAR	PF16533.5	gi|84488914|ref|YP_447146.1|	-	0.21	11.6	0.1	0.21	11.6	0.1	2.4	3	0	0	3	3	3	0	STIM1	Orai1-activating	region
DNA_primase_S	PF01896.19	gi|84488915|ref|YP_447147.1|	-	6.8e-15	55.5	0.1	1.2e-14	54.7	0.1	1.4	1	0	0	1	1	1	1	DNA	primase	small	subunit
zf-AD	PF07776.15	gi|84488915|ref|YP_447147.1|	-	0.038	14.2	0.1	0.084	13.1	0.1	1.5	1	0	0	1	1	1	0	Zinc-finger	associated	domain	(zf-AD)
tRNA_NucTransf2	PF09249.11	gi|84488916|ref|YP_447148.1|	-	2.1e-43	147.1	0.2	4.2e-43	146.2	0.2	1.5	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|84488916|ref|YP_447148.1|	-	1.4e-10	41.3	0.0	4.2e-10	39.8	0.0	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
SMODS	PF18144.1	gi|84488916|ref|YP_447148.1|	-	0.0017	18.5	0.3	0.0055	16.9	0.0	2.0	2	0	0	2	2	2	1	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
Methyltransf_31	PF13847.6	gi|84488917|ref|YP_447149.1|	-	5.3e-12	45.8	0.1	9.4e-12	45.0	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|84488917|ref|YP_447149.1|	-	5.1e-11	42.7	0.3	6.9e-11	42.3	0.3	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|84488917|ref|YP_447149.1|	-	8.1e-10	38.5	0.1	1.5e-09	37.7	0.0	1.4	1	1	1	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|84488917|ref|YP_447149.1|	-	1.4e-09	38.5	0.0	2.5e-09	37.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|84488917|ref|YP_447149.1|	-	2.4e-08	33.7	0.0	4e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Met_10	PF02475.16	gi|84488917|ref|YP_447149.1|	-	3.2e-08	33.5	0.0	3.5e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
RrnaAD	PF00398.20	gi|84488917|ref|YP_447149.1|	-	2.7e-07	29.9	0.1	4.1e-07	29.3	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Cons_hypoth95	PF03602.15	gi|84488917|ref|YP_447149.1|	-	4.2e-07	29.8	0.0	6.1e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PrmA	PF06325.13	gi|84488917|ref|YP_447149.1|	-	6.6e-07	29.0	0.0	1.2e-06	28.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.12	gi|84488917|ref|YP_447149.1|	-	2.3e-06	28.2	0.0	6.9e-06	26.6	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
TrmK	PF04816.12	gi|84488917|ref|YP_447149.1|	-	6.7e-06	25.8	0.2	9.2e-06	25.3	0.2	1.2	1	0	0	1	1	1	1	tRNA	(adenine(22)-N(1))-methyltransferase
PCMT	PF01135.19	gi|84488917|ref|YP_447149.1|	-	8.8e-06	25.6	0.1	1.1e-05	25.3	0.1	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.20	gi|84488917|ref|YP_447149.1|	-	2.1e-05	24.0	0.1	3e-05	23.5	0.1	1.3	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_12	PF08242.12	gi|84488917|ref|YP_447149.1|	-	2.4e-05	25.0	0.1	3.7e-05	24.4	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|84488917|ref|YP_447149.1|	-	3.3e-05	23.8	0.0	5e-05	23.2	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.6	gi|84488917|ref|YP_447149.1|	-	3.7e-05	23.8	0.0	4.9e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|84488917|ref|YP_447149.1|	-	7.7e-05	22.1	0.1	8.8e-05	21.9	0.1	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_3	PF01596.17	gi|84488917|ref|YP_447149.1|	-	0.00013	21.3	0.1	0.00024	20.3	0.1	1.4	1	0	0	1	1	1	1	O-methyltransferase
MethyltransfD12	PF02086.15	gi|84488917|ref|YP_447149.1|	-	0.00022	21.0	0.0	0.00028	20.6	0.0	1.1	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
UPF0020	PF01170.18	gi|84488917|ref|YP_447149.1|	-	0.00034	20.3	0.0	0.01	15.6	0.0	2.1	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DOT1	PF08123.13	gi|84488917|ref|YP_447149.1|	-	0.00096	18.7	0.0	0.0015	18.1	0.0	1.3	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
NodS	PF05401.11	gi|84488917|ref|YP_447149.1|	-	0.0012	18.5	0.0	0.0017	18.0	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_4	PF02390.17	gi|84488917|ref|YP_447149.1|	-	0.0015	18.1	0.0	0.0042	16.6	0.0	1.7	2	0	0	2	2	2	1	Putative	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|84488917|ref|YP_447149.1|	-	0.0086	15.7	0.0	0.012	15.3	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
TehB	PF03848.14	gi|84488917|ref|YP_447149.1|	-	0.012	15.0	0.0	0.016	14.7	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
rRNA_methylase	PF06962.12	gi|84488917|ref|YP_447149.1|	-	0.018	15.0	0.0	0.023	14.7	0.0	1.3	1	0	0	1	1	1	0	Putative	rRNA	methylase
Methyltransf_5	PF01795.19	gi|84488917|ref|YP_447149.1|	-	0.022	14.3	0.0	0.031	13.8	0.0	1.5	1	1	0	1	1	1	0	MraW	methylase	family
tRNA_U5-meth_tr	PF05958.11	gi|84488917|ref|YP_447149.1|	-	0.032	13.2	0.0	0.042	12.8	0.0	1.1	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_8	PF05148.15	gi|84488917|ref|YP_447149.1|	-	0.033	14.0	0.0	0.06	13.2	0.0	1.4	2	0	0	2	2	1	0	Hypothetical	methyltransferase
Methyltransf_2	PF00891.18	gi|84488917|ref|YP_447149.1|	-	0.051	12.9	1.4	1.3	8.3	1.4	2.5	1	1	0	1	1	1	0	O-methyltransferase	domain
FtsJ	PF01728.19	gi|84488917|ref|YP_447149.1|	-	0.052	13.7	0.0	0.098	12.8	0.0	1.3	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
PRMT5	PF05185.16	gi|84488917|ref|YP_447149.1|	-	0.061	13.2	0.0	0.084	12.7	0.0	1.2	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
Methyltransf_24	PF13578.6	gi|84488917|ref|YP_447149.1|	-	0.09	13.8	0.0	0.13	13.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
N6_Mtase	PF02384.16	gi|84488917|ref|YP_447149.1|	-	0.1	11.9	0.0	0.13	11.5	0.0	1.1	1	0	0	1	1	1	0	N-6	DNA	Methylase
Flavoprotein	PF02441.19	gi|84488918|ref|YP_447150.1|	-	1.3e-25	90.0	0.1	1.9e-25	89.5	0.1	1.2	1	0	0	1	1	1	1	Flavoprotein
LigT_PEase	PF02834.16	gi|84488919|ref|YP_447151.1|	-	8.7e-29	99.6	0.0	1.2e-13	51.1	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.6	gi|84488919|ref|YP_447151.1|	-	2.4e-13	50.2	0.0	2.9e-13	50.0	0.0	1.0	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
CPDase	PF07823.11	gi|84488919|ref|YP_447151.1|	-	0.14	11.8	0.5	4.5	6.9	0.0	2.1	2	0	0	2	2	2	0	Cyclic	phosphodiesterase-like	protein
DHQS	PF01959.16	gi|84488920|ref|YP_447152.1|	-	1.7e-144	481.1	3.9	1.9e-144	480.9	3.9	1.0	1	0	0	1	1	1	1	3-dehydroquinate	synthase	II
Hint	PF01079.20	gi|84488920|ref|YP_447152.1|	-	0.0011	18.6	0.0	0.48	9.9	0.0	2.5	2	0	0	2	2	2	2	Hint	module
DeoC	PF01791.9	gi|84488921|ref|YP_447153.1|	-	2.1e-60	204.3	0.0	2.5e-60	204.0	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
OMPdecase	PF00215.24	gi|84488921|ref|YP_447153.1|	-	8.7e-05	22.2	0.0	0.00014	21.5	0.0	1.3	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Methyltransf_24	PF13578.6	gi|84488922|ref|YP_447154.1|	-	3.3e-06	28.1	0.0	4.5e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|84488922|ref|YP_447154.1|	-	6.6e-06	26.0	0.0	7.6e-06	25.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|84488922|ref|YP_447154.1|	-	0.0001	22.9	0.0	0.00013	22.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|84488922|ref|YP_447154.1|	-	0.003	17.4	0.0	0.0041	17.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|84488922|ref|YP_447154.1|	-	0.0033	18.1	0.0	0.0044	17.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|84488922|ref|YP_447154.1|	-	0.037	13.1	0.0	0.047	12.8	0.0	1.1	1	0	0	1	1	1	0	Fibrillarin
NodS	PF05401.11	gi|84488922|ref|YP_447154.1|	-	0.067	12.8	0.0	0.084	12.5	0.0	1.1	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Rtt106	PF08512.12	gi|84488922|ref|YP_447154.1|	-	0.092	13.2	0.1	0.16	12.4	0.1	1.4	1	0	0	1	1	1	0	Histone	chaperone	Rttp106-like
HI0933_like	PF03486.14	gi|84488923|ref|YP_447155.1|	-	2.5e-102	342.7	0.9	2.8e-102	342.5	0.9	1.0	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_3	PF13738.6	gi|84488923|ref|YP_447155.1|	-	2.5e-07	30.3	10.9	8.1e-05	22.0	0.1	3.5	3	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|84488923|ref|YP_447155.1|	-	0.00034	19.9	0.0	0.001	18.4	0.0	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|84488923|ref|YP_447155.1|	-	0.051	12.8	0.8	7.4	5.7	0.0	2.5	2	0	0	2	2	2	0	Thi4	family
DAO	PF01266.24	gi|84488923|ref|YP_447155.1|	-	0.068	12.7	0.2	0.41	10.2	0.3	1.9	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|84488923|ref|YP_447155.1|	-	0.14	11.2	0.0	4	6.4	0.0	2.3	3	0	0	3	3	3	0	FAD	binding	domain
DUF357	PF04010.13	gi|84488924|ref|YP_447156.1|	-	1.6e-18	66.5	0.1	1.8e-18	66.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CDP-OH_P_transf	PF01066.21	gi|84488925|ref|YP_447157.1|	-	5.8e-15	55.8	2.6	5.8e-15	55.8	2.6	2.3	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
Sua5_yciO_yrdC	PF01300.18	gi|84488926|ref|YP_447158.1|	-	3.7e-50	169.9	0.5	4.3e-50	169.7	0.5	1.0	1	0	0	1	1	1	1	Telomere	recombination
DUF2098	PF09871.9	gi|84488927|ref|YP_447159.1|	-	6.5e-23	80.9	2.6	7.3e-23	80.7	2.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
FidL_like	PF15941.5	gi|84488927|ref|YP_447159.1|	-	0.14	12.6	0.7	0.19	12.2	0.7	1.1	1	0	0	1	1	1	0	FidL-like	putative	membrane	protein
SMC_Nse1	PF07574.13	gi|84488928|ref|YP_447160.1|	-	0.0086	16.0	3.1	0.011	15.6	3.1	1.3	1	1	0	1	1	1	1	Nse1	non-SMC	component	of	SMC5-6	complex
DUF2115	PF09888.9	gi|84488929|ref|YP_447161.1|	-	1.2e-39	136.4	3.4	1.5e-39	136.2	3.4	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DUF2624	PF11116.8	gi|84488929|ref|YP_447161.1|	-	0.033	15.1	2.5	4.6	8.2	0.2	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2624)
DEAD	PF00270.29	gi|84488930|ref|YP_447162.1|	-	5e-16	59.0	0.1	3.5e-15	56.2	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|84488930|ref|YP_447162.1|	-	1.8e-09	37.8	0.0	1.4e-08	34.9	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HHH_2	PF12826.7	gi|84488930|ref|YP_447162.1|	-	6e-08	32.7	0.0	2.8e-06	27.3	0.0	2.9	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Helicase_C	PF00271.31	gi|84488930|ref|YP_447162.1|	-	8.6e-07	29.3	0.2	1.8e-05	25.0	0.1	3.0	1	1	1	2	2	2	1	Helicase	conserved	C-terminal	domain
HHH	PF00633.23	gi|84488930|ref|YP_447162.1|	-	0.00068	19.4	0.0	0.0023	17.7	0.0	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|84488930|ref|YP_447162.1|	-	0.0017	19.0	0.0	0.0064	17.1	0.0	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_3	PF12836.7	gi|84488930|ref|YP_447162.1|	-	0.0017	18.5	0.1	0.006	16.8	0.1	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF520	PF04461.13	gi|84488930|ref|YP_447162.1|	-	0.0089	16.2	0.1	0.022	14.9	0.1	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF520)
MAF_flag10	PF01973.18	gi|84488930|ref|YP_447162.1|	-	0.0098	15.6	0.0	0.074	12.7	0.0	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF115
PhoH	PF02562.16	gi|84488930|ref|YP_447162.1|	-	0.099	12.1	0.0	0.36	10.3	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
Glycos_transf_1	PF00534.20	gi|84488931|ref|YP_447163.1|	-	6.7e-36	123.4	2.0	1.3e-35	122.5	0.5	2.1	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84488931|ref|YP_447163.1|	-	2.3e-26	92.8	0.0	5.6e-26	91.6	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84488931|ref|YP_447163.1|	-	3.4e-22	79.3	0.0	4.7e-22	78.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|84488931|ref|YP_447163.1|	-	2.3e-12	47.1	2.2	3.4e-12	46.6	1.2	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|84488931|ref|YP_447163.1|	-	1.5e-09	38.1	0.0	3.3e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|84488931|ref|YP_447163.1|	-	3.5e-07	30.8	0.0	5e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
PhdYeFM_antitox	PF02604.19	gi|84488931|ref|YP_447163.1|	-	0.037	13.8	0.0	0.12	12.2	0.0	1.9	1	0	0	1	1	1	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
Glyco_transf_5	PF08323.11	gi|84488931|ref|YP_447163.1|	-	0.06	13.0	0.1	0.25	11.0	0.0	1.9	1	1	1	2	2	2	0	Starch	synthase	catalytic	domain
CbiD	PF01888.17	gi|84488932|ref|YP_447164.1|	-	2.7e-90	302.1	4.6	3.6e-90	301.7	4.6	1.1	1	0	0	1	1	1	1	CbiD
Yqai	PF09466.10	gi|84488932|ref|YP_447164.1|	-	0.019	15.3	0.4	3.8	7.9	0.0	2.6	2	0	0	2	2	2	0	Hypothetical	protein	Yqai
HiaBD2	PF15403.6	gi|84488932|ref|YP_447164.1|	-	0.023	15.1	0.0	0.069	13.5	0.0	1.8	1	0	0	1	1	1	0	HiaBD2_N	domain	of	Trimeric	autotransporter	adhesin	(GIN)
Thioredoxin_3	PF13192.6	gi|84488933|ref|YP_447165.1|	-	4.3e-19	68.3	0.6	4.8e-19	68.2	0.6	1.0	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|84488933|ref|YP_447165.1|	-	1.6e-10	41.0	0.1	2.7e-10	40.3	0.1	1.4	1	0	0	1	1	1	1	Glutaredoxin
DSBA	PF01323.20	gi|84488933|ref|YP_447165.1|	-	2.5e-07	30.7	0.2	0.00017	21.4	0.0	2.0	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_4	PF13462.6	gi|84488933|ref|YP_447165.1|	-	3.6e-06	27.2	1.3	0.0068	16.6	0.1	2.0	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin	PF00085.20	gi|84488933|ref|YP_447165.1|	-	1.3e-05	25.1	0.0	1.7e-05	24.8	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|84488933|ref|YP_447165.1|	-	0.0047	17.4	1.5	0.29	11.6	1.5	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF1223	PF06764.11	gi|84488933|ref|YP_447165.1|	-	0.017	15.2	0.6	0.31	11.0	0.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1223)
GHMP_kinases_N	PF00288.26	gi|84488934|ref|YP_447166.1|	-	2.9e-12	46.7	1.0	9.4e-12	45.0	0.4	2.1	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|84488934|ref|YP_447166.1|	-	0.002	18.5	0.1	0.0041	17.4	0.1	1.5	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
Dev_Cell_Death	PF10539.9	gi|84488934|ref|YP_447166.1|	-	0.0063	16.4	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	Development	and	cell	death	domain
DUF749	PF05370.11	gi|84488934|ref|YP_447166.1|	-	0.044	13.9	0.0	0.13	12.4	0.0	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF749)
DUF2520	PF10728.9	gi|84488934|ref|YP_447166.1|	-	0.09	12.6	0.1	0.22	11.3	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2520)
CM_2	PF01817.21	gi|84488935|ref|YP_447167.1|	-	2.6e-13	50.1	7.8	3.1e-13	49.9	7.8	1.1	1	0	0	1	1	1	1	Chorismate	mutase	type	II
TSC22	PF01166.18	gi|84488935|ref|YP_447167.1|	-	0.0071	16.6	1.8	0.012	15.9	0.2	2.1	1	1	2	3	3	3	1	TSC-22/dip/bun	family
GM_CSF	PF01109.17	gi|84488935|ref|YP_447167.1|	-	0.22	11.7	0.6	0.38	10.9	0.2	1.6	1	1	1	2	2	2	0	Granulocyte-macrophage	colony-stimulating	factor
Ribosomal_S17e	PF00833.18	gi|84488936|ref|YP_447168.1|	-	9.1e-18	64.3	0.1	9.8e-18	64.2	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	S17
AA_kinase	PF00696.28	gi|84488937|ref|YP_447169.1|	-	4.4e-49	167.3	1.6	6.5e-49	166.7	1.6	1.3	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT_7	PF13840.6	gi|84488937|ref|YP_447169.1|	-	1.1e-14	53.9	4.7	1.1e-09	37.9	0.2	3.0	4	0	0	4	4	4	2	ACT	domain
ACT	PF01842.25	gi|84488937|ref|YP_447169.1|	-	0.00036	20.2	0.4	0.0022	17.7	0.0	2.5	3	0	0	3	3	3	1	ACT	domain
ACT_4	PF13291.6	gi|84488937|ref|YP_447169.1|	-	0.0016	19.0	0.7	0.92	10.1	0.1	2.6	2	0	0	2	2	2	2	ACT	domain
ACT_6	PF13740.6	gi|84488937|ref|YP_447169.1|	-	0.0067	16.4	0.4	0.42	10.6	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
CtsR_C	PF17727.1	gi|84488937|ref|YP_447169.1|	-	0.12	12.5	1.1	3.2	7.9	0.0	2.9	3	0	0	3	3	3	0	CtsR	C-terminal	dimerization	domain
MafB	PF06255.13	gi|84488937|ref|YP_447169.1|	-	0.18	11.2	0.7	0.3	10.5	0.7	1.2	1	0	0	1	1	1	0	Neisseria	toxin	MafB
DHDPS	PF00701.22	gi|84488938|ref|YP_447170.1|	-	1.7e-87	292.8	0.5	1.9e-87	292.7	0.5	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
CutC	PF03932.14	gi|84488938|ref|YP_447170.1|	-	0.0041	16.6	0.0	0.007	15.9	0.0	1.3	1	0	0	1	1	1	1	CutC	family
DapB_C	PF05173.14	gi|84488939|ref|YP_447171.1|	-	1.2e-40	138.3	0.2	2e-40	137.6	0.2	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.20	gi|84488939|ref|YP_447171.1|	-	9.2e-34	116.2	2.7	9.2e-34	116.2	2.7	2.0	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
Sacchrp_dh_NADP	PF03435.18	gi|84488939|ref|YP_447171.1|	-	0.016	15.4	0.5	0.038	14.2	0.5	1.7	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Semialdhyde_dh	PF01118.24	gi|84488939|ref|YP_447171.1|	-	0.026	14.9	0.2	0.061	13.8	0.2	1.7	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.16	gi|84488939|ref|YP_447171.1|	-	0.03	15.0	1.1	0.11	13.1	1.1	2.0	1	1	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
ADH_zinc_N	PF00107.26	gi|84488939|ref|YP_447171.1|	-	0.057	13.4	2.5	0.24	11.4	0.3	2.8	2	1	1	3	3	3	0	Zinc-binding	dehydrogenase
Semialdhyde_dhC	PF02774.18	gi|84488940|ref|YP_447172.1|	-	7.2e-44	150.1	0.0	1.1e-43	149.5	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.24	gi|84488940|ref|YP_447172.1|	-	3e-30	105.1	0.0	4.9e-30	104.4	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|84488940|ref|YP_447172.1|	-	0.0019	18.3	0.0	0.0036	17.4	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
DXP_reductoisom	PF02670.16	gi|84488940|ref|YP_447172.1|	-	0.011	16.5	0.0	0.025	15.3	0.0	1.6	1	1	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Sacchrp_dh_NADP	PF03435.18	gi|84488940|ref|YP_447172.1|	-	0.016	15.5	0.0	0.03	14.6	0.0	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Gp_dh_C	PF02800.20	gi|84488940|ref|YP_447172.1|	-	0.051	13.2	0.1	0.18	11.4	0.0	1.8	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
PAP2	PF01569.21	gi|84488941|ref|YP_447173.1|	-	1.1e-20	73.8	3.0	1.1e-20	73.8	3.0	1.6	2	0	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.6	gi|84488941|ref|YP_447173.1|	-	2.1e-07	30.9	9.2	3.6e-06	26.8	9.2	2.0	1	1	0	1	1	1	1	PAP2	superfamily
PAP2_C	PF14360.6	gi|84488941|ref|YP_447173.1|	-	0.0055	17.2	2.2	0.0055	17.2	2.2	2.8	2	2	0	3	3	3	1	PAP2	superfamily	C-terminal
YIF1	PF03878.15	gi|84488941|ref|YP_447173.1|	-	2.4	7.6	7.9	0.25	10.9	3.9	1.4	2	0	0	2	2	2	0	YIF1
Wzy_C	PF04932.15	gi|84488941|ref|YP_447173.1|	-	8.4	6.0	9.1	1.9	8.1	2.1	2.1	2	0	0	2	2	2	0	O-Antigen	ligase
URO-D	PF01208.17	gi|84488942|ref|YP_447174.1|	-	8e-75	252.1	0.0	9.8e-75	251.8	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Spc7	PF08317.11	gi|84488943|ref|YP_447175.1|	-	2.2e-07	30.1	212.6	0.0029	16.5	13.4	10.9	1	1	10	11	11	11	10	Spc7	kinetochore	protein
PKcGMP_CC	PF16808.5	gi|84488943|ref|YP_447175.1|	-	1.3e-06	28.2	0.2	1.3e-06	28.2	0.2	20.3	22	3	3	25	25	25	4	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
TSC22	PF01166.18	gi|84488943|ref|YP_447175.1|	-	0.0088	16.3	0.2	0.0088	16.3	0.2	16.6	12	7	10	22	22	22	1	TSC-22/dip/bun	family
Fez1	PF06818.15	gi|84488943|ref|YP_447175.1|	-	0.022	15.2	177.6	0.037	14.5	19.4	9.8	1	1	7	8	8	8	0	Fez1
SlyX	PF04102.12	gi|84488943|ref|YP_447175.1|	-	0.023	15.3	2.0	0.023	15.3	2.0	16.8	6	4	11	18	18	18	0	SlyX
COMP	PF11598.8	gi|84488943|ref|YP_447175.1|	-	1.8	9.1	13.7	16	6.1	0.2	6.8	6	0	0	6	6	6	0	Cartilage	oligomeric	matrix	protein
ATG16	PF08614.11	gi|84488943|ref|YP_447175.1|	-	7.3	6.8	188.1	0.062	13.5	14.3	11.9	1	1	9	11	11	11	0	Autophagy	protein	16	(ATG16)
HrpB7	PF09486.10	gi|84488943|ref|YP_447175.1|	-	7.8	6.9	60.0	2.8	8.3	0.4	11.0	4	2	4	11	11	11	0	Bacterial	type	III	secretion	protein	(HrpB7)
Cpn60_TCP1	PF00118.24	gi|84488944|ref|YP_447176.1|	-	3.3e-177	590.0	23.1	3.7e-177	589.8	23.1	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Thiolase_N	PF00108.23	gi|84488946|ref|YP_447178.1|	-	1.8e-29	102.9	1.9	7.4e-29	100.9	1.9	1.9	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|84488946|ref|YP_447178.1|	-	7.6e-13	48.2	0.2	2.1e-12	46.8	0.2	1.8	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.10	gi|84488946|ref|YP_447178.1|	-	9.8e-06	25.3	0.5	0.0012	18.7	0.4	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ketoacyl-synt	PF00109.26	gi|84488946|ref|YP_447178.1|	-	0.00016	21.3	3.6	0.00038	20.1	1.7	2.3	1	1	2	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.11	gi|84488946|ref|YP_447178.1|	-	0.0037	16.0	0.1	0.0059	15.4	0.1	1.4	1	0	0	1	1	1	1	Stage	V	sporulation	protein	AD	(SpoVAD)
ACP_syn_III_C	PF08541.10	gi|84488947|ref|YP_447179.1|	-	6e-11	42.4	0.0	1.7e-10	40.9	0.0	1.8	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Thiolase_N	PF00108.23	gi|84488947|ref|YP_447179.1|	-	1.7e-05	24.4	0.1	2.5e-05	23.8	0.1	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_C	PF08540.10	gi|84488947|ref|YP_447179.1|	-	2.1e-05	24.3	0.2	0.0028	17.3	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.17	gi|84488947|ref|YP_447179.1|	-	6.1e-05	23.0	0.1	8.5e-05	22.5	0.1	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.10	gi|84488947|ref|YP_447179.1|	-	0.00031	20.5	1.2	0.00031	20.5	1.2	1.8	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Phosphatase	PF15698.5	gi|84488947|ref|YP_447179.1|	-	0.041	13.0	0.2	0.078	12.1	0.1	1.5	2	0	0	2	2	2	0	Phosphatase
Aft1_HRA	PF11786.8	gi|84488947|ref|YP_447179.1|	-	0.15	12.4	0.0	0.3	11.5	0.0	1.5	1	0	0	1	1	1	0	Aft1	HRA	domain
DUF5612	PF18462.1	gi|84488948|ref|YP_447180.1|	-	8.1e-40	135.9	3.9	1.2e-39	135.3	3.9	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5612)
ACT_4	PF13291.6	gi|84488948|ref|YP_447180.1|	-	0.0026	18.3	0.8	0.0059	17.2	0.1	1.9	2	0	0	2	2	2	1	ACT	domain
Peripla_BP_1	PF00532.21	gi|84488948|ref|YP_447180.1|	-	0.08	12.4	0.1	0.12	11.8	0.1	1.2	1	0	0	1	1	1	0	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
Conotoxin	PF02950.17	gi|84488949|ref|YP_447181.1|	-	0.074	14.1	0.5	0.42	11.7	0.0	2.2	2	0	0	2	2	2	0	Conotoxin
Holin_BlyA	PF05102.12	gi|84488949|ref|YP_447181.1|	-	0.093	12.7	1.3	0.2	11.7	1.3	1.5	1	0	0	1	1	1	0	holin,	BlyA	family
HTH_5	PF01022.20	gi|84488950|ref|YP_447182.1|	-	1.6e-19	69.5	1.3	3.4e-19	68.4	1.3	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|84488950|ref|YP_447182.1|	-	2.4e-10	40.3	0.0	3.5e-10	39.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|84488950|ref|YP_447182.1|	-	6.9e-05	22.3	0.4	0.00025	20.5	0.4	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|84488950|ref|YP_447182.1|	-	9.5e-05	22.2	0.0	0.00015	21.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.6	gi|84488950|ref|YP_447182.1|	-	0.00011	22.3	0.2	0.00019	21.5	0.2	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.6	gi|84488950|ref|YP_447182.1|	-	0.00019	21.8	0.0	0.00036	20.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|84488950|ref|YP_447182.1|	-	0.00095	19.0	0.0	0.0016	18.3	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.6	gi|84488950|ref|YP_447182.1|	-	0.001	18.8	0.0	0.0017	18.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
Fe_dep_repress	PF01325.19	gi|84488950|ref|YP_447182.1|	-	0.0031	17.7	0.0	0.0055	16.9	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_1	PF00126.27	gi|84488950|ref|YP_447182.1|	-	0.0051	16.7	0.1	0.0087	16.0	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Rrf2	PF02082.20	gi|84488950|ref|YP_447182.1|	-	0.0077	16.6	0.0	0.012	15.9	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.22	gi|84488950|ref|YP_447182.1|	-	0.028	14.3	0.0	0.051	13.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
RNA_pol_Rpc34	PF05158.12	gi|84488950|ref|YP_447182.1|	-	0.035	13.5	0.2	0.05	13.0	0.2	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
Sigma70_ECF	PF07638.11	gi|84488950|ref|YP_447182.1|	-	0.054	13.4	0.0	0.065	13.1	0.0	1.2	1	0	0	1	1	1	0	ECF	sigma	factor
DUF4423	PF14394.6	gi|84488950|ref|YP_447182.1|	-	0.058	13.1	0.1	0.069	12.9	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_Crp_2	PF13545.6	gi|84488950|ref|YP_447182.1|	-	0.062	13.3	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Penicillinase_R	PF03965.16	gi|84488950|ref|YP_447182.1|	-	0.078	13.3	0.0	0.13	12.6	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
E1-E2_ATPase	PF00122.20	gi|84488951|ref|YP_447183.1|	-	1.1e-50	171.7	3.8	1.1e-50	171.7	3.8	3.0	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|84488951|ref|YP_447183.1|	-	4.5e-36	125.1	1.0	7.2e-36	124.5	1.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PduV-EutP	PF10662.9	gi|84488951|ref|YP_447183.1|	-	0.002	17.9	0.3	0.0067	16.2	0.3	1.9	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
NAT	PF04768.13	gi|84488951|ref|YP_447183.1|	-	0.077	12.7	0.1	0.2	11.3	0.1	1.7	1	0	0	1	1	1	0	NAT,	N-acetyltransferase,	of	N-acetylglutamate	synthase
Amidase02_C	PF12123.8	gi|84488951|ref|YP_447183.1|	-	0.11	12.2	0.0	0.31	10.8	0.0	1.8	1	0	0	1	1	1	0	N-acetylmuramoyl-l-alanine	amidase
HAD	PF12710.7	gi|84488951|ref|YP_447183.1|	-	0.14	12.6	0.2	1.8	8.9	0.0	2.7	2	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
Organ_specific	PF10950.8	gi|84488951|ref|YP_447183.1|	-	0.66	10.7	4.7	1.7	9.4	0.6	2.6	2	0	0	2	2	2	0	Organ	specific	protein
Hydrolase_3	PF08282.12	gi|84488951|ref|YP_447183.1|	-	2.1	8.0	23.3	0.087	12.5	1.5	4.6	5	0	0	5	5	5	0	haloacid	dehalogenase-like	hydrolase
CPBP	PF02517.16	gi|84488951|ref|YP_447183.1|	-	8.4	6.8	8.4	0.58	10.6	2.4	2.2	2	1	0	2	2	2	0	CPBP	intramembrane	metalloprotease
CBFD_NFYB_HMF	PF00808.23	gi|84488952|ref|YP_447184.1|	-	1.9e-19	69.7	0.1	2e-19	69.6	0.1	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|84488952|ref|YP_447184.1|	-	3.1e-11	43.7	0.0	3.3e-11	43.7	0.0	1.0	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-T_C	PF15511.6	gi|84488952|ref|YP_447184.1|	-	2.8e-08	33.8	0.0	3e-08	33.8	0.0	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TFIID_20kDa	PF03847.13	gi|84488952|ref|YP_447184.1|	-	4.7e-06	27.0	0.1	5.4e-06	26.8	0.1	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	TFIID	subunit	A
TFIID-31kDa	PF02291.15	gi|84488952|ref|YP_447184.1|	-	5.7e-06	26.4	0.0	6.5e-06	26.2	0.0	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
CENP-S	PF15630.6	gi|84488952|ref|YP_447184.1|	-	6.6e-06	26.4	0.0	8.4e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	CENP-S	protein
Bromo_TP	PF07524.13	gi|84488952|ref|YP_447184.1|	-	2.6e-05	24.1	0.0	3e-05	23.9	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
TAF	PF02969.17	gi|84488952|ref|YP_447184.1|	-	2.7e-05	24.2	0.1	2.9e-05	24.1	0.1	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
tRNA-synt_1e	PF01406.19	gi|84488953|ref|YP_447185.1|	-	3.2e-121	404.3	1.0	5.6e-121	403.5	1.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|84488953|ref|YP_447185.1|	-	6.1e-24	84.5	1.6	7.4e-13	48.0	0.9	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.11	gi|84488953|ref|YP_447185.1|	-	1.3e-11	44.8	1.0	3.3e-11	43.5	1.0	1.7	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1	PF00133.22	gi|84488953|ref|YP_447185.1|	-	3.9e-09	35.3	0.1	1.8e-05	23.2	0.0	2.4	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.18	gi|84488953|ref|YP_447185.1|	-	1.2e-08	34.3	0.1	7.4e-07	28.4	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
Cor1	PF04803.12	gi|84488953|ref|YP_447185.1|	-	0.082	13.1	0.5	0.28	11.4	0.5	1.9	1	0	0	1	1	1	0	Cor1/Xlr/Xmr	conserved	region
tRNA-synt_1c	PF00749.21	gi|84488953|ref|YP_447185.1|	-	0.097	11.6	2.9	0.41	9.5	2.1	2.4	2	1	0	2	2	2	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
DUF1366	PF07104.11	gi|84488953|ref|YP_447185.1|	-	3.5	7.4	7.1	12	5.6	0.2	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1366)
Fer4_8	PF13183.6	gi|84488954|ref|YP_447186.1|	-	1.1e-10	41.7	5.4	2.5e-10	40.6	5.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84488954|ref|YP_447186.1|	-	1.8e-07	31.2	7.0	3.3e-07	30.4	7.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84488954|ref|YP_447186.1|	-	2.4e-07	31.3	9.7	4.2e-07	30.4	8.9	1.9	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84488954|ref|YP_447186.1|	-	4.4e-07	30.3	6.7	8.3e-07	29.5	6.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84488954|ref|YP_447186.1|	-	3.2e-06	28.0	9.9	2.6e-05	25.1	10.2	2.4	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|84488954|ref|YP_447186.1|	-	6.3e-05	23.0	12.2	0.00018	21.5	11.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84488954|ref|YP_447186.1|	-	0.00016	22.4	1.5	0.31	11.9	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84488954|ref|YP_447186.1|	-	0.00017	21.2	16.8	0.004	16.9	2.8	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84488954|ref|YP_447186.1|	-	0.00018	21.4	10.4	0.0015	18.5	2.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84488954|ref|YP_447186.1|	-	0.00076	19.8	15.0	0.0027	18.1	1.8	2.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84488954|ref|YP_447186.1|	-	0.00079	19.5	11.0	0.0027	17.8	11.0	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84488954|ref|YP_447186.1|	-	0.006	16.6	14.8	0.033	14.3	4.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
DUF5534	PF17686.1	gi|84488954|ref|YP_447186.1|	-	0.038	14.3	0.3	0.053	13.8	0.3	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5534)
Fer4_18	PF13746.6	gi|84488954|ref|YP_447186.1|	-	0.23	11.6	8.2	1.8	8.8	0.9	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84488954|ref|YP_447186.1|	-	0.45	11.1	5.1	1.5	9.4	0.3	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
SCIFF	PF13165.6	gi|84488954|ref|YP_447186.1|	-	1.9	8.5	8.1	8.4	6.4	1.0	2.5	2	0	0	2	2	2	0	Six-cysteine	peptide	SCIFF
Fer4_3	PF12798.7	gi|84488954|ref|YP_447186.1|	-	7.8	7.7	19.1	10	7.4	5.2	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CCG	PF02754.16	gi|84488955|ref|YP_447187.1|	-	6.2e-20	71.2	7.0	2.1e-11	43.9	0.1	2.9	4	0	0	4	4	4	2	Cysteine-rich	domain
FAM92	PF06730.11	gi|84488955|ref|YP_447187.1|	-	0.058	12.8	0.6	0.092	12.1	0.6	1.3	1	0	0	1	1	1	0	FAM92	protein
Thioredoxin_3	PF13192.6	gi|84488955|ref|YP_447187.1|	-	1.2	9.3	5.1	21	5.2	0.4	3.5	3	0	0	3	3	3	0	Thioredoxin	domain
RPA_interact_C	PF14768.6	gi|84488955|ref|YP_447187.1|	-	4.2	8.0	8.8	6.9	7.3	0.0	3.7	2	2	3	5	5	5	0	Replication	protein	A	interacting	C-terminal
FlpD	PF02662.16	gi|84488956|ref|YP_447188.1|	-	1.6e-22	79.8	0.1	1.9e-21	76.3	0.0	2.8	3	0	0	3	3	2	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Fer4	PF00037.27	gi|84488956|ref|YP_447188.1|	-	2.8e-19	68.1	42.8	1.3e-07	31.1	3.4	5.0	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84488956|ref|YP_447188.1|	-	1.8e-15	57.3	34.9	4.2e-06	27.3	11.5	4.8	3	2	2	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84488956|ref|YP_447188.1|	-	2.8e-14	53.8	25.7	5.1e-05	24.1	0.3	5.5	5	0	0	5	5	5	4	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|84488956|ref|YP_447188.1|	-	4.9e-14	52.2	34.6	0.0001	22.3	1.1	5.1	3	2	3	6	6	6	5	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84488956|ref|YP_447188.1|	-	8.3e-14	51.5	35.0	2.1e-09	37.4	7.7	3.7	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Pyr_redox_2	PF07992.14	gi|84488956|ref|YP_447188.1|	-	1.3e-13	50.9	4.3	1.4e-12	47.5	1.6	3.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_6	PF12837.7	gi|84488956|ref|YP_447188.1|	-	1.5e-13	50.2	47.0	7.9e-05	22.6	3.3	5.3	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84488956|ref|YP_447188.1|	-	3e-11	42.7	50.1	2.6e-06	27.2	4.3	5.3	6	0	0	6	6	4	4	4Fe-4S	binding	domain
DAO	PF01266.24	gi|84488956|ref|YP_447188.1|	-	4.6e-10	39.6	0.0	1.2e-08	35.0	0.0	2.6	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|84488956|ref|YP_447188.1|	-	1.8e-09	37.7	0.0	4e-09	36.6	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_21	PF14697.6	gi|84488956|ref|YP_447188.1|	-	4.5e-09	36.3	44.7	6.3e-06	26.2	13.7	4.4	4	1	1	5	5	4	3	4Fe-4S	dicluster	domain
Thi4	PF01946.17	gi|84488956|ref|YP_447188.1|	-	1.4e-08	34.2	0.0	4e-08	32.8	0.0	1.7	1	0	0	1	1	1	1	Thi4	family
FAD_oxidored	PF12831.7	gi|84488956|ref|YP_447188.1|	-	4.1e-08	33.0	4.7	3.1e-07	30.1	2.9	2.1	1	1	1	2	2	2	1	FAD	dependent	oxidoreductase
Fer4_8	PF13183.6	gi|84488956|ref|YP_447188.1|	-	8.7e-07	29.3	34.8	0.00079	19.8	13.7	4.7	2	2	3	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84488956|ref|YP_447188.1|	-	1.1e-06	28.6	39.0	0.0099	16.3	4.0	4.9	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|84488956|ref|YP_447188.1|	-	5e-06	27.3	27.5	0.037	14.9	0.8	4.7	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
FAD_binding_2	PF00890.24	gi|84488956|ref|YP_447188.1|	-	5.9e-06	25.6	2.7	9.1e-06	25.0	2.7	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_15	PF13459.6	gi|84488956|ref|YP_447188.1|	-	1.4e-05	25.7	20.0	0.01	16.6	0.7	4.9	4	0	0	4	4	4	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|84488956|ref|YP_447188.1|	-	2.5e-05	24.7	36.3	0.0066	17.0	11.5	5.0	3	2	4	7	7	6	6	4Fe-4S	dicluster	domain
Pyr_redox	PF00070.27	gi|84488956|ref|YP_447188.1|	-	8.2e-05	23.1	8.1	0.00095	19.7	1.1	3.8	5	0	0	5	5	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|84488956|ref|YP_447188.1|	-	0.00015	21.2	0.5	0.00023	20.5	0.5	1.2	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|84488956|ref|YP_447188.1|	-	0.00016	20.6	1.9	0.00026	19.8	1.9	1.3	1	0	0	1	1	1	1	HI0933-like	protein
GIDA	PF01134.22	gi|84488956|ref|YP_447188.1|	-	0.00027	20.1	0.2	0.00052	19.2	0.2	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|84488956|ref|YP_447188.1|	-	0.00089	18.6	0.0	0.0022	17.3	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.24	gi|84488956|ref|YP_447188.1|	-	0.0011	18.4	0.0	0.0019	17.6	0.0	1.3	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
ApbA	PF02558.16	gi|84488956|ref|YP_447188.1|	-	0.0038	16.9	0.7	0.055	13.1	0.0	2.4	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.21	gi|84488956|ref|YP_447188.1|	-	0.004	16.5	0.1	0.011	15.1	0.1	1.7	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_9	PF13454.6	gi|84488956|ref|YP_447188.1|	-	0.0059	16.6	0.6	0.066	13.2	0.1	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Trp_halogenase	PF04820.14	gi|84488956|ref|YP_447188.1|	-	0.018	13.9	0.2	0.031	13.1	0.2	1.4	1	0	0	1	1	1	0	Tryptophan	halogenase
Fer4_13	PF13370.6	gi|84488956|ref|YP_447188.1|	-	0.041	14.4	37.0	0.16	12.5	3.8	4.8	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|84488956|ref|YP_447188.1|	-	0.054	13.7	28.0	0.66	10.2	3.1	3.8	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
3HCDH_N	PF02737.18	gi|84488956|ref|YP_447188.1|	-	0.059	13.3	0.3	0.14	12.1	0.3	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.12	gi|84488956|ref|YP_447188.1|	-	0.13	11.3	0.2	0.19	10.7	0.2	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
NAD_binding_7	PF13241.6	gi|84488956|ref|YP_447188.1|	-	0.2	12.1	1.1	0.6	10.6	0.1	2.4	3	0	0	3	3	2	0	Putative	NAD(P)-binding
K_oxygenase	PF13434.6	gi|84488956|ref|YP_447188.1|	-	0.23	10.6	1.0	4	6.5	0.0	2.6	3	0	0	3	3	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
UvrD-helicase	PF00580.21	gi|84488957|ref|YP_447189.1|	-	5.9e-39	134.4	3.0	1.3e-37	130.0	3.0	2.5	1	1	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.6	gi|84488957|ref|YP_447189.1|	-	1.3e-20	74.2	0.8	6.3e-20	72.0	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
UvrD_C	PF13361.6	gi|84488957|ref|YP_447189.1|	-	1.2e-15	57.7	1.9	2.3e-08	33.8	0.0	3.7	3	1	0	3	3	3	2	UvrD-like	helicase	C-terminal	domain
UvrD_C_2	PF13538.6	gi|84488957|ref|YP_447189.1|	-	1.1e-07	31.6	0.1	0.00082	19.2	0.0	2.7	3	0	0	3	3	3	2	UvrD-like	helicase	C-terminal	domain
AAA_12	PF13087.6	gi|84488957|ref|YP_447189.1|	-	1.9e-05	24.4	0.7	0.0041	16.8	0.0	2.9	3	0	0	3	3	3	2	AAA	domain
AAA_30	PF13604.6	gi|84488957|ref|YP_447189.1|	-	1.9e-05	24.5	0.0	0.00044	20.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.9	gi|84488957|ref|YP_447189.1|	-	0.00076	18.8	0.2	1.6	7.9	0.0	3.8	4	0	0	4	4	4	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_11	PF13086.6	gi|84488957|ref|YP_447189.1|	-	0.004	17.0	0.0	0.014	15.2	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
Viral_helicase1	PF01443.18	gi|84488957|ref|YP_447189.1|	-	0.051	13.3	0.0	45	3.7	0.0	4.0	4	0	0	4	4	4	0	Viral	(Superfamily	1)	RNA	helicase
DEAD	PF00270.29	gi|84488957|ref|YP_447189.1|	-	0.088	12.6	0.3	0.98	9.2	0.3	2.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|84488957|ref|YP_447189.1|	-	0.15	12.0	2.8	4.4	7.3	0.5	3.3	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
CENP-L	PF13092.6	gi|84488958|ref|YP_447190.1|	-	0.19	11.9	0.0	0.32	11.2	0.0	1.3	1	0	0	1	1	1	0	Kinetochore	complex	Sim4	subunit	Fta1
Cpn60_TCP1	PF00118.24	gi|84488959|ref|YP_447191.1|	-	3.3e-157	524.1	19.8	3.8e-157	523.9	19.8	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
PAP2	PF01569.21	gi|84488961|ref|YP_447193.1|	-	0.013	15.2	0.2	0.013	15.2	0.2	2.1	2	1	0	2	2	2	0	PAP2	superfamily
DUF4131	PF13567.6	gi|84488961|ref|YP_447193.1|	-	0.83	9.3	4.1	7.9	6.1	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
LysE	PF01810.18	gi|84488962|ref|YP_447194.1|	-	0.021	14.3	0.2	0.045	13.2	0.0	1.7	2	0	0	2	2	2	0	LysE	type	translocator
Utp8	PF10395.9	gi|84488962|ref|YP_447194.1|	-	0.055	12.0	1.1	0.079	11.5	1.1	1.1	1	0	0	1	1	1	0	Utp8	family
Histidinol_dh	PF00815.20	gi|84488963|ref|YP_447195.1|	-	1.5e-163	544.6	3.6	1.7e-163	544.4	3.6	1.0	1	0	0	1	1	1	1	Histidinol	dehydrogenase
DUF2746	PF10874.8	gi|84488963|ref|YP_447195.1|	-	0.084	13.3	0.8	0.21	12.0	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2746)
tRNA-synt_2	PF00152.20	gi|84488964|ref|YP_447196.1|	-	2.3e-92	309.4	0.5	2.8e-92	309.2	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|84488964|ref|YP_447196.1|	-	1.2e-11	44.4	0.1	2e-11	43.7	0.1	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|84488964|ref|YP_447196.1|	-	6.1e-05	22.6	0.2	0.019	14.5	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA_anti-like	PF12869.7	gi|84488964|ref|YP_447196.1|	-	0.012	15.2	0.0	0.021	14.4	0.0	1.3	1	0	0	1	1	1	0	tRNA_anti-like
LZ3wCH	PF18517.1	gi|84488964|ref|YP_447196.1|	-	0.05	13.7	0.0	0.15	12.2	0.0	1.9	1	0	0	1	1	1	0	Leucine	zipper	with	capping	helix	domain
RIG-I_C	PF18119.1	gi|84488964|ref|YP_447196.1|	-	0.085	12.9	0.3	0.2	11.7	0.3	1.6	1	0	0	1	1	1	0	RIG-I	receptor	C-terminal	domain
DUF1462	PF07315.11	gi|84488965|ref|YP_447197.1|	-	0.081	13.2	0.4	0.13	12.6	0.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1462)
RNase_T	PF00929.24	gi|84488969|ref|YP_447201.1|	-	6.7e-17	62.5	0.0	1.9e-16	61.0	0.0	1.8	1	0	0	1	1	1	1	Exonuclease
DUF5051	PF16473.5	gi|84488969|ref|YP_447201.1|	-	3.5e-07	30.4	0.1	9.5e-07	28.9	0.0	1.8	2	0	0	2	2	2	1	3'	exoribonuclease,	RNase	T-like
RNase_H_2	PF13482.6	gi|84488969|ref|YP_447201.1|	-	4.2e-05	23.6	0.3	0.00013	22.0	0.3	1.9	1	1	0	1	1	1	1	RNase_H	superfamily
BRCT	PF00533.26	gi|84488969|ref|YP_447201.1|	-	0.00087	19.6	0.1	0.004	17.5	0.1	2.2	1	0	0	1	1	1	1	BRCA1	C	Terminus	(BRCT)	domain
DUF957	PF06117.11	gi|84488969|ref|YP_447201.1|	-	0.00094	18.7	3.1	0.049	13.2	0.1	3.4	3	0	0	3	3	3	1	Enterobacterial	protein	of	unknown	function	(DUF957)
CP2	PF04516.15	gi|84488969|ref|YP_447201.1|	-	0.025	13.9	0.2	0.55	9.5	0.0	2.2	1	1	1	2	2	2	0	CP2	transcription	factor
DNA_pol_A_exo1	PF01612.20	gi|84488969|ref|YP_447201.1|	-	0.04	13.6	0.3	0.16	11.6	0.0	2.0	2	1	1	3	3	3	0	3'-5'	exonuclease
CarboxypepD_reg	PF13620.6	gi|84488970|ref|YP_447202.1|	-	1.1e-69	230.7	118.2	1.2e-11	44.7	0.7	14.4	14	1	1	15	15	15	10	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|84488970|ref|YP_447202.1|	-	2.1e-57	191.3	203.4	1e-06	28.8	10.6	16.6	16	0	0	16	16	16	14	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|84488970|ref|YP_447202.1|	-	2.8e-32	110.9	197.2	7.6e-06	26.2	4.4	18.4	17	3	2	19	19	19	13	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|84488970|ref|YP_447202.1|	-	1.9e-31	107.9	98.3	2.5e-05	24.2	2.1	12.7	12	0	0	12	12	12	10	CarboxypepD_reg-like	domain
MG4	PF17789.1	gi|84488970|ref|YP_447202.1|	-	2.6e-17	62.7	88.5	0.0015	18.7	0.8	14.2	14	0	0	14	14	14	10	Macroglobulin	domain	MG4
Big_1	PF02369.16	gi|84488970|ref|YP_447202.1|	-	2.7e-11	43.3	201.0	0.0012	18.8	0.4	19.1	17	5	3	20	20	20	9	Bacterial	Ig-like	domain	(group	1)
MG2	PF01835.19	gi|84488970|ref|YP_447202.1|	-	2e-06	28.2	23.5	5.3	7.6	0.1	10.7	11	1	0	11	11	10	4	MG2	domain
CooC_C	PF15976.5	gi|84488970|ref|YP_447202.1|	-	6.1e-05	23.0	48.0	0.82	9.8	0.6	11.4	12	1	1	13	13	13	4	CS1-pili	formation	C-terminal
DUF1416	PF07210.12	gi|84488970|ref|YP_447202.1|	-	0.0092	15.9	3.0	0.11	12.4	0.1	4.4	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF1416)
Big_6	PF17936.1	gi|84488970|ref|YP_447202.1|	-	0.036	14.4	94.3	0.06	13.6	0.8	13.8	16	0	0	16	16	16	0	Bacterial	Ig	domain
MadM	PF03818.13	gi|84488970|ref|YP_447202.1|	-	0.041	13.7	3.1	40	4.2	0.1	3.7	3	0	0	3	3	3	0	Malonate/sodium	symporter	MadM	subunit
HalOD1	PF18545.1	gi|84488970|ref|YP_447202.1|	-	0.22	11.8	7.5	3.4	8.0	0.0	5.0	5	0	0	5	5	3	0	Halobacterial	output	domain	1
Pollen_Ole_e_I	PF01190.17	gi|84488970|ref|YP_447202.1|	-	1.1	9.6	29.7	47	4.5	0.1	9.7	10	0	0	10	10	10	0	Pollen	proteins	Ole	e	I	like
DUF4198	PF10670.9	gi|84488970|ref|YP_447202.1|	-	4.8	7.5	22.0	25	5.2	0.5	8.3	6	2	4	10	10	10	0	Domain	of	unknown	function	(DUF4198)
TTR-52	PF01060.23	gi|84488970|ref|YP_447202.1|	-	6.6	7.5	34.9	14	6.5	0.2	10.0	10	0	0	10	10	10	0	Transthyretin-like	family
Pilin_N	PF07790.11	gi|84488971|ref|YP_447203.1|	-	0.0041	18.0	1.6	0.0067	17.3	0.9	1.7	1	1	1	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
GSH_synthase	PF03199.15	gi|84488971|ref|YP_447203.1|	-	0.0042	17.5	0.2	0.0062	17.0	0.2	1.5	1	1	0	1	1	1	1	Eukaryotic	glutathione	synthase
MethyltransfD12	PF02086.15	gi|84488972|ref|YP_447204.1|	-	3.7e-60	203.8	15.7	4.6e-60	203.5	15.7	1.0	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
YojJ	PF10372.9	gi|84488972|ref|YP_447204.1|	-	0.033	14.3	1.0	0.15	12.2	0.3	2.3	2	0	0	2	2	2	0	Bacterial	membrane-spanning	protein	N-terminus
DpnII	PF04556.12	gi|84488973|ref|YP_447205.1|	-	5.8e-78	262.0	14.2	8.6e-78	261.5	14.2	1.2	1	0	0	1	1	1	1	DpnII	restriction	endonuclease
HSDR_N_2	PF13588.6	gi|84488973|ref|YP_447205.1|	-	0.0065	16.4	0.0	0.021	14.8	0.0	1.9	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
MTES_1575	PF18741.1	gi|84488973|ref|YP_447205.1|	-	0.0093	16.1	0.0	0.021	15.0	0.0	1.7	1	0	0	1	1	1	1	REase_MTES_1575
DUF4143	PF13635.6	gi|84488973|ref|YP_447205.1|	-	0.0093	16.1	0.1	0.38	10.9	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
Big_3_5	PF16640.5	gi|84488974|ref|YP_447206.1|	-	5.7e-17	61.7	106.2	2.5e-06	27.6	0.6	11.7	10	2	2	12	12	12	6	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|84488974|ref|YP_447206.1|	-	4.6e-13	49.3	280.9	6.5e-06	26.1	47.7	17.2	6	4	11	17	17	17	8	Right	handed	beta	helix	region
Big_1	PF02369.16	gi|84488974|ref|YP_447206.1|	-	3e-06	27.1	4.0	1.4e-05	25.0	0.4	11.6	11	1	1	12	12	12	2	Bacterial	Ig-like	domain	(group	1)
zf-CCCH_7	PF18586.1	gi|84488974|ref|YP_447206.1|	-	0.59	10.5	3.8	3.5	8.0	0.5	3.7	3	0	0	3	3	3	0	Chromatin	remodeling	factor	Mit1	C-terminal	Zn	finger	1
Oscp1	PF10188.9	gi|84488975|ref|YP_447207.1|	-	0.64	10.1	11.4	0.047	13.8	1.5	3.0	2	2	0	3	3	3	0	Organic	solute	transport	protein	1
Tox-REase-2	PF15646.6	gi|84488975|ref|YP_447207.1|	-	1.3	9.2	8.8	0.33	11.1	0.9	2.6	2	1	1	3	3	3	0	Restriction	endonuclease	fold	toxin	2
Fer4	PF00037.27	gi|84488976|ref|YP_447208.1|	-	2.4e-19	68.3	20.1	1.4e-11	43.6	5.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84488976|ref|YP_447208.1|	-	3.2e-13	49.1	17.7	2.5e-08	33.6	4.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84488976|ref|YP_447208.1|	-	5.1e-12	45.1	16.4	2.4e-07	30.4	4.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84488976|ref|YP_447208.1|	-	9.2e-12	44.9	28.8	3.4e-08	33.5	16.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84488976|ref|YP_447208.1|	-	3.7e-11	43.0	24.1	1.4e-08	34.7	13.9	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84488976|ref|YP_447208.1|	-	4.5e-11	43.2	27.1	5.4e-09	36.5	15.3	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84488976|ref|YP_447208.1|	-	1.3e-10	42.1	12.7	3.4e-05	24.7	3.3	2.0	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|84488976|ref|YP_447208.1|	-	2.1e-09	37.3	13.8	2.3e-05	24.4	3.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84488976|ref|YP_447208.1|	-	4.4e-09	36.1	13.4	0.00019	21.7	1.3	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84488976|ref|YP_447208.1|	-	5.1e-07	30.1	9.8	0.0027	18.1	1.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84488976|ref|YP_447208.1|	-	1.2e-05	25.7	17.9	0.0057	17.2	4.9	2.5	2	1	1	3	3	3	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|84488976|ref|YP_447208.1|	-	2.1e-05	25.3	8.2	0.0036	18.1	1.3	2.0	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84488976|ref|YP_447208.1|	-	0.0001	23.0	21.6	0.015	16.2	6.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84488976|ref|YP_447208.1|	-	0.00012	22.6	14.0	0.026	15.1	2.9	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84488976|ref|YP_447208.1|	-	0.0049	17.0	13.3	0.014	15.6	13.3	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84488976|ref|YP_447208.1|	-	0.0058	17.3	18.1	0.016	15.9	5.0	2.8	2	2	0	2	2	2	1	4Fe-4S	single	cluster	domain
ETF_QO	PF05187.13	gi|84488976|ref|YP_447208.1|	-	3.7	7.7	7.5	0.87	9.8	0.3	2.0	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
SSF	PF00474.17	gi|84488977|ref|YP_447209.1|	-	6.1e-59	199.9	40.1	8.8e-59	199.4	40.1	1.2	1	0	0	1	1	1	1	Sodium:solute	symporter	family
HTH_18	PF12833.7	gi|84488978|ref|YP_447210.1|	-	2.8e-19	69.2	0.0	4.4e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_AraC	PF00165.23	gi|84488978|ref|YP_447210.1|	-	1.7e-09	37.5	0.1	1e-07	31.9	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
DUF2573	PF10835.8	gi|84488978|ref|YP_447210.1|	-	0.054	13.8	0.3	0.13	12.6	0.3	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2573)
HTH_19	PF12844.7	gi|84488978|ref|YP_447210.1|	-	0.27	11.3	3.4	0.85	9.7	0.1	3.3	3	1	0	3	3	3	0	Helix-turn-helix	domain
DEAD_assoc	PF08494.11	gi|84488979|ref|YP_447211.1|	-	1.7e-56	191.1	0.0	2.5e-56	190.5	0.0	1.3	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.29	gi|84488979|ref|YP_447211.1|	-	7.6e-30	104.0	0.1	7.9e-29	100.6	0.0	2.6	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|84488979|ref|YP_447211.1|	-	1.3e-18	67.3	0.8	2e-17	63.5	0.1	3.0	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|84488979|ref|YP_447211.1|	-	1.5e-09	38.1	0.1	7.6e-09	35.8	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.16	gi|84488979|ref|YP_447211.1|	-	0.065	12.7	0.1	0.26	10.7	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
T2SSE	PF00437.20	gi|84488979|ref|YP_447211.1|	-	0.11	11.6	0.9	0.25	10.4	0.2	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
UvrD-helicase	PF00580.21	gi|84488979|ref|YP_447211.1|	-	0.18	11.3	2.2	0.23	10.9	0.1	2.2	3	0	0	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.6	gi|84488979|ref|YP_447211.1|	-	0.2	12.0	0.0	1.5	9.1	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
Metallophos_2	PF12850.7	gi|84488980|ref|YP_447212.1|	-	1.8e-06	28.2	0.1	2.5e-06	27.8	0.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|84488980|ref|YP_447212.1|	-	8.6e-06	26.4	6.3	2e-05	25.2	2.5	2.2	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
SAUGI	PF06106.11	gi|84488980|ref|YP_447212.1|	-	0.13	12.7	3.3	8	7.0	0.1	2.6	2	1	0	2	2	2	0	S.	aureus	uracil	DNA	glycosylase	inhibitor
HEAT_2	PF13646.6	gi|84488982|ref|YP_447214.1|	-	1.1e-35	121.9	2.9	9.1e-15	54.8	0.3	3.1	1	1	2	3	3	3	3	HEAT	repeats
HEAT	PF02985.22	gi|84488982|ref|YP_447214.1|	-	3.2e-19	67.4	0.0	0.0003	20.8	0.0	5.3	5	0	0	5	5	5	4	HEAT	repeat
HEAT_PBS	PF03130.16	gi|84488982|ref|YP_447214.1|	-	4e-18	64.2	0.0	0.001	19.5	0.0	5.2	5	1	0	5	5	5	3	PBS	lyase	HEAT-like	repeat
HEAT_EZ	PF13513.6	gi|84488982|ref|YP_447214.1|	-	5.1e-09	36.4	0.2	0.065	13.8	0.0	4.6	3	2	2	5	5	5	4	HEAT-like	repeat
Arm	PF00514.23	gi|84488982|ref|YP_447214.1|	-	3.1e-06	27.0	0.1	6	7.1	0.0	4.9	3	2	2	5	5	5	2	Armadillo/beta-catenin-like	repeat
API5	PF05918.11	gi|84488982|ref|YP_447214.1|	-	8.8e-05	21.5	0.5	0.11	11.2	0.1	2.4	1	1	0	2	2	2	2	Apoptosis	inhibitory	protein	5	(API5)
Vac14_Fab1_bd	PF12755.7	gi|84488982|ref|YP_447214.1|	-	0.00046	20.7	0.0	0.54	10.9	0.0	3.0	1	1	3	4	4	4	1	Vacuolar	14	Fab1-binding	region
Cnd1	PF12717.7	gi|84488982|ref|YP_447214.1|	-	0.00081	19.5	0.1	0.8	9.7	0.0	2.9	1	1	1	2	2	2	2	non-SMC	mitotic	condensation	complex	subunit	1
Adaptin_N	PF01602.20	gi|84488982|ref|YP_447214.1|	-	0.001	17.8	0.4	0.025	13.2	0.4	2.4	1	1	0	1	1	1	1	Adaptin	N	terminal	region
ACC_central	PF08326.12	gi|84488982|ref|YP_447214.1|	-	0.0013	17.0	0.1	0.002	16.4	0.1	1.2	1	0	0	1	1	1	1	Acetyl-CoA	carboxylase,	central	region
Aconitase_B_N	PF11791.8	gi|84488982|ref|YP_447214.1|	-	0.0032	17.6	0.3	0.29	11.2	0.0	2.8	2	1	1	3	3	3	1	Aconitate	B	N-terminal	domain
TAF6_C	PF07571.13	gi|84488982|ref|YP_447214.1|	-	0.058	13.7	0.0	12	6.3	0.0	3.2	2	1	1	3	3	3	0	TAF6	C-terminal	HEAT	repeat	domain
FAM25	PF15825.5	gi|84488982|ref|YP_447214.1|	-	2.8	8.4	6.7	16	5.9	0.1	3.0	3	1	0	3	3	3	0	FAM25	family
CarboxypepD_reg	PF13620.6	gi|84488983|ref|YP_447215.1|	-	5e-63	209.4	100.1	1.1e-06	28.9	2.6	16.6	16	0	0	16	16	16	14	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|84488983|ref|YP_447215.1|	-	1.9e-58	194.4	108.6	5.8e-08	32.6	2.0	19.4	18	1	0	18	18	18	16	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|84488983|ref|YP_447215.1|	-	1.6e-43	146.7	145.9	4.1e-05	23.7	4.7	17.8	13	4	4	17	17	17	15	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|84488983|ref|YP_447215.1|	-	7.6e-27	93.5	142.1	1.5e-05	25.2	1.9	19.0	15	3	3	19	19	19	12	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|84488983|ref|YP_447215.1|	-	5.8e-13	48.7	149.3	0.017	15.1	1.1	16.9	17	1	0	17	17	17	11	CarboxypepD_reg-like	domain
Dioxygenase_C	PF00775.21	gi|84488983|ref|YP_447215.1|	-	9.8e-11	41.4	17.8	1.5	8.2	0.0	13.1	12	1	1	13	13	13	2	Dioxygenase
phage_tail_N	PF08400.10	gi|84488983|ref|YP_447215.1|	-	0.0011	18.9	0.9	0.0011	18.9	0.9	10.3	11	0	0	11	11	11	1	Prophage	tail	fibre	N-terminal
MG2	PF01835.19	gi|84488983|ref|YP_447215.1|	-	0.0019	18.6	2.2	66	4.0	0.0	7.8	7	0	0	7	7	7	0	MG2	domain
GARS_N	PF02844.15	gi|84488983|ref|YP_447215.1|	-	6.4	7.6	8.3	56	4.6	0.1	5.2	5	0	0	5	5	5	0	Phosphoribosylglycinamide	synthetase,	N	domain
CN_hydrolase	PF00795.22	gi|84488984|ref|YP_447216.1|	-	1.3e-63	214.8	0.0	1.4e-63	214.7	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF3875	PF12991.7	gi|84488984|ref|YP_447216.1|	-	0.043	13.8	0.1	0.28	11.2	0.0	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3875)
DUF1863	PF08937.11	gi|84488985|ref|YP_447217.1|	-	0.0012	19.2	0.2	0.0036	17.6	0.2	1.8	1	1	0	1	1	1	1	MTH538	TIR-like	domain	(DUF1863)
NucS	PF01939.16	gi|84488986|ref|YP_447218.1|	-	2.1e-77	259.6	0.0	2.3e-77	259.4	0.0	1.0	1	0	0	1	1	1	1	Endonuclease	NucS
PDDEXK_9	PF08011.11	gi|84488986|ref|YP_447218.1|	-	0.00064	19.6	0.1	0.0012	18.7	0.1	1.4	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
UPF0102	PF02021.17	gi|84488986|ref|YP_447218.1|	-	0.097	12.9	0.0	0.2	11.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
Imm74	PF15603.6	gi|84488986|ref|YP_447218.1|	-	0.1	12.8	0.3	0.44	10.8	0.1	2.2	2	1	0	2	2	2	0	Immunity	protein	74
Wzy_C	PF04932.15	gi|84488987|ref|YP_447219.1|	-	0.001	18.7	2.7	0.0016	18.1	2.7	1.3	1	1	0	1	1	1	1	O-Antigen	ligase
LMBR1	PF04791.16	gi|84488987|ref|YP_447219.1|	-	0.012	14.6	0.0	0.023	13.6	0.0	1.5	1	1	0	1	1	1	0	LMBR1-like	membrane	protein
GMC_oxred_N	PF00732.19	gi|84488988|ref|YP_447220.1|	-	7.8e-20	71.4	0.0	6.7e-18	65.1	0.0	2.3	1	1	0	1	1	1	1	GMC	oxidoreductase
DAO	PF01266.24	gi|84488988|ref|YP_447220.1|	-	6.9e-12	45.6	0.9	3.7e-10	39.9	0.8	2.3	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|84488988|ref|YP_447220.1|	-	2.4e-10	40.1	0.9	1.5e-07	30.9	0.1	2.5	2	0	0	2	2	2	2	Thi4	family
Pyr_redox_2	PF07992.14	gi|84488988|ref|YP_447220.1|	-	2.4e-09	36.9	0.8	0.00066	19.0	0.0	3.0	3	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|84488988|ref|YP_447220.1|	-	6.7e-08	32.0	0.2	0.00026	20.2	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|84488988|ref|YP_447220.1|	-	8.4e-08	31.8	0.1	0.0027	17.0	0.0	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GMC_oxred_C	PF05199.13	gi|84488988|ref|YP_447220.1|	-	7.8e-07	29.7	0.0	1.3e-06	29.0	0.0	1.4	1	0	0	1	1	1	1	GMC	oxidoreductase
HI0933_like	PF03486.14	gi|84488988|ref|YP_447220.1|	-	3.8e-06	25.9	0.3	0.11	11.2	0.0	2.9	3	0	0	3	3	3	2	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|84488988|ref|YP_447220.1|	-	8.2e-06	26.0	0.0	2.4e-05	24.5	0.0	1.8	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4	PF00037.27	gi|84488988|ref|YP_447220.1|	-	1.1e-05	25.0	4.5	2.5e-05	23.9	4.5	1.5	1	0	0	1	1	1	1	4Fe-4S	binding	domain
Lycopene_cycl	PF05834.12	gi|84488988|ref|YP_447220.1|	-	1.1e-05	24.6	0.0	1.9e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.6	gi|84488988|ref|YP_447220.1|	-	2.6e-05	24.2	0.0	0.012	15.6	0.0	2.4	2	0	0	2	2	2	1	FAD-NAD(P)-binding
GIDA	PF01134.22	gi|84488988|ref|YP_447220.1|	-	4.3e-05	22.8	0.1	0.0032	16.6	0.2	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Fer4_10	PF13237.6	gi|84488988|ref|YP_447220.1|	-	0.0015	18.6	0.2	0.003	17.7	0.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84488988|ref|YP_447220.1|	-	0.0022	18.1	0.5	0.0051	16.9	0.2	1.7	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.19	gi|84488988|ref|YP_447220.1|	-	0.0023	17.3	0.0	0.0035	16.6	0.0	1.5	1	0	0	1	1	1	1	FAD	binding	domain
TrkA_N	PF02254.18	gi|84488988|ref|YP_447220.1|	-	0.0023	18.2	0.1	0.011	16.0	0.0	2.1	2	0	0	2	2	2	1	TrkA-N	domain
Fer4_7	PF12838.7	gi|84488988|ref|YP_447220.1|	-	0.0082	16.7	0.2	0.015	15.9	0.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84488988|ref|YP_447220.1|	-	0.0082	16.3	0.2	0.015	15.5	0.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84488988|ref|YP_447220.1|	-	0.0082	16.2	2.9	0.016	15.3	2.9	1.4	1	0	0	1	1	1	1	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84488988|ref|YP_447220.1|	-	0.015	15.4	2.4	0.032	14.3	2.4	1.5	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|84488988|ref|YP_447220.1|	-	0.031	14.5	0.0	0.084	13.1	0.0	1.7	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Fer4_17	PF13534.6	gi|84488988|ref|YP_447220.1|	-	0.047	14.2	0.4	0.08	13.5	0.4	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Pyr_redox	PF00070.27	gi|84488988|ref|YP_447220.1|	-	0.071	13.7	1.9	0.45	11.1	0.0	2.7	3	0	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_4	PF12800.7	gi|84488988|ref|YP_447220.1|	-	0.14	12.7	1.1	0.28	11.8	1.1	1.5	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Trp_halogenase	PF04820.14	gi|84488988|ref|YP_447220.1|	-	0.17	10.7	0.2	0.88	8.3	0.0	1.9	2	0	0	2	2	2	0	Tryptophan	halogenase
zinc_ribbon_6	PF14599.6	gi|84488988|ref|YP_447220.1|	-	0.19	11.8	0.4	14	5.8	0.0	2.3	2	0	0	2	2	2	0	Zinc-ribbon
B12D	PF06522.11	gi|84488988|ref|YP_447220.1|	-	0.2	11.5	0.0	0.45	10.4	0.0	1.6	1	0	0	1	1	1	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
Fer4_13	PF13370.6	gi|84488988|ref|YP_447220.1|	-	0.33	11.5	2.1	0.68	10.5	2.1	1.5	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
ThiI	PF02568.14	gi|84488989|ref|YP_447221.1|	-	3.6e-65	219.3	1.2	7.3e-65	218.2	0.2	1.9	2	1	1	3	3	3	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.17	gi|84488989|ref|YP_447221.1|	-	6.8e-23	81.4	0.7	1.4e-22	80.4	0.7	1.5	1	0	0	1	1	1	1	THUMP	domain
QueC	PF06508.13	gi|84488989|ref|YP_447221.1|	-	0.00012	21.6	0.0	0.004	16.7	0.0	2.3	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|84488989|ref|YP_447221.1|	-	0.00018	20.4	0.0	0.0003	19.7	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
RNase_PH_C	PF03725.15	gi|84488989|ref|YP_447221.1|	-	0.13	12.4	0.0	0.97	9.5	0.0	2.3	3	0	0	3	3	3	0	3'	exoribonuclease	family,	domain	2
DUF4888	PF16229.5	gi|84488989|ref|YP_447221.1|	-	0.21	11.6	1.0	8	6.4	0.0	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4888)
VWA_CoxE	PF05762.14	gi|84488990|ref|YP_447222.1|	-	3e-41	141.2	0.0	1.2e-40	139.3	0.0	1.8	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
DUF498	PF04430.14	gi|84488990|ref|YP_447222.1|	-	0.0062	16.6	0.0	0.13	12.4	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF498/DUF598)
MA3	PF02847.17	gi|84488990|ref|YP_447222.1|	-	0.1	12.6	0.4	7.3	6.6	0.1	2.8	2	0	0	2	2	2	0	MA3	domain
GATase_3	PF07685.14	gi|84488991|ref|YP_447223.1|	-	1.2e-39	136.0	0.1	1.8e-39	135.4	0.1	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|84488991|ref|YP_447223.1|	-	3.2e-17	62.8	0.1	6.1e-17	61.9	0.1	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|84488991|ref|YP_447223.1|	-	1.1e-14	54.7	0.3	6.5e-09	35.9	0.0	2.5	3	0	0	3	3	3	2	AAA	domain
SNO	PF01174.19	gi|84488991|ref|YP_447223.1|	-	4.2e-05	23.5	0.0	7.9e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
AAA_19	PF13245.6	gi|84488991|ref|YP_447223.1|	-	0.044	14.1	0.0	0.095	13.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DJ-1_PfpI	PF01965.24	gi|84488991|ref|YP_447223.1|	-	0.085	12.6	0.0	0.16	11.8	0.0	1.4	1	0	0	1	1	1	0	DJ-1/PfpI	family
MTD	PF01993.18	gi|84488992|ref|YP_447224.1|	-	9.3e-128	425.3	2.3	1e-127	425.1	2.3	1.0	1	0	0	1	1	1	1	methylene-5,6,7,8-tetrahydromethanopterin	dehydrogenase
PEP-utilizers_C	PF02896.18	gi|84488992|ref|YP_447224.1|	-	0.075	12.1	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	PEP-utilising	enzyme,	TIM	barrel	domain
IGPD	PF00475.18	gi|84488993|ref|YP_447225.1|	-	9.4e-60	201.1	0.4	1.4e-59	200.5	0.4	1.2	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
ZT_dimer	PF16916.5	gi|84488993|ref|YP_447225.1|	-	0.11	12.6	1.9	0.54	10.4	0.1	2.3	2	0	0	2	2	2	0	Dimerisation	domain	of	Zinc	Transporter
Polysacc_synt	PF01943.17	gi|84488994|ref|YP_447226.1|	-	5.8e-36	124.3	20.5	5.8e-36	124.3	20.5	2.9	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|84488994|ref|YP_447226.1|	-	5.5e-28	97.8	56.1	4.7e-25	88.3	31.9	3.7	3	1	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|84488994|ref|YP_447226.1|	-	9.7e-22	77.2	33.3	6.6e-19	67.8	28.5	2.4	2	1	0	2	2	2	2	Lipid	II	flippase	MurJ
Polysacc_synt_3	PF13440.6	gi|84488994|ref|YP_447226.1|	-	2.7e-21	76.1	12.0	2.7e-21	76.1	12.0	2.5	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
MatE	PF01554.18	gi|84488994|ref|YP_447226.1|	-	4.1e-17	62.3	27.7	1.6e-14	53.9	15.2	4.4	3	2	1	5	5	5	2	MatE
Tim17	PF02466.19	gi|84488994|ref|YP_447226.1|	-	0.5	10.7	3.9	5.1	7.5	0.1	3.5	4	0	0	4	4	4	0	Tim17/Tim22/Tim23/Pmp24	family
O_anti_polymase	PF01901.16	gi|84488995|ref|YP_447227.1|	-	7.6e-108	360.7	48.1	9.4e-108	360.4	48.1	1.1	1	0	0	1	1	1	1	Putative	O-antigen	polymerase
ENOD93	PF03386.14	gi|84488995|ref|YP_447227.1|	-	0.17	11.8	1.2	0.54	10.2	0.3	2.3	1	1	1	2	2	2	0	Early	nodulin	93	ENOD93	protein
Epimerase_2	PF02350.19	gi|84488996|ref|YP_447228.1|	-	1.6e-07	30.6	0.0	5.5e-07	28.8	0.0	1.8	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
DUF354	PF04007.12	gi|84488996|ref|YP_447228.1|	-	0.00078	18.6	1.9	0.0026	16.9	1.8	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF354)
CBFD_NFYB_HMF	PF00808.23	gi|84488997|ref|YP_447229.1|	-	4.5e-18	65.3	0.3	5.2e-18	65.1	0.3	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|84488997|ref|YP_447229.1|	-	3.6e-08	33.8	0.0	4e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-T_C	PF15511.6	gi|84488997|ref|YP_447229.1|	-	1e-06	28.8	0.0	1.1e-06	28.7	0.0	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TAF	PF02969.17	gi|84488997|ref|YP_447229.1|	-	8e-06	25.9	0.1	9.2e-06	25.7	0.1	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-S	PF15630.6	gi|84488997|ref|YP_447229.1|	-	1.4e-05	25.4	0.0	1.6e-05	25.2	0.0	1.1	1	0	0	1	1	1	1	CENP-S	protein
Bromo_TP	PF07524.13	gi|84488997|ref|YP_447229.1|	-	0.0048	16.9	0.0	0.0058	16.6	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
TFIID_20kDa	PF03847.13	gi|84488997|ref|YP_447229.1|	-	0.023	15.2	0.2	0.028	14.9	0.2	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	TFIID	subunit	A
TFIID-31kDa	PF02291.15	gi|84488997|ref|YP_447229.1|	-	0.038	14.1	0.0	0.04	14.0	0.0	1.0	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	31kD	subunit
RelB	PF04221.12	gi|84488997|ref|YP_447229.1|	-	0.059	13.3	0.0	0.087	12.8	0.0	1.3	1	0	0	1	1	1	0	RelB	antitoxin
ApbA_C	PF08546.11	gi|84488997|ref|YP_447229.1|	-	0.11	12.7	0.0	0.13	12.4	0.0	1.2	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
ArsA_ATPase	PF02374.15	gi|84488998|ref|YP_447230.1|	-	2.3e-111	371.8	0.3	2.7e-111	371.6	0.3	1.0	1	0	0	1	1	1	1	Anion-transporting	ATPase
AAA_31	PF13614.6	gi|84488998|ref|YP_447230.1|	-	9.7e-12	45.1	0.5	3.4e-11	43.4	0.0	2.1	2	2	0	2	2	2	1	AAA	domain
CbiA	PF01656.23	gi|84488998|ref|YP_447230.1|	-	2.5e-10	40.5	0.6	2.4e-09	37.3	0.6	2.5	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|84488998|ref|YP_447230.1|	-	1.5e-09	37.7	1.3	9.9e-05	21.9	0.6	2.6	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
SRP54	PF00448.22	gi|84488998|ref|YP_447230.1|	-	7.7e-06	25.7	3.0	0.021	14.5	0.4	3.1	3	0	0	3	3	3	2	SRP54-type	protein,	GTPase	domain
CBP_BcsQ	PF06564.12	gi|84488998|ref|YP_447230.1|	-	1e-05	25.2	0.0	0.0052	16.3	0.0	2.2	1	1	1	2	2	2	2	Cellulose	biosynthesis	protein	BcsQ
Fer4_NifH	PF00142.18	gi|84488998|ref|YP_447230.1|	-	0.00011	21.8	0.0	0.00027	20.5	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_24	PF13479.6	gi|84488998|ref|YP_447230.1|	-	0.00093	19.0	0.4	0.0025	17.6	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
PhoH	PF02562.16	gi|84488998|ref|YP_447230.1|	-	0.0078	15.7	0.0	0.016	14.7	0.0	1.6	1	0	0	1	1	1	1	PhoH-like	protein
FliJ	PF02050.16	gi|84488998|ref|YP_447230.1|	-	0.0081	16.4	0.1	0.23	11.7	0.0	2.4	2	0	0	2	2	2	1	Flagellar	FliJ	protein
DUF4355	PF14265.6	gi|84488998|ref|YP_447230.1|	-	0.043	14.1	2.1	0.071	13.4	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
PIF1	PF05970.14	gi|84488998|ref|YP_447230.1|	-	0.048	12.8	2.9	3.4	6.7	0.3	2.2	2	0	0	2	2	2	0	PIF1-like	helicase
Zeta_toxin	PF06414.12	gi|84488998|ref|YP_447230.1|	-	0.083	12.2	0.2	0.21	10.9	0.2	1.8	1	1	0	1	1	1	0	Zeta	toxin
AAA_26	PF13500.6	gi|84488998|ref|YP_447230.1|	-	0.091	12.6	0.6	1.5	8.6	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
MeaB	PF03308.16	gi|84488998|ref|YP_447230.1|	-	0.1	11.6	0.7	0.63	9.0	0.1	2.4	3	1	0	3	3	3	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
NB-ARC	PF00931.22	gi|84488998|ref|YP_447230.1|	-	0.1	11.8	1.2	0.17	11.0	1.2	1.6	1	1	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.6	gi|84488998|ref|YP_447230.1|	-	0.13	11.9	2.4	0.62	9.6	1.3	2.4	2	1	0	2	2	2	0	AAA	domain
NAD_synthase	PF02540.17	gi|84488999|ref|YP_447231.1|	-	5.6e-85	284.3	0.0	6.7e-85	284.0	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|84488999|ref|YP_447231.1|	-	9.6e-06	24.6	0.1	0.0039	16.0	0.1	2.4	2	1	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|84488999|ref|YP_447231.1|	-	0.0025	17.5	0.1	0.0035	17.1	0.1	1.2	1	0	0	1	1	1	1	Asparagine	synthase
Phage_terminase	PF10668.9	gi|84488999|ref|YP_447231.1|	-	0.005	16.8	0.1	1.3	9.0	0.0	2.8	3	0	0	3	3	3	1	Phage	terminase	small	subunit
Sigma70_r4_2	PF08281.12	gi|84488999|ref|YP_447231.1|	-	0.0057	16.3	0.0	0.051	13.3	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
UPF0122	PF04297.14	gi|84488999|ref|YP_447231.1|	-	0.012	15.9	0.2	0.1	12.9	0.1	2.2	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
Sigma70_r4	PF04545.16	gi|84488999|ref|YP_447231.1|	-	0.013	15.0	0.0	0.14	11.7	0.0	2.3	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_23	PF13384.6	gi|84488999|ref|YP_447231.1|	-	0.045	13.6	0.0	0.64	9.9	0.0	2.4	2	0	0	2	2	2	0	Homeodomain-like	domain
MarR_2	PF12802.7	gi|84488999|ref|YP_447231.1|	-	0.064	13.2	0.0	0.23	11.4	0.0	1.9	2	0	0	2	2	2	0	MarR	family
Mga	PF05043.13	gi|84488999|ref|YP_447231.1|	-	0.074	13.6	0.0	0.21	12.2	0.0	1.7	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
CENP-B_N	PF04218.13	gi|84488999|ref|YP_447231.1|	-	0.086	12.5	0.0	0.51	10.0	0.0	2.1	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
Sigma70_r3	PF04539.16	gi|84488999|ref|YP_447231.1|	-	0.11	12.6	0.3	0.29	11.2	0.3	1.7	1	0	0	1	1	1	0	Sigma-70	region	3
tRNA-synt_1	PF00133.22	gi|84489000|ref|YP_447232.1|	-	2.4e-68	230.9	10.1	1.8e-65	221.4	10.1	2.9	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|84489000|ref|YP_447232.1|	-	2.1e-22	79.5	14.8	1e-09	37.6	0.1	4.6	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|84489000|ref|YP_447232.1|	-	5.6e-22	78.3	2.7	5.6e-22	78.3	2.7	2.6	3	0	0	3	3	3	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.6	gi|84489000|ref|YP_447232.1|	-	2.8e-12	46.5	1.9	3.9e-11	42.8	0.1	2.6	1	1	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|84489000|ref|YP_447232.1|	-	1.1e-08	34.8	0.7	0.00031	20.2	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|84489000|ref|YP_447232.1|	-	0.0014	17.6	4.7	0.012	14.5	0.0	3.0	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1b	PF00579.25	gi|84489000|ref|YP_447232.1|	-	0.024	14.0	0.5	0.11	11.7	0.0	2.4	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(W	and	Y)
Presenilin	PF01080.17	gi|84489001|ref|YP_447233.1|	-	0.022	13.5	0.6	0.025	13.4	0.6	1.1	1	0	0	1	1	1	0	Presenilin
OATP	PF03137.20	gi|84489001|ref|YP_447233.1|	-	0.045	12.0	1.5	0.047	12.0	1.5	1.0	1	0	0	1	1	1	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
TrbL	PF04610.14	gi|84489001|ref|YP_447233.1|	-	0.14	11.9	1.0	0.16	11.7	1.0	1.1	1	0	0	1	1	1	0	TrbL/VirB6	plasmid	conjugal	transfer	protein
DUF4834	PF16118.5	gi|84489001|ref|YP_447233.1|	-	0.28	12.2	4.8	0.2	12.6	3.5	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4834)
Menin	PF05053.13	gi|84489001|ref|YP_447233.1|	-	0.42	8.9	4.6	0.45	8.8	4.6	1.1	1	0	0	1	1	1	0	Menin
Mtc	PF03820.17	gi|84489001|ref|YP_447233.1|	-	1.2	8.1	6.5	1.5	7.8	6.5	1.1	1	0	0	1	1	1	0	Tricarboxylate	carrier
HOK_GEF	PF01848.16	gi|84489001|ref|YP_447233.1|	-	2.1	7.9	6.6	3.3	7.2	6.6	1.3	1	0	0	1	1	1	0	Hok/gef	family
GATase_3	PF07685.14	gi|84489002|ref|YP_447234.1|	-	2.1e-14	53.6	0.1	3.4e-14	52.9	0.1	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.6	gi|84489002|ref|YP_447234.1|	-	1.7e-12	47.6	4.1	2.9e-10	40.3	4.1	2.4	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|84489002|ref|YP_447234.1|	-	1.3e-07	31.8	0.9	4.9e-07	29.9	0.1	2.2	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
GATase_5	PF13507.6	gi|84489002|ref|YP_447234.1|	-	4.5e-05	22.7	0.0	9.5e-05	21.6	0.0	1.6	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Zeta_toxin	PF06414.12	gi|84489002|ref|YP_447234.1|	-	0.00037	19.9	0.0	0.00063	19.1	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
DUF1611	PF07755.11	gi|84489002|ref|YP_447234.1|	-	0.00086	18.6	0.1	0.045	13.0	0.0	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
MobB	PF03205.14	gi|84489002|ref|YP_447234.1|	-	0.0011	18.9	0.1	0.33	10.9	0.1	2.5	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DJ-1_PfpI	PF01965.24	gi|84489002|ref|YP_447234.1|	-	0.0037	17.1	0.0	0.16	11.7	0.0	2.3	2	0	0	2	2	2	1	DJ-1/PfpI	family
GATase	PF00117.28	gi|84489002|ref|YP_447234.1|	-	0.0047	16.7	0.2	0.011	15.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|84489002|ref|YP_447234.1|	-	0.0052	16.7	0.1	0.012	15.4	0.1	1.7	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
PMBR	PF09373.10	gi|84489002|ref|YP_447234.1|	-	0.013	15.6	4.0	0.69	10.2	0.1	3.4	4	0	0	4	4	4	0	Pseudomurein-binding	repeat
Aldo_ket_red	PF00248.21	gi|84489002|ref|YP_447234.1|	-	0.069	12.3	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	Aldo/keto	reductase	family
Response_reg	PF00072.24	gi|84489002|ref|YP_447234.1|	-	0.21	11.8	0.8	1	9.6	0.0	2.6	4	0	0	4	4	3	0	Response	regulator	receiver	domain
DHBP_synthase	PF00926.19	gi|84489003|ref|YP_447235.1|	-	3.9e-64	215.7	0.0	4.6e-64	215.5	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DUF1847	PF08901.11	gi|84489003|ref|YP_447235.1|	-	0.035	13.7	0.0	0.88	9.2	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1847)
CheF-arch	PF04283.12	gi|84489004|ref|YP_447236.1|	-	0.00096	19.0	0.6	0.00096	19.0	0.6	1.5	1	1	1	2	2	2	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
Sigma_1s	PF02454.16	gi|84489004|ref|YP_447236.1|	-	0.14	12.2	2.3	0.38	10.7	0.1	2.2	2	1	0	2	2	2	0	Sigma	1s	protein
CTP-dep_RFKase	PF01982.16	gi|84489005|ref|YP_447237.1|	-	3.1e-30	104.8	0.1	3.5e-30	104.6	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HisG	PF01634.18	gi|84489006|ref|YP_447238.1|	-	4.7e-53	179.4	0.4	6.2e-53	179.0	0.4	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.11	gi|84489006|ref|YP_447238.1|	-	9.3e-27	93.0	0.8	2.9e-26	91.4	0.1	2.2	3	0	0	3	3	3	1	HisG,	C-terminal	domain
SBP_bac_3	PF00497.20	gi|84489006|ref|YP_447238.1|	-	0.00045	19.7	0.1	0.00074	19.0	0.1	1.4	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
FAA_hydrolase	PF01557.18	gi|84489007|ref|YP_447239.1|	-	9.3e-54	182.4	0.0	1.2e-53	182.1	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
DUF2437	PF10370.9	gi|84489007|ref|YP_447239.1|	-	0.031	15.2	0.0	0.42	11.5	0.0	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2437)
DUF1287	PF06940.11	gi|84489007|ref|YP_447239.1|	-	0.033	13.9	0.8	1.1	8.9	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1287)
FAD_binding_2	PF00890.24	gi|84489008|ref|YP_447240.1|	-	1.7e-92	310.7	1.1	2.1e-92	310.4	1.1	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|84489008|ref|YP_447240.1|	-	3.5e-29	101.4	1.2	4.3e-29	101.1	0.3	1.6	2	0	0	2	2	2	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|84489008|ref|YP_447240.1|	-	1.1e-06	28.2	1.1	0.0014	18.0	0.2	2.5	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|84489008|ref|YP_447240.1|	-	0.0026	17.2	2.5	0.016	14.5	0.7	2.4	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|84489008|ref|YP_447240.1|	-	0.0053	16.0	3.1	1	8.5	0.8	2.6	2	0	0	2	2	2	2	Thi4	family
DAO	PF01266.24	gi|84489008|ref|YP_447240.1|	-	0.0068	16.0	0.1	0.015	14.9	0.1	1.7	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|84489008|ref|YP_447240.1|	-	0.013	14.2	0.4	0.013	14.2	0.4	3.1	4	0	0	4	4	4	0	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|84489008|ref|YP_447240.1|	-	0.033	13.4	0.4	0.072	12.3	0.4	1.6	1	0	0	1	1	1	0	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|84489008|ref|YP_447240.1|	-	0.11	11.7	2.4	0.51	9.5	1.6	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|84489008|ref|YP_447240.1|	-	0.13	12.9	0.5	0.4	11.3	0.5	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Wbp11	PF09429.10	gi|84489008|ref|YP_447240.1|	-	0.29	11.5	0.9	1	9.8	0.1	2.1	1	1	1	2	2	2	0	WW	domain	binding	protein	11
GIDA	PF01134.22	gi|84489008|ref|YP_447240.1|	-	0.37	9.8	5.8	0.087	11.9	1.3	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Amidase	PF01425.21	gi|84489009|ref|YP_447241.1|	-	4.2e-123	411.6	0.0	4.8e-123	411.5	0.0	1.0	1	0	0	1	1	1	1	Amidase
URO-D	PF01208.17	gi|84489010|ref|YP_447242.1|	-	1.9e-81	273.9	0.5	2.3e-81	273.7	0.5	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Trp_syntA	PF00290.20	gi|84489010|ref|YP_447242.1|	-	0.018	13.9	0.1	0.041	12.7	0.1	1.5	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
DUF1611_N	PF17396.2	gi|84489010|ref|YP_447242.1|	-	0.057	13.7	0.2	0.38	11.0	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
CHDCT2	PF08074.11	gi|84489011|ref|YP_447243.1|	-	0.098	12.8	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	CHDCT2	(NUC038)	domain
MtaB	PF12176.8	gi|84489012|ref|YP_447244.1|	-	1e-207	690.5	7.5	1.1e-207	690.3	7.5	1.0	1	0	0	1	1	1	1	Methanol-cobalamin	methyltransferase	B	subunit
B12-binding_2	PF02607.17	gi|84489013|ref|YP_447245.1|	-	3.1e-17	62.8	0.1	7.2e-17	61.6	0.1	1.6	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|84489013|ref|YP_447245.1|	-	4.6e-14	52.5	0.0	8.3e-14	51.7	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
MtaB	PF12176.8	gi|84489014|ref|YP_447246.1|	-	4.8e-208	691.6	3.5	5.5e-208	691.4	3.5	1.0	1	0	0	1	1	1	1	Methanol-cobalamin	methyltransferase	B	subunit
B12-binding_2	PF02607.17	gi|84489015|ref|YP_447247.1|	-	5.1e-17	62.1	0.0	1.2e-16	60.9	0.0	1.7	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|84489015|ref|YP_447247.1|	-	2.2e-12	47.0	0.1	3.8e-12	46.3	0.1	1.3	1	0	0	1	1	1	1	B12	binding	domain
MtaB	PF12176.8	gi|84489016|ref|YP_447248.1|	-	1.3e-205	683.5	5.0	1.5e-205	683.4	5.0	1.0	1	0	0	1	1	1	1	Methanol-cobalamin	methyltransferase	B	subunit
B12-binding_2	PF02607.17	gi|84489017|ref|YP_447249.1|	-	3.2e-17	62.7	0.1	7.2e-17	61.6	0.1	1.6	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|84489017|ref|YP_447249.1|	-	4.9e-14	52.4	0.1	9.6e-14	51.5	0.1	1.5	1	1	0	1	1	1	1	B12	binding	domain
RACo_C_ter	PF14574.6	gi|84489018|ref|YP_447250.1|	-	4.5e-64	216.0	1.6	1.5e-63	214.3	1.6	1.9	1	1	0	1	1	1	1	C-terminal	domain	of	RACo	the	ASKHA	domain
Raco_middle	PF17651.1	gi|84489018|ref|YP_447250.1|	-	1.9e-17	63.5	0.6	1.4e-16	60.6	0.2	2.5	3	0	0	3	3	3	1	RACo	middle	region
Fer4_7	PF12838.7	gi|84489018|ref|YP_447250.1|	-	5.7e-05	23.6	8.7	0.00017	22.1	8.7	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489018|ref|YP_447250.1|	-	0.00025	21.0	12.3	0.014	15.4	1.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|84489018|ref|YP_447250.1|	-	0.00063	19.4	10.4	0.013	15.3	3.6	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489018|ref|YP_447250.1|	-	0.00067	19.8	9.7	0.0022	18.1	9.9	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489018|ref|YP_447250.1|	-	0.0018	18.4	9.8	0.006	16.7	9.8	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489018|ref|YP_447250.1|	-	0.0023	18.8	8.5	0.069	14.1	3.6	2.6	1	1	1	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|84489018|ref|YP_447250.1|	-	0.0054	17.3	5.8	0.016	15.8	0.3	2.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489018|ref|YP_447250.1|	-	0.028	14.5	11.7	0.24	11.6	12.4	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489018|ref|YP_447250.1|	-	0.092	13.2	12.3	0.09	13.2	2.9	2.6	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
FGGY_N	PF00370.21	gi|84489018|ref|YP_447250.1|	-	0.13	11.8	0.1	0.29	10.6	0.1	1.6	1	0	0	1	1	1	0	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
ADSL_C	PF10397.9	gi|84489018|ref|YP_447250.1|	-	0.17	12.4	0.0	0.35	11.4	0.0	1.5	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminus
Fer4_15	PF13459.6	gi|84489018|ref|YP_447250.1|	-	0.43	11.3	4.5	1.2	9.9	4.5	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_2	PF12797.7	gi|84489018|ref|YP_447250.1|	-	0.58	10.4	13.6	1.5	9.0	3.8	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489018|ref|YP_447250.1|	-	0.66	10.6	10.1	1.6	9.4	2.0	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84489018|ref|YP_447250.1|	-	0.83	10.2	7.7	0.24	12.0	2.1	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Hydrolase	PF00702.26	gi|84489019|ref|YP_447251.1|	-	1.2e-09	38.8	0.0	1.8e-09	38.2	0.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
TrmB	PF01978.19	gi|84489019|ref|YP_447251.1|	-	0.0052	16.7	0.1	0.013	15.3	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|84489019|ref|YP_447251.1|	-	0.079	12.8	0.0	1.7	8.5	0.0	2.7	3	0	0	3	3	3	0	IclR	helix-turn-helix	domain
AAA_5	PF07728.14	gi|84489020|ref|YP_447252.1|	-	7.2e-17	61.7	0.0	2.2e-16	60.1	0.0	1.8	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|84489020|ref|YP_447252.1|	-	9.2e-14	51.4	0.0	9.6e-12	44.9	0.0	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|84489020|ref|YP_447252.1|	-	5.8e-13	49.4	0.1	3.6e-12	46.9	0.1	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|84489020|ref|YP_447252.1|	-	4.9e-08	33.5	0.1	3.5e-07	30.7	0.1	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_2	PF07724.14	gi|84489020|ref|YP_447252.1|	-	1.1e-07	32.2	0.3	2.2e-07	31.1	0.1	1.7	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.6	gi|84489020|ref|YP_447252.1|	-	1.9e-06	28.2	0.0	7.1e-06	26.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.26	gi|84489020|ref|YP_447252.1|	-	1.5e-05	24.7	0.0	0.062	13.0	0.0	2.2	2	0	0	2	2	2	2	Sigma-54	interaction	domain
RuvB_N	PF05496.12	gi|84489020|ref|YP_447252.1|	-	2.3e-05	24.2	0.1	0.018	14.8	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_18	PF13238.6	gi|84489020|ref|YP_447252.1|	-	3.6e-05	24.3	0.2	0.00016	22.2	0.0	2.2	1	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|84489020|ref|YP_447252.1|	-	6.1e-05	23.1	0.9	0.0012	18.9	0.2	2.8	1	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|84489020|ref|YP_447252.1|	-	7e-05	23.2	0.0	0.05	13.9	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_6	PF12774.7	gi|84489020|ref|YP_447252.1|	-	0.00014	20.9	0.0	0.00025	20.1	0.0	1.3	1	0	0	1	1	1	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
Sigma54_activ_2	PF14532.6	gi|84489020|ref|YP_447252.1|	-	0.00026	21.1	0.2	0.017	15.2	0.2	2.4	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|84489020|ref|YP_447252.1|	-	0.00027	20.4	0.0	0.003	17.0	0.0	2.1	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
MCM	PF00493.23	gi|84489020|ref|YP_447252.1|	-	0.00034	19.8	0.0	0.04	13.0	0.1	2.5	2	0	0	2	2	2	1	MCM	P-loop	domain
TIP49	PF06068.13	gi|84489020|ref|YP_447252.1|	-	0.00087	18.6	0.0	0.046	12.9	0.0	2.3	2	0	0	2	2	2	1	TIP49	P-loop	domain
AAA_11	PF13086.6	gi|84489020|ref|YP_447252.1|	-	0.0016	18.3	0.3	0.0038	17.1	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.22	gi|84489020|ref|YP_447252.1|	-	0.0034	17.8	0.0	0.015	15.7	0.0	2.2	1	1	0	1	1	1	1	RNA	helicase
AAA_7	PF12775.7	gi|84489020|ref|YP_447252.1|	-	0.0051	16.3	0.0	0.0092	15.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
NACHT	PF05729.12	gi|84489020|ref|YP_447252.1|	-	0.0062	16.5	0.5	0.044	13.7	0.5	2.2	1	1	0	1	1	1	1	NACHT	domain
DUF2075	PF09848.9	gi|84489020|ref|YP_447252.1|	-	0.0066	15.7	0.0	0.009	15.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.15	gi|84489020|ref|YP_447252.1|	-	0.0083	16.1	0.1	0.13	12.1	0.1	2.5	1	1	0	1	1	1	1	NTPase
IstB_IS21	PF01695.17	gi|84489020|ref|YP_447252.1|	-	0.0083	15.9	0.0	0.032	14.0	0.0	2.0	2	1	1	3	3	3	1	IstB-like	ATP	binding	protein
NB-ARC	PF00931.22	gi|84489020|ref|YP_447252.1|	-	0.0087	15.3	0.0	0.032	13.4	0.0	2.1	1	1	0	1	1	1	1	NB-ARC	domain
Parvo_NS1	PF01057.17	gi|84489020|ref|YP_447252.1|	-	0.0089	15.1	0.0	0.036	13.2	0.0	2.0	3	0	0	3	3	3	1	Parvovirus	non-structural	protein	NS1
AAA_30	PF13604.6	gi|84489020|ref|YP_447252.1|	-	0.01	15.6	0.0	0.049	13.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|84489020|ref|YP_447252.1|	-	0.011	15.5	0.1	0.028	14.1	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|84489020|ref|YP_447252.1|	-	0.026	15.0	0.0	0.069	13.7	0.0	2.1	1	1	0	1	1	1	0	ABC	transporter
TsaE	PF02367.17	gi|84489020|ref|YP_447252.1|	-	0.03	14.3	0.0	0.065	13.2	0.0	1.7	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATPase_2	PF01637.18	gi|84489020|ref|YP_447252.1|	-	0.048	13.6	1.9	0.25	11.2	0.6	2.6	1	1	1	2	2	2	0	ATPase	domain	predominantly	from	Archaea
Cytidylate_kin	PF02224.18	gi|84489020|ref|YP_447252.1|	-	0.06	13.1	0.0	0.13	12.0	0.0	1.7	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_33	PF13671.6	gi|84489020|ref|YP_447252.1|	-	0.071	13.3	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|84489020|ref|YP_447252.1|	-	0.073	13.3	0.0	0.14	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATPase	PF06745.13	gi|84489020|ref|YP_447252.1|	-	0.18	11.1	0.8	1.2	8.4	0.0	2.5	3	0	0	3	3	3	0	KaiC
DUF362	PF04015.12	gi|84489021|ref|YP_447253.1|	-	1.9e-43	149.1	2.5	2.7e-43	148.6	2.5	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF362)
Fer4	PF00037.27	gi|84489021|ref|YP_447253.1|	-	1.4e-11	43.6	17.4	4.4e-07	29.4	5.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489021|ref|YP_447253.1|	-	4.8e-10	40.2	9.6	6.7e-05	23.8	0.9	2.6	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|84489021|ref|YP_447253.1|	-	1.2e-09	38.6	22.1	6.9e-07	29.8	12.9	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489021|ref|YP_447253.1|	-	2.1e-09	37.4	26.1	6.7e-07	29.4	15.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489021|ref|YP_447253.1|	-	3.8e-09	36.5	22.6	3.7e-06	27.0	13.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489021|ref|YP_447253.1|	-	1.2e-08	34.6	16.2	1.1e-05	25.3	4.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489021|ref|YP_447253.1|	-	5.2e-08	32.9	10.5	1.1e-07	31.9	10.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489021|ref|YP_447253.1|	-	3.2e-07	30.0	12.7	0.00016	21.6	2.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Lar_N	PF09861.9	gi|84489021|ref|YP_447253.1|	-	4.8e-07	29.2	0.6	9e-07	28.3	0.6	1.4	1	0	0	1	1	1	1	Lactate	racemase	N-terminal	domain
Fer4_4	PF12800.7	gi|84489021|ref|YP_447253.1|	-	0.00022	21.5	11.5	0.067	13.7	1.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|84489021|ref|YP_447253.1|	-	0.00067	19.8	7.2	0.0015	18.7	7.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489021|ref|YP_447253.1|	-	0.009	16.5	11.4	0.16	12.5	1.5	2.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489021|ref|YP_447253.1|	-	0.023	15.5	7.7	0.51	11.2	0.9	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489021|ref|YP_447253.1|	-	0.03	15.2	17.6	0.24	12.4	4.7	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489021|ref|YP_447253.1|	-	0.074	13.5	10.5	0.49	10.9	0.9	2.5	1	1	3	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84489021|ref|YP_447253.1|	-	0.18	12.4	14.3	0.78	10.3	2.5	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|84489021|ref|YP_447253.1|	-	0.21	12.3	5.6	1	10.2	0.1	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
OTT_1508_deam	PF14441.6	gi|84489021|ref|YP_447253.1|	-	1	9.4	4.4	3.3	7.8	4.4	1.9	1	1	0	1	1	1	0	OTT_1508-like	deaminase
PadR	PF03551.14	gi|84489022|ref|YP_447254.1|	-	4.6e-14	52.1	0.1	6.2e-14	51.7	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RTP	PF02334.16	gi|84489022|ref|YP_447254.1|	-	4.1e-06	27.4	0.2	5.2e-06	27.1	0.2	1.2	1	0	0	1	1	1	1	Replication	terminator	protein
HTH_45	PF14947.6	gi|84489022|ref|YP_447254.1|	-	0.00013	21.9	0.2	0.00024	21.0	0.2	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.6	gi|84489022|ref|YP_447254.1|	-	0.00079	19.6	0.2	0.0013	18.8	0.2	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.9	gi|84489022|ref|YP_447254.1|	-	0.0047	17.2	0.1	0.0062	16.8	0.1	1.2	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
TrmB	PF01978.19	gi|84489022|ref|YP_447254.1|	-	0.0078	16.1	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|84489022|ref|YP_447254.1|	-	0.013	15.4	0.0	0.027	14.4	0.0	1.6	1	0	0	1	1	1	0	MarR	family
DUF3116	PF11313.8	gi|84489022|ref|YP_447254.1|	-	0.021	14.7	0.1	0.03	14.2	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
DUF4364	PF14277.6	gi|84489022|ref|YP_447254.1|	-	0.026	14.3	0.0	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF815	PF05673.13	gi|84489022|ref|YP_447254.1|	-	0.031	13.4	0.1	0.037	13.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
HTH_27	PF13463.6	gi|84489022|ref|YP_447254.1|	-	0.039	14.4	0.0	0.057	13.9	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF1495	PF07381.11	gi|84489022|ref|YP_447254.1|	-	0.079	12.8	0.1	0.12	12.2	0.1	1.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HxlR	PF01638.17	gi|84489022|ref|YP_447254.1|	-	0.11	12.4	0.0	0.14	12.0	0.0	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
SMC_ScpB	PF04079.16	gi|84489022|ref|YP_447254.1|	-	0.13	11.9	0.0	0.16	11.6	0.0	1.2	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
HTH_IclR	PF09339.10	gi|84489022|ref|YP_447254.1|	-	0.13	12.0	0.0	0.3	10.9	0.0	1.6	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
ABC_tran	PF00005.27	gi|84489023|ref|YP_447255.1|	-	7.6e-30	104.2	0.3	2.3e-29	102.6	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|84489023|ref|YP_447255.1|	-	1e-13	51.8	0.1	1.4e-08	34.9	0.0	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|84489023|ref|YP_447255.1|	-	5e-08	33.1	4.9	0.0076	16.0	0.1	3.1	1	1	2	3	3	3	2	AAA	ATPase	domain
DUF4162	PF13732.6	gi|84489023|ref|YP_447255.1|	-	8.3e-08	32.8	2.8	9.9e-08	32.6	0.3	2.4	2	1	1	3	3	3	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.6	gi|84489023|ref|YP_447255.1|	-	1.6e-05	25.5	1.2	3.3e-05	24.5	1.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|84489023|ref|YP_447255.1|	-	0.0085	16.4	0.1	0.16	12.3	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_13	PF13166.6	gi|84489023|ref|YP_447255.1|	-	0.013	14.2	2.0	0.31	9.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
DUF1090	PF06476.12	gi|84489023|ref|YP_447255.1|	-	0.026	14.6	1.5	0.049	13.7	1.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1090)
SMC_N	PF02463.19	gi|84489023|ref|YP_447255.1|	-	0.035	13.5	3.8	0.45	9.9	1.2	2.8	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.6	gi|84489023|ref|YP_447255.1|	-	0.038	13.7	0.0	0.089	12.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|84489023|ref|YP_447255.1|	-	0.038	13.6	1.4	0.097	12.3	1.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_24	PF13479.6	gi|84489023|ref|YP_447255.1|	-	0.065	13.0	0.6	0.18	11.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|84489023|ref|YP_447255.1|	-	0.33	10.7	3.5	1.8	8.3	0.1	2.6	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA	PF00004.29	gi|84489023|ref|YP_447255.1|	-	1.7	9.1	5.8	3.7	8.0	1.3	3.1	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC2_membrane_3	PF12698.7	gi|84489024|ref|YP_447256.1|	-	8.2e-50	169.8	21.2	9.2e-50	169.7	21.2	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|84489024|ref|YP_447256.1|	-	2.2e-36	125.3	26.2	2.1e-34	118.8	16.5	2.9	3	0	0	3	3	3	2	ABC-2	type	transporter
ABC2_membrane_2	PF12679.7	gi|84489024|ref|YP_447256.1|	-	5.5e-21	75.1	12.8	7.4e-21	74.7	12.8	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.13	gi|84489024|ref|YP_447256.1|	-	3.9e-06	26.5	11.3	0.00016	21.3	8.7	2.3	2	1	0	2	2	2	2	CcmB	protein
PTS_IIA	PF02255.16	gi|84489024|ref|YP_447256.1|	-	0.018	15.1	0.0	0.039	14.0	0.0	1.5	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
ABC2_membrane_5	PF13346.6	gi|84489024|ref|YP_447256.1|	-	5.5	6.5	29.1	24	4.4	0.2	2.8	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
PQQ_3	PF13570.6	gi|84489025|ref|YP_447257.1|	-	1.7e-72	238.3	22.7	1.4e-10	41.3	0.1	8.1	8	0	0	8	8	8	8	PQQ-like	domain
PQQ	PF01011.21	gi|84489025|ref|YP_447257.1|	-	1.3e-54	179.7	30.8	2.6e-12	46.0	0.3	8.7	9	0	0	9	9	9	7	PQQ	enzyme	repeat
PQQ_2	PF13360.6	gi|84489025|ref|YP_447257.1|	-	3e-53	180.8	11.0	2.3e-28	99.4	1.3	3.0	1	1	2	3	3	3	3	PQQ-like	domain
WD40_like	PF17005.5	gi|84489025|ref|YP_447257.1|	-	3.2e-07	30.0	6.1	0.018	14.4	0.3	4.6	1	1	6	7	7	7	5	WD40-like	domain
Rep_trans	PF02486.19	gi|84489025|ref|YP_447257.1|	-	0.00024	20.9	2.3	3	7.5	0.0	4.4	2	2	2	4	4	4	2	Replication	initiation	factor
Tube	PF17212.3	gi|84489025|ref|YP_447257.1|	-	0.0088	16.1	0.4	16	5.5	0.0	4.3	1	1	5	6	6	6	1	Tail	tubular	protein
PsbP	PF01789.16	gi|84489025|ref|YP_447257.1|	-	0.045	13.9	0.2	7.7	6.6	0.0	3.2	2	2	1	3	3	3	0	PsbP
BBS1	PF14779.6	gi|84489025|ref|YP_447257.1|	-	0.12	11.7	0.0	34	3.7	0.0	3.8	3	2	0	4	4	4	0	Ciliary	BBSome	complex	subunit	1
Alba	PF01918.21	gi|84489026|ref|YP_447258.1|	-	1.3e-20	72.9	1.4	1.8e-20	72.5	1.4	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.8	gi|84489026|ref|YP_447258.1|	-	0.00098	19.1	0.2	0.001	19.0	0.2	1.3	1	0	0	1	1	1	1	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
HMGL-like	PF00682.19	gi|84489027|ref|YP_447259.1|	-	5.2e-87	291.7	0.9	7.6e-87	291.2	0.9	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|84489027|ref|YP_447259.1|	-	5.2e-33	113.8	0.7	1.5e-32	112.3	0.5	1.9	2	0	0	2	2	2	1	LeuA	allosteric	(dimerisation)	domain
AP_endonuc_2	PF01261.24	gi|84489027|ref|YP_447259.1|	-	0.042	13.3	0.2	0.41	10.1	0.0	2.6	3	1	1	4	4	4	0	Xylose	isomerase-like	TIM	barrel
Replicase	PF03090.17	gi|84489027|ref|YP_447259.1|	-	0.082	12.8	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Replicase	family
Amidohydro_1	PF01979.20	gi|84489028|ref|YP_447260.1|	-	1.3e-81	274.6	1.5	1.7e-81	274.2	1.5	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|84489028|ref|YP_447260.1|	-	5.3e-18	65.7	0.0	4.2e-13	49.6	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|84489028|ref|YP_447260.1|	-	0.00055	19.4	0.1	0.001	18.5	0.1	1.4	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
DUF4612	PF15389.6	gi|84489028|ref|YP_447260.1|	-	0.57	11.2	3.7	0.24	12.5	0.6	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4612)
Phage_integrase	PF00589.22	gi|84489029|ref|YP_447261.1|	-	6.6e-08	32.5	0.3	1e-07	31.9	0.3	1.3	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|84489029|ref|YP_447261.1|	-	1.1e-05	25.8	1.8	1.1e-05	25.8	1.8	2.4	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.17	gi|84489029|ref|YP_447261.1|	-	0.0043	17.3	0.0	0.012	15.9	0.0	1.7	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|84489029|ref|YP_447261.1|	-	0.0048	17.2	6.0	0.0048	17.2	6.0	2.2	2	1	0	2	2	2	1	Phage	integrase	SAM-like	domain
DUF4012	PF13196.6	gi|84489030|ref|YP_447262.1|	-	1.5e-28	100.1	0.0	2.1e-28	99.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4012)
Glyco_trans_1_2	PF13524.6	gi|84489031|ref|YP_447263.1|	-	4.4e-16	59.0	0.1	2.3e-14	53.5	0.0	3.5	4	0	0	4	4	4	1	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.26	gi|84489031|ref|YP_447263.1|	-	4.4e-11	42.9	0.1	9.2e-11	41.8	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.6	gi|84489031|ref|YP_447263.1|	-	6.9e-09	35.7	1.0	2.2e-08	34.1	0.9	1.8	1	1	0	1	1	1	1	Glycosyltransferase	like	family
Glyco_tranf_2_2	PF10111.9	gi|84489031|ref|YP_447263.1|	-	1.7e-08	34.3	2.7	1.7e-08	34.3	2.7	1.7	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
DUF3880	PF12996.7	gi|84489031|ref|YP_447263.1|	-	0.0043	17.1	0.0	0.013	15.6	0.0	1.9	1	0	0	1	1	1	1	DUF	based	on	E.	rectale	Gene	description	(DUF3880)
Glyco_tranf_2_3	PF13641.6	gi|84489031|ref|YP_447263.1|	-	0.0047	16.9	0.0	0.012	15.5	0.0	1.8	1	1	1	2	2	2	1	Glycosyltransferase	like	family	2
TMF_TATA_bd	PF12325.8	gi|84489031|ref|YP_447263.1|	-	0.0068	16.6	0.5	0.33	11.2	0.0	2.6	2	0	0	2	2	2	1	TATA	element	modulatory	factor	1	TATA	binding
Glyco_transf_28	PF03033.20	gi|84489031|ref|YP_447263.1|	-	0.011	15.8	0.0	0.029	14.4	0.0	1.7	1	0	0	1	1	1	0	Glycosyltransferase	family	28	N-terminal	domain
BRAP2	PF07576.12	gi|84489031|ref|YP_447263.1|	-	0.04	14.1	0.1	0.13	12.5	0.1	1.8	1	0	0	1	1	1	0	BRCA1-associated	protein	2
ABC2_membrane	PF01061.24	gi|84489032|ref|YP_447264.1|	-	1.1e-19	70.8	30.2	1.1e-19	70.8	30.2	2.0	1	1	1	2	2	2	1	ABC-2	type	transporter
SPA	PF08616.10	gi|84489032|ref|YP_447264.1|	-	0.12	12.4	1.9	0.24	11.3	1.9	1.5	1	0	0	1	1	1	0	Stabilization	of	polarity	axis
ABC2_membrane_3	PF12698.7	gi|84489032|ref|YP_447264.1|	-	1.7	7.7	45.6	5.9	5.9	45.6	1.7	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|84489033|ref|YP_447265.1|	-	5e-22	78.9	0.1	3.8e-21	76.0	0.1	2.1	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489033|ref|YP_447265.1|	-	2.7e-06	27.4	2.5	0.0014	18.6	0.9	2.5	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|84489033|ref|YP_447265.1|	-	7.8e-05	22.3	0.1	0.00015	21.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|84489033|ref|YP_447265.1|	-	0.0011	18.7	1.9	0.0046	16.7	1.5	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.7	gi|84489033|ref|YP_447265.1|	-	0.0039	16.1	0.1	0.0068	15.4	0.1	1.4	1	0	0	1	1	1	1	AAA-like	domain
RsgA_GTPase	PF03193.16	gi|84489033|ref|YP_447265.1|	-	0.0041	17.0	0.0	0.008	16.1	0.0	1.6	1	0	0	1	1	1	1	RsgA	GTPase
AAA_23	PF13476.6	gi|84489033|ref|YP_447265.1|	-	0.021	15.3	0.1	0.036	14.6	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|84489033|ref|YP_447265.1|	-	0.024	15.1	0.4	0.18	12.2	0.4	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.19	gi|84489033|ref|YP_447265.1|	-	0.059	12.8	1.5	0.64	9.4	0.3	2.3	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
IstB_IS21	PF01695.17	gi|84489033|ref|YP_447265.1|	-	0.065	13.0	0.1	2.5	7.8	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.12	gi|84489033|ref|YP_447265.1|	-	0.066	12.5	0.2	0.12	11.7	0.2	1.3	1	0	0	1	1	1	0	Zeta	toxin
NTPase_1	PF03266.15	gi|84489033|ref|YP_447265.1|	-	0.072	13.0	0.3	3.7	7.4	0.0	2.3	2	0	0	2	2	2	0	NTPase
MMR_HSR1	PF01926.23	gi|84489033|ref|YP_447265.1|	-	0.087	12.9	0.4	0.24	11.5	0.2	1.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_28	PF13521.6	gi|84489033|ref|YP_447265.1|	-	0.14	12.4	0.1	0.23	11.7	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
Glycos_transf_2	PF00535.26	gi|84489034|ref|YP_447266.1|	-	6.9e-24	84.6	0.1	9.8e-24	84.1	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489034|ref|YP_447266.1|	-	7.4e-17	62.0	0.0	9.9e-17	61.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|84489034|ref|YP_447266.1|	-	4.4e-08	33.3	0.1	6.7e-08	32.7	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_2	PF10111.9	gi|84489034|ref|YP_447266.1|	-	6.2e-07	29.2	5.1	1.6e-06	27.8	5.1	1.8	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489034|ref|YP_447266.1|	-	6.1e-05	23.5	0.1	0.0001	22.8	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_64	PF09258.10	gi|84489034|ref|YP_447266.1|	-	0.0024	17.2	1.0	0.0038	16.6	1.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	64	domain
Glyco_tranf_2_5	PF13712.6	gi|84489034|ref|YP_447266.1|	-	0.033	13.9	1.0	0.31	10.7	1.0	2.1	1	1	0	1	1	1	0	Glycosyltransferase	like	family
DUF2101	PF09874.9	gi|84489034|ref|YP_447266.1|	-	0.033	13.9	2.6	0.27	10.9	1.5	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2101)
Glyco_tranf_2_3	PF13641.6	gi|84489035|ref|YP_447267.1|	-	3e-20	73.1	0.0	3.7e-20	72.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.26	gi|84489035|ref|YP_447267.1|	-	4.2e-18	65.7	1.3	5.6e-18	65.3	0.5	1.7	2	1	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.6	gi|84489035|ref|YP_447267.1|	-	5.2e-07	29.6	1.9	4.9e-06	26.4	0.2	2.5	1	1	1	2	2	2	1	Glycosyltransferase	like	family
Glyco_tranf_2_2	PF10111.9	gi|84489035|ref|YP_447267.1|	-	0.00011	21.8	1.4	0.00038	20.0	1.4	1.8	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|84489035|ref|YP_447267.1|	-	0.00017	21.6	0.0	0.0004	20.4	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_7C	PF02709.14	gi|84489035|ref|YP_447267.1|	-	0.0032	17.1	0.1	0.0065	16.1	0.1	1.5	1	0	0	1	1	1	1	N-terminal	domain	of	galactosyltransferase
Glyco_transf_21	PF13506.6	gi|84489035|ref|YP_447267.1|	-	0.012	15.1	0.0	0.053	13.0	0.0	2.0	1	1	0	1	1	1	0	Glycosyl	transferase	family	21
Bac_transf	PF02397.16	gi|84489036|ref|YP_447268.1|	-	2.8e-71	238.9	0.2	5.6e-71	238.0	0.2	1.5	1	0	0	1	1	1	1	Bacterial	sugar	transferase
CoA_binding_3	PF13727.6	gi|84489036|ref|YP_447268.1|	-	1.7e-16	60.7	0.4	1.7e-16	60.7	0.4	2.0	1	1	1	2	2	2	1	CoA-binding	domain
PglD_N	PF17836.1	gi|84489036|ref|YP_447268.1|	-	3.6e-06	27.5	2.9	3.9e-06	27.4	1.0	2.0	2	0	0	2	2	2	1	PglD	N-terminal	domain
PHO4	PF01384.20	gi|84489037|ref|YP_447269.1|	-	0.16	11.0	16.9	0.38	9.7	16.8	1.6	1	1	0	1	1	1	0	Phosphate	transporter	family
UDPG_MGDP_dh_N	PF03721.14	gi|84489038|ref|YP_447270.1|	-	9.2e-66	221.0	1.8	1.5e-65	220.3	1.8	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|84489038|ref|YP_447270.1|	-	7.4e-39	131.9	0.1	1.5e-38	130.8	0.1	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|84489038|ref|YP_447270.1|	-	1.5e-32	112.2	0.2	3.8e-31	107.6	0.1	3.0	3	1	0	4	4	4	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|84489038|ref|YP_447270.1|	-	0.00068	19.6	0.0	0.0054	16.7	0.1	2.5	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.15	gi|84489038|ref|YP_447270.1|	-	0.00074	19.7	1.5	6.6	6.9	0.0	3.6	4	0	0	4	4	4	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox_2	PF07992.14	gi|84489038|ref|YP_447270.1|	-	0.0024	17.1	0.1	0.066	12.4	0.0	2.6	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.19	gi|84489038|ref|YP_447270.1|	-	0.0027	17.1	0.2	0.46	9.8	0.0	2.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|84489038|ref|YP_447270.1|	-	0.007	16.9	1.3	0.072	13.7	0.1	3.2	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|84489038|ref|YP_447270.1|	-	0.0088	15.9	0.1	0.073	13.0	0.0	2.6	3	1	1	4	4	4	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|84489038|ref|YP_447270.1|	-	0.03	14.0	0.0	0.069	12.8	0.0	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.21	gi|84489038|ref|YP_447270.1|	-	0.065	12.5	0.0	0.19	11.0	0.0	1.9	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Ldh_1_N	PF00056.23	gi|84489038|ref|YP_447270.1|	-	0.092	12.8	0.7	45	4.1	0.0	3.5	3	0	0	3	3	3	0	lactate/malate	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|84489038|ref|YP_447270.1|	-	0.13	12.9	0.2	30	5.3	0.0	3.7	3	1	2	5	5	5	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.18	gi|84489038|ref|YP_447270.1|	-	0.44	10.8	3.1	12	6.2	0.1	3.5	3	1	0	3	3	3	0	TrkA-N	domain
DUF1616	PF07760.11	gi|84489039|ref|YP_447271.1|	-	2e-28	99.6	31.5	1e-24	87.5	17.4	3.0	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF1616)
Tox-GHH2	PF15635.6	gi|84489039|ref|YP_447271.1|	-	0.0063	17.0	0.4	0.01	16.3	0.4	1.2	1	0	0	1	1	1	1	GHH	signature	containing	HNH/Endo	VII	superfamily	nuclease	toxin	2
FixG_C	PF11614.8	gi|84489039|ref|YP_447271.1|	-	0.032	14.5	0.5	0.032	14.5	0.5	1.7	2	0	0	2	2	2	0	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
DUF1980	PF09323.10	gi|84489039|ref|YP_447271.1|	-	0.21	11.5	24.8	0.042	13.8	1.1	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1980)
DUF4468	PF14730.6	gi|84489039|ref|YP_447271.1|	-	0.4	11.0	5.4	0.27	11.5	1.8	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
Bax1-I	PF01027.20	gi|84489039|ref|YP_447271.1|	-	3.3	7.5	38.1	3.1	7.6	6.3	2.6	1	1	0	2	2	2	0	Inhibitor	of	apoptosis-promoting	Bax1
DUF916	PF06030.12	gi|84489039|ref|YP_447271.1|	-	3.3	7.8	11.0	3.8	7.6	2.5	2.8	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF916)
DUF4199	PF13858.6	gi|84489039|ref|YP_447271.1|	-	5.4	7.4	38.1	0.49	10.8	11.0	3.4	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF4199)
DUF2157	PF09925.9	gi|84489039|ref|YP_447271.1|	-	7	6.4	15.3	7.7	6.3	6.4	3.0	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2157)
Glycos_transf_2	PF00535.26	gi|84489040|ref|YP_447272.1|	-	1.2e-43	148.9	7.5	1.2e-35	122.8	0.4	3.1	4	0	0	4	4	4	2	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489040|ref|YP_447272.1|	-	7.3e-16	58.5	1.6	7.3e-16	58.5	1.6	2.6	2	2	1	3	3	3	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489040|ref|YP_447272.1|	-	5.8e-11	42.7	0.0	2.3e-10	40.8	0.0	1.8	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489040|ref|YP_447272.1|	-	0.00058	20.3	0.1	0.0061	17.0	0.0	2.9	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|84489040|ref|YP_447272.1|	-	0.021	14.3	0.0	6.9	6.1	0.0	2.3	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
Lipid_DES	PF08557.10	gi|84489040|ref|YP_447272.1|	-	0.05	13.1	0.4	0.19	11.2	0.4	2.0	1	0	0	1	1	1	0	Sphingolipid	Delta4-desaturase	(DES)
LT-IIB	PF06453.11	gi|84489041|ref|YP_447273.1|	-	0.031	14.2	7.3	0.23	11.4	2.6	2.2	1	1	0	2	2	2	0	Type	II	heat-labile	enterotoxin	,	B	subunit	(LT-IIB)
TMEMspv1-c74-12	PF11044.8	gi|84489041|ref|YP_447273.1|	-	5.8	7.0	6.9	5.1	7.2	3.4	2.3	2	0	0	2	2	2	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
UDPG_MGDP_dh_N	PF03721.14	gi|84489042|ref|YP_447274.1|	-	3.4e-55	186.5	0.6	5.8e-55	185.8	0.6	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh_C	PF03720.15	gi|84489042|ref|YP_447274.1|	-	2.4e-25	89.0	0.5	7.4e-25	87.4	0.3	2.0	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|84489042|ref|YP_447274.1|	-	1.9e-23	82.5	0.1	5.4e-23	81.0	0.0	1.9	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
3HCDH_N	PF02737.18	gi|84489042|ref|YP_447274.1|	-	2.2e-05	24.4	0.0	4.5e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|84489042|ref|YP_447274.1|	-	0.00026	21.2	0.0	0.0013	19.0	0.0	2.2	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|84489042|ref|YP_447274.1|	-	0.0015	18.5	0.1	0.019	14.9	0.0	2.8	3	1	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox	PF00070.27	gi|84489042|ref|YP_447274.1|	-	0.0041	17.6	0.4	0.03	14.9	0.1	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.16	gi|84489042|ref|YP_447274.1|	-	0.0062	16.2	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
OrfB_IS605	PF01385.19	gi|84489042|ref|YP_447274.1|	-	0.014	15.6	0.0	0.52	10.5	0.1	2.3	2	0	0	2	2	2	0	Probable	transposase
Pyr_redox_2	PF07992.14	gi|84489042|ref|YP_447274.1|	-	0.021	14.1	0.1	0.044	13.0	0.1	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|84489042|ref|YP_447274.1|	-	0.061	13.6	0.1	0.37	11.0	0.0	2.4	2	0	0	2	2	2	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.19	gi|84489042|ref|YP_447274.1|	-	0.064	12.6	0.0	0.15	11.4	0.0	1.7	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Glycos_transf_2	PF00535.26	gi|84489043|ref|YP_447275.1|	-	3.2e-27	95.4	0.2	1.5e-26	93.3	0.1	2.3	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_trans_1_2	PF13524.6	gi|84489043|ref|YP_447275.1|	-	2e-10	40.9	0.0	5.6e-10	39.5	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF3880	PF12996.7	gi|84489043|ref|YP_447275.1|	-	6.7e-09	35.7	2.5	2.1e-08	34.1	0.1	2.9	2	0	0	2	2	2	1	DUF	based	on	E.	rectale	Gene	description	(DUF3880)
Glyco_tranf_2_2	PF10111.9	gi|84489043|ref|YP_447275.1|	-	8.9e-08	31.9	0.5	8.9e-08	31.9	0.5	3.2	3	0	0	3	3	3	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489043|ref|YP_447275.1|	-	0.0004	20.8	1.8	0.01	16.3	0.0	3.3	3	1	0	3	3	3	1	Glycosyl	transferase	family	2
Use1	PF09753.9	gi|84489044|ref|YP_447276.1|	-	0.0055	16.5	2.8	0.0086	15.8	2.8	1.3	1	0	0	1	1	1	1	Membrane	fusion	protein	Use1
OrfB_IS605	PF01385.19	gi|84489044|ref|YP_447276.1|	-	0.0076	16.5	2.1	0.016	15.4	2.1	1.5	1	0	0	1	1	1	1	Probable	transposase
RapA_C	PF12137.8	gi|84489044|ref|YP_447276.1|	-	0.079	12.0	4.3	0.11	11.5	3.8	1.4	1	1	0	1	1	1	0	RNA	polymerase	recycling	family	C-terminal
ISG65-75	PF11727.8	gi|84489044|ref|YP_447276.1|	-	0.38	9.9	3.6	0.62	9.2	3.6	1.2	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
Mrpl_C	PF18502.1	gi|84489044|ref|YP_447276.1|	-	0.4	11.0	9.9	2.1	8.7	6.4	2.5	1	1	0	2	2	2	0	54S	ribosomal	protein	L8	C-terminal	domain
Epimerase_2	PF02350.19	gi|84489045|ref|YP_447277.1|	-	9.2e-117	389.8	0.1	1.1e-116	389.5	0.1	1.1	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_4_2	PF13477.6	gi|84489045|ref|YP_447277.1|	-	0.0025	17.8	0.0	0.0055	16.7	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.6	gi|84489045|ref|YP_447277.1|	-	0.057	13.4	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
MGDG_synth	PF06925.11	gi|84489045|ref|YP_447277.1|	-	0.12	12.5	2.6	0.27	11.3	0.0	2.6	3	0	0	3	3	3	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
Glycos_transf_2	PF00535.26	gi|84489046|ref|YP_447278.1|	-	3.7e-32	111.5	2.8	5.2e-32	111.0	1.6	1.8	1	1	1	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489046|ref|YP_447278.1|	-	3.5e-11	43.1	0.6	3.5e-11	43.1	0.6	2.0	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489046|ref|YP_447278.1|	-	4.3e-08	33.3	0.0	8e-08	32.4	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489046|ref|YP_447278.1|	-	8.1e-05	23.1	0.0	0.00028	21.3	0.0	1.9	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GST_N_4	PF17172.4	gi|84489046|ref|YP_447278.1|	-	0.1	13.4	0.6	0.38	11.5	0.4	2.1	1	1	0	1	1	1	0	Glutathione	S-transferase	N-terminal	domain
Glycos_transf_2	PF00535.26	gi|84489048|ref|YP_447280.1|	-	5.2e-51	172.8	5.0	1.9e-37	128.7	0.4	2.6	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489048|ref|YP_447280.1|	-	1.4e-16	60.8	15.0	7.8e-11	42.0	2.0	2.8	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489048|ref|YP_447280.1|	-	3.3e-13	50.0	0.0	2.2e-10	40.8	0.0	2.2	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489048|ref|YP_447280.1|	-	5.6e-06	26.8	0.4	0.00019	21.9	0.1	2.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Tropomyosin	PF00261.20	gi|84489048|ref|YP_447280.1|	-	0.0051	16.2	63.5	0.0053	16.2	4.6	2.7	1	1	1	2	2	2	1	Tropomyosin
DUF3552	PF12072.8	gi|84489048|ref|YP_447280.1|	-	0.0098	15.3	76.5	0.15	11.4	20.0	4.5	1	1	3	4	4	4	2	Domain	of	unknown	function	(DUF3552)
ABC_tran_CTD	PF16326.5	gi|84489048|ref|YP_447280.1|	-	4.1	7.7	50.0	0.35	11.1	11.0	5.3	2	2	2	4	4	4	0	ABC	transporter	C-terminal	domain
WXG100	PF06013.12	gi|84489048|ref|YP_447280.1|	-	9.1	6.6	14.7	4.6	7.5	0.5	5.1	4	2	0	4	4	4	0	Proteins	of	100	residues	with	WXG
TruD	PF01142.18	gi|84489049|ref|YP_447281.1|	-	2.2e-142	474.7	0.1	2.5e-142	474.6	0.1	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
DUF948	PF06103.11	gi|84489050|ref|YP_447282.1|	-	0.02	15.1	1.3	0.032	14.5	1.3	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
Presenilin	PF01080.17	gi|84489050|ref|YP_447282.1|	-	0.024	13.4	1.4	0.029	13.1	1.4	1.1	1	0	0	1	1	1	0	Presenilin
GLF	PF03275.13	gi|84489051|ref|YP_447283.1|	-	1.2e-83	279.9	10.4	1.2e-83	279.9	10.4	1.8	2	0	0	2	2	2	1	UDP-galactopyranose	mutase
NAD_binding_8	PF13450.6	gi|84489051|ref|YP_447283.1|	-	1.5e-17	63.5	0.0	4.1e-17	62.2	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Amino_oxidase	PF01593.24	gi|84489051|ref|YP_447283.1|	-	6e-06	25.8	0.0	1.1e-05	25.0	0.0	1.5	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Pyr_redox	PF00070.27	gi|84489051|ref|YP_447283.1|	-	0.00037	21.0	0.1	0.0011	19.5	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|84489051|ref|YP_447283.1|	-	0.0012	18.2	0.0	0.0018	17.6	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|84489051|ref|YP_447283.1|	-	0.0014	17.8	0.0	0.0043	16.2	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|84489051|ref|YP_447283.1|	-	0.0019	17.5	0.0	0.0083	15.4	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|84489051|ref|YP_447283.1|	-	0.03	13.7	0.0	0.048	13.0	0.0	1.5	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
E1-E2_ATPase	PF00122.20	gi|84489052|ref|YP_447284.1|	-	8.9e-54	181.8	2.9	8.9e-54	181.8	2.9	2.8	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|84489052|ref|YP_447284.1|	-	1e-35	124.0	0.1	1.5e-35	123.4	0.1	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|84489052|ref|YP_447284.1|	-	4.5e-26	91.1	12.4	8e-14	51.8	2.1	3.0	3	0	0	3	3	3	2	Heavy-metal-associated	domain
PUA_2	PF14306.6	gi|84489052|ref|YP_447284.1|	-	0.0032	17.2	0.8	0.74	9.5	0.1	2.7	3	0	0	3	3	3	2	PUA-like	domain
DUF3213	PF11491.8	gi|84489052|ref|YP_447284.1|	-	0.37	11.0	11.3	0.3	11.3	0.2	4.2	4	1	1	5	5	5	0	Protein	of	unknown	function	(DUF3213)
DUF126	PF01989.16	gi|84489053|ref|YP_447285.1|	-	3.7e-38	129.2	0.6	5.2e-38	128.7	0.6	1.2	1	0	0	1	1	1	1	Aconitase	X	swivel	domain
DDR_swiveling	PF18427.1	gi|84489053|ref|YP_447285.1|	-	0.0065	16.5	2.2	0.0075	16.3	2.2	1.1	1	0	0	1	1	1	1	DD-reactivating	factor	swiveling	domain
GCV_T	PF01571.21	gi|84489054|ref|YP_447286.1|	-	0.071	12.5	2.5	0.46	9.8	1.7	2.5	2	1	1	3	3	3	0	Aminomethyltransferase	folate-binding	domain
DUF2099	PF09872.9	gi|84489055|ref|YP_447287.1|	-	1.2e-100	336.0	0.2	1.3e-100	335.8	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
ThiC_Rad_SAM	PF01964.18	gi|84489056|ref|YP_447288.1|	-	4.4e-193	641.7	3.9	5.1e-193	641.6	3.9	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
Sec61_beta	PF03911.16	gi|84489057|ref|YP_447289.1|	-	1.1e-13	50.9	0.1	1.3e-13	50.8	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
ThiF	PF00899.21	gi|84489058|ref|YP_447290.1|	-	4.6e-46	157.1	0.1	5.9e-46	156.8	0.1	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|84489058|ref|YP_447290.1|	-	6.2e-06	26.5	1.9	5.8e-05	23.3	1.9	2.1	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_7	PF13241.6	gi|84489058|ref|YP_447290.1|	-	1.1e-05	25.8	0.0	2.2e-05	24.8	0.0	1.5	1	1	0	1	1	1	1	Putative	NAD(P)-binding
Shikimate_DH	PF01488.20	gi|84489058|ref|YP_447290.1|	-	0.00045	20.3	0.3	0.002	18.2	0.0	2.0	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.18	gi|84489058|ref|YP_447290.1|	-	0.0058	16.9	0.5	0.02	15.2	0.1	2.1	2	0	0	2	2	2	1	TrkA-N	domain
PglD_N	PF17836.1	gi|84489058|ref|YP_447290.1|	-	0.1	13.3	0.6	0.31	11.7	0.2	2.1	1	1	1	2	2	2	0	PglD	N-terminal	domain
F420_oxidored	PF03807.17	gi|84489058|ref|YP_447290.1|	-	0.13	12.8	0.5	0.77	10.4	0.5	2.2	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
SpoIIM	PF01944.17	gi|84489059|ref|YP_447291.1|	-	3.5e-23	82.4	23.5	4.3e-23	82.1	23.5	1.1	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
IncD	PF17628.2	gi|84489059|ref|YP_447291.1|	-	3.6	7.4	7.5	1.1	9.0	2.8	2.2	1	1	0	2	2	2	0	Inclusion	membrane	protein	D
DDE_Tnp_IS240	PF13610.6	gi|84489060|ref|YP_447292.1|	-	0.0013	19.0	3.1	0.0013	19.0	3.1	2.9	2	2	2	4	4	4	1	DDE	domain
HTH_40	PF14493.6	gi|84489060|ref|YP_447292.1|	-	0.012	16.1	1.7	0.012	16.1	1.7	3.2	2	1	1	3	3	3	0	Helix-turn-helix	domain
zf-CHY	PF05495.12	gi|84489060|ref|YP_447292.1|	-	0.016	15.7	2.3	0.044	14.3	2.3	1.7	1	0	0	1	1	1	0	CHY	zinc	finger
Cytochrome_C7	PF14522.6	gi|84489060|ref|YP_447292.1|	-	0.018	15.0	2.6	0.049	13.6	2.6	1.7	1	0	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
CpXC	PF14353.6	gi|84489060|ref|YP_447292.1|	-	0.093	12.8	4.0	0.18	11.8	2.5	2.3	2	1	0	2	2	2	0	CpXC	protein
Zn-ribbon_8	PF09723.10	gi|84489060|ref|YP_447292.1|	-	0.093	12.9	1.6	3.1	8.0	0.2	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
Thioredoxin_4	PF13462.6	gi|84489060|ref|YP_447292.1|	-	0.46	10.6	5.5	0.65	10.1	0.6	3.0	2	1	1	3	3	3	0	Thioredoxin
FYVE	PF01363.21	gi|84489060|ref|YP_447292.1|	-	0.98	9.6	4.8	7.1	6.9	5.0	2.1	1	1	1	2	2	2	0	FYVE	zinc	finger
zf-ISL3	PF14690.6	gi|84489060|ref|YP_447292.1|	-	1.2	9.8	13.1	5.3	7.8	13.1	2.1	1	1	0	1	1	1	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS1595	PF12760.7	gi|84489060|ref|YP_447292.1|	-	2.1	8.4	10.1	6	6.9	10.1	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Gln-synt_C	PF00120.24	gi|84489061|ref|YP_447293.1|	-	5.4e-131	436.7	0.0	6.4e-131	436.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|84489061|ref|YP_447293.1|	-	2.5e-26	91.2	0.0	4.8e-26	90.3	0.0	1.5	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
Gln-synt_N_2	PF16952.5	gi|84489061|ref|YP_447293.1|	-	0.047	13.5	0.0	0.36	10.7	0.0	2.1	2	0	0	2	2	2	0	Glutamine	synthetase	N-terminal	domain
NRD1_2	PF01995.16	gi|84489062|ref|YP_447294.1|	-	2.9e-148	491.6	10.7	6.8e-76	254.7	2.7	2.1	2	0	0	2	2	2	2	NrpR	regulatory	domains	NRD1	and	2
HTH_12	PF08461.10	gi|84489062|ref|YP_447294.1|	-	8.1e-25	86.6	2.1	1.7e-24	85.5	2.1	1.6	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Fer4	PF00037.27	gi|84489063|ref|YP_447295.1|	-	1.5e-05	24.6	3.3	1.5e-05	24.6	3.3	3.1	3	1	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489063|ref|YP_447295.1|	-	5e-05	23.4	8.0	0.0001	22.4	8.0	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489063|ref|YP_447295.1|	-	5.1e-05	23.2	3.5	5.1e-05	23.2	3.5	3.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489063|ref|YP_447295.1|	-	0.00099	20.0	10.7	0.024	15.6	3.7	2.5	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|84489063|ref|YP_447295.1|	-	0.0011	18.9	2.2	0.0011	18.9	2.2	2.7	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489063|ref|YP_447295.1|	-	0.007	16.9	9.4	0.085	13.5	9.7	2.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489063|ref|YP_447295.1|	-	0.011	15.9	11.2	0.029	14.5	2.7	2.1	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Barwin	PF00967.17	gi|84489063|ref|YP_447295.1|	-	0.019	14.8	1.1	0.021	14.7	1.1	1.2	1	1	0	1	1	1	0	Barwin	family
Fer4_3	PF12798.7	gi|84489063|ref|YP_447295.1|	-	0.024	15.5	12.0	1.2	10.3	5.3	3.7	2	2	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489063|ref|YP_447295.1|	-	0.026	14.6	11.5	0.038	14.1	10.1	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_L32p	PF01783.23	gi|84489063|ref|YP_447295.1|	-	0.082	13.2	0.3	0.12	12.6	0.3	1.4	1	0	0	1	1	1	0	Ribosomal	L32p	protein	family
Fer4_8	PF13183.6	gi|84489063|ref|YP_447295.1|	-	0.11	13.0	7.2	0.98	9.9	3.2	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489063|ref|YP_447295.1|	-	0.13	12.9	7.2	0.24	11.9	2.2	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Synapsin_C	PF02750.14	gi|84489063|ref|YP_447295.1|	-	0.2	11.2	0.2	0.2	11.1	0.2	1.1	1	0	0	1	1	1	0	Synapsin,	ATP	binding	domain
Fer4_15	PF13459.6	gi|84489063|ref|YP_447295.1|	-	0.44	11.3	8.1	0.68	10.7	0.5	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
NMD3	PF04981.13	gi|84489063|ref|YP_447295.1|	-	1.2	8.6	7.4	1.4	8.4	7.4	1.0	1	0	0	1	1	1	0	NMD3	family
Fer4_4	PF12800.7	gi|84489063|ref|YP_447295.1|	-	1.4	9.6	11.9	3.2	8.5	3.1	3.3	2	2	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|84489064|ref|YP_447296.1|	-	3.9e-09	35.9	15.5	3.8e-08	32.8	1.8	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84489064|ref|YP_447296.1|	-	7.8e-05	22.5	13.6	0.00029	20.8	3.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489064|ref|YP_447296.1|	-	9.3e-05	22.5	10.4	0.00041	20.4	10.4	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489064|ref|YP_447296.1|	-	0.00015	21.6	2.3	0.00015	21.6	2.3	2.6	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489064|ref|YP_447296.1|	-	0.00026	21.9	9.9	0.0057	17.6	2.2	2.5	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|84489064|ref|YP_447296.1|	-	0.00027	21.0	12.4	0.00054	20.0	10.1	2.0	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489064|ref|YP_447296.1|	-	0.0013	19.5	16.7	0.025	15.5	6.1	3.3	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489064|ref|YP_447296.1|	-	0.0016	19.0	13.9	0.068	13.8	14.2	2.5	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489064|ref|YP_447296.1|	-	0.002	18.6	2.1	0.002	18.6	2.1	2.2	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489064|ref|YP_447296.1|	-	0.0024	18.3	11.5	0.057	13.9	3.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489064|ref|YP_447296.1|	-	0.0032	17.5	13.3	0.022	14.8	13.4	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489064|ref|YP_447296.1|	-	0.019	15.4	3.1	0.019	15.4	3.1	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|84489064|ref|YP_447296.1|	-	0.54	11.0	13.3	3.4	8.5	3.0	2.7	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Hormone_4	PF00220.17	gi|84489064|ref|YP_447296.1|	-	0.82	9.8	0.2	0.82	9.8	0.2	3.3	3	0	0	3	3	3	0	Neurohypophysial	hormones,	N-terminal	Domain
Fer4_18	PF13746.6	gi|84489064|ref|YP_447296.1|	-	3	8.1	11.4	0.22	11.7	2.4	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Ribosomal_S25	PF03297.15	gi|84489065|ref|YP_447297.1|	-	0.11	12.7	0.6	0.15	12.3	0.6	1.2	1	0	0	1	1	1	0	S25	ribosomal	protein
DUF2207	PF09972.9	gi|84489066|ref|YP_447298.1|	-	0.0026	16.6	2.3	0.0026	16.6	2.3	1.8	2	1	0	2	2	2	1	Predicted	membrane	protein	(DUF2207)
YrhC	PF14143.6	gi|84489066|ref|YP_447298.1|	-	2.9	8.1	8.5	7.5	6.7	0.0	2.9	3	0	0	3	3	3	0	YrhC-like	protein
DUF1297	PF06973.12	gi|84489067|ref|YP_447299.1|	-	2.7e-85	284.7	0.1	3.7e-85	284.2	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|84489067|ref|YP_447299.1|	-	3.4e-51	172.3	0.0	6e-51	171.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
Fer4	PF00037.27	gi|84489068|ref|YP_447300.1|	-	5.2e-13	48.2	15.3	2e-06	27.4	6.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84489068|ref|YP_447300.1|	-	2.7e-11	43.0	12.1	2.2e-05	24.3	2.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489068|ref|YP_447300.1|	-	4.5e-11	43.2	25.3	2.3e-08	34.5	13.8	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489068|ref|YP_447300.1|	-	1e-09	38.3	9.6	2.2e-05	24.5	1.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489068|ref|YP_447300.1|	-	2.8e-08	33.4	16.0	5.5e-05	23.0	5.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489068|ref|YP_447300.1|	-	2.8e-08	33.7	14.6	0.00024	21.2	6.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489068|ref|YP_447300.1|	-	3.1e-08	33.7	23.6	9.4e-07	28.9	11.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489068|ref|YP_447300.1|	-	7e-07	30.1	16.9	0.00085	20.2	3.5	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|84489068|ref|YP_447300.1|	-	7.5e-07	29.2	18.4	9.8e-05	22.6	2.6	2.4	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489068|ref|YP_447300.1|	-	2.9e-05	24.4	14.1	0.00023	21.5	14.1	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84489068|ref|YP_447300.1|	-	5.8e-05	23.5	10.1	0.0066	17.0	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|84489068|ref|YP_447300.1|	-	0.00046	20.7	12.2	0.0038	17.7	12.2	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489068|ref|YP_447300.1|	-	0.0012	19.6	23.3	0.0081	17.0	6.6	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|84489068|ref|YP_447300.1|	-	0.0017	19.1	5.6	0.0033	18.1	5.6	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|84489068|ref|YP_447300.1|	-	0.0036	18.1	12.1	0.15	12.9	0.5	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489068|ref|YP_447300.1|	-	0.056	13.6	13.9	0.25	11.5	3.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|84489068|ref|YP_447300.1|	-	1.5	9.0	9.5	0.87	9.8	2.3	2.0	2	0	0	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Molydop_binding	PF01568.21	gi|84489069|ref|YP_447301.1|	-	5.2e-12	45.8	0.0	7.5e-12	45.3	0.0	1.2	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|84489069|ref|YP_447301.1|	-	0.02	15.1	0.0	0.031	14.4	0.0	1.3	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
DUF3475	PF11961.8	gi|84489069|ref|YP_447301.1|	-	0.18	11.9	0.0	5	7.3	0.0	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3475)
Molybdopterin	PF00384.22	gi|84489070|ref|YP_447302.1|	-	3.7e-18	65.7	0.1	6.6e-13	48.4	0.0	2.2	2	1	0	2	2	2	2	Molybdopterin	oxidoreductase
RNA_pol_L_2	PF13656.6	gi|84489070|ref|YP_447302.1|	-	0.09	12.6	0.2	4	7.3	0.0	3.1	3	0	0	3	3	3	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RVT_3	PF13456.6	gi|84489070|ref|YP_447302.1|	-	0.16	11.8	0.0	3.2	7.6	0.0	2.4	2	0	0	2	2	2	0	Reverse	transcriptase-like
Amidohydro_3	PF07969.11	gi|84489071|ref|YP_447303.1|	-	2.5e-74	251.5	0.0	3e-74	251.2	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|84489071|ref|YP_447303.1|	-	6.2e-06	25.8	0.0	0.054	12.8	0.0	2.8	2	1	0	2	2	2	2	Amidohydrolase	family
GXGXG	PF01493.19	gi|84489072|ref|YP_447304.1|	-	1.6e-06	27.8	15.7	1.4e-05	24.8	11.2	2.7	1	1	1	2	2	2	2	GXGXG	motif
DUF2097	PF09870.9	gi|84489073|ref|YP_447305.1|	-	6.2e-28	96.8	6.0	6.8e-28	96.7	6.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
SIS	PF01380.22	gi|84489074|ref|YP_447306.1|	-	1.2e-18	67.3	0.2	1.9e-18	66.6	0.2	1.5	1	1	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|84489074|ref|YP_447306.1|	-	3.4e-09	36.9	0.8	0.00012	22.2	0.2	2.3	1	1	1	2	2	2	2	SIS	domain
DUF531	PF04407.12	gi|84489074|ref|YP_447306.1|	-	0.043	13.9	0.2	0.084	13.0	0.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF531)
SpoVT_C	PF15714.5	gi|84489074|ref|YP_447306.1|	-	0.061	13.4	0.3	0.18	11.9	0.0	1.9	2	0	0	2	2	2	0	Stage	V	sporulation	protein	T	C-terminal,	transcription	factor
PRMT5	PF05185.16	gi|84489074|ref|YP_447306.1|	-	0.13	12.1	0.1	0.52	10.1	0.1	1.9	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
HTH_1	PF00126.27	gi|84489075|ref|YP_447307.1|	-	1.5e-07	31.3	0.0	2.5e-07	30.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_50	PF18024.1	gi|84489075|ref|YP_447307.1|	-	0.0071	15.9	0.1	0.02	14.5	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_psq	PF05225.16	gi|84489075|ref|YP_447307.1|	-	0.025	14.3	0.1	0.15	11.9	0.0	2.1	2	0	0	2	2	2	0	helix-turn-helix,	Psq	domain
HTH_30	PF13556.6	gi|84489075|ref|YP_447307.1|	-	0.026	14.3	1.0	0.12	12.2	0.1	2.3	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
tRNA-synt_1f	PF01921.18	gi|84489076|ref|YP_447308.1|	-	1.8e-134	448.2	0.4	3.2e-134	447.4	0.4	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|84489076|ref|YP_447308.1|	-	1.3e-05	24.1	0.2	0.00048	19.0	0.0	2.6	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
zf-UBR	PF02207.20	gi|84489076|ref|YP_447308.1|	-	0.055	13.7	0.4	0.1	12.8	0.4	1.4	1	0	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
tRNA-synt_1e	PF01406.19	gi|84489076|ref|YP_447308.1|	-	0.067	12.5	0.0	0.46	9.8	0.0	2.3	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(C)	catalytic	domain
PrgH	PF09480.10	gi|84489076|ref|YP_447308.1|	-	0.072	12.4	0.5	0.12	11.7	0.5	1.3	1	0	0	1	1	1	0	Type	III	secretion	system	protein	PrgH-EprH	(PrgH)
zinc_ribbon_10	PF10058.9	gi|84489076|ref|YP_447308.1|	-	0.23	11.2	1.1	0.74	9.6	1.1	1.8	1	0	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
TrkA_N	PF02254.18	gi|84489077|ref|YP_447309.1|	-	5.9e-28	97.5	5.2	5.9e-28	97.5	5.2	1.6	2	0	0	2	2	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|84489077|ref|YP_447309.1|	-	3e-08	33.4	0.1	4.1e-07	29.7	0.0	2.6	2	1	0	2	2	2	1	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|84489077|ref|YP_447309.1|	-	3.6e-07	30.6	1.1	7.2e-07	29.6	0.8	1.7	1	1	1	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_3	PF01494.19	gi|84489077|ref|YP_447309.1|	-	9.8e-06	25.0	0.1	1.3e-05	24.7	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Shikimate_DH	PF01488.20	gi|84489077|ref|YP_447309.1|	-	2.8e-05	24.2	1.5	6.8e-05	23.0	1.0	1.9	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_10	PF13460.6	gi|84489077|ref|YP_447309.1|	-	3.1e-05	24.0	1.2	4.2e-05	23.5	1.2	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
Pyr_redox	PF00070.27	gi|84489077|ref|YP_447309.1|	-	4.9e-05	23.8	1.2	0.00011	22.7	0.2	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|84489077|ref|YP_447309.1|	-	7.5e-05	22.7	0.6	0.00016	21.6	0.3	1.6	1	1	1	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.17	gi|84489077|ref|YP_447309.1|	-	8.4e-05	21.9	3.3	0.0009	18.5	2.5	2.8	2	2	1	3	3	3	1	Thi4	family
AdoHcyase_NAD	PF00670.21	gi|84489077|ref|YP_447309.1|	-	0.00018	21.6	0.7	0.00032	20.8	0.7	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|84489077|ref|YP_447309.1|	-	0.00025	21.6	2.3	0.0015	19.0	0.9	2.3	1	1	1	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox_2	PF07992.14	gi|84489077|ref|YP_447309.1|	-	0.00028	20.2	1.5	0.0021	17.4	1.5	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|84489077|ref|YP_447309.1|	-	0.00033	20.4	0.4	0.0011	18.7	0.3	1.6	1	1	1	2	2	2	1	FAD	dependent	oxidoreductase
Rossmann-like	PF10727.9	gi|84489077|ref|YP_447309.1|	-	0.0006	19.7	0.1	0.00099	19.0	0.1	1.5	1	0	0	1	1	1	1	Rossmann-like	domain
AlaDh_PNT_C	PF01262.21	gi|84489077|ref|YP_447309.1|	-	0.00092	18.6	1.2	0.0013	18.0	1.2	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_8	PF13450.6	gi|84489077|ref|YP_447309.1|	-	0.0012	19.0	0.1	0.0023	18.1	0.1	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|84489077|ref|YP_447309.1|	-	0.0018	17.4	0.1	0.0034	16.5	0.1	1.6	2	0	0	2	2	2	1	Lycopene	cyclase	protein
adh_short	PF00106.25	gi|84489077|ref|YP_447309.1|	-	0.0021	17.6	1.1	0.0054	16.2	0.7	1.7	1	1	1	2	2	2	1	short	chain	dehydrogenase
Pyr_redox_3	PF13738.6	gi|84489077|ref|YP_447309.1|	-	0.0037	16.6	0.9	0.038	13.2	0.2	2.2	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.15	gi|84489077|ref|YP_447309.1|	-	0.0041	17.3	0.5	0.021	15.0	0.5	2.0	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|84489077|ref|YP_447309.1|	-	0.0046	17.0	0.4	0.0089	16.0	0.4	1.5	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
XdhC_C	PF13478.6	gi|84489077|ref|YP_447309.1|	-	0.0071	16.8	0.1	0.0095	16.4	0.1	1.3	1	0	0	1	1	1	1	XdhC	Rossmann	domain
ApbA	PF02558.16	gi|84489077|ref|YP_447309.1|	-	0.013	15.1	0.4	0.034	13.8	0.4	1.7	1	1	1	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
DFP	PF04127.15	gi|84489077|ref|YP_447309.1|	-	0.015	15.1	0.4	0.029	14.2	0.4	1.4	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
HI0933_like	PF03486.14	gi|84489077|ref|YP_447309.1|	-	0.017	13.8	0.0	0.034	12.9	0.0	1.5	1	0	0	1	1	1	0	HI0933-like	protein
NAD_binding_9	PF13454.6	gi|84489077|ref|YP_447309.1|	-	0.021	14.8	1.1	0.11	12.5	0.3	2.0	1	1	1	2	2	2	0	FAD-NAD(P)-binding
FAD_binding_2	PF00890.24	gi|84489077|ref|YP_447309.1|	-	0.025	13.7	0.1	0.037	13.1	0.1	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Semialdhyde_dh	PF01118.24	gi|84489077|ref|YP_447309.1|	-	0.028	14.8	0.1	0.047	14.1	0.1	1.5	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|84489077|ref|YP_447309.1|	-	0.037	14.3	0.7	0.06	13.6	0.7	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
MCR_alpha_N	PF02745.15	gi|84489077|ref|YP_447309.1|	-	0.046	13.1	0.6	0.065	12.6	0.6	1.3	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
ThiF	PF00899.21	gi|84489077|ref|YP_447309.1|	-	0.053	12.9	0.0	0.084	12.2	0.0	1.3	1	0	0	1	1	1	0	ThiF	family
GDP_Man_Dehyd	PF16363.5	gi|84489077|ref|YP_447309.1|	-	0.068	12.6	0.1	0.12	11.8	0.1	1.4	1	1	0	1	1	1	0	GDP-mannose	4,6	dehydratase
LpxI_N	PF17930.1	gi|84489077|ref|YP_447309.1|	-	0.073	13.0	0.0	0.49	10.3	0.1	2.2	2	1	0	2	2	2	0	LpxI	N-terminal	domain
KR	PF08659.10	gi|84489077|ref|YP_447309.1|	-	0.085	12.8	0.6	0.14	12.1	0.5	1.4	1	1	0	1	1	1	0	KR	domain
Gp_dh_N	PF00044.24	gi|84489077|ref|YP_447309.1|	-	0.22	11.9	2.8	0.19	12.1	0.6	2.1	2	1	0	2	2	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ThiC_Rad_SAM	PF01964.18	gi|84489078|ref|YP_447310.1|	-	5.9e-182	605.1	3.2	6.6e-182	604.9	3.2	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
AbiEi_4	PF13338.6	gi|84489078|ref|YP_447310.1|	-	0.11	12.7	0.0	6.2	7.1	0.0	2.7	2	0	0	2	2	2	0	Transcriptional	regulator,	AbiEi	antitoxin
PfkB	PF00294.24	gi|84489079|ref|YP_447311.1|	-	2.3e-57	194.6	0.0	2.7e-57	194.4	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
DUF3941	PF13081.6	gi|84489079|ref|YP_447311.1|	-	0.14	12.5	0.5	0.4	11.1	0.5	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3941)
YbjQ_1	PF01906.17	gi|84489080|ref|YP_447312.1|	-	5.1e-07	30.3	0.0	2.1e-06	28.3	0.0	2.0	1	1	0	1	1	1	1	Putative	heavy-metal-binding
NRDD	PF13597.6	gi|84489081|ref|YP_447313.1|	-	1.3e-158	529.3	1.0	1.9e-158	528.8	0.0	1.6	2	0	0	2	2	2	1	Anaerobic	ribonucleoside-triphosphate	reductase
ATP-cone	PF03477.16	gi|84489081|ref|YP_447313.1|	-	2.6e-12	47.1	3.8	1.3e-05	25.7	0.1	2.8	2	0	0	2	2	2	2	ATP	cone	domain
CDC4_D	PF16856.5	gi|84489081|ref|YP_447313.1|	-	0.009	15.9	0.1	0.034	14.0	0.1	2.0	1	0	0	1	1	1	1	Cell	division	control	protein	4	dimerisation	domain
zf-ribbon_3	PF13248.6	gi|84489081|ref|YP_447313.1|	-	0.04	13.3	1.0	0.083	12.3	1.0	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Phage_TAC_5	PF08890.11	gi|84489081|ref|YP_447313.1|	-	0.25	11.3	3.9	0.62	10.1	3.9	1.6	1	0	0	1	1	1	0	Phage	XkdN-like	tail	assembly	chaperone	protein,	TAC
DUF1062	PF06353.12	gi|84489081|ref|YP_447313.1|	-	0.44	11.4	2.8	26	5.6	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1062)
PolC_DP2	PF03833.13	gi|84489082|ref|YP_447314.1|	-	0	1178.6	0.6	0	1176.3	0.6	1.8	1	1	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DUF5442	PF17514.2	gi|84489082|ref|YP_447314.1|	-	0.22	11.8	1.8	10	6.4	0.0	3.4	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5442)
Zn_ribbon_SprT	PF17283.2	gi|84489082|ref|YP_447314.1|	-	0.37	10.7	2.9	14	5.7	0.0	2.8	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|84489082|ref|YP_447314.1|	-	2.8	8.1	5.7	2.1	8.5	0.4	2.6	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
RIFIN	PF02009.16	gi|84489083|ref|YP_447315.1|	-	0.00017	21.6	1.2	0.00019	21.5	1.2	1.0	1	0	0	1	1	1	1	Rifin
Orf78	PF06024.12	gi|84489083|ref|YP_447315.1|	-	0.0012	19.1	1.7	0.0015	18.8	1.7	1.2	1	0	0	1	1	1	1	Orf78	(ac78)
ABC2_membrane_3	PF12698.7	gi|84489083|ref|YP_447315.1|	-	0.0047	16.1	0.1	0.0048	16.1	0.1	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
TMEM154	PF15102.6	gi|84489083|ref|YP_447315.1|	-	0.011	15.6	6.7	0.014	15.3	6.5	1.3	1	1	0	1	1	1	0	TMEM154	protein	family
DUF5383	PF17355.2	gi|84489083|ref|YP_447315.1|	-	0.086	13.2	5.8	0.13	12.7	5.8	1.6	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5383)
DUF3377	PF11857.8	gi|84489083|ref|YP_447315.1|	-	0.88	9.5	7.6	0.11	12.4	1.5	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3377)
TraH	PF06122.11	gi|84489084|ref|YP_447316.1|	-	0.018	14.4	0.4	0.018	14.4	0.4	1.6	2	0	0	2	2	2	0	Conjugative	relaxosome	accessory	transposon	protein
DNA_ligase_A_M	PF01068.21	gi|84489085|ref|YP_447317.1|	-	5e-56	189.6	1.6	9.5e-56	188.7	1.6	1.5	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|84489085|ref|YP_447317.1|	-	1.6e-39	136.0	4.2	2.8e-37	128.7	1.6	2.4	1	1	1	2	2	2	2	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|84489085|ref|YP_447317.1|	-	4.5e-15	56.1	0.0	1e-14	54.9	0.0	1.7	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
RNA_ligase	PF09414.10	gi|84489085|ref|YP_447317.1|	-	1.3e-08	35.3	0.8	2e-08	34.7	0.8	1.3	1	0	0	1	1	1	1	RNA	ligase
Phage_min_cap2	PF06152.11	gi|84489085|ref|YP_447317.1|	-	0.0091	14.9	0.7	0.02	13.8	0.6	1.7	1	1	0	1	1	1	1	Phage	minor	capsid	protein	2
DUF4974	PF16344.5	gi|84489085|ref|YP_447317.1|	-	9.5	6.3	9.0	34	4.5	0.2	4.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4974)
tRNA_anti_2	PF13742.6	gi|84489086|ref|YP_447318.1|	-	1.4e-07	31.6	0.1	1.8e-07	31.2	0.1	1.1	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.25	gi|84489086|ref|YP_447318.1|	-	1.9e-07	31.0	0.3	3e-07	30.3	0.3	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
FlgH	PF02107.16	gi|84489086|ref|YP_447318.1|	-	0.013	15.2	5.4	1.1	8.9	0.2	3.0	2	1	1	3	3	3	0	Flagellar	L-ring	protein
FtsH_ext	PF06480.15	gi|84489086|ref|YP_447318.1|	-	0.19	12.1	2.4	0.25	11.7	2.4	1.1	1	0	0	1	1	1	0	FtsH	Extracellular
Fez1	PF06818.15	gi|84489087|ref|YP_447319.1|	-	0.00055	20.5	26.4	0.00055	20.5	26.4	1.8	1	1	1	2	2	2	1	Fez1
ZapB	PF06005.12	gi|84489087|ref|YP_447319.1|	-	0.00096	19.5	46.8	0.059	13.8	0.9	4.4	2	1	2	4	4	4	2	Cell	division	protein	ZapB
EzrA	PF06160.12	gi|84489087|ref|YP_447319.1|	-	0.003	15.8	36.8	0.0042	15.3	36.8	1.2	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
MCPsignal	PF00015.21	gi|84489087|ref|YP_447319.1|	-	0.0036	17.1	10.2	0.26	11.1	1.0	3.1	2	1	1	3	3	3	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
ParB	PF08775.10	gi|84489087|ref|YP_447319.1|	-	0.0089	16.5	8.7	0.0089	16.5	8.7	2.9	1	1	1	2	2	2	1	ParB	family
TMPIT	PF07851.13	gi|84489087|ref|YP_447319.1|	-	0.0092	15.3	12.6	0.0092	15.3	12.6	2.2	1	1	1	2	2	2	1	TMPIT-like	protein
Golgin_A5	PF09787.9	gi|84489087|ref|YP_447319.1|	-	0.015	14.8	32.1	0.031	13.8	12.3	2.0	1	1	1	2	2	2	0	Golgin	subfamily	A	member	5
DUF2937	PF11157.8	gi|84489087|ref|YP_447319.1|	-	0.017	14.8	2.4	1.7	8.3	0.7	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2937)
MAD	PF05557.13	gi|84489087|ref|YP_447319.1|	-	0.027	12.9	35.0	0.037	12.4	35.0	1.1	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
Spc7	PF08317.11	gi|84489087|ref|YP_447319.1|	-	0.03	13.2	37.0	0.57	9.0	15.0	2.1	1	1	1	2	2	2	0	Spc7	kinetochore	protein
Taxilin	PF09728.9	gi|84489087|ref|YP_447319.1|	-	0.031	13.5	35.7	0.57	9.3	13.9	2.2	1	1	1	2	2	2	0	Myosin-like	coiled-coil	protein
HOOK	PF05622.12	gi|84489087|ref|YP_447319.1|	-	0.043	12.0	37.9	0.13	10.4	37.3	1.7	1	1	0	1	1	1	0	HOOK	protein
IFT57	PF10498.9	gi|84489087|ref|YP_447319.1|	-	0.046	12.7	35.2	0.05	12.6	16.1	2.3	1	1	0	2	2	2	0	Intra-flagellar	transport	protein	57
CENP-F_leu_zip	PF10473.9	gi|84489087|ref|YP_447319.1|	-	0.051	13.6	37.1	0.6	10.1	16.6	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF1664	PF07889.12	gi|84489087|ref|YP_447319.1|	-	0.08	13.0	21.4	0.19	11.8	7.1	3.1	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
OmpH	PF03938.14	gi|84489087|ref|YP_447319.1|	-	0.14	12.5	32.2	0.3	11.4	15.3	2.7	1	1	1	2	2	2	0	Outer	membrane	protein	(OmpH-like)
FapA	PF03961.13	gi|84489087|ref|YP_447319.1|	-	0.16	10.5	36.2	0.058	12.0	15.2	2.2	1	1	1	2	2	2	0	Flagellar	Assembly	Protein	A
Sec34	PF04136.15	gi|84489087|ref|YP_447319.1|	-	0.19	11.6	28.8	0.21	11.5	9.2	3.4	1	1	2	3	3	3	0	Sec34-like	family
ATG16	PF08614.11	gi|84489087|ref|YP_447319.1|	-	0.22	11.7	40.6	0.62	10.3	18.5	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Baculo_PEP_C	PF04513.12	gi|84489087|ref|YP_447319.1|	-	0.24	11.4	27.2	0.19	11.8	5.8	2.2	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
KASH_CCD	PF14662.6	gi|84489087|ref|YP_447319.1|	-	0.38	10.6	42.5	3.1	7.6	28.7	2.5	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
KELK	PF15796.5	gi|84489087|ref|YP_447319.1|	-	0.41	11.1	31.2	0.97	9.9	10.6	2.9	1	1	2	3	3	3	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
Tup_N	PF08581.10	gi|84489087|ref|YP_447319.1|	-	0.56	10.5	34.1	1.6	9.1	6.7	4.7	1	1	4	5	5	5	0	Tup	N-terminal
SHE3	PF17078.5	gi|84489087|ref|YP_447319.1|	-	0.64	9.7	39.5	3	7.5	20.9	2.3	1	1	1	2	2	2	0	SWI5-dependent	HO	expression	protein	3
T3SSipB	PF16535.5	gi|84489087|ref|YP_447319.1|	-	0.64	10.5	13.3	2	8.9	4.6	2.4	1	1	1	2	2	2	0	Type	III	cell	invasion	protein	SipB
YabA	PF06156.13	gi|84489087|ref|YP_447319.1|	-	0.77	10.4	37.2	0.17	12.6	14.5	3.7	1	1	3	4	4	4	0	Initiation	control	protein	YabA
Laminin_II	PF06009.12	gi|84489087|ref|YP_447319.1|	-	0.87	9.6	29.3	0.38	10.8	8.0	2.2	1	1	1	2	2	2	0	Laminin	Domain	II
Lebercilin	PF15619.6	gi|84489087|ref|YP_447319.1|	-	0.88	9.2	41.1	0.32	10.6	22.5	2.4	1	1	1	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Cep57_CLD	PF14073.6	gi|84489087|ref|YP_447319.1|	-	1.1	9.3	33.5	2.1	8.3	25.8	2.2	1	1	1	2	2	2	0	Centrosome	localisation	domain	of	Cep57
GAS	PF13851.6	gi|84489087|ref|YP_447319.1|	-	1.2	8.5	46.1	0.32	10.3	7.0	3.0	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Mac	PF12464.8	gi|84489087|ref|YP_447319.1|	-	1.2	9.5	6.3	2.3	8.5	0.2	2.9	3	0	0	3	3	2	0	Maltose	acetyltransferase
UPF0242	PF06785.11	gi|84489087|ref|YP_447319.1|	-	1.3	9.1	41.9	1.7	8.7	15.7	3.0	1	1	2	3	3	3	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF1129	PF06570.11	gi|84489087|ref|YP_447319.1|	-	1.3	8.5	7.7	2.8	7.4	7.7	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF4407	PF14362.6	gi|84489087|ref|YP_447319.1|	-	1.4	8.2	26.2	1.6	8.1	3.9	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
RasGAP_C	PF03836.15	gi|84489087|ref|YP_447319.1|	-	1.5	9.0	36.8	2.1	8.5	12.3	3.2	1	1	2	3	3	3	0	RasGAP	C-terminus
DUF745	PF05335.13	gi|84489087|ref|YP_447319.1|	-	1.7	8.3	18.8	0.52	10.0	11.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF745)
Occludin_ELL	PF07303.13	gi|84489087|ref|YP_447319.1|	-	1.8	9.4	24.9	2	9.2	12.0	3.3	1	1	2	3	3	3	0	Occludin	homology	domain
DUF2968	PF11180.8	gi|84489087|ref|YP_447319.1|	-	1.8	8.1	18.1	2.3	7.8	5.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DUF3584	PF12128.8	gi|84489087|ref|YP_447319.1|	-	2.1	5.8	31.1	3	5.2	30.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Fmp27_WPPW	PF10359.9	gi|84489087|ref|YP_447319.1|	-	2.1	7.1	31.4	4	6.2	9.8	2.2	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
BLOC1_2	PF10046.9	gi|84489087|ref|YP_447319.1|	-	2.6	8.4	35.5	6.5	7.1	6.7	3.8	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
COG6	PF06419.11	gi|84489087|ref|YP_447319.1|	-	2.9	6.0	30.9	2.8	6.1	10.6	2.1	1	1	1	2	2	2	0	Conserved	oligomeric	complex	COG6
TMCO5	PF14992.6	gi|84489087|ref|YP_447319.1|	-	3.3	7.2	33.0	4.9	6.6	33.0	1.3	1	0	0	1	1	1	0	TMCO5	family
Jnk-SapK_ap_N	PF09744.9	gi|84489087|ref|YP_447319.1|	-	3.4	7.9	36.7	1.5	9.1	5.9	2.5	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
DUF948	PF06103.11	gi|84489087|ref|YP_447319.1|	-	4.1	7.7	16.7	3.4	8.0	5.2	3.1	2	2	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF812	PF05667.11	gi|84489087|ref|YP_447319.1|	-	4.3	6.1	34.2	4.8	5.9	12.9	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
FlaC_arch	PF05377.11	gi|84489087|ref|YP_447319.1|	-	4.7	7.7	37.1	2.7	8.5	1.9	6.1	2	2	5	7	7	7	0	Flagella	accessory	protein	C	(FlaC)
APG6_N	PF17675.1	gi|84489087|ref|YP_447319.1|	-	4.9	7.7	39.6	1.5	9.3	26.6	3.0	1	1	2	3	3	3	0	Apg6	coiled-coil	region
FPP	PF05911.11	gi|84489087|ref|YP_447319.1|	-	5.4	5.1	35.3	12	4.0	35.3	1.6	1	1	0	1	1	1	0	Filament-like	plant	protein,	long	coiled-coil
Mod_r	PF07200.13	gi|84489087|ref|YP_447319.1|	-	6	7.0	42.8	0.18	11.9	16.7	3.2	1	1	2	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
Ferritin-like	PF12902.7	gi|84489087|ref|YP_447319.1|	-	6.7	6.5	15.3	1.5	8.7	7.0	2.5	1	1	1	2	2	2	0	Ferritin-like
TPR_MLP1_2	PF07926.12	gi|84489087|ref|YP_447319.1|	-	6.9	6.7	40.4	0.09	12.8	12.2	3.6	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
CENP-H	PF05837.12	gi|84489087|ref|YP_447319.1|	-	7.2	7.1	31.7	2	8.9	14.6	3.7	1	1	4	5	5	5	0	Centromere	protein	H	(CENP-H)
TMF_DNA_bd	PF12329.8	gi|84489087|ref|YP_447319.1|	-	9	6.4	45.9	0.035	14.1	16.6	4.5	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	DNA	binding
PMT_2	PF13231.6	gi|84489088|ref|YP_447320.1|	-	1.5e-07	31.7	19.6	1.5e-07	31.7	19.6	3.6	3	1	1	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
FtsH_ext	PF06480.15	gi|84489089|ref|YP_447321.1|	-	0.0074	16.6	10.2	2.2	8.7	0.0	4.2	2	2	0	2	2	2	2	FtsH	Extracellular
LpxI_N	PF17930.1	gi|84489089|ref|YP_447321.1|	-	0.011	15.7	0.0	1.8	8.4	0.0	2.9	3	0	0	3	3	3	0	LpxI	N-terminal	domain
baeRF_family5	PF18846.1	gi|84489089|ref|YP_447321.1|	-	0.61	10.3	5.2	7.3	6.8	0.0	3.5	3	1	1	4	4	4	0	Bacterial	archaeo-eukaryotic	release	factor	family	5
PGM_PMM_I	PF02878.16	gi|84489090|ref|YP_447322.1|	-	1.1e-42	145.1	0.0	1.1e-41	141.7	0.0	2.5	3	0	0	3	3	3	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|84489090|ref|YP_447322.1|	-	1.5e-30	105.9	0.1	3.8e-30	104.5	0.1	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|84489090|ref|YP_447322.1|	-	3.3e-25	88.5	0.1	1.5e-24	86.3	0.0	2.0	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|84489090|ref|YP_447322.1|	-	2.8e-11	43.4	0.0	1.1e-10	41.6	0.0	2.0	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Fer4_16	PF13484.6	gi|84489091|ref|YP_447323.1|	-	1.6e-08	35.4	7.5	3.3e-08	34.3	7.5	1.6	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|84489091|ref|YP_447323.1|	-	2.8e-08	34.2	6.5	5.1e-08	33.4	6.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489091|ref|YP_447323.1|	-	2.5e-06	27.0	7.4	0.01	15.6	0.9	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84489091|ref|YP_447323.1|	-	7.1e-06	26.1	8.0	0.00024	21.2	9.4	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489091|ref|YP_447323.1|	-	0.00016	21.6	9.2	0.087	12.9	0.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489091|ref|YP_447323.1|	-	0.00036	20.6	7.3	0.0053	16.9	7.2	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489091|ref|YP_447323.1|	-	0.0012	19.4	8.5	0.018	15.6	8.3	2.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489091|ref|YP_447323.1|	-	0.0027	17.7	9.8	0.36	11.0	3.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489091|ref|YP_447323.1|	-	0.0088	16.5	9.1	0.044	14.2	9.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489091|ref|YP_447323.1|	-	0.018	16.0	12.6	0.071	14.1	0.8	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489091|ref|YP_447323.1|	-	0.038	14.1	10.8	0.52	10.5	2.3	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
rRNA_proc-arch	PF13234.6	gi|84489091|ref|YP_447323.1|	-	0.046	13.7	0.1	0.066	13.1	0.1	1.3	1	0	0	1	1	1	0	rRNA-processing	arch	domain
Fer4_18	PF13746.6	gi|84489091|ref|YP_447323.1|	-	2.5	8.3	6.7	5.9	7.1	0.4	2.5	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489091|ref|YP_447323.1|	-	2.8	8.7	6.1	9.5	7.0	0.2	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Cupin_2	PF07883.11	gi|84489092|ref|YP_447324.1|	-	8.8e-15	54.2	0.0	1.5e-14	53.4	0.0	1.4	1	0	0	1	1	1	1	Cupin	domain
HTH_19	PF12844.7	gi|84489092|ref|YP_447324.1|	-	7.8e-08	32.2	0.0	1.4e-07	31.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
AraC_binding	PF02311.19	gi|84489092|ref|YP_447324.1|	-	1.1e-06	28.6	0.0	1.5e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
HTH_3	PF01381.22	gi|84489092|ref|YP_447324.1|	-	3.7e-06	26.9	0.0	7e-06	26.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|84489092|ref|YP_447324.1|	-	5e-05	23.6	0.0	0.0005	20.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Cupin_3	PF05899.12	gi|84489092|ref|YP_447324.1|	-	0.0011	18.6	0.0	0.0021	17.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
Cupin_1	PF00190.22	gi|84489092|ref|YP_447324.1|	-	0.0017	18.0	0.0	0.0027	17.3	0.0	1.3	1	0	0	1	1	1	1	Cupin
Nbl1_Borealin_N	PF10444.9	gi|84489092|ref|YP_447324.1|	-	0.12	12.1	0.2	0.21	11.2	0.2	1.4	1	0	0	1	1	1	0	Nbl1	/	Borealin	N	terminal
AMP-binding	PF00501.28	gi|84489093|ref|YP_447325.1|	-	2.1e-75	254.0	0.0	2.5e-75	253.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|84489093|ref|YP_447325.1|	-	5.6e-22	78.5	0.1	1.4e-21	77.3	0.1	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
PRA-PH	PF01503.17	gi|84489094|ref|YP_447326.1|	-	6.9e-16	58.5	0.1	9.6e-16	58.0	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG	PF03819.17	gi|84489094|ref|YP_447326.1|	-	0.0061	16.7	0.3	0.0061	16.7	0.3	1.5	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
CBS	PF00571.28	gi|84489095|ref|YP_447327.1|	-	8.4e-27	93.4	8.3	2.6e-13	50.2	0.3	3.0	2	1	1	3	3	3	2	CBS	domain
ParBc	PF02195.18	gi|84489095|ref|YP_447327.1|	-	6.4e-14	52.0	0.2	3.8e-13	49.6	0.1	2.2	2	0	0	2	2	2	1	ParB-like	nuclease	domain
ParBc_2	PF08857.11	gi|84489095|ref|YP_447327.1|	-	0.01	15.9	1.3	0.032	14.3	0.3	2.1	2	1	0	2	2	2	0	Putative	ParB-like	nuclease
DUF262	PF03235.14	gi|84489095|ref|YP_447327.1|	-	0.072	13.3	0.1	0.21	11.7	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF262
GatB_N	PF02934.15	gi|84489096|ref|YP_447328.1|	-	6.7e-86	288.1	0.0	1e-85	287.5	0.0	1.3	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|84489096|ref|YP_447328.1|	-	2.1e-39	134.8	3.7	4e-39	133.8	3.7	1.5	1	0	0	1	1	1	1	GatB	domain
DUF3456	PF11938.8	gi|84489096|ref|YP_447328.1|	-	0.021	15.3	0.2	0.039	14.5	0.2	1.5	1	0	0	1	1	1	0	TLR4	regulator	and	MIR-interacting	MSAP
FXa_inhibition	PF14670.6	gi|84489096|ref|YP_447328.1|	-	0.047	14.0	0.9	0.074	13.3	0.2	1.7	2	0	0	2	2	2	0	Coagulation	Factor	Xa	inhibitory	site
PTRF_SDPR	PF15237.6	gi|84489096|ref|YP_447328.1|	-	0.16	11.6	4.7	4.5	6.8	0.1	2.5	3	0	0	3	3	3	0	PTRF/SDPR	family
Radical_SAM	PF04055.21	gi|84489097|ref|YP_447329.1|	-	6.1e-06	26.7	0.3	1.6e-05	25.3	0.3	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
BATS	PF06968.13	gi|84489097|ref|YP_447329.1|	-	0.046	13.9	0.0	0.1	12.8	0.0	1.5	1	0	0	1	1	1	0	Biotin	and	Thiamin	Synthesis	associated	domain
PRK	PF00485.18	gi|84489097|ref|YP_447329.1|	-	0.15	11.8	0.0	0.23	11.2	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
TPP_enzyme_C	PF02775.21	gi|84489098|ref|YP_447330.1|	-	1.5e-20	73.6	0.0	2.9e-20	72.6	0.0	1.5	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|84489098|ref|YP_447330.1|	-	0.00055	19.2	0.3	0.00095	18.4	0.2	1.4	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.20	gi|84489098|ref|YP_447330.1|	-	0.0068	15.4	0.0	0.0082	15.1	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
TPP_enzyme_N	PF02776.18	gi|84489099|ref|YP_447331.1|	-	1e-07	31.7	0.0	1.1e-07	31.6	0.0	1.1	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Ldh_2	PF02615.14	gi|84489100|ref|YP_447332.1|	-	9.2e-114	380.1	0.1	1e-113	379.9	0.1	1.0	1	0	0	1	1	1	1	Malate/L-lactate	dehydrogenase
AIRS_C	PF02769.22	gi|84489101|ref|YP_447333.1|	-	3.8e-22	79.1	0.0	6.6e-22	78.3	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|84489101|ref|YP_447333.1|	-	9.6e-16	58.2	1.1	2.2e-15	57.1	1.1	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Myosin_N	PF02736.19	gi|84489101|ref|YP_447333.1|	-	0.1	12.4	0.1	0.21	11.4	0.1	1.6	1	0	0	1	1	1	0	Myosin	N-terminal	SH3-like	domain
Beta-Casp	PF10996.8	gi|84489102|ref|YP_447334.1|	-	7.9e-27	93.7	0.0	1.8e-26	92.6	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
KH_7	PF17214.3	gi|84489102|ref|YP_447334.1|	-	1.3e-26	92.3	3.4	1.3e-26	92.3	3.4	3.2	3	0	0	3	3	3	2	KH	domain
Lactamase_B_6	PF16661.5	gi|84489102|ref|YP_447334.1|	-	5.2e-15	55.4	0.0	4.1e-14	52.4	0.0	2.1	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|84489102|ref|YP_447334.1|	-	1.3e-13	50.7	0.0	3.9e-13	49.1	0.0	1.9	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|84489102|ref|YP_447334.1|	-	1.6e-10	41.3	0.4	1.4e-09	38.3	0.5	2.2	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|84489102|ref|YP_447334.1|	-	4e-09	36.3	0.2	8.7e-09	35.2	0.2	1.6	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|84489102|ref|YP_447334.1|	-	0.0047	16.8	0.0	0.038	13.9	0.0	2.3	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.17	gi|84489102|ref|YP_447334.1|	-	0.088	12.7	0.1	0.088	12.7	0.1	3.4	4	0	0	4	4	4	0	KH	domain
Proteasome	PF00227.26	gi|84489103|ref|YP_447335.1|	-	1.4e-56	191.0	0.8	1.7e-56	190.7	0.8	1.0	1	0	0	1	1	1	1	Proteasome	subunit
ParA	PF10609.9	gi|84489104|ref|YP_447336.1|	-	1.5e-88	296.4	1.3	1.7e-88	296.2	1.3	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|84489104|ref|YP_447336.1|	-	1.7e-14	54.0	0.0	3.8e-14	52.8	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|84489104|ref|YP_447336.1|	-	2.8e-09	37.1	1.0	1.6e-08	34.7	0.6	2.3	2	1	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|84489104|ref|YP_447336.1|	-	6e-06	25.7	0.1	0.00078	18.7	0.1	2.2	2	0	0	2	2	2	2	Anion-transporting	ATPase
MipZ	PF09140.11	gi|84489104|ref|YP_447336.1|	-	1.1e-05	24.9	0.0	1.8e-05	24.2	0.0	1.4	1	1	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.18	gi|84489104|ref|YP_447336.1|	-	1.3e-05	24.8	0.1	0.0043	16.5	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
RsgA_GTPase	PF03193.16	gi|84489104|ref|YP_447336.1|	-	0.014	15.4	0.1	0.028	14.3	0.1	1.5	1	0	0	1	1	1	0	RsgA	GTPase
APS_kinase	PF01583.20	gi|84489104|ref|YP_447336.1|	-	0.028	14.3	0.0	0.044	13.7	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
SRP54	PF00448.22	gi|84489104|ref|YP_447336.1|	-	0.044	13.4	0.4	0.12	12.0	0.1	2.0	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.6	gi|84489104|ref|YP_447336.1|	-	0.072	13.6	0.0	0.15	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|84489104|ref|YP_447336.1|	-	0.099	12.2	0.0	0.21	11.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.22	gi|84489104|ref|YP_447336.1|	-	0.1	11.8	0.1	0.16	11.1	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
MCR_C	PF04609.12	gi|84489105|ref|YP_447337.1|	-	1.3e-119	398.3	0.8	1.5e-119	398.0	0.8	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
Gal11_ABD1	PF18535.1	gi|84489106|ref|YP_447338.1|	-	0.018	15.1	0.6	0.075	13.1	0.1	2.1	2	0	0	2	2	2	0	Gal11	activator-binding	domain	(ABD1)
DUF1002	PF06207.11	gi|84489106|ref|YP_447338.1|	-	0.47	10.0	9.2	0.81	9.2	7.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1002)
UPF0180	PF03698.13	gi|84489106|ref|YP_447338.1|	-	1.2	9.4	5.0	1.3	9.2	0.5	2.6	1	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
2-ph_phosp	PF04029.14	gi|84489107|ref|YP_447339.1|	-	6.2e-55	185.8	5.4	7.1e-55	185.6	5.4	1.0	1	0	0	1	1	1	1	2-phosphosulpholactate	phosphatase
TraB	PF01963.17	gi|84489108|ref|YP_447340.1|	-	2.7e-30	106.2	0.2	3.7e-30	105.7	0.2	1.1	1	0	0	1	1	1	1	TraB	family
DUF1922	PF09082.10	gi|84489109|ref|YP_447341.1|	-	1.8e-34	117.8	3.7	2e-34	117.7	3.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1922)
Toxin_35	PF10530.9	gi|84489109|ref|YP_447341.1|	-	0.013	15.5	3.0	0.019	14.9	3.0	1.3	1	0	0	1	1	1	0	Toxin	with	inhibitor	cystine	knot	ICK	or	Knottin	scaffold
ATP_bind_3	PF01171.20	gi|84489110|ref|YP_447342.1|	-	2.8e-14	53.3	0.0	4.4e-14	52.7	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|84489110|ref|YP_447342.1|	-	1e-07	31.1	0.0	1.5e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
PAPS_reduct	PF01507.19	gi|84489110|ref|YP_447342.1|	-	0.0014	18.7	0.0	0.0042	17.2	0.0	1.8	2	1	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
PolC_DP2	PF03833.13	gi|84489110|ref|YP_447342.1|	-	0.03	12.2	0.4	0.043	11.7	0.4	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
RecR	PF02132.15	gi|84489110|ref|YP_447342.1|	-	0.032	13.8	1.9	0.097	12.3	1.9	1.8	1	0	0	1	1	1	0	RecR	protein
zn-ribbon_14	PF16503.5	gi|84489110|ref|YP_447342.1|	-	1.1	8.9	5.0	0.27	10.8	1.2	2.0	2	0	0	2	2	2	0	Zinc-ribbon
DegT_DnrJ_EryC1	PF01041.17	gi|84489111|ref|YP_447343.1|	-	3.4e-140	467.5	0.6	3.8e-140	467.3	0.6	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|84489111|ref|YP_447343.1|	-	5.5e-11	42.2	0.3	2.2e-10	40.3	0.3	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|84489111|ref|YP_447343.1|	-	2.4e-10	40.2	0.2	4.7e-10	39.2	0.2	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|84489111|ref|YP_447343.1|	-	9.9e-10	37.5	0.1	1.5e-09	36.9	0.1	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|84489111|ref|YP_447343.1|	-	8.3e-08	31.6	0.2	1.7e-06	27.3	0.1	2.0	2	0	0	2	2	2	1	Aminotransferase	class-V
DUF1967	PF09269.11	gi|84489111|ref|YP_447343.1|	-	0.11	12.5	0.0	1.2	9.1	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1967)
TRM	PF02005.16	gi|84489112|ref|YP_447344.1|	-	3e-120	401.8	0.0	3.5e-120	401.6	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.13	gi|84489112|ref|YP_447344.1|	-	0.00032	20.2	0.3	0.00047	19.6	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|84489112|ref|YP_447344.1|	-	0.00058	19.7	0.0	0.00095	19.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|84489112|ref|YP_447344.1|	-	0.00058	19.4	0.1	0.0011	18.6	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|84489112|ref|YP_447344.1|	-	0.0015	17.9	0.0	0.0027	17.1	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|84489112|ref|YP_447344.1|	-	0.0028	18.3	0.0	0.0058	17.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|84489112|ref|YP_447344.1|	-	0.013	15.2	0.1	0.023	14.5	0.1	1.5	1	0	0	1	1	1	0	Met-10+	like-protein
TF_Zn_Ribbon	PF08271.12	gi|84489112|ref|YP_447344.1|	-	0.014	14.9	0.3	1.7	8.2	0.0	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
PCMT	PF01135.19	gi|84489112|ref|YP_447344.1|	-	0.026	14.3	0.1	0.14	11.9	0.1	1.9	2	0	0	2	2	2	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF777	PF05606.11	gi|84489112|ref|YP_447344.1|	-	0.072	12.8	2.1	0.073	12.8	0.1	2.0	2	0	0	2	2	2	0	Borrelia	burgdorferi	protein	of	unknown	function	(DUF777)
zf-RING_7	PF02591.15	gi|84489112|ref|YP_447344.1|	-	1.1	9.5	3.4	37	4.6	0.0	2.9	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
DUF2188	PF09954.9	gi|84489113|ref|YP_447345.1|	-	0.072	13.2	0.1	0.12	12.5	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2188)
HTH_24	PF13412.6	gi|84489114|ref|YP_447346.1|	-	1.7e-15	56.3	0.2	3.3e-15	55.4	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|84489114|ref|YP_447346.1|	-	7.6e-15	54.5	0.1	1.1e-14	53.9	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.12	gi|84489114|ref|YP_447346.1|	-	1.7e-06	27.9	0.4	4.6e-06	26.5	0.0	1.9	2	0	0	2	2	2	1	HTH	domain
HTH_23	PF13384.6	gi|84489114|ref|YP_447346.1|	-	1.8e-05	24.4	0.0	3.8e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
AsnC_trans_reg	PF01037.21	gi|84489114|ref|YP_447346.1|	-	2.1e-05	24.4	0.2	5.6e-05	23.0	0.0	1.7	2	0	0	2	2	2	1	Lrp/AsnC	ligand	binding	domain
Sigma70_r4_2	PF08281.12	gi|84489114|ref|YP_447346.1|	-	0.0002	21.0	0.0	0.00033	20.3	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_5	PF01022.20	gi|84489114|ref|YP_447346.1|	-	0.00046	20.0	0.0	0.00082	19.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.22	gi|84489114|ref|YP_447346.1|	-	0.00067	19.5	0.0	0.0013	18.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_38	PF13936.6	gi|84489114|ref|YP_447346.1|	-	0.00085	19.0	0.0	0.0018	18.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF2089	PF09862.9	gi|84489114|ref|YP_447346.1|	-	0.0025	17.8	0.5	0.74	9.9	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2089)
HTH_50	PF18024.1	gi|84489114|ref|YP_447346.1|	-	0.0026	17.3	0.0	0.012	15.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|84489114|ref|YP_447346.1|	-	0.0029	17.0	0.0	0.0047	16.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
MarR_2	PF12802.7	gi|84489114|ref|YP_447346.1|	-	0.0034	17.2	0.0	0.0057	16.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|84489114|ref|YP_447346.1|	-	0.0057	16.7	0.0	0.009	16.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_DeoR	PF08220.12	gi|84489114|ref|YP_447346.1|	-	0.0065	16.2	0.0	0.013	15.3	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|84489114|ref|YP_447346.1|	-	0.012	15.1	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
Fe_dep_repress	PF01325.19	gi|84489114|ref|YP_447346.1|	-	0.013	15.7	0.0	0.03	14.5	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_28	PF13518.6	gi|84489114|ref|YP_447346.1|	-	0.013	15.6	0.0	0.023	14.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|84489114|ref|YP_447346.1|	-	0.015	15.0	0.0	0.024	14.4	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
RPA_C	PF08784.11	gi|84489114|ref|YP_447346.1|	-	0.018	15.7	0.2	0.37	11.5	0.0	2.2	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Trp_repressor	PF01371.19	gi|84489114|ref|YP_447346.1|	-	0.022	14.9	0.2	0.15	12.2	0.0	2.1	2	0	0	2	2	2	0	Trp	repressor	protein
HTH_29	PF13551.6	gi|84489114|ref|YP_447346.1|	-	0.11	12.5	0.0	0.21	11.6	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_36	PF13730.6	gi|84489114|ref|YP_447346.1|	-	0.12	12.3	0.0	0.22	11.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|84489114|ref|YP_447346.1|	-	0.13	12.2	0.0	0.27	11.2	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|84489114|ref|YP_447346.1|	-	0.13	12.7	0.0	0.26	11.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
GCHY-1	PF02649.14	gi|84489115|ref|YP_447347.1|	-	1.3e-79	267.4	2.0	1.5e-79	267.2	2.0	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
DUF1517	PF07466.11	gi|84489115|ref|YP_447347.1|	-	0.039	14.1	0.2	0.065	13.4	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1517)
DUF2120	PF09893.9	gi|84489116|ref|YP_447348.1|	-	3.7e-48	163.1	0.8	4.2e-48	162.9	0.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
Radical_SAM	PF04055.21	gi|84489117|ref|YP_447349.1|	-	1e-11	45.5	0.0	1.8e-11	44.7	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Met_10	PF02475.16	gi|84489118|ref|YP_447350.1|	-	1.7e-60	204.2	0.3	2.4e-60	203.7	0.3	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
TRM	PF02005.16	gi|84489118|ref|YP_447350.1|	-	7.7e-08	31.9	0.0	9.6e-08	31.6	0.0	1.1	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_15	PF09445.10	gi|84489118|ref|YP_447350.1|	-	1.1e-06	28.3	0.0	1.8e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.14	gi|84489118|ref|YP_447350.1|	-	2e-06	27.5	0.0	3.8e-06	26.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.7	gi|84489118|ref|YP_447350.1|	-	0.00012	22.0	0.0	0.00074	19.5	0.0	2.2	2	1	1	3	3	3	1	Methyltransferase	domain
PrmA	PF06325.13	gi|84489118|ref|YP_447350.1|	-	0.00034	20.1	0.0	0.00049	19.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_23	PF13489.6	gi|84489118|ref|YP_447350.1|	-	0.00041	20.2	0.0	0.00057	19.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|84489118|ref|YP_447350.1|	-	0.00057	19.6	0.0	0.014	15.1	0.0	2.2	1	1	1	2	2	2	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_31	PF13847.6	gi|84489118|ref|YP_447350.1|	-	0.0013	18.6	0.0	0.0018	18.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|84489118|ref|YP_447350.1|	-	0.0018	18.9	0.0	0.0066	17.1	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.11	gi|84489118|ref|YP_447350.1|	-	0.0069	15.4	0.0	0.01	14.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
DNA_methylase	PF00145.17	gi|84489118|ref|YP_447350.1|	-	0.014	14.7	0.0	0.024	14.0	0.0	1.3	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
Methyltransf_11	PF08241.12	gi|84489118|ref|YP_447350.1|	-	0.016	15.9	0.0	0.032	14.9	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
PRMT5	PF05185.16	gi|84489118|ref|YP_447350.1|	-	0.063	13.1	0.0	0.089	12.6	0.0	1.3	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
Cons_hypoth95	PF03602.15	gi|84489118|ref|YP_447350.1|	-	0.085	12.5	0.0	0.14	11.8	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_12	PF08242.12	gi|84489118|ref|YP_447350.1|	-	0.14	12.9	0.0	0.25	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Radical_SAM	PF04055.21	gi|84489119|ref|YP_447351.1|	-	2e-06	28.3	7.1	3.3e-05	24.3	4.9	3.1	2	2	0	2	2	2	1	Radical	SAM	superfamily
DUF4869	PF16163.5	gi|84489119|ref|YP_447351.1|	-	0.031	14.0	0.0	0.24	11.1	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4869)
MCR_C	PF04609.12	gi|84489120|ref|YP_447352.1|	-	2.7e-06	26.7	0.3	6e-06	25.5	0.3	1.6	1	1	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
MtrE	PF04206.12	gi|84489121|ref|YP_447353.1|	-	9.6e-114	379.3	18.2	1.1e-113	379.1	18.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	E
NADHdh_A3	PF14987.6	gi|84489121|ref|YP_447353.1|	-	0.41	11.0	3.0	1.4	9.3	1.1	2.5	1	1	1	2	2	2	0	NADH	dehydrogenase	1	alpha	subcomplex	subunit	3
MtrD	PF04207.12	gi|84489122|ref|YP_447354.1|	-	6e-89	297.5	24.1	7.3e-89	297.2	24.1	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	D
Pilin_N	PF07790.11	gi|84489122|ref|YP_447354.1|	-	0.085	13.8	2.4	2.1	9.4	0.2	2.8	2	1	0	2	2	2	0	Archaeal	Type	IV	pilin,	N-terminal
MtrC	PF04211.13	gi|84489123|ref|YP_447355.1|	-	9.8e-88	293.7	31.8	1.1e-87	293.5	31.8	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
DUF2070	PF09843.9	gi|84489123|ref|YP_447355.1|	-	0.25	9.6	33.7	0.056	11.7	29.9	1.7	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
MtrB	PF05440.12	gi|84489124|ref|YP_447356.1|	-	2.7e-18	66.2	0.2	3.2e-18	65.9	0.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	subunit	B
MtrA	PF04208.14	gi|84489125|ref|YP_447357.1|	-	1.2e-80	269.3	4.0	1.9e-80	268.5	4.0	1.3	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
MtrF	PF09472.10	gi|84489125|ref|YP_447357.1|	-	0.001	18.4	0.2	0.003	16.9	0.2	1.8	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrF	PF09472.10	gi|84489126|ref|YP_447358.1|	-	5.3e-17	61.0	0.2	6e-17	60.8	0.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
DUF3930	PF13067.6	gi|84489126|ref|YP_447358.1|	-	0.012	15.9	0.1	0.015	15.5	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3930)
MtrG	PF04210.13	gi|84489127|ref|YP_447359.1|	-	5.2e-19	67.9	0.4	6.3e-19	67.6	0.4	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
KxDL	PF10241.9	gi|84489127|ref|YP_447359.1|	-	0.014	15.6	0.0	0.017	15.4	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
DUF2116	PF09889.9	gi|84489127|ref|YP_447359.1|	-	0.062	13.3	0.0	0.076	13.0	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF2207	PF09972.9	gi|84489127|ref|YP_447359.1|	-	0.11	11.3	0.0	0.11	11.3	0.0	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF3763	PF12592.8	gi|84489127|ref|YP_447359.1|	-	0.11	12.6	0.1	0.15	12.1	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3763)
Phasin	PF05597.11	gi|84489127|ref|YP_447359.1|	-	0.12	12.4	0.1	0.13	12.2	0.1	1.1	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Amnionless	PF14828.6	gi|84489127|ref|YP_447359.1|	-	0.22	10.3	0.0	0.22	10.3	0.0	1.0	1	0	0	1	1	1	0	Amnionless
MtrH	PF02007.18	gi|84489128|ref|YP_447360.1|	-	4e-135	449.7	2.2	4.6e-135	449.5	2.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	MtrH	subunit
DUF2114	PF09887.9	gi|84489129|ref|YP_447361.1|	-	2.2e-174	580.2	4.0	2.6e-174	580.0	4.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
DUF3800	PF12686.7	gi|84489129|ref|YP_447361.1|	-	0.16	12.6	1.4	0.4	11.3	1.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3800)
Pneumo_M2	PF07380.11	gi|84489129|ref|YP_447361.1|	-	0.2	12.0	9.8	3.8	7.8	5.1	3.4	2	1	1	3	3	3	0	Pneumovirus	M2	protein
Tsc35	PF15079.6	gi|84489129|ref|YP_447361.1|	-	0.45	10.1	2.5	0.75	9.3	2.5	1.3	1	0	0	1	1	1	0	Testis-specific	protein	35
Peptidase_M48	PF01435.18	gi|84489130|ref|YP_447362.1|	-	1.9e-39	135.5	0.2	1.9e-39	135.5	0.2	1.6	2	0	0	2	2	2	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|84489130|ref|YP_447362.1|	-	0.00091	18.5	0.1	0.0015	17.8	0.1	1.3	1	0	0	1	1	1	1	BlaR1	peptidase	M56
DUF2207	PF09972.9	gi|84489130|ref|YP_447362.1|	-	6.9	5.3	6.8	24	3.5	0.0	2.0	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
NTP_transf_3	PF12804.7	gi|84489131|ref|YP_447363.1|	-	4.9e-14	53.0	0.0	6e-14	52.7	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|84489131|ref|YP_447363.1|	-	7.2e-08	32.6	0.0	8.5e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
IspD	PF01128.19	gi|84489131|ref|YP_447363.1|	-	3.5e-07	30.2	0.0	7e-07	29.2	0.0	1.6	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transferase	PF00483.23	gi|84489131|ref|YP_447363.1|	-	3.6e-07	30.0	0.0	6.8e-07	29.1	0.0	1.5	1	1	0	1	1	1	1	Nucleotidyl	transferase
CofC	PF01983.16	gi|84489131|ref|YP_447363.1|	-	0.01	15.0	0.2	0.017	14.3	0.2	1.3	1	0	0	1	1	1	0	Guanylyl	transferase	CofC	like
PRC	PF05239.16	gi|84489132|ref|YP_447364.1|	-	1.7e-08	34.4	0.8	2.6e-08	33.8	0.8	1.3	1	1	0	1	1	1	1	PRC-barrel	domain
UPF0051	PF01458.17	gi|84489133|ref|YP_447365.1|	-	1.4e-53	181.8	0.8	2e-53	181.3	0.8	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Glyco_hydro_98C	PF08307.11	gi|84489133|ref|YP_447365.1|	-	0.0031	17.0	0.2	0.006	16.1	0.2	1.6	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	98	C-terminal	domain
ABC_tran	PF00005.27	gi|84489134|ref|YP_447366.1|	-	6.7e-23	81.7	0.1	1e-22	81.2	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489134|ref|YP_447366.1|	-	2.5e-07	30.8	4.1	0.0022	17.9	0.5	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|84489134|ref|YP_447366.1|	-	4.2e-05	23.4	1.8	6.4e-05	22.8	1.8	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|84489134|ref|YP_447366.1|	-	0.00029	20.5	0.1	0.00054	19.7	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|84489134|ref|YP_447366.1|	-	0.00036	20.0	1.9	0.0057	16.1	1.9	2.3	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|84489134|ref|YP_447366.1|	-	0.0044	17.0	0.1	0.0081	16.1	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
DUF150	PF02576.17	gi|84489134|ref|YP_447366.1|	-	0.0054	17.1	0.5	0.014	15.8	0.1	1.8	2	0	0	2	2	2	1	RimP	N-terminal	domain
AAA_27	PF13514.6	gi|84489134|ref|YP_447366.1|	-	0.011	15.3	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|84489134|ref|YP_447366.1|	-	0.031	14.8	8.5	0.32	11.5	8.6	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|84489134|ref|YP_447366.1|	-	0.063	12.9	0.0	0.17	11.4	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
VPS38	PF17649.1	gi|84489134|ref|YP_447366.1|	-	0.083	11.8	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	Vacuolar	protein	sorting	38
MMR_HSR1	PF01926.23	gi|84489134|ref|YP_447366.1|	-	0.13	12.3	0.2	0.39	10.8	0.2	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
FlpD	PF02662.16	gi|84489135|ref|YP_447367.1|	-	5e-55	184.8	0.0	5.6e-55	184.6	0.0	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Oxidored_q6	PF01058.22	gi|84489136|ref|YP_447368.1|	-	3.2e-31	107.9	0.0	5.2e-31	107.2	0.0	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|84489137|ref|YP_447369.1|	-	7.5e-34	117.5	0.0	1.1e-16	60.9	0.0	3.2	1	1	1	3	3	3	3	Nickel-dependent	hydrogenase
BATS	PF06968.13	gi|84489138|ref|YP_447370.1|	-	0.034	14.3	0.0	0.063	13.4	0.0	1.4	1	0	0	1	1	1	0	Biotin	and	Thiamin	Synthesis	associated	domain
MCR_beta	PF02241.18	gi|84489139|ref|YP_447371.1|	-	1.6e-137	457.0	5.8	2.1e-137	456.7	5.8	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	beta	subunit,	C-terminal	domain
MCR_beta_N	PF02783.15	gi|84489139|ref|YP_447371.1|	-	6.6e-74	247.5	0.5	6.6e-74	247.5	0.5	1.7	2	0	0	2	2	2	1	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
MCR_D	PF02505.14	gi|84489140|ref|YP_447372.1|	-	2.8e-55	186.1	0.6	3.2e-55	185.9	0.6	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	D
MCR_gamma	PF02240.16	gi|84489141|ref|YP_447373.1|	-	4.1e-132	438.9	0.9	4.7e-132	438.7	0.9	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	gamma	subunit
MCR_alpha_N	PF02745.15	gi|84489142|ref|YP_447374.1|	-	2.2e-145	483.0	0.0	2.9e-145	482.7	0.0	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
MCR_alpha	PF02249.17	gi|84489142|ref|YP_447374.1|	-	1.3e-67	226.0	3.7	2.6e-67	225.1	3.1	1.8	2	0	0	2	2	2	1	Methyl-coenzyme	M	reductase	alpha	subunit,	C-terminal	domain
MCR_beta_N	PF02783.15	gi|84489142|ref|YP_447374.1|	-	0.081	12.5	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
DZR	PF12773.7	gi|84489143|ref|YP_447375.1|	-	0.0015	18.5	1.2	0.0027	17.7	1.2	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|84489143|ref|YP_447375.1|	-	0.0066	16.1	5.5	0.038	13.7	5.5	2.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|84489143|ref|YP_447375.1|	-	0.037	13.4	3.0	0.066	12.6	3.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|84489143|ref|YP_447375.1|	-	0.067	12.7	4.8	0.13	11.8	4.8	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-RanBP	PF00641.18	gi|84489143|ref|YP_447375.1|	-	0.12	11.7	2.9	0.32	10.3	2.9	1.7	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
TM2	PF05154.16	gi|84489143|ref|YP_447375.1|	-	2.1	8.8	13.5	4.9	7.6	13.5	1.6	1	1	0	1	1	1	0	TM2	domain
Presenilin	PF01080.17	gi|84489143|ref|YP_447375.1|	-	5.3	5.7	9.5	8.5	5.0	9.6	1.3	1	1	0	1	1	1	0	Presenilin
Amidohydro_1	PF01979.20	gi|84489144|ref|YP_447376.1|	-	1e-27	97.4	2.5	1.7e-27	96.6	2.5	1.4	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|84489144|ref|YP_447376.1|	-	6.8e-12	45.6	0.0	2.4e-07	30.6	0.0	2.8	3	0	0	3	3	3	2	Amidohydrolase	family
TatD_DNase	PF01026.21	gi|84489144|ref|YP_447376.1|	-	0.0024	17.3	2.5	0.068	12.5	0.0	2.8	2	1	1	3	3	3	2	TatD	related	DNase
DHOase	PF12890.7	gi|84489144|ref|YP_447376.1|	-	0.0067	16.3	0.1	0.028	14.3	0.0	2.2	1	1	1	2	2	2	1	Dihydro-orotase-like
Motile_Sperm	PF00635.26	gi|84489144|ref|YP_447376.1|	-	0.0071	16.2	1.0	0.12	12.2	0.4	2.7	2	0	0	2	2	2	1	MSP	(Major	sperm	protein)	domain
HIGH_NTase1_ass	PF16581.5	gi|84489145|ref|YP_447377.1|	-	1.9e-69	233.7	9.6	2.5e-69	233.3	9.6	1.1	1	0	0	1	1	1	1	Cytidyltransferase-related	C-terminal	region
HIGH_NTase1	PF05636.11	gi|84489145|ref|YP_447377.1|	-	1.1e-25	90.8	1.5	6.4e-14	52.0	0.0	2.1	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
CTP_transf_like	PF01467.26	gi|84489145|ref|YP_447377.1|	-	0.00087	19.5	0.0	0.0097	16.1	0.0	2.3	1	1	0	1	1	1	1	Cytidylyltransferase-like
HHH_3	PF12836.7	gi|84489145|ref|YP_447377.1|	-	0.0058	16.9	0.1	0.014	15.6	0.1	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Tnp_DNA_bind	PF14706.6	gi|84489145|ref|YP_447377.1|	-	0.087	12.7	0.0	0.19	11.6	0.0	1.5	1	0	0	1	1	1	0	Transposase	DNA-binding
FKBP26_C	PF18046.1	gi|84489146|ref|YP_447378.1|	-	2.1e-25	88.6	2.5	4.9e-25	87.4	2.5	1.6	1	0	0	1	1	1	1	FKBP26_C-terminal
FKBP_C	PF00254.28	gi|84489146|ref|YP_447378.1|	-	5.1e-14	52.4	0.1	1.3e-13	51.1	0.0	1.7	2	1	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Pcc1	PF09341.10	gi|84489147|ref|YP_447379.1|	-	0.0071	16.5	0.0	0.013	15.6	0.0	1.6	1	1	0	1	1	1	1	Transcription	factor	Pcc1
NapD	PF03927.13	gi|84489147|ref|YP_447379.1|	-	0.011	15.8	0.3	0.016	15.3	0.3	1.2	1	0	0	1	1	1	0	NapD	protein
Ribosomal_L16	PF00252.18	gi|84489148|ref|YP_447380.1|	-	4.8e-30	104.3	0.4	5.9e-30	104.0	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
PPDK_N	PF01326.19	gi|84489149|ref|YP_447381.1|	-	1.6e-115	385.9	0.0	2.8e-115	385.1	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|84489149|ref|YP_447381.1|	-	1.4e-89	300.1	0.1	2.5e-89	299.3	0.1	1.4	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|84489149|ref|YP_447381.1|	-	4e-27	93.7	1.5	1.5e-26	91.9	1.5	2.1	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Radical_SAM	PF04055.21	gi|84489149|ref|YP_447381.1|	-	0.0086	16.5	0.1	6.3	7.1	0.0	2.7	1	1	1	2	2	2	2	Radical	SAM	superfamily
Epimerase_2	PF02350.19	gi|84489149|ref|YP_447381.1|	-	0.059	12.2	0.1	0.18	10.6	0.0	1.8	2	0	0	2	2	2	0	UDP-N-acetylglucosamine	2-epimerase
Peptidase_M17_N	PF02789.17	gi|84489149|ref|YP_447381.1|	-	0.092	12.6	0.0	1.6	8.6	0.0	2.6	2	0	0	2	2	2	0	Cytosol	aminopeptidase	family,	N-terminal	domain
Pyridoxal_deC	PF00282.19	gi|84489150|ref|YP_447382.1|	-	2.4e-32	112.1	0.0	3.7e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.19	gi|84489150|ref|YP_447382.1|	-	3.5e-15	55.9	0.2	4.1e-14	52.3	0.2	2.0	1	1	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|84489150|ref|YP_447382.1|	-	5.2e-08	32.6	0.0	9.3e-08	31.8	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|84489150|ref|YP_447382.1|	-	4.1e-05	22.9	0.0	0.002	17.4	0.0	2.1	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|84489150|ref|YP_447382.1|	-	0.00016	21.1	0.0	0.0011	18.3	0.0	1.9	1	1	1	2	2	2	1	Beta-eliminating	lyase
OKR_DC_1	PF01276.20	gi|84489150|ref|YP_447382.1|	-	0.00072	18.4	0.1	0.002	16.9	0.1	1.7	1	1	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	major	domain
GDC-P	PF02347.16	gi|84489150|ref|YP_447382.1|	-	0.0076	15.1	0.1	0.012	14.4	0.1	1.3	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
ThiS	PF02597.20	gi|84489151|ref|YP_447383.1|	-	3.9e-10	40.2	0.5	4.3e-10	40.1	0.5	1.1	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.6	gi|84489151|ref|YP_447383.1|	-	0.0033	17.4	4.6	0.0042	17.1	4.6	1.3	1	0	0	1	1	1	1	ThiS-like	ubiquitin
TGS	PF02824.21	gi|84489151|ref|YP_447383.1|	-	0.047	13.8	0.6	0.074	13.1	0.6	1.5	1	1	0	1	1	1	0	TGS	domain
Ub-Mut7C	PF14451.6	gi|84489151|ref|YP_447383.1|	-	0.069	13.0	0.1	0.081	12.8	0.1	1.1	1	0	0	1	1	1	0	Mut7-C	ubiquitin
ATP_bind_3	PF01171.20	gi|84489152|ref|YP_447384.1|	-	1.4e-16	60.7	0.0	2.7e-16	59.9	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|84489152|ref|YP_447384.1|	-	3e-07	29.6	0.2	4.9e-07	28.9	0.2	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
zn-ribbon_14	PF16503.5	gi|84489152|ref|YP_447384.1|	-	1.4e-06	27.6	1.8	1.4e-06	27.6	1.8	3.3	4	0	0	4	4	4	1	Zinc-ribbon
NAD_synthase	PF02540.17	gi|84489152|ref|YP_447384.1|	-	0.00031	19.9	0.2	0.00048	19.3	0.2	1.3	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|84489152|ref|YP_447384.1|	-	0.0038	16.8	0.1	0.0038	16.8	0.1	1.9	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|84489152|ref|YP_447384.1|	-	0.032	13.9	0.0	0.045	13.4	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
PAPS_reduct	PF01507.19	gi|84489152|ref|YP_447384.1|	-	0.047	13.7	0.0	0.089	12.8	0.0	1.4	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
zf-C4pol	PF14260.6	gi|84489152|ref|YP_447384.1|	-	0.36	11.3	15.1	4.6	7.8	1.5	3.5	3	0	0	3	3	3	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DUF4268	PF14088.6	gi|84489153|ref|YP_447385.1|	-	1.7e-35	121.9	3.9	1.7e-35	121.9	3.9	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4268)
DUF3873	PF12989.7	gi|84489153|ref|YP_447385.1|	-	0.12	12.8	0.1	1.7	9.1	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3873)
PuR_N	PF09182.10	gi|84489153|ref|YP_447385.1|	-	0.17	11.8	0.1	0.37	10.8	0.1	1.5	1	0	0	1	1	1	0	Bacterial	purine	repressor,	N-terminal
Pterin_bind	PF00809.22	gi|84489154|ref|YP_447386.1|	-	6.2e-13	49.0	0.0	1.3e-12	48.0	0.0	1.5	1	0	0	1	1	1	1	Pterin	binding	enzyme
DUF4346	PF14251.6	gi|84489154|ref|YP_447386.1|	-	3.9e-10	39.8	0.3	9e-10	38.6	0.3	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
DUF561	PF04481.12	gi|84489154|ref|YP_447386.1|	-	4.7e-05	22.7	0.5	0.00013	21.2	0.0	1.9	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
POR	PF01558.18	gi|84489155|ref|YP_447387.1|	-	4e-36	124.7	0.3	4.6e-36	124.5	0.3	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.27	gi|84489156|ref|YP_447388.1|	-	4.4e-16	57.9	17.4	4.7e-09	35.7	4.0	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84489156|ref|YP_447388.1|	-	7.2e-11	41.7	16.9	1.5e-05	24.9	5.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489156|ref|YP_447388.1|	-	2e-10	40.6	13.3	5.2e-10	39.3	13.4	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489156|ref|YP_447388.1|	-	2.6e-09	36.6	11.1	1.3e-05	25.0	1.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489156|ref|YP_447388.1|	-	7.7e-09	35.6	8.0	0.00014	21.9	0.9	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489156|ref|YP_447388.1|	-	6.5e-08	33.0	21.8	6.2e-06	26.7	12.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489156|ref|YP_447388.1|	-	1.8e-07	32.0	11.0	0.00057	20.8	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|84489156|ref|YP_447388.1|	-	9.3e-07	28.9	24.2	7.4e-05	22.8	14.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84489156|ref|YP_447388.1|	-	5.4e-05	23.7	12.7	0.00043	20.8	1.3	2.8	2	1	1	3	3	3	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|84489156|ref|YP_447388.1|	-	7.3e-05	23.0	16.5	0.0014	18.9	4.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84489156|ref|YP_447388.1|	-	0.0012	19.4	12.4	0.13	12.9	2.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489156|ref|YP_447388.1|	-	0.0017	18.7	14.4	0.028	14.9	2.3	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84489156|ref|YP_447388.1|	-	0.0046	17.6	17.2	0.44	11.3	4.4	3.2	2	2	1	3	3	3	3	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|84489156|ref|YP_447388.1|	-	0.01	16.6	12.6	0.78	10.6	3.9	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489156|ref|YP_447388.1|	-	0.08	13.9	18.7	0.64	11.1	5.0	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|84489156|ref|YP_447388.1|	-	0.44	10.8	8.3	1	9.6	8.3	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
POR_N	PF01855.19	gi|84489157|ref|YP_447389.1|	-	2e-72	243.7	0.5	2.5e-72	243.4	0.5	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|84489157|ref|YP_447389.1|	-	1.8e-30	105.2	0.2	4.8e-30	103.9	0.1	1.8	2	0	0	2	2	2	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|84489157|ref|YP_447389.1|	-	1.1e-06	28.5	0.8	3e-06	27.1	0.1	2.1	2	1	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.18	gi|84489157|ref|YP_447389.1|	-	0.008	15.8	0.3	0.014	15.0	0.3	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|84489158|ref|YP_447390.1|	-	1.4e-29	102.9	0.2	1.4e-29	102.9	0.2	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|84489158|ref|YP_447390.1|	-	0.033	13.4	0.8	0.16	11.2	0.3	2.0	1	1	1	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
Fumerase	PF05681.14	gi|84489159|ref|YP_447391.1|	-	5.7e-99	330.9	0.2	6.5e-99	330.7	0.2	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
PhoU	PF01895.19	gi|84489160|ref|YP_447392.1|	-	9.7e-31	106.1	9.1	7.7e-18	64.7	1.1	2.2	2	0	0	2	2	2	2	PhoU	domain
MHB	PF16525.5	gi|84489160|ref|YP_447392.1|	-	0.052	13.8	0.0	0.13	12.6	0.0	1.6	1	0	0	1	1	1	0	Haemophore,	haem-binding
Hydrolase_4	PF12146.8	gi|84489160|ref|YP_447392.1|	-	0.071	12.4	0.0	0.09	12.0	0.0	1.2	1	0	0	1	1	1	0	Serine	aminopeptidase,	S33
HD_assoc	PF13286.6	gi|84489160|ref|YP_447392.1|	-	0.076	13.6	0.7	0.4	11.3	0.1	2.1	2	0	0	2	2	2	0	Phosphohydrolase-associated	domain
GlutR_dimer	PF00745.20	gi|84489160|ref|YP_447392.1|	-	0.37	11.3	5.1	12	6.5	0.2	2.7	1	1	1	3	3	3	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
ABC_tran	PF00005.27	gi|84489161|ref|YP_447393.1|	-	6.4e-32	110.9	0.0	9e-32	110.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489161|ref|YP_447393.1|	-	8.7e-10	38.9	0.1	0.00028	20.8	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|84489161|ref|YP_447393.1|	-	5.6e-08	32.5	1.8	8.6e-07	28.6	1.8	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|84489161|ref|YP_447393.1|	-	1e-05	25.4	0.9	1.6e-05	24.8	0.6	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|84489161|ref|YP_447393.1|	-	5.4e-05	23.2	0.1	0.00012	22.0	0.0	1.7	2	0	0	2	2	2	1	RsgA	GTPase
AAA_22	PF13401.6	gi|84489161|ref|YP_447393.1|	-	0.00013	22.2	0.0	0.00022	21.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
G-alpha	PF00503.20	gi|84489161|ref|YP_447393.1|	-	0.00071	18.8	0.1	0.00091	18.5	0.1	1.1	1	0	0	1	1	1	1	G-protein	alpha	subunit
AAA_29	PF13555.6	gi|84489161|ref|YP_447393.1|	-	0.0011	18.6	0.0	0.0023	17.7	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|84489161|ref|YP_447393.1|	-	0.0023	18.3	0.0	0.0085	16.5	0.0	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|84489161|ref|YP_447393.1|	-	0.0048	16.8	0.0	0.012	15.5	0.0	1.7	2	0	0	2	2	1	1	Rad17	P-loop	domain
AAA_18	PF13238.6	gi|84489161|ref|YP_447393.1|	-	0.0051	17.3	0.0	0.012	16.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|84489161|ref|YP_447393.1|	-	0.0056	17.2	0.2	0.0056	17.2	0.2	2.1	2	1	0	2	2	2	1	AAA	domain
Adeno_IVa2	PF02456.15	gi|84489161|ref|YP_447393.1|	-	0.0069	15.2	0.0	0.044	12.6	0.0	1.9	2	0	0	2	2	2	1	Adenovirus	IVa2	protein
AAA_25	PF13481.6	gi|84489161|ref|YP_447393.1|	-	0.013	15.1	0.0	0.044	13.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|84489161|ref|YP_447393.1|	-	0.018	15.2	0.0	0.03	14.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|84489161|ref|YP_447393.1|	-	0.022	14.5	0.7	0.04	13.6	0.1	1.9	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|84489161|ref|YP_447393.1|	-	0.023	15.1	0.1	0.19	12.2	0.1	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_PrkA	PF08298.11	gi|84489161|ref|YP_447393.1|	-	0.044	12.7	0.0	0.57	9.0	0.0	2.0	1	1	0	2	2	2	0	PrkA	AAA	domain
AAA_30	PF13604.6	gi|84489161|ref|YP_447393.1|	-	0.048	13.4	0.0	0.38	10.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
ATPase_2	PF01637.18	gi|84489161|ref|YP_447393.1|	-	0.072	13.0	1.9	0.28	11.0	1.8	2.1	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_28	PF13521.6	gi|84489161|ref|YP_447393.1|	-	0.078	13.2	0.0	0.19	12.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|84489161|ref|YP_447393.1|	-	0.087	13.2	0.0	0.3	11.5	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
NACHT	PF05729.12	gi|84489161|ref|YP_447393.1|	-	0.11	12.5	0.0	0.21	11.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_5	PF07728.14	gi|84489161|ref|YP_447393.1|	-	0.13	12.3	0.0	0.4	10.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
BPD_transp_1	PF00528.22	gi|84489162|ref|YP_447394.1|	-	1.7e-27	96.4	12.9	1.7e-27	96.4	12.9	2.3	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|84489163|ref|YP_447395.1|	-	1.1e-23	84.0	23.3	1.1e-23	84.0	23.3	2.2	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
UNC-50	PF05216.13	gi|84489163|ref|YP_447395.1|	-	0.00019	21.1	1.1	0.00019	21.1	1.1	2.1	2	1	0	2	2	2	1	UNC-50	family
Fig1	PF12351.8	gi|84489163|ref|YP_447395.1|	-	4.3	7.2	12.4	0.1	12.5	1.9	2.8	3	0	0	3	3	3	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
PBP_like_2	PF12849.7	gi|84489164|ref|YP_447396.1|	-	2.5e-36	125.8	8.4	4.8e-36	124.9	8.4	1.4	1	1	0	1	1	1	1	PBP	superfamily	domain
PBP_like	PF12727.7	gi|84489164|ref|YP_447396.1|	-	1.4e-16	60.2	0.1	1.8e-16	59.8	0.1	1.1	1	0	0	1	1	1	1	PBP	superfamily	domain
SBP_bac_11	PF13531.6	gi|84489164|ref|YP_447396.1|	-	9e-09	35.4	0.1	1.3e-08	34.9	0.1	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.6	gi|84489164|ref|YP_447396.1|	-	0.00038	20.4	2.1	0.0022	17.9	0.0	2.1	1	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.6	gi|84489164|ref|YP_447396.1|	-	0.0032	16.9	0.0	0.0068	15.8	0.0	1.8	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
Lipoprotein_10	PF03202.13	gi|84489164|ref|YP_447396.1|	-	0.011	16.2	1.6	0.18	12.3	0.0	2.8	3	0	0	3	3	3	0	Putative	mycoplasma	lipoprotein,	C-terminal	region
ZoocinA_TRD	PF16775.5	gi|84489164|ref|YP_447396.1|	-	0.045	13.9	0.8	2.3	8.4	0.0	2.6	2	0	0	2	2	2	0	Target	recognition	domain	of	lytic	exoenzyme
PhoU	PF01895.19	gi|84489165|ref|YP_447397.1|	-	2.9e-24	85.3	8.6	7.6e-12	45.5	1.7	2.8	3	0	0	3	3	3	2	PhoU	domain
HTH_24	PF13412.6	gi|84489165|ref|YP_447397.1|	-	1.1e-08	34.5	0.8	2.1e-08	33.6	0.8	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|84489165|ref|YP_447397.1|	-	6.8e-05	22.7	0.1	0.00019	21.3	0.1	1.7	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.17	gi|84489165|ref|YP_447397.1|	-	0.00014	21.7	0.4	0.00014	21.7	0.4	2.7	3	1	0	3	3	3	1	TFIIE	alpha	subunit
HTH_Crp_2	PF13545.6	gi|84489165|ref|YP_447397.1|	-	0.00039	20.4	0.0	0.0008	19.3	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|84489165|ref|YP_447397.1|	-	0.00088	19.1	0.1	0.0022	17.8	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.20	gi|84489165|ref|YP_447397.1|	-	0.0014	18.9	0.2	0.0068	16.7	0.1	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.12	gi|84489165|ref|YP_447397.1|	-	0.0015	18.4	0.1	0.0039	17.1	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
MarR_2	PF12802.7	gi|84489165|ref|YP_447397.1|	-	0.0025	17.7	0.0	0.0047	16.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
Sigma70_r4	PF04545.16	gi|84489165|ref|YP_447397.1|	-	0.0027	17.2	0.0	0.0076	15.7	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
Phage_rep_O	PF04492.13	gi|84489165|ref|YP_447397.1|	-	0.011	16.3	0.7	0.28	11.8	0.0	2.6	2	1	0	2	2	2	0	Bacteriophage	replication	protein	O
HTH_3	PF01381.22	gi|84489165|ref|YP_447397.1|	-	0.018	15.1	0.1	0.062	13.4	0.1	2.0	1	0	0	1	1	1	0	Helix-turn-helix
HTH_23	PF13384.6	gi|84489165|ref|YP_447397.1|	-	0.022	14.6	0.0	0.051	13.4	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
Arg_repressor	PF01316.21	gi|84489165|ref|YP_447397.1|	-	0.06	13.1	1.6	1.5	8.7	0.1	2.9	3	0	0	3	3	3	0	Arginine	repressor,	DNA	binding	domain
HTH_28	PF13518.6	gi|84489165|ref|YP_447397.1|	-	0.12	12.5	0.0	0.23	11.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
UPF0029	PF01205.19	gi|84489166|ref|YP_447398.1|	-	2.6e-21	75.9	0.1	3e-21	75.7	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0029
Bap31	PF05529.12	gi|84489167|ref|YP_447399.1|	-	0.034	14.0	1.6	0.067	13.0	0.2	2.3	2	0	0	2	2	2	0	Bap31/Bap29	transmembrane	region
TMEM154	PF15102.6	gi|84489167|ref|YP_447399.1|	-	0.057	13.3	1.7	0.094	12.6	0.0	2.2	2	0	0	2	2	2	0	TMEM154	protein	family
Pex24p	PF06398.11	gi|84489167|ref|YP_447399.1|	-	0.19	10.7	6.0	0.11	11.5	1.0	2.1	1	1	1	2	2	2	0	Integral	peroxisomal	membrane	peroxin
DUF3185	PF11381.8	gi|84489167|ref|YP_447399.1|	-	0.51	10.4	13.0	0.15	12.1	1.3	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3185)
Neurensin	PF14927.6	gi|84489167|ref|YP_447399.1|	-	10	5.9	9.9	7.1	6.3	4.8	3.2	1	1	1	2	2	2	0	Neurensin
MutS_V	PF00488.21	gi|84489168|ref|YP_447400.1|	-	3.1e-09	37.1	0.4	7.8e-09	35.8	0.4	1.6	1	0	0	1	1	1	1	MutS	domain	V
AAA_14	PF13173.6	gi|84489168|ref|YP_447400.1|	-	2.4e-07	30.8	0.1	2.4e-07	30.8	0.1	3.4	3	1	0	3	3	3	1	AAA	domain
HHH_5	PF14520.6	gi|84489168|ref|YP_447400.1|	-	1.2e-05	25.8	0.0	4.5e-05	24.0	0.0	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_28	PF13521.6	gi|84489168|ref|YP_447400.1|	-	0.00052	20.3	0.3	0.0013	19.0	0.3	1.6	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|84489168|ref|YP_447400.1|	-	0.0021	18.5	2.4	0.013	15.9	0.3	2.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|84489168|ref|YP_447400.1|	-	0.017	15.7	1.1	0.017	15.7	1.1	3.9	3	1	1	4	4	3	0	AAA	domain
GBP	PF02263.19	gi|84489168|ref|YP_447400.1|	-	0.023	14.0	1.9	0.064	12.5	1.9	1.8	1	0	0	1	1	1	0	Guanylate-binding	protein,	N-terminal	domain
T2SSE	PF00437.20	gi|84489168|ref|YP_447400.1|	-	0.073	12.1	0.0	0.2	10.7	0.0	1.7	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Dynamin_N	PF00350.23	gi|84489168|ref|YP_447400.1|	-	0.1	12.7	3.5	0.22	11.6	0.0	2.9	3	0	0	3	3	3	0	Dynamin	family
HHH	PF00633.23	gi|84489168|ref|YP_447400.1|	-	0.12	12.3	0.0	3.9	7.5	0.0	2.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
AAA_29	PF13555.6	gi|84489168|ref|YP_447400.1|	-	0.12	12.2	0.0	0.25	11.1	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
CPT	PF07931.12	gi|84489168|ref|YP_447400.1|	-	0.13	12.1	0.0	0.24	11.2	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_21	PF13304.6	gi|84489168|ref|YP_447400.1|	-	0.16	11.7	0.1	0.16	11.7	0.1	3.2	3	1	1	4	4	4	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
NTPase_1	PF03266.15	gi|84489168|ref|YP_447400.1|	-	0.18	11.7	1.9	7.4	6.4	0.2	2.6	2	0	0	2	2	2	0	NTPase
AAA_16	PF13191.6	gi|84489168|ref|YP_447400.1|	-	0.2	12.0	0.0	1	9.7	0.0	2.0	1	1	1	2	2	2	0	AAA	ATPase	domain
ABC_tran	PF00005.27	gi|84489168|ref|YP_447400.1|	-	0.34	11.4	0.0	0.34	11.4	0.0	2.4	3	1	0	3	3	2	0	ABC	transporter
TauE	PF01925.19	gi|84489169|ref|YP_447401.1|	-	2.7e-44	151.6	28.1	3.3e-44	151.3	28.1	1.1	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
GtrA	PF04138.14	gi|84489169|ref|YP_447401.1|	-	4.7	7.5	16.4	0.088	13.0	1.5	3.0	2	1	0	2	2	2	0	GtrA-like	protein
Peptidase_U32	PF01136.19	gi|84489170|ref|YP_447402.1|	-	3.3e-79	265.3	0.1	1.4e-71	240.4	0.1	2.7	2	1	0	2	2	2	2	Peptidase	family	U32
DUF3656	PF12392.8	gi|84489170|ref|YP_447402.1|	-	2.5e-21	76.3	1.1	6e-21	75.1	1.1	1.7	1	0	0	1	1	1	1	Collagenase
DUF2408	PF10303.9	gi|84489170|ref|YP_447402.1|	-	0.0083	16.7	2.0	0.022	15.3	2.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2408)
GHL6	PF14871.6	gi|84489170|ref|YP_447402.1|	-	0.096	12.8	0.8	0.31	11.2	0.0	2.2	2	0	0	2	2	2	0	Hypothetical	glycosyl	hydrolase	6
A2M_recep	PF07677.14	gi|84489170|ref|YP_447402.1|	-	7.3	7.4	8.5	89	3.9	0.2	4.8	3	1	1	4	4	4	0	A-macroglobulin	receptor	binding	domain
Thymidylate_kin	PF02223.17	gi|84489171|ref|YP_447403.1|	-	1.2e-47	162.0	1.0	1.4e-47	161.8	1.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.6	gi|84489171|ref|YP_447403.1|	-	4.7e-06	27.0	0.0	6.3e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|84489171|ref|YP_447403.1|	-	5e-06	27.0	0.4	2.2e-05	24.9	0.1	2.0	1	1	1	2	2	2	1	AAA	domain
dNK	PF01712.19	gi|84489171|ref|YP_447403.1|	-	4.3e-05	23.5	4.4	0.00027	20.9	4.4	2.1	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|84489171|ref|YP_447403.1|	-	0.00013	22.5	0.4	0.0005	20.6	0.2	1.9	1	1	1	2	2	2	1	AAA	domain
SRP54	PF00448.22	gi|84489171|ref|YP_447403.1|	-	0.00047	19.8	0.1	0.002	17.8	0.0	2.0	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.6	gi|84489171|ref|YP_447403.1|	-	0.0033	17.7	0.2	0.005	17.1	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
PPK2	PF03976.14	gi|84489171|ref|YP_447403.1|	-	0.013	15.1	0.2	0.043	13.3	0.0	1.9	3	0	0	3	3	3	0	Polyphosphate	kinase	2	(PPK2)
MobB	PF03205.14	gi|84489171|ref|YP_447403.1|	-	0.013	15.3	0.0	0.035	14.0	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.15	gi|84489171|ref|YP_447403.1|	-	0.014	15.3	1.1	0.023	14.6	0.1	1.9	2	1	0	2	2	2	0	NTPase
AAA_31	PF13614.6	gi|84489171|ref|YP_447403.1|	-	0.021	14.7	3.3	0.25	11.2	3.3	2.1	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.17	gi|84489171|ref|YP_447403.1|	-	0.031	14.0	0.2	0.071	12.9	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Ish1	PF10281.9	gi|84489171|ref|YP_447403.1|	-	0.038	14.3	1.5	0.62	10.4	0.3	2.9	2	1	0	2	2	2	0	Putative	stress-responsive	nuclear	envelope	protein
MeaB	PF03308.16	gi|84489171|ref|YP_447403.1|	-	0.043	12.8	0.0	0.065	12.2	0.0	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_30	PF13604.6	gi|84489171|ref|YP_447403.1|	-	0.056	13.1	0.0	0.079	12.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|84489171|ref|YP_447403.1|	-	0.061	13.3	0.3	0.22	11.5	0.1	1.9	1	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Cytochrome-c551	PF10643.9	gi|84489171|ref|YP_447403.1|	-	0.094	12.3	0.2	0.1	12.2	0.2	1.4	1	1	0	1	1	1	0	Photosystem	P840	reaction-centre	cytochrome	c-551
AAA_3	PF07726.11	gi|84489171|ref|YP_447403.1|	-	0.11	12.4	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|84489171|ref|YP_447403.1|	-	0.11	12.8	0.0	0.15	12.4	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
tRNA-synt_1b	PF00579.25	gi|84489173|ref|YP_447405.1|	-	1.3e-47	162.5	0.1	1.5e-47	162.3	0.1	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.18	gi|84489173|ref|YP_447405.1|	-	1.8e-05	23.8	0.0	0.024	13.5	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
NMD3	PF04981.13	gi|84489174|ref|YP_447406.1|	-	2.6e-50	171.1	2.8	3.4e-50	170.8	2.8	1.1	1	0	0	1	1	1	1	NMD3	family
zf-C4pol	PF14260.6	gi|84489174|ref|YP_447406.1|	-	0.25	11.8	3.8	41	4.7	2.8	3.0	2	1	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DZR	PF12773.7	gi|84489174|ref|YP_447406.1|	-	2.1	8.4	5.2	5.2	7.2	3.0	2.5	2	1	1	3	3	3	0	Double	zinc	ribbon
eIF-5_eIF-2B	PF01873.17	gi|84489175|ref|YP_447407.1|	-	2.8e-37	127.2	0.0	3.4e-37	126.9	0.0	1.1	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
zinc_ribbon_12	PF11331.8	gi|84489175|ref|YP_447407.1|	-	0.032	14.0	1.9	0.088	12.6	0.6	2.1	2	1	0	2	2	2	0	Probable	zinc-ribbon	domain
Elf1	PF05129.13	gi|84489175|ref|YP_447407.1|	-	0.038	14.0	0.2	0.066	13.3	0.2	1.4	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DNA_RNApol_7kD	PF03604.13	gi|84489175|ref|YP_447407.1|	-	0.53	10.0	2.7	1.2	8.9	2.7	1.6	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
MCM	PF00493.23	gi|84489176|ref|YP_447408.1|	-	2.4e-98	327.7	0.0	3.5e-98	327.2	0.0	1.3	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_OB	PF17207.3	gi|84489176|ref|YP_447408.1|	-	8.7e-34	116.1	0.2	2.2e-33	114.8	0.2	1.6	1	0	0	1	1	1	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|84489176|ref|YP_447408.1|	-	5.3e-29	100.5	2.9	7.3e-29	100.0	1.5	2.0	2	0	0	2	2	1	1	MCM	AAA-lid	domain
Mg_chelatase	PF01078.21	gi|84489176|ref|YP_447408.1|	-	6.1e-08	32.3	0.0	0.00022	20.7	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|84489176|ref|YP_447408.1|	-	0.00051	20.0	0.1	0.0035	17.3	0.0	2.5	3	1	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|84489176|ref|YP_447408.1|	-	0.00075	19.9	0.2	0.0026	18.2	0.1	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|84489176|ref|YP_447408.1|	-	0.0026	17.5	0.1	2.7	7.7	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Zn-ribbon_8	PF09723.10	gi|84489176|ref|YP_447408.1|	-	0.0033	17.5	1.4	0.0033	17.5	1.4	2.0	2	0	0	2	2	1	1	Zinc	ribbon	domain
MCM_N	PF14551.6	gi|84489176|ref|YP_447408.1|	-	0.0038	17.8	0.1	0.03	14.9	0.0	2.6	3	0	0	3	3	1	1	MCM	N-terminal	domain
AAA_3	PF07726.11	gi|84489176|ref|YP_447408.1|	-	0.004	17.0	0.0	0.053	13.4	0.0	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HypA	PF01155.19	gi|84489176|ref|YP_447408.1|	-	0.014	15.4	0.0	0.032	14.3	0.0	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
GntR	PF00392.21	gi|84489176|ref|YP_447408.1|	-	0.017	14.8	0.0	0.09	12.4	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
AAA_18	PF13238.6	gi|84489176|ref|YP_447408.1|	-	0.031	14.8	0.0	0.15	12.6	0.0	2.2	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|84489176|ref|YP_447408.1|	-	0.045	14.0	0.1	0.19	12.0	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
DUF3987	PF13148.6	gi|84489176|ref|YP_447408.1|	-	0.05	12.6	0.1	4.4	6.2	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3987)
AAA	PF00004.29	gi|84489176|ref|YP_447408.1|	-	0.051	14.0	0.1	0.63	10.5	0.0	3.0	3	1	0	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RPA_C	PF08784.11	gi|84489176|ref|YP_447408.1|	-	0.055	14.1	0.0	0.13	13.0	0.0	1.6	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
tRNA_anti-codon	PF01336.25	gi|84489176|ref|YP_447408.1|	-	0.069	13.1	0.4	0.35	10.9	0.0	2.4	3	0	0	3	3	2	0	OB-fold	nucleic	acid	binding	domain
DUF4072	PF13284.6	gi|84489176|ref|YP_447408.1|	-	0.15	12.5	0.7	0.37	11.3	0.7	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4072)
AAA_7	PF12775.7	gi|84489176|ref|YP_447408.1|	-	0.17	11.4	0.0	0.36	10.3	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ABC_tran	PF00005.27	gi|84489176|ref|YP_447408.1|	-	0.21	12.1	2.2	1.9	9.0	0.3	3.1	3	1	1	4	4	4	0	ABC	transporter
AAA_30	PF13604.6	gi|84489176|ref|YP_447408.1|	-	0.24	11.1	1.0	2.9	7.6	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
SLATT_1	PF18181.1	gi|84489177|ref|YP_447409.1|	-	0.0001	22.2	0.6	0.00058	19.8	0.1	1.9	1	1	1	2	2	2	1	SMODS	and	SLOG-associating	2TM	effector	domain	1
LPP	PF04728.13	gi|84489177|ref|YP_447409.1|	-	0.0021	18.4	6.2	1.3	9.5	1.8	3.1	2	1	0	2	2	2	2	Lipoprotein	leucine-zipper
NPV_P10	PF05531.12	gi|84489177|ref|YP_447409.1|	-	0.0022	18.4	1.0	0.015	15.8	0.9	2.2	1	1	0	1	1	1	1	Nucleopolyhedrovirus	P10	protein
Serendipity_A	PF05482.12	gi|84489177|ref|YP_447409.1|	-	0.0031	16.2	1.3	0.0037	16.0	1.3	1.0	1	0	0	1	1	1	1	Serendipity	locus	alpha	protein	(SRY-A)
Syntaxin-6_N	PF09177.11	gi|84489177|ref|YP_447409.1|	-	0.0076	16.8	2.5	0.012	16.2	2.5	1.3	1	0	0	1	1	1	1	Syntaxin	6,	N-terminal
T4SS	PF07996.11	gi|84489177|ref|YP_447409.1|	-	0.021	15.3	5.1	0.053	13.9	5.1	1.6	1	1	0	1	1	1	0	Type	IV	secretion	system	proteins
Halogen_Hydrol	PF10112.9	gi|84489177|ref|YP_447409.1|	-	0.025	14.6	0.0	0.73	9.8	0.0	2.1	1	1	1	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
JAKMIP_CC3	PF16034.5	gi|84489177|ref|YP_447409.1|	-	0.032	14.2	1.9	0.06	13.3	1.9	1.5	1	1	0	1	1	1	0	JAKMIP	CC3	domain
Cep57_MT_bd	PF06657.13	gi|84489177|ref|YP_447409.1|	-	0.062	13.8	0.6	0.9	10.0	0.2	2.4	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Uds1	PF15456.6	gi|84489177|ref|YP_447409.1|	-	0.082	13.1	1.3	0.1	12.8	1.3	1.1	1	0	0	1	1	1	0	Up-regulated	During	Septation
DUF5344	PF17279.2	gi|84489177|ref|YP_447409.1|	-	0.083	13.5	10.4	0.33	11.6	1.3	2.2	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5344)
TarH	PF02203.15	gi|84489177|ref|YP_447409.1|	-	0.16	11.8	4.6	0.99	9.3	2.2	2.2	1	1	1	2	2	2	0	Tar	ligand	binding	domain	homologue
Seryl_tRNA_N	PF02403.22	gi|84489177|ref|YP_447409.1|	-	0.22	11.8	6.7	6.8	7.0	4.4	2.2	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
YabA	PF06156.13	gi|84489177|ref|YP_447409.1|	-	0.31	11.7	2.6	0.55	10.9	2.6	1.5	1	1	0	1	1	1	0	Initiation	control	protein	YabA
RSS_P20	PF11757.8	gi|84489177|ref|YP_447409.1|	-	1.2	9.6	6.5	1.7	9.1	5.9	1.6	1	1	0	1	1	1	0	Suppressor	of	RNA	silencing	P21-like	N-terminal	domain
Neur_chan_memb	PF02932.16	gi|84489177|ref|YP_447409.1|	-	2.5	8.1	4.7	7.9	6.5	4.7	1.7	1	1	0	1	1	1	0	Neurotransmitter-gated	ion-channel	transmembrane	region
Prominin	PF05478.11	gi|84489177|ref|YP_447409.1|	-	2.8	5.8	9.5	0.33	8.8	5.4	1.5	1	1	1	2	2	2	0	Prominin
LapA_dom	PF06305.11	gi|84489177|ref|YP_447409.1|	-	7.2	6.5	7.1	13	5.7	3.0	2.8	3	1	0	3	3	3	0	Lipopolysaccharide	assembly	protein	A	domain
FtsJ	PF01728.19	gi|84489178|ref|YP_447410.1|	-	1.1e-54	185.2	0.0	1.3e-54	185.0	0.0	1.1	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|84489178|ref|YP_447410.1|	-	1.4e-05	24.9	0.5	0.00028	20.7	0.5	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Myb_DNA-bind_3	PF12776.7	gi|84489178|ref|YP_447410.1|	-	0.0048	17.9	1.9	1.7	9.7	0.1	2.4	2	0	0	2	2	2	2	Myb/SANT-like	DNA-binding	domain
Methyltrans_Mon	PF14314.6	gi|84489178|ref|YP_447410.1|	-	0.044	11.8	0.0	0.061	11.4	0.0	1.2	1	0	0	1	1	1	0	Virus-capping	methyltransferase
PCMT	PF01135.19	gi|84489178|ref|YP_447410.1|	-	0.065	13.0	0.1	0.14	11.9	0.0	1.5	2	0	0	2	2	2	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
AAA_6	PF12774.7	gi|84489178|ref|YP_447410.1|	-	0.068	12.1	0.0	0.11	11.5	0.0	1.4	1	0	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
Methyltransf_25	PF13649.6	gi|84489178|ref|YP_447410.1|	-	0.072	13.8	0.0	0.19	12.4	0.0	1.8	1	1	1	2	2	2	0	Methyltransferase	domain
MTS	PF05175.14	gi|84489178|ref|YP_447410.1|	-	0.088	12.4	0.2	0.21	11.2	0.2	1.6	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_23	PF13489.6	gi|84489178|ref|YP_447410.1|	-	0.14	12.0	0.0	0.26	11.1	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
Metallophos_2	PF12850.7	gi|84489179|ref|YP_447411.1|	-	7.1e-35	120.6	0.0	8.5e-35	120.4	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|84489179|ref|YP_447411.1|	-	8.1e-07	29.7	0.4	0.016	15.7	0.0	2.2	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
Topoisom_bac	PF01131.20	gi|84489180|ref|YP_447412.1|	-	4.8e-115	384.9	9.8	6.1e-115	384.5	9.8	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.19	gi|84489180|ref|YP_447412.1|	-	9.2e-26	89.3	18.9	3.8e-16	58.6	1.3	3.5	3	0	0	3	3	3	2	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim	PF01751.22	gi|84489180|ref|YP_447412.1|	-	4e-15	55.9	0.1	4e-15	55.9	0.1	2.6	3	0	0	3	3	3	1	Toprim	domain
DUF1272	PF06906.11	gi|84489180|ref|YP_447412.1|	-	0.0054	16.8	1.8	0.013	15.5	1.8	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
Auto_anti-p27	PF06677.12	gi|84489180|ref|YP_447412.1|	-	0.055	13.6	1.8	0.11	12.7	0.2	2.1	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn-ribbon_8	PF09723.10	gi|84489180|ref|YP_447412.1|	-	0.42	10.8	2.0	4.2	7.6	0.1	2.8	2	0	0	2	2	2	0	Zinc	ribbon	domain
DZR	PF12773.7	gi|84489180|ref|YP_447412.1|	-	1	9.5	3.7	2.5	8.2	3.7	1.7	1	0	0	1	1	1	0	Double	zinc	ribbon
DEAD	PF00270.29	gi|84489181|ref|YP_447413.1|	-	7.2e-28	97.5	0.0	4.3e-27	95.0	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DUF1998	PF09369.10	gi|84489181|ref|YP_447413.1|	-	1.1e-19	70.9	0.1	4.3e-19	69.1	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.31	gi|84489181|ref|YP_447413.1|	-	4.7e-13	49.5	0.2	7.3e-12	45.6	0.0	2.8	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|84489181|ref|YP_447413.1|	-	7.9e-11	42.3	0.1	2.7e-10	40.5	0.1	1.9	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Terminase_6	PF03237.15	gi|84489181|ref|YP_447413.1|	-	0.11	12.1	0.0	0.35	10.5	0.0	1.9	1	1	0	1	1	1	0	Terminase-like	family
STT3	PF02516.14	gi|84489182|ref|YP_447414.1|	-	8.2e-83	279.0	18.9	3.4e-81	273.6	18.8	2.3	1	1	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
DUF937	PF06078.11	gi|84489182|ref|YP_447414.1|	-	0.027	15.1	0.1	0.072	13.7	0.1	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF937)
Connexin	PF00029.19	gi|84489182|ref|YP_447414.1|	-	0.055	13.2	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Connexin
OppC_N	PF12911.7	gi|84489182|ref|YP_447414.1|	-	1.2	9.1	6.5	43	4.2	0.1	4.1	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Rad51	PF08423.11	gi|84489183|ref|YP_447415.1|	-	2e-31	109.2	0.1	2.5e-31	108.9	0.1	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|84489183|ref|YP_447415.1|	-	1.4e-19	70.6	0.1	1.9e-19	70.2	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
ATPase	PF06745.13	gi|84489183|ref|YP_447415.1|	-	1.2e-11	44.5	0.5	1.5e-11	44.1	0.5	1.2	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|84489183|ref|YP_447415.1|	-	2e-10	40.6	0.0	3.3e-10	39.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|84489183|ref|YP_447415.1|	-	7.9e-08	32.3	0.1	1.8e-07	31.1	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
Zot	PF05707.12	gi|84489183|ref|YP_447415.1|	-	5.5e-07	29.4	0.0	7.8e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA	PF00004.29	gi|84489183|ref|YP_447415.1|	-	6.8e-06	26.5	0.0	1.2e-05	25.8	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DnaB_C	PF03796.15	gi|84489183|ref|YP_447415.1|	-	6.2e-05	22.4	1.3	0.1	11.9	1.0	2.1	1	1	1	2	2	2	2	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.9	gi|84489183|ref|YP_447415.1|	-	0.00013	21.3	0.0	0.00017	21.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.6	gi|84489183|ref|YP_447415.1|	-	0.00053	20.3	0.0	0.0011	19.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|84489183|ref|YP_447415.1|	-	0.001	18.1	0.0	0.0028	16.6	0.0	1.6	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
IstB_IS21	PF01695.17	gi|84489183|ref|YP_447415.1|	-	0.0023	17.7	0.2	0.017	14.9	0.0	2.3	1	1	0	2	2	2	1	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|84489183|ref|YP_447415.1|	-	0.0025	17.8	0.1	0.0041	17.1	0.1	1.4	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|84489183|ref|YP_447415.1|	-	0.0087	16.5	0.0	0.014	15.8	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_31	PF13614.6	gi|84489183|ref|YP_447415.1|	-	0.024	14.5	0.1	0.043	13.7	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|84489183|ref|YP_447415.1|	-	0.034	13.9	0.0	0.062	13.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|84489183|ref|YP_447415.1|	-	0.036	14.6	0.1	0.083	13.4	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|84489183|ref|YP_447415.1|	-	0.048	14.2	0.0	0.071	13.6	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA_7	PF12775.7	gi|84489183|ref|YP_447415.1|	-	0.05	13.1	0.0	0.083	12.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
cobW	PF02492.19	gi|84489183|ref|YP_447415.1|	-	0.26	10.8	1.0	2.4	7.7	0.0	2.6	3	0	0	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
Aminotran_1_2	PF00155.21	gi|84489184|ref|YP_447416.1|	-	1.6e-39	136.1	0.0	2.1e-39	135.7	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|84489184|ref|YP_447416.1|	-	2.2e-06	26.9	0.0	0.011	14.7	0.0	2.1	2	0	0	2	2	2	2	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|84489184|ref|YP_447416.1|	-	0.001	18.5	0.0	0.0015	17.8	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Alliinase_C	PF04864.13	gi|84489184|ref|YP_447416.1|	-	0.016	14.1	0.0	0.09	11.6	0.0	2.0	2	0	0	2	2	2	0	Allinase
Cys_Met_Meta_PP	PF01053.20	gi|84489184|ref|YP_447416.1|	-	0.052	12.1	0.1	0.076	11.5	0.1	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
EpsG	PF14897.6	gi|84489184|ref|YP_447416.1|	-	0.17	11.2	0.1	0.27	10.5	0.1	1.2	1	0	0	1	1	1	0	EpsG	family
PRC	PF05239.16	gi|84489185|ref|YP_447417.1|	-	1.9e-10	40.7	0.7	2.5e-10	40.3	0.7	1.2	1	0	0	1	1	1	1	PRC-barrel	domain
Radical_SAM_C	PF16199.5	gi|84489186|ref|YP_447418.1|	-	2.7e-26	91.4	0.1	5.3e-26	90.5	0.1	1.5	1	0	0	1	1	1	1	Radical_SAM	C-terminal	domain
Radical_SAM	PF04055.21	gi|84489186|ref|YP_447418.1|	-	4.6e-18	66.1	0.1	1.1e-17	64.9	0.1	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.25	gi|84489186|ref|YP_447418.1|	-	6.4e-06	26.4	0.0	1.8e-05	25.0	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|84489186|ref|YP_447418.1|	-	8.9e-05	22.4	0.1	0.00017	21.5	0.1	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|84489186|ref|YP_447418.1|	-	0.032	14.6	0.4	0.071	13.5	0.4	1.6	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
GHMP_kinases_C	PF08544.13	gi|84489187|ref|YP_447419.1|	-	6.1e-07	29.7	0.0	1.1e-06	28.9	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|84489187|ref|YP_447419.1|	-	0.032	14.5	0.0	0.066	13.4	0.0	1.6	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
Aconitase_C	PF00694.19	gi|84489188|ref|YP_447420.1|	-	1.5e-19	70.6	1.0	5.1e-19	68.9	0.2	2.0	2	1	1	3	3	3	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|84489188|ref|YP_447420.1|	-	0.0051	16.5	1.1	0.0098	15.5	1.1	1.5	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
pXO2-34	PF17362.2	gi|84489188|ref|YP_447420.1|	-	0.096	12.6	0.1	0.73	9.7	0.0	2.1	1	1	1	2	2	2	0	Family	of	unknown	function
PmrD	PF11183.8	gi|84489188|ref|YP_447420.1|	-	0.18	11.9	0.0	0.28	11.3	0.0	1.3	1	0	0	1	1	1	0	Polymyxin	resistance	protein	PmrD
PHD_4	PF16866.5	gi|84489189|ref|YP_447421.1|	-	0.0093	16.0	3.6	0.0095	16.0	0.9	2.0	2	0	0	2	2	2	1	PHD-finger
Lar_restr_allev	PF14354.6	gi|84489189|ref|YP_447421.1|	-	0.018	15.4	2.0	0.019	15.3	0.8	1.7	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
PHD	PF00628.29	gi|84489189|ref|YP_447421.1|	-	0.039	13.9	1.6	0.039	13.9	1.6	1.8	2	1	0	2	2	2	0	PHD-finger
ADK_lid	PF05191.14	gi|84489189|ref|YP_447421.1|	-	0.055	13.5	2.0	1.3	9.0	0.1	2.5	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Zn_Tnp_IS1595	PF12760.7	gi|84489189|ref|YP_447421.1|	-	0.081	12.9	0.5	0.4	10.7	0.1	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-CSL	PF05207.13	gi|84489189|ref|YP_447421.1|	-	0.094	12.5	0.7	0.25	11.1	0.7	1.7	1	0	0	1	1	1	0	CSL	zinc	finger
DUF35_N	PF12172.8	gi|84489189|ref|YP_447421.1|	-	0.14	12.0	0.6	16	5.5	0.0	2.3	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.11	gi|84489189|ref|YP_447421.1|	-	0.16	12.0	2.3	0.15	12.0	0.6	1.9	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C2H2_3	PF13878.6	gi|84489189|ref|YP_447421.1|	-	0.16	11.8	3.4	0.22	11.4	0.0	2.6	3	0	0	3	3	3	0	zinc-finger	of	acetyl-transferase	ESCO
zf-NADH-PPase	PF09297.11	gi|84489189|ref|YP_447421.1|	-	0.3	10.8	1.9	4.6	7.0	0.2	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RRN7	PF11781.8	gi|84489189|ref|YP_447421.1|	-	0.37	10.5	3.9	1	9.1	0.0	2.5	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
DUF2387	PF09526.10	gi|84489189|ref|YP_447421.1|	-	0.37	11.0	2.0	0.36	11.0	0.5	1.8	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
eIF-5_eIF-2B	PF01873.17	gi|84489189|ref|YP_447421.1|	-	0.37	10.7	4.5	0.14	12.1	0.8	2.2	3	0	0	3	3	2	0	Domain	found	in	IF2B/IF5
Rubredoxin	PF00301.20	gi|84489189|ref|YP_447421.1|	-	1.2	9.3	4.7	1.5	8.9	0.0	2.5	3	0	0	3	3	2	0	Rubredoxin
DNA_RNApol_7kD	PF03604.13	gi|84489189|ref|YP_447421.1|	-	5.6	6.7	6.7	7.6	6.3	0.2	2.8	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ACC	PF17848.1	gi|84489189|ref|YP_447421.1|	-	7.4	6.8	9.3	6.3	7.0	0.1	3.6	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
UPF0004	PF00919.20	gi|84489190|ref|YP_447422.1|	-	3.8e-23	81.4	0.1	9.6e-23	80.1	0.1	1.7	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Radical_SAM	PF04055.21	gi|84489190|ref|YP_447422.1|	-	3e-22	79.8	0.6	6e-22	78.8	0.3	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
TRAM	PF01938.20	gi|84489190|ref|YP_447422.1|	-	1.6e-09	37.6	0.2	3.4e-09	36.5	0.2	1.6	1	0	0	1	1	1	1	TRAM	domain
B12-binding	PF02310.19	gi|84489190|ref|YP_447422.1|	-	0.0073	16.3	0.0	0.53	10.3	0.0	2.9	2	1	0	2	2	2	1	B12	binding	domain
HMGL-like	PF00682.19	gi|84489190|ref|YP_447422.1|	-	0.11	12.1	0.1	2.2	7.7	0.0	2.2	2	0	0	2	2	2	0	HMGL-like
Snf7	PF03357.21	gi|84489190|ref|YP_447422.1|	-	6.5	6.3	7.1	0.58	9.7	0.2	2.7	2	1	1	3	3	3	0	Snf7
DZR	PF12773.7	gi|84489191|ref|YP_447423.1|	-	0.00045	20.2	4.9	0.0029	17.6	5.3	1.9	1	1	0	1	1	1	1	Double	zinc	ribbon
ADK_lid	PF05191.14	gi|84489191|ref|YP_447423.1|	-	0.0054	16.7	8.0	0.0057	16.6	1.5	2.4	2	1	0	2	2	2	1	Adenylate	kinase,	active	site	lid
Cytochrom_c3_2	PF14537.6	gi|84489191|ref|YP_447423.1|	-	0.061	13.8	1.8	0.1	13.0	1.6	1.4	1	1	0	1	1	1	0	Cytochrome	c3
Spt4	PF06093.13	gi|84489191|ref|YP_447423.1|	-	0.072	13.2	0.7	0.072	13.2	0.7	3.1	2	1	1	3	3	3	0	Spt4/RpoE2	zinc	finger
Med27	PF11571.8	gi|84489191|ref|YP_447423.1|	-	0.12	12.7	1.9	1.7	9.0	1.0	2.6	1	1	0	1	1	1	0	Mediator	complex	subunit	27
zf-FPG_IleRS	PF06827.14	gi|84489191|ref|YP_447423.1|	-	0.19	11.6	2.1	8.6	6.3	0.0	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_15	PF17032.5	gi|84489191|ref|YP_447423.1|	-	0.88	10.4	10.4	5.4	7.8	8.0	2.6	2	1	0	2	2	1	0	zinc-ribbon	family
HypA	PF01155.19	gi|84489191|ref|YP_447423.1|	-	1.1	9.3	7.4	1.6	8.8	1.1	2.2	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF5357	PF17310.2	gi|84489191|ref|YP_447423.1|	-	1.1	7.7	6.0	1.9	7.0	6.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5357)
PMP22_Claudin	PF00822.20	gi|84489191|ref|YP_447423.1|	-	1.3	8.9	13.2	1	9.3	4.2	2.5	3	0	0	3	3	3	0	PMP-22/EMP/MP20/Claudin	family
zinc-ribbon_6	PF10005.9	gi|84489191|ref|YP_447423.1|	-	1.4	9.6	8.0	1	10.1	0.5	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF35_N	PF12172.8	gi|84489191|ref|YP_447423.1|	-	2.3	8.2	6.4	26	4.8	0.8	3.1	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
FUR	PF01475.19	gi|84489191|ref|YP_447423.1|	-	4.4	7.5	4.9	27	4.9	0.1	3.2	3	1	1	4	4	4	0	Ferric	uptake	regulator	family
DNA_RNApol_7kD	PF03604.13	gi|84489191|ref|YP_447423.1|	-	6.2	6.6	8.4	3.3	7.5	1.4	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Sgf11	PF08209.11	gi|84489191|ref|YP_447423.1|	-	6.6	6.4	10.1	0.79	9.3	0.9	2.7	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
Spore_YtfJ	PF09579.10	gi|84489192|ref|YP_447424.1|	-	2.7e-15	56.3	0.4	6.3e-15	55.1	0.4	1.6	1	0	0	1	1	1	1	Sporulation	protein	YtfJ	(Spore_YtfJ)
LysM	PF01476.20	gi|84489192|ref|YP_447424.1|	-	0.03	14.4	0.5	0.061	13.4	0.5	1.5	1	0	0	1	1	1	0	LysM	domain
DUF2953	PF11167.8	gi|84489193|ref|YP_447425.1|	-	2.4e-08	33.9	0.2	5.9e-08	32.7	0.2	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2953)
CBFD_NFYB_HMF	PF00808.23	gi|84489195|ref|YP_447427.1|	-	3.2e-15	56.2	0.0	3.5e-15	56.0	0.0	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|84489195|ref|YP_447427.1|	-	5.8e-07	29.9	0.0	6.1e-07	29.9	0.0	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
DUF1931	PF09123.11	gi|84489195|ref|YP_447427.1|	-	0.0019	18.3	0.1	0.002	18.2	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1931)
YrzK	PF17449.2	gi|84489195|ref|YP_447427.1|	-	0.05	13.9	0.0	0.065	13.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	YrzK-like
Radical_SAM	PF04055.21	gi|84489196|ref|YP_447428.1|	-	7.1e-22	78.6	0.0	7.1e-22	78.6	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|84489196|ref|YP_447428.1|	-	2.5e-08	34.3	0.7	6.2e-08	33.0	0.0	2.0	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|84489196|ref|YP_447428.1|	-	4e-06	26.9	0.0	4e-06	26.9	0.0	2.8	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
GOLD_2	PF13897.6	gi|84489196|ref|YP_447428.1|	-	0.077	13.5	0.0	0.15	12.6	0.0	1.4	1	0	0	1	1	1	0	Golgi-dynamics	membrane-trafficking
UPF0167	PF03691.14	gi|84489196|ref|YP_447428.1|	-	0.11	12.2	3.7	0.12	12.1	0.2	2.6	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0167)
FeoB_associated	PF12669.7	gi|84489196|ref|YP_447428.1|	-	0.14	12.6	1.6	0.42	11.0	1.6	1.9	1	0	0	1	1	1	0	FeoB-associated	Cys-rich	membrane	protein
CarS-like	PF01864.17	gi|84489197|ref|YP_447429.1|	-	4.5e-61	205.9	13.6	6.6e-61	205.3	13.6	1.2	1	0	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|84489197|ref|YP_447429.1|	-	0.13	12.0	13.7	0.016	14.9	8.3	2.0	1	1	0	1	1	1	0	Cytidylyltransferase	family
Rick_17kDa_Anti	PF05433.15	gi|84489197|ref|YP_447429.1|	-	0.69	9.8	7.8	1.2	9.1	3.0	2.5	2	0	0	2	2	2	0	Glycine	zipper	2TM	domain
Gly-zipper_YMGG	PF13441.6	gi|84489197|ref|YP_447429.1|	-	1.1	9.0	8.0	14	5.5	0.1	2.5	2	0	0	2	2	2	0	YMGG-like	Gly-zipper
DUF2633	PF11119.8	gi|84489197|ref|YP_447429.1|	-	3.5	7.6	6.2	1.2	9.1	0.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2633)
Gly-zipper_Omp	PF13488.6	gi|84489197|ref|YP_447429.1|	-	4	7.5	11.0	5	7.2	3.8	2.6	2	0	0	2	2	2	0	Glycine	zipper
Hydantoinase_A	PF01968.18	gi|84489198|ref|YP_447430.1|	-	4.3e-20	72.1	2.0	9.4e-19	67.8	1.4	2.5	2	1	0	2	2	2	1	Hydantoinase/oxoprolinase
MutL	PF13941.6	gi|84489198|ref|YP_447430.1|	-	2.1e-05	23.3	0.0	0.0031	16.2	0.1	2.2	2	0	0	2	2	2	2	MutL	protein
Hydant_A_N	PF05378.13	gi|84489198|ref|YP_447430.1|	-	0.0052	16.5	1.4	0.56	9.9	0.1	2.7	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
FtsA	PF14450.6	gi|84489198|ref|YP_447430.1|	-	0.015	15.7	1.4	1.7	9.1	0.0	2.9	2	1	0	2	2	2	0	Cell	division	protein	FtsA
DAHP_synth_2	PF01474.16	gi|84489198|ref|YP_447430.1|	-	0.083	11.4	0.0	0.12	10.8	0.0	1.2	1	0	0	1	1	1	0	Class-II	DAHP	synthetase	family
Xrn1_D3	PF18194.1	gi|84489198|ref|YP_447430.1|	-	0.38	10.9	2.2	2.5	8.3	0.4	2.7	2	1	0	2	2	2	0	Exoribonuclease	1	Domain-3
ATP-grasp_3	PF02655.14	gi|84489199|ref|YP_447431.1|	-	1.1e-33	116.6	1.6	1.5e-33	116.2	1.6	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.13	gi|84489199|ref|YP_447431.1|	-	5.6e-05	22.8	0.7	0.00012	21.7	0.7	1.6	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
preATP-grasp_3	PF18301.1	gi|84489199|ref|YP_447431.1|	-	0.00052	20.2	0.0	0.00089	19.5	0.0	1.4	1	0	0	1	1	1	1	pre	ATP-grasp	3	domain
GSH-S_ATP	PF02955.16	gi|84489199|ref|YP_447431.1|	-	0.002	17.5	1.6	0.0048	16.3	1.6	1.6	1	1	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|84489199|ref|YP_447431.1|	-	0.0021	17.6	2.6	0.0066	16.1	2.6	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|84489199|ref|YP_447431.1|	-	0.084	12.6	0.0	0.15	11.8	0.0	1.5	1	0	0	1	1	1	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
RimK	PF08443.11	gi|84489199|ref|YP_447431.1|	-	1.4	8.5	7.8	6.1	6.4	7.8	1.9	1	1	0	1	1	1	0	RimK-like	ATP-grasp	domain
PseudoU_synth_1	PF01416.20	gi|84489200|ref|YP_447432.1|	-	3.1e-27	95.2	0.0	3.3e-22	79.0	0.0	2.1	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
His_biosynth	PF00977.21	gi|84489201|ref|YP_447433.1|	-	8.5e-80	267.5	1.8	9.6e-80	267.3	1.8	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.17	gi|84489201|ref|YP_447433.1|	-	5.8e-12	45.3	0.1	7e-05	22.1	0.0	2.2	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
ThiG	PF05690.14	gi|84489201|ref|YP_447433.1|	-	9.4e-09	34.9	0.4	0.00024	20.5	0.1	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
DHO_dh	PF01180.21	gi|84489201|ref|YP_447433.1|	-	4.2e-07	29.5	1.4	0.0031	16.8	0.1	2.2	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
NanE	PF04131.14	gi|84489201|ref|YP_447433.1|	-	3.4e-06	26.4	0.1	0.056	12.6	0.0	2.2	2	0	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
PcrB	PF01884.17	gi|84489201|ref|YP_447433.1|	-	1.5e-05	24.6	1.4	0.0067	15.9	0.2	2.2	2	0	0	2	2	2	2	PcrB	family
FMN_dh	PF01070.18	gi|84489201|ref|YP_447433.1|	-	1.9e-05	23.9	0.2	0.038	13.0	0.2	2.2	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|84489201|ref|YP_447433.1|	-	2.5e-05	23.5	0.3	0.13	11.2	0.1	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
Trp_syntA	PF00290.20	gi|84489201|ref|YP_447433.1|	-	0.00018	20.5	0.1	0.031	13.1	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	synthase	alpha	chain
TMP-TENI	PF02581.17	gi|84489201|ref|YP_447433.1|	-	0.00024	20.5	0.4	0.076	12.3	0.0	2.4	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase
IGPS	PF00218.21	gi|84489201|ref|YP_447433.1|	-	0.00027	20.2	0.6	0.8	8.8	0.0	3.2	2	2	1	4	4	4	2	Indole-3-glycerol	phosphate	synthase
SOR_SNZ	PF01680.17	gi|84489201|ref|YP_447433.1|	-	0.0026	17.6	0.1	0.066	13.0	0.0	2.4	2	1	1	3	3	3	1	SOR/SNZ	family
G3P_antiterm	PF04309.12	gi|84489201|ref|YP_447433.1|	-	0.003	17.0	1.0	1.7	8.1	0.2	2.4	2	0	0	2	2	2	2	Glycerol-3-phosphate	responsive	antiterminator
NMO	PF03060.15	gi|84489201|ref|YP_447433.1|	-	0.0048	16.3	0.1	0.31	10.4	0.0	2.1	1	1	0	2	2	2	1	Nitronate	monooxygenase
B12-binding	PF02310.19	gi|84489201|ref|YP_447433.1|	-	0.016	15.2	0.0	0.91	9.6	0.0	2.2	2	0	0	2	2	2	0	B12	binding	domain
Ribul_P_3_epim	PF00834.19	gi|84489201|ref|YP_447433.1|	-	0.032	13.6	0.4	3.7	6.9	0.0	2.5	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
GRDA	PF04723.14	gi|84489201|ref|YP_447433.1|	-	0.052	13.3	0.0	0.49	10.2	0.0	2.2	2	0	0	2	2	2	0	Glycine	reductase	complex	selenoprotein	A
Ets	PF00178.22	gi|84489201|ref|YP_447433.1|	-	0.1	13.1	0.0	1.8	9.1	0.0	2.2	2	0	0	2	2	2	0	Ets-domain
CTP_transf_like	PF01467.26	gi|84489202|ref|YP_447434.1|	-	1.4e-17	64.2	0.0	1.7e-17	64.0	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|84489202|ref|YP_447434.1|	-	0.05	13.5	0.1	0.1	12.5	0.1	1.8	1	1	0	1	1	1	0	FAD	synthetase
Radical_SAM	PF04055.21	gi|84489204|ref|YP_447436.1|	-	2.7e-13	50.6	0.2	1.3e-12	48.4	0.4	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
DUF3473	PF11959.8	gi|84489204|ref|YP_447436.1|	-	0.096	12.7	0.0	8.7	6.4	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3473)
Fer4_14	PF13394.6	gi|84489204|ref|YP_447436.1|	-	0.12	12.5	1.1	0.31	11.2	1.1	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
ABC_tran	PF00005.27	gi|84489205|ref|YP_447437.1|	-	1.5e-55	187.5	0.0	4.8e-27	95.1	0.0	2.3	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|84489205|ref|YP_447437.1|	-	2.6e-08	33.6	4.4	0.0025	17.3	0.2	4.0	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|84489205|ref|YP_447437.1|	-	3.3e-06	27.1	0.2	0.048	13.6	0.0	2.6	2	0	0	2	2	2	2	RsgA	GTPase
AAA_21	PF13304.6	gi|84489205|ref|YP_447437.1|	-	5.5e-06	26.4	4.7	0.97	9.2	0.1	4.1	3	1	1	4	4	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|84489205|ref|YP_447437.1|	-	1.8e-05	24.4	0.9	0.097	12.4	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|84489205|ref|YP_447437.1|	-	2.8e-05	24.6	0.0	0.2	12.0	0.0	2.8	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|84489205|ref|YP_447437.1|	-	0.00019	21.7	0.1	1.4	9.2	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
AAA_30	PF13604.6	gi|84489205|ref|YP_447437.1|	-	0.00098	18.9	0.0	0.43	10.3	0.1	2.8	3	0	0	3	3	3	1	AAA	domain
SbcCD_C	PF13558.6	gi|84489205|ref|YP_447437.1|	-	0.0053	17.0	0.0	4.1	7.7	0.0	3.7	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
NB-ARC	PF00931.22	gi|84489205|ref|YP_447437.1|	-	0.011	14.9	4.8	2	7.5	0.1	3.1	2	1	0	2	2	2	0	NB-ARC	domain
AAA_18	PF13238.6	gi|84489205|ref|YP_447437.1|	-	0.021	15.4	1.9	1.8	9.1	0.0	3.6	3	1	0	3	3	3	0	AAA	domain
MobB	PF03205.14	gi|84489205|ref|YP_447437.1|	-	0.022	14.6	0.1	6.2	6.7	0.1	2.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.23	gi|84489205|ref|YP_447437.1|	-	0.023	14.8	6.4	0.75	9.9	0.1	4.1	3	2	1	4	4	4	0	50S	ribosome-binding	GTPase
ATP-synt_ab	PF00006.25	gi|84489205|ref|YP_447437.1|	-	0.033	13.8	0.1	11	5.5	0.1	2.8	2	1	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|84489205|ref|YP_447437.1|	-	0.042	14.0	2.5	0.43	10.7	0.1	3.0	3	1	0	3	3	3	0	AAA	domain
GCD14	PF08704.10	gi|84489205|ref|YP_447437.1|	-	0.046	13.4	0.2	0.21	11.2	0.0	1.9	2	0	0	2	2	2	0	tRNA	methyltransferase	complex	GCD14	subunit
PEPCK_ATP	PF01293.20	gi|84489205|ref|YP_447437.1|	-	0.051	12.2	0.1	0.1	11.3	0.1	1.4	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
FtsK_SpoIIIE	PF01580.18	gi|84489205|ref|YP_447437.1|	-	0.074	12.4	0.4	0.63	9.3	0.0	2.2	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
cobW	PF02492.19	gi|84489205|ref|YP_447437.1|	-	0.18	11.4	2.9	28	4.2	0.1	3.7	4	0	0	4	4	4	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.6	gi|84489205|ref|YP_447437.1|	-	0.19	11.3	0.2	9.2	5.8	0.3	2.5	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|84489205|ref|YP_447437.1|	-	0.21	11.5	1.1	13	5.7	0.1	2.6	2	0	0	2	2	2	0	NACHT	domain
AAA	PF00004.29	gi|84489205|ref|YP_447437.1|	-	0.25	11.8	1.2	6.3	7.2	0.8	3.1	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Pox_A32	PF04665.12	gi|84489205|ref|YP_447437.1|	-	0.52	9.7	4.6	13	5.2	0.3	3.1	3	0	0	3	3	3	0	Poxvirus	A32	protein
DUF87	PF01935.17	gi|84489205|ref|YP_447437.1|	-	5.3	7.1	7.7	4.7	7.2	0.1	3.3	3	1	0	3	3	3	0	Helicase	HerA,	central	domain
HrcA_DNA-bdg	PF03444.15	gi|84489206|ref|YP_447438.1|	-	1.8e-37	126.8	0.1	4e-37	125.7	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.28	gi|84489206|ref|YP_447438.1|	-	8.4e-17	61.4	0.6	6.6e-08	32.9	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.20	gi|84489206|ref|YP_447438.1|	-	1.5e-06	28.5	0.0	3.3e-06	27.4	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.12	gi|84489206|ref|YP_447438.1|	-	3.2e-05	23.8	0.0	0.00012	22.0	0.0	2.0	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.7	gi|84489206|ref|YP_447438.1|	-	0.087	12.9	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
DS	PF01916.17	gi|84489207|ref|YP_447439.1|	-	1.5e-89	300.0	0.0	1.8e-89	299.9	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
DUF4064	PF13273.6	gi|84489208|ref|YP_447440.1|	-	0.19	12.0	12.9	2.4	8.5	2.8	2.7	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4064)
OMPdecase	PF00215.24	gi|84489209|ref|YP_447441.1|	-	6.4e-35	120.8	0.4	8.5e-35	120.4	0.4	1.2	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
DHDPS	PF00701.22	gi|84489209|ref|YP_447441.1|	-	0.007	15.1	0.0	0.012	14.3	0.0	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
NtA	PF03146.15	gi|84489209|ref|YP_447441.1|	-	0.055	13.3	0.0	0.095	12.6	0.0	1.4	1	0	0	1	1	1	0	Agrin	NtA	domain
DUF5591	PF17884.1	gi|84489209|ref|YP_447441.1|	-	0.15	11.9	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5591)
CbiM	PF01891.16	gi|84489210|ref|YP_447442.1|	-	9.6e-54	182.4	14.9	1.1e-53	182.2	14.9	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
TraL	PF07178.11	gi|84489210|ref|YP_447442.1|	-	1.6	9.3	10.6	1.1	9.8	0.2	3.7	2	2	0	3	3	3	0	TraL	protein
FeoB_associated	PF12669.7	gi|84489210|ref|YP_447442.1|	-	3.4	8.1	0.0	3.4	8.1	0.0	3.8	5	0	0	5	5	5	0	FeoB-associated	Cys-rich	membrane	protein
CbiN	PF02553.15	gi|84489211|ref|YP_447443.1|	-	7.2e-28	96.4	0.0	8.9e-28	96.1	0.0	1.1	1	0	0	1	1	1	1	Cobalt	transport	protein	component	CbiN
CbiQ	PF02361.16	gi|84489212|ref|YP_447444.1|	-	2.9e-45	154.6	11.5	2.9e-45	154.6	11.5	1.4	2	0	0	2	2	2	1	Cobalt	transport	protein
ABC_tran	PF00005.27	gi|84489213|ref|YP_447445.1|	-	1.7e-33	116.0	0.0	5.1e-33	114.5	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|84489213|ref|YP_447445.1|	-	4.6e-13	49.7	0.1	2.3e-10	40.8	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|84489213|ref|YP_447445.1|	-	4.1e-07	29.7	0.1	7.9e-06	25.5	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_13	PF13166.6	gi|84489213|ref|YP_447445.1|	-	0.0015	17.3	0.2	0.045	12.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|84489213|ref|YP_447445.1|	-	0.0054	16.4	1.2	0.008	15.9	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|84489213|ref|YP_447445.1|	-	0.0092	15.7	0.0	2.6	7.7	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|84489213|ref|YP_447445.1|	-	0.025	15.1	0.2	0.057	13.9	0.2	1.5	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|84489213|ref|YP_447445.1|	-	0.029	14.3	0.0	0.053	13.4	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
SbcCD_C	PF13558.6	gi|84489213|ref|YP_447445.1|	-	0.15	12.3	0.0	0.92	9.8	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Zeta_toxin	PF06414.12	gi|84489213|ref|YP_447445.1|	-	0.19	11.0	0.0	0.3	10.3	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_16	PF13191.6	gi|84489213|ref|YP_447445.1|	-	0.21	12.0	0.0	0.35	11.2	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
PmbA_TldD	PF01523.16	gi|84489214|ref|YP_447446.1|	-	8.1e-62	209.6	2.0	1.1e-61	209.2	2.0	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
AMMECR1	PF01871.17	gi|84489215|ref|YP_447447.1|	-	4.6e-50	169.5	0.0	5.1e-50	169.3	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
NOG1_N	PF17835.1	gi|84489216|ref|YP_447448.1|	-	8.5e-40	136.3	0.0	1.5e-39	135.6	0.0	1.4	1	0	0	1	1	1	1	NOG1	N-terminal	helical	domain
NOG1	PF06858.14	gi|84489216|ref|YP_447448.1|	-	1e-19	70.0	0.1	2.3e-19	68.9	0.1	1.6	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
MMR_HSR1	PF01926.23	gi|84489216|ref|YP_447448.1|	-	1.4e-19	70.2	0.0	2.5e-19	69.5	0.0	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|84489216|ref|YP_447448.1|	-	1.8e-15	56.8	0.2	2.6e-15	56.3	0.2	1.2	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|84489216|ref|YP_447448.1|	-	2.7e-07	30.6	0.5	0.028	14.3	0.1	2.8	2	1	0	2	2	2	2	RsgA	GTPase
AIG1	PF04548.16	gi|84489216|ref|YP_447448.1|	-	2.2e-05	23.9	0.0	3.6e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	AIG1	family
Dynamin_N	PF00350.23	gi|84489216|ref|YP_447448.1|	-	0.0028	17.7	0.2	1.2	9.2	0.0	2.6	1	1	1	2	2	2	2	Dynamin	family
cobW	PF02492.19	gi|84489216|ref|YP_447448.1|	-	0.0057	16.3	0.0	1.4	8.5	0.0	2.3	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
Arf	PF00025.21	gi|84489216|ref|YP_447448.1|	-	0.012	15.0	0.1	0.12	11.9	0.1	2.2	1	1	0	1	1	1	0	ADP-ribosylation	factor	family
GTP_EFTU	PF00009.27	gi|84489216|ref|YP_447448.1|	-	0.015	14.8	0.1	9	5.8	0.1	2.9	1	1	1	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
Ras	PF00071.22	gi|84489216|ref|YP_447448.1|	-	0.11	12.0	0.1	0.61	9.7	0.1	2.0	1	1	0	1	1	1	0	Ras	family
HSP20	PF00011.21	gi|84489217|ref|YP_447449.1|	-	5.7e-11	42.5	0.3	5.7e-11	42.5	0.3	1.8	2	0	0	2	2	2	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|84489217|ref|YP_447449.1|	-	5.4e-07	29.1	0.1	3.7e-06	26.4	0.0	2.1	1	1	1	2	2	2	2	HSP20-like	domain	found	in	ArsA
3H	PF02829.14	gi|84489218|ref|YP_447450.1|	-	3.8e-21	75.2	1.8	3.8e-21	75.2	1.8	2.0	2	0	0	2	2	2	1	3H	domain
AAA_18	PF13238.6	gi|84489218|ref|YP_447450.1|	-	0.00014	22.4	1.4	0.00069	20.2	0.2	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|84489218|ref|YP_447450.1|	-	0.0029	18.0	0.1	0.043	14.2	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|84489218|ref|YP_447450.1|	-	0.0073	16.1	0.4	0.016	15.0	0.4	1.9	1	1	0	1	1	1	1	Cytidylate	kinase
Cytidylate_kin2	PF13189.6	gi|84489218|ref|YP_447450.1|	-	0.013	15.6	1.3	0.022	14.9	0.2	2.0	3	0	0	3	3	3	0	Cytidylate	kinase-like	family
AAA_22	PF13401.6	gi|84489218|ref|YP_447450.1|	-	0.014	15.7	0.0	0.06	13.6	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|84489218|ref|YP_447450.1|	-	0.015	15.5	0.0	0.6	10.3	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|84489218|ref|YP_447450.1|	-	0.036	14.4	0.0	0.074	13.4	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.29	gi|84489218|ref|YP_447450.1|	-	0.047	14.1	0.3	0.22	12.0	0.0	2.3	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
zf-ZPR1	PF03367.13	gi|84489219|ref|YP_447451.1|	-	1.5e-35	122.4	0.1	1.9e-35	122.1	0.1	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.6	gi|84489219|ref|YP_447451.1|	-	0.00043	20.6	0.1	0.00082	19.7	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.11	gi|84489219|ref|YP_447451.1|	-	0.022	14.7	1.2	0.21	11.6	0.1	2.3	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|84489219|ref|YP_447451.1|	-	0.034	14.1	0.1	0.084	12.9	0.1	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Elf1	PF05129.13	gi|84489219|ref|YP_447451.1|	-	0.045	13.8	0.1	0.083	12.9	0.1	1.5	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Prim_Zn_Ribbon	PF08273.12	gi|84489219|ref|YP_447451.1|	-	0.51	10.7	3.0	1.1	9.6	3.0	1.6	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
TF_Zn_Ribbon	PF08271.12	gi|84489219|ref|YP_447451.1|	-	0.53	9.9	4.6	0.53	9.8	1.8	2.4	2	1	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.6	gi|84489219|ref|YP_447451.1|	-	1.3	8.8	3.9	6	6.7	0.0	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|84489219|ref|YP_447451.1|	-	2.5	7.9	5.5	2.7	7.8	1.4	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Nitroreductase	PF00881.24	gi|84489220|ref|YP_447452.1|	-	1.7e-30	106.3	0.0	9.1e-15	55.1	0.0	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|84489220|ref|YP_447452.1|	-	4.8e-17	62.3	0.0	8.2e-16	58.2	0.0	3.0	1	1	0	1	1	1	1	Putative	TM	nitroreductase
CBFD_NFYB_HMF	PF00808.23	gi|84489221|ref|YP_447453.1|	-	0.025	14.8	0.5	0.073	13.4	0.1	2.0	2	0	0	2	2	2	0	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
YxiJ	PF14176.6	gi|84489221|ref|YP_447453.1|	-	0.043	14.3	0.4	0.15	12.6	0.1	2.0	2	1	0	2	2	2	0	YxiJ-like	protein
TUG-UBL1	PF11470.8	gi|84489221|ref|YP_447453.1|	-	0.043	14.0	0.0	0.084	13.1	0.0	1.5	1	0	0	1	1	1	0	TUG	ubiquitin-like	domain
QRPTase_C	PF01729.19	gi|84489222|ref|YP_447454.1|	-	8.3e-60	201.4	1.7	1e-59	201.1	1.7	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.16	gi|84489222|ref|YP_447454.1|	-	6.9e-27	93.3	0.0	1.3e-26	92.5	0.0	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Lactamase_B_2	PF12706.7	gi|84489223|ref|YP_447455.1|	-	4.7e-15	55.6	0.1	2.2e-06	27.3	0.0	2.2	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|84489223|ref|YP_447455.1|	-	1.1e-10	41.9	3.3	4e-09	36.8	1.1	2.7	2	1	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|84489223|ref|YP_447455.1|	-	0.0004	20.0	0.0	0.00075	19.1	0.0	1.4	1	0	0	1	1	1	1	tRNase	Z	endonuclease
PDEase_II	PF02112.15	gi|84489223|ref|YP_447455.1|	-	0.067	12.3	0.1	0.15	11.1	0.1	1.5	1	0	0	1	1	1	0	cAMP	phosphodiesterases	class-II
Stomoxyn	PF11585.8	gi|84489223|ref|YP_447455.1|	-	3.2	7.9	7.0	6.8	6.8	2.5	2.6	3	0	0	3	3	3	0	Insect	antimicrobial	peptide,	stomoxyn
SHOCT	PF09851.9	gi|84489224|ref|YP_447456.1|	-	2.7e-07	30.1	4.8	4.6e-07	29.4	4.8	1.4	1	0	0	1	1	1	1	Short	C-terminal	domain
Rep_fac_C	PF08542.11	gi|84489225|ref|YP_447457.1|	-	2.1e-20	72.9	0.3	5.4e-20	71.6	0.1	1.8	2	0	0	2	2	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|84489225|ref|YP_447457.1|	-	3.2e-16	60.0	0.2	1e-15	58.3	0.0	1.9	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.6	gi|84489225|ref|YP_447457.1|	-	9e-16	58.1	0.1	2e-11	44.0	0.1	2.6	1	1	1	2	2	2	2	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.15	gi|84489225|ref|YP_447457.1|	-	1.6e-06	28.2	0.0	1.6e-05	24.9	0.0	2.4	2	1	1	3	3	3	1	Rad17	P-loop	domain
AAA_16	PF13191.6	gi|84489225|ref|YP_447457.1|	-	1.7e-06	28.5	0.2	0.00056	20.3	0.0	2.6	2	1	1	3	3	3	1	AAA	ATPase	domain
RuvB_N	PF05496.12	gi|84489225|ref|YP_447457.1|	-	1.8e-06	27.8	0.1	1.8e-05	24.6	0.1	2.4	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_14	PF13173.6	gi|84489225|ref|YP_447457.1|	-	2.1e-06	27.8	0.0	5.2e-06	26.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
DNA_pol3_delta	PF06144.13	gi|84489225|ref|YP_447457.1|	-	1.5e-05	24.9	0.1	2.7e-05	24.0	0.1	1.4	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_assoc_2	PF16193.5	gi|84489225|ref|YP_447457.1|	-	0.0001	22.6	0.3	0.0003	21.1	0.1	1.9	2	0	0	2	2	1	1	AAA	C-terminal	domain
Mg_chelatase	PF01078.21	gi|84489225|ref|YP_447457.1|	-	0.00011	21.7	0.0	0.1	12.0	0.0	2.4	1	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.6	gi|84489225|ref|YP_447457.1|	-	0.00043	20.1	0.0	0.0012	18.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|84489225|ref|YP_447457.1|	-	0.00045	20.8	0.2	0.0013	19.3	0.0	1.9	2	2	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|84489225|ref|YP_447457.1|	-	0.00058	19.6	0.0	0.0021	17.8	0.0	1.8	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
ResIII	PF04851.15	gi|84489225|ref|YP_447457.1|	-	0.00063	19.8	0.1	0.0019	18.2	0.1	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.6	gi|84489225|ref|YP_447457.1|	-	0.00081	19.7	0.7	0.041	14.2	0.3	2.9	2	2	1	3	3	3	1	AAA	domain
Sigma54_activat	PF00158.26	gi|84489225|ref|YP_447457.1|	-	0.0012	18.6	0.0	1.3	8.7	0.0	2.3	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_5	PF07728.14	gi|84489225|ref|YP_447457.1|	-	0.0029	17.6	0.2	0.019	15.0	0.0	2.4	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.14	gi|84489225|ref|YP_447457.1|	-	0.004	17.3	0.1	0.024	14.7	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_3	PF07726.11	gi|84489225|ref|YP_447457.1|	-	0.0078	16.1	0.0	0.018	14.9	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.18	gi|84489225|ref|YP_447457.1|	-	0.016	14.9	0.0	0.042	13.6	0.0	1.6	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_7	PF12775.7	gi|84489225|ref|YP_447457.1|	-	0.017	14.6	0.1	0.041	13.4	0.0	1.7	2	0	0	2	2	1	0	P-loop	containing	dynein	motor	region
TIP49	PF06068.13	gi|84489225|ref|YP_447457.1|	-	0.022	14.0	0.2	0.04	13.1	0.2	1.8	1	1	0	1	1	1	0	TIP49	P-loop	domain
DUF815	PF05673.13	gi|84489225|ref|YP_447457.1|	-	0.027	13.6	0.0	0.047	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
DUF3400	PF11880.8	gi|84489225|ref|YP_447457.1|	-	0.03	13.9	0.0	0.067	12.7	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3400)
DSBA	PF01323.20	gi|84489225|ref|YP_447457.1|	-	0.055	13.2	0.0	6	6.6	0.0	2.2	2	0	0	2	2	2	0	DSBA-like	thioredoxin	domain
CbiA	PF01656.23	gi|84489225|ref|YP_447457.1|	-	0.079	13.0	1.5	1.2	9.2	0.2	2.4	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Sigma54_activ_2	PF14532.6	gi|84489225|ref|YP_447457.1|	-	0.086	13.0	0.0	0.34	11.0	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
RNA_helicase	PF00910.22	gi|84489225|ref|YP_447457.1|	-	0.12	12.8	0.1	0.41	11.1	0.0	2.0	2	0	0	2	2	1	0	RNA	helicase
APS_kinase	PF01583.20	gi|84489225|ref|YP_447457.1|	-	0.13	12.2	0.0	0.28	11.1	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
SRP54	PF00448.22	gi|84489225|ref|YP_447457.1|	-	0.14	11.7	1.8	0.17	11.5	0.3	1.9	2	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA	PF00004.29	gi|84489226|ref|YP_447458.1|	-	4.8e-11	43.2	0.0	1.4e-10	41.7	0.0	1.8	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|84489226|ref|YP_447458.1|	-	2.4e-06	27.4	0.0	4.6e-06	26.5	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_14	PF13173.6	gi|84489226|ref|YP_447458.1|	-	1.6e-05	24.9	1.2	4.5e-05	23.5	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_assoc_2	PF16193.5	gi|84489226|ref|YP_447458.1|	-	0.00029	21.1	0.1	0.00029	21.1	0.1	2.7	2	0	0	2	2	2	1	AAA	C-terminal	domain
AAA_22	PF13401.6	gi|84489226|ref|YP_447458.1|	-	0.00062	20.0	0.3	0.014	15.6	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|84489226|ref|YP_447458.1|	-	0.0028	18.0	0.0	0.0066	16.8	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
Mg_chelatase	PF01078.21	gi|84489226|ref|YP_447458.1|	-	0.0089	15.4	0.0	0.02	14.3	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|84489226|ref|YP_447458.1|	-	0.011	15.8	0.1	0.045	13.8	0.0	2.2	2	1	1	3	3	3	0	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|84489226|ref|YP_447458.1|	-	0.018	14.8	0.5	0.11	12.2	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.6	gi|84489226|ref|YP_447458.1|	-	0.025	14.9	0.1	0.16	12.3	0.1	2.2	1	1	1	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|84489226|ref|YP_447458.1|	-	0.064	13.8	3.5	0.41	11.2	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
Arginase	PF00491.21	gi|84489227|ref|YP_447459.1|	-	5.8e-70	236.0	0.3	6.9e-70	235.7	0.3	1.0	1	0	0	1	1	1	1	Arginase	family
UPF0489	PF12640.7	gi|84489227|ref|YP_447459.1|	-	0.027	14.7	3.2	0.067	13.4	3.1	1.7	1	1	0	1	1	1	0	UPF0489	domain
ALAD	PF00490.21	gi|84489228|ref|YP_447460.1|	-	1.2e-137	458.3	1.4	1.3e-137	458.2	1.4	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
Cas_Cas6	PF01881.16	gi|84489230|ref|YP_447462.1|	-	7.8e-22	78.4	6.7	1.5e-21	77.5	6.7	1.5	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas6
DUF3078	PF11276.8	gi|84489230|ref|YP_447462.1|	-	0.024	15.1	1.8	0.044	14.2	1.8	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3078)
Cas_TM1802	PF09484.10	gi|84489231|ref|YP_447463.1|	-	2.1e-144	482.6	50.4	2.3e-144	482.4	50.4	1.0	1	0	0	1	1	1	1	CRISPR-associated	protein	TM1802	(cas_TM1802)
RasGEF_N_2	PF14663.6	gi|84489231|ref|YP_447463.1|	-	0.079	13.4	4.9	2.7	8.4	0.1	3.6	4	0	0	4	4	4	0	Rapamycin-insensitive	companion	of	mTOR	RasGEF_N	domain
Cas_CXXC_CXXC	PF09706.10	gi|84489231|ref|YP_447463.1|	-	0.96	9.7	3.3	1.3	9.3	0.1	2.9	3	0	0	3	3	3	0	CRISPR-associated	protein	(Cas_CXXC_CXXC)
Cas_Cas7	PF05107.12	gi|84489232|ref|YP_447464.1|	-	2.1e-63	214.2	1.4	8.1e-63	212.3	0.1	1.9	2	0	0	2	2	2	1	CRISPR-associated	protein	Cas7
Cas_Cas5d	PF09704.10	gi|84489233|ref|YP_447465.1|	-	2e-13	50.7	0.0	2.4e-13	50.5	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
M20_dimer	PF07687.14	gi|84489233|ref|YP_447465.1|	-	0.18	11.7	0.0	0.27	11.2	0.0	1.2	1	0	0	1	1	1	0	Peptidase	dimerisation	domain
ResIII	PF04851.15	gi|84489234|ref|YP_447466.1|	-	6.9e-10	39.2	1.5	6.9e-10	39.2	1.5	3.5	4	0	0	4	4	4	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|84489234|ref|YP_447466.1|	-	2.5e-09	37.4	0.9	2.5e-09	37.4	0.9	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|84489234|ref|YP_447466.1|	-	7.5e-09	35.6	0.1	1.4e-07	31.4	0.1	2.9	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
PhoH	PF02562.16	gi|84489234|ref|YP_447466.1|	-	5.9e-06	25.9	0.0	0.035	13.6	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
HD	PF01966.22	gi|84489234|ref|YP_447466.1|	-	3.3e-05	24.1	0.2	0.0005	20.3	0.0	2.7	2	0	0	2	2	2	1	HD	domain
SNF2_N	PF00176.23	gi|84489234|ref|YP_447466.1|	-	9.9e-05	21.2	2.2	0.00011	21.1	0.0	2.0	2	0	0	2	2	2	1	SNF2	family	N-terminal	domain
AAA_22	PF13401.6	gi|84489234|ref|YP_447466.1|	-	0.00011	22.4	0.0	0.0065	16.7	0.0	2.9	1	1	0	1	1	1	1	AAA	domain
SWI2_SNF2	PF18766.1	gi|84489234|ref|YP_447466.1|	-	0.0061	16.3	0.0	3.6	7.2	0.0	2.6	2	0	0	2	2	2	2	SWI2/SNF2	ATPase
HD_6	PF18019.1	gi|84489234|ref|YP_447466.1|	-	0.029	14.5	0.0	0.064	13.4	0.0	1.5	1	0	0	1	1	1	0	HD	domain
AAA_assoc	PF14363.6	gi|84489234|ref|YP_447466.1|	-	0.23	11.8	2.1	0.73	10.2	0.1	2.9	2	1	1	3	3	3	0	Domain	associated	at	C-terminal	with	AAA
LRR_4	PF12799.7	gi|84489234|ref|YP_447466.1|	-	0.43	11.1	5.9	8.7	6.9	0.1	3.6	3	0	0	3	3	3	0	Leucine	Rich	repeats	(2	copies)
Cas_Cas4	PF01930.17	gi|84489235|ref|YP_447467.1|	-	4e-54	183.1	5.7	4.4e-54	182.9	5.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|84489235|ref|YP_447467.1|	-	2.9e-06	27.4	0.4	1.1e-05	25.5	0.3	1.7	1	1	1	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
Csm1_N	PF18504.1	gi|84489235|ref|YP_447467.1|	-	0.028	14.7	2.5	0.043	14.2	0.1	2.1	2	0	0	2	2	2	0	Csm1	N-terminal	domain
DUF2098	PF09871.9	gi|84489235|ref|YP_447467.1|	-	0.66	10.3	6.2	1.2	9.5	1.6	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
Cas_Cas1	PF01867.16	gi|84489236|ref|YP_447468.1|	-	1.1e-77	261.0	1.5	1.2e-77	260.8	1.5	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
CRISPR_Cas2	PF09827.9	gi|84489237|ref|YP_447469.1|	-	2.2e-21	75.8	3.5	2.7e-21	75.5	3.5	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
DNA_pol_B_exo2	PF10108.9	gi|84489237|ref|YP_447469.1|	-	0.0039	16.9	0.1	0.004	16.9	0.1	1.1	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
Pik1	PF11522.8	gi|84489238|ref|YP_447470.1|	-	0.00014	21.7	0.4	21	5.1	0.0	4.1	4	0	0	4	4	4	4	Yeast	phosphatidylinositol-4-OH	kinase	Pik1
zf-primase	PF09329.11	gi|84489239|ref|YP_447471.1|	-	0.042	13.7	1.3	0.092	12.6	1.3	1.7	1	1	0	1	1	1	0	Primase	zinc	finger
CitG	PF01874.16	gi|84489240|ref|YP_447472.1|	-	1.9e-65	221.3	0.0	2.1e-65	221.1	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
Herpes_BBRF1	PF04793.12	gi|84489240|ref|YP_447472.1|	-	0.029	13.4	0.0	0.04	12.9	0.0	1.2	1	0	0	1	1	1	0	BRRF1-like	protein
Chalcone	PF02431.15	gi|84489240|ref|YP_447472.1|	-	0.029	13.8	0.0	0.046	13.1	0.0	1.2	1	0	0	1	1	1	0	Chalcone-flavanone	isomerase
tRNA-synt_2d	PF01409.20	gi|84489241|ref|YP_447473.1|	-	1.1e-96	323.0	0.0	1.7e-96	322.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|84489241|ref|YP_447473.1|	-	2.2e-12	46.9	0.0	4.5e-09	36.1	0.0	2.3	2	0	0	2	2	2	2	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2	PF00152.20	gi|84489241|ref|YP_447473.1|	-	0.0012	18.0	0.3	0.09	11.8	0.0	2.6	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2b	PF00587.25	gi|84489241|ref|YP_447473.1|	-	0.0072	16.3	0.1	0.022	14.7	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HTH_24	PF13412.6	gi|84489241|ref|YP_447473.1|	-	0.0095	15.5	0.0	0.074	12.6	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TetR_N	PF00440.23	gi|84489241|ref|YP_447473.1|	-	0.072	12.9	0.0	0.19	11.6	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
TFIIE_alpha	PF02002.17	gi|84489241|ref|YP_447473.1|	-	0.15	12.0	0.4	0.57	10.1	0.2	2.1	2	0	0	2	2	2	0	TFIIE	alpha	subunit
TrmB	PF01978.19	gi|84489241|ref|YP_447473.1|	-	0.17	11.8	0.0	2.5	8.0	0.1	2.3	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
4HFCP_synth	PF04476.13	gi|84489242|ref|YP_447474.1|	-	2.6e-85	285.8	0.0	2.9e-85	285.6	0.0	1.0	1	0	0	1	1	1	1	4-HFC-P	synthase
QRPTase_C	PF01729.19	gi|84489242|ref|YP_447474.1|	-	0.0013	18.5	0.1	0.17	11.6	0.1	2.6	1	1	0	2	2	2	2	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF1327	PF07041.11	gi|84489242|ref|YP_447474.1|	-	0.042	13.9	0.3	0.18	11.8	0.2	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1327)
IMPDH	PF00478.25	gi|84489243|ref|YP_447475.1|	-	1e-142	475.2	8.7	1.2e-142	475.0	8.7	1.1	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.28	gi|84489243|ref|YP_447475.1|	-	1.1e-25	89.9	7.4	2e-12	47.3	0.3	3.2	3	0	0	3	3	3	2	CBS	domain
NMO	PF03060.15	gi|84489243|ref|YP_447475.1|	-	2.4e-12	46.9	8.8	2.5e-07	30.4	6.3	2.3	2	1	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|84489243|ref|YP_447475.1|	-	3.3e-09	36.2	5.8	4.5e-09	35.8	2.0	2.7	3	0	0	3	3	3	1	FMN-dependent	dehydrogenase
Glu_synthase	PF01645.17	gi|84489243|ref|YP_447475.1|	-	1.5e-05	24.3	5.8	1.5e-05	24.3	5.8	2.6	2	2	0	3	3	3	1	Conserved	region	in	glutamate	synthase
His_biosynth	PF00977.21	gi|84489243|ref|YP_447475.1|	-	0.00016	21.3	6.1	0.002	17.6	2.1	2.8	2	1	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|84489243|ref|YP_447475.1|	-	0.0011	18.3	0.8	0.0011	18.3	0.8	2.2	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|84489243|ref|YP_447475.1|	-	0.0066	15.6	4.1	0.081	12.0	0.0	2.5	3	0	0	3	3	3	2	Dihydrouridine	synthase	(Dus)
PEP_mutase	PF13714.6	gi|84489243|ref|YP_447475.1|	-	0.023	14.2	0.3	0.31	10.4	0.0	2.2	2	0	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Big_3_5	PF16640.5	gi|84489244|ref|YP_447476.1|	-	1e-08	35.3	12.4	2.2e-06	27.7	6.2	8.5	9	0	0	9	9	9	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489244|ref|YP_447476.1|	-	0.0064	16.5	0.2	0.0064	16.5	0.2	7.3	6	1	0	6	6	6	1	Bacterial	Ig-like	domain	(group	1)
DUF824	PF05688.11	gi|84489244|ref|YP_447476.1|	-	0.013	15.3	7.4	0.053	13.4	0.1	4.1	2	1	1	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
Ribosomal_L19	PF01245.20	gi|84489244|ref|YP_447476.1|	-	0.019	14.9	0.4	2.8	7.9	0.2	3.4	2	0	0	2	2	2	0	Ribosomal	protein	L19
Cytochrome_cB	PF11783.8	gi|84489244|ref|YP_447476.1|	-	0.035	14.0	0.9	0.17	11.7	0.9	2.3	1	0	0	1	1	1	0	Cytochrome	c	bacterial
NDK	PF00334.19	gi|84489244|ref|YP_447476.1|	-	0.045	13.8	0.1	0.14	12.2	0.1	1.8	1	0	0	1	1	1	0	Nucleoside	diphosphate	kinase
DUF3426	PF11906.8	gi|84489244|ref|YP_447476.1|	-	0.083	13.1	0.1	0.57	10.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3426)
PMBR	PF09373.10	gi|84489245|ref|YP_447477.1|	-	2.1e-18	65.5	2.8	5.4e-09	35.8	0.1	2.1	2	0	0	2	2	2	2	Pseudomurein-binding	repeat
Tir_receptor_M	PF03549.14	gi|84489245|ref|YP_447477.1|	-	0.0071	16.7	0.1	0.0087	16.4	0.1	1.2	1	0	0	1	1	1	1	Translocated	intimin	receptor	(Tir)	intimin-binding	domain
HD	PF01966.22	gi|84489246|ref|YP_447478.1|	-	2.7e-16	59.9	0.4	5.2e-16	59.0	0.4	1.5	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|84489246|ref|YP_447478.1|	-	8.7e-05	22.1	0.0	0.00015	21.3	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
RPAP1_N	PF08621.10	gi|84489246|ref|YP_447478.1|	-	0.23	11.3	2.0	1.8	8.4	0.1	2.7	3	0	0	3	3	3	0	RPAP1-like,	N-terminal
CTP_transf_like	PF01467.26	gi|84489247|ref|YP_447479.1|	-	8.1e-15	55.3	0.0	1.1e-14	54.8	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase-like
ATP-sulfurylase	PF01747.17	gi|84489247|ref|YP_447479.1|	-	0.1	12.1	0.0	7.3	6.0	0.0	2.2	2	0	0	2	2	2	0	ATP-sulfurylase
CbiZ	PF01955.18	gi|84489248|ref|YP_447480.1|	-	6.8e-59	199.2	1.0	8.4e-59	198.9	1.0	1.1	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
Usp	PF00582.26	gi|84489249|ref|YP_447481.1|	-	1.1e-20	74.6	0.0	2.6e-20	73.4	0.0	1.5	1	1	0	1	1	1	1	Universal	stress	protein	family
Bac_thur_toxin	PF01338.18	gi|84489249|ref|YP_447481.1|	-	0.0057	16.1	0.4	0.0067	15.9	0.4	1.2	1	0	0	1	1	1	1	Bacillus	thuringiensis	toxin
AP_endonuc_2	PF01261.24	gi|84489249|ref|YP_447481.1|	-	0.012	15.0	0.0	0.014	14.8	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
DUF3877	PF12993.7	gi|84489249|ref|YP_447481.1|	-	0.048	13.5	0.1	0.057	13.3	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
PSD1	PF07587.11	gi|84489249|ref|YP_447481.1|	-	0.18	11.3	0.0	0.21	11.0	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1553)
ABC_tran	PF00005.27	gi|84489250|ref|YP_447482.1|	-	5.1e-59	198.7	0.1	8.2e-28	97.6	0.0	2.9	2	1	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|84489250|ref|YP_447482.1|	-	1.1e-10	41.3	1.5	0.0005	19.6	0.0	4.0	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|84489250|ref|YP_447482.1|	-	1.4e-09	38.2	7.6	0.068	13.0	0.7	4.5	5	0	0	5	5	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|84489250|ref|YP_447482.1|	-	4.6e-08	33.4	0.1	0.032	14.5	0.0	3.7	3	0	0	3	3	3	2	AAA	domain
RsgA_GTPase	PF03193.16	gi|84489250|ref|YP_447482.1|	-	1.6e-07	31.4	1.5	0.0047	16.9	0.1	2.8	3	0	0	3	3	3	2	RsgA	GTPase
AAA_29	PF13555.6	gi|84489250|ref|YP_447482.1|	-	2.6e-06	27.1	0.9	0.03	14.0	0.1	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|84489250|ref|YP_447482.1|	-	5e-05	23.9	0.3	0.3	11.6	0.1	3.3	2	1	1	3	3	3	2	AAA	domain
AAA_30	PF13604.6	gi|84489250|ref|YP_447482.1|	-	7.7e-05	22.5	0.0	0.55	9.9	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
Zeta_toxin	PF06414.12	gi|84489250|ref|YP_447482.1|	-	9.8e-05	21.7	0.1	0.23	10.7	0.0	3.3	3	1	0	3	3	3	2	Zeta	toxin
AAA_16	PF13191.6	gi|84489250|ref|YP_447482.1|	-	0.00013	22.4	0.0	0.2	12.0	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
cobW	PF02492.19	gi|84489250|ref|YP_447482.1|	-	0.00016	21.3	0.5	0.011	15.4	0.0	2.9	3	0	0	3	3	3	1	CobW/HypB/UreG,	nucleotide-binding	domain
ATP-synt_ab	PF00006.25	gi|84489250|ref|YP_447482.1|	-	0.00026	20.7	0.1	0.18	11.5	0.0	2.5	2	1	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATPase_2	PF01637.18	gi|84489250|ref|YP_447482.1|	-	0.00027	20.9	0.1	0.18	11.7	0.0	2.7	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
TniB	PF05621.11	gi|84489250|ref|YP_447482.1|	-	0.0011	18.4	6.2	0.23	10.8	0.0	4.1	5	0	0	5	5	4	1	Bacterial	TniB	protein
PSY3	PF16836.5	gi|84489250|ref|YP_447482.1|	-	0.0014	18.2	0.0	0.18	11.3	0.0	3.0	3	0	0	3	3	3	1	Shu	complex	component	Psy3,	DNA-binding	description
AAA_23	PF13476.6	gi|84489250|ref|YP_447482.1|	-	0.0015	19.1	10.1	0.084	13.4	0.5	3.2	3	1	0	3	3	2	2	AAA	domain
SbcCD_C	PF13558.6	gi|84489250|ref|YP_447482.1|	-	0.0032	17.7	0.2	0.53	10.6	0.0	3.5	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
NB-ARC	PF00931.22	gi|84489250|ref|YP_447482.1|	-	0.0067	15.6	0.1	2.7	7.1	0.0	2.6	2	0	0	2	2	2	1	NB-ARC	domain
AAA_33	PF13671.6	gi|84489250|ref|YP_447482.1|	-	0.0088	16.2	0.0	3.2	7.9	0.0	2.8	3	0	0	3	3	3	1	AAA	domain
Rad17	PF03215.15	gi|84489250|ref|YP_447482.1|	-	0.0096	15.9	0.0	3.7	7.4	0.0	2.8	3	0	0	3	3	3	1	Rad17	P-loop	domain
IstB_IS21	PF01695.17	gi|84489250|ref|YP_447482.1|	-	0.015	15.0	0.1	11	5.7	0.0	3.5	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
T2SSE	PF00437.20	gi|84489250|ref|YP_447482.1|	-	0.019	14.1	0.1	0.16	11.0	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.6	gi|84489250|ref|YP_447482.1|	-	0.021	14.9	0.8	12	5.9	0.0	3.4	2	1	1	3	3	3	0	AAA	domain
AAA	PF00004.29	gi|84489250|ref|YP_447482.1|	-	0.033	14.6	2.4	4.3	7.8	0.1	3.9	4	1	0	4	4	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.23	gi|84489250|ref|YP_447482.1|	-	0.035	14.2	2.6	1.7	8.8	1.3	3.7	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
PhoH	PF02562.16	gi|84489250|ref|YP_447482.1|	-	0.035	13.5	0.0	0.34	10.3	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
AAA_5	PF07728.14	gi|84489250|ref|YP_447482.1|	-	0.075	13.0	0.0	3.3	7.7	0.0	3.2	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
PRK	PF00485.18	gi|84489250|ref|YP_447482.1|	-	0.081	12.6	0.0	2.5	7.8	0.0	2.6	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_28	PF13521.6	gi|84489250|ref|YP_447482.1|	-	0.097	12.9	0.0	16	5.7	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
DEAD	PF00270.29	gi|84489250|ref|YP_447482.1|	-	0.12	12.1	0.1	3.2	7.5	0.0	2.9	3	0	0	3	3	3	0	DEAD/DEAH	box	helicase
AAA_19	PF13245.6	gi|84489250|ref|YP_447482.1|	-	0.13	12.6	2.8	0.41	11.0	0.3	3.0	3	1	1	4	4	4	0	AAA	domain
AAA_24	PF13479.6	gi|84489250|ref|YP_447482.1|	-	0.15	11.8	1.0	22	4.7	0.0	3.3	4	0	0	4	4	4	0	AAA	domain
DUF87	PF01935.17	gi|84489250|ref|YP_447482.1|	-	2.3	8.2	9.5	10	6.2	0.2	3.5	3	1	0	3	3	3	0	Helicase	HerA,	central	domain
Big_3_5	PF16640.5	gi|84489251|ref|YP_447483.1|	-	1.3e-59	198.4	106.7	1.1e-11	44.8	0.5	11.7	12	0	0	12	12	12	10	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|84489251|ref|YP_447483.1|	-	3e-08	33.8	97.6	0.0048	17.2	0.3	12.0	9	3	2	11	11	11	6	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|84489251|ref|YP_447483.1|	-	4.9e-08	33.1	6.0	6.8e-07	29.5	0.2	11.2	10	2	0	10	10	10	2	Carboxypeptidase	regulatory-like	domain
DUF2782	PF11191.8	gi|84489251|ref|YP_447483.1|	-	8.4e-07	29.1	8.7	27	5.1	0.1	6.8	6	0	0	6	6	6	0	Protein	of	unknown	function	(DUF2782)
Big_1	PF02369.16	gi|84489251|ref|YP_447483.1|	-	2.6e-05	24.1	10.4	0.0048	16.9	0.1	11.2	12	1	0	12	12	12	5	Bacterial	Ig-like	domain	(group	1)
YtkA	PF13115.6	gi|84489251|ref|YP_447483.1|	-	4e-05	24.1	48.2	0.0033	18.0	0.8	10.3	11	0	0	11	11	11	6	YtkA-like
MG2	PF01835.19	gi|84489251|ref|YP_447483.1|	-	0.0022	18.4	3.7	0.089	13.3	0.0	4.8	3	0	0	3	3	3	1	MG2	domain
Phage_TAC_9	PF10876.8	gi|84489251|ref|YP_447483.1|	-	0.012	15.6	0.3	0.035	14.2	0.3	1.7	1	0	0	1	1	1	0	Phage	tail	assemb.y	chaperone	protein,	TAC
DUF5484	PF17583.2	gi|84489251|ref|YP_447483.1|	-	0.026	14.2	19.2	28	4.5	0.4	9.6	8	0	0	8	8	8	0	Family	of	unknown	function	(DUF5484)
Peptidase_S49_N	PF08496.10	gi|84489251|ref|YP_447483.1|	-	4.8	7.2	9.2	5.2	7.1	7.4	1.9	1	1	1	2	2	2	0	Peptidase	family	S49	N-terminal
Glycos_transf_2	PF00535.26	gi|84489252|ref|YP_447484.1|	-	1.2e-31	109.8	0.3	2.5e-31	108.8	0.3	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489252|ref|YP_447484.1|	-	9.6e-15	54.8	0.6	9.6e-15	54.8	0.6	1.8	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489252|ref|YP_447484.1|	-	3.8e-10	40.0	0.0	5.7e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489252|ref|YP_447484.1|	-	0.00059	20.3	0.1	0.0012	19.3	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.26	gi|84489253|ref|YP_447485.1|	-	6.7e-35	120.4	1.9	1.1e-34	119.7	1.9	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489253|ref|YP_447485.1|	-	1.6e-12	47.9	0.0	2.7e-12	47.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489253|ref|YP_447485.1|	-	2.4e-12	46.9	2.2	3.7e-12	46.3	2.2	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489253|ref|YP_447485.1|	-	0.0028	18.1	0.1	0.0068	16.9	0.1	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
YmcE_antitoxin	PF15939.5	gi|84489253|ref|YP_447485.1|	-	0.84	9.8	3.4	5	7.4	0.2	3.0	3	0	0	3	3	3	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system
ATP-cone	PF03477.16	gi|84489254|ref|YP_447486.1|	-	4.7e-06	27.1	2.6	5.9e-06	26.8	0.1	2.4	3	0	0	3	3	3	1	ATP	cone	domain
AAA_18	PF13238.6	gi|84489254|ref|YP_447486.1|	-	0.001	19.6	0.1	0.0059	17.2	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|84489254|ref|YP_447486.1|	-	0.028	13.7	0.0	0.13	11.5	0.0	2.0	2	0	0	2	2	2	0	Zeta	toxin
PRK	PF00485.18	gi|84489254|ref|YP_447486.1|	-	0.27	11.0	1.8	2.3	7.9	1.8	2.2	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Rubredoxin	PF00301.20	gi|84489255|ref|YP_447487.1|	-	2e-19	69.3	1.0	2.2e-19	69.2	1.0	1.0	1	0	0	1	1	1	1	Rubredoxin
zf-C2H2_4	PF13894.6	gi|84489255|ref|YP_447487.1|	-	0.0026	18.5	0.7	0.28	12.1	0.1	2.2	2	0	0	2	2	2	1	C2H2-type	zinc	finger
Zn-ribbon_8	PF09723.10	gi|84489255|ref|YP_447487.1|	-	0.0034	17.5	0.5	0.018	15.1	0.5	1.9	1	1	0	1	1	1	1	Zinc	ribbon	domain
PHD_4	PF16866.5	gi|84489255|ref|YP_447487.1|	-	0.011	15.8	2.1	0.044	13.9	2.1	1.8	1	1	0	1	1	1	0	PHD-finger
zf-nanos	PF05741.13	gi|84489255|ref|YP_447487.1|	-	0.012	15.8	0.9	4.9	7.5	0.1	2.3	2	1	0	2	2	2	0	Nanos	RNA	binding	domain
zf-H2C2_2	PF13465.6	gi|84489255|ref|YP_447487.1|	-	0.029	14.8	0.7	9.8	6.8	0.0	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-Sec23_Sec24	PF04810.15	gi|84489255|ref|YP_447487.1|	-	0.05	13.7	0.2	0.46	10.6	0.0	2.0	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zf-C2H2	PF00096.26	gi|84489255|ref|YP_447487.1|	-	0.078	13.5	2.1	0.86	10.2	0.2	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Rad50_zn_hook	PF04423.14	gi|84489255|ref|YP_447487.1|	-	0.092	12.6	0.4	5.8	6.8	0.1	2.1	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-Mss51	PF13824.6	gi|84489255|ref|YP_447487.1|	-	0.37	10.9	2.0	5.3	7.2	0.1	2.1	1	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Desulfoferrod_N	PF06397.12	gi|84489255|ref|YP_447487.1|	-	0.51	10.0	3.7	0.66	9.6	0.2	2.3	2	1	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Rubredoxin	PF00301.20	gi|84489256|ref|YP_447488.1|	-	2.8e-23	81.7	5.3	3.1e-23	81.5	5.3	1.0	1	0	0	1	1	1	1	Rubredoxin
PHD_4	PF16866.5	gi|84489256|ref|YP_447488.1|	-	0.0024	17.9	0.9	0.0032	17.5	0.9	1.3	1	1	0	1	1	1	1	PHD-finger
Zn-ribbon_8	PF09723.10	gi|84489256|ref|YP_447488.1|	-	0.0086	16.2	0.6	0.089	12.9	0.6	2.0	1	1	0	1	1	1	1	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|84489256|ref|YP_447488.1|	-	0.011	15.5	0.7	0.31	10.8	0.0	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|84489256|ref|YP_447488.1|	-	0.014	14.9	1.5	0.28	10.7	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-C2H2	PF00096.26	gi|84489256|ref|YP_447488.1|	-	0.034	14.6	1.5	6.1	7.5	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-BED	PF02892.15	gi|84489256|ref|YP_447488.1|	-	0.042	13.9	0.2	3.5	7.7	0.1	2.1	2	0	0	2	2	2	0	BED	zinc	finger
ADK_lid	PF05191.14	gi|84489256|ref|YP_447488.1|	-	0.062	13.3	0.4	0.22	11.5	0.4	1.8	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-ribbon_3	PF13248.6	gi|84489256|ref|YP_447488.1|	-	0.081	12.4	0.8	0.081	12.4	0.8	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_4	PF13894.6	gi|84489256|ref|YP_447488.1|	-	0.089	13.7	1.4	12	7.1	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
TFIIS_C	PF01096.18	gi|84489256|ref|YP_447488.1|	-	0.093	12.6	3.1	0.41	10.5	0.1	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-Di19	PF05605.12	gi|84489256|ref|YP_447488.1|	-	0.13	12.6	0.5	0.37	11.1	0.1	1.8	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-H2C2_2	PF13465.6	gi|84489256|ref|YP_447488.1|	-	0.15	12.6	1.0	6	7.5	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.7	gi|84489256|ref|YP_447488.1|	-	0.16	11.9	2.1	0.28	11.2	0.0	1.9	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-C2H2_3	PF13878.6	gi|84489256|ref|YP_447488.1|	-	0.23	11.3	1.0	1	9.3	0.2	2.0	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-RanBP	PF00641.18	gi|84489256|ref|YP_447488.1|	-	0.59	9.5	4.0	0.67	9.3	0.6	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Fe_dep_repr_C	PF02742.15	gi|84489257|ref|YP_447489.1|	-	2.8e-27	94.6	0.3	5.9e-27	93.6	0.1	1.7	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.19	gi|84489257|ref|YP_447489.1|	-	4.5e-20	71.6	2.7	6.9e-20	71.0	2.7	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
FeoA	PF04023.14	gi|84489257|ref|YP_447489.1|	-	1e-10	41.7	0.0	2e-10	40.8	0.0	1.5	1	0	0	1	1	1	1	FeoA	domain
HTH_5	PF01022.20	gi|84489257|ref|YP_447489.1|	-	2.8e-06	27.1	0.1	1.6e-05	24.7	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|84489257|ref|YP_447489.1|	-	2.9e-06	26.7	0.0	1e-05	25.0	0.0	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|84489257|ref|YP_447489.1|	-	1.3e-05	25.0	0.0	3.2e-05	23.8	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_45	PF14947.6	gi|84489257|ref|YP_447489.1|	-	0.00012	22.0	0.8	0.00026	20.9	0.7	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.7	gi|84489257|ref|YP_447489.1|	-	0.00035	20.4	0.0	0.00068	19.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|84489257|ref|YP_447489.1|	-	0.00066	19.5	0.2	0.0015	18.4	0.2	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.9	gi|84489257|ref|YP_447489.1|	-	0.00088	19.3	1.6	0.012	15.7	0.6	2.5	2	1	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_IclR	PF09339.10	gi|84489257|ref|YP_447489.1|	-	0.0023	17.7	0.0	0.0052	16.5	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_27	PF13463.6	gi|84489257|ref|YP_447489.1|	-	0.0024	18.3	0.1	0.007	16.8	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_12	PF08461.10	gi|84489257|ref|YP_447489.1|	-	0.0034	17.3	0.0	0.0067	16.3	0.0	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Rrf2	PF02082.20	gi|84489257|ref|YP_447489.1|	-	0.01	16.2	0.0	0.022	15.1	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_Crp_2	PF13545.6	gi|84489257|ref|YP_447489.1|	-	0.011	15.7	0.0	0.025	14.6	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
BLACT_WH	PF17778.1	gi|84489257|ref|YP_447489.1|	-	0.015	15.3	0.0	0.061	13.3	0.0	2.0	2	0	0	2	2	2	0	Beta-lactamase	associated	winged	helix	domain
HTH_34	PF13601.6	gi|84489257|ref|YP_447489.1|	-	0.037	14.2	0.1	0.08	13.1	0.1	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|84489257|ref|YP_447489.1|	-	0.041	13.9	1.0	0.81	9.7	1.0	2.4	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HrcA_DNA-bdg	PF03444.15	gi|84489257|ref|YP_447489.1|	-	0.06	13.0	0.1	0.12	12.0	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
LexA_DNA_bind	PF01726.16	gi|84489257|ref|YP_447489.1|	-	0.15	11.9	0.0	0.3	10.9	0.0	1.6	1	0	0	1	1	1	0	LexA	DNA	binding	domain
AMP-binding	PF00501.28	gi|84489258|ref|YP_447490.1|	-	7.5e-87	291.6	0.0	9.6e-87	291.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|84489258|ref|YP_447490.1|	-	1.4e-12	48.4	0.5	6e-12	46.4	0.2	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Polysacc_synt	PF01943.17	gi|84489259|ref|YP_447491.1|	-	2.1e-37	129.0	43.6	2.1e-37	129.0	43.6	2.9	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|84489259|ref|YP_447491.1|	-	2.4e-20	73.1	29.9	2.4e-20	73.1	29.9	4.3	3	2	1	4	4	4	1	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.6	gi|84489259|ref|YP_447491.1|	-	3.6e-16	59.3	27.3	3.6e-16	59.3	27.3	2.8	1	1	2	3	3	3	1	Polysaccharide	biosynthesis	protein
MurJ	PF03023.14	gi|84489259|ref|YP_447491.1|	-	0.77	8.3	61.2	0.032	12.8	53.9	1.9	1	1	1	2	2	2	0	Lipid	II	flippase	MurJ
PALP	PF00291.25	gi|84489260|ref|YP_447492.1|	-	1.8e-64	218.0	0.6	2e-64	217.8	0.6	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ADH_zinc_N	PF00107.26	gi|84489260|ref|YP_447492.1|	-	0.011	15.7	0.0	0.03	14.3	0.0	1.7	1	1	0	1	1	1	0	Zinc-binding	dehydrogenase
Hexapep	PF00132.24	gi|84489261|ref|YP_447493.1|	-	1.7e-14	52.9	15.3	2.5e-10	39.6	6.6	2.9	2	1	1	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|84489261|ref|YP_447493.1|	-	1.2e-09	37.7	18.9	9.8e-09	34.8	8.3	2.8	2	1	0	2	2	2	2	Hexapeptide	repeat	of	succinyl-transferase
SATase_N	PF06426.14	gi|84489261|ref|YP_447493.1|	-	0.0011	19.3	0.0	0.0027	18.1	0.0	1.6	2	0	0	2	2	2	1	Serine	acetyltransferase,	N-terminal
Class_IIIsignal	PF04021.12	gi|84489262|ref|YP_447494.1|	-	1.9e-06	27.7	1.1	3e-06	27.0	1.1	1.3	1	0	0	1	1	1	1	Class	III	signal	peptide
Orthopox_B11R	PF07033.11	gi|84489262|ref|YP_447494.1|	-	0.15	11.8	3.3	0.073	12.9	1.0	1.6	2	0	0	2	2	2	0	Orthopoxvirus	B11R	protein
Pico_P2A	PF00947.19	gi|84489262|ref|YP_447494.1|	-	2.7	8.0	6.0	0.41	10.7	0.7	1.9	1	1	1	2	2	2	0	Picornavirus	core	protein	2A
Peptidase_A24	PF01478.18	gi|84489263|ref|YP_447495.1|	-	4.1e-08	33.6	25.2	4e-07	30.4	25.1	2.7	1	1	0	1	1	1	1	Type	IV	leader	peptidase	family
Arc_PepC	PF06819.11	gi|84489263|ref|YP_447495.1|	-	0.00039	20.5	0.0	0.00073	19.6	0.0	1.4	1	0	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminal	Domain
RHD3	PF05879.12	gi|84489263|ref|YP_447495.1|	-	2.8	5.9	4.7	4	5.5	4.7	1.1	1	0	0	1	1	1	0	Root	hair	defective	3	GTP-binding	protein	(RHD3)
CTP_synth_N	PF06418.14	gi|84489264|ref|YP_447496.1|	-	2.1e-125	417.4	1.3	2.8e-125	417.0	1.3	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|84489264|ref|YP_447496.1|	-	3.9e-55	186.6	0.0	6.6e-55	185.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|84489264|ref|YP_447496.1|	-	2.4e-12	47.1	0.0	7.1e-11	42.3	0.0	2.4	2	1	0	2	2	2	1	Peptidase	C26
DJ-1_PfpI	PF01965.24	gi|84489264|ref|YP_447496.1|	-	0.00053	19.8	0.0	0.0014	18.5	0.0	1.7	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.14	gi|84489264|ref|YP_447496.1|	-	0.0019	17.8	0.1	0.0037	16.9	0.1	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.19	gi|84489264|ref|YP_447496.1|	-	0.011	15.5	0.1	0.54	10.1	0.0	2.4	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
CbiA	PF01656.23	gi|84489264|ref|YP_447496.1|	-	0.012	15.7	0.0	0.024	14.7	0.0	1.6	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
EcoR124_C	PF12008.8	gi|84489265|ref|YP_447497.1|	-	1.4e-54	185.5	31.8	1.4e-54	185.5	31.8	2.5	2	1	0	2	2	2	1	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
Methylase_S	PF01420.19	gi|84489266|ref|YP_447498.1|	-	1.7e-22	80.4	10.4	1.9e-22	80.2	10.4	1.0	1	0	0	1	1	1	1	Type	I	restriction	modification	DNA	specificity	domain
Big_3_5	PF16640.5	gi|84489267|ref|YP_447499.1|	-	1.4e-11	44.4	44.8	5.4e-08	32.9	9.8	3.2	2	1	1	3	3	3	3	Bacterial	Ig-like	domain	(group	3)
CBM60	PF16841.5	gi|84489267|ref|YP_447499.1|	-	1.5e-05	25.3	9.2	7.9e-05	23.0	0.4	3.2	2	1	0	3	3	3	2	Ca-dependent	carbohydrate-binding	module	xylan-binding
CE2_N	PF17996.1	gi|84489267|ref|YP_447499.1|	-	0.045	13.7	4.0	0.09	12.8	0.1	2.8	1	1	2	3	3	3	0	Carbohydrate	esterase	2	N-terminal
CNP1	PF08750.11	gi|84489267|ref|YP_447499.1|	-	0.16	11.9	2.2	0.22	11.5	0.1	2.3	2	2	1	3	3	3	0	CNP1-like	family
DUF5462	PF17547.2	gi|84489267|ref|YP_447499.1|	-	0.24	10.8	4.2	0.55	9.6	0.1	2.9	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5462)
DUF4468	PF14730.6	gi|84489267|ref|YP_447499.1|	-	2.4	8.5	13.9	3.4	8.0	1.5	3.4	3	2	0	3	3	3	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
KH_dom-like	PF14714.6	gi|84489268|ref|YP_447500.1|	-	0.047	14.0	0.1	0.06	13.7	0.1	1.3	1	0	0	1	1	1	0	KH-domain-like	of	EngA	bacterial	GTPase	enzymes,	C-terminal
Exo_endo_phos_2	PF14529.6	gi|84489269|ref|YP_447501.1|	-	0.00089	19.1	0.0	0.0012	18.6	0.0	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
Exo_endo_phos	PF03372.23	gi|84489269|ref|YP_447501.1|	-	0.02	14.4	0.0	0.041	13.4	0.0	1.5	1	1	0	1	1	1	0	Endonuclease/Exonuclease/phosphatase	family
TPR_MLP1_2	PF07926.12	gi|84489270|ref|YP_447502.1|	-	0.051	13.6	0.6	7.1	6.7	0.3	2.4	1	1	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
SHD1	PF03983.12	gi|84489270|ref|YP_447502.1|	-	0.071	12.9	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	SLA1	homology	domain	1,	SHD1
WEMBL	PF05701.11	gi|84489271|ref|YP_447503.1|	-	0.0063	15.3	6.7	0.0078	15.0	6.7	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF4795	PF16043.5	gi|84489271|ref|YP_447503.1|	-	0.015	14.9	6.5	0.025	14.2	6.5	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
HAUS-augmin3	PF14932.6	gi|84489271|ref|YP_447503.1|	-	0.021	14.4	3.8	0.025	14.2	3.8	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
TMF_TATA_bd	PF12325.8	gi|84489271|ref|YP_447503.1|	-	0.04	14.1	7.5	0.071	13.3	7.5	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
Latarcin	PF10279.9	gi|84489271|ref|YP_447503.1|	-	5.1	7.6	8.1	33	5.0	8.1	2.3	1	1	0	1	1	1	0	Latarcin	precursor
MazE_antitoxin	PF04014.18	gi|84489272|ref|YP_447504.1|	-	0.00056	19.8	1.3	0.0056	16.6	0.2	2.4	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PrlF_antitoxin	PF15937.5	gi|84489272|ref|YP_447504.1|	-	0.011	16.2	0.2	0.51	10.8	0.0	2.1	1	1	0	2	2	2	0	prlF	antitoxin	for	toxin	YhaV_toxin
Ribosomal_S4e	PF00900.20	gi|84489272|ref|YP_447504.1|	-	0.016	15.1	0.2	0.029	14.3	0.2	1.4	1	0	0	1	1	1	0	Ribosomal	family	S4e
HTH_AsnC-type	PF13404.6	gi|84489273|ref|YP_447505.1|	-	7.6e-07	28.9	0.1	1.1e-06	28.3	0.1	1.2	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|84489273|ref|YP_447505.1|	-	0.0001	21.8	0.8	0.0001	21.8	0.8	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_38	PF13936.6	gi|84489273|ref|YP_447505.1|	-	0.00044	20.0	0.2	0.00097	18.9	0.1	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
PRESAN	PF09687.10	gi|84489273|ref|YP_447505.1|	-	0.0069	16.9	1.2	0.0081	16.7	1.2	1.3	1	1	0	1	1	1	1	Plasmodium	RESA	N-terminal
YkyA	PF10368.9	gi|84489273|ref|YP_447505.1|	-	0.008	15.9	5.2	0.0091	15.7	5.2	1.1	1	0	0	1	1	1	1	Putative	cell-wall	binding	lipoprotein
DUF1318	PF07027.12	gi|84489273|ref|YP_447505.1|	-	0.052	14.0	0.2	0.065	13.7	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1318)
RIC1	PF07064.13	gi|84489273|ref|YP_447505.1|	-	0.067	12.6	0.2	0.08	12.3	0.2	1.1	1	0	0	1	1	1	0	RIC1
AsnC_trans_reg	PF01037.21	gi|84489273|ref|YP_447505.1|	-	0.07	13.1	0.1	0.11	12.5	0.1	1.3	1	0	0	1	1	1	0	Lrp/AsnC	ligand	binding	domain
Borealin	PF10512.9	gi|84489273|ref|YP_447505.1|	-	0.083	12.9	0.2	0.11	12.4	0.2	1.2	1	0	0	1	1	1	0	Cell	division	cycle-associated	protein	8
HTH_Mga	PF08280.11	gi|84489274|ref|YP_447506.1|	-	0.012	15.7	1.0	0.026	14.5	0.4	1.9	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
UPF0113_N	PF17833.1	gi|84489274|ref|YP_447506.1|	-	0.52	10.9	7.7	8.1	7.1	7.7	2.5	1	1	0	1	1	1	0	UPF0113	Pre-PUA	domain
DUF2971	PF11185.8	gi|84489275|ref|YP_447507.1|	-	1.1e-08	36.1	4.2	1.1e-08	36.1	4.2	4.2	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF2971)
SEC-C	PF02810.15	gi|84489276|ref|YP_447508.1|	-	2.1e-08	33.9	12.6	4.7e-08	32.8	12.6	1.7	1	0	0	1	1	1	1	SEC-C	motif
DUF234	PF03008.14	gi|84489276|ref|YP_447508.1|	-	0.28	11.7	5.9	0.1	13.0	0.6	3.2	3	0	0	3	3	3	0	Archaea	bacterial	proteins	of	unknown	function
CD45	PF12567.8	gi|84489276|ref|YP_447508.1|	-	3.1	7.9	8.1	3.6	7.6	0.6	3.7	3	0	0	3	3	3	0	Leukocyte	receptor	CD45
DUF1802	PF08819.11	gi|84489277|ref|YP_447509.1|	-	2.9e-29	102.1	0.0	3.4e-29	101.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1802)
DUF1659	PF07872.11	gi|84489277|ref|YP_447509.1|	-	0.45	10.2	2.6	6	6.6	0.2	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1659)
SNF2_N	PF00176.23	gi|84489278|ref|YP_447510.1|	-	3.4e-07	29.3	0.0	5.3e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
ResIII	PF04851.15	gi|84489278|ref|YP_447510.1|	-	1.1e-06	28.8	3.0	7.8e-06	26.0	0.0	2.7	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
AAA_10	PF12846.7	gi|84489278|ref|YP_447510.1|	-	0.0072	15.3	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	AAA-like	domain
Helicase_C	PF00271.31	gi|84489279|ref|YP_447511.1|	-	1.7e-15	57.3	0.8	1.7e-15	57.3	0.8	3.3	3	1	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|84489279|ref|YP_447511.1|	-	1.8e-07	31.1	2.7	0.00016	21.5	0.0	3.4	4	1	0	4	4	4	2	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|84489279|ref|YP_447511.1|	-	0.013	15.5	0.0	0.013	15.5	0.0	3.6	4	0	0	4	4	4	0	Type	III	restriction	enzyme,	res	subunit
Cortex-I_coil	PF09304.10	gi|84489279|ref|YP_447511.1|	-	0.1	12.8	9.7	0.032	14.4	5.1	2.6	2	0	0	2	2	2	0	Cortexillin	I,	coiled	coil
Prok-TraM	PF09228.10	gi|84489279|ref|YP_447511.1|	-	0.14	12.5	0.1	0.14	12.5	0.1	2.6	3	0	0	3	3	3	0	Prokaryotic	Transcriptional	repressor	TraM
Aida_N	PF08910.10	gi|84489279|ref|YP_447511.1|	-	0.17	12.3	7.5	1.6	9.2	0.0	4.3	4	1	0	4	4	4	0	Aida	N-terminus
Sec2p	PF06428.11	gi|84489279|ref|YP_447511.1|	-	0.45	10.5	12.5	1	9.3	5.2	3.2	2	0	0	2	2	2	0	GDP/GTP	exchange	factor	Sec2p
DUF2524	PF10732.9	gi|84489279|ref|YP_447511.1|	-	8.5	6.8	10.0	11	6.4	0.7	3.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2524)
DUF4391	PF14335.6	gi|84489280|ref|YP_447512.1|	-	2.3e-60	204.3	17.6	2.7e-60	204.1	17.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4391)
DNA_repr_REX1B	PF14966.6	gi|84489280|ref|YP_447512.1|	-	1.3	9.8	6.2	0.27	11.9	2.1	2.0	2	0	0	2	2	2	0	DNA	repair	REX1-B
N6_N4_Mtase	PF01555.18	gi|84489281|ref|YP_447513.1|	-	4.6e-23	82.2	3.8	7.3e-23	81.5	3.8	1.4	1	0	0	1	1	1	1	DNA	methylase
Cons_hypoth95	PF03602.15	gi|84489281|ref|YP_447513.1|	-	0.12	12.1	0.1	0.26	10.9	0.1	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Vinculin	PF01044.19	gi|84489281|ref|YP_447513.1|	-	0.28	9.4	0.0	1.6	6.8	0.0	1.9	2	0	0	2	2	2	0	Vinculin	family
zf-CHY	PF05495.12	gi|84489282|ref|YP_447514.1|	-	0.02	15.4	2.9	0.057	13.9	2.9	1.7	1	0	0	1	1	1	0	CHY	zinc	finger
Cytochrome_C7	PF14522.6	gi|84489282|ref|YP_447514.1|	-	0.023	14.7	3.4	0.067	13.2	3.4	1.7	1	0	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
HTH_40	PF14493.6	gi|84489282|ref|YP_447514.1|	-	0.081	13.4	8.6	0.03	14.8	2.9	3.2	2	1	1	3	3	3	0	Helix-turn-helix	domain
Zn-ribbon_8	PF09723.10	gi|84489282|ref|YP_447514.1|	-	0.094	12.9	1.6	3.1	8.0	0.2	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
DDE_Tnp_IS240	PF13610.6	gi|84489282|ref|YP_447514.1|	-	0.23	11.7	14.6	0.014	15.6	6.8	2.9	2	2	1	3	3	3	0	DDE	domain
CpXC	PF14353.6	gi|84489282|ref|YP_447514.1|	-	0.37	10.8	4.9	0.95	9.5	3.3	2.5	2	1	0	2	2	2	0	CpXC	protein
zf-ISL3	PF14690.6	gi|84489282|ref|YP_447514.1|	-	1.5	9.5	13.4	6.4	7.5	13.4	2.1	1	1	0	1	1	1	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-3CxxC	PF13695.6	gi|84489282|ref|YP_447514.1|	-	2.3	8.7	8.8	0.51	10.8	1.8	3.1	2	1	0	2	2	2	0	Zinc-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|84489282|ref|YP_447514.1|	-	4.8	7.2	11.2	13	5.8	11.2	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
N6_N4_Mtase	PF01555.18	gi|84489283|ref|YP_447515.1|	-	7.7e-07	29.0	0.1	1.8e-06	27.8	0.0	1.7	2	0	0	2	2	2	1	DNA	methylase
ResIII	PF04851.15	gi|84489284|ref|YP_447516.1|	-	3.2e-19	69.6	0.1	3.2e-19	69.6	0.1	2.6	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|84489284|ref|YP_447516.1|	-	2.8e-06	27.2	0.0	7.1e-06	25.9	0.0	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
PhoH	PF02562.16	gi|84489284|ref|YP_447516.1|	-	0.0016	18.0	0.7	0.031	13.7	0.0	2.6	3	0	0	3	3	3	1	PhoH-like	protein
S6PP	PF05116.13	gi|84489284|ref|YP_447516.1|	-	0.0022	17.6	0.1	0.0039	16.7	0.1	1.3	1	0	0	1	1	1	1	Sucrose-6F-phosphate	phosphohydrolase
MH2	PF03166.14	gi|84489284|ref|YP_447516.1|	-	0.077	13.2	0.1	5.9	7.1	0.0	3.0	3	0	0	3	3	3	0	MH2	domain
MotA_ExbB	PF01618.16	gi|84489286|ref|YP_447518.1|	-	0.39	10.5	3.1	0.58	9.9	2.6	1.6	1	1	0	1	1	1	0	MotA/TolQ/ExbB	proton	channel	family
SWI2_SNF2	PF18766.1	gi|84489288|ref|YP_447520.1|	-	1.2e-57	195.2	6.3	1.2e-57	195.2	6.3	2.3	2	0	0	2	2	2	1	SWI2/SNF2	ATPase
EcoR124_C	PF12008.8	gi|84489288|ref|YP_447520.1|	-	3.2e-56	190.9	33.8	3.2e-56	190.9	33.8	4.6	4	2	2	6	6	6	1	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
HSDR_N	PF04313.14	gi|84489288|ref|YP_447520.1|	-	1.6e-33	116.3	6.5	1.6e-33	116.3	6.5	3.4	3	1	0	3	3	3	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
ResIII	PF04851.15	gi|84489288|ref|YP_447520.1|	-	6.9e-33	114.1	5.2	6.9e-33	114.1	5.2	3.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
T2SSE	PF00437.20	gi|84489288|ref|YP_447520.1|	-	0.045	12.8	0.1	0.11	11.6	0.1	1.7	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
TAFII28	PF04719.14	gi|84489288|ref|YP_447520.1|	-	0.16	12.1	2.6	0.53	10.4	0.2	2.5	2	0	0	2	2	2	0	hTAFII28-like	protein	conserved	region
NYD-SP28_assoc	PF14775.6	gi|84489288|ref|YP_447520.1|	-	1.6	8.9	9.9	2	8.6	1.3	3.7	3	0	0	3	3	3	0	Sperm	tail	C-terminal	domain
Retrotrans_gag	PF03732.17	gi|84489288|ref|YP_447520.1|	-	7.1	7.0	12.2	0.1	12.9	0.6	3.9	4	0	0	4	4	4	0	Retrotransposon	gag	protein
Methylase_S	PF01420.19	gi|84489289|ref|YP_447521.1|	-	2.9e-07	30.9	16.5	3.3e-07	30.7	16.5	1.0	1	0	0	1	1	1	1	Type	I	restriction	modification	DNA	specificity	domain
DUF1189	PF06691.11	gi|84489289|ref|YP_447521.1|	-	0.042	13.4	8.2	0.051	13.1	8.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1189)
N6_Mtase	PF02384.16	gi|84489290|ref|YP_447522.1|	-	8.4e-117	389.9	0.8	1.2e-116	389.3	0.8	1.2	1	0	0	1	1	1	1	N-6	DNA	Methylase
HsdM_N	PF12161.8	gi|84489290|ref|YP_447522.1|	-	1.4e-25	90.5	3.5	1.4e-25	90.5	3.5	2.5	2	1	0	2	2	2	1	HsdM	N-terminal	domain
MTS	PF05175.14	gi|84489290|ref|YP_447522.1|	-	6.8e-08	32.2	0.0	5.5e-07	29.3	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	small	domain
Eco57I	PF07669.11	gi|84489290|ref|YP_447522.1|	-	7.9e-05	23.1	0.0	0.0003	21.3	0.0	2.1	1	0	0	1	1	1	1	Eco57I	restriction-modification	methylase
Methyltransf_31	PF13847.6	gi|84489290|ref|YP_447522.1|	-	0.00012	21.9	0.0	0.00027	20.8	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|84489290|ref|YP_447522.1|	-	0.00048	19.9	0.1	0.055	13.1	0.1	2.5	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.6	gi|84489290|ref|YP_447522.1|	-	0.0016	19.1	0.0	0.0087	16.7	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
AviRa	PF11599.8	gi|84489290|ref|YP_447522.1|	-	0.0027	17.2	0.0	0.0057	16.1	0.0	1.5	1	0	0	1	1	1	1	RRNA	methyltransferase	AviRa
PrmA	PF06325.13	gi|84489290|ref|YP_447522.1|	-	0.014	14.8	2.1	0.038	13.4	0.0	2.5	3	0	0	3	3	3	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|84489290|ref|YP_447522.1|	-	0.016	14.8	0.0	0.043	13.5	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DOT1	PF08123.13	gi|84489290|ref|YP_447522.1|	-	0.063	12.8	0.0	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
N6-adenineMlase	PF10237.9	gi|84489290|ref|YP_447522.1|	-	0.067	13.0	0.1	0.19	11.5	0.0	1.8	2	0	0	2	2	2	0	Probable	N6-adenine	methyltransferase
Methyltransf_12	PF08242.12	gi|84489290|ref|YP_447522.1|	-	0.65	10.8	2.1	1.9	9.3	0.0	2.7	3	0	0	3	3	3	0	Methyltransferase	domain
Methylase_S	PF01420.19	gi|84489291|ref|YP_447523.1|	-	1.7e-22	80.5	24.7	9.6e-21	74.7	7.6	2.6	2	1	0	2	2	2	2	Type	I	restriction	modification	DNA	specificity	domain
Methylase_S	PF01420.19	gi|84489294|ref|YP_447526.1|	-	1.3e-17	64.6	11.0	1.5e-17	64.3	11.0	1.1	1	0	0	1	1	1	1	Type	I	restriction	modification	DNA	specificity	domain
Methylase_S	PF01420.19	gi|84489295|ref|YP_447527.1|	-	8e-23	81.5	31.8	2.1e-21	76.9	15.8	2.6	2	1	0	2	2	2	2	Type	I	restriction	modification	DNA	specificity	domain
Sec34	PF04136.15	gi|84489295|ref|YP_447527.1|	-	0.0073	16.2	1.3	0.56	10.1	0.3	2.4	2	0	0	2	2	2	2	Sec34-like	family
UN_NPL4	PF11543.8	gi|84489295|ref|YP_447527.1|	-	0.02	15.4	0.7	0.81	10.2	0.1	2.6	2	0	0	2	2	2	0	Nuclear	pore	localisation	protein	NPL4
Phage_XkdX	PF09693.10	gi|84489295|ref|YP_447527.1|	-	0.24	11.4	3.7	6.6	6.8	0.3	3.3	2	1	0	2	2	2	0	Phage	uncharacterised	protein	(Phage_XkdX)
PhosphMutase	PF10143.9	gi|84489296|ref|YP_447528.1|	-	8.3e-53	178.7	0.0	1.2e-52	178.3	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|84489296|ref|YP_447528.1|	-	3.2e-39	134.8	0.6	3.8e-39	134.5	0.6	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|84489296|ref|YP_447528.1|	-	0.0039	16.8	0.2	0.062	12.9	0.0	2.1	1	1	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF1768	PF08719.11	gi|84489297|ref|YP_447529.1|	-	1.1e-09	38.8	0.0	1.3e-09	38.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1768)
Homoserine_dh	PF00742.19	gi|84489298|ref|YP_447530.1|	-	9e-55	185.3	1.3	1e-54	185.1	0.4	1.6	2	0	0	2	2	2	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.16	gi|84489298|ref|YP_447530.1|	-	4.6e-09	37.0	0.5	1.2e-08	35.6	0.0	2.0	3	1	0	3	3	3	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.21	gi|84489298|ref|YP_447530.1|	-	9.3e-08	32.1	0.3	3e-07	30.4	0.3	1.9	1	1	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ACT	PF01842.25	gi|84489299|ref|YP_447531.1|	-	6.8e-05	22.6	1.0	0.00055	19.7	0.2	2.5	1	1	1	2	2	2	1	ACT	domain
Glu-tRNAGln	PF02686.15	gi|84489300|ref|YP_447532.1|	-	0.00082	19.6	0.3	0.0011	19.2	0.3	1.1	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
Prefoldin	PF02996.17	gi|84489300|ref|YP_447532.1|	-	0.053	13.4	0.2	0.057	13.3	0.2	1.2	1	0	0	1	1	1	0	Prefoldin	subunit
Cas6_N	PF17952.1	gi|84489300|ref|YP_447532.1|	-	0.097	13.0	0.1	0.17	12.2	0.0	1.4	1	1	0	1	1	1	0	Cas6	N-terminal	domain
Prominin	PF05478.11	gi|84489300|ref|YP_447532.1|	-	0.17	9.8	0.3	0.16	9.9	0.3	1.0	1	0	0	1	1	1	0	Prominin
Vac14_Fig4_bd	PF11916.8	gi|84489300|ref|YP_447532.1|	-	0.17	11.5	0.1	0.17	11.5	0.1	1.1	1	0	0	1	1	1	0	Vacuolar	protein	14	C-terminal	Fig4p	binding
Asn_synthase	PF00733.21	gi|84489301|ref|YP_447533.1|	-	6.7e-48	164.2	0.1	4.7e-27	95.6	0.0	2.1	1	1	1	2	2	2	2	Asparagine	synthase
GATase_7	PF13537.6	gi|84489301|ref|YP_447533.1|	-	1e-24	86.8	0.0	1.9e-24	85.9	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|84489301|ref|YP_447533.1|	-	2.5e-20	73.0	0.0	1.2e-18	67.6	0.0	2.4	2	1	0	2	2	2	1	Glutamine	amidotransferase	domain
NAD_synthase	PF02540.17	gi|84489301|ref|YP_447533.1|	-	0.00043	19.5	0.2	0.00082	18.6	0.2	1.3	1	0	0	1	1	1	1	NAD	synthase
QueC	PF06508.13	gi|84489301|ref|YP_447533.1|	-	0.00075	19.1	0.0	0.0012	18.4	0.0	1.5	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|84489301|ref|YP_447533.1|	-	0.00093	18.1	0.0	0.0021	16.9	0.0	1.6	1	1	0	1	1	1	1	tRNA	methyl	transferase
Hydantoinase_A	PF01968.18	gi|84489301|ref|YP_447533.1|	-	0.076	12.3	0.0	0.15	11.3	0.0	1.4	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase
Flavokinase	PF01687.17	gi|84489301|ref|YP_447533.1|	-	0.081	13.2	0.3	0.28	11.5	0.1	1.9	2	0	0	2	2	2	0	Riboflavin	kinase
DUF5379	PF17350.2	gi|84489302|ref|YP_447534.1|	-	4.1e-06	27.0	8.7	4.9e-06	26.7	8.7	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5379)
Glycos_transf_2	PF00535.26	gi|84489303|ref|YP_447535.1|	-	2.4e-46	157.7	1.8	5.1e-22	78.5	0.1	2.7	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489303|ref|YP_447535.1|	-	5.6e-22	78.8	0.0	1.5e-10	41.4	0.0	2.4	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
DUF616	PF04765.13	gi|84489303|ref|YP_447535.1|	-	5e-15	55.6	10.3	2.9e-14	53.0	8.6	2.6	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF616)
Glycos_transf_1	PF00534.20	gi|84489303|ref|YP_447535.1|	-	5.8e-08	32.5	0.0	5.9e-07	29.2	0.0	2.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84489303|ref|YP_447535.1|	-	4.4e-07	30.1	0.0	1.2e-06	28.6	0.0	1.8	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.6	gi|84489303|ref|YP_447535.1|	-	2.6e-05	24.7	0.0	6.7e-05	23.3	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MGAT2	PF05060.14	gi|84489303|ref|YP_447535.1|	-	0.022	13.8	10.2	0.59	9.1	0.4	3.0	3	1	0	3	3	3	0	N-acetylglucosaminyltransferase	II	(MGAT2)
DpaA_N	PF16924.5	gi|84489303|ref|YP_447535.1|	-	0.18	11.9	0.7	2.8	8.1	0.0	3.1	3	0	0	3	3	3	0	Dipicolinate	synthase	subunit	A	N-terminal	domain
Glycos_transf_2	PF00535.26	gi|84489304|ref|YP_447536.1|	-	1.3e-51	174.7	3.9	5e-32	111.0	0.2	2.4	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489304|ref|YP_447536.1|	-	2.2e-23	83.3	0.0	6.1e-13	49.2	0.0	2.6	2	1	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489304|ref|YP_447536.1|	-	1.5e-16	60.7	5.9	1.8e-15	57.1	1.1	2.6	2	1	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489304|ref|YP_447536.1|	-	0.00025	21.5	0.2	0.026	15.0	0.0	2.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
NTP_transferase	PF00483.23	gi|84489304|ref|YP_447536.1|	-	0.00048	19.8	2.7	0.001	18.7	0.1	2.7	4	0	0	4	4	4	1	Nucleotidyl	transferase
ZapB	PF06005.12	gi|84489305|ref|YP_447537.1|	-	0.035	14.5	33.3	0.19	12.2	10.7	3.8	1	1	2	3	3	3	0	Cell	division	protein	ZapB
Trp_dioxygenase	PF03301.13	gi|84489305|ref|YP_447537.1|	-	0.35	10.2	12.8	0.47	9.7	12.4	1.4	1	1	0	1	1	1	0	Tryptophan	2,3-dioxygenase
TPR_MLP1_2	PF07926.12	gi|84489305|ref|YP_447537.1|	-	0.75	9.9	26.5	2.8	8.0	18.7	2.3	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
NRBF2	PF08961.10	gi|84489305|ref|YP_447537.1|	-	3	7.4	25.5	1.6	8.3	10.2	2.9	1	1	2	3	3	3	0	Nuclear	receptor-binding	factor	2,	autophagy	regulator
Glycos_transf_2	PF00535.26	gi|84489306|ref|YP_447538.1|	-	6.4e-66	221.4	15.1	2.5e-32	112.0	0.7	3.5	3	0	0	3	3	3	3	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489306|ref|YP_447538.1|	-	1.4e-19	70.7	21.8	4.5e-11	42.7	2.9	3.6	3	0	0	3	3	3	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489306|ref|YP_447538.1|	-	4e-18	66.1	0.0	8.1e-09	35.7	0.0	3.0	3	0	0	3	3	3	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489306|ref|YP_447538.1|	-	1.5e-07	31.8	1.9	1.2e-05	25.8	0.2	3.4	3	0	0	3	3	3	1	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.26	gi|84489307|ref|YP_447539.1|	-	3.3e-46	157.2	10.0	2.6e-37	128.2	0.3	3.4	3	0	0	3	3	3	3	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489307|ref|YP_447539.1|	-	9.5e-16	58.4	0.0	6.1e-13	49.2	0.0	3.1	3	0	0	3	3	3	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489307|ref|YP_447539.1|	-	9.8e-16	58.0	1.1	9.8e-16	58.0	1.1	3.7	3	1	1	4	4	4	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489307|ref|YP_447539.1|	-	0.00016	22.2	0.1	0.00067	20.1	0.1	2.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.6	gi|84489307|ref|YP_447539.1|	-	0.067	13.1	0.0	2.4	8.0	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.6	gi|84489307|ref|YP_447539.1|	-	0.14	11.6	0.0	11	5.4	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
HhH-GPD	PF00730.25	gi|84489308|ref|YP_447540.1|	-	2.6e-25	89.0	0.0	3.7e-25	88.5	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|84489308|ref|YP_447540.1|	-	5.7e-12	44.9	0.0	1.8e-11	43.3	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|84489308|ref|YP_447540.1|	-	0.00029	21.4	0.0	0.2	12.3	0.0	2.6	1	1	1	2	2	2	2	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|84489308|ref|YP_447540.1|	-	0.0015	18.6	0.0	0.79	9.9	0.0	2.4	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
DUF2400	PF09674.10	gi|84489308|ref|YP_447540.1|	-	0.005	16.9	0.3	0.029	14.4	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2400)
EndIII_4Fe-2S	PF10576.9	gi|84489308|ref|YP_447540.1|	-	0.015	15.6	1.1	0.03	14.7	1.1	1.5	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
HHH_8	PF14716.6	gi|84489308|ref|YP_447540.1|	-	0.11	12.8	0.0	0.59	10.6	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
EPSP_synthase	PF00275.20	gi|84489309|ref|YP_447541.1|	-	3.6e-122	408.0	0.0	4.1e-122	407.9	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
tRNA-synt_1	PF00133.22	gi|84489310|ref|YP_447542.1|	-	1.6e-150	502.2	3.6	2.1e-149	498.6	3.6	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|84489310|ref|YP_447542.1|	-	5.6e-37	127.1	0.1	1.1e-36	126.0	0.1	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|84489310|ref|YP_447542.1|	-	1.3e-24	86.7	7.9	7.1e-15	54.6	0.1	4.3	3	1	1	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|84489310|ref|YP_447542.1|	-	2.2e-07	30.5	0.0	0.0028	17.1	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.6	gi|84489310|ref|YP_447542.1|	-	6.9e-07	29.0	0.0	5.3e-06	26.1	0.0	2.3	1	1	1	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.18	gi|84489310|ref|YP_447542.1|	-	0.0013	17.8	0.0	0.0066	15.4	0.0	2.2	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(K)
ParE_toxin	PF05016.15	gi|84489310|ref|YP_447542.1|	-	0.049	14.3	0.1	0.27	11.9	0.0	2.3	2	0	0	2	2	2	0	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
Glycos_transf_2	PF00535.26	gi|84489311|ref|YP_447543.1|	-	3.2e-24	85.6	1.1	8.5e-24	84.3	0.5	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489311|ref|YP_447543.1|	-	3.6e-11	43.4	0.0	1.2e-10	41.7	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_1_2	PF13524.6	gi|84489311|ref|YP_447543.1|	-	8.9e-11	42.0	0.0	5.9e-10	39.4	0.0	2.4	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
DUF3880	PF12996.7	gi|84489311|ref|YP_447543.1|	-	3.6e-05	23.8	0.4	0.00015	21.8	0.1	2.3	2	0	0	2	2	2	1	DUF	based	on	E.	rectale	Gene	description	(DUF3880)
Glyco_transf_7C	PF02709.14	gi|84489311|ref|YP_447543.1|	-	0.00012	21.6	0.0	0.00031	20.3	0.0	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	galactosyltransferase
Glyco_tranf_2_4	PF13704.6	gi|84489311|ref|YP_447543.1|	-	0.035	14.6	0.1	0.12	12.9	0.1	1.9	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF3116	PF11313.8	gi|84489311|ref|YP_447543.1|	-	0.043	13.7	0.3	0.043	13.7	0.3	3.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3116)
Glyco_trans_2_3	PF13632.6	gi|84489311|ref|YP_447543.1|	-	0.059	13.3	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.6	gi|84489311|ref|YP_447543.1|	-	0.15	11.6	0.0	0.78	9.2	0.0	2.1	1	1	0	1	1	1	0	Glycosyl	transferase	family	21
YppF	PF14178.6	gi|84489311|ref|YP_447543.1|	-	0.34	10.8	3.3	1.4	8.9	0.3	2.8	2	0	0	2	2	2	0	YppF-like	protein
zf-ribbon_3	PF13248.6	gi|84489312|ref|YP_447544.1|	-	5.1e-05	22.5	3.0	7.3e-05	22.0	3.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84489312|ref|YP_447544.1|	-	0.00015	21.7	2.5	0.0002	21.3	2.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|84489312|ref|YP_447544.1|	-	0.00033	20.2	6.4	0.00069	19.3	6.4	1.6	1	1	0	1	1	1	1	zinc-ribbon	domain
DUF5362	PF17319.2	gi|84489312|ref|YP_447544.1|	-	0.0033	17.2	1.3	0.0047	16.7	1.3	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5362)
TMEM154	PF15102.6	gi|84489312|ref|YP_447544.1|	-	0.0091	15.9	0.2	0.012	15.5	0.2	1.2	1	0	0	1	1	1	1	TMEM154	protein	family
CD20	PF04103.15	gi|84489312|ref|YP_447544.1|	-	0.039	14.0	1.1	0.06	13.4	1.1	1.5	1	1	0	1	1	1	0	CD20-like	family
EVI2A	PF05399.11	gi|84489312|ref|YP_447544.1|	-	0.041	13.5	1.4	0.059	13.0	1.4	1.2	1	0	0	1	1	1	0	Ectropic	viral	integration	site	2A	protein	(EVI2A)
MPS-4	PF17523.2	gi|84489312|ref|YP_447544.1|	-	0.062	13.4	3.5	0.051	13.7	2.1	1.6	1	1	1	2	2	2	0	MinK-related	peptide,	potassium	channel	accessory	sub-unit	protein	4
zinc-ribbons_6	PF07191.12	gi|84489312|ref|YP_447544.1|	-	0.14	12.2	2.7	0.2	11.6	2.6	1.4	1	1	0	1	1	1	0	zinc-ribbons
Spt4	PF06093.13	gi|84489312|ref|YP_447544.1|	-	0.14	12.3	5.4	0.21	11.7	5.4	1.3	1	0	0	1	1	1	0	Spt4/RpoE2	zinc	finger
SelP_N	PF04592.14	gi|84489312|ref|YP_447544.1|	-	0.16	11.4	6.1	0.18	11.2	6.1	1.1	1	0	0	1	1	1	0	Selenoprotein	P,	N	terminal	region
RecR	PF02132.15	gi|84489312|ref|YP_447544.1|	-	0.34	10.5	3.4	0.57	9.8	3.4	1.4	1	0	0	1	1	1	0	RecR	protein
TF_Zn_Ribbon	PF08271.12	gi|84489312|ref|YP_447544.1|	-	0.89	9.1	10.0	0.53	9.8	5.6	2.4	2	1	0	2	2	2	0	TFIIB	zinc-binding
DUF2207	PF09972.9	gi|84489313|ref|YP_447545.1|	-	0.012	14.4	0.7	0.017	13.9	0.7	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Peroxin-13_N	PF04088.13	gi|84489313|ref|YP_447545.1|	-	0.046	14.0	0.2	0.066	13.5	0.2	1.4	1	1	0	1	1	1	0	Peroxin	13,	N-terminal	region
FKBP_N	PF01346.18	gi|84489313|ref|YP_447545.1|	-	0.074	14.0	4.4	0.1	13.6	4.4	1.1	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
MCPVI	PF02993.14	gi|84489313|ref|YP_447545.1|	-	0.15	11.9	0.8	0.18	11.6	0.8	1.1	1	0	0	1	1	1	0	Minor	capsid	protein	VI
DUF4355	PF14265.6	gi|84489313|ref|YP_447545.1|	-	0.2	11.9	15.0	0.32	11.3	15.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
YabA	PF06156.13	gi|84489313|ref|YP_447545.1|	-	0.59	10.8	9.6	0.77	10.4	9.6	1.3	1	1	0	1	1	1	0	Initiation	control	protein	YabA
LMBR1	PF04791.16	gi|84489313|ref|YP_447545.1|	-	6.5	5.5	6.4	7.7	5.3	6.4	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
P63C	PF10546.9	gi|84489314|ref|YP_447546.1|	-	0.018	15.6	0.5	0.043	14.4	0.2	1.6	1	1	1	2	2	2	0	P63C	domain
GxGYxYP_C	PF14323.6	gi|84489314|ref|YP_447546.1|	-	0.072	13.0	3.8	0.11	12.4	3.6	1.4	1	1	0	1	1	1	0	GxGYxYP	putative	glycoside	hydrolase	C-terminal	domain
GDPD	PF03009.17	gi|84489314|ref|YP_447546.1|	-	0.078	12.7	1.8	0.094	12.4	1.8	1.1	1	0	0	1	1	1	0	Glycerophosphoryl	diester	phosphodiesterase	family
CENP-H	PF05837.12	gi|84489314|ref|YP_447546.1|	-	0.14	12.6	1.2	0.25	11.8	1.1	1.5	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
MHB	PF16525.5	gi|84489314|ref|YP_447546.1|	-	0.16	12.3	0.3	0.45	10.8	0.0	1.9	2	0	0	2	2	2	0	Haemophore,	haem-binding
DUF3139	PF11337.8	gi|84489314|ref|YP_447546.1|	-	0.35	11.6	9.5	0.1	13.3	4.8	2.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3139)
Vut_1	PF02592.15	gi|84489315|ref|YP_447547.1|	-	1.1e-29	103.8	14.8	1.1e-29	103.8	14.8	1.9	2	0	0	2	2	2	1	Putative	vitamin	uptake	transporter
AIF_C	PF14721.6	gi|84489316|ref|YP_447548.1|	-	9.9e-05	22.7	0.1	0.00015	22.1	0.1	1.2	1	0	0	1	1	1	1	Apoptosis-inducing	factor,	mitochondrion-associated,	C-term
DUF3836	PF12930.7	gi|84489316|ref|YP_447548.1|	-	0.0011	18.8	0.2	0.0016	18.2	0.2	1.3	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF3836)
DUF4969	PF16339.5	gi|84489316|ref|YP_447548.1|	-	0.11	12.8	0.8	0.23	11.9	0.8	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4969)
HOK_GEF	PF01848.16	gi|84489316|ref|YP_447548.1|	-	0.25	10.8	2.8	0.4	10.1	2.8	1.3	1	0	0	1	1	1	0	Hok/gef	family
DUF4692	PF15763.5	gi|84489317|ref|YP_447549.1|	-	0.00016	22.2	0.9	0.00024	21.6	0.9	1.2	1	0	0	1	1	1	1	Regulator	of	human	erythroid	cell	expansion	(RHEX)
Shisa	PF13908.6	gi|84489317|ref|YP_447549.1|	-	0.00099	19.4	3.4	0.0012	19.1	3.4	1.1	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
DUF3139	PF11337.8	gi|84489317|ref|YP_447549.1|	-	0.02	15.5	1.4	0.031	14.9	0.2	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Coilin_N	PF15862.5	gi|84489317|ref|YP_447549.1|	-	0.023	14.5	1.5	0.03	14.1	1.5	1.3	1	0	0	1	1	1	0	Coilin	N-terminus
PTS_EIIC	PF02378.18	gi|84489317|ref|YP_447549.1|	-	0.024	13.7	0.3	0.031	13.3	0.3	1.2	1	0	0	1	1	1	0	Phosphotransferase	system,	EIIC
Sigma_reg_N	PF13800.6	gi|84489317|ref|YP_447549.1|	-	0.027	14.8	4.2	0.046	14.0	4.2	1.4	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
Mucin	PF01456.17	gi|84489317|ref|YP_447549.1|	-	0.028	14.4	14.0	0.036	14.1	14.0	1.1	1	0	0	1	1	1	0	Mucin-like	glycoprotein
DUF2613	PF11021.8	gi|84489317|ref|YP_447549.1|	-	0.029	14.5	0.8	0.029	14.5	0.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2613)
V_ATPase_I	PF01496.19	gi|84489317|ref|YP_447549.1|	-	0.031	12.2	0.8	0.037	11.9	0.8	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Alpha_GJ	PF03229.13	gi|84489317|ref|YP_447549.1|	-	0.045	14.3	1.6	0.064	13.8	1.6	1.2	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
Peptidase_S49_N	PF08496.10	gi|84489317|ref|YP_447549.1|	-	0.051	13.6	0.3	0.051	13.6	0.3	1.3	2	0	0	2	2	1	0	Peptidase	family	S49	N-terminal
Lectin_N	PF03954.14	gi|84489317|ref|YP_447549.1|	-	0.072	12.8	3.9	0.1	12.4	3.9	1.2	1	0	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
O-antigen_lig	PF13425.6	gi|84489317|ref|YP_447549.1|	-	0.075	11.8	3.1	0.088	11.6	3.1	1.2	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
Zip	PF02535.22	gi|84489317|ref|YP_447549.1|	-	0.081	12.1	0.7	0.11	11.7	0.7	1.3	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF4834	PF16118.5	gi|84489317|ref|YP_447549.1|	-	0.09	13.7	9.1	0.23	12.5	9.1	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
SID-1_RNA_chan	PF13965.6	gi|84489317|ref|YP_447549.1|	-	0.1	11.0	1.3	0.12	10.8	1.3	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
DUF4064	PF13273.6	gi|84489317|ref|YP_447549.1|	-	0.96	9.8	5.5	2.6	8.4	5.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF2149	PF09919.9	gi|84489317|ref|YP_447549.1|	-	1.7	8.9	6.6	7	7.0	6.6	1.9	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2149)
Dicty_REP	PF05086.12	gi|84489317|ref|YP_447549.1|	-	3	5.7	13.6	3.3	5.6	13.6	1.0	1	0	0	1	1	1	0	Dictyostelium	(Slime	Mold)	REP	protein
DUF2371	PF10177.9	gi|84489317|ref|YP_447549.1|	-	5.4	7.2	6.3	17	5.6	6.3	1.8	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
tRNA_anti-codon	PF01336.25	gi|84489318|ref|YP_447550.1|	-	5.1e-08	32.8	0.1	1.3e-07	31.5	0.1	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DHH	PF01368.20	gi|84489318|ref|YP_447550.1|	-	6.6e-05	23.1	0.1	0.00014	22.0	0.1	1.5	1	0	0	1	1	1	1	DHH	family
tRNA_anti_2	PF13742.6	gi|84489318|ref|YP_447550.1|	-	0.00072	19.7	0.0	0.0019	18.4	0.0	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
S1	PF00575.23	gi|84489318|ref|YP_447550.1|	-	0.0011	19.3	1.9	0.0086	16.4	1.9	2.5	1	1	0	1	1	1	1	S1	RNA	binding	domain
CheF-arch	PF04283.12	gi|84489318|ref|YP_447550.1|	-	0.0092	15.8	0.1	0.025	14.3	0.1	1.7	1	0	0	1	1	1	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
IDEAL	PF08858.10	gi|84489318|ref|YP_447550.1|	-	0.12	12.1	2.4	0.36	10.6	2.4	1.8	1	0	0	1	1	1	0	IDEAL	domain
RIH_assoc	PF08454.11	gi|84489319|ref|YP_447551.1|	-	0.0028	17.5	1.1	0.0028	17.5	1.1	2.0	1	1	1	2	2	2	1	RyR	and	IP3R	Homology	associated
Rhamno_transf	PF11316.8	gi|84489319|ref|YP_447551.1|	-	0.015	14.7	0.0	0.022	14.1	0.0	1.3	1	0	0	1	1	1	0	Putative	rhamnosyl	transferase
CENP-U	PF13097.6	gi|84489319|ref|YP_447551.1|	-	0.036	14.0	4.3	0.036	14.0	4.3	1.8	2	0	0	2	2	2	0	CENP-A	nucleosome	associated	complex	(NAC)	subunit
DivIC	PF04977.15	gi|84489319|ref|YP_447551.1|	-	0.11	12.3	0.3	0.11	12.3	0.3	2.6	3	1	0	3	3	3	0	Septum	formation	initiator
FliD_N	PF02465.18	gi|84489319|ref|YP_447551.1|	-	0.43	11.3	6.2	6.2	7.6	2.0	2.8	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
Prefoldin	PF02996.17	gi|84489319|ref|YP_447551.1|	-	0.52	10.2	9.8	0.97	9.4	0.5	3.2	4	0	0	4	4	4	0	Prefoldin	subunit
KMP11	PF03037.16	gi|84489319|ref|YP_447551.1|	-	0.84	10.5	9.4	0.24	12.2	5.3	2.2	1	1	1	2	2	2	0	Kinetoplastid	membrane	protein	11
BLI1	PF17324.2	gi|84489319|ref|YP_447551.1|	-	2	9.1	15.5	0.25	12.0	3.8	2.8	1	1	1	3	3	3	0	BLOC-1	interactor	1
Aminotran_1_2	PF00155.21	gi|84489320|ref|YP_447552.1|	-	6.6e-69	232.8	0.3	7.5e-69	232.6	0.3	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|84489320|ref|YP_447552.1|	-	1.9e-07	30.7	1.7	2.8e-07	30.2	0.8	1.6	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|84489320|ref|YP_447552.1|	-	2e-06	26.6	2.0	3.1e-06	26.0	0.6	1.8	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|84489320|ref|YP_447552.1|	-	6.1e-06	25.4	1.0	1.3e-05	24.4	0.3	1.8	1	1	1	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|84489320|ref|YP_447552.1|	-	0.016	14.5	0.1	0.025	13.9	0.1	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
NAD_binding_3	PF03447.16	gi|84489320|ref|YP_447552.1|	-	0.031	14.9	0.0	0.25	12.0	0.0	2.4	2	0	0	2	2	2	0	Homoserine	dehydrogenase,	NAD	binding	domain
Trigger_C	PF05698.14	gi|84489320|ref|YP_447552.1|	-	0.045	13.8	0.0	0.13	12.2	0.0	1.8	1	0	0	1	1	1	0	Bacterial	trigger	factor	protein	(TF)	C-terminus
DUF4359	PF14271.6	gi|84489320|ref|YP_447552.1|	-	0.18	12.6	3.3	0.26	12.1	0.3	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4359)
Radical_SAM	PF04055.21	gi|84489321|ref|YP_447553.1|	-	1.1e-15	58.4	0.1	2.6e-15	57.2	0.1	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|84489321|ref|YP_447553.1|	-	0.043	13.8	0.0	0.079	13.0	0.0	1.4	1	0	0	1	1	1	0	B12	binding	domain
MarR	PF01047.22	gi|84489322|ref|YP_447554.1|	-	4.4e-12	45.7	0.4	2.1e-11	43.6	0.1	2.0	2	0	0	2	2	2	1	MarR	family
HTH_24	PF13412.6	gi|84489322|ref|YP_447554.1|	-	5e-06	26.0	0.0	9.3e-06	25.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|84489322|ref|YP_447554.1|	-	1.5e-05	25.0	0.5	3.2e-05	24.0	0.1	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|84489322|ref|YP_447554.1|	-	2.3e-05	24.1	0.3	6.8e-05	22.6	0.1	1.7	1	1	1	2	2	2	1	HxlR-like	helix-turn-helix
MarR_2	PF12802.7	gi|84489322|ref|YP_447554.1|	-	2.6e-05	24.0	0.0	3.4e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|84489322|ref|YP_447554.1|	-	0.00013	22.4	0.0	0.00037	20.9	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|84489322|ref|YP_447554.1|	-	0.00082	19.2	0.0	0.0014	18.5	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.6	gi|84489322|ref|YP_447554.1|	-	0.0009	19.2	0.0	0.0017	18.3	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|84489322|ref|YP_447554.1|	-	0.0018	18.1	0.0	0.0032	17.3	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.14	gi|84489322|ref|YP_447554.1|	-	0.0032	17.4	0.1	0.0087	16.0	0.1	1.7	1	1	1	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_11	PF08279.12	gi|84489322|ref|YP_447554.1|	-	0.0072	16.3	0.1	0.018	15.0	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.6	gi|84489322|ref|YP_447554.1|	-	0.0084	16.1	0.3	0.0084	16.1	0.3	1.6	2	0	0	2	2	1	1	Winged	helix-turn-helix
HTH_23	PF13384.6	gi|84489322|ref|YP_447554.1|	-	0.013	15.3	0.0	0.032	14.0	0.0	1.7	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_AsnC-type	PF13404.6	gi|84489322|ref|YP_447554.1|	-	0.015	15.1	0.0	0.023	14.5	0.0	1.3	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
GntR	PF00392.21	gi|84489322|ref|YP_447554.1|	-	0.03	14.0	0.0	0.05	13.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_DeoR	PF08220.12	gi|84489322|ref|YP_447554.1|	-	0.033	14.0	0.9	0.099	12.4	0.1	2.1	3	0	0	3	3	2	0	DeoR-like	helix-turn-helix	domain
DUF3116	PF11313.8	gi|84489322|ref|YP_447554.1|	-	0.038	13.8	1.9	0.12	12.2	0.2	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3116)
Penicillinase_R	PF03965.16	gi|84489322|ref|YP_447554.1|	-	0.041	14.2	0.2	0.091	13.1	0.2	1.7	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_3	PF01381.22	gi|84489322|ref|YP_447554.1|	-	0.065	13.3	0.0	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_38	PF13936.6	gi|84489322|ref|YP_447554.1|	-	0.068	12.9	0.2	0.22	11.3	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_28	PF13518.6	gi|84489322|ref|YP_447554.1|	-	0.076	13.1	0.0	0.14	12.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|84489322|ref|YP_447554.1|	-	0.076	12.5	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
RP-C	PF03428.13	gi|84489322|ref|YP_447554.1|	-	0.13	11.9	0.0	0.18	11.4	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
MerR	PF00376.23	gi|84489322|ref|YP_447554.1|	-	0.13	12.0	0.1	0.29	10.9	0.1	1.6	1	1	0	1	1	1	0	MerR	family	regulatory	protein
MatE	PF01554.18	gi|84489323|ref|YP_447555.1|	-	1.3e-52	177.7	52.1	4.6e-31	107.7	10.9	3.3	4	0	0	4	4	4	2	MatE
Polysacc_synt_C	PF14667.6	gi|84489323|ref|YP_447555.1|	-	1.5e-09	38.0	42.6	4.7e-07	30.0	22.5	5.4	4	2	1	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
CTP_transf_like	PF01467.26	gi|84489324|ref|YP_447556.1|	-	1e-15	58.1	0.0	1.2e-15	58.0	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|84489324|ref|YP_447556.1|	-	0.0023	17.8	0.0	0.003	17.5	0.0	1.3	1	0	0	1	1	1	1	FAD	synthetase
Pantoate_ligase	PF02569.15	gi|84489324|ref|YP_447556.1|	-	0.096	11.9	0.0	0.17	11.1	0.0	1.4	1	0	0	1	1	1	0	Pantoate-beta-alanine	ligase
Glyco_trans_1_3	PF13528.6	gi|84489325|ref|YP_447557.1|	-	3.1e-12	46.4	0.0	3e-09	36.6	0.0	2.1	2	0	0	2	2	2	2	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.16	gi|84489325|ref|YP_447557.1|	-	5.6e-11	42.7	0.1	9.6e-11	41.9	0.1	1.4	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_4_2	PF13477.6	gi|84489325|ref|YP_447557.1|	-	0.00014	21.9	0.1	0.00041	20.4	0.1	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.6	gi|84489325|ref|YP_447557.1|	-	0.015	15.3	0.0	0.045	13.7	0.0	1.7	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
Glyco_transf_28	PF03033.20	gi|84489325|ref|YP_447557.1|	-	0.049	13.7	0.0	0.15	12.1	0.0	1.9	2	0	0	2	2	2	0	Glycosyltransferase	family	28	N-terminal	domain
Imm3	PF14425.6	gi|84489325|ref|YP_447557.1|	-	0.069	13.2	2.1	0.18	11.9	2.1	1.7	1	0	0	1	1	1	0	Immunity	protein	Imm3
Lactamase_B_3	PF13483.6	gi|84489326|ref|YP_447558.1|	-	3.6e-26	92.0	0.1	4.5e-26	91.7	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|84489326|ref|YP_447558.1|	-	2.2e-23	82.8	0.1	3e-23	82.4	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|84489326|ref|YP_447558.1|	-	1.4e-10	41.5	0.3	1.9e-10	41.1	0.3	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
FbpA	PF05833.11	gi|84489327|ref|YP_447559.1|	-	8.9e-110	367.5	24.6	1.1e-109	367.2	24.6	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|84489327|ref|YP_447559.1|	-	3.7e-29	101.6	0.3	1.3e-28	99.8	0.0	2.1	2	0	0	2	2	2	1	NFACT	protein	RNA	binding	domain
H2TH	PF06831.14	gi|84489327|ref|YP_447559.1|	-	0.0016	18.4	1.8	0.003	17.5	0.0	2.3	3	0	0	3	3	3	1	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
Ribosomal_S13	PF00416.22	gi|84489327|ref|YP_447559.1|	-	0.0022	18.4	0.1	0.0022	18.4	0.1	3.2	3	0	0	3	3	3	1	Ribosomal	protein	S13/S18
NFACT-R_2	PF18297.1	gi|84489327|ref|YP_447559.1|	-	0.0028	17.8	0.4	0.015	15.5	0.0	2.4	3	0	0	3	3	3	1	NFACT	protein	RNA	binding	domain
CBFD_NFYB_HMF	PF00808.23	gi|84489328|ref|YP_447560.1|	-	4.4e-18	65.3	0.7	4.8e-18	65.2	0.7	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|84489328|ref|YP_447560.1|	-	2.2e-12	47.5	0.1	2.4e-12	47.3	0.1	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-T_C	PF15511.6	gi|84489328|ref|YP_447560.1|	-	1.9e-06	27.9	0.0	2.1e-06	27.8	0.0	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
CENP-S	PF15630.6	gi|84489328|ref|YP_447560.1|	-	8.5e-06	26.1	0.1	9.6e-06	25.9	0.1	1.1	1	0	0	1	1	1	1	CENP-S	protein
TAF	PF02969.17	gi|84489328|ref|YP_447560.1|	-	2.8e-05	24.2	0.5	3e-05	24.1	0.5	1.0	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
TFIID-31kDa	PF02291.15	gi|84489328|ref|YP_447560.1|	-	0.0049	16.9	0.1	0.0054	16.8	0.1	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
Cation_efflux	PF01545.21	gi|84489329|ref|YP_447561.1|	-	1.7e-36	125.8	24.5	2.1e-36	125.6	24.5	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|84489329|ref|YP_447561.1|	-	2.9e-21	75.4	2.2	5e-21	74.6	2.2	1.4	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
TGT	PF01702.18	gi|84489330|ref|YP_447562.1|	-	7e-82	275.4	0.1	1.5e-81	274.3	0.1	1.4	2	0	0	2	2	2	1	Queuine	tRNA-ribosyltransferase
TGT_C2	PF14810.6	gi|84489330|ref|YP_447562.1|	-	5.2e-26	90.6	0.0	1.1e-24	86.3	0.0	2.6	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|84489330|ref|YP_447562.1|	-	1.2e-16	60.4	0.0	2.1e-15	56.4	0.0	2.5	2	0	0	2	2	2	1	PUA	domain
DUF5591	PF17884.1	gi|84489330|ref|YP_447562.1|	-	4.4e-08	33.1	0.6	1e-07	32.0	0.6	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
UPF0113	PF03657.13	gi|84489330|ref|YP_447562.1|	-	1.7e-05	25.0	0.7	7.5e-05	22.9	0.0	2.5	3	0	0	3	3	3	1	UPF0113	PUA	domain
DNA_ligase_A_M	PF01068.21	gi|84489330|ref|YP_447562.1|	-	0.028	14.1	0.2	0.062	12.9	0.2	1.6	1	0	0	1	1	1	0	ATP	dependent	DNA	ligase	domain
Vault_4	PF17796.1	gi|84489330|ref|YP_447562.1|	-	0.03	14.4	0.0	0.12	12.4	0.0	2.0	2	0	0	2	2	2	0	Major	Vault	Protein	repeat	domain
DUF832	PF05734.11	gi|84489330|ref|YP_447562.1|	-	0.036	13.6	0.2	0.064	12.7	0.2	1.4	1	0	0	1	1	1	0	Herpesvirus	protein	of	unknown	function	(DUF832)
PyrI	PF01948.18	gi|84489331|ref|YP_447563.1|	-	7.9e-32	109.4	3.2	1.1e-31	108.9	3.2	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|84489331|ref|YP_447563.1|	-	1.8e-18	66.1	4.7	3e-18	65.5	4.7	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Saf_2TM	PF18303.1	gi|84489331|ref|YP_447563.1|	-	0.087	12.4	0.1	0.12	11.9	0.1	1.2	1	0	0	1	1	1	0	SAVED-fused	2TM	effector	domain
DNA_pol3_theta	PF06440.11	gi|84489331|ref|YP_447563.1|	-	0.14	11.9	0.3	0.39	10.4	0.1	1.9	2	0	0	2	2	2	0	DNA	polymerase	III,	theta	subunit
UPF0047	PF01894.17	gi|84489332|ref|YP_447564.1|	-	1.7e-34	118.4	0.3	2.5e-34	117.9	0.3	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
DUF4325	PF14213.6	gi|84489333|ref|YP_447565.1|	-	0.0012	18.5	2.4	0.0043	16.7	2.4	1.9	1	1	0	1	1	1	1	STAS-like	domain	of	unknown	function	(DUF4325)
Rad21_Rec8_N	PF04825.13	gi|84489333|ref|YP_447565.1|	-	0.03	14.5	0.1	0.051	13.7	0.1	1.4	1	0	0	1	1	1	0	N	terminus	of	Rad21	/	Rec8	like	protein
Aldo_ket_red	PF00248.21	gi|84489334|ref|YP_447566.1|	-	2.5e-33	115.6	0.1	3.3e-32	111.9	0.1	2.0	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|84489334|ref|YP_447566.1|	-	1e-07	32.4	13.3	2e-07	31.4	13.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489334|ref|YP_447566.1|	-	8.7e-07	29.0	12.5	2.9e-06	27.3	12.6	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489334|ref|YP_447566.1|	-	1.4e-05	25.2	9.5	0.0023	18.1	1.7	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489334|ref|YP_447566.1|	-	6.2e-05	23.0	6.0	0.014	15.6	0.9	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489334|ref|YP_447566.1|	-	0.00064	20.1	11.4	0.0015	18.9	11.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489334|ref|YP_447566.1|	-	0.0019	18.2	10.2	0.013	15.5	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|84489334|ref|YP_447566.1|	-	0.0076	16.0	3.4	0.0076	16.0	3.4	2.4	1	1	1	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_10	PF13237.6	gi|84489334|ref|YP_447566.1|	-	0.012	15.7	15.5	0.034	14.2	3.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489334|ref|YP_447566.1|	-	0.024	15.5	5.2	0.17	12.8	0.9	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489334|ref|YP_447566.1|	-	0.11	12.4	13.4	0.049	13.5	2.8	2.6	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489334|ref|YP_447566.1|	-	0.11	13.0	15.4	0.85	10.3	15.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489334|ref|YP_447566.1|	-	1.2	10.1	16.6	0.25	12.3	4.6	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|84489334|ref|YP_447566.1|	-	7.5	6.8	14.7	0.25	11.5	2.5	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489334|ref|YP_447566.1|	-	9.6	7.0	16.8	0.067	13.7	4.5	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
tRNA_synthFbeta	PF17759.1	gi|84489335|ref|YP_447567.1|	-	1.4e-39	135.8	0.5	4.3e-39	134.2	0.5	1.8	2	0	0	2	2	2	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|84489335|ref|YP_447567.1|	-	2e-18	66.4	1.5	2.1e-15	56.7	0.3	3.6	4	0	0	4	4	4	1	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|84489335|ref|YP_447567.1|	-	5.2e-16	58.8	0.2	2.1e-15	56.8	0.1	2.0	2	0	0	2	2	2	1	B3/4	domain
PhetRS_B1	PF18262.1	gi|84489335|ref|YP_447567.1|	-	1.7e-05	24.9	0.2	0.11	12.7	0.0	3.8	2	1	0	2	2	2	1	Phe-tRNA	synthetase	beta	subunit	B1	domain
tRNA-synt_2d	PF01409.20	gi|84489335|ref|YP_447567.1|	-	0.002	17.6	0.6	0.0046	16.5	0.6	1.6	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
CFAP91	PF14738.6	gi|84489335|ref|YP_447567.1|	-	0.054	13.5	0.0	0.13	12.3	0.0	1.6	1	0	0	1	1	1	0	Cilia-	and	flagella-associated	protein	91
DUF2456	PF10445.9	gi|84489336|ref|YP_447568.1|	-	0.013	15.6	2.2	0.013	15.6	2.2	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2456)
HTH_3	PF01381.22	gi|84489337|ref|YP_447569.1|	-	6.2e-05	23.0	0.0	0.00012	22.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_24	PF13412.6	gi|84489337|ref|YP_447569.1|	-	0.011	15.2	0.0	0.053	13.1	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_23	PF13384.6	gi|84489337|ref|YP_447569.1|	-	0.013	15.2	0.0	0.022	14.6	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_5	PF01022.20	gi|84489337|ref|YP_447569.1|	-	0.013	15.3	0.0	0.029	14.2	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DUF4473	PF14747.6	gi|84489337|ref|YP_447569.1|	-	0.023	15.2	0.0	0.037	14.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
HTH_37	PF13744.6	gi|84489337|ref|YP_447569.1|	-	0.032	14.2	0.0	0.058	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|84489337|ref|YP_447569.1|	-	0.036	13.7	0.0	0.064	13.0	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
LMWPc	PF01451.21	gi|84489337|ref|YP_447569.1|	-	0.074	13.4	0.0	0.098	13.0	0.0	1.2	1	0	0	1	1	1	0	Low	molecular	weight	phosphotyrosine	protein	phosphatase
HTH_19	PF12844.7	gi|84489337|ref|YP_447569.1|	-	0.081	13.0	0.0	0.22	11.5	0.0	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain
DUF3939	PF13075.6	gi|84489337|ref|YP_447569.1|	-	0.096	12.7	0.0	0.17	11.9	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3939)
YdaS_antitoxin	PF15943.5	gi|84489337|ref|YP_447569.1|	-	0.1	12.5	0.0	0.26	11.2	0.0	1.8	1	1	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_Crp_2	PF13545.6	gi|84489337|ref|YP_447569.1|	-	0.2	11.7	0.0	0.3	11.1	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Glu_cys_ligase	PF04262.14	gi|84489338|ref|YP_447570.1|	-	3.5e-98	328.6	5.6	8.2e-77	258.3	0.9	2.1	1	1	1	2	2	2	2	Glutamate-cysteine	ligase
Flavin_Reduct	PF01613.18	gi|84489339|ref|YP_447571.1|	-	2.3e-24	86.2	0.0	2.8e-24	85.9	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Flavin_Reduct	PF01613.18	gi|84489340|ref|YP_447572.1|	-	6.1e-23	81.6	0.0	7.6e-23	81.3	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
NTP_transferase	PF00483.23	gi|84489341|ref|YP_447573.1|	-	1.2e-17	64.4	0.0	1.6e-17	63.9	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|84489341|ref|YP_447573.1|	-	5.1e-06	26.9	0.0	6.6e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|84489341|ref|YP_447573.1|	-	0.2	11.3	0.0	0.28	10.9	0.0	1.4	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
GDP_Man_Dehyd	PF16363.5	gi|84489342|ref|YP_447574.1|	-	6.6e-40	137.5	0.0	8.8e-40	137.1	0.0	1.2	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|84489342|ref|YP_447574.1|	-	4.8e-31	108.1	0.0	6.1e-31	107.7	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.15	gi|84489342|ref|YP_447574.1|	-	4.9e-16	58.7	0.2	4.7e-15	55.5	0.2	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|84489342|ref|YP_447574.1|	-	2.9e-12	46.2	0.1	5e-12	45.4	0.1	1.4	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|84489342|ref|YP_447574.1|	-	3.1e-10	39.6	0.0	5.4e-10	38.8	0.0	1.3	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|84489342|ref|YP_447574.1|	-	2.6e-06	26.8	1.7	1.5e-05	24.3	0.1	2.3	2	1	0	2	2	2	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|84489342|ref|YP_447574.1|	-	0.0054	16.7	0.0	0.0088	16.0	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
DegT_DnrJ_EryC1	PF01041.17	gi|84489343|ref|YP_447575.1|	-	2.7e-91	306.6	0.0	3.5e-91	306.2	0.0	1.1	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|84489343|ref|YP_447575.1|	-	5.1e-05	22.4	0.0	0.0013	17.8	0.0	2.1	2	0	0	2	2	2	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|84489343|ref|YP_447575.1|	-	6.1e-05	22.3	0.0	0.00019	20.7	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|84489343|ref|YP_447575.1|	-	0.00062	18.4	0.0	0.0011	17.6	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|84489343|ref|YP_447575.1|	-	0.0018	17.6	0.0	0.0032	16.8	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
DAHP_snth_FXD	PF18152.1	gi|84489343|ref|YP_447575.1|	-	0.034	14.0	0.2	37	4.3	0.1	3.9	4	0	0	4	4	4	0	DAHP	synthase	ferredoxin-like	domain
HetR_C	PF18460.1	gi|84489343|ref|YP_447575.1|	-	0.066	13.1	0.3	0.21	11.5	0.0	1.9	2	0	0	2	2	2	0	Heterocyst	differentiation	regulator	C-terminal	Hood	domain
HpcH_HpaI	PF03328.14	gi|84489344|ref|YP_447576.1|	-	1e-06	28.0	0.0	1.3e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
PfkB	PF00294.24	gi|84489345|ref|YP_447577.1|	-	3.1e-33	115.4	0.0	2.5e-32	112.4	0.0	1.9	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|84489345|ref|YP_447577.1|	-	0.00024	20.6	0.0	0.00034	20.1	0.0	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Exo_endo_phos_2	PF14529.6	gi|84489345|ref|YP_447577.1|	-	0.096	12.5	0.1	0.58	10.0	0.0	2.1	2	0	0	2	2	2	0	Endonuclease-reverse	transcriptase
TPP_enzyme_N	PF02776.18	gi|84489346|ref|YP_447578.1|	-	7.9e-47	159.0	0.0	1.2e-46	158.5	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|84489346|ref|YP_447578.1|	-	5.9e-31	107.0	0.0	1.1e-30	106.1	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.21	gi|84489346|ref|YP_447578.1|	-	2e-29	102.4	0.0	2e-28	99.1	0.0	2.3	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Epimerase	PF01370.21	gi|84489347|ref|YP_447579.1|	-	3.7e-28	98.6	0.0	4.5e-28	98.3	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|84489347|ref|YP_447579.1|	-	1.3e-10	41.3	0.0	9.3e-10	38.4	0.0	2.2	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|84489347|ref|YP_447579.1|	-	1.9e-06	27.1	0.1	5.3e-06	25.6	0.1	1.7	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.6	gi|84489347|ref|YP_447579.1|	-	0.0044	16.9	0.0	0.0069	16.3	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
NAD_binding_4	PF07993.12	gi|84489347|ref|YP_447579.1|	-	0.0055	15.9	0.0	0.065	12.4	0.0	2.2	2	1	0	2	2	2	1	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|84489347|ref|YP_447579.1|	-	0.098	11.7	0.0	1	8.4	0.0	2.0	2	0	0	2	2	2	0	RmlD	substrate	binding	domain
KR	PF08659.10	gi|84489347|ref|YP_447579.1|	-	0.17	11.8	0.1	0.64	9.9	0.1	1.9	1	1	0	1	1	1	0	KR	domain
Glycos_transf_2	PF00535.26	gi|84489348|ref|YP_447580.1|	-	2.3e-20	73.1	0.9	4.7e-20	72.1	0.9	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489348|ref|YP_447580.1|	-	3.1e-05	24.0	0.0	4.3e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489348|ref|YP_447580.1|	-	0.027	15.0	0.0	0.058	13.9	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Wzz	PF02706.15	gi|84489348|ref|YP_447580.1|	-	0.69	10.2	3.0	21	5.5	0.1	2.6	2	0	0	2	2	2	0	Chain	length	determinant	protein
dTDP_sugar_isom	PF00908.17	gi|84489349|ref|YP_447581.1|	-	5.5e-78	260.5	0.1	6.2e-78	260.3	0.1	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FMN_red	PF03358.15	gi|84489350|ref|YP_447582.1|	-	1e-34	119.5	0.0	1.3e-34	119.2	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489350|ref|YP_447582.1|	-	7.6e-10	38.8	0.0	9.1e-10	38.6	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Glycos_transf_2	PF00535.26	gi|84489351|ref|YP_447583.1|	-	5.8e-32	110.8	0.0	7.6e-32	110.5	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489351|ref|YP_447583.1|	-	0.0012	18.8	0.0	0.0014	18.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489351|ref|YP_447583.1|	-	0.0061	17.0	0.0	0.011	16.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
AhpC-TSA	PF00578.21	gi|84489351|ref|YP_447583.1|	-	0.079	12.9	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	AhpC/TSA	family
DUF2304	PF10066.9	gi|84489352|ref|YP_447584.1|	-	2.1e-29	101.9	8.4	2.3e-29	101.7	8.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2304)
TraG_N	PF07916.11	gi|84489352|ref|YP_447584.1|	-	1.1	8.0	5.6	0.65	8.8	2.9	1.7	1	1	1	2	2	2	0	TraG-like	protein,	N-terminal	region
TPPK_C	PF12555.8	gi|84489352|ref|YP_447584.1|	-	4.8	7.3	9.7	11	6.2	3.6	2.7	1	1	1	2	2	2	0	Thiamine	pyrophosphokinase	C	terminal
ATP-synt_I	PF03899.15	gi|84489352|ref|YP_447584.1|	-	9.5	6.7	13.4	19	5.7	13.4	1.7	1	1	0	1	1	1	0	ATP	synthase	I	chain
NAC	PF01849.18	gi|84489353|ref|YP_447585.1|	-	4.5e-17	61.8	5.5	7.5e-17	61.1	5.5	1.3	1	0	0	1	1	1	1	NAC	domain
DUF603	PF04645.12	gi|84489353|ref|YP_447585.1|	-	0.011	15.4	1.0	0.015	15.1	0.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF603
UPF0154	PF03672.13	gi|84489353|ref|YP_447585.1|	-	0.022	14.8	5.9	21	5.2	2.4	3.2	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
SPT6_acidic	PF14632.6	gi|84489353|ref|YP_447585.1|	-	0.044	14.4	1.8	0.053	14.1	1.4	1.4	1	1	0	1	1	1	0	Acidic	N-terminal	SPT6
Big_11	PF18200.1	gi|84489353|ref|YP_447585.1|	-	0.093	12.7	0.5	0.39	10.7	0.1	1.9	2	0	0	2	2	2	0	Bacterial	Ig-like	domain
UBA_4	PF14555.6	gi|84489353|ref|YP_447585.1|	-	0.096	12.5	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	UBA-like	domain
YpjP	PF14005.6	gi|84489353|ref|YP_447585.1|	-	1.4	8.9	4.9	0.51	10.4	1.3	1.8	1	1	1	2	2	2	0	YpjP-like	protein
Metallophos	PF00149.28	gi|84489354|ref|YP_447586.1|	-	5e-16	59.8	0.4	7.2e-16	59.3	0.4	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84489354|ref|YP_447586.1|	-	9.6e-14	51.9	0.0	2.3e-13	50.7	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|84489354|ref|YP_447586.1|	-	0.029	13.7	0.1	0.93	8.8	0.1	2.7	2	1	1	3	3	3	0	Metallophosphoesterase,	calcineurin	superfamily
RNase_Zc3h12a	PF11977.8	gi|84489355|ref|YP_447587.1|	-	1.1e-20	73.9	0.0	2e-20	73.2	0.0	1.4	1	0	0	1	1	1	1	Zc3h12a-like	Ribonuclease	NYN	domain
PRORP	PF16953.5	gi|84489355|ref|YP_447587.1|	-	6.9e-05	22.5	0.0	0.00011	21.8	0.0	1.3	1	0	0	1	1	1	1	Protein-only	RNase	P
CttA_N	PF18244.1	gi|84489356|ref|YP_447588.1|	-	0.91	10.0	2.9	1.3	9.5	0.1	2.6	4	0	0	4	4	4	0	Cellulose-binding	protein	CttA	N-terminal	domain
Macoilin	PF09726.9	gi|84489357|ref|YP_447589.1|	-	4.2	5.8	15.1	4.7	5.6	15.1	1.0	1	0	0	1	1	1	0	Macoilin	family
MGC-24	PF05283.11	gi|84489357|ref|YP_447589.1|	-	4.6	7.7	9.6	8.3	6.9	9.6	1.5	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24),	sialomucin
Mitofilin	PF09731.9	gi|84489358|ref|YP_447590.1|	-	2.1e-05	23.6	1.7	2.3e-05	23.4	1.7	1.0	1	0	0	1	1	1	1	Mitochondrial	inner	membrane	protein
Shisa	PF13908.6	gi|84489358|ref|YP_447590.1|	-	0.0033	17.7	9.4	0.0055	17.0	9.4	1.5	1	1	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
DUF4330	PF14221.6	gi|84489358|ref|YP_447590.1|	-	0.0035	17.6	2.0	0.0044	17.3	2.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4330)
SpoIIIAH	PF12685.7	gi|84489358|ref|YP_447590.1|	-	0.0039	17.1	10.9	0.0059	16.5	10.9	1.3	1	0	0	1	1	1	1	SpoIIIAH-like	protein
MctB	PF11382.8	gi|84489358|ref|YP_447590.1|	-	0.0049	16.6	0.2	0.0064	16.2	0.2	1.3	1	0	0	1	1	1	1	Copper	transport	outer	membrane	protein,	MctB
IgaA	PF07095.11	gi|84489358|ref|YP_447590.1|	-	0.01	13.9	0.2	0.011	13.8	0.2	1.0	1	0	0	1	1	1	0	Intracellular	growth	attenuator	protein	IgaA
Peptidase_S49_N	PF08496.10	gi|84489358|ref|YP_447590.1|	-	0.013	15.5	0.1	0.017	15.2	0.1	1.1	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
ABC2_membrane_3	PF12698.7	gi|84489358|ref|YP_447590.1|	-	0.016	14.3	2.3	0.022	13.9	2.3	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Raftlin	PF15250.6	gi|84489358|ref|YP_447590.1|	-	0.019	13.7	6.5	0.019	13.7	6.5	1.0	1	0	0	1	1	1	0	Raftlin
O-antigen_lig	PF13425.6	gi|84489358|ref|YP_447590.1|	-	0.04	12.7	2.4	0.047	12.5	2.4	1.0	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
DUF3810	PF12725.7	gi|84489358|ref|YP_447590.1|	-	0.057	12.8	0.0	0.064	12.6	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
Neur_chan_memb	PF02932.16	gi|84489358|ref|YP_447590.1|	-	0.065	13.3	3.8	0.081	13.0	3.8	1.1	1	0	0	1	1	1	0	Neurotransmitter-gated	ion-channel	transmembrane	region
PTS_EIIC	PF02378.18	gi|84489358|ref|YP_447590.1|	-	0.12	11.4	0.4	0.15	11.1	0.4	1.1	1	0	0	1	1	1	0	Phosphotransferase	system,	EIIC
LapA_dom	PF06305.11	gi|84489358|ref|YP_447590.1|	-	0.12	12.2	0.4	0.27	11.1	0.4	1.5	1	0	0	1	1	1	0	Lipopolysaccharide	assembly	protein	A	domain
AI-2E_transport	PF01594.16	gi|84489358|ref|YP_447590.1|	-	0.13	11.4	0.4	0.15	11.2	0.4	1.0	1	0	0	1	1	1	0	AI-2E	family	transporter
FAM70	PF14967.6	gi|84489358|ref|YP_447590.1|	-	0.15	11.5	5.1	0.18	11.3	5.1	1.0	1	0	0	1	1	1	0	FAM70	protein
DUF4834	PF16118.5	gi|84489358|ref|YP_447590.1|	-	0.38	11.7	16.0	1.6e+02	3.3	16.0	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
Ureide_permease	PF07168.11	gi|84489358|ref|YP_447590.1|	-	0.71	8.6	4.8	0.98	8.1	4.8	1.4	1	1	0	1	1	1	0	Ureide	permease
B277	PF17623.2	gi|84489358|ref|YP_447590.1|	-	0.73	8.9	6.0	1	8.4	6.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function
Chordopox_A13L	PF05961.11	gi|84489358|ref|YP_447590.1|	-	1.6	9.0	11.0	35	4.7	11.0	2.7	1	1	0	1	1	1	0	Chordopoxvirus	A13L	protein
Pilin_N	PF07790.11	gi|84489358|ref|YP_447590.1|	-	2.2	9.3	11.1	0.42	11.6	4.8	2.1	1	1	1	2	2	2	0	Archaeal	Type	IV	pilin,	N-terminal
ArgJ	PF01960.18	gi|84489359|ref|YP_447591.1|	-	3.8e-132	440.6	9.1	4.4e-132	440.3	9.1	1.0	1	0	0	1	1	1	1	ArgJ	family
AA_kinase	PF00696.28	gi|84489360|ref|YP_447592.1|	-	2.7e-51	174.5	2.1	3.2e-51	174.3	2.1	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
RNase_HII	PF01351.18	gi|84489361|ref|YP_447593.1|	-	6.9e-27	94.6	0.5	1.2e-26	93.8	0.5	1.4	1	0	0	1	1	1	1	Ribonuclease	HII
DUF1667	PF07892.11	gi|84489361|ref|YP_447593.1|	-	0.0043	17.1	1.6	3	8.0	0.3	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1667)
DUF561	PF04481.12	gi|84489361|ref|YP_447593.1|	-	0.01	15.0	3.8	0.029	13.5	0.2	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
DUF3378	PF11858.8	gi|84489361|ref|YP_447593.1|	-	0.039	14.1	0.1	0.039	14.1	0.1	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3378)
Myb_DNA-bind_7	PF15963.5	gi|84489361|ref|YP_447593.1|	-	1.4	8.9	5.5	2.5	8.1	1.1	2.5	2	0	0	2	2	2	0	Myb	DNA-binding	like
Semialdhyde_dh	PF01118.24	gi|84489362|ref|YP_447594.1|	-	3.3e-36	124.4	0.0	5e-36	123.8	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.18	gi|84489362|ref|YP_447594.1|	-	1.4e-27	96.9	0.0	2.3e-27	96.2	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
DapB_N	PF01113.20	gi|84489362|ref|YP_447594.1|	-	0.0016	18.6	0.0	0.003	17.7	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
NAD_binding_10	PF13460.6	gi|84489362|ref|YP_447594.1|	-	0.077	12.9	0.0	0.3	11.0	0.0	1.9	2	0	0	2	2	2	0	NAD(P)H-binding
Epimerase	PF01370.21	gi|84489362|ref|YP_447594.1|	-	0.081	12.4	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Flavodoxin_5	PF12724.7	gi|84489363|ref|YP_447595.1|	-	8.2e-11	42.3	0.1	1.1e-05	25.7	0.0	2.1	2	0	0	2	2	2	2	Flavodoxin	domain
Flavodoxin_3	PF12641.7	gi|84489363|ref|YP_447595.1|	-	1.8e-06	27.7	0.6	0.0012	18.6	0.1	2.1	2	0	0	2	2	2	2	Flavodoxin	domain
Flavodoxin_4	PF12682.7	gi|84489363|ref|YP_447595.1|	-	1.5e-05	24.7	0.4	8.3e-05	22.3	0.4	1.9	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_1	PF00258.25	gi|84489363|ref|YP_447595.1|	-	0.00051	20.3	0.0	0.15	12.3	0.0	2.2	2	0	0	2	2	2	2	Flavodoxin
YejG	PF13989.6	gi|84489363|ref|YP_447595.1|	-	0.0069	16.8	0.0	0.011	16.1	0.0	1.3	1	0	0	1	1	1	1	YejG-like	protein
T3RM_EcoP15I_C	PF18273.1	gi|84489363|ref|YP_447595.1|	-	0.059	13.7	0.1	0.13	12.6	0.1	1.6	1	0	0	1	1	1	0	Type	III	R-M	EcoP15I	C-terminal	domain
Flavodoxin_5	PF12724.7	gi|84489364|ref|YP_447596.1|	-	3.5e-09	37.0	0.2	0.00032	21.0	0.0	2.1	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_3	PF12641.7	gi|84489364|ref|YP_447596.1|	-	4.9e-09	36.1	1.2	0.00026	20.7	0.1	2.1	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_4	PF12682.7	gi|84489364|ref|YP_447596.1|	-	1.7e-06	27.8	0.3	1e-05	25.3	0.3	1.9	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_1	PF00258.25	gi|84489364|ref|YP_447596.1|	-	6.1e-05	23.3	0.1	0.0025	18.0	0.1	2.2	1	1	0	1	1	1	1	Flavodoxin
FMN_red	PF03358.15	gi|84489364|ref|YP_447596.1|	-	8.9e-05	22.3	0.0	9.5e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_3	PF12641.7	gi|84489365|ref|YP_447597.1|	-	4.2e-08	33.0	0.7	9.7e-07	28.6	0.7	2.1	1	1	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_4	PF12682.7	gi|84489365|ref|YP_447597.1|	-	1.7e-06	27.8	0.3	6e-05	22.8	0.3	2.1	1	1	0	1	1	1	1	Flavodoxin
FMN_red	PF03358.15	gi|84489365|ref|YP_447597.1|	-	3.5e-06	26.8	0.0	4.4e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_5	PF12724.7	gi|84489365|ref|YP_447597.1|	-	1.9e-05	24.9	0.1	0.079	13.2	0.0	2.2	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|84489365|ref|YP_447597.1|	-	0.0067	16.6	0.0	0.011	16.0	0.0	1.7	1	1	0	1	1	1	1	Flavodoxin
DNA_pol3_a_NII	PF11490.8	gi|84489365|ref|YP_447597.1|	-	0.14	12.1	0.5	0.25	11.3	0.5	1.3	1	0	0	1	1	1	0	DNA	polymerase	III	polC-type	N-terminus	II
FMN_red	PF03358.15	gi|84489366|ref|YP_447598.1|	-	0.03	14.1	0.0	0.038	13.7	0.0	1.2	1	0	0	1	1	1	0	NADPH-dependent	FMN	reductase
Mur_ligase_M	PF08245.12	gi|84489367|ref|YP_447599.1|	-	2e-26	93.2	6.7	2.5e-20	73.3	1.0	3.0	3	0	0	3	3	3	2	Mur	ligase	middle	domain
SecD_SecF	PF02355.16	gi|162316922|ref|YP_447600.2|	-	1.5e-36	125.6	9.2	2.5e-36	124.9	9.2	1.3	1	0	0	1	1	1	1	Protein	export	membrane	protein
Sec_GG	PF07549.14	gi|162316922|ref|YP_447600.2|	-	1.3e-06	27.7	1.6	1.4e-06	27.6	0.1	1.9	2	0	0	2	2	2	1	SecD/SecF	GG	Motif
Patched	PF02460.18	gi|162316922|ref|YP_447600.2|	-	0.0017	16.5	8.6	0.0023	16.1	8.6	1.3	1	0	0	1	1	1	1	Patched	family
ACR_tran	PF00873.19	gi|162316922|ref|YP_447600.2|	-	0.0091	13.7	7.8	0.014	13.1	7.8	1.3	1	0	0	1	1	1	1	AcrB/AcrD/AcrF	family
MMPL	PF03176.15	gi|162316922|ref|YP_447600.2|	-	0.3	10.0	16.4	0.68	8.8	16.4	1.5	1	0	0	1	1	1	0	MMPL	family
SecD_SecF	PF02355.16	gi|84489369|ref|YP_447601.1|	-	1.4e-16	60.4	9.4	1.4e-16	60.4	9.4	1.7	2	0	0	2	2	2	1	Protein	export	membrane	protein
Sec_GG	PF07549.14	gi|84489369|ref|YP_447601.1|	-	2e-06	27.1	0.0	3.9e-06	26.2	0.0	1.5	1	0	0	1	1	1	1	SecD/SecF	GG	Motif
UPF0154	PF03672.13	gi|84489369|ref|YP_447601.1|	-	0.07	13.2	0.2	0.2	11.7	0.2	1.8	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0154)
Patched	PF02460.18	gi|84489369|ref|YP_447601.1|	-	0.42	8.6	8.5	0.65	8.0	8.5	1.2	1	0	0	1	1	1	0	Patched	family
PPS_PS	PF02006.16	gi|84489370|ref|YP_447602.1|	-	1.8e-65	219.7	0.5	2.3e-65	219.5	0.5	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
MCM_N	PF14551.6	gi|84489370|ref|YP_447602.1|	-	0.13	12.8	0.7	0.44	11.2	0.1	2.1	2	1	0	2	2	2	0	MCM	N-terminal	domain
AAA_18	PF13238.6	gi|84489371|ref|YP_447603.1|	-	6.3e-11	42.9	0.4	6.3e-11	42.9	0.4	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|84489371|ref|YP_447603.1|	-	7.3e-11	42.6	3.5	1.3e-10	41.8	0.8	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|84489371|ref|YP_447603.1|	-	4.8e-06	26.8	1.4	4.8e-06	26.8	1.4	2.2	2	1	0	2	2	2	1	AAA	domain
ADK	PF00406.22	gi|84489371|ref|YP_447603.1|	-	0.00088	19.4	0.1	0.0016	18.5	0.1	1.5	1	0	0	1	1	1	1	Adenylate	kinase
CoaE	PF01121.20	gi|84489371|ref|YP_447603.1|	-	0.038	13.7	0.1	0.063	12.9	0.1	1.6	1	1	0	1	1	1	0	Dephospho-CoA	kinase
RNA_binding	PF01877.17	gi|84489372|ref|YP_447604.1|	-	3.8e-05	24.0	0.3	4.1e-05	23.8	0.3	1.1	1	0	0	1	1	1	1	RNA	binding
Diphthami_syn_2	PF01902.17	gi|84489373|ref|YP_447605.1|	-	2.9e-83	278.7	0.5	3.3e-83	278.5	0.5	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
QueC	PF06508.13	gi|84489373|ref|YP_447605.1|	-	0.00053	19.5	0.0	0.001	18.6	0.0	1.6	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
zf-ZPR1	PF03367.13	gi|84489373|ref|YP_447605.1|	-	0.14	12.0	0.0	0.26	11.1	0.0	1.4	1	0	0	1	1	1	0	ZPR1	zinc-finger	domain
DUF3536	PF12055.8	gi|84489374|ref|YP_447606.1|	-	0.042	13.2	0.1	0.074	12.3	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3536)
DUF4131	PF13567.6	gi|84489374|ref|YP_447606.1|	-	0.042	13.5	0.0	0.099	12.3	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
CNP1	PF08750.11	gi|84489374|ref|YP_447606.1|	-	0.057	13.4	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	CNP1-like	family
ACT_4	PF13291.6	gi|84489374|ref|YP_447606.1|	-	0.17	12.5	5.8	3.7	8.2	0.1	3.0	3	1	0	3	3	3	0	ACT	domain
ANAPC1	PF12859.7	gi|84489374|ref|YP_447606.1|	-	2.2	8.9	4.5	1.3	9.6	2.4	1.7	2	0	0	2	2	2	0	Anaphase-promoting	complex	subunit	1
Peptidase_M42	PF05343.14	gi|84489375|ref|YP_447607.1|	-	9.1e-105	349.8	4.0	1e-104	349.6	4.0	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|84489375|ref|YP_447607.1|	-	0.00014	21.7	0.2	0.00025	20.8	0.2	1.4	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|84489375|ref|YP_447607.1|	-	0.00014	21.6	0.1	0.099	12.3	0.0	2.4	2	1	0	2	2	2	2	Peptidase	family	M28
DUF2642	PF10842.8	gi|84489375|ref|YP_447607.1|	-	0.024	14.5	0.0	0.26	11.2	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2642)
Nmad2	PF18753.1	gi|84489376|ref|YP_447608.1|	-	0.0038	16.7	0.6	0.0061	16.0	0.6	1.3	1	0	0	1	1	1	1	Nucleotide	modification	associated	domain	2
THUMP	PF02926.17	gi|84489376|ref|YP_447608.1|	-	0.12	12.4	0.0	0.24	11.5	0.0	1.5	1	0	0	1	1	1	0	THUMP	domain
Chordopox_G3	PF06129.12	gi|84489376|ref|YP_447608.1|	-	1	10.1	5.7	0.9	10.3	1.1	2.5	2	1	0	2	2	2	0	Chordopoxvirus	G3	protein
Yip1	PF04893.17	gi|84489377|ref|YP_447609.1|	-	3.2e-09	36.7	21.2	4e-09	36.4	21.2	1.1	1	0	0	1	1	1	1	Yip1	domain
FMN_red	PF03358.15	gi|84489378|ref|YP_447610.1|	-	1e-17	64.3	0.0	1.1e-17	64.2	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489378|ref|YP_447610.1|	-	4.2e-14	52.7	0.0	5.2e-14	52.4	0.0	1.0	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_1	PF00258.25	gi|84489378|ref|YP_447610.1|	-	0.0031	17.7	0.0	0.016	15.4	0.0	1.8	2	0	0	2	2	2	1	Flavodoxin
RTX_C	PF08339.10	gi|84489379|ref|YP_447611.1|	-	0.019	15.1	0.5	0.16	12.0	0.8	1.9	2	0	0	2	2	2	0	RTX	C-terminal	domain
ComZ	PF10815.8	gi|84489379|ref|YP_447611.1|	-	0.11	12.5	1.8	0.65	10.0	0.4	2.1	2	0	0	2	2	2	0	ComZ
DUF3372	PF11852.8	gi|84489380|ref|YP_447612.1|	-	0.045	13.2	0.1	0.17	11.4	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3372)
Fer4_16	PF13484.6	gi|84489381|ref|YP_447613.1|	-	1.5e-07	32.2	6.3	5.8e-07	30.4	6.3	2.0	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|84489381|ref|YP_447613.1|	-	4.3e-06	26.3	14.0	0.0001	22.0	4.8	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Dehalogenase	PF13486.6	gi|84489381|ref|YP_447613.1|	-	1.9e-05	24.2	0.0	2.3e-05	24.0	0.0	1.1	1	0	0	1	1	1	1	Reductive	dehalogenase	subunit
Fer4_6	PF12837.7	gi|84489381|ref|YP_447613.1|	-	9.8e-05	22.3	12.6	0.0019	18.2	3.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489381|ref|YP_447613.1|	-	0.00043	20.4	7.7	0.0085	16.2	1.5	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489381|ref|YP_447613.1|	-	0.00057	20.4	7.9	0.0018	18.8	7.9	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489381|ref|YP_447613.1|	-	0.0015	18.6	8.1	0.0035	17.4	8.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489381|ref|YP_447613.1|	-	0.0069	16.9	5.9	0.019	15.5	5.9	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489381|ref|YP_447613.1|	-	0.018	15.2	10.4	0.071	13.2	2.6	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489381|ref|YP_447613.1|	-	0.032	15.2	12.2	0.84	10.7	4.4	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84489381|ref|YP_447613.1|	-	0.049	13.7	11.5	0.16	12.1	3.5	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489381|ref|YP_447613.1|	-	0.19	12.3	8.4	4.6	8.0	1.0	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|84489381|ref|YP_447613.1|	-	0.4	10.9	8.7	4.6	7.5	2.8	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489381|ref|YP_447613.1|	-	0.5	10.8	7.7	1.9	9.0	7.7	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
UvrC_HhH_N	PF08459.11	gi|84489382|ref|YP_447614.1|	-	3.1e-49	166.8	0.2	1.1e-48	165.1	0.0	2.0	2	1	0	2	2	2	1	UvrC	Helix-hairpin-helix	N-terminal
GIY-YIG	PF01541.24	gi|84489382|ref|YP_447614.1|	-	2e-12	47.2	1.3	2e-12	47.2	1.3	3.2	4	0	0	4	4	4	1	GIY-YIG	catalytic	domain
HHH_2	PF12826.7	gi|84489382|ref|YP_447614.1|	-	4.6e-11	42.6	0.1	2.1e-10	40.5	0.0	2.2	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|84489382|ref|YP_447614.1|	-	7.4e-11	42.5	0.2	2.4e-10	40.9	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
UVR	PF02151.19	gi|84489382|ref|YP_447614.1|	-	4.7e-09	35.7	1.7	1.3e-08	34.3	1.7	1.8	1	0	0	1	1	1	1	UvrB/uvrC	motif
HHH	PF00633.23	gi|84489382|ref|YP_447614.1|	-	1.5e-06	27.8	0.0	0.0052	16.6	0.0	2.7	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|84489382|ref|YP_447614.1|	-	0.0018	18.9	0.1	0.0018	18.9	0.1	3.0	3	0	0	3	3	3	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_3	PF12836.7	gi|84489382|ref|YP_447614.1|	-	0.097	12.9	0.1	0.82	10.0	0.0	2.4	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
Bin3	PF06859.12	gi|84489382|ref|YP_447614.1|	-	0.21	12.3	1.8	0.84	10.3	0.0	2.8	2	0	0	2	2	2	0	Bicoid-interacting	protein	3	(Bin3)
UvrB_inter	PF17757.1	gi|84489383|ref|YP_447615.1|	-	2.3e-33	114.2	1.0	2.3e-33	114.2	1.0	2.8	2	0	0	2	2	2	1	UvrB	interaction	domain
UvrB	PF12344.8	gi|84489383|ref|YP_447615.1|	-	2.4e-18	65.7	0.8	5.8e-18	64.5	0.8	1.7	1	0	0	1	1	1	1	Ultra-violet	resistance	protein	B
Helicase_C	PF00271.31	gi|84489383|ref|YP_447615.1|	-	3.5e-18	65.9	0.3	1.9e-17	63.6	0.0	2.4	2	1	1	3	3	2	1	Helicase	conserved	C-terminal	domain
UVR	PF02151.19	gi|84489383|ref|YP_447615.1|	-	2.2e-12	46.3	10.2	1e-11	44.2	10.2	2.3	1	0	0	1	1	1	1	UvrB/uvrC	motif
ResIII	PF04851.15	gi|84489383|ref|YP_447615.1|	-	1.9e-11	44.3	0.1	1.9e-11	44.3	0.1	3.6	3	1	0	4	4	4	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|84489383|ref|YP_447615.1|	-	3.1e-05	23.8	0.4	0.0029	17.4	0.0	3.6	4	0	0	4	4	4	1	DEAD/DEAH	box	helicase
AAA_30	PF13604.6	gi|84489383|ref|YP_447615.1|	-	5.6e-05	22.9	0.1	0.038	13.7	0.0	3.5	3	1	0	3	3	3	1	AAA	domain
Microtub_bd	PF16796.5	gi|84489383|ref|YP_447615.1|	-	0.0012	18.8	0.1	0.13	12.2	0.0	3.2	2	0	0	2	2	2	1	Microtubule	binding
AAA_22	PF13401.6	gi|84489383|ref|YP_447615.1|	-	0.02	15.2	0.0	0.16	12.2	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
Kinesin	PF00225.23	gi|84489383|ref|YP_447615.1|	-	0.025	13.5	2.0	0.05	12.5	0.0	2.2	2	0	0	2	2	2	0	Kinesin	motor	domain
FliG_N	PF14842.6	gi|84489383|ref|YP_447615.1|	-	0.035	14.7	3.9	0.036	14.6	1.6	2.3	2	0	0	2	2	1	0	FliG	N-terminal	domain
MDH	PF02315.16	gi|84489383|ref|YP_447615.1|	-	0.14	12.3	0.1	0.36	10.9	0.1	1.6	1	0	0	1	1	1	0	Methanol	dehydrogenase	beta	subunit
AAA	PF00004.29	gi|84489383|ref|YP_447615.1|	-	0.37	11.2	2.2	4.1	7.8	0.0	3.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4795	PF16043.5	gi|84489383|ref|YP_447615.1|	-	1.2	8.7	10.2	0.13	11.8	2.1	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4795)
AAA_17	PF13207.6	gi|84489383|ref|YP_447615.1|	-	2.4	8.6	7.7	17	5.8	0.0	3.6	3	0	0	3	3	3	0	AAA	domain
EMC3_TMCO1	PF01956.16	gi|84489383|ref|YP_447615.1|	-	2.8	7.6	6.9	20	4.9	0.2	2.5	2	0	0	2	2	2	0	Integral	membrane	protein	EMC3/TMCO1-like
Terminase_2	PF03592.16	gi|84489383|ref|YP_447615.1|	-	5.6	7.4	16.9	16	5.9	0.6	3.8	4	0	0	4	4	4	0	Terminase	small	subunit
DUF883	PF05957.13	gi|84489383|ref|YP_447615.1|	-	5.7	7.6	6.6	19	5.9	1.1	3.7	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF883)
UvrA_inter	PF17760.1	gi|84489384|ref|YP_447616.1|	-	2.5e-37	127.3	3.2	7.3e-37	125.8	3.2	1.9	1	0	0	1	1	1	1	UvrA	interaction	domain
UvrA_DNA-bind	PF17755.1	gi|84489384|ref|YP_447616.1|	-	7.4e-36	122.8	0.2	5.8e-34	116.7	0.1	2.9	2	0	0	2	2	2	1	UvrA	DNA-binding	domain
ABC_tran	PF00005.27	gi|84489384|ref|YP_447616.1|	-	4.3e-22	79.1	0.2	1.6e-10	41.6	0.1	4.3	3	1	0	3	3	3	3	ABC	transporter
SMC_N	PF02463.19	gi|84489384|ref|YP_447616.1|	-	2.7e-13	49.9	1.6	0.046	13.1	0.0	4.2	3	1	0	4	4	4	4	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|84489384|ref|YP_447616.1|	-	8e-08	31.9	0.0	0.012	15.3	0.0	2.7	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|84489384|ref|YP_447616.1|	-	1e-07	32.5	0.1	0.015	15.7	0.0	3.0	3	0	0	3	3	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|84489384|ref|YP_447616.1|	-	2e-06	27.8	0.1	0.022	14.7	0.1	2.6	2	0	0	2	2	2	2	RsgA	GTPase
DnaJ_CXXCXGXG	PF00684.19	gi|84489384|ref|YP_447616.1|	-	2.9e-06	27.5	2.3	0.086	13.2	0.4	3.7	3	0	0	3	3	3	1	DnaJ	central	domain
AAA_21	PF13304.6	gi|84489384|ref|YP_447616.1|	-	1.5e-05	24.9	7.2	0.035	13.9	0.0	4.4	4	0	0	4	4	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|84489384|ref|YP_447616.1|	-	2.6e-05	24.5	4.2	0.081	13.2	0.2	4.3	5	0	0	5	5	4	2	AAA	domain
BCA_ABC_TP_C	PF12399.8	gi|84489384|ref|YP_447616.1|	-	2.6e-05	24.0	2.4	0.17	11.9	0.2	2.9	2	0	0	2	2	2	2	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_23	PF13476.6	gi|84489384|ref|YP_447616.1|	-	3.2e-05	24.5	10.9	0.017	15.6	0.1	3.9	4	1	0	4	4	4	2	AAA	domain
AAA_33	PF13671.6	gi|84489384|ref|YP_447616.1|	-	4.1e-05	23.8	0.1	0.23	11.6	0.0	3.5	3	0	0	3	3	3	1	AAA	domain
AAA_18	PF13238.6	gi|84489384|ref|YP_447616.1|	-	5.4e-05	23.8	0.1	0.16	12.5	0.1	3.2	2	0	0	2	2	2	1	AAA	domain
ATPase	PF06745.13	gi|84489384|ref|YP_447616.1|	-	0.00024	20.5	1.2	0.3	10.4	0.0	3.1	3	0	0	3	3	3	2	KaiC
AAA_25	PF13481.6	gi|84489384|ref|YP_447616.1|	-	0.00056	19.5	0.0	0.49	10.0	0.0	3.2	4	0	0	4	4	3	1	AAA	domain
AAA_14	PF13173.6	gi|84489384|ref|YP_447616.1|	-	0.0009	19.3	0.1	2.6	8.1	0.1	3.6	3	0	0	3	3	3	1	AAA	domain
APS_kinase	PF01583.20	gi|84489384|ref|YP_447616.1|	-	0.0011	18.9	0.1	1.6	8.6	0.0	2.8	2	0	0	2	2	2	2	Adenylylsulphate	kinase
NACHT	PF05729.12	gi|84489384|ref|YP_447616.1|	-	0.0018	18.2	0.1	0.22	11.5	0.2	2.3	2	0	0	2	2	2	1	NACHT	domain
cobW	PF02492.19	gi|84489384|ref|YP_447616.1|	-	0.0025	17.4	0.2	0.24	11.0	0.1	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
zinc_ribbon_9	PF14369.6	gi|84489384|ref|YP_447616.1|	-	0.0027	17.9	4.4	1.8	8.9	0.0	4.3	4	0	0	4	4	4	1	zinc-ribbon
MMR_HSR1	PF01926.23	gi|84489384|ref|YP_447616.1|	-	0.0034	17.5	0.7	0.66	10.1	0.1	3.4	3	0	0	3	3	3	1	50S	ribosome-binding	GTPase
DUF2075	PF09848.9	gi|84489384|ref|YP_447616.1|	-	0.0077	15.5	0.2	2	7.5	0.1	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ATPase_2	PF01637.18	gi|84489384|ref|YP_447616.1|	-	0.01	15.8	3.6	0.65	9.9	0.0	3.1	3	0	0	3	3	3	0	ATPase	domain	predominantly	from	Archaea
Viral_helicase1	PF01443.18	gi|84489384|ref|YP_447616.1|	-	0.012	15.4	0.2	0.22	11.2	0.3	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
RNA12	PF10443.9	gi|84489384|ref|YP_447616.1|	-	0.016	14.0	0.0	2.6	6.7	0.0	2.2	2	0	0	2	2	2	0	RNA12	protein
Zn-ribbon_8	PF09723.10	gi|84489384|ref|YP_447616.1|	-	0.019	15.1	8.9	0.34	11.1	0.3	4.3	4	0	0	4	4	4	0	Zinc	ribbon	domain
MeaB	PF03308.16	gi|84489384|ref|YP_447616.1|	-	0.027	13.4	0.0	0.45	9.5	0.0	2.3	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
T2SSE	PF00437.20	gi|84489384|ref|YP_447616.1|	-	0.029	13.4	0.9	1.6	7.7	0.0	2.8	3	0	0	3	3	3	0	Type	II/IV	secretion	system	protein
NTPase_1	PF03266.15	gi|84489384|ref|YP_447616.1|	-	0.038	13.9	2.9	0.31	10.9	0.1	3.2	3	0	0	3	3	3	0	NTPase
AAA_15	PF13175.6	gi|84489384|ref|YP_447616.1|	-	0.038	13.7	15.6	0.38	10.4	0.1	5.0	5	1	0	5	5	5	0	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|84489384|ref|YP_447616.1|	-	0.05	12.8	0.0	2.2	7.4	0.0	2.4	2	0	0	2	2	2	0	NB-ARC	domain
RNA_helicase	PF00910.22	gi|84489384|ref|YP_447616.1|	-	0.054	13.9	0.2	4.2	7.8	0.1	2.8	2	0	0	2	2	2	0	RNA	helicase
IstB_IS21	PF01695.17	gi|84489384|ref|YP_447616.1|	-	0.077	12.7	2.7	18	5.0	0.0	3.6	4	0	0	4	4	4	0	IstB-like	ATP	binding	protein
Sigma54_activat	PF00158.26	gi|84489384|ref|YP_447616.1|	-	0.083	12.6	0.0	2.4	7.8	0.0	2.4	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_28	PF13521.6	gi|84489384|ref|YP_447616.1|	-	0.092	13.0	0.3	7.6	6.7	0.2	2.7	3	0	0	3	3	2	0	AAA	domain
AAA_24	PF13479.6	gi|84489384|ref|YP_447616.1|	-	0.094	12.4	4.8	2.1	8.0	0.1	3.6	4	0	0	4	4	3	0	AAA	domain
PRK	PF00485.18	gi|84489384|ref|YP_447616.1|	-	0.096	12.4	0.1	2.9	7.6	0.0	2.4	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_30	PF13604.6	gi|84489384|ref|YP_447616.1|	-	0.12	12.1	0.1	18	5.0	0.1	2.9	3	0	0	3	3	3	0	AAA	domain
DUF87	PF01935.17	gi|84489384|ref|YP_447616.1|	-	0.52	10.4	4.8	1.6	8.7	0.1	3.7	5	0	0	5	5	4	0	Helicase	HerA,	central	domain
Lactamase_B_2	PF12706.7	gi|84489385|ref|YP_447617.1|	-	3.7e-22	78.8	0.1	4.8e-22	78.5	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|84489385|ref|YP_447617.1|	-	1.1e-15	57.9	0.2	1.8e-15	57.2	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|84489385|ref|YP_447617.1|	-	8.8e-05	22.6	1.3	0.00013	22.0	1.3	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DHquinase_I	PF01487.15	gi|84489386|ref|YP_447618.1|	-	2.8e-52	178.2	0.2	3.2e-52	178.1	0.2	1.0	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
Chorismate_synt	PF01264.21	gi|84489388|ref|YP_447620.1|	-	5e-131	436.3	1.6	5.6e-131	436.1	1.6	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Phage_TAC_12	PF12363.8	gi|84489388|ref|YP_447620.1|	-	0.085	13.3	0.1	0.2	12.1	0.1	1.6	1	0	0	1	1	1	0	Phage	tail	assembly	chaperone	protein,	TAC
GATase_3	PF07685.14	gi|84489389|ref|YP_447621.1|	-	1.8e-36	125.6	0.3	2.3e-36	125.2	0.3	1.1	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|84489389|ref|YP_447621.1|	-	0.0041	16.9	0.0	0.0051	16.6	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.24	gi|84489389|ref|YP_447621.1|	-	0.012	15.5	0.0	0.017	14.9	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
ADP_PFK_GK	PF04587.15	gi|84489389|ref|YP_447621.1|	-	0.062	11.9	0.0	0.1	11.1	0.0	1.3	1	0	0	1	1	1	0	ADP-specific	Phosphofructokinase/Glucokinase	conserved	region
DUF1727	PF08353.10	gi|84489390|ref|YP_447622.1|	-	1e-34	118.7	0.8	2.3e-34	117.6	0.8	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1727)
Mur_ligase_M	PF08245.12	gi|84489390|ref|YP_447622.1|	-	6.8e-23	81.7	1.8	4e-20	72.6	0.6	2.6	2	1	0	2	2	2	1	Mur	ligase	middle	domain
DHHA1	PF02272.19	gi|84489390|ref|YP_447622.1|	-	0.031	14.7	0.2	9.6	6.6	0.0	2.9	3	0	0	3	3	3	0	DHHA1	domain
Zn_Tnp_IS1595	PF12760.7	gi|84489390|ref|YP_447622.1|	-	0.066	13.2	1.3	0.11	12.5	1.3	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
PADR1	PF08063.12	gi|84489390|ref|YP_447622.1|	-	4.9	7.0	7.5	5.3	6.9	5.1	2.1	2	0	0	2	2	2	0	PADR1	(NUC008)	domain
YhfH	PF14149.6	gi|84489390|ref|YP_447622.1|	-	6.5	6.8	6.7	16	5.6	6.7	1.6	1	0	0	1	1	1	0	YhfH-like	protein
CoA_binding	PF02629.19	gi|84489392|ref|YP_447624.1|	-	7.4e-27	93.9	4.4	5.8e-26	91.0	1.4	2.5	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.19	gi|84489392|ref|YP_447624.1|	-	2.6e-15	56.6	0.4	5.1e-15	55.6	0.4	1.5	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.6	gi|84489392|ref|YP_447624.1|	-	1.5e-09	37.8	0.0	2.4e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|84489392|ref|YP_447624.1|	-	0.0002	21.8	0.0	0.00063	20.2	0.0	1.8	2	0	0	2	2	2	1	CoA	binding	domain
HMG-CoA_red	PF00368.18	gi|84489393|ref|YP_447625.1|	-	1.2e-131	439.1	5.4	1.3e-131	438.9	5.4	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
VIT1	PF01988.19	gi|84489394|ref|YP_447626.1|	-	5.7e-14	52.5	16.0	5.8e-11	42.7	1.0	2.1	1	1	1	2	2	2	2	VIT	family
DUF1700	PF08006.11	gi|84489394|ref|YP_447626.1|	-	4.4	6.8	9.8	0.95	9.0	6.0	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1700)
ILEI	PF15711.5	gi|84489395|ref|YP_447627.1|	-	0.12	12.9	0.2	0.13	12.7	0.2	1.1	1	0	0	1	1	1	0	Interleukin-like	EMT	inducer
DUF5381	PF17353.2	gi|84489396|ref|YP_447628.1|	-	0.015	15.1	0.9	0.031	14.0	0.9	1.5	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5381)
DUF4064	PF13273.6	gi|84489396|ref|YP_447628.1|	-	0.3	11.4	25.4	0.072	13.4	15.1	3.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4064)
PALP	PF00291.25	gi|84489397|ref|YP_447629.1|	-	7e-77	258.7	1.3	8.1e-77	258.5	1.3	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
AAA_18	PF13238.6	gi|84489398|ref|YP_447630.1|	-	9.3e-23	81.2	0.1	1.3e-22	80.8	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|84489398|ref|YP_447630.1|	-	6.5e-07	29.8	0.1	2.3e-06	28.1	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|84489398|ref|YP_447630.1|	-	3.6e-05	23.7	1.0	0.057	13.3	0.5	2.2	1	1	0	2	2	2	2	Deoxynucleoside	kinase
AAA	PF00004.29	gi|84489398|ref|YP_447630.1|	-	0.0001	22.7	0.1	0.0002	21.8	0.1	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|84489398|ref|YP_447630.1|	-	0.00021	21.6	0.1	0.00032	21.0	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.22	gi|84489398|ref|YP_447630.1|	-	0.00048	20.3	0.4	0.31	11.1	0.0	2.6	1	1	1	3	3	3	1	Adenylate	kinase
AAA_22	PF13401.6	gi|84489398|ref|YP_447630.1|	-	0.00088	19.6	0.1	0.0019	18.5	0.1	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|84489398|ref|YP_447630.1|	-	0.00089	19.4	0.0	0.14	12.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|84489398|ref|YP_447630.1|	-	0.0016	18.2	0.1	0.11	12.1	0.1	2.1	2	0	0	2	2	2	1	Thymidylate	kinase
KTI12	PF08433.10	gi|84489398|ref|YP_447630.1|	-	0.0021	17.6	0.0	0.0033	16.9	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.15	gi|84489398|ref|YP_447630.1|	-	0.0026	17.7	0.3	0.0058	16.6	0.3	1.7	1	0	0	1	1	1	1	NTPase
RNA_helicase	PF00910.22	gi|84489398|ref|YP_447630.1|	-	0.0049	17.2	0.1	0.044	14.2	0.0	2.1	2	0	0	2	2	2	1	RNA	helicase
SKI	PF01202.22	gi|84489398|ref|YP_447630.1|	-	0.0068	16.5	0.0	1.1	9.4	0.0	2.1	2	0	0	2	2	2	1	Shikimate	kinase
AAA_5	PF07728.14	gi|84489398|ref|YP_447630.1|	-	0.007	16.4	0.1	0.025	14.6	0.0	2.0	2	1	1	3	3	3	1	AAA	domain	(dynein-related	subfamily)
T2SSE	PF00437.20	gi|84489398|ref|YP_447630.1|	-	0.009	15.1	1.8	0.014	14.5	1.8	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_30	PF13604.6	gi|84489398|ref|YP_447630.1|	-	0.01	15.6	0.1	0.015	15.1	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.12	gi|84489398|ref|YP_447630.1|	-	0.01	15.6	0.1	0.016	15.0	0.1	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Cytidylate_kin	PF02224.18	gi|84489398|ref|YP_447630.1|	-	0.011	15.5	0.2	0.13	11.9	0.0	2.1	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_19	PF13245.6	gi|84489398|ref|YP_447630.1|	-	0.013	15.8	0.3	0.022	15.1	0.3	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|84489398|ref|YP_447630.1|	-	0.018	15.5	0.0	0.018	15.5	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_24	PF13479.6	gi|84489398|ref|YP_447630.1|	-	0.019	14.7	0.0	0.03	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|84489398|ref|YP_447630.1|	-	0.023	14.0	0.1	0.046	13.0	0.1	1.5	1	0	0	1	1	1	0	Zeta	toxin
APS_kinase	PF01583.20	gi|84489398|ref|YP_447630.1|	-	0.028	14.3	0.0	0.034	14.0	0.0	1.2	1	0	0	1	1	1	0	Adenylylsulphate	kinase
DUF2075	PF09848.9	gi|84489398|ref|YP_447630.1|	-	0.03	13.6	0.0	0.032	13.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Hydin_ADK	PF17213.3	gi|84489398|ref|YP_447630.1|	-	0.058	13.7	0.1	0.11	12.8	0.1	1.4	1	0	0	1	1	1	0	Hydin	Adenylate	kinase-like	domain
Rad17	PF03215.15	gi|84489398|ref|YP_447630.1|	-	0.063	13.2	0.1	0.094	12.6	0.1	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
Viral_helicase1	PF01443.18	gi|84489398|ref|YP_447630.1|	-	0.065	13.0	0.0	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_3	PF07726.11	gi|84489398|ref|YP_447630.1|	-	0.16	11.8	0.0	0.26	11.2	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
CoaE	PF01121.20	gi|84489398|ref|YP_447630.1|	-	0.17	11.5	0.5	1.3	8.7	0.2	2.2	2	1	0	2	2	2	0	Dephospho-CoA	kinase
TrwB_AAD_bind	PF10412.9	gi|84489398|ref|YP_447630.1|	-	0.29	10.0	0.8	0.44	9.4	0.8	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ABC_tran	PF00005.27	gi|84489398|ref|YP_447630.1|	-	1	9.8	2.8	1.5	9.3	2.8	1.7	1	1	0	1	1	1	0	ABC	transporter
Big_3_5	PF16640.5	gi|84489399|ref|YP_447631.1|	-	7.7e-117	381.8	286.7	1.3e-09	38.1	2.2	27.3	26	1	1	27	27	27	25	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|84489399|ref|YP_447631.1|	-	4.9e-103	337.6	159.8	7.6e-05	22.9	0.8	25.9	26	0	0	26	26	26	24	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|84489399|ref|YP_447631.1|	-	5.9e-72	237.6	202.6	7.3e-06	25.9	2.7	27.8	28	0	0	28	28	28	24	Bacterial	Ig-like	domain	(group	1)
CarbopepD_reg_2	PF13715.6	gi|84489399|ref|YP_447631.1|	-	3.6e-15	55.7	250.9	0.045	13.8	4.5	26.0	26	0	0	26	26	26	21	CarboxypepD_reg-like	domain
Invasin_D3	PF09134.10	gi|84489399|ref|YP_447631.1|	-	8.8e-15	54.8	272.2	0.00042	20.6	1.4	27.9	29	1	1	30	30	29	18	Invasin,	domain	3
DUF5122	PF17164.4	gi|84489399|ref|YP_447631.1|	-	7.2e-12	45.4	74.7	0.3	11.4	0.6	17.6	17	0	0	17	17	17	5	Domain	of	unknown	function	(DUF5122)	beta-propeller
Dioxygenase_C	PF00775.21	gi|84489399|ref|YP_447631.1|	-	1.1e-05	25.0	41.7	8.1	5.8	0.1	19.0	19	6	2	22	22	22	2	Dioxygenase
Filamin	PF00630.19	gi|84489399|ref|YP_447631.1|	-	5.3e-05	24.0	0.7	5.3e-05	24.0	0.7	20.0	7	5	5	13	13	11	4	Filamin/ABP280	repeat
CooC_C	PF15976.5	gi|84489399|ref|YP_447631.1|	-	0.00019	21.4	99.0	0.38	10.8	0.1	23.3	24	1	1	25	25	25	3	CS1-pili	formation	C-terminal
phage_tail_N	PF08400.10	gi|84489399|ref|YP_447631.1|	-	0.002	18.1	55.3	20	5.2	0.2	18.9	20	0	0	20	20	20	0	Prophage	tail	fibre	N-terminal
MG2	PF01835.19	gi|84489399|ref|YP_447631.1|	-	0.0074	16.7	7.4	0.071	13.6	0.3	6.7	8	0	0	8	8	6	1	MG2	domain
MYCBPAP	PF14646.6	gi|84489399|ref|YP_447631.1|	-	0.59	9.0	5.6	1.6	7.6	5.6	1.7	1	0	0	1	1	1	0	MYCBP-associated	protein	family
Pro_CA	PF00484.19	gi|84489400|ref|YP_447632.1|	-	2.4e-07	31.2	0.0	3.1e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	Carbonic	anhydrase
Rpr2	PF04032.16	gi|84489401|ref|YP_447633.1|	-	3.5e-14	52.8	0.2	4.5e-14	52.5	0.2	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DZR	PF12773.7	gi|84489401|ref|YP_447633.1|	-	0.021	14.9	0.2	0.032	14.3	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
CRS1_YhbY	PF01985.21	gi|84489402|ref|YP_447634.1|	-	3.1e-15	56.1	1.3	3.5e-15	55.9	1.3	1.1	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF5499	PF17603.2	gi|84489402|ref|YP_447634.1|	-	0.053	14.1	0.5	0.063	13.9	0.5	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5499)
DUF1269	PF06897.12	gi|84489402|ref|YP_447634.1|	-	0.059	13.7	0.0	0.075	13.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1269)
LAMTOR	PF15454.6	gi|84489402|ref|YP_447634.1|	-	0.29	11.8	0.1	0.29	11.8	0.1	1.8	2	1	0	2	2	2	0	Late	endosomal/lysosomal	adaptor	and	MAPK	and	MTOR	activator
Ribosomal_S19e	PF01090.19	gi|84489403|ref|YP_447635.1|	-	3.1e-56	188.9	0.0	3.4e-56	188.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
RuvB_C	PF05491.13	gi|84489403|ref|YP_447635.1|	-	0.043	13.7	0.0	1.2	9.1	0.0	2.2	2	0	0	2	2	2	0	RuvB	C-terminal	winged	helix	domain
dsDNA_bind	PF01984.20	gi|84489404|ref|YP_447636.1|	-	4.6e-25	88.1	25.3	5.1e-25	87.9	25.3	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
DUF4355	PF14265.6	gi|84489404|ref|YP_447636.1|	-	0.35	11.1	13.6	0.48	10.7	13.6	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
Staphylokinase	PF02821.16	gi|84489404|ref|YP_447636.1|	-	1.8	9.0	5.6	0.64	10.5	1.0	2.0	1	1	1	2	2	2	0	Staphylokinase/Streptokinase	family
QueC	PF06508.13	gi|84489405|ref|YP_447637.1|	-	0.00018	21.1	0.0	0.00024	20.7	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|84489405|ref|YP_447637.1|	-	0.00018	21.3	0.0	0.00022	21.0	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.16	gi|84489405|ref|YP_447637.1|	-	0.022	13.6	0.1	0.047	12.5	0.1	1.7	1	1	0	1	1	1	0	tRNA	methyl	transferase
Diphthami_syn_2	PF01902.17	gi|84489405|ref|YP_447637.1|	-	0.044	13.3	0.0	0.072	12.6	0.0	1.4	1	0	0	1	1	1	0	Diphthamide	synthase
ATP_bind_3	PF01171.20	gi|84489405|ref|YP_447637.1|	-	0.058	13.1	0.0	0.11	12.2	0.0	1.5	1	1	0	1	1	1	0	PP-loop	family
Peptidase_C39	PF03412.15	gi|84489405|ref|YP_447637.1|	-	0.11	12.3	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Peptidase	C39	family
Spore_YunB	PF09560.10	gi|84489405|ref|YP_447637.1|	-	0.14	12.2	0.0	0.24	11.4	0.0	1.5	1	0	0	1	1	1	0	Sporulation	protein	YunB	(Spo_YunB)
Ribosomal_L31e	PF01198.19	gi|84489406|ref|YP_447638.1|	-	1.2e-16	60.7	2.2	1.3e-16	60.5	2.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
DUF2458	PF10454.9	gi|84489406|ref|YP_447638.1|	-	0.013	15.1	0.3	0.016	14.9	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2458)
eIF-6	PF01912.18	gi|84489407|ref|YP_447639.1|	-	8.7e-70	234.1	4.8	1.1e-69	233.8	4.8	1.2	1	0	0	1	1	1	1	eIF-6	family
PrpR_N	PF06506.11	gi|84489407|ref|YP_447639.1|	-	0.00093	18.8	0.2	0.029	13.9	0.0	2.2	2	0	0	2	2	2	2	Propionate	catabolism	activator
Ribosomal_L18A	PF01775.17	gi|84489408|ref|YP_447640.1|	-	2e-09	37.6	0.0	4e-09	36.6	0.0	1.4	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
Prefoldin	PF02996.17	gi|84489409|ref|YP_447641.1|	-	1e-19	70.6	6.6	1e-19	70.6	6.6	1.5	1	1	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.20	gi|84489409|ref|YP_447641.1|	-	1.1e-05	25.3	17.9	0.0049	16.8	5.5	2.1	1	1	1	2	2	2	2	Prefoldin	subunit
GOLGA2L5	PF15070.6	gi|84489409|ref|YP_447641.1|	-	0.0037	16.0	10.1	0.028	13.1	0.9	2.0	2	0	0	2	2	2	2	Putative	golgin	subfamily	A	member	2-like	protein	5
Baculo_PEP_C	PF04513.12	gi|84489409|ref|YP_447641.1|	-	0.0038	17.3	5.0	0.18	11.8	1.9	2.1	2	0	0	2	2	2	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
T4SS	PF07996.11	gi|84489409|ref|YP_447641.1|	-	0.0053	17.2	3.2	0.0053	17.2	3.2	1.9	2	0	0	2	2	2	1	Type	IV	secretion	system	proteins
DHR10	PF18595.1	gi|84489409|ref|YP_447641.1|	-	0.0057	16.7	16.0	0.071	13.2	4.3	2.1	2	0	0	2	2	2	2	Designed	helical	repeat	protein	10	domain
DUF2205	PF10224.9	gi|84489409|ref|YP_447641.1|	-	0.0076	16.2	13.3	0.38	10.8	3.5	2.4	2	1	0	2	2	2	2	Short	coiled-coil	protein
KDGP_aldolase	PF07071.11	gi|84489409|ref|YP_447641.1|	-	0.017	14.9	0.3	0.02	14.7	0.3	1.2	1	0	0	1	1	1	0	KDGP	aldolase
GTP-bdg_M	PF16360.5	gi|84489409|ref|YP_447641.1|	-	0.02	15.5	3.8	0.53	10.9	0.2	2.3	2	0	0	2	2	2	0	GTP-binding	GTPase	Middle	Region
XhlA	PF10779.9	gi|84489409|ref|YP_447641.1|	-	0.022	14.9	9.1	0.051	13.8	1.7	2.3	2	0	0	2	2	2	0	Haemolysin	XhlA
DUF3251	PF11622.8	gi|84489409|ref|YP_447641.1|	-	0.023	14.4	0.9	0.023	14.4	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3251)
Filament	PF00038.21	gi|84489409|ref|YP_447641.1|	-	0.024	14.2	1.1	0.024	14.2	1.1	2.0	2	0	0	2	2	2	0	Intermediate	filament	protein
FlaC_arch	PF05377.11	gi|84489409|ref|YP_447641.1|	-	0.025	15.0	1.9	0.025	15.0	1.9	2.8	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Tektin	PF03148.14	gi|84489409|ref|YP_447641.1|	-	0.026	13.3	9.0	0.25	10.1	0.7	2.0	2	0	0	2	2	2	0	Tektin	family
DUF948	PF06103.11	gi|84489409|ref|YP_447641.1|	-	0.03	14.6	6.6	1.7	9.0	0.2	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF4795	PF16043.5	gi|84489409|ref|YP_447641.1|	-	0.032	13.8	10.5	0.037	13.6	2.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4795)
HrpB7	PF09486.10	gi|84489409|ref|YP_447641.1|	-	0.042	14.2	4.6	0.23	11.8	1.2	2.1	2	0	0	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
NPV_P10	PF05531.12	gi|84489409|ref|YP_447641.1|	-	0.046	14.2	8.0	0.34	11.4	4.0	2.1	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Taxilin	PF09728.9	gi|84489409|ref|YP_447641.1|	-	0.059	12.5	12.1	0.69	9.0	1.9	2.0	2	0	0	2	2	2	0	Myosin-like	coiled-coil	protein
Syntaxin_2	PF14523.6	gi|84489409|ref|YP_447641.1|	-	0.075	13.4	10.9	0.18	12.2	0.6	2.4	2	1	0	2	2	2	0	Syntaxin-like	protein
DUF1664	PF07889.12	gi|84489409|ref|YP_447641.1|	-	0.08	13.0	8.8	0.66	10.0	1.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
E2F_CC-MB	PF16421.5	gi|84489409|ref|YP_447641.1|	-	0.084	13.2	8.2	0.23	11.8	0.9	2.2	2	0	0	2	2	2	0	E2F	transcription	factor	CC-MB	domain
LPP	PF04728.13	gi|84489409|ref|YP_447641.1|	-	0.097	13.1	6.2	1.2	9.6	2.4	2.5	2	0	0	2	2	2	0	Lipoprotein	leucine-zipper
TACC_C	PF05010.14	gi|84489409|ref|YP_447641.1|	-	0.1	12.4	9.8	0.44	10.3	1.0	2.1	2	0	0	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
ADIP	PF11559.8	gi|84489409|ref|YP_447641.1|	-	0.1	12.7	11.8	0.41	10.7	0.7	2.2	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Seryl_tRNA_N	PF02403.22	gi|84489409|ref|YP_447641.1|	-	0.1	12.8	11.9	0.43	10.8	3.8	2.2	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Mce4_CUP1	PF11887.8	gi|84489409|ref|YP_447641.1|	-	0.11	12.0	1.9	2.1	7.7	0.3	2.0	2	0	0	2	2	2	0	Cholesterol	uptake	porter	CUP1	of	Mce4,	putative
Sigma70_ner	PF04546.13	gi|84489409|ref|YP_447641.1|	-	0.14	12.1	6.0	0.071	13.0	0.7	2.0	2	0	0	2	2	2	0	Sigma-70,	non-essential	region
COMM_domain	PF07258.14	gi|84489409|ref|YP_447641.1|	-	0.15	12.2	3.5	1	9.5	0.1	2.4	2	1	0	2	2	2	0	COMM	domain
DUF5082	PF16888.5	gi|84489409|ref|YP_447641.1|	-	0.17	12.2	10.0	1.7	8.9	4.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
FlxA	PF14282.6	gi|84489409|ref|YP_447641.1|	-	0.18	11.8	19.4	1.5	8.9	3.0	2.2	2	0	0	2	2	2	0	FlxA-like	protein
Med30	PF11315.8	gi|84489409|ref|YP_447641.1|	-	0.18	12.0	8.6	0.71	10.1	0.9	2.2	1	1	1	2	2	2	0	Mediator	complex	subunit	30
CENP-F_leu_zip	PF10473.9	gi|84489409|ref|YP_447641.1|	-	0.2	11.7	13.9	0.3	11.1	2.8	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF4763	PF15960.5	gi|84489409|ref|YP_447641.1|	-	0.22	10.8	9.1	0.12	11.7	3.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4763)
Nas2_N	PF18265.1	gi|84489409|ref|YP_447641.1|	-	0.23	11.4	4.4	2.6	8.0	0.2	2.5	2	0	0	2	2	2	0	Nas2	N_terminal	domain
YabA	PF06156.13	gi|84489409|ref|YP_447641.1|	-	0.24	12.1	7.6	1.2	9.9	3.6	2.1	1	1	1	2	2	2	0	Initiation	control	protein	YabA
APG6_N	PF17675.1	gi|84489409|ref|YP_447641.1|	-	0.27	11.8	12.5	1.6	9.2	3.2	2.1	2	0	0	2	2	2	0	Apg6	coiled-coil	region
Snapin_Pallidin	PF14712.6	gi|84489409|ref|YP_447641.1|	-	0.28	11.6	14.0	0.21	12.0	5.2	2.1	2	0	0	2	2	2	0	Snapin/Pallidin
DUF3450	PF11932.8	gi|84489409|ref|YP_447641.1|	-	0.29	10.4	13.5	1.8	7.8	6.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Laminin_II	PF06009.12	gi|84489409|ref|YP_447641.1|	-	0.29	11.1	9.0	2.4	8.2	2.4	2.1	2	0	0	2	2	2	0	Laminin	Domain	II
Spc7	PF08317.11	gi|84489409|ref|YP_447641.1|	-	0.3	9.9	14.8	0.72	8.7	4.7	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
COG2	PF06148.11	gi|84489409|ref|YP_447641.1|	-	0.31	11.1	7.7	2.8	8.1	0.8	2.1	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Goodbye	PF17109.5	gi|84489409|ref|YP_447641.1|	-	0.33	11.4	5.2	1.3	9.5	0.7	2.1	2	0	0	2	2	2	0	fungal	STAND	N-terminal	Goodbye	domain
PI_PP_I	PF18363.1	gi|84489409|ref|YP_447641.1|	-	0.36	11.0	2.7	0.46	10.7	0.6	1.9	2	0	0	2	2	2	0	Phosphoinositide	phosphatase	insertion	domain
DASH_Dad4	PF08650.10	gi|84489409|ref|YP_447641.1|	-	0.38	10.7	4.3	3.2	7.8	1.8	2.8	2	1	0	2	2	2	0	DASH	complex	subunit	Dad4
CREPT	PF16566.5	gi|84489409|ref|YP_447641.1|	-	0.4	10.8	9.8	0.39	10.9	2.2	2.1	2	0	0	2	2	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
DUF4446	PF14584.6	gi|84489409|ref|YP_447641.1|	-	0.45	10.5	5.9	2.3	8.2	1.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
Cob_adeno_trans	PF01923.18	gi|84489409|ref|YP_447641.1|	-	0.49	10.5	3.9	8	6.6	3.9	2.0	1	1	0	1	1	1	0	Cobalamin	adenosyltransferase
Tropomyosin_1	PF12718.7	gi|84489409|ref|YP_447641.1|	-	0.5	10.5	13.3	0.58	10.3	4.0	2.2	2	0	0	2	2	2	0	Tropomyosin	like
TipAS	PF07739.13	gi|84489409|ref|YP_447641.1|	-	0.52	10.9	3.1	4.4	7.9	0.2	2.1	2	0	0	2	2	2	0	TipAS	antibiotic-recognition	domain
Casc1_N	PF15927.5	gi|84489409|ref|YP_447641.1|	-	0.57	9.8	11.0	1.7	8.3	3.2	2.0	2	0	0	2	2	2	0	Cancer	susceptibility	candidate	1	N-terminus
FemAB	PF02388.16	gi|84489409|ref|YP_447641.1|	-	0.59	8.9	8.6	0.096	11.5	0.8	2.0	1	1	1	2	2	2	0	FemAB	family
Glutaredoxin2_C	PF04399.13	gi|84489409|ref|YP_447641.1|	-	0.65	9.8	3.1	4.3	7.2	0.2	2.1	2	0	0	2	2	2	0	Glutaredoxin	2,	C	terminal	domain
TMF_TATA_bd	PF12325.8	gi|84489409|ref|YP_447641.1|	-	0.65	10.2	13.1	0.077	13.2	2.2	2.1	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Flagellar_rod	PF05149.12	gi|84489409|ref|YP_447641.1|	-	0.7	9.3	11.9	1.1	8.7	1.0	2.0	2	0	0	2	2	2	0	Paraflagellar	rod	protein
Sec34	PF04136.15	gi|84489409|ref|YP_447641.1|	-	0.76	9.6	8.0	1.5	8.7	2.0	2.1	2	0	0	2	2	2	0	Sec34-like	family
IFT57	PF10498.9	gi|84489409|ref|YP_447641.1|	-	0.79	8.6	11.2	0.72	8.8	4.1	2.1	2	0	0	2	2	2	0	Intra-flagellar	transport	protein	57
GAS	PF13851.6	gi|84489409|ref|YP_447641.1|	-	0.81	9.0	15.0	0.19	11.1	3.2	2.0	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
HIP1_clath_bdg	PF16515.5	gi|84489409|ref|YP_447641.1|	-	0.82	10.3	15.1	1.9	9.1	3.3	2.1	2	0	0	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
SKA1	PF07160.12	gi|84489409|ref|YP_447641.1|	-	0.82	9.5	11.1	2.2	8.1	1.1	2.0	2	0	0	2	2	2	0	Spindle	and	kinetochore-associated	protein	1
Hrs_helical	PF12210.8	gi|84489409|ref|YP_447641.1|	-	0.87	10.2	7.5	0.17	12.4	1.6	2.2	2	1	0	2	2	2	0	Hepatocyte	growth	factor-regulated	tyrosine	kinase	substrate
DUF641	PF04859.12	gi|84489409|ref|YP_447641.1|	-	0.92	9.8	9.1	5.5	7.3	2.1	2.1	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
Csm1_N	PF18504.1	gi|84489409|ref|YP_447641.1|	-	0.93	9.9	13.5	0.73	10.2	3.2	2.4	2	0	0	2	2	2	0	Csm1	N-terminal	domain
ATG16	PF08614.11	gi|84489409|ref|YP_447641.1|	-	1.1	9.5	13.8	2.9	8.1	2.6	2.0	1	1	0	2	2	2	0	Autophagy	protein	16	(ATG16)
CC2-LZ	PF16516.5	gi|84489409|ref|YP_447641.1|	-	1.1	9.7	9.4	2.7	8.4	1.5	2.4	2	0	0	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
DASH_Dad2	PF08654.10	gi|84489409|ref|YP_447641.1|	-	1.2	9.6	7.8	0.64	10.5	2.0	2.3	2	1	0	2	2	2	0	DASH	complex	subunit	Dad2
AAA_13	PF13166.6	gi|84489409|ref|YP_447641.1|	-	1.2	7.7	10.9	7.2	5.1	10.9	1.9	1	1	0	1	1	1	0	AAA	domain
FliE	PF02049.18	gi|84489409|ref|YP_447641.1|	-	1.2	9.3	8.7	1.8	8.8	2.9	2.2	2	0	0	2	2	2	0	Flagellar	hook-basal	body	complex	protein	FliE
Matrilin_ccoil	PF10393.9	gi|84489409|ref|YP_447641.1|	-	1.2	9.0	7.0	6.3	6.8	0.2	2.9	2	1	1	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
PRP1_N	PF06424.12	gi|84489409|ref|YP_447641.1|	-	1.3	9.4	6.4	0.96	9.8	0.9	2.1	2	0	0	2	2	2	0	PRP1	splicing	factor,	N-terminal
Med10	PF09748.9	gi|84489409|ref|YP_447641.1|	-	1.3	9.0	6.5	13	5.8	6.5	2.1	1	1	0	1	1	1	0	Transcription	factor	subunit	Med10	of	Mediator	complex
BLOC1_2	PF10046.9	gi|84489409|ref|YP_447641.1|	-	1.5	9.2	9.8	0.81	10.0	3.3	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Myc-LZ	PF02344.15	gi|84489409|ref|YP_447641.1|	-	1.5	9.0	5.8	23	5.2	0.1	2.9	2	1	0	2	2	2	0	Myc	leucine	zipper	domain
TMF_DNA_bd	PF12329.8	gi|84489409|ref|YP_447641.1|	-	1.5	8.9	13.6	0.43	10.6	1.2	3.1	2	1	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Retrotrans_gag	PF03732.17	gi|84489409|ref|YP_447641.1|	-	1.5	9.1	4.9	0.66	10.3	0.6	2.0	2	0	0	2	2	2	0	Retrotransposon	gag	protein
TolA_bind_tri	PF16331.5	gi|84489409|ref|YP_447641.1|	-	1.6	8.9	13.8	0.55	10.3	5.7	2.2	2	0	0	2	2	2	0	TolA	binding	protein	trimerisation
FAP206	PF12018.8	gi|84489409|ref|YP_447641.1|	-	1.7	8.1	8.3	1.2	8.6	0.9	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function
Phage_GP20	PF06810.11	gi|84489409|ref|YP_447641.1|	-	2.2	8.1	13.0	1.7	8.4	5.4	2.1	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
Rho_Binding	PF08912.11	gi|84489409|ref|YP_447641.1|	-	2.6	8.9	13.7	6	7.8	2.6	2.5	2	0	0	2	2	2	0	Rho	Binding
TMPIT	PF07851.13	gi|84489409|ref|YP_447641.1|	-	3	7.0	8.4	2	7.6	1.3	2.0	2	0	0	2	2	2	0	TMPIT-like	protein
DUF4200	PF13863.6	gi|84489409|ref|YP_447641.1|	-	3.2	8.2	17.3	1.7	9.1	3.8	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
RmuC	PF02646.16	gi|84489409|ref|YP_447641.1|	-	3.7	6.6	12.7	2.7	7.0	2.7	2.1	2	0	0	2	2	2	0	RmuC	family
USP8_interact	PF08941.10	gi|84489409|ref|YP_447641.1|	-	3.8	7.3	6.5	1.4	8.7	0.7	2.0	2	0	0	2	2	2	0	USP8	interacting
BST2	PF16716.5	gi|84489409|ref|YP_447641.1|	-	3.8	8.2	14.3	3.6	8.2	4.5	2.3	2	0	0	2	2	2	0	Bone	marrow	stromal	antigen	2
EMP24_GP25L	PF01105.24	gi|84489409|ref|YP_447641.1|	-	4.2	7.3	6.9	6.1	6.7	1.6	2.2	2	0	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
DUF5320	PF17253.2	gi|84489409|ref|YP_447641.1|	-	4.4	8.4	5.3	48	5.1	0.1	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
DUF16	PF01519.16	gi|84489409|ref|YP_447641.1|	-	5.2	7.6	12.3	7.7	7.1	4.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF16
Cluap1	PF10234.9	gi|84489409|ref|YP_447641.1|	-	5.4	6.3	12.5	1.7	7.9	2.7	2.0	2	0	0	2	2	2	0	Clusterin-associated	protein-1
CRR7	PF12095.8	gi|84489409|ref|YP_447641.1|	-	5.7	7.5	8.3	2.3	8.7	1.2	2.2	2	0	0	2	2	2	0	Protein	CHLORORESPIRATORY	REDUCTION	7
Fungal_TACC	PF12709.7	gi|84489409|ref|YP_447641.1|	-	6.5	7.3	10.7	1.2	9.7	1.2	2.5	2	1	0	2	2	2	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
ABC_tran_CTD	PF16326.5	gi|84489409|ref|YP_447641.1|	-	7.8	6.8	15.1	0.51	10.6	3.5	2.5	2	0	0	2	2	2	0	ABC	transporter	C-terminal	domain
SlyX	PF04102.12	gi|84489409|ref|YP_447641.1|	-	8.2	7.1	14.0	3.2	8.4	5.4	2.3	2	0	0	2	2	2	0	SlyX
Med9	PF07544.13	gi|84489409|ref|YP_447641.1|	-	8.7	6.5	13.2	6.7	6.9	3.2	2.5	2	1	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
FliD_N	PF02465.18	gi|84489409|ref|YP_447641.1|	-	9.1	7.1	11.1	3.4	8.4	2.8	2.1	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
Cauli_AT	PF03233.13	gi|84489409|ref|YP_447641.1|	-	9.3	6.2	9.6	12	5.8	2.2	2.1	2	0	0	2	2	2	0	Aphid	transmission	protein
ZapB	PF06005.12	gi|84489409|ref|YP_447641.1|	-	9.6	6.7	16.3	1.4	9.4	5.3	2.3	2	0	0	2	2	2	0	Cell	division	protein	ZapB
SRP54	PF00448.22	gi|84489410|ref|YP_447642.1|	-	1.4e-75	253.2	0.6	2.2e-75	252.6	0.6	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|84489410|ref|YP_447642.1|	-	1.1e-11	44.8	1.9	1.1e-11	44.8	1.9	2.6	2	0	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
AAA_17	PF13207.6	gi|84489410|ref|YP_447642.1|	-	6.2e-08	33.2	0.1	6.2e-08	33.2	0.1	3.2	3	1	0	4	4	3	1	AAA	domain
AAA_30	PF13604.6	gi|84489410|ref|YP_447642.1|	-	1.7e-06	27.9	0.1	3.2e-06	27.0	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.14	gi|84489410|ref|YP_447642.1|	-	0.00037	20.4	2.6	0.18	11.7	0.1	2.6	1	1	1	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.15	gi|84489410|ref|YP_447642.1|	-	0.0014	18.5	2.8	0.34	10.8	0.2	3.3	3	0	0	3	3	3	1	NTPase
MMR_HSR1	PF01926.23	gi|84489410|ref|YP_447642.1|	-	0.0031	17.6	1.0	0.015	15.4	1.0	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA	PF00004.29	gi|84489410|ref|YP_447642.1|	-	0.0031	17.9	0.2	0.0075	16.7	0.2	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|84489410|ref|YP_447642.1|	-	0.0033	17.7	0.0	0.0082	16.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|84489410|ref|YP_447642.1|	-	0.004	16.8	0.1	0.017	14.8	0.1	2.3	1	1	0	1	1	1	1	Thymidylate	kinase
CbiA	PF01656.23	gi|84489410|ref|YP_447642.1|	-	0.0056	16.7	4.4	0.069	13.2	0.1	2.9	3	0	0	3	3	3	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_33	PF13671.6	gi|84489410|ref|YP_447642.1|	-	0.006	16.7	0.0	0.018	15.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|84489410|ref|YP_447642.1|	-	0.01	14.8	0.7	0.055	12.5	0.7	2.0	1	1	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_16	PF13191.6	gi|84489410|ref|YP_447642.1|	-	0.012	16.0	0.0	0.037	14.4	0.0	1.8	2	0	0	2	2	1	0	AAA	ATPase	domain
AAA_7	PF12775.7	gi|84489410|ref|YP_447642.1|	-	0.019	14.5	0.1	0.039	13.5	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
TPP_enzyme_N	PF02776.18	gi|84489410|ref|YP_447642.1|	-	0.029	14.0	0.0	0.047	13.3	0.0	1.3	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
ResIII	PF04851.15	gi|84489410|ref|YP_447642.1|	-	0.041	13.9	0.5	0.041	13.9	0.5	4.3	1	1	1	3	3	2	0	Type	III	restriction	enzyme,	res	subunit
Roc	PF08477.13	gi|84489410|ref|YP_447642.1|	-	0.047	13.9	0.7	0.2	11.9	0.2	2.4	2	1	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
APS_kinase	PF01583.20	gi|84489410|ref|YP_447642.1|	-	0.077	12.9	0.0	0.15	11.9	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
ABC_tran	PF00005.27	gi|84489410|ref|YP_447642.1|	-	0.54	10.8	0.0	0.54	10.8	0.0	3.0	2	1	0	2	2	1	0	ABC	transporter
DUF1117	PF06547.12	gi|84489410|ref|YP_447642.1|	-	3.5	8.2	14.4	7.4	7.2	1.8	3.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1117)
Helicase_RecD	PF05127.14	gi|84489410|ref|YP_447642.1|	-	4.1	7.2	4.9	0.6	9.9	0.1	2.0	3	0	0	3	3	3	0	Helicase
Methyltransf_25	PF13649.6	gi|84489411|ref|YP_447643.1|	-	3.9e-21	75.6	0.0	8.8e-21	74.4	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|84489411|ref|YP_447643.1|	-	1.5e-18	67.4	0.1	5.1e-18	65.6	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|84489411|ref|YP_447643.1|	-	1.3e-17	64.0	0.3	1.9e-17	63.4	0.3	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|84489411|ref|YP_447643.1|	-	1e-15	58.1	0.0	1.9e-15	57.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|84489411|ref|YP_447643.1|	-	1.3e-11	44.7	0.0	1.8e-11	44.1	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|84489411|ref|YP_447643.1|	-	2e-11	43.7	0.0	3.9e-11	42.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_2	PF00891.18	gi|84489411|ref|YP_447643.1|	-	6.3e-11	42.0	0.0	8.1e-11	41.6	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|84489411|ref|YP_447643.1|	-	8.8e-11	41.6	0.3	1.4e-10	41.0	0.3	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
RrnaAD	PF00398.20	gi|84489411|ref|YP_447643.1|	-	5e-08	32.3	0.1	6.3e-08	32.0	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.20	gi|84489411|ref|YP_447643.1|	-	7.3e-08	32.0	0.1	1.2e-07	31.3	0.1	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
NodS	PF05401.11	gi|84489411|ref|YP_447643.1|	-	1.3e-06	28.2	0.0	1.7e-06	27.8	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_PK	PF05891.12	gi|84489411|ref|YP_447643.1|	-	4.3e-05	23.1	0.0	5.4e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
Methyltransf_32	PF13679.6	gi|84489411|ref|YP_447643.1|	-	0.00012	22.1	0.0	0.00045	20.2	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_5	PF01795.19	gi|84489411|ref|YP_447643.1|	-	0.00012	21.7	0.0	0.00019	21.1	0.0	1.2	1	0	0	1	1	1	1	MraW	methylase	family
DREV	PF05219.12	gi|84489411|ref|YP_447643.1|	-	0.0002	20.6	0.0	0.00028	20.1	0.0	1.3	1	0	0	1	1	1	1	DREV	methyltransferase
PCMT	PF01135.19	gi|84489411|ref|YP_447643.1|	-	0.00061	19.6	0.0	0.00091	19.0	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
FtsJ	PF01728.19	gi|84489411|ref|YP_447643.1|	-	0.0011	19.2	0.0	0.0012	19.0	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.7	gi|84489411|ref|YP_447643.1|	-	0.0027	17.7	0.0	0.0052	16.7	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_33	PF10017.9	gi|84489411|ref|YP_447643.1|	-	0.01	15.0	0.0	0.013	14.6	0.0	1.1	1	0	0	1	1	1	0	Histidine-specific	methyltransferase,	SAM-dependent
UPF0020	PF01170.18	gi|84489411|ref|YP_447643.1|	-	0.022	14.4	0.1	0.039	13.7	0.1	1.5	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_8	PF05148.15	gi|84489411|ref|YP_447643.1|	-	0.049	13.5	0.0	0.12	12.2	0.0	1.7	1	1	0	1	1	1	0	Hypothetical	methyltransferase
TrkA_N	PF02254.18	gi|84489411|ref|YP_447643.1|	-	0.057	13.7	0.0	0.16	12.3	0.0	1.7	2	0	0	2	2	1	0	TrkA-N	domain
Methyltransf_4	PF02390.17	gi|84489411|ref|YP_447643.1|	-	0.07	12.6	0.1	0.21	11.1	0.0	1.8	2	0	0	2	2	2	0	Putative	methyltransferase
DRE2_N	PF16803.5	gi|84489411|ref|YP_447643.1|	-	0.1	12.8	0.1	0.21	11.9	0.1	1.6	1	0	0	1	1	1	0	Fe-S	cluster	assembly	protein	DRE2	N-terminus
DUF368	PF04018.13	gi|84489412|ref|YP_447644.1|	-	1.7e-70	237.4	21.9	1.7e-70	237.4	21.9	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF368)
dUTPase	PF00692.19	gi|84489413|ref|YP_447645.1|	-	1.1e-12	47.8	0.0	1.6e-12	47.2	0.0	1.2	1	0	0	1	1	1	1	dUTPase
Herpes_ORF11	PF04797.13	gi|84489413|ref|YP_447645.1|	-	0.058	12.2	0.0	0.077	11.8	0.0	1.1	1	0	0	1	1	1	0	Herpesvirus	dUTPase	protein
TPP_enzyme_N	PF02776.18	gi|84489414|ref|YP_447646.1|	-	1.7e-49	167.8	0.0	1.5e-48	164.6	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|84489414|ref|YP_447646.1|	-	9.5e-32	109.9	0.1	5.4e-30	104.2	0.0	2.9	2	1	1	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|84489414|ref|YP_447646.1|	-	8.4e-30	103.3	0.1	2.2e-29	101.9	0.0	1.8	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
Polysacc_deac_1	PF01522.21	gi|84489414|ref|YP_447646.1|	-	0.009	15.9	0.5	0.25	11.3	0.0	2.8	3	0	0	3	3	3	1	Polysaccharide	deacetylase
CO_dh	PF02552.16	gi|84489414|ref|YP_447646.1|	-	0.023	14.5	0.8	0.046	13.5	0.0	1.9	2	0	0	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
DUF2774	PF11242.8	gi|84489414|ref|YP_447646.1|	-	0.039	14.2	0.0	2.9	8.2	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2774)
XFP_N	PF09364.10	gi|84489414|ref|YP_447646.1|	-	0.093	11.5	0.0	0.18	10.6	0.0	1.4	1	0	0	1	1	1	0	XFP	N-terminal	domain
T4_Rnl2_C	PF18043.1	gi|84489414|ref|YP_447646.1|	-	0.11	12.7	1.9	0.34	11.1	1.9	1.8	1	0	0	1	1	1	0	T4	RNA	ligase	2	C-terminal
Big_3_5	PF16640.5	gi|84489415|ref|YP_447647.1|	-	7.7e-10	38.8	77.0	4.4e-07	30.0	2.7	9.8	9	0	0	9	9	9	4	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|84489415|ref|YP_447647.1|	-	9.7e-08	32.0	19.7	9.7e-08	32.0	19.7	15.3	3	2	12	16	16	16	3	Right	handed	beta	helix	region
Phage_spike	PF18715.1	gi|84489415|ref|YP_447647.1|	-	0.037	14.1	5.5	0.05	13.7	0.7	4.0	2	0	0	2	2	2	0	Phage	spike	trimer
MORN_2	PF07661.13	gi|84489415|ref|YP_447647.1|	-	0.13	12.6	3.5	2.4e+02	2.5	0.1	5.7	5	0	0	5	5	5	0	MORN	repeat	variant
Edc3_linker	PF16598.5	gi|84489415|ref|YP_447647.1|	-	2.7	8.7	8.9	8.6	7.1	0.1	3.2	2	0	0	2	2	2	0	Linker	region	of	enhancer	of	mRNA-decapping	protein	3
DUF4013	PF13197.6	gi|84489416|ref|YP_447648.1|	-	1.6e-19	70.4	24.3	1.6e-19	70.4	24.3	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4013)
HTH_3	PF01381.22	gi|84489417|ref|YP_447649.1|	-	4.9e-14	52.1	0.3	5.7e-14	51.9	0.3	1.1	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|84489417|ref|YP_447649.1|	-	3.4e-08	33.4	0.4	3.6e-08	33.3	0.4	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|84489417|ref|YP_447649.1|	-	2.4e-07	31.0	0.0	2.7e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|84489417|ref|YP_447649.1|	-	7.9e-06	25.6	0.0	1.1e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|84489417|ref|YP_447649.1|	-	0.00025	21.4	0.1	0.00037	20.9	0.1	1.4	1	1	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_24	PF13412.6	gi|84489417|ref|YP_447649.1|	-	0.00044	19.7	0.0	0.00071	19.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_37	PF13744.6	gi|84489417|ref|YP_447649.1|	-	0.00045	20.1	1.1	0.0021	18.0	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|84489417|ref|YP_447649.1|	-	0.00062	19.8	0.2	0.0064	16.5	0.1	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
CENP-B_N	PF04218.13	gi|84489417|ref|YP_447649.1|	-	0.0042	16.7	0.3	0.022	14.4	0.0	1.9	2	0	0	2	2	2	1	CENP-B	N-terminal	DNA-binding	domain
HTH_11	PF08279.12	gi|84489417|ref|YP_447649.1|	-	0.0064	16.4	1.0	0.008	16.1	0.1	1.6	2	0	0	2	2	2	1	HTH	domain
MarR	PF01047.22	gi|84489417|ref|YP_447649.1|	-	0.013	15.4	0.0	0.027	14.4	0.0	1.5	1	0	0	1	1	1	0	MarR	family
YdaS_antitoxin	PF15943.5	gi|84489417|ref|YP_447649.1|	-	0.015	15.1	0.0	0.019	14.8	0.0	1.2	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
Sigma70_r4	PF04545.16	gi|84489417|ref|YP_447649.1|	-	0.016	14.7	0.1	0.027	14.0	0.1	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
Phage_CI_repr	PF07022.13	gi|84489417|ref|YP_447649.1|	-	0.024	14.7	0.0	0.025	14.7	0.0	1.2	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
HTH_23	PF13384.6	gi|84489417|ref|YP_447649.1|	-	0.029	14.2	0.0	0.045	13.6	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_Crp_2	PF13545.6	gi|84489417|ref|YP_447649.1|	-	0.033	14.1	0.0	0.063	13.3	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.6	gi|84489417|ref|YP_447649.1|	-	0.055	13.2	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
ABC2_membrane_4	PF12730.7	gi|84489418|ref|YP_447650.1|	-	2e-28	99.6	29.8	2e-28	99.6	29.8	1.8	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|84489418|ref|YP_447650.1|	-	1.9e-06	27.4	26.5	3.8e-05	23.1	24.3	2.6	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|84489418|ref|YP_447650.1|	-	0.44	10.1	42.4	3.1	7.3	42.4	2.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|84489419|ref|YP_447651.1|	-	2.4e-30	105.9	0.2	2.4e-30	105.9	0.2	1.8	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|84489419|ref|YP_447651.1|	-	3.5e-09	36.9	4.9	1.9e-07	31.2	0.0	2.6	2	1	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
MMR_HSR1	PF01926.23	gi|84489419|ref|YP_447651.1|	-	0.0014	18.7	1.4	0.57	10.3	0.1	2.4	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|84489419|ref|YP_447651.1|	-	0.0023	17.9	0.1	0.0023	17.9	0.1	2.4	3	0	0	3	3	3	1	RsgA	GTPase
SMC_N	PF02463.19	gi|84489419|ref|YP_447651.1|	-	0.0053	16.2	1.3	0.32	10.4	0.1	2.4	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|84489419|ref|YP_447651.1|	-	0.027	14.7	0.1	0.066	13.5	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|84489419|ref|YP_447651.1|	-	0.077	12.7	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|84489419|ref|YP_447651.1|	-	0.34	10.5	3.1	0.22	11.1	0.3	2.1	2	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_23	PF13476.6	gi|84489419|ref|YP_447651.1|	-	9.9	6.6	16.8	3.4e+02	1.6	16.8	2.6	1	1	0	1	1	1	0	AAA	domain
Lactamase_B	PF00753.27	gi|84489420|ref|YP_447652.1|	-	8.6e-31	107.5	0.0	2.5e-30	105.9	0.0	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|84489420|ref|YP_447652.1|	-	2.4e-05	24.0	0.0	5.7e-05	22.7	0.0	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|84489420|ref|YP_447652.1|	-	0.00013	21.4	0.1	0.00026	20.5	0.1	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|84489420|ref|YP_447652.1|	-	0.00056	19.8	0.0	0.00075	19.4	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Radical_SAM	PF04055.21	gi|84489421|ref|YP_447653.1|	-	4.5e-14	53.2	0.1	1.1e-13	51.9	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|84489421|ref|YP_447653.1|	-	5.7e-06	26.8	0.2	1.6e-05	25.3	0.2	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|84489421|ref|YP_447653.1|	-	2.5e-05	24.6	0.0	6.7e-05	23.2	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|84489421|ref|YP_447653.1|	-	0.00041	20.5	0.3	0.0014	18.7	0.0	2.1	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
ABC_tran	PF00005.27	gi|84489422|ref|YP_447654.1|	-	5.2e-42	143.6	0.2	2.2e-22	80.0	0.0	2.9	2	1	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|84489422|ref|YP_447654.1|	-	5.4e-12	45.6	9.8	1.5e-05	24.5	3.0	3.7	3	2	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.15	gi|84489422|ref|YP_447654.1|	-	3e-10	39.8	2.3	5.2e-10	39.0	2.3	1.4	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.6	gi|84489422|ref|YP_447654.1|	-	4.6e-08	33.2	10.3	0.03	14.1	2.5	4.4	2	2	2	4	4	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|84489422|ref|YP_447654.1|	-	7.1e-07	29.3	0.0	0.035	14.0	0.1	3.4	3	0	0	3	3	3	1	RsgA	GTPase
AAA	PF00004.29	gi|84489422|ref|YP_447654.1|	-	0.00011	22.6	0.1	0.52	10.7	0.0	3.2	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.22	gi|84489422|ref|YP_447654.1|	-	0.00014	22.2	0.0	1.7	9.1	0.0	3.3	3	0	0	3	3	3	2	RNA	helicase
Rad17	PF03215.15	gi|84489422|ref|YP_447654.1|	-	0.0003	20.8	0.0	0.93	9.4	0.0	2.7	2	1	0	2	2	2	2	Rad17	P-loop	domain
Fer4	PF00037.27	gi|84489422|ref|YP_447654.1|	-	0.00044	20.0	3.0	0.00044	20.0	3.0	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_18	PF13238.6	gi|84489422|ref|YP_447654.1|	-	0.00055	20.5	0.8	0.2	12.2	0.1	3.5	3	1	1	4	4	4	1	AAA	domain
AAA_24	PF13479.6	gi|84489422|ref|YP_447654.1|	-	0.0014	18.4	2.1	0.5	10.1	0.0	3.2	3	1	1	4	4	4	1	AAA	domain
NB-ARC	PF00931.22	gi|84489422|ref|YP_447654.1|	-	0.0021	17.3	0.1	0.5	9.5	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
AAA_29	PF13555.6	gi|84489422|ref|YP_447654.1|	-	0.0027	17.4	0.3	0.16	11.7	0.1	2.9	3	0	0	3	3	3	1	P-loop	containing	region	of	AAA	domain
RuvB_N	PF05496.12	gi|84489422|ref|YP_447654.1|	-	0.0038	17.0	0.8	0.33	10.7	0.0	2.9	3	0	0	3	3	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
SbcCD_C	PF13558.6	gi|84489422|ref|YP_447654.1|	-	0.0046	17.2	0.0	6.3	7.1	0.0	3.0	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_16	PF13191.6	gi|84489422|ref|YP_447654.1|	-	0.0062	16.9	0.0	0.22	11.9	0.0	2.5	2	1	0	2	2	2	1	AAA	ATPase	domain
Fer4_6	PF12837.7	gi|84489422|ref|YP_447654.1|	-	0.0092	16.0	2.2	0.0092	16.0	2.2	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_23	PF13476.6	gi|84489422|ref|YP_447654.1|	-	0.015	15.8	9.7	0.13	12.8	2.8	3.0	2	2	0	2	2	2	0	AAA	domain
Fer4_9	PF13187.6	gi|84489422|ref|YP_447654.1|	-	0.029	14.5	9.0	0.055	13.6	9.0	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489422|ref|YP_447654.1|	-	0.033	14.8	8.9	0.065	13.8	8.9	1.5	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_22	PF13401.6	gi|84489422|ref|YP_447654.1|	-	0.035	14.4	0.8	3.3	8.0	0.1	3.0	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.6	gi|84489422|ref|YP_447654.1|	-	0.053	13.8	0.0	13	6.0	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|84489422|ref|YP_447654.1|	-	0.054	13.4	0.7	23	4.9	0.0	3.3	4	0	0	4	4	3	0	NACHT	domain
Fer4_10	PF13237.6	gi|84489422|ref|YP_447654.1|	-	0.057	13.6	8.5	0.12	12.5	8.5	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
PhoH	PF02562.16	gi|84489422|ref|YP_447654.1|	-	0.098	12.1	0.7	7.7	5.9	0.0	3.3	4	0	0	4	4	4	0	PhoH-like	protein
SRP54	PF00448.22	gi|84489422|ref|YP_447654.1|	-	0.11	12.1	0.4	3	7.4	0.0	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
IstB_IS21	PF01695.17	gi|84489422|ref|YP_447654.1|	-	0.12	12.1	0.0	25	4.6	0.0	2.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_15	PF13175.6	gi|84489422|ref|YP_447654.1|	-	0.13	12.0	8.1	0.71	9.5	2.3	2.7	2	2	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|84489422|ref|YP_447654.1|	-	0.21	11.8	1.8	6.4	6.9	0.1	3.1	3	1	0	3	3	2	0	AAA	domain
Fer4_21	PF14697.6	gi|84489422|ref|YP_447654.1|	-	0.24	11.6	9.3	0.44	10.7	9.3	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
MMR_HSR1	PF01926.23	gi|84489422|ref|YP_447654.1|	-	0.26	11.4	0.9	1	9.5	0.1	2.4	3	0	0	3	3	2	0	50S	ribosome-binding	GTPase
Fer4_16	PF13484.6	gi|84489422|ref|YP_447654.1|	-	0.68	10.9	9.4	17	6.4	9.4	2.6	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|84489422|ref|YP_447654.1|	-	0.72	10.1	10.5	0.095	12.8	2.0	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CBFD_NFYB_HMF	PF00808.23	gi|84489423|ref|YP_447655.1|	-	4.3e-15	55.8	0.1	4.7e-15	55.6	0.1	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
CENP-T_C	PF15511.6	gi|84489423|ref|YP_447655.1|	-	0.00014	21.9	0.0	0.00015	21.9	0.0	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
Histone	PF00125.24	gi|84489423|ref|YP_447655.1|	-	0.00087	19.7	0.1	0.00093	19.6	0.1	1.2	1	1	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|84489423|ref|YP_447655.1|	-	0.0015	18.8	0.0	0.0017	18.7	0.0	1.2	1	0	0	1	1	1	1	CENP-S	protein
TFIID-31kDa	PF02291.15	gi|84489423|ref|YP_447655.1|	-	0.019	15.0	0.0	0.02	15.0	0.0	1.2	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	31kD	subunit
AAA_32	PF13654.6	gi|84489423|ref|YP_447655.1|	-	0.031	13.1	0.3	0.035	12.9	0.3	1.0	1	0	0	1	1	1	0	AAA	domain
PMT_2	PF13231.6	gi|84489424|ref|YP_447656.1|	-	7.2e-35	120.6	17.2	7.2e-35	120.6	17.2	4.0	3	1	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
TctB	PF07331.11	gi|84489424|ref|YP_447656.1|	-	0.011	15.9	4.5	0.011	15.9	4.5	4.4	3	1	1	4	4	4	0	Tripartite	tricarboxylate	transporter	TctB	family
PMT_2	PF13231.6	gi|84489425|ref|YP_447657.1|	-	4e-19	69.4	15.0	4e-19	69.4	15.0	3.4	3	1	0	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF4883	PF16224.5	gi|84489425|ref|YP_447657.1|	-	0.0051	17.0	5.1	0.0051	17.0	5.1	2.4	2	0	0	2	2	2	1	DOmain	of	unknown	function	(DUF4883)
NAD_synthase	PF02540.17	gi|84489426|ref|YP_447658.1|	-	1.9e-05	23.9	0.1	5.5e-05	22.4	0.0	1.9	1	1	1	2	2	2	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|84489426|ref|YP_447658.1|	-	0.00033	19.6	0.2	0.00084	18.2	0.2	1.9	1	1	0	1	1	1	1	tRNA	methyl	transferase
QueC	PF06508.13	gi|84489426|ref|YP_447658.1|	-	0.00044	19.8	0.1	0.0021	17.6	0.0	2.0	1	1	1	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|84489426|ref|YP_447658.1|	-	0.0075	16.0	0.0	0.0098	15.6	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
A2M	PF00207.22	gi|84489426|ref|YP_447658.1|	-	0.025	14.4	0.0	0.057	13.3	0.0	1.5	1	0	0	1	1	1	0	Alpha-2-macroglobulin	family
KH_2	PF07650.17	gi|84489426|ref|YP_447658.1|	-	0.051	13.4	1.3	0.16	11.8	1.3	2.0	1	0	0	1	1	1	0	KH	domain
Tubulin	PF00091.25	gi|84489426|ref|YP_447658.1|	-	0.054	13.7	0.2	0.21	11.8	0.0	1.9	2	0	0	2	2	2	0	Tubulin/FtsZ	family,	GTPase	domain
ATP_bind_3	PF01171.20	gi|84489426|ref|YP_447658.1|	-	0.11	12.3	0.1	0.31	10.8	0.0	1.8	2	0	0	2	2	2	0	PP-loop	family
Lyase_1	PF00206.20	gi|84489427|ref|YP_447659.1|	-	1.5e-60	205.2	0.1	2e-60	204.8	0.1	1.2	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.6	gi|84489427|ref|YP_447659.1|	-	1.3e-17	64.3	0.0	3.9e-17	62.8	0.0	1.9	1	0	0	1	1	1	1	Argininosuccinate	lyase	C-terminal
MCM_N	PF14551.6	gi|84489427|ref|YP_447659.1|	-	0.0045	17.5	0.4	0.02	15.5	0.2	2.1	2	0	0	2	2	2	1	MCM	N-terminal	domain
Peptidase_M24	PF00557.24	gi|84489427|ref|YP_447659.1|	-	0.07	12.8	0.0	2.6	7.7	0.0	2.6	2	0	0	2	2	2	0	Metallopeptidase	family	M24
Big_3_5	PF16640.5	gi|84489428|ref|YP_447660.1|	-	6.3e-17	61.5	20.5	2.2e-10	40.5	5.9	11.4	12	0	0	12	12	12	5	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489428|ref|YP_447660.1|	-	0.0003	20.7	3.2	0.0003	20.7	3.2	11.0	10	1	1	11	11	11	3	Bacterial	Ig-like	domain	(group	1)
DUF824	PF05688.11	gi|84489428|ref|YP_447660.1|	-	6.4	6.7	8.1	1.3	8.9	0.4	3.3	3	0	0	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
Ribosomal_S27	PF01599.19	gi|84489429|ref|YP_447661.1|	-	3.3e-18	65.6	4.7	3.8e-18	65.4	4.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27a
NCD3G	PF07562.14	gi|84489429|ref|YP_447661.1|	-	0.01	15.8	0.3	0.012	15.6	0.3	1.2	1	0	0	1	1	1	0	Nine	Cysteines	Domain	of	family	3	GPCR
RNA_POL_M_15KD	PF02150.16	gi|84489429|ref|YP_447661.1|	-	0.13	12.1	1.6	1.3	8.9	0.2	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Ribosomal_S24e	PF01282.19	gi|84489430|ref|YP_447662.1|	-	5.7e-18	64.6	0.0	7.6e-18	64.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DUF359	PF04019.12	gi|84489431|ref|YP_447663.1|	-	2.3e-36	124.2	0.1	3e-36	123.8	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Spt4	PF06093.13	gi|84489432|ref|YP_447664.1|	-	3.1e-13	49.6	0.1	4.6e-13	49.1	0.1	1.2	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Nop10p	PF04135.12	gi|84489432|ref|YP_447664.1|	-	0.032	14.3	2.3	0.048	13.7	1.6	1.6	2	0	0	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
RecR	PF02132.15	gi|84489432|ref|YP_447664.1|	-	0.042	13.4	5.3	0.074	12.6	5.3	1.3	1	0	0	1	1	1	0	RecR	protein
PolC_DP2	PF03833.13	gi|84489432|ref|YP_447664.1|	-	0.059	11.2	0.5	0.053	11.4	0.5	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
SHS2_Rpb7-N	PF03876.17	gi|84489433|ref|YP_447665.1|	-	2.9e-17	62.8	0.1	5.3e-17	61.9	0.1	1.4	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|84489433|ref|YP_447665.1|	-	1.4e-12	47.7	0.1	2.9e-12	46.8	0.1	1.5	1	0	0	1	1	1	1	S1	RNA	binding	domain
Pyrophosphatase	PF00719.19	gi|84489434|ref|YP_447666.1|	-	1.3e-57	194.1	0.1	1.5e-57	193.9	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
PIN_9	PF18477.1	gi|84489435|ref|YP_447667.1|	-	2e-25	89.4	0.4	2.3e-25	89.2	0.4	1.0	1	0	0	1	1	1	1	PIN	like	domain
PIN_4	PF13638.6	gi|84489435|ref|YP_447667.1|	-	7.9e-06	26.2	1.7	0.0017	18.6	1.7	2.1	1	1	0	1	1	1	1	PIN	domain
PIN	PF01850.21	gi|84489435|ref|YP_447667.1|	-	0.0041	17.6	0.1	0.0049	17.4	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
Fcf1	PF04900.12	gi|84489435|ref|YP_447667.1|	-	0.048	14.1	0.4	0.072	13.5	0.4	1.3	1	1	0	1	1	1	0	Fcf1
DUF188	PF02639.14	gi|84489435|ref|YP_447667.1|	-	0.06	13.0	0.0	0.07	12.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
eIF2_C	PF09173.11	gi|84489436|ref|YP_447668.1|	-	1.5e-33	114.9	0.0	3.5e-33	113.7	0.0	1.7	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU	PF00009.27	gi|84489436|ref|YP_447668.1|	-	3.6e-30	104.9	2.0	3.9e-29	101.6	2.0	2.1	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|84489436|ref|YP_447668.1|	-	5e-09	36.4	0.2	1.3e-08	35.1	0.2	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
RsgA_GTPase	PF03193.16	gi|84489436|ref|YP_447668.1|	-	4.2e-05	23.5	0.5	0.00054	19.9	0.0	2.4	2	0	0	2	2	2	1	RsgA	GTPase
MMR_HSR1	PF01926.23	gi|84489436|ref|YP_447668.1|	-	0.00035	20.6	0.0	0.001	19.1	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.9	gi|84489436|ref|YP_447668.1|	-	0.0026	17.5	0.6	0.37	10.5	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1_Xtn	PF16897.5	gi|84489436|ref|YP_447668.1|	-	0.004	17.1	0.1	0.0078	16.2	0.1	1.4	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
FeoB_N	PF02421.18	gi|84489436|ref|YP_447668.1|	-	0.015	14.9	0.5	2.1	7.9	0.1	2.5	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Nop10p	PF04135.12	gi|84489436|ref|YP_447668.1|	-	0.097	12.7	2.8	0.2	11.7	2.8	1.5	1	0	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF2816	PF10992.8	gi|84489436|ref|YP_447668.1|	-	0.11	12.4	0.7	0.18	11.7	0.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2816)
Opy2	PF09463.10	gi|84489436|ref|YP_447668.1|	-	0.95	9.8	9.5	1.6	9.1	8.6	1.8	2	0	0	2	2	2	0	Opy2	protein
DUF35_N	PF12172.8	gi|84489436|ref|YP_447668.1|	-	3.4	7.6	7.4	1.7	8.6	4.9	1.7	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Ribosomal_S6e	PF01092.19	gi|84489437|ref|YP_447669.1|	-	6.9e-40	135.9	0.9	8e-40	135.7	0.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.27	gi|84489438|ref|YP_447670.1|	-	1.4e-32	112.9	0.6	1.6e-31	109.4	0.1	2.7	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.6	gi|84489438|ref|YP_447670.1|	-	1.7e-25	88.7	0.6	3.8e-25	87.6	0.6	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.8	gi|84489438|ref|YP_447670.1|	-	1.8e-20	73.0	2.1	5.6e-20	71.4	2.1	1.9	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.25	gi|84489438|ref|YP_447670.1|	-	5e-10	39.6	2.5	2.3e-06	27.9	0.1	2.9	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|84489438|ref|YP_447670.1|	-	9.4e-08	32.1	0.0	3e-07	30.5	0.0	2.0	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Roc	PF08477.13	gi|84489438|ref|YP_447670.1|	-	0.0064	16.7	0.0	0.039	14.2	0.0	2.3	2	1	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Dynamin_N	PF00350.23	gi|84489438|ref|YP_447670.1|	-	0.016	15.3	0.1	0.54	10.3	0.0	3.0	2	1	1	3	3	3	0	Dynamin	family
ATP_bind_1	PF03029.17	gi|84489438|ref|YP_447670.1|	-	0.023	14.5	0.0	0.071	12.9	0.0	1.8	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Ras	PF00071.22	gi|84489438|ref|YP_447670.1|	-	0.038	13.6	0.0	0.088	12.4	0.0	1.7	1	1	0	1	1	1	0	Ras	family
PIP49_C	PF12260.8	gi|84489438|ref|YP_447670.1|	-	0.1	12.2	0.0	7.6	6.1	0.1	2.3	2	0	0	2	2	2	0	Protein-kinase	domain	of	FAM69
CARD	PF00619.21	gi|84489438|ref|YP_447670.1|	-	4.7	7.3	5.7	5.5	7.1	1.3	2.9	3	0	0	3	3	3	0	Caspase	recruitment	domain
NDK	PF00334.19	gi|84489439|ref|YP_447671.1|	-	5.5e-57	191.5	0.0	6.2e-57	191.4	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.20	gi|84489440|ref|YP_447672.1|	-	4.1e-20	71.8	1.8	4.3e-20	71.7	1.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.14	gi|84489440|ref|YP_447672.1|	-	1.2e-05	25.1	2.1	1.6e-05	24.7	2.1	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
YHS	PF04945.13	gi|84489440|ref|YP_447672.1|	-	0.014	15.5	0.5	0.02	15.0	0.5	1.1	1	0	0	1	1	1	0	YHS	domain
ICAM_N	PF03921.14	gi|84489440|ref|YP_447672.1|	-	0.027	14.1	0.0	0.032	13.9	0.0	1.2	1	0	0	1	1	1	0	Intercellular	adhesion	molecule	(ICAM),	N-terminal	domain
zf-dskA_traR	PF01258.17	gi|84489440|ref|YP_447672.1|	-	0.046	13.7	1.4	0.046	13.7	1.4	1.6	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zf-FLZ	PF04570.14	gi|84489440|ref|YP_447672.1|	-	0.047	13.2	2.7	0.075	12.5	2.7	1.3	1	1	0	1	1	1	0	zinc-finger	of	the	FCS-type,	C2-C2
DUF2116	PF09889.9	gi|84489440|ref|YP_447672.1|	-	0.064	13.2	0.9	4.5	7.3	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
VATC	PF18716.1	gi|84489440|ref|YP_447672.1|	-	1.6	8.6	6.6	7.1	6.6	6.6	1.8	1	1	0	1	1	1	0	Vms1-associating	treble	clef	domain
Ribosomal_S28e	PF01200.18	gi|84489441|ref|YP_447673.1|	-	3.8e-30	103.7	2.1	4.1e-30	103.6	2.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Ribosomal_L7Ae	PF01248.26	gi|84489442|ref|YP_447674.1|	-	6e-26	90.0	0.2	7.1e-26	89.8	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
DUF1269	PF06897.12	gi|84489442|ref|YP_447674.1|	-	0.098	13.0	0.3	10	6.5	0.1	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1269)
UbiA	PF01040.18	gi|84489443|ref|YP_447675.1|	-	2.4e-43	148.3	10.0	3.3e-43	147.8	10.0	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF1146	PF06612.11	gi|84489443|ref|YP_447675.1|	-	0.1	12.7	0.8	0.1	12.7	0.8	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1146)
CitMHS	PF03600.16	gi|84489443|ref|YP_447675.1|	-	1.1	8.4	17.3	0.039	13.1	11.2	1.6	2	0	0	2	2	2	0	Citrate	transporter
Ceramidase	PF05875.12	gi|84489443|ref|YP_447675.1|	-	2.8	7.3	14.8	1.6	8.0	6.7	2.8	1	1	2	3	3	3	0	Ceramidase
AAA_16	PF13191.6	gi|84489444|ref|YP_447676.1|	-	3.6e-06	27.5	0.0	2.2e-05	24.9	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
Cdc6_C	PF09079.11	gi|84489444|ref|YP_447676.1|	-	7.6e-06	25.8	0.1	0.00049	20.0	0.4	3.2	3	1	0	3	3	3	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|84489444|ref|YP_447676.1|	-	1.3e-05	25.5	0.0	4.9e-05	23.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
TniB	PF05621.11	gi|84489444|ref|YP_447676.1|	-	0.002	17.6	0.0	0.0034	16.8	0.0	1.3	1	0	0	1	1	1	1	Bacterial	TniB	protein
AAA_7	PF12775.7	gi|84489444|ref|YP_447676.1|	-	0.0081	15.7	1.2	0.75	9.3	0.0	3.2	4	0	0	4	4	4	1	P-loop	containing	dynein	motor	region
AAA	PF00004.29	gi|84489444|ref|YP_447676.1|	-	0.012	16.0	0.0	0.036	14.5	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_35	PF14516.6	gi|84489444|ref|YP_447676.1|	-	0.038	12.8	0.1	0.14	10.9	0.0	1.9	3	0	0	3	3	3	0	AAA-like	domain
AAA_14	PF13173.6	gi|84489444|ref|YP_447676.1|	-	0.039	14.0	0.7	0.12	12.4	0.0	2.2	2	2	0	2	2	2	0	AAA	domain
TIP49_C	PF17856.1	gi|84489444|ref|YP_447676.1|	-	0.064	13.4	0.2	0.61	10.3	0.0	2.4	1	1	1	2	2	2	0	TIP49	AAA-lid	domain
AAA_18	PF13238.6	gi|84489444|ref|YP_447676.1|	-	0.085	13.4	0.0	0.22	12.1	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|84489444|ref|YP_447676.1|	-	0.099	12.4	0.2	0.5	10.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|84489444|ref|YP_447676.1|	-	0.13	12.4	0.0	0.43	10.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Archease	PF01951.16	gi|84489446|ref|YP_447678.1|	-	5.8e-35	120.5	1.2	6.4e-35	120.4	1.2	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
Gln-synt_C-ter	PF18318.1	gi|84489446|ref|YP_447678.1|	-	0.014	15.2	1.9	0.022	14.6	0.2	2.0	1	1	1	2	2	2	0	Glutamine	synthetase	C-terminal	domain
FlpD	PF02662.16	gi|84489447|ref|YP_447679.1|	-	3.9e-54	181.9	0.0	4.5e-54	181.7	0.0	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
FrhB_FdhB_C	PF04432.13	gi|84489448|ref|YP_447680.1|	-	3.2e-36	124.5	0.2	3.2e-36	124.5	0.2	2.2	2	1	0	2	2	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|84489448|ref|YP_447680.1|	-	4.5e-17	62.0	0.0	1.3e-16	60.5	0.0	1.9	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_10	PF13237.6	gi|84489448|ref|YP_447680.1|	-	1.5e-06	28.2	15.4	0.00037	20.5	0.2	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489448|ref|YP_447680.1|	-	1.6e-06	28.5	28.8	1.3e-05	25.5	16.2	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489448|ref|YP_447680.1|	-	2.2e-06	28.1	15.0	2.2e-06	28.1	15.0	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489448|ref|YP_447680.1|	-	0.00026	21.1	19.5	0.016	15.3	18.5	3.4	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489448|ref|YP_447680.1|	-	0.00072	19.6	15.6	0.08	13.1	5.6	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489448|ref|YP_447680.1|	-	0.001	19.2	12.2	0.15	12.2	0.2	3.5	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489448|ref|YP_447680.1|	-	0.0034	17.1	19.2	0.009	15.8	3.8	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489448|ref|YP_447680.1|	-	0.015	15.7	1.6	0.015	15.7	1.6	3.5	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489448|ref|YP_447680.1|	-	0.019	15.5	23.2	0.028	15.0	2.8	3.2	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
CdiA_C	PF18451.1	gi|84489448|ref|YP_447680.1|	-	0.029	14.6	0.6	0.11	12.7	0.6	2.0	1	0	0	1	1	1	0	Contact-dependent	growth	inhibition	CdiA	C-terminal	domain
Fer4_22	PF17179.4	gi|84489448|ref|YP_447680.1|	-	0.051	14.4	21.3	0.16	12.8	8.5	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489448|ref|YP_447680.1|	-	0.073	14.0	22.3	0.22	12.5	5.5	3.4	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|84489449|ref|YP_447681.1|	-	2.8e-12	46.4	3.6	6.2e-12	45.3	3.6	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Molybdopterin	PF00384.22	gi|84489449|ref|YP_447681.1|	-	0.0008	18.5	6.8	0.023	13.6	0.5	2.7	1	1	0	2	2	2	2	Molybdopterin	oxidoreductase
DUF1694	PF07997.11	gi|84489449|ref|YP_447681.1|	-	6.6	6.8	13.3	0.29	11.2	1.5	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1694)
Sigma_reg_C	PF13791.6	gi|84489449|ref|YP_447681.1|	-	9.9	6.4	8.9	11	6.2	0.7	3.1	3	0	0	3	3	3	0	Sigma	factor	regulator	C-terminal
RtcB	PF01139.17	gi|84489450|ref|YP_447682.1|	-	1.5e-168	561.2	0.0	1.8e-168	561.0	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
PNP_UDP_1	PF01048.20	gi|84489451|ref|YP_447683.1|	-	2.8e-36	124.9	0.0	3.2e-36	124.8	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF2574	PF10836.8	gi|84489451|ref|YP_447683.1|	-	0.028	14.3	0.0	0.05	13.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2574)
Nitro_FeMo-Co	PF02579.17	gi|84489451|ref|YP_447683.1|	-	0.12	12.7	0.0	0.31	11.4	0.0	1.7	1	0	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
FAM25	PF15825.5	gi|84489451|ref|YP_447683.1|	-	0.14	12.5	0.5	0.31	11.4	0.5	1.5	1	0	0	1	1	1	0	FAM25	family
NadA	PF02445.16	gi|84489452|ref|YP_447684.1|	-	2.5e-113	378.2	2.4	2.9e-113	378.0	2.4	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
NAD_binding_1	PF00175.21	gi|84489452|ref|YP_447684.1|	-	0.035	14.8	0.0	7.9	7.2	0.0	2.5	2	0	0	2	2	2	0	Oxidoreductase	NAD-binding	domain
Asparaginase	PF00710.20	gi|84489452|ref|YP_447684.1|	-	0.15	11.6	0.0	0.29	10.7	0.0	1.5	1	0	0	1	1	1	0	Asparaginase,	N-terminal
Cnn_1N	PF07989.11	gi|84489452|ref|YP_447684.1|	-	0.44	10.7	2.6	0.46	10.7	0.1	2.3	2	0	0	2	2	2	0	Centrosomin	N-terminal	motif	1
CIA30	PF08547.12	gi|84489453|ref|YP_447685.1|	-	0.0027	17.7	0.0	0.0043	17.1	0.0	1.2	1	0	0	1	1	1	1	Complex	I	intermediate-associated	protein	30	(CIA30)
MscS_TM	PF12794.7	gi|84489453|ref|YP_447685.1|	-	0.67	8.7	7.3	0.03	13.2	0.8	1.9	2	0	0	2	2	2	0	Mechanosensitive	ion	channel	inner	membrane	domain	1
Glyco_trans_1_3	PF13528.6	gi|84489454|ref|YP_447686.1|	-	2.2e-96	322.9	0.1	2.9e-96	322.5	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	1
Glycos_transf_2	PF00535.26	gi|84489454|ref|YP_447686.1|	-	1.2e-25	90.2	0.0	3.5e-25	88.8	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489454|ref|YP_447686.1|	-	5.7e-08	32.9	0.0	1.2e-07	31.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489454|ref|YP_447686.1|	-	3e-07	30.2	2.5	2e-05	24.2	0.4	3.2	2	1	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tran_28_C	PF04101.16	gi|84489454|ref|YP_447686.1|	-	4e-07	30.2	0.0	9.1e-07	29.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_tranf_2_4	PF13704.6	gi|84489454|ref|YP_447686.1|	-	0.0028	18.1	0.1	0.057	13.9	0.0	2.9	2	1	0	2	2	2	1	Glycosyl	transferase	family	2
Radical_SAM	PF04055.21	gi|84489455|ref|YP_447687.1|	-	4.1e-11	43.5	0.1	6.3e-11	42.9	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Blo-t-5	PF11642.8	gi|84489455|ref|YP_447687.1|	-	0.0084	16.1	0.4	0.02	14.9	0.4	1.5	1	0	0	1	1	1	1	Mite	allergen	Blo	t	5
DUF1848	PF08902.11	gi|84489455|ref|YP_447687.1|	-	9	5.9	15.4	2.1	8.0	3.8	2.9	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
Shikimate_dh_N	PF08501.11	gi|84489456|ref|YP_447688.1|	-	1.5e-32	111.7	0.6	3.8e-32	110.4	0.4	1.8	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.20	gi|84489456|ref|YP_447688.1|	-	2.9e-13	50.1	0.3	5.1e-13	49.3	0.3	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
SDH_C	PF18317.1	gi|84489456|ref|YP_447688.1|	-	4e-08	32.9	0.0	7.6e-08	32.0	0.0	1.4	1	0	0	1	1	1	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Sacchrp_dh_NADP	PF03435.18	gi|84489456|ref|YP_447688.1|	-	8.8e-07	29.2	0.2	1.6e-06	28.4	0.2	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
OCD_Mu_crystall	PF02423.15	gi|84489456|ref|YP_447688.1|	-	4.8e-05	22.5	0.0	7e-05	21.9	0.0	1.2	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
F420_oxidored	PF03807.17	gi|84489456|ref|YP_447688.1|	-	0.0017	18.9	0.1	0.004	17.7	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.6	gi|84489456|ref|YP_447688.1|	-	0.023	15.1	0.0	0.039	14.4	0.0	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
GARS_N	PF02844.15	gi|84489456|ref|YP_447688.1|	-	0.027	15.2	0.1	0.061	14.1	0.1	1.6	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
adh_short	PF00106.25	gi|84489456|ref|YP_447688.1|	-	0.029	13.8	0.0	0.25	10.8	0.0	2.1	2	0	0	2	2	2	0	short	chain	dehydrogenase
PilN	PF05137.13	gi|84489456|ref|YP_447688.1|	-	0.11	12.6	0.2	0.31	11.2	0.1	1.8	2	0	0	2	2	2	0	Fimbrial	assembly	protein	(PilN)
PglD_N	PF17836.1	gi|84489456|ref|YP_447688.1|	-	0.43	11.2	5.1	0.28	11.8	1.4	2.5	2	1	0	2	2	2	0	PglD	N-terminal	domain
tRNA-synt_His	PF13393.6	gi|84489457|ref|YP_447689.1|	-	8.5e-65	219.0	0.0	1e-64	218.8	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|84489457|ref|YP_447689.1|	-	2.7e-16	59.5	0.9	5.8e-16	58.4	0.9	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|84489457|ref|YP_447689.1|	-	7.3e-15	55.4	0.0	8.1e-14	52.0	0.0	2.4	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2	PF00152.20	gi|84489457|ref|YP_447689.1|	-	8e-09	35.0	0.2	4.6e-07	29.2	0.1	2.4	2	1	0	2	2	2	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|84489457|ref|YP_447689.1|	-	0.00091	18.8	0.0	0.0028	17.2	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|84489457|ref|YP_447689.1|	-	0.05	13.0	0.0	0.16	11.4	0.0	1.8	2	1	0	2	2	2	0	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
PRA-CH	PF01502.18	gi|84489458|ref|YP_447690.1|	-	5.9e-33	112.5	0.5	7.6e-33	112.2	0.5	1.1	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
T2SSE	PF00437.20	gi|84489459|ref|YP_447691.1|	-	1.9e-09	37.0	0.0	3.8e-09	36.0	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.29	gi|84489459|ref|YP_447691.1|	-	1.5e-06	27.9	0.1	4.9e-06	26.3	0.1	1.9	1	0	0	1	1	1	1	KH	domain
PIN	PF01850.21	gi|84489459|ref|YP_447691.1|	-	8.5e-06	26.3	0.0	2.5e-05	24.7	0.0	1.9	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.6	gi|84489459|ref|YP_447691.1|	-	0.00021	21.6	0.0	0.00064	20.0	0.0	1.9	1	0	0	1	1	1	1	PIN	domain
AAA_18	PF13238.6	gi|84489459|ref|YP_447691.1|	-	0.00034	21.2	0.0	0.0014	19.2	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
KH_2	PF07650.17	gi|84489459|ref|YP_447691.1|	-	0.00058	19.6	1.3	0.0026	17.6	1.3	2.2	1	0	0	1	1	1	1	KH	domain
KH_4	PF13083.6	gi|84489459|ref|YP_447691.1|	-	0.0032	17.3	0.5	0.018	14.9	0.1	2.4	2	0	0	2	2	2	1	KH	domain
AAA_5	PF07728.14	gi|84489459|ref|YP_447691.1|	-	0.0033	17.4	0.0	0.018	15.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.12	gi|84489459|ref|YP_447691.1|	-	0.005	16.1	0.0	0.011	15.0	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
AAA_14	PF13173.6	gi|84489459|ref|YP_447691.1|	-	0.006	16.6	0.1	0.028	14.5	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
AAA_33	PF13671.6	gi|84489459|ref|YP_447691.1|	-	0.0093	16.1	0.0	0.051	13.7	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|84489459|ref|YP_447691.1|	-	0.012	15.3	0.1	0.034	13.9	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|84489459|ref|YP_447691.1|	-	0.013	16.0	0.0	0.06	13.9	0.0	2.1	2	1	0	2	2	1	0	ABC	transporter
AAA_16	PF13191.6	gi|84489459|ref|YP_447691.1|	-	0.015	15.7	0.0	0.031	14.6	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_29	PF13555.6	gi|84489459|ref|YP_447691.1|	-	0.027	14.2	0.1	0.084	12.6	0.0	1.8	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.6	gi|84489459|ref|YP_447691.1|	-	0.032	14.7	0.4	0.32	11.4	0.0	2.9	3	1	0	3	3	3	0	AAA	domain
AAA_28	PF13521.6	gi|84489459|ref|YP_447691.1|	-	0.034	14.4	0.0	0.079	13.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|84489459|ref|YP_447691.1|	-	0.055	13.2	0.0	0.26	11.0	0.0	2.2	1	1	1	2	2	2	0	Thymidylate	kinase
AAA_30	PF13604.6	gi|84489459|ref|YP_447691.1|	-	0.059	13.1	0.0	1.4	8.6	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
Rad17	PF03215.15	gi|84489459|ref|YP_447691.1|	-	0.068	13.1	0.0	0.15	11.9	0.0	1.6	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA	PF00004.29	gi|84489459|ref|YP_447691.1|	-	0.073	13.5	0.0	0.18	12.2	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.22	gi|84489459|ref|YP_447691.1|	-	0.075	13.4	0.1	0.35	11.3	0.0	2.2	2	0	0	2	2	2	0	RNA	helicase
MeaB	PF03308.16	gi|84489459|ref|YP_447691.1|	-	0.075	12.0	0.0	0.16	10.9	0.0	1.5	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TsaE	PF02367.17	gi|84489459|ref|YP_447691.1|	-	0.091	12.8	0.0	0.26	11.3	0.0	1.7	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
IstB_IS21	PF01695.17	gi|84489459|ref|YP_447691.1|	-	0.094	12.4	0.0	0.21	11.3	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.6	gi|84489459|ref|YP_447691.1|	-	0.13	11.8	0.0	0.34	10.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.18	gi|84489459|ref|YP_447691.1|	-	0.18	11.5	0.0	1.1	9.0	0.0	2.1	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Sigma54_activ_2	PF14532.6	gi|84489459|ref|YP_447691.1|	-	0.2	11.8	0.0	0.44	10.7	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AP_endonuc_2	PF01261.24	gi|84489460|ref|YP_447692.1|	-	1.7e-16	60.3	0.2	2.3e-16	59.9	0.2	1.2	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
tRNA_int_endo	PF01974.17	gi|84489461|ref|YP_447693.1|	-	9.4e-30	102.5	1.6	1.2e-29	102.2	0.8	1.6	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|84489461|ref|YP_447693.1|	-	8.7e-20	70.2	0.4	8.7e-20	70.2	0.4	1.6	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA-synt_1b	PF00579.25	gi|84489462|ref|YP_447694.1|	-	2.5e-52	178.0	0.0	3.2e-52	177.7	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
NAPRTase_C	PF17956.1	gi|84489463|ref|YP_447695.1|	-	0.031	14.7	0.5	2.2	8.7	0.0	3.0	2	1	1	3	3	3	0	Nicotinate	phosphoribosyltransferase	C-terminal	domain
CbiM	PF01891.16	gi|84489464|ref|YP_447696.1|	-	1.6e-57	194.7	19.1	1.8e-57	194.5	19.1	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
PDGLE	PF13190.6	gi|84489465|ref|YP_447697.1|	-	3.5e-13	49.2	0.4	9.8e-13	47.8	0.4	1.7	1	1	0	1	1	1	1	PDGLE	domain
DUF441	PF04284.13	gi|84489465|ref|YP_447697.1|	-	0.0014	18.7	0.0	0.0019	18.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF441)
Porin_O_P	PF07396.11	gi|84489465|ref|YP_447697.1|	-	0.028	13.6	0.0	0.03	13.5	0.0	1.0	1	0	0	1	1	1	0	Phosphate-selective	porin	O	and	P
OppC_N	PF12911.7	gi|84489465|ref|YP_447697.1|	-	0.18	11.8	0.1	0.18	11.8	0.1	2.1	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF4231	PF14015.6	gi|84489465|ref|YP_447697.1|	-	0.19	12.2	0.3	0.55	10.7	0.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
CbiQ	PF02361.16	gi|84489466|ref|YP_447698.1|	-	3.1e-44	151.2	13.0	3.1e-44	151.2	13.0	1.5	2	0	0	2	2	2	1	Cobalt	transport	protein
Ni_hydr_CYTB	PF01292.20	gi|84489466|ref|YP_447698.1|	-	0.11	12.1	4.7	0.46	10.0	4.7	2.3	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
PMBR	PF09373.10	gi|84489467|ref|YP_447699.1|	-	6.9e-06	26.0	0.6	0.067	13.4	0.0	3.5	3	0	0	3	3	3	2	Pseudomurein-binding	repeat
Invasin_D3	PF09134.10	gi|84489467|ref|YP_447699.1|	-	0.11	12.8	0.0	0.23	11.8	0.0	1.6	1	0	0	1	1	1	0	Invasin,	domain	3
DUF2529	PF10740.9	gi|84489468|ref|YP_447700.1|	-	0.016	14.9	0.0	0.019	14.6	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2529)
UFD1	PF03152.14	gi|84489468|ref|YP_447700.1|	-	0.016	14.7	1.2	0.018	14.6	1.2	1.1	1	0	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
MMR_HSR1_Xtn	PF16897.5	gi|84489469|ref|YP_447701.1|	-	4.5e-34	116.7	0.6	4.5e-34	116.7	0.6	1.8	2	0	0	2	2	2	1	C-terminal	region	of	MMR_HSR1	domain
MMR_HSR1	PF01926.23	gi|84489469|ref|YP_447701.1|	-	9.2e-23	80.5	0.1	9.2e-23	80.5	0.1	2.1	3	0	0	3	3	3	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|84489469|ref|YP_447701.1|	-	1.2e-21	76.5	0.1	2.1e-21	75.7	0.1	1.4	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|84489469|ref|YP_447701.1|	-	2.1e-15	56.6	0.5	1.3e-13	50.8	0.0	2.3	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|84489469|ref|YP_447701.1|	-	1.1e-07	31.9	3.9	0.0065	16.4	0.5	2.6	3	0	0	3	3	3	2	RsgA	GTPase
Arf	PF00025.21	gi|84489469|ref|YP_447701.1|	-	0.00077	19.0	0.9	0.031	13.7	0.1	2.7	1	1	1	2	2	2	1	ADP-ribosylation	factor	family
Dynamin_N	PF00350.23	gi|84489469|ref|YP_447701.1|	-	0.0017	18.5	4.1	0.052	13.6	4.1	3.3	1	1	0	1	1	1	1	Dynamin	family
YchF-GTPase_C	PF06071.13	gi|84489469|ref|YP_447701.1|	-	0.0068	16.6	0.1	0.053	13.7	0.1	2.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF933)
Roc	PF08477.13	gi|84489469|ref|YP_447701.1|	-	0.079	13.2	0.0	2.7	8.2	0.0	2.7	1	1	1	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
TMPIT	PF07851.13	gi|84489469|ref|YP_447701.1|	-	0.15	11.3	0.3	0.21	10.8	0.3	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
Csm1_N	PF18504.1	gi|84489469|ref|YP_447701.1|	-	0.27	11.6	2.7	0.74	10.2	2.7	1.7	1	0	0	1	1	1	0	Csm1	N-terminal	domain
GTP_EFTU	PF00009.27	gi|84489469|ref|YP_447701.1|	-	0.4	10.2	3.0	4.6	6.7	0.1	3.2	2	1	2	4	4	4	0	Elongation	factor	Tu	GTP	binding	domain
cobW	PF02492.19	gi|84489469|ref|YP_447701.1|	-	0.44	10.1	2.8	16	5.0	0.1	3.1	2	1	1	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
Tropomyosin_1	PF12718.7	gi|84489469|ref|YP_447701.1|	-	1.5	8.9	6.4	0.31	11.2	3.1	1.5	2	0	0	2	2	1	0	Tropomyosin	like
MAF_flag10	PF01973.18	gi|84489470|ref|YP_447702.1|	-	5.1e-37	127.2	2.4	7.2e-37	126.7	2.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.16	gi|84489470|ref|YP_447702.1|	-	0.032	14.3	0.0	0.12	12.4	0.0	1.9	2	0	0	2	2	2	0	Thiamin	pyrophosphokinase,	catalytic	domain
Torus	PF16131.5	gi|84489470|ref|YP_447702.1|	-	0.037	14.7	0.5	0.059	14.1	0.5	1.3	1	0	0	1	1	1	0	Torus	domain
Cas_Cas6	PF01881.16	gi|84489470|ref|YP_447702.1|	-	0.26	11.8	2.4	0.29	11.7	0.2	2.1	2	0	0	2	2	2	0	CRISPR	associated	protein	Cas6
Aminotran_5	PF00266.19	gi|84489471|ref|YP_447703.1|	-	9.6e-42	143.3	0.1	1.2e-41	142.9	0.1	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|84489471|ref|YP_447703.1|	-	8.1e-08	31.2	0.5	1.4e-07	30.4	0.3	1.3	1	1	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Ammonium_transp	PF00909.21	gi|84489472|ref|YP_447704.1|	-	5.6e-128	427.0	38.2	6.3e-128	426.9	38.2	1.0	1	0	0	1	1	1	1	Ammonium	Transporter	Family
P-II	PF00543.22	gi|84489473|ref|YP_447705.1|	-	7.9e-36	122.7	2.6	8.9e-36	122.6	2.6	1.0	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
PrmA	PF06325.13	gi|84489473|ref|YP_447705.1|	-	0.0099	15.3	0.0	0.011	15.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
F420_oxidored	PF03807.17	gi|84489474|ref|YP_447706.1|	-	2.8e-14	53.5	0.4	5e-14	52.7	0.1	1.6	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
IlvN	PF07991.12	gi|84489474|ref|YP_447706.1|	-	0.00025	20.7	0.3	0.00088	18.9	0.1	1.9	2	1	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
ApbA	PF02558.16	gi|84489474|ref|YP_447706.1|	-	0.012	15.2	0.0	0.019	14.6	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DnaJ_C	PF01556.18	gi|84489474|ref|YP_447706.1|	-	0.019	15.1	0.0	0.027	14.5	0.0	1.3	1	0	0	1	1	1	0	DnaJ	C	terminal	domain
Semialdhyde_dh	PF01118.24	gi|84489474|ref|YP_447706.1|	-	0.073	13.5	0.2	0.31	11.5	0.0	2.0	2	1	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
P-II	PF00543.22	gi|84489475|ref|YP_447707.1|	-	1.4e-35	122.0	4.0	1.5e-35	121.8	4.0	1.0	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
Glu_synthase	PF01645.17	gi|84489476|ref|YP_447708.1|	-	1.9e-126	422.1	5.5	3.2e-126	421.4	5.5	1.4	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
FMN_dh	PF01070.18	gi|84489476|ref|YP_447708.1|	-	1.2e-12	47.6	15.0	9.3e-11	41.3	11.9	3.0	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
NMO	PF03060.15	gi|84489476|ref|YP_447708.1|	-	1.2e-10	41.3	9.2	2.1e-10	40.5	8.3	1.6	1	1	0	1	1	1	1	Nitronate	monooxygenase
Fer4	PF00037.27	gi|84489476|ref|YP_447708.1|	-	2e-08	33.7	20.9	5.5e-07	29.1	3.5	3.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Glu_syn_central	PF04898.14	gi|84489476|ref|YP_447708.1|	-	1.3e-07	31.4	0.3	0.00016	21.3	0.1	2.2	2	0	0	2	2	2	2	Glutamate	synthase	central	domain
Fer4_9	PF13187.6	gi|84489476|ref|YP_447708.1|	-	2.6e-07	30.7	18.5	5.8e-06	26.4	12.1	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489476|ref|YP_447708.1|	-	3.4e-07	30.3	11.7	3.4e-07	30.3	11.7	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489476|ref|YP_447708.1|	-	1.9e-06	28.4	24.1	0.00033	21.2	13.9	3.3	2	1	2	4	4	4	2	4Fe-4S	dicluster	domain
IMPDH	PF00478.25	gi|84489476|ref|YP_447708.1|	-	3.3e-06	26.3	11.6	3.3e-06	26.3	11.6	2.5	3	1	0	3	3	3	1	IMP	dehydrogenase	/	GMP	reductase	domain
Fer4_10	PF13237.6	gi|84489476|ref|YP_447708.1|	-	3.4e-06	27.1	16.3	0.0044	17.1	1.5	3.2	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489476|ref|YP_447708.1|	-	0.00077	20.3	19.7	0.022	15.7	3.0	3.6	2	1	2	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|84489476|ref|YP_447708.1|	-	0.0016	18.5	24.8	0.0054	16.7	1.9	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
His_biosynth	PF00977.21	gi|84489476|ref|YP_447708.1|	-	0.0021	17.6	1.3	0.0021	17.5	0.2	1.5	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.21	gi|84489476|ref|YP_447708.1|	-	0.0072	15.6	2.0	0.011	15.0	2.0	1.4	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
Fer4_17	PF13534.6	gi|84489476|ref|YP_447708.1|	-	0.013	16.0	22.4	0.32	11.5	2.7	3.6	2	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489476|ref|YP_447708.1|	-	0.027	14.6	26.5	0.045	13.9	3.1	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489476|ref|YP_447708.1|	-	0.049	14.1	19.7	0.07	13.6	0.7	3.4	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489476|ref|YP_447708.1|	-	0.062	13.8	23.8	0.57	10.8	1.5	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
FrhB_FdhB_C	PF04432.13	gi|84489477|ref|YP_447709.1|	-	1.8e-40	138.3	0.3	1.8e-40	138.3	0.3	1.8	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|84489477|ref|YP_447709.1|	-	1.1e-15	57.5	0.1	4.9e-15	55.4	0.0	2.0	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_9	PF13187.6	gi|84489477|ref|YP_447709.1|	-	5.5e-06	26.4	9.3	5.5e-06	26.4	9.3	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489477|ref|YP_447709.1|	-	7e-05	22.5	4.6	7e-05	22.5	4.6	3.7	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84489477|ref|YP_447709.1|	-	0.00076	19.5	11.0	0.00076	19.5	11.0	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489477|ref|YP_447709.1|	-	0.0008	19.9	6.4	0.0024	18.4	0.1	2.8	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489477|ref|YP_447709.1|	-	0.0011	18.9	3.5	0.0011	18.9	3.5	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489477|ref|YP_447709.1|	-	0.0041	17.7	10.0	0.0041	17.7	10.0	2.6	2	1	1	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489477|ref|YP_447709.1|	-	0.0043	17.2	8.4	0.0043	17.2	8.4	2.4	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489477|ref|YP_447709.1|	-	0.0062	16.6	3.1	0.0062	16.6	3.1	3.3	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489477|ref|YP_447709.1|	-	0.018	15.5	2.9	0.018	15.5	2.9	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489477|ref|YP_447709.1|	-	0.021	15.8	13.4	0.13	13.2	3.0	3.7	3	1	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Furin-like_2	PF15913.5	gi|84489477|ref|YP_447709.1|	-	0.031	14.4	2.1	0.086	13.0	2.1	1.7	1	0	0	1	1	1	0	Furin-like	repeat,	cysteine-rich
Fer4_8	PF13183.6	gi|84489477|ref|YP_447709.1|	-	0.11	12.9	10.8	0.084	13.3	1.4	2.8	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489477|ref|YP_447709.1|	-	2	8.7	7.7	12	6.2	1.9	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
GXGXG	PF01493.19	gi|84489478|ref|YP_447710.1|	-	1.9e-29	102.6	11.8	2.5e-29	102.3	11.8	1.1	1	0	0	1	1	1	1	GXGXG	motif
GATase_7	PF13537.6	gi|84489479|ref|YP_447711.1|	-	2.2e-17	63.1	0.0	7.1e-17	61.5	0.0	1.8	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|84489479|ref|YP_447711.1|	-	4e-17	62.7	0.0	6.2e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.21	gi|84489479|ref|YP_447711.1|	-	0.00041	19.2	0.4	0.2	10.3	0.0	2.8	3	0	0	3	3	3	2	Glutamine	amidotransferases	class-II
GATase_4	PF13230.6	gi|84489479|ref|YP_447711.1|	-	0.006	15.5	0.0	0.0091	14.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SNO	PF01174.19	gi|84489480|ref|YP_447712.1|	-	1.2e-50	172.0	0.1	1.4e-50	171.8	0.1	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase	PF00117.28	gi|84489480|ref|YP_447712.1|	-	1.5e-08	34.6	0.0	2.9e-08	33.7	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.14	gi|84489480|ref|YP_447712.1|	-	9.5e-05	22.1	0.5	0.00019	21.1	0.3	1.6	1	1	1	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.17	gi|84489480|ref|YP_447712.1|	-	0.012	15.3	0.1	0.017	14.7	0.1	1.3	1	0	0	1	1	1	0	Peptidase	family	S51
Peptidase_C26	PF07722.13	gi|84489480|ref|YP_447712.1|	-	0.037	13.8	0.5	1.7	8.3	0.5	2.8	1	1	0	1	1	1	0	Peptidase	C26
Ldh_1_N	PF00056.23	gi|84489481|ref|YP_447713.1|	-	9.4e-38	129.5	0.3	1.4e-37	128.9	0.3	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.18	gi|84489481|ref|YP_447713.1|	-	3.1e-24	85.8	0.0	5.6e-24	85.0	0.0	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Glyco_hydro_4	PF02056.16	gi|84489481|ref|YP_447713.1|	-	0.026	14.1	0.0	0.069	12.7	0.0	1.7	2	0	0	2	2	2	0	Family	4	glycosyl	hydrolase
Semialdhyde_dh	PF01118.24	gi|84489481|ref|YP_447713.1|	-	0.045	14.2	0.1	0.12	12.9	0.0	1.8	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|84489481|ref|YP_447713.1|	-	0.11	12.6	0.0	0.23	11.6	0.0	1.6	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
HEAT_2	PF13646.6	gi|84489482|ref|YP_447714.1|	-	3.9e-25	88.0	0.0	1.4e-15	57.5	0.0	2.4	1	1	1	2	2	2	2	HEAT	repeats
HEAT_PBS	PF03130.16	gi|84489482|ref|YP_447714.1|	-	1.2e-13	50.3	0.0	0.0094	16.5	0.0	4.3	4	0	0	4	4	4	3	PBS	lyase	HEAT-like	repeat
HEAT	PF02985.22	gi|84489482|ref|YP_447714.1|	-	8e-12	44.4	0.0	0.0018	18.4	0.0	4.4	5	0	0	5	5	5	3	HEAT	repeat
HEAT_EZ	PF13513.6	gi|84489482|ref|YP_447714.1|	-	0.0001	22.7	0.0	0.033	14.7	0.0	2.8	2	0	0	2	2	2	1	HEAT-like	repeat
DNA_alkylation	PF08713.11	gi|84489482|ref|YP_447714.1|	-	0.00089	19.0	0.2	0.0014	18.4	0.2	1.3	1	0	0	1	1	1	1	DNA	alkylation	repair	enzyme
Cnd1	PF12717.7	gi|84489482|ref|YP_447714.1|	-	0.0078	16.3	0.0	4.3	7.3	0.0	3.3	2	1	2	4	4	4	2	non-SMC	mitotic	condensation	complex	subunit	1
RTP1_C1	PF10363.9	gi|84489482|ref|YP_447714.1|	-	0.028	14.6	0.0	1.2	9.3	0.0	2.8	1	1	0	2	2	2	0	Required	for	nuclear	transport	of	RNA	pol	II	C-terminus	1
Telomere_reg-2	PF10193.9	gi|84489482|ref|YP_447714.1|	-	0.15	12.5	0.1	0.7	10.4	0.0	2.1	2	1	1	3	3	3	0	Telomere	length	regulation	protein
Iso_dh	PF00180.20	gi|84489483|ref|YP_447715.1|	-	5.3e-101	338.2	0.1	6.5e-101	337.9	0.1	1.1	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
DUF1564	PF07600.11	gi|84489483|ref|YP_447715.1|	-	0.02	14.6	0.0	0.71	9.5	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1564)
FBPase_3	PF01950.16	gi|84489484|ref|YP_447716.1|	-	5.6e-186	618.0	0.0	6.3e-186	617.8	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Abhydrolase_1	PF00561.20	gi|84489485|ref|YP_447717.1|	-	5.7e-36	124.5	0.0	7.8e-36	124.0	0.0	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
CBS	PF00571.28	gi|84489485|ref|YP_447717.1|	-	1.5e-26	92.6	1.8	7.3e-13	48.8	0.1	3.4	3	0	0	3	3	3	2	CBS	domain
Hydrolase_4	PF12146.8	gi|84489485|ref|YP_447717.1|	-	0.0015	17.9	0.0	0.0035	16.6	0.0	1.6	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Esterase	PF00756.20	gi|84489485|ref|YP_447717.1|	-	0.0062	16.2	0.0	0.0096	15.6	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
Abhydrolase_6	PF12697.7	gi|84489485|ref|YP_447717.1|	-	0.16	12.6	0.0	0.19	12.3	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Cys_Met_Meta_PP	PF01053.20	gi|84489486|ref|YP_447718.1|	-	7.8e-139	462.5	0.0	8.8e-139	462.3	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|84489486|ref|YP_447718.1|	-	5e-11	42.5	0.1	8.1e-11	41.8	0.1	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|84489486|ref|YP_447718.1|	-	5e-08	32.3	0.1	3.5e-07	29.5	0.1	1.9	2	0	0	2	2	2	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|84489486|ref|YP_447718.1|	-	6e-06	25.7	0.0	9e-06	25.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Met_gamma_lyase	PF06838.11	gi|84489486|ref|YP_447718.1|	-	0.0054	15.3	0.1	0.01	14.4	0.1	1.5	1	0	0	1	1	1	1	Methionine	gamma-lyase
E1-E2_ATPase	PF00122.20	gi|84489487|ref|YP_447719.1|	-	2.2e-45	154.4	0.9	2.2e-45	154.4	0.9	2.5	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|84489487|ref|YP_447719.1|	-	6.5e-38	131.1	0.0	1e-37	130.5	0.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|84489487|ref|YP_447719.1|	-	9.2e-05	22.3	3.1	9.2e-05	22.3	3.1	2.5	3	1	0	3	3	3	1	haloacid	dehalogenase-like	hydrolase
CBS	PF00571.28	gi|84489487|ref|YP_447719.1|	-	0.0075	16.7	0.6	0.09	13.2	0.1	2.9	3	0	0	3	3	3	1	CBS	domain
HAD_2	PF13419.6	gi|84489487|ref|YP_447719.1|	-	0.0096	16.0	0.1	0.026	14.6	0.1	1.8	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
PIG-H	PF10181.9	gi|84489487|ref|YP_447719.1|	-	0.11	12.3	0.0	0.25	11.2	0.0	1.5	1	0	0	1	1	1	0	GPI-GlcNAc	transferase	complex,	PIG-H	component
TMEM208_SND2	PF05620.11	gi|84489487|ref|YP_447719.1|	-	0.31	10.8	0.0	0.31	10.8	0.0	2.7	3	0	0	3	3	3	0	SRP-independent	targeting	protein	2/TMEM208
DUF3100	PF11299.8	gi|84489488|ref|YP_447720.1|	-	4.2e-87	291.5	18.1	4.9e-87	291.2	18.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3100)
2HCT	PF03390.15	gi|84489489|ref|YP_447721.1|	-	0.0025	16.5	10.5	0.0025	16.5	10.5	1.3	1	1	0	1	1	1	1	2-hydroxycarboxylate	transporter	family
DUF3100	PF11299.8	gi|84489490|ref|YP_447722.1|	-	1.3e-82	276.8	18.9	1.5e-82	276.5	18.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3100)
DUF1230	PF06799.11	gi|84489490|ref|YP_447722.1|	-	1.2	9.3	4.1	1.6	8.8	0.8	2.3	2	0	0	2	2	2	0	Conserved	in	the	green	lineage	and	diatoms	27
Phlebovirus_G1	PF07243.11	gi|84489490|ref|YP_447722.1|	-	6.3	5.0	5.9	11	4.3	5.9	1.3	1	0	0	1	1	1	0	Phlebovirus	glycoprotein	G1
HK	PF02110.15	gi|84489491|ref|YP_447723.1|	-	2.1e-71	240.2	6.4	2.5e-71	240.0	6.4	1.0	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Carb_kinase	PF01256.17	gi|84489491|ref|YP_447723.1|	-	4.1e-09	36.3	1.4	7.5e-09	35.4	1.4	1.3	1	1	0	1	1	1	1	Carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|84489491|ref|YP_447723.1|	-	8.7e-05	22.0	1.1	0.00014	21.3	1.1	1.4	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Gly-zipper_Omp	PF13488.6	gi|84489491|ref|YP_447723.1|	-	0.11	12.5	0.7	0.2	11.7	0.7	1.4	1	0	0	1	1	1	0	Glycine	zipper
ADP_ribosyl_GH	PF03747.14	gi|84489492|ref|YP_447724.1|	-	2.8e-64	217.7	0.0	3.6e-64	217.3	0.0	1.2	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
TMP-TENI	PF02581.17	gi|84489492|ref|YP_447724.1|	-	8.5e-62	207.7	0.4	1.5e-61	206.9	0.4	1.4	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
Colicin_Pyocin	PF01320.18	gi|84489492|ref|YP_447724.1|	-	0.16	12.1	1.1	0.42	10.8	0.2	2.2	3	0	0	3	3	3	0	Colicin	immunity	protein	/	pyocin	immunity	protein
DUF2129	PF09902.9	gi|84489493|ref|YP_447725.1|	-	0.14	12.3	1.9	0.23	11.5	1.9	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2129)
Snurportin1	PF11538.8	gi|84489494|ref|YP_447726.1|	-	0.033	14.4	0.3	0.086	13.0	0.3	1.6	1	0	0	1	1	1	0	Snurportin1
SfsA_N	PF17746.1	gi|84489495|ref|YP_447727.1|	-	0.048	13.8	0.0	0.06	13.5	0.0	1.2	1	0	0	1	1	1	0	SfsA	N-terminal	OB	domain
Barstar	PF01337.18	gi|84489496|ref|YP_447728.1|	-	1.8e-13	50.3	0.0	2.2e-13	50.0	0.0	1.2	1	0	0	1	1	1	1	Barstar	(barnase	inhibitor)
Ribonuclease	PF00545.20	gi|84489497|ref|YP_447729.1|	-	6.9e-24	84.4	0.5	1.1e-23	83.8	0.5	1.3	1	0	0	1	1	1	1	ribonuclease
Big_3_5	PF16640.5	gi|84489498|ref|YP_447730.1|	-	3.8e-06	27.0	2.0	6.1e-06	26.3	2.0	1.2	1	0	0	1	1	1	1	Bacterial	Ig-like	domain	(group	3)
DUF917	PF06032.12	gi|84489498|ref|YP_447730.1|	-	0.0026	16.7	0.1	0.0033	16.3	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
bMG3	PF11974.8	gi|84489498|ref|YP_447730.1|	-	0.0045	17.0	0.1	0.0068	16.4	0.1	1.3	1	0	0	1	1	1	1	Bacterial	alpha-2-macroglobulin	MG3	domain
CarboxypepD_reg	PF13620.6	gi|84489498|ref|YP_447730.1|	-	0.022	15.0	1.1	0.05	13.9	1.0	1.6	2	0	0	2	2	2	0	Carboxypeptidase	regulatory-like	domain
DUF1161	PF06649.12	gi|84489498|ref|YP_447730.1|	-	0.1	12.8	1.2	0.23	11.7	1.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1161)
DUF2462	PF09495.10	gi|84489498|ref|YP_447730.1|	-	0.17	12.6	2.6	0.52	11.1	2.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2462)
Mucin	PF01456.17	gi|84489499|ref|YP_447731.1|	-	0.0001	22.3	4.0	0.00012	22.1	4.0	1.1	1	0	0	1	1	1	1	Mucin-like	glycoprotein
HemX	PF04375.14	gi|84489499|ref|YP_447731.1|	-	0.00039	19.8	0.7	0.00046	19.6	0.7	1.0	1	0	0	1	1	1	1	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
SpoIIIAH	PF12685.7	gi|84489499|ref|YP_447731.1|	-	0.00049	20.0	1.9	0.00055	19.8	1.9	1.0	1	0	0	1	1	1	1	SpoIIIAH-like	protein
Fib_alpha	PF08702.10	gi|84489499|ref|YP_447731.1|	-	0.0015	18.8	5.4	0.0015	18.8	5.4	1.5	2	0	0	2	2	2	1	Fibrinogen	alpha/beta	chain	family
AI-2E_transport	PF01594.16	gi|84489499|ref|YP_447731.1|	-	0.0016	17.7	0.0	0.0017	17.6	0.0	1.0	1	0	0	1	1	1	1	AI-2E	family	transporter
DMAP1	PF05499.12	gi|84489499|ref|YP_447731.1|	-	0.0022	17.9	0.6	0.0027	17.6	0.6	1.0	1	0	0	1	1	1	1	DNA	methyltransferase	1-associated	protein	1	(DMAP1)
PRKG1_interact	PF15898.5	gi|84489499|ref|YP_447731.1|	-	0.003	18.4	2.7	0.0038	18.1	2.7	1.1	1	0	0	1	1	1	1	cGMP-dependent	protein	kinase	interacting	domain
DUF4834	PF16118.5	gi|84489499|ref|YP_447731.1|	-	0.003	18.5	0.4	0.0039	18.1	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4834)
FlxA	PF14282.6	gi|84489499|ref|YP_447731.1|	-	0.0032	17.4	8.1	0.0041	17.1	8.1	1.1	1	0	0	1	1	1	1	FlxA-like	protein
DUF4407	PF14362.6	gi|84489499|ref|YP_447731.1|	-	0.0049	16.3	0.4	0.0065	15.9	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4407)
TPR_21	PF09976.9	gi|84489499|ref|YP_447731.1|	-	0.006	16.3	0.4	0.0072	16.1	0.4	1.1	1	0	0	1	1	1	1	Tetratricopeptide	repeat-like	domain
MAS20	PF02064.15	gi|84489499|ref|YP_447731.1|	-	0.0068	16.5	0.2	0.0088	16.1	0.2	1.1	1	0	0	1	1	1	1	MAS20	protein	import	receptor
DUF3138	PF11336.8	gi|84489499|ref|YP_447731.1|	-	0.0082	14.8	0.4	0.0097	14.6	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3138)
IgaA	PF07095.11	gi|84489499|ref|YP_447731.1|	-	0.0088	14.1	0.3	0.0097	13.9	0.3	1.0	1	0	0	1	1	1	1	Intracellular	growth	attenuator	protein	IgaA
DUF3139	PF11337.8	gi|84489499|ref|YP_447731.1|	-	0.012	16.3	0.4	0.023	15.3	0.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
T2SSM	PF04612.12	gi|84489499|ref|YP_447731.1|	-	0.014	15.4	0.0	0.017	15.2	0.0	1.1	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	M
DUF948	PF06103.11	gi|84489499|ref|YP_447731.1|	-	0.021	15.0	2.0	0.035	14.4	2.0	1.4	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
Peptidase_S49_N	PF08496.10	gi|84489499|ref|YP_447731.1|	-	0.038	14.1	0.9	0.043	13.9	0.9	1.1	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
DUF1664	PF07889.12	gi|84489499|ref|YP_447731.1|	-	0.042	13.9	0.2	0.055	13.5	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF3169	PF11368.8	gi|84489499|ref|YP_447731.1|	-	0.047	13.2	0.1	0.049	13.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3169)
ABC_membrane	PF00664.23	gi|84489499|ref|YP_447731.1|	-	0.049	13.3	0.1	0.064	12.9	0.1	1.1	1	0	0	1	1	1	0	ABC	transporter	transmembrane	region
DUF4446	PF14584.6	gi|84489499|ref|YP_447731.1|	-	0.054	13.5	0.2	0.071	13.1	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Connexin	PF00029.19	gi|84489499|ref|YP_447731.1|	-	0.056	13.2	0.5	0.063	13.0	0.5	1.1	1	0	0	1	1	1	0	Connexin
Inhibitor_I53	PF11714.8	gi|84489499|ref|YP_447731.1|	-	0.06	13.6	0.1	0.081	13.1	0.1	1.3	1	0	0	1	1	1	0	Thrombin	inhibitor	Madanin
STE3	PF02076.15	gi|84489499|ref|YP_447731.1|	-	0.067	12.4	0.1	0.086	12.0	0.1	1.1	1	0	0	1	1	1	0	Pheromone	A	receptor
PAP_PilO	PF06864.12	gi|84489499|ref|YP_447731.1|	-	0.068	12.0	0.1	0.076	11.8	0.1	1.1	1	0	0	1	1	1	0	Pilin	accessory	protein	(PilO)
zinc_ribbon_15	PF17032.5	gi|84489499|ref|YP_447731.1|	-	0.082	13.7	5.0	0.12	13.1	5.0	1.5	1	1	0	1	1	1	0	zinc-ribbon	family
HCO3_cotransp	PF00955.21	gi|84489499|ref|YP_447731.1|	-	0.1	11.4	0.9	0.1	11.4	0.9	1.0	1	0	0	1	1	1	0	HCO3-	transporter	family
Ureide_permease	PF07168.11	gi|84489499|ref|YP_447731.1|	-	0.11	11.2	0.8	0.13	10.9	0.8	1.0	1	0	0	1	1	1	0	Ureide	permease
Uso1_p115_C	PF04871.13	gi|84489499|ref|YP_447731.1|	-	0.12	12.7	6.2	0.16	12.3	6.2	1.1	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
DivIVA	PF05103.13	gi|84489499|ref|YP_447731.1|	-	0.13	12.4	4.5	0.17	12.0	4.5	1.1	1	0	0	1	1	1	0	DivIVA	protein
7TM_GPCR_Str	PF10326.9	gi|84489499|ref|YP_447731.1|	-	0.13	11.5	0.4	0.19	11.1	0.4	1.2	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Str
OppC_N	PF12911.7	gi|84489499|ref|YP_447731.1|	-	0.15	12.1	0.0	0.21	11.6	0.0	1.2	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
E1_UFD	PF09358.10	gi|84489499|ref|YP_447731.1|	-	0.35	11.6	2.1	0.56	10.9	2.1	1.4	1	1	0	1	1	1	0	Ubiquitin	fold	domain
FliD_N	PF02465.18	gi|84489499|ref|YP_447731.1|	-	0.37	11.5	10.5	0.53	11.0	10.5	1.1	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	N-terminus
Chordopox_A13L	PF05961.11	gi|84489499|ref|YP_447731.1|	-	1.2	9.4	4.4	5	7.4	4.4	2.1	1	1	0	1	1	1	0	Chordopoxvirus	A13L	protein
SNF	PF00209.18	gi|84489500|ref|YP_447732.1|	-	1.5e-90	304.4	51.2	1.1e-57	196.0	28.1	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
ABC2_membrane_3	PF12698.7	gi|84489501|ref|YP_447733.1|	-	0.075	12.1	7.2	0.11	11.5	7.2	1.3	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
CcmE	PF03100.15	gi|84489501|ref|YP_447733.1|	-	0.14	12.1	0.8	0.52	10.3	0.8	2.1	1	1	0	1	1	1	0	CcmE
DUF4307	PF14155.6	gi|84489501|ref|YP_447733.1|	-	0.17	11.7	0.0	0.32	10.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4307)
DHOase	PF12890.7	gi|84489501|ref|YP_447733.1|	-	0.19	11.7	1.2	3.5	7.5	0.2	2.1	1	1	0	2	2	2	0	Dihydro-orotase-like
Thiamine_BP	PF01910.17	gi|84489502|ref|YP_447734.1|	-	9.3e-30	102.4	0.0	1e-29	102.2	0.0	1.0	1	0	0	1	1	1	1	Thiamine-binding	protein
HK	PF02110.15	gi|84489503|ref|YP_447735.1|	-	1.2e-67	227.9	7.3	1.4e-67	227.6	7.3	1.0	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.12	gi|84489503|ref|YP_447735.1|	-	3.5e-07	29.9	2.6	5.1e-07	29.3	2.6	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.17	gi|84489503|ref|YP_447735.1|	-	1.4e-06	28.0	2.2	2.8e-06	27.0	2.2	1.4	1	1	0	1	1	1	1	Carbohydrate	kinase
DUF4418	PF14387.6	gi|84489504|ref|YP_447736.1|	-	0.0017	18.6	1.2	0.0026	17.9	1.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4418)
PrgI	PF12666.7	gi|84489504|ref|YP_447736.1|	-	0.1	13.3	2.0	0.19	12.4	0.2	1.9	2	0	0	2	2	2	0	PrgI	family	protein
Usp	PF00582.26	gi|84489505|ref|YP_447737.1|	-	2.2e-29	102.7	0.2	2.6e-29	102.6	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
IlvN	PF07991.12	gi|84489505|ref|YP_447737.1|	-	0.0025	17.4	0.5	0.0031	17.1	0.5	1.1	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Adenine_glyco	PF03352.13	gi|84489506|ref|YP_447738.1|	-	1.8e-72	242.8	0.6	2.2e-72	242.6	0.6	1.0	1	0	0	1	1	1	1	Methyladenine	glycosylase
GSH-S_ATP	PF02955.16	gi|84489506|ref|YP_447738.1|	-	0.052	13.0	0.0	0.095	12.1	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
COMM_domain	PF07258.14	gi|84489507|ref|YP_447739.1|	-	0.00011	22.3	2.3	0.00054	20.0	2.3	2.2	1	1	0	1	1	1	1	COMM	domain
7TMR-HDED	PF07697.11	gi|84489507|ref|YP_447739.1|	-	0.0079	16.3	3.7	0.0098	16.0	3.7	1.2	1	0	0	1	1	1	1	7TM-HD	extracellular
Kv2channel	PF03521.14	gi|84489507|ref|YP_447739.1|	-	0.023	14.1	1.3	0.037	13.4	1.3	1.3	1	0	0	1	1	1	0	Kv2	voltage-gated	K+	channel
DUF1664	PF07889.12	gi|84489507|ref|YP_447739.1|	-	0.031	14.3	4.2	0.075	13.1	4.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Prefoldin_2	PF01920.20	gi|84489507|ref|YP_447739.1|	-	0.047	13.6	6.1	0.29	11.1	6.2	2.1	1	1	0	1	1	1	0	Prefoldin	subunit
DUF2524	PF10732.9	gi|84489507|ref|YP_447739.1|	-	0.059	13.7	1.5	0.13	12.6	1.5	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2524)
DUF848	PF05852.11	gi|84489507|ref|YP_447739.1|	-	0.1	12.7	4.3	0.23	11.6	4.3	1.5	1	0	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
CDPS	PF16715.5	gi|84489507|ref|YP_447739.1|	-	0.14	11.8	0.0	0.22	11.2	0.0	1.2	1	0	0	1	1	1	0	Cyclodipeptide	synthase
TBCC_N	PF16752.5	gi|84489507|ref|YP_447739.1|	-	0.19	12.2	3.6	0.39	11.2	3.3	1.7	1	1	0	1	1	1	0	Tubulin-specific	chaperone	C	N-terminal	domain
BLOC1_2	PF10046.9	gi|84489507|ref|YP_447739.1|	-	0.25	11.7	12.9	0.039	14.3	6.9	2.6	3	2	0	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Med4	PF10018.9	gi|84489507|ref|YP_447739.1|	-	0.31	10.7	3.7	0.41	10.3	3.7	1.3	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DASH_Dad3	PF08656.10	gi|84489507|ref|YP_447739.1|	-	0.34	11.0	7.3	18	5.5	0.1	3.3	2	1	0	2	2	2	0	DASH	complex	subunit	Dad3
Baculo_PEP_C	PF04513.12	gi|84489507|ref|YP_447739.1|	-	0.43	10.6	9.6	0.21	11.6	6.9	1.8	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
HSBP1	PF06825.12	gi|84489507|ref|YP_447739.1|	-	0.44	10.4	5.2	16	5.4	0.1	2.9	2	1	1	3	3	3	0	Heat	shock	factor	binding	protein	1
Seryl_tRNA_N	PF02403.22	gi|84489507|ref|YP_447739.1|	-	0.69	10.2	10.0	0.69	10.2	8.5	1.7	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
PMC2NT	PF08066.12	gi|84489507|ref|YP_447739.1|	-	1.2	9.9	7.2	0.43	11.3	4.2	1.9	2	1	0	2	2	1	0	PMC2NT	(NUC016)	domain
NPV_P10	PF05531.12	gi|84489507|ref|YP_447739.1|	-	1.6	9.3	10.8	0.41	11.1	5.7	2.7	3	1	0	3	3	3	0	Nucleopolyhedrovirus	P10	protein
DUF948	PF06103.11	gi|84489507|ref|YP_447739.1|	-	1.6	9.0	5.8	7.2	6.9	0.5	2.4	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
MCPsignal	PF00015.21	gi|84489507|ref|YP_447739.1|	-	1.9	8.3	6.3	0.78	9.5	2.6	2.0	2	0	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
HHH_3	PF12836.7	gi|84489508|ref|YP_447740.1|	-	2e-14	53.5	1.2	4.8e-14	52.4	0.1	2.2	2	1	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_6	PF14579.6	gi|84489508|ref|YP_447740.1|	-	0.073	13.3	0.1	7.8	6.8	0.0	2.7	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|84489508|ref|YP_447740.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RRP36	PF06102.12	gi|84489508|ref|YP_447740.1|	-	1.1	9.2	9.9	3	7.8	6.2	2.2	2	0	0	2	2	2	0	rRNA	biogenesis	protein	RRP36
HAD_2	PF13419.6	gi|84489509|ref|YP_447741.1|	-	1.8e-29	103.1	1.0	2.1e-29	102.8	1.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|84489509|ref|YP_447741.1|	-	3.5e-11	43.9	0.0	4.5e-11	43.5	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|84489509|ref|YP_447741.1|	-	3.4e-08	33.4	0.0	5.3e-08	32.8	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.26	gi|84489509|ref|YP_447741.1|	-	1.6e-06	28.6	0.0	0.0015	18.8	0.0	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
PNK3P	PF08645.11	gi|84489509|ref|YP_447741.1|	-	0.00011	21.9	1.7	0.00079	19.2	1.7	2.2	1	1	0	1	1	1	1	Polynucleotide	kinase	3	phosphatase
Put_Phosphatase	PF06888.12	gi|84489509|ref|YP_447741.1|	-	0.0078	15.6	0.4	0.084	12.3	0.1	2.0	2	0	0	2	2	2	1	Putative	Phosphatase
Hydrolase_6	PF13344.6	gi|84489509|ref|YP_447741.1|	-	0.081	13.0	0.0	0.56	10.4	0.0	2.4	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|84489509|ref|YP_447741.1|	-	0.24	11.1	7.2	0.94	9.2	3.2	2.5	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
F_actin_cap_B	PF01115.17	gi|84489510|ref|YP_447742.1|	-	0.00054	19.7	0.0	0.00055	19.6	0.0	1.1	1	0	0	1	1	1	1	F-actin	capping	protein,	beta	subunit
DUF1802	PF08819.11	gi|84489511|ref|YP_447743.1|	-	4.8e-35	121.0	0.0	5.5e-35	120.8	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1802)
Peptidase_M24_C	PF16188.5	gi|84489511|ref|YP_447743.1|	-	0.0027	17.7	0.6	0.0077	16.3	0.2	2.0	3	1	0	3	3	3	1	C-terminal	region	of	peptidase_M24
NIR_SIR	PF01077.22	gi|84489512|ref|YP_447744.1|	-	9.1e-29	100.0	1.7	2.4e-28	98.6	0.9	1.8	2	0	0	2	2	2	1	Nitrite	and	sulphite	reductase	4Fe-4S	domain
Fer4	PF00037.27	gi|84489512|ref|YP_447744.1|	-	9e-12	44.3	11.5	1.2e-06	28.0	2.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
NIR_SIR_ferr	PF03460.17	gi|84489512|ref|YP_447744.1|	-	9.7e-12	44.6	0.0	1.6e-11	43.8	0.0	1.3	1	0	0	1	1	1	1	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
Fer4_6	PF12837.7	gi|84489512|ref|YP_447744.1|	-	8e-10	38.4	19.1	4.4e-06	26.5	2.5	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489512|ref|YP_447744.1|	-	6.1e-08	33.1	13.9	0.0013	19.3	0.1	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489512|ref|YP_447744.1|	-	8.2e-08	32.3	14.6	0.00082	19.5	7.5	2.5	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489512|ref|YP_447744.1|	-	4.9e-06	26.6	19.9	9.7e-05	22.4	7.9	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489512|ref|YP_447744.1|	-	2.8e-05	23.9	20.9	7.4e-05	22.6	3.1	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84489512|ref|YP_447744.1|	-	0.0019	18.6	18.9	0.0063	16.9	2.5	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|84489512|ref|YP_447744.1|	-	0.0024	18.6	8.4	0.079	13.7	0.5	2.9	3	0	0	3	3	2	2	4Fe-4S	single	cluster	domain
Fer4_10	PF13237.6	gi|84489512|ref|YP_447744.1|	-	0.0026	17.9	14.1	0.0026	17.9	14.1	2.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489512|ref|YP_447744.1|	-	0.0038	18.1	16.6	0.093	13.7	1.1	3.2	2	1	2	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.6	gi|84489512|ref|YP_447744.1|	-	0.041	14.4	8.9	0.22	12.1	0.9	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|84489512|ref|YP_447744.1|	-	0.077	14.0	5.9	0.077	14.0	5.9	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84489512|ref|YP_447744.1|	-	0.34	11.5	17.7	1.8	9.2	2.7	2.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489512|ref|YP_447744.1|	-	0.84	9.9	16.5	0.13	12.4	11.8	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489512|ref|YP_447744.1|	-	1.1	9.8	17.1	14	6.2	3.1	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489512|ref|YP_447744.1|	-	3.8	8.4	21.3	0.24	12.3	2.9	3.0	1	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Tctex-1	PF03645.13	gi|84489513|ref|YP_447745.1|	-	0.0046	17.2	1.7	0.0064	16.7	1.7	1.4	1	1	0	1	1	1	1	Tctex-1	family
ROK	PF00480.20	gi|84489513|ref|YP_447745.1|	-	0.061	12.8	0.3	0.071	12.6	0.3	1.1	1	0	0	1	1	1	0	ROK	family
DUF349	PF03993.12	gi|84489513|ref|YP_447745.1|	-	0.077	13.3	1.2	0.23	11.8	1.2	1.8	1	1	0	1	1	1	0	Domain	of	Unknown	Function	(DUF349)
Fib_alpha	PF08702.10	gi|84489513|ref|YP_447745.1|	-	0.13	12.4	3.7	0.15	12.3	3.7	1.1	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
COQ7	PF03232.13	gi|84489513|ref|YP_447745.1|	-	0.14	11.9	1.1	0.15	11.8	1.1	1.1	1	0	0	1	1	1	0	Ubiquinone	biosynthesis	protein	COQ7
Glu-tRNAGln	PF02686.15	gi|84489513|ref|YP_447745.1|	-	0.16	12.3	0.9	0.28	11.5	0.9	1.7	1	1	0	1	1	1	0	Glu-tRNAGln	amidotransferase	C	subunit
CdvA	PF18822.1	gi|84489513|ref|YP_447745.1|	-	0.2	11.5	6.7	0.34	10.7	6.7	1.5	1	1	0	1	1	1	0	CdvA-like	coiled-coil	domain
COMPASS-Shg1	PF05205.12	gi|84489513|ref|YP_447745.1|	-	1.3	9.8	6.0	7.5	7.3	2.3	2.2	1	1	1	2	2	2	0	COMPASS	(Complex	proteins	associated	with	Set1p)	component	shg1
HATPase_c	PF02518.26	gi|84489515|ref|YP_447747.1|	-	0.00029	21.3	0.0	0.0004	20.8	0.0	1.2	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DUF4325	PF14213.6	gi|84489516|ref|YP_447748.1|	-	0.00036	20.2	0.5	0.0006	19.5	0.5	1.5	1	0	0	1	1	1	1	STAS-like	domain	of	unknown	function	(DUF4325)
Ago_N_1	PF18351.1	gi|84489517|ref|YP_447749.1|	-	1.2	9.6	8.1	3.4	8.2	0.4	3.3	1	1	2	3	3	3	0	Fungal	Argonaute	N-terminal	domain
FAINT	PF04385.15	gi|84489518|ref|YP_447750.1|	-	0.04	14.0	0.6	0.04	14.0	0.6	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function,	DUF529
Retrotran_gag_3	PF14244.6	gi|84489518|ref|YP_447750.1|	-	0.32	10.8	1.9	0.86	9.5	0.0	2.6	3	0	0	3	3	3	0	gag-polypeptide	of	LTR	copia-type
AAA_assoc	PF14363.6	gi|84489519|ref|YP_447751.1|	-	0.12	12.7	1.6	0.23	11.8	1.6	1.7	1	1	0	1	1	1	0	Domain	associated	at	C-terminal	with	AAA
HEPN	PF05168.14	gi|84489520|ref|YP_447752.1|	-	2.3e-05	24.5	5.4	2.7e-05	24.3	5.4	1.1	1	0	0	1	1	1	1	HEPN	domain
NADase_NGA	PF07461.11	gi|84489520|ref|YP_447752.1|	-	0.068	12.1	6.8	0.076	11.9	6.8	1.1	1	0	0	1	1	1	0	Nicotine	adenine	dinucleotide	glycohydrolase	(NADase)
SpoIIIAH	PF12685.7	gi|84489521|ref|YP_447753.1|	-	0.0031	17.4	1.1	0.0033	17.3	1.1	1.1	1	0	0	1	1	1	1	SpoIIIAH-like	protein
DUF3566	PF12089.8	gi|84489521|ref|YP_447753.1|	-	0.0082	16.5	0.1	0.01	16.2	0.1	1.1	1	0	0	1	1	1	1	Transmembrane	domain	of	unknown	function	(DUF3566)
Baculo_11_kDa	PF06143.11	gi|84489521|ref|YP_447753.1|	-	0.0088	15.6	2.4	0.01	15.4	1.9	1.5	1	1	0	1	1	1	1	Baculovirus	11	kDa	family
O-antigen_lig	PF13425.6	gi|84489521|ref|YP_447753.1|	-	0.01	14.7	0.8	0.011	14.6	0.8	1.0	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
DUF2371	PF10177.9	gi|84489521|ref|YP_447753.1|	-	0.01	16.0	0.0	0.013	15.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
DUF3357	PF11837.8	gi|84489521|ref|YP_447753.1|	-	0.012	16.1	0.0	0.014	15.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3357)
ABC2_membrane_3	PF12698.7	gi|84489521|ref|YP_447753.1|	-	0.037	13.1	0.4	0.042	13.0	0.4	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Ly49	PF08391.10	gi|84489521|ref|YP_447753.1|	-	0.042	14.2	0.1	0.052	13.9	0.1	1.2	1	0	0	1	1	1	0	Ly49-like	protein,	N-terminal	region
Pilin_N	PF07790.11	gi|84489521|ref|YP_447753.1|	-	0.07	14.1	1.2	0.1	13.6	1.1	1.5	1	1	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
DUF4834	PF16118.5	gi|84489521|ref|YP_447753.1|	-	0.076	14.0	4.2	0.12	13.3	4.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
EphA2_TM	PF14575.6	gi|84489521|ref|YP_447753.1|	-	0.12	13.2	1.2	0.23	12.4	1.2	1.5	1	1	0	1	1	1	0	Ephrin	type-A	receptor	2	transmembrane	domain
Zip	PF02535.22	gi|84489521|ref|YP_447753.1|	-	0.17	11.1	0.1	0.17	11.1	0.1	1.0	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF5316	PF17247.2	gi|84489521|ref|YP_447753.1|	-	0.21	11.6	1.7	0.33	11.0	1.2	1.6	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5316)
TMEM100	PF16311.5	gi|84489521|ref|YP_447753.1|	-	1.1	8.8	4.8	0.55	9.8	2.7	1.5	1	1	1	2	2	2	0	Transmembrane	protein	100
Big_3_5	PF16640.5	gi|84489522|ref|YP_447754.1|	-	3.9e-12	46.2	45.2	1.7e-06	28.1	0.7	7.7	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	3)
Chlam_PMP	PF02415.17	gi|84489522|ref|YP_447754.1|	-	5e-06	26.7	114.3	0.46	11.1	0.1	17.7	16	0	0	16	16	16	9	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_1	PF02369.16	gi|84489522|ref|YP_447754.1|	-	0.0011	19.0	0.2	0.0011	19.0	0.2	5.5	6	0	0	6	6	6	1	Bacterial	Ig-like	domain	(group	1)
DUF3426	PF11906.8	gi|84489522|ref|YP_447754.1|	-	0.02	15.0	0.0	0.07	13.3	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3426)
TcfC	PF16967.5	gi|84489522|ref|YP_447754.1|	-	0.023	14.2	6.0	0.1	12.1	0.2	4.0	4	0	0	4	4	4	0	E-set	like	domain
DUF4176	PF13780.6	gi|84489522|ref|YP_447754.1|	-	0.26	11.3	5.4	30	4.7	0.1	4.6	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4176)
adh_short_C2	PF13561.6	gi|84489523|ref|YP_447755.1|	-	9.6e-51	172.6	0.0	1.3e-50	172.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|84489523|ref|YP_447755.1|	-	2e-41	141.6	0.5	2.5e-41	141.3	0.5	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|84489523|ref|YP_447755.1|	-	6.4e-16	58.8	0.0	7.7e-16	58.5	0.0	1.2	1	0	0	1	1	1	1	KR	domain
PALP	PF00291.25	gi|84489523|ref|YP_447755.1|	-	0.025	14.0	0.0	0.037	13.4	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
3HCDH_N	PF02737.18	gi|84489523|ref|YP_447755.1|	-	0.029	14.3	0.2	0.044	13.7	0.2	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Adenine_deam_C	PF13382.6	gi|84489523|ref|YP_447755.1|	-	0.13	11.7	0.3	0.26	10.6	0.1	1.6	2	0	0	2	2	2	0	Adenine	deaminase	C-terminal	domain
T4SS-DNA_transf	PF02534.14	gi|84489523|ref|YP_447755.1|	-	0.16	10.8	0.3	0.24	10.2	0.3	1.3	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
Acyl_transf_3	PF01757.22	gi|84489524|ref|YP_447756.1|	-	4.9e-29	101.5	42.2	5.7e-29	101.3	42.2	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF2180	PF09947.9	gi|84489525|ref|YP_447757.1|	-	5.8e-37	125.5	5.2	6.4e-37	125.4	5.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2180)
Tnp_zf-ribbon_2	PF13842.6	gi|84489525|ref|YP_447757.1|	-	0.00026	21.7	3.4	0.0028	18.4	0.9	2.1	2	0	0	2	2	2	1	DDE_Tnp_1-like	zinc-ribbon
FYVE	PF01363.21	gi|84489525|ref|YP_447757.1|	-	0.0078	16.3	0.6	0.01	15.9	0.6	1.2	1	0	0	1	1	1	1	FYVE	zinc	finger
zf-UBP_var	PF17807.1	gi|84489525|ref|YP_447757.1|	-	0.017	14.9	1.1	0.017	14.9	1.1	1.6	2	0	0	2	2	2	0	Variant	UBP	zinc	finger
zf-AD	PF07776.15	gi|84489525|ref|YP_447757.1|	-	0.56	10.5	5.2	3.2	8.1	5.2	2.3	1	1	0	1	1	1	0	Zinc-finger	associated	domain	(zf-AD)
Transp_Tc5_C	PF04236.15	gi|84489525|ref|YP_447757.1|	-	0.56	10.6	6.9	0.27	11.6	2.9	2.0	2	0	0	2	2	2	0	Tc5	transposase	C-terminal	domain
Prok-RING_1	PF14446.6	gi|84489525|ref|YP_447757.1|	-	3.1	7.8	9.2	1.4	8.9	5.4	2.2	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
TetR_N	PF00440.23	gi|84489526|ref|YP_447758.1|	-	5.9e-13	48.4	0.0	1e-12	47.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
TetR_C_4	PF08359.11	gi|84489526|ref|YP_447758.1|	-	0.00061	19.9	0.5	0.00061	19.9	0.5	1.6	2	0	0	2	2	2	1	YsiA-like	protein,	C-terminal	region
TetR_C_2	PF08361.11	gi|84489526|ref|YP_447758.1|	-	0.00068	19.7	0.1	0.0012	19.0	0.1	1.4	1	0	0	1	1	1	1	MAATS-type	transcriptional	repressor,	C-terminal	region
TetR_C_29	PF17938.1	gi|84489526|ref|YP_447758.1|	-	0.0012	18.9	0.0	0.0022	18.0	0.0	1.5	1	0	0	1	1	1	1	Tetracyclin	repressor-like,	C-terminal	domain
TetR_C_5	PF08360.11	gi|84489526|ref|YP_447758.1|	-	0.0014	18.8	3.8	0.0014	18.8	3.8	2.3	1	1	1	2	2	2	1	QacR-like	protein,	C-terminal	region
TetR_C_17	PF17922.1	gi|84489526|ref|YP_447758.1|	-	0.0019	18.2	0.3	0.0046	17.0	0.3	1.7	1	1	0	1	1	1	1	Tetracyclin	repressor-like,	C-terminal	domain
TetR_C_10	PF16295.5	gi|84489526|ref|YP_447758.1|	-	0.0062	16.8	0.4	0.0094	16.2	0.4	1.3	1	0	0	1	1	1	1	Tetracyclin	repressor-like,	C-terminal	domain
TetR_C_26	PF17934.1	gi|84489526|ref|YP_447758.1|	-	0.058	13.7	1.1	0.096	13.0	0.6	1.7	2	0	0	2	2	2	0	Tetracyclin	repressor-like,	C-terminal	domain
HTH_24	PF13412.6	gi|84489526|ref|YP_447758.1|	-	0.11	12.0	0.0	0.32	10.6	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
TetR_C_24	PF17932.1	gi|84489526|ref|YP_447758.1|	-	0.13	12.5	0.0	0.2	11.9	0.0	1.3	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
Put_DNA-bind_N	PF06971.13	gi|84489526|ref|YP_447758.1|	-	0.15	12.1	0.2	3.7	7.6	0.0	2.9	2	1	1	3	3	3	0	Putative	DNA-binding	protein	N-terminus
3HCDH_N	PF02737.18	gi|84489527|ref|YP_447759.1|	-	4.7e-35	121.1	0.0	6.7e-34	117.3	0.0	2.3	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.22	gi|84489527|ref|YP_447759.1|	-	3.1e-16	59.7	0.0	5.9e-16	58.9	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.15	gi|84489527|ref|YP_447759.1|	-	6.1e-06	26.5	0.0	0.14	12.4	0.0	2.5	3	0	0	3	3	3	2	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|84489527|ref|YP_447759.1|	-	4.4e-05	23.5	0.3	0.0057	16.6	0.1	2.7	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
IlvN	PF07991.12	gi|84489527|ref|YP_447759.1|	-	0.0035	16.9	0.1	3	7.4	0.0	2.3	2	0	0	2	2	2	2	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
F420_oxidored	PF03807.17	gi|84489527|ref|YP_447759.1|	-	0.03	14.9	0.2	4.8	7.8	0.1	2.3	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.14	gi|84489527|ref|YP_447759.1|	-	0.043	13.4	0.1	6.6	6.3	0.1	2.6	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ApbA	PF02558.16	gi|84489527|ref|YP_447759.1|	-	0.11	12.1	0.1	0.19	11.4	0.1	1.6	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
PP_kinase_C_1	PF17941.1	gi|84489529|ref|YP_447761.1|	-	7.8e-67	224.0	6.3	5.5e-66	221.2	3.5	2.3	2	0	0	2	2	2	1	Polyphosphate	kinase	C-terminal	domain	1
PP_kinase_C	PF13090.6	gi|84489529|ref|YP_447761.1|	-	2e-64	216.2	3.0	4.2e-64	215.2	3.0	1.5	1	0	0	1	1	1	1	Polyphosphate	kinase	C-terminal	domain	2
PP_kinase	PF02503.17	gi|84489529|ref|YP_447761.1|	-	1.1e-47	162.2	3.1	2.2e-47	161.3	3.1	1.4	1	0	0	1	1	1	1	Polyphosphate	kinase	middle	domain
PP_kinase_N	PF13089.6	gi|84489529|ref|YP_447761.1|	-	1.4e-34	118.6	2.0	4.7e-34	116.9	0.4	2.7	2	0	0	2	2	2	1	Polyphosphate	kinase	N-terminal	domain
PLDc_2	PF13091.6	gi|84489529|ref|YP_447761.1|	-	1.5e-09	37.9	4.4	0.00024	21.0	0.9	3.3	2	1	0	2	2	2	2	PLD-like	domain
Ppx-GppA	PF02541.16	gi|84489530|ref|YP_447762.1|	-	6.6e-24	84.8	0.2	7.2e-24	84.7	0.2	1.0	1	0	0	1	1	1	1	Ppx/GppA	phosphatase	family
FtsA	PF14450.6	gi|84489530|ref|YP_447762.1|	-	0.012	16.0	0.2	0.025	15.0	0.1	1.6	1	1	0	1	1	1	0	Cell	division	protein	FtsA
Zea_mays_MuDR	PF05928.11	gi|84489530|ref|YP_447762.1|	-	0.017	14.8	0.1	0.024	14.3	0.1	1.3	1	0	0	1	1	1	0	Zea	mays	MURB-like	protein	(MuDR)
Ppx-GppA	PF02541.16	gi|84489531|ref|YP_447763.1|	-	0.087	12.2	0.1	0.094	12.1	0.1	1.1	1	0	0	1	1	1	0	Ppx/GppA	phosphatase	family
Sigma70_r1_1	PF03979.14	gi|84489531|ref|YP_447763.1|	-	0.12	12.5	1.2	0.21	11.7	1.0	1.5	1	1	0	1	1	1	0	Sigma-70	factor,	region	1.1
Na_H_Exchanger	PF00999.21	gi|84489532|ref|YP_447764.1|	-	3.4e-59	200.5	56.8	4.3e-59	200.2	56.8	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|84489532|ref|YP_447764.1|	-	1.4e-22	80.2	1.0	2.9e-22	79.1	1.0	1.6	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|84489532|ref|YP_447764.1|	-	2.9e-05	23.8	0.0	9.3e-05	22.2	0.0	1.9	1	0	0	1	1	1	1	TrkA-C	domain
zinc_ribbon_2	PF13240.6	gi|84489533|ref|YP_447765.1|	-	1.4e-13	50.1	26.6	2.4e-06	27.1	5.1	3.5	3	0	0	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.7	gi|84489533|ref|YP_447765.1|	-	5.6e-13	48.7	17.4	3.4e-10	39.8	9.3	2.5	2	0	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|84489533|ref|YP_447765.1|	-	3e-12	45.5	19.9	0.00017	20.9	3.1	3.5	3	0	0	3	3	3	3	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|84489533|ref|YP_447765.1|	-	2.2e-09	38.0	20.0	0.0016	19.2	1.4	3.3	3	0	0	3	3	3	3	zinc-ribbon	family
UPF0547	PF10571.9	gi|84489533|ref|YP_447765.1|	-	1.5e-07	31.4	18.8	0.00052	20.0	3.1	3.5	3	0	0	3	3	3	3	Uncharacterised	protein	family	UPF0547
DUF35_N	PF12172.8	gi|84489533|ref|YP_447765.1|	-	0.0031	17.3	14.4	0.3	11.0	0.7	3.5	3	1	0	3	3	3	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Zn_ribbon_17	PF17120.5	gi|84489533|ref|YP_447765.1|	-	0.0034	17.0	8.3	3.2	7.4	0.4	3.2	3	0	0	3	3	3	1	Zinc-ribbon,	C4HC2	type
zf-C3HC4_3	PF13920.6	gi|84489533|ref|YP_447765.1|	-	0.0043	16.9	15.4	0.18	11.7	0.7	3.3	3	0	0	3	3	3	1	Zinc	finger,	C3HC4	type	(RING	finger)
FYDLN_acid	PF09538.10	gi|84489533|ref|YP_447765.1|	-	0.011	16.5	14.0	0.38	11.4	1.1	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
zinc-ribbon_6	PF10005.9	gi|84489533|ref|YP_447765.1|	-	0.015	16.0	12.2	0.16	12.6	0.5	3.2	2	1	1	3	3	3	0	zinc-ribbon	domain
E1-E2_ATPase	PF00122.20	gi|84489533|ref|YP_447765.1|	-	0.017	14.6	3.7	0.059	12.9	0.1	2.3	2	0	0	2	2	2	0	E1-E2	ATPase
zf_UBZ	PF18439.1	gi|84489533|ref|YP_447765.1|	-	0.023	14.3	24.5	0.92	9.2	0.3	6.1	2	2	4	6	6	6	0	Ubiquitin-Binding	Zinc	Finger
zinc_ribbon_4	PF13717.6	gi|84489533|ref|YP_447765.1|	-	0.027	14.4	12.9	17	5.5	0.0	5.8	6	0	0	6	6	6	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|84489533|ref|YP_447765.1|	-	0.046	13.8	25.4	2.7	8.2	0.3	4.9	2	2	2	4	4	4	0	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|84489533|ref|YP_447765.1|	-	0.077	13.2	0.3	0.077	13.2	0.3	3.5	3	1	0	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Lar_restr_allev	PF14354.6	gi|84489533|ref|YP_447765.1|	-	0.11	12.9	19.9	0.44	11.0	2.6	4.5	1	1	2	3	3	3	0	Restriction	alleviation	protein	Lar
zf-NADH-PPase	PF09297.11	gi|84489533|ref|YP_447765.1|	-	0.11	12.2	0.1	0.11	12.2	0.1	5.5	5	1	0	5	5	5	0	NADH	pyrophosphatase	zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|84489533|ref|YP_447765.1|	-	0.13	12.0	0.2	0.13	12.0	0.2	4.3	4	1	0	4	4	4	0	Rubredoxin	metal	binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|84489533|ref|YP_447765.1|	-	0.19	11.7	16.0	0.27	11.2	0.2	4.4	3	2	2	5	5	5	0	Transposase	zinc-ribbon	domain
zf-CHY	PF05495.12	gi|84489533|ref|YP_447765.1|	-	0.23	12.0	15.5	6	7.4	5.4	3.1	1	1	2	3	3	3	0	CHY	zinc	finger
Nudix_N_2	PF14803.6	gi|84489533|ref|YP_447765.1|	-	0.24	11.4	21.4	1	9.3	0.1	5.7	5	1	1	6	6	6	0	Nudix	N-terminal
YhfH	PF14149.6	gi|84489533|ref|YP_447765.1|	-	0.33	10.9	21.5	19	5.3	0.0	6.0	4	2	2	6	6	6	0	YhfH-like	protein
DNA_RNApol_7kD	PF03604.13	gi|84489533|ref|YP_447765.1|	-	0.34	10.6	21.8	2.1	8.1	0.4	5.8	3	1	3	6	6	6	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TMEM154	PF15102.6	gi|84489533|ref|YP_447765.1|	-	0.39	10.6	0.1	0.39	10.6	0.1	2.6	3	0	0	3	3	2	0	TMEM154	protein	family
UPF0139	PF03669.13	gi|84489533|ref|YP_447765.1|	-	0.49	10.3	2.1	0.81	9.6	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0139)
DUF5518	PF17647.1	gi|84489533|ref|YP_447765.1|	-	0.73	10.0	17.2	1	9.5	17.2	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5518)
TssN	PF17555.2	gi|84489533|ref|YP_447765.1|	-	0.8	9.0	8.9	1.3	8.4	8.9	1.3	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssN
Auto_anti-p27	PF06677.12	gi|84489533|ref|YP_447765.1|	-	1	9.5	22.3	0.8	9.9	2.1	3.7	3	1	1	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C4_Topoisom	PF01396.19	gi|84489533|ref|YP_447765.1|	-	1.3	8.9	18.3	4.3	7.2	0.1	5.7	6	0	0	6	6	6	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF4231	PF14015.6	gi|84489533|ref|YP_447765.1|	-	1.3	9.5	3.8	11	6.5	0.8	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DNA_ligase_ZBD	PF03119.16	gi|84489533|ref|YP_447765.1|	-	1.3	9.1	9.8	6.4	6.9	0.1	3.8	4	0	0	4	4	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
YacG	PF03884.14	gi|84489533|ref|YP_447765.1|	-	1.4	8.7	8.4	4.8	7.0	0.1	3.8	3	1	0	3	3	3	0	DNA	gyrase	inhibitor	YacG
Prok-RING_1	PF14446.6	gi|84489533|ref|YP_447765.1|	-	1.6	8.7	20.9	8.2	6.4	0.9	3.6	2	1	1	3	3	3	0	Prokaryotic	RING	finger	family	1
GFA	PF04828.14	gi|84489533|ref|YP_447765.1|	-	2.4	8.5	18.7	1.2	9.5	2.7	4.5	1	1	4	5	5	5	0	Glutathione-dependent	formaldehyde-activating	enzyme
MqsA_antitoxin	PF15731.5	gi|84489533|ref|YP_447765.1|	-	3.5	7.7	6.3	4.4	7.4	0.7	3.1	1	1	3	4	4	4	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
FYVE	PF01363.21	gi|84489533|ref|YP_447765.1|	-	3.8	7.7	10.7	1.3	9.2	2.1	2.8	2	1	0	2	2	2	0	FYVE	zinc	finger
SoxD	PF04267.12	gi|84489533|ref|YP_447765.1|	-	4.1	7.6	6.2	4.3	7.5	0.8	3.0	3	0	0	3	3	3	0	Sarcosine	oxidase,	delta	subunit	family
OrfB_Zn_ribbon	PF07282.11	gi|84489533|ref|YP_447765.1|	-	4.6	7.2	23.0	0.19	11.6	1.5	4.7	1	1	4	6	6	6	0	Putative	transposase	DNA-binding	domain
Cys_rich_KTR	PF14205.6	gi|84489533|ref|YP_447765.1|	-	4.8	7.1	9.3	42	4.0	0.5	3.2	2	1	1	3	3	3	0	Cysteine-rich	KTR
TF_Zn_Ribbon	PF08271.12	gi|84489533|ref|YP_447765.1|	-	5.1	6.7	30.6	0.39	10.3	4.7	4.9	2	2	4	6	6	6	0	TFIIB	zinc-binding
PolC_DP2	PF03833.13	gi|84489533|ref|YP_447765.1|	-	5.8	4.6	17.1	1.7	6.4	10.8	2.3	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Prok-RING_4	PF14447.6	gi|84489533|ref|YP_447765.1|	-	5.9	6.8	16.3	1.9	8.4	0.7	3.3	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	4
zf-C3HC4_2	PF13923.6	gi|84489533|ref|YP_447765.1|	-	6.3	6.7	21.9	0.27	11.1	1.2	3.3	3	0	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
Ogr_Delta	PF04606.12	gi|84489533|ref|YP_447765.1|	-	6.4	6.8	15.8	13	5.8	0.1	5.1	6	0	0	6	6	5	0	Ogr/Delta-like	zinc	finger
zf-MYND	PF01753.18	gi|84489533|ref|YP_447765.1|	-	7.4	6.8	11.5	10	6.3	1.0	3.4	2	2	0	2	2	2	0	MYND	finger
zinc_ribbon_2	PF13240.6	gi|84489534|ref|YP_447766.1|	-	2.1e-11	43.1	21.2	2.2e-07	30.4	6.4	3.3	2	1	1	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.7	gi|84489534|ref|YP_447766.1|	-	3.9e-10	39.6	13.3	6.3e-10	38.9	13.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|84489534|ref|YP_447766.1|	-	1.2e-09	37.2	14.2	8.8e-05	21.8	3.7	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
SHOCT	PF09851.9	gi|84489534|ref|YP_447766.1|	-	3e-06	26.8	2.9	6.1e-06	25.8	2.9	1.6	1	0	0	1	1	1	1	Short	C-terminal	domain
PolC_DP2	PF03833.13	gi|84489534|ref|YP_447766.1|	-	0.0033	15.4	1.0	0.0047	14.9	1.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
UPF0547	PF10571.9	gi|84489534|ref|YP_447766.1|	-	0.0052	16.8	8.2	0.014	15.5	0.5	2.6	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0547
YihI	PF04220.12	gi|84489534|ref|YP_447766.1|	-	0.0085	15.8	0.4	0.017	14.8	0.0	1.6	2	0	0	2	2	2	1	Der	GTPase	activator	(YihI)
GvpG	PF05120.12	gi|84489534|ref|YP_447766.1|	-	0.024	14.7	2.2	0.024	14.6	0.5	1.9	2	0	0	2	2	2	0	Gas	vesicle	protein	G
zinc-ribbons_6	PF07191.12	gi|84489534|ref|YP_447766.1|	-	0.026	14.5	7.6	0.54	10.3	7.6	2.2	1	1	0	1	1	1	0	zinc-ribbons
Zn-ribbon_8	PF09723.10	gi|84489534|ref|YP_447766.1|	-	0.043	13.9	11.5	0.59	10.3	2.6	3.6	2	1	2	4	4	4	0	Zinc	ribbon	domain
Barstar	PF01337.18	gi|84489534|ref|YP_447766.1|	-	0.081	13.0	0.0	0.19	11.8	0.0	1.6	1	0	0	1	1	1	0	Barstar	(barnase	inhibitor)
zinc_ribbon_9	PF14369.6	gi|84489534|ref|YP_447766.1|	-	0.093	13.0	0.7	0.093	13.0	0.7	2.8	2	1	1	3	3	3	0	zinc-ribbon
TF_Zn_Ribbon	PF08271.12	gi|84489534|ref|YP_447766.1|	-	0.098	12.2	16.6	0.038	13.5	3.1	3.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-tcix	PF14952.6	gi|84489534|ref|YP_447766.1|	-	0.13	11.9	10.4	1.7	8.3	4.8	2.5	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
OrfB_Zn_ribbon	PF07282.11	gi|84489534|ref|YP_447766.1|	-	0.14	12.1	12.5	0.073	13.0	2.9	3.2	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_15	PF17032.5	gi|84489534|ref|YP_447766.1|	-	0.2	12.4	14.5	4.8	8.0	14.5	2.4	1	1	0	1	1	1	0	zinc-ribbon	family
Histone_HNS	PF00816.21	gi|84489534|ref|YP_447766.1|	-	0.26	12.1	2.4	0.74	10.7	0.0	2.4	3	0	0	3	3	2	0	H-NS	histone	family
zf-TFIIB	PF13453.6	gi|84489534|ref|YP_447766.1|	-	0.29	10.5	6.0	0.94	8.9	6.0	2.0	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
tRNA-synt_1g	PF09334.11	gi|84489534|ref|YP_447766.1|	-	0.29	9.8	6.7	2.1	7.0	1.1	2.2	1	1	1	2	2	2	0	tRNA	synthetases	class	I	(M)
YnfE	PF17452.2	gi|84489534|ref|YP_447766.1|	-	0.58	10.5	4.4	0.6	10.4	0.2	2.9	3	1	1	4	4	3	0	Uncharacterized	YnfE-like
Nudix_N_2	PF14803.6	gi|84489534|ref|YP_447766.1|	-	0.92	9.5	15.4	4.8	7.2	0.1	4.1	3	1	1	4	4	4	0	Nudix	N-terminal
DNA_RNApol_7kD	PF03604.13	gi|84489534|ref|YP_447766.1|	-	1	9.1	12.1	16	5.3	0.1	3.4	2	1	1	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-CHY	PF05495.12	gi|84489534|ref|YP_447766.1|	-	2	9.0	6.8	6.7	7.3	6.8	1.9	1	1	0	1	1	1	0	CHY	zinc	finger
zf-NADH-PPase	PF09297.11	gi|84489534|ref|YP_447766.1|	-	3	7.6	9.8	13	5.6	0.1	3.3	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-B_box	PF00643.24	gi|84489534|ref|YP_447766.1|	-	3.3	7.9	7.6	4	7.7	1.7	2.3	2	0	0	2	2	2	0	B-box	zinc	finger
zf-Di19	PF05605.12	gi|84489534|ref|YP_447766.1|	-	3.4	8.1	6.1	6.2	7.2	6.1	1.4	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
MqsA_antitoxin	PF15731.5	gi|84489534|ref|YP_447766.1|	-	6.5	6.9	6.5	38	4.4	2.4	3.0	1	1	1	2	2	2	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
zf-ACC	PF17848.1	gi|84489534|ref|YP_447766.1|	-	7	6.8	8.0	3.9	7.6	0.1	3.2	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
Ogr_Delta	PF04606.12	gi|84489534|ref|YP_447766.1|	-	8.8	6.4	6.9	17	5.5	0.1	3.0	2	1	0	2	2	2	0	Ogr/Delta-like	zinc	finger
HypA	PF01155.19	gi|84489534|ref|YP_447766.1|	-	9.9	6.2	11.2	3.5e+02	1.2	11.5	2.8	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF3954	PF13128.6	gi|84489535|ref|YP_447767.1|	-	0.11	12.3	0.7	17	5.3	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3954)
LPP	PF04728.13	gi|84489535|ref|YP_447767.1|	-	2.1	8.8	5.9	1.8	9.0	0.7	2.6	3	0	0	3	3	3	0	Lipoprotein	leucine-zipper
DUF2085	PF09858.9	gi|84489536|ref|YP_447768.1|	-	2.1e-31	108.2	5.0	2.4e-31	108.0	5.0	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2085)
2TM	PF13239.6	gi|84489536|ref|YP_447768.1|	-	0.83	10.0	4.3	0.47	10.8	2.4	1.5	1	1	1	2	2	2	0	2TM	domain
PIN	PF01850.21	gi|84489538|ref|YP_447770.1|	-	1.4e-13	51.4	1.4	1.8e-13	51.1	1.4	1.1	1	0	0	1	1	1	1	PIN	domain
PrlF_antitoxin	PF15937.5	gi|84489539|ref|YP_447771.1|	-	0.00047	20.5	0.0	0.00054	20.3	0.0	1.2	1	0	0	1	1	1	1	prlF	antitoxin	for	toxin	YhaV_toxin
MazE_antitoxin	PF04014.18	gi|84489539|ref|YP_447771.1|	-	0.048	13.6	0.0	0.085	12.8	0.0	1.5	1	0	0	1	1	1	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
DUF4143	PF13635.6	gi|84489543|ref|YP_447775.1|	-	4.8e-09	36.4	0.3	5.9e-09	36.1	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
DUF2207	PF09972.9	gi|84489545|ref|YP_447777.1|	-	1e-72	245.6	24.9	1.1e-72	245.4	24.9	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
PMSR	PF01625.21	gi|84489546|ref|YP_447778.1|	-	6.1e-62	208.3	0.3	8.6e-62	207.8	0.3	1.2	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
SelR	PF01641.18	gi|84489546|ref|YP_447778.1|	-	1.6e-46	157.3	0.0	3e-46	156.4	0.0	1.4	1	0	0	1	1	1	1	SelR	domain
SNF	PF00209.18	gi|84489547|ref|YP_447779.1|	-	4.6e-84	283.0	53.3	6e-52	177.0	29.9	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
Aldo_ket_red	PF00248.21	gi|84489548|ref|YP_447780.1|	-	1e-48	166.1	0.6	1.1e-47	162.6	0.6	2.0	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_10	PF13237.6	gi|84489548|ref|YP_447780.1|	-	8.1e-11	41.9	7.0	1.8e-10	40.8	7.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489548|ref|YP_447780.1|	-	2.1e-10	40.6	6.5	4.9e-10	39.4	6.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489548|ref|YP_447780.1|	-	1.4e-09	38.3	7.6	3.1e-09	37.3	7.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|84489548|ref|YP_447780.1|	-	2e-07	30.8	5.4	0.00033	20.4	0.5	2.5	2	0	0	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_18	PF13746.6	gi|84489548|ref|YP_447780.1|	-	4.2e-07	30.1	9.2	0.0014	18.8	1.3	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489548|ref|YP_447780.1|	-	3.5e-06	27.4	7.5	1.4e-05	25.4	7.7	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489548|ref|YP_447780.1|	-	4.7e-06	27.3	1.7	0.035	15.0	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489548|ref|YP_447780.1|	-	8.1e-06	25.4	17.7	0.0015	18.3	4.2	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489548|ref|YP_447780.1|	-	9.5e-06	26.1	9.5	3.2e-05	24.4	9.5	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489548|ref|YP_447780.1|	-	6.7e-05	22.9	9.8	0.071	13.2	1.3	2.9	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489548|ref|YP_447780.1|	-	0.00032	20.7	16.3	0.0072	16.4	4.1	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489548|ref|YP_447780.1|	-	0.00091	20.1	15.7	0.02	15.8	14.5	3.0	2	1	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|84489548|ref|YP_447780.1|	-	0.0048	17.3	13.1	0.035	14.6	4.1	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
NLRC4_HD2	PF17776.1	gi|84489548|ref|YP_447780.1|	-	0.071	13.7	0.0	0.18	12.3	0.0	1.7	1	0	0	1	1	1	0	NLRC4	helical	domain	HD2
Fer4_3	PF12798.7	gi|84489548|ref|YP_447780.1|	-	0.15	13.1	14.8	1.2	10.2	3.7	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84489548|ref|YP_447780.1|	-	0.29	11.3	17.7	0.14	12.3	4.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84489548|ref|YP_447780.1|	-	8.9	6.9	15.5	2.8	8.6	3.9	3.3	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
DUF1863	PF08937.11	gi|84489549|ref|YP_447781.1|	-	4.6e-25	88.4	1.2	4.6e-25	88.4	1.2	1.9	1	1	1	2	2	2	1	MTH538	TIR-like	domain	(DUF1863)
TIR_2	PF13676.6	gi|84489549|ref|YP_447781.1|	-	0.00019	22.0	0.0	0.00024	21.7	0.0	1.3	1	1	0	1	1	1	1	TIR	domain
PIN_12	PF16289.5	gi|84489549|ref|YP_447781.1|	-	0.00068	20.2	5.6	0.00082	19.9	5.6	1.1	1	0	0	1	1	1	1	PIN	domain
Strumpellin	PF10266.9	gi|84489549|ref|YP_447781.1|	-	0.043	11.5	0.1	0.047	11.4	0.1	1.1	1	0	0	1	1	1	0	Hereditary	spastic	paraplegia	protein	strumpellin
DUF262	PF03235.14	gi|84489549|ref|YP_447781.1|	-	0.056	13.6	4.5	0.29	11.3	0.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF262
Mntp	PF02659.15	gi|84489550|ref|YP_447782.1|	-	3.2e-51	173.1	20.9	6.4e-51	172.1	13.1	2.0	1	1	1	2	2	2	2	Putative	manganese	efflux	pump
DAGK_prokar	PF01219.19	gi|84489550|ref|YP_447782.1|	-	0.19	11.6	9.8	0.017	15.0	4.8	2.0	2	1	0	2	2	2	0	Prokaryotic	diacylglycerol	kinase
Big_3_5	PF16640.5	gi|84489552|ref|YP_447784.1|	-	8e-12	45.2	14.1	9.8e-07	28.9	0.8	4.1	2	1	1	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|84489552|ref|YP_447784.1|	-	2.6e-05	24.1	117.0	0.0003	20.7	49.4	5.3	2	1	2	4	4	4	2	Right	handed	beta	helix	region
NosD	PF05048.13	gi|84489552|ref|YP_447784.1|	-	0.0012	18.2	48.3	0.0012	18.2	48.3	4.6	1	1	1	4	4	4	1	Periplasmic	copper-binding	protein	(NosD)
SIT	PF15330.6	gi|84489552|ref|YP_447784.1|	-	0.024	15.1	0.9	0.058	13.9	0.9	1.6	1	0	0	1	1	1	0	SHP2-interacting	transmembrane	adaptor	protein,	SIT
DUF2547	PF10818.8	gi|84489552|ref|YP_447784.1|	-	0.62	11.0	2.8	3.2	8.7	2.8	2.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2547)
IL5	PF02025.15	gi|84489552|ref|YP_447784.1|	-	7.9	6.8	10.9	0.62	10.4	0.4	3.4	3	0	0	3	3	3	0	Interleukin	5
TIR-like	PF10137.9	gi|84489553|ref|YP_447785.1|	-	0.069	13.1	0.4	0.45	10.5	0.1	2.0	2	0	0	2	2	2	0	Predicted	nucleotide-binding	protein	containing	TIR-like	domain
CEP170_C	PF15308.6	gi|84489553|ref|YP_447785.1|	-	0.5	8.9	3.6	3.4	6.1	0.2	2.0	2	0	0	2	2	2	0	CEP170	C-terminus
Spore_Cse60	PF10957.8	gi|84489553|ref|YP_447785.1|	-	8.6	6.5	10.5	2.1	8.4	1.3	2.9	3	0	0	3	3	3	0	Sporulation	protein	Cse60
EF-hand_1	PF00036.32	gi|84489555|ref|YP_447787.1|	-	0.047	13.3	0.4	0.11	12.0	0.4	1.6	1	0	0	1	1	1	0	EF	hand
Shisa	PF13908.6	gi|84489555|ref|YP_447787.1|	-	0.26	11.5	2.4	2.3	8.4	0.0	2.2	2	0	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
MethyltransfD12	PF02086.15	gi|84489557|ref|YP_447789.1|	-	2e-15	57.2	2.4	2.6e-15	56.8	2.4	1.2	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
LANC_like	PF05147.13	gi|84489557|ref|YP_447789.1|	-	0.027	13.1	0.2	0.031	12.9	0.2	1.2	1	0	0	1	1	1	0	Lanthionine	synthetase	C-like	protein
MethyltransfD12	PF02086.15	gi|84489558|ref|YP_447790.1|	-	0.00036	20.3	3.4	0.0004	20.1	3.4	1.1	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
AATase	PF07247.12	gi|84489560|ref|YP_447792.1|	-	0.0033	16.0	1.1	0.0036	15.9	1.1	1.0	1	0	0	1	1	1	1	Alcohol	acetyltransferase
DUF1507	PF07408.11	gi|84489560|ref|YP_447792.1|	-	0.014	15.3	0.2	0.018	14.9	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1507)
B5	PF03484.15	gi|84489560|ref|YP_447792.1|	-	0.04	14.2	0.0	0.074	13.4	0.0	1.5	1	1	0	1	1	1	0	tRNA	synthetase	B5	domain
DUF1870	PF08965.10	gi|84489560|ref|YP_447792.1|	-	0.061	13.3	0.1	0.084	12.9	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1870)
ERp29	PF07749.12	gi|84489560|ref|YP_447792.1|	-	0.064	14.2	0.3	0.092	13.7	0.3	1.2	1	0	0	1	1	1	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
DUF1548	PF07579.11	gi|84489560|ref|YP_447792.1|	-	0.11	12.9	0.6	0.14	12.5	0.6	1.1	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1548)
AAA_14	PF13173.6	gi|84489561|ref|YP_447793.1|	-	8.7e-36	122.8	2.4	9.1e-36	122.8	0.2	2.2	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.6	gi|84489561|ref|YP_447793.1|	-	7.9e-06	26.0	0.3	1.4e-05	25.2	0.3	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
ATPase_2	PF01637.18	gi|84489561|ref|YP_447793.1|	-	1.6e-05	24.9	6.4	0.00064	19.7	0.5	3.3	1	1	2	3	3	3	1	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|84489561|ref|YP_447793.1|	-	0.0037	17.2	0.0	0.0075	16.2	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
MobB	PF03205.14	gi|84489561|ref|YP_447793.1|	-	0.017	15.0	0.0	0.043	13.7	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.15	gi|84489561|ref|YP_447793.1|	-	0.041	13.8	0.3	1.2	9.0	0.0	2.8	2	1	1	3	3	3	0	NTPase
FidL_like	PF15941.5	gi|84489561|ref|YP_447793.1|	-	0.089	13.3	0.3	24	5.5	0.0	3.0	2	0	0	2	2	2	0	FidL-like	putative	membrane	protein
T2SSE	PF00437.20	gi|84489561|ref|YP_447793.1|	-	0.14	11.2	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
GIDA	PF01134.22	gi|84489562|ref|YP_447794.1|	-	2.8e-09	36.6	0.2	4.8e-09	35.8	0.2	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.14	gi|84489562|ref|YP_447794.1|	-	1e-08	34.8	0.1	1.7e-08	34.1	0.1	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|84489562|ref|YP_447794.1|	-	4.9e-08	32.6	0.0	7.6e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|84489562|ref|YP_447794.1|	-	6.3e-06	25.3	0.8	0.14	10.9	0.1	3.1	2	1	0	3	3	3	3	Tryptophan	halogenase
HI0933_like	PF03486.14	gi|84489562|ref|YP_447794.1|	-	7.4e-05	21.6	0.1	0.00025	19.9	0.0	1.9	2	0	0	2	2	2	1	HI0933-like	protein
DAO	PF01266.24	gi|84489562|ref|YP_447794.1|	-	0.00015	21.5	0.0	0.2	11.2	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|84489562|ref|YP_447794.1|	-	0.0014	18.1	0.1	0.004	16.6	0.1	1.9	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|84489562|ref|YP_447794.1|	-	0.0096	15.0	0.0	0.081	12.0	0.0	2.3	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|84489562|ref|YP_447794.1|	-	0.013	14.8	0.1	0.05	12.9	0.0	2.0	2	0	0	2	2	2	0	Thi4	family
NAD_binding_8	PF13450.6	gi|84489562|ref|YP_447794.1|	-	0.013	15.7	0.0	0.035	14.3	0.0	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|84489562|ref|YP_447794.1|	-	0.04	13.0	0.0	0.089	11.9	0.0	1.5	2	0	0	2	2	2	0	FAD	binding	domain
Glucodextran_N	PF09137.11	gi|84489562|ref|YP_447794.1|	-	0.21	11.1	5.5	0.051	13.1	2.1	1.7	2	1	0	2	2	2	0	Glucodextranase,	domain	N
SAPIS-gp6	PF16722.5	gi|84489562|ref|YP_447794.1|	-	1.2	9.6	10.3	1.1	9.7	0.9	3.2	2	1	1	3	3	3	0	Pathogenicity	island	protein	gp6	in	Staphylococcus
zinc_ribbon_4	PF13717.6	gi|84489563|ref|YP_447795.1|	-	0.00036	20.4	0.3	0.55	10.2	0.0	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
HHH_3	PF12836.7	gi|84489563|ref|YP_447795.1|	-	0.0049	17.1	0.1	0.006	16.8	0.1	1.1	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
zf_UBZ	PF18439.1	gi|84489563|ref|YP_447795.1|	-	0.0052	16.3	0.9	1.6	8.4	0.1	2.4	2	0	0	2	2	2	2	Ubiquitin-Binding	Zinc	Finger
UPF0547	PF10571.9	gi|84489563|ref|YP_447795.1|	-	0.19	11.8	0.3	0.19	11.8	0.3	2.6	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
DUF983	PF06170.12	gi|84489563|ref|YP_447795.1|	-	3.2	8.2	4.4	21	5.6	1.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF983)
zf-C2H2	PF00096.26	gi|84489563|ref|YP_447795.1|	-	4.6	7.9	9.7	7.3	7.3	0.2	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
HypA	PF01155.19	gi|84489563|ref|YP_447795.1|	-	6	6.9	8.3	14	5.8	8.3	1.7	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-H2C2_2	PF13465.6	gi|84489563|ref|YP_447795.1|	-	9.8	6.8	9.3	3	8.4	0.2	2.5	2	1	0	2	2	2	0	Zinc-finger	double	domain
CBAH	PF02275.18	gi|84489564|ref|YP_447796.1|	-	7.8e-103	344.4	5.3	8.7e-103	344.3	5.3	1.0	1	0	0	1	1	1	1	Linear	amide	C-N	hydrolases,	choloylglycine	hydrolase	family
AAT	PF03417.16	gi|84489564|ref|YP_447796.1|	-	0.0016	18.2	0.3	0.007	16.1	0.0	1.9	2	0	0	2	2	2	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
URO-D	PF01208.17	gi|84489565|ref|YP_447797.1|	-	7.7e-74	248.9	0.0	9.1e-74	248.7	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
ALAD	PF00490.21	gi|84489565|ref|YP_447797.1|	-	0.066	12.4	0.0	0.4	9.8	0.0	2.0	2	0	0	2	2	2	0	Delta-aminolevulinic	acid	dehydratase
PEP_mutase	PF13714.6	gi|84489565|ref|YP_447797.1|	-	0.09	12.2	0.0	0.18	11.3	0.0	1.5	1	0	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
CarboxypepD_reg	PF13620.6	gi|84489566|ref|YP_447798.1|	-	5.5e-83	273.3	135.7	2.4e-10	40.5	0.4	17.9	16	1	1	17	17	16	13	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|84489566|ref|YP_447798.1|	-	1.2e-69	230.5	295.8	1.4e-06	28.4	9.5	25.5	24	2	1	25	25	24	20	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|84489566|ref|YP_447798.1|	-	3.5e-29	101.0	242.7	5.4e-07	29.8	2.6	23.2	17	5	5	24	24	22	14	Invasin,	domain	3
Big_1	PF02369.16	gi|84489566|ref|YP_447798.1|	-	8e-29	99.4	226.3	1.3e-06	28.3	0.5	23.4	23	2	1	24	24	23	13	Bacterial	Ig-like	domain	(group	1)
CarbopepD_reg_2	PF13715.6	gi|84489566|ref|YP_447798.1|	-	4.7e-23	81.0	137.2	4.7e-05	23.3	1.7	17.9	17	0	0	17	17	16	11	CarboxypepD_reg-like	domain
CooC_C	PF15976.5	gi|84489566|ref|YP_447798.1|	-	1.2e-08	34.9	53.4	0.029	14.4	0.1	14.0	14	0	0	14	14	14	6	CS1-pili	formation	C-terminal
MG2	PF01835.19	gi|84489566|ref|YP_447798.1|	-	8.3e-05	23.0	18.9	9.9	6.7	0.1	10.2	9	0	0	9	9	9	2	MG2	domain
MG4	PF17789.1	gi|84489566|ref|YP_447798.1|	-	0.00035	20.6	0.1	0.00035	20.6	0.1	18.2	19	0	0	19	19	19	5	Macroglobulin	domain	MG4
Filamin	PF00630.19	gi|84489566|ref|YP_447798.1|	-	0.0018	19.1	0.3	0.0018	19.1	0.3	14.2	11	4	2	13	13	12	4	Filamin/ABP280	repeat
Dioxygenase_C	PF00775.21	gi|84489566|ref|YP_447798.1|	-	0.0066	15.9	15.0	1.6	8.2	0.0	9.5	11	1	0	11	11	11	1	Dioxygenase
TraI_2	PF07514.11	gi|84489566|ref|YP_447798.1|	-	0.043	12.8	0.3	3.1	6.6	0.1	2.4	2	0	0	2	2	2	0	Putative	helicase
RNase_HII	PF01351.18	gi|84489566|ref|YP_447798.1|	-	2.2	8.1	11.8	1.3	8.8	0.5	4.1	3	0	0	3	3	3	0	Ribonuclease	HII
CCG	PF02754.16	gi|84489567|ref|YP_447799.1|	-	5.5e-19	68.2	6.6	8.3e-13	48.4	0.3	2.8	2	1	0	2	2	2	2	Cysteine-rich	domain
DUF2757	PF10955.8	gi|84489567|ref|YP_447799.1|	-	0.046	14.0	0.4	8.5	6.7	0.1	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2757)
DUF4948	PF16306.5	gi|84489567|ref|YP_447799.1|	-	0.046	13.5	0.0	0.066	13.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4948)
zf-C2H2_9	PF16293.5	gi|84489567|ref|YP_447799.1|	-	0.18	11.7	0.8	19	5.2	0.0	3.1	3	0	0	3	3	3	0	C2H2	type	zinc-finger	(1	copy)
NAPRTase	PF04095.16	gi|84489568|ref|YP_447800.1|	-	1.7e-41	142.4	0.1	2.2e-41	142.1	0.1	1.1	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
DUF5598	PF18127.1	gi|84489568|ref|YP_447800.1|	-	2.9e-38	130.2	1.4	5.2e-38	129.4	0.6	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5598)
Big_3_5	PF16640.5	gi|84489569|ref|YP_447801.1|	-	2.6e-76	251.9	107.5	2.1e-10	40.7	3.0	10.6	10	1	1	11	11	11	9	Bacterial	Ig-like	domain	(group	3)
Izumo-Ig	PF16706.5	gi|84489569|ref|YP_447801.1|	-	0.011	15.8	18.0	73	3.5	0.1	8.4	8	0	0	8	8	8	0	Izumo-like	Immunoglobulin	domain
Apo-VLDL-II	PF05418.11	gi|84489569|ref|YP_447801.1|	-	0.57	10.8	13.0	86	3.8	0.1	5.5	5	0	0	5	5	5	0	Apovitellenin	I	(Apo-VLDL-II)
Imm44	PF15571.6	gi|84489569|ref|YP_447801.1|	-	0.86	9.9	16.3	71	3.7	0.0	6.3	7	0	0	7	7	7	0	Immunity	protein	44
Baculo_p24	PF05073.12	gi|84489570|ref|YP_447802.1|	-	0.0014	18.5	3.9	0.0019	18.0	3.9	1.3	1	1	0	1	1	1	1	Baculovirus	P24	capsid	protein
DUF3427	PF11907.8	gi|84489571|ref|YP_447803.1|	-	2.5e-84	282.9	18.6	2.5e-84	282.9	18.6	3.3	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF3427)
ResIII	PF04851.15	gi|84489571|ref|YP_447803.1|	-	5.1e-33	114.5	0.2	1.4e-32	113.1	0.2	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
PLDc_2	PF13091.6	gi|84489571|ref|YP_447803.1|	-	3.1e-15	56.2	0.3	6.7e-15	55.2	0.3	1.6	1	0	0	1	1	1	1	PLD-like	domain
SWI2_SNF2	PF18766.1	gi|84489571|ref|YP_447803.1|	-	2.3e-11	43.8	0.1	5.4e-11	42.6	0.1	1.6	1	0	0	1	1	1	1	SWI2/SNF2	ATPase
Helicase_C	PF00271.31	gi|84489571|ref|YP_447803.1|	-	3.7e-11	43.3	0.4	3.7e-11	43.3	0.4	3.1	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|84489571|ref|YP_447803.1|	-	8.6e-06	25.6	0.0	2e-05	24.4	0.0	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_24	PF13479.6	gi|84489571|ref|YP_447803.1|	-	0.014	15.1	0.0	0.037	13.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Fer4_15	PF13459.6	gi|84489572|ref|YP_447804.1|	-	2.6e-18	66.5	6.7	2.9e-18	66.4	6.7	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|84489572|ref|YP_447804.1|	-	6.9e-08	32.9	4.1	9.2e-08	32.5	4.1	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4	PF00037.27	gi|84489572|ref|YP_447804.1|	-	0.0005	19.8	2.1	0.0005	19.8	2.1	2.3	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84489572|ref|YP_447804.1|	-	0.00092	19.3	1.6	0.0017	18.4	1.6	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489572|ref|YP_447804.1|	-	0.0051	16.8	1.3	0.0051	16.8	1.3	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|84489572|ref|YP_447804.1|	-	0.023	14.8	0.8	0.03	14.4	0.5	1.6	1	1	1	2	2	2	0	Divergent	4Fe-4S	mono-cluster
Fer4_7	PF12838.7	gi|84489572|ref|YP_447804.1|	-	0.065	13.8	0.9	0.065	13.8	0.9	2.1	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489572|ref|YP_447804.1|	-	0.068	13.3	1.6	0.068	13.3	1.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489572|ref|YP_447804.1|	-	0.24	11.5	6.3	1.6	8.9	1.8	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
CBFD_NFYB_HMF	PF00808.23	gi|84489573|ref|YP_447805.1|	-	6.7e-17	61.5	0.1	7.3e-17	61.4	0.1	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
CENP-T_C	PF15511.6	gi|84489573|ref|YP_447805.1|	-	7.2e-09	35.7	0.0	7.3e-09	35.7	0.0	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
CENP-S	PF15630.6	gi|84489573|ref|YP_447805.1|	-	7.2e-07	29.5	0.0	8.1e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	CENP-S	protein
Histone	PF00125.24	gi|84489573|ref|YP_447805.1|	-	1.9e-05	25.0	0.0	2e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
TFIID-31kDa	PF02291.15	gi|84489573|ref|YP_447805.1|	-	4.2e-05	23.6	0.0	4.6e-05	23.5	0.0	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
TAF	PF02969.17	gi|84489573|ref|YP_447805.1|	-	0.00032	20.8	0.1	0.00035	20.7	0.1	1.0	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
Bromo_TP	PF07524.13	gi|84489573|ref|YP_447805.1|	-	0.0028	17.6	0.0	0.003	17.5	0.0	1.1	1	0	0	1	1	1	1	Bromodomain	associated
DUF5335	PF17269.2	gi|84489573|ref|YP_447805.1|	-	0.028	14.3	0.0	0.029	14.2	0.0	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5335)
TFIID_20kDa	PF03847.13	gi|84489573|ref|YP_447805.1|	-	0.034	14.6	0.0	0.036	14.6	0.0	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	TFIID	subunit	A
Pyrid_ox_like	PF16242.5	gi|84489574|ref|YP_447806.1|	-	2.2e-05	24.1	0.0	2.4e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase	like
Putative_PNPOx	PF01243.20	gi|84489574|ref|YP_447806.1|	-	5.8e-05	23.2	0.0	7.9e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyridox_ox_2	PF12900.7	gi|84489574|ref|YP_447806.1|	-	0.047	13.7	0.0	0.086	12.8	0.0	1.6	1	1	0	1	1	1	0	Pyridoxamine	5'-phosphate	oxidase
DrsE_2	PF13686.6	gi|84489574|ref|YP_447806.1|	-	0.077	12.9	0.0	0.1	12.5	0.0	1.2	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
GxGYxYP_C	PF14323.6	gi|84489574|ref|YP_447806.1|	-	0.084	12.7	0.0	0.098	12.5	0.0	1.1	1	0	0	1	1	1	0	GxGYxYP	putative	glycoside	hydrolase	C-terminal	domain
SpoIIM	PF01944.17	gi|84489576|ref|YP_447808.1|	-	3.4e-22	79.2	13.7	4.3e-22	78.8	13.7	1.1	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
zf-ribbon_3	PF13248.6	gi|84489577|ref|YP_447809.1|	-	0.0043	16.4	2.0	0.041	13.3	2.2	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|84489577|ref|YP_447809.1|	-	0.035	13.8	1.6	0.075	12.8	1.6	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.7	gi|84489577|ref|YP_447809.1|	-	0.15	12.1	0.6	0.29	11.2	0.6	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
Ureide_permease	PF07168.11	gi|84489577|ref|YP_447809.1|	-	3.4	6.3	6.7	5.2	5.7	0.3	2.3	2	0	0	2	2	2	0	Ureide	permease
URO-D	PF01208.17	gi|84489578|ref|YP_447810.1|	-	1.4e-67	228.3	0.0	1.7e-67	228.0	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
PMBR	PF09373.10	gi|84489579|ref|YP_447811.1|	-	1.2e-26	91.6	6.2	1.4e-08	34.5	0.1	4.4	3	0	0	3	3	3	3	Pseudomurein-binding	repeat
Transglut_core	PF01841.19	gi|84489579|ref|YP_447811.1|	-	6.5e-20	71.7	0.1	1.9e-19	70.2	0.1	1.9	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Peptidase_C71	PF12386.8	gi|84489579|ref|YP_447811.1|	-	0.0013	18.4	0.8	0.0013	18.4	0.8	2.9	2	0	0	2	2	2	1	Pseudomurein	endo-isopeptidase	Pei
PepSY	PF03413.19	gi|84489580|ref|YP_447812.1|	-	1.7e-21	76.6	10.6	2.8e-06	27.8	0.5	3.5	3	0	0	3	3	3	3	Peptidase	propeptide	and	YPEB	domain
4_1_CTD	PF05902.13	gi|84489580|ref|YP_447812.1|	-	9.2e-05	22.5	0.0	9.7	6.3	0.0	4.1	3	2	0	3	3	3	2	4.1	protein	C-terminal	domain	(CTD)
PfaD_N	PF18328.1	gi|84489580|ref|YP_447812.1|	-	0.0015	18.4	4.1	17	5.4	0.0	4.3	4	0	0	4	4	4	3	Fatty	acid	synthase	subunit	PfaD	N-terminal	domain
DUF5300	PF17224.3	gi|84489580|ref|YP_447812.1|	-	0.0024	18.1	2.9	22	5.4	0.1	4.1	3	1	0	3	3	3	3	Domain	of	unknown	function	(DUF5300)
Wzt_C	PF14524.6	gi|84489580|ref|YP_447812.1|	-	0.004	17.2	8.4	6.8	6.7	0.3	4.2	1	1	2	3	3	3	3	Wzt	C-terminal	domain
DUF1657	PF07870.11	gi|84489580|ref|YP_447812.1|	-	0.039	13.8	0.3	62	3.6	0.0	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1657)
Big_3_5	PF16640.5	gi|84489581|ref|YP_447813.1|	-	1e-41	141.0	100.7	1.8e-07	31.3	11.3	9.0	9	0	0	9	9	9	7	Bacterial	Ig-like	domain	(group	3)
Peptidase_C1	PF00112.23	gi|84489581|ref|YP_447813.1|	-	1.1e-22	81.2	7.6	2.3e-22	80.2	4.2	3.5	2	0	0	2	2	2	1	Papain	family	cysteine	protease
Big_6	PF17936.1	gi|84489581|ref|YP_447813.1|	-	5.9e-10	39.3	46.5	0.0066	16.7	4.0	7.6	8	0	0	8	8	8	4	Bacterial	Ig	domain
TcfC	PF16967.5	gi|84489581|ref|YP_447813.1|	-	3.4e-08	32.8	22.9	0.27	10.7	0.2	7.0	6	1	1	7	7	7	5	E-set	like	domain
bMG3	PF11974.8	gi|84489581|ref|YP_447813.1|	-	0.00046	20.2	16.4	1.1	9.3	1.7	5.0	1	1	3	4	4	4	4	Bacterial	alpha-2-macroglobulin	MG3	domain
Peptidase_C39	PF03412.15	gi|84489581|ref|YP_447813.1|	-	0.0045	16.8	0.0	0.013	15.3	0.0	1.7	1	0	0	1	1	1	1	Peptidase	C39	family
ToxB_N	PF18224.1	gi|84489581|ref|YP_447813.1|	-	0.0087	16.0	22.1	3.6	7.6	0.5	6.2	5	0	0	5	5	5	4	ToxB	N-terminal	domain
FMN_red	PF03358.15	gi|84489583|ref|YP_447815.1|	-	2e-14	53.6	0.0	2.6e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489583|ref|YP_447815.1|	-	0.001	18.8	0.0	0.0013	18.5	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Tyr_Deacylase	PF02580.16	gi|84489585|ref|YP_447817.1|	-	7.2e-55	185.5	0.1	8e-55	185.3	0.1	1.0	1	0	0	1	1	1	1	D-Tyr-tRNA(Tyr)	deacylase
DUF998	PF06197.13	gi|84489587|ref|YP_447819.1|	-	6.2e-09	35.7	0.0	9.8e-09	35.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Tom6	PF17112.5	gi|84489587|ref|YP_447819.1|	-	0.055	13.0	0.4	0.055	13.0	0.4	2.8	3	0	0	3	3	3	0	Mitochondrial	import	receptor	subunit	Tom6,	fungal
DUF4231	PF14015.6	gi|84489587|ref|YP_447819.1|	-	0.2	12.1	0.1	0.2	12.1	0.1	3.3	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF4231)
DUF3784	PF12650.7	gi|84489587|ref|YP_447819.1|	-	3.8	7.8	32.1	5.8	7.2	5.1	4.0	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF3784)
RICH	PF05062.12	gi|84489588|ref|YP_447820.1|	-	0.0003	21.1	0.5	0.00048	20.4	0.5	1.3	1	0	0	1	1	1	1	RICH	domain
zinc-ribbon_6	PF10005.9	gi|84489589|ref|YP_447821.1|	-	0.0002	22.0	0.4	0.00054	20.6	0.4	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|84489589|ref|YP_447821.1|	-	0.00096	19.9	1.5	0.0019	18.9	0.3	2.2	2	0	0	2	2	2	1	zinc-ribbon	family
zf-ribbon_3	PF13248.6	gi|84489589|ref|YP_447821.1|	-	0.0069	15.8	0.9	0.014	14.8	0.9	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84489589|ref|YP_447821.1|	-	0.0084	16.1	0.6	0.018	15.0	0.6	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|84489589|ref|YP_447821.1|	-	0.0099	15.6	3.5	0.029	14.1	3.5	1.9	1	0	0	1	1	1	1	zinc-ribbon	domain
Cript	PF10235.9	gi|84489589|ref|YP_447821.1|	-	0.026	15.1	1.2	0.074	13.6	1.2	1.8	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
HypA	PF01155.19	gi|84489589|ref|YP_447821.1|	-	0.081	12.9	0.3	0.23	11.5	0.1	1.8	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|84489590|ref|YP_447822.1|	-	0.022	14.8	0.2	0.052	13.6	0.2	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|84489590|ref|YP_447822.1|	-	0.063	12.8	2.7	1.7	8.2	0.0	3.0	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-RanBP	PF00641.18	gi|84489590|ref|YP_447822.1|	-	0.11	11.8	0.4	0.23	10.8	0.4	1.5	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
Glycohydro_20b2	PF14845.6	gi|84489590|ref|YP_447822.1|	-	0.12	13.0	0.0	0.85	10.3	0.0	2.2	1	1	0	1	1	1	0	beta-acetyl	hexosaminidase	like
zf-ribbon_3	PF13248.6	gi|84489590|ref|YP_447822.1|	-	0.15	11.5	0.9	1.3	8.5	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Erf4	PF10256.9	gi|84489590|ref|YP_447822.1|	-	0.47	10.6	6.4	6.6	6.9	0.4	3.2	1	1	1	3	3	3	0	Golgin	subfamily	A	member	7/ERF4	family
Flavodoxin_1	PF00258.25	gi|84489591|ref|YP_447823.1|	-	1.5e-10	41.4	0.0	2.7e-10	40.6	0.0	1.4	1	0	0	1	1	1	1	Flavodoxin
Lactamase_B	PF00753.27	gi|84489591|ref|YP_447823.1|	-	3e-05	24.1	0.0	4.3e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Desulfoferrodox	PF01880.18	gi|84489592|ref|YP_447824.1|	-	4.9e-19	68.7	0.0	7.1e-19	68.2	0.0	1.2	1	0	0	1	1	1	1	Desulfoferrodoxin
Rubrerythrin	PF02915.17	gi|84489593|ref|YP_447825.1|	-	9.9e-31	107.0	5.1	1.2e-30	106.7	5.1	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|84489593|ref|YP_447825.1|	-	4e-09	36.5	1.7	5.1e-09	36.2	1.7	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
Orbi_VP3	PF01700.16	gi|84489593|ref|YP_447825.1|	-	0.0089	14.0	0.0	0.01	13.8	0.0	1.0	1	0	0	1	1	1	1	Orbivirus	VP3	(T2)	protein
zinc_ribbon_11	PF11682.8	gi|84489593|ref|YP_447825.1|	-	0.024	14.7	0.3	0.05	13.6	0.3	1.5	1	0	0	1	1	1	0	Probable	zinc-ribbon
HypA	PF01155.19	gi|84489593|ref|YP_447825.1|	-	0.04	13.9	0.0	0.075	13.1	0.0	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
ADK_lid	PF05191.14	gi|84489593|ref|YP_447825.1|	-	0.095	12.7	4.0	0.21	11.6	4.0	1.6	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-BED	PF02892.15	gi|84489593|ref|YP_447825.1|	-	0.12	12.4	1.6	0.16	12.0	0.1	1.8	2	0	0	2	2	2	0	BED	zinc	finger
Ferritin_2	PF13668.6	gi|84489593|ref|YP_447825.1|	-	0.16	12.1	1.4	0.23	11.6	1.4	1.2	1	0	0	1	1	1	0	Ferritin-like	domain
Prim_Zn_Ribbon	PF08273.12	gi|84489593|ref|YP_447825.1|	-	0.33	11.3	0.4	0.33	11.3	0.4	2.2	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zinc_ribbon_10	PF10058.9	gi|84489593|ref|YP_447825.1|	-	0.47	10.2	0.1	0.47	10.2	0.1	2.2	3	0	0	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
DUF2070	PF09843.9	gi|84489594|ref|YP_447826.1|	-	5e-173	576.4	14.6	5.7e-173	576.2	14.6	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Borrelia_P13	PF05628.12	gi|84489594|ref|YP_447826.1|	-	9.5	6.2	10.6	9.1	6.2	4.8	2.9	2	1	1	3	3	3	0	Borrelia	membrane	protein	P13
Fumerase_C	PF05683.12	gi|84489595|ref|YP_447827.1|	-	8.8e-45	152.6	0.0	9.8e-45	152.4	0.0	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
PsbP	PF01789.16	gi|84489596|ref|YP_447828.1|	-	0.00091	19.4	0.3	0.0016	18.5	0.3	1.5	1	0	0	1	1	1	1	PsbP
HTH_19	PF12844.7	gi|84489596|ref|YP_447828.1|	-	0.14	12.2	0.0	8.2	6.5	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
FliD_C	PF07195.12	gi|84489597|ref|YP_447829.1|	-	0.00018	21.1	3.6	0.00018	21.0	3.6	1.0	1	0	0	1	1	1	1	Flagellar	hook-associated	protein	2	C-terminus
End3	PF12761.7	gi|84489597|ref|YP_447829.1|	-	0.0082	16.3	1.7	0.0094	16.1	1.7	1.1	1	0	0	1	1	1	1	Actin	cytoskeleton-regulatory	complex	protein	END3
TMCO5	PF14992.6	gi|84489597|ref|YP_447829.1|	-	0.0086	15.7	8.7	0.0096	15.5	8.7	1.0	1	0	0	1	1	1	1	TMCO5	family
Tektin	PF03148.14	gi|84489597|ref|YP_447829.1|	-	0.016	14.0	6.7	0.023	13.4	6.7	1.3	1	1	0	1	1	1	0	Tektin	family
CC2-LZ	PF16516.5	gi|84489597|ref|YP_447829.1|	-	0.043	14.2	1.6	0.043	14.2	1.6	1.8	1	1	1	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
FAM76	PF16046.5	gi|84489597|ref|YP_447829.1|	-	0.14	11.5	2.5	0.16	11.3	2.5	1.2	1	0	0	1	1	1	0	FAM76	protein
DUF1664	PF07889.12	gi|84489597|ref|YP_447829.1|	-	0.2	11.7	3.9	0.23	11.5	3.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Csm1_N	PF18504.1	gi|84489597|ref|YP_447829.1|	-	0.24	11.7	4.7	0.24	11.7	3.3	1.8	1	1	1	2	2	2	0	Csm1	N-terminal	domain
Fib_alpha	PF08702.10	gi|84489597|ref|YP_447829.1|	-	0.31	11.2	5.5	0.38	10.9	5.5	1.1	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF4430	PF14478.6	gi|84489598|ref|YP_447830.1|	-	0.0063	17.1	0.1	0.014	16.0	0.0	1.7	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4430)
AAA_12	PF13087.6	gi|84489599|ref|YP_447831.1|	-	3e-42	144.5	7.1	3e-42	144.5	7.1	2.8	3	0	0	3	3	3	1	AAA	domain
AAA_11	PF13086.6	gi|84489599|ref|YP_447831.1|	-	5.9e-42	144.3	4.0	2e-41	142.6	3.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|84489599|ref|YP_447831.1|	-	6e-12	46.1	1.1	1.3e-10	41.8	0.6	3.0	2	2	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|84489599|ref|YP_447831.1|	-	7.8e-12	45.3	0.0	2.7e-08	33.7	0.0	2.7	3	0	0	3	3	3	2	AAA	domain
Viral_helicase1	PF01443.18	gi|84489599|ref|YP_447831.1|	-	1.1e-09	38.3	0.4	0.008	15.9	0.0	3.4	2	1	0	3	3	3	3	Viral	(Superfamily	1)	RNA	helicase
Helicase_RecD	PF05127.14	gi|84489599|ref|YP_447831.1|	-	3.2e-05	23.8	0.4	0.0034	17.2	0.0	2.5	1	1	0	2	2	2	1	Helicase
Flavi_DEAD	PF07652.14	gi|84489599|ref|YP_447831.1|	-	0.00038	20.4	0.2	0.0032	17.5	0.0	2.5	3	0	0	3	3	3	1	Flavivirus	DEAD	domain
UvrD_C_2	PF13538.6	gi|84489599|ref|YP_447831.1|	-	0.0023	17.7	0.0	0.0058	16.4	0.0	1.8	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
PhoH	PF02562.16	gi|84489599|ref|YP_447831.1|	-	0.0034	16.9	0.9	0.045	13.2	0.0	2.7	3	0	0	3	3	3	1	PhoH-like	protein
ResIII	PF04851.15	gi|84489599|ref|YP_447831.1|	-	0.0041	17.2	5.6	0.0041	17.2	5.6	3.2	1	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
IstB_IS21	PF01695.17	gi|84489599|ref|YP_447831.1|	-	0.0052	16.5	0.2	0.11	12.3	0.0	2.9	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|84489599|ref|YP_447831.1|	-	0.012	16.0	0.0	0.051	14.0	0.0	2.2	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zot	PF05707.12	gi|84489599|ref|YP_447831.1|	-	0.018	14.7	0.0	0.04	13.6	0.0	1.6	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_22	PF13401.6	gi|84489599|ref|YP_447831.1|	-	0.025	14.9	0.1	0.18	12.1	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
DUF2075	PF09848.9	gi|84489599|ref|YP_447831.1|	-	0.061	12.6	5.1	0.024	13.9	1.5	2.2	2	1	1	3	3	3	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_18	PF13238.6	gi|84489599|ref|YP_447831.1|	-	0.092	13.3	1.5	0.74	10.4	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|84489599|ref|YP_447831.1|	-	0.092	11.8	3.4	0.045	12.8	0.2	2.0	2	1	1	3	3	3	0	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.27	gi|84489599|ref|YP_447831.1|	-	3.4	8.2	8.7	1.8	9.1	4.1	2.9	3	1	0	3	3	3	0	ABC	transporter
KASH_CCD	PF14662.6	gi|84489600|ref|YP_447832.1|	-	0.00069	19.5	16.6	0.00072	19.4	16.6	1.0	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155	or	KASH
ZapB	PF06005.12	gi|84489600|ref|YP_447832.1|	-	0.0026	18.2	12.4	0.0026	18.2	12.4	2.0	1	1	1	2	2	2	1	Cell	division	protein	ZapB
TSC22	PF01166.18	gi|84489600|ref|YP_447832.1|	-	0.0049	17.1	15.1	0.023	15.0	7.0	2.8	1	1	2	3	3	3	1	TSC-22/dip/bun	family
Filament	PF00038.21	gi|84489600|ref|YP_447832.1|	-	0.0061	16.2	9.8	0.0066	16.1	9.8	1.1	1	0	0	1	1	1	1	Intermediate	filament	protein
GIT_CC	PF16559.5	gi|84489600|ref|YP_447832.1|	-	0.0083	16.0	4.6	0.0083	16.0	4.6	2.1	1	1	1	2	2	2	1	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
Tho2	PF11262.8	gi|84489600|ref|YP_447832.1|	-	0.012	14.9	3.0	0.012	14.9	3.0	1.5	1	1	1	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
Uso1_p115_C	PF04871.13	gi|84489600|ref|YP_447832.1|	-	0.015	15.6	12.4	0.018	15.4	12.4	1.1	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
CK2S	PF15011.6	gi|84489600|ref|YP_447832.1|	-	0.026	14.4	3.1	0.027	14.3	3.1	1.1	1	0	0	1	1	1	0	Casein	Kinase	2	substrate
Tropomyosin_1	PF12718.7	gi|84489600|ref|YP_447832.1|	-	0.028	14.6	13.5	0.037	14.2	13.5	1.2	1	0	0	1	1	1	0	Tropomyosin	like
DUF3450	PF11932.8	gi|84489600|ref|YP_447832.1|	-	0.033	13.5	9.2	0.033	13.5	9.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
bZIP_1	PF00170.21	gi|84489600|ref|YP_447832.1|	-	0.036	14.1	21.3	0.21	11.7	3.6	2.4	1	1	2	3	3	3	0	bZIP	transcription	factor
CALCOCO1	PF07888.11	gi|84489600|ref|YP_447832.1|	-	0.045	12.6	9.0	0.048	12.5	9.0	1.0	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
ADIP	PF11559.8	gi|84489600|ref|YP_447832.1|	-	0.045	13.8	13.0	0.055	13.6	13.0	1.2	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Seryl_tRNA_N	PF02403.22	gi|84489600|ref|YP_447832.1|	-	0.05	13.8	15.7	0.055	13.7	15.7	1.1	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF4164	PF13747.6	gi|84489600|ref|YP_447832.1|	-	0.057	13.7	4.8	0.2	11.9	0.7	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4164)
DUF641	PF04859.12	gi|84489600|ref|YP_447832.1|	-	0.062	13.6	7.9	0.073	13.4	7.9	1.1	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
PI3K_P85_iSH2	PF16454.5	gi|84489600|ref|YP_447832.1|	-	0.16	11.6	13.4	0.18	11.4	13.4	1.1	1	0	0	1	1	1	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
Csm1_N	PF18504.1	gi|84489600|ref|YP_447832.1|	-	0.16	12.3	14.0	0.26	11.7	5.8	2.1	1	1	1	2	2	2	0	Csm1	N-terminal	domain
TMF_DNA_bd	PF12329.8	gi|84489600|ref|YP_447832.1|	-	0.17	11.9	18.6	0.19	11.8	15.0	2.1	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
APG6_N	PF17675.1	gi|84489600|ref|YP_447832.1|	-	0.21	12.1	15.3	0.24	11.9	15.3	1.1	1	0	0	1	1	1	0	Apg6	coiled-coil	region
betaPIX_CC	PF16523.5	gi|84489600|ref|YP_447832.1|	-	0.23	11.3	11.6	0.87	9.5	2.3	2.1	1	1	1	2	2	2	0	betaPIX	coiled	coil
HAUS6_N	PF14661.6	gi|84489600|ref|YP_447832.1|	-	0.25	10.9	7.0	0.25	10.9	7.0	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Rootletin	PF15035.6	gi|84489600|ref|YP_447832.1|	-	0.31	11.1	12.0	1.6	8.7	12.0	1.8	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
YabA	PF06156.13	gi|84489600|ref|YP_447832.1|	-	0.4	11.3	14.2	0.56	10.9	14.2	1.3	1	0	0	1	1	1	0	Initiation	control	protein	YabA
Sec20	PF03908.13	gi|84489600|ref|YP_447832.1|	-	0.42	10.6	4.8	3.2	7.7	4.5	1.9	1	1	0	1	1	1	0	Sec20
Jnk-SapK_ap_N	PF09744.9	gi|84489600|ref|YP_447832.1|	-	0.48	10.6	12.7	0.72	10.1	12.7	1.4	1	1	0	1	1	1	0	JNK_SAPK-associated	protein-1
DUF4140	PF13600.6	gi|84489600|ref|YP_447832.1|	-	0.51	10.8	3.0	0.75	10.3	2.9	1.5	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
MCC-bdg_PDZ	PF10506.9	gi|84489600|ref|YP_447832.1|	-	0.53	10.3	9.1	0.38	10.8	1.5	2.1	2	0	0	2	2	2	0	PDZ	domain	of	MCC-2	bdg	protein	for	Usher	syndrome
DUF724	PF05266.14	gi|84489600|ref|YP_447832.1|	-	0.56	10.0	11.0	0.66	9.8	11.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
HDV_ag	PF01517.18	gi|84489600|ref|YP_447832.1|	-	0.57	9.9	4.8	0.39	10.5	3.5	1.5	1	1	1	2	2	2	0	Hepatitis	delta	virus	delta	antigen
Wtap	PF17098.5	gi|84489600|ref|YP_447832.1|	-	0.63	10.0	11.0	1.1	9.2	11.0	1.4	1	1	0	1	1	1	0	WTAP/Mum2p	family
Chibby	PF14645.6	gi|84489600|ref|YP_447832.1|	-	0.74	10.2	14.3	0.39	11.2	5.0	2.3	1	1	1	2	2	2	0	Chibby	family
Fzo_mitofusin	PF04799.13	gi|84489600|ref|YP_447832.1|	-	0.79	9.3	9.8	0.23	11.0	4.6	1.8	1	1	1	2	2	2	0	fzo-like	conserved	region
LMBR1	PF04791.16	gi|84489600|ref|YP_447832.1|	-	0.8	8.5	4.4	0.86	8.4	4.4	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
DivIC	PF04977.15	gi|84489600|ref|YP_447832.1|	-	2.6	7.9	17.2	0.99	9.2	8.2	2.6	1	1	2	3	3	3	0	Septum	formation	initiator
SIKE	PF05769.11	gi|84489600|ref|YP_447832.1|	-	2.7	7.9	15.3	1.1	9.2	6.5	2.1	1	1	1	2	2	2	0	SIKE	family
Ax_dynein_light	PF10211.9	gi|84489600|ref|YP_447832.1|	-	2.8	7.9	14.3	7.6	6.4	14.3	1.7	1	1	0	1	1	1	0	Axonemal	dynein	light	chain
AAA_lid_9	PF17871.1	gi|84489600|ref|YP_447832.1|	-	5.1	7.1	8.9	3.4	7.6	6.7	1.8	1	1	1	2	2	2	0	AAA	lid	domain
OmpH	PF03938.14	gi|84489600|ref|YP_447832.1|	-	6.1	7.2	14.8	6.5	7.1	14.8	1.0	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
XhlA	PF10779.9	gi|84489600|ref|YP_447832.1|	-	6.8	7.0	19.6	0.89	9.8	10.1	2.3	1	1	2	3	3	3	0	Haemolysin	XhlA
bZIP_2	PF07716.15	gi|84489600|ref|YP_447832.1|	-	7.3	6.8	17.7	0.53	10.4	6.9	2.3	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Nitroreductase	PF00881.24	gi|84489601|ref|YP_447833.1|	-	3.6e-26	92.2	0.0	4.5e-26	91.9	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|84489601|ref|YP_447833.1|	-	0.0014	18.2	0.1	0.0088	15.6	0.0	2.1	1	1	0	2	2	2	1	Putative	TM	nitroreductase
DUF1724	PF08350.10	gi|84489602|ref|YP_447834.1|	-	1.2e-05	25.4	3.8	5e-05	23.3	3.8	2.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_20	PF12840.7	gi|84489602|ref|YP_447834.1|	-	0.17	12.0	0.0	0.41	10.7	0.0	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
LRR_4	PF12799.7	gi|84489602|ref|YP_447834.1|	-	0.42	11.1	9.8	0.71	10.4	0.1	3.8	3	1	1	4	4	4	0	Leucine	Rich	repeats	(2	copies)
HTH_34	PF13601.6	gi|84489603|ref|YP_447835.1|	-	0.00012	22.1	0.5	0.00032	20.8	0.5	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|84489603|ref|YP_447835.1|	-	0.00015	21.6	0.2	0.0003	20.6	0.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF1724	PF08350.10	gi|84489603|ref|YP_447835.1|	-	0.00015	21.8	0.2	0.0013	18.8	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1724)
TrmB	PF01978.19	gi|84489603|ref|YP_447835.1|	-	0.0003	20.6	0.2	0.00087	19.1	0.2	1.8	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|84489603|ref|YP_447835.1|	-	0.00059	19.7	0.2	0.0022	17.9	0.1	2.0	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.6	gi|84489603|ref|YP_447835.1|	-	0.0018	18.3	4.4	0.0059	16.6	4.4	2.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_20	PF12840.7	gi|84489603|ref|YP_447835.1|	-	0.0032	17.5	0.0	0.0052	16.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|84489603|ref|YP_447835.1|	-	0.02	14.8	0.0	0.049	13.5	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HTH_IclR	PF09339.10	gi|84489603|ref|YP_447835.1|	-	0.025	14.4	0.0	0.22	11.4	0.0	2.1	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|84489603|ref|YP_447835.1|	-	0.033	13.8	0.1	0.075	12.6	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|84489603|ref|YP_447835.1|	-	0.039	14.5	0.1	0.099	13.2	0.1	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.12	gi|84489603|ref|YP_447835.1|	-	0.091	12.7	0.6	0.19	11.7	0.1	1.8	2	0	0	2	2	2	0	HTH	domain
SpoIIIAH	PF12685.7	gi|84489604|ref|YP_447836.1|	-	0.0033	17.3	10.2	0.0054	16.6	10.2	1.4	1	0	0	1	1	1	1	SpoIIIAH-like	protein
DUF4148	PF13663.6	gi|84489604|ref|YP_447836.1|	-	0.035	14.3	0.4	0.1	12.8	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4148)
DUF2981	PF11200.8	gi|84489604|ref|YP_447836.1|	-	0.82	9.3	7.1	1.1	8.9	7.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2981)
Dicty_REP	PF05086.12	gi|84489604|ref|YP_447836.1|	-	1.4	6.8	9.3	1.6	6.6	9.3	1.0	1	0	0	1	1	1	0	Dictyostelium	(Slime	Mold)	REP	protein
Macoilin	PF09726.9	gi|84489604|ref|YP_447836.1|	-	2.5	6.5	10.5	2.9	6.3	10.5	1.1	1	0	0	1	1	1	0	Macoilin	family
Lin-8	PF03353.15	gi|84489604|ref|YP_447836.1|	-	9.2	5.7	7.2	12	5.4	7.2	1.1	1	0	0	1	1	1	0	Ras-mediated	vulval-induction	antagonist
DUF763	PF05559.11	gi|84489605|ref|YP_447837.1|	-	1.4e-133	444.9	0.0	1.6e-133	444.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH	PF00633.23	gi|84489605|ref|YP_447837.1|	-	0.0029	17.4	0.1	0.0059	16.4	0.1	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Pox_T4_C	PF04490.12	gi|84489605|ref|YP_447837.1|	-	0.019	15.1	0.1	0.036	14.2	0.1	1.4	1	0	0	1	1	1	0	Poxvirus	T4	protein,	C	terminus
HHH_5	PF14520.6	gi|84489605|ref|YP_447837.1|	-	0.065	13.9	0.1	0.17	12.5	0.1	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
CAMSAP_CKK	PF08683.11	gi|84489605|ref|YP_447837.1|	-	0.13	12.5	0.0	5.3	7.2	0.0	2.4	2	0	0	2	2	2	0	Microtubule-binding	calmodulin-regulated	spectrin-associated
FMN_red	PF03358.15	gi|84489606|ref|YP_447838.1|	-	1.9e-21	76.4	0.0	3e-21	75.8	0.0	1.3	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489606|ref|YP_447838.1|	-	1.4e-06	28.2	0.0	2.3e-06	27.4	0.0	1.5	1	1	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|84489606|ref|YP_447838.1|	-	0.00016	22.0	0.0	0.00026	21.2	0.0	1.6	1	1	0	1	1	1	1	Flavodoxin	domain
Lysine_decarbox	PF03641.14	gi|84489607|ref|YP_447839.1|	-	3.7e-36	124.1	0.2	4.5e-36	123.9	0.2	1.1	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
LDcluster4	PF18306.1	gi|84489607|ref|YP_447839.1|	-	6.2e-21	74.6	0.0	7.1e-21	74.4	0.0	1.1	1	0	0	1	1	1	1	SLOG	cluster4	family
Acetyltransf_9	PF13527.7	gi|84489608|ref|YP_447840.1|	-	1.7e-10	41.0	0.1	2.5e-10	40.5	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|84489608|ref|YP_447840.1|	-	2.8e-09	37.2	0.2	4e-09	36.7	0.2	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|84489608|ref|YP_447840.1|	-	6.5e-09	36.1	0.2	9.8e-09	35.5	0.2	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|84489608|ref|YP_447840.1|	-	0.00018	21.4	0.2	0.00035	20.5	0.2	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|84489608|ref|YP_447840.1|	-	0.012	15.6	0.0	0.099	12.6	0.0	2.3	1	1	1	2	2	2	0	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|84489608|ref|YP_447840.1|	-	0.023	14.8	0.0	0.063	13.4	0.0	1.7	1	1	0	1	1	1	0	GCN5-related	N-acetyl-transferase
MOZ_SAS	PF01853.18	gi|84489608|ref|YP_447840.1|	-	0.054	13.2	0.1	0.066	12.9	0.1	1.4	1	0	0	1	1	1	0	MOZ/SAS	family
HGTP_anticodon	PF03129.20	gi|84489608|ref|YP_447840.1|	-	0.14	12.3	0.0	0.3	11.3	0.0	1.5	1	0	0	1	1	1	0	Anticodon	binding	domain
GNAT_acetyltr_2	PF13718.6	gi|84489608|ref|YP_447840.1|	-	0.14	11.5	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
Acetyltransf_1	PF00583.25	gi|84489609|ref|YP_447841.1|	-	0.0042	17.3	0.0	0.0072	16.5	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
ABC_tran	PF00005.27	gi|84489612|ref|YP_447844.1|	-	9.6e-23	81.2	0.0	1.5e-22	80.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|84489612|ref|YP_447844.1|	-	0.00013	21.5	1.2	0.0082	15.6	0.0	2.1	1	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|84489612|ref|YP_447844.1|	-	0.0013	18.7	0.3	0.0022	17.9	0.1	1.5	2	0	0	2	2	2	1	RsgA	GTPase
AAA_22	PF13401.6	gi|84489612|ref|YP_447844.1|	-	0.0015	18.8	0.0	0.0026	18.0	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|84489612|ref|YP_447844.1|	-	0.0039	16.9	0.0	0.0088	15.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|84489612|ref|YP_447844.1|	-	0.0068	16.9	1.2	0.012	16.2	1.2	1.7	1	1	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|84489612|ref|YP_447844.1|	-	0.011	14.8	0.0	0.015	14.3	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_18	PF13238.6	gi|84489612|ref|YP_447844.1|	-	0.011	16.3	0.0	0.027	15.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_PrkA	PF08298.11	gi|84489612|ref|YP_447844.1|	-	0.019	13.9	0.0	0.026	13.4	0.0	1.2	1	0	0	1	1	1	0	PrkA	AAA	domain
AAA_21	PF13304.6	gi|84489612|ref|YP_447844.1|	-	0.019	14.8	2.2	0.17	11.6	0.4	2.2	1	1	1	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
T2SSE	PF00437.20	gi|84489612|ref|YP_447844.1|	-	0.039	13.0	0.0	0.05	12.7	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NTPase_1	PF03266.15	gi|84489612|ref|YP_447844.1|	-	0.044	13.7	0.2	5.2	7.0	0.0	2.1	2	0	0	2	2	2	0	NTPase
ATP_bind_1	PF03029.17	gi|84489612|ref|YP_447844.1|	-	0.057	13.2	0.2	0.12	12.2	0.2	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_24	PF13479.6	gi|84489612|ref|YP_447844.1|	-	0.1	12.3	0.0	0.45	10.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.22	gi|84489612|ref|YP_447844.1|	-	0.13	12.7	0.2	0.23	11.9	0.2	1.6	1	1	0	1	1	1	0	RNA	helicase
AAA_30	PF13604.6	gi|84489612|ref|YP_447844.1|	-	0.13	11.9	0.0	0.48	10.1	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.9	gi|84489612|ref|YP_447844.1|	-	0.15	11.8	0.2	0.34	10.6	0.0	1.6	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
ABC_tran	PF00005.27	gi|84489613|ref|YP_447845.1|	-	3.7e-22	79.3	0.1	5.1e-22	78.9	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|84489613|ref|YP_447845.1|	-	3.2e-15	56.4	0.6	5.8e-15	55.6	0.6	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|84489613|ref|YP_447845.1|	-	2.5e-05	24.3	0.1	0.018	14.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_16	PF13191.6	gi|84489613|ref|YP_447845.1|	-	0.0013	19.1	0.0	0.0023	18.3	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
PhoH	PF02562.16	gi|84489613|ref|YP_447845.1|	-	0.0023	17.4	0.1	0.12	11.8	0.0	2.2	2	0	0	2	2	2	1	PhoH-like	protein
SMC_N	PF02463.19	gi|84489613|ref|YP_447845.1|	-	0.0028	17.1	0.2	0.012	15.1	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.21	gi|84489613|ref|YP_447845.1|	-	0.0029	17.0	0.0	0.0047	16.3	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_29	PF13555.6	gi|84489613|ref|YP_447845.1|	-	0.007	16.1	0.1	0.017	14.8	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|84489613|ref|YP_447845.1|	-	0.0076	16.5	0.1	0.031	14.5	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|84489613|ref|YP_447845.1|	-	0.0087	15.8	0.0	0.012	15.3	0.0	1.2	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DUF2075	PF09848.9	gi|84489613|ref|YP_447845.1|	-	0.011	14.9	0.1	0.015	14.6	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
T2SSE	PF00437.20	gi|84489613|ref|YP_447845.1|	-	0.039	13.0	0.1	0.099	11.7	0.0	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
MobB	PF03205.14	gi|84489613|ref|YP_447845.1|	-	0.053	13.4	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_7	PF12775.7	gi|84489613|ref|YP_447845.1|	-	0.069	12.7	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
CinA_KH	PF18146.1	gi|84489613|ref|YP_447845.1|	-	0.077	13.2	0.1	0.32	11.2	0.0	2.0	3	0	0	3	3	2	0	Damage-inducible	protein	CinA	KH	domain
RsgA_GTPase	PF03193.16	gi|84489613|ref|YP_447845.1|	-	0.08	12.8	0.1	0.19	11.6	0.1	1.7	1	0	0	1	1	1	0	RsgA	GTPase
NB-ARC	PF00931.22	gi|84489613|ref|YP_447845.1|	-	0.11	11.7	0.0	0.19	10.9	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
DUF87	PF01935.17	gi|84489613|ref|YP_447845.1|	-	0.86	9.7	6.3	6.9	6.7	6.3	2.4	1	1	0	1	1	1	0	Helicase	HerA,	central	domain
BPD_transp_1	PF00528.22	gi|84489614|ref|YP_447846.1|	-	3.8e-20	72.4	8.0	3.8e-20	72.4	8.0	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|84489615|ref|YP_447847.1|	-	3.6e-39	134.4	12.2	3.6e-39	134.4	12.2	2.0	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SurA_N_2	PF13623.6	gi|84489615|ref|YP_447847.1|	-	0.018	14.9	0.9	0.12	12.3	0.1	2.5	2	0	0	2	2	2	0	SurA	N-terminal	domain
SBP_bac_5	PF00496.22	gi|84489616|ref|YP_447848.1|	-	3.1e-70	237.0	13.8	3.1e-70	237.0	13.8	1.3	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Spa1_C	PF18218.1	gi|84489616|ref|YP_447848.1|	-	2.7	8.5	6.9	14	6.2	0.2	3.7	4	1	0	4	4	4	0	Lantibiotic	immunity	protein	Spa1	C-terminal	domain
Acetyltransf_1	PF00583.25	gi|84489617|ref|YP_447849.1|	-	8e-13	48.7	0.0	9.7e-13	48.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|84489617|ref|YP_447849.1|	-	4.3e-08	33.2	0.1	6.6e-08	32.6	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|84489617|ref|YP_447849.1|	-	1.1e-05	25.8	0.0	1.6e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|84489617|ref|YP_447849.1|	-	0.00033	20.7	0.0	0.00044	20.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|84489617|ref|YP_447849.1|	-	0.00071	19.7	2.0	0.00071	19.7	2.0	2.3	1	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.6	gi|84489617|ref|YP_447849.1|	-	0.043	13.8	0.0	0.083	12.9	0.0	1.5	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Methylase_S	PF01420.19	gi|84489617|ref|YP_447849.1|	-	2.1	8.5	10.4	0.34	11.1	5.4	1.9	1	1	1	2	2	2	0	Type	I	restriction	modification	DNA	specificity	domain
B12-binding_2	PF02607.17	gi|84489618|ref|YP_447850.1|	-	3.1e-17	62.8	0.1	7.2e-17	61.6	0.1	1.6	1	0	0	1	1	1	1	B12	binding	domain
B12-binding	PF02310.19	gi|84489618|ref|YP_447850.1|	-	4.6e-14	52.5	0.0	8.3e-14	51.7	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
MtaB	PF12176.8	gi|84489619|ref|YP_447851.1|	-	3e-207	688.9	7.8	3.4e-207	688.8	7.8	1.0	1	0	0	1	1	1	1	Methanol-cobalamin	methyltransferase	B	subunit
Thioredoxin_3	PF13192.6	gi|84489620|ref|YP_447852.1|	-	2.8e-15	56.1	0.3	3e-15	56.0	0.3	1.1	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|84489620|ref|YP_447852.1|	-	7.5e-11	42.1	0.2	1.1e-10	41.6	0.2	1.3	1	0	0	1	1	1	1	Glutaredoxin
Thioredoxin	PF00085.20	gi|84489620|ref|YP_447852.1|	-	1.5e-05	24.9	0.1	1.6e-05	24.8	0.1	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.20	gi|84489620|ref|YP_447852.1|	-	2.3e-05	24.3	0.1	0.0044	16.8	0.0	2.0	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_4	PF13462.6	gi|84489620|ref|YP_447852.1|	-	5.3e-05	23.4	0.7	0.13	12.4	0.1	2.0	1	1	1	2	2	2	2	Thioredoxin
DUF836	PF05768.14	gi|84489620|ref|YP_447852.1|	-	0.0003	21.2	0.0	0.00033	21.0	0.0	1.1	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
DUF1223	PF06764.11	gi|84489620|ref|YP_447852.1|	-	0.00037	20.6	0.3	0.0064	16.5	0.1	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1223)
Thioredoxin_2	PF13098.6	gi|84489620|ref|YP_447852.1|	-	0.0096	16.4	1.1	0.031	14.7	1.1	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
AhpC-TSA	PF00578.21	gi|84489620|ref|YP_447852.1|	-	0.05	13.5	0.0	0.056	13.4	0.0	1.2	1	0	0	1	1	1	0	AhpC/TSA	family
DUF2703	PF10865.8	gi|84489620|ref|YP_447852.1|	-	0.08	13.1	0.0	0.11	12.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2703)
Peptidase_M78	PF06114.13	gi|84489621|ref|YP_447853.1|	-	0.086	12.8	0.2	0.17	11.8	0.2	1.5	1	0	0	1	1	1	0	IrrE	N-terminal-like	domain
MarR	PF01047.22	gi|84489623|ref|YP_447855.1|	-	1.9e-08	34.1	0.0	4.6e-08	32.9	0.0	1.6	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|84489623|ref|YP_447855.1|	-	4.7e-05	23.2	0.0	7.2e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
DUF3116	PF11313.8	gi|84489623|ref|YP_447855.1|	-	9.4e-05	22.2	0.3	0.0003	20.6	0.0	1.9	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF3116)
HxlR	PF01638.17	gi|84489623|ref|YP_447855.1|	-	0.00013	21.8	0.1	0.00022	21.0	0.1	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.6	gi|84489623|ref|YP_447855.1|	-	0.00031	20.9	0.1	0.00061	19.9	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.6	gi|84489623|ref|YP_447855.1|	-	0.0006	19.9	0.0	0.0008	19.5	0.0	1.2	1	0	0	1	1	1	1	Replication-relaxation
NGF	PF00243.18	gi|84489623|ref|YP_447855.1|	-	0.0024	18.1	0.2	0.0036	17.5	0.2	1.4	1	0	0	1	1	1	1	Nerve	growth	factor	family
HTH_27	PF13463.6	gi|84489623|ref|YP_447855.1|	-	0.0036	17.8	0.0	0.016	15.7	0.0	2.0	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
MatE	PF01554.18	gi|84489624|ref|YP_447856.1|	-	1.7e-60	203.3	48.6	8.2e-32	110.1	18.8	2.7	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|84489624|ref|YP_447856.1|	-	3.6e-13	49.8	17.2	3.6e-13	49.8	17.2	4.9	4	1	1	5	5	5	3	Polysaccharide	biosynthesis	C-terminal	domain
MRAP	PF15183.6	gi|84489624|ref|YP_447856.1|	-	0.04	13.9	8.0	0.23	11.4	0.0	3.6	2	1	1	3	3	3	0	Melanocortin-2	receptor	accessory	protein	family
DUF1490	PF07371.12	gi|84489625|ref|YP_447857.1|	-	7.9e-05	22.7	0.2	9.8e-05	22.4	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1490)
E1-E2_ATPase	PF00122.20	gi|84489626|ref|YP_447858.1|	-	6.9e-38	130.0	4.2	1.5e-37	128.9	4.2	1.6	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|84489626|ref|YP_447858.1|	-	2e-35	123.0	1.6	2.5e-35	122.7	0.6	1.7	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|84489626|ref|YP_447858.1|	-	3.2e-06	27.1	0.1	3.2e-06	27.1	0.1	3.0	5	1	0	6	6	6	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|84489626|ref|YP_447858.1|	-	0.026	14.9	0.0	0.061	13.7	0.0	1.7	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
CoA_binding_2	PF13380.6	gi|84489626|ref|YP_447858.1|	-	0.11	13.0	0.1	13	6.3	0.0	2.7	1	1	1	2	2	2	0	CoA	binding	domain
SpoIIIAH	PF12685.7	gi|84489627|ref|YP_447859.1|	-	0.00064	19.6	4.3	0.00074	19.4	4.3	1.0	1	0	0	1	1	1	1	SpoIIIAH-like	protein
DUF4834	PF16118.5	gi|84489627|ref|YP_447859.1|	-	0.033	15.2	4.5	0.056	14.4	4.4	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
Ly49	PF08391.10	gi|84489627|ref|YP_447859.1|	-	0.037	14.4	0.1	0.051	13.9	0.1	1.2	1	0	0	1	1	1	0	Ly49-like	protein,	N-terminal	region
TMEM192	PF14802.6	gi|84489627|ref|YP_447859.1|	-	0.053	12.6	0.1	0.066	12.3	0.1	1.1	1	0	0	1	1	1	0	TMEM192	family
TarH	PF02203.15	gi|84489627|ref|YP_447859.1|	-	0.19	11.6	1.8	0.25	11.3	1.8	1.3	1	1	0	1	1	1	0	Tar	ligand	binding	domain	homologue
Zip	PF02535.22	gi|84489627|ref|YP_447859.1|	-	0.25	10.5	0.9	0.32	10.2	0.9	1.2	1	0	0	1	1	1	0	ZIP	Zinc	transporter
ATP-synt_8	PF00895.20	gi|84489627|ref|YP_447859.1|	-	6.1	7.4	6.7	1.5	9.4	0.2	2.6	1	1	1	2	2	2	0	ATP	synthase	protein	8
DUF5518	PF17647.1	gi|84489629|ref|YP_447861.1|	-	3.2e-05	24.0	13.6	4e-05	23.7	13.6	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
ECF_trnsprt	PF12822.7	gi|84489629|ref|YP_447861.1|	-	0.037	14.1	18.2	0.48	10.5	10.0	2.1	1	1	1	2	2	2	0	ECF	transporter,	substrate-specific	component
DUF443	PF04276.12	gi|84489629|ref|YP_447861.1|	-	0.2	11.4	3.8	0.2	11.5	2.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF443)
DUF2929	PF11151.8	gi|84489629|ref|YP_447861.1|	-	0.76	10.1	0.1	0.76	10.1	0.1	3.6	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2929)
DUF4199	PF13858.6	gi|84489629|ref|YP_447861.1|	-	2.3	8.6	13.9	0.29	11.5	8.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4199)
DUF2070	PF09843.9	gi|84489629|ref|YP_447861.1|	-	8	4.6	11.7	8.6	4.5	11.7	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
TrkH	PF02386.16	gi|84489630|ref|YP_447862.1|	-	4.4e-41	140.9	27.8	6.1e-40	137.1	27.8	2.0	1	1	0	1	1	1	1	Cation	transport	protein
GPR_Gpa2_C	PF11970.8	gi|84489630|ref|YP_447862.1|	-	0.019	15.0	0.9	0.08	13.0	0.9	2.1	1	0	0	1	1	1	0	G	protein-coupled	glucose	receptor	regulating	Gpa2	C-term
Cas_TM1802	PF09484.10	gi|84489631|ref|YP_447863.1|	-	6e-22	78.1	0.6	6.8e-22	78.0	0.6	1.0	1	0	0	1	1	1	1	CRISPR-associated	protein	TM1802	(cas_TM1802)
ACP_PD	PF04336.12	gi|84489632|ref|YP_447864.1|	-	0.032	14.6	0.5	0.069	13.6	0.4	1.7	1	1	0	1	1	1	0	Acyl	carrier	protein	phosphodiesterase
BCDHK_Adom3	PF10436.9	gi|84489632|ref|YP_447864.1|	-	0.078	12.8	1.9	0.11	12.3	1.9	1.4	1	1	0	1	1	1	0	Mitochondrial	branched-chain	alpha-ketoacid	dehydrogenase	kinase
Ion_trans_2	PF07885.16	gi|84489633|ref|YP_447865.1|	-	1.4e-13	50.6	8.9	1.4e-13	50.6	8.9	2.6	3	0	0	3	3	2	1	Ion	channel
Ion_trans	PF00520.31	gi|84489633|ref|YP_447865.1|	-	5.6e-07	29.0	36.0	1e-06	28.2	36.0	1.4	1	1	0	1	1	1	1	Ion	transport	protein
Lig_chan	PF00060.26	gi|84489633|ref|YP_447865.1|	-	0.00019	21.3	0.0	0.00039	20.3	0.0	1.6	1	0	0	1	1	1	1	Ligand-gated	ion	channel
NPV_P10	PF05531.12	gi|84489633|ref|YP_447865.1|	-	0.0027	18.2	1.6	0.0061	17.0	1.6	1.6	1	0	0	1	1	1	1	Nucleopolyhedrovirus	P10	protein
DUF2730	PF10805.8	gi|84489633|ref|YP_447865.1|	-	0.0066	16.5	0.5	0.0066	16.5	0.5	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2730)
DUF5362	PF17319.2	gi|84489633|ref|YP_447865.1|	-	0.018	14.9	0.2	0.018	14.9	0.2	3.4	3	1	1	4	4	4	0	Family	of	unknown	function	(DUF5362)
DUF1640	PF07798.11	gi|84489633|ref|YP_447865.1|	-	0.018	15.1	1.4	0.033	14.2	1.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
Fungal_TACC	PF12709.7	gi|84489633|ref|YP_447865.1|	-	0.02	15.3	5.0	0.021	15.3	3.6	1.7	1	1	0	1	1	1	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
Wtap	PF17098.5	gi|84489633|ref|YP_447865.1|	-	0.026	14.5	0.5	0.037	13.9	0.5	1.2	1	0	0	1	1	1	0	WTAP/Mum2p	family
DUF4407	PF14362.6	gi|84489633|ref|YP_447865.1|	-	0.044	13.1	0.3	0.073	12.4	0.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF3450	PF11932.8	gi|84489633|ref|YP_447865.1|	-	0.054	12.8	1.2	0.075	12.3	1.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Allexi_40kDa	PF05549.11	gi|84489633|ref|YP_447865.1|	-	0.096	12.2	0.7	0.13	11.8	0.7	1.2	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
DivIC	PF04977.15	gi|84489633|ref|YP_447865.1|	-	0.15	11.9	5.1	0.36	10.6	2.7	2.9	2	1	0	2	2	2	0	Septum	formation	initiator
Macoilin	PF09726.9	gi|84489633|ref|YP_447865.1|	-	0.18	10.3	3.2	0.3	9.6	3.2	1.3	1	0	0	1	1	1	0	Macoilin	family
bZIP_2	PF07716.15	gi|84489633|ref|YP_447865.1|	-	0.5	10.5	3.2	0.45	10.6	1.0	1.9	2	0	0	2	2	2	0	Basic	region	leucine	zipper
BRI3BP	PF14965.6	gi|84489633|ref|YP_447865.1|	-	9	5.8	14.9	0.25	10.8	0.9	3.2	3	1	0	3	3	3	0	Negative	regulator	of	p53/TP53
Ion_trans_2	PF07885.16	gi|84489634|ref|YP_447866.1|	-	4.2e-11	42.7	15.2	4.2e-11	42.7	15.2	2.2	2	1	0	2	2	2	1	Ion	channel
Ion_trans	PF00520.31	gi|84489634|ref|YP_447866.1|	-	6.3e-05	22.3	27.6	0.00015	21.1	27.6	1.5	1	1	0	1	1	1	1	Ion	transport	protein
FlaC_arch	PF05377.11	gi|84489634|ref|YP_447866.1|	-	0.019	15.3	1.5	0.04	14.3	1.5	1.5	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Lig_chan	PF00060.26	gi|84489634|ref|YP_447866.1|	-	0.029	14.2	5.4	0.085	12.7	5.3	1.8	1	1	0	1	1	1	0	Ligand-gated	ion	channel
Tmpp129	PF10272.9	gi|84489634|ref|YP_447866.1|	-	0.067	12.5	1.6	0.4	9.9	0.4	2.2	1	1	1	2	2	2	0	Putative	transmembrane	protein	precursor
Chlam_PMP	PF02415.17	gi|84489635|ref|YP_447867.1|	-	0.0065	16.9	1.0	0.0065	16.9	1.0	5.0	4	0	0	4	4	4	1	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_3_5	PF16640.5	gi|84489636|ref|YP_447868.1|	-	6.1e-12	45.6	28.3	1.7e-07	31.3	4.5	9.9	9	1	1	10	10	10	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489636|ref|YP_447868.1|	-	0.00013	21.9	4.8	0.00013	21.9	4.8	9.0	10	0	0	10	10	10	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|84489636|ref|YP_447868.1|	-	0.0063	16.8	5.8	0.0063	16.8	5.8	9.9	8	3	2	10	10	10	4	Invasin,	domain	3
GATase_4	PF13230.6	gi|84489638|ref|YP_447870.1|	-	6.2e-36	123.7	0.0	2.1e-35	121.9	0.0	1.6	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|84489638|ref|YP_447870.1|	-	1.9e-09	37.8	0.0	3.7e-09	36.9	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
Phage_pRha	PF09669.10	gi|84489638|ref|YP_447870.1|	-	0.0067	17.0	0.3	0.047	14.2	0.3	2.3	1	1	0	1	1	1	1	Phage	regulatory	protein	Rha	(Phage_pRha)
DUF4460	PF14687.6	gi|84489638|ref|YP_447870.1|	-	0.043	13.9	1.8	0.091	12.8	0.8	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4460)
SeqA_N	PF17206.3	gi|84489639|ref|YP_447871.1|	-	0.11	11.8	1.0	0.27	10.6	1.0	1.7	1	0	0	1	1	1	0	SeqA	protein	N-terminal	domain
DUF4065	PF13274.6	gi|84489640|ref|YP_447872.1|	-	9.5e-09	36.1	0.8	1.7e-08	35.3	0.1	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4065)
DXP_redisom_C	PF08436.12	gi|84489641|ref|YP_447873.1|	-	0.063	13.4	0.1	0.51	10.5	0.0	2.1	1	1	1	2	2	2	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase	C-terminal	domain
DUF2373	PF10180.9	gi|84489642|ref|YP_447874.1|	-	0.085	12.7	2.5	0.28	11.0	0.2	2.2	1	1	1	2	2	2	0	Uncharacterised	conserved	protein	(DUF2373)
DUF3959	PF13105.6	gi|84489642|ref|YP_447874.1|	-	0.15	11.6	1.0	0.18	11.2	1.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3959)
Flavodoxin_3	PF12641.7	gi|84489643|ref|YP_447875.1|	-	5.6e-08	32.6	0.3	7.8e-07	28.9	0.1	1.9	1	1	1	2	2	2	1	Flavodoxin	domain
Flavodoxin_5	PF12724.7	gi|84489643|ref|YP_447875.1|	-	2e-06	28.1	0.0	2.6e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|84489643|ref|YP_447875.1|	-	0.00047	20.4	0.2	0.01	16.0	0.2	2.1	1	1	0	1	1	1	1	Flavodoxin
AgrD	PF05931.11	gi|84489643|ref|YP_447875.1|	-	0.016	15.2	0.0	0.025	14.6	0.0	1.3	1	0	0	1	1	1	0	Staphylococcal	AgrD	protein
Phage_terminase	PF10668.9	gi|84489643|ref|YP_447875.1|	-	0.033	14.2	0.1	0.12	12.3	0.0	1.9	2	0	0	2	2	2	0	Phage	terminase	small	subunit
FMN_red	PF03358.15	gi|84489644|ref|YP_447876.1|	-	4.1e-25	88.3	0.0	4.9e-25	88.1	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489644|ref|YP_447876.1|	-	6.8e-19	68.4	0.0	8.5e-19	68.0	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|84489644|ref|YP_447876.1|	-	0.024	14.9	0.0	0.038	14.2	0.0	1.4	1	0	0	1	1	1	0	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|84489644|ref|YP_447876.1|	-	0.043	14.0	0.0	0.061	13.5	0.0	1.3	1	0	0	1	1	1	0	Flavodoxin
Hydrolase_4	PF12146.8	gi|84489645|ref|YP_447877.1|	-	1.3e-14	54.1	0.0	2.3e-14	53.3	0.0	1.4	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
Peptidase_S9	PF00326.21	gi|84489645|ref|YP_447877.1|	-	8.4e-12	45.0	0.0	1.1e-11	44.6	0.0	1.1	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_1	PF00561.20	gi|84489645|ref|YP_447877.1|	-	1.6e-11	44.3	0.0	4.6e-10	39.6	0.0	2.0	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
UPF0227	PF05728.12	gi|84489645|ref|YP_447877.1|	-	2.8e-07	30.7	0.0	3.8e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0227)
Abhydrolase_6	PF12697.7	gi|84489645|ref|YP_447877.1|	-	1.3e-05	25.9	0.0	1.8e-05	25.5	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
AXE1	PF05448.12	gi|84489645|ref|YP_447877.1|	-	1.9e-05	23.5	0.0	0.00029	19.6	0.0	2.1	1	1	1	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_2	PF02230.16	gi|84489645|ref|YP_447877.1|	-	8e-05	22.5	0.2	0.07	12.9	0.0	2.7	2	1	1	3	3	3	2	Phospholipase/Carboxylesterase
DUF1100	PF06500.11	gi|84489645|ref|YP_447877.1|	-	0.00014	20.8	0.0	0.00014	20.8	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1100)
DUF676	PF05057.14	gi|84489645|ref|YP_447877.1|	-	0.00026	20.5	0.5	0.00076	19.1	0.1	1.8	1	1	1	2	2	2	1	Putative	serine	esterase	(DUF676)
Abhydrolase_3	PF07859.13	gi|84489645|ref|YP_447877.1|	-	0.0025	17.7	0.0	0.005	16.7	0.0	1.6	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.7	gi|84489645|ref|YP_447877.1|	-	0.0026	17.5	0.0	0.0037	17.1	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.18	gi|84489645|ref|YP_447877.1|	-	0.0027	17.4	0.0	0.023	14.3	0.0	1.9	1	1	1	2	2	2	1	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.18	gi|84489645|ref|YP_447877.1|	-	0.003	17.1	0.0	0.02	14.5	0.0	1.9	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
DUF2974	PF11187.8	gi|84489645|ref|YP_447877.1|	-	0.0075	15.9	0.0	0.012	15.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2974)
Esterase_phd	PF10503.9	gi|84489645|ref|YP_447877.1|	-	0.01	15.3	0.0	0.02	14.4	0.0	1.7	1	1	0	1	1	1	0	Esterase	PHB	depolymerase
Hpr_kinase_N	PF02603.16	gi|84489645|ref|YP_447877.1|	-	0.019	15.0	0.0	0.62	10.1	0.0	2.9	2	1	0	2	2	2	0	HPr	Serine	kinase	N	terminus
LIDHydrolase	PF10230.9	gi|84489645|ref|YP_447877.1|	-	0.022	14.3	0.1	0.19	11.2	0.0	2.1	1	1	1	2	2	2	0	Lipid-droplet	associated	hydrolase
BAAT_C	PF08840.11	gi|84489645|ref|YP_447877.1|	-	0.033	14.1	0.0	0.048	13.6	0.0	1.2	1	0	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
PGAP1	PF07819.13	gi|84489645|ref|YP_447877.1|	-	0.052	13.3	0.0	0.089	12.5	0.0	1.3	1	0	0	1	1	1	0	PGAP1-like	protein
Lipase_3	PF01764.25	gi|84489645|ref|YP_447877.1|	-	0.15	11.9	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	Lipase	(class	3)
Acetyltransf_1	PF00583.25	gi|84489646|ref|YP_447878.1|	-	0.00067	19.9	0.0	0.0012	19.0	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|84489646|ref|YP_447878.1|	-	0.019	15.4	0.0	0.041	14.3	0.0	1.5	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
ABC_tran	PF00005.27	gi|84489647|ref|YP_447879.1|	-	6.7e-22	78.5	0.0	8.9e-22	78.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489647|ref|YP_447879.1|	-	0.00018	21.5	0.4	0.14	12.0	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
PduV-EutP	PF10662.9	gi|84489647|ref|YP_447879.1|	-	0.0007	19.4	0.1	0.0013	18.5	0.1	1.4	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_22	PF13401.6	gi|84489647|ref|YP_447879.1|	-	0.0015	18.8	0.1	0.0035	17.6	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|84489647|ref|YP_447879.1|	-	0.005	17.3	0.2	0.011	16.2	0.2	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|84489647|ref|YP_447879.1|	-	0.0082	16.7	0.0	0.013	16.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|84489647|ref|YP_447879.1|	-	0.0099	16.4	0.7	0.024	15.2	0.7	1.7	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|84489647|ref|YP_447879.1|	-	0.015	14.5	0.1	0.039	13.1	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
Rad17	PF03215.15	gi|84489647|ref|YP_447879.1|	-	0.023	14.6	0.1	0.066	13.1	0.0	1.7	2	0	0	2	2	2	0	Rad17	P-loop	domain
PRK	PF00485.18	gi|84489647|ref|YP_447879.1|	-	0.029	14.1	0.2	0.043	13.6	0.2	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
RsgA_GTPase	PF03193.16	gi|84489647|ref|YP_447879.1|	-	0.031	14.2	0.0	0.052	13.5	0.0	1.3	1	0	0	1	1	1	0	RsgA	GTPase
TniB	PF05621.11	gi|84489647|ref|YP_447879.1|	-	0.061	12.7	0.0	0.39	10.1	0.0	2.0	1	1	0	1	1	1	0	Bacterial	TniB	protein
RNA_helicase	PF00910.22	gi|84489647|ref|YP_447879.1|	-	0.062	13.7	0.0	0.13	12.7	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
TsaE	PF02367.17	gi|84489647|ref|YP_447879.1|	-	0.063	13.3	0.0	0.1	12.6	0.0	1.3	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
T2SSE	PF00437.20	gi|84489647|ref|YP_447879.1|	-	0.068	12.2	0.0	0.092	11.8	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DLIC	PF05783.11	gi|84489647|ref|YP_447879.1|	-	0.089	11.6	0.0	0.14	10.9	0.0	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
Zeta_toxin	PF06414.12	gi|84489647|ref|YP_447879.1|	-	0.12	11.7	0.0	0.16	11.2	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
AAA_14	PF13173.6	gi|84489647|ref|YP_447879.1|	-	0.12	12.5	0.5	1.8	8.6	0.5	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.7	gi|84489647|ref|YP_447879.1|	-	0.12	11.3	0.1	1.6	7.6	0.1	2.0	1	1	0	2	2	2	0	AAA-like	domain
ATPase	PF06745.13	gi|84489647|ref|YP_447879.1|	-	0.13	11.5	0.3	0.27	10.6	0.1	1.6	2	0	0	2	2	2	0	KaiC
AAA_24	PF13479.6	gi|84489647|ref|YP_447879.1|	-	0.16	11.7	0.1	0.38	10.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|84489647|ref|YP_447879.1|	-	0.16	11.6	0.0	0.3	10.7	0.0	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ABC_tran	PF00005.27	gi|84489648|ref|YP_447880.1|	-	5.4e-23	82.0	0.0	7.7e-23	81.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|84489648|ref|YP_447880.1|	-	1.4e-08	35.1	0.1	3.4e-08	33.9	0.1	1.7	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|84489648|ref|YP_447880.1|	-	0.00013	21.5	0.2	0.00021	20.8	0.2	1.4	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|84489648|ref|YP_447880.1|	-	0.00017	21.5	0.5	0.014	15.2	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_16	PF13191.6	gi|84489648|ref|YP_447880.1|	-	0.00054	20.4	0.0	0.00063	20.2	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
Mg_chelatase	PF01078.21	gi|84489648|ref|YP_447880.1|	-	0.0013	18.1	0.3	0.0057	16.1	0.2	1.9	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_29	PF13555.6	gi|84489648|ref|YP_447880.1|	-	0.0077	15.9	0.2	0.017	14.9	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|84489648|ref|YP_447880.1|	-	0.018	15.3	0.1	0.053	13.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|84489648|ref|YP_447880.1|	-	0.041	13.6	0.0	0.069	12.9	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
RsgA_GTPase	PF03193.16	gi|84489648|ref|YP_447880.1|	-	0.071	13.0	0.1	0.14	12.1	0.1	1.4	1	0	0	1	1	1	0	RsgA	GTPase
Sigma54_activat	PF00158.26	gi|84489648|ref|YP_447880.1|	-	0.08	12.6	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
PhoH	PF02562.16	gi|84489648|ref|YP_447880.1|	-	0.083	12.3	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	PhoH-like	protein
DUF87	PF01935.17	gi|84489648|ref|YP_447880.1|	-	0.18	11.9	3.0	0.16	12.1	0.9	1.9	1	1	1	2	2	2	0	Helicase	HerA,	central	domain
AAA	PF00004.29	gi|84489648|ref|YP_447880.1|	-	0.22	11.9	1.3	5.1	7.5	1.3	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
BPD_transp_1	PF00528.22	gi|84489649|ref|YP_447881.1|	-	2.6e-16	59.9	11.7	2.6e-16	59.9	11.7	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|84489650|ref|YP_447882.1|	-	7.3e-38	130.2	12.8	7.3e-38	130.2	12.8	2.1	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|84489651|ref|YP_447883.1|	-	1.2e-73	248.3	5.7	1.5e-73	247.9	5.7	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Ferritin	PF00210.24	gi|84489652|ref|YP_447884.1|	-	2.7e-38	131.1	5.5	3.2e-38	130.9	5.5	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
DUF4165	PF13752.6	gi|84489653|ref|YP_447885.1|	-	0.0018	18.2	0.1	0.0044	17.0	0.1	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4165)
DUF2717	PF10911.8	gi|84489653|ref|YP_447885.1|	-	0.02	14.6	0.0	0.051	13.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2717)
Internalin_N	PF12354.8	gi|84489653|ref|YP_447885.1|	-	0.93	9.6	3.0	0.48	10.5	0.6	1.8	2	0	0	2	2	2	0	Bacterial	adhesion/invasion	protein	N	terminal
polyprenyl_synt	PF00348.17	gi|84489654|ref|YP_447886.1|	-	5.1e-77	258.4	0.1	6.5e-77	258.0	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Lactamase_B_2	PF12706.7	gi|84489655|ref|YP_447887.1|	-	2.6e-12	46.7	0.2	2.7e-10	40.1	0.1	2.3	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|84489655|ref|YP_447887.1|	-	2.9e-12	46.3	1.1	1.6e-10	40.8	0.1	2.8	3	0	0	3	3	3	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|84489655|ref|YP_447887.1|	-	3.3e-09	37.0	1.0	1.1e-08	35.4	1.0	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Ribosomal_S17	PF00366.20	gi|84489655|ref|YP_447887.1|	-	0.078	13.1	0.0	0.67	10.1	0.0	2.4	2	0	0	2	2	2	0	Ribosomal	protein	S17
ID	PF18543.1	gi|84489655|ref|YP_447887.1|	-	0.31	11.1	1.9	0.86	9.7	0.4	2.4	3	0	0	3	3	3	0	Intracellular	delivery	domain
FMN_dh	PF01070.18	gi|84489656|ref|YP_447888.1|	-	8.4e-31	107.3	0.2	2.5e-21	76.1	0.2	2.8	1	1	2	3	3	3	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|84489656|ref|YP_447888.1|	-	2.9e-07	29.8	10.9	0.00018	20.6	4.1	3.1	3	2	1	4	4	4	2	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.17	gi|84489656|ref|YP_447888.1|	-	2.3e-06	27.0	1.4	3.4e-06	26.4	0.6	1.6	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
NMO	PF03060.15	gi|84489656|ref|YP_447888.1|	-	0.0005	19.6	0.5	0.001	18.6	0.5	1.5	1	1	0	1	1	1	1	Nitronate	monooxygenase
SOR_SNZ	PF01680.17	gi|84489656|ref|YP_447888.1|	-	0.00061	19.6	0.2	0.0014	18.5	0.2	1.5	1	0	0	1	1	1	1	SOR/SNZ	family
DUF561	PF04481.12	gi|84489656|ref|YP_447888.1|	-	0.011	14.9	0.1	0.028	13.6	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
ThiG	PF05690.14	gi|84489656|ref|YP_447888.1|	-	0.012	15.0	2.5	0.31	10.3	0.0	2.7	2	1	1	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
AA_kinase	PF00696.28	gi|84489657|ref|YP_447889.1|	-	4.3e-48	164.0	0.6	4.9e-48	163.8	0.6	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
GHMP_kinases_C	PF08544.13	gi|84489658|ref|YP_447890.1|	-	7.8e-14	51.8	0.1	4.9e-13	49.3	0.0	2.1	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|84489658|ref|YP_447890.1|	-	1.2e-12	47.9	0.0	2.5e-12	46.9	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GalKase_gal_bdg	PF10509.9	gi|84489658|ref|YP_447890.1|	-	0.011	15.3	0.0	0.031	13.8	0.0	1.8	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
HI0933_like	PF03486.14	gi|84489658|ref|YP_447890.1|	-	0.019	13.7	0.2	4.5	5.9	0.0	2.3	2	0	0	2	2	2	0	HI0933-like	protein
SDH_beta	PF03315.15	gi|84489658|ref|YP_447890.1|	-	0.088	13.2	0.0	0.16	12.3	0.0	1.5	1	0	0	1	1	1	0	Serine	dehydratase	beta	chain
Memo	PF01875.17	gi|84489659|ref|YP_447891.1|	-	5e-75	252.1	0.7	5.7e-75	251.9	0.7	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.18	gi|84489659|ref|YP_447891.1|	-	0.0036	16.4	0.0	0.0065	15.6	0.0	1.5	1	1	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
APG12	PF04110.13	gi|84489659|ref|YP_447891.1|	-	0.022	15.2	2.0	0.028	14.8	0.6	2.0	2	0	0	2	2	2	0	Ubiquitin-like	autophagy	protein	Apg12
Ribosomal_S2	PF00318.20	gi|84489660|ref|YP_447892.1|	-	1.4e-27	96.3	0.3	5.9e-14	51.8	0.4	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Fer4	PF00037.27	gi|84489661|ref|YP_447893.1|	-	3.4e-08	33.0	16.8	3.1e-06	26.8	7.2	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489661|ref|YP_447893.1|	-	8.1e-07	29.1	11.7	1.5e-06	28.2	11.8	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489661|ref|YP_447893.1|	-	7.7e-06	26.4	31.2	0.00028	21.4	15.4	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489661|ref|YP_447893.1|	-	3.4e-05	23.9	29.9	0.00032	20.7	15.1	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489661|ref|YP_447893.1|	-	7.4e-05	23.6	14.0	0.011	16.6	7.2	2.1	1	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|84489661|ref|YP_447893.1|	-	0.00019	21.5	17.1	0.00046	20.3	17.1	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489661|ref|YP_447893.1|	-	0.00042	20.6	15.9	0.0069	16.8	7.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84489661|ref|YP_447893.1|	-	0.00054	19.9	18.7	0.0086	16.1	3.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84489661|ref|YP_447893.1|	-	0.0032	17.5	14.7	0.074	13.2	5.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84489661|ref|YP_447893.1|	-	0.025	15.1	14.7	0.048	14.2	5.6	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489661|ref|YP_447893.1|	-	0.27	12.3	20.1	0.7	11.0	11.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489661|ref|YP_447893.1|	-	0.6	10.6	14.2	0.31	11.5	5.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489661|ref|YP_447893.1|	-	0.71	10.1	17.1	1.4	9.1	6.8	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84489661|ref|YP_447893.1|	-	0.75	10.4	17.9	2.1	9.0	7.3	2.1	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Enolase_C	PF00113.22	gi|84489662|ref|YP_447894.1|	-	6.7e-80	268.5	1.3	6.9e-80	268.4	0.2	1.5	2	0	0	2	2	2	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|84489662|ref|YP_447894.1|	-	3.3e-39	134.1	0.1	6.9e-39	133.0	0.1	1.6	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|84489662|ref|YP_447894.1|	-	6e-07	29.3	0.0	1.1e-06	28.4	0.0	1.5	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
RNA_pol_Rpb6	PF01192.22	gi|84489663|ref|YP_447895.1|	-	8.8e-14	51.2	0.0	1e-13	50.9	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
RNA_pol_N	PF01194.17	gi|84489664|ref|YP_447896.1|	-	2.4e-25	88.6	0.3	2.6e-25	88.5	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Ribosomal_S9	PF00380.19	gi|84489665|ref|YP_447897.1|	-	9.2e-33	113.3	0.3	1e-32	113.2	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.18	gi|84489666|ref|YP_447898.1|	-	6e-10	39.5	0.0	8.6e-08	32.5	0.0	2.2	1	1	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_L27A	PF00828.19	gi|84489667|ref|YP_447899.1|	-	2.5e-11	44.4	0.5	3.3e-11	44.0	0.5	1.3	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L18	PF17135.4	gi|84489667|ref|YP_447899.1|	-	1.1e-10	41.3	0.0	1.2e-10	41.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
RNA_pol_A_bac	PF01000.26	gi|84489668|ref|YP_447900.1|	-	2.5e-30	105.1	1.0	4.4e-29	101.1	0.0	2.3	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|84489668|ref|YP_447900.1|	-	1e-17	63.3	0.0	1.5e-17	62.8	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L_2	PF13656.6	gi|84489668|ref|YP_447900.1|	-	0.00071	19.3	0.1	0.098	12.4	0.0	3.1	3	0	0	3	3	3	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Ribosomal_S11	PF00411.19	gi|84489669|ref|YP_447901.1|	-	1.1e-45	154.6	2.3	1.3e-45	154.3	2.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
S4	PF01479.25	gi|84489670|ref|YP_447902.1|	-	2.8e-10	39.7	0.0	6.6e-10	38.5	0.0	1.6	2	0	0	2	2	2	1	S4	domain
Ribosomal_S4	PF00163.19	gi|84489670|ref|YP_447902.1|	-	0.00036	21.4	0.2	0.00075	20.4	0.1	1.6	2	0	0	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribonuc_red_lgN	PF00317.21	gi|84489670|ref|YP_447902.1|	-	0.026	14.5	0.0	0.047	13.7	0.0	1.4	1	0	0	1	1	1	0	Ribonucleotide	reductase,	all-alpha	domain
DUF3677	PF12432.8	gi|84489670|ref|YP_447902.1|	-	0.069	13.5	0.1	0.15	12.4	0.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3677)
Ribosomal_S13	PF00416.22	gi|84489671|ref|YP_447903.1|	-	4e-43	146.9	0.3	4.6e-43	146.7	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.11	gi|84489671|ref|YP_447903.1|	-	0.1	11.3	0.0	0.17	10.6	0.0	1.2	1	1	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_3	PF12836.7	gi|84489671|ref|YP_447903.1|	-	0.16	12.2	0.0	0.48	10.7	0.0	1.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
TruB_N	PF01509.18	gi|84489672|ref|YP_447904.1|	-	2e-27	96.4	0.8	4.3e-24	85.6	0.8	3.2	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
TruB_C_2	PF16198.5	gi|84489672|ref|YP_447904.1|	-	1.6e-24	85.8	0.1	3e-24	84.9	0.1	1.5	1	0	0	1	1	1	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
PUA	PF01472.20	gi|84489672|ref|YP_447904.1|	-	2.2e-16	59.6	0.3	4.6e-16	58.5	0.3	1.6	1	0	0	1	1	1	1	PUA	domain
DKCLD	PF08068.12	gi|84489672|ref|YP_447904.1|	-	7.6e-16	57.9	0.7	1.8e-15	56.7	0.2	1.9	2	0	0	2	2	2	1	DKCLD	(NUC011)	domain
UPF0113	PF03657.13	gi|84489672|ref|YP_447904.1|	-	3.7e-05	23.9	0.6	8.7e-05	22.7	0.1	1.9	2	0	0	2	2	2	1	UPF0113	PUA	domain
FAD_binding_3	PF01494.19	gi|84489673|ref|YP_447905.1|	-	4.2e-15	55.8	1.3	4.4e-13	49.2	1.3	2.6	1	1	0	1	1	1	1	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|84489673|ref|YP_447905.1|	-	1.6e-10	40.4	0.1	4.8e-06	25.7	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.7	gi|84489673|ref|YP_447905.1|	-	1.1e-08	34.9	0.1	1.9e-08	34.1	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|84489673|ref|YP_447905.1|	-	2.3e-08	33.2	2.4	1.1e-07	31.0	0.8	2.1	2	0	0	2	2	2	1	HI0933-like	protein
DAO	PF01266.24	gi|84489673|ref|YP_447905.1|	-	6.2e-07	29.3	1.5	0.00032	20.4	1.2	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|84489673|ref|YP_447905.1|	-	1.1e-06	28.1	0.5	2e-06	27.1	0.5	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|84489673|ref|YP_447905.1|	-	5.3e-06	25.9	0.4	2e-05	24.0	0.1	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|84489673|ref|YP_447905.1|	-	8.9e-06	25.0	0.0	1.3e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
GIDA	PF01134.22	gi|84489673|ref|YP_447905.1|	-	8.1e-05	21.9	0.5	8.1e-05	21.9	0.5	2.0	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|84489673|ref|YP_447905.1|	-	0.00021	21.5	0.1	0.00069	19.8	0.0	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.21	gi|84489673|ref|YP_447905.1|	-	0.00063	19.1	0.4	0.0012	18.2	0.4	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.17	gi|84489673|ref|YP_447905.1|	-	0.0079	15.5	1.1	0.02	14.1	0.2	2.0	2	0	0	2	2	2	1	Thi4	family
Pyr_redox_3	PF13738.6	gi|84489673|ref|YP_447905.1|	-	0.022	14.0	5.1	0.035	13.4	1.4	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|84489673|ref|YP_447905.1|	-	0.033	14.1	0.4	0.073	12.9	0.4	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|84489673|ref|YP_447905.1|	-	0.038	14.5	0.2	0.26	11.9	0.1	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
ADIP	PF11559.8	gi|84489674|ref|YP_447906.1|	-	1.3e-06	28.6	34.2	0.00014	22.0	19.3	2.5	1	1	2	3	3	3	2	Afadin-	and	alpha	-actinin-Binding
FlxA	PF14282.6	gi|84489674|ref|YP_447906.1|	-	6.9e-06	26.0	13.6	6.9e-06	26.0	13.6	2.4	1	1	1	2	2	2	1	FlxA-like	protein
APG6_N	PF17675.1	gi|84489674|ref|YP_447906.1|	-	3.9e-05	24.2	29.6	0.0051	17.3	15.3	3.0	1	1	1	2	2	2	2	Apg6	coiled-coil	region
DUF4200	PF13863.6	gi|84489674|ref|YP_447906.1|	-	6.7e-05	23.3	34.0	0.044	14.2	10.2	3.6	1	1	2	3	3	3	3	Domain	of	unknown	function	(DUF4200)
Csm1_N	PF18504.1	gi|84489674|ref|YP_447906.1|	-	9.7e-05	22.6	31.2	0.00036	20.8	5.7	4.4	2	1	3	5	5	4	2	Csm1	N-terminal	domain
CALCOCO1	PF07888.11	gi|84489674|ref|YP_447906.1|	-	0.0001	21.4	19.4	0.00014	20.8	19.4	1.2	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
DUF3450	PF11932.8	gi|84489674|ref|YP_447906.1|	-	0.00021	20.7	8.1	0.00021	20.7	8.1	2.6	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF3450)
BRE1	PF08647.11	gi|84489674|ref|YP_447906.1|	-	0.00023	21.2	16.7	0.00023	21.2	16.7	3.2	1	1	2	3	3	3	2	BRE1	E3	ubiquitin	ligase
GAS	PF13851.6	gi|84489674|ref|YP_447906.1|	-	0.00023	20.6	35.3	0.014	14.8	15.7	2.5	1	1	1	2	2	2	2	Growth-arrest	specific	micro-tubule	binding
YlqD	PF11068.8	gi|84489674|ref|YP_447906.1|	-	0.00045	20.6	28.3	0.0066	16.8	5.3	2.8	1	1	2	3	3	3	2	YlqD	protein
CEP63	PF17045.5	gi|84489674|ref|YP_447906.1|	-	0.00047	20.1	23.8	0.0041	17.1	9.5	2.4	1	1	1	2	2	2	1	Centrosomal	protein	of	63	kDa
TPR_MLP1_2	PF07926.12	gi|84489674|ref|YP_447906.1|	-	0.00071	19.6	32.9	0.037	14.1	2.5	3.3	2	1	1	3	3	3	3	TPR/MLP1/MLP2-like	protein
FliD_C	PF07195.12	gi|84489674|ref|YP_447906.1|	-	0.00074	19.0	25.3	0.079	12.4	12.2	2.4	1	1	1	2	2	2	2	Flagellar	hook-associated	protein	2	C-terminus
MAD	PF05557.13	gi|84489674|ref|YP_447906.1|	-	0.00095	17.7	24.8	0.0013	17.3	24.8	1.2	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
HOOK	PF05622.12	gi|84489674|ref|YP_447906.1|	-	0.0012	17.1	33.1	0.0075	14.5	32.0	1.8	1	1	0	1	1	1	1	HOOK	protein
Jnk-SapK_ap_N	PF09744.9	gi|84489674|ref|YP_447906.1|	-	0.0012	19.1	30.7	0.034	14.4	15.4	2.7	1	1	1	2	2	2	1	JNK_SAPK-associated	protein-1
Filament	PF00038.21	gi|84489674|ref|YP_447906.1|	-	0.0013	18.4	26.5	0.079	12.5	6.3	2.5	1	1	1	2	2	2	2	Intermediate	filament	protein
KASH_CCD	PF14662.6	gi|84489674|ref|YP_447906.1|	-	0.002	18.0	31.7	0.012	15.4	13.3	2.2	1	1	1	2	2	2	2	Coiled-coil	region	of	CCDC155	or	KASH
TACC_C	PF05010.14	gi|84489674|ref|YP_447906.1|	-	0.0021	17.9	15.3	0.0021	17.9	15.3	2.7	1	1	2	3	3	3	2	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
FPP	PF05911.11	gi|84489674|ref|YP_447906.1|	-	0.0026	16.0	24.0	0.0032	15.7	24.0	1.0	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
She9_MDM33	PF05546.11	gi|84489674|ref|YP_447906.1|	-	0.0028	17.5	4.0	0.0028	17.5	4.0	2.8	1	1	3	4	4	4	1	She9	/	Mdm33	family
Lebercilin	PF15619.6	gi|84489674|ref|YP_447906.1|	-	0.0048	16.6	14.8	0.0048	16.6	14.8	2.4	1	1	1	2	2	2	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
MbeD_MobD	PF04899.12	gi|84489674|ref|YP_447906.1|	-	0.006	16.7	6.5	0.75	9.9	0.1	3.2	2	1	1	3	3	2	2	MbeD/MobD	like
Spectrin	PF00435.21	gi|84489674|ref|YP_447906.1|	-	0.011	16.2	23.3	0.29	11.7	5.0	3.3	1	1	2	3	3	3	0	Spectrin	repeat
CENP-F_leu_zip	PF10473.9	gi|84489674|ref|YP_447906.1|	-	0.012	15.6	24.3	0.012	15.6	24.3	2.8	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TSC22	PF01166.18	gi|84489674|ref|YP_447906.1|	-	0.015	15.5	23.7	0.28	11.5	2.3	4.6	1	1	4	5	5	4	0	TSC-22/dip/bun	family
Fmp27_WPPW	PF10359.9	gi|84489674|ref|YP_447906.1|	-	0.022	13.7	30.4	0.21	10.4	13.8	2.1	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
DUF4230	PF14014.6	gi|84489674|ref|YP_447906.1|	-	0.026	14.8	5.2	0.026	14.8	5.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4230)
bZIP_1	PF00170.21	gi|84489674|ref|YP_447906.1|	-	0.026	14.6	30.9	0.055	13.6	4.9	5.2	1	1	4	5	5	5	0	bZIP	transcription	factor
TMF_DNA_bd	PF12329.8	gi|84489674|ref|YP_447906.1|	-	0.028	14.4	10.0	0.028	14.4	10.0	3.8	1	1	1	3	3	2	0	TATA	element	modulatory	factor	1	DNA	binding
CLZ	PF16526.5	gi|84489674|ref|YP_447906.1|	-	0.029	14.7	20.1	0.044	14.1	2.4	3.5	1	1	2	3	3	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
ATG16	PF08614.11	gi|84489674|ref|YP_447906.1|	-	0.078	13.2	29.0	3	8.0	29.1	2.6	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
SOGA	PF11365.8	gi|84489674|ref|YP_447906.1|	-	0.082	14.0	25.1	2.1	9.5	14.8	4.2	1	1	2	3	3	3	0	Protein	SOGA
CENP-K	PF11802.8	gi|84489674|ref|YP_447906.1|	-	0.099	12.2	25.2	0.13	11.8	25.2	1.1	1	0	0	1	1	1	0	Centromere-associated	protein	K
WXG100	PF06013.12	gi|84489674|ref|YP_447906.1|	-	0.11	12.8	8.0	0.13	12.5	2.3	3.2	2	1	1	3	3	3	0	Proteins	of	100	residues	with	WXG
SHE3	PF17078.5	gi|84489674|ref|YP_447906.1|	-	0.12	12.1	39.0	1.1	8.9	34.7	3.1	1	1	1	2	2	2	0	SWI5-dependent	HO	expression	protein	3
DLP_helical	PF18709.1	gi|84489674|ref|YP_447906.1|	-	0.13	11.5	20.7	0.73	9.0	2.1	3.1	2	1	1	3	3	3	0	Dynamin-like	helical	domain
Phage_GP20	PF06810.11	gi|84489674|ref|YP_447906.1|	-	0.14	12.0	32.3	0.55	10.0	13.1	3.0	1	1	2	3	3	3	0	Phage	minor	structural	protein	GP20
Plasmid_RAQPRD	PF09686.10	gi|84489674|ref|YP_447906.1|	-	0.14	12.4	2.3	0.63	10.3	0.2	2.6	2	0	0	2	2	2	0	Plasmid	protein	of	unknown	function	(Plasmid_RAQPRD)
Mod_r	PF07200.13	gi|84489674|ref|YP_447906.1|	-	0.17	12.0	35.3	0.17	12.0	5.7	3.2	1	1	2	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
Ax_dynein_light	PF10211.9	gi|84489674|ref|YP_447906.1|	-	0.17	11.8	32.8	0.78	9.7	19.3	2.7	1	1	1	2	2	2	0	Axonemal	dynein	light	chain
DUF4763	PF15960.5	gi|84489674|ref|YP_447906.1|	-	0.17	11.2	25.2	0.04	13.2	5.2	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4763)
Taxilin	PF09728.9	gi|84489674|ref|YP_447906.1|	-	0.22	10.6	32.2	0.4	9.8	32.2	1.5	1	1	0	1	1	1	0	Myosin-like	coiled-coil	protein
SlyX	PF04102.12	gi|84489674|ref|YP_447906.1|	-	0.25	12.0	16.4	0.42	11.3	2.5	4.3	2	1	2	4	4	3	0	SlyX
Spc7	PF08317.11	gi|84489674|ref|YP_447906.1|	-	0.28	10.0	30.2	0.59	9.0	17.6	2.1	1	1	1	2	2	2	0	Spc7	kinetochore	protein
YabA	PF06156.13	gi|84489674|ref|YP_447906.1|	-	0.29	11.8	31.1	16	6.2	7.7	3.6	1	1	0	2	2	2	0	Initiation	control	protein	YabA
Nup88	PF10168.9	gi|84489674|ref|YP_447906.1|	-	0.3	8.9	22.2	0.37	8.5	22.2	1.1	1	0	0	1	1	1	0	Nuclear	pore	component
HAP1_N	PF04849.13	gi|84489674|ref|YP_447906.1|	-	0.33	10.1	30.2	0.039	13.2	22.1	2.2	1	1	1	2	2	2	0	HAP1	N-terminal	conserved	region
CCDC144C	PF14915.6	gi|84489674|ref|YP_447906.1|	-	0.38	9.8	34.9	0.26	10.3	14.0	2.4	1	1	1	2	2	2	0	CCDC144C	protein	coiled-coil	region
HALZ	PF02183.18	gi|84489674|ref|YP_447906.1|	-	0.46	10.7	26.6	1	9.7	0.2	5.4	4	1	1	5	5	4	0	Homeobox	associated	leucine	zipper
HIP1_clath_bdg	PF16515.5	gi|84489674|ref|YP_447906.1|	-	0.47	11.1	27.5	0.16	12.6	8.8	3.1	2	1	1	3	3	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
MscS_porin	PF12795.7	gi|84489674|ref|YP_447906.1|	-	0.49	9.9	28.7	0.83	9.2	5.8	2.3	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF812	PF05667.11	gi|84489674|ref|YP_447906.1|	-	0.51	9.2	27.4	1.3	7.9	27.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
BST2	PF16716.5	gi|84489674|ref|YP_447906.1|	-	0.58	10.8	22.9	0.45	11.1	12.6	2.9	1	1	1	2	2	2	0	Bone	marrow	stromal	antigen	2
Prefoldin_2	PF01920.20	gi|84489674|ref|YP_447906.1|	-	0.59	10.1	30.2	0.53	10.3	4.5	4.4	1	1	2	3	3	2	0	Prefoldin	subunit
DUF4472	PF14739.6	gi|84489674|ref|YP_447906.1|	-	0.6	10.9	26.6	1.2	9.9	11.5	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4472)
Laminin_I	PF06008.14	gi|84489674|ref|YP_447906.1|	-	0.63	9.7	28.9	2.8	7.6	28.6	2.1	1	1	1	2	2	2	0	Laminin	Domain	I
Macoilin	PF09726.9	gi|84489674|ref|YP_447906.1|	-	0.64	8.5	18.6	0.72	8.3	18.6	1.1	1	0	0	1	1	1	0	Macoilin	family
YvrJ	PF12841.7	gi|84489674|ref|YP_447906.1|	-	0.68	9.5	2.9	1.2	8.8	0.2	2.5	2	0	0	2	2	2	0	YvrJ	protein	family
zf-C4H2	PF10146.9	gi|84489674|ref|YP_447906.1|	-	0.85	9.9	30.7	0.027	14.8	13.6	2.5	1	1	1	2	2	1	0	Zinc	finger-containing	protein
DUF4407	PF14362.6	gi|84489674|ref|YP_447906.1|	-	0.88	8.9	21.2	2.6	7.3	21.1	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF1664	PF07889.12	gi|84489674|ref|YP_447906.1|	-	0.97	9.5	21.1	0.27	11.3	3.2	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Tho2	PF11262.8	gi|84489674|ref|YP_447906.1|	-	1	8.5	26.1	0.042	13.1	11.7	2.5	1	1	2	3	3	3	0	Transcription	factor/nuclear	export	subunit	protein	2
DUF724	PF05266.14	gi|84489674|ref|YP_447906.1|	-	1.1	9.1	26.0	0.16	11.7	7.3	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF724)
Fez1	PF06818.15	gi|84489674|ref|YP_447906.1|	-	1.1	9.7	26.1	0.55	10.6	10.2	2.1	1	1	1	2	2	2	0	Fez1
SpecificRecomb	PF10136.9	gi|84489674|ref|YP_447906.1|	-	1.1	7.4	3.9	1.4	7.1	3.9	1.3	1	0	0	1	1	1	0	Site-specific	recombinase
DHR10	PF18595.1	gi|84489674|ref|YP_447906.1|	-	1.3	9.1	26.5	1.4	9.0	19.9	3.9	1	1	3	4	4	4	0	Designed	helical	repeat	protein	10	domain
DUF2968	PF11180.8	gi|84489674|ref|YP_447906.1|	-	1.5	8.5	16.7	2.6	7.7	0.4	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
DivIC	PF04977.15	gi|84489674|ref|YP_447906.1|	-	1.8	8.4	35.3	0.063	13.1	4.2	4.8	2	1	4	6	6	5	0	Septum	formation	initiator
Troponin	PF00992.20	gi|84489674|ref|YP_447906.1|	-	1.9	8.8	24.3	9.3	6.6	15.3	2.4	1	1	1	2	2	2	0	Troponin
Tropomyosin_1	PF12718.7	gi|84489674|ref|YP_447906.1|	-	2	8.6	35.6	1.1	9.4	8.8	3.1	1	1	0	2	2	2	0	Tropomyosin	like
TMPIT	PF07851.13	gi|84489674|ref|YP_447906.1|	-	2	7.6	26.1	1.1	8.4	17.9	2.5	1	1	2	3	3	3	0	TMPIT-like	protein
Lectin_N	PF03954.14	gi|84489674|ref|YP_447906.1|	-	2.2	8.0	18.6	11	5.7	7.8	3.2	1	1	2	3	3	3	0	Hepatic	lectin,	N-terminal	domain
Cnn_1N	PF07989.11	gi|84489674|ref|YP_447906.1|	-	2.3	8.4	32.1	0.39	10.9	1.6	4.5	1	1	3	4	4	3	0	Centrosomin	N-terminal	motif	1
DUF4094	PF13334.6	gi|84489674|ref|YP_447906.1|	-	2.7	8.5	20.3	1	9.8	6.9	3.4	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4094)
Histone_HNS	PF00816.21	gi|84489674|ref|YP_447906.1|	-	2.7	8.8	8.4	0.2	12.5	1.4	2.3	2	0	0	2	2	2	0	H-NS	histone	family
Tup_N	PF08581.10	gi|84489674|ref|YP_447906.1|	-	2.9	8.3	30.1	1.2	9.5	6.6	3.7	1	1	3	4	4	4	0	Tup	N-terminal
XhlA	PF10779.9	gi|84489674|ref|YP_447906.1|	-	3	8.1	29.0	0.28	11.4	2.6	3.7	2	1	1	3	3	3	0	Haemolysin	XhlA
Golgin_A5	PF09787.9	gi|84489674|ref|YP_447906.1|	-	3.1	7.2	30.5	8.8	5.7	17.5	2.1	1	1	1	2	2	2	0	Golgin	subfamily	A	member	5
Phe_tRNA-synt_N	PF02912.18	gi|84489674|ref|YP_447906.1|	-	3.8	7.5	9.9	6.2	6.8	2.7	3.3	2	1	1	3	3	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
JIP_LZII	PF16471.5	gi|84489674|ref|YP_447906.1|	-	4.8	7.4	26.6	23	5.2	6.9	4.2	1	1	0	2	2	2	0	JNK-interacting	protein	leucine	zipper	II
Fungal_TACC	PF12709.7	gi|84489674|ref|YP_447906.1|	-	5.5	7.5	34.7	1.1	9.7	4.2	5.5	1	1	4	5	5	5	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
COG5	PF10392.9	gi|84489674|ref|YP_447906.1|	-	6.1	7.0	21.8	0.088	13.0	1.5	2.3	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
GIT_CC	PF16559.5	gi|84489674|ref|YP_447906.1|	-	6.3	6.7	30.4	0.6	10.0	1.3	5.1	2	2	3	5	5	5	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
ZnuA	PF01297.17	gi|84489674|ref|YP_447906.1|	-	7.3	5.9	15.2	12	5.2	5.8	2.4	1	1	1	2	2	2	0	Zinc-uptake	complex	component	A	periplasmic
CCDC-167	PF15188.6	gi|84489674|ref|YP_447906.1|	-	7.7	6.9	31.4	0.35	11.2	3.3	3.5	1	1	2	3	3	3	0	Coiled-coil	domain-containing	protein	167
IFT57	PF10498.9	gi|84489674|ref|YP_447906.1|	-	8	5.3	33.3	0.79	8.6	18.4	2.2	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
Dor1	PF04124.12	gi|84489674|ref|YP_447906.1|	-	8.8	4.9	24.4	1.3	7.7	11.1	2.2	1	1	1	2	2	2	0	Dor1-like	family
DUF4140	PF13600.6	gi|84489674|ref|YP_447906.1|	-	9.1	6.8	16.0	1.8e+04	-3.8	16.0	3.6	1	1	0	1	1	0	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF4795	PF16043.5	gi|84489674|ref|YP_447906.1|	-	9.5	5.8	33.6	0.81	9.2	12.2	3.3	1	1	2	3	3	2	0	Domain	of	unknown	function	(DUF4795)
ZapB	PF06005.12	gi|84489674|ref|YP_447906.1|	-	9.7	6.7	36.2	8.1	7.0	8.5	4.4	2	1	2	4	4	3	0	Cell	division	protein	ZapB
NUDIX	PF00293.28	gi|84489677|ref|YP_447909.1|	-	2.8e-18	66.2	0.0	4.6e-18	65.5	0.0	1.3	1	0	0	1	1	1	1	NUDIX	domain
zf-NADH-PPase	PF09297.11	gi|84489677|ref|YP_447909.1|	-	7.7e-11	41.5	0.5	1.2e-10	40.8	0.5	1.4	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
DZR	PF12773.7	gi|84489677|ref|YP_447909.1|	-	0.0012	18.9	0.3	0.0019	18.2	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|84489677|ref|YP_447909.1|	-	0.0019	18.1	0.2	0.0038	17.1	0.2	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF1451	PF07295.11	gi|84489677|ref|YP_447909.1|	-	0.0053	16.8	1.1	0.0082	16.2	0.4	1.6	2	0	0	2	2	2	1	Zinc-ribbon	containing	domain
HypA	PF01155.19	gi|84489677|ref|YP_447909.1|	-	0.012	15.7	0.0	0.024	14.6	0.0	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_RNApol_7kD	PF03604.13	gi|84489677|ref|YP_447909.1|	-	0.012	15.2	1.0	0.025	14.2	1.0	1.4	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.12	gi|84489677|ref|YP_447909.1|	-	0.017	14.6	0.7	0.038	13.5	0.7	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|84489677|ref|YP_447909.1|	-	0.018	15.2	0.5	0.031	14.4	0.5	1.3	1	0	0	1	1	1	0	Zinc	ribbon	domain
DUF4916	PF16262.5	gi|84489677|ref|YP_447909.1|	-	0.027	14.0	0.1	0.057	12.9	0.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4916)
NOB1_Zn_bind	PF08772.11	gi|84489677|ref|YP_447909.1|	-	0.034	14.3	0.9	0.32	11.2	1.0	2.2	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Nudix_N_2	PF14803.6	gi|84489677|ref|YP_447909.1|	-	0.14	12.1	3.6	1.1	9.2	3.6	2.2	1	1	0	1	1	1	0	Nudix	N-terminal
A2L_zn_ribbon	PF08792.10	gi|84489677|ref|YP_447909.1|	-	0.16	11.7	1.9	0.42	10.4	1.9	1.7	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|84489677|ref|YP_447909.1|	-	0.25	11.1	3.8	10	6.0	0.6	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4013	PF13197.6	gi|84489678|ref|YP_447910.1|	-	4.1e-22	78.8	38.6	4.1e-22	78.8	38.6	2.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4013)
DUF2627	PF11118.8	gi|84489678|ref|YP_447910.1|	-	0.018	15.6	1.0	0.018	15.6	1.0	4.0	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF2627)
KOW	PF00467.29	gi|84489679|ref|YP_447911.1|	-	0.001	19.0	4.1	0.0029	17.5	4.1	2.0	1	1	0	1	1	1	1	KOW	motif
UPF0728	PF15092.6	gi|84489679|ref|YP_447911.1|	-	0.045	13.6	0.2	0.05	13.4	0.2	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0728
Cytidylate_kin2	PF13189.6	gi|84489680|ref|YP_447912.1|	-	2.5e-21	76.6	3.0	6.2e-20	72.1	3.0	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|84489680|ref|YP_447912.1|	-	4.1e-14	53.2	0.1	7.3e-14	52.4	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|84489680|ref|YP_447912.1|	-	7.7e-14	51.9	4.5	4.3e-07	29.9	1.8	2.1	1	1	1	2	2	2	2	Cytidylate	kinase
AAA_17	PF13207.6	gi|84489680|ref|YP_447912.1|	-	8e-14	52.2	0.1	1.1e-13	51.8	0.1	1.1	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.22	gi|84489680|ref|YP_447912.1|	-	0.00034	20.8	0.2	0.0044	17.1	0.0	2.2	1	1	0	2	2	2	1	Adenylate	kinase
AAA_33	PF13671.6	gi|84489680|ref|YP_447912.1|	-	0.00047	20.3	0.3	0.0052	16.9	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.22	gi|84489680|ref|YP_447912.1|	-	0.0018	18.4	0.4	0.0041	17.2	0.4	1.5	1	1	0	1	1	1	1	Shikimate	kinase
CoaE	PF01121.20	gi|84489680|ref|YP_447912.1|	-	0.0094	15.6	1.4	0.1	12.3	0.1	2.1	1	1	1	2	2	2	1	Dephospho-CoA	kinase
ATP-synt_B	PF00430.18	gi|84489680|ref|YP_447912.1|	-	0.027	14.6	0.8	0.041	14.0	0.8	1.2	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
AAA_28	PF13521.6	gi|84489680|ref|YP_447912.1|	-	0.046	14.0	0.5	0.26	11.5	0.5	1.9	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|84489680|ref|YP_447912.1|	-	0.059	13.0	0.4	0.15	11.6	0.1	1.8	1	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Ribosomal_L34e	PF01199.18	gi|84489681|ref|YP_447913.1|	-	2.1e-24	85.6	6.8	2.2e-24	85.6	6.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
DZR	PF12773.7	gi|84489681|ref|YP_447913.1|	-	0.0031	17.5	0.3	0.0053	16.8	0.3	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|84489681|ref|YP_447913.1|	-	0.019	14.4	0.4	0.79	9.3	0.0	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|84489681|ref|YP_447913.1|	-	0.026	14.4	1.1	1.1	9.2	0.1	2.2	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.6	gi|84489681|ref|YP_447913.1|	-	0.035	13.8	2.3	3.8	7.4	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|84489681|ref|YP_447913.1|	-	0.035	14.0	2.5	2.1	8.3	0.1	2.2	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Tnp_zf-ribbon_2	PF13842.6	gi|84489681|ref|YP_447913.1|	-	0.067	14.0	3.9	0.32	11.8	0.1	2.4	2	0	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
zf_UBZ	PF18439.1	gi|84489681|ref|YP_447913.1|	-	0.092	12.4	0.9	2.5	7.7	0.1	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zf-LITAF-like	PF10601.9	gi|84489681|ref|YP_447913.1|	-	0.49	10.7	3.3	6.3	7.1	0.4	2.2	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
EMC3_TMCO1	PF01956.16	gi|84489682|ref|YP_447914.1|	-	8.1e-33	113.5	8.5	9.2e-33	113.4	8.5	1.0	1	0	0	1	1	1	1	Integral	membrane	protein	EMC3/TMCO1-like
60KD_IMP	PF02096.20	gi|84489682|ref|YP_447914.1|	-	0.0002	21.3	8.4	0.00025	21.0	8.4	1.1	1	0	0	1	1	1	1	60Kd	inner	membrane	protein
ABC_tran_CTD	PF16326.5	gi|84489682|ref|YP_447914.1|	-	0.015	15.6	3.0	0.021	15.0	3.0	1.2	1	0	0	1	1	1	0	ABC	transporter	C-terminal	domain
TssO	PF17561.2	gi|84489682|ref|YP_447914.1|	-	0.026	14.6	1.4	0.05	13.7	1.4	1.5	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssO
LapA_dom	PF06305.11	gi|84489682|ref|YP_447914.1|	-	0.037	13.9	1.8	0.46	10.3	0.2	2.6	2	0	0	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
OmpH	PF03938.14	gi|84489682|ref|YP_447914.1|	-	0.23	11.8	6.4	0.32	11.3	6.4	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF4834	PF16118.5	gi|84489682|ref|YP_447914.1|	-	1.2	10.1	9.7	3.3	8.7	0.1	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4834)
DPM3	PF08285.11	gi|84489682|ref|YP_447914.1|	-	3.4	7.9	10.8	2.5	8.4	0.1	3.0	2	1	1	3	3	3	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
AAA_17	PF13207.6	gi|84489683|ref|YP_447915.1|	-	1.1e-40	139.2	0.0	1.6e-40	138.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|84489683|ref|YP_447915.1|	-	1.9e-09	38.2	0.0	3.2e-09	37.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|84489683|ref|YP_447915.1|	-	0.00025	21.4	0.0	0.0036	17.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|84489683|ref|YP_447915.1|	-	0.0021	18.2	0.0	0.0083	16.3	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
Pyr_redox	PF00070.27	gi|84489683|ref|YP_447915.1|	-	0.0052	17.3	0.1	0.076	13.6	0.0	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NB-ARC	PF00931.22	gi|84489683|ref|YP_447915.1|	-	0.0089	15.2	0.0	0.012	14.8	0.0	1.2	1	0	0	1	1	1	1	NB-ARC	domain
AAA	PF00004.29	gi|84489683|ref|YP_447915.1|	-	0.023	15.1	0.0	0.048	14.1	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|84489683|ref|YP_447915.1|	-	0.032	14.5	0.0	0.076	13.3	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|84489683|ref|YP_447915.1|	-	0.039	13.2	0.2	0.24	10.7	0.2	2.1	1	1	0	1	1	1	0	Zeta	toxin
SRP54	PF00448.22	gi|84489683|ref|YP_447915.1|	-	0.056	13.1	0.3	0.33	10.6	0.3	2.0	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.15	gi|84489683|ref|YP_447915.1|	-	0.061	13.2	0.1	0.12	12.3	0.1	1.6	1	1	0	1	1	1	0	NTPase
KTI12	PF08433.10	gi|84489683|ref|YP_447915.1|	-	0.066	12.6	0.0	0.079	12.4	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_19	PF13245.6	gi|84489683|ref|YP_447915.1|	-	0.089	13.1	0.2	0.13	12.6	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
SecY	PF00344.20	gi|84489684|ref|YP_447916.1|	-	5.5e-71	239.3	23.1	7e-71	239.0	23.1	1.1	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.9	gi|84489684|ref|YP_447916.1|	-	2.9e-11	43.0	3.3	3e-11	42.9	1.3	2.2	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
RseC_MucC	PF04246.12	gi|84489684|ref|YP_447916.1|	-	0.14	12.1	0.1	0.14	12.1	0.1	3.1	4	0	0	4	4	4	0	Positive	regulator	of	sigma(E),	RseC/MucC
Ribosomal_L27A	PF00828.19	gi|84489685|ref|YP_447917.1|	-	7.6e-23	81.6	0.5	9.8e-23	81.2	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L30	PF00327.20	gi|84489686|ref|YP_447918.1|	-	4.4e-14	52.1	0.0	8.4e-14	51.2	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5	PF00333.20	gi|84489687|ref|YP_447919.1|	-	2.4e-24	85.1	1.9	6e-24	83.8	1.9	1.7	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.15	gi|84489687|ref|YP_447919.1|	-	7e-19	67.1	0.1	1.5e-18	66.0	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L5e	PF17144.4	gi|84489688|ref|YP_447920.1|	-	9e-31	107.1	1.7	4.8e-21	75.4	0.8	2.7	2	1	1	3	3	3	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18_c	PF14204.6	gi|84489688|ref|YP_447920.1|	-	1.5e-05	25.8	0.2	1.5e-05	25.8	0.2	1.9	2	0	0	2	2	2	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.20	gi|84489689|ref|YP_447921.1|	-	1.3e-56	190.7	9.4	1.4e-56	190.5	9.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Herpes_UL36	PF03586.13	gi|84489689|ref|YP_447921.1|	-	0.1	11.9	0.1	0.21	10.9	0.0	1.5	2	0	0	2	2	2	0	Herpesvirus	UL36	tegument	protein
Cnd1_N	PF12922.7	gi|84489689|ref|YP_447921.1|	-	0.12	12.3	2.5	5.6	6.8	0.0	2.1	1	1	1	2	2	2	0	non-SMC	mitotic	condensation	complex	subunit	1,	N-term
Ribosomal_L32e	PF01655.18	gi|84489690|ref|YP_447922.1|	-	9.5e-36	122.5	0.6	1.1e-35	122.3	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.23	gi|84489691|ref|YP_447923.1|	-	2.1e-28	98.8	14.0	7.2e-18	65.0	4.4	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
DNA_pol3_beta	PF00712.19	gi|84489691|ref|YP_447923.1|	-	0.027	14.6	0.7	23	5.1	0.0	3.1	2	1	1	3	3	3	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
Glyco_hydro_65C	PF03633.15	gi|84489691|ref|YP_447923.1|	-	0.04	13.8	3.9	55	3.8	0.1	4.0	3	1	1	4	4	4	0	Glycosyl	hydrolase	family	65,	C-terminal	domain
HSP20	PF00011.21	gi|84489691|ref|YP_447923.1|	-	0.07	13.3	6.1	3.2	7.9	0.1	3.3	3	1	0	3	3	3	0	Hsp20/alpha	crystallin	family
Peptidase_M60_C	PF18630.1	gi|84489691|ref|YP_447923.1|	-	0.33	11.1	8.2	15	5.8	0.5	4.0	3	1	1	4	4	4	0	Peptidase	M60	C-terminal	domain
Ribosomal_S8	PF00410.19	gi|84489692|ref|YP_447924.1|	-	3.7e-28	98.0	0.0	4.3e-28	97.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.21	gi|84489693|ref|YP_447925.1|	-	2e-11	43.5	4.5	2.1e-11	43.4	4.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
Zn_Tnp_IS91	PF14319.6	gi|84489693|ref|YP_447925.1|	-	0.041	13.9	0.8	0.041	13.9	0.8	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
DUF2039	PF10217.9	gi|84489693|ref|YP_447925.1|	-	0.13	12.7	3.0	0.44	10.9	0.1	1.9	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
Ribosomal_L5_C	PF00673.21	gi|84489694|ref|YP_447926.1|	-	1.8e-25	88.9	0.0	3.2e-25	88.1	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|84489694|ref|YP_447926.1|	-	1.2e-17	63.9	0.1	2.8e-17	62.8	0.1	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S4e	PF00900.20	gi|84489695|ref|YP_447927.1|	-	5.1e-24	84.0	0.8	9.5e-24	83.1	0.8	1.5	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.12	gi|84489695|ref|YP_447927.1|	-	2.1e-17	62.9	4.2	3.9e-17	62.1	4.2	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.25	gi|84489695|ref|YP_447927.1|	-	0.0016	18.2	0.0	0.0027	17.4	0.0	1.4	1	0	0	1	1	1	1	S4	domain
40S_S4_C	PF16121.5	gi|84489695|ref|YP_447927.1|	-	0.018	14.7	0.0	0.042	13.5	0.0	1.6	1	0	0	1	1	1	0	40S	ribosomal	protein	S4	C-terminus
tRNA_SAD	PF07973.14	gi|84489695|ref|YP_447927.1|	-	0.074	13.2	0.3	0.2	11.8	0.3	1.7	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Ribosomal_L26	PF16906.5	gi|84489696|ref|YP_447928.1|	-	2.3e-29	101.7	0.2	2.6e-29	101.5	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|84489696|ref|YP_447928.1|	-	4.8e-08	32.7	2.4	7.3e-08	32.1	2.4	1.3	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L14	PF00238.19	gi|84489697|ref|YP_447929.1|	-	2.1e-34	118.3	1.5	2.5e-34	118.0	1.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_S17	PF00366.20	gi|84489698|ref|YP_447930.1|	-	1.6e-24	85.8	1.7	1.6e-24	85.8	1.7	1.6	2	0	0	2	2	2	1	Ribosomal	protein	S17
Ribosomal_S17_N	PF16205.5	gi|84489698|ref|YP_447930.1|	-	0.019	15.3	0.2	0.058	13.8	0.0	1.9	2	0	0	2	2	2	0	Ribosomal_S17	N-terminal
DUF640	PF04852.12	gi|84489698|ref|YP_447930.1|	-	0.048	13.8	0.4	0.23	11.7	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF640)
UPF0086	PF01868.16	gi|84489699|ref|YP_447931.1|	-	5.5e-24	83.9	0.6	6.2e-24	83.7	0.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
SUI1	PF01253.22	gi|84489700|ref|YP_447932.1|	-	1.1e-19	70.7	1.5	1.4e-19	70.4	1.5	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.14	gi|84489700|ref|YP_447932.1|	-	2.1e-05	24.7	0.2	3e-05	24.2	0.2	1.3	1	0	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DTW	PF03942.15	gi|84489700|ref|YP_447932.1|	-	0.035	13.8	1.4	0.049	13.3	1.4	1.2	1	0	0	1	1	1	0	DTW	domain
Ribosomal_L29	PF00831.23	gi|84489701|ref|YP_447933.1|	-	3.2e-16	59.0	0.0	3.7e-16	58.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF4314	PF14192.6	gi|84489701|ref|YP_447933.1|	-	0.045	13.7	0.0	0.063	13.2	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4314)
Ribosomal_S3_C	PF00189.20	gi|84489702|ref|YP_447934.1|	-	1.1e-20	73.9	1.8	2.4e-20	72.8	1.8	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|84489702|ref|YP_447934.1|	-	5.7e-16	58.1	1.1	9.4e-16	57.4	0.1	1.9	2	0	0	2	2	2	1	KH	domain
KH_4	PF13083.6	gi|84489702|ref|YP_447934.1|	-	0.0058	16.5	1.8	0.011	15.6	0.0	2.3	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.29	gi|84489702|ref|YP_447934.1|	-	0.0087	15.9	0.3	0.14	12.0	0.0	2.6	2	0	0	2	2	2	1	KH	domain
DisA-linker	PF10635.9	gi|84489702|ref|YP_447934.1|	-	0.15	11.9	0.1	0.15	11.9	0.1	2.2	2	0	0	2	2	2	0	DisA	bacterial	checkpoint	controller	linker	region
DUF433	PF04255.14	gi|84489702|ref|YP_447934.1|	-	0.23	11.3	1.9	9	6.2	0.6	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF433)
Ribosomal_L22	PF00237.19	gi|84489703|ref|YP_447935.1|	-	2.6e-30	104.7	0.0	3.2e-30	104.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.21	gi|84489704|ref|YP_447936.1|	-	6.9e-31	106.0	0.1	8.9e-31	105.6	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.18	gi|84489705|ref|YP_447937.1|	-	4.5e-45	152.9	1.1	7.4e-45	152.2	1.1	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|84489705|ref|YP_447937.1|	-	1.3e-20	73.1	0.0	4.7e-20	71.3	0.0	2.0	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.20	gi|84489706|ref|YP_447938.1|	-	3.8e-14	52.8	0.8	5.2e-14	52.4	0.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L23
RNA_pol_Rpc82	PF05645.13	gi|84489706|ref|YP_447938.1|	-	0.11	12.2	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82
Ribosomal_L4	PF00573.22	gi|84489707|ref|YP_447939.1|	-	9.1e-47	159.2	0.2	1e-46	159.0	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
DUF2149	PF09919.9	gi|84489707|ref|YP_447939.1|	-	0.1	12.8	0.5	0.24	11.7	0.4	1.7	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2149)
Ribosomal_L3	PF00297.22	gi|84489708|ref|YP_447940.1|	-	6.3e-93	311.7	0.3	9.8e-93	311.1	0.3	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L3
Methyltrn_RNA_3	PF02598.17	gi|84489709|ref|YP_447941.1|	-	5.8e-57	193.4	0.0	6.8e-57	193.2	0.0	1.0	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
SPOUT_MTase_2	PF14419.6	gi|84489709|ref|YP_447941.1|	-	0.0017	17.7	0.0	0.0029	17.0	0.0	1.3	1	0	0	1	1	1	1	AF2226-like	SPOUT	RNA	Methylase	fused	to	THUMP
HydF_dimer	PF18128.1	gi|84489709|ref|YP_447941.1|	-	0.062	13.4	0.0	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	Hydrogen	maturase	F	dimerization	domain
Big_3_5	PF16640.5	gi|84489710|ref|YP_447942.1|	-	5.4e-09	36.1	1.0	5.4e-09	36.1	1.0	9.5	8	2	1	9	9	9	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489710|ref|YP_447942.1|	-	0.0037	17.3	1.1	0.0037	17.3	1.1	11.3	10	2	3	13	13	13	2	Bacterial	Ig-like	domain	(group	1)
DUF3426	PF11906.8	gi|84489710|ref|YP_447942.1|	-	0.049	13.8	0.7	0.21	11.8	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3426)
DUF4797	PF16051.5	gi|84489710|ref|YP_447942.1|	-	0.14	12.1	0.7	0.6	10.1	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4797)
Ribosomal_L19	PF01245.20	gi|84489710|ref|YP_447942.1|	-	0.56	10.2	6.4	4	7.4	0.2	4.3	3	0	0	3	3	3	0	Ribosomal	protein	L19
Big_3_5	PF16640.5	gi|84489711|ref|YP_447943.1|	-	3.5e-07	30.3	10.6	5.5e-07	29.7	3.9	10.3	11	0	0	11	11	11	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489711|ref|YP_447943.1|	-	0.0054	16.7	0.2	0.0054	16.7	0.2	8.6	8	1	1	9	9	9	2	Bacterial	Ig-like	domain	(group	1)
DUF824	PF05688.11	gi|84489711|ref|YP_447943.1|	-	3.9	7.4	13.3	0.37	10.6	0.1	4.4	4	0	0	4	4	4	0	Salmonella	repeat	of	unknown	function	(DUF824)
Beta_helix	PF13229.6	gi|84489712|ref|YP_447944.1|	-	0.0012	18.7	99.1	0.0028	17.5	45.7	10.7	2	2	8	10	10	10	3	Right	handed	beta	helix	region
Hexapep	PF00132.24	gi|84489712|ref|YP_447944.1|	-	0.12	12.1	16.0	0.25	11.2	0.8	7.3	6	0	0	6	6	6	0	Bacterial	transferase	hexapeptide	(six	repeats)
DUF824	PF05688.11	gi|84489712|ref|YP_447944.1|	-	2.4	8.1	9.7	0.77	9.6	0.0	3.9	3	0	0	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
CPSase_L_D2	PF02786.17	gi|84489713|ref|YP_447945.1|	-	5e-85	284.3	0.5	7.5e-85	283.7	0.5	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_C	PF02785.19	gi|84489713|ref|YP_447945.1|	-	8.6e-42	141.6	0.0	2e-41	140.5	0.0	1.7	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
Biotin_carb_N	PF00289.22	gi|84489713|ref|YP_447945.1|	-	2.4e-41	140.7	0.0	1.5e-40	138.1	0.0	2.3	2	0	0	2	2	2	1	Biotin	carboxylase,	N-terminal	domain
Dala_Dala_lig_C	PF07478.13	gi|84489713|ref|YP_447945.1|	-	2.3e-12	46.9	0.1	5.9e-12	45.6	0.1	1.7	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.14	gi|84489713|ref|YP_447945.1|	-	1e-09	38.6	0.1	1.9e-09	37.7	0.1	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|84489713|ref|YP_447945.1|	-	2.5e-08	33.7	0.1	5.5e-08	32.6	0.1	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|84489713|ref|YP_447945.1|	-	5.7e-08	32.6	0.5	2.8e-07	30.3	0.1	2.3	2	1	0	2	2	2	1	RimK-like	ATP-grasp	domain
GARS_A	PF01071.19	gi|84489713|ref|YP_447945.1|	-	1.2e-06	28.4	1.3	2.8e-06	27.3	0.2	2.1	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATPgrasp_Ter	PF15632.6	gi|84489713|ref|YP_447945.1|	-	0.0026	17.5	0.0	0.006	16.3	0.0	1.6	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
DUF2529	PF10740.9	gi|84489713|ref|YP_447945.1|	-	0.0041	16.8	0.1	0.27	10.9	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF2529)
ATP-grasp_4	PF13535.6	gi|84489713|ref|YP_447945.1|	-	0.0083	15.7	0.1	0.035	13.7	0.0	2.1	1	1	1	2	2	2	1	ATP-grasp	domain
ATP-grasp_5	PF13549.6	gi|84489713|ref|YP_447945.1|	-	0.015	14.8	0.0	0.03	13.8	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
BPL_C	PF02237.17	gi|84489714|ref|YP_447946.1|	-	8.3e-09	35.2	0.4	2e-08	34.0	0.4	1.6	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
BPL_LplA_LipB_2	PF16917.5	gi|84489714|ref|YP_447946.1|	-	3.3e-08	33.3	0.0	4.1e-08	33.0	0.0	1.1	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_LplA_LipB	PF03099.19	gi|84489714|ref|YP_447946.1|	-	1.1e-07	31.8	0.1	1.7e-07	31.2	0.1	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Cys_Met_Meta_PP	PF01053.20	gi|84489715|ref|YP_447947.1|	-	1.3e-08	33.8	0.1	2.2e-08	33.1	0.1	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|84489715|ref|YP_447947.1|	-	4.9e-06	25.8	0.4	1.1e-05	24.5	0.4	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|84489715|ref|YP_447947.1|	-	1.2e-05	24.6	0.0	3e-05	23.4	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
SelA	PF03841.13	gi|84489715|ref|YP_447947.1|	-	0.0001	21.5	0.1	0.00014	21.0	0.1	1.2	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
SpoU_methylase	PF00588.19	gi|84489715|ref|YP_447947.1|	-	0.0094	16.1	0.0	0.023	14.9	0.0	1.5	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Beta_elim_lyase	PF01212.21	gi|84489715|ref|YP_447947.1|	-	0.033	13.5	0.0	0.049	12.9	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Polysacc_synt	PF01943.17	gi|84489717|ref|YP_447949.1|	-	1.7e-32	112.9	27.9	1.7e-32	112.9	27.9	3.0	1	1	2	3	3	3	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|84489717|ref|YP_447949.1|	-	1.3e-28	99.9	49.2	1.2e-26	93.5	25.1	4.5	5	1	0	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
MurJ	PF03023.14	gi|84489717|ref|YP_447949.1|	-	9.1e-23	80.6	43.0	6.7e-21	74.4	35.3	2.2	1	1	1	2	2	2	2	Lipid	II	flippase	MurJ
Polysacc_synt_3	PF13440.6	gi|84489717|ref|YP_447949.1|	-	4.2e-22	78.7	17.5	4.2e-22	78.7	17.5	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MatE	PF01554.18	gi|84489717|ref|YP_447949.1|	-	1.3e-15	57.4	35.9	2.4e-11	43.5	14.8	3.6	3	2	0	3	3	3	2	MatE
ATP-grasp_5	PF13549.6	gi|84489718|ref|YP_447950.1|	-	2.5e-73	246.2	0.2	3.7e-73	245.7	0.2	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|84489718|ref|YP_447950.1|	-	1.6e-56	189.9	0.5	8.4e-56	187.6	0.4	2.1	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|84489718|ref|YP_447950.1|	-	2.7e-22	79.5	0.3	6.3e-21	75.0	0.0	3.1	2	1	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|84489718|ref|YP_447950.1|	-	1.3e-13	51.4	0.3	6e-13	49.3	0.3	2.3	1	0	0	1	1	1	1	CoA	binding	domain
Aldedh	PF00171.22	gi|84489718|ref|YP_447950.1|	-	0.0029	16.2	0.1	0.005	15.4	0.1	1.3	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
ATP-grasp_2	PF08442.10	gi|84489718|ref|YP_447950.1|	-	0.02	14.4	0.2	0.039	13.5	0.2	1.5	1	0	0	1	1	1	0	ATP-grasp	domain
HHH_5	PF14520.6	gi|84489718|ref|YP_447950.1|	-	0.037	14.6	0.1	0.19	12.4	0.1	2.2	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
CPSase_L_D2	PF02786.17	gi|84489718|ref|YP_447950.1|	-	0.048	13.2	2.1	0.056	12.9	0.3	1.9	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Tex_N	PF09371.10	gi|84489719|ref|YP_447951.1|	-	5.7e-66	221.6	9.5	8.8e-66	221.0	7.5	2.2	2	0	0	2	2	2	1	Tex-like	protein	N-terminal	domain
Tex_YqgF	PF16921.5	gi|84489719|ref|YP_447951.1|	-	1.7e-56	190.1	0.1	4e-56	188.9	0.1	1.7	1	0	0	1	1	1	1	Tex	protein	YqgF-like	domain
HHH_3	PF12836.7	gi|84489719|ref|YP_447951.1|	-	5.7e-28	97.0	0.0	1.6e-27	95.5	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_9	PF17674.1	gi|84489719|ref|YP_447951.1|	-	2.2e-18	66.9	0.0	1.6e-17	64.2	0.0	2.6	1	0	0	1	1	1	1	HHH	domain
S1	PF00575.23	gi|84489719|ref|YP_447951.1|	-	5.3e-18	65.1	4.0	1.4e-17	63.8	4.0	1.8	1	0	0	1	1	1	1	S1	RNA	binding	domain
YqgF	PF14639.6	gi|84489719|ref|YP_447951.1|	-	3.2e-08	33.5	1.0	1.6e-07	31.2	0.1	2.5	2	0	0	2	2	2	1	Holliday-junction	resolvase-like	of	SPT6
HHH_7	PF14635.6	gi|84489719|ref|YP_447951.1|	-	2.4e-06	27.8	0.5	2e-05	24.9	0.0	2.7	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|84489719|ref|YP_447951.1|	-	7.8e-05	22.3	0.0	0.024	14.5	0.0	3.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|84489719|ref|YP_447951.1|	-	0.00025	21.6	0.2	0.11	13.2	0.0	3.6	2	1	1	3	3	3	1	Helix-hairpin-helix	domain
HHH_6	PF14579.6	gi|84489719|ref|YP_447951.1|	-	0.089	13.1	0.1	1.1	9.5	0.0	2.8	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
DUF5611	PF18446.1	gi|84489719|ref|YP_447951.1|	-	1.1	10.1	5.3	2	9.3	0.8	3.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF5611)
PGA_cap	PF09587.10	gi|84489720|ref|YP_447952.1|	-	3.1e-69	233.3	0.5	3.8e-69	233.0	0.5	1.1	1	0	0	1	1	1	1	Bacterial	capsule	synthesis	protein	PGA_cap
Hydrolase_6	PF13344.6	gi|84489720|ref|YP_447952.1|	-	0.1	12.7	0.3	0.9	9.7	0.0	2.6	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
DUF1471	PF07338.13	gi|84489720|ref|YP_447952.1|	-	0.17	11.9	0.6	0.87	9.6	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1471)
Big_3_5	PF16640.5	gi|84489721|ref|YP_447953.1|	-	3.4e-22	78.4	78.9	3.2e-07	30.4	1.4	9.1	9	0	0	9	9	9	7	Bacterial	Ig-like	domain	(group	3)
5_nucleotid	PF05761.14	gi|84489721|ref|YP_447953.1|	-	0.00013	21.0	10.9	0.07	12.0	0.1	4.0	4	0	0	4	4	4	3	5'	nucleotidase	family
DUF4399	PF14347.6	gi|84489721|ref|YP_447953.1|	-	0.0053	17.1	0.0	5.9	7.3	0.0	4.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4399)
Chlam_PMP	PF02415.17	gi|84489721|ref|YP_447953.1|	-	0.017	15.6	2.8	0.017	15.6	2.8	8.0	7	1	0	7	7	7	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
NifZ	PF04319.13	gi|84489721|ref|YP_447953.1|	-	0.022	14.5	0.4	9.6	6.1	0.1	2.8	2	0	0	2	2	2	0	NifZ	domain
CarboxypepD_reg	PF13620.6	gi|84489721|ref|YP_447953.1|	-	0.34	11.2	22.6	0.8	10.0	0.1	6.6	7	1	0	7	7	7	0	Carboxypeptidase	regulatory-like	domain
BBS2_Mid	PF14783.6	gi|84489721|ref|YP_447953.1|	-	0.46	10.6	9.0	10	6.2	0.2	4.2	4	0	0	4	4	4	0	Ciliary	BBSome	complex	subunit	2,	middle	region
Cuticle_1	PF08140.11	gi|84489721|ref|YP_447953.1|	-	5.3	7.2	6.0	13	5.9	0.6	2.7	2	0	0	2	2	2	0	Crustacean	cuticle	protein	repeat
Glycoprot_B_PH2	PF17417.2	gi|84489721|ref|YP_447953.1|	-	9.1	6.7	14.9	3.6	8.0	0.2	3.9	4	0	0	4	4	4	0	Herpesvirus	Glycoprotein	B	PH-like	domain
tRNA-synt_1c	PF00749.21	gi|84489722|ref|YP_447954.1|	-	1.3e-82	277.2	0.4	1.3e-82	277.2	0.4	1.5	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|84489722|ref|YP_447954.1|	-	1.3e-31	109.8	1.1	1.9e-31	109.3	0.2	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
EF-G-binding_N	PF07299.11	gi|84489722|ref|YP_447954.1|	-	0.05	14.1	0.1	0.18	12.4	0.1	1.9	1	0	0	1	1	1	0	Elongation	factor	G-binding	protein,	N-terminal
Aminotran_1_2	PF00155.21	gi|84489723|ref|YP_447955.1|	-	7.2e-31	107.7	0.0	1.8e-30	106.4	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|84489723|ref|YP_447955.1|	-	0.16	10.9	0.0	0.25	10.3	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class-V
MFS_1	PF07690.16	gi|84489724|ref|YP_447956.1|	-	6.2e-47	160.2	49.9	1.8e-31	109.3	27.4	2.7	2	1	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|84489724|ref|YP_447956.1|	-	1.7e-10	40.4	35.9	1.1e-09	37.7	15.4	2.9	3	1	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|84489724|ref|YP_447956.1|	-	3.3e-05	22.9	32.5	0.00011	21.2	9.2	3.3	2	1	1	3	3	3	2	MFS_1	like	family
EamA	PF00892.20	gi|84489724|ref|YP_447956.1|	-	0.00037	20.7	4.6	0.00037	20.7	4.6	6.0	3	1	1	5	5	5	1	EamA-like	transporter	family
PMP22_Claudin	PF00822.20	gi|84489724|ref|YP_447956.1|	-	0.033	14.1	0.3	0.033	14.1	0.3	4.4	4	1	0	4	4	4	0	PMP-22/EMP/MP20/Claudin	family
HTH_45	PF14947.6	gi|84489725|ref|YP_447957.1|	-	0.0063	16.5	0.4	0.0063	16.5	0.4	2.0	2	1	0	2	2	2	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.6	gi|84489725|ref|YP_447957.1|	-	0.03	14.3	0.0	0.057	13.4	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
FumaraseC_C	PF10415.9	gi|84489725|ref|YP_447957.1|	-	0.051	14.0	0.0	0.12	12.8	0.0	1.6	1	0	0	1	1	1	0	Fumarase	C	C-terminus
Styelin	PF17562.2	gi|84489725|ref|YP_447957.1|	-	0.17	12.3	1.1	0.36	11.2	1.1	1.5	1	0	0	1	1	1	0	Styelin
DUF4342	PF14242.6	gi|84489726|ref|YP_447958.1|	-	0.21	11.6	2.0	0.28	11.2	2.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4342)
MTES_1575	PF18741.1	gi|84489728|ref|YP_447960.1|	-	2.3e-36	123.8	0.0	8.6e-36	122.0	0.0	2.1	1	0	0	1	1	1	1	REase_MTES_1575
AAA_11	PF13086.6	gi|84489728|ref|YP_447960.1|	-	5.1e-18	65.8	2.1	1e-09	38.6	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
AAA_12	PF13087.6	gi|84489728|ref|YP_447960.1|	-	3.7e-15	56.1	0.1	3.7e-15	56.1	0.1	3.4	3	1	0	3	3	2	1	AAA	domain
AAA_19	PF13245.6	gi|84489728|ref|YP_447960.1|	-	8.7e-09	35.9	0.0	1.3e-05	25.5	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_30	PF13604.6	gi|84489728|ref|YP_447960.1|	-	1.7e-06	27.9	0.0	0.0017	18.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF3320	PF11784.8	gi|84489728|ref|YP_447960.1|	-	0.00074	19.4	0.0	0.0017	18.3	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3320)
Viral_helicase1	PF01443.18	gi|84489728|ref|YP_447960.1|	-	0.00084	19.1	1.6	0.78	9.4	0.0	3.1	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
DUF2075	PF09848.9	gi|84489728|ref|YP_447960.1|	-	0.0013	18.0	4.7	0.026	13.8	0.0	4.1	4	0	0	4	4	4	1	Uncharacterized	conserved	protein	(DUF2075)
DUF559	PF04480.12	gi|84489728|ref|YP_447960.1|	-	0.0021	17.9	0.3	0.045	13.6	0.0	3.0	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF559)
Helicase_RecD	PF05127.14	gi|84489728|ref|YP_447960.1|	-	0.003	17.4	0.0	0.18	11.7	0.0	2.6	2	0	0	2	2	2	1	Helicase
ResIII	PF04851.15	gi|84489728|ref|YP_447960.1|	-	0.0033	17.5	0.3	0.0033	17.5	0.3	4.8	5	1	0	5	5	5	1	Type	III	restriction	enzyme,	res	subunit
RAP	PF08373.10	gi|84489728|ref|YP_447960.1|	-	0.009	16.1	0.6	0.15	12.2	0.1	3.5	2	0	0	2	2	2	1	RAP	domain
IstB_IS21	PF01695.17	gi|84489728|ref|YP_447960.1|	-	0.028	14.1	0.0	0.077	12.7	0.0	1.7	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.21	gi|84489728|ref|YP_447960.1|	-	0.044	13.2	0.0	0.092	12.1	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
FtsK_SpoIIIE	PF01580.18	gi|84489728|ref|YP_447960.1|	-	0.049	13.0	0.0	0.27	10.5	0.0	2.1	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
P16-Arc	PF04699.14	gi|84489728|ref|YP_447960.1|	-	0.059	13.9	0.4	2.3	8.7	0.0	3.0	3	0	0	3	3	2	0	ARP2/3	complex	16	kDa	subunit	(p16-Arc)
T2SSE	PF00437.20	gi|84489728|ref|YP_447960.1|	-	0.06	12.4	0.0	0.25	10.4	0.0	2.0	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|84489728|ref|YP_447960.1|	-	0.061	13.6	0.1	0.42	10.9	0.0	2.5	3	0	0	3	3	2	0	AAA	domain
AAA_18	PF13238.6	gi|84489728|ref|YP_447960.1|	-	0.07	13.7	0.1	1.4	9.4	0.0	3.3	2	0	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|84489728|ref|YP_447960.1|	-	0.082	12.8	0.0	0.67	9.8	0.0	2.7	2	0	0	2	2	1	0	RsgA	GTPase
RNA_helicase	PF00910.22	gi|84489728|ref|YP_447960.1|	-	0.12	12.7	2.2	1.3	9.4	0.0	3.8	4	0	0	4	4	2	0	RNA	helicase
AAA_16	PF13191.6	gi|84489728|ref|YP_447960.1|	-	0.14	12.5	0.0	0.46	10.8	0.0	1.9	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_28	PF13521.6	gi|84489728|ref|YP_447960.1|	-	0.16	12.2	0.0	20	5.4	0.0	2.8	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.6	gi|84489728|ref|YP_447960.1|	-	0.29	11.2	4.8	0.51	10.4	0.1	3.8	3	0	0	3	3	3	0	AAA	domain
DUF4011	PF13195.6	gi|84489729|ref|YP_447961.1|	-	2.1e-48	164.3	4.5	3.5e-48	163.6	4.5	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4011)
Flavin_Reduct	PF01613.18	gi|84489730|ref|YP_447962.1|	-	7.8e-21	74.7	0.0	9.7e-21	74.4	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
FUSC_2	PF13515.6	gi|84489731|ref|YP_447963.1|	-	9.2e-07	29.0	13.3	9.2e-07	29.0	13.3	3.1	2	1	1	3	3	3	1	Fusaric	acid	resistance	protein-like
ALMT	PF11744.8	gi|84489731|ref|YP_447963.1|	-	1.2	7.9	16.8	0.91	8.3	11.7	2.8	1	1	2	3	3	3	0	Aluminium	activated	malate	transporter
DUF2120	PF09893.9	gi|84489731|ref|YP_447963.1|	-	1.9	8.6	7.6	0.45	10.6	1.7	2.6	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF1616	PF07760.11	gi|84489732|ref|YP_447964.1|	-	1.2	8.5	2.8	1.6	8.0	2.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1616)
DUF2085	PF09858.9	gi|84489733|ref|YP_447965.1|	-	5.2e-32	110.2	3.3	6.3e-32	109.9	3.3	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2085)
DUF4199	PF13858.6	gi|84489733|ref|YP_447965.1|	-	0.0073	16.7	7.6	0.0094	16.4	7.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4199)
DUF4400	PF14348.6	gi|84489733|ref|YP_447965.1|	-	0.078	12.5	0.1	0.12	11.9	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4400)
DUF2537	PF10801.8	gi|84489733|ref|YP_447965.1|	-	0.089	13.0	1.7	0.12	12.6	1.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2537)
DUF1700	PF08006.11	gi|84489733|ref|YP_447965.1|	-	0.38	10.3	4.2	0.49	9.9	4.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF4284	PF14112.6	gi|84489736|ref|YP_447968.1|	-	0.024	15.6	4.2	0.032	15.2	4.2	1.2	1	0	0	1	1	1	0	Immunity	protein	22
Myb_DNA-bind_7	PF15963.5	gi|84489736|ref|YP_447968.1|	-	0.17	11.8	6.7	0.23	11.3	6.1	1.6	1	1	0	1	1	1	0	Myb	DNA-binding	like
RNase_J_C	PF17770.1	gi|84489736|ref|YP_447968.1|	-	0.42	11.7	4.0	0.44	11.6	0.4	2.4	1	1	0	2	2	2	0	Ribonuclease	J	C-terminal	domain
HAND	PF09110.11	gi|84489736|ref|YP_447968.1|	-	0.44	11.3	6.8	0.65	10.8	6.8	1.3	1	0	0	1	1	1	0	HAND
FpoO	PF10621.9	gi|84489739|ref|YP_447971.1|	-	0.24	11.7	0.5	0.63	10.4	0.3	1.8	2	0	0	2	2	2	0	F420H2	dehydrogenase	subunit	FpoO
Cas_Cas7	PF05107.12	gi|84489740|ref|YP_447972.1|	-	3.3e-48	164.5	3.5	3.9e-48	164.2	3.5	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	Cas7
Spo0A_C	PF08769.11	gi|84489740|ref|YP_447972.1|	-	0.034	14.2	0.1	0.082	13.0	0.1	1.6	1	0	0	1	1	1	0	Sporulation	initiation	factor	Spo0A	C	terminal
DNTTIP1_dimer	PF18192.1	gi|84489740|ref|YP_447972.1|	-	3.5	8.0	6.7	6.9	7.1	1.4	3.0	3	0	0	3	3	3	0	DNTTIP1	dimerisation	domain
Cas_Cas5d	PF09704.10	gi|84489741|ref|YP_447973.1|	-	5.1e-07	29.8	0.0	1.5e-06	28.2	0.0	1.7	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DEAD	PF00270.29	gi|84489742|ref|YP_447974.1|	-	7.9e-11	42.0	2.0	7.6e-10	38.8	0.0	3.0	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
HD_6	PF18019.1	gi|84489742|ref|YP_447974.1|	-	3.3e-10	40.4	0.0	5.8e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	HD	domain
ResIII	PF04851.15	gi|84489742|ref|YP_447974.1|	-	2.5e-09	37.4	0.1	2.5e-09	37.4	0.1	3.7	4	2	1	5	5	5	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|84489742|ref|YP_447974.1|	-	1.2e-06	28.8	0.5	1.2e-06	28.8	0.5	3.8	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
PhoH	PF02562.16	gi|84489742|ref|YP_447974.1|	-	0.0001	21.8	0.0	0.016	14.6	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
HD	PF01966.22	gi|84489742|ref|YP_447974.1|	-	0.0049	17.1	0.3	0.018	15.3	0.1	2.2	2	0	0	2	2	2	1	HD	domain
Cas_Cas6	PF01881.16	gi|84489743|ref|YP_447975.1|	-	2e-35	122.5	5.0	2e-35	122.5	5.0	1.8	2	0	0	2	2	2	1	CRISPR	associated	protein	Cas6
CRISPR_Cas6	PF10040.9	gi|84489743|ref|YP_447975.1|	-	0.011	16.4	0.0	0.022	15.4	0.0	1.6	1	1	0	1	1	1	0	CRISPR-associated	endoribonuclease	Cas6
T4_Gp59_N	PF08993.10	gi|84489743|ref|YP_447975.1|	-	0.75	10.2	5.3	0.18	12.2	1.2	2.0	2	1	0	2	2	2	0	T4	gene	Gp59	loader	of	gp41	DNA	helicase
Cas_Cas4	PF01930.17	gi|84489744|ref|YP_447976.1|	-	3.7e-58	196.2	11.4	4.1e-58	196.1	11.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|84489744|ref|YP_447976.1|	-	2.3e-06	27.7	2.3	2.3e-06	27.7	2.3	1.3	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Erp_C	PF06780.11	gi|84489744|ref|YP_447976.1|	-	0.00049	20.1	5.1	0.00049	20.1	5.1	2.0	2	0	0	2	2	2	1	Erp	protein	C-terminus
NAD_binding_5	PF07994.12	gi|84489744|ref|YP_447976.1|	-	0.35	10.2	3.5	0.39	10.1	3.5	1.1	1	0	0	1	1	1	0	Myo-inositol-1-phosphate	synthase
CutA1	PF03091.15	gi|84489744|ref|YP_447976.1|	-	0.86	9.5	6.4	0.25	11.2	1.7	2.2	1	1	1	2	2	2	0	CutA1	divalent	ion	tolerance	protein
Cas_Cas1	PF01867.16	gi|84489745|ref|YP_447977.1|	-	3.5e-88	295.4	5.7	4.2e-88	295.2	5.7	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
YokU	PF14122.6	gi|84489745|ref|YP_447977.1|	-	0.13	12.2	1.3	3.4	7.7	0.0	3.1	3	0	0	3	3	3	0	YokU-like	protein,	putative	antitoxin
CRISPR_Cas2	PF09827.9	gi|84489746|ref|YP_447978.1|	-	2e-23	82.4	0.5	2.4e-23	82.1	0.5	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
DUF835	PF05763.12	gi|84489746|ref|YP_447978.1|	-	0.0034	17.1	0.6	0.0043	16.8	0.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
GnHR_trans	PF12369.8	gi|84489751|ref|YP_447983.1|	-	0.011	16.5	3.6	42	5.1	0.3	4.0	4	0	0	4	4	4	0	Gonadotropin	hormone	receptor	transmembrane	region
RVP_2	PF08284.11	gi|84489752|ref|YP_447984.1|	-	0.15	11.8	1.3	0.29	10.9	1.3	1.6	1	1	0	1	1	1	0	Retroviral	aspartyl	protease
RRT14	PF17075.5	gi|84489755|ref|YP_447987.1|	-	0.0015	18.7	4.0	0.0017	18.5	4.0	1.0	1	0	0	1	1	1	1	Regular	of	rDNA	transcription	protein	14
VAPB_antitox	PF02697.14	gi|84489755|ref|YP_447987.1|	-	0.084	13.7	0.8	0.084	13.7	0.8	1.9	2	1	0	2	2	2	0	Putative	antitoxin
ParE_toxin	PF05016.15	gi|84489756|ref|YP_447988.1|	-	1.5e-05	25.5	0.1	1.9e-05	25.2	0.1	1.2	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
POTRA	PF07244.15	gi|84489756|ref|YP_447988.1|	-	0.057	14.0	0.0	0.072	13.7	0.0	1.2	1	0	0	1	1	1	0	Surface	antigen	variable	number	repeat
ABC_tran	PF00005.27	gi|84489757|ref|YP_447989.1|	-	2.2e-33	115.7	0.0	5.6e-33	114.4	0.0	1.7	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489757|ref|YP_447989.1|	-	3.8e-13	49.9	0.1	1.2e-06	28.5	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|84489757|ref|YP_447989.1|	-	1e-09	38.1	0.1	8.4e-05	22.1	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|84489757|ref|YP_447989.1|	-	3.8e-06	26.5	0.0	7.2e-06	25.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|84489757|ref|YP_447989.1|	-	2e-05	24.5	0.7	0.031	14.0	0.4	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|84489757|ref|YP_447989.1|	-	2.9e-05	24.7	0.4	4.1e-05	24.2	0.4	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|84489757|ref|YP_447989.1|	-	7.8e-05	23.0	0.0	0.00013	22.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|84489757|ref|YP_447989.1|	-	8.9e-05	22.9	0.0	0.00012	22.6	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|84489757|ref|YP_447989.1|	-	0.00013	21.9	0.2	0.00032	20.7	0.1	1.7	2	1	0	2	2	2	1	RsgA	GTPase
ABC_ATPase	PF09818.9	gi|84489757|ref|YP_447989.1|	-	0.00026	19.9	0.3	0.45	9.3	0.0	3.0	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_13	PF13166.6	gi|84489757|ref|YP_447989.1|	-	0.00038	19.3	0.0	0.04	12.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|84489757|ref|YP_447989.1|	-	0.0016	18.4	0.1	0.0037	17.2	0.0	1.5	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA	PF00004.29	gi|84489757|ref|YP_447989.1|	-	0.0022	18.4	0.4	0.032	14.7	0.4	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|84489757|ref|YP_447989.1|	-	0.0033	16.6	0.0	0.0056	15.9	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
ATPase_2	PF01637.18	gi|84489757|ref|YP_447989.1|	-	0.011	15.6	0.0	0.027	14.4	0.0	1.7	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
G-alpha	PF00503.20	gi|84489757|ref|YP_447989.1|	-	0.013	14.7	0.0	0.016	14.4	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
NACHT	PF05729.12	gi|84489757|ref|YP_447989.1|	-	0.017	15.1	0.0	0.018	14.9	0.0	1.4	1	1	0	1	1	1	0	NACHT	domain
AAA_14	PF13173.6	gi|84489757|ref|YP_447989.1|	-	0.017	15.1	0.0	0.13	12.3	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
Cytidylate_kin	PF02224.18	gi|84489757|ref|YP_447989.1|	-	0.019	14.7	0.0	0.076	12.7	0.0	1.9	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_24	PF13479.6	gi|84489757|ref|YP_447989.1|	-	0.023	14.4	0.4	0.069	12.9	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|84489757|ref|YP_447989.1|	-	0.024	14.4	0.0	0.3	10.8	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Adeno_IVa2	PF02456.15	gi|84489757|ref|YP_447989.1|	-	0.026	13.3	0.5	0.22	10.3	0.0	2.1	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
MMR_HSR1	PF01926.23	gi|84489757|ref|YP_447989.1|	-	0.026	14.6	0.1	0.042	13.9	0.1	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.6	gi|84489757|ref|YP_447989.1|	-	0.027	14.2	0.0	0.063	13.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|84489757|ref|YP_447989.1|	-	0.036	14.3	0.1	0.15	12.3	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|84489757|ref|YP_447989.1|	-	0.039	14.1	0.0	0.1	12.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|84489757|ref|YP_447989.1|	-	0.059	13.0	0.0	0.32	10.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.6	gi|84489757|ref|YP_447989.1|	-	0.083	13.1	0.2	0.86	9.9	0.2	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.6	gi|84489757|ref|YP_447989.1|	-	0.09	13.3	0.0	0.19	12.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|84489757|ref|YP_447989.1|	-	0.12	12.7	0.1	0.46	10.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|84489757|ref|YP_447989.1|	-	0.12	11.4	0.1	0.22	10.5	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_5	PF07728.14	gi|84489757|ref|YP_447989.1|	-	0.14	12.2	0.1	1.8	8.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
BPD_transp_1	PF00528.22	gi|84489758|ref|YP_447990.1|	-	1.2e-20	74.0	17.5	1.8e-20	73.5	17.5	1.2	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_3	PF00497.20	gi|84489759|ref|YP_447991.1|	-	6.7e-56	189.2	0.5	8.3e-56	188.9	0.5	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Phosphonate-bd	PF12974.7	gi|84489759|ref|YP_447991.1|	-	6.2e-06	26.0	0.2	9.9e-06	25.3	0.2	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
NMT1	PF09084.11	gi|84489759|ref|YP_447991.1|	-	0.0035	17.3	0.1	0.011	15.7	0.1	1.8	2	0	0	2	2	2	1	NMT1/THI5	like
HTH_19	PF12844.7	gi|84489759|ref|YP_447991.1|	-	0.062	13.3	0.0	0.16	12.0	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
SurA_N_3	PF13624.6	gi|84489759|ref|YP_447991.1|	-	0.73	9.6	5.7	5.7	6.7	1.7	2.2	2	0	0	2	2	2	0	SurA	N-terminal	domain
DUF4013	PF13197.6	gi|84489760|ref|YP_447992.1|	-	1.9e-22	79.9	26.0	1.9e-22	79.9	26.0	2.5	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF4013)
MMgT	PF10270.9	gi|84489760|ref|YP_447992.1|	-	0.21	11.9	0.8	0.51	10.7	0.0	2.1	2	0	0	2	2	2	0	Membrane	magnesium	transporter
MARVEL	PF01284.23	gi|84489760|ref|YP_447992.1|	-	0.38	10.8	14.8	1	9.4	6.0	2.9	2	1	0	2	2	2	0	Membrane-associating	domain
Uroplakin_II	PF07353.12	gi|84489760|ref|YP_447992.1|	-	0.49	9.9	5.2	0.068	12.7	0.6	1.9	2	0	0	2	2	2	0	Uroplakin	II
DUF4013	PF13197.6	gi|84489761|ref|YP_447993.1|	-	1.4e-23	83.6	27.7	1.4e-23	83.6	27.7	2.7	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF4013)
Big_3_5	PF16640.5	gi|84489762|ref|YP_447994.1|	-	4.9e-11	42.7	5.1	6.7e-08	32.6	0.1	6.2	6	1	1	7	7	7	2	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|84489762|ref|YP_447994.1|	-	4.6e-06	26.8	14.2	0.0053	17.0	0.6	4.6	5	0	0	5	5	5	2	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|84489762|ref|YP_447994.1|	-	1.1e-05	25.3	18.5	0.015	15.3	0.1	5.7	4	1	0	4	4	4	3	Bacterial	Ig-like	domain	(group	1)
CooC_C	PF15976.5	gi|84489762|ref|YP_447994.1|	-	0.00049	20.1	9.5	0.075	13.1	0.1	5.1	3	1	1	4	4	4	1	CS1-pili	formation	C-terminal
Tnp_22_trimer	PF17489.2	gi|84489762|ref|YP_447994.1|	-	0.065	13.2	0.2	0.82	9.7	0.0	3.0	2	0	0	2	2	2	0	L1	transposable	element	trimerization	domain
Big_3_5	PF16640.5	gi|84489763|ref|YP_447995.1|	-	1.2e-11	44.7	26.8	0.00039	20.5	1.5	4.9	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|84489763|ref|YP_447995.1|	-	5.4e-05	23.1	36.8	5.4e-05	23.1	36.8	5.4	2	1	1	3	3	3	1	Right	handed	beta	helix	region
Nitroreductase	PF00881.24	gi|84489764|ref|YP_447996.1|	-	1.2e-21	77.5	0.1	4.1e-13	49.7	0.0	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|84489764|ref|YP_447996.1|	-	4.7e-11	42.7	0.6	1.1e-10	41.4	0.6	2.0	1	1	0	1	1	1	1	Putative	TM	nitroreductase
ApbA_C	PF08546.11	gi|84489765|ref|YP_447997.1|	-	2e-32	112.0	0.0	3.2e-32	111.3	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.16	gi|84489765|ref|YP_447997.1|	-	2e-19	69.7	0.1	7.1e-18	64.7	0.0	2.1	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.23	gi|84489765|ref|YP_447997.1|	-	0.0021	18.1	0.0	0.0032	17.5	0.0	1.4	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Methyltransf_11	PF08241.12	gi|84489765|ref|YP_447997.1|	-	0.14	12.9	0.0	1.4	9.6	0.0	2.3	2	0	0	2	2	2	0	Methyltransferase	domain
GFO_IDH_MocA	PF01408.22	gi|84489765|ref|YP_447997.1|	-	0.16	12.8	0.0	0.34	11.7	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ADH_N	PF08240.12	gi|84489766|ref|YP_447998.1|	-	1e-15	57.5	0.0	3.7e-15	55.7	0.0	1.9	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|84489766|ref|YP_447998.1|	-	1.9e-15	57.0	0.2	2.9e-15	56.4	0.2	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.6	gi|84489766|ref|YP_447998.1|	-	9.5e-05	23.5	0.0	0.00016	22.7	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|84489766|ref|YP_447998.1|	-	0.0084	15.4	2.0	0.013	14.8	2.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
GIT1_C	PF12205.8	gi|84489767|ref|YP_447999.1|	-	0.17	12.0	3.7	0.85	9.8	0.5	2.1	1	1	1	2	2	2	0	G	protein-coupled	receptor	kinase-interacting	protein	1	C	term
7TMR-HDED	PF07697.11	gi|84489767|ref|YP_447999.1|	-	0.57	10.3	5.0	0.77	9.8	5.0	1.1	1	0	0	1	1	1	0	7TM-HD	extracellular
DUF116	PF01976.17	gi|84489769|ref|YP_448001.1|	-	9.7e-30	103.1	5.4	9.7e-30	103.1	5.4	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF116
UN_NPL4	PF11543.8	gi|84489769|ref|YP_448001.1|	-	0.11	13.0	2.6	1.6	9.3	0.1	2.8	2	1	0	2	2	2	0	Nuclear	pore	localisation	protein	NPL4
IFN-gamma	PF00714.17	gi|84489769|ref|YP_448001.1|	-	1.3	8.8	11.5	0.76	9.6	0.3	3.2	2	1	1	3	3	3	0	Interferon	gamma
TetR_N	PF00440.23	gi|84489770|ref|YP_448002.1|	-	1e-10	41.2	0.0	1.7e-10	40.5	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
CENP-B_N	PF04218.13	gi|84489770|ref|YP_448002.1|	-	0.0023	17.5	0.5	0.0047	16.5	0.1	1.8	2	0	0	2	2	2	1	CENP-B	N-terminal	DNA-binding	domain
HTH_36	PF13730.6	gi|84489770|ref|YP_448002.1|	-	0.018	15.0	0.1	0.036	14.0	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|84489770|ref|YP_448002.1|	-	0.062	13.7	0.0	0.15	12.5	0.0	1.7	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.7	gi|84489770|ref|YP_448002.1|	-	2.9	8.0	8.7	0.16	12.0	0.4	3.0	2	1	0	3	3	3	0	Helix-turn-helix	domain
SpoIIM	PF01944.17	gi|84489771|ref|YP_448003.1|	-	7.3e-22	78.1	20.5	7.3e-22	78.1	20.5	2.2	2	0	0	2	2	2	1	Stage	II	sporulation	protein	M
2-ph_phosp	PF04029.14	gi|84489772|ref|YP_448004.1|	-	1.2e-57	194.8	6.4	1.4e-57	194.5	6.4	1.0	1	0	0	1	1	1	1	2-phosphosulpholactate	phosphatase
DUF5633	PF18656.1	gi|84489772|ref|YP_448004.1|	-	0.68	9.9	4.1	2.1	8.3	0.9	2.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5633)
TatD_DNase	PF01026.21	gi|84489773|ref|YP_448005.1|	-	6.9e-67	225.5	0.0	7.8e-67	225.3	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
zf-CCHC_4	PF14392.6	gi|84489773|ref|YP_448005.1|	-	0.11	12.3	0.1	6	6.7	0.0	2.7	2	0	0	2	2	2	0	Zinc	knuckle
HTH_38	PF13936.6	gi|84489773|ref|YP_448005.1|	-	0.11	12.3	0.0	0.38	10.6	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
zinc_ribbon_2	PF13240.6	gi|84489774|ref|YP_448006.1|	-	0.0021	17.7	4.0	0.0043	16.7	4.0	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84489774|ref|YP_448006.1|	-	0.0066	16.5	2.0	0.015	15.3	2.0	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
Peptidase_M78	PF06114.13	gi|84489774|ref|YP_448006.1|	-	0.024	14.6	0.1	0.076	13.0	0.1	1.8	1	1	0	1	1	1	0	IrrE	N-terminal-like	domain
zf-ribbon_3	PF13248.6	gi|84489774|ref|YP_448006.1|	-	0.47	9.9	5.1	1.2	8.7	5.1	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|84489775|ref|YP_448007.1|	-	1.6e-05	24.5	1.5	4e-05	23.2	1.5	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84489775|ref|YP_448007.1|	-	0.00041	20.3	0.2	0.00068	19.6	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
TackOD1	PF18551.1	gi|84489775|ref|YP_448007.1|	-	0.006	16.3	1.0	0.014	15.1	0.1	2.0	2	0	0	2	2	2	1	Thaumarchaeal	output	domain	1
zinc_ribbon_15	PF17032.5	gi|84489775|ref|YP_448007.1|	-	0.018	15.8	0.2	0.043	14.6	0.2	1.7	1	0	0	1	1	1	0	zinc-ribbon	family
DUF35_N	PF12172.8	gi|84489775|ref|YP_448007.1|	-	0.24	11.3	0.9	0.43	10.5	0.9	1.3	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Nudix_N_2	PF14803.6	gi|84489775|ref|YP_448007.1|	-	0.29	11.1	1.5	1.5	8.8	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
NOB1_Zn_bind	PF08772.11	gi|84489775|ref|YP_448007.1|	-	0.42	10.8	2.0	5.2	7.3	0.1	2.5	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-ribbon_3	PF13248.6	gi|84489775|ref|YP_448007.1|	-	0.85	9.1	5.0	3.2	7.3	4.9	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
CbiM	PF01891.16	gi|84489776|ref|YP_448008.1|	-	1.5e-39	136.0	17.1	1.7e-39	135.8	17.1	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
Adeno_GP19K	PF04881.13	gi|84489776|ref|YP_448008.1|	-	0.31	11.0	1.8	0.39	10.7	0.1	2.0	2	0	0	2	2	2	0	Adenovirus	GP19K
Phage_holin_2_3	PF16080.5	gi|84489776|ref|YP_448008.1|	-	2.5	7.9	6.4	15	5.4	0.0	3.2	3	0	0	3	3	3	0	Bacteriophage	holin	family	HP1
Aldo_ket_red	PF00248.21	gi|84489777|ref|YP_448009.1|	-	3.1e-43	148.1	0.3	7.6e-41	140.2	0.3	2.1	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|84489777|ref|YP_448009.1|	-	1.3e-07	32.0	8.8	3.2e-07	30.8	8.8	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489777|ref|YP_448009.1|	-	4.8e-07	29.8	5.9	4.8e-07	29.8	5.9	1.8	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489777|ref|YP_448009.1|	-	7.1e-06	26.5	5.7	7.1e-06	26.5	5.7	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489777|ref|YP_448009.1|	-	1.6e-05	25.1	10.0	0.003	17.7	0.8	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|84489777|ref|YP_448009.1|	-	1.6e-05	24.5	13.7	0.00096	18.9	3.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|84489777|ref|YP_448009.1|	-	0.00014	21.6	11.5	0.036	13.8	1.8	2.6	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_8	PF13183.6	gi|84489777|ref|YP_448009.1|	-	0.00014	22.2	5.6	0.00032	21.1	5.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489777|ref|YP_448009.1|	-	0.0029	17.7	14.7	0.017	15.2	3.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489777|ref|YP_448009.1|	-	0.016	16.0	7.8	0.31	11.9	0.2	3.2	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84489777|ref|YP_448009.1|	-	0.022	14.9	12.8	0.041	14.0	0.7	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
EF-hand_13	PF17958.1	gi|84489777|ref|YP_448009.1|	-	0.026	14.3	0.0	0.6	10.0	0.0	2.4	2	0	0	2	2	2	0	EF-hand	domain
Fer4_16	PF13484.6	gi|84489777|ref|YP_448009.1|	-	0.35	11.8	18.9	0.93	10.5	4.0	3.3	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
zf-CXXC	PF02008.20	gi|84489777|ref|YP_448009.1|	-	1.4	9.0	9.7	2	8.5	2.4	2.7	2	0	0	2	2	2	0	CXXC	zinc	finger	domain
Fer4_3	PF12798.7	gi|84489777|ref|YP_448009.1|	-	2.6	9.2	13.0	7.7	7.7	3.7	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Osmo_CC	PF08946.10	gi|84489778|ref|YP_448010.1|	-	0.0069	16.6	8.2	0.01	16.0	4.3	2.6	1	1	1	2	2	2	1	Osmosensory	transporter	coiled	coil
ACCA	PF03255.14	gi|84489778|ref|YP_448010.1|	-	0.036	13.9	3.9	0.039	13.8	3.3	1.4	1	1	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Ax_dynein_light	PF10211.9	gi|84489778|ref|YP_448010.1|	-	0.043	13.8	10.3	0.052	13.5	10.3	1.3	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
DUF4407	PF14362.6	gi|84489778|ref|YP_448010.1|	-	0.046	13.1	2.0	0.045	13.1	2.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Phytochelatin	PF05023.14	gi|84489778|ref|YP_448010.1|	-	0.1	11.8	0.5	0.13	11.5	0.5	1.1	1	0	0	1	1	1	0	Phytochelatin	synthase
L_lactis_ph-MCP	PF06673.11	gi|84489778|ref|YP_448010.1|	-	0.12	11.3	3.0	0.15	11.0	3.0	1.2	1	0	0	1	1	1	0	Lactococcus	lactis	bacteriophage	major	capsid	protein
TINF2_N	PF14973.6	gi|84489778|ref|YP_448010.1|	-	0.17	12.2	3.9	0.2	12.0	3.9	1.2	1	0	0	1	1	1	0	TERF1-interacting	nuclear	factor	2	N-terminus
TraF_2	PF13729.6	gi|84489778|ref|YP_448010.1|	-	0.24	10.7	1.4	0.27	10.6	1.4	1.2	1	0	0	1	1	1	0	F	plasmid	transfer	operon,	TraF,	protein
FlxA	PF14282.6	gi|84489778|ref|YP_448010.1|	-	1	9.4	9.0	0.72	9.9	4.6	2.1	1	1	1	2	2	2	0	FlxA-like	protein
GTP-bdg_M	PF16360.5	gi|84489778|ref|YP_448010.1|	-	1.4	9.6	4.3	2.7	8.7	0.4	2.3	2	0	0	2	2	2	0	GTP-binding	GTPase	Middle	Region
DUF11	PF01345.18	gi|84489779|ref|YP_448011.1|	-	1.9e-05	24.8	1.4	0.0061	16.8	0.0	4.1	3	1	0	3	3	3	2	Domain	of	unknown	function	DUF11
ABM	PF03992.16	gi|84489780|ref|YP_448012.1|	-	4e-16	58.9	0.1	4.9e-16	58.6	0.1	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
MS_channel	PF00924.18	gi|84489781|ref|YP_448013.1|	-	2.5e-38	131.7	4.6	2.5e-38	131.7	4.6	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF5085	PF16895.5	gi|84489781|ref|YP_448013.1|	-	0.0039	17.5	0.8	0.0083	16.5	0.8	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5085)
FtsX_ECD	PF18075.1	gi|84489781|ref|YP_448013.1|	-	0.03	15.0	0.4	0.063	13.9	0.4	1.6	1	0	0	1	1	1	0	FtsX	extracellular	domain
Big_3_5	PF16640.5	gi|84489782|ref|YP_448014.1|	-	7.6e-20	70.9	35.5	3.1e-11	43.3	4.0	9.5	11	0	0	11	11	11	5	Bacterial	Ig-like	domain	(group	3)
Chlam_PMP	PF02415.17	gi|84489782|ref|YP_448014.1|	-	4.6e-15	55.0	148.8	0.012	16.1	4.8	18.2	18	1	0	18	18	18	11	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_1	PF02369.16	gi|84489782|ref|YP_448014.1|	-	2e-06	27.7	0.8	2e-06	27.7	0.8	7.7	7	0	0	7	7	7	3	Bacterial	Ig-like	domain	(group	1)
PMC2NT	PF08066.12	gi|84489782|ref|YP_448014.1|	-	0.047	14.4	1.9	0.18	12.5	1.9	2.0	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
PDZ_6	PF17820.1	gi|84489782|ref|YP_448014.1|	-	0.18	11.7	1.5	7.3	6.5	0.1	3.4	3	0	0	3	3	3	0	PDZ	domain
Tricorn_PDZ	PF14685.6	gi|84489782|ref|YP_448014.1|	-	0.22	11.5	4.4	1.4	9.0	0.2	4.3	3	1	1	4	4	4	0	Tricorn	protease	PDZ	domain
RIC3	PF15361.6	gi|84489782|ref|YP_448014.1|	-	0.24	11.8	2.3	0.54	10.6	2.3	1.6	1	0	0	1	1	1	0	Resistance	to	inhibitors	of	cholinesterase	homologue	3
Ntox44	PF15607.6	gi|84489782|ref|YP_448014.1|	-	1.8	8.9	8.2	0.25	11.7	1.3	3.3	2	0	0	2	2	2	0	Bacterial	toxin	44
Peptidase_U32	PF01136.19	gi|84489783|ref|YP_448015.1|	-	3.2e-98	327.6	0.3	9.3e-77	257.3	0.1	2.3	2	0	0	2	2	2	2	Peptidase	family	U32
DUF3656	PF12392.8	gi|84489783|ref|YP_448015.1|	-	8.6e-21	74.6	0.4	4.5e-20	72.3	0.1	2.4	2	0	0	2	2	2	1	Collagenase
SET	PF00856.28	gi|84489783|ref|YP_448015.1|	-	0.017	15.5	0.3	0.12	12.8	0.0	2.5	2	0	0	2	2	2	0	SET	domain
DUF1131	PF06572.12	gi|84489783|ref|YP_448015.1|	-	0.12	12.1	0.1	3	7.5	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1131)
Acetyltransf_10	PF13673.7	gi|84489784|ref|YP_448016.1|	-	3e-06	27.2	0.0	4.8e-06	26.5	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|84489784|ref|YP_448016.1|	-	0.0028	18.1	0.0	0.0047	17.3	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|84489784|ref|YP_448016.1|	-	0.01	16.1	0.0	0.012	15.8	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	family
FR47	PF08445.10	gi|84489784|ref|YP_448016.1|	-	0.073	13.0	0.0	2.5	8.1	0.0	2.3	2	0	0	2	2	2	0	FR47-like	protein
Adenylsucc_synt	PF00709.21	gi|84489785|ref|YP_448017.1|	-	5.3e-91	305.6	0.3	2.5e-43	148.6	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
DUF2628	PF10947.8	gi|84489786|ref|YP_448018.1|	-	0.033	14.5	5.8	0.04	14.3	5.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
ECF_trnsprt	PF12822.7	gi|84489786|ref|YP_448018.1|	-	0.034	14.2	9.9	0.04	14.0	9.9	1.0	1	0	0	1	1	1	0	ECF	transporter,	substrate-specific	component
PHO4	PF01384.20	gi|84489786|ref|YP_448018.1|	-	0.088	11.8	1.7	0.092	11.8	1.7	1.1	1	0	0	1	1	1	0	Phosphate	transporter	family
TP_methylase	PF00590.20	gi|84489787|ref|YP_448019.1|	-	2.1e-45	155.3	0.2	2.6e-45	155.0	0.2	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Glycos_transf_2	PF00535.26	gi|84489788|ref|YP_448020.1|	-	5.4e-24	84.9	0.0	7e-24	84.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489788|ref|YP_448020.1|	-	3.1e-05	24.0	0.0	4.4e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84489788|ref|YP_448020.1|	-	0.00027	20.5	0.0	0.00042	19.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84489788|ref|YP_448020.1|	-	0.0059	17.1	0.0	0.01	16.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|84489788|ref|YP_448020.1|	-	0.022	14.2	0.0	0.04	13.4	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	21
PIRT	PF15099.6	gi|84489788|ref|YP_448020.1|	-	0.24	11.0	1.8	0.51	9.9	1.8	1.5	1	0	0	1	1	1	0	Phosphoinositide-interacting	protein	family
GDP_Man_Dehyd	PF16363.5	gi|84489789|ref|YP_448021.1|	-	7.7e-78	262.2	0.2	3.9e-36	125.1	0.0	3.0	2	1	1	3	3	3	3	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|84489789|ref|YP_448021.1|	-	4.1e-55	186.9	0.1	6.7e-55	186.2	0.1	1.3	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.15	gi|84489789|ref|YP_448021.1|	-	4.1e-10	39.3	0.0	9.8e-10	38.0	0.0	1.6	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|84489789|ref|YP_448021.1|	-	3.5e-09	36.1	0.1	8.7e-09	34.8	0.0	1.6	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|84489789|ref|YP_448021.1|	-	1.7e-08	34.0	0.0	1.3e-07	31.1	0.0	2.0	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|84489789|ref|YP_448021.1|	-	1.6e-06	27.5	0.0	8.8e-06	25.1	0.0	2.0	1	1	0	1	1	1	1	Male	sterility	protein
adh_short	PF00106.25	gi|84489789|ref|YP_448021.1|	-	2.7e-05	23.7	0.0	6.2e-05	22.5	0.0	1.6	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.6	gi|84489789|ref|YP_448021.1|	-	0.00033	20.6	0.0	0.00092	19.1	0.0	1.7	2	0	0	2	2	2	1	NAD(P)H-binding
KR	PF08659.10	gi|84489789|ref|YP_448021.1|	-	0.0028	17.6	0.0	0.015	15.3	0.0	1.9	1	1	1	2	2	2	1	KR	domain
NmrA	PF05368.13	gi|84489789|ref|YP_448021.1|	-	0.021	14.4	0.0	0.036	13.6	0.0	1.4	1	0	0	1	1	1	0	NmrA-like	family
Glycos_transf_1	PF00534.20	gi|84489790|ref|YP_448022.1|	-	6.9e-36	123.4	0.1	2.3e-35	121.7	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|84489790|ref|YP_448022.1|	-	1e-25	90.7	0.0	1.7e-25	90.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|84489790|ref|YP_448022.1|	-	8.8e-13	48.6	0.0	1.3e-12	48.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|84489790|ref|YP_448022.1|	-	0.0013	19.0	0.0	0.0065	16.8	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|84489790|ref|YP_448022.1|	-	0.0085	16.5	0.0	0.012	16.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
AP_endonuc_2	PF01261.24	gi|84489791|ref|YP_448023.1|	-	1.4e-31	109.6	0.0	1.7e-31	109.3	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF3882	PF07066.11	gi|84489791|ref|YP_448023.1|	-	0.034	14.2	1.6	0.25	11.4	0.1	2.5	2	1	1	3	3	3	0	Lactococcus	phage	M3	protein
Fes1	PF08609.10	gi|84489791|ref|YP_448023.1|	-	0.31	11.9	1.8	22	6.0	0.1	2.6	2	0	0	2	2	2	0	Nucleotide	exchange	factor	Fes1
Epimerase	PF01370.21	gi|84489792|ref|YP_448024.1|	-	1.5e-41	142.5	0.1	1.8e-41	142.2	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|84489792|ref|YP_448024.1|	-	1.5e-25	90.3	0.9	4.5e-25	88.8	0.9	1.7	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|84489792|ref|YP_448024.1|	-	1.4e-16	60.3	0.1	3e-16	59.3	0.1	1.5	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.12	gi|84489792|ref|YP_448024.1|	-	9.8e-14	51.1	0.0	1.9e-10	40.3	0.0	2.1	2	0	0	2	2	2	2	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|84489792|ref|YP_448024.1|	-	1.6e-12	47.2	0.0	1.9e-12	46.9	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|84489792|ref|YP_448024.1|	-	2.5e-07	30.1	0.0	3.2e-05	23.2	0.0	2.4	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|84489792|ref|YP_448024.1|	-	0.00035	20.5	0.0	0.00055	19.9	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|84489792|ref|YP_448024.1|	-	0.0069	15.9	0.0	0.033	13.6	0.0	2.2	2	1	0	2	2	2	1	short	chain	dehydrogenase
Trns_repr_metal	PF02583.17	gi|84489793|ref|YP_448025.1|	-	2e-28	98.6	0.6	2.3e-28	98.4	0.6	1.1	1	0	0	1	1	1	1	Metal-sensitive	transcriptional	repressor
Img2	PF05046.14	gi|84489793|ref|YP_448025.1|	-	0.0061	16.8	0.1	0.014	15.6	0.1	1.6	1	1	1	2	2	2	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
Dynactin_p22	PF07426.11	gi|84489793|ref|YP_448025.1|	-	0.099	12.5	0.1	0.11	12.3	0.1	1.4	1	1	0	1	1	1	0	Dynactin	subunit	p22
Rib_5-P_isom_A	PF06026.14	gi|84489794|ref|YP_448026.1|	-	1.1e-64	217.2	0.3	1.3e-64	217.0	0.3	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|84489794|ref|YP_448026.1|	-	1.5e-09	38.0	0.0	8.5e-06	25.8	0.0	2.2	1	1	1	2	2	2	2	DeoR	C	terminal	sensor	domain
Sugar-bind	PF04198.13	gi|84489794|ref|YP_448026.1|	-	0.061	12.5	0.0	0.098	11.8	0.0	1.3	1	0	0	1	1	1	0	Putative	sugar-binding	domain
UPF0179	PF03684.13	gi|84489795|ref|YP_448027.1|	-	2.9e-46	156.9	7.5	3.2e-46	156.7	7.5	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
Fe-ADH_2	PF13685.6	gi|84489796|ref|YP_448028.1|	-	9.1e-69	231.9	3.4	1.2e-68	231.5	3.4	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|84489796|ref|YP_448028.1|	-	1.2e-25	90.1	4.6	2.6e-24	85.7	4.6	2.0	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|84489796|ref|YP_448028.1|	-	6.3e-07	28.8	0.9	2.6e-06	26.8	0.9	1.9	1	1	0	1	1	1	1	3-dehydroquinate	synthase
MIP	PF00230.20	gi|84489797|ref|YP_448029.1|	-	1.6e-46	158.9	18.3	1.8e-46	158.7	18.3	1.0	1	0	0	1	1	1	1	Major	intrinsic	protein
PXT1	PF15214.6	gi|84489797|ref|YP_448029.1|	-	0.12	12.8	0.0	0.26	11.6	0.0	1.5	1	0	0	1	1	1	0	Peroxisomal	testis-specific	protein	1
DUF5368	PF17336.2	gi|84489797|ref|YP_448029.1|	-	7.6	6.8	10.1	2	8.6	3.8	2.9	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5368)
ParD	PF09386.10	gi|84489798|ref|YP_448030.1|	-	0.31	11.5	1.9	3	8.3	0.1	2.6	2	1	1	3	3	3	0	Antitoxin	ParD
ABC_tran	PF00005.27	gi|84489799|ref|YP_448031.1|	-	1.2e-32	113.3	0.0	1.9e-32	112.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|84489799|ref|YP_448031.1|	-	2.5e-10	40.6	0.0	0.00018	21.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|84489799|ref|YP_448031.1|	-	7.5e-05	22.7	0.0	0.00016	21.6	0.0	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_15	PF13175.6	gi|84489799|ref|YP_448031.1|	-	0.00015	21.6	0.2	0.00023	21.0	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
ABC_ATPase	PF09818.9	gi|84489799|ref|YP_448031.1|	-	0.0011	17.9	0.1	0.014	14.2	0.0	2.0	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.6	gi|84489799|ref|YP_448031.1|	-	0.0015	18.8	0.1	0.0039	17.4	0.0	1.7	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|84489799|ref|YP_448031.1|	-	0.0018	18.5	0.0	0.0034	17.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|84489799|ref|YP_448031.1|	-	0.003	18.1	1.3	0.0035	17.9	1.3	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|84489799|ref|YP_448031.1|	-	0.0066	16.9	0.0	0.011	16.1	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
SRPRB	PF09439.10	gi|84489799|ref|YP_448031.1|	-	0.0085	15.5	0.0	0.42	10.0	0.0	2.3	2	0	0	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
Rad17	PF03215.15	gi|84489799|ref|YP_448031.1|	-	0.011	15.7	0.3	0.15	11.9	0.0	2.5	3	0	0	3	3	3	0	Rad17	P-loop	domain
ATPase_2	PF01637.18	gi|84489799|ref|YP_448031.1|	-	0.017	15.0	0.4	0.11	12.4	0.0	2.1	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA	PF00004.29	gi|84489799|ref|YP_448031.1|	-	0.02	15.3	0.6	0.056	13.9	0.1	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|84489799|ref|YP_448031.1|	-	0.027	14.0	0.1	0.075	12.5	0.0	1.7	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|84489799|ref|YP_448031.1|	-	0.029	14.6	0.0	0.066	13.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|84489799|ref|YP_448031.1|	-	0.034	14.1	0.1	0.14	12.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.6	gi|84489799|ref|YP_448031.1|	-	0.035	14.7	0.0	0.4	11.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
SMC_N	PF02463.19	gi|84489799|ref|YP_448031.1|	-	0.036	13.5	0.2	1.7	8.0	0.1	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
PduV-EutP	PF10662.9	gi|84489799|ref|YP_448031.1|	-	0.039	13.7	0.0	0.1	12.4	0.0	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
NACHT	PF05729.12	gi|84489799|ref|YP_448031.1|	-	0.048	13.6	0.1	0.13	12.2	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
AAA_29	PF13555.6	gi|84489799|ref|YP_448031.1|	-	0.058	13.1	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NB-ARC	PF00931.22	gi|84489799|ref|YP_448031.1|	-	0.098	11.8	0.2	0.21	10.7	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
RNA_helicase	PF00910.22	gi|84489799|ref|YP_448031.1|	-	0.1	13.0	0.0	0.24	11.8	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
MMR_HSR1	PF01926.23	gi|84489799|ref|YP_448031.1|	-	0.1	12.7	0.1	0.38	10.9	0.1	2.2	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
MobB	PF03205.14	gi|84489799|ref|YP_448031.1|	-	0.11	12.4	0.0	0.32	10.9	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.6	gi|84489799|ref|YP_448031.1|	-	0.14	11.9	0.0	0.29	10.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|84489799|ref|YP_448031.1|	-	0.21	11.9	0.3	17	5.8	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
BPD_transp_1	PF00528.22	gi|84489800|ref|YP_448032.1|	-	2.3e-23	82.9	16.0	2.3e-23	82.9	16.0	2.5	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF267	PF03268.14	gi|84489800|ref|YP_448032.1|	-	0.026	13.4	2.3	0.028	13.3	0.3	2.0	2	1	1	3	3	3	0	Caenorhabditis	protein	of	unknown	function,	DUF267
Aminotran_5	PF00266.19	gi|84489801|ref|YP_448033.1|	-	6.6e-84	282.0	0.1	7.7e-84	281.8	0.1	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|84489801|ref|YP_448033.1|	-	8.3e-08	31.9	0.4	1.4e-07	31.1	0.4	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.17	gi|84489801|ref|YP_448033.1|	-	7.6e-06	25.5	0.2	1.8e-05	24.3	0.2	1.5	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Pyridoxal_deC	PF00282.19	gi|84489801|ref|YP_448033.1|	-	0.012	14.4	0.0	0.017	13.8	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase	conserved	domain
DUF1059	PF06348.11	gi|84489801|ref|YP_448033.1|	-	0.21	11.8	1.0	0.42	10.9	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1059)
NifU_N	PF01592.16	gi|84489802|ref|YP_448034.1|	-	2.8e-48	163.3	0.2	3.1e-48	163.1	0.2	1.0	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
tRNA-synt_2b	PF00587.25	gi|84489803|ref|YP_448035.1|	-	1.7e-30	106.3	0.0	3.3e-30	105.4	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|84489803|ref|YP_448035.1|	-	3.3e-18	65.6	0.8	8.2e-18	64.4	0.8	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.11	gi|84489803|ref|YP_448035.1|	-	9.1e-11	41.8	1.6	9.1e-11	41.8	1.6	1.7	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
ProRS-C_2	PF09181.10	gi|84489803|ref|YP_448035.1|	-	0.058	13.5	0.6	0.29	11.3	0.1	2.5	2	0	0	2	2	2	0	Prolyl-tRNA	synthetase,	C-terminal
YhfH	PF14149.6	gi|84489803|ref|YP_448035.1|	-	1.2	9.2	9.0	2.3	8.3	0.1	3.1	2	1	0	2	2	2	0	YhfH-like	protein
YbjQ_1	PF01906.17	gi|84489804|ref|YP_448036.1|	-	8.3e-34	116.4	1.1	9.1e-34	116.2	1.1	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
Asparaginase_C	PF17763.1	gi|84489804|ref|YP_448036.1|	-	0.073	13.3	0.0	0.1	12.8	0.0	1.2	1	0	0	1	1	1	0	Glutaminase/Asparaginase	C-terminal	domain
CofC	PF01983.16	gi|84489805|ref|YP_448037.1|	-	3.7e-67	225.7	1.6	4.5e-67	225.4	1.6	1.0	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transf_3	PF12804.7	gi|84489805|ref|YP_448037.1|	-	0.00023	21.5	0.0	0.00033	21.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Phos_pyr_kin	PF08543.12	gi|84489806|ref|YP_448038.1|	-	7.3e-75	251.5	0.0	8.7e-75	251.3	0.0	1.0	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|84489806|ref|YP_448038.1|	-	1.4e-09	37.7	0.0	2e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.17	gi|84489806|ref|YP_448038.1|	-	0.0092	15.5	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
ACT	PF01842.25	gi|84489807|ref|YP_448039.1|	-	2.9e-10	39.7	0.0	0.00025	20.7	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|84489807|ref|YP_448039.1|	-	0.0042	17.6	0.3	0.34	11.5	0.1	2.1	2	0	0	2	2	2	2	ACT	domain
AMP-binding_C_2	PF14535.6	gi|84489808|ref|YP_448040.1|	-	5.9e-32	109.8	1.2	1.4e-31	108.7	0.9	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|84489808|ref|YP_448040.1|	-	5.9e-15	54.8	0.1	1.1e-14	53.9	0.1	1.5	1	1	0	1	1	1	1	AMP-binding	enzyme
LuxE	PF04443.12	gi|84489808|ref|YP_448040.1|	-	4.6e-08	32.5	0.1	3.8e-06	26.2	0.0	2.4	2	0	0	2	2	2	2	Acyl-protein	synthetase,	LuxE
Metallophos	PF00149.28	gi|84489809|ref|YP_448041.1|	-	1.7e-18	67.9	0.3	2.3e-18	67.5	0.3	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84489809|ref|YP_448041.1|	-	2.7e-17	63.4	0.1	4.3e-17	62.8	0.1	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|84489809|ref|YP_448041.1|	-	8.6e-12	44.9	0.3	3.5e-09	36.3	0.0	2.3	2	1	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
DUF2096	PF09869.9	gi|84489810|ref|YP_448042.1|	-	7.9e-64	214.8	1.3	8.9e-64	214.6	1.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
DUF749	PF05370.11	gi|84489811|ref|YP_448043.1|	-	1e-34	118.5	0.9	1.1e-34	118.3	0.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF749)
CCG	PF02754.16	gi|84489812|ref|YP_448044.1|	-	5e-42	142.0	0.3	2.1e-20	72.7	0.1	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.6	gi|84489813|ref|YP_448045.1|	-	3.1e-11	43.6	6.0	4.9e-11	42.9	6.0	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489813|ref|YP_448045.1|	-	6.2e-10	39.5	7.6	9.4e-10	38.9	7.6	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489813|ref|YP_448045.1|	-	1.4e-08	34.8	6.7	2.6e-08	33.9	6.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489813|ref|YP_448045.1|	-	1.8e-08	34.4	7.2	3.1e-08	33.6	7.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84489813|ref|YP_448045.1|	-	4.5e-06	27.1	9.5	1.3e-05	25.7	9.5	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|84489813|ref|YP_448045.1|	-	4.1e-05	23.3	3.6	0.0087	15.8	0.5	2.2	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.27	gi|84489813|ref|YP_448045.1|	-	0.0045	16.8	13.5	0.28	11.1	2.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84489813|ref|YP_448045.1|	-	0.027	14.5	12.2	0.15	12.2	3.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|84489813|ref|YP_448045.1|	-	0.058	14.4	15.7	0.29	12.2	2.4	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489813|ref|YP_448045.1|	-	0.059	14.3	13.8	1.3	10.0	14.0	2.3	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|84489813|ref|YP_448045.1|	-	0.4	10.9	9.6	1.5	9.0	9.6	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489813|ref|YP_448045.1|	-	4.3	7.6	8.6	7.6	6.8	1.7	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489813|ref|YP_448045.1|	-	9	7.2	11.7	6.8	7.6	1.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489813|ref|YP_448045.1|	-	9.8	7.0	12.1	6.4	7.5	2.7	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
TGT	PF01702.18	gi|84489814|ref|YP_448046.1|	-	6.6e-11	42.0	0.5	4.5e-10	39.2	0.5	1.8	1	1	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
HIT	PF01230.23	gi|84489814|ref|YP_448046.1|	-	0.17	12.6	1.5	0.25	12.1	0.2	1.8	2	0	0	2	2	2	0	HIT	domain
DUF2905	PF11146.8	gi|84489814|ref|YP_448046.1|	-	0.22	11.7	0.2	0.33	11.2	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2905)
PfUIS3	PF11567.8	gi|84489814|ref|YP_448046.1|	-	0.96	9.8	9.6	0.23	11.8	5.1	2.0	2	0	0	2	2	2	0	Plasmodium	falciparum	UIS3	membrane	protein
TP_methylase	PF00590.20	gi|84489816|ref|YP_448048.1|	-	4.2e-19	69.3	0.0	5.4e-19	69.0	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Met_10	PF02475.16	gi|84489817|ref|YP_448049.1|	-	1.5e-66	223.9	0.6	2.8e-66	223.1	0.6	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|84489817|ref|YP_448049.1|	-	1.2e-16	60.3	5.6	8.6e-16	57.6	4.6	2.7	2	0	0	2	2	2	1	tRNA	methyltransferase	5	N-terminal	domain
Cons_hypoth95	PF03602.15	gi|84489817|ref|YP_448049.1|	-	1.6e-06	27.9	0.0	2.9e-06	27.1	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
TRM	PF02005.16	gi|84489817|ref|YP_448049.1|	-	7.7e-06	25.3	0.1	1.2e-05	24.7	0.1	1.3	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
MTS	PF05175.14	gi|84489817|ref|YP_448049.1|	-	2.4e-05	24.0	0.0	6.2e-05	22.6	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.10	gi|84489817|ref|YP_448049.1|	-	2.9e-05	23.7	0.0	5.7e-05	22.8	0.0	1.6	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.13	gi|84489817|ref|YP_448049.1|	-	0.00019	20.9	0.0	0.00035	20.1	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltr_RsmB-F	PF01189.17	gi|84489817|ref|YP_448049.1|	-	0.00038	20.1	0.1	0.033	13.8	0.0	2.5	2	1	1	3	3	3	2	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_31	PF13847.6	gi|84489817|ref|YP_448049.1|	-	0.00057	19.7	0.0	0.0033	17.2	0.0	2.2	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|84489817|ref|YP_448049.1|	-	0.0015	19.2	0.0	0.0033	18.1	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
DNA_methylase	PF00145.17	gi|84489817|ref|YP_448049.1|	-	0.0025	17.2	0.8	0.012	15.0	0.0	2.1	2	0	0	2	2	2	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_18	PF12847.7	gi|84489817|ref|YP_448049.1|	-	0.0062	16.5	0.9	0.017	15.0	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.18	gi|84489817|ref|YP_448049.1|	-	0.017	14.8	0.1	0.043	13.5	0.1	2.0	1	1	0	1	1	1	0	DNA	methylase
ADH_zinc_N	PF00107.26	gi|84489817|ref|YP_448049.1|	-	0.028	14.4	0.0	0.058	13.4	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
IF-2B	PF01008.17	gi|84489818|ref|YP_448050.1|	-	2.3e-73	246.9	0.5	3.2e-73	246.4	0.5	1.2	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Radical_SAM	PF04055.21	gi|84489819|ref|YP_448051.1|	-	9.2e-23	81.4	0.1	1.3e-22	80.9	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|84489819|ref|YP_448051.1|	-	0.0011	19.1	0.1	0.0022	18.1	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
CdAMP_rec	PF06153.11	gi|84489819|ref|YP_448051.1|	-	0.018	15.2	0.1	0.17	12.1	0.0	2.1	2	0	0	2	2	2	0	Cyclic-di-AMP	receptor
Fer4_12	PF13353.6	gi|84489819|ref|YP_448051.1|	-	0.024	14.9	0.1	0.039	14.2	0.1	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF211	PF02680.14	gi|84489819|ref|YP_448051.1|	-	0.1	12.8	2.1	4	7.7	0.1	2.9	3	0	0	3	3	3	0	Uncharacterized	ArCR,	COG1888
DUF2478	PF10649.9	gi|84489819|ref|YP_448051.1|	-	0.21	11.2	0.0	0.37	10.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2478)
DUF2113	PF09886.9	gi|84489820|ref|YP_448052.1|	-	5e-65	218.3	1.3	5.6e-65	218.2	1.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2113)
BcrAD_BadFG	PF01869.20	gi|84489821|ref|YP_448053.1|	-	9.3e-56	189.3	8.5	1.3e-55	188.8	8.5	1.2	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|84489821|ref|YP_448053.1|	-	0.0072	16.7	3.0	0.13	12.7	3.0	2.8	1	1	0	1	1	1	1	Cell	division	protein	FtsA
CGGC	PF08821.11	gi|84489821|ref|YP_448053.1|	-	0.015	15.5	0.0	0.034	14.3	0.0	1.6	1	0	0	1	1	1	0	CGGC	domain
DUF2112	PF09885.9	gi|84489822|ref|YP_448054.1|	-	1.5e-64	216.3	0.0	1.7e-64	216.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2112)
DUF2112	PF09885.9	gi|84489823|ref|YP_448055.1|	-	3.8e-55	185.9	0.0	4.6e-55	185.6	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2112)
DUF2102	PF09875.9	gi|84489824|ref|YP_448056.1|	-	1.5e-39	133.9	0.0	1.8e-39	133.6	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
Cyclophil_like	PF04126.13	gi|84489825|ref|YP_448057.1|	-	0.032	14.1	0.1	0.99	9.2	0.0	2.6	2	0	0	2	2	2	0	Cyclophilin-like
DUF4349	PF14257.6	gi|84489826|ref|YP_448058.1|	-	0.05	13.0	0.1	0.061	12.8	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4349)
AIRS	PF00586.24	gi|84489827|ref|YP_448059.1|	-	3.8e-18	65.9	1.8	2.5e-17	63.3	0.5	2.2	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|84489827|ref|YP_448059.1|	-	1.4e-16	61.0	0.0	2e-16	60.5	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
DUF2117	PF09890.9	gi|84489828|ref|YP_448060.1|	-	1.3e-73	247.0	4.6	1.3e-73	247.0	4.6	1.5	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
YajC	PF02699.15	gi|84489828|ref|YP_448060.1|	-	0.11	12.4	0.5	0.28	11.1	0.5	1.7	1	0	0	1	1	1	0	Preprotein	translocase	subunit
PIN_6	PF17146.4	gi|84489829|ref|YP_448061.1|	-	1.9e-06	28.3	0.3	4e-06	27.2	0.1	1.6	2	0	0	2	2	2	1	PIN	domain	of	ribonuclease
ADK_lid	PF05191.14	gi|84489829|ref|YP_448061.1|	-	0.0021	18.0	2.0	0.0046	16.9	2.0	1.6	1	0	0	1	1	1	1	Adenylate	kinase,	active	site	lid
NOB1_Zn_bind	PF08772.11	gi|84489829|ref|YP_448061.1|	-	0.021	15.0	2.2	0.03	14.5	1.3	1.7	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HypA	PF01155.19	gi|84489829|ref|YP_448061.1|	-	0.028	14.4	0.5	0.05	13.6	0.5	1.6	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-FPG_IleRS	PF06827.14	gi|84489829|ref|YP_448061.1|	-	0.03	14.2	0.1	0.074	12.9	0.1	1.7	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
PIN_4	PF13638.6	gi|84489829|ref|YP_448061.1|	-	0.038	14.3	0.2	0.049	13.9	0.2	1.3	1	0	0	1	1	1	0	PIN	domain
Prok-RING_1	PF14446.6	gi|84489829|ref|YP_448061.1|	-	0.038	13.9	0.5	0.079	12.9	0.5	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
PB1	PF00564.24	gi|84489829|ref|YP_448061.1|	-	0.049	13.6	1.0	0.15	12.0	1.0	1.9	1	1	0	1	1	1	0	PB1	domain
DZR	PF12773.7	gi|84489829|ref|YP_448061.1|	-	0.068	13.2	0.4	0.12	12.4	0.4	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
PRC	PF05239.16	gi|84489830|ref|YP_448062.1|	-	1.9e-13	50.2	1.9	2.4e-13	49.9	1.9	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
DUF2783	PF10932.8	gi|84489830|ref|YP_448062.1|	-	0.067	12.9	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2783)
Pribosyltran	PF00156.27	gi|84489831|ref|YP_448063.1|	-	3.6e-18	65.6	0.4	4.5e-18	65.3	0.4	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|84489831|ref|YP_448063.1|	-	0.0012	18.4	0.0	0.002	17.6	0.0	1.4	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRC	PF05239.16	gi|84489832|ref|YP_448064.1|	-	4.1e-13	49.2	7.7	3.4e-08	33.4	0.6	2.1	2	0	0	2	2	2	2	PRC-barrel	domain
NOP19	PF10863.8	gi|84489832|ref|YP_448064.1|	-	0.0048	16.7	3.9	0.049	13.5	0.4	2.2	2	0	0	2	2	2	2	Nucleolar	protein	19
ATG7_N	PF16420.5	gi|84489833|ref|YP_448065.1|	-	0.016	14.9	0.3	0.019	14.6	0.3	1.1	1	0	0	1	1	1	0	Ubiquitin-like	modifier-activating	enzyme	ATG7	N-terminus
LPD5	PF18799.1	gi|84489833|ref|YP_448065.1|	-	0.027	14.9	1.6	0.032	14.7	1.6	1.1	1	0	0	1	1	1	0	Large	polyvalent	protein-associated	domain	5
Citrate_bind	PF16114.5	gi|84489833|ref|YP_448065.1|	-	0.054	13.0	0.3	0.067	12.7	0.3	1.1	1	0	0	1	1	1	0	ATP	citrate	lyase	citrate-binding
ABC1	PF03109.16	gi|84489833|ref|YP_448065.1|	-	0.071	13.3	0.7	0.42	10.8	0.1	1.9	1	1	1	2	2	2	0	ABC1	family
Uteroglobin	PF01099.17	gi|84489833|ref|YP_448065.1|	-	7.6	7.0	8.2	8.2	6.8	1.1	2.3	1	1	1	2	2	2	0	Uteroglobin	family
Big_3_5	PF16640.5	gi|84489834|ref|YP_448066.1|	-	5e-33	113.1	94.4	1.8e-12	47.3	9.6	5.8	3	1	1	5	5	5	4	Bacterial	Ig-like	domain	(group	3)
Transglut_core	PF01841.19	gi|84489834|ref|YP_448066.1|	-	7e-20	71.6	0.3	1.8e-19	70.3	0.3	1.7	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Peptidase_C71	PF12386.8	gi|84489834|ref|YP_448066.1|	-	3.3e-05	23.6	4.6	7e-05	22.5	1.6	3.0	2	0	0	2	2	2	1	Pseudomurein	endo-isopeptidase	Pei
SSrecog	PF03531.14	gi|84489834|ref|YP_448066.1|	-	0.0041	17.0	5.6	11	6.0	0.1	4.4	5	0	0	5	5	5	2	Structure-specific	recognition	protein	(SSRP1)
Cyclophil_like	PF04126.13	gi|84489834|ref|YP_448066.1|	-	0.011	15.5	1.5	39	4.1	0.0	4.8	2	2	4	6	6	6	0	Cyclophilin-like
DUF4554	PF15091.6	gi|84489834|ref|YP_448066.1|	-	1.3	7.9	9.4	4.9	5.9	7.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4554)
SMYLE_N	PF18615.1	gi|84489834|ref|YP_448066.1|	-	2.4	7.6	7.4	4.8	6.6	7.4	1.4	1	0	0	1	1	1	0	Short	myomegalin-like	EB1	binding	proteins,	N-terminal	domain
Macoilin	PF09726.9	gi|84489834|ref|YP_448066.1|	-	3.6	6.0	12.5	5.9	5.3	12.5	1.3	1	0	0	1	1	1	0	Macoilin	family
AMP-binding_C_2	PF14535.6	gi|84489835|ref|YP_448067.1|	-	9.9e-30	102.7	0.6	3e-29	101.2	0.3	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|84489835|ref|YP_448067.1|	-	2.2e-12	46.3	1.0	6e-12	44.9	1.0	1.8	1	1	0	1	1	1	1	AMP-binding	enzyme
GH3	PF03321.13	gi|84489835|ref|YP_448067.1|	-	0.087	11.7	0.1	0.67	8.7	0.0	2.2	2	1	0	2	2	2	0	GH3	auxin-responsive	promoter
ACT	PF01842.25	gi|84489836|ref|YP_448068.1|	-	8.6e-07	28.6	0.1	0.0033	17.2	0.0	2.3	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|84489836|ref|YP_448068.1|	-	0.00016	22.2	1.8	0.21	12.2	0.1	2.2	2	0	0	2	2	2	2	ACT	domain
POR	PF01558.18	gi|84489837|ref|YP_448069.1|	-	9.5e-38	130.0	0.0	1.1e-37	129.8	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_C	PF02775.21	gi|84489838|ref|YP_448070.1|	-	3.8e-25	88.4	0.1	7.2e-25	87.6	0.1	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|84489838|ref|YP_448070.1|	-	2.4e-13	50.4	0.0	3.7e-13	49.7	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|84489838|ref|YP_448070.1|	-	9.8e-07	28.3	17.7	6.6e-05	22.6	4.3	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489838|ref|YP_448070.1|	-	2.2e-06	28.1	8.7	0.0084	16.7	1.3	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489838|ref|YP_448070.1|	-	2.6e-05	24.2	15.5	0.00068	19.7	16.0	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489838|ref|YP_448070.1|	-	3.1e-05	23.8	21.6	0.0021	18.1	4.5	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
PFOR_II	PF17147.4	gi|84489838|ref|YP_448070.1|	-	7.6e-05	23.0	0.0	0.00029	21.1	0.0	2.0	2	0	0	2	2	2	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Fer4_2	PF12797.7	gi|84489838|ref|YP_448070.1|	-	8.5e-05	22.4	18.7	0.0019	18.2	1.4	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84489838|ref|YP_448070.1|	-	0.00042	20.4	16.2	0.00099	19.2	16.2	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Transketolase_C	PF02780.20	gi|84489838|ref|YP_448070.1|	-	0.0022	17.9	0.0	0.007	16.2	0.0	1.8	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Fer4_16	PF13484.6	gi|84489838|ref|YP_448070.1|	-	0.0049	17.8	12.6	0.0071	17.3	4.1	2.7	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|84489838|ref|YP_448070.1|	-	0.0057	16.8	16.2	0.021	15.0	14.0	2.5	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84489838|ref|YP_448070.1|	-	0.093	13.3	20.4	0.19	12.3	4.7	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84489838|ref|YP_448070.1|	-	0.17	12.4	14.1	0.58	10.7	1.9	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|84489838|ref|YP_448070.1|	-	0.24	12.0	14.2	0.76	10.4	2.1	2.8	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489838|ref|YP_448070.1|	-	0.44	10.8	14.2	1.1	9.5	14.2	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84489838|ref|YP_448070.1|	-	0.62	10.5	15.4	1.2	9.6	2.8	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84489838|ref|YP_448070.1|	-	5.4	8.2	23.0	0.18	12.8	6.2	3.1	3	1	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|84489838|ref|YP_448070.1|	-	5.4	7.8	9.0	6.5	7.6	0.7	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
CCG	PF02754.16	gi|84489839|ref|YP_448071.1|	-	1.4e-40	137.4	0.1	5.4e-22	77.8	0.0	2.7	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer2_3	PF13085.6	gi|84489839|ref|YP_448071.1|	-	3.8e-31	107.3	0.5	3.8e-31	107.3	0.5	2.3	3	0	0	3	3	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.6	gi|84489839|ref|YP_448071.1|	-	5.2e-11	42.8	3.1	5.2e-11	42.8	3.1	2.7	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84489839|ref|YP_448071.1|	-	6.3e-08	33.0	4.5	6.3e-08	33.0	4.5	3.7	4	0	0	4	4	3	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489839|ref|YP_448071.1|	-	2.9e-07	30.7	3.0	0.011	15.9	0.1	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489839|ref|YP_448071.1|	-	2.1e-06	27.7	5.8	2.1e-06	27.7	5.8	3.3	4	1	0	4	4	4	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|84489839|ref|YP_448071.1|	-	7.4e-06	25.8	0.1	7.4e-06	25.8	0.1	2.3	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.7	gi|84489839|ref|YP_448071.1|	-	0.00029	21.4	17.2	0.00063	20.3	9.6	4.1	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84489839|ref|YP_448071.1|	-	0.00033	20.8	17.6	0.0007	19.7	10.8	4.1	4	1	1	5	5	4	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84489839|ref|YP_448071.1|	-	0.0016	18.9	8.8	0.27	11.8	0.2	3.5	4	0	0	4	4	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Peptidase_C3	PF00548.20	gi|84489839|ref|YP_448071.1|	-	0.015	15.3	0.1	0.033	14.1	0.1	1.6	1	0	0	1	1	1	0	3C	cysteine	protease	(picornain	3C)
Fer4_22	PF17179.4	gi|84489839|ref|YP_448071.1|	-	0.046	14.6	12.6	0.39	11.6	0.7	4.6	5	0	0	5	5	5	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84489839|ref|YP_448071.1|	-	0.11	13.3	0.1	0.11	13.3	0.1	2.8	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
DUF5314	PF17241.2	gi|84489839|ref|YP_448071.1|	-	0.11	12.1	0.5	1.3	8.6	0.1	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5314)
Fer4_21	PF14697.6	gi|84489839|ref|YP_448071.1|	-	0.2	11.8	16.5	0.16	12.1	0.4	3.6	4	0	0	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|84489839|ref|YP_448071.1|	-	0.64	9.8	12.2	0.7	9.7	0.7	3.0	2	1	1	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_2	PF12797.7	gi|84489839|ref|YP_448071.1|	-	2.2	8.6	24.5	0.31	11.2	2.5	4.4	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84489839|ref|YP_448071.1|	-	2.9	8.9	20.3	1	10.4	12.6	3.8	3	1	1	4	4	3	0	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|84489839|ref|YP_448071.1|	-	9.5	6.2	31.5	0.038	13.8	2.2	4.3	5	0	0	5	5	5	0	4Fe-4S	binding	domain
YbjQ_1	PF01906.17	gi|84489840|ref|YP_448072.1|	-	8.1e-36	122.8	1.1	8.9e-36	122.7	1.1	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
DUF4156	PF13698.6	gi|84489840|ref|YP_448072.1|	-	0.016	15.5	0.1	0.027	14.8	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4156)
DUF308	PF03729.13	gi|84489841|ref|YP_448073.1|	-	1.2e-10	41.6	45.2	1.7e-06	28.3	20.0	3.1	2	1	1	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
SpoU_methylase	PF00588.19	gi|84489842|ref|YP_448074.1|	-	3e-34	118.2	0.0	6.7e-34	117.1	0.0	1.5	2	0	0	2	2	2	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.9	gi|84489842|ref|YP_448074.1|	-	0.00056	19.8	0.0	0.015	15.2	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
DCD	PF06559.11	gi|84489843|ref|YP_448075.1|	-	2e-20	72.9	0.0	3.2e-12	45.9	0.0	2.1	1	1	1	2	2	2	2	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
dUTPase	PF00692.19	gi|84489843|ref|YP_448075.1|	-	2e-16	59.9	0.0	3.9e-16	58.9	0.0	1.4	2	0	0	2	2	2	1	dUTPase
HGTP_anticodon	PF03129.20	gi|84489844|ref|YP_448076.1|	-	1.7e-19	69.8	0.1	3.5e-19	68.8	0.1	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|84489844|ref|YP_448076.1|	-	8.5e-11	42.1	0.2	1.8e-10	41.1	0.2	1.7	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2	PF00152.20	gi|84489844|ref|YP_448076.1|	-	0.00095	18.3	0.1	0.7	8.9	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	(D,	K	and	N)
SWIRM	PF04433.17	gi|84489844|ref|YP_448076.1|	-	0.0058	17.0	0.4	0.05	14.0	0.1	2.4	2	0	0	2	2	2	1	SWIRM	domain
DZR	PF12773.7	gi|84489844|ref|YP_448076.1|	-	0.036	14.1	0.1	1.8	8.6	0.0	2.2	2	0	0	2	2	2	0	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|84489844|ref|YP_448076.1|	-	0.14	12.9	0.5	0.29	11.9	0.5	1.4	1	0	0	1	1	1	0	zinc-ribbon	family
TatD_DNase	PF01026.21	gi|84489845|ref|YP_448077.1|	-	5e-17	62.1	0.4	6e-17	61.9	0.4	1.1	1	0	0	1	1	1	1	TatD	related	DNase
DZR	PF12773.7	gi|84489846|ref|YP_448078.1|	-	0.0048	16.9	0.9	0.0097	15.9	0.9	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|84489846|ref|YP_448078.1|	-	0.012	15.5	1.4	0.02	14.8	1.4	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Ribosomal_L37e	PF01907.19	gi|84489846|ref|YP_448078.1|	-	0.016	15.4	5.2	0.036	14.2	5.2	1.7	1	1	0	1	1	1	0	Ribosomal	protein	L37e
A2L_zn_ribbon	PF08792.10	gi|84489846|ref|YP_448078.1|	-	0.027	14.2	2.9	1.3	8.8	0.2	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|84489846|ref|YP_448078.1|	-	0.029	14.1	3.0	2	8.2	0.4	2.5	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
UPF0547	PF10571.9	gi|84489846|ref|YP_448078.1|	-	0.04	14.0	4.9	2.3	8.3	0.4	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
NRDD	PF13597.6	gi|84489846|ref|YP_448078.1|	-	0.06	12.1	0.8	0.061	12.1	0.8	1.2	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
Cyto_heme_lyase	PF01265.17	gi|84489846|ref|YP_448078.1|	-	0.093	12.3	0.0	0.12	11.9	0.0	1.0	1	0	0	1	1	1	0	Cytochrome	c/c1	heme	lyase
Tnp_zf-ribbon_2	PF13842.6	gi|84489846|ref|YP_448078.1|	-	0.11	13.4	3.2	0.84	10.5	0.6	2.3	2	0	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
PhnA_Zn_Ribbon	PF08274.12	gi|84489846|ref|YP_448078.1|	-	0.38	10.8	3.3	0.88	9.6	0.1	2.7	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
zinc_ribbon_2	PF13240.6	gi|84489846|ref|YP_448078.1|	-	0.55	10.0	9.5	0.41	10.4	5.8	2.5	2	1	1	3	3	3	0	zinc-ribbon	domain
DUF2614	PF11023.8	gi|84489846|ref|YP_448078.1|	-	0.9	9.7	4.9	5.8	7.0	1.8	2.1	2	0	0	2	2	2	0	Zinc-ribbon	containing	domain
zf-ribbon_3	PF13248.6	gi|84489846|ref|YP_448078.1|	-	1.3	8.5	7.2	0.44	10.0	0.5	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
SepF	PF04472.12	gi|84489847|ref|YP_448079.1|	-	0.0029	17.9	0.6	0.0043	17.3	0.1	1.5	2	0	0	2	2	2	1	Cell	division	protein	SepF
DUF1611	PF07755.11	gi|84489848|ref|YP_448080.1|	-	3e-56	189.9	0.0	4.1e-56	189.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
DUF1611_N	PF17396.2	gi|84489848|ref|YP_448080.1|	-	4.3e-14	52.5	0.0	9.7e-14	51.4	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
STALD	PF18185.1	gi|84489848|ref|YP_448080.1|	-	0.075	12.4	0.0	0.16	11.3	0.0	1.5	1	0	0	1	1	1	0	Sir2-	and	TIR-associating	SLOG	family
PglD_N	PF17836.1	gi|84489848|ref|YP_448080.1|	-	0.81	10.4	2.8	2.8	8.7	2.8	1.9	1	1	0	1	1	1	0	PglD	N-terminal	domain
SIS	PF01380.22	gi|84489849|ref|YP_448081.1|	-	1.5e-27	96.0	0.3	2e-22	79.5	0.2	2.2	2	0	0	2	2	2	2	SIS	domain
DUF4918	PF16265.5	gi|84489849|ref|YP_448081.1|	-	0.018	14.6	0.2	0.037	13.6	0.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4918)
CbiJ	PF02571.14	gi|84489849|ref|YP_448081.1|	-	0.065	12.7	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	Precorrin-6x	reductase	CbiJ/CobK
CAMSAP_CC1	PF17095.5	gi|84489849|ref|YP_448081.1|	-	0.13	12.1	0.8	0.28	11.1	0.8	1.5	1	0	0	1	1	1	0	Spectrin-binding	region	of	Ca2+-Calmodulin
TM2	PF05154.16	gi|84489850|ref|YP_448082.1|	-	0.00013	22.2	5.0	0.00013	22.2	5.0	2.1	2	0	0	2	2	2	1	TM2	domain
zinc_ribbon_2	PF13240.6	gi|84489850|ref|YP_448082.1|	-	0.00054	19.6	2.3	0.00078	19.1	2.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84489850|ref|YP_448082.1|	-	0.0051	16.8	0.0	0.0058	16.6	0.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
DUF2628	PF10947.8	gi|84489850|ref|YP_448082.1|	-	0.038	14.3	3.1	0.051	13.9	3.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
DUF2116	PF09889.9	gi|84489850|ref|YP_448082.1|	-	0.095	12.7	0.3	0.095	12.7	0.3	2.6	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zf-BED	PF02892.15	gi|84489850|ref|YP_448082.1|	-	1.6	8.8	5.7	0.21	11.6	1.2	1.8	1	1	1	2	2	2	0	BED	zinc	finger
Phtf-FEM1B_bdg	PF12129.8	gi|84489850|ref|YP_448082.1|	-	2	8.2	12.3	0.071	12.9	3.3	1.9	1	1	1	2	2	2	0	Male	germ-cell	putative	homeodomain	transcription	factor
DZR	PF12773.7	gi|84489851|ref|YP_448083.1|	-	0.011	15.7	0.8	0.018	15.0	0.8	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|84489851|ref|YP_448083.1|	-	0.029	14.1	3.8	0.079	12.7	3.8	1.8	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-BED	PF02892.15	gi|84489851|ref|YP_448083.1|	-	1.2	9.2	7.1	5.1	7.2	0.3	2.6	1	1	1	2	2	2	0	BED	zinc	finger
SfsA	PF03749.13	gi|84489852|ref|YP_448084.1|	-	4.3e-45	153.0	0.0	5.7e-45	152.6	0.0	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein	RE	domain
SfsA_N	PF17746.1	gi|84489852|ref|YP_448084.1|	-	5.9e-19	68.0	0.0	1e-18	67.2	0.0	1.4	1	0	0	1	1	1	1	SfsA	N-terminal	OB	domain
mRNA_decap_C	PF16741.5	gi|84489852|ref|YP_448084.1|	-	0.0053	16.0	0.8	0.013	14.8	0.0	2.1	2	0	0	2	2	2	1	mRNA-decapping	enzyme	C-terminus
DZR	PF12773.7	gi|84489853|ref|YP_448085.1|	-	0.00026	21.0	0.7	0.0004	20.4	0.7	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|84489853|ref|YP_448085.1|	-	0.00072	19.2	6.0	0.00072	19.2	6.0	2.1	3	0	0	3	3	3	1	zinc-ribbon	domain
TM2	PF05154.16	gi|84489853|ref|YP_448085.1|	-	0.0042	17.4	1.4	0.0054	17.0	1.4	1.3	1	0	0	1	1	1	1	TM2	domain
zf-RanBP	PF00641.18	gi|84489853|ref|YP_448085.1|	-	0.72	9.2	4.6	1.3	8.5	4.6	1.4	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
SWIM	PF04434.17	gi|84489854|ref|YP_448086.1|	-	0.0015	18.1	0.7	0.0027	17.3	0.7	1.3	1	0	0	1	1	1	1	SWIM	zinc	finger
DUF2430	PF10353.9	gi|84489854|ref|YP_448086.1|	-	0.013	15.9	0.4	0.016	15.6	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2430)
Lar_restr_allev	PF14354.6	gi|84489855|ref|YP_448087.1|	-	1.1e-05	25.7	0.4	1.4e-05	25.4	0.4	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.6	gi|84489855|ref|YP_448087.1|	-	1.7e-05	24.0	1.6	0.029	13.8	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|84489855|ref|YP_448087.1|	-	8.7e-05	22.6	2.1	0.2	11.8	0.2	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|84489855|ref|YP_448087.1|	-	9.6e-05	22.2	0.4	0.0033	17.3	0.0	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
Prim_Zn_Ribbon	PF08273.12	gi|84489855|ref|YP_448087.1|	-	0.00032	20.9	1.8	0.00046	20.4	1.8	1.2	1	0	0	1	1	1	1	Zinc-binding	domain	of	primase-helicase
TF_Zn_Ribbon	PF08271.12	gi|84489855|ref|YP_448087.1|	-	0.00036	20.0	3.7	0.0068	15.9	3.7	2.2	1	1	0	1	1	1	1	TFIIB	zinc-binding
zinc_ribbon_5	PF13719.6	gi|84489855|ref|YP_448087.1|	-	0.0013	18.5	1.9	0.0067	16.2	1.9	2.0	1	1	0	1	1	1	1	zinc-ribbon	domain
Ogr_Delta	PF04606.12	gi|84489855|ref|YP_448087.1|	-	0.0026	17.7	1.0	2	8.5	0.0	2.1	2	0	0	2	2	2	2	Ogr/Delta-like	zinc	finger
OrfB_Zn_ribbon	PF07282.11	gi|84489855|ref|YP_448087.1|	-	0.0035	17.2	2.8	0.019	14.9	2.6	2.0	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.7	gi|84489855|ref|YP_448087.1|	-	0.0056	16.7	0.2	0.0081	16.2	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Nudix_N_2	PF14803.6	gi|84489855|ref|YP_448087.1|	-	0.015	15.2	1.2	4.4	7.3	0.2	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
zf-tcix	PF14952.6	gi|84489855|ref|YP_448087.1|	-	0.016	14.8	2.0	0.79	9.4	0.2	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
UPF0547	PF10571.9	gi|84489855|ref|YP_448087.1|	-	0.019	15.0	6.5	0.3	11.2	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-FPG_IleRS	PF06827.14	gi|84489855|ref|YP_448087.1|	-	0.019	14.8	2.0	3.3	7.7	0.4	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
YhfH	PF14149.6	gi|84489855|ref|YP_448087.1|	-	0.02	14.8	1.3	1.1	9.3	0.1	2.4	2	0	0	2	2	2	0	YhfH-like	protein
TFIIS_C	PF01096.18	gi|84489855|ref|YP_448087.1|	-	0.023	14.5	1.9	3.5	7.6	0.3	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Trm112p	PF03966.16	gi|84489855|ref|YP_448087.1|	-	0.033	14.8	0.7	0.063	13.9	0.7	1.6	1	1	0	1	1	1	0	Trm112p-like	protein
HalOD2	PF18547.1	gi|84489855|ref|YP_448087.1|	-	0.035	14.0	0.6	0.07	13.0	0.6	1.4	1	1	0	1	1	1	0	Halobacterial	output	domain	2
zinc_ribbon_2	PF13240.6	gi|84489855|ref|YP_448087.1|	-	0.036	13.8	6.3	1.2	8.9	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-RRN7	PF11781.8	gi|84489855|ref|YP_448087.1|	-	0.039	13.7	1.0	0.39	10.4	0.0	2.2	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Elf1	PF05129.13	gi|84489855|ref|YP_448087.1|	-	0.045	13.8	0.7	0.068	13.2	0.6	1.4	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Terminase_GpA	PF05876.12	gi|84489855|ref|YP_448087.1|	-	0.056	12.0	0.2	0.063	11.8	0.2	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
DUF35_N	PF12172.8	gi|84489855|ref|YP_448087.1|	-	0.064	13.1	1.6	8.4	6.4	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF951	PF06107.11	gi|84489855|ref|YP_448087.1|	-	0.072	13.0	1.3	0.13	12.1	1.3	1.8	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF951)
zf-IS66	PF13005.7	gi|84489855|ref|YP_448087.1|	-	0.077	13.4	1.2	7.2	7.1	0.2	2.2	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DNA_RNApol_7kD	PF03604.13	gi|84489855|ref|YP_448087.1|	-	0.078	12.7	1.9	2.7	7.7	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2387	PF09526.10	gi|84489855|ref|YP_448087.1|	-	0.08	13.1	1.2	0.13	12.4	1.2	1.4	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1595	PF12760.7	gi|84489855|ref|YP_448087.1|	-	0.11	12.5	3.7	0.25	11.3	3.2	1.8	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.6	gi|84489855|ref|YP_448087.1|	-	0.11	13.2	1.6	0.86	10.3	0.3	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2	PF00096.26	gi|84489855|ref|YP_448087.1|	-	0.15	12.5	1.4	3.4	8.3	0.0	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Rubredoxin_2	PF18073.1	gi|84489855|ref|YP_448087.1|	-	1	9.2	5.6	2.9	7.7	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
PADR1	PF08063.12	gi|84489855|ref|YP_448087.1|	-	2.3	8.1	5.8	2.1	8.2	0.8	2.0	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
Fer4	PF00037.27	gi|84489856|ref|YP_448088.1|	-	6.8e-12	44.7	15.2	2.2e-10	39.9	3.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84489856|ref|YP_448088.1|	-	2.6e-08	34.3	9.0	4e-08	33.7	9.0	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84489856|ref|YP_448088.1|	-	7.3e-08	32.2	2.2	7.3e-08	32.2	2.2	2.1	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84489856|ref|YP_448088.1|	-	3.4e-07	30.3	8.1	4e-07	30.1	8.1	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84489856|ref|YP_448088.1|	-	6.2e-07	30.2	8.4	0.00066	20.6	3.1	2.0	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|84489856|ref|YP_448088.1|	-	6.4e-07	29.4	9.6	7.1e-07	29.3	9.6	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84489856|ref|YP_448088.1|	-	7.3e-07	29.2	8.3	1.4e-06	28.3	1.8	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84489856|ref|YP_448088.1|	-	1.3e-06	28.1	11.0	1.5e-06	27.9	1.3	2.1	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84489856|ref|YP_448088.1|	-	0.0016	18.9	2.9	0.0016	18.9	2.9	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|84489856|ref|YP_448088.1|	-	0.0024	18.3	4.3	0.0024	18.3	4.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|84489856|ref|YP_448088.1|	-	0.0035	18.2	5.3	0.0035	18.2	5.3	2.1	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84489856|ref|YP_448088.1|	-	0.0084	16.5	11.8	0.01	16.3	4.1	2.1	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84489856|ref|YP_448088.1|	-	0.014	16.1	3.5	0.014	16.1	3.5	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|84489856|ref|YP_448088.1|	-	0.015	15.9	3.1	0.015	15.9	3.1	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84489856|ref|YP_448088.1|	-	0.043	14.0	3.3	0.043	14.0	3.3	1.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84489856|ref|YP_448088.1|	-	1.1	10.2	10.3	0.15	12.9	1.6	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.19	gi|84489857|ref|YP_448089.1|	-	9.1e-18	64.6	1.0	9.7e-17	61.2	1.0	2.4	1	1	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|84489857|ref|YP_448089.1|	-	1.8e-09	37.7	1.2	0.00073	19.2	0.5	2.5	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|84489857|ref|YP_448089.1|	-	2.7e-08	33.1	0.0	1.8e-05	23.8	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.7	gi|84489857|ref|YP_448089.1|	-	2.8e-07	30.2	1.8	2.3e-06	27.3	1.9	2.1	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|84489857|ref|YP_448089.1|	-	1.2e-06	27.9	0.2	2.8e-05	23.4	0.1	2.3	2	0	0	2	2	2	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|84489857|ref|YP_448089.1|	-	5.7e-06	25.3	0.6	1.6e-05	23.8	0.1	1.9	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|84489857|ref|YP_448089.1|	-	1.3e-05	25.3	0.1	4.4e-05	23.6	0.1	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|84489857|ref|YP_448089.1|	-	0.0001	21.6	0.4	0.00054	19.3	0.4	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|84489857|ref|YP_448089.1|	-	0.00022	20.4	0.0	0.016	14.3	0.4	2.5	2	1	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.27	gi|84489857|ref|YP_448089.1|	-	0.00043	20.8	0.3	0.0057	17.2	0.1	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|84489857|ref|YP_448089.1|	-	0.00077	18.8	0.3	0.064	12.5	0.0	2.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|84489857|ref|YP_448089.1|	-	0.0017	17.5	0.4	0.0017	17.5	0.4	2.1	2	1	0	2	2	2	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|84489857|ref|YP_448089.1|	-	0.0042	16.4	1.2	0.0077	15.5	0.1	2.0	3	0	0	3	3	3	1	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|84489857|ref|YP_448089.1|	-	0.035	13.4	0.2	0.11	11.8	0.1	1.8	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|84489857|ref|YP_448089.1|	-	0.11	12.4	0.0	0.31	10.9	0.0	1.8	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|84489857|ref|YP_448089.1|	-	0.15	12.0	0.1	1.3	9.0	0.1	2.1	1	1	0	1	1	1	0	FAD-NAD(P)-binding
DUF5591	PF17884.1	gi|84489858|ref|YP_448090.1|	-	2.8e-43	147.5	0.0	3.9e-43	147.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
PUA	PF01472.20	gi|84489858|ref|YP_448090.1|	-	2.2e-12	46.7	0.1	4e-12	45.9	0.1	1.4	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.6	gi|84489858|ref|YP_448090.1|	-	4.7e-07	29.8	0.0	9.3e-07	28.9	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
Yqai	PF09466.10	gi|84489858|ref|YP_448090.1|	-	1.1	9.7	4.0	2.2	8.7	2.5	2.0	1	1	1	2	2	2	0	Hypothetical	protein	Yqai
FeS_assembly_P	PF01883.19	gi|84489859|ref|YP_448091.1|	-	6.4e-15	55.1	0.5	7.8e-15	54.8	0.5	1.1	1	0	0	1	1	1	1	Iron-sulfur	cluster	assembly	protein
Glyco_transf_28	PF03033.20	gi|84489860|ref|YP_448092.1|	-	1.3e-05	25.2	0.3	2.2e-05	24.5	0.3	1.3	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
Glyco_trans_1_4	PF13692.6	gi|84489860|ref|YP_448092.1|	-	0.0091	16.4	0.2	0.024	15.1	0.0	1.8	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84489860|ref|YP_448092.1|	-	0.011	15.3	0.1	0.022	14.3	0.1	1.5	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Epimerase_2	PF02350.19	gi|84489860|ref|YP_448092.1|	-	0.023	13.5	0.7	0.038	12.8	0.0	1.6	2	0	0	2	2	2	0	UDP-N-acetylglucosamine	2-epimerase
LacAB_rpiB	PF02502.18	gi|84489860|ref|YP_448092.1|	-	0.078	13.0	0.1	0.24	11.4	0.1	1.8	2	0	0	2	2	2	0	Ribose/Galactose	Isomerase
HupF_HypC	PF01455.18	gi|84489861|ref|YP_448093.1|	-	3.1e-24	84.9	0.1	3.5e-24	84.7	0.1	1.0	1	0	0	1	1	1	1	HupF/HypC	family
ABC2_membrane_3	PF12698.7	gi|84489862|ref|YP_448094.1|	-	3.7e-42	144.7	25.3	6.7e-42	143.8	25.3	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|84489862|ref|YP_448094.1|	-	2e-05	24.1	19.1	2e-05	24.1	19.1	2.1	2	1	0	2	2	2	1	ABC-2	type	transporter
ACT	PF01842.25	gi|84489863|ref|YP_448095.1|	-	9.3e-06	25.3	0.2	3e-05	23.7	0.0	1.9	2	0	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|84489863|ref|YP_448095.1|	-	0.017	15.7	0.6	0.079	13.6	0.0	2.4	2	2	1	3	3	3	0	ACT	domain
ACT_7	PF13840.6	gi|84489863|ref|YP_448095.1|	-	0.018	14.9	0.0	0.038	13.8	0.0	1.5	1	0	0	1	1	1	0	ACT	domain
zf-C2H2_aberr	PF17017.5	gi|84489863|ref|YP_448095.1|	-	0.11	12.6	0.3	0.14	12.3	0.3	1.2	1	0	0	1	1	1	0	Aberrant	zinc-finger
Chorismate_bind	PF00425.18	gi|84489864|ref|YP_448096.1|	-	2.3e-92	309.2	0.0	3.1e-92	308.8	0.0	1.2	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|84489864|ref|YP_448096.1|	-	1.6e-24	86.7	4.1	2.5e-23	82.8	0.5	2.9	2	1	0	2	2	2	2	Anthranilate	synthase	component	I,	N	terminal	region
GATase	PF00117.28	gi|84489865|ref|YP_448097.1|	-	1.3e-44	152.2	0.0	1.6e-44	152.0	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|84489865|ref|YP_448097.1|	-	3.9e-11	43.1	0.0	1.9e-10	40.9	0.0	1.8	1	1	0	1	1	1	1	Peptidase	C26
NBD94	PF16830.5	gi|84489865|ref|YP_448097.1|	-	0.1	13.0	1.1	0.29	11.6	1.1	1.7	1	0	0	1	1	1	0	Nucleotide-Binding	Domain	94	of	RH
IGPS	PF00218.21	gi|84489866|ref|YP_448098.1|	-	1.3e-60	204.7	2.5	1.6e-60	204.4	2.5	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
QRPTase_C	PF01729.19	gi|84489866|ref|YP_448098.1|	-	8.4e-06	25.7	0.4	0.00019	21.3	0.1	2.2	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
His_biosynth	PF00977.21	gi|84489866|ref|YP_448098.1|	-	0.00054	19.5	0.0	0.00091	18.7	0.0	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|84489866|ref|YP_448098.1|	-	0.0057	15.9	1.1	0.35	10.0	0.0	3.0	2	2	2	4	4	4	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
IL3	PF02059.15	gi|84489866|ref|YP_448098.1|	-	0.012	15.7	4.4	1.9	8.6	0.3	3.1	3	0	0	3	3	3	0	Interleukin-3
DUF561	PF04481.12	gi|84489866|ref|YP_448098.1|	-	0.022	13.9	0.6	0.039	13.1	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
Dus	PF01207.17	gi|84489866|ref|YP_448098.1|	-	0.041	13.0	0.0	0.089	11.9	0.0	1.5	1	0	0	1	1	1	0	Dihydrouridine	synthase	(Dus)
FMN_dh	PF01070.18	gi|84489866|ref|YP_448098.1|	-	0.22	10.5	0.0	0.29	10.1	0.0	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
DUF2779	PF11074.8	gi|84489866|ref|YP_448098.1|	-	1.5	9.3	4.5	1.6	9.2	0.9	2.4	3	0	0	3	3	3	0	Domain	of	unknown	function(DUF2779)
PRAI	PF00697.22	gi|84489867|ref|YP_448099.1|	-	2.2e-16	60.2	0.0	3.2e-16	59.7	0.0	1.3	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
PALP	PF00291.25	gi|84489868|ref|YP_448100.1|	-	2.5e-43	148.6	0.1	3e-43	148.3	0.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Trp_syntA	PF00290.20	gi|84489869|ref|YP_448101.1|	-	3.2e-91	304.8	0.1	3.6e-91	304.6	0.1	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|84489869|ref|YP_448101.1|	-	5.8e-11	42.3	0.2	4.1e-10	39.5	0.1	2.3	2	1	1	3	3	3	1	Histidine	biosynthesis	protein
NMO	PF03060.15	gi|84489869|ref|YP_448101.1|	-	6.3e-08	32.4	0.1	1.9e-05	24.2	0.1	2.2	1	1	1	2	2	2	2	Nitronate	monooxygenase
PcrB	PF01884.17	gi|84489869|ref|YP_448101.1|	-	7.5e-07	28.8	0.4	0.00032	20.2	0.1	2.4	2	1	0	2	2	2	2	PcrB	family
ThiG	PF05690.14	gi|84489869|ref|YP_448101.1|	-	1.5e-05	24.5	0.1	6.9e-05	22.3	0.1	2.0	2	1	1	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.17	gi|84489869|ref|YP_448101.1|	-	0.0006	19.2	0.1	0.0022	17.3	0.1	1.9	2	1	1	3	3	3	1	Thiamine	monophosphate	synthase
NanE	PF04131.14	gi|84489869|ref|YP_448101.1|	-	0.0014	17.8	0.1	0.0073	15.5	0.1	2.1	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
FMN_dh	PF01070.18	gi|84489869|ref|YP_448101.1|	-	0.0042	16.2	0.0	0.0064	15.6	0.0	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
IGPS	PF00218.21	gi|84489869|ref|YP_448101.1|	-	0.0066	15.6	0.1	0.019	14.2	0.0	1.7	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
DUF561	PF04481.12	gi|84489869|ref|YP_448101.1|	-	0.04	13.1	0.4	0.28	10.3	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
Pterin_bind	PF00809.22	gi|84489869|ref|YP_448101.1|	-	0.043	13.5	0.0	0.14	11.8	0.0	1.7	2	0	0	2	2	2	0	Pterin	binding	enzyme
HMGL-like	PF00682.19	gi|84489869|ref|YP_448101.1|	-	0.059	12.9	0.0	1.3	8.5	0.0	2.2	2	1	0	2	2	2	0	HMGL-like
Dus	PF01207.17	gi|84489869|ref|YP_448101.1|	-	0.066	12.3	0.0	0.52	9.4	0.0	2.0	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
G3P_antiterm	PF04309.12	gi|84489869|ref|YP_448101.1|	-	0.074	12.5	0.0	0.17	11.3	0.0	1.6	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
IMPDH	PF00478.25	gi|84489869|ref|YP_448101.1|	-	0.092	11.7	0.1	0.76	8.7	0.1	2.0	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
Glycos_transf_3	PF00591.21	gi|84489870|ref|YP_448102.1|	-	7.7e-80	268.1	0.0	1e-79	267.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.17	gi|84489870|ref|YP_448102.1|	-	6.8e-16	57.9	0.0	1.4e-15	56.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Pyr_redox_2	PF07992.14	gi|84489871|ref|YP_448103.1|	-	7.5e-46	156.7	3.4	9.9e-46	156.3	3.4	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|84489871|ref|YP_448103.1|	-	9.4e-17	61.2	4.7	1.6e-16	60.5	4.7	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|84489871|ref|YP_448103.1|	-	2.8e-12	47.0	8.0	1.5e-08	35.1	0.1	3.6	4	0	0	4	4	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|84489871|ref|YP_448103.1|	-	2.7e-06	26.4	3.9	4.6e-06	25.6	0.8	2.5	2	1	2	4	4	4	1	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|84489871|ref|YP_448103.1|	-	3.7e-06	26.6	0.0	5.4e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.6	gi|84489871|ref|YP_448103.1|	-	1.9e-05	24.0	0.2	3.2e-05	23.3	0.0	1.4	2	0	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.21	gi|84489871|ref|YP_448103.1|	-	0.00011	21.6	2.5	0.066	12.5	0.3	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_2	PF00890.24	gi|84489871|ref|YP_448103.1|	-	0.00035	19.8	0.1	0.0046	16.1	0.0	2.4	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.22	gi|84489871|ref|YP_448103.1|	-	0.00075	18.7	2.0	0.00075	18.7	2.0	3.7	2	2	2	4	4	4	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|84489871|ref|YP_448103.1|	-	0.0022	18.2	1.1	0.0049	17.1	0.1	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|84489871|ref|YP_448103.1|	-	0.0081	15.4	0.1	0.027	13.7	0.0	1.9	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.24	gi|84489871|ref|YP_448103.1|	-	0.01	15.4	4.6	0.16	11.5	0.4	3.2	3	1	0	4	4	4	0	FAD	dependent	oxidoreductase
XdhC_C	PF13478.6	gi|84489871|ref|YP_448103.1|	-	0.014	15.8	0.0	7	7.2	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
NAD_binding_7	PF13241.6	gi|84489871|ref|YP_448103.1|	-	0.018	15.5	4.5	0.086	13.3	0.1	2.9	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Trp_halogenase	PF04820.14	gi|84489871|ref|YP_448103.1|	-	0.042	12.7	2.4	0.047	12.5	0.1	2.1	3	0	0	3	3	3	0	Tryptophan	halogenase
Glyco_trans_1_4	PF13692.6	gi|84489872|ref|YP_448104.1|	-	0.00065	20.1	0.0	0.0011	19.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84489872|ref|YP_448104.1|	-	0.0042	16.6	0.1	0.0069	15.9	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Epimerase_2	PF02350.19	gi|84489872|ref|YP_448104.1|	-	0.034	13.0	0.0	0.061	12.2	0.0	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
Glyco_transf_28	PF03033.20	gi|84489872|ref|YP_448104.1|	-	0.039	14.0	0.2	0.07	13.2	0.2	1.4	1	0	0	1	1	1	0	Glycosyltransferase	family	28	N-terminal	domain
Fe-ADH	PF00465.19	gi|84489872|ref|YP_448104.1|	-	0.11	11.3	1.0	0.21	10.4	0.4	1.7	2	0	0	2	2	2	0	Iron-containing	alcohol	dehydrogenase
Fer4_15	PF13459.6	gi|84489873|ref|YP_448105.1|	-	2.5e-16	60.1	8.5	2.8e-16	60.0	8.5	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|84489873|ref|YP_448105.1|	-	9e-08	32.5	4.6	1.3e-07	32.1	4.6	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4	PF00037.27	gi|84489873|ref|YP_448105.1|	-	0.018	14.9	1.4	0.018	14.9	1.4	2.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|84489873|ref|YP_448105.1|	-	0.052	13.6	0.9	0.24	11.5	0.9	1.9	1	1	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
DUF2116	PF09889.9	gi|84489873|ref|YP_448105.1|	-	0.18	11.8	3.0	2.6	8.1	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Fijivirus_P9-2	PF06837.11	gi|84489874|ref|YP_448106.1|	-	0.033	13.6	1.8	0.09	12.2	1.8	1.7	1	0	0	1	1	1	0	Fijivirus	P9-2	protein
eRF1_1	PF03463.15	gi|84489875|ref|YP_448107.1|	-	3.6e-28	98.1	0.3	6.5e-28	97.3	0.3	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.15	gi|84489875|ref|YP_448107.1|	-	8.9e-23	80.9	0.7	3.7e-22	78.9	0.3	2.3	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.15	gi|84489875|ref|YP_448107.1|	-	7e-12	45.8	0.2	1.6e-11	44.7	0.0	1.7	2	0	0	2	2	2	1	eRF1	domain	2
NAGidase	PF07555.13	gi|84489875|ref|YP_448107.1|	-	0.012	14.9	0.1	0.025	13.9	0.0	1.4	1	1	0	1	1	1	0	beta-N-acetylglucosaminidase
Phi-29_GP16_7	PF06720.11	gi|84489875|ref|YP_448107.1|	-	0.078	12.8	1.0	0.3	10.9	0.1	2.4	3	0	0	3	3	3	0	Bacteriophage	phi-29	early	protein	GP16.7
PDH	PF02153.17	gi|84489877|ref|YP_448109.1|	-	2e-55	187.6	0.1	2.6e-55	187.2	0.1	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
F420_oxidored	PF03807.17	gi|84489877|ref|YP_448109.1|	-	7.8e-11	42.4	0.0	2.2e-10	41.0	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|84489877|ref|YP_448109.1|	-	1.7e-06	28.3	0.0	8.9e-06	25.9	0.0	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
adh_short	PF00106.25	gi|84489877|ref|YP_448109.1|	-	0.00012	21.6	0.0	0.00028	20.4	0.0	1.6	1	0	0	1	1	1	1	short	chain	dehydrogenase
IlvN	PF07991.12	gi|84489877|ref|YP_448109.1|	-	0.00049	19.7	0.1	0.0019	17.8	0.1	2.0	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
FDX-ACB	PF03147.14	gi|84489877|ref|YP_448109.1|	-	0.00063	20.1	0.0	0.0096	16.3	0.0	2.6	2	0	0	2	2	2	1	Ferredoxin-fold	anticodon	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|84489877|ref|YP_448109.1|	-	0.0025	17.8	0.1	0.0073	16.3	0.1	1.8	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DpaA_N	PF16924.5	gi|84489877|ref|YP_448109.1|	-	0.032	14.3	0.0	0.09	12.9	0.0	1.8	1	0	0	1	1	1	0	Dipicolinate	synthase	subunit	A	N-terminal	domain
Semialdhyde_dh	PF01118.24	gi|84489877|ref|YP_448109.1|	-	0.045	14.2	0.0	0.1	13.0	0.0	1.6	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
DUF2634	PF10934.8	gi|84489877|ref|YP_448109.1|	-	0.16	12.1	2.2	0.39	10.8	2.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2634)
AAA	PF00004.29	gi|84489878|ref|YP_448110.1|	-	8.5e-100	330.4	0.0	1.2e-49	168.1	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|84489878|ref|YP_448110.1|	-	7.9e-31	105.6	3.9	4.5e-15	55.2	0.5	3.1	3	0	0	3	3	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|84489878|ref|YP_448110.1|	-	1.1e-26	92.8	0.1	1.2e-25	89.5	0.1	2.7	3	0	0	3	3	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.14	gi|84489878|ref|YP_448110.1|	-	1.6e-17	64.1	0.0	4.2e-09	36.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.17	gi|84489878|ref|YP_448110.1|	-	3.9e-17	61.8	0.2	1e-16	60.4	0.2	1.7	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_16	PF13191.6	gi|84489878|ref|YP_448110.1|	-	6.1e-15	56.0	0.8	3.5e-07	30.8	0.0	3.9	2	2	1	3	3	3	2	AAA	ATPase	domain
RuvB_N	PF05496.12	gi|84489878|ref|YP_448110.1|	-	8.2e-15	54.9	0.2	2e-07	30.9	0.0	2.9	2	2	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_33	PF13671.6	gi|84489878|ref|YP_448110.1|	-	3.1e-11	43.6	0.0	1.3e-05	25.4	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
TIP49	PF06068.13	gi|84489878|ref|YP_448110.1|	-	3.6e-11	42.9	1.3	5.7e-05	22.5	0.0	3.2	4	0	0	4	4	3	2	TIP49	P-loop	domain
AAA_14	PF13173.6	gi|84489878|ref|YP_448110.1|	-	8.2e-11	42.1	0.0	0.00044	20.3	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
AAA_22	PF13401.6	gi|84489878|ref|YP_448110.1|	-	1.2e-10	41.8	1.1	0.0016	18.7	0.0	4.1	2	2	1	3	3	3	2	AAA	domain
AAA_5	PF07728.14	gi|84489878|ref|YP_448110.1|	-	3.1e-10	40.2	1.3	9.1e-05	22.5	0.1	4.1	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.6	gi|84489878|ref|YP_448110.1|	-	2e-07	31.6	0.0	0.026	15.1	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|84489878|ref|YP_448110.1|	-	5e-07	29.6	0.2	0.033	13.9	0.0	3.4	3	1	0	3	3	2	2	Sigma-54	interaction	domain
AAA_3	PF07726.11	gi|84489878|ref|YP_448110.1|	-	5.5e-07	29.5	0.0	0.036	13.9	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|84489878|ref|YP_448110.1|	-	9.4e-07	28.7	0.0	0.024	14.4	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.12	gi|84489878|ref|YP_448110.1|	-	9.5e-07	28.3	0.1	0.046	13.0	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_28	PF13521.6	gi|84489878|ref|YP_448110.1|	-	1.7e-06	28.4	0.0	0.025	14.8	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.13	gi|84489878|ref|YP_448110.1|	-	2.3e-06	27.0	0.0	0.058	12.5	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
ATPase	PF06745.13	gi|84489878|ref|YP_448110.1|	-	2.5e-06	27.0	2.0	0.056	12.8	0.0	3.7	3	1	1	4	4	3	2	KaiC
AAA_7	PF12775.7	gi|84489878|ref|YP_448110.1|	-	2.5e-06	27.1	0.0	0.036	13.6	0.0	2.8	3	0	0	3	3	2	2	P-loop	containing	dynein	motor	region
DUF2075	PF09848.9	gi|84489878|ref|YP_448110.1|	-	2.5e-06	27.0	0.0	0.054	12.7	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_25	PF13481.6	gi|84489878|ref|YP_448110.1|	-	5.5e-06	26.1	1.0	1.6	8.2	0.0	4.2	4	0	0	4	4	4	2	AAA	domain
Mg_chelatase	PF01078.21	gi|84489878|ref|YP_448110.1|	-	5.7e-06	25.9	0.6	0.054	12.9	0.1	2.8	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.22	gi|84489878|ref|YP_448110.1|	-	9.2e-06	26.0	0.0	0.046	14.1	0.0	3.4	3	1	0	3	3	3	1	RNA	helicase
ABC_tran	PF00005.27	gi|84489878|ref|YP_448110.1|	-	1.2e-05	25.9	0.0	0.23	12.0	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
TsaE	PF02367.17	gi|84489878|ref|YP_448110.1|	-	1.7e-05	24.8	0.0	0.11	12.5	0.0	2.7	2	0	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Viral_helicase1	PF01443.18	gi|84489878|ref|YP_448110.1|	-	2.1e-05	24.4	0.0	0.0084	15.9	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_24	PF13479.6	gi|84489878|ref|YP_448110.1|	-	2.6e-05	24.1	0.0	0.078	12.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_30	PF13604.6	gi|84489878|ref|YP_448110.1|	-	7.2e-05	22.6	0.2	0.4	10.4	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
PhoH	PF02562.16	gi|84489878|ref|YP_448110.1|	-	8.1e-05	22.2	0.8	0.31	10.4	0.0	3.3	3	0	0	3	3	3	2	PhoH-like	protein
NB-ARC	PF00931.22	gi|84489878|ref|YP_448110.1|	-	0.00015	21.0	0.1	0.38	9.9	0.0	3.1	3	0	0	3	3	3	2	NB-ARC	domain
NACHT	PF05729.12	gi|84489878|ref|YP_448110.1|	-	0.00017	21.6	0.9	0.62	10.0	0.0	3.1	3	0	0	3	3	3	2	NACHT	domain
AAA_17	PF13207.6	gi|84489878|ref|YP_448110.1|	-	0.0002	21.8	0.1	1.9	8.9	0.0	3.4	3	0	0	3	3	3	2	AAA	domain
Bac_DnaA	PF00308.18	gi|84489878|ref|YP_448110.1|	-	0.00059	19.7	0.0	0.057	13.2	0.0	3.0	2	1	1	3	3	3	1	Bacterial	dnaA	protein
Vps4_C	PF09336.10	gi|84489878|ref|YP_448110.1|	-	0.0011	19.0	0.7	2.4	8.2	0.2	3.1	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_19	PF13245.6	gi|84489878|ref|YP_448110.1|	-	0.0018	18.7	1.5	3.1	8.1	0.0	3.1	2	1	0	3	3	2	1	AAA	domain
NTPase_1	PF03266.15	gi|84489878|ref|YP_448110.1|	-	0.002	18.0	3.0	0.61	10.0	0.1	3.7	3	2	0	3	3	2	1	NTPase
AAA_11	PF13086.6	gi|84489878|ref|YP_448110.1|	-	0.0021	17.9	0.0	0.13	12.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Parvo_NS1	PF01057.17	gi|84489878|ref|YP_448110.1|	-	0.0023	17.1	0.1	0.97	8.5	0.0	2.3	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
T2SSE	PF00437.20	gi|84489878|ref|YP_448110.1|	-	0.0025	16.9	0.0	0.98	8.4	0.1	2.9	2	1	1	3	3	3	1	Type	II/IV	secretion	system	protein
Sigma54_activ_2	PF14532.6	gi|84489878|ref|YP_448110.1|	-	0.0028	17.8	0.0	2.8	8.0	0.0	2.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
ResIII	PF04851.15	gi|84489878|ref|YP_448110.1|	-	0.0029	17.6	0.0	2.4	8.1	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
CPT	PF07931.12	gi|84489878|ref|YP_448110.1|	-	0.0078	16.1	0.3	8.5	6.2	0.0	3.2	2	1	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
DAP3	PF10236.9	gi|84489878|ref|YP_448110.1|	-	0.014	14.6	0.1	1.2	8.2	0.0	2.4	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
ATP-synt_ab	PF00006.25	gi|84489878|ref|YP_448110.1|	-	0.022	14.4	0.0	3.8	7.1	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
UFD1	PF03152.14	gi|84489878|ref|YP_448110.1|	-	0.03	13.8	0.3	0.49	9.9	0.4	2.5	1	1	1	2	2	2	0	Ubiquitin	fusion	degradation	protein	UFD1
cobW	PF02492.19	gi|84489878|ref|YP_448110.1|	-	0.049	13.2	0.6	12	5.5	0.1	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Torsin	PF06309.11	gi|84489878|ref|YP_448110.1|	-	0.056	13.5	0.0	3.6	7.7	0.0	2.5	2	0	0	2	2	2	0	Torsin
Cytidylate_kin2	PF13189.6	gi|84489878|ref|YP_448110.1|	-	0.064	13.4	0.1	6.6	6.8	0.0	2.8	3	0	0	3	3	3	0	Cytidylate	kinase-like	family
AAA_29	PF13555.6	gi|84489878|ref|YP_448110.1|	-	0.066	13.0	0.1	14	5.5	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Cytidylate_kin	PF02224.18	gi|84489878|ref|YP_448110.1|	-	0.13	12.0	0.5	3.4	7.3	0.0	3.1	4	0	0	4	4	3	0	Cytidylate	kinase
AdoHcyase	PF05221.17	gi|84489879|ref|YP_448111.1|	-	7.1e-56	189.5	0.0	2.9e-30	105.5	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|84489879|ref|YP_448111.1|	-	4.3e-51	173.2	2.8	5.6e-51	172.8	1.5	1.9	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|84489879|ref|YP_448111.1|	-	1.3e-11	44.2	0.1	2.6e-11	43.2	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|84489879|ref|YP_448111.1|	-	1.9e-07	30.8	0.1	3.2e-07	30.1	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|84489879|ref|YP_448111.1|	-	0.002	17.4	0.9	0.0042	16.4	0.9	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.17	gi|84489879|ref|YP_448111.1|	-	0.0071	16.9	0.1	0.018	15.6	0.1	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.18	gi|84489879|ref|YP_448111.1|	-	0.01	16.1	0.2	0.051	13.8	0.2	2.2	1	1	0	1	1	1	0	TrkA-N	domain
THF_DHG_CYH_C	PF02882.19	gi|84489879|ref|YP_448111.1|	-	0.027	13.8	0.4	0.068	12.5	0.4	1.7	1	1	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Shikimate_DH	PF01488.20	gi|84489879|ref|YP_448111.1|	-	0.029	14.4	0.0	0.063	13.3	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
zf-RNPHF	PF08080.12	gi|84489879|ref|YP_448111.1|	-	0.075	13.0	1.1	0.15	12.1	1.1	1.5	1	0	0	1	1	1	0	RNPHF	zinc	finger
XPG_I	PF00867.18	gi|84489880|ref|YP_448112.1|	-	1.3e-28	99.2	0.3	3.9e-28	97.6	0.1	2.0	2	0	0	2	2	2	1	XPG	I-region
XPG_N	PF00752.17	gi|84489880|ref|YP_448112.1|	-	3.2e-19	69.3	0.0	9.4e-19	67.8	0.0	1.8	2	0	0	2	2	2	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.20	gi|84489880|ref|YP_448112.1|	-	1.2e-07	32.2	0.1	6.1e-07	30.0	0.0	2.2	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
Glycos_transf_2	PF00535.26	gi|84489881|ref|YP_448113.1|	-	5.1e-26	91.5	0.5	3.1e-25	89.0	0.5	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84489881|ref|YP_448113.1|	-	6.4e-13	49.1	0.0	2.8e-12	47.0	0.0	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|84489881|ref|YP_448113.1|	-	0.00037	20.5	0.0	0.001	19.0	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_4	PF13704.6	gi|84489881|ref|YP_448113.1|	-	0.0091	16.5	0.7	0.0091	16.5	0.7	2.3	2	1	1	3	3	3	1	Glycosyl	transferase	family	2
Epimerase	PF01370.21	gi|84489882|ref|YP_448114.1|	-	2.7e-56	190.7	0.0	3.3e-56	190.4	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|84489882|ref|YP_448114.1|	-	2.2e-52	178.5	0.2	4.4e-52	177.5	0.2	1.5	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|84489882|ref|YP_448114.1|	-	8.4e-14	51.2	0.0	7.3e-11	41.6	0.0	2.0	2	0	0	2	2	2	2	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|84489882|ref|YP_448114.1|	-	1.2e-12	47.5	0.0	1.6e-12	47.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|84489882|ref|YP_448114.1|	-	5.4e-12	45.4	0.1	1.9e-10	40.4	0.1	2.8	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|84489882|ref|YP_448114.1|	-	1.2e-05	24.7	0.1	2.7e-05	23.5	0.0	1.6	2	1	0	2	2	2	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|84489882|ref|YP_448114.1|	-	1.7e-05	24.8	0.0	2.5e-05	24.3	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
KR	PF08659.10	gi|84489882|ref|YP_448114.1|	-	0.0009	19.2	0.2	0.012	15.6	0.2	2.2	1	1	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|84489882|ref|YP_448114.1|	-	0.0016	18.1	0.1	0.016	14.8	0.1	2.3	2	1	0	2	2	2	1	NmrA-like	family
SNase	PF00565.17	gi|84489883|ref|YP_448115.1|	-	2e-13	50.8	0.0	2.6e-13	50.4	0.0	1.1	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
Vel1p	PF10339.9	gi|84489883|ref|YP_448115.1|	-	0.056	12.8	0.0	0.059	12.7	0.0	1.1	1	0	0	1	1	1	0	Yeast-specific	zinc	responsive
PadR	PF03551.14	gi|84489884|ref|YP_448116.1|	-	0.015	15.3	1.4	4.3	7.4	0.0	2.8	1	1	3	4	4	4	0	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.6	gi|84489884|ref|YP_448116.1|	-	0.044	14.0	0.2	0.091	12.9	0.1	1.6	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Big_3_5	PF16640.5	gi|84489885|ref|YP_448117.1|	-	4.5e-09	36.4	31.9	2.9e-05	24.2	0.3	5.2	5	0	0	5	5	5	3	Bacterial	Ig-like	domain	(group	3)
Tricorn_PDZ	PF14685.6	gi|84489885|ref|YP_448117.1|	-	0.0065	16.4	1.8	0.68	9.9	0.1	3.7	3	0	0	3	3	3	1	Tricorn	protease	PDZ	domain
NurA	PF09376.10	gi|84489886|ref|YP_448118.1|	-	1.8e-45	155.6	3.3	2.5e-45	155.1	3.3	1.2	1	0	0	1	1	1	1	NurA	domain
Ank_2	PF12796.7	gi|84489886|ref|YP_448118.1|	-	0.1	13.2	0.0	0.24	12.0	0.0	1.6	1	0	0	1	1	1	0	Ankyrin	repeats	(3	copies)
DUF87	PF01935.17	gi|84489887|ref|YP_448119.1|	-	1.4e-49	169.3	3.4	1.4e-49	169.3	3.4	1.7	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
HAS-barrel	PF09378.10	gi|84489887|ref|YP_448119.1|	-	2.3e-11	43.7	2.8	2.9e-11	43.4	0.4	2.5	2	1	1	3	3	3	1	HAS	barrel	domain
DUF853	PF05872.12	gi|84489887|ref|YP_448119.1|	-	3.8e-09	35.7	0.0	2.2e-07	29.9	0.0	2.1	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|84489887|ref|YP_448119.1|	-	5.1e-05	22.4	0.0	0.00012	21.1	0.0	1.5	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_10	PF12846.7	gi|84489887|ref|YP_448119.1|	-	0.00034	19.6	0.1	0.78	8.6	0.0	2.6	2	1	0	2	2	2	2	AAA-like	domain
T4SS-DNA_transf	PF02534.14	gi|84489887|ref|YP_448119.1|	-	0.00045	19.2	0.0	0.0011	17.8	0.0	1.6	1	1	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
DEAD	PF00270.29	gi|84489887|ref|YP_448119.1|	-	0.0021	17.8	0.3	0.24	11.2	0.3	2.6	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
FtsK_SpoIIIE	PF01580.18	gi|84489887|ref|YP_448119.1|	-	0.0071	15.7	0.0	3.5	6.9	0.0	2.5	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
ABC_tran	PF00005.27	gi|84489887|ref|YP_448119.1|	-	0.075	13.6	0.2	0.23	12.0	0.0	2.0	2	0	0	2	2	2	0	ABC	transporter
Metallophos	PF00149.28	gi|84489888|ref|YP_448120.1|	-	1.6e-17	64.7	4.9	1.9e-17	64.5	3.4	1.9	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84489888|ref|YP_448120.1|	-	4.3e-12	46.5	0.0	9.8e-12	45.4	0.0	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF3836	PF12930.7	gi|84489888|ref|YP_448120.1|	-	0.021	14.6	1.2	0.95	9.2	0.1	2.5	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF3836)
SMC_N	PF02463.19	gi|84489889|ref|YP_448121.1|	-	2.2e-12	46.9	3.4	2.2e-12	46.9	3.4	3.6	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|84489889|ref|YP_448121.1|	-	6.2e-12	46.4	52.6	6.2e-12	46.4	52.6	6.7	1	1	2	3	3	1	1	AAA	domain
AAA_15	PF13175.6	gi|84489889|ref|YP_448121.1|	-	1.3e-09	38.3	50.9	1.3e-09	38.3	50.9	3.8	1	1	2	3	3	1	1	AAA	ATPase	domain
SbcCD_C	PF13558.6	gi|84489889|ref|YP_448121.1|	-	9.1e-07	29.0	0.0	2.9e-06	27.4	0.0	1.9	2	0	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.6	gi|84489889|ref|YP_448121.1|	-	1.5e-06	27.8	0.0	3e-06	26.9	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_27	PF13514.6	gi|84489889|ref|YP_448121.1|	-	2.6e-06	27.2	0.1	2.6e-06	27.2	0.1	3.0	4	0	0	4	4	4	1	AAA	domain
AAA_21	PF13304.6	gi|84489889|ref|YP_448121.1|	-	1.9e-05	24.6	32.9	0.00076	19.4	5.6	4.4	1	1	1	3	3	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
ABC_tran	PF00005.27	gi|84489889|ref|YP_448121.1|	-	0.00014	22.4	0.3	0.00014	22.4	0.3	6.2	1	1	1	3	3	2	2	ABC	transporter
Rad50_zn_hook	PF04423.14	gi|84489889|ref|YP_448121.1|	-	0.00022	21.0	2.2	0.00022	21.0	2.2	9.3	9	3	4	13	13	13	1	Rad50	zinc	hook	motif
AAA_16	PF13191.6	gi|84489889|ref|YP_448121.1|	-	0.018	15.4	0.0	0.054	13.9	0.0	1.9	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_5	PF07728.14	gi|84489889|ref|YP_448121.1|	-	0.13	12.3	2.5	2.3	8.2	1.0	3.1	1	1	1	2	2	2	0	AAA	domain	(dynein-related	subfamily)
VWA_2	PF13519.6	gi|84489889|ref|YP_448121.1|	-	0.23	12.1	1.2	8.2	7.1	0.1	3.4	2	1	0	2	2	2	0	von	Willebrand	factor	type	A	domain
Hydrolase	PF00702.26	gi|84489890|ref|YP_448122.1|	-	4.8e-17	62.9	1.8	4.8e-17	62.9	1.8	2.5	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|84489890|ref|YP_448122.1|	-	2.9e-16	60.4	0.1	8.2e-16	59.0	0.0	1.8	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|84489890|ref|YP_448122.1|	-	2.6e-11	43.8	0.6	2.6e-11	43.8	0.6	4.9	2	1	3	5	5	5	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|84489890|ref|YP_448122.1|	-	2.8e-07	30.8	4.6	2.8e-07	30.8	4.6	4.8	2	2	1	3	3	3	1	Haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|84489890|ref|YP_448122.1|	-	7e-05	22.3	0.3	7e-05	22.3	0.3	2.9	3	0	0	3	3	3	1	Putative	Phosphatase
TBP	PF00352.21	gi|84489891|ref|YP_448123.1|	-	5.2e-55	183.4	0.0	1.8e-27	95.1	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|84489891|ref|YP_448123.1|	-	1.2e-05	25.3	0.0	0.12	12.5	0.0	2.5	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF3378)
NdhS	PF11623.8	gi|84489891|ref|YP_448123.1|	-	0.049	13.3	0.0	7.7	6.3	0.0	2.3	2	0	0	2	2	2	0	NAD(P)H	dehydrogenase	subunit	S
DUF4061	PF13270.6	gi|84489891|ref|YP_448123.1|	-	0.12	12.7	0.0	1.9	8.8	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4061)
CYTH	PF01928.21	gi|84489892|ref|YP_448124.1|	-	1e-32	113.5	3.1	1.1e-32	113.4	3.1	1.0	1	0	0	1	1	1	1	CYTH	domain
UBA_3	PF09288.10	gi|84489892|ref|YP_448124.1|	-	0.03	14.1	0.8	12	5.8	0.1	3.0	1	1	2	3	3	3	0	Fungal	ubiquitin-associated	domain
Retrotran_gag_2	PF14223.6	gi|84489892|ref|YP_448124.1|	-	0.059	13.0	1.2	0.76	9.4	0.0	2.7	2	1	1	3	3	3	0	gag-polypeptide	of	LTR	copia-type
HMGL-like	PF00682.19	gi|84489893|ref|YP_448125.1|	-	5.4e-46	157.3	0.1	7.3e-46	156.9	0.1	1.2	1	0	0	1	1	1	1	HMGL-like
Aconitase	PF00330.20	gi|84489894|ref|YP_448126.1|	-	3.7e-91	306.4	5.1	4.9e-89	299.5	5.1	2.3	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|84489894|ref|YP_448126.1|	-	0.00083	18.2	0.0	0.0012	17.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
NTP_transferase	PF00483.23	gi|84489895|ref|YP_448127.1|	-	1.2e-26	93.8	0.0	1.7e-26	93.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|84489895|ref|YP_448127.1|	-	5.1e-10	39.9	0.0	1.2e-09	38.7	0.0	1.5	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|84489895|ref|YP_448127.1|	-	0.0044	16.8	0.0	0.018	14.8	0.0	1.9	2	0	0	2	2	2	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|84489895|ref|YP_448127.1|	-	0.067	13.1	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Cytidylyltransferase
Glyco_trans_1_2	PF13524.6	gi|84489895|ref|YP_448127.1|	-	0.076	13.4	0.0	0.15	12.5	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
NTP_transferase	PF00483.23	gi|84489896|ref|YP_448128.1|	-	2.1e-58	197.8	0.0	2.6e-58	197.6	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|84489896|ref|YP_448128.1|	-	2.7e-10	40.8	0.0	3.7e-10	40.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.24	gi|84489896|ref|YP_448128.1|	-	1.6e-07	30.8	15.8	4.3e-05	23.1	2.4	4.6	2	1	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.19	gi|84489896|ref|YP_448128.1|	-	0.1	12.3	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Big_3_5	PF16640.5	gi|84489897|ref|YP_448129.1|	-	1.9e-09	37.5	3.4	1.9e-09	37.5	3.4	5.2	6	0	0	6	6	6	2	Bacterial	Ig-like	domain	(group	3)
SlpA	PF03217.14	gi|84489897|ref|YP_448129.1|	-	0.059	14.0	0.2	0.059	14.0	0.2	7.8	7	1	0	7	7	7	0	Surface	later	protein	A	domain
Big_3_5	PF16640.5	gi|84489898|ref|YP_448130.1|	-	4.7e-31	106.8	65.6	1.5e-10	41.1	2.9	8.7	9	1	1	10	10	10	6	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|84489898|ref|YP_448130.1|	-	0.018	15.3	0.7	0.018	15.3	0.7	8.1	6	2	2	8	8	8	0	Invasin,	domain	3
MG2	PF01835.19	gi|84489898|ref|YP_448130.1|	-	0.076	13.5	1.0	8.3	6.9	0.0	4.2	4	0	0	4	4	4	0	MG2	domain
Big_1	PF02369.16	gi|84489898|ref|YP_448130.1|	-	0.19	11.7	34.5	0.14	12.1	0.7	6.6	7	0	0	7	7	7	0	Bacterial	Ig-like	domain	(group	1)
DUF2162	PF09930.9	gi|84489899|ref|YP_448131.1|	-	3.3e-63	213.1	32.3	3.8e-63	212.9	32.3	1.0	1	0	0	1	1	1	1	Predicted	transporter	(DUF2162)
DUF3180	PF11377.8	gi|84489899|ref|YP_448131.1|	-	7.1	6.8	15.7	3.1	8.0	0.8	3.2	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3180)
MotA_ExbB	PF01618.16	gi|84489900|ref|YP_448132.1|	-	3.5e-09	36.5	0.0	5.4e-09	35.9	0.0	1.3	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
Saf_2TM	PF18303.1	gi|84489900|ref|YP_448132.1|	-	0.028	14.0	0.2	0.081	12.5	0.4	1.6	2	0	0	2	2	2	0	SAVED-fused	2TM	effector	domain
DUF2149	PF09919.9	gi|84489901|ref|YP_448133.1|	-	7.3e-17	61.4	0.2	9.2e-17	61.1	0.2	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
ExbD	PF02472.16	gi|84489901|ref|YP_448133.1|	-	0.0078	16.4	0.1	0.0085	16.3	0.1	1.2	1	0	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
PepSY_TM	PF03929.16	gi|84489901|ref|YP_448133.1|	-	0.014	15.1	0.0	0.017	14.8	0.0	1.1	1	0	0	1	1	1	0	PepSY-associated	TM	region
Big_3_5	PF16640.5	gi|84489902|ref|YP_448134.1|	-	1.3e-61	204.8	125.8	5.1e-10	39.4	4.9	12.5	11	1	1	12	12	12	9	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|84489902|ref|YP_448134.1|	-	4.2e-23	81.9	146.6	1.6e-15	57.3	29.4	11.1	4	3	4	9	9	9	5	Right	handed	beta	helix	region
MG2	PF01835.19	gi|84489902|ref|YP_448134.1|	-	1.3e-11	44.8	7.0	0.48	10.9	0.0	6.6	6	0	0	6	6	6	4	MG2	domain
NosD	PF05048.13	gi|84489902|ref|YP_448134.1|	-	4.1e-09	36.1	59.6	2.6e-06	26.9	24.2	11.3	3	3	6	11	11	11	5	Periplasmic	copper-binding	protein	(NosD)
DUF4625	PF15418.6	gi|84489902|ref|YP_448134.1|	-	0.00066	19.9	18.4	1.4	9.2	0.0	7.9	7	2	0	7	7	7	2	Domain	of	unknown	function	(DUF4625)
TcfC	PF16967.5	gi|84489902|ref|YP_448134.1|	-	0.012	15.1	9.3	4.9	6.7	0.0	5.8	5	0	0	5	5	5	0	E-set	like	domain
AglB_L1	PF18079.1	gi|84489902|ref|YP_448134.1|	-	0.018	15.3	1.0	0.018	15.3	1.0	5.8	7	0	0	7	7	7	0	Archaeal	glycosylation	protein	B	long	peripheral	domain
PYC_OADA	PF02436.18	gi|84489902|ref|YP_448134.1|	-	0.99	9.1	6.9	8.2	6.1	0.1	2.9	3	0	0	3	3	3	0	Conserved	carboxylase	domain
Beta_helix	PF13229.6	gi|84489903|ref|YP_448135.1|	-	0.0003	20.7	21.5	0.0003	20.7	21.5	5.6	3	1	2	5	5	5	3	Right	handed	beta	helix	region
DUF1980	PF09323.10	gi|84489903|ref|YP_448135.1|	-	0.0062	16.5	3.3	0.015	15.2	1.1	2.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1980)
MG2	PF01835.19	gi|84489903|ref|YP_448135.1|	-	0.3	11.6	3.3	0.4	11.2	0.1	2.9	3	0	0	3	3	3	0	MG2	domain
CobN-Mg_chel	PF02514.16	gi|84489904|ref|YP_448136.1|	-	5.3e-178	594.0	23.5	5.3e-178	594.0	23.5	2.3	2	1	0	2	2	2	1	CobN/Magnesium	Chelatase
CarboxypepD_reg	PF13620.6	gi|84489904|ref|YP_448136.1|	-	1.8e-08	34.5	0.5	1.7e-07	31.4	0.5	2.8	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
CarbopepD_reg_2	PF13715.6	gi|84489904|ref|YP_448136.1|	-	8.6e-05	22.5	0.6	8.6e-05	22.5	0.6	3.2	2	0	0	2	2	2	1	CarboxypepD_reg-like	domain
SpaA	PF17802.1	gi|84489904|ref|YP_448136.1|	-	0.00069	19.9	1.0	0.00069	19.9	1.0	4.9	5	1	0	5	5	5	1	Prealbumin-like	fold	domain
DUF3139	PF11337.8	gi|84489904|ref|YP_448136.1|	-	0.13	12.9	5.8	0.085	13.5	0.6	3.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3139)
ECF-ribofla_trS	PF07155.12	gi|84489905|ref|YP_448137.1|	-	2.4e-08	34.2	25.4	2.4e-08	34.2	25.4	2.0	1	1	1	2	2	2	2	ECF-type	riboflavin	transporter,	S	component
ECF_trnsprt	PF12822.7	gi|84489905|ref|YP_448137.1|	-	1.8e-06	28.2	30.8	1.8e-06	28.2	30.8	2.3	2	1	0	2	2	2	1	ECF	transporter,	substrate-specific	component
DUF2206	PF09971.9	gi|84489905|ref|YP_448137.1|	-	5.3	5.7	16.0	0.16	10.7	9.2	1.8	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2206)
ABC_tran	PF00005.27	gi|84489906|ref|YP_448138.1|	-	1.9e-55	187.2	0.1	1e-26	94.1	0.0	2.3	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|84489906|ref|YP_448138.1|	-	1.9e-22	80.5	14.7	3.7e-10	40.1	0.1	4.3	2	2	1	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|84489906|ref|YP_448138.1|	-	1.7e-15	57.1	1.2	3.4e-08	33.2	0.0	2.4	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|84489906|ref|YP_448138.1|	-	7.3e-10	38.4	0.4	0.00037	20.2	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|84489906|ref|YP_448138.1|	-	8.2e-10	39.3	0.9	1.3e-05	25.7	0.0	3.4	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.6	gi|84489906|ref|YP_448138.1|	-	3.7e-08	33.5	15.8	0.018	14.8	0.0	3.4	2	2	1	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.6	gi|84489906|ref|YP_448138.1|	-	8.3e-08	32.6	1.7	0.00066	20.0	0.0	3.6	3	1	0	3	3	3	2	AAA	domain
AAA_23	PF13476.6	gi|84489906|ref|YP_448138.1|	-	8.8e-08	32.9	10.6	0.0014	19.1	0.1	2.6	3	0	0	3	3	2	2	AAA	domain
AAA_16	PF13191.6	gi|84489906|ref|YP_448138.1|	-	1.2e-07	32.2	0.0	0.00011	22.6	0.0	2.4	2	0	0	2	2	2	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|84489906|ref|YP_448138.1|	-	1.5e-07	31.5	3.0	7.6e-05	22.7	0.0	3.1	3	1	0	3	3	2	1	RsgA	GTPase
T2SSE	PF00437.20	gi|84489906|ref|YP_448138.1|	-	2e-07	30.4	0.1	0.0018	17.4	0.0	2.5	2	1	0	2	2	2	2	Type	II/IV	secretion	system	protein
NACHT	PF05729.12	gi|84489906|ref|YP_448138.1|	-	5.8e-07	29.6	0.0	0.021	14.7	0.0	3.3	3	0	0	3	3	3	2	NACHT	domain
AAA_30	PF13604.6	gi|84489906|ref|YP_448138.1|	-	3.7e-06	26.8	0.0	0.14	11.8	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_33	PF13671.6	gi|84489906|ref|YP_448138.1|	-	4.4e-06	26.9	0.2	0.0043	17.2	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
G-alpha	PF00503.20	gi|84489906|ref|YP_448138.1|	-	1.7e-05	24.1	2.2	0.033	13.4	0.0	2.6	2	1	0	2	2	2	2	G-protein	alpha	subunit
RNA_helicase	PF00910.22	gi|84489906|ref|YP_448138.1|	-	3.1e-05	24.3	0.5	0.2	12.0	0.0	3.3	4	0	0	4	4	2	2	RNA	helicase
KAP_NTPase	PF07693.14	gi|84489906|ref|YP_448138.1|	-	3.6e-05	23.1	0.1	0.18	11.0	0.0	2.2	2	0	0	2	2	2	2	KAP	family	P-loop	domain
Dynamin_N	PF00350.23	gi|84489906|ref|YP_448138.1|	-	4.7e-05	23.5	0.9	0.019	15.0	0.2	2.8	3	0	0	3	3	2	1	Dynamin	family
ATPase_2	PF01637.18	gi|84489906|ref|YP_448138.1|	-	4.8e-05	23.4	5.6	0.0062	16.5	0.0	2.8	3	0	0	3	3	2	2	ATPase	domain	predominantly	from	Archaea
AAA_28	PF13521.6	gi|84489906|ref|YP_448138.1|	-	4.9e-05	23.6	0.0	0.39	10.9	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.6	gi|84489906|ref|YP_448138.1|	-	6.7e-05	23.3	0.1	0.026	14.9	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|84489906|ref|YP_448138.1|	-	6.7e-05	22.7	0.3	0.59	9.9	0.0	4.0	4	0	0	4	4	4	1	IstB-like	ATP	binding	protein
NTPase_1	PF03266.15	gi|84489906|ref|YP_448138.1|	-	6.8e-05	22.8	0.9	0.054	13.4	0.0	3.3	3	0	0	3	3	3	1	NTPase
Rad17	PF03215.15	gi|84489906|ref|YP_448138.1|	-	0.00011	22.2	1.9	0.019	14.9	0.0	3.4	2	1	0	3	3	3	1	Rad17	P-loop	domain
AAA_19	PF13245.6	gi|84489906|ref|YP_448138.1|	-	0.00012	22.5	0.6	0.39	11.0	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|84489906|ref|YP_448138.1|	-	0.00018	21.9	0.3	0.068	13.6	0.0	3.5	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.6	gi|84489906|ref|YP_448138.1|	-	0.00031	20.4	0.0	0.041	13.4	0.0	2.8	3	0	0	3	3	3	1	AAA	domain
AAA_24	PF13479.6	gi|84489906|ref|YP_448138.1|	-	0.00032	20.5	1.7	0.37	10.5	0.1	2.9	3	0	0	3	3	2	2	AAA	domain
AAA_7	PF12775.7	gi|84489906|ref|YP_448138.1|	-	0.00035	20.2	0.1	0.018	14.6	0.0	2.7	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
MobB	PF03205.14	gi|84489906|ref|YP_448138.1|	-	0.00042	20.2	0.1	0.17	11.8	0.0	2.8	3	0	0	3	3	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.22	gi|84489906|ref|YP_448138.1|	-	0.00044	19.5	2.1	0.0079	15.4	0.0	3.0	2	2	0	2	2	2	1	NB-ARC	domain
FtsK_SpoIIIE	PF01580.18	gi|84489906|ref|YP_448138.1|	-	0.00046	19.6	0.3	0.79	9.0	0.2	2.4	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_14	PF13173.6	gi|84489906|ref|YP_448138.1|	-	0.00047	20.2	1.7	0.15	12.1	0.0	3.5	3	1	1	4	4	3	1	AAA	domain
SbcCD_C	PF13558.6	gi|84489906|ref|YP_448138.1|	-	0.00059	20.0	0.0	6.6	7.0	0.0	4.1	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Pox_A32	PF04665.12	gi|84489906|ref|YP_448138.1|	-	0.0006	19.3	0.9	0.58	9.6	0.0	3.0	3	0	0	3	3	3	1	Poxvirus	A32	protein
Zeta_toxin	PF06414.12	gi|84489906|ref|YP_448138.1|	-	0.00094	18.5	0.1	0.037	13.3	0.0	2.3	2	0	0	2	2	2	1	Zeta	toxin
AAA_5	PF07728.14	gi|84489906|ref|YP_448138.1|	-	0.0012	18.8	0.2	0.45	10.5	0.0	2.8	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
PRK	PF00485.18	gi|84489906|ref|YP_448138.1|	-	0.0019	18.0	0.0	0.89	9.3	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
TsaE	PF02367.17	gi|84489906|ref|YP_448138.1|	-	0.0019	18.2	0.3	0.18	11.8	0.0	2.4	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
TniB	PF05621.11	gi|84489906|ref|YP_448138.1|	-	0.0021	17.5	1.5	0.67	9.3	0.1	3.1	4	0	0	4	4	3	1	Bacterial	TniB	protein
ATP_bind_1	PF03029.17	gi|84489906|ref|YP_448138.1|	-	0.0029	17.4	0.5	3.2	7.5	0.2	2.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
ABC_ATPase	PF09818.9	gi|84489906|ref|YP_448138.1|	-	0.003	16.4	0.6	9.4	4.9	0.8	3.8	3	1	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
Mg_chelatase	PF01078.21	gi|84489906|ref|YP_448138.1|	-	0.0032	16.9	0.0	1.4	8.3	0.0	2.6	3	0	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.23	gi|84489906|ref|YP_448138.1|	-	0.0035	17.4	2.9	1.8	8.7	0.0	3.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
PIF1	PF05970.14	gi|84489906|ref|YP_448138.1|	-	0.0047	16.1	1.1	0.078	12.1	0.0	2.7	2	0	0	2	2	2	1	PIF1-like	helicase
cobW	PF02492.19	gi|84489906|ref|YP_448138.1|	-	0.0051	16.4	3.6	0.041	13.5	0.0	3.1	3	0	0	3	3	3	1	CobW/HypB/UreG,	nucleotide-binding	domain
PduV-EutP	PF10662.9	gi|84489906|ref|YP_448138.1|	-	0.0053	16.5	0.3	0.83	9.4	0.0	2.6	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_PrkA	PF08298.11	gi|84489906|ref|YP_448138.1|	-	0.007	15.3	0.0	2.7	6.8	0.0	2.5	2	0	0	2	2	2	1	PrkA	AAA	domain
Thymidylate_kin	PF02223.17	gi|84489906|ref|YP_448138.1|	-	0.013	15.2	1.0	3.3	7.3	0.1	3.2	3	0	0	3	3	3	0	Thymidylate	kinase
SRP54	PF00448.22	gi|84489906|ref|YP_448138.1|	-	0.022	14.4	2.9	1.1	8.8	0.1	3.1	2	1	1	3	3	3	0	SRP54-type	protein,	GTPase	domain
Roc	PF08477.13	gi|84489906|ref|YP_448138.1|	-	0.024	14.8	0.1	1.3	9.2	0.0	2.7	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ATPase	PF06745.13	gi|84489906|ref|YP_448138.1|	-	0.029	13.7	0.4	3.9	6.7	0.0	2.7	3	0	0	3	3	2	0	KaiC
DUF815	PF05673.13	gi|84489906|ref|YP_448138.1|	-	0.03	13.5	0.1	20	4.2	0.0	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF815)
Cytidylate_kin	PF02224.18	gi|84489906|ref|YP_448138.1|	-	0.032	14.0	0.0	12	5.6	0.0	2.8	2	1	0	2	2	2	0	Cytidylate	kinase
APS_kinase	PF01583.20	gi|84489906|ref|YP_448138.1|	-	0.051	13.5	0.1	0.23	11.3	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_11	PF13086.6	gi|84489906|ref|YP_448138.1|	-	0.058	13.2	0.1	0.43	10.3	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
SRPRB	PF09439.10	gi|84489906|ref|YP_448138.1|	-	0.061	12.7	0.4	0.6	9.5	0.0	2.4	2	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Ploopntkinase3	PF18751.1	gi|84489906|ref|YP_448138.1|	-	0.071	13.0	0.0	5.7	6.8	0.0	2.2	2	0	0	2	2	2	0	P-loop	Nucleotide	Kinase3
AAA_27	PF13514.6	gi|84489906|ref|YP_448138.1|	-	0.072	12.7	0.2	8.9	5.8	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
RuvB_N	PF05496.12	gi|84489906|ref|YP_448138.1|	-	0.072	12.8	0.1	0.35	10.6	0.0	2.1	2	0	0	2	2	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
TrwB_AAD_bind	PF10412.9	gi|84489906|ref|YP_448138.1|	-	0.077	11.9	0.6	9.9	5.0	0.0	2.5	3	0	0	3	3	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
CbiQ	PF02361.16	gi|84489907|ref|YP_448139.1|	-	4e-09	36.4	11.2	4e-09	36.4	11.2	2.2	2	0	0	2	2	2	1	Cobalt	transport	protein
Kelch_6	PF13964.6	gi|84489907|ref|YP_448139.1|	-	0.21	11.9	2.6	7.7	7.0	0.1	2.5	2	0	0	2	2	2	0	Kelch	motif
PIRT	PF15099.6	gi|84489907|ref|YP_448139.1|	-	0.92	9.1	4.5	1.9	8.1	0.2	2.5	2	0	0	2	2	2	0	Phosphoinositide-interacting	protein	family
GDP_Man_Dehyd	PF16363.5	gi|84489908|ref|YP_448140.1|	-	7.3e-78	262.3	0.0	8.4e-78	262.1	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|84489908|ref|YP_448140.1|	-	3.1e-61	206.9	0.0	3.9e-61	206.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|84489908|ref|YP_448140.1|	-	1.7e-20	73.2	0.1	2.3e-20	72.7	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|84489908|ref|YP_448140.1|	-	1.5e-17	63.6	0.0	2.2e-17	63.1	0.0	1.3	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|84489908|ref|YP_448140.1|	-	1.1e-16	60.8	0.0	5.4e-16	58.6	0.0	1.8	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|84489908|ref|YP_448140.1|	-	1.6e-11	43.9	0.0	3.4e-08	33.0	0.0	2.6	2	1	0	2	2	2	2	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|84489908|ref|YP_448140.1|	-	3.3e-08	33.7	0.0	5.6e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	NAD(P)H-binding
Sacchrp_dh_NADP	PF03435.18	gi|84489908|ref|YP_448140.1|	-	1.5e-06	28.5	0.0	1e-05	25.8	0.0	2.0	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
Ldh_1_N	PF00056.23	gi|84489908|ref|YP_448140.1|	-	5.3e-05	23.3	0.2	9e-05	22.6	0.2	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
adh_short	PF00106.25	gi|84489908|ref|YP_448140.1|	-	0.012	15.1	0.1	1	8.8	0.0	2.2	2	0	0	2	2	2	0	short	chain	dehydrogenase
NmrA	PF05368.13	gi|84489908|ref|YP_448140.1|	-	0.014	15.0	0.0	0.022	14.3	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
DapB_N	PF01113.20	gi|84489908|ref|YP_448140.1|	-	0.036	14.2	0.1	0.065	13.4	0.1	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
KR	PF08659.10	gi|84489908|ref|YP_448140.1|	-	0.067	13.1	0.1	0.31	11.0	0.1	2.1	1	1	0	1	1	1	0	KR	domain
Tricorn_PDZ	PF14685.6	gi|84489909|ref|YP_448141.1|	-	2	8.4	5.9	5.4	7.0	0.1	3.8	4	0	0	4	4	4	0	Tricorn	protease	PDZ	domain
RmlD_sub_bind	PF04321.17	gi|84489910|ref|YP_448142.1|	-	7.7e-79	264.8	0.0	9.3e-79	264.5	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.21	gi|84489910|ref|YP_448142.1|	-	7.1e-23	81.3	0.1	9.2e-23	80.9	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|84489910|ref|YP_448142.1|	-	2.9e-16	59.8	2.5	6.1e-16	58.7	2.5	1.6	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|84489910|ref|YP_448142.1|	-	1.6e-11	43.9	4.5	8.1e-11	41.6	4.5	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|84489910|ref|YP_448142.1|	-	7.3e-10	38.4	2.3	3.7e-09	36.1	0.1	2.5	1	1	0	2	2	2	1	Male	sterility	protein
3Beta_HSD	PF01073.19	gi|84489910|ref|YP_448142.1|	-	1.3e-09	37.4	8.5	9.3e-09	34.7	8.5	2.3	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.6	gi|84489910|ref|YP_448142.1|	-	1.5e-05	25.0	0.0	2.2e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short_C2	PF13561.6	gi|84489910|ref|YP_448142.1|	-	0.00049	19.7	0.3	0.00073	19.2	0.3	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|84489910|ref|YP_448142.1|	-	0.031	13.7	1.0	0.07	12.6	1.0	1.5	1	1	0	1	1	1	0	short	chain	dehydrogenase
KR	PF08659.10	gi|84489910|ref|YP_448142.1|	-	0.14	12.1	3.4	3.7	7.4	2.5	2.9	2	1	0	2	2	2	0	KR	domain
DUF371	PF04027.13	gi|84489911|ref|YP_448143.1|	-	8.2e-52	174.7	3.0	9e-52	174.6	3.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
DUF123	PF01986.16	gi|84489912|ref|YP_448144.1|	-	1e-30	106.1	0.4	1.3e-30	105.7	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.24	gi|84489912|ref|YP_448144.1|	-	0.00047	20.4	1.7	0.00092	19.4	1.7	1.5	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
Fer4_NifH	PF00142.18	gi|84489913|ref|YP_448145.1|	-	1.5e-95	319.7	1.7	1.7e-95	319.6	1.7	1.0	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CbiA	PF01656.23	gi|84489913|ref|YP_448145.1|	-	1.3e-06	28.5	0.0	2e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|84489913|ref|YP_448145.1|	-	1.9e-06	27.6	0.6	0.001	18.6	0.0	2.3	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
AAA_31	PF13614.6	gi|84489913|ref|YP_448145.1|	-	7e-06	26.1	0.1	0.00031	20.7	0.1	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|84489913|ref|YP_448145.1|	-	1.9e-05	24.5	0.1	3e-05	23.9	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|84489913|ref|YP_448145.1|	-	0.0061	15.8	0.7	0.064	12.4	0.2	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_22	PF13401.6	gi|84489913|ref|YP_448145.1|	-	0.0085	16.4	0.0	0.03	14.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|84489913|ref|YP_448145.1|	-	0.024	15.0	0.3	0.18	12.2	0.0	2.3	2	1	0	2	2	2	0	RNA	helicase
AAA_5	PF07728.14	gi|84489913|ref|YP_448145.1|	-	0.027	14.5	0.0	0.15	12.1	0.0	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.27	gi|84489913|ref|YP_448145.1|	-	0.054	14.0	0.0	0.11	13.0	0.0	1.6	2	0	0	2	2	2	0	ABC	transporter
DUF87	PF01935.17	gi|84489913|ref|YP_448145.1|	-	0.1	12.7	0.5	0.22	11.6	0.2	1.7	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
AAA_16	PF13191.6	gi|84489913|ref|YP_448145.1|	-	0.22	11.9	0.0	0.33	11.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Peptidase_U32	PF01136.19	gi|84489914|ref|YP_448146.1|	-	4.4e-85	284.5	0.0	6.5e-85	284.0	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	U32
Spc24	PF08286.11	gi|84489914|ref|YP_448146.1|	-	0.046	14.0	1.0	0.21	11.8	0.0	2.3	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Cys_box	PF17869.1	gi|84489914|ref|YP_448146.1|	-	0.059	13.5	1.0	0.12	12.5	0.2	1.9	2	0	0	2	2	2	0	Anosmin	cysteine	rich	domain
Frataxin_Cyay	PF01491.16	gi|84489914|ref|YP_448146.1|	-	0.1	12.7	0.1	0.33	11.1	0.1	1.8	1	1	0	1	1	1	0	Frataxin-like	domain
Glyco_hydro_97	PF10566.9	gi|84489914|ref|YP_448146.1|	-	0.74	9.0	5.0	0.2	10.9	1.4	1.7	2	0	0	2	2	2	0	Glycoside	hydrolase	97
GATase_6	PF13522.6	gi|84489915|ref|YP_448147.1|	-	1.1e-19	71.0	0.0	2.2e-19	70.0	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|84489915|ref|YP_448147.1|	-	1.6e-19	70.0	0.0	2.6e-19	69.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.27	gi|84489915|ref|YP_448147.1|	-	1.6e-09	37.5	1.0	1.6e-08	34.3	0.5	2.1	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
GATase_4	PF13230.6	gi|84489915|ref|YP_448147.1|	-	1.6e-06	27.3	0.0	2.9e-06	26.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
UPRTase	PF14681.6	gi|84489915|ref|YP_448147.1|	-	0.055	12.9	0.1	0.1	12.0	0.1	1.4	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
UDPG_MGDP_dh_N	PF03721.14	gi|84489915|ref|YP_448147.1|	-	0.058	13.0	0.0	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FMN_red	PF03358.15	gi|84489916|ref|YP_448148.1|	-	6.1e-26	91.0	0.0	8.4e-26	90.6	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84489916|ref|YP_448148.1|	-	5.9e-16	58.8	0.0	7.2e-16	58.5	0.0	1.0	1	0	0	1	1	1	1	Flavodoxin-like	fold
mRNA_cap_enzyme	PF01331.19	gi|84489916|ref|YP_448148.1|	-	0.0065	16.3	0.0	0.01	15.7	0.0	1.3	1	0	0	1	1	1	1	mRNA	capping	enzyme,	catalytic	domain
DUF89	PF01937.19	gi|84489917|ref|YP_448149.1|	-	5.6e-54	183.4	4.3	6.2e-54	183.3	4.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
DUF1995	PF09353.10	gi|84489917|ref|YP_448149.1|	-	0.053	13.5	0.1	0.11	12.5	0.1	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1995)
ThiD2	PF17792.1	gi|84489917|ref|YP_448149.1|	-	0.13	12.8	0.3	0.39	11.2	0.2	1.9	1	1	1	2	2	2	0	ThiD2	family
TrmB	PF01978.19	gi|84489918|ref|YP_448150.1|	-	9.9e-22	76.6	1.5	2.2e-21	75.5	1.5	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|84489918|ref|YP_448150.1|	-	0.0012	18.6	0.0	0.0023	17.7	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_34	PF13601.6	gi|84489918|ref|YP_448150.1|	-	0.0014	18.7	0.1	0.0028	17.8	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_46	PF15977.5	gi|84489918|ref|YP_448150.1|	-	0.0039	17.2	0.3	0.012	15.6	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA	binding
Penicillinase_R	PF03965.16	gi|84489918|ref|YP_448150.1|	-	0.028	14.8	0.1	0.061	13.7	0.1	1.6	1	0	0	1	1	1	0	Penicillinase	repressor
PadR	PF03551.14	gi|84489918|ref|YP_448150.1|	-	0.037	14.0	0.0	0.069	13.1	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_24	PF13412.6	gi|84489918|ref|YP_448150.1|	-	0.046	13.3	0.2	0.15	11.6	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.6	gi|84489918|ref|YP_448150.1|	-	0.094	12.7	0.1	0.31	11.0	0.1	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain
RPA_C	PF08784.11	gi|84489918|ref|YP_448150.1|	-	0.13	12.9	0.2	39	5.0	0.0	2.6	3	0	0	3	3	3	0	Replication	protein	A	C	terminal
Ribosomal_S8	PF00410.19	gi|84489918|ref|YP_448150.1|	-	0.59	10.1	3.8	0.44	10.5	1.6	1.8	1	1	1	2	2	2	0	Ribosomal	protein	S8
Prismane	PF03063.20	gi|162316921|ref|YP_448151.2|	-	2e-117	393.0	0.4	7.7e-100	335.0	0.0	2.0	1	1	1	2	2	2	2	Prismane/CO	dehydrogenase	family
Radical_SAM	PF04055.21	gi|84489920|ref|YP_448152.1|	-	0.032	14.6	1.0	0.25	11.7	0.6	2.6	1	1	1	2	2	2	0	Radical	SAM	superfamily
Bac_luciferase	PF00296.20	gi|84489921|ref|YP_448153.1|	-	2e-58	198.3	0.0	2.4e-58	198.1	0.0	1.0	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
PHP	PF02811.19	gi|84489921|ref|YP_448153.1|	-	0.086	13.1	0.0	0.12	12.6	0.0	1.3	1	1	0	1	1	1	0	PHP	domain
PMBR	PF09373.10	gi|84489922|ref|YP_448154.1|	-	4e-24	83.6	34.1	5.9e-06	26.2	0.5	8.1	7	0	0	7	7	7	5	Pseudomurein-binding	repeat
Transglut_core	PF01841.19	gi|84489922|ref|YP_448154.1|	-	9.5e-21	74.4	1.4	2.7e-20	72.9	1.4	1.9	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Big_3_5	PF16640.5	gi|84489922|ref|YP_448154.1|	-	3e-18	65.8	37.4	2.8e-10	40.2	9.0	6.0	6	1	0	6	6	6	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|84489922|ref|YP_448154.1|	-	0.00018	21.5	13.7	0.0012	18.8	2.5	6.9	6	3	1	7	7	7	4	Bacterial	Ig-like	domain	(group	1)
Peptidase_C71	PF12386.8	gi|84489922|ref|YP_448154.1|	-	0.0016	18.1	3.2	0.0016	18.1	3.2	2.7	3	0	0	3	3	3	1	Pseudomurein	endo-isopeptidase	Pei
Invasin_D3	PF09134.10	gi|84489922|ref|YP_448154.1|	-	0.051	13.9	69.0	0.018	15.3	7.5	6.3	4	2	2	6	6	6	0	Invasin,	domain	3
TFIID-31kDa	PF02291.15	gi|84489922|ref|YP_448154.1|	-	0.33	11.0	3.6	0.37	10.9	0.2	2.5	2	0	0	2	2	2	0	Transcription	initiation	factor	IID,	31kD	subunit
DUF2207	PF09972.9	gi|84489923|ref|YP_448155.1|	-	0.014	14.2	0.3	0.014	14.2	0.3	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
ATP-grasp_3	PF02655.14	gi|84489924|ref|YP_448156.1|	-	2.5e-29	102.4	0.1	3.4e-29	102.0	0.1	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|84489924|ref|YP_448156.1|	-	5.6e-08	32.4	0.0	0.0063	15.8	0.0	2.3	2	0	0	2	2	2	2	Sugar-transfer	associated	ATP-grasp
ATPgrasp_YheCD	PF14398.6	gi|84489924|ref|YP_448156.1|	-	1.2e-06	28.0	0.1	0.0019	17.5	0.0	2.2	2	0	0	2	2	2	2	YheC/D	like	ATP-grasp
CPSase_L_D2	PF02786.17	gi|84489924|ref|YP_448156.1|	-	4.5e-06	26.3	0.1	1.9e-05	24.2	0.0	2.0	2	1	1	3	3	3	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
RimK	PF08443.11	gi|84489924|ref|YP_448156.1|	-	4.1e-05	23.3	0.1	0.00015	21.4	0.1	1.8	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|84489924|ref|YP_448156.1|	-	7.8e-05	22.4	0.0	0.00014	21.6	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Dala_Dala_lig_C	PF07478.13	gi|84489924|ref|YP_448156.1|	-	0.0037	16.8	0.2	0.02	14.5	0.0	2.0	2	0	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
PSP94	PF05825.11	gi|84489924|ref|YP_448156.1|	-	0.11	13.1	0.1	0.22	12.1	0.1	1.5	1	0	0	1	1	1	0	Beta-microseminoprotein	(PSP-94)
ATP-synt_D	PF01813.17	gi|84489925|ref|YP_448157.1|	-	9.1e-59	198.6	9.2	1e-58	198.4	9.2	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF3187	PF11383.8	gi|84489925|ref|YP_448157.1|	-	0.11	11.7	0.0	0.13	11.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3187)
Phage_mat-A	PF03863.13	gi|84489925|ref|YP_448157.1|	-	0.12	11.3	0.0	0.15	10.9	0.0	1.1	1	0	0	1	1	1	0	Phage	maturation	protein
ATP-synt_ab	PF00006.25	gi|84489926|ref|YP_448158.1|	-	2.1e-67	226.9	0.0	2.9e-67	226.4	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|84489926|ref|YP_448158.1|	-	5.8e-13	49.2	3.3	1.2e-12	48.1	3.3	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|84489926|ref|YP_448158.1|	-	0.0037	17.4	2.0	0.0066	16.6	1.0	1.9	2	0	0	2	2	2	1	HAS	barrel	domain
ATP-synt_ab	PF00006.25	gi|84489927|ref|YP_448159.1|	-	1.6e-89	299.2	0.0	2.8e-89	298.4	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|84489927|ref|YP_448159.1|	-	3.4e-48	162.5	0.3	6.3e-48	161.6	0.3	1.5	1	0	0	1	1	1	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|84489927|ref|YP_448159.1|	-	3.8e-12	46.6	3.5	9.3e-12	45.3	3.5	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
RnfC_N	PF13375.6	gi|84489927|ref|YP_448159.1|	-	0.02	14.8	0.9	0.075	13.0	0.1	2.2	2	0	0	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
AAA_22	PF13401.6	gi|84489927|ref|YP_448159.1|	-	0.11	12.8	0.0	0.24	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Myosin_N	PF02736.19	gi|84489927|ref|YP_448159.1|	-	2	8.4	3.9	1.6	8.7	0.3	2.6	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
ATP-synt_F	PF01990.17	gi|84489928|ref|YP_448160.1|	-	4.5e-22	78.2	0.2	5.4e-22	77.9	0.2	1.1	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
vATP-synt_AC39	PF01992.16	gi|84489929|ref|YP_448161.1|	-	7.7e-75	252.5	7.1	8.8e-75	252.3	7.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
SUB1_ProdP9	PF18213.1	gi|84489929|ref|YP_448161.1|	-	0.16	11.8	2.2	0.53	10.2	0.6	2.5	2	0	0	2	2	2	0	SUB1	protease	Prodomain	ProdP9
vATP-synt_E	PF01991.18	gi|84489930|ref|YP_448162.1|	-	3.2e-43	147.5	21.4	3.6e-43	147.3	21.4	1.0	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
FliH	PF02108.16	gi|84489930|ref|YP_448162.1|	-	0.1	12.7	6.2	0.019	15.1	2.4	1.8	2	1	0	2	2	2	0	Flagellar	assembly	protein	FliH
ATP-synt_B	PF00430.18	gi|84489930|ref|YP_448162.1|	-	0.13	12.3	24.5	0.046	13.8	11.0	2.4	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
Atg14	PF10186.9	gi|84489930|ref|YP_448162.1|	-	0.31	10.1	9.3	0.4	9.7	9.3	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Macoilin	PF09726.9	gi|84489930|ref|YP_448162.1|	-	2	6.9	12.0	3.4	6.1	12.0	1.4	1	0	0	1	1	1	0	Macoilin	family
ATP-synt_C	PF00137.21	gi|84489931|ref|YP_448163.1|	-	2e-32	111.3	39.3	3.1e-17	62.6	12.3	2.9	3	0	0	3	3	3	2	ATP	synthase	subunit	C
KRTAP	PF11759.8	gi|84489931|ref|YP_448163.1|	-	0.31	11.6	11.2	1.6	9.3	4.8	2.3	2	0	0	2	2	2	0	Keratin-associated	matrix
TcpE	PF12648.7	gi|84489931|ref|YP_448163.1|	-	2.1	8.9	5.5	13	6.4	0.4	2.2	2	0	0	2	2	2	0	TcpE	family
V_ATPase_I	PF01496.19	gi|84489932|ref|YP_448164.1|	-	2e-21	75.7	17.8	7e-15	54.1	0.9	3.7	3	1	0	3	3	3	3	V-type	ATPase	116kDa	subunit	family
TFIIS_M	PF07500.14	gi|84489932|ref|YP_448164.1|	-	0.065	13.7	0.3	0.34	11.4	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS),	central	domain
V-ATPase_G	PF03179.15	gi|84489933|ref|YP_448165.1|	-	2.3e-05	24.9	10.4	2.7e-05	24.7	10.4	1.0	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
DUF883	PF05957.13	gi|84489933|ref|YP_448165.1|	-	0.0072	16.9	5.5	0.011	16.3	5.5	1.5	1	1	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF883)
DivIVA	PF05103.13	gi|84489933|ref|YP_448165.1|	-	0.015	15.3	13.9	0.068	13.3	8.3	2.5	1	1	1	2	2	2	0	DivIVA	protein
V-ATPase_G_2	PF16999.5	gi|84489933|ref|YP_448165.1|	-	0.016	15.6	15.1	0.29	11.6	15.1	2.2	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
Peptidase_M41	PF01434.18	gi|84489933|ref|YP_448165.1|	-	0.02	14.8	3.9	0.026	14.4	3.8	1.2	1	1	0	1	1	1	0	Peptidase	family	M41
ATP-synt_B	PF00430.18	gi|84489933|ref|YP_448165.1|	-	0.041	14.0	15.3	0.042	13.9	13.5	1.8	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
UBA	PF00627.31	gi|84489933|ref|YP_448165.1|	-	0.073	13.0	0.0	0.18	11.7	0.0	1.7	1	0	0	1	1	1	0	UBA/TS-N	domain
vATP-synt_E	PF01991.18	gi|84489933|ref|YP_448165.1|	-	0.44	9.9	16.1	1.9	7.8	4.7	2.0	1	1	1	2	2	2	0	ATP	synthase	(E/31	kDa)	subunit
3HCDH_N	PF02737.18	gi|84489933|ref|YP_448165.1|	-	0.45	10.4	7.6	0.27	11.1	6.0	1.5	1	1	1	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF1743	PF08489.11	gi|84489934|ref|YP_448166.1|	-	2.4e-41	140.4	0.0	3.8e-41	139.8	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.25	gi|84489934|ref|YP_448166.1|	-	0.00016	21.6	0.1	0.00061	19.7	0.0	1.9	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.6	gi|84489934|ref|YP_448166.1|	-	0.15	12.2	0.0	0.37	11.0	0.0	1.6	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|84489934|ref|YP_448166.1|	-	1.2	9.2	3.8	0.52	10.3	0.5	2.0	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF2769	PF10967.8	gi|84489934|ref|YP_448166.1|	-	4	8.2	9.5	17	6.1	2.2	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2769)
HTH_3	PF01381.22	gi|84489935|ref|YP_448167.1|	-	7.5e-11	41.9	0.1	2.5e-10	40.2	0.1	2.0	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|84489935|ref|YP_448167.1|	-	8.3e-08	32.1	0.3	8.3e-08	32.1	0.3	3.1	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|84489935|ref|YP_448167.1|	-	5.9e-06	26.5	0.0	1.7e-05	25.1	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|84489935|ref|YP_448167.1|	-	0.00034	20.4	0.3	0.0012	18.6	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|84489935|ref|YP_448167.1|	-	0.00089	19.2	0.1	0.00089	19.2	0.1	3.1	4	0	0	4	4	4	1	HTH	domain
HTH_7	PF02796.15	gi|84489935|ref|YP_448167.1|	-	0.0041	17.2	0.4	0.017	15.2	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|84489935|ref|YP_448167.1|	-	0.033	14.0	0.0	0.095	12.5	0.0	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_26	PF13443.6	gi|84489935|ref|YP_448167.1|	-	0.063	13.7	0.2	0.21	12.0	0.1	2.1	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
Dimer_Tnp_hAT	PF05699.14	gi|84489935|ref|YP_448167.1|	-	0.064	13.0	0.0	0.2	11.5	0.0	1.8	1	0	0	1	1	1	0	hAT	family	C-terminal	dimerisation	region
MarR	PF01047.22	gi|84489935|ref|YP_448167.1|	-	0.11	12.5	1.4	0.42	10.6	0.0	2.6	3	0	0	3	3	3	0	MarR	family
MqsA_antitoxin	PF15731.5	gi|84489935|ref|YP_448167.1|	-	0.11	12.6	0.3	0.65	10.1	0.0	2.2	2	0	0	2	2	2	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
MCPsignal	PF00015.21	gi|84489935|ref|YP_448167.1|	-	0.13	12.0	1.3	0.42	10.4	1.3	1.8	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF2408	PF10303.9	gi|84489935|ref|YP_448167.1|	-	3.9	8.0	11.5	3.9	8.0	6.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2408)
2-Hacid_dh_C	PF02826.19	gi|84489937|ref|YP_448169.1|	-	1.6e-63	213.3	0.0	2.8e-63	212.5	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|84489937|ref|YP_448169.1|	-	4.2e-38	130.0	1.6	4.2e-38	130.0	1.6	2.4	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
ACT	PF01842.25	gi|84489937|ref|YP_448169.1|	-	5.5e-11	42.0	0.7	2.2e-10	40.1	0.0	2.3	2	0	0	2	2	2	1	ACT	domain
NAD_binding_2	PF03446.15	gi|84489937|ref|YP_448169.1|	-	7.2e-06	26.3	2.3	4.8e-05	23.6	0.0	2.9	3	1	0	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|84489937|ref|YP_448169.1|	-	0.002	17.7	0.0	0.0062	16.1	0.0	1.9	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
NAD_binding_7	PF13241.6	gi|84489937|ref|YP_448169.1|	-	0.0037	17.7	0.3	0.03	14.8	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
F420_oxidored	PF03807.17	gi|84489937|ref|YP_448169.1|	-	0.012	16.2	5.0	0.085	13.5	0.0	4.0	5	0	0	5	5	5	0	NADP	oxidoreductase	coenzyme	F420-dependent
HIM1	PF08732.10	gi|84489937|ref|YP_448169.1|	-	0.045	13.3	0.2	0.099	12.2	0.2	1.5	1	0	0	1	1	1	0	HIM1
UDPG_MGDP_dh_C	PF03720.15	gi|84489937|ref|YP_448169.1|	-	0.43	11.0	3.4	0.71	10.3	0.1	3.0	4	1	0	4	4	4	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Prok-JAB	PF14464.6	gi|84489938|ref|YP_448170.1|	-	5.1e-11	42.4	0.0	8.3e-11	41.7	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
APG6_N	PF17675.1	gi|84489938|ref|YP_448170.1|	-	0.00016	22.2	6.1	0.075	13.6	0.6	2.2	2	0	0	2	2	2	2	Apg6	coiled-coil	region
JAB	PF01398.21	gi|84489938|ref|YP_448170.1|	-	0.00018	21.5	0.2	0.019	14.9	0.0	2.8	2	1	0	2	2	2	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
GIT_CC	PF16559.5	gi|84489938|ref|YP_448170.1|	-	0.0017	18.2	5.4	0.0029	17.5	0.3	2.5	2	0	0	2	2	2	1	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
FliD_C	PF07195.12	gi|84489938|ref|YP_448170.1|	-	0.0033	16.9	0.0	0.0091	15.4	0.0	1.7	2	1	0	2	2	2	1	Flagellar	hook-associated	protein	2	C-terminus
UPF0242	PF06785.11	gi|84489938|ref|YP_448170.1|	-	0.08	13.0	8.2	0.098	12.8	1.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
PRKG1_interact	PF15898.5	gi|84489938|ref|YP_448170.1|	-	0.16	12.9	6.4	2.6	9.0	0.7	2.4	2	0	0	2	2	2	0	cGMP-dependent	protein	kinase	interacting	domain
Fzo_mitofusin	PF04799.13	gi|84489938|ref|YP_448170.1|	-	0.4	10.2	6.0	0.057	13.0	0.9	1.9	2	0	0	2	2	2	0	fzo-like	conserved	region
Cytochrom_B559a	PF00284.20	gi|84489938|ref|YP_448170.1|	-	0.6	9.9	0.1	0.6	9.9	0.1	2.0	2	0	0	2	2	2	0	Lumenal	portion	of	Cytochrome	b559,	alpha	(gene	psbE)	subunit
YabA	PF06156.13	gi|84489938|ref|YP_448170.1|	-	0.83	10.3	9.5	0.59	10.8	1.4	2.4	2	0	0	2	2	2	0	Initiation	control	protein	YabA
FlxA	PF14282.6	gi|84489938|ref|YP_448170.1|	-	0.96	9.5	6.3	0.81	9.7	0.2	2.3	2	0	0	2	2	2	0	FlxA-like	protein
TSC22	PF01166.18	gi|84489938|ref|YP_448170.1|	-	1.8	8.9	11.5	0.19	12.1	1.8	2.7	3	0	0	3	3	2	0	TSC-22/dip/bun	family
bZIP_2	PF07716.15	gi|84489938|ref|YP_448170.1|	-	7	6.8	10.3	0.73	10.0	2.0	2.4	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Thg1	PF04446.12	gi|84489939|ref|YP_448171.1|	-	1.1e-31	109.5	0.8	2.1e-31	108.5	0.5	1.6	2	0	0	2	2	2	1	tRNAHis	guanylyltransferase
Thg1C	PF14413.6	gi|84489939|ref|YP_448171.1|	-	1.7e-05	25.0	5.5	2.5e-05	24.4	5.5	1.2	1	0	0	1	1	1	1	Thg1	C	terminal	domain
DUF4326	PF14216.6	gi|84489939|ref|YP_448171.1|	-	0.059	14.1	0.0	0.13	13.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4326)
FAS_N	PF17828.1	gi|84489939|ref|YP_448171.1|	-	0.06	13.4	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	N-terminal	domain	in	fatty	acid	synthase	subunit	beta
NurA	PF09376.10	gi|84489939|ref|YP_448171.1|	-	0.076	12.7	0.7	0.1	12.3	0.1	1.5	2	0	0	2	2	2	0	NurA	domain
DUF108	PF01958.18	gi|84489940|ref|YP_448172.1|	-	5.2e-31	106.9	0.2	1e-30	105.9	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.16	gi|84489940|ref|YP_448172.1|	-	2.8e-20	73.1	0.1	5.5e-20	72.2	0.1	1.5	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|84489940|ref|YP_448172.1|	-	2.2e-06	27.8	0.2	1.1e-05	25.5	0.1	2.0	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.22	gi|84489940|ref|YP_448172.1|	-	5.2e-05	24.1	0.1	0.00017	22.4	0.0	1.8	3	0	0	3	3	3	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.24	gi|84489940|ref|YP_448172.1|	-	0.00046	20.6	0.0	0.00071	20.0	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Peptidase_M42	PF05343.14	gi|84489940|ref|YP_448172.1|	-	0.0047	16.0	0.0	0.0088	15.1	0.0	1.4	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
2-Hacid_dh_C	PF02826.19	gi|84489940|ref|YP_448172.1|	-	0.0067	15.8	0.1	0.0099	15.2	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|84489940|ref|YP_448172.1|	-	0.01	16.4	0.4	0.024	15.2	0.4	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Epsilon_antitox	PF08998.11	gi|84489940|ref|YP_448172.1|	-	0.027	14.8	0.1	0.059	13.6	0.1	1.5	1	0	0	1	1	1	0	Bacterial	epsilon	antitoxin
Lsm_C	PF14894.6	gi|84489940|ref|YP_448172.1|	-	0.11	12.3	0.0	4	7.3	0.0	2.7	2	0	0	2	2	2	0	Lsm	C-terminal
PRC	PF05239.16	gi|84489941|ref|YP_448173.1|	-	6.1e-10	39.0	4.6	9.7e-09	35.2	4.6	2.2	1	1	0	1	1	1	1	PRC-barrel	domain
Alpha_Helical	PF18489.1	gi|84489942|ref|YP_448174.1|	-	1.5e-51	173.8	0.1	2.1e-51	173.4	0.1	1.2	1	0	0	1	1	1	1	Alpha	helical	domain
tRNA_bind	PF01588.20	gi|84489942|ref|YP_448174.1|	-	5.2e-16	58.5	0.1	8.3e-16	57.9	0.1	1.3	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
AIG1	PF04548.16	gi|84489942|ref|YP_448174.1|	-	0.035	13.4	0.1	0.054	12.8	0.1	1.3	1	0	0	1	1	1	0	AIG1	family
DUF2096	PF09869.9	gi|84489942|ref|YP_448174.1|	-	0.079	13.0	0.1	0.14	12.2	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
Class_IIIsignal	PF04021.12	gi|84489943|ref|YP_448175.1|	-	1.5e-07	31.2	4.6	1.8e-07	30.9	4.6	1.1	1	0	0	1	1	1	1	Class	III	signal	peptide
TssO	PF17561.2	gi|84489943|ref|YP_448175.1|	-	0.0092	16.1	1.5	0.016	15.3	1.5	1.4	1	1	0	1	1	1	1	Type	VI	secretion	system,	TssO
DUF2730	PF10805.8	gi|84489943|ref|YP_448175.1|	-	0.013	15.5	0.3	0.015	15.4	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
Vpu	PF00558.19	gi|84489943|ref|YP_448175.1|	-	0.061	13.1	0.2	0.074	12.8	0.2	1.2	1	0	0	1	1	1	0	Vpu	protein
HSBP1	PF06825.12	gi|84489943|ref|YP_448175.1|	-	0.12	12.3	1.7	0.2	11.6	1.7	1.5	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
MtrG	PF04210.13	gi|84489943|ref|YP_448175.1|	-	0.28	11.1	0.4	0.28	11.1	0.4	2.1	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
T2SSF	PF00482.23	gi|84489944|ref|YP_448176.1|	-	6.6e-18	64.9	0.2	6.6e-18	64.9	0.2	2.9	2	1	1	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
Sigma_reg_N	PF13800.6	gi|84489944|ref|YP_448176.1|	-	0.038	14.3	0.2	0.038	14.3	0.2	4.5	4	1	0	4	4	4	0	Sigma	factor	regulator	N-terminal
Cullin	PF00888.22	gi|84489944|ref|YP_448176.1|	-	0.1	11.2	0.4	0.14	10.8	0.4	1.1	1	0	0	1	1	1	0	Cullin	family
MIF4G	PF02854.19	gi|84489944|ref|YP_448176.1|	-	0.69	9.5	9.2	1.6	8.3	2.2	2.9	3	0	0	3	3	3	0	MIF4G	domain
DUF2244	PF10003.9	gi|84489944|ref|YP_448176.1|	-	1.4	8.6	8.3	0.096	12.4	0.8	2.4	3	0	0	3	3	3	0	Integral	membrane	protein	(DUF2244)
DUF2207	PF09972.9	gi|84489944|ref|YP_448176.1|	-	1.4	7.6	14.9	0.41	9.3	5.7	2.1	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
YwiC	PF14256.6	gi|84489944|ref|YP_448176.1|	-	2.9	8.2	7.0	0.63	10.4	0.7	2.6	2	1	1	3	3	3	0	YwiC-like	protein
Peptidase_M24	PF00557.24	gi|84489945|ref|YP_448177.1|	-	2.8e-55	187.2	0.0	3.7e-55	186.9	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|84489945|ref|YP_448177.1|	-	6.4e-09	36.6	0.0	1.4e-08	35.5	0.0	1.5	2	0	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
Creatinase_N_2	PF16189.5	gi|84489945|ref|YP_448177.1|	-	0.00011	22.3	0.5	0.00026	21.1	0.5	1.7	1	1	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Peptidase_M66	PF10462.9	gi|84489945|ref|YP_448177.1|	-	0.1	11.5	0.6	0.21	10.5	0.1	1.7	2	0	0	2	2	2	0	Peptidase	M66
Peptidase_M50	PF02163.22	gi|84489946|ref|YP_448178.1|	-	1e-08	34.8	15.2	0.0001	21.7	1.4	3.1	1	1	1	2	2	2	2	Peptidase	family	M50
YcaO	PF02624.16	gi|84489947|ref|YP_448179.1|	-	3.6e-88	296.0	0.0	4.2e-88	295.7	0.0	1.1	1	0	0	1	1	1	1	YcaO	cyclodehydratase,	ATP-ad	Mg2+-binding
PTH2	PF01981.16	gi|84489948|ref|YP_448180.1|	-	2.5e-45	153.5	0.1	2.8e-45	153.4	0.1	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
DUF2179	PF10035.9	gi|84489948|ref|YP_448180.1|	-	0.12	12.2	0.0	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
AA_kinase	PF00696.28	gi|84489949|ref|YP_448181.1|	-	3.2e-16	59.6	0.1	1e-10	41.6	0.1	2.1	1	1	1	2	2	2	2	Amino	acid	kinase	family
SPACA9	PF15120.6	gi|84489949|ref|YP_448181.1|	-	0.12	12.2	0.4	0.31	10.8	0.1	1.8	2	1	0	2	2	2	0	Sperm	acrosome-associated	protein	9
DUF1610	PF07754.11	gi|84489950|ref|YP_448182.1|	-	2e-07	30.9	1.6	2e-07	30.9	1.6	2.5	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1610)
zf-NADH-PPase	PF09297.11	gi|84489950|ref|YP_448182.1|	-	0.012	15.2	6.7	0.54	10.0	0.1	3.3	2	1	1	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
RNHCP	PF12647.7	gi|84489950|ref|YP_448182.1|	-	0.019	14.9	1.6	0.019	14.9	1.6	2.1	1	1	1	2	2	2	0	RNHCP	domain
Rhodanese_C	PF12368.8	gi|84489950|ref|YP_448182.1|	-	0.022	15.1	9.4	0.027	14.9	9.4	1.2	1	0	0	1	1	1	0	Rhodanase	C-terminal
zinc-ribbons_6	PF07191.12	gi|84489950|ref|YP_448182.1|	-	0.029	14.4	11.0	0.051	13.5	11.0	1.5	1	1	0	1	1	1	0	zinc-ribbons
Zn_ribbon_SprT	PF17283.2	gi|84489950|ref|YP_448182.1|	-	0.044	13.7	14.8	1.5	8.8	1.3	4.0	2	1	2	4	4	4	0	SprT-like	zinc	ribbon	domain
C1_2	PF03107.16	gi|84489950|ref|YP_448182.1|	-	0.058	13.7	2.2	0.058	13.7	2.2	2.8	1	1	1	2	2	2	0	C1	domain
zf-ACC	PF17848.1	gi|84489950|ref|YP_448182.1|	-	0.062	13.4	8.6	1.2	9.3	0.1	3.4	2	1	1	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
tRNA-synt_1g	PF09334.11	gi|84489950|ref|YP_448182.1|	-	0.09	11.5	5.5	0.098	11.4	5.5	1.0	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
HypA	PF01155.19	gi|84489950|ref|YP_448182.1|	-	0.15	12.1	10.3	1.6	8.7	10.3	2.0	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0547	PF10571.9	gi|84489950|ref|YP_448182.1|	-	0.25	11.5	0.8	0.25	11.5	0.8	3.9	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
PhnA_Zn_Ribbon	PF08274.12	gi|84489950|ref|YP_448182.1|	-	0.36	10.8	13.6	1.4	8.9	0.3	3.4	2	1	0	2	2	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_2	PF13240.6	gi|84489950|ref|YP_448182.1|	-	0.82	9.5	15.0	1.1	9.1	3.7	3.5	2	1	2	4	4	4	0	zinc-ribbon	domain
DUF530	PF04409.12	gi|84489950|ref|YP_448182.1|	-	1.6	7.0	5.0	1.7	6.9	5.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF530)
zf-TFIIB	PF13453.6	gi|84489950|ref|YP_448182.1|	-	1.8	8.0	13.2	66	3.0	13.1	2.9	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-ribbon_3	PF13248.6	gi|84489950|ref|YP_448182.1|	-	2	8.0	14.3	1.8	8.1	0.3	3.6	3	1	1	4	4	4	0	zinc-ribbon	domain
zinc_ribbon_10	PF10058.9	gi|84489950|ref|YP_448182.1|	-	2.3	8.0	17.4	0.38	10.5	4.2	3.0	2	1	1	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Zn_Tnp_IS1	PF03811.13	gi|84489950|ref|YP_448182.1|	-	8.3	6.2	13.3	24	4.8	9.3	3.0	2	1	0	2	2	2	0	InsA	N-terminal	domain
EF1_GNE	PF00736.19	gi|84489951|ref|YP_448183.1|	-	1.2e-20	73.4	0.2	1.4e-20	73.3	0.2	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
TctA	PF01970.16	gi|84489952|ref|YP_448184.1|	-	5.5e-55	186.8	43.2	6.4e-55	186.5	43.2	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
TMEM191C	PF15194.6	gi|84489952|ref|YP_448184.1|	-	3.5	7.8	6.6	0.51	10.5	1.3	2.3	2	1	1	3	3	3	0	TMEM191C	family
PrmA	PF06325.13	gi|84489953|ref|YP_448185.1|	-	1.5e-07	31.1	0.1	2.6e-07	30.3	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
TRM	PF02005.16	gi|84489953|ref|YP_448185.1|	-	2.3e-06	27.1	0.0	2.3e-06	27.1	0.0	2.0	2	1	0	2	2	2	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
MTS	PF05175.14	gi|84489953|ref|YP_448185.1|	-	4.2e-06	26.4	0.1	7.1e-06	25.7	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|84489953|ref|YP_448185.1|	-	9.3e-06	26.3	0.0	2.1e-05	25.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|84489953|ref|YP_448185.1|	-	1.7e-05	24.5	0.0	3.7e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
DUF4523	PF15023.6	gi|84489953|ref|YP_448185.1|	-	0.042	13.7	1.2	0.086	12.7	1.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4523)
Methyltransf_31	PF13847.6	gi|84489953|ref|YP_448185.1|	-	0.043	13.6	1.0	0.068	13.0	0.1	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
CPT	PF07931.12	gi|84489953|ref|YP_448185.1|	-	0.18	11.6	0.0	0.4	10.5	0.0	1.5	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
T2SSE	PF00437.20	gi|84489954|ref|YP_448186.1|	-	1.2e-61	208.1	0.7	2.5e-61	207.1	0.7	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.12	gi|84489954|ref|YP_448186.1|	-	3.5e-05	23.2	0.3	0.00013	21.4	0.0	2.0	2	0	0	2	2	2	1	Zeta	toxin
ABC_tran	PF00005.27	gi|84489954|ref|YP_448186.1|	-	0.001	19.6	1.4	0.0025	18.3	0.1	2.3	2	0	0	2	2	2	1	ABC	transporter
FtsK_SpoIIIE	PF01580.18	gi|84489954|ref|YP_448186.1|	-	0.0018	17.7	0.1	0.0043	16.4	0.0	1.7	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_19	PF13245.6	gi|84489954|ref|YP_448186.1|	-	0.011	16.1	0.1	0.035	14.4	0.1	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|84489954|ref|YP_448186.1|	-	0.011	16.0	0.1	0.064	13.5	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
AAA_28	PF13521.6	gi|84489954|ref|YP_448186.1|	-	0.016	15.5	0.2	0.043	14.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|84489954|ref|YP_448186.1|	-	0.027	14.8	0.0	0.056	13.8	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
DASH_Dad4	PF08650.10	gi|84489954|ref|YP_448186.1|	-	0.028	14.4	2.2	0.028	14.4	2.2	3.1	3	0	0	3	3	3	0	DASH	complex	subunit	Dad4
Viral_helicase1	PF01443.18	gi|84489954|ref|YP_448186.1|	-	0.095	12.4	0.0	0.21	11.3	0.0	1.6	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA	PF00004.29	gi|84489954|ref|YP_448186.1|	-	0.38	11.2	2.4	14	6.1	0.0	2.5	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|84489954|ref|YP_448186.1|	-	0.51	10.9	0.0	0.51	10.9	0.0	3.3	3	1	0	3	3	3	0	AAA	domain
AAA_17	PF13207.6	gi|84489954|ref|YP_448186.1|	-	6.8	7.1	7.5	17	5.8	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
T2SSF	PF00482.23	gi|84489955|ref|YP_448187.1|	-	1.6e-19	70.1	0.0	1.6e-19	70.1	0.0	2.2	2	0	0	2	2	2	1	Type	II	secretion	system	(T2SS),	protein	F
DUF2207	PF09972.9	gi|84489955|ref|YP_448187.1|	-	0.0011	17.9	13.0	0.0035	16.2	6.9	2.1	1	1	1	2	2	2	2	Predicted	membrane	protein	(DUF2207)
Glycophorin_A	PF01102.18	gi|84489955|ref|YP_448187.1|	-	0.11	12.8	0.5	0.11	12.8	0.5	2.5	2	1	0	2	2	2	0	Glycophorin	A
CbiQ	PF02361.16	gi|84489955|ref|YP_448187.1|	-	9.7	5.7	16.2	4.2	6.9	9.8	2.1	2	0	0	2	2	2	0	Cobalt	transport	protein
NMT1_2	PF13379.6	gi|84489956|ref|YP_448188.1|	-	3.4e-34	118.7	0.0	4.6e-34	118.3	0.0	1.1	1	0	0	1	1	1	1	NMT1-like	family
NMT1	PF09084.11	gi|84489956|ref|YP_448188.1|	-	2e-29	103.1	0.4	2.7e-29	102.7	0.4	1.1	1	0	0	1	1	1	1	NMT1/THI5	like
OpuAC	PF04069.12	gi|84489956|ref|YP_448188.1|	-	9.4e-11	41.8	0.1	1.5e-10	41.1	0.1	1.3	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Phosphonate-bd	PF12974.7	gi|84489956|ref|YP_448188.1|	-	6.8e-10	38.9	0.1	8.6e-10	38.6	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.20	gi|84489956|ref|YP_448188.1|	-	6.5e-09	35.5	0.0	1.4e-08	34.4	0.0	1.5	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Lipoprotein_9	PF03180.14	gi|84489956|ref|YP_448188.1|	-	3.7e-07	29.5	0.4	5.9e-07	28.8	0.4	1.4	1	0	0	1	1	1	1	NLPA	lipoprotein
SBP_bac_1	PF01547.25	gi|84489956|ref|YP_448188.1|	-	5.8e-05	23.2	0.3	0.016	15.2	0.0	2.2	1	1	1	2	2	2	2	Bacterial	extracellular	solute-binding	protein
ABC2_membrane_3	PF12698.7	gi|84489956|ref|YP_448188.1|	-	0.00024	20.4	0.8	0.00043	19.5	0.8	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
NMT1_3	PF16868.5	gi|84489956|ref|YP_448188.1|	-	0.0003	20.3	0.2	0.00056	19.4	0.2	1.5	1	1	0	1	1	1	1	NMT1-like	family
VitK2_biosynth	PF02621.14	gi|84489956|ref|YP_448188.1|	-	0.042	13.4	0.0	0.14	11.7	0.0	1.7	2	0	0	2	2	2	0	Menaquinone	biosynthesis
HD	PF01966.22	gi|84489957|ref|YP_448189.1|	-	4.7e-13	49.4	0.8	4.7e-13	49.4	0.8	1.9	2	0	0	2	2	2	1	HD	domain
tRNA_anti-codon	PF01336.25	gi|84489957|ref|YP_448189.1|	-	8.2e-06	25.7	0.1	2.3e-05	24.3	0.0	1.8	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
TraI_2	PF07514.11	gi|84489957|ref|YP_448189.1|	-	0.00021	20.4	0.1	0.00073	18.6	0.0	1.8	2	0	0	2	2	2	1	Putative	helicase
DUF4539	PF15072.6	gi|84489957|ref|YP_448189.1|	-	0.072	13.1	0.0	0.17	11.9	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4539)
HD_6	PF18019.1	gi|84489957|ref|YP_448189.1|	-	0.1	12.7	0.1	0.25	11.5	0.1	1.6	1	1	0	1	1	1	0	HD	domain
PPP5	PF08321.12	gi|84489957|ref|YP_448189.1|	-	0.71	10.2	11.8	0.28	11.5	0.9	3.3	1	1	2	3	3	3	0	PPP5	TPR	repeat	region
Inos-1-P_synth	PF01658.17	gi|84489958|ref|YP_448190.1|	-	2.7e-31	108.0	0.1	7.2e-31	106.7	0.0	1.7	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
NAD_binding_5	PF07994.12	gi|84489958|ref|YP_448190.1|	-	0.019	14.4	0.0	0.84	9.0	0.0	2.5	1	1	2	3	3	3	0	Myo-inositol-1-phosphate	synthase
Trm56	PF01994.16	gi|84489959|ref|YP_448191.1|	-	3.8e-47	159.1	0.1	5.2e-47	158.7	0.1	1.2	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.19	gi|84489959|ref|YP_448191.1|	-	0.0026	18.0	0.0	0.0034	17.5	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Cellulase	PF00150.18	gi|84489959|ref|YP_448191.1|	-	0.02	14.3	0.1	0.15	11.5	0.0	1.9	1	1	1	2	2	2	0	Cellulase	(glycosyl	hydrolase	family	5)
CobS	PF02654.15	gi|84489960|ref|YP_448192.1|	-	5.9e-40	137.6	13.9	6.8e-40	137.4	13.9	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
Viral_helicase1	PF01443.18	gi|84489961|ref|YP_448193.1|	-	0.096	12.4	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Sof1	PF04158.14	gi|84489961|ref|YP_448193.1|	-	0.12	12.7	0.0	0.22	11.8	0.0	1.4	1	0	0	1	1	1	0	Sof1-like	domain
DUF111	PF01969.17	gi|84489962|ref|YP_448194.1|	-	2e-114	382.6	0.3	2.3e-114	382.4	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
DUF1647	PF07801.11	gi|84489962|ref|YP_448194.1|	-	0.053	13.3	0.2	0.13	12.0	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1647)
TMCCDC2	PF15844.5	gi|84489962|ref|YP_448194.1|	-	0.087	12.8	0.1	0.16	11.9	0.1	1.3	1	0	0	1	1	1	0	Transmembrane	and	coiled-coil	domain-containing	protein	2
QueC	PF06508.13	gi|84489963|ref|YP_448195.1|	-	6.3e-66	221.9	0.4	7.2e-66	221.7	0.4	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|84489963|ref|YP_448195.1|	-	5e-06	26.4	0.0	0.00019	21.3	0.0	2.2	2	0	0	2	2	2	1	PP-loop	family
NAD_synthase	PF02540.17	gi|84489963|ref|YP_448195.1|	-	1.2e-05	24.6	0.0	3.2e-05	23.2	0.0	1.6	2	0	0	2	2	2	1	NAD	synthase
ThiI	PF02568.14	gi|84489963|ref|YP_448195.1|	-	1.4e-05	24.8	0.2	0.063	12.9	0.0	2.5	2	1	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.21	gi|84489963|ref|YP_448195.1|	-	1.8e-05	24.6	0.0	2.8e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.16	gi|84489963|ref|YP_448195.1|	-	0.0024	16.7	0.0	0.0038	16.1	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
Arginosuc_synth	PF00764.19	gi|84489963|ref|YP_448195.1|	-	0.023	14.0	0.0	0.035	13.4	0.0	1.3	1	0	0	1	1	1	0	Arginosuccinate	synthase
DUF2284	PF10050.9	gi|84489964|ref|YP_448196.1|	-	3e-16	59.6	0.1	3.7e-16	59.3	0.1	1.1	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2284)
Flu_PB1	PF00602.17	gi|84489964|ref|YP_448196.1|	-	0.046	11.8	0.0	0.057	11.5	0.0	1.2	1	0	0	1	1	1	0	Influenza	RNA-dependent	RNA	polymerase	subunit	PB1
PYC_OADA	PF02436.18	gi|84489965|ref|YP_448197.1|	-	3.9e-56	189.9	0.4	7.2e-56	189.1	0.4	1.4	1	0	0	1	1	1	1	Conserved	carboxylase	domain
HMGL-like	PF00682.19	gi|84489965|ref|YP_448197.1|	-	4.2e-47	160.9	0.1	6.6e-47	160.3	0.1	1.3	1	0	0	1	1	1	1	HMGL-like
Biotin_lipoyl	PF00364.22	gi|84489965|ref|YP_448197.1|	-	1.7e-19	69.4	4.6	4e-19	68.2	4.6	1.7	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|84489965|ref|YP_448197.1|	-	2.3e-10	40.1	2.9	0.00016	21.4	0.2	3.3	2	1	1	3	3	3	2	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|84489965|ref|YP_448197.1|	-	0.00049	20.8	0.3	0.77	10.5	0.0	2.9	3	0	0	3	3	3	2	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|84489965|ref|YP_448197.1|	-	0.00094	18.5	0.3	0.58	9.3	0.1	2.5	1	1	1	2	2	2	2	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
GCV_H	PF01597.19	gi|84489965|ref|YP_448197.1|	-	0.0028	17.6	0.4	0.0087	15.9	0.4	1.8	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
PYNP_C	PF07831.13	gi|84489965|ref|YP_448197.1|	-	0.01	15.4	1.0	0.55	9.9	0.1	2.6	2	0	0	2	2	2	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
RnfC_N	PF13375.6	gi|84489965|ref|YP_448197.1|	-	0.021	14.8	0.2	0.066	13.2	0.2	1.8	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
DUF2118	PF09891.9	gi|84489965|ref|YP_448197.1|	-	0.033	14.1	0.0	0.14	12.1	0.0	2.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Sacchrp_dh_NADP	PF03435.18	gi|84489965|ref|YP_448197.1|	-	0.083	13.1	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
PTS_EIIA_1	PF00358.20	gi|84489965|ref|YP_448197.1|	-	0.093	12.5	1.3	1.6	8.5	0.3	2.7	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
Ribosomal_L37e	PF01907.19	gi|84489966|ref|YP_448198.1|	-	7.1e-25	86.9	11.0	8.6e-25	86.7	11.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L37e
NOB1_Zn_bind	PF08772.11	gi|84489966|ref|YP_448198.1|	-	0.0017	18.5	3.0	0.0021	18.2	3.0	1.2	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.7	gi|84489966|ref|YP_448198.1|	-	0.004	17.1	2.3	0.0052	16.8	2.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Ephrin_rec_like	PF07699.13	gi|84489966|ref|YP_448198.1|	-	0.025	14.4	2.1	0.037	13.8	2.1	1.3	1	0	0	1	1	1	0	Putative	ephrin-receptor	like
zinc_ribbon_15	PF17032.5	gi|84489966|ref|YP_448198.1|	-	0.03	15.1	3.1	0.043	14.6	3.1	1.3	1	0	0	1	1	1	0	zinc-ribbon	family
zf-dskA_traR	PF01258.17	gi|84489966|ref|YP_448198.1|	-	0.082	12.9	3.3	3	7.9	3.3	2.3	1	1	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
HypA	PF01155.19	gi|84489966|ref|YP_448198.1|	-	0.13	12.3	0.9	0.15	12.1	0.9	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_2	PF13240.6	gi|84489966|ref|YP_448198.1|	-	0.21	11.3	6.9	0.43	10.4	6.1	1.8	1	1	1	2	2	2	0	zinc-ribbon	domain
LSM	PF01423.22	gi|84489967|ref|YP_448199.1|	-	3e-24	84.5	0.1	3.5e-24	84.3	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|84489967|ref|YP_448199.1|	-	0.0027	17.8	0.0	0.0029	17.7	0.0	1.3	1	0	0	1	1	1	1	Ataxin	2	SM	domain
FliS_cochap	PF16522.5	gi|84489967|ref|YP_448199.1|	-	0.091	12.7	0.1	0.095	12.6	0.1	1.1	1	0	0	1	1	1	0	Flagellar	FLiS	export	co-chaperone,	HP1076
DUF150_C	PF17384.2	gi|84489967|ref|YP_448199.1|	-	0.12	12.6	0.0	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	RimP	C-terminal	SH3	domain
PUA	PF01472.20	gi|84489968|ref|YP_448200.1|	-	1.5e-16	60.1	1.0	2.4e-16	59.5	1.0	1.4	1	0	0	1	1	1	1	PUA	domain
DUF1947	PF09183.10	gi|84489968|ref|YP_448200.1|	-	5.6e-11	42.6	3.7	1.4e-10	41.3	3.7	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
Pre-PUA	PF17832.1	gi|84489968|ref|YP_448200.1|	-	1.3e-06	28.9	1.3	6e-06	26.9	1.3	2.0	1	1	0	1	1	1	1	Pre-PUA-like	domain
UPF0113	PF03657.13	gi|84489968|ref|YP_448200.1|	-	0.039	14.2	0.5	0.062	13.6	0.1	1.5	2	0	0	2	2	2	0	UPF0113	PUA	domain
Creatininase	PF02633.14	gi|84489969|ref|YP_448201.1|	-	6.8e-11	42.1	0.1	1.2e-10	41.2	0.1	1.5	1	0	0	1	1	1	1	Creatinine	amidohydrolase
ATP-synt_E	PF05680.12	gi|84489969|ref|YP_448201.1|	-	0.06	13.7	0.0	0.32	11.4	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	E	chain
LTV	PF04180.14	gi|84489969|ref|YP_448201.1|	-	0.13	11.9	0.0	0.16	11.7	0.0	1.1	1	0	0	1	1	1	0	Low	temperature	viability	protein
DEAD	PF00270.29	gi|84489970|ref|YP_448202.1|	-	2.1e-25	89.5	1.0	1.1e-24	87.1	0.1	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|84489970|ref|YP_448202.1|	-	2.1e-12	47.4	3.3	4.4e-12	46.3	0.0	2.5	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|84489970|ref|YP_448202.1|	-	7.7e-12	45.5	0.2	4.6e-11	43.0	0.0	2.5	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DSHCT	PF08148.12	gi|84489970|ref|YP_448202.1|	-	0.052	13.2	0.0	0.25	11.0	0.0	2.0	2	0	0	2	2	2	0	DSHCT	(NUC185)	domain
SecA_DEAD	PF07517.14	gi|84489970|ref|YP_448202.1|	-	0.054	12.8	0.0	0.14	11.5	0.0	1.7	1	0	0	1	1	1	0	SecA	DEAD-like	domain
CbiC	PF02570.15	gi|84489971|ref|YP_448203.1|	-	2.1e-64	216.8	1.0	2.4e-64	216.6	1.0	1.0	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
Aminotran_3	PF00202.21	gi|84489972|ref|YP_448204.1|	-	1.6e-66	224.6	0.0	2e-66	224.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|84489972|ref|YP_448204.1|	-	0.0032	16.7	0.0	0.0038	16.4	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
PTA_PTB	PF01515.19	gi|84489973|ref|YP_448205.1|	-	7.5e-07	28.8	0.0	0.00023	20.6	0.0	2.4	3	0	0	3	3	3	2	Phosphate	acetyl/butaryl	transferase
Prenyltransf	PF01255.19	gi|84489974|ref|YP_448206.1|	-	7e-80	267.7	0.1	8.1e-80	267.5	0.1	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
P22_Tail-4	PF11650.8	gi|84489974|ref|YP_448206.1|	-	0.0066	16.4	0.1	0.097	12.6	0.0	2.3	1	1	0	2	2	2	1	P22	tail	accessory	factor
TatD_DNase	PF01026.21	gi|84489975|ref|YP_448207.1|	-	3.1e-64	216.8	0.6	3.4e-64	216.7	0.6	1.0	1	0	0	1	1	1	1	TatD	related	DNase
tRNA-synt_1	PF00133.22	gi|84489976|ref|YP_448208.1|	-	0.00033	19.0	0.5	0.00034	19.0	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DUF1611_N	PF17396.2	gi|84489976|ref|YP_448208.1|	-	0.17	12.2	0.0	0.27	11.5	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
RibD_C	PF01872.17	gi|84489977|ref|YP_448209.1|	-	2.7e-55	187.3	0.0	3.1e-55	187.1	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
PHP	PF02811.19	gi|84489978|ref|YP_448210.1|	-	1.3e-08	35.3	0.0	1.4e-08	35.2	0.0	1.3	1	1	0	1	1	1	1	PHP	domain
RNase_P_p30	PF01876.16	gi|84489978|ref|YP_448210.1|	-	1.9e-05	24.3	0.1	3.4e-05	23.4	0.1	1.4	1	1	0	1	1	1	1	RNase	P	subunit	p30
DUF2087	PF09860.9	gi|84489978|ref|YP_448210.1|	-	0.097	12.8	0.0	5	7.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2087)
GHMP_kinases_N	PF00288.26	gi|84489979|ref|YP_448211.1|	-	6.6e-06	26.3	0.3	1.3e-05	25.4	0.3	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Ribosomal_S9	PF00380.19	gi|84489979|ref|YP_448211.1|	-	0.16	12.5	0.0	0.32	11.5	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S9/S16
HTH_24	PF13412.6	gi|84489980|ref|YP_448212.1|	-	1.1e-13	50.5	0.1	1.1e-11	44.1	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|84489980|ref|YP_448212.1|	-	1.4e-09	37.7	0.0	3.7e-09	36.3	0.0	1.6	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.22	gi|84489980|ref|YP_448212.1|	-	2.5e-09	36.9	0.0	6.5e-07	29.2	0.0	2.3	2	0	0	2	2	2	1	MarR	family
HTH_Crp_2	PF13545.6	gi|84489980|ref|YP_448212.1|	-	1.1e-06	28.4	0.0	4.9e-05	23.2	0.0	2.3	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_11	PF08279.12	gi|84489980|ref|YP_448212.1|	-	6.8e-06	25.9	0.1	1.7e-05	24.6	0.1	1.7	2	0	0	2	2	1	1	HTH	domain
HTH_27	PF13463.6	gi|84489980|ref|YP_448212.1|	-	2e-05	25.0	0.0	4.8e-05	23.8	0.0	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.10	gi|84489980|ref|YP_448212.1|	-	0.00015	21.5	0.0	0.00042	20.1	0.0	1.6	2	0	0	2	2	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.19	gi|84489980|ref|YP_448212.1|	-	0.00021	21.1	0.1	0.0074	16.1	0.0	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|84489980|ref|YP_448212.1|	-	0.00028	20.7	0.0	0.00065	19.5	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.19	gi|84489980|ref|YP_448212.1|	-	0.0014	18.8	0.1	0.0037	17.4	0.1	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.6	gi|84489980|ref|YP_448212.1|	-	0.0037	17.0	0.0	0.0074	16.1	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_36	PF13730.6	gi|84489980|ref|YP_448212.1|	-	0.0065	16.4	0.0	0.017	15.0	0.0	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|84489980|ref|YP_448212.1|	-	0.0096	16.2	0.0	0.034	14.5	0.0	1.8	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_20	PF12840.7	gi|84489980|ref|YP_448212.1|	-	0.015	15.3	0.0	0.098	12.7	0.0	2.1	2	1	0	2	2	2	0	Helix-turn-helix	domain
GntR	PF00392.21	gi|84489980|ref|YP_448212.1|	-	0.018	14.7	0.0	0.056	13.1	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_34	PF13601.6	gi|84489980|ref|YP_448212.1|	-	0.032	14.4	0.1	0.087	13.0	0.1	1.8	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Mnd1	PF03962.15	gi|84489980|ref|YP_448212.1|	-	0.055	13.8	0.7	0.19	12.0	0.7	1.9	1	1	0	1	1	1	0	Mnd1	HTH	domain
LexA_DNA_bind	PF01726.16	gi|84489980|ref|YP_448212.1|	-	0.084	12.7	0.0	0.8	9.5	0.0	2.4	3	0	0	3	3	3	0	LexA	DNA	binding	domain
DUF1389	PF07146.11	gi|84489980|ref|YP_448212.1|	-	0.091	12.0	0.0	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1389)
HTH_3	PF01381.22	gi|84489980|ref|YP_448212.1|	-	0.092	12.8	0.0	0.22	11.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix
KORA	PF16509.5	gi|84489980|ref|YP_448212.1|	-	0.11	12.7	0.0	0.33	11.3	0.0	1.8	1	0	0	1	1	1	0	TrfB	plasmid	transcriptional	repressor
DUF2023	PF09633.10	gi|84489980|ref|YP_448212.1|	-	0.13	12.4	0.1	1.3	9.2	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2023)
Sigma70_r4_2	PF08281.12	gi|84489980|ref|YP_448212.1|	-	0.17	11.6	0.0	0.44	10.2	0.0	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
DHHA1	PF02272.19	gi|84489981|ref|YP_448213.1|	-	6.5e-20	71.9	0.0	1.9e-19	70.4	0.0	1.7	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.20	gi|84489981|ref|YP_448213.1|	-	0.0033	17.6	0.1	0.0078	16.4	0.1	1.6	1	0	0	1	1	1	1	DHH	family
PPR	PF01535.20	gi|84489981|ref|YP_448213.1|	-	0.11	12.8	0.1	0.31	11.4	0.1	1.8	1	0	0	1	1	1	0	PPR	repeat
SRP19	PF01922.17	gi|84489982|ref|YP_448214.1|	-	3.7e-24	85.5	0.2	4.4e-24	85.2	0.2	1.1	1	0	0	1	1	1	1	SRP19	protein
DUF2863	PF11062.8	gi|84489982|ref|YP_448214.1|	-	0.11	10.9	0.0	0.12	10.8	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2863)
HEM4	PF02602.15	gi|84489983|ref|YP_448215.1|	-	2.6e-46	157.9	0.0	3e-46	157.7	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
ParB_C	PF18064.1	gi|84489983|ref|YP_448215.1|	-	0.24	11.6	0.0	0.49	10.6	0.0	1.5	1	0	0	1	1	1	0	Centromere-binding	protein	ParB	C-terminal
TP_methylase	PF00590.20	gi|84489984|ref|YP_448216.1|	-	2.5e-44	151.8	0.0	2.8e-44	151.6	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
GATase_5	PF13507.6	gi|84489985|ref|YP_448217.1|	-	6.5e-41	140.1	0.0	9.5e-41	139.6	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|84489985|ref|YP_448217.1|	-	7.7e-09	35.6	0.0	1.2e-08	34.9	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase	PF00117.28	gi|84489985|ref|YP_448217.1|	-	1.8e-08	34.4	0.0	2.3e-08	34.0	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.14	gi|84489985|ref|YP_448217.1|	-	1.9e-08	34.1	0.1	4.1e-08	33.1	0.0	1.5	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.19	gi|84489985|ref|YP_448217.1|	-	0.001	19.0	0.0	0.0026	17.7	0.0	1.7	2	0	0	2	2	2	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|84489985|ref|YP_448217.1|	-	0.095	12.4	0.0	0.2	11.4	0.0	1.6	1	0	0	1	1	1	0	Peptidase	C26
PurS	PF02700.14	gi|84489986|ref|YP_448218.1|	-	2.2e-26	91.8	0.9	2.4e-26	91.7	0.9	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
MatP_C	PF17414.2	gi|84489986|ref|YP_448218.1|	-	0.081	13.1	0.3	0.15	12.3	0.3	1.5	1	0	0	1	1	1	0	MatP	C-terminal	ribbon-helix-helix	domain
Toprim_C_rpt	PF13368.6	gi|84489986|ref|YP_448218.1|	-	0.13	12.2	0.3	0.23	11.5	0.1	1.5	2	0	0	2	2	2	0	Topoisomerase	C-terminal	repeat
SAICAR_synt	PF01259.18	gi|84489987|ref|YP_448219.1|	-	1.8e-62	211.2	0.4	2.6e-62	210.7	0.4	1.2	1	0	0	1	1	1	1	SAICAR	synthetase
SIS	PF01380.22	gi|84489988|ref|YP_448220.1|	-	2.6e-47	160.0	0.1	5.5e-26	91.0	0.8	2.4	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.6	gi|84489988|ref|YP_448220.1|	-	2.7e-23	82.7	0.0	4.7e-23	81.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|84489988|ref|YP_448220.1|	-	7.6e-20	71.1	0.0	1.4e-19	70.2	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|84489988|ref|YP_448220.1|	-	5.2e-05	22.3	0.0	8.2e-05	21.6	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
XRN_M	PF17846.1	gi|84489989|ref|YP_448221.1|	-	0.055	12.4	7.2	0.064	12.2	7.2	1.0	1	0	0	1	1	1	0	Xrn1	helical	domain
LMBR1	PF04791.16	gi|84489989|ref|YP_448221.1|	-	0.64	8.9	3.5	0.67	8.8	3.5	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Menin	PF05053.13	gi|84489989|ref|YP_448221.1|	-	1.2	7.5	10.0	1.4	7.2	10.0	1.0	1	0	0	1	1	1	0	Menin
Presenilin	PF01080.17	gi|84489989|ref|YP_448221.1|	-	5.6	5.6	5.7	6.3	5.5	5.7	1.1	1	0	0	1	1	1	0	Presenilin
Macoilin	PF09726.9	gi|84489989|ref|YP_448221.1|	-	6.4	5.2	12.1	7.1	5.1	12.1	1.0	1	0	0	1	1	1	0	Macoilin	family
4HBT_2	PF13279.6	gi|84489990|ref|YP_448222.1|	-	4.1e-08	33.7	0.1	5.3e-08	33.4	0.1	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.22	gi|84489990|ref|YP_448222.1|	-	1.7e-07	31.4	0.0	2.9e-07	30.8	0.0	1.3	1	1	0	1	1	1	1	Thioesterase	superfamily
Amidohydro_1	PF01979.20	gi|84489991|ref|YP_448223.1|	-	1.5e-34	119.8	0.0	1.9e-34	119.5	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|84489991|ref|YP_448223.1|	-	1.1e-05	25.1	0.0	0.0098	15.4	0.1	2.3	2	1	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|84489991|ref|YP_448223.1|	-	0.01	15.2	0.0	0.017	14.5	0.0	1.3	1	0	0	1	1	1	0	Adenosine/AMP	deaminase
CPSase_L_D2	PF02786.17	gi|84489992|ref|YP_448224.1|	-	1e-113	378.1	0.2	1.2e-74	250.3	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.19	gi|84489992|ref|YP_448224.1|	-	2.4e-43	147.4	1.2	6.1e-43	146.0	1.2	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
ATP-grasp	PF02222.22	gi|84489992|ref|YP_448224.1|	-	4.9e-20	71.8	0.0	3.8e-11	42.9	0.0	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
MGS	PF02142.22	gi|84489992|ref|YP_448224.1|	-	4.1e-17	62.2	0.1	6.6e-16	58.3	0.0	3.0	3	0	0	3	3	3	1	MGS-like	domain
Dala_Dala_lig_C	PF07478.13	gi|84489992|ref|YP_448224.1|	-	4.1e-15	55.9	1.4	4.1e-07	29.8	0.0	2.9	3	0	0	3	3	3	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.14	gi|84489992|ref|YP_448224.1|	-	9.6e-13	48.5	0.6	6.6e-06	26.3	0.1	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|84489992|ref|YP_448224.1|	-	1.1e-12	47.8	0.0	7e-05	22.6	0.0	3.1	2	1	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
GARS_A	PF01071.19	gi|84489992|ref|YP_448224.1|	-	1e-10	41.7	0.1	1.5e-05	24.9	0.0	2.5	2	0	0	2	2	2	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_4	PF13535.6	gi|84489992|ref|YP_448224.1|	-	4.9e-06	26.2	0.7	0.072	12.7	0.0	3.1	3	1	0	3	3	3	2	ATP-grasp	domain
ATP-grasp_5	PF13549.6	gi|84489992|ref|YP_448224.1|	-	0.0005	19.6	0.0	0.88	9.0	0.0	2.8	2	0	0	2	2	2	2	ATP-grasp	domain
Jag_N	PF14804.6	gi|84489992|ref|YP_448224.1|	-	0.002	18.4	0.1	0.011	16.0	0.1	2.5	1	0	0	1	1	1	1	Jag	N-terminus
Peripla_BP_6	PF13458.6	gi|84489992|ref|YP_448224.1|	-	0.01	15.6	0.0	0.58	9.8	0.0	2.5	2	0	0	2	2	2	1	Periplasmic	binding	protein
PrpR_N	PF06506.11	gi|84489992|ref|YP_448224.1|	-	0.043	13.4	0.3	11	5.5	0.0	4.0	4	1	1	5	5	5	0	Propionate	catabolism	activator
DUF4176	PF13780.6	gi|84489992|ref|YP_448224.1|	-	0.059	13.4	0.1	5.4	7.1	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4176)
TrkA_N	PF02254.18	gi|84489992|ref|YP_448224.1|	-	0.3	11.4	3.2	19	5.6	0.4	3.4	3	1	0	3	3	2	0	TrkA-N	domain
CPSase_sm_chain	PF00988.22	gi|84489993|ref|YP_448225.1|	-	2.6e-47	159.8	0.0	4.9e-47	158.9	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.28	gi|84489993|ref|YP_448225.1|	-	4.2e-43	147.3	0.0	6.6e-43	146.7	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|84489993|ref|YP_448225.1|	-	4.3e-08	33.2	1.5	6.7e-05	22.7	1.5	3.2	1	1	0	1	1	1	1	Peptidase	C26
DJ-1_PfpI	PF01965.24	gi|84489993|ref|YP_448225.1|	-	0.0033	17.2	0.2	0.0062	16.4	0.2	1.4	1	0	0	1	1	1	1	DJ-1/PfpI	family
Acetyltransf_1	PF00583.25	gi|84489994|ref|YP_448226.1|	-	1.5e-17	63.9	0.0	1.9e-17	63.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|84489994|ref|YP_448226.1|	-	1.2e-12	47.9	0.0	1.5e-12	47.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|84489994|ref|YP_448226.1|	-	5.6e-12	45.9	0.3	7.8e-12	45.4	0.3	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|84489994|ref|YP_448226.1|	-	6.5e-05	23.1	1.4	8.9e-05	22.7	1.4	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|84489994|ref|YP_448226.1|	-	0.0026	17.7	0.2	0.0066	16.4	0.1	1.7	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_8	PF13523.6	gi|84489994|ref|YP_448226.1|	-	0.0054	16.4	0.0	0.015	14.9	0.0	1.7	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.7	gi|84489994|ref|YP_448226.1|	-	0.11	12.7	0.0	0.15	12.2	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
UPF0146	PF03686.13	gi|84489995|ref|YP_448227.1|	-	1.9e-32	111.8	0.1	2.2e-32	111.6	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
E1-E2_ATPase	PF00122.20	gi|84489996|ref|YP_448228.1|	-	1.8e-57	193.8	2.1	1.8e-57	193.8	2.1	3.6	4	1	0	4	4	4	2	E1-E2	ATPase
Cation_ATPase_C	PF00689.21	gi|84489996|ref|YP_448228.1|	-	4.3e-43	147.1	10.5	4.3e-43	147.1	10.5	2.7	3	0	0	3	3	3	1	Cation	transporting	ATPase,	C-terminus
Cation_ATPase_N	PF00690.26	gi|84489996|ref|YP_448228.1|	-	2.1e-21	75.4	0.3	4.7e-21	74.2	0.3	1.7	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
Hydrolase	PF00702.26	gi|84489996|ref|YP_448228.1|	-	2e-20	74.0	1.3	6.1e-20	72.4	0.3	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase	PF13246.6	gi|84489996|ref|YP_448228.1|	-	5.3e-14	52.1	0.1	2.5e-13	49.9	0.0	2.2	2	0	0	2	2	2	1	Cation	transport	ATPase	(P-type)
Hydrolase_3	PF08282.12	gi|84489996|ref|YP_448228.1|	-	5.7e-06	26.3	1.2	5.7e-06	26.3	1.2	4.1	4	1	1	5	5	5	1	haloacid	dehalogenase-like	hydrolase
T2SSF	PF00482.23	gi|84489996|ref|YP_448228.1|	-	0.051	13.5	0.1	0.32	11.0	0.0	2.4	2	0	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
Glycophorin_A	PF01102.18	gi|84489996|ref|YP_448228.1|	-	0.056	13.7	0.0	0.22	11.8	0.0	2.0	1	0	0	1	1	1	0	Glycophorin	A
Intein_splicing	PF14890.6	gi|84489996|ref|YP_448228.1|	-	0.12	12.3	0.0	1.9	8.4	0.0	3.1	2	1	0	2	2	2	0	Intein	splicing	domain
Uteroglobin	PF01099.17	gi|84489996|ref|YP_448228.1|	-	3.4	8.1	5.6	1.2	9.5	0.2	2.8	3	0	0	3	3	3	0	Uteroglobin	family
DUF1761	PF08570.10	gi|84489996|ref|YP_448228.1|	-	5.4	7.3	9.6	55	4.0	4.2	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1761)
CbiJ	PF02571.14	gi|84489997|ref|YP_448229.1|	-	1.4e-63	214.5	0.6	1.6e-63	214.4	0.6	1.0	1	0	0	1	1	1	1	Precorrin-6x	reductase	CbiJ/CobK
SpoU_sub_bind	PF08032.12	gi|84489997|ref|YP_448229.1|	-	0.0018	18.5	0.8	1.1	9.6	0.0	3.1	3	1	0	3	3	3	2	RNA	2'-O	ribose	methyltransferase	substrate	binding
AAA	PF00004.29	gi|84489998|ref|YP_448230.1|	-	2.5e-46	157.4	0.2	1.2e-45	155.2	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|84489998|ref|YP_448230.1|	-	3.3e-12	46.0	0.3	7.3e-12	44.9	0.3	1.6	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_2	PF07724.14	gi|84489998|ref|YP_448230.1|	-	7.8e-09	35.9	0.0	2e-08	34.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.14	gi|84489998|ref|YP_448230.1|	-	5.8e-07	29.6	0.6	1.5e-05	25.0	0.0	3.1	2	2	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.12	gi|84489998|ref|YP_448230.1|	-	5.9e-06	26.1	0.2	2.5e-05	24.1	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Prot_ATP_ID_OB	PF16450.5	gi|84489998|ref|YP_448230.1|	-	7.7e-06	25.8	0.0	1.7e-05	24.7	0.0	1.6	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_16	PF13191.6	gi|84489998|ref|YP_448230.1|	-	1.9e-05	25.1	0.1	0.0016	18.9	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|84489998|ref|YP_448230.1|	-	0.00019	21.7	0.1	0.015	15.6	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|84489998|ref|YP_448230.1|	-	0.0014	18.9	0.0	0.0024	18.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|84489998|ref|YP_448230.1|	-	0.0015	17.8	0.0	0.0032	16.7	0.0	1.5	1	0	0	1	1	1	1	TIP49	P-loop	domain
DUF815	PF05673.13	gi|84489998|ref|YP_448230.1|	-	0.0017	17.6	0.0	0.0036	16.5	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.18	gi|84489998|ref|YP_448230.1|	-	0.0022	17.9	0.4	0.13	12.0	0.1	3.0	2	1	0	2	2	2	1	Bacterial	dnaA	protein
Mg_chelatase	PF01078.21	gi|84489998|ref|YP_448230.1|	-	0.003	17.0	0.1	0.023	14.1	0.1	2.3	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_14	PF13173.6	gi|84489998|ref|YP_448230.1|	-	0.0041	17.1	0.0	0.013	15.5	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|84489998|ref|YP_448230.1|	-	0.0042	16.8	0.0	0.011	15.4	0.0	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|84489998|ref|YP_448230.1|	-	0.005	16.4	0.2	0.013	15.0	0.0	1.9	2	1	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_33	PF13671.6	gi|84489998|ref|YP_448230.1|	-	0.0057	16.8	0.0	0.011	15.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.22	gi|84489998|ref|YP_448230.1|	-	0.011	16.2	0.0	0.024	15.0	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Parvo_NS1	PF01057.17	gi|84489998|ref|YP_448230.1|	-	0.012	14.7	0.0	0.032	13.3	0.0	1.7	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
Sigma54_activat	PF00158.26	gi|84489998|ref|YP_448230.1|	-	0.013	15.2	0.1	0.21	11.3	0.1	2.4	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|84489998|ref|YP_448230.1|	-	0.029	14.9	1.9	0.078	13.5	0.0	2.6	3	1	0	3	3	3	0	AAA	domain
AAA_3	PF07726.11	gi|84489998|ref|YP_448230.1|	-	0.036	13.9	0.0	0.34	10.8	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|84489998|ref|YP_448230.1|	-	0.054	13.2	0.2	0.15	11.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Torsin	PF06309.11	gi|84489998|ref|YP_448230.1|	-	0.062	13.4	0.0	0.15	12.2	0.0	1.6	1	0	0	1	1	1	0	Torsin
PhoH	PF02562.16	gi|84489998|ref|YP_448230.1|	-	0.067	12.6	0.1	0.16	11.4	0.1	1.6	1	0	0	1	1	1	0	PhoH-like	protein
DUF5446	PF17522.2	gi|84489998|ref|YP_448230.1|	-	0.082	13.1	0.8	0.28	11.4	0.8	1.9	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5446)
NACHT	PF05729.12	gi|84489998|ref|YP_448230.1|	-	0.14	12.0	0.1	1.3	9.0	0.0	2.2	1	1	1	2	2	2	0	NACHT	domain
AAA_11	PF13086.6	gi|84489998|ref|YP_448230.1|	-	0.37	10.5	3.6	0.78	9.5	0.0	2.5	3	0	0	3	3	3	0	AAA	domain
ATPase	PF06745.13	gi|84489998|ref|YP_448230.1|	-	1.9	7.8	5.7	0.59	9.4	0.1	2.8	3	1	1	4	4	4	0	KaiC
HTH_3	PF01381.22	gi|84489999|ref|YP_448231.1|	-	3.7e-09	36.5	0.3	6.2e-09	35.8	0.2	1.5	1	1	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|84489999|ref|YP_448231.1|	-	7.2e-06	25.9	2.5	1.6e-05	24.8	0.4	2.1	1	1	1	2	2	2	1	Helix-turn-helix	domain
Arc_trans_TRASH	PF08394.10	gi|84489999|ref|YP_448231.1|	-	0.03	14.6	3.4	0.11	12.9	3.4	2.0	1	0	0	1	1	1	0	Archaeal	TRASH	domain
HTH_25	PF13413.6	gi|84489999|ref|YP_448231.1|	-	0.049	13.5	3.0	0.11	12.4	0.1	2.4	2	1	0	2	2	2	0	Helix-turn-helix	domain
DUF356	PF04009.12	gi|84490000|ref|YP_448232.1|	-	4.7e-38	129.7	3.5	5.4e-38	129.5	3.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF356)
Mur_ligase_M	PF08245.12	gi|84490003|ref|YP_448235.1|	-	5.6e-32	111.3	0.3	1.2e-30	107.0	0.3	2.4	1	1	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|84490003|ref|YP_448235.1|	-	8.4e-07	29.2	0.0	2.3e-06	27.8	0.0	1.7	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase_M	PF08245.12	gi|84490004|ref|YP_448236.1|	-	2e-16	60.6	0.1	3.8e-16	59.6	0.1	1.5	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Pyr_redox_2	PF07992.14	gi|84490004|ref|YP_448236.1|	-	0.012	14.8	0.0	0.38	9.9	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.6	gi|84490004|ref|YP_448236.1|	-	0.012	16.0	0.0	0.029	14.8	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Mur_ligase_C	PF02875.21	gi|84490004|ref|YP_448236.1|	-	0.013	15.7	0.0	0.047	13.9	0.0	1.9	2	0	0	2	2	2	0	Mur	ligase	family,	glutamate	ligase	domain
FAD_binding_3	PF01494.19	gi|84490004|ref|YP_448236.1|	-	0.063	12.5	0.0	0.088	12.0	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
XdhC_C	PF13478.6	gi|84490004|ref|YP_448236.1|	-	0.075	13.5	0.0	0.21	12.1	0.0	1.9	1	1	1	2	2	2	0	XdhC	Rossmann	domain
Sacchrp_dh_NADP	PF03435.18	gi|84490004|ref|YP_448236.1|	-	0.075	13.3	0.1	2.9	8.2	0.0	2.6	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
GIDA	PF01134.22	gi|84490004|ref|YP_448236.1|	-	0.077	12.1	0.1	6.9	5.6	0.0	2.5	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
Arteri_nsp7a	PF16749.5	gi|84490004|ref|YP_448236.1|	-	0.078	13.2	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Arterivirus	nonstructural	protein	7	alpha
Mur_ligase_M	PF08245.12	gi|84490005|ref|YP_448237.1|	-	1.1e-14	54.9	2.7	2e-14	54.1	2.7	1.5	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|84490005|ref|YP_448237.1|	-	0.00064	19.9	0.1	0.022	15.0	0.0	3.4	4	1	1	5	5	5	1	Mur	ligase	family,	glutamate	ligase	domain
Pyr_redox	PF00070.27	gi|84490005|ref|YP_448237.1|	-	0.058	14.0	1.5	4.2	8.0	0.1	3.4	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Glycos_transf_4	PF00953.21	gi|84490006|ref|YP_448238.1|	-	5.8e-29	101.1	10.6	5.8e-29	101.1	10.6	3.7	3	1	1	4	4	4	2	Glycosyl	transferase	family	4
MraY_sig1	PF10555.9	gi|84490006|ref|YP_448238.1|	-	0.018	14.5	5.6	0.062	12.9	5.6	1.9	1	0	0	1	1	1	0	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
UPF0154	PF03672.13	gi|84490006|ref|YP_448238.1|	-	1.6	8.8	3.8	14	5.8	0.0	3.3	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
ATP-grasp_3	PF02655.14	gi|84490007|ref|YP_448239.1|	-	3.5e-13	49.9	0.3	2e-12	47.5	0.3	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|84490007|ref|YP_448239.1|	-	2.2e-09	37.1	0.0	4.9e-09	36.0	0.0	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
RimK	PF08443.11	gi|84490007|ref|YP_448239.1|	-	1.7e-08	34.3	0.1	2.5e-07	30.5	0.1	2.2	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|84490007|ref|YP_448239.1|	-	3.4e-08	33.3	0.0	1.9e-07	30.9	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATPgrasp_ST	PF14397.6	gi|84490007|ref|YP_448239.1|	-	4.1e-06	26.3	0.2	8.6e-05	21.9	0.1	2.1	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
Dala_Dala_lig_C	PF07478.13	gi|84490007|ref|YP_448239.1|	-	9.5e-06	25.3	0.0	1.7e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.22	gi|84490007|ref|YP_448239.1|	-	1e-05	25.2	0.0	1.8e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|84490007|ref|YP_448239.1|	-	5.6e-05	23.0	0.0	0.0001	22.1	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATPgrasp_TupA	PF14305.6	gi|84490007|ref|YP_448239.1|	-	0.013	15.3	0.7	0.022	14.6	0.1	1.6	2	0	0	2	2	2	0	TupA-like	ATPgrasp
ATP-grasp_4	PF13535.6	gi|84490007|ref|YP_448239.1|	-	0.018	14.6	0.4	0.17	11.5	0.2	2.6	2	1	1	3	3	3	0	ATP-grasp	domain
HycI	PF01750.18	gi|84490008|ref|YP_448240.1|	-	1.4e-15	57.2	0.7	1.6e-15	57.0	0.7	1.0	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
DUF2666	PF10869.8	gi|84490008|ref|YP_448240.1|	-	0.0003	21.0	0.6	0.00039	20.6	0.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2666)
Methyltransf_31	PF13847.6	gi|84490009|ref|YP_448241.1|	-	6.5e-09	35.8	0.1	8.5e-09	35.4	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|84490009|ref|YP_448241.1|	-	1.1e-08	35.6	0.0	2e-08	34.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|84490009|ref|YP_448241.1|	-	8.7e-08	31.5	0.1	1.1e-07	31.1	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
PrmA	PF06325.13	gi|84490009|ref|YP_448241.1|	-	8.9e-08	31.9	0.1	1.4e-07	31.2	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.12	gi|84490009|ref|YP_448241.1|	-	1.8e-06	28.5	0.0	3e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PRMT5	PF05185.16	gi|84490009|ref|YP_448241.1|	-	4.5e-06	26.6	0.0	9.3e-06	25.6	0.0	1.6	1	0	0	1	1	1	1	PRMT5	arginine-N-methyltransferase
MTS	PF05175.14	gi|84490009|ref|YP_448241.1|	-	5.8e-05	22.7	0.0	0.00011	21.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_12	PF08242.12	gi|84490009|ref|YP_448241.1|	-	0.00069	20.3	0.0	0.0011	19.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
NodS	PF05401.11	gi|84490009|ref|YP_448241.1|	-	0.008	15.8	0.0	0.011	15.4	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_23	PF13489.6	gi|84490009|ref|YP_448241.1|	-	0.017	15.0	0.0	0.021	14.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|84490009|ref|YP_448241.1|	-	0.019	14.9	0.1	0.043	13.8	0.1	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Hen1_Lam_C	PF18441.1	gi|84490009|ref|YP_448241.1|	-	0.023	14.5	0.4	0.065	13.1	0.2	1.8	1	1	0	1	1	1	0	Hen1	La-motif	C-terminal	domain
Methyltransf_15	PF09445.10	gi|84490009|ref|YP_448241.1|	-	0.044	13.4	2.8	0.098	12.2	0.1	2.2	1	1	1	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
NikR_C	PF08753.11	gi|84490010|ref|YP_448242.1|	-	2.5e-31	107.7	5.3	3.4e-31	107.2	5.3	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.21	gi|84490010|ref|YP_448242.1|	-	0.00043	20.1	0.1	0.00097	19.0	0.1	1.6	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RuBisCO_large	PF00016.20	gi|84490010|ref|YP_448242.1|	-	0.013	14.7	0.4	0.016	14.4	0.4	1.1	1	0	0	1	1	1	0	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
IFNGR1	PF07140.11	gi|84490010|ref|YP_448242.1|	-	0.1	12.7	0.1	0.15	12.1	0.1	1.3	1	0	0	1	1	1	0	Interferon	gamma	receptor	(IFNGR1)
CBS	PF00571.28	gi|84490011|ref|YP_448243.1|	-	1.7e-24	86.0	0.5	5e-11	42.9	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
TrkA_N	PF02254.18	gi|84490012|ref|YP_448244.1|	-	2.9e-26	92.0	1.2	3.5e-26	91.7	0.3	1.6	2	0	0	2	2	2	1	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|84490012|ref|YP_448244.1|	-	3.5e-06	27.4	0.4	3.7e-05	24.1	0.1	2.1	1	1	1	2	2	2	1	Putative	NAD(P)-binding
TrkA_C	PF02080.21	gi|84490012|ref|YP_448244.1|	-	7.6e-06	25.7	0.1	1.4e-05	24.9	0.1	1.5	1	0	0	1	1	1	1	TrkA-C	domain
F420_oxidored	PF03807.17	gi|84490012|ref|YP_448244.1|	-	0.0023	18.5	0.2	0.013	16.1	0.0	2.2	1	1	2	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|84490012|ref|YP_448244.1|	-	0.0029	17.9	0.1	0.0067	16.7	0.1	1.7	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
Gp_dh_N	PF00044.24	gi|84490012|ref|YP_448244.1|	-	0.0051	17.1	0.1	0.014	15.7	0.1	1.7	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DAO	PF01266.24	gi|84490012|ref|YP_448244.1|	-	0.014	15.0	0.0	0.039	13.5	0.0	1.7	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
ApbA	PF02558.16	gi|84490012|ref|YP_448244.1|	-	0.031	13.9	0.1	0.049	13.3	0.1	1.5	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.14	gi|84490012|ref|YP_448244.1|	-	0.035	13.4	0.0	0.057	12.7	0.0	1.4	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.20	gi|84490012|ref|YP_448244.1|	-	0.079	13.0	0.7	16	5.5	0.1	2.6	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.27	gi|84490012|ref|YP_448244.1|	-	0.12	12.9	0.1	1.6	9.3	0.0	2.6	3	0	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
VWA_CoxE	PF05762.14	gi|84490013|ref|YP_448245.1|	-	4.5e-35	121.1	0.0	6.7e-35	120.5	0.0	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
Tail_spike_N	PF18668.1	gi|84490013|ref|YP_448245.1|	-	0.086	12.7	0.1	0.22	11.4	0.1	1.7	1	0	0	1	1	1	0	Tail	spike	TSP1/Gp66	receptor	binding	N-terminal	domain
DUF4834	PF16118.5	gi|84490013|ref|YP_448245.1|	-	4.5	8.3	8.9	17	6.5	5.5	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4834)
VWA_CoxE	PF05762.14	gi|84490014|ref|YP_448246.1|	-	6.3e-34	117.3	0.0	8.9e-34	116.8	0.0	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
A1_Propeptide	PF07966.12	gi|84490014|ref|YP_448246.1|	-	0.0091	15.8	1.0	9.2	6.2	0.0	3.8	3	0	0	3	3	3	2	A1	Propeptide
GATase_3	PF07685.14	gi|84490015|ref|YP_448247.1|	-	2.2e-53	180.8	0.1	3.9e-53	180.0	0.1	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.6	gi|84490015|ref|YP_448247.1|	-	3.2e-23	82.6	0.4	4.1e-22	79.0	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|84490015|ref|YP_448247.1|	-	5.9e-21	74.9	0.0	9.6e-21	74.2	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SNO	PF01174.19	gi|84490015|ref|YP_448247.1|	-	2.5e-06	27.4	0.0	4.9e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase	PF00117.28	gi|84490015|ref|YP_448247.1|	-	0.00015	21.6	0.0	0.00037	20.3	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
MobB	PF03205.14	gi|84490015|ref|YP_448247.1|	-	0.0036	17.2	0.6	0.091	12.7	0.0	2.8	3	1	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DJ-1_PfpI	PF01965.24	gi|84490015|ref|YP_448247.1|	-	0.006	16.4	0.0	0.019	14.7	0.0	1.8	2	0	0	2	2	2	1	DJ-1/PfpI	family
RELT	PF12606.8	gi|84490015|ref|YP_448247.1|	-	0.0066	15.4	0.0	0.014	14.4	0.0	1.4	1	0	0	1	1	1	1	Tumour	necrosis	factor	receptor	superfamily	member	19
DUF1611	PF07755.11	gi|84490015|ref|YP_448247.1|	-	0.017	14.4	0.1	2.2	7.5	0.0	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
CTP_synth_N	PF06418.14	gi|84490015|ref|YP_448247.1|	-	0.045	13.1	0.0	0.088	12.1	0.0	1.5	1	0	0	1	1	1	0	CTP	synthase	N-terminus
SRP54	PF00448.22	gi|84490015|ref|YP_448247.1|	-	0.052	13.2	1.5	11	5.5	0.1	2.9	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
Peptidase_C26	PF07722.13	gi|84490015|ref|YP_448247.1|	-	0.068	12.9	0.3	0.3	10.8	0.1	2.2	2	1	0	2	2	2	0	Peptidase	C26
VirC1	PF07015.11	gi|84490015|ref|YP_448247.1|	-	0.21	10.9	0.2	0.48	9.7	0.0	1.6	2	0	0	2	2	2	0	VirC1	protein
Lon_C	PF05362.13	gi|84490016|ref|YP_448248.1|	-	1.2e-31	109.8	2.3	2.2e-31	109.0	2.3	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_32	PF13654.6	gi|84490016|ref|YP_448248.1|	-	1.5e-29	103.2	0.1	3.1e-21	75.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|84490016|ref|YP_448248.1|	-	7.5e-18	64.8	0.1	3.9e-09	36.4	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|84490016|ref|YP_448248.1|	-	4.3e-15	55.7	0.0	6.8e-10	38.7	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.14	gi|84490016|ref|YP_448248.1|	-	3.3e-09	36.9	0.0	0.00044	20.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.23	gi|84490016|ref|YP_448248.1|	-	9.8e-09	34.6	0.1	0.0023	17.1	0.0	2.3	2	0	0	2	2	2	2	MCM	P-loop	domain
ChlI	PF13541.6	gi|84490016|ref|YP_448248.1|	-	1.6e-08	34.4	0.5	3.8e-08	33.2	0.5	1.7	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
Sigma54_activ_2	PF14532.6	gi|84490016|ref|YP_448248.1|	-	2.6e-08	34.1	0.0	0.0017	18.4	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA	PF00004.29	gi|84490016|ref|YP_448248.1|	-	2.7e-07	31.0	0.0	0.001	19.5	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|84490016|ref|YP_448248.1|	-	9.9e-06	25.4	0.1	0.042	13.6	0.0	2.6	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_3	PF07726.11	gi|84490016|ref|YP_448248.1|	-	4.5e-05	23.3	0.0	0.045	13.6	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|84490016|ref|YP_448248.1|	-	0.00013	22.2	0.0	0.0026	18.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|84490016|ref|YP_448248.1|	-	0.00036	20.1	0.0	0.0011	18.5	0.0	1.8	2	1	0	2	2	1	1	P-loop	containing	dynein	motor	region
AAA_16	PF13191.6	gi|84490016|ref|YP_448248.1|	-	0.00046	20.6	0.0	0.0013	19.1	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_30	PF13604.6	gi|84490016|ref|YP_448248.1|	-	0.00049	19.9	0.0	0.39	10.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TniB	PF05621.11	gi|84490016|ref|YP_448248.1|	-	0.00099	18.6	0.4	0.015	14.7	0.0	2.7	2	1	1	3	3	3	1	Bacterial	TniB	protein
IstB_IS21	PF01695.17	gi|84490016|ref|YP_448248.1|	-	0.0012	18.6	0.0	0.0098	15.6	0.0	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
NTPase_1	PF03266.15	gi|84490016|ref|YP_448248.1|	-	0.0013	18.6	0.0	0.89	9.4	0.0	3.0	3	0	0	3	3	2	1	NTPase
AAA_19	PF13245.6	gi|84490016|ref|YP_448248.1|	-	0.0024	18.2	0.5	0.014	15.8	0.5	2.2	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|84490016|ref|YP_448248.1|	-	0.0071	16.9	0.1	0.047	14.2	0.0	2.3	2	0	0	2	2	2	1	ABC	transporter
AAA_PrkA	PF08298.11	gi|84490016|ref|YP_448248.1|	-	0.0078	15.2	0.3	0.21	10.4	0.1	2.3	2	0	0	2	2	2	1	PrkA	AAA	domain
AAA_29	PF13555.6	gi|84490016|ref|YP_448248.1|	-	0.018	14.8	0.0	0.058	13.1	0.0	1.8	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Parvo_NS1	PF01057.17	gi|84490016|ref|YP_448248.1|	-	0.02	14.0	0.0	0.037	13.1	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_lid_3	PF17862.1	gi|84490016|ref|YP_448248.1|	-	0.026	14.4	0.7	0.064	13.1	0.1	2.0	2	0	0	2	2	2	0	AAA+	lid	domain
AAA_2	PF07724.14	gi|84490016|ref|YP_448248.1|	-	0.035	14.2	0.0	12	6.0	0.0	2.8	2	0	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
DUF815	PF05673.13	gi|84490016|ref|YP_448248.1|	-	0.044	12.9	0.0	0.087	12.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
ResIII	PF04851.15	gi|84490016|ref|YP_448248.1|	-	0.046	13.7	0.7	0.22	11.5	0.1	2.4	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_24	PF13479.6	gi|84490016|ref|YP_448248.1|	-	0.046	13.4	0.0	0.14	11.9	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
NACHT	PF05729.12	gi|84490016|ref|YP_448248.1|	-	0.087	12.7	0.0	0.19	11.6	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_10	PF12846.7	gi|84490016|ref|YP_448248.1|	-	0.096	11.6	0.8	0.15	10.9	0.0	1.7	2	0	0	2	2	2	0	AAA-like	domain
DEAD	PF00270.29	gi|84490017|ref|YP_448249.1|	-	1.1e-49	168.6	0.1	2.8e-49	167.3	0.0	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|84490017|ref|YP_448249.1|	-	2.1e-31	108.6	0.0	7.6e-29	100.3	0.0	2.6	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DbpA	PF03880.15	gi|84490017|ref|YP_448249.1|	-	5.3e-19	68.0	1.1	1.9e-18	66.2	0.1	2.5	3	0	0	3	3	3	1	DbpA	RNA	binding	domain
CMS1	PF14617.6	gi|84490017|ref|YP_448249.1|	-	0.0022	17.4	0.1	0.0022	17.4	0.1	2.6	3	0	0	3	3	3	1	U3-containing	90S	pre-ribosomal	complex	subunit
Flavi_DEAD	PF07652.14	gi|84490017|ref|YP_448249.1|	-	0.084	12.8	0.0	0.58	10.1	0.0	2.3	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
Pribosyltran_N	PF13793.6	gi|84490018|ref|YP_448250.1|	-	8e-32	109.6	1.4	2.4e-29	101.6	0.1	2.3	2	1	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|84490018|ref|YP_448250.1|	-	1.9e-20	73.0	1.7	5e-20	71.6	1.1	1.9	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|84490018|ref|YP_448250.1|	-	2.7e-09	37.3	3.1	5e-09	36.5	3.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|84490018|ref|YP_448250.1|	-	1.8e-06	27.6	2.7	3.8e-06	26.5	1.6	2.0	1	1	1	2	2	2	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|84490018|ref|YP_448250.1|	-	0.00019	21.0	0.3	0.00037	20.0	0.3	1.6	1	0	0	1	1	1	1	Phosphoribosyl	transferase
HypA	PF01155.19	gi|84490019|ref|YP_448251.1|	-	1.1e-28	99.5	3.1	1.3e-28	99.3	3.1	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Cytomega_gL	PF01801.16	gi|84490019|ref|YP_448251.1|	-	0.0039	16.6	0.1	0.006	16.0	0.1	1.3	1	0	0	1	1	1	1	Cytomegalovirus	glycoprotein	L
DnaJ_CXXCXGXG	PF00684.19	gi|84490019|ref|YP_448251.1|	-	0.025	14.9	1.2	0.041	14.3	1.2	1.2	1	0	0	1	1	1	0	DnaJ	central	domain
Zn-ribbon_8	PF09723.10	gi|84490019|ref|YP_448251.1|	-	0.35	11.0	2.9	0.98	9.6	2.9	1.8	1	1	0	1	1	1	0	Zinc	ribbon	domain
UPF0547	PF10571.9	gi|84490019|ref|YP_448251.1|	-	3.3	7.9	5.8	9.4	6.4	1.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
cobW	PF02492.19	gi|84490020|ref|YP_448252.1|	-	3.7e-27	95.0	1.0	5e-27	94.6	1.0	1.2	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MeaB	PF03308.16	gi|84490020|ref|YP_448252.1|	-	6.4e-06	25.3	0.4	0.0012	17.9	0.3	2.1	2	0	0	2	2	2	2	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
RsgA_GTPase	PF03193.16	gi|84490020|ref|YP_448252.1|	-	2.8e-05	24.1	0.1	0.13	12.2	0.0	2.2	2	0	0	2	2	2	2	RsgA	GTPase
KAP_NTPase	PF07693.14	gi|84490020|ref|YP_448252.1|	-	0.0027	17.0	0.0	0.0027	17.0	0.0	1.1	1	0	0	1	1	1	1	KAP	family	P-loop	domain
ABC_tran	PF00005.27	gi|84490020|ref|YP_448252.1|	-	0.0035	17.9	0.0	0.0054	17.3	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
GTP_EFTU	PF00009.27	gi|84490020|ref|YP_448252.1|	-	0.0079	15.8	0.6	2.4	7.7	0.1	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Zeta_toxin	PF06414.12	gi|84490020|ref|YP_448252.1|	-	0.022	14.1	0.0	0.03	13.6	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
MobB	PF03205.14	gi|84490020|ref|YP_448252.1|	-	0.024	14.5	0.0	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arf	PF00025.21	gi|84490020|ref|YP_448252.1|	-	0.028	13.9	0.1	0.46	9.9	0.0	2.2	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
TrwB_AAD_bind	PF10412.9	gi|84490020|ref|YP_448252.1|	-	0.051	12.5	0.0	0.075	11.9	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_21	PF13304.6	gi|84490020|ref|YP_448252.1|	-	0.052	13.3	0.1	0.081	12.7	0.1	1.3	1	0	0	1	1	1	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Roc	PF08477.13	gi|84490020|ref|YP_448252.1|	-	0.06	13.6	0.0	0.48	10.7	0.0	2.0	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Pox_A32	PF04665.12	gi|84490020|ref|YP_448252.1|	-	0.069	12.6	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	Poxvirus	A32	protein
AAA_16	PF13191.6	gi|84490020|ref|YP_448252.1|	-	0.087	13.2	0.0	0.13	12.6	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
TsaE	PF02367.17	gi|84490020|ref|YP_448252.1|	-	0.11	12.6	0.0	0.18	11.8	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_22	PF13401.6	gi|84490020|ref|YP_448252.1|	-	0.16	12.2	0.0	0.41	10.9	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
DUF354	PF04007.12	gi|84490021|ref|YP_448253.1|	-	9e-145	482.0	7.7	1e-144	481.8	7.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF354)
LpxB	PF02684.15	gi|84490021|ref|YP_448253.1|	-	0.0085	15.0	0.1	0.022	13.6	0.1	1.7	2	0	0	2	2	2	1	Lipid-A-disaccharide	synthetase
Epimerase_2	PF02350.19	gi|84490021|ref|YP_448253.1|	-	0.014	14.3	0.0	0.017	14.0	0.0	1.2	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
Glyco_transf_4	PF13439.6	gi|84490021|ref|YP_448253.1|	-	0.2	11.6	0.2	0.43	10.5	0.0	1.6	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
DUF1043	PF06295.12	gi|84490022|ref|YP_448254.1|	-	0.13	12.2	0.9	0.78	9.7	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1043)
Nitroreductase	PF00881.24	gi|84490023|ref|YP_448255.1|	-	2.8e-22	79.6	0.0	4e-22	79.1	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
Fer4	PF00037.27	gi|84490023|ref|YP_448255.1|	-	9.4e-09	34.7	13.8	0.00012	21.7	2.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84490023|ref|YP_448255.1|	-	1.2e-08	35.4	22.3	7.1e-07	29.7	11.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490023|ref|YP_448255.1|	-	2.8e-07	31.4	8.7	0.00038	21.3	0.8	2.5	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|84490023|ref|YP_448255.1|	-	5.3e-07	29.7	11.1	9.5e-07	28.9	11.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84490023|ref|YP_448255.1|	-	1.7e-06	28.4	7.5	0.0012	19.3	0.5	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490023|ref|YP_448255.1|	-	3e-06	27.3	22.0	0.00043	20.3	1.6	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490023|ref|YP_448255.1|	-	3.1e-06	27.2	11.1	7.4e-06	26.0	11.1	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490023|ref|YP_448255.1|	-	1.8e-05	24.6	13.0	0.013	15.6	2.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|84490023|ref|YP_448255.1|	-	1.8e-05	25.5	4.6	0.073	13.9	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84490023|ref|YP_448255.1|	-	4.2e-05	24.0	5.7	0.028	15.0	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84490023|ref|YP_448255.1|	-	0.00027	21.2	16.4	0.01	16.3	3.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84490023|ref|YP_448255.1|	-	0.0014	18.6	12.7	0.083	13.0	3.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84490023|ref|YP_448255.1|	-	0.0052	17.3	9.6	0.024	15.2	0.7	2.4	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|84490023|ref|YP_448255.1|	-	0.012	15.8	1.1	0.012	15.8	1.1	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84490023|ref|YP_448255.1|	-	0.022	15.7	17.9	0.69	11.0	4.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
TM1586_NiRdase	PF14512.6	gi|84490023|ref|YP_448255.1|	-	0.027	14.0	0.4	1.2	8.7	0.0	2.5	2	1	1	3	3	3	0	Putative	TM	nitroreductase
RecG_N	PF17190.4	gi|84490023|ref|YP_448255.1|	-	0.036	14.8	0.7	1.8	9.4	0.2	2.5	2	0	0	2	2	2	0	RecG	N-terminal	helical	domain
Fer4_15	PF13459.6	gi|84490023|ref|YP_448255.1|	-	0.18	12.5	4.9	9.3	7.1	0.4	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
zf-C2H2_11	PF16622.5	gi|84490023|ref|YP_448255.1|	-	5.9	6.7	8.5	3.4	7.5	0.7	2.6	2	0	0	2	2	2	0	zinc-finger	C2H2-type
Meth_synt_2	PF01717.18	gi|84490024|ref|YP_448256.1|	-	4.2e-47	161.0	0.1	5.9e-47	160.5	0.1	1.1	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
URO-D	PF01208.17	gi|84490024|ref|YP_448256.1|	-	5.5e-06	25.8	0.1	8.6e-06	25.1	0.1	1.3	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Meth_synt_1	PF08267.12	gi|84490024|ref|YP_448256.1|	-	1.5e-05	24.6	0.0	2.2e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Thymidylat_synt	PF00303.19	gi|84490025|ref|YP_448257.1|	-	1.5e-14	53.8	0.9	4.3e-13	49.0	0.2	2.0	1	1	1	2	2	2	2	Thymidylate	synthase
MCH	PF02289.16	gi|84490026|ref|YP_448258.1|	-	6.9e-118	393.5	0.0	7.8e-118	393.3	0.0	1.0	1	0	0	1	1	1	1	Cyclohydrolase	(MCH)
PreAtp-grasp	PF18604.1	gi|84490026|ref|YP_448258.1|	-	0.12	12.0	0.0	0.27	10.9	0.0	1.6	1	0	0	1	1	1	0	Pre	ATP-grasp	domain
DMRL_synthase	PF00885.19	gi|84490027|ref|YP_448259.1|	-	3.3e-15	56.2	0.1	3.9e-15	55.9	0.1	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Nitro_FeMo-Co	PF02579.17	gi|84490027|ref|YP_448259.1|	-	0.071	13.5	0.0	0.14	12.5	0.0	1.4	1	0	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
MIP	PF00230.20	gi|84490028|ref|YP_448260.1|	-	2.3e-41	142.0	18.7	8.4e-41	140.1	18.7	1.7	1	1	0	1	1	1	1	Major	intrinsic	protein
DUF2613	PF11021.8	gi|84490028|ref|YP_448260.1|	-	1.8	8.7	8.2	11	6.2	1.0	3.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2613)
Seryl_tRNA_N	PF02403.22	gi|84490029|ref|YP_448261.1|	-	0.044	14.0	0.8	0.044	14.0	0.8	1.4	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
TFIIS_C	PF01096.18	gi|84490030|ref|YP_448262.1|	-	1.7e-14	53.4	5.3	1.7e-14	53.4	5.3	2.8	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|84490030|ref|YP_448262.1|	-	4.9e-05	23.1	2.8	4.9e-05	23.1	2.8	3.0	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
DZR	PF12773.7	gi|84490030|ref|YP_448262.1|	-	0.00035	20.5	6.5	0.035	14.1	0.4	2.5	2	1	0	2	2	2	2	Double	zinc	ribbon
DUF35_N	PF12172.8	gi|84490030|ref|YP_448262.1|	-	0.0051	16.7	8.6	1.1	9.2	0.6	3.2	3	0	0	3	3	3	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C2HC5	PF06221.13	gi|84490030|ref|YP_448262.1|	-	0.01	15.8	5.6	0.024	14.6	0.3	2.9	3	0	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
TackOD1	PF18551.1	gi|84490030|ref|YP_448262.1|	-	0.012	15.2	6.0	0.23	11.1	6.0	2.5	1	1	0	1	1	1	0	Thaumarchaeal	output	domain	1
zf-ribbon_3	PF13248.6	gi|84490030|ref|YP_448262.1|	-	0.016	14.6	1.5	0.016	14.6	1.5	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
DUF1179	PF06678.11	gi|84490030|ref|YP_448262.1|	-	0.028	14.4	0.1	0.038	14.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1179)
zf_UBZ	PF18439.1	gi|84490030|ref|YP_448262.1|	-	0.035	13.7	4.1	6.1	6.5	0.1	3.4	3	0	0	3	3	3	0	Ubiquitin-Binding	Zinc	Finger
NOB1_Zn_bind	PF08772.11	gi|84490030|ref|YP_448262.1|	-	0.049	13.8	13.3	0.28	11.4	0.7	3.7	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc_ribbon_2	PF13240.6	gi|84490030|ref|YP_448262.1|	-	0.095	12.5	0.4	0.095	12.5	0.4	3.7	4	0	0	4	4	4	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|84490030|ref|YP_448262.1|	-	0.1	12.6	12.3	1.3	9.1	1.3	2.5	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|84490030|ref|YP_448262.1|	-	0.15	12.0	0.4	0.15	12.0	0.4	3.6	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|84490030|ref|YP_448262.1|	-	0.18	11.5	0.2	0.18	11.5	0.2	2.9	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Med16	PF11635.8	gi|84490030|ref|YP_448262.1|	-	0.19	9.6	4.6	0.18	9.7	4.6	1.0	1	0	0	1	1	1	0	Mediator	complex	subunit	16
OrfB_Zn_ribbon	PF07282.11	gi|84490030|ref|YP_448262.1|	-	0.3	11.0	10.1	2	8.4	3.1	2.5	2	1	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Desulfoferrod_N	PF06397.12	gi|84490030|ref|YP_448262.1|	-	0.33	10.6	0.1	0.33	10.6	0.1	2.9	3	0	0	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
zinc-ribbons_6	PF07191.12	gi|84490030|ref|YP_448262.1|	-	0.39	10.7	7.4	0.53	10.3	0.6	2.6	2	1	1	3	3	3	0	zinc-ribbons
zf-RRPl_C4	PF17026.5	gi|84490030|ref|YP_448262.1|	-	0.4	10.8	5.4	0.69	10.0	5.4	1.4	1	1	0	1	1	1	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
TF_Zn_Ribbon	PF08271.12	gi|84490030|ref|YP_448262.1|	-	0.47	10.0	11.1	0.5	9.9	0.9	2.9	2	2	0	2	2	2	0	TFIIB	zinc-binding
Rpr2	PF04032.16	gi|84490030|ref|YP_448262.1|	-	1.6	9.1	6.6	30	5.0	6.6	2.6	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Ribosomal_L32p	PF01783.23	gi|84490030|ref|YP_448262.1|	-	1.7	9.0	5.6	1	9.7	0.8	2.5	3	0	0	3	3	3	0	Ribosomal	L32p	protein	family
Zn-ribbon_8	PF09723.10	gi|84490030|ref|YP_448262.1|	-	1.8	8.8	11.0	4	7.6	0.4	3.5	3	1	0	4	4	4	0	Zinc	ribbon	domain
HypA	PF01155.19	gi|84490030|ref|YP_448262.1|	-	3.9	7.5	6.6	12	6.0	1.7	2.7	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-CCHC_5	PF14787.6	gi|84490030|ref|YP_448262.1|	-	4.7	7.0	9.9	5.2	6.9	0.9	3.1	3	0	0	3	3	3	0	GAG-polyprotein	viral	zinc-finger
Ribosomal_L15e	PF00827.17	gi|84490031|ref|YP_448263.1|	-	5.1e-84	280.8	11.5	5.6e-84	280.6	11.5	1.0	1	0	0	1	1	1	1	Ribosomal	L15
RNA_binding	PF01877.17	gi|84490032|ref|YP_448264.1|	-	2.1e-35	121.6	2.2	2.7e-35	121.2	2.2	1.1	1	0	0	1	1	1	1	RNA	binding
Baculo_VP91_N	PF08475.10	gi|84490032|ref|YP_448264.1|	-	0.078	12.7	0.8	0.095	12.4	0.8	1.1	1	0	0	1	1	1	0	Viral	capsid	protein	91	N-terminal
RNase_P_p30	PF01876.16	gi|84490033|ref|YP_448265.1|	-	4.8e-46	156.9	1.2	5.8e-46	156.7	1.2	1.0	1	0	0	1	1	1	1	RNase	P	subunit	p30
Aminotran_4	PF01063.19	gi|84490033|ref|YP_448265.1|	-	0.045	13.6	0.0	0.086	12.7	0.0	1.4	1	0	0	1	1	1	0	Amino-transferase	class	IV
RNase_P_Rpp14	PF01900.19	gi|84490034|ref|YP_448266.1|	-	3.9e-19	68.8	0.7	4.5e-19	68.6	0.7	1.0	1	0	0	1	1	1	1	Rpp14/Pop5	family
Lyase_1	PF00206.20	gi|84490035|ref|YP_448267.1|	-	5.2e-53	180.5	1.6	7.9e-53	179.9	1.6	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|84490035|ref|YP_448267.1|	-	4.6e-21	75.1	2.2	8e-21	74.4	0.1	2.5	3	1	0	3	3	3	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.11	gi|84490035|ref|YP_448267.1|	-	0.00025	21.1	0.1	0.00025	21.1	0.1	2.2	3	0	0	3	3	3	1	Adenylosuccinate	lyase	C-terminal
Proteasome	PF00227.26	gi|84490036|ref|YP_448268.1|	-	6.7e-57	192.0	0.3	1.3e-56	191.1	0.3	1.5	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|84490036|ref|YP_448268.1|	-	7.2e-14	51.2	0.1	1.6e-13	50.1	0.1	1.6	1	0	0	1	1	1	1	Proteasome	subunit	A	N-terminal	signature
PRTP	PF01366.18	gi|84490036|ref|YP_448268.1|	-	1	7.3	5.6	0.59	8.1	4.2	1.3	2	0	0	2	2	2	0	Herpesvirus	processing	and	transport	protein
ISG65-75	PF11727.8	gi|84490036|ref|YP_448268.1|	-	1.1	8.4	16.9	1.7	7.8	16.9	1.3	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
NARP1	PF12569.8	gi|84490036|ref|YP_448268.1|	-	1.4	7.8	15.2	1.7	7.5	15.2	1.1	1	0	0	1	1	1	0	NMDA	receptor-regulated	protein	1
U79_P34	PF03064.16	gi|84490036|ref|YP_448268.1|	-	3.8	6.8	12.5	29	3.9	14.4	1.6	2	0	0	2	2	2	0	HSV	U79	/	HCMV	P34
SBDS	PF01172.18	gi|84490037|ref|YP_448269.1|	-	3.3e-23	81.6	1.1	6.3e-23	80.7	1.1	1.5	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|84490037|ref|YP_448269.1|	-	3.8e-18	65.6	0.3	3.8e-18	65.6	0.3	1.8	2	0	0	2	2	2	1	SBDS	protein	C-terminal	domain
RraB	PF06877.11	gi|84490037|ref|YP_448269.1|	-	0.12	13.1	3.8	0.3	11.8	3.6	1.8	1	1	0	1	1	1	0	Regulator	of	ribonuclease	activity	B
YicC_N	PF03755.13	gi|84490037|ref|YP_448269.1|	-	0.28	11.6	4.6	5.4	7.5	0.3	2.3	1	1	1	2	2	2	0	YicC-like	family,	N-terminal	region
ECR1_N	PF14382.6	gi|84490038|ref|YP_448270.1|	-	1.5e-08	34.3	0.0	2.9e-08	33.4	0.0	1.4	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
KH_6	PF15985.5	gi|84490038|ref|YP_448270.1|	-	0.00077	19.8	0.0	0.0015	18.8	0.0	1.5	1	0	0	1	1	1	1	KH	domain
BNR_2	PF13088.6	gi|84490038|ref|YP_448270.1|	-	0.033	13.5	0.0	0.036	13.4	0.0	1.1	1	0	0	1	1	1	0	BNR	repeat-like	domain
RNase_PH	PF01138.21	gi|84490039|ref|YP_448271.1|	-	1.9e-34	119.0	0.0	2.5e-34	118.6	0.0	1.1	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|84490039|ref|YP_448271.1|	-	1.2e-17	63.7	0.0	4.1e-17	62.0	0.1	1.9	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.21	gi|84490040|ref|YP_448272.1|	-	3.4e-27	95.5	0.0	5.4e-27	94.9	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|84490040|ref|YP_448272.1|	-	3.2e-11	43.1	1.3	5.2e-11	42.4	0.2	2.0	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
Ribosomal_L37ae	PF01780.19	gi|84490041|ref|YP_448273.1|	-	1e-33	115.2	6.4	1.1e-33	115.1	6.4	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.7	gi|84490041|ref|YP_448273.1|	-	0.0023	17.9	3.0	0.0035	17.3	3.0	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|84490041|ref|YP_448273.1|	-	0.0066	16.5	0.6	3	8.0	0.2	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|84490041|ref|YP_448273.1|	-	0.011	15.5	0.1	0.017	14.8	0.1	1.3	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|84490041|ref|YP_448273.1|	-	0.012	15.1	0.4	0.44	10.1	0.0	2.1	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn_ribbon_SprT	PF17283.2	gi|84490041|ref|YP_448273.1|	-	0.023	14.6	4.4	0.057	13.3	4.1	1.8	1	1	1	2	2	2	0	SprT-like	zinc	ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|84490041|ref|YP_448273.1|	-	0.026	14.4	1.6	0.57	10.1	0.1	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
OrfB_Zn_ribbon	PF07282.11	gi|84490041|ref|YP_448273.1|	-	0.032	14.2	1.0	0.051	13.5	1.0	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Rep_fac-A_C	PF08646.10	gi|84490041|ref|YP_448273.1|	-	0.032	14.0	0.8	0.038	13.7	0.8	1.1	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
HalOD2	PF18547.1	gi|84490041|ref|YP_448273.1|	-	0.034	14.1	2.9	0.048	13.6	2.2	1.6	1	1	0	1	1	1	0	Halobacterial	output	domain	2
DUF3268	PF11672.8	gi|84490041|ref|YP_448273.1|	-	0.037	14.4	2.1	0.32	11.3	0.1	2.2	1	1	1	2	2	2	0	zinc-finger-containing	domain
zf-3CxxC_2	PF17180.4	gi|84490041|ref|YP_448273.1|	-	0.054	14.2	1.4	1.5	9.6	0.2	2.1	2	0	0	2	2	2	0	Zinc-binding	domain
Elf1	PF05129.13	gi|84490041|ref|YP_448273.1|	-	0.22	11.6	3.4	0.42	10.7	3.4	1.5	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
zinc_ribbon_4	PF13717.6	gi|84490041|ref|YP_448273.1|	-	0.23	11.4	4.1	1.1	9.2	0.6	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2	PF00096.26	gi|84490041|ref|YP_448273.1|	-	0.47	11.0	4.2	12	6.6	0.4	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Mut7-C	PF01927.16	gi|84490041|ref|YP_448273.1|	-	0.64	10.1	3.2	2.5	8.2	2.9	1.8	1	1	1	2	2	2	0	Mut7-C	RNAse	domain
zf-ACC	PF17848.1	gi|84490041|ref|YP_448273.1|	-	0.85	9.8	8.0	13	6.0	0.1	2.5	2	1	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
DUF35_N	PF12172.8	gi|84490041|ref|YP_448273.1|	-	1.8	8.5	6.3	7.6	6.5	0.6	2.3	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-tcix	PF14952.6	gi|84490041|ref|YP_448273.1|	-	9.4	6.0	9.6	0.25	11.0	0.7	2.5	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DNA_RNApol_7kD	PF03604.13	gi|297616208|ref|YP_003710348.1|	-	2.2e-06	27.2	7.0	3e-06	26.8	7.0	1.2	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_2	PF13240.6	gi|297616208|ref|YP_003710348.1|	-	0.0015	18.2	3.6	0.0056	16.4	3.6	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-C2HC5	PF06221.13	gi|297616208|ref|YP_003710348.1|	-	0.0022	17.9	0.3	0.0024	17.8	0.3	1.1	1	0	0	1	1	1	1	Putative	zinc	finger	motif,	C2HC5-type
Desulfoferrod_N	PF06397.12	gi|297616208|ref|YP_003710348.1|	-	0.0095	15.5	0.4	0.0095	15.5	0.4	1.7	2	0	0	2	2	2	1	Desulfoferrodoxin,	N-terminal	domain
HypA	PF01155.19	gi|297616208|ref|YP_003710348.1|	-	0.0097	15.9	0.5	0.0097	15.9	0.5	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
RNHCP	PF12647.7	gi|297616208|ref|YP_003710348.1|	-	0.013	15.5	0.3	0.013	15.5	0.3	1.1	1	0	0	1	1	1	0	RNHCP	domain
Rhodanese_C	PF12368.8	gi|297616208|ref|YP_003710348.1|	-	0.016	15.5	0.6	0.017	15.5	0.6	1.1	1	0	0	1	1	1	0	Rhodanase	C-terminal
DZR	PF12773.7	gi|297616208|ref|YP_003710348.1|	-	0.026	14.5	1.3	0.038	14.0	1.3	1.3	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.10	gi|297616208|ref|YP_003710348.1|	-	0.042	14.0	2.3	0.062	13.4	2.3	1.3	1	0	0	1	1	1	0	Zinc	ribbon	domain
C1_1	PF00130.22	gi|297616208|ref|YP_003710348.1|	-	0.072	13.0	1.9	0.21	11.5	2.0	1.6	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-H2C2_2	PF13465.6	gi|297616208|ref|YP_003710348.1|	-	0.073	13.5	3.4	3.1	8.4	0.4	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-C2H2_4	PF13894.6	gi|297616208|ref|YP_003710348.1|	-	0.097	13.6	3.5	5.4	8.1	0.2	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C3HC4_3	PF13920.6	gi|297616208|ref|YP_003710348.1|	-	0.11	12.4	3.2	0.21	11.5	3.2	1.5	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-Di19	PF05605.12	gi|297616208|ref|YP_003710348.1|	-	0.14	12.5	3.8	3	8.2	1.0	2.1	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
A2L_zn_ribbon	PF08792.10	gi|297616208|ref|YP_003710348.1|	-	0.15	11.9	4.2	0.43	10.4	4.5	1.6	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
DiS_P_DiS	PF06750.13	gi|297616208|ref|YP_003710348.1|	-	0.19	11.9	1.7	1.7	8.8	0.1	2.0	1	1	1	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
zf-ribbon_3	PF13248.6	gi|297616208|ref|YP_003710348.1|	-	0.28	10.7	5.4	2.8	7.5	5.4	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
PyrI_C	PF02748.15	gi|297616208|ref|YP_003710348.1|	-	0.5	10.3	6.2	5.7	6.9	0.6	2.1	1	1	1	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Cys_rich_CPXG	PF14255.6	gi|297616208|ref|YP_003710348.1|	-	0.5	10.3	5.8	2.4	8.1	0.2	2.1	1	1	1	2	2	2	0	Cysteine-rich	CPXCG
Thioredoxin_4	PF13462.6	gi|297616208|ref|YP_003710348.1|	-	1.5	8.9	3.7	2	8.5	3.7	1.4	1	1	0	1	1	1	0	Thioredoxin
Fibroin_P25	PF07294.11	gi|84490042|ref|YP_448274.1|	-	0.00093	19.3	0.7	0.85	9.6	0.1	2.1	2	0	0	2	2	2	2	Fibroin	P25
Pcc1	PF09341.10	gi|84490043|ref|YP_448275.1|	-	2e-14	53.4	0.1	2.3e-14	53.3	0.1	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF5611	PF18446.1	gi|84490043|ref|YP_448275.1|	-	0.069	14.0	0.1	0.08	13.8	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5611)
Prefoldin_2	PF01920.20	gi|84490044|ref|YP_448276.1|	-	4.5e-24	84.4	20.7	5.1e-24	84.3	20.7	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
TPR_MLP1_2	PF07926.12	gi|84490044|ref|YP_448276.1|	-	0.19	11.8	18.4	1.3	9.0	4.8	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
Rogdi_lz	PF10259.9	gi|84490044|ref|YP_448276.1|	-	0.26	10.7	8.8	0.31	10.4	0.5	2.0	1	1	1	2	2	2	0	Rogdi	leucine	zipper	containing	protein
eIF3_N	PF09440.10	gi|84490044|ref|YP_448276.1|	-	0.47	10.9	13.4	0.05	14.0	5.8	2.0	1	1	1	2	2	2	0	eIF3	subunit	6	N	terminal	domain
Prefoldin	PF02996.17	gi|84490044|ref|YP_448276.1|	-	0.53	10.2	19.6	0.056	13.4	6.4	2.6	2	1	0	2	2	2	0	Prefoldin	subunit
IFT57	PF10498.9	gi|84490044|ref|YP_448276.1|	-	0.82	8.6	18.1	0.18	10.7	3.7	2.0	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
FliD_C	PF07195.12	gi|84490044|ref|YP_448276.1|	-	1.2	8.4	15.2	0.12	11.7	5.4	1.9	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Nup54	PF13874.6	gi|84490044|ref|YP_448276.1|	-	1.3	9.1	12.0	0.72	9.9	1.7	2.1	2	0	0	2	2	2	0	Nucleoporin	complex	subunit	54
GvpG	PF05120.12	gi|84490044|ref|YP_448276.1|	-	1.5	8.9	12.0	0.08	13.0	2.0	2.3	2	0	0	2	2	2	0	Gas	vesicle	protein	G
GTP-bdg_M	PF16360.5	gi|84490044|ref|YP_448276.1|	-	1.9	9.1	9.3	1.4	9.5	2.0	2.5	2	1	1	3	3	3	0	GTP-binding	GTPase	Middle	Region
Ax_dynein_light	PF10211.9	gi|84490044|ref|YP_448276.1|	-	4.2	7.3	17.6	3.3	7.6	2.9	2.0	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
Com_YlbF	PF06133.11	gi|84490044|ref|YP_448276.1|	-	4.5	7.9	22.1	0.32	11.6	7.4	2.1	2	0	0	2	2	2	0	Control	of	competence	regulator	ComK,	YlbF/YmcA
FlaC_arch	PF05377.11	gi|84490044|ref|YP_448276.1|	-	5.3	7.5	12.4	3	8.3	3.6	2.6	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
BST2	PF16716.5	gi|84490044|ref|YP_448276.1|	-	5.3	7.7	19.9	0.51	11.0	6.7	2.2	2	0	0	2	2	2	0	Bone	marrow	stromal	antigen	2
DUF1664	PF07889.12	gi|84490044|ref|YP_448276.1|	-	5.8	7.0	14.7	6	6.9	3.7	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
HisKA_3	PF07730.13	gi|84490044|ref|YP_448276.1|	-	5.8	7.5	8.7	2.7	8.6	0.7	2.6	2	1	1	3	3	3	0	Histidine	kinase
Cdh1_DBD_1	PF18196.1	gi|84490044|ref|YP_448276.1|	-	8.4	6.7	12.1	2.4	8.5	3.9	2.1	1	1	1	2	2	2	0	Chromodomain	helicase	DNA-binding	domain	1
His_biosynth	PF00977.21	gi|84490045|ref|YP_448277.1|	-	4.4e-37	127.7	1.0	5e-37	127.6	1.0	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|84490045|ref|YP_448277.1|	-	0.0038	16.4	0.1	0.098	11.8	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
QRPTase_C	PF01729.19	gi|84490045|ref|YP_448277.1|	-	0.011	15.5	0.1	0.021	14.6	0.1	1.5	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PfkB	PF00294.24	gi|84490046|ref|YP_448278.1|	-	1.2e-13	51.0	0.0	2e-13	50.4	0.0	1.4	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
ESP	PF16590.5	gi|84490046|ref|YP_448278.1|	-	0.69	10.2	4.5	0.78	10.0	1.8	2.4	2	1	0	2	2	2	0	Exocrine	gland-secreting	peptide
DUF4896	PF16237.5	gi|84490047|ref|YP_448279.1|	-	0.0099	15.7	4.1	0.013	15.3	4.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4896)
Zn_peptidase_2	PF04298.12	gi|84490047|ref|YP_448279.1|	-	1.2	8.5	4.6	1.3	8.4	4.6	1.0	1	0	0	1	1	1	0	Putative	neutral	zinc	metallopeptidase
PorA	PF11271.8	gi|84490047|ref|YP_448279.1|	-	1.8	7.8	6.8	1.2	8.3	1.7	2.0	2	0	0	2	2	2	0	Porin	PorA
HAD_2	PF13419.6	gi|84490048|ref|YP_448280.1|	-	4.6e-29	101.7	0.4	8e-29	101.0	0.2	1.5	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|84490048|ref|YP_448280.1|	-	3.1e-14	53.8	0.1	6.8e-13	49.4	0.1	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|84490048|ref|YP_448280.1|	-	1.3e-09	37.9	0.0	2.5e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|84490048|ref|YP_448280.1|	-	0.0035	17.8	0.0	0.0076	16.7	0.0	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|84490048|ref|YP_448280.1|	-	0.016	15.3	0.1	1.2	9.2	0.0	2.8	3	1	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.14	gi|84490048|ref|YP_448280.1|	-	0.025	14.2	0.1	0.77	9.3	0.0	2.3	2	0	0	2	2	2	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
INT_SG_DDX_CT_C	PF15300.6	gi|84490048|ref|YP_448280.1|	-	0.049	13.4	0.0	0.1	12.4	0.0	1.5	1	0	0	1	1	1	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
HcyBio	PF01837.16	gi|84490049|ref|YP_448281.1|	-	4.6e-106	354.6	0.0	5.2e-106	354.4	0.0	1.0	1	0	0	1	1	1	1	Homocysteine	biosynthesis	enzyme,	sulfur-incorporation
Fer4	PF00037.27	gi|84490049|ref|YP_448281.1|	-	3.4e-06	26.6	3.6	3.4e-06	26.6	3.6	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84490049|ref|YP_448281.1|	-	0.00081	19.4	2.6	0.00081	19.4	2.6	2.6	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84490049|ref|YP_448281.1|	-	0.0011	18.9	3.6	0.0011	18.9	3.6	2.6	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84490049|ref|YP_448281.1|	-	0.0027	17.8	1.5	0.0027	17.8	1.5	2.5	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490049|ref|YP_448281.1|	-	0.0038	17.4	9.1	0.013	15.7	9.3	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84490049|ref|YP_448281.1|	-	0.004	17.7	12.2	0.11	13.1	11.9	2.6	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490049|ref|YP_448281.1|	-	0.016	15.3	11.1	0.074	13.2	11.2	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84490049|ref|YP_448281.1|	-	0.023	15.4	0.4	0.023	15.4	0.4	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|84490049|ref|YP_448281.1|	-	0.19	12.3	9.2	0.1	13.2	1.8	2.4	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490049|ref|YP_448281.1|	-	0.33	11.9	11.4	0.44	11.5	2.9	2.7	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|84490049|ref|YP_448281.1|	-	5.4	7.5	11.2	0.37	11.3	2.1	2.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84490049|ref|YP_448281.1|	-	8.4	7.3	8.2	0.74	10.7	3.2	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
tRNA-synt_2c	PF01411.19	gi|84490050|ref|YP_448282.1|	-	1.5e-129	433.1	0.0	2.3e-129	432.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.19	gi|84490050|ref|YP_448282.1|	-	3.3e-18	66.4	3.6	7.4e-18	65.3	3.6	1.6	1	0	0	1	1	1	1	DHHA1	domain
tRNA_SAD	PF07973.14	gi|84490050|ref|YP_448282.1|	-	1.4e-12	47.5	0.5	3e-12	46.4	0.5	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2e	PF02091.15	gi|84490050|ref|YP_448282.1|	-	1.6e-05	24.3	0.1	0.00016	21.1	0.0	2.5	3	0	0	3	3	3	1	Glycyl-tRNA	synthetase	alpha	subunit
Ribosomal_60s	PF00428.19	gi|84490051|ref|YP_448283.1|	-	4.6e-19	68.8	24.7	5.5e-19	68.6	24.7	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
EF-hand_14	PF17959.1	gi|84490051|ref|YP_448283.1|	-	0.017	15.4	0.2	0.032	14.6	0.0	1.5	2	0	0	2	2	2	0	EF-hand	domain
YceD	PF02620.17	gi|84490051|ref|YP_448283.1|	-	0.028	14.5	1.6	0.037	14.1	1.6	1.3	1	0	0	1	1	1	0	Large	ribosomal	RNA	subunit	accumulation	protein	YceD
PepSY_2	PF13670.6	gi|84490051|ref|YP_448283.1|	-	0.089	12.8	12.0	8.5	6.5	0.0	2.1	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
Paf1	PF03985.13	gi|84490051|ref|YP_448283.1|	-	0.09	11.8	2.9	0.098	11.6	2.9	1.1	1	0	0	1	1	1	0	Paf1
Ribosomal_L10	PF00466.20	gi|84490052|ref|YP_448284.1|	-	9.4e-23	80.3	0.3	2.2e-22	79.1	0.3	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
RL10P_insert	PF17777.1	gi|84490052|ref|YP_448284.1|	-	8.1e-21	73.8	0.1	2e-20	72.5	0.1	1.7	1	0	0	1	1	1	1	Insertion	domain	in	60S	ribosomal	protein	L10P
Ribosomal_60s	PF00428.19	gi|84490052|ref|YP_448284.1|	-	0.00086	19.8	9.5	0.00086	19.8	9.5	2.2	2	0	0	2	2	2	1	60s	Acidic	ribosomal	protein
Ribosomal_L1	PF00687.21	gi|84490053|ref|YP_448285.1|	-	9.4e-45	152.9	0.2	1.1e-44	152.6	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
DUF4695	PF15766.5	gi|84490053|ref|YP_448285.1|	-	0.016	15.4	0.0	0.21	11.8	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4695)
Bac_DNA_binding	PF00216.21	gi|84490053|ref|YP_448285.1|	-	0.072	13.3	0.2	0.16	12.2	0.2	1.6	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
Ribosomal_S30AE	PF02482.19	gi|84490053|ref|YP_448285.1|	-	0.11	13.3	0.6	2.3	9.1	0.1	2.2	2	0	0	2	2	2	0	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Ribosomal_L11_N	PF03946.14	gi|84490054|ref|YP_448286.1|	-	7.3e-26	89.8	1.9	1.9e-25	88.5	0.7	2.0	2	0	0	2	2	2	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|84490054|ref|YP_448286.1|	-	1.4e-18	67.1	0.0	2.3e-18	66.4	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Spt5-NGN	PF03439.13	gi|84490055|ref|YP_448287.1|	-	1.4e-19	69.7	0.0	3e-19	68.7	0.0	1.5	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|84490055|ref|YP_448287.1|	-	1.5e-06	27.9	0.0	2.9e-06	27.0	0.0	1.5	1	0	0	1	1	1	1	KOW	motif
NusG	PF02357.19	gi|84490055|ref|YP_448287.1|	-	0.076	13.5	0.1	1.2	9.7	0.0	2.6	2	1	0	2	2	2	0	Transcription	termination	factor	nusG
SecE	PF00584.20	gi|84490056|ref|YP_448288.1|	-	4.3e-08	32.9	0.0	5.1e-08	32.7	0.0	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Tubulin	PF00091.25	gi|84490057|ref|YP_448289.1|	-	1.7e-40	139.4	0.5	3.8e-40	138.2	0.5	1.6	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|84490057|ref|YP_448289.1|	-	1.7e-32	111.6	2.1	1.7e-32	111.6	2.1	2.7	3	1	1	4	4	4	1	FtsZ	family,	C-terminal	domain
Tubulin_2	PF13809.6	gi|84490057|ref|YP_448289.1|	-	0.03	13.5	2.6	0.095	11.9	1.4	2.4	2	1	0	2	2	2	0	Tubulin	like
CBM_17_28	PF03424.14	gi|84490057|ref|YP_448289.1|	-	0.23	11.2	4.1	0.18	11.5	0.7	2.0	2	0	0	2	2	2	0	Carbohydrate	binding	domain	(family	17/28)
ComA	PF02679.15	gi|84490058|ref|YP_448290.1|	-	3.5e-81	272.3	0.2	4.1e-81	272.0	0.2	1.0	1	0	0	1	1	1	1	(2R)-phospho-3-sulfolactate	synthase	(ComA)
F420_ligase	PF01996.16	gi|84490059|ref|YP_448291.1|	-	7.4e-26	91.0	0.0	9.3e-26	90.7	0.0	1.1	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
P3A	PF08727.11	gi|84490059|ref|YP_448291.1|	-	0.08	12.3	0.1	0.17	11.3	0.1	1.5	1	0	0	1	1	1	0	Poliovirus	3A	protein	like
TFIIE_alpha	PF02002.17	gi|84490060|ref|YP_448292.1|	-	2.3e-24	85.3	1.2	3.6e-24	84.6	1.2	1.4	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HNH	PF01844.23	gi|84490060|ref|YP_448292.1|	-	0.005	17.0	0.2	2.8	8.2	0.0	2.5	2	0	0	2	2	2	2	HNH	endonuclease
HypA	PF01155.19	gi|84490060|ref|YP_448292.1|	-	0.026	14.5	0.1	0.09	12.8	0.1	1.8	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_10	PF10058.9	gi|84490060|ref|YP_448292.1|	-	0.032	14.0	2.0	0.13	12.0	1.8	2.1	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf-C2H2	PF00096.26	gi|84490060|ref|YP_448292.1|	-	0.46	11.1	2.3	15	6.3	0.1	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
HD	PF01966.22	gi|84490061|ref|YP_448293.1|	-	5.6e-14	52.4	1.3	5.6e-14	52.4	1.3	1.6	2	0	0	2	2	2	1	HD	domain
NAD_binding_2	PF03446.15	gi|84490061|ref|YP_448293.1|	-	0.0047	17.1	0.0	0.0082	16.3	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
HDOD	PF08668.12	gi|84490061|ref|YP_448293.1|	-	0.12	11.9	0.0	1.3	8.5	0.0	2.0	1	1	0	1	1	1	0	HDOD	domain
TfuA	PF07812.12	gi|84490062|ref|YP_448294.1|	-	1.1e-45	154.2	0.0	2.1e-45	153.3	0.0	1.5	2	0	0	2	2	2	1	TfuA-like	protein
Pyr_redox_3	PF13738.6	gi|84490062|ref|YP_448294.1|	-	0.013	14.8	0.1	0.079	12.2	0.0	1.9	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
GatB_Yqey	PF02637.18	gi|84490062|ref|YP_448294.1|	-	0.019	14.9	0.7	0.15	12.0	0.3	2.2	2	0	0	2	2	2	0	GatB	domain
Patatin	PF01734.22	gi|84490062|ref|YP_448294.1|	-	0.071	13.3	0.0	0.1	12.8	0.0	1.2	1	0	0	1	1	1	0	Patatin-like	phospholipase
Abhydrolase_6	PF12697.7	gi|84490062|ref|YP_448294.1|	-	0.09	13.4	0.0	0.11	13.1	0.0	1.1	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
DUF2624	PF11116.8	gi|84490062|ref|YP_448294.1|	-	0.13	13.2	2.8	0.32	11.9	0.5	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2624)
QueC	PF06508.13	gi|84490063|ref|YP_448295.1|	-	3.1e-05	23.6	0.2	0.012	15.1	0.0	3.0	3	0	0	3	3	3	2	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|84490063|ref|YP_448295.1|	-	0.0019	18.0	0.0	0.0057	16.4	0.0	1.8	2	1	0	2	2	2	1	PP-loop	family
NAD_synthase	PF02540.17	gi|84490063|ref|YP_448295.1|	-	0.0024	17.0	0.1	0.29	10.2	0.0	2.8	3	0	0	3	3	3	2	NAD	synthase
UPF0270	PF06794.12	gi|84490063|ref|YP_448295.1|	-	0.03	14.4	0.3	1.3	9.1	0.0	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0270)
PAPS_reduct	PF01507.19	gi|84490063|ref|YP_448295.1|	-	0.047	13.7	0.7	0.37	10.8	0.0	2.5	3	1	0	3	3	3	0	Phosphoadenosine	phosphosulfate	reductase	family
CBS	PF00571.28	gi|84490064|ref|YP_448296.1|	-	6.4e-34	116.2	5.1	1.5e-12	47.7	0.2	4.4	4	1	0	4	4	4	4	CBS	domain
tRNA-synt_2b	PF00587.25	gi|84490065|ref|YP_448297.1|	-	1.4e-36	126.2	0.0	2.2e-36	125.5	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|84490065|ref|YP_448297.1|	-	5.4e-21	74.8	6.4	1.1e-20	73.8	6.4	1.5	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
FPP	PF05911.11	gi|84490065|ref|YP_448297.1|	-	0.051	11.8	3.1	0.073	11.3	3.1	1.1	1	0	0	1	1	1	0	Filament-like	plant	protein,	long	coiled-coil
HEPN_LA2681	PF18733.1	gi|84490065|ref|YP_448297.1|	-	0.052	12.8	1.3	0.091	12.1	1.3	1.3	1	0	0	1	1	1	0	LA2681-like	HEPN
DUF724	PF05266.14	gi|84490065|ref|YP_448297.1|	-	0.29	11.0	3.3	0.24	11.2	1.6	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
RDD	PF06271.12	gi|84490066|ref|YP_448298.1|	-	1.6e-12	47.8	6.4	2e-12	47.5	6.4	1.1	1	0	0	1	1	1	1	RDD	family
AIRS_C	PF02769.22	gi|84490067|ref|YP_448299.1|	-	2.5e-30	105.7	2.4	2.5e-30	105.7	2.4	1.6	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|84490067|ref|YP_448299.1|	-	2.5e-14	53.7	1.0	5.7e-14	52.5	0.2	2.0	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
DUF520	PF04461.13	gi|84490067|ref|YP_448299.1|	-	0.14	12.3	1.7	2	8.5	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF520)
Ribosomal_S8e	PF01201.22	gi|84490068|ref|YP_448300.1|	-	6.1e-31	107.4	5.1	6.9e-31	107.3	5.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
YihI	PF04220.12	gi|84490068|ref|YP_448300.1|	-	0.21	11.3	1.0	0.27	10.9	1.0	1.1	1	0	0	1	1	1	0	Der	GTPase	activator	(YihI)
DNA_pol_B	PF00136.21	gi|84490069|ref|YP_448301.1|	-	6.2e-28	97.7	1.2	7.4e-28	97.5	1.2	1.0	1	0	0	1	1	1	1	DNA	polymerase	family	B
Cas_Csd1	PF09709.10	gi|84490069|ref|YP_448301.1|	-	0.094	11.4	0.2	0.88	8.2	0.0	2.0	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_Csd1)
DUF945	PF06097.11	gi|84490069|ref|YP_448301.1|	-	0.13	11.4	0.1	0.29	10.2	0.1	1.7	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF945)
ABC1	PF03109.16	gi|84490070|ref|YP_448302.1|	-	2.5e-30	105.1	0.2	6.6e-30	103.7	0.2	1.8	1	0	0	1	1	1	1	ABC1	family
Pkinase	PF00069.25	gi|84490070|ref|YP_448302.1|	-	0.00017	21.0	1.9	0.00094	18.6	1.9	2.2	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.23	gi|84490070|ref|YP_448302.1|	-	0.00055	19.9	0.0	0.0018	18.2	0.1	1.7	2	0	0	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.17	gi|84490070|ref|YP_448302.1|	-	0.0029	16.9	2.3	0.25	10.6	0.1	3.2	3	0	0	3	3	3	1	Protein	tyrosine	kinase
Mal_decarbox_Al	PF16957.5	gi|84490070|ref|YP_448302.1|	-	0.0092	14.4	0.1	0.015	13.6	0.1	1.3	1	0	0	1	1	1	1	Malonate	decarboxylase,	alpha	subunit,	transporter
LAMTOR	PF15454.6	gi|84490070|ref|YP_448302.1|	-	0.065	13.9	0.3	1.4	9.6	0.1	2.4	2	0	0	2	2	2	0	Late	endosomal/lysosomal	adaptor	and	MAPK	and	MTOR	activator
zinc_ribbon_2	PF13240.6	gi|84490071|ref|YP_448303.1|	-	6e-08	32.2	7.0	1.3e-07	31.1	7.0	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|84490071|ref|YP_448303.1|	-	3.1e-05	23.2	1.7	5.9e-05	22.3	1.7	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84490071|ref|YP_448303.1|	-	0.00033	20.6	1.2	0.00058	19.8	1.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Nudix_N_2	PF14803.6	gi|84490071|ref|YP_448303.1|	-	0.0034	17.2	1.7	2.3	8.2	0.1	2.6	2	0	0	2	2	2	2	Nudix	N-terminal
RIFIN	PF02009.16	gi|84490071|ref|YP_448303.1|	-	0.008	16.1	4.6	0.008	16.1	4.6	2.2	2	1	0	2	2	2	1	Rifin
DUF2207	PF09972.9	gi|84490071|ref|YP_448303.1|	-	0.028	13.2	3.3	0.034	12.9	3.3	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
GP41	PF00517.17	gi|84490071|ref|YP_448303.1|	-	0.049	13.5	0.9	0.84	9.5	0.4	2.4	2	0	0	2	2	2	0	Retroviral	envelope	protein
zinc_ribbon_15	PF17032.5	gi|84490071|ref|YP_448303.1|	-	0.21	12.3	3.3	0.46	11.3	3.3	1.6	1	0	0	1	1	1	0	zinc-ribbon	family
NOB1_Zn_bind	PF08772.11	gi|84490071|ref|YP_448303.1|	-	4.4	7.5	5.3	14	5.9	5.3	1.9	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
PmbA_TldD	PF01523.16	gi|84490072|ref|YP_448304.1|	-	1.6e-55	188.9	2.5	2e-55	188.6	2.5	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF695	PF05117.12	gi|84490072|ref|YP_448304.1|	-	0.053	13.7	0.2	0.14	12.4	0.2	1.7	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF695)
RecG_N	PF17190.4	gi|84490072|ref|YP_448304.1|	-	5.7	7.7	6.8	0.8	10.5	1.8	2.2	3	0	0	3	3	3	0	RecG	N-terminal	helical	domain
HypD	PF01924.16	gi|84490073|ref|YP_448305.1|	-	9.8e-139	462.3	0.0	1.1e-138	462.2	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
Mur_ligase_M	PF08245.12	gi|84490074|ref|YP_448306.1|	-	1.7e-25	90.2	8.4	6.9e-24	84.9	2.2	3.5	3	2	2	5	5	5	2	Mur	ligase	middle	domain
NAD_binding_2	PF03446.15	gi|84490074|ref|YP_448306.1|	-	0.0081	16.3	0.1	0.05	13.8	0.0	2.3	3	0	0	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF1611	PF07755.11	gi|84490074|ref|YP_448306.1|	-	0.11	11.7	0.6	0.28	10.4	0.6	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
NTP_transf_3	PF12804.7	gi|84490077|ref|YP_448309.1|	-	9.3e-14	52.1	0.0	1e-13	51.9	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|84490077|ref|YP_448309.1|	-	1.1e-07	32.1	0.8	1.4e-07	31.6	0.8	1.3	1	1	0	1	1	1	1	Cytidylyltransferase
IspD	PF01128.19	gi|84490077|ref|YP_448309.1|	-	1e-05	25.4	0.0	1.3e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transferase	PF00483.23	gi|84490077|ref|YP_448309.1|	-	0.0049	16.5	0.1	0.0064	16.1	0.1	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
DUF169	PF02596.15	gi|84490078|ref|YP_448310.1|	-	3.3e-42	144.7	0.2	5.3e-25	88.6	0.2	2.0	1	1	1	2	2	2	2	Uncharacterised	ArCR,	COG2043
PcrB	PF01884.17	gi|84490079|ref|YP_448311.1|	-	5.4e-72	241.9	1.0	6.4e-72	241.7	1.0	1.0	1	0	0	1	1	1	1	PcrB	family
DHO_dh	PF01180.21	gi|84490079|ref|YP_448311.1|	-	4.3e-07	29.4	2.7	8.2e-07	28.5	0.5	2.0	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
His_biosynth	PF00977.21	gi|84490079|ref|YP_448311.1|	-	4.7e-07	29.5	0.4	1e-05	25.2	0.1	2.2	2	1	1	3	3	3	1	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|84490079|ref|YP_448311.1|	-	9.3e-05	21.7	0.4	0.031	13.4	0.1	2.2	2	0	0	2	2	2	2	Indole-3-glycerol	phosphate	synthase
IMPDH	PF00478.25	gi|84490079|ref|YP_448311.1|	-	0.00013	21.1	1.7	0.014	14.4	0.6	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
G3P_antiterm	PF04309.12	gi|84490079|ref|YP_448311.1|	-	0.0012	18.2	1.2	0.086	12.3	0.3	2.4	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
NanE	PF04131.14	gi|84490079|ref|YP_448311.1|	-	0.0015	17.8	1.5	0.14	11.3	0.2	2.7	2	1	1	3	3	3	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Trp_syntA	PF00290.20	gi|84490079|ref|YP_448311.1|	-	0.0015	17.4	0.5	0.0077	15.1	0.2	2.0	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
ThiG	PF05690.14	gi|84490079|ref|YP_448311.1|	-	0.0021	17.4	2.4	0.0058	16.0	0.2	2.4	2	1	1	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.17	gi|84490079|ref|YP_448311.1|	-	0.0099	15.2	0.3	0.075	12.4	0.0	2.1	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
Peripla_BP_1	PF00532.21	gi|84490079|ref|YP_448311.1|	-	0.018	14.5	0.6	0.1	12.0	0.0	2.2	2	1	0	2	2	2	0	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
Dus	PF01207.17	gi|84490079|ref|YP_448311.1|	-	0.019	14.0	0.2	0.16	11.0	0.1	2.0	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
OMPdecase	PF00215.24	gi|84490079|ref|YP_448311.1|	-	0.032	13.8	0.2	7.2	6.1	0.1	2.2	2	0	0	2	2	2	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Aldolase	PF01081.19	gi|84490079|ref|YP_448311.1|	-	0.037	13.4	0.5	0.17	11.3	0.1	2.0	2	0	0	2	2	2	0	KDPG	and	KHG	aldolase
FMN_dh	PF01070.18	gi|84490079|ref|YP_448311.1|	-	0.042	12.9	0.1	0.2	10.6	0.1	1.8	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
DUF2938	PF11158.8	gi|84490079|ref|YP_448311.1|	-	0.05	13.1	0.0	0.068	12.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2938)
Ribul_P_3_epim	PF00834.19	gi|84490079|ref|YP_448311.1|	-	0.068	12.5	0.2	0.12	11.7	0.2	1.4	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
TolB_N	PF04052.13	gi|84490079|ref|YP_448311.1|	-	0.11	12.7	0.1	4.6	7.5	0.0	2.3	2	0	0	2	2	2	0	TolB	amino-terminal	domain
PrpR_N	PF06506.11	gi|84490079|ref|YP_448311.1|	-	0.25	10.9	3.9	0.42	10.2	0.2	2.9	3	1	0	3	3	3	0	Propionate	catabolism	activator
Ribosomal_L40e	PF01020.17	gi|84490080|ref|YP_448312.1|	-	4.9e-05	23.1	3.8	5.8e-05	22.9	3.8	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.6	gi|84490080|ref|YP_448312.1|	-	0.0003	20.4	3.6	0.0004	20.0	3.6	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|84490080|ref|YP_448312.1|	-	0.0012	18.8	0.8	0.0012	18.8	0.8	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
DHHC	PF01529.20	gi|84490080|ref|YP_448312.1|	-	0.028	14.5	1.0	0.03	14.4	1.0	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
zf-ribbon_3	PF13248.6	gi|84490080|ref|YP_448312.1|	-	0.047	13.1	2.7	0.065	12.7	2.7	1.2	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|84490080|ref|YP_448312.1|	-	0.053	12.8	3.5	0.075	12.4	3.5	1.3	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
UPF0547	PF10571.9	gi|84490080|ref|YP_448312.1|	-	0.099	12.7	2.6	0.18	11.9	2.6	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_13	PF09855.9	gi|84490080|ref|YP_448312.1|	-	0.12	12.6	3.0	3.2	8.0	3.0	2.1	1	1	0	1	1	1	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Ribo_biogen_C	PF04034.13	gi|84490081|ref|YP_448313.1|	-	4.5e-50	168.6	0.1	6.4e-50	168.1	0.1	1.2	1	0	0	1	1	1	1	Ribosome	biogenesis	protein,	C-terminal
RLI	PF04068.15	gi|84490081|ref|YP_448313.1|	-	5.8e-08	32.4	0.5	5.8e-08	32.4	0.5	1.9	2	0	0	2	2	2	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
COLFI	PF01410.18	gi|84490081|ref|YP_448313.1|	-	0.082	12.2	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Fibrillar	collagen	C-terminal	domain
DUF116	PF01976.17	gi|84490082|ref|YP_448314.1|	-	9.1e-43	145.4	4.6	1.1e-42	145.2	4.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF116
Nitro_FeMo-Co	PF02579.17	gi|84490083|ref|YP_448315.1|	-	7.3e-17	61.5	0.1	9.3e-17	61.2	0.1	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
AnfO_nitrog	PF09582.10	gi|84490083|ref|YP_448315.1|	-	4.9e-06	26.0	1.8	5.6e-06	25.8	1.8	1.0	1	0	0	1	1	1	1	Iron	only	nitrogenase	protein	AnfO	(AnfO_nitrog)
HTH_WhiA	PF02650.14	gi|84490084|ref|YP_448316.1|	-	0.047	14.0	0.9	0.45	10.9	0.1	2.6	3	0	0	3	3	3	0	WhiA	C-terminal	HTH	domain
Mis14	PF08641.12	gi|84490084|ref|YP_448316.1|	-	0.084	13.2	1.4	0.28	11.5	0.3	2.2	2	0	0	2	2	2	0	Kinetochore	protein	Mis14	like
Ribosomal_S3Ae	PF01015.18	gi|84490085|ref|YP_448317.1|	-	2.6e-60	203.5	6.6	2.9e-60	203.3	6.6	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
IlvC	PF01450.19	gi|84490085|ref|YP_448317.1|	-	0.0017	18.7	0.5	0.0034	17.7	0.5	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
DUF2271	PF10029.9	gi|84490085|ref|YP_448317.1|	-	0.023	14.3	0.1	0.037	13.7	0.1	1.4	1	0	0	1	1	1	0	Predicted	periplasmic	protein	(DUF2271)
PNPase	PF03726.14	gi|84490085|ref|YP_448317.1|	-	0.033	14.7	2.0	4.2	7.9	0.0	2.4	2	0	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DUF92	PF01940.16	gi|84490086|ref|YP_448318.1|	-	6.7e-46	156.6	18.0	1.4e-45	155.5	18.0	1.5	1	1	0	1	1	1	1	Integral	membrane	protein	DUF92
DUF4131	PF13567.6	gi|84490086|ref|YP_448318.1|	-	6.8	6.3	9.3	9.7	5.8	3.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
PhosphMutase	PF10143.9	gi|84490087|ref|YP_448319.1|	-	4.9e-59	199.0	0.0	7.5e-59	198.4	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|84490087|ref|YP_448319.1|	-	1.9e-45	155.2	0.3	2.3e-45	154.9	0.3	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|84490087|ref|YP_448319.1|	-	0.0026	17.4	0.4	0.098	12.2	0.2	2.2	2	0	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.20	gi|84490087|ref|YP_448319.1|	-	0.048	12.6	1.0	0.099	11.6	0.1	1.9	2	0	0	2	2	2	0	Alkaline	phosphatase
PGM_PMM_I	PF02878.16	gi|84490088|ref|YP_448320.1|	-	9.5e-45	151.7	0.0	1.5e-44	151.0	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|84490088|ref|YP_448320.1|	-	6.1e-28	97.5	0.1	1.4e-27	96.3	0.1	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|84490088|ref|YP_448320.1|	-	1.5e-18	67.0	0.0	4.8e-18	65.4	0.0	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|84490088|ref|YP_448320.1|	-	4.8e-12	45.9	0.0	1.3e-11	44.5	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
OpuAC	PF04069.12	gi|84490088|ref|YP_448320.1|	-	0.075	12.6	0.1	0.14	11.7	0.1	1.5	1	0	0	1	1	1	0	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
DUF4115	PF13464.6	gi|84490088|ref|YP_448320.1|	-	0.089	13.0	0.0	0.19	11.9	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4115)
NTP_transferase	PF00483.23	gi|84490089|ref|YP_448321.1|	-	1.6e-48	165.5	0.0	2.2e-48	165.0	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|84490089|ref|YP_448321.1|	-	1.6e-13	49.8	24.2	9.2e-06	25.2	2.4	5.1	2	1	3	5	5	5	5	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|84490089|ref|YP_448321.1|	-	2.7e-13	50.6	0.0	3.7e-13	50.1	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|84490089|ref|YP_448321.1|	-	1e-07	31.5	15.4	0.00017	21.3	0.3	4.6	3	1	1	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
DUF4954	PF16314.5	gi|84490089|ref|YP_448321.1|	-	0.0021	16.3	0.3	0.0021	16.3	0.3	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4954)
IspD	PF01128.19	gi|84490089|ref|YP_448321.1|	-	0.017	14.8	0.0	0.028	14.2	0.0	1.3	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.12	gi|84490089|ref|YP_448321.1|	-	0.057	12.4	1.8	4.1	6.2	0.1	2.6	2	1	0	3	3	3	0	L-fucokinase
NiFeSe_Hases	PF00374.19	gi|84490090|ref|YP_448322.1|	-	9e-37	127.1	12.8	2.3e-22	79.6	0.1	5.1	2	1	2	4	4	4	4	Nickel-dependent	hydrogenase
Complex1_49kDa	PF00346.19	gi|84490090|ref|YP_448322.1|	-	0.022	13.9	0.1	0.15	11.2	0.0	2.1	2	0	0	2	2	2	0	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
APG17	PF04108.12	gi|84490090|ref|YP_448322.1|	-	0.066	12.3	0.2	0.74	8.9	0.0	2.0	2	0	0	2	2	2	0	Autophagy	protein	Apg17
HycI	PF01750.18	gi|84490091|ref|YP_448323.1|	-	4.3e-22	78.3	0.2	5e-22	78.1	0.2	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
Oxidored_q6	PF01058.22	gi|84490092|ref|YP_448324.1|	-	1.9e-26	92.4	3.2	3.2e-26	91.7	0.0	2.1	2	0	0	2	2	2	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4	PF00037.27	gi|84490092|ref|YP_448324.1|	-	2e-09	36.8	11.9	2.3e-07	30.3	1.1	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84490092|ref|YP_448324.1|	-	1.2e-06	28.5	12.3	3.1e-06	27.2	12.3	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490092|ref|YP_448324.1|	-	2.2e-06	27.7	12.7	4.7e-06	26.7	12.7	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84490092|ref|YP_448324.1|	-	4.2e-06	27.3	15.0	3.5e-05	24.3	15.0	2.5	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84490092|ref|YP_448324.1|	-	4.5e-06	26.4	15.7	0.0036	17.3	2.8	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84490092|ref|YP_448324.1|	-	9.5e-06	25.7	13.4	0.0013	19.1	1.8	2.9	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84490092|ref|YP_448324.1|	-	4.8e-05	23.2	16.4	0.00015	21.7	3.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84490092|ref|YP_448324.1|	-	0.0002	21.4	13.9	0.078	13.1	5.2	2.6	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84490092|ref|YP_448324.1|	-	0.0011	19.3	14.6	0.024	15.1	1.6	2.9	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490092|ref|YP_448324.1|	-	0.0015	19.4	13.5	0.0047	17.8	3.8	3.1	3	0	0	3	3	3	1	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.6	gi|84490092|ref|YP_448324.1|	-	0.0075	17.0	1.2	0.0075	17.0	1.2	2.9	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|84490092|ref|YP_448324.1|	-	0.054	14.1	17.7	0.25	11.9	4.7	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84490092|ref|YP_448324.1|	-	0.16	12.2	10.5	0.31	11.2	9.2	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84490092|ref|YP_448324.1|	-	0.53	11.2	14.9	0.3	11.9	3.6	2.8	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84490092|ref|YP_448324.1|	-	4.3	7.9	16.5	0.15	12.6	2.5	2.8	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
FrhB_FdhB_C	PF04432.13	gi|84490093|ref|YP_448325.1|	-	2e-42	144.7	0.1	2.8e-42	144.2	0.1	1.2	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|84490093|ref|YP_448325.1|	-	2e-30	104.7	0.1	4e-30	103.8	0.1	1.5	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
SM-ATX	PF14438.6	gi|84490093|ref|YP_448325.1|	-	0.094	12.9	0.0	0.2	11.8	0.0	1.6	1	0	0	1	1	1	0	Ataxin	2	SM	domain
DUF45	PF01863.17	gi|84490094|ref|YP_448326.1|	-	3.1e-32	112.3	0.6	4e-30	105.4	0.5	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF45
WLM	PF08325.10	gi|84490094|ref|YP_448326.1|	-	0.0014	18.8	1.1	0.0023	18.0	0.3	1.7	2	0	0	2	2	2	1	WLM	domain
Peptidase_M57	PF12388.8	gi|84490094|ref|YP_448326.1|	-	0.0053	16.4	1.0	0.011	15.3	1.0	1.7	1	1	0	1	1	1	1	Dual-action	HEIGH	metallo-peptidase
FAD_binding_3	PF01494.19	gi|84490095|ref|YP_448327.1|	-	2.6e-19	69.7	0.4	1.5e-13	50.8	0.1	2.7	2	1	0	2	2	2	2	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|84490095|ref|YP_448327.1|	-	1e-08	35.0	0.4	3.1e-08	33.4	0.4	1.8	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|84490095|ref|YP_448327.1|	-	3.7e-08	32.9	0.0	7.1e-08	31.9	0.0	1.5	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|84490095|ref|YP_448327.1|	-	1.8e-07	31.0	0.3	0.00015	21.5	0.1	2.4	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|84490095|ref|YP_448327.1|	-	4.8e-07	29.0	0.0	0.00052	19.0	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
HI0933_like	PF03486.14	gi|84490095|ref|YP_448327.1|	-	5.1e-07	28.7	0.1	1.2e-06	27.5	0.1	1.6	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_2	PF07992.14	gi|84490095|ref|YP_448327.1|	-	1.9e-06	27.3	0.1	8.4e-06	25.2	0.2	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|84490095|ref|YP_448327.1|	-	4.3e-06	26.9	0.3	1.1e-05	25.6	0.1	1.8	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|84490095|ref|YP_448327.1|	-	3e-05	23.2	0.0	0.034	13.2	0.1	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|84490095|ref|YP_448327.1|	-	4e-05	23.0	0.7	0.00022	20.5	0.1	2.4	2	1	1	3	3	3	1	Thi4	family
GIDA	PF01134.22	gi|84490095|ref|YP_448327.1|	-	9.1e-05	21.7	0.3	9.1e-05	21.7	0.3	2.0	2	1	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|84490095|ref|YP_448327.1|	-	0.00036	19.9	0.4	0.0012	18.2	0.1	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|84490095|ref|YP_448327.1|	-	0.00092	18.6	0.1	0.0023	17.3	0.1	1.7	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.6	gi|84490095|ref|YP_448327.1|	-	0.023	15.1	0.2	0.055	13.9	0.0	1.9	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Shikimate_DH	PF01488.20	gi|84490095|ref|YP_448327.1|	-	0.057	13.5	0.9	0.22	11.6	0.1	2.3	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.27	gi|84490095|ref|YP_448327.1|	-	0.097	13.2	0.8	1.4	9.5	0.1	2.9	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|84490095|ref|YP_448327.1|	-	0.14	12.1	0.0	0.6	10.1	0.0	2.1	2	1	0	2	2	2	0	FAD-NAD(P)-binding
Adenine_deam_C	PF13382.6	gi|84490096|ref|YP_448328.1|	-	7.9e-61	204.3	0.6	1.3e-60	203.6	0.6	1.4	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.20	gi|84490096|ref|YP_448328.1|	-	9.2e-41	140.3	0.2	3.9e-38	131.6	0.2	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|84490096|ref|YP_448328.1|	-	1e-08	35.1	0.1	6.6e-05	22.6	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
DUF447	PF04289.12	gi|84490097|ref|YP_448329.1|	-	8.4e-43	146.2	1.2	9.6e-43	146.0	1.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
IF3_C	PF00707.22	gi|84490097|ref|YP_448329.1|	-	0.04	13.9	0.0	11	6.1	0.0	2.4	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	C-terminal	domain
Chordopox_A13L	PF05961.11	gi|84490098|ref|YP_448330.1|	-	0.044	14.0	1.1	0.044	14.0	1.1	2.0	1	1	1	2	2	2	0	Chordopoxvirus	A13L	protein
DUF4131	PF13567.6	gi|84490098|ref|YP_448330.1|	-	0.11	12.1	2.5	0.12	12.0	2.5	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
TcpE	PF12648.7	gi|84490098|ref|YP_448330.1|	-	0.18	12.4	7.7	0.18	12.3	7.7	1.0	1	0	0	1	1	1	0	TcpE	family
RDD	PF06271.12	gi|84490098|ref|YP_448330.1|	-	0.21	11.8	8.8	0.24	11.6	8.8	1.1	1	0	0	1	1	1	0	RDD	family
DUF2207	PF09972.9	gi|84490098|ref|YP_448330.1|	-	0.7	8.6	7.9	0.72	8.5	7.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Halogen_Hydrol	PF10112.9	gi|84490098|ref|YP_448330.1|	-	0.87	9.6	4.9	0.91	9.5	4.9	1.0	1	0	0	1	1	1	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
DUF2070	PF09843.9	gi|84490098|ref|YP_448330.1|	-	1.2	7.4	7.1	1.2	7.3	7.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
Wzy_C	PF04932.15	gi|84490098|ref|YP_448330.1|	-	2.5	7.7	7.8	2.7	7.6	7.8	1.0	1	0	0	1	1	1	0	O-Antigen	ligase
GATase	PF00117.28	gi|84490099|ref|YP_448331.1|	-	1.8e-40	138.8	0.2	2.1e-40	138.5	0.2	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|84490099|ref|YP_448331.1|	-	1.6e-13	50.9	0.1	5e-13	49.3	0.1	1.8	1	1	0	1	1	1	1	Peptidase	C26
GMP_synt_C	PF00958.22	gi|84490100|ref|YP_448332.1|	-	1.1e-30	105.5	0.0	2e-30	104.7	0.0	1.4	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|84490100|ref|YP_448332.1|	-	3e-10	39.7	0.2	1e-06	28.0	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|84490100|ref|YP_448332.1|	-	5.1e-05	22.2	0.0	0.00037	19.4	0.0	2.0	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.20	gi|84490100|ref|YP_448332.1|	-	7.2e-05	22.6	0.0	0.00014	21.7	0.0	1.5	1	0	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.19	gi|84490100|ref|YP_448332.1|	-	0.00014	22.0	0.0	0.00023	21.2	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ThiI	PF02568.14	gi|84490100|ref|YP_448332.1|	-	0.0014	18.2	0.0	0.0032	17.1	0.0	1.7	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.13	gi|84490100|ref|YP_448332.1|	-	0.0016	18.0	0.0	0.013	15.0	0.0	2.1	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|84490100|ref|YP_448332.1|	-	0.0036	17.0	0.0	0.006	16.3	0.0	1.4	1	0	0	1	1	1	1	Asparagine	synthase
Arginosuc_synth	PF00764.19	gi|84490100|ref|YP_448332.1|	-	0.077	12.3	0.2	0.19	11.0	0.1	1.6	2	0	0	2	2	2	0	Arginosuccinate	synthase
Toprim_N	PF08275.11	gi|84490100|ref|YP_448332.1|	-	0.11	12.5	0.0	0.29	11.2	0.0	1.7	1	0	0	1	1	1	0	DNA	primase	catalytic	core,	N-terminal	domain
DUF815	PF05673.13	gi|84490101|ref|YP_448333.1|	-	2.3e-93	312.0	0.2	3.3e-93	311.4	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA	PF00004.29	gi|84490101|ref|YP_448333.1|	-	3.4e-06	27.5	0.1	3e-05	24.5	0.0	2.6	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|84490101|ref|YP_448333.1|	-	2.2e-05	24.9	0.0	4.5e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|84490101|ref|YP_448333.1|	-	0.00099	19.4	0.0	0.0021	18.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Torsin	PF06309.11	gi|84490101|ref|YP_448333.1|	-	0.0015	18.6	0.1	0.0034	17.5	0.1	1.5	1	0	0	1	1	1	1	Torsin
AAA_7	PF12775.7	gi|84490101|ref|YP_448333.1|	-	0.0021	17.6	0.1	0.0063	16.1	0.1	1.8	1	1	0	1	1	1	1	P-loop	containing	dynein	motor	region
UvsY	PF11056.8	gi|84490101|ref|YP_448333.1|	-	0.0027	18.0	1.3	0.009	16.4	1.3	1.9	1	0	0	1	1	1	1	Recombination,	repair	and	ssDNA	binding	protein	UvsY
Bac_DnaA	PF00308.18	gi|84490101|ref|YP_448333.1|	-	0.0042	17.0	0.2	0.0095	15.8	0.2	1.5	1	0	0	1	1	1	1	Bacterial	dnaA	protein
ABC_tran	PF00005.27	gi|84490101|ref|YP_448333.1|	-	0.0071	16.9	0.1	0.018	15.5	0.0	1.8	2	0	0	2	2	1	1	ABC	transporter
AAA_30	PF13604.6	gi|84490101|ref|YP_448333.1|	-	0.0072	16.1	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|84490101|ref|YP_448333.1|	-	0.0093	15.0	0.0	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_10	PF12846.7	gi|84490101|ref|YP_448333.1|	-	0.014	14.3	0.0	0.025	13.5	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
RNA_helicase	PF00910.22	gi|84490101|ref|YP_448333.1|	-	0.017	15.5	0.6	0.076	13.4	0.2	2.3	1	1	0	2	2	2	0	RNA	helicase
AAA_29	PF13555.6	gi|84490101|ref|YP_448333.1|	-	0.028	14.2	0.0	0.06	13.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.6	gi|84490101|ref|YP_448333.1|	-	0.041	13.6	0.0	0.076	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|84490101|ref|YP_448333.1|	-	0.051	13.3	0.0	0.091	12.5	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_19	PF13245.6	gi|84490101|ref|YP_448333.1|	-	0.056	13.8	0.0	0.11	12.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|84490101|ref|YP_448333.1|	-	0.076	12.3	0.0	0.16	11.3	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.9	gi|84490101|ref|YP_448333.1|	-	0.092	11.6	0.0	0.2	10.5	0.0	1.5	1	1	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Viral_helicase1	PF01443.18	gi|84490101|ref|YP_448333.1|	-	0.11	12.2	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RuvB_N	PF05496.12	gi|84490101|ref|YP_448333.1|	-	0.13	12.0	0.0	0.28	10.9	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DUF87	PF01935.17	gi|84490101|ref|YP_448333.1|	-	0.38	10.8	4.9	0.32	11.1	0.1	2.9	2	1	1	3	3	3	0	Helicase	HerA,	central	domain
F420_oxidored	PF03807.17	gi|84490102|ref|YP_448334.1|	-	2.1e-12	47.4	0.0	2.3e-11	44.1	0.0	2.4	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
P5CR_dimer	PF14748.6	gi|84490102|ref|YP_448334.1|	-	0.0015	18.8	0.0	0.0028	17.9	0.0	1.5	1	1	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
NAD_binding_2	PF03446.15	gi|84490102|ref|YP_448334.1|	-	0.0027	17.9	0.0	0.016	15.4	0.0	2.0	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Semialdhyde_dh	PF01118.24	gi|84490102|ref|YP_448334.1|	-	0.0052	17.2	0.0	0.017	15.5	0.0	2.1	1	1	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|84490102|ref|YP_448334.1|	-	0.0063	16.5	0.3	0.12	12.3	0.2	2.5	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Rossmann-like	PF10727.9	gi|84490102|ref|YP_448334.1|	-	0.015	15.2	0.1	0.086	12.7	0.1	2.2	2	1	0	2	2	2	0	Rossmann-like	domain
2-Hacid_dh_C	PF02826.19	gi|84490102|ref|YP_448334.1|	-	0.019	14.4	0.1	0.035	13.5	0.1	1.6	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Ldh_1_N	PF00056.23	gi|84490102|ref|YP_448334.1|	-	0.035	14.2	0.1	0.14	12.2	0.1	1.9	1	1	1	2	2	2	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Nre_N	PF04894.12	gi|84490103|ref|YP_448335.1|	-	1.8e-82	277.2	0.9	2.7e-82	276.6	0.9	1.2	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|84490103|ref|YP_448335.1|	-	2.2e-36	124.1	0.0	4.4e-36	123.1	0.0	1.5	1	0	0	1	1	1	1	Archaeal	Nre,	C-terminal
CGI-121	PF08617.10	gi|84490105|ref|YP_448337.1|	-	4.7e-11	43.1	3.3	6.8e-11	42.5	3.3	1.2	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
Prenyltransf	PF01255.19	gi|84490105|ref|YP_448337.1|	-	0.035	13.6	0.5	0.04	13.4	0.5	1.2	1	0	0	1	1	1	0	Putative	undecaprenyl	diphosphate	synthase
HMGL-like	PF00682.19	gi|84490106|ref|YP_448338.1|	-	2.8e-76	256.6	0.4	5.6e-76	255.6	0.4	1.5	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|84490106|ref|YP_448338.1|	-	2.4e-32	111.6	3.0	5.2e-32	110.5	3.0	1.6	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
DUF4032	PF13224.6	gi|84490106|ref|YP_448338.1|	-	0.037	13.9	0.3	0.39	10.6	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4032)
UPF0020	PF01170.18	gi|84490107|ref|YP_448339.1|	-	1.5e-33	116.2	0.0	1.5e-32	112.9	0.0	2.1	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
N6_N4_Mtase	PF01555.18	gi|84490107|ref|YP_448339.1|	-	2.9e-11	43.5	0.3	1.5e-09	37.9	0.1	2.2	2	0	0	2	2	2	1	DNA	methylase
THUMP	PF02926.17	gi|84490107|ref|YP_448339.1|	-	1.1e-09	38.5	0.1	3.5e-09	36.9	0.1	1.9	1	1	0	1	1	1	1	THUMP	domain
Methyltransf_31	PF13847.6	gi|84490107|ref|YP_448339.1|	-	3e-09	36.8	0.0	5.4e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|84490107|ref|YP_448339.1|	-	5.3e-06	26.1	0.0	8.9e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
N6_Mtase	PF02384.16	gi|84490107|ref|YP_448339.1|	-	7.1e-06	25.5	0.0	1.3e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_25	PF13649.6	gi|84490107|ref|YP_448339.1|	-	3.7e-05	24.4	0.0	7.7e-05	23.3	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|84490107|ref|YP_448339.1|	-	8.1e-05	22.3	0.0	0.00014	21.5	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MethyltransfD12	PF02086.15	gi|84490107|ref|YP_448339.1|	-	0.0002	21.1	2.9	0.0042	16.8	0.0	2.9	3	1	1	4	4	4	1	D12	class	N6	adenine-specific	DNA	methyltransferase
AviRa	PF11599.8	gi|84490107|ref|YP_448339.1|	-	0.0007	19.1	0.1	0.44	10.0	0.0	2.4	1	1	1	2	2	2	2	RRNA	methyltransferase	AviRa
Alpha_Helical	PF18489.1	gi|84490107|ref|YP_448339.1|	-	0.0019	18.4	0.2	12	6.1	0.0	3.2	3	0	0	3	3	3	1	Alpha	helical	domain
Methyltransf_15	PF09445.10	gi|84490107|ref|YP_448339.1|	-	0.042	13.4	0.0	0.12	12.0	0.0	1.7	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_11	PF08241.12	gi|84490107|ref|YP_448339.1|	-	0.063	13.9	0.0	0.17	12.5	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|84490107|ref|YP_448339.1|	-	0.079	12.3	0.0	0.15	11.3	0.0	1.4	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Pyr_redox_2	PF07992.14	gi|84490108|ref|YP_448340.1|	-	1.4e-08	34.4	0.1	0.00075	18.8	0.0	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|84490108|ref|YP_448340.1|	-	3.1e-08	33.6	0.0	0.00019	21.2	0.0	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|84490108|ref|YP_448340.1|	-	1.9e-07	30.3	0.0	3.1e-05	23.0	0.0	2.3	2	1	0	2	2	2	2	Tryptophan	halogenase
NAD_binding_8	PF13450.6	gi|84490108|ref|YP_448340.1|	-	1.9e-07	31.2	0.0	5.7e-07	29.7	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|84490108|ref|YP_448340.1|	-	3e-07	29.5	0.2	9e-07	27.9	0.0	1.9	3	0	0	3	3	3	1	HI0933-like	protein
Pyr_redox	PF00070.27	gi|84490108|ref|YP_448340.1|	-	6.7e-06	26.6	1.1	0.00011	22.7	0.0	3.0	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.16	gi|84490108|ref|YP_448340.1|	-	0.00011	21.9	0.0	0.00026	20.7	0.0	1.7	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
GIDA	PF01134.22	gi|84490108|ref|YP_448340.1|	-	0.00019	20.7	0.0	0.00034	19.8	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|84490108|ref|YP_448340.1|	-	0.0011	18.3	0.9	0.0065	15.7	0.9	2.0	1	1	0	1	1	1	1	Thi4	family
Lycopene_cycl	PF05834.12	gi|84490108|ref|YP_448340.1|	-	0.002	17.3	0.0	0.04	13.0	0.0	2.2	1	1	0	1	1	1	1	Lycopene	cyclase	protein
FAD_oxidored	PF12831.7	gi|84490108|ref|YP_448340.1|	-	0.0021	17.5	0.1	0.0039	16.6	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|84490108|ref|YP_448340.1|	-	0.0048	16.2	0.0	0.31	10.2	0.0	2.7	1	1	0	1	1	1	1	FAD	binding	domain
3HCDH_N	PF02737.18	gi|84490108|ref|YP_448340.1|	-	0.0091	15.9	0.0	0.026	14.4	0.0	1.8	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox_3	PF13738.6	gi|84490108|ref|YP_448340.1|	-	0.015	14.5	0.5	0.3	10.3	0.1	2.3	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|84490108|ref|YP_448340.1|	-	0.092	11.8	0.0	0.21	10.7	0.0	1.6	2	0	0	2	2	2	0	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|84490108|ref|YP_448340.1|	-	0.1	13.0	0.0	0.19	12.2	0.0	1.6	1	1	0	1	1	1	0	Putative	NAD(P)-binding
bPH_2	PF03703.14	gi|84490109|ref|YP_448341.1|	-	5e-18	65.1	0.0	8.6e-18	64.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	PH	domain
bPH_3	PF14470.6	gi|84490109|ref|YP_448341.1|	-	0.00074	19.8	0.4	0.0022	18.3	0.4	1.9	1	1	0	1	1	1	1	Bacterial	PH	domain
bPH_4	PF06713.11	gi|84490109|ref|YP_448341.1|	-	0.0059	16.7	0.3	0.014	15.4	0.3	1.7	1	0	0	1	1	1	1	Bacterial	PH	domain
Exonuc_VII_L	PF02601.15	gi|84490109|ref|YP_448341.1|	-	0.015	14.9	0.0	0.02	14.5	0.0	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
TPR_1	PF00515.28	gi|84490111|ref|YP_448343.1|	-	1.8e-52	173.1	16.5	2.3e-09	36.7	0.5	7.2	7	0	0	7	7	7	7	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|84490111|ref|YP_448343.1|	-	2.8e-46	151.9	5.4	5.6e-07	29.2	0.0	7.2	7	0	0	7	7	7	7	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|84490111|ref|YP_448343.1|	-	3.5e-43	145.0	11.9	3.6e-11	42.6	0.6	7.2	2	2	5	7	7	7	7	TPR	repeat
TPR_8	PF13181.6	gi|84490111|ref|YP_448343.1|	-	7.5e-36	119.3	14.8	3.3e-06	26.9	0.2	7.4	7	0	0	7	7	7	7	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|84490111|ref|YP_448343.1|	-	1.2e-30	103.6	18.3	9.3e-06	25.7	1.4	7.5	8	0	0	8	8	7	6	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|84490111|ref|YP_448343.1|	-	7e-28	96.7	1.1	2.5e-08	34.1	0.3	5.3	3	2	1	4	4	4	4	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|84490111|ref|YP_448343.1|	-	8.7e-22	76.0	0.0	0.001	19.7	0.0	6.9	2	2	5	7	7	7	4	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|84490111|ref|YP_448343.1|	-	2.4e-21	74.1	1.8	0.00074	19.4	0.0	7.2	7	0	0	7	7	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|84490111|ref|YP_448343.1|	-	7.4e-20	71.2	1.0	1.2e-06	29.0	0.3	4.4	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|84490111|ref|YP_448343.1|	-	4.5e-19	68.4	0.0	1.8e-06	28.0	0.0	4.2	3	1	1	4	4	4	4	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|84490111|ref|YP_448343.1|	-	5.9e-17	62.0	0.0	4.7e-06	27.1	0.0	4.2	2	1	3	5	5	5	5	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|84490111|ref|YP_448343.1|	-	1.1e-12	47.4	3.3	0.12	12.3	0.2	6.8	7	0	0	7	7	7	3	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|84490111|ref|YP_448343.1|	-	6.8e-12	45.2	2.2	0.062	14.0	0.0	6.6	8	0	0	8	8	6	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|84490111|ref|YP_448343.1|	-	1.6e-08	34.6	3.2	0.059	13.6	0.0	3.8	2	2	2	4	4	4	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
Fis1_TPR_C	PF14853.6	gi|84490111|ref|YP_448343.1|	-	2.4e-07	30.7	7.5	0.042	13.9	0.0	5.7	4	1	2	6	6	6	2	Fis1	C-terminal	tetratricopeptide	repeat
NARP1	PF12569.8	gi|84490111|ref|YP_448343.1|	-	2e-05	23.7	6.6	0.08	11.8	2.1	3.7	1	1	1	2	2	2	2	NMDA	receptor-regulated	protein	1
NRBF2_MIT	PF17169.4	gi|84490111|ref|YP_448343.1|	-	2.5e-05	24.4	0.6	0.6	10.4	0.0	4.2	2	2	3	5	5	5	2	MIT	domain	of	nuclear	receptor-binding	factor	2
TPR_15	PF13429.6	gi|84490111|ref|YP_448343.1|	-	2.9e-05	23.4	0.1	0.13	11.5	0.1	3.3	1	1	2	4	4	4	3	Tetratricopeptide	repeat
MIT	PF04212.18	gi|84490111|ref|YP_448343.1|	-	0.00036	20.5	10.5	1.2	9.2	0.4	5.5	5	1	1	6	6	5	1	MIT	(microtubule	interacting	and	transport)	domain
DUF3856	PF12968.7	gi|84490111|ref|YP_448343.1|	-	0.00039	20.5	2.0	1.7	8.7	0.0	4.7	1	1	3	4	4	4	1	Domain	of	Unknown	Function	(DUF3856)
BTAD	PF03704.17	gi|84490111|ref|YP_448343.1|	-	0.00041	20.8	0.0	0.054	13.9	0.0	2.9	1	1	0	2	2	2	1	Bacterial	transcriptional	activator	domain
TPR_21	PF09976.9	gi|84490111|ref|YP_448343.1|	-	0.0036	17.0	0.2	1.3	8.6	0.0	2.9	2	2	0	2	2	2	1	Tetratricopeptide	repeat-like	domain
TPR_MalT	PF17874.1	gi|84490111|ref|YP_448343.1|	-	0.0037	16.7	0.0	0.24	10.7	0.0	2.6	1	1	0	2	2	2	1	MalT-like	TPR	region
ASCH	PF04266.14	gi|84490111|ref|YP_448343.1|	-	0.009	16.6	0.1	0.019	15.5	0.1	1.5	1	0	0	1	1	1	1	ASCH	domain
ATP13	PF12921.7	gi|84490111|ref|YP_448343.1|	-	0.011	15.5	0.5	2.4	8.0	0.1	2.9	2	1	1	3	3	3	0	Mitochondrial	ATPase	expression
Coatomer_E	PF04733.14	gi|84490111|ref|YP_448343.1|	-	0.04	13.3	3.3	0.52	9.7	2.4	2.8	1	1	1	2	2	2	0	Coatomer	epsilon	subunit
SHNi-TPR	PF10516.9	gi|84490111|ref|YP_448343.1|	-	0.11	12.0	2.4	59	3.2	0.0	4.6	5	0	0	5	5	5	0	SHNi-TPR
SL4P	PF17618.2	gi|84490111|ref|YP_448343.1|	-	1.5	8.9	5.3	0.3	11.2	0.2	2.5	3	0	0	3	3	2	0	Uncharacterized	Strongylid	L4	protein
Radical_SAM	PF04055.21	gi|84490112|ref|YP_448344.1|	-	1.9e-16	60.9	0.1	3.6e-16	60.0	0.1	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|84490112|ref|YP_448344.1|	-	1.3e-12	48.2	0.0	7.9e-12	45.6	0.0	2.1	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|84490112|ref|YP_448344.1|	-	1.2e-08	35.1	0.1	5.3e-08	33.0	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Hexapep	PF00132.24	gi|84490113|ref|YP_448345.1|	-	5.1e-20	70.4	15.5	6.8e-08	31.9	1.9	4.3	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|84490113|ref|YP_448345.1|	-	2.2e-10	40.1	17.5	8.6e-07	28.6	6.0	4.1	2	2	2	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
DUF4954	PF16314.5	gi|84490113|ref|YP_448345.1|	-	0.0036	15.5	0.9	0.0056	14.9	0.9	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
Fucokinase	PF07959.12	gi|84490113|ref|YP_448345.1|	-	0.0047	15.9	0.1	0.005	15.8	0.1	1.3	1	0	0	1	1	1	1	L-fucokinase
Pepsin-I3	PF06394.13	gi|84490113|ref|YP_448345.1|	-	0.022	14.9	0.2	0.67	10.2	0.0	2.7	1	1	1	2	2	2	0	Pepsin	inhibitor-3-like	repeated	domain
Aminotran_1_2	PF00155.21	gi|84490114|ref|YP_448346.1|	-	8.8e-58	196.2	0.0	1.1e-57	195.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|84490114|ref|YP_448346.1|	-	7.2e-14	51.5	0.3	3.1e-10	39.5	0.1	2.1	2	0	0	2	2	2	2	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|84490114|ref|YP_448346.1|	-	7.6e-09	34.6	0.1	1.1e-08	34.0	0.1	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.13	gi|84490114|ref|YP_448346.1|	-	4.6e-06	25.7	0.4	2e-05	23.7	0.2	1.9	1	1	0	2	2	2	1	Allinase
DegT_DnrJ_EryC1	PF01041.17	gi|84490114|ref|YP_448346.1|	-	0.00016	21.1	0.1	0.00027	20.4	0.1	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
HyaE	PF07449.11	gi|84490114|ref|YP_448346.1|	-	0.1	12.6	0.1	0.33	10.9	0.0	1.9	2	0	0	2	2	2	0	Hydrogenase-1	expression	protein	HyaE
Sigma70_r4	PF04545.16	gi|84490114|ref|YP_448346.1|	-	0.15	11.6	0.1	0.4	10.2	0.1	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
PvlArgDC	PF01862.16	gi|84490115|ref|YP_448347.1|	-	1.9e-33	115.5	0.0	2.1e-33	115.4	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
Lon_C	PF05362.13	gi|84490116|ref|YP_448348.1|	-	8.9e-84	280.1	0.6	4.8e-83	277.7	0.5	2.1	2	0	0	2	2	2	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA	PF00004.29	gi|84490116|ref|YP_448348.1|	-	2.9e-20	73.0	0.0	8.4e-20	71.5	0.0	1.8	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
LON_substr_bdg	PF02190.16	gi|84490116|ref|YP_448348.1|	-	1.7e-13	50.9	6.0	1.7e-13	50.9	6.0	2.4	2	1	0	2	2	2	1	ATP-dependent	protease	La	(LON)	substrate-binding	domain
ChlI	PF13541.6	gi|84490116|ref|YP_448348.1|	-	4.5e-11	42.7	0.3	9.4e-11	41.6	0.3	1.6	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
AAA_5	PF07728.14	gi|84490116|ref|YP_448348.1|	-	7.5e-10	38.9	0.0	1.5e-08	34.7	0.0	3.1	4	0	0	4	4	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|84490116|ref|YP_448348.1|	-	1.3e-06	28.9	0.0	1.3e-05	25.7	0.0	2.5	2	1	1	3	3	2	1	AAA	ATPase	domain
AAA_PrkA	PF08298.11	gi|84490116|ref|YP_448348.1|	-	5.6e-06	25.5	0.0	1.3e-05	24.3	0.0	1.6	1	0	0	1	1	1	1	PrkA	AAA	domain
RuvB_N	PF05496.12	gi|84490116|ref|YP_448348.1|	-	4.1e-05	23.4	3.5	0.0018	18.1	0.0	3.8	5	0	0	5	5	3	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
IstB_IS21	PF01695.17	gi|84490116|ref|YP_448348.1|	-	5.8e-05	22.9	0.0	0.00084	19.1	0.0	2.5	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_22	PF13401.6	gi|84490116|ref|YP_448348.1|	-	6.1e-05	23.3	0.1	0.00093	19.5	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|84490116|ref|YP_448348.1|	-	0.0028	17.8	0.0	0.0069	16.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|84490116|ref|YP_448348.1|	-	0.0043	17.6	0.8	0.41	11.2	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
AAA_7	PF12775.7	gi|84490116|ref|YP_448348.1|	-	0.04	13.4	0.0	0.12	11.9	0.0	1.8	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NTPase_1	PF03266.15	gi|84490116|ref|YP_448348.1|	-	0.043	13.7	0.1	3.6	7.5	0.0	2.9	1	1	1	2	2	2	0	NTPase
AAA_30	PF13604.6	gi|84490116|ref|YP_448348.1|	-	0.052	13.3	0.1	0.12	12.0	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|84490116|ref|YP_448348.1|	-	0.055	13.9	0.0	0.23	11.9	0.0	2.1	2	0	0	2	2	2	0	RNA	helicase
DUF815	PF05673.13	gi|84490116|ref|YP_448348.1|	-	0.055	12.6	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
RsgA_GTPase	PF03193.16	gi|84490116|ref|YP_448348.1|	-	0.064	13.1	0.0	0.2	11.5	0.0	1.8	1	0	0	1	1	1	0	RsgA	GTPase
AAA_25	PF13481.6	gi|84490116|ref|YP_448348.1|	-	0.13	11.8	0.4	1.8	8.1	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
ASD1	PF08688.10	gi|84490116|ref|YP_448348.1|	-	0.15	12.5	0.4	0.33	11.3	0.4	1.5	1	0	0	1	1	1	0	Apx/Shroom	domain	ASD1
SKI	PF01202.22	gi|84490116|ref|YP_448348.1|	-	0.15	12.2	3.4	1.5	8.9	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
Mg_chelatase	PF01078.21	gi|84490116|ref|YP_448348.1|	-	0.17	11.3	0.2	0.48	9.8	0.1	1.8	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
ABC_tran	PF00005.27	gi|84490116|ref|YP_448348.1|	-	0.24	11.9	3.5	0.33	11.5	0.0	2.7	3	0	0	3	3	2	0	ABC	transporter
AAA_11	PF13086.6	gi|84490116|ref|YP_448348.1|	-	0.32	10.7	6.6	0.94	9.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Inositol_P	PF00459.25	gi|84490117|ref|YP_448349.1|	-	3e-30	105.7	0.2	4.6e-30	105.0	0.2	1.3	1	1	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.20	gi|84490117|ref|YP_448349.1|	-	1e-06	28.4	0.1	1.9e-06	27.5	0.1	1.5	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
Sigma70_r4_2	PF08281.12	gi|84490117|ref|YP_448349.1|	-	0.018	14.7	0.1	0.045	13.4	0.1	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
NAD_kinase	PF01513.21	gi|84490118|ref|YP_448350.1|	-	8.2e-61	205.7	0.2	3.4e-60	203.7	0.2	1.8	1	1	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|84490118|ref|YP_448350.1|	-	4e-05	23.2	0.0	7.2e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
Mur_ligase_M	PF08245.12	gi|84490119|ref|YP_448351.1|	-	1.8e-10	41.1	1.2	3.4e-10	40.2	1.2	1.5	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Porphobil_deam	PF01379.20	gi|84490120|ref|YP_448352.1|	-	1.6e-70	236.7	0.0	2.2e-70	236.3	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.15	gi|84490120|ref|YP_448352.1|	-	1.5e-10	41.3	0.0	3.4e-10	40.1	0.0	1.7	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
GFO_IDH_MocA	PF01408.22	gi|84490121|ref|YP_448353.1|	-	1e-24	87.7	0.3	1.9e-24	86.8	0.3	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.17	gi|84490121|ref|YP_448353.1|	-	1.3e-06	28.4	0.0	3.2e-06	27.1	0.0	1.7	1	1	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
CoA_binding	PF02629.19	gi|84490121|ref|YP_448353.1|	-	0.0038	17.9	3.2	0.0041	17.8	0.8	2.3	2	1	0	2	2	2	1	CoA	binding	domain
NAD_binding_2	PF03446.15	gi|84490121|ref|YP_448353.1|	-	0.056	13.6	0.4	0.11	12.7	0.4	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pribosyltran	PF00156.27	gi|84490122|ref|YP_448354.1|	-	1.8e-18	66.6	1.3	2.5e-18	66.1	1.3	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|84490122|ref|YP_448354.1|	-	6.9e-06	25.6	0.7	1e-05	25.1	0.7	1.5	1	1	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|84490122|ref|YP_448354.1|	-	0.00043	19.8	1.1	0.00076	19.0	0.3	1.7	1	1	0	2	2	2	1	Phosphoribosyl	transferase
HTH_24	PF13412.6	gi|84490122|ref|YP_448354.1|	-	0.0095	15.5	0.7	0.03	13.9	0.0	2.2	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
GerE	PF00196.19	gi|84490122|ref|YP_448354.1|	-	0.011	15.2	1.1	0.023	14.2	0.1	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Nucleo_LEF-12	PF06256.11	gi|84490122|ref|YP_448354.1|	-	0.012	15.4	0.0	0.02	14.7	0.0	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	LEF-12	protein
TFIIE_beta	PF02186.15	gi|84490122|ref|YP_448354.1|	-	0.021	15.1	0.6	0.68	10.3	0.2	2.4	2	1	0	2	2	2	0	TFIIE	beta	subunit	core	domain
HTH_7	PF02796.15	gi|84490122|ref|YP_448354.1|	-	0.025	14.6	0.1	0.045	13.8	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.6	gi|84490122|ref|YP_448354.1|	-	0.085	12.7	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_11	PF08279.12	gi|84490122|ref|YP_448354.1|	-	0.088	12.8	0.1	0.19	11.7	0.1	1.5	1	0	0	1	1	1	0	HTH	domain
MarR_2	PF12802.7	gi|84490122|ref|YP_448354.1|	-	0.11	12.4	0.0	0.28	11.1	0.0	1.7	1	0	0	1	1	1	0	MarR	family
HTH_10	PF04967.12	gi|84490122|ref|YP_448354.1|	-	0.16	11.8	0.0	0.35	10.7	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_17	PF12728.7	gi|84490122|ref|YP_448354.1|	-	0.18	12.0	0.0	0.35	11.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
eIF-1a	PF01176.19	gi|84490123|ref|YP_448355.1|	-	7e-23	80.2	0.7	1.1e-22	79.6	0.7	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
SBF	PF01758.16	gi|84490124|ref|YP_448356.1|	-	5.6e-21	75.1	12.4	5.6e-21	75.1	12.4	2.3	1	1	1	2	2	2	1	Sodium	Bile	acid	symporter	family
SBF_like	PF13593.6	gi|84490124|ref|YP_448356.1|	-	7.4e-14	51.8	19.1	9.9e-14	51.4	19.1	1.1	1	0	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
RIO1	PF01163.22	gi|84490125|ref|YP_448357.1|	-	1.5e-55	187.8	0.2	1.5e-55	187.8	0.2	1.5	2	0	0	2	2	2	1	RIO1	family
Pkinase	PF00069.25	gi|84490125|ref|YP_448357.1|	-	0.00084	18.8	2.3	0.00088	18.7	0.4	2.1	2	1	0	2	2	2	1	Protein	kinase	domain
APH	PF01636.23	gi|84490125|ref|YP_448357.1|	-	0.0014	18.6	0.1	0.02	14.8	0.1	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Kdo	PF06293.14	gi|84490125|ref|YP_448357.1|	-	0.0053	16.1	0.2	0.63	9.4	0.0	2.3	2	0	0	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Fructosamin_kin	PF03881.14	gi|84490125|ref|YP_448357.1|	-	0.045	12.9	0.1	0.86	8.7	0.0	2.1	1	1	1	2	2	2	0	Fructosamine	kinase
DUF5065	PF16723.5	gi|84490125|ref|YP_448357.1|	-	0.082	13.0	0.1	0.19	11.8	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5065)
KH_1	PF00013.29	gi|84490126|ref|YP_448358.1|	-	4e-09	36.2	5.9	0.00081	19.2	2.1	2.4	2	0	0	2	2	2	2	KH	domain
KH_8	PF17903.1	gi|84490126|ref|YP_448358.1|	-	5.7e-07	29.5	0.2	1.5e-06	28.2	0.0	1.8	2	0	0	2	2	2	1	Krr1	KH1	domain
KH_4	PF13083.6	gi|84490126|ref|YP_448358.1|	-	0.068	13.0	5.0	4.3	7.3	1.5	3.2	2	1	1	3	3	3	0	KH	domain
KH_2	PF07650.17	gi|84490126|ref|YP_448358.1|	-	0.46	10.4	8.6	1.8	8.4	1.0	3.4	2	1	1	3	3	3	0	KH	domain
Topo-VIb_trans	PF09239.11	gi|84490127|ref|YP_448359.1|	-	4.6e-58	195.6	0.1	7.5e-58	194.9	0.1	1.3	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.26	gi|84490127|ref|YP_448359.1|	-	1e-09	38.9	0.0	2.8e-09	37.4	0.0	1.8	1	1	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.6	gi|84490127|ref|YP_448359.1|	-	1.1e-05	25.3	0.0	2.6e-05	24.1	0.0	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PBCV_basic_adap	PF08789.10	gi|84490127|ref|YP_448359.1|	-	0.019	15.0	0.0	0.041	14.0	0.0	1.5	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
TP6A_N	PF04406.14	gi|84490128|ref|YP_448360.1|	-	8e-16	57.8	0.0	1.4e-15	57.0	0.0	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
IMS_HHH	PF11798.8	gi|84490128|ref|YP_448360.1|	-	0.14	12.5	0.1	5.3	7.6	0.0	2.5	2	0	0	2	2	2	0	IMS	family	HHH	motif
DUF5518	PF17647.1	gi|84490129|ref|YP_448361.1|	-	0.28	11.3	13.2	0.38	10.9	13.2	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5518)
CPP1-like	PF11833.8	gi|84490129|ref|YP_448361.1|	-	0.66	9.6	9.4	0.82	9.3	9.4	1.1	1	0	0	1	1	1	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
DUF3341	PF11821.8	gi|84490129|ref|YP_448361.1|	-	2.5	7.7	8.1	2.4	7.8	7.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3341)
DUF5518	PF17647.1	gi|84490130|ref|YP_448362.1|	-	2.6e-05	24.4	17.7	4.1e-05	23.7	17.7	1.4	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
TIM21	PF08294.11	gi|84490130|ref|YP_448362.1|	-	0.12	12.3	0.3	0.12	12.3	0.3	2.4	2	1	1	3	3	3	0	TIM21
Phage_holin_3_5	PF16085.5	gi|84490130|ref|YP_448362.1|	-	0.32	11.1	3.7	0.73	10.0	0.1	2.4	2	1	0	2	2	2	0	Bacteriophage	holin	Hol,	superfamily	III
UPF0154	PF03672.13	gi|84490130|ref|YP_448362.1|	-	0.45	10.6	0.2	0.45	10.6	0.2	2.1	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
Pam17	PF08566.10	gi|84490130|ref|YP_448362.1|	-	0.53	10.1	1.9	0.46	10.3	0.8	1.5	1	1	0	1	1	1	0	Mitochondrial	import	protein	Pam17
Glyco_trans_1_4	PF13692.6	gi|84490131|ref|YP_448363.1|	-	0.00016	22.1	0.0	0.00029	21.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84490131|ref|YP_448363.1|	-	0.00048	19.7	0.1	0.0011	18.5	0.1	1.7	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Epimerase_2	PF02350.19	gi|84490131|ref|YP_448363.1|	-	0.00057	18.8	0.1	0.00096	18.1	0.1	1.4	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_transf_28	PF03033.20	gi|84490131|ref|YP_448363.1|	-	0.00092	19.3	0.3	0.0017	18.4	0.3	1.4	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
Fe-ADH	PF00465.19	gi|84490131|ref|YP_448363.1|	-	0.097	11.5	2.0	0.31	9.8	1.4	1.9	2	0	0	2	2	2	0	Iron-containing	alcohol	dehydrogenase
Acyl_transf_3	PF01757.22	gi|84490132|ref|YP_448364.1|	-	3.4e-28	98.7	42.6	4.3e-28	98.4	42.6	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF5518	PF17647.1	gi|84490133|ref|YP_448365.1|	-	5.2e-11	42.7	22.4	6.1e-11	42.5	22.4	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
Transgly_assoc	PF04226.13	gi|84490133|ref|YP_448365.1|	-	0.0069	16.6	6.9	0.42	10.9	0.2	2.6	2	0	0	2	2	2	2	Transglycosylase	associated	protein
Gly-zipper_Omp	PF13488.6	gi|84490133|ref|YP_448365.1|	-	0.014	15.3	3.1	0.88	9.6	0.3	2.3	2	0	0	2	2	2	0	Glycine	zipper
LrgA	PF03788.14	gi|84490133|ref|YP_448365.1|	-	0.073	13.0	9.2	0.095	12.7	6.5	2.3	2	1	1	3	3	3	0	LrgA	family
Yip1	PF04893.17	gi|84490133|ref|YP_448365.1|	-	0.078	12.7	18.3	0.12	12.1	18.3	1.2	1	0	0	1	1	1	0	Yip1	domain
5TM-5TMR_LYT	PF07694.12	gi|84490133|ref|YP_448365.1|	-	0.11	12.0	14.7	0.17	11.4	14.7	1.3	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
CitMHS	PF03600.16	gi|84490133|ref|YP_448365.1|	-	1	8.5	10.9	1.4	8.0	10.9	1.1	1	0	0	1	1	1	0	Citrate	transporter
DUF4229	PF14012.6	gi|84490133|ref|YP_448365.1|	-	3.6	7.8	9.6	4.2	7.5	1.9	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4229)
DUF2070	PF09843.9	gi|84490133|ref|YP_448365.1|	-	4	5.6	12.1	4.5	5.4	12.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
CPP1-like	PF11833.8	gi|84490133|ref|YP_448365.1|	-	5.4	6.6	8.8	7	6.2	8.8	1.1	1	0	0	1	1	1	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
Gp_dh_C	PF02800.20	gi|84490134|ref|YP_448366.1|	-	1.8e-28	99.1	0.1	2.6e-28	98.6	0.1	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|84490134|ref|YP_448366.1|	-	1.1e-08	35.2	0.1	2.9e-08	33.9	0.1	1.7	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.24	gi|84490134|ref|YP_448366.1|	-	2.1e-07	31.2	0.1	1.1e-06	28.8	0.1	2.3	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.16	gi|84490134|ref|YP_448366.1|	-	6.1e-05	23.6	0.1	0.0028	18.3	0.0	2.6	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|84490134|ref|YP_448366.1|	-	0.00067	19.1	0.3	0.0055	16.1	0.3	2.2	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|84490134|ref|YP_448366.1|	-	0.0017	18.6	0.1	0.0049	17.1	0.1	1.8	1	0	0	1	1	1	1	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|84490134|ref|YP_448366.1|	-	0.006	16.8	0.0	0.011	16.0	0.0	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
GFO_IDH_MocA	PF01408.22	gi|84490134|ref|YP_448366.1|	-	0.045	14.6	0.0	0.12	13.2	0.0	1.8	1	1	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
F420_oxidored	PF03807.17	gi|84490134|ref|YP_448366.1|	-	0.1	13.2	0.3	0.4	11.3	0.1	2.1	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Saccharop_dh_N	PF04455.12	gi|84490135|ref|YP_448367.1|	-	6e-32	110.0	0.4	1.5e-31	108.8	0.4	1.7	1	0	0	1	1	1	1	LOR/SDH	bifunctional	enzyme	conserved	region
DS	PF01916.17	gi|84490135|ref|YP_448367.1|	-	0.0029	16.9	1.9	0.017	14.4	0.1	2.6	2	1	1	3	3	3	1	Deoxyhypusine	synthase
TPP_enzyme_M	PF00205.22	gi|84490135|ref|YP_448367.1|	-	0.067	12.9	0.1	0.19	11.5	0.1	1.7	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	central	domain
Chlam_PMP	PF02415.17	gi|84490136|ref|YP_448368.1|	-	2.5e-08	33.9	76.9	0.0033	17.8	0.6	11.7	13	0	0	13	13	13	9	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DUF2312	PF10073.9	gi|84490136|ref|YP_448368.1|	-	0.0048	16.5	0.0	0.028	14.1	0.0	2.2	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Metallophos	PF00149.28	gi|84490137|ref|YP_448369.1|	-	8.6e-10	39.4	4.4	2.8e-09	37.8	4.4	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84490137|ref|YP_448369.1|	-	2.6e-06	27.7	0.0	4.4e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF5314	PF17241.2	gi|84490137|ref|YP_448369.1|	-	0.083	12.5	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5314)
Aldo_ket_red	PF00248.21	gi|162316920|ref|YP_448370.2|	-	7.7e-40	136.9	0.1	5.9e-38	130.7	0.1	2.1	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|162316920|ref|YP_448370.2|	-	8.7e-09	35.8	7.5	2.3e-08	34.4	7.5	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|162316920|ref|YP_448370.2|	-	2.4e-08	34.0	7.4	5.6e-08	32.8	7.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|162316920|ref|YP_448370.2|	-	0.0025	18.0	4.2	0.52	10.5	0.1	2.7	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|162316920|ref|YP_448370.2|	-	0.0027	18.1	8.3	0.0084	16.5	8.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|162316920|ref|YP_448370.2|	-	0.057	13.5	13.3	0.32	11.1	2.8	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
HDNR	PF15115.6	gi|162316920|ref|YP_448370.2|	-	0.064	13.5	0.1	0.34	11.1	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	with	conserved	HDNR	motif
Fer4_16	PF13484.6	gi|162316920|ref|YP_448370.2|	-	0.16	12.9	8.7	0.28	12.1	1.3	2.7	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|162316920|ref|YP_448370.2|	-	0.3	11.7	14.2	0.43	11.2	4.2	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|162316920|ref|YP_448370.2|	-	0.99	10.0	14.2	2	9.1	3.7	2.4	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|162316920|ref|YP_448370.2|	-	0.99	9.3	17.2	0.093	12.6	3.5	3.0	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|162316920|ref|YP_448370.2|	-	1.5	9.1	18.3	0.14	12.3	3.2	2.8	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|162316920|ref|YP_448370.2|	-	7.3	6.4	11.5	0.99	9.2	0.6	3.1	2	1	1	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
GyrI-like	PF06445.15	gi|84490139|ref|YP_448371.1|	-	5.7e-14	52.7	0.3	8.1e-14	52.2	0.3	1.2	1	0	0	1	1	1	1	GyrI-like	small	molecule	binding	domain
eIF-5a	PF01287.20	gi|84490140|ref|YP_448372.1|	-	4.5e-10	39.5	1.0	7.1e-10	38.8	1.0	1.3	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP	PF01132.20	gi|84490140|ref|YP_448372.1|	-	0.025	14.6	0.1	0.038	14.0	0.1	1.4	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
CsgG	PF03783.14	gi|84490140|ref|YP_448372.1|	-	0.054	12.8	0.2	0.063	12.5	0.2	1.1	1	0	0	1	1	1	0	Curli	production	assembly/transport	component	CsgG
Shisa	PF13908.6	gi|84490141|ref|YP_448373.1|	-	0.0012	19.1	1.0	0.0015	18.8	1.0	1.2	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
DUF4834	PF16118.5	gi|84490141|ref|YP_448373.1|	-	0.0059	17.5	3.1	0.0059	17.5	3.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4834)
Tmemb_9	PF05434.11	gi|84490141|ref|YP_448373.1|	-	0.021	14.7	0.1	0.027	14.4	0.1	1.1	1	0	0	1	1	1	0	TMEM9
Cytochrom_C_asm	PF01578.20	gi|84490141|ref|YP_448373.1|	-	0.051	13.3	0.1	0.062	13.1	0.1	1.1	1	0	0	1	1	1	0	Cytochrome	C	assembly	protein
SID-1_RNA_chan	PF13965.6	gi|84490141|ref|YP_448373.1|	-	0.059	11.8	0.2	0.065	11.6	0.2	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
NB	PF04159.13	gi|84490141|ref|YP_448373.1|	-	0.069	13.2	3.2	0.11	12.6	3.3	1.4	1	1	0	1	1	1	0	NB	glycoprotein
Prominin	PF05478.11	gi|84490141|ref|YP_448373.1|	-	0.094	10.7	1.8	0.11	10.4	1.8	1.0	1	0	0	1	1	1	0	Prominin
Pex14_N	PF04695.13	gi|84490141|ref|YP_448373.1|	-	0.16	12.7	4.7	0.18	12.5	4.7	1.2	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
Zip	PF02535.22	gi|84490141|ref|YP_448373.1|	-	0.24	10.6	0.0	0.25	10.5	0.0	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
BioY	PF02632.14	gi|84490142|ref|YP_448374.1|	-	2.6e-32	111.7	20.2	2.6e-32	111.7	20.2	1.6	1	1	0	1	1	1	1	BioY	family
ECF_trnsprt	PF12822.7	gi|84490142|ref|YP_448374.1|	-	0.0012	18.9	30.7	0.0021	18.2	30.8	1.3	1	1	0	1	1	1	1	ECF	transporter,	substrate-specific	component
Phage_integrase	PF00589.22	gi|84490143|ref|YP_448375.1|	-	1.4e-46	158.4	1.3	1.4e-46	158.4	1.3	1.4	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|84490143|ref|YP_448375.1|	-	5.5e-05	23.6	1.4	0.0003	21.2	1.4	2.3	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|84490143|ref|YP_448375.1|	-	0.0013	19.0	4.3	0.0013	19.0	4.3	2.4	2	1	0	2	2	2	1	Phage	integrase	SAM-like	domain
Phage_int_SAM_1	PF02899.17	gi|84490143|ref|YP_448375.1|	-	0.0042	17.3	1.8	0.016	15.5	0.4	2.7	2	2	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.7	gi|84490143|ref|YP_448375.1|	-	0.068	13.3	0.2	0.15	12.2	0.2	1.5	1	0	0	1	1	1	0	Integrase
Toprim_4	PF13662.6	gi|84490144|ref|YP_448376.1|	-	8e-11	42.3	0.2	2.5e-10	40.7	0.2	1.9	1	0	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.6	gi|84490144|ref|YP_448376.1|	-	6.1e-05	23.4	0.0	0.00019	21.8	0.0	1.9	1	0	0	1	1	1	1	Toprim-like
AAA_11	PF13086.6	gi|84490144|ref|YP_448376.1|	-	0.18	11.6	11.0	0.097	12.4	8.2	1.8	2	0	0	2	2	2	0	AAA	domain
Presenilin	PF01080.17	gi|84490144|ref|YP_448376.1|	-	1.3	7.7	10.4	1.8	7.2	10.4	1.1	1	0	0	1	1	1	0	Presenilin
Zip	PF02535.22	gi|84490144|ref|YP_448376.1|	-	1.5	7.9	9.8	2.1	7.5	9.8	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
Toprim	PF01751.22	gi|84490144|ref|YP_448376.1|	-	2	8.7	6.1	0.93	9.7	0.2	3.3	1	1	2	3	3	3	0	Toprim	domain
DUF4820	PF16091.5	gi|84490144|ref|YP_448376.1|	-	2.2	7.6	8.3	4.1	6.7	8.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4820)
DUF211	PF02680.14	gi|84490145|ref|YP_448377.1|	-	5e-38	129.1	0.5	5.6e-38	129.0	0.5	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
Cyanate_lyase	PF02560.14	gi|84490145|ref|YP_448377.1|	-	0.032	14.1	0.1	0.86	9.5	0.0	2.3	1	1	1	2	2	2	0	Cyanate	lyase	C-terminal	domain
RraA-like	PF03737.15	gi|84490146|ref|YP_448378.1|	-	3.9e-27	95.2	0.3	5e-27	94.9	0.3	1.1	1	0	0	1	1	1	1	Aldolase/RraA
Gar1	PF04410.14	gi|84490147|ref|YP_448379.1|	-	4.4e-17	62.3	0.1	4.7e-17	62.2	0.1	1.0	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
TFIIB	PF00382.19	gi|84490148|ref|YP_448380.1|	-	2.7e-42	142.7	0.4	3.9e-20	71.7	0.0	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|84490148|ref|YP_448380.1|	-	7.6e-20	70.2	1.3	7.6e-20	70.2	1.3	1.9	2	0	0	2	2	2	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.17	gi|84490148|ref|YP_448380.1|	-	0.00046	19.8	0.5	0.00087	18.9	0.5	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
Sigma70_r4	PF04545.16	gi|84490148|ref|YP_448380.1|	-	0.0014	18.1	0.1	0.096	12.2	0.1	2.5	2	0	0	2	2	2	1	Sigma-70,	region	4
DUF3797	PF12677.7	gi|84490148|ref|YP_448380.1|	-	0.0055	16.6	0.5	0.37	10.7	0.3	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3797)
zf-RING_7	PF02591.15	gi|84490148|ref|YP_448380.1|	-	0.01	16.0	0.4	8.3	6.7	0.0	2.8	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|84490148|ref|YP_448380.1|	-	0.012	16.0	0.7	0.13	12.7	0.4	2.2	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
HTH_Tnp_ISL3	PF13542.6	gi|84490148|ref|YP_448380.1|	-	0.02	14.3	0.0	0.17	11.3	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
A2L_zn_ribbon	PF08792.10	gi|84490148|ref|YP_448380.1|	-	0.022	14.5	0.7	0.047	13.4	0.7	1.6	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|84490148|ref|YP_448380.1|	-	0.029	14.3	0.7	0.076	12.9	0.7	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|84490148|ref|YP_448380.1|	-	0.032	13.6	3.4	0.2	11.1	3.4	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
HTH_Crp_2	PF13545.6	gi|84490148|ref|YP_448380.1|	-	0.033	14.2	0.2	10	6.2	0.0	3.2	3	1	0	3	3	3	0	Crp-like	helix-turn-helix	domain
zinc_ribbon_5	PF13719.6	gi|84490148|ref|YP_448380.1|	-	0.042	13.6	0.8	0.088	12.6	0.8	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
HTH_AsnC-type	PF13404.6	gi|84490148|ref|YP_448380.1|	-	0.051	13.4	0.1	0.26	11.1	0.0	2.2	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
zf-ISL3	PF14690.6	gi|84490148|ref|YP_448380.1|	-	0.055	14.1	3.0	2.2	9.0	0.6	3.2	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Cyclin_C	PF02984.19	gi|84490148|ref|YP_448380.1|	-	0.058	13.5	0.0	0.86	9.7	0.0	2.1	2	0	0	2	2	2	0	Cyclin,	C-terminal	domain
Auto_anti-p27	PF06677.12	gi|84490148|ref|YP_448380.1|	-	0.07	13.3	3.6	0.17	12.1	1.4	2.2	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
RPA_interact_C	PF14768.6	gi|84490148|ref|YP_448380.1|	-	0.076	13.6	0.1	3.3	8.4	0.0	2.3	2	0	0	2	2	2	0	Replication	protein	A	interacting	C-terminal
RB_B	PF01857.20	gi|84490148|ref|YP_448380.1|	-	0.14	12.2	0.0	0.26	11.3	0.0	1.4	1	0	0	1	1	1	0	Retinoblastoma-associated	protein	B	domain
DZR	PF12773.7	gi|84490148|ref|YP_448380.1|	-	0.17	11.9	1.1	0.56	10.3	0.4	2.0	2	0	0	2	2	2	0	Double	zinc	ribbon
UPF0181	PF03701.14	gi|84490148|ref|YP_448380.1|	-	0.17	11.5	0.0	0.33	10.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0181)
Zn-ribbon_8	PF09723.10	gi|84490148|ref|YP_448380.1|	-	1.4	9.1	6.8	0.38	10.9	0.9	2.6	2	1	2	4	4	4	0	Zinc	ribbon	domain
DUF2116	PF09889.9	gi|84490149|ref|YP_448381.1|	-	3.3e-29	100.6	3.5	3.7e-29	100.5	3.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF3671	PF12420.8	gi|84490149|ref|YP_448381.1|	-	0.0038	17.3	0.3	0.0043	17.1	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function
PDR_CDR	PF06422.12	gi|84490149|ref|YP_448381.1|	-	0.0043	16.9	0.3	0.0055	16.6	0.3	1.3	1	1	0	1	1	1	1	CDR	ABC	transporter
DUF2093	PF09866.9	gi|84490149|ref|YP_448381.1|	-	0.024	14.0	0.3	0.034	13.6	0.3	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2093)
DZR	PF12773.7	gi|84490149|ref|YP_448381.1|	-	0.039	14.0	2.0	0.15	12.1	1.6	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
T2SSF	PF00482.23	gi|84490149|ref|YP_448381.1|	-	0.044	13.7	0.0	0.049	13.6	0.0	1.1	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	F
DUF2615	PF11027.8	gi|84490149|ref|YP_448381.1|	-	0.054	13.6	0.1	0.063	13.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2615)
zf-MYND	PF01753.18	gi|84490149|ref|YP_448381.1|	-	0.054	13.6	2.5	0.079	13.1	2.5	1.3	1	0	0	1	1	1	0	MYND	finger
zinc_ribbon_2	PF13240.6	gi|84490149|ref|YP_448381.1|	-	0.067	12.9	0.5	0.067	12.9	0.5	1.7	2	0	0	2	2	2	0	zinc-ribbon	domain
LPAM_1	PF08139.12	gi|84490149|ref|YP_448381.1|	-	0.21	12.2	1.1	0.42	11.2	1.1	1.5	1	0	0	1	1	1	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
DpnI	PF06044.12	gi|84490149|ref|YP_448381.1|	-	0.21	11.2	2.2	0.32	10.6	2.2	1.3	1	1	0	1	1	1	0	Dam-replacing	family
DUF2256	PF10013.9	gi|84490149|ref|YP_448381.1|	-	0.29	11.3	4.8	6.1	7.0	0.2	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
AA_kinase	PF00696.28	gi|84490150|ref|YP_448382.1|	-	8.8e-33	113.9	1.1	1.4e-32	113.2	1.1	1.3	1	1	0	1	1	1	1	Amino	acid	kinase	family
DUF637	PF04830.13	gi|84490150|ref|YP_448382.1|	-	0.087	12.6	0.2	0.11	12.3	0.2	1.3	1	0	0	1	1	1	0	Possible	hemagglutinin	(DUF637)
eRF1_2	PF03464.15	gi|84490151|ref|YP_448383.1|	-	5.3e-44	149.8	0.0	1.1e-43	148.8	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|84490151|ref|YP_448383.1|	-	1e-32	112.9	0.7	2.8e-32	111.5	0.4	1.9	2	0	0	2	2	1	1	eRF1	domain	3
eRF1_1	PF03463.15	gi|84490151|ref|YP_448383.1|	-	4.6e-14	52.5	0.0	9e-14	51.6	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	1
baeRF_family10	PF18854.1	gi|84490151|ref|YP_448383.1|	-	8.5e-14	52.0	0.0	1.7e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
acVLRF1	PF18859.1	gi|84490151|ref|YP_448383.1|	-	9.4e-14	51.8	0.0	2.7e-13	50.4	0.0	1.7	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
Zn-ribbon_8	PF09723.10	gi|84490151|ref|YP_448383.1|	-	0.0064	16.6	1.8	0.0064	16.6	1.8	2.5	2	0	0	2	2	2	1	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|84490151|ref|YP_448383.1|	-	0.0076	15.6	1.7	2.1	7.9	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Ogr_Delta	PF04606.12	gi|84490151|ref|YP_448383.1|	-	0.032	14.2	2.5	0.13	12.3	0.1	2.4	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
RbpA	PF13397.6	gi|84490151|ref|YP_448383.1|	-	0.039	14.6	0.2	0.11	13.1	0.2	1.7	1	0	0	1	1	1	0	RNA	polymerase-binding	protein
DZR	PF12773.7	gi|84490151|ref|YP_448383.1|	-	0.073	13.1	2.4	0.15	12.1	2.4	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_10	PF10058.9	gi|84490151|ref|YP_448383.1|	-	0.12	12.2	0.3	0.31	10.8	0.3	1.8	1	0	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf_UBZ	PF18439.1	gi|84490151|ref|YP_448383.1|	-	0.25	11.0	4.2	6.6	6.4	0.7	2.5	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zinc-ribbons_6	PF07191.12	gi|84490151|ref|YP_448383.1|	-	0.27	11.3	1.8	0.72	9.9	1.8	1.7	1	0	0	1	1	1	0	zinc-ribbons
Anti-TRAP	PF15777.5	gi|84490151|ref|YP_448383.1|	-	0.3	11.1	2.0	3.8	7.5	0.0	2.4	1	1	1	2	2	2	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Mut7-C	PF01927.16	gi|84490151|ref|YP_448383.1|	-	0.36	10.9	4.2	3.9	7.6	4.3	2.4	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
zf_C2H2_10	PF18414.1	gi|84490151|ref|YP_448383.1|	-	0.53	9.9	3.6	1.7	8.2	0.8	2.3	2	0	0	2	2	2	0	C2H2	type	zinc-finger
zf-TFIIB	PF13453.6	gi|84490151|ref|YP_448383.1|	-	0.57	9.5	4.5	2	7.8	0.4	2.3	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
zf-HIT	PF04438.16	gi|84490151|ref|YP_448383.1|	-	3.6	7.5	7.0	3.8	7.5	0.9	2.3	2	0	0	2	2	2	0	HIT	zinc	finger
DUF2387	PF09526.10	gi|84490151|ref|YP_448383.1|	-	5.1	7.3	7.9	0.45	10.7	2.7	2.0	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_S10	PF00338.22	gi|84490152|ref|YP_448384.1|	-	1.8e-26	92.2	0.0	2e-26	92.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
PriA_C	PF18074.1	gi|84490152|ref|YP_448384.1|	-	0.014	16.2	0.0	0.026	15.3	0.0	1.5	2	0	0	2	2	2	0	Primosomal	protein	N	C-terminal	domain
GTP_EFTU	PF00009.27	gi|84490153|ref|YP_448385.1|	-	4.8e-58	195.9	0.1	5.9e-58	195.6	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|84490153|ref|YP_448385.1|	-	1.9e-35	121.5	0.0	4.5e-35	120.4	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|84490153|ref|YP_448385.1|	-	2.2e-13	50.4	1.2	4.5e-13	49.4	1.2	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|84490153|ref|YP_448385.1|	-	2.1e-08	34.2	0.1	1.5e-06	28.3	0.0	2.6	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|84490153|ref|YP_448385.1|	-	0.00043	19.9	0.5	0.01	15.3	0.2	2.9	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
GTP_EFTU_D4	PF14578.6	gi|84490153|ref|YP_448385.1|	-	0.0014	18.4	1.2	0.0041	17.0	1.2	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
RsgA_GTPase	PF03193.16	gi|84490153|ref|YP_448385.1|	-	0.0041	17.0	0.6	0.36	10.7	0.1	2.4	1	1	1	2	2	2	1	RsgA	GTPase
Septin	PF00735.18	gi|84490153|ref|YP_448385.1|	-	0.047	13.0	0.0	0.078	12.2	0.0	1.3	1	0	0	1	1	1	0	Septin
G-alpha	PF00503.20	gi|84490153|ref|YP_448385.1|	-	0.072	12.2	0.0	4.6	6.3	0.0	2.2	1	1	1	2	2	2	0	G-protein	alpha	subunit
Dynamin_N	PF00350.23	gi|84490153|ref|YP_448385.1|	-	0.13	12.4	0.1	18	5.3	0.0	2.3	1	1	1	2	2	2	0	Dynamin	family
Gtr1_RagA	PF04670.12	gi|84490153|ref|YP_448385.1|	-	0.14	11.5	0.0	1.1	8.6	0.0	2.0	1	1	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
ATP_bind_1	PF03029.17	gi|84490153|ref|YP_448385.1|	-	0.15	11.9	0.0	0.67	9.7	0.0	2.0	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
GTP_EFTU	PF00009.27	gi|84490154|ref|YP_448386.1|	-	2.9e-66	222.7	0.7	4.7e-66	222.0	0.7	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|84490154|ref|YP_448386.1|	-	3e-25	88.3	0.5	2.4e-24	85.4	0.1	2.7	2	1	1	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|84490154|ref|YP_448386.1|	-	1.5e-23	82.6	0.7	3.5e-23	81.5	0.4	1.8	2	0	0	2	2	2	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|84490154|ref|YP_448386.1|	-	4.6e-23	81.1	0.5	1.3e-22	79.6	0.1	2.1	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|84490154|ref|YP_448386.1|	-	1.1e-10	41.7	1.1	4.5e-10	39.8	1.1	2.1	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|84490154|ref|YP_448386.1|	-	0.00093	19.3	0.0	0.0025	17.9	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Regulator_TrmB	PF11495.8	gi|84490154|ref|YP_448386.1|	-	0.042	13.0	0.1	0.44	9.7	0.0	2.5	3	0	0	3	3	3	0	Archaeal	transcriptional	regulator	TrmB
RsgA_GTPase	PF03193.16	gi|84490154|ref|YP_448386.1|	-	0.18	11.7	0.3	0.57	10.1	0.2	1.9	2	0	0	2	2	2	0	RsgA	GTPase
Ribosomal_S7	PF00177.21	gi|84490155|ref|YP_448387.1|	-	3.9e-41	140.2	5.1	4.8e-41	139.9	5.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
PepSY_like	PF11396.8	gi|84490155|ref|YP_448387.1|	-	0.081	13.5	0.4	12	6.5	0.0	2.6	1	1	0	2	2	2	0	Putative	beta-lactamase-inhibitor-like,	PepSY-like
Ribosom_S12_S23	PF00164.25	gi|84490156|ref|YP_448388.1|	-	9.7e-48	160.5	0.2	1.2e-47	160.2	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.17	gi|84490157|ref|YP_448389.1|	-	4.3e-19	68.1	3.8	2.9e-15	55.9	0.5	2.2	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.6	gi|84490157|ref|YP_448389.1|	-	1e-12	47.9	1.0	1e-11	44.7	0.2	2.1	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.29	gi|84490157|ref|YP_448389.1|	-	1.2e-07	31.5	0.7	0.00081	19.2	0.1	2.4	2	0	0	2	2	2	2	KH	domain
KH_4	PF13083.6	gi|84490157|ref|YP_448389.1|	-	2.7e-07	30.4	0.7	0.00026	20.8	0.2	2.3	2	0	0	2	2	2	2	KH	domain
CinA_KH	PF18146.1	gi|84490157|ref|YP_448389.1|	-	0.11	12.7	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	Damage-inducible	protein	CinA	KH	domain
Ribosomal_L7Ae	PF01248.26	gi|84490158|ref|YP_448390.1|	-	3e-20	71.7	0.0	3.3e-20	71.6	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNA_pol_Rpb1_5	PF04998.17	gi|84490159|ref|YP_448391.1|	-	3.2e-55	187.4	4.9	5.3e-55	186.7	4.9	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_1	PF04997.12	gi|84490160|ref|YP_448392.1|	-	3.9e-103	345.1	0.0	6.8e-103	344.3	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|84490160|ref|YP_448392.1|	-	3.3e-72	242.1	0.2	6.9e-72	241.1	0.2	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_4	PF05000.17	gi|84490160|ref|YP_448392.1|	-	7.1e-31	106.4	0.0	1.7e-30	105.2	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_3	PF04983.18	gi|84490160|ref|YP_448392.1|	-	9.9e-30	103.6	0.0	3.3e-29	101.8	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_5	PF04998.17	gi|84490160|ref|YP_448392.1|	-	2.7e-29	102.4	0.0	5.5e-29	101.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
USP7_ICP0_bdg	PF12436.8	gi|84490160|ref|YP_448392.1|	-	0.027	13.8	0.0	0.049	12.9	0.0	1.3	1	0	0	1	1	1	0	ICP0-binding	domain	of	Ubiquitin-specific	protease	7
Sof1	PF04158.14	gi|84490160|ref|YP_448392.1|	-	0.15	12.4	0.3	0.42	10.9	0.3	1.7	1	0	0	1	1	1	0	Sof1-like	domain
RNA_pol_Rpb2_6	PF00562.28	gi|84490161|ref|YP_448393.1|	-	2.4e-132	441.7	0.1	3.1e-132	441.3	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_7	PF04560.20	gi|84490161|ref|YP_448393.1|	-	1.6e-29	102.1	0.1	2.9e-29	101.3	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.13	gi|84490161|ref|YP_448393.1|	-	5.9e-19	68.1	0.0	1.2e-18	67.1	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|84490161|ref|YP_448393.1|	-	1.9e-11	44.3	4.5	7e-11	42.5	4.5	2.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb2_45	PF10385.9	gi|84490161|ref|YP_448393.1|	-	0.12	12.6	4.3	0.28	11.5	0.2	3.3	4	0	0	4	4	4	0	RNA	polymerase	beta	subunit	external	1	domain
RNA_pol_Rpb2_1	PF04563.15	gi|84490162|ref|YP_448394.1|	-	1.2e-51	175.2	0.1	1.4e-51	174.9	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_3	PF04565.16	gi|84490162|ref|YP_448394.1|	-	3.6e-25	87.9	0.2	7.9e-25	86.8	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_2	PF04561.14	gi|84490162|ref|YP_448394.1|	-	6.4e-25	87.9	0.4	1e-24	87.2	0.4	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb5_C	PF01191.19	gi|84490163|ref|YP_448395.1|	-	1.8e-30	104.6	0.3	2e-30	104.5	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
Enkurin	PF13864.6	gi|84490163|ref|YP_448395.1|	-	0.073	13.5	0.0	0.073	13.5	0.0	1.2	1	0	0	1	1	1	0	Calmodulin-binding
PGK	PF00162.19	gi|84490164|ref|YP_448396.1|	-	1.9e-108	362.8	0.0	2.1e-108	362.6	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
TIM	PF00121.18	gi|84490165|ref|YP_448397.1|	-	4.3e-12	45.9	0.1	2.3e-10	40.3	0.0	2.1	1	1	1	2	2	2	1	Triosephosphate	isomerase
NMO	PF03060.15	gi|84490165|ref|YP_448397.1|	-	5e-05	22.9	0.1	8.5e-05	22.1	0.1	1.4	1	0	0	1	1	1	1	Nitronate	monooxygenase
ThiG	PF05690.14	gi|84490165|ref|YP_448397.1|	-	0.00019	20.8	0.5	0.00059	19.2	0.2	1.8	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
His_biosynth	PF00977.21	gi|84490165|ref|YP_448397.1|	-	0.00034	20.1	0.5	0.00088	18.8	0.2	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.18	gi|84490165|ref|YP_448397.1|	-	0.00059	19.0	0.0	0.0011	18.1	0.0	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Glu_synthase	PF01645.17	gi|84490165|ref|YP_448397.1|	-	0.002	17.3	0.0	0.0034	16.6	0.0	1.4	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
IGPS	PF00218.21	gi|84490165|ref|YP_448397.1|	-	0.015	14.5	0.1	0.028	13.6	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
B12-binding	PF02310.19	gi|84490165|ref|YP_448397.1|	-	0.11	12.5	0.0	0.3	11.1	0.0	1.7	1	1	0	1	1	1	0	B12	binding	domain
Hydrolase_like	PF13242.6	gi|84490165|ref|YP_448397.1|	-	0.14	12.3	0.0	0.65	10.1	0.0	2.0	2	0	0	2	2	2	0	HAD-hyrolase-like
Wyosine_form	PF08608.12	gi|84490166|ref|YP_448398.1|	-	8e-19	67.8	0.0	2e-18	66.5	0.0	1.7	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.21	gi|84490166|ref|YP_448398.1|	-	1.3e-17	64.6	0.2	3.9e-17	63.1	0.2	1.8	1	1	0	1	1	1	1	Radical	SAM	superfamily
Hydrolase	PF00702.26	gi|84490166|ref|YP_448398.1|	-	0.023	15.0	0.0	0.38	11.0	0.0	2.1	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Fer4_12	PF13353.6	gi|84490166|ref|YP_448398.1|	-	0.043	14.1	6.8	0.2	11.9	3.9	2.7	2	2	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|84490166|ref|YP_448398.1|	-	0.046	13.8	4.7	4.3	7.5	4.7	2.7	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF1002	PF06207.11	gi|84490167|ref|YP_448399.1|	-	6.8e-53	179.5	30.9	8.2e-53	179.2	30.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1002)
RelB_leu_zip	PF16180.5	gi|84490167|ref|YP_448399.1|	-	0.14	12.2	0.0	0.91	9.6	0.0	2.1	2	0	0	2	2	2	0	RelB	leucine	zipper
Fer4	PF00037.27	gi|84490168|ref|YP_448400.1|	-	1e-08	34.6	9.2	0.0001	22.0	3.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|84490168|ref|YP_448400.1|	-	1.2e-07	31.5	9.7	0.0017	18.3	0.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84490168|ref|YP_448400.1|	-	5.3e-07	29.7	10.3	1e-06	28.8	10.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84490168|ref|YP_448400.1|	-	6.1e-07	29.8	4.3	0.0025	18.2	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|84490168|ref|YP_448400.1|	-	1.1e-06	29.1	11.0	4.7e-06	27.1	10.8	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490168|ref|YP_448400.1|	-	2.5e-06	27.5	11.9	0.00057	20.0	2.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490168|ref|YP_448400.1|	-	5.5e-06	26.4	12.6	0.00011	22.2	13.5	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Flavodoxin_5	PF12724.7	gi|84490168|ref|YP_448400.1|	-	5.6e-06	26.6	0.4	1.3e-05	25.5	0.4	1.7	1	1	0	1	1	1	1	Flavodoxin	domain
Fer4_16	PF13484.6	gi|84490168|ref|YP_448400.1|	-	1.7e-05	25.7	17.5	0.00059	20.7	2.6	3.6	4	0	0	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Flavodoxin_1	PF00258.25	gi|84490168|ref|YP_448400.1|	-	9.2e-05	22.7	0.0	0.00012	22.3	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin
Fer4_17	PF13534.6	gi|84490168|ref|YP_448400.1|	-	0.00016	22.2	7.1	0.011	16.2	0.4	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|84490168|ref|YP_448400.1|	-	0.00018	22.3	8.7	0.0039	18.0	0.7	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84490168|ref|YP_448400.1|	-	0.00019	21.3	11.9	0.013	15.6	3.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84490168|ref|YP_448400.1|	-	0.0006	20.1	9.4	0.0084	16.5	1.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Flavodoxin_3	PF12641.7	gi|84490168|ref|YP_448400.1|	-	0.0023	17.6	1.7	0.0047	16.6	1.6	1.7	1	1	0	1	1	1	1	Flavodoxin	domain
Fer4_18	PF13746.6	gi|84490168|ref|YP_448400.1|	-	0.0096	16.1	10.4	0.54	10.5	8.4	3.1	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
MACPF	PF01823.19	gi|84490168|ref|YP_448400.1|	-	0.017	15.2	0.5	0.017	15.2	0.5	2.0	2	0	0	2	2	2	0	MAC/Perforin	domain
DUF3363	PF11843.8	gi|84490168|ref|YP_448400.1|	-	0.025	13.5	0.1	0.79	8.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3363)
Flavodoxin_NdrI	PF07972.11	gi|84490168|ref|YP_448400.1|	-	0.066	13.4	3.4	1.9	8.6	2.4	2.9	1	1	0	2	2	2	0	NrdI	Flavodoxin	like
Fer4_3	PF12798.7	gi|84490168|ref|YP_448400.1|	-	0.18	12.8	16.5	0.84	10.7	4.2	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|84490168|ref|YP_448400.1|	-	0.34	11.5	9.4	7.4	7.2	0.4	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
ATP-grasp_2	PF08442.10	gi|84490169|ref|YP_448401.1|	-	2e-62	210.3	1.7	3.6e-62	209.5	1.7	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.19	gi|84490169|ref|YP_448401.1|	-	7.6e-16	58.3	1.9	1.2e-15	57.6	0.3	1.9	2	0	0	2	2	2	1	CoA-ligase
ATP-grasp_5	PF13549.6	gi|84490169|ref|YP_448401.1|	-	5.1e-12	45.7	0.2	9.4e-12	44.9	0.2	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|84490169|ref|YP_448401.1|	-	1.4e-05	25.0	0.3	2.9e-05	23.9	0.3	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
CPSase_L_D2	PF02786.17	gi|84490169|ref|YP_448401.1|	-	0.00011	21.8	0.6	0.00086	18.9	0.2	2.1	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-synt_F	PF01990.17	gi|84490169|ref|YP_448401.1|	-	0.0013	19.0	0.8	1.3	9.4	0.1	2.7	2	1	0	2	2	2	2	ATP	synthase	(F/14-kDa)	subunit
ATP-grasp	PF02222.22	gi|84490169|ref|YP_448401.1|	-	0.012	15.2	0.6	0.024	14.2	0.1	1.8	2	0	0	2	2	2	0	ATP-grasp	domain
PH_14	PF17787.1	gi|84490169|ref|YP_448401.1|	-	0.098	12.5	0.1	0.22	11.4	0.1	1.6	1	0	0	1	1	1	0	PH	domain
POR	PF01558.18	gi|84490170|ref|YP_448402.1|	-	5.2e-32	111.3	0.3	6e-32	111.1	0.3	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF1103	PF06513.11	gi|84490170|ref|YP_448402.1|	-	0.026	14.1	1.4	0.036	13.7	1.4	1.3	1	0	0	1	1	1	0	Repeat	of	unknown	function	(DUF1103)
TPP_enzyme_C	PF02775.21	gi|84490171|ref|YP_448403.1|	-	1.5e-38	132.0	0.4	2e-38	131.6	0.4	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|84490172|ref|YP_448404.1|	-	2.6e-76	256.4	0.8	3.3e-76	256.0	0.8	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|84490172|ref|YP_448404.1|	-	5.4e-22	78.0	0.0	9.9e-22	77.2	0.0	1.5	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
TPP_enzyme_N	PF02776.18	gi|84490172|ref|YP_448404.1|	-	1.1e-05	25.1	0.1	1.9e-05	24.3	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Transketolase_C	PF02780.20	gi|84490172|ref|YP_448404.1|	-	0.00019	21.3	0.0	0.00038	20.3	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
IF-2B	PF01008.17	gi|84490172|ref|YP_448404.1|	-	0.028	13.7	0.0	0.044	13.0	0.0	1.3	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
Arg_tRNA_synt_N	PF03485.16	gi|84490172|ref|YP_448404.1|	-	0.07	13.7	0.0	0.43	11.2	0.0	2.2	2	0	0	2	2	2	0	Arginyl	tRNA	synthetase	N	terminal	domain
Rootletin	PF15035.6	gi|84490172|ref|YP_448404.1|	-	0.14	12.2	0.0	0.21	11.6	0.0	1.2	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
Fer4	PF00037.27	gi|84490173|ref|YP_448405.1|	-	3.7e-14	51.9	14.3	1.4e-07	31.0	3.4	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84490173|ref|YP_448405.1|	-	2e-10	41.1	7.6	2.4e-10	40.8	7.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490173|ref|YP_448405.1|	-	6.1e-10	38.7	14.6	2.3e-06	27.4	2.7	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|84490173|ref|YP_448405.1|	-	1.7e-09	37.6	10.5	6.1e-05	23.1	1.9	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490173|ref|YP_448405.1|	-	4.3e-08	33.2	8.4	8.2e-08	32.3	8.4	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490173|ref|YP_448405.1|	-	1.2e-07	31.7	11.9	2e-05	24.6	12.5	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84490173|ref|YP_448405.1|	-	1.5e-07	31.1	9.8	2.8e-05	23.9	0.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84490173|ref|YP_448405.1|	-	1e-06	29.5	8.2	0.004	18.1	1.5	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.6	gi|84490173|ref|YP_448405.1|	-	1.1e-05	25.8	10.1	0.0046	17.5	2.6	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|84490173|ref|YP_448405.1|	-	9.7e-05	23.0	7.0	0.051	14.3	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|84490173|ref|YP_448405.1|	-	0.00011	22.4	11.8	0.0046	17.4	2.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84490173|ref|YP_448405.1|	-	0.00013	22.3	7.4	0.011	16.1	1.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84490173|ref|YP_448405.1|	-	0.0015	19.0	12.5	0.13	12.8	12.5	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84490173|ref|YP_448405.1|	-	0.012	16.5	15.7	0.31	12.1	3.6	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|84490173|ref|YP_448405.1|	-	0.016	16.0	6.6	0.98	10.3	0.8	2.1	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|84490173|ref|YP_448405.1|	-	0.07	13.3	7.1	0.16	12.1	7.1	1.6	1	1	0	1	1	1	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_18	PF13746.6	gi|84490173|ref|YP_448405.1|	-	0.2	11.9	12.7	0.64	10.2	2.2	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
PRKG1_interact	PF15898.5	gi|84490174|ref|YP_448406.1|	-	0.00018	22.4	2.7	0.00018	22.4	2.7	3.4	1	1	2	3	3	3	2	cGMP-dependent	protein	kinase	interacting	domain
HALZ	PF02183.18	gi|84490174|ref|YP_448406.1|	-	0.006	16.8	0.4	0.006	16.8	0.4	4.2	4	2	1	5	5	5	1	Homeobox	associated	leucine	zipper
DivIC	PF04977.15	gi|84490174|ref|YP_448406.1|	-	0.019	14.7	2.0	0.019	14.7	2.0	4.6	2	1	1	4	4	3	0	Septum	formation	initiator
ZapB	PF06005.12	gi|84490174|ref|YP_448406.1|	-	0.031	14.7	4.4	0.031	14.7	4.4	4.4	1	1	3	4	4	4	0	Cell	division	protein	ZapB
Rootletin	PF15035.6	gi|84490174|ref|YP_448406.1|	-	0.54	10.3	32.5	1.1e+02	2.7	32.5	3.1	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
ATG16	PF08614.11	gi|84490174|ref|YP_448406.1|	-	1.7	8.8	32.0	0.1	12.8	18.8	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
SpecificRecomb	PF10136.9	gi|84490174|ref|YP_448406.1|	-	3.4	5.9	12.9	4.5	5.4	2.0	2.1	1	1	1	2	2	2	0	Site-specific	recombinase
V_ATPase_I	PF01496.19	gi|84490174|ref|YP_448406.1|	-	3.7	5.4	31.3	0.88	7.4	20.1	2.0	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Herpes_UL6	PF01763.16	gi|84490174|ref|YP_448406.1|	-	4.3	5.7	30.1	1.1	7.7	12.3	2.7	1	1	2	3	3	3	0	Herpesvirus	UL6	like
KxDL	PF10241.9	gi|84490174|ref|YP_448406.1|	-	6.3	7.2	26.4	0.64	10.3	3.7	3.9	1	1	3	4	4	4	0	Uncharacterized	conserved	protein
APG6_N	PF17675.1	gi|84490174|ref|YP_448406.1|	-	9	6.8	37.2	6.2	7.4	15.3	2.8	1	1	2	3	3	3	0	Apg6	coiled-coil	region
DHNA	PF04038.12	gi|84490175|ref|YP_448407.1|	-	3.3e-40	136.9	0.0	3.8e-40	136.8	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
DUF515	PF04415.12	gi|84490176|ref|YP_448408.1|	-	1.4e-16	60.0	21.6	1.8e-08	33.2	8.9	3.1	2	1	1	3	3	3	3	Protein	of	unknown	function	(DUF515)
Orf78	PF06024.12	gi|84490176|ref|YP_448408.1|	-	0.0072	16.6	0.7	0.0072	16.6	0.7	2.5	2	1	1	3	3	3	1	Orf78	(ac78)
RcpC	PF16976.5	gi|84490176|ref|YP_448408.1|	-	0.034	14.2	0.2	0.084	12.9	0.2	1.7	1	0	0	1	1	1	0	Flp	pilus	assembly	protein	RcpC/CpaB
Chordopox_G3	PF06129.12	gi|84490176|ref|YP_448408.1|	-	2.7	8.7	7.5	22	5.8	7.5	2.5	1	1	0	1	1	1	0	Chordopoxvirus	G3	protein
Fasciclin	PF02469.22	gi|84490176|ref|YP_448408.1|	-	5.2	7.3	9.9	1.4	9.2	5.9	2.2	2	1	0	2	2	2	0	Fasciclin	domain
CDP-OH_P_transf	PF01066.21	gi|84490177|ref|YP_448409.1|	-	1.4e-09	38.5	1.5	1.4e-09	38.5	1.5	3.3	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DUF3488	PF11992.8	gi|84490177|ref|YP_448409.1|	-	0.0084	15.1	6.8	0.015	14.3	6.8	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3488)
RNase_HII	PF01351.18	gi|84490178|ref|YP_448410.1|	-	7.5e-50	169.5	2.0	8.6e-50	169.3	2.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
Actin	PF00022.19	gi|84490178|ref|YP_448410.1|	-	0.05	12.2	0.6	0.13	10.8	0.0	1.7	1	1	1	2	2	2	0	Actin
DUF269	PF03270.13	gi|84490178|ref|YP_448410.1|	-	0.079	13.1	0.1	0.16	12.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF269
MotA_ExbB	PF01618.16	gi|84490179|ref|YP_448411.1|	-	7.9e-29	100.0	3.0	1.8e-28	98.8	1.3	2.3	2	0	0	2	2	2	1	MotA/TolQ/ExbB	proton	channel	family
ExbD	PF02472.16	gi|84490180|ref|YP_448412.1|	-	1.9e-05	24.8	1.3	2.7e-05	24.3	1.2	1.5	1	1	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
IMP_cyclohyd	PF07826.11	gi|84490181|ref|YP_448413.1|	-	1.5e-66	223.6	1.2	1.8e-66	223.4	1.2	1.0	1	0	0	1	1	1	1	IMP	cyclohydrolase-like	protein
Coatamer_beta_C	PF07718.12	gi|84490181|ref|YP_448413.1|	-	0.11	12.5	0.3	0.59	10.0	0.2	1.9	1	1	1	2	2	2	0	Coatomer	beta	C-terminal	region
Beta_helix	PF13229.6	gi|84490182|ref|YP_448414.1|	-	0.0027	17.6	45.4	0.0027	17.6	45.4	10.4	2	2	6	8	8	8	1	Right	handed	beta	helix	region
Hexapep	PF00132.24	gi|84490182|ref|YP_448414.1|	-	3	7.7	17.8	0.23	11.2	0.8	6.3	6	0	0	6	6	6	0	Bacterial	transferase	hexapeptide	(six	repeats)
DUF824	PF05688.11	gi|84490182|ref|YP_448414.1|	-	3.5	7.5	10.3	0.73	9.7	0.0	3.8	3	0	0	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
Big_3_5	PF16640.5	gi|84490183|ref|YP_448415.1|	-	4.4e-12	46.0	33.4	4.6e-07	29.9	12.4	7.3	8	1	0	8	8	8	3	Bacterial	Ig-like	domain	(group	3)
YtkA	PF13115.6	gi|84490183|ref|YP_448415.1|	-	0.63	10.7	4.8	0.84	10.3	0.4	3.4	3	0	0	3	3	3	0	YtkA-like
DUF1416	PF07210.12	gi|84490183|ref|YP_448415.1|	-	1.2	9.1	4.1	0.96	9.4	0.2	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1416)
F420_ligase	PF01996.16	gi|84490184|ref|YP_448416.1|	-	1.2e-62	211.5	0.7	1.5e-62	211.1	0.7	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
UPF0052	PF01933.18	gi|84490185|ref|YP_448417.1|	-	5.3e-39	134.2	0.9	6.3e-39	134.0	0.9	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
GCH_III	PF05165.12	gi|84490186|ref|YP_448418.1|	-	1.8e-93	312.4	0.8	2.2e-93	312.1	0.8	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	III
mCpol	PF18182.1	gi|84490186|ref|YP_448418.1|	-	2.5e-05	24.6	0.2	0.0099	16.2	0.1	2.2	2	0	0	2	2	2	2	minimal	CRISPR	polymerase	domain
Helicase_PWI	PF18149.1	gi|84490186|ref|YP_448418.1|	-	0.00027	21.1	0.1	0.0038	17.4	0.0	2.2	1	1	1	2	2	2	1	N-terminal	helicase	PWI	domain
Dus	PF01207.17	gi|84490187|ref|YP_448419.1|	-	1e-10	41.3	0.6	1.5e-10	40.7	0.6	1.3	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.21	gi|84490187|ref|YP_448419.1|	-	0.00043	19.6	1.2	0.23	10.6	0.2	2.8	2	1	1	3	3	3	2	Dihydroorotate	dehydrogenase
G3P_antiterm	PF04309.12	gi|84490187|ref|YP_448419.1|	-	0.0007	19.0	0.4	0.002	17.5	0.0	1.9	3	0	0	3	3	3	1	Glycerol-3-phosphate	responsive	antiterminator
IMPDH	PF00478.25	gi|84490187|ref|YP_448419.1|	-	0.003	16.6	0.2	0.0034	16.4	0.2	1.2	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.21	gi|84490187|ref|YP_448419.1|	-	0.011	15.3	0.3	0.021	14.3	0.2	1.5	1	1	0	1	1	1	0	Histidine	biosynthesis	protein
UPF0175	PF03683.13	gi|84490187|ref|YP_448419.1|	-	0.066	12.9	0.0	2.6	7.8	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0175)
RasGAP_C	PF03836.15	gi|84490188|ref|YP_448420.1|	-	0.0097	16.1	0.9	0.014	15.5	0.9	1.1	1	0	0	1	1	1	1	RasGAP	C-terminus
HOIP-UBA	PF16678.5	gi|84490188|ref|YP_448420.1|	-	0.094	12.7	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	HOIP	UBA	domain	pair
NAD_binding_7	PF13241.6	gi|84490189|ref|YP_448421.1|	-	2.7e-22	79.2	0.1	5.4e-22	78.2	0.1	1.5	1	0	0	1	1	1	1	Putative	NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|84490189|ref|YP_448421.1|	-	5.2e-06	25.9	0.2	1.4e-05	24.5	0.0	1.7	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|84490189|ref|YP_448421.1|	-	0.00014	22.0	1.1	0.0012	18.9	0.1	2.2	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.18	gi|84490189|ref|YP_448421.1|	-	0.00045	20.5	0.9	0.00045	20.5	0.9	2.3	2	2	1	3	3	3	1	TrkA-N	domain
ThiF	PF00899.21	gi|84490189|ref|YP_448421.1|	-	0.0057	16.0	1.6	0.059	12.7	0.2	2.2	1	1	0	2	2	2	1	ThiF	family
NmrA	PF05368.13	gi|84490189|ref|YP_448421.1|	-	0.0086	15.6	0.0	0.018	14.6	0.0	1.5	1	1	0	1	1	1	1	NmrA-like	family
GFO_IDH_MocA	PF01408.22	gi|84490189|ref|YP_448421.1|	-	0.021	15.6	0.0	0.049	14.4	0.0	1.7	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
PH_18	PF18469.1	gi|84490189|ref|YP_448421.1|	-	0.026	14.5	3.3	0.032	14.2	2.5	1.6	1	1	0	1	1	1	0	Pleckstrin	homology	domain
AlaDh_PNT_C	PF01262.21	gi|84490189|ref|YP_448421.1|	-	0.037	13.3	0.2	0.085	12.1	0.0	1.7	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
AdoHcyase_NAD	PF00670.21	gi|84490189|ref|YP_448421.1|	-	0.061	13.4	0.3	0.16	12.1	0.2	1.6	1	1	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
UDPG_MGDP_dh_C	PF03720.15	gi|84490189|ref|YP_448421.1|	-	0.07	13.6	0.0	0.15	12.5	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Sirohm_synth_M	PF14824.6	gi|84490189|ref|YP_448421.1|	-	0.081	12.4	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Sirohaem	biosynthesis	protein	central
IlvN	PF07991.12	gi|84490189|ref|YP_448421.1|	-	0.13	11.9	0.2	0.32	10.5	0.1	1.6	1	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
NAD_binding_10	PF13460.6	gi|84490189|ref|YP_448421.1|	-	0.18	11.7	0.0	0.33	10.8	0.0	1.4	1	1	0	1	1	1	0	NAD(P)H-binding
Shikimate_DH	PF01488.20	gi|84490190|ref|YP_448422.1|	-	1.4e-38	132.0	0.4	4.6e-38	130.4	0.4	1.9	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_N	PF05201.15	gi|84490190|ref|YP_448422.1|	-	1.1e-30	106.3	0.1	2.6e-30	105.1	0.1	1.6	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.20	gi|84490190|ref|YP_448422.1|	-	3.5e-18	65.9	4.7	3.5e-18	65.9	4.7	2.0	2	0	0	2	2	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.17	gi|84490190|ref|YP_448422.1|	-	1.3e-06	28.9	0.4	4.6e-06	27.1	0.2	2.1	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|84490190|ref|YP_448422.1|	-	9.1e-06	26.0	1.7	6.1e-05	23.3	0.1	2.7	2	1	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_7	PF13241.6	gi|84490190|ref|YP_448422.1|	-	3.5e-05	24.2	0.0	9.4e-05	22.8	0.0	1.8	1	0	0	1	1	1	1	Putative	NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|84490190|ref|YP_448422.1|	-	3.7e-05	23.2	0.1	7.6e-05	22.1	0.1	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
THF_DHG_CYH_C	PF02882.19	gi|84490190|ref|YP_448422.1|	-	0.0001	21.7	0.5	0.0023	17.3	0.1	2.3	2	0	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Glu_dehyd_C	PF16912.5	gi|84490190|ref|YP_448422.1|	-	0.00011	21.8	0.5	0.00035	20.1	0.1	2.0	2	0	0	2	2	2	1	Glucose	dehydrogenase	C-terminus
NAD_binding_2	PF03446.15	gi|84490190|ref|YP_448422.1|	-	0.00033	20.9	0.3	0.00076	19.7	0.0	1.8	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.18	gi|84490190|ref|YP_448422.1|	-	0.0012	19.1	0.2	0.004	17.4	0.2	2.0	1	0	0	1	1	1	1	TrkA-N	domain
AdoHcyase_NAD	PF00670.21	gi|84490190|ref|YP_448422.1|	-	0.0022	18.1	0.2	0.0057	16.7	0.1	1.7	2	0	0	2	2	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Gp_dh_N	PF00044.24	gi|84490190|ref|YP_448422.1|	-	0.011	16.0	0.3	0.7	10.3	0.1	2.8	1	1	1	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
PglD_N	PF17836.1	gi|84490190|ref|YP_448422.1|	-	0.018	15.7	0.4	0.16	12.6	0.1	2.7	2	0	0	2	2	2	0	PglD	N-terminal	domain
GFO_IDH_MocA	PF01408.22	gi|84490190|ref|YP_448422.1|	-	0.019	15.8	0.1	0.06	14.2	0.0	1.8	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DapB_N	PF01113.20	gi|84490190|ref|YP_448422.1|	-	0.026	14.6	0.1	0.071	13.2	0.1	1.8	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
ApbA	PF02558.16	gi|84490190|ref|YP_448422.1|	-	0.058	13.0	0.0	0.15	11.7	0.0	1.7	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
IlvN	PF07991.12	gi|84490190|ref|YP_448422.1|	-	0.066	12.8	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
MCR_alpha	PF02249.17	gi|84490190|ref|YP_448422.1|	-	0.21	12.0	0.8	0.87	10.0	0.2	2.2	2	1	0	2	2	2	0	Methyl-coenzyme	M	reductase	alpha	subunit,	C-terminal	domain
Tautomerase	PF01361.21	gi|84490191|ref|YP_448423.1|	-	7.1e-15	54.7	0.0	7.6e-15	54.6	0.0	1.0	1	0	0	1	1	1	1	Tautomerase	enzyme
Tautomerase_2	PF14552.6	gi|84490191|ref|YP_448423.1|	-	0.0002	21.4	0.0	0.0002	21.4	0.0	1.1	1	0	0	1	1	1	1	Tautomerase	enzyme
Tautomerase_3	PF14832.6	gi|84490191|ref|YP_448423.1|	-	0.0091	16.2	0.0	0.0093	16.2	0.0	1.0	1	0	0	1	1	1	1	Putative	oxalocrotonate	tautomerase	enzyme
VitD-bind_III	PF09164.10	gi|84490191|ref|YP_448423.1|	-	0.024	14.6	0.0	0.031	14.3	0.0	1.1	1	0	0	1	1	1	0	Vitamin	D	binding	protein,	domain	III
Usp	PF00582.26	gi|84490192|ref|YP_448424.1|	-	4e-33	114.9	0.2	4.6e-33	114.7	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Asparaginase	PF00710.20	gi|84490193|ref|YP_448425.1|	-	8.8e-64	214.6	1.2	8.8e-64	214.6	1.2	1.6	2	0	0	2	2	2	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|84490193|ref|YP_448425.1|	-	2.3e-33	114.8	0.0	1.6e-32	112.1	0.0	2.2	2	0	0	2	2	2	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|84490193|ref|YP_448425.1|	-	1.7e-19	68.9	2.0	1.7e-19	68.9	2.0	1.8	2	0	0	2	2	2	1	GatD	N-terminal	domain
GatB_N	PF02934.15	gi|84490194|ref|YP_448426.1|	-	1.5e-65	221.3	0.0	4.2e-65	219.8	0.0	1.7	1	1	1	2	2	2	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|84490194|ref|YP_448426.1|	-	7.8e-20	71.3	3.5	2.3e-19	69.8	3.5	1.8	1	0	0	1	1	1	1	GatB	domain
GAD	PF02938.14	gi|84490194|ref|YP_448426.1|	-	6e-15	55.3	0.0	2.3e-14	53.4	0.0	2.1	1	0	0	1	1	1	1	GAD	domain
YqeY	PF09424.10	gi|84490194|ref|YP_448426.1|	-	6.1e-08	32.8	7.6	2.8e-07	30.7	1.5	2.9	2	0	0	2	2	2	2	Yqey-like	protein
Pyr_redox_2	PF07992.14	gi|84490195|ref|YP_448427.1|	-	5.5e-52	176.8	2.8	6.3e-52	176.6	2.8	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|84490195|ref|YP_448427.1|	-	1.3e-30	106.8	2.8	8e-24	84.4	0.1	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|84490195|ref|YP_448427.1|	-	7.4e-16	58.5	2.2	3.5e-14	53.1	0.0	2.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|84490195|ref|YP_448427.1|	-	1.4e-09	37.6	4.1	1.3e-05	24.5	0.5	3.1	2	1	1	3	3	3	3	FAD	binding	domain
HI0933_like	PF03486.14	gi|84490195|ref|YP_448427.1|	-	1.3e-08	33.9	1.8	0.00011	21.0	0.2	3.5	4	0	0	4	4	4	2	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|84490195|ref|YP_448427.1|	-	2.8e-08	33.5	0.5	1.3e-05	24.8	0.0	2.6	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|84490195|ref|YP_448427.1|	-	3.5e-08	33.1	3.3	0.0095	15.2	0.3	3.1	2	1	1	3	3	3	2	FAD	binding	domain
GIDA	PF01134.22	gi|84490195|ref|YP_448427.1|	-	2e-07	30.4	3.3	0.0048	16.0	0.5	3.7	3	1	0	4	4	4	3	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|84490195|ref|YP_448427.1|	-	6.1e-07	28.9	3.0	0.00019	20.7	0.4	2.8	2	1	0	2	2	2	2	Thi4	family
NAD_binding_8	PF13450.6	gi|84490195|ref|YP_448427.1|	-	5.4e-05	23.3	0.3	0.033	14.4	0.2	2.4	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
K_oxygenase	PF13434.6	gi|84490195|ref|YP_448427.1|	-	0.0011	18.2	0.8	5.4	6.0	0.0	3.3	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
DAO	PF01266.24	gi|84490195|ref|YP_448427.1|	-	0.005	16.5	9.3	0.076	12.6	1.5	3.7	4	1	0	4	4	4	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.6	gi|84490195|ref|YP_448427.1|	-	0.013	15.9	0.1	0.061	13.8	0.0	2.1	2	1	0	2	2	2	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|84490195|ref|YP_448427.1|	-	0.031	13.6	0.6	1.4	8.1	0.3	2.4	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|84490195|ref|YP_448427.1|	-	0.074	12.1	0.5	0.44	9.5	0.3	2.2	3	0	0	3	3	3	0	Lycopene	cyclase	protein
AAA	PF00004.29	gi|84490197|ref|YP_448429.1|	-	4.3e-37	127.5	0.5	1e-36	126.3	0.0	1.9	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|84490197|ref|YP_448429.1|	-	2.5e-09	37.1	0.0	4.3e-09	36.3	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_2	PF07724.14	gi|84490197|ref|YP_448429.1|	-	9.9e-09	35.5	0.0	2.6e-08	34.2	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.13	gi|84490197|ref|YP_448429.1|	-	3.4e-08	33.1	0.0	1.2e-07	31.3	0.0	1.7	1	1	1	2	2	2	1	TIP49	P-loop	domain
RNA_helicase	PF00910.22	gi|84490197|ref|YP_448429.1|	-	2.9e-06	27.6	0.7	3.2e-05	24.2	0.0	2.8	2	2	0	2	2	2	1	RNA	helicase
Bac_DnaA	PF00308.18	gi|84490197|ref|YP_448429.1|	-	4.9e-06	26.5	0.2	8.8e-06	25.7	0.2	1.4	1	0	0	1	1	1	1	Bacterial	dnaA	protein
AAA_5	PF07728.14	gi|84490197|ref|YP_448429.1|	-	7.4e-06	26.0	0.1	4.3e-05	23.5	0.0	2.5	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|84490197|ref|YP_448429.1|	-	1.4e-05	25.3	0.1	0.0042	17.4	0.0	3.0	1	1	1	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|84490197|ref|YP_448429.1|	-	5.2e-05	23.7	0.0	0.0058	17.0	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|84490197|ref|YP_448429.1|	-	9.5e-05	22.2	0.0	0.00019	21.2	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.21	gi|84490197|ref|YP_448429.1|	-	0.00034	20.0	0.1	0.00088	18.7	0.1	1.8	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
ATPase	PF06745.13	gi|84490197|ref|YP_448429.1|	-	0.00037	19.9	0.2	0.75	9.1	0.0	2.3	1	1	1	2	2	2	2	KaiC
AAA_14	PF13173.6	gi|84490197|ref|YP_448429.1|	-	0.00076	19.5	0.2	0.0027	17.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
DUF815	PF05673.13	gi|84490197|ref|YP_448429.1|	-	0.0013	17.9	0.0	0.0023	17.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_18	PF13238.6	gi|84490197|ref|YP_448429.1|	-	0.0016	19.0	0.0	0.0075	16.8	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|84490197|ref|YP_448429.1|	-	0.0027	17.9	0.0	0.0074	16.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|84490197|ref|YP_448429.1|	-	0.003	16.9	0.8	0.0049	16.2	0.0	1.8	2	1	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
Parvo_NS1	PF01057.17	gi|84490197|ref|YP_448429.1|	-	0.0032	16.6	0.0	0.006	15.7	0.0	1.4	1	0	0	1	1	1	1	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.11	gi|84490197|ref|YP_448429.1|	-	0.0032	17.3	0.0	0.0069	16.2	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|84490197|ref|YP_448429.1|	-	0.0035	17.1	0.2	0.01	15.6	0.2	1.9	1	1	0	1	1	1	1	AAA+	lid	domain
AAA_7	PF12775.7	gi|84490197|ref|YP_448429.1|	-	0.0042	16.6	0.1	0.03	13.8	0.0	2.4	1	1	0	1	1	1	1	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|84490197|ref|YP_448429.1|	-	0.0053	17.0	0.0	0.016	15.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|84490197|ref|YP_448429.1|	-	0.0083	16.1	0.0	0.019	14.9	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
TsaE	PF02367.17	gi|84490197|ref|YP_448429.1|	-	0.016	15.2	0.0	0.035	14.1	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_24	PF13479.6	gi|84490197|ref|YP_448429.1|	-	0.021	14.6	0.0	0.045	13.5	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Torsin	PF06309.11	gi|84490197|ref|YP_448429.1|	-	0.027	14.6	0.0	0.066	13.3	0.0	1.7	1	0	0	1	1	1	0	Torsin
AAA_25	PF13481.6	gi|84490197|ref|YP_448429.1|	-	0.028	14.0	0.0	0.17	11.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|84490197|ref|YP_448429.1|	-	0.028	14.5	0.1	0.9	9.6	0.0	2.8	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
Sigma54_activat	PF00158.26	gi|84490197|ref|YP_448429.1|	-	0.032	13.9	0.0	0.32	10.7	0.0	2.2	1	1	1	2	2	2	0	Sigma-54	interaction	domain
RsgA_GTPase	PF03193.16	gi|84490197|ref|YP_448429.1|	-	0.035	14.0	0.0	0.12	12.3	0.0	2.0	1	1	0	1	1	1	0	RsgA	GTPase
NTPase_1	PF03266.15	gi|84490197|ref|YP_448429.1|	-	0.036	14.0	0.2	7.8	6.4	0.0	2.8	3	0	0	3	3	2	0	NTPase
TniB	PF05621.11	gi|84490197|ref|YP_448429.1|	-	0.051	13.0	0.1	0.42	10.0	0.0	2.2	1	1	0	2	2	2	0	Bacterial	TniB	protein
AAA_30	PF13604.6	gi|84490197|ref|YP_448429.1|	-	0.069	12.9	0.0	0.18	11.5	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.9	gi|84490197|ref|YP_448429.1|	-	0.093	12.5	0.0	0.23	11.2	0.0	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
ELFV_dehydrog	PF00208.21	gi|84490198|ref|YP_448430.1|	-	1.2e-86	290.4	3.3	1.2e-86	290.4	3.3	1.4	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|84490198|ref|YP_448430.1|	-	1.7e-51	173.5	0.0	3.5e-51	172.5	0.0	1.5	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
TelA	PF05816.11	gi|84490198|ref|YP_448430.1|	-	0.079	12.0	0.5	0.43	9.6	0.2	2.1	2	0	0	2	2	2	0	Toxic	anion	resistance	protein	(TelA)
MatE	PF01554.18	gi|84490199|ref|YP_448431.1|	-	1.1e-50	171.5	50.5	5.6e-28	97.6	18.9	2.9	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|84490199|ref|YP_448431.1|	-	3.8e-10	40.0	14.5	3.8e-10	40.0	14.5	5.1	2	1	3	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
Hjc	PF01870.18	gi|84490200|ref|YP_448432.1|	-	1.9e-31	107.9	0.0	2.4e-31	107.6	0.0	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
Putative_PNPOx	PF01243.20	gi|84490201|ref|YP_448433.1|	-	0.0002	21.5	0.0	0.00024	21.2	0.0	1.0	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Lipoprotein_15	PF03640.15	gi|84490201|ref|YP_448433.1|	-	0.016	14.7	0.3	0.027	14.0	0.3	1.4	1	0	0	1	1	1	0	Secreted	repeat	of	unknown	function
DHODB_Fe-S_bind	PF10418.9	gi|84490202|ref|YP_448434.1|	-	1.8e-12	46.9	4.3	3.4e-12	45.9	4.3	1.5	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.24	gi|84490202|ref|YP_448434.1|	-	0.013	15.8	0.0	0.023	15.0	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	FAD-binding	domain
LAMTOR5	PF16672.5	gi|84490202|ref|YP_448434.1|	-	0.16	11.9	0.4	0.35	10.8	0.4	1.5	1	0	0	1	1	1	0	Ragulator	complex	protein	LAMTOR5
DHO_dh	PF01180.21	gi|84490203|ref|YP_448435.1|	-	1.2e-70	238.0	1.1	1.4e-70	237.9	1.1	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|84490203|ref|YP_448435.1|	-	1.5e-13	50.5	0.0	1.8e-11	43.7	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|84490203|ref|YP_448435.1|	-	1.2e-05	24.9	0.1	0.00017	21.1	0.0	2.6	3	1	0	3	3	3	1	Histidine	biosynthesis	protein
IMPDH	PF00478.25	gi|84490203|ref|YP_448435.1|	-	0.00098	18.2	0.6	0.0032	16.5	0.6	1.8	1	1	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.15	gi|84490203|ref|YP_448435.1|	-	0.0037	16.7	0.2	0.019	14.3	0.2	2.2	1	1	0	1	1	1	1	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|84490203|ref|YP_448435.1|	-	0.034	13.2	0.3	0.17	10.9	0.0	2.0	2	1	0	2	2	2	0	FMN-dependent	dehydrogenase
DUF561	PF04481.12	gi|84490203|ref|YP_448435.1|	-	0.42	9.8	2.4	3.7	6.7	0.0	2.8	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
Nop	PF01798.18	gi|84490204|ref|YP_448436.1|	-	2.4e-57	194.0	1.1	2.4e-57	194.0	1.1	1.9	2	0	0	2	2	2	1	snoRNA	binding	domain,	fibrillarin
AP3D1	PF06375.11	gi|84490204|ref|YP_448436.1|	-	2.2	8.5	18.2	0.27	11.5	13.3	2.0	2	0	0	2	2	2	0	AP-3	complex	subunit	delta-1
Fibrillarin	PF01269.17	gi|84490205|ref|YP_448437.1|	-	2.4e-93	311.4	0.1	2.6e-93	311.3	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_25	PF13649.6	gi|84490205|ref|YP_448437.1|	-	0.029	15.0	0.0	0.05	14.3	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|84490205|ref|YP_448437.1|	-	0.063	13.9	0.0	0.18	12.4	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
DFP	PF04127.15	gi|84490206|ref|YP_448438.1|	-	1.4e-54	184.8	0.4	1.4e-54	184.8	0.4	1.5	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|84490206|ref|YP_448438.1|	-	9.3e-30	103.5	1.4	9.3e-30	103.5	1.4	1.8	2	0	0	2	2	2	1	Flavoprotein
Gly_kinase	PF02595.15	gi|84490206|ref|YP_448438.1|	-	0.0037	16.3	0.1	0.0062	15.6	0.1	1.3	1	0	0	1	1	1	1	Glycerate	kinase	family
DcpS	PF05652.12	gi|84490206|ref|YP_448438.1|	-	0.085	13.7	0.9	26	5.7	0.0	3.4	2	1	1	3	3	3	0	Scavenger	mRNA	decapping	enzyme	(DcpS)	N-terminal
DJ-1_PfpI	PF01965.24	gi|84490206|ref|YP_448438.1|	-	0.15	11.9	1.6	24	4.7	0.1	3.3	3	1	0	3	3	3	0	DJ-1/PfpI	family
PsbP	PF01789.16	gi|84490207|ref|YP_448439.1|	-	8.4e-12	45.5	0.6	1.1e-11	45.1	0.6	1.1	1	0	0	1	1	1	1	PsbP
DcrB	PF08786.11	gi|84490207|ref|YP_448439.1|	-	0.00015	21.9	0.0	0.0002	21.5	0.0	1.1	1	0	0	1	1	1	1	DcrB
DUF5038	PF16441.5	gi|84490207|ref|YP_448439.1|	-	0.053	13.5	0.0	0.088	12.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5038)
DUF4969	PF16339.5	gi|84490208|ref|YP_448440.1|	-	0.024	15.0	2.3	0.72	10.2	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4969)
Hira	PF07569.11	gi|84490208|ref|YP_448440.1|	-	8.4	6.0	10.3	22	4.7	6.3	2.1	2	0	0	2	2	2	0	TUP1-like	enhancer	of	split
PDT	PF00800.18	gi|84490209|ref|YP_448441.1|	-	3.2e-59	199.8	0.3	4.1e-59	199.5	0.3	1.1	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.25	gi|84490209|ref|YP_448441.1|	-	9.4e-07	28.5	0.0	1.9e-06	27.6	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
SLAM	PF06214.11	gi|84490209|ref|YP_448441.1|	-	0.051	13.6	0.1	0.46	10.5	0.0	2.3	1	1	1	2	2	2	0	Signaling	lymphocytic	activation	molecule	(SLAM)	protein
CBS	PF00571.28	gi|84490210|ref|YP_448442.1|	-	1.4e-47	159.9	20.6	3.5e-14	53.0	0.3	4.1	4	0	0	4	4	4	4	CBS	domain
CBS	PF00571.28	gi|84490211|ref|YP_448443.1|	-	9.7e-50	166.9	13.8	4.1e-13	49.5	0.7	4.2	4	0	0	4	4	4	4	CBS	domain
PRC	PF05239.16	gi|84490211|ref|YP_448443.1|	-	0.0052	16.8	12.5	0.048	13.8	0.3	4.5	3	1	1	4	4	4	2	PRC-barrel	domain
DUF3659	PF12396.8	gi|84490211|ref|YP_448443.1|	-	0.77	9.7	5.4	3	7.8	0.3	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3659)
CBS	PF00571.28	gi|84490212|ref|YP_448444.1|	-	7.1e-15	55.2	7.6	1.2e-07	32.0	1.5	2.5	2	1	0	2	2	2	2	CBS	domain
TF_Zn_Ribbon	PF08271.12	gi|84490212|ref|YP_448444.1|	-	0.23	11.0	3.4	0.7	9.5	3.4	1.9	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF4428	PF14471.6	gi|84490212|ref|YP_448444.1|	-	0.24	11.4	5.4	0.11	12.5	1.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
Fer4_14	PF13394.6	gi|84490213|ref|YP_448445.1|	-	1.1e-05	25.5	1.4	9.2e-05	22.6	0.0	2.2	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|84490213|ref|YP_448445.1|	-	0.0035	17.6	0.2	0.009	16.3	0.0	1.8	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|84490213|ref|YP_448445.1|	-	0.015	15.6	0.1	0.029	14.8	0.1	1.7	1	1	0	1	1	1	0	Radical	SAM	superfamily
GlcNAc-1_reg	PF18440.1	gi|84490213|ref|YP_448445.1|	-	0.024	14.9	0.2	0.047	13.9	0.2	1.7	1	0	0	1	1	1	0	Putative	GlcNAc-1	phosphotransferase	regulatory	domain
RtcR	PF06956.11	gi|84490213|ref|YP_448445.1|	-	0.12	11.8	1.3	0.25	10.7	0.4	1.9	1	1	1	2	2	2	0	Regulator	of	RNA	terminal	phosphate	cyclase
PTPS	PF01242.19	gi|84490214|ref|YP_448446.1|	-	2.4e-28	98.6	0.1	3.8e-28	97.9	0.1	1.3	1	1	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
DUF366	PF04017.12	gi|84490215|ref|YP_448447.1|	-	1e-66	223.9	2.6	1.2e-66	223.7	2.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF366)
AMNp_N	PF10423.9	gi|84490215|ref|YP_448447.1|	-	0.12	12.0	0.2	0.19	11.4	0.2	1.2	1	0	0	1	1	1	0	Bacterial	AMP	nucleoside	phosphorylase	N-terminus
DUF5612	PF18462.1	gi|84490217|ref|YP_448449.1|	-	9.5e-53	177.9	2.8	1.5e-52	177.2	2.8	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5612)
ACT_4	PF13291.6	gi|84490217|ref|YP_448449.1|	-	0.0032	18.0	0.3	0.011	16.4	0.0	1.9	2	0	0	2	2	2	1	ACT	domain
DUF5612	PF18462.1	gi|84490218|ref|YP_448450.1|	-	3.4e-70	234.4	4.9	5e-70	233.9	4.9	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5612)
ACT	PF01842.25	gi|84490218|ref|YP_448450.1|	-	1.5e-06	27.9	0.1	1e-05	25.2	0.0	2.4	2	1	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|84490218|ref|YP_448450.1|	-	3.7e-05	24.2	0.6	9.1e-05	23.0	0.1	1.9	2	0	0	2	2	2	1	ACT	domain
ACT_7	PF13840.6	gi|84490218|ref|YP_448450.1|	-	0.00076	19.2	0.0	0.0022	17.8	0.0	1.8	1	0	0	1	1	1	1	ACT	domain
DUF2129	PF09902.9	gi|84490218|ref|YP_448450.1|	-	0.15	12.2	0.8	5.9	7.0	0.1	2.4	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2129)
zinc_ribbon_4	PF13717.6	gi|84490219|ref|YP_448451.1|	-	7.6e-05	22.5	2.9	0.12	12.3	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
UPF0547	PF10571.9	gi|84490219|ref|YP_448451.1|	-	0.02	15.0	0.6	0.46	10.6	0.1	2.6	3	0	0	3	3	2	0	Uncharacterised	protein	family	UPF0547
DUF951	PF06107.11	gi|84490219|ref|YP_448451.1|	-	0.039	13.9	2.4	0.36	10.8	0.1	2.3	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
DNA_RNApol_7kD	PF03604.13	gi|84490219|ref|YP_448451.1|	-	0.041	13.6	7.6	0.34	10.6	0.1	2.9	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
CpXC	PF14353.6	gi|84490219|ref|YP_448451.1|	-	0.09	12.8	2.8	1.4	9.0	0.0	2.1	2	0	0	2	2	2	0	CpXC	protein
TbpB_A	PF17484.2	gi|84490219|ref|YP_448451.1|	-	0.12	13.1	0.0	0.12	13.1	0.0	1.1	1	0	0	1	1	1	0	N-Lobe	handle	Tf-binding	protein	B
DUF3268	PF11672.8	gi|84490219|ref|YP_448451.1|	-	0.14	12.5	1.5	0.15	12.4	1.5	1.1	1	0	0	1	1	1	0	zinc-finger-containing	domain
zf_UBZ	PF18439.1	gi|84490219|ref|YP_448451.1|	-	0.15	11.7	0.9	13	5.5	0.2	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
Zn-ribbon_8	PF09723.10	gi|84490219|ref|YP_448451.1|	-	0.17	12.0	10.0	1	9.6	10.0	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF1660	PF07874.11	gi|84490219|ref|YP_448451.1|	-	0.36	11.3	5.1	0.32	11.5	3.9	1.7	1	1	0	1	1	1	0	Prophage	protein	(DUF1660)
zf-C2HC_2	PF13913.6	gi|84490219|ref|YP_448451.1|	-	1.3	9.0	0.1	1.3	9.0	0.1	2.9	3	0	0	3	3	2	0	zinc-finger	of	a	C2HC-type
DUF530	PF04409.12	gi|84490219|ref|YP_448451.1|	-	1.5	7.1	3.1	1.8	6.8	3.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF530)
HypA	PF01155.19	gi|84490219|ref|YP_448451.1|	-	2.2	8.3	6.9	10	6.2	7.0	1.8	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-RING_4	PF14570.6	gi|84490219|ref|YP_448451.1|	-	2.4	8.0	10.2	76	3.2	10.2	2.1	1	1	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|84490219|ref|YP_448451.1|	-	2.5	8.1	8.6	13	5.8	0.1	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Ribosomal_S26e	PF01283.19	gi|84490220|ref|YP_448452.1|	-	0.15	12.5	0.4	0.15	12.5	0.4	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S26e
FeoB_N	PF02421.18	gi|84490221|ref|YP_448453.1|	-	6e-63	211.0	0.4	1.2e-62	210.1	0.4	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|84490221|ref|YP_448453.1|	-	1.9e-39	134.4	20.8	2.1e-28	98.8	5.5	2.5	2	0	0	2	2	2	2	Nucleoside	recognition
FeoB_C	PF07664.12	gi|84490221|ref|YP_448453.1|	-	3.9e-22	77.7	1.0	3.9e-22	77.7	1.0	2.3	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B	C	terminus
MMR_HSR1	PF01926.23	gi|84490221|ref|YP_448453.1|	-	7.5e-19	67.9	0.1	2.2e-18	66.4	0.1	1.9	1	1	1	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_Cyto	PF17910.1	gi|84490221|ref|YP_448453.1|	-	1.3e-13	51.3	0.0	2.8e-13	50.2	0.0	1.6	1	0	0	1	1	1	1	FeoB	cytosolic	helical	domain
SRPRB	PF09439.10	gi|84490221|ref|YP_448453.1|	-	0.00029	20.3	0.0	0.00047	19.6	0.0	1.3	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
RsgA_GTPase	PF03193.16	gi|84490221|ref|YP_448453.1|	-	0.0054	16.7	0.3	1.2	9.1	0.0	2.9	3	0	0	3	3	3	1	RsgA	GTPase
Arf	PF00025.21	gi|84490221|ref|YP_448453.1|	-	0.016	14.6	0.0	0.035	13.6	0.0	1.6	1	1	0	1	1	1	0	ADP-ribosylation	factor	family
AIG1	PF04548.16	gi|84490221|ref|YP_448453.1|	-	0.023	14.0	0.1	0.074	12.4	0.0	1.8	2	0	0	2	2	2	0	AIG1	family
Dynamin_N	PF00350.23	gi|84490221|ref|YP_448453.1|	-	0.027	14.5	0.2	1.7	8.7	0.1	2.5	2	0	0	2	2	2	0	Dynamin	family
GTP_EFTU	PF00009.27	gi|84490221|ref|YP_448453.1|	-	0.44	10.1	3.1	1.5	8.3	0.3	2.8	2	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
PNTB_4TM	PF12769.7	gi|84490221|ref|YP_448453.1|	-	0.93	10.0	6.6	0.19	12.2	1.6	2.4	2	0	0	2	2	2	0	4TM	region	of	pyridine	nucleotide	transhydrogenase,	mitoch
FeoA	PF04023.14	gi|84490222|ref|YP_448454.1|	-	2.9e-15	56.3	0.1	3.2e-15	56.2	0.1	1.0	1	0	0	1	1	1	1	FeoA	domain
Ehbp	PF10622.9	gi|84490223|ref|YP_448455.1|	-	3.8e-38	129.4	0.8	4.4e-38	129.2	0.8	1.0	1	0	0	1	1	1	1	Energy-converting	hydrogenase	B	subunit	P	(EhbP)
NADHdh	PF00146.21	gi|84490224|ref|YP_448456.1|	-	5.6e-23	81.7	24.3	2.9e-15	56.4	12.8	2.2	2	0	0	2	2	2	2	NADH	dehydrogenase
Complex1_49kDa	PF00346.19	gi|84490225|ref|YP_448457.1|	-	1.2e-43	149.2	0.6	1.7e-36	125.7	0.3	2.2	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|84490225|ref|YP_448457.1|	-	7e-18	64.8	1.1	2.4e-13	49.8	0.1	3.0	3	0	0	3	3	3	2	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.22	gi|84490226|ref|YP_448458.1|	-	2.5e-26	92.0	0.3	3e-26	91.8	0.3	1.1	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4	PF00037.27	gi|84490227|ref|YP_448459.1|	-	2.4e-10	39.8	15.6	2.8e-05	23.7	5.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84490227|ref|YP_448459.1|	-	5.6e-10	39.7	9.3	1e-09	38.8	9.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490227|ref|YP_448459.1|	-	2.2e-09	37.3	5.8	0.00028	20.9	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490227|ref|YP_448459.1|	-	3.5e-08	33.5	20.2	3.3e-06	27.2	10.1	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490227|ref|YP_448459.1|	-	2.2e-07	30.9	12.0	0.00017	21.6	2.6	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490227|ref|YP_448459.1|	-	3.6e-07	30.0	15.9	0.002	18.1	4.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84490227|ref|YP_448459.1|	-	8.4e-07	29.8	9.5	0.00075	20.4	0.9	2.5	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|84490227|ref|YP_448459.1|	-	1e-06	28.8	13.5	0.00034	20.9	2.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84490227|ref|YP_448459.1|	-	1.6e-06	28.5	4.7	0.015	15.7	0.6	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84490227|ref|YP_448459.1|	-	7e-05	22.7	14.9	0.014	15.5	4.1	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|84490227|ref|YP_448459.1|	-	0.00034	21.3	19.0	0.034	15.1	5.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|84490227|ref|YP_448459.1|	-	0.00037	21.3	7.2	0.017	16.0	0.5	2.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|84490227|ref|YP_448459.1|	-	0.0021	18.5	11.9	0.042	14.4	1.3	2.5	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|84490227|ref|YP_448459.1|	-	0.22	11.7	12.6	39	4.5	12.9	2.4	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84490227|ref|YP_448459.1|	-	0.3	11.7	15.2	0.33	11.5	2.3	2.8	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4	PF00037.27	gi|84490228|ref|YP_448460.1|	-	5.3e-66	216.0	148.0	2e-07	30.5	3.2	14.9	15	0	0	15	15	15	14	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84490228|ref|YP_448460.1|	-	1.2e-49	166.6	123.8	3.2e-08	34.0	12.0	9.1	7	1	2	9	9	9	9	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490228|ref|YP_448460.1|	-	3.5e-41	140.0	112.2	0.00074	20.4	1.3	14.1	12	2	2	14	14	14	12	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|84490228|ref|YP_448460.1|	-	2e-40	136.7	122.5	4.8e-07	29.9	10.9	8.9	4	2	7	11	11	11	11	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490228|ref|YP_448460.1|	-	2.4e-36	122.3	154.6	2.1e-05	24.4	3.2	15.1	14	1	0	14	14	14	13	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84490228|ref|YP_448460.1|	-	2.1e-33	114.2	133.4	2.2e-06	27.7	10.1	10.5	4	3	6	10	10	10	9	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490228|ref|YP_448460.1|	-	4e-30	103.7	122.3	1.8e-06	28.0	11.7	9.0	7	3	1	8	8	8	7	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|84490228|ref|YP_448460.1|	-	3.6e-29	99.0	139.2	0.0013	18.7	2.4	14.7	14	1	0	14	14	14	13	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84490228|ref|YP_448460.1|	-	2.5e-25	86.9	130.3	0.0033	17.8	2.1	14.2	14	0	0	14	14	14	13	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84490228|ref|YP_448460.1|	-	7.2e-20	71.3	130.7	5.6e-06	26.8	10.4	13.7	6	6	5	12	12	12	11	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|84490228|ref|YP_448460.1|	-	2.9e-14	53.2	131.1	0.001	19.5	10.3	12.9	7	4	5	12	12	12	9	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|84490228|ref|YP_448460.1|	-	8.1e-12	45.2	168.2	0.012	16.5	4.1	14.8	14	1	0	14	14	14	8	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|84490228|ref|YP_448460.1|	-	1.5e-09	38.0	116.9	0.0036	17.5	9.9	10.1	1	1	9	10	10	10	6	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84490228|ref|YP_448460.1|	-	0.0021	18.6	123.1	0.13	12.8	1.6	13.7	14	0	0	14	14	14	7	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|84490228|ref|YP_448460.1|	-	0.012	16.3	6.3	0.075	13.8	0.8	14.3	13	2	1	14	14	14	0	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|84490228|ref|YP_448460.1|	-	0.035	15.0	0.4	0.035	15.0	0.4	13.3	7	3	8	15	15	14	0	4Fe-4S	dicluster	domain
BioY	PF02632.14	gi|84490229|ref|YP_448461.1|	-	0.013	15.5	7.3	0.018	15.1	7.3	1.2	1	0	0	1	1	1	0	BioY	family
DUF2407_C	PF13373.6	gi|84490229|ref|YP_448461.1|	-	0.31	11.2	1.5	0.46	10.7	1.5	1.2	1	0	0	1	1	1	0	DUF2407	C-terminal	domain
Trep_Strep	PF09605.10	gi|84490229|ref|YP_448461.1|	-	0.39	10.7	10.4	0.055	13.4	2.5	2.0	1	1	1	2	2	2	0	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
DUF1269	PF06897.12	gi|84490229|ref|YP_448461.1|	-	5.2	7.4	5.8	0.96	9.8	0.5	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1269)
FeoB_C	PF07664.12	gi|84490229|ref|YP_448461.1|	-	5.2	6.8	10.4	0.99	9.1	0.4	3.0	2	1	1	3	3	3	0	Ferrous	iron	transport	protein	B	C	terminus
MnhB	PF04039.13	gi|84490230|ref|YP_448462.1|	-	3.1e-23	82.4	11.4	4e-23	82.1	11.4	1.1	1	0	0	1	1	1	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2105	PF09878.9	gi|84490230|ref|YP_448462.1|	-	0.2	11.3	5.6	0.16	11.7	4.4	1.6	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2105)
DUF2106	PF09879.9	gi|84490231|ref|YP_448463.1|	-	0.013	15.0	0.5	0.016	14.7	0.4	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2106)
DUF2207	PF09972.9	gi|84490232|ref|YP_448464.1|	-	0.37	9.5	1.6	0.46	9.2	1.6	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Proton_antipo_M	PF00361.20	gi|84490233|ref|YP_448465.1|	-	3.1e-35	121.8	26.9	3.1e-35	121.8	26.9	1.9	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
NADHdeh_related	PF10125.9	gi|84490233|ref|YP_448465.1|	-	5.2e-05	22.7	8.4	5.2e-05	22.7	8.4	2.9	1	1	0	2	2	2	2	NADH	dehydrogenase	I,	subunit	N	related	protein
Oxidored_q2	PF00420.24	gi|84490234|ref|YP_448466.1|	-	2.4e-22	78.5	8.6	3e-22	78.2	8.6	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.9	gi|84490234|ref|YP_448466.1|	-	0.0023	17.9	4.4	0.0023	17.9	4.4	1.8	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2108)
LapA_dom	PF06305.11	gi|84490234|ref|YP_448466.1|	-	0.12	12.2	0.3	0.12	12.2	0.3	2.4	2	0	0	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
ATP1G1_PLM_MAT8	PF02038.16	gi|84490234|ref|YP_448466.1|	-	0.17	11.4	1.6	0.4	10.2	1.6	1.6	1	0	0	1	1	1	0	ATP1G1/PLM/MAT8	family
Gram_pos_anchor	PF00746.21	gi|84490234|ref|YP_448466.1|	-	1.1	9.2	4.9	15	5.6	0.2	2.6	2	0	0	2	2	2	0	LPXTG	cell	wall	anchor	motif
Trp_oprn_chp	PF09534.10	gi|84490234|ref|YP_448466.1|	-	4.6	7.0	5.9	9.9	5.9	5.9	1.6	1	1	0	1	1	1	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
DUF4040	PF13244.6	gi|84490235|ref|YP_448467.1|	-	8.5e-16	57.9	9.5	1e-15	57.6	9.5	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
ThrE	PF06738.12	gi|84490235|ref|YP_448467.1|	-	0.019	14.3	1.9	0.021	14.2	1.9	1.0	1	0	0	1	1	1	0	Putative	threonine/serine	exporter
DUF2070	PF09843.9	gi|84490235|ref|YP_448467.1|	-	0.27	9.5	3.1	0.3	9.3	3.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DUF202	PF02656.15	gi|84490236|ref|YP_448468.1|	-	2.1	8.9	5.9	0.32	11.5	0.6	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
PhaG_MnhG_YufB	PF03334.14	gi|84490236|ref|YP_448468.1|	-	3.1	8.1	12.0	3.1e+02	1.7	12.0	2.9	1	1	0	1	1	1	0	Na+/H+	antiporter	subunit
MrpF_PhaF	PF04066.13	gi|84490237|ref|YP_448469.1|	-	0.0026	18.1	8.7	0.0026	18.1	8.7	1.8	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2142	PF09913.9	gi|84490237|ref|YP_448469.1|	-	0.0081	15.1	2.5	0.0084	15.0	2.5	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2142)
MNHE	PF01899.16	gi|84490238|ref|YP_448470.1|	-	2.5e-17	63.0	0.4	2.7e-17	62.9	0.4	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
YdjM	PF04307.14	gi|84490239|ref|YP_448471.1|	-	4.3e-19	68.5	6.3	2e-18	66.3	6.3	2.0	1	1	0	1	1	1	1	LexA-binding,	inner	membrane-associated	putative	hydrolase
Arginosuc_synth	PF00764.19	gi|84490240|ref|YP_448472.1|	-	4.7e-168	559.5	0.7	5.4e-168	559.3	0.7	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
Asn_synthase	PF00733.21	gi|84490240|ref|YP_448472.1|	-	4.9e-05	23.2	0.0	9.9e-05	22.2	0.0	1.4	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.13	gi|84490240|ref|YP_448472.1|	-	0.00063	19.3	0.0	0.0017	17.9	0.0	1.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|84490240|ref|YP_448472.1|	-	0.022	13.6	0.0	0.04	12.7	0.0	1.4	1	0	0	1	1	1	0	tRNA	methyl	transferase
NAD_synthase	PF02540.17	gi|84490240|ref|YP_448472.1|	-	0.031	13.4	0.0	0.052	12.7	0.0	1.3	1	0	0	1	1	1	0	NAD	synthase
ATP_bind_3	PF01171.20	gi|84490240|ref|YP_448472.1|	-	0.15	11.8	0.0	0.38	10.5	0.0	1.7	1	0	0	1	1	1	0	PP-loop	family
Pyr_redox_2	PF07992.14	gi|84490241|ref|YP_448473.1|	-	7e-65	219.2	1.8	1.2e-64	218.4	1.8	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|84490241|ref|YP_448473.1|	-	1.1e-26	93.2	7.7	6.6e-19	68.3	0.2	4.3	5	0	0	5	5	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|84490241|ref|YP_448473.1|	-	4.4e-20	72.1	7.1	1.9e-14	53.6	1.8	2.7	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|84490241|ref|YP_448473.1|	-	2.5e-12	46.2	4.1	0.0045	15.8	0.0	4.5	4	1	1	5	5	5	4	HI0933-like	protein
Pyr_redox_dim	PF02852.22	gi|84490241|ref|YP_448473.1|	-	4.1e-12	46.3	0.2	1.2e-11	44.8	0.2	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Thi4	PF01946.17	gi|84490241|ref|YP_448473.1|	-	1.5e-08	34.2	0.3	0.00025	20.4	0.0	3.2	3	0	0	3	3	3	2	Thi4	family
DAO	PF01266.24	gi|84490241|ref|YP_448473.1|	-	2.1e-08	34.1	3.4	0.15	11.6	0.1	4.1	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.6	gi|84490241|ref|YP_448473.1|	-	2.6e-08	33.4	0.0	1.1e-05	24.8	0.0	2.7	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_8	PF13450.6	gi|84490241|ref|YP_448473.1|	-	4e-08	33.4	0.0	0.00069	19.8	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|84490241|ref|YP_448473.1|	-	7.1e-07	28.6	0.5	0.072	12.2	0.0	3.9	4	0	0	4	4	4	2	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|84490241|ref|YP_448473.1|	-	5.4e-06	26.8	0.0	0.036	14.5	0.0	2.7	2	0	0	2	2	2	2	Putative	NAD(P)-binding
NAD_binding_9	PF13454.6	gi|84490241|ref|YP_448473.1|	-	7.2e-06	26.1	0.6	3.3	7.7	0.0	4.0	3	1	1	4	4	4	2	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|84490241|ref|YP_448473.1|	-	3e-05	23.3	2.4	0.19	10.7	0.2	3.5	2	2	2	4	4	4	2	Lycopene	cyclase	protein
Amino_oxidase	PF01593.24	gi|84490241|ref|YP_448473.1|	-	0.00015	21.2	0.1	0.35	10.1	0.0	2.4	1	1	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
PK_C	PF02887.16	gi|84490241|ref|YP_448473.1|	-	0.0019	18.4	0.3	0.036	14.3	0.0	3.0	3	1	0	3	3	2	1	Pyruvate	kinase,	alpha/beta	domain
GIDA	PF01134.22	gi|84490241|ref|YP_448473.1|	-	0.0021	17.2	8.3	0.23	10.5	0.0	4.0	3	1	1	4	4	4	1	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.19	gi|84490241|ref|YP_448473.1|	-	0.0023	17.3	1.2	0.19	11.0	0.1	2.5	3	0	0	3	3	3	1	FAD	binding	domain
IlvN	PF07991.12	gi|84490241|ref|YP_448473.1|	-	0.0047	16.5	1.1	2.2	7.8	0.0	2.8	3	0	0	3	3	3	2	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
TrkA_N	PF02254.18	gi|84490241|ref|YP_448473.1|	-	0.014	15.7	1.7	2.8	8.2	0.1	3.6	5	0	0	5	5	4	0	TrkA-N	domain
Response_reg	PF00072.24	gi|84490241|ref|YP_448473.1|	-	0.032	14.4	0.0	0.28	11.4	0.0	2.5	2	0	0	2	2	2	0	Response	regulator	receiver	domain
3HCDH_N	PF02737.18	gi|84490241|ref|YP_448473.1|	-	0.049	13.5	0.1	0.049	13.5	0.1	3.2	3	1	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_oxidored	PF12831.7	gi|84490241|ref|YP_448473.1|	-	0.054	12.8	0.4	12	5.1	0.0	2.8	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
Sigma70_r1_1	PF03979.14	gi|84490241|ref|YP_448473.1|	-	0.089	12.9	6.9	0.52	10.4	0.1	2.9	3	0	0	3	3	2	0	Sigma-70	factor,	region	1.1
ApbA	PF02558.16	gi|84490241|ref|YP_448473.1|	-	0.19	11.3	3.5	3.3	7.3	1.0	2.8	2	1	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
Trp_halogenase	PF04820.14	gi|84490241|ref|YP_448473.1|	-	0.2	10.5	0.1	0.2	10.5	0.1	2.1	2	1	1	3	3	3	0	Tryptophan	halogenase
DUF903	PF06004.12	gi|84490241|ref|YP_448473.1|	-	1.3	8.9	5.7	0.4	10.6	1.6	2.3	3	0	0	3	3	1	0	Bacterial	protein	of	unknown	function	(DUF903)
AlaDh_PNT_C	PF01262.21	gi|84490241|ref|YP_448473.1|	-	1.7	7.9	7.5	6.3	6.0	0.0	3.2	3	1	1	4	4	4	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Oxidored_nitro	PF00148.19	gi|84490242|ref|YP_448474.1|	-	4.4e-25	88.3	0.2	6.8e-25	87.6	0.2	1.2	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
UDPG_MGDP_dh	PF00984.19	gi|84490243|ref|YP_448475.1|	-	2e-12	47.1	0.4	3.9e-12	46.2	0.4	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|84490243|ref|YP_448475.1|	-	4.8e-06	26.9	1.8	7.2e-06	26.4	0.3	2.1	2	1	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
MMR_HSR1_C	PF08438.10	gi|84490244|ref|YP_448476.1|	-	2.9e-38	130.9	1.8	5e-38	130.1	1.8	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|84490244|ref|YP_448476.1|	-	1.3e-21	76.8	0.0	2.9e-20	72.5	0.0	2.7	2	1	1	3	3	3	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|84490244|ref|YP_448476.1|	-	4.1e-11	42.6	0.4	3.5e-08	33.1	0.0	2.7	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
TGS	PF02824.21	gi|84490244|ref|YP_448476.1|	-	4.6e-09	36.2	0.0	1e-08	35.1	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
MMR_HSR1_Xtn	PF16897.5	gi|84490244|ref|YP_448476.1|	-	0.0025	17.8	0.1	0.007	16.4	0.1	1.9	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
RsgA_GTPase	PF03193.16	gi|84490244|ref|YP_448476.1|	-	0.016	15.1	0.4	0.27	11.1	0.2	2.2	2	0	0	2	2	2	0	RsgA	GTPase
AAA_24	PF13479.6	gi|84490244|ref|YP_448476.1|	-	0.018	14.7	0.1	5.5	6.7	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
YchF-GTPase_C	PF06071.13	gi|84490244|ref|YP_448476.1|	-	0.16	12.2	0.1	0.78	10.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF933)
TP_methylase	PF00590.20	gi|84490245|ref|YP_448477.1|	-	2.6e-33	115.8	0.0	3.2e-33	115.5	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CarboxypepD_reg	PF13620.6	gi|84490246|ref|YP_448478.1|	-	5.7e-55	183.5	117.4	2.1e-10	40.7	0.9	14.1	12	2	2	14	14	13	8	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|84490246|ref|YP_448478.1|	-	9.3e-43	144.3	224.1	4.6e-07	29.9	8.5	16.6	15	2	3	18	18	15	11	Bacterial	Ig-like	domain	(group	3)
CarbopepD_reg_2	PF13715.6	gi|84490246|ref|YP_448478.1|	-	3.2e-21	75.1	93.9	7.6e-05	22.6	1.2	11.9	12	1	1	13	13	13	8	CarboxypepD_reg-like	domain
Invasin_D3	PF09134.10	gi|84490246|ref|YP_448478.1|	-	8.7e-16	58.0	200.3	0.00021	21.5	4.2	17.0	12	4	6	18	18	17	11	Invasin,	domain	3
MG2	PF01835.19	gi|84490246|ref|YP_448478.1|	-	1.4e-09	38.3	16.1	6	7.4	0.1	10.2	8	0	0	8	8	8	2	MG2	domain
Big_1	PF02369.16	gi|84490246|ref|YP_448478.1|	-	9.9e-07	28.7	21.4	8.8e-05	22.4	4.3	17.8	17	2	0	17	17	15	9	Bacterial	Ig-like	domain	(group	1)
Beta_helix	PF13229.6	gi|84490246|ref|YP_448478.1|	-	3.9e-05	23.6	35.7	3.9e-05	23.6	35.7	13.5	6	4	8	14	14	8	3	Right	handed	beta	helix	region
TraI_2	PF07514.11	gi|84490246|ref|YP_448478.1|	-	0.077	11.9	0.7	28	3.5	0.0	3.2	3	0	0	3	3	3	0	Putative	helicase
Pollen_Ole_e_I	PF01190.17	gi|84490246|ref|YP_448478.1|	-	0.22	11.9	7.5	42	4.6	0.1	5.4	5	0	0	5	5	5	0	Pollen	proteins	Ole	e	I	like
MG4	PF17789.1	gi|84490246|ref|YP_448478.1|	-	0.23	11.6	96.3	0.3	11.3	0.6	14.5	14	2	1	15	15	14	0	Macroglobulin	domain	MG4
Filamin	PF00630.19	gi|84490246|ref|YP_448478.1|	-	1.2	10.0	52.8	0.052	14.4	0.5	9.6	8	5	1	9	9	8	0	Filamin/ABP280	repeat
Peptidase_M50	PF02163.22	gi|84490247|ref|YP_448479.1|	-	2.8e-23	82.5	0.0	4.8e-13	49.0	0.0	2.3	1	1	1	2	2	2	2	Peptidase	family	M50
PDZ_2	PF13180.6	gi|84490247|ref|YP_448479.1|	-	8.4e-05	22.8	0.0	0.00017	21.9	0.0	1.4	1	0	0	1	1	1	1	PDZ	domain
DctQ	PF04290.12	gi|84490247|ref|YP_448479.1|	-	1.1	9.2	13.0	3.6	7.5	7.3	3.4	3	1	0	3	3	3	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
AIRS_C	PF02769.22	gi|84490248|ref|YP_448480.1|	-	2.8e-50	170.5	0.0	2.5e-31	108.9	0.1	2.3	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|84490248|ref|YP_448480.1|	-	1.5e-47	160.2	1.6	9.7e-23	80.6	0.1	2.5	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
FGAR-AT_linker	PF18072.1	gi|84490248|ref|YP_448480.1|	-	3.8e-12	46.6	0.1	8.6e-12	45.4	0.1	1.7	1	0	0	1	1	1	1	Formylglycinamide	ribonucleotide	amidotransferase	linker	domain
tRNA-synt_1	PF00133.22	gi|84490249|ref|YP_448481.1|	-	8.5e-204	678.2	4.8	1.2e-203	677.7	4.8	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|84490249|ref|YP_448481.1|	-	2.9e-30	105.3	0.2	8.1e-30	103.8	0.2	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|84490249|ref|YP_448481.1|	-	8.8e-26	90.6	9.6	1.3e-12	47.2	0.1	3.7	4	0	0	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.18	gi|84490249|ref|YP_448481.1|	-	4.3e-10	39.0	0.0	2.3e-06	26.8	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.19	gi|84490249|ref|YP_448481.1|	-	2.5e-07	30.4	0.0	7.5e-07	28.8	0.0	1.8	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.6	gi|84490249|ref|YP_448481.1|	-	0.028	13.9	0.3	0.16	11.5	0.0	2.4	2	1	0	2	2	2	0	Leucyl-tRNA	synthetase,	Domain	2
IBR	PF01485.21	gi|84490249|ref|YP_448481.1|	-	0.45	10.8	3.2	4.4	7.6	0.1	3.1	3	0	0	3	3	3	0	IBR	domain,	a	half	RING-finger	domain
FMN_red	PF03358.15	gi|84490250|ref|YP_448482.1|	-	3.4e-22	78.8	0.0	4.9e-22	78.4	0.0	1.3	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|84490250|ref|YP_448482.1|	-	7.8e-15	55.1	0.0	9.4e-15	54.8	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|84490250|ref|YP_448482.1|	-	0.00085	19.6	0.0	0.044	14.0	0.0	2.4	2	0	0	2	2	2	1	Flavodoxin	domain
AdoMet_Synthase	PF01941.19	gi|84490251|ref|YP_448483.1|	-	1.7e-171	570.4	7.6	2e-171	570.2	7.6	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF3963	PF13124.6	gi|84490251|ref|YP_448483.1|	-	0.14	12.1	1.1	3.1	7.9	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3963)
DUF192	PF02643.15	gi|84490252|ref|YP_448484.1|	-	5.3e-09	36.1	0.0	6.2e-09	35.9	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1430
DUF3010	PF11215.8	gi|84490252|ref|YP_448484.1|	-	0.042	14.1	0.6	0.051	13.9	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3010)
Metallophos	PF00149.28	gi|84490253|ref|YP_448485.1|	-	3.1e-11	44.2	0.7	5e-11	43.5	0.7	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84490253|ref|YP_448485.1|	-	8.8e-08	32.5	0.1	1.3e-07	32.0	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Flavoprotein	PF02441.19	gi|84490254|ref|YP_448486.1|	-	1.4e-19	70.4	0.8	1.4e-19	70.4	0.8	1.5	2	0	0	2	2	2	1	Flavoprotein
Fer4_7	PF12838.7	gi|84490254|ref|YP_448486.1|	-	6.3e-08	33.1	5.6	6.4e-05	23.5	0.5	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490254|ref|YP_448486.1|	-	4.4e-07	29.7	14.0	0.0026	17.7	3.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|84490254|ref|YP_448486.1|	-	8.5e-07	28.5	15.3	3.9e-05	23.3	3.2	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|84490254|ref|YP_448486.1|	-	1.3e-05	25.2	17.2	0.00013	22.0	2.9	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490254|ref|YP_448486.1|	-	2.2e-05	25.3	3.4	2.2e-05	25.3	3.4	3.0	2	1	1	3	3	3	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|84490254|ref|YP_448486.1|	-	0.00037	20.4	15.6	0.04	14.0	3.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|84490254|ref|YP_448486.1|	-	0.00051	20.4	2.7	0.0065	16.9	0.3	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490254|ref|YP_448486.1|	-	0.00073	19.7	14.1	0.0057	16.8	3.4	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490254|ref|YP_448486.1|	-	0.0011	19.0	10.6	0.013	15.6	3.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|84490254|ref|YP_448486.1|	-	0.0019	18.7	0.8	0.0019	18.7	0.8	3.4	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|84490254|ref|YP_448486.1|	-	0.0057	17.2	3.0	0.0057	17.2	3.0	2.5	1	1	1	3	3	2	1	4Fe-4S	dicluster	domain
DUF3160	PF11369.8	gi|84490254|ref|YP_448486.1|	-	0.034	12.6	0.6	0.049	12.1	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3160)
MipZ	PF09140.11	gi|84490254|ref|YP_448486.1|	-	0.06	12.6	0.1	0.083	12.2	0.1	1.2	1	0	0	1	1	1	0	ATPase	MipZ
Asparaginase_C	PF17763.1	gi|84490254|ref|YP_448486.1|	-	0.083	13.1	0.0	0.19	11.9	0.0	1.5	1	1	0	1	1	1	0	Glutaminase/Asparaginase	C-terminal	domain
Fer4_4	PF12800.7	gi|84490254|ref|YP_448486.1|	-	0.087	13.4	2.7	0.087	13.4	2.7	2.7	2	1	0	2	2	1	0	4Fe-4S	binding	domain
Imm42	PF15593.6	gi|84490254|ref|YP_448486.1|	-	0.091	13.2	3.8	0.15	12.6	0.4	2.0	2	0	0	2	2	2	0	Immunity	protein	42
Fer4_20	PF14691.6	gi|84490254|ref|YP_448486.1|	-	0.27	11.0	15.5	0.2	11.4	2.9	2.5	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_15	PF13459.6	gi|84490254|ref|YP_448486.1|	-	0.67	10.7	7.2	28	5.5	0.2	3.4	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Cauli_DNA-bind	PF03310.13	gi|84490254|ref|YP_448486.1|	-	1.4	9.0	8.8	0.12	12.4	0.7	2.7	3	0	0	3	3	3	0	Caulimovirus	DNA-binding	protein
NADH_4Fe-4S	PF10589.9	gi|84490254|ref|YP_448486.1|	-	8.9	6.5	9.2	0.37	10.9	0.3	2.8	2	1	0	2	2	2	0	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
Phage_holin_4_2	PF04020.13	gi|84490255|ref|YP_448487.1|	-	8.8e-10	39.2	24.8	1.5e-09	38.4	24.8	1.4	1	0	0	1	1	1	1	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
Phosphodiest	PF01663.22	gi|84490255|ref|YP_448487.1|	-	1.7e-08	34.5	0.1	1.5e-07	31.3	0.1	2.0	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.12	gi|84490255|ref|YP_448487.1|	-	0.031	14.4	0.1	0.062	13.4	0.1	1.4	1	0	0	1	1	1	0	PglZ	domain
SHMT	PF00464.19	gi|84490256|ref|YP_448488.1|	-	9.3e-83	278.0	0.1	1.2e-82	277.7	0.1	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.21	gi|84490256|ref|YP_448488.1|	-	5e-11	42.4	0.0	1.3e-10	41.0	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|84490256|ref|YP_448488.1|	-	7.6e-06	25.1	0.1	1e-05	24.7	0.1	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.13	gi|84490256|ref|YP_448488.1|	-	7.8e-06	25.1	0.1	5.6e-05	22.3	0.0	2.1	2	0	0	2	2	2	1	L-seryl-tRNA	selenium	transferase
Beta_elim_lyase	PF01212.21	gi|84490256|ref|YP_448488.1|	-	9.1e-06	25.2	0.0	1.4e-05	24.6	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.17	gi|84490256|ref|YP_448488.1|	-	0.00021	20.7	0.2	0.00039	19.8	0.2	1.5	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|84490256|ref|YP_448488.1|	-	0.013	14.1	0.1	0.032	12.8	0.1	1.7	1	1	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Pyr_redox_2	PF07992.14	gi|84490257|ref|YP_448489.1|	-	3.3e-21	75.8	0.0	1.8e-20	73.4	0.0	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.27	gi|84490257|ref|YP_448489.1|	-	9.6e-20	69.5	40.1	9.2e-06	25.3	4.2	4.9	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|84490257|ref|YP_448489.1|	-	3e-13	50.5	24.1	0.003	18.5	0.2	5.1	5	0	0	5	5	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|84490257|ref|YP_448489.1|	-	5.4e-11	42.9	40.2	1.6e-05	25.4	13.0	4.6	3	2	2	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490257|ref|YP_448489.1|	-	6.6e-11	42.2	34.9	0.0008	19.5	0.5	4.6	3	2	2	5	5	4	4	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|84490257|ref|YP_448489.1|	-	1.2e-09	37.8	49.7	0.001	19.0	5.0	5.7	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84490257|ref|YP_448489.1|	-	1.9e-09	37.0	38.9	0.0017	18.3	3.1	5.3	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|84490257|ref|YP_448489.1|	-	1.3e-08	34.8	41.4	7.8e-06	26.0	12.2	4.2	4	1	1	5	5	4	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490257|ref|YP_448489.1|	-	6.1e-08	32.7	49.3	0.0028	17.8	1.9	5.7	5	2	2	7	7	6	5	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|84490257|ref|YP_448489.1|	-	1.5e-05	25.1	31.1	0.057	13.9	1.2	5.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Pyr_redox	PF00070.27	gi|84490257|ref|YP_448489.1|	-	7.4e-05	23.2	0.0	0.0057	17.2	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_15	PF13459.6	gi|84490257|ref|YP_448489.1|	-	0.00015	22.5	29.1	0.079	13.7	0.7	4.9	3	1	1	4	4	4	3	4Fe-4S	single	cluster	domain
DAO	PF01266.24	gi|84490257|ref|YP_448489.1|	-	0.00022	20.9	0.2	0.023	14.3	0.1	2.9	4	0	0	4	4	4	1	FAD	dependent	oxidoreductase
Fer4_8	PF13183.6	gi|84490257|ref|YP_448489.1|	-	0.00026	21.4	30.8	0.021	15.3	0.1	4.8	4	1	0	4	4	3	2	4Fe-4S	dicluster	domain
FAD_oxidored	PF12831.7	gi|84490257|ref|YP_448489.1|	-	0.00087	18.7	0.2	0.0016	17.9	0.2	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer4_17	PF13534.6	gi|84490257|ref|YP_448489.1|	-	0.00089	19.8	34.1	0.0023	18.4	7.2	4.8	3	2	4	7	7	7	4	4Fe-4S	dicluster	domain
GIDA	PF01134.22	gi|84490257|ref|YP_448489.1|	-	0.00092	18.4	0.0	0.0023	17.1	0.0	1.6	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
AlaDh_PNT_C	PF01262.21	gi|84490257|ref|YP_448489.1|	-	0.001	18.4	0.0	0.0034	16.7	0.0	1.8	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_22	PF17179.4	gi|84490257|ref|YP_448489.1|	-	0.0013	19.5	24.3	0.11	13.4	0.8	4.7	4	0	0	4	4	4	1	4Fe-4S	dicluster	domain
NAD_binding_8	PF13450.6	gi|84490257|ref|YP_448489.1|	-	0.0031	17.7	0.0	0.0076	16.5	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_13	PF13370.6	gi|84490257|ref|YP_448489.1|	-	0.021	15.3	33.6	0.038	14.5	1.2	4.9	5	0	0	5	5	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Pyr_redox_3	PF13738.6	gi|84490257|ref|YP_448489.1|	-	0.023	14.0	0.0	0.25	10.5	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|84490257|ref|YP_448489.1|	-	0.04	13.0	0.0	0.06	12.4	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|84490257|ref|YP_448489.1|	-	0.075	12.3	0.2	0.12	11.6	0.2	1.3	1	0	0	1	1	1	0	FAD	binding	domain
HI0933_like	PF03486.14	gi|84490257|ref|YP_448489.1|	-	0.25	10.0	0.3	0.48	9.1	0.1	1.5	2	0	0	2	2	2	0	HI0933-like	protein
Fer4_18	PF13746.6	gi|84490257|ref|YP_448489.1|	-	0.66	10.2	27.2	0.11	12.8	6.7	4.3	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Mem_trans	PF03547.18	gi|84490258|ref|YP_448490.1|	-	6.7e-30	103.7	28.6	4.5e-18	64.8	8.4	2.0	1	1	1	2	2	2	2	Membrane	transport	protein
OrfB_IS605	PF01385.19	gi|84490259|ref|YP_448491.1|	-	2.1e-20	73.2	0.4	7.5e-20	71.4	0.4	1.9	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.11	gi|84490259|ref|YP_448491.1|	-	4.1e-16	58.7	1.2	4.1e-16	58.7	1.2	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.8	gi|84490259|ref|YP_448491.1|	-	1.2e-08	34.2	3.5	1.2e-08	34.2	3.5	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
RuvC_1	PF18516.1	gi|84490259|ref|YP_448491.1|	-	0.00068	18.9	9.0	0.0015	17.8	9.0	1.6	1	0	0	1	1	1	1	RuvC	nuclease	domain
HSR	PF03172.13	gi|84490259|ref|YP_448491.1|	-	0.0027	17.8	8.6	0.014	15.5	2.4	3.1	3	0	0	3	3	3	1	HSR	domain
HypA	PF01155.19	gi|84490259|ref|YP_448491.1|	-	0.083	12.9	0.1	0.22	11.5	0.1	1.8	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_10	PF10058.9	gi|84490259|ref|YP_448491.1|	-	0.13	12.0	3.0	0.29	10.9	3.0	1.6	1	0	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
VD10_N	PF08476.10	gi|84490259|ref|YP_448491.1|	-	0.19	11.4	5.5	0.16	11.6	2.0	2.8	3	0	0	3	3	3	0	Viral	D10	N-terminal
zf-ribbon_3	PF13248.6	gi|84490259|ref|YP_448491.1|	-	0.51	9.8	4.0	9.8	5.7	0.6	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|84490259|ref|YP_448491.1|	-	0.84	9.0	6.4	0.64	9.4	0.4	2.6	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
UbiD	PF01977.16	gi|84490260|ref|YP_448492.1|	-	3.3e-107	358.9	0.2	4.1e-107	358.5	0.2	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Peptidase_C31	PF05410.13	gi|84490260|ref|YP_448492.1|	-	0.12	12.4	0.0	0.3	11.2	0.0	1.6	1	0	0	1	1	1	0	Porcine	arterivirus-type	cysteine	proteinase	alpha
AIRC	PF00731.20	gi|84490261|ref|YP_448493.1|	-	1e-90	300.9	1.3	2.2e-48	163.6	0.1	2.0	2	0	0	2	2	2	2	AIR	carboxylase
DNA_pol_D_N	PF18018.1	gi|84490261|ref|YP_448493.1|	-	0.064	13.4	0.5	0.12	12.5	0.5	1.5	1	0	0	1	1	1	0	DNA	polymerase	delta	subunit	OB-fold	domain
Glycos_transf_2	PF00535.26	gi|84490262|ref|YP_448494.1|	-	5e-26	91.5	0.0	1e-25	90.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|84490262|ref|YP_448494.1|	-	1.4e-06	28.4	0.3	2.4e-06	27.6	0.3	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|84490262|ref|YP_448494.1|	-	2.6e-06	27.1	0.5	4.6e-06	26.3	0.5	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|84490262|ref|YP_448494.1|	-	0.0011	19.4	0.0	0.0026	18.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
CDC48_N	PF02359.18	gi|84490262|ref|YP_448494.1|	-	0.0019	18.4	0.0	0.01	16.0	0.0	2.3	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
SLATT_6	PF18169.1	gi|84490262|ref|YP_448494.1|	-	0.016	14.8	5.7	0.062	12.9	5.7	2.0	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
Phtf-FEM1B_bdg	PF12129.8	gi|84490262|ref|YP_448494.1|	-	0.56	10.0	7.2	1.6	8.5	7.2	1.7	1	0	0	1	1	1	0	Male	germ-cell	putative	homeodomain	transcription	factor
DUF4234	PF14018.6	gi|84490262|ref|YP_448494.1|	-	0.74	10.0	7.7	3.9	7.7	7.7	2.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4234)
DUF1743	PF08489.11	gi|84490263|ref|YP_448495.1|	-	1.3e-10	41.4	1.7	1.2e-07	31.7	0.4	3.7	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
RLL	PF10036.9	gi|84490263|ref|YP_448495.1|	-	0.0036	17.2	0.2	0.0048	16.8	0.2	1.2	1	0	0	1	1	1	1	RNA	transcription,	translation	and	transport	factor	protein
SL4P	PF17618.2	gi|84490263|ref|YP_448495.1|	-	0.03	14.4	0.2	0.066	13.3	0.2	1.6	1	0	0	1	1	1	0	Uncharacterized	Strongylid	L4	protein
Ras	PF00071.22	gi|84490263|ref|YP_448495.1|	-	0.13	11.9	2.2	0.21	11.2	2.2	1.5	1	1	0	1	1	1	0	Ras	family
DMRL_synthase	PF00885.19	gi|84490264|ref|YP_448496.1|	-	2.3e-34	118.2	0.2	2.5e-34	118.1	0.2	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Iso_dh	PF00180.20	gi|84490265|ref|YP_448497.1|	-	2.9e-102	342.4	0.1	3.3e-102	342.2	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Aconitase_C	PF00694.19	gi|84490266|ref|YP_448498.1|	-	1.9e-22	80.0	0.1	3.9e-22	79.0	0.0	1.6	2	0	0	2	2	2	1	Aconitase	C-terminal	domain
Aconitase	PF00330.20	gi|84490267|ref|YP_448499.1|	-	2.5e-101	340.0	4.9	6.6e-99	332.0	4.9	2.2	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|84490267|ref|YP_448499.1|	-	0.00069	18.4	0.0	0.001	17.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
tRNA_anti-codon	PF01336.25	gi|84490268|ref|YP_448500.1|	-	1.2e-41	140.5	26.2	6.2e-12	45.3	0.5	6.9	7	0	0	7	7	7	6	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|84490268|ref|YP_448500.1|	-	6e-23	81.7	19.0	8.2e-06	25.7	0.4	5.5	5	0	0	5	5	5	5	Cell	division	control	protein	24,	OB	domain	3
Rep_fac-A_C	PF08646.10	gi|84490268|ref|YP_448500.1|	-	1e-20	74.0	12.2	2.1e-18	66.5	0.5	5.6	7	0	0	7	7	7	1	Replication	factor-A	C	terminal	domain
REPA_OB_2	PF16900.5	gi|84490268|ref|YP_448500.1|	-	5.3e-18	64.8	30.8	3.7e-06	26.8	0.2	7.0	6	1	1	7	7	7	5	Replication	protein	A	OB	domain
tRNA_anti_2	PF13742.6	gi|84490268|ref|YP_448500.1|	-	8.4e-06	25.9	2.2	3	8.1	0.0	5.6	7	0	0	7	7	7	1	OB-fold	nucleic	acid	binding	domain
MlaD	PF02470.20	gi|84490268|ref|YP_448500.1|	-	0.00029	21.1	5.6	3.8	7.9	0.1	4.9	4	0	0	4	4	4	1	MlaD	protein
POT1	PF02765.17	gi|84490268|ref|YP_448500.1|	-	0.0012	18.6	1.1	0.73	9.7	0.0	4.3	4	0	0	4	4	4	1	Telomeric	single	stranded	DNA	binding	POT1/CDC13
DUF4539	PF15072.6	gi|84490268|ref|YP_448500.1|	-	0.0017	18.4	8.3	3.6	7.7	0.0	5.9	6	1	0	6	6	6	1	Domain	of	unknown	function	(DUF4539)
zinc-ribbons_6	PF07191.12	gi|84490268|ref|YP_448500.1|	-	0.0044	17.0	0.1	0.0074	16.3	0.1	1.3	1	0	0	1	1	1	1	zinc-ribbons
TF_Zn_Ribbon	PF08271.12	gi|84490268|ref|YP_448500.1|	-	0.018	14.6	3.5	0.05	13.1	3.5	1.8	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF961	PF06125.11	gi|84490268|ref|YP_448500.1|	-	0.054	13.9	1.0	3.1	8.2	0.0	4.0	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF961)
RecJ_OB	PF17768.1	gi|84490268|ref|YP_448500.1|	-	0.061	13.6	3.4	14	6.0	0.1	4.7	4	0	0	4	4	4	0	RecJ	OB	domain
HIN	PF02760.15	gi|84490268|ref|YP_448500.1|	-	0.091	12.5	16.2	1.6	8.4	0.3	4.8	4	1	1	5	5	5	0	HIN-200/IF120x	domain
SLD5_C	PF16922.5	gi|84490268|ref|YP_448500.1|	-	0.12	12.5	0.2	12	6.1	0.0	3.0	2	0	0	2	2	2	0	DNA	replication	complex	GINS	protein	SLD5	C-terminus
DZR	PF12773.7	gi|84490268|ref|YP_448500.1|	-	0.14	12.2	0.3	0.26	11.3	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF3127	PF11325.8	gi|84490268|ref|YP_448500.1|	-	1.1	9.6	9.3	0.15	12.3	0.5	4.1	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF3127)
DUF4428	PF14471.6	gi|84490268|ref|YP_448500.1|	-	2.8	7.9	7.0	0.47	10.4	0.6	3.2	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF4428)
Rad51	PF08423.11	gi|84490269|ref|YP_448501.1|	-	1.2e-90	303.3	0.2	1.4e-90	303.0	0.2	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|84490269|ref|YP_448501.1|	-	5.9e-16	58.7	0.7	7.8e-16	58.3	0.7	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
ATPase	PF06745.13	gi|84490269|ref|YP_448501.1|	-	6.6e-13	48.5	0.8	1.2e-12	47.7	0.8	1.4	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|84490269|ref|YP_448501.1|	-	3.7e-07	29.9	0.0	7.8e-07	28.9	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
HHH_2	PF12826.7	gi|84490269|ref|YP_448501.1|	-	3.5e-06	27.0	0.3	1.1e-05	25.4	0.1	2.1	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|84490269|ref|YP_448501.1|	-	4.5e-06	27.2	0.4	1.4e-05	25.6	0.4	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
Cdd1	PF11731.8	gi|84490269|ref|YP_448501.1|	-	2.9e-05	24.2	0.0	5.8e-05	23.2	0.0	1.5	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_22	PF13401.6	gi|84490269|ref|YP_448501.1|	-	0.00019	21.7	0.2	0.00037	20.8	0.2	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|84490269|ref|YP_448501.1|	-	0.0017	18.1	0.0	0.0039	16.9	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|84490269|ref|YP_448501.1|	-	0.014	16.0	0.0	0.033	14.7	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Abhydrolase_5	PF12695.7	gi|84490269|ref|YP_448501.1|	-	0.032	14.0	0.0	0.058	13.2	0.0	1.4	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
HEPN_RiboL-PSP	PF18735.1	gi|84490269|ref|YP_448501.1|	-	0.035	14.0	0.0	0.052	13.5	0.0	1.3	1	0	0	1	1	1	0	RiboL-PSP-HEPN
HHH	PF00633.23	gi|84490269|ref|YP_448501.1|	-	0.057	13.3	1.8	0.26	11.2	0.0	2.9	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
IMS_HHH	PF11798.8	gi|84490269|ref|YP_448501.1|	-	0.067	13.5	0.0	0.27	11.6	0.0	2.1	2	0	0	2	2	2	0	IMS	family	HHH	motif
PAXNEB	PF05625.11	gi|84490269|ref|YP_448501.1|	-	1.1	8.3	5.3	2.2	7.3	0.5	2.1	1	1	1	2	2	2	0	PAXNEB	protein
Na_H_Exchanger	PF00999.21	gi|84490270|ref|YP_448502.1|	-	3.2e-31	108.5	47.6	4.4e-31	108.0	47.6	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
DUF5493	PF17597.2	gi|84490270|ref|YP_448502.1|	-	0.02	15.1	2.0	0.02	15.1	2.0	3.4	3	2	1	4	4	4	0	Family	of	unknown	function	(DUF5493)
PHP_C	PF13263.6	gi|84490272|ref|YP_448504.1|	-	5.6e-14	51.6	0.0	1.2e-13	50.6	0.0	1.6	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.19	gi|84490272|ref|YP_448504.1|	-	1.7e-07	31.7	0.1	2.3e-07	31.2	0.1	1.5	1	1	0	1	1	1	1	PHP	domain
AIRC	PF00731.20	gi|84490273|ref|YP_448505.1|	-	2.6e-20	72.5	1.2	4.9e-20	71.6	1.1	1.5	2	0	0	2	2	2	1	AIR	carboxylase
AI-2E_transport	PF01594.16	gi|84490274|ref|YP_448506.1|	-	0.0038	16.4	0.4	0.0065	15.7	0.1	1.5	1	1	1	2	2	2	1	AI-2E	family	transporter
WSS_VP	PF12175.8	gi|84490274|ref|YP_448506.1|	-	0.0054	16.2	1.1	0.0062	16.0	1.1	1.2	1	0	0	1	1	1	1	White	spot	syndrome	virus	structural	envelope	protein	VP
Phasin	PF05597.11	gi|84490274|ref|YP_448506.1|	-	0.0093	16.0	6.6	0.011	15.7	2.2	2.4	1	1	1	2	2	2	1	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF16	PF01519.16	gi|84490274|ref|YP_448506.1|	-	0.02	15.4	12.8	0.021	15.3	2.4	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
Lipoprotein_2	PF00921.17	gi|84490274|ref|YP_448506.1|	-	0.049	13.2	4.7	0.099	12.2	4.5	1.5	1	1	0	1	1	1	0	Borrelia	lipoprotein
PIG-P	PF08510.12	gi|84490274|ref|YP_448506.1|	-	0.24	11.3	2.0	0.41	10.6	2.0	1.6	1	1	0	1	1	1	0	PIG-P
DUF948	PF06103.11	gi|84490274|ref|YP_448506.1|	-	0.26	11.6	5.5	2.5	8.4	0.5	2.5	1	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Allexi_40kDa	PF05549.11	gi|84490274|ref|YP_448506.1|	-	0.31	10.5	6.3	2.2	7.7	1.4	2.0	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
AAA_11	PF13086.6	gi|84490274|ref|YP_448506.1|	-	0.39	10.5	4.6	0.43	10.3	4.6	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4446	PF14584.6	gi|84490274|ref|YP_448506.1|	-	0.55	10.2	8.7	1.9	8.4	2.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
NPV_P10	PF05531.12	gi|84490274|ref|YP_448506.1|	-	1.6	9.3	6.8	1.1	9.8	1.6	2.7	1	1	2	3	3	3	0	Nucleopolyhedrovirus	P10	protein
YtxH	PF12732.7	gi|84490274|ref|YP_448506.1|	-	2.5	8.7	5.2	7.5	7.2	0.5	2.4	1	1	1	2	2	2	0	YtxH-like	protein
DUF4446	PF14584.6	gi|84490275|ref|YP_448507.1|	-	0.01	15.8	3.9	0.01	15.8	3.9	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF3671	PF12420.8	gi|84490275|ref|YP_448507.1|	-	0.015	15.3	2.0	0.015	15.3	2.0	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function
SID-1_RNA_chan	PF13965.6	gi|84490275|ref|YP_448507.1|	-	0.027	12.9	1.7	0.032	12.6	1.7	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
ETRAMP	PF09716.10	gi|84490275|ref|YP_448507.1|	-	0.83	9.8	6.9	0.21	11.7	1.2	2.1	2	0	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Atg14	PF10186.9	gi|84490275|ref|YP_448507.1|	-	1.6	7.7	15.7	2.1	7.4	15.7	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Peptidase_S49_N	PF08496.10	gi|84490275|ref|YP_448507.1|	-	1.7	8.7	11.5	1.8	8.6	3.2	2.1	1	1	1	2	2	2	0	Peptidase	family	S49	N-terminal
AAA_23	PF13476.6	gi|84490275|ref|YP_448507.1|	-	4.5	7.7	16.3	5.4	7.5	16.3	1.2	1	0	0	1	1	1	0	AAA	domain
Peptidase_M24	PF00557.24	gi|84490276|ref|YP_448508.1|	-	5.8e-37	127.4	0.0	4.6e-36	124.5	0.0	1.9	1	1	0	1	1	1	1	Metallopeptidase	family	M24
Sua5_yciO_yrdC	PF01300.18	gi|84490277|ref|YP_448509.1|	-	1.1e-47	161.9	0.0	2.1e-47	160.9	0.0	1.5	1	0	0	1	1	1	1	Telomere	recombination
HypF_C	PF17788.1	gi|84490277|ref|YP_448509.1|	-	2.9e-30	105.0	0.6	9.8e-30	103.3	0.6	2.0	1	0	0	1	1	1	1	HypF	Kae1-like	domain
zf-HYPF	PF07503.12	gi|84490277|ref|YP_448509.1|	-	9e-28	95.8	19.0	9.9e-14	50.8	3.4	2.5	2	0	0	2	2	2	2	HypF	finger
Acylphosphatase	PF00708.18	gi|84490277|ref|YP_448509.1|	-	2.5e-20	72.7	0.1	5.2e-20	71.6	0.1	1.6	1	0	0	1	1	1	1	Acylphosphatase
Peptidase_M22	PF00814.25	gi|84490277|ref|YP_448509.1|	-	2.3e-08	34.1	1.5	9.3e-05	22.3	0.1	2.3	2	0	0	2	2	2	2	Glycoprotease	family
Zn-ribbon_8	PF09723.10	gi|84490277|ref|YP_448509.1|	-	0.061	13.4	7.5	2.1	8.5	4.4	3.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
Fae	PF08714.11	gi|84490278|ref|YP_448510.1|	-	2e-68	229.3	0.5	3.6e-68	228.5	0.1	1.6	2	0	0	2	2	2	1	Formaldehyde-activating	enzyme	(Fae)
OMPdecase	PF00215.24	gi|84490278|ref|YP_448510.1|	-	1.8e-22	80.1	0.1	2.9e-22	79.4	0.1	1.4	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.19	gi|84490278|ref|YP_448510.1|	-	0.01	15.2	0.1	0.021	14.2	0.1	1.5	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
Pox_A3L	PF05288.11	gi|84490278|ref|YP_448510.1|	-	0.094	12.7	0.2	2.5	8.2	0.0	2.4	2	0	0	2	2	2	0	Poxvirus	A3L	Protein
DNA_binding_1	PF01035.20	gi|84490279|ref|YP_448511.1|	-	7.2e-24	83.7	0.0	1.1e-23	83.2	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
SHQ1	PF04925.15	gi|84490279|ref|YP_448511.1|	-	0.021	14.4	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	SHQ1	protein
BofA	PF07441.11	gi|84490280|ref|YP_448512.1|	-	5.4e-14	52.2	23.3	6.8e-14	51.8	23.3	1.2	1	0	0	1	1	1	1	SigmaK-factor	processing	regulatory	protein	BofA
Carb_kinase	PF01256.17	gi|84490281|ref|YP_448513.1|	-	1.1e-46	159.3	0.0	1.4e-46	159.0	0.0	1.1	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|84490281|ref|YP_448513.1|	-	2.6e-41	141.3	0.0	5.1e-41	140.4	0.0	1.5	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
Phos_pyr_kin	PF08543.12	gi|84490281|ref|YP_448513.1|	-	0.012	15.0	0.0	0.019	14.3	0.0	1.2	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
HK	PF02110.15	gi|84490281|ref|YP_448513.1|	-	0.029	13.7	0.0	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	Hydroxyethylthiazole	kinase	family
KR	PF08659.10	gi|84490281|ref|YP_448513.1|	-	0.036	14.0	0.0	0.066	13.1	0.0	1.4	1	0	0	1	1	1	0	KR	domain
GDP_Man_Dehyd	PF16363.5	gi|84490281|ref|YP_448513.1|	-	0.037	13.4	0.0	0.061	12.7	0.0	1.2	1	0	0	1	1	1	0	GDP-mannose	4,6	dehydratase
FTR_C	PF02741.15	gi|84490282|ref|YP_448514.1|	-	8.4e-65	217.3	2.0	8.4e-65	217.3	2.0	1.8	2	0	0	2	2	2	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|84490282|ref|YP_448514.1|	-	8.5e-55	184.6	0.5	5.1e-54	182.1	0.1	2.1	2	0	0	2	2	2	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
ChaB	PF06150.12	gi|84490282|ref|YP_448514.1|	-	0.1	13.2	4.0	0.84	10.3	0.0	3.1	4	0	0	4	4	4	0	ChaB
LPG_synthase_TM	PF03706.13	gi|84490283|ref|YP_448515.1|	-	4e-54	184.2	36.7	5e-54	183.9	36.7	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
mRNA_decap_C	PF16741.5	gi|84490283|ref|YP_448515.1|	-	0.081	12.2	0.7	0.22	10.9	0.7	1.7	1	0	0	1	1	1	0	mRNA-decapping	enzyme	C-terminus
Viral_Beta_CD	PF04530.12	gi|84490283|ref|YP_448515.1|	-	0.78	10.1	10.7	0.56	10.5	0.7	3.3	2	1	1	3	3	3	0	Viral	Beta	C/D	like	family
Dr_adhesin	PF12393.8	gi|84490283|ref|YP_448515.1|	-	7.5	7.0	7.4	28	5.2	0.6	3.7	2	0	0	2	2	2	0	Dr	family	adhesin
TrkA_N	PF02254.18	gi|84490284|ref|YP_448516.1|	-	6.7e-28	97.3	4.5	7.4e-28	97.1	1.6	2.1	2	0	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|84490284|ref|YP_448516.1|	-	8.1e-10	38.4	0.8	3e-09	36.6	0.1	2.2	2	1	0	2	2	2	1	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|84490284|ref|YP_448516.1|	-	2e-06	28.1	1.1	4.2e-06	27.1	0.1	2.0	2	1	0	2	2	2	1	Putative	NAD(P)-binding
Sacchrp_dh_NADP	PF03435.18	gi|84490284|ref|YP_448516.1|	-	1.1e-05	25.6	0.5	2.6e-05	24.5	0.5	1.6	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|84490284|ref|YP_448516.1|	-	2e-05	24.6	0.1	4.1e-05	23.5	0.0	1.5	1	1	1	2	2	2	1	NAD(P)H-binding
DapB_N	PF01113.20	gi|84490284|ref|YP_448516.1|	-	7e-05	23.0	2.2	0.016	15.4	0.1	2.2	2	0	0	2	2	2	2	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.24	gi|84490284|ref|YP_448516.1|	-	0.0025	18.3	0.5	0.059	13.8	0.0	2.2	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
MTS	PF05175.14	gi|84490284|ref|YP_448516.1|	-	0.043	13.4	0.1	0.092	12.3	0.1	1.4	1	0	0	1	1	1	0	Methyltransferase	small	domain
Pyr_redox	PF00070.27	gi|84490284|ref|YP_448516.1|	-	0.054	14.1	0.9	0.15	12.6	0.1	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
PglD_N	PF17836.1	gi|84490284|ref|YP_448516.1|	-	0.18	12.5	4.8	0.11	13.1	1.2	2.4	2	1	0	2	2	2	0	PglD	N-terminal	domain
Lactamase_B	PF00753.27	gi|84490285|ref|YP_448517.1|	-	4e-22	79.2	0.3	5.3e-22	78.8	0.3	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|84490285|ref|YP_448517.1|	-	0.00022	20.8	0.0	0.00032	20.3	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Acetyltransf_1	PF00583.25	gi|84490286|ref|YP_448518.1|	-	6.2e-12	45.8	0.0	8.4e-12	45.4	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|84490286|ref|YP_448518.1|	-	5.4e-10	39.5	0.0	1.2e-09	38.5	0.0	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|84490286|ref|YP_448518.1|	-	3.4e-08	33.5	0.0	5.1e-08	32.9	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|84490286|ref|YP_448518.1|	-	2.1e-06	27.6	0.0	6.5e-06	26.0	0.0	1.7	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|84490286|ref|YP_448518.1|	-	0.0065	16.6	0.0	0.013	15.6	0.0	1.5	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_15	PF17013.5	gi|84490286|ref|YP_448518.1|	-	0.0097	15.4	0.8	0.02	14.3	0.9	1.6	1	1	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_13	PF13880.6	gi|84490286|ref|YP_448518.1|	-	0.011	15.7	0.0	0.022	14.7	0.0	1.5	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Acetyltransf_9	PF13527.7	gi|84490286|ref|YP_448518.1|	-	0.068	13.3	0.0	0.13	12.3	0.0	1.6	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
PanZ	PF12568.8	gi|84490286|ref|YP_448518.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain,	PanZ
DNA_pol_B_exo1	PF03104.19	gi|84490287|ref|YP_448519.1|	-	2.6e-44	151.7	6.0	4.9e-44	150.8	6.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B	PF00136.21	gi|84490287|ref|YP_448519.1|	-	7.8e-34	117.2	0.0	1.4e-33	116.3	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo2	PF10108.9	gi|84490287|ref|YP_448519.1|	-	9.3e-13	48.3	0.1	1.7e-12	47.5	0.1	1.3	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.6	gi|84490287|ref|YP_448519.1|	-	2e-10	40.9	2.2	3.6e-10	40.1	0.4	2.4	3	1	0	3	3	3	1	RNase_H	superfamily
DNA_pol_A_exo1	PF01612.20	gi|84490287|ref|YP_448519.1|	-	0.078	12.7	0.6	0.35	10.5	0.2	2.4	1	1	1	2	2	2	0	3'-5'	exonuclease
DUF4179	PF13786.6	gi|84490288|ref|YP_448520.1|	-	0.027	14.9	0.7	0.043	14.3	0.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4179)
DUF3464	PF11947.8	gi|84490288|ref|YP_448520.1|	-	0.083	12.6	0.1	0.37	10.5	0.0	1.8	2	0	0	2	2	2	0	Photosynthesis	affected	mutant	68
Arg_repressor_C	PF02863.18	gi|84490288|ref|YP_448520.1|	-	0.11	12.4	0.3	0.21	11.5	0.3	1.4	1	0	0	1	1	1	0	Arginine	repressor,	C-terminal	domain
NTP_transferase	PF00483.23	gi|84490289|ref|YP_448521.1|	-	1.8e-27	96.5	0.0	3e-27	95.8	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
Cupin_2	PF07883.11	gi|84490289|ref|YP_448521.1|	-	5.9e-09	35.5	0.2	1.3e-08	34.5	0.2	1.5	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|84490289|ref|YP_448521.1|	-	9.5e-09	35.8	0.0	1.1e-08	35.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
MannoseP_isomer	PF01050.18	gi|84490289|ref|YP_448521.1|	-	4.7e-06	26.6	0.2	7.1e-06	26.0	0.2	1.3	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Ectoine_synth	PF06339.12	gi|84490289|ref|YP_448521.1|	-	0.0014	18.9	0.2	0.0021	18.3	0.2	1.3	1	0	0	1	1	1	1	Ectoine	synthase
Cupin_3	PF05899.12	gi|84490289|ref|YP_448521.1|	-	0.0092	15.7	0.0	0.02	14.6	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
Cupin_1	PF00190.22	gi|84490289|ref|YP_448521.1|	-	0.015	14.9	0.0	0.027	14.1	0.0	1.4	1	0	0	1	1	1	0	Cupin
Ago_PAZ	PF18309.1	gi|84490289|ref|YP_448521.1|	-	0.16	12.6	0.3	0.42	11.3	0.3	1.6	1	0	0	1	1	1	0	Argonaute	PAZ	domain
GATase	PF00117.28	gi|84490290|ref|YP_448522.1|	-	2.9e-15	56.5	0.0	3.7e-15	56.2	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|84490290|ref|YP_448522.1|	-	0.00024	21.0	0.0	0.37	10.6	0.0	2.0	2	0	0	2	2	2	2	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|84490290|ref|YP_448522.1|	-	0.015	15.1	0.0	0.058	13.1	0.0	1.9	1	1	0	1	1	1	0	Peptidase	C26
GATase_3	PF07685.14	gi|84490290|ref|YP_448522.1|	-	0.14	11.8	0.0	0.24	11.0	0.0	1.4	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
AIRS_C	PF02769.22	gi|84490291|ref|YP_448523.1|	-	2.2e-15	57.1	0.0	3.9e-15	56.3	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|84490291|ref|YP_448523.1|	-	1.1e-06	29.2	0.8	2.6e-06	28.0	0.8	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF483	PF04467.12	gi|84490291|ref|YP_448523.1|	-	0.061	13.3	0.0	1.9	8.5	0.0	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF483)
2OG-Fe_Oxy_2	PF10014.9	gi|84490292|ref|YP_448524.1|	-	0.034	13.9	0.0	0.05	13.4	0.0	1.2	1	0	0	1	1	1	0	2OG-Fe	dioxygenase
CDP-OH_P_transf	PF01066.21	gi|84490293|ref|YP_448525.1|	-	1.6e-12	48.0	1.4	1.6e-12	48.0	1.4	2.7	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
HycI	PF01750.18	gi|84490294|ref|YP_448526.1|	-	4.7e-24	84.7	0.0	5.6e-24	84.4	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
DnaJ_C	PF01556.18	gi|84490296|ref|YP_448528.1|	-	2e-41	141.5	0.0	3.1e-41	140.9	0.0	1.3	1	0	0	1	1	1	1	DnaJ	C	terminal	domain
DnaJ	PF00226.31	gi|84490296|ref|YP_448528.1|	-	1.8e-27	95.2	3.9	3.1e-27	94.5	3.9	1.4	1	0	0	1	1	1	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.19	gi|84490296|ref|YP_448528.1|	-	4.4e-14	52.6	17.5	8.3e-14	51.7	17.5	1.5	1	0	0	1	1	1	1	DnaJ	central	domain
Anti-TRAP	PF15777.5	gi|84490296|ref|YP_448528.1|	-	0.00037	20.4	19.7	0.024	14.6	4.6	3.6	2	1	3	5	5	5	4	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
TackOD1	PF18551.1	gi|84490296|ref|YP_448528.1|	-	0.028	14.1	8.4	0.85	9.3	1.8	2.3	1	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
TRAF6_Z2	PF18048.1	gi|84490296|ref|YP_448528.1|	-	0.75	9.9	11.9	2.1	8.5	1.2	3.3	3	0	0	3	3	3	0	TNF	receptor-associated	factor	6	zinc	finger	2
Mut7-C	PF01927.16	gi|84490296|ref|YP_448528.1|	-	0.84	9.7	3.2	2.6	8.2	3.2	1.8	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
zf-C4_Topoisom	PF01396.19	gi|84490296|ref|YP_448528.1|	-	1.8	8.4	13.2	14	5.6	0.2	3.5	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.19	gi|84490296|ref|YP_448528.1|	-	5.3	7.1	13.7	10	6.2	2.9	2.4	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|84490296|ref|YP_448528.1|	-	9	6.4	15.8	82	3.3	15.8	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
HSP70	PF00012.20	gi|84490297|ref|YP_448529.1|	-	1.3e-224	746.9	17.9	2.5e-203	676.6	16.2	2.1	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.13	gi|84490297|ref|YP_448529.1|	-	2.1e-18	66.2	1.6	2.1e-18	66.2	1.6	2.6	2	2	0	2	2	2	1	MreB/Mbl	protein
FGGY_C	PF02782.16	gi|84490297|ref|YP_448529.1|	-	0.0014	18.4	0.0	0.0031	17.3	0.0	1.6	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
XH	PF03469.14	gi|84490297|ref|YP_448529.1|	-	3.1	7.7	9.7	7.9	6.4	3.7	3.2	2	1	1	3	3	3	0	XH	domain
DUF3347	PF11827.8	gi|84490297|ref|YP_448529.1|	-	9.1	6.4	16.8	21	5.2	16.8	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
GrpE	PF01025.19	gi|84490298|ref|YP_448530.1|	-	4e-45	153.4	20.5	4.9e-45	153.2	20.5	1.1	1	0	0	1	1	1	1	GrpE
Exonuc_VII_L	PF02601.15	gi|84490298|ref|YP_448530.1|	-	0.33	10.5	6.9	0.44	10.1	6.9	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF3523	PF12037.8	gi|84490298|ref|YP_448530.1|	-	1.4	8.2	18.9	1.6	8.1	18.9	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3523)
HTH_5	PF01022.20	gi|84490299|ref|YP_448531.1|	-	5.4e-12	45.4	0.0	1.5e-11	44.0	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|84490299|ref|YP_448531.1|	-	5.7e-07	29.5	0.0	9e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|84490299|ref|YP_448531.1|	-	1.1e-05	25.3	0.1	0.00017	21.5	0.1	2.3	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|84490299|ref|YP_448531.1|	-	0.0004	20.2	0.0	0.00075	19.3	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|84490299|ref|YP_448531.1|	-	0.00077	19.0	0.3	0.0035	16.8	0.3	2.0	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|84490299|ref|YP_448531.1|	-	0.011	15.6	0.0	0.019	14.8	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.12	gi|84490299|ref|YP_448531.1|	-	0.012	15.5	0.1	0.03	14.3	0.1	1.8	1	0	0	1	1	1	0	HTH	domain
DsrD	PF08679.11	gi|84490299|ref|YP_448531.1|	-	0.051	13.8	0.5	0.1	12.9	0.5	1.6	1	0	0	1	1	1	0	Dissimilatory	sulfite	reductase	D	(DsrD)
Menin	PF05053.13	gi|84490300|ref|YP_448532.1|	-	1.6	7.0	13.9	2.2	6.6	13.9	1.2	1	0	0	1	1	1	0	Menin
Presenilin	PF01080.17	gi|84490300|ref|YP_448532.1|	-	2.4	6.8	9.0	3.1	6.5	9.0	1.2	1	0	0	1	1	1	0	Presenilin
Trypan_PARP	PF05887.11	gi|84490300|ref|YP_448532.1|	-	5.4	7.0	27.0	0.14	12.2	18.8	2.4	2	1	0	3	3	3	0	Procyclic	acidic	repetitive	protein	(PARP)
SPX	PF03105.19	gi|84490300|ref|YP_448532.1|	-	5.5	6.8	23.3	7.5	6.3	23.3	1.2	1	0	0	1	1	1	0	SPX	domain
DUF4551	PF15087.6	gi|84490300|ref|YP_448532.1|	-	5.7	5.6	12.1	7	5.4	12.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4551)
PHP	PF02811.19	gi|84490301|ref|YP_448533.1|	-	0.011	16.1	0.0	0.011	16.1	0.0	1.3	1	1	0	1	1	1	0	PHP	domain
PAC2	PF09754.9	gi|84490302|ref|YP_448534.1|	-	8.6e-41	140.3	0.0	1e-40	140.0	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Nop10p	PF04135.12	gi|84490303|ref|YP_448535.1|	-	2.6e-24	85.0	2.0	2.9e-24	84.9	2.0	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
PolC_DP2	PF03833.13	gi|84490303|ref|YP_448535.1|	-	0.0012	16.9	0.5	0.0012	16.9	0.5	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
RecR	PF02132.15	gi|84490303|ref|YP_448535.1|	-	0.0033	17.0	1.2	0.0039	16.7	1.2	1.2	1	0	0	1	1	1	1	RecR	protein
zf-ribbon_3	PF13248.6	gi|84490303|ref|YP_448535.1|	-	0.011	15.1	1.0	1.9	8.0	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1272	PF06906.11	gi|84490303|ref|YP_448535.1|	-	0.019	15.0	1.6	0.023	14.8	1.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
TF_Zn_Ribbon	PF08271.12	gi|84490303|ref|YP_448535.1|	-	0.03	13.8	4.0	1.8	8.1	0.5	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
NRDD	PF13597.6	gi|84490303|ref|YP_448535.1|	-	0.098	11.4	0.5	0.082	11.7	0.5	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
UPF0547	PF10571.9	gi|84490303|ref|YP_448535.1|	-	0.5	10.5	5.4	8	6.6	0.4	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Abhydrolase_1	PF00561.20	gi|84490304|ref|YP_448536.1|	-	4e-18	66.0	0.0	5.9e-18	65.4	0.0	1.3	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|84490304|ref|YP_448536.1|	-	0.00078	18.8	0.0	0.0012	18.2	0.0	1.4	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Peptidase_S9	PF00326.21	gi|84490304|ref|YP_448536.1|	-	0.032	13.7	0.0	3.4	7.1	0.0	2.3	2	0	0	2	2	2	0	Prolyl	oligopeptidase	family
Esterase	PF00756.20	gi|84490304|ref|YP_448536.1|	-	0.06	13.0	0.0	0.077	12.6	0.0	1.3	1	0	0	1	1	1	0	Putative	esterase
Abhydrolase_6	PF12697.7	gi|84490304|ref|YP_448536.1|	-	0.11	13.1	0.0	0.11	13.1	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
EIF_2_alpha	PF07541.12	gi|84490305|ref|YP_448537.1|	-	4.1e-24	84.9	0.5	8.2e-24	83.9	0.1	1.7	2	1	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|84490305|ref|YP_448537.1|	-	3.9e-09	36.7	0.1	7.6e-09	35.8	0.1	1.5	1	0	0	1	1	1	1	S1	RNA	binding	domain
DUF2007	PF09413.10	gi|84490305|ref|YP_448537.1|	-	0.062	13.5	0.1	0.21	11.7	0.0	2.0	2	0	0	2	2	2	0	Putative	prokaryotic	signal	transducing	protein
Ribosomal_S27e	PF01667.17	gi|84490306|ref|YP_448538.1|	-	8.9e-26	89.4	3.2	9.8e-26	89.2	3.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-RING_10	PF16685.5	gi|84490306|ref|YP_448538.1|	-	0.01	15.9	1.2	0.15	12.2	0.2	2.0	2	0	0	2	2	2	0	zinc	RING	finger	of	MSL2
zinc_ribbon_6	PF14599.6	gi|84490306|ref|YP_448538.1|	-	0.029	14.4	2.2	0.041	13.9	2.2	1.2	1	0	0	1	1	1	0	Zinc-ribbon
OrfB_Zn_ribbon	PF07282.11	gi|84490306|ref|YP_448538.1|	-	0.029	14.3	0.7	0.034	14.1	0.7	1.1	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.12	gi|84490306|ref|YP_448538.1|	-	0.068	12.7	1.7	0.21	11.1	1.0	1.9	1	1	1	2	2	2	0	TFIIB	zinc-binding
Desulfoferrod_N	PF06397.12	gi|84490306|ref|YP_448538.1|	-	1.7	8.3	0.1	1.7	8.3	0.1	2.7	2	1	1	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
Ribosomal_L44	PF00935.19	gi|84490307|ref|YP_448539.1|	-	1.5e-24	86.3	3.3	1.5e-24	86.3	3.3	1.4	1	1	1	2	2	2	1	Ribosomal	protein	L44
NOB1_Zn_bind	PF08772.11	gi|84490307|ref|YP_448539.1|	-	0.0011	19.1	1.7	0.012	15.7	0.2	2.1	2	0	0	2	2	2	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn-ribbon_8	PF09723.10	gi|84490307|ref|YP_448539.1|	-	0.0044	17.1	2.3	2	8.6	0.1	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
Ribosomal_L33	PF00471.20	gi|84490307|ref|YP_448539.1|	-	0.0075	16.7	2.3	0.0075	16.7	2.3	2.3	2	0	0	2	2	2	1	Ribosomal	protein	L33
Elf1	PF05129.13	gi|84490307|ref|YP_448539.1|	-	0.011	15.8	0.4	4.3	7.5	0.0	2.1	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-ribbon_3	PF13248.6	gi|84490307|ref|YP_448539.1|	-	0.013	14.9	1.8	1.7	8.1	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-UBR	PF02207.20	gi|84490307|ref|YP_448539.1|	-	0.02	15.0	0.9	2.7	8.2	0.2	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zf-LITAF-like	PF10601.9	gi|84490307|ref|YP_448539.1|	-	0.027	14.7	1.0	0.95	9.8	0.2	2.1	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
DUF1272	PF06906.11	gi|84490307|ref|YP_448539.1|	-	0.029	14.5	0.6	5.5	7.1	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
Rpr2	PF04032.16	gi|84490307|ref|YP_448539.1|	-	0.032	14.5	1.4	0.052	13.8	1.3	1.4	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Cys_rich_KTR	PF14205.6	gi|84490307|ref|YP_448539.1|	-	0.032	14.0	0.2	0.032	14.0	0.2	1.8	2	0	0	2	2	2	0	Cysteine-rich	KTR
DUF3797	PF12677.7	gi|84490307|ref|YP_448539.1|	-	0.067	13.1	0.7	5.3	7.0	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
HypA	PF01155.19	gi|84490307|ref|YP_448539.1|	-	0.077	13.0	1.6	0.6	10.2	1.6	2.0	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_2	PF13240.6	gi|84490307|ref|YP_448539.1|	-	0.078	12.7	4.0	3.3	7.5	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|84490307|ref|YP_448539.1|	-	0.14	12.2	7.3	3.9	7.5	0.1	2.3	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|84490307|ref|YP_448539.1|	-	0.2	11.2	2.0	4.6	6.8	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
Jiv90	PF14901.6	gi|84490307|ref|YP_448539.1|	-	0.31	11.2	3.8	1.5	9.0	0.1	2.1	2	0	0	2	2	2	0	Cleavage	inducing	molecular	chaperone
zf_UBZ	PF18439.1	gi|84490307|ref|YP_448539.1|	-	0.4	10.3	3.9	6.7	6.4	0.3	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zf-H2C2_2	PF13465.6	gi|84490307|ref|YP_448539.1|	-	0.42	11.1	8.4	2.2	8.9	0.3	2.7	3	0	0	3	3	2	0	Zinc-finger	double	domain
TFIIS_C	PF01096.18	gi|84490307|ref|YP_448539.1|	-	0.54	10.2	7.3	4.1	7.3	0.3	2.6	2	1	1	3	3	3	0	Transcription	factor	S-II	(TFIIS)
TBCC_N	PF16752.5	gi|84490308|ref|YP_448540.1|	-	0.078	13.4	0.6	0.25	11.8	0.1	2.1	2	0	0	2	2	2	0	Tubulin-specific	chaperone	C	N-terminal	domain
Tli4_N	PF18443.1	gi|84490308|ref|YP_448540.1|	-	0.13	12.6	0.8	0.24	11.8	0.1	1.9	2	1	0	2	2	2	0	Tle	cognate	immunity	protein	4	N-terminal	domain
PCNA_N	PF00705.18	gi|84490309|ref|YP_448541.1|	-	2.1e-21	76.0	3.8	6.8e-21	74.3	1.3	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
Rad9	PF04139.13	gi|84490309|ref|YP_448541.1|	-	7.9e-10	38.6	0.1	9.9e-10	38.3	0.1	1.2	1	0	0	1	1	1	1	Rad9
Rad1	PF02144.16	gi|84490309|ref|YP_448541.1|	-	9.2e-06	24.9	0.7	0.077	12.0	0.1	2.1	1	1	1	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Hus1	PF04005.12	gi|84490309|ref|YP_448541.1|	-	0.00024	20.3	0.0	0.00033	19.9	0.0	1.3	1	0	0	1	1	1	1	Hus1-like	protein
PCNA_C	PF02747.15	gi|84490309|ref|YP_448541.1|	-	0.00026	21.2	1.6	0.0065	16.6	0.3	3.0	2	2	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
DNA_pol3_beta_2	PF02767.16	gi|84490309|ref|YP_448541.1|	-	0.029	14.6	0.9	0.16	12.2	0.2	2.1	1	1	1	2	2	2	0	DNA	polymerase	III	beta	subunit,	central	domain
MRP-S32	PF10210.9	gi|84490309|ref|YP_448541.1|	-	0.035	14.6	0.2	10	6.8	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	28S	ribosomal	protein	S32
MazE_antitoxin	PF04014.18	gi|84490309|ref|YP_448541.1|	-	1	9.4	6.4	1	9.4	0.5	3.0	3	0	0	3	3	3	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
DUF2207	PF09972.9	gi|84490310|ref|YP_448542.1|	-	0.0003	19.7	1.4	0.00039	19.3	1.4	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF5336	PF17270.2	gi|84490310|ref|YP_448542.1|	-	0.051	13.2	0.2	0.08	12.6	0.2	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5336)
DUF202	PF02656.15	gi|84490310|ref|YP_448542.1|	-	1.2	9.6	3.2	6.7	7.2	3.7	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
Tetraspanin	PF00335.20	gi|84490310|ref|YP_448542.1|	-	1.3	8.6	4.4	2.6	7.7	4.4	1.5	1	0	0	1	1	1	0	Tetraspanin	family
DUF3040	PF11239.8	gi|84490310|ref|YP_448542.1|	-	2.2	8.6	3.4	4.4	7.7	3.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF2722	PF10846.8	gi|84490310|ref|YP_448542.1|	-	3.6	6.4	14.6	4.9	6.0	14.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2722)
TFIIS_C	PF01096.18	gi|84490311|ref|YP_448543.1|	-	1.3e-17	63.3	4.8	1.3e-17	63.3	4.8	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|84490311|ref|YP_448543.1|	-	5.7e-11	42.1	10.5	5.1e-08	32.7	1.8	3.2	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|84490311|ref|YP_448543.1|	-	2.5e-07	30.6	7.0	0.00051	20.0	0.5	2.3	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|84490311|ref|YP_448543.1|	-	7.8e-06	25.1	11.2	0.00035	19.9	1.4	2.9	3	0	0	3	3	3	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|84490311|ref|YP_448543.1|	-	0.0001	21.7	13.1	0.013	15.0	3.7	2.9	2	1	0	2	2	2	2	TFIIB	zinc-binding
DZR	PF12773.7	gi|84490311|ref|YP_448543.1|	-	0.00037	20.4	9.0	0.0095	15.9	1.1	2.7	2	1	0	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.11	gi|84490311|ref|YP_448543.1|	-	0.001	19.0	10.0	0.044	13.7	1.2	2.8	2	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
zinc-ribbons_6	PF07191.12	gi|84490311|ref|YP_448543.1|	-	0.0021	18.0	7.5	0.055	13.4	0.6	2.7	2	1	0	2	2	2	1	zinc-ribbons
Nudix_N_2	PF14803.6	gi|84490311|ref|YP_448543.1|	-	0.0047	16.8	11.5	0.089	12.7	0.3	3.5	2	2	0	2	2	2	1	Nudix	N-terminal
zinc_ribbon_4	PF13717.6	gi|84490311|ref|YP_448543.1|	-	0.0063	16.4	13.1	3.4	7.7	0.1	4.8	4	1	1	5	5	5	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|84490311|ref|YP_448543.1|	-	0.0086	15.8	18.5	0.15	11.8	5.8	3.3	3	0	0	3	3	3	2	zinc-ribbon	domain
Ribosomal_L32p	PF01783.23	gi|84490311|ref|YP_448543.1|	-	0.011	16.0	1.1	0.92	9.8	0.2	2.6	2	0	0	2	2	2	0	Ribosomal	L32p	protein	family
zf-NADH-PPase	PF09297.11	gi|84490311|ref|YP_448543.1|	-	0.011	15.3	6.8	0.26	11.0	1.7	3.2	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-C4_Topoisom	PF01396.19	gi|84490311|ref|YP_448543.1|	-	0.02	14.7	14.0	0.31	10.9	0.1	3.6	2	2	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
TerY_C	PF15616.6	gi|84490311|ref|YP_448543.1|	-	0.037	14.1	4.3	1.4	9.0	0.2	2.2	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
zf-TFIIB	PF13453.6	gi|84490311|ref|YP_448543.1|	-	0.044	13.1	0.2	0.044	13.1	0.2	2.9	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
DUF4428	PF14471.6	gi|84490311|ref|YP_448543.1|	-	0.051	13.5	4.6	0.51	10.3	0.1	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zf-CHY	PF05495.12	gi|84490311|ref|YP_448543.1|	-	0.058	13.9	3.8	0.6	10.6	3.9	2.4	1	1	0	1	1	1	0	CHY	zinc	finger
zf-DNA_Pol	PF08996.10	gi|84490311|ref|YP_448543.1|	-	0.061	13.1	0.2	0.061	13.1	0.2	1.9	1	1	1	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
zf-ACC	PF17848.1	gi|84490311|ref|YP_448543.1|	-	0.063	13.4	9.3	2	8.6	0.1	4.1	4	0	0	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf_UBZ	PF18439.1	gi|84490311|ref|YP_448543.1|	-	0.066	12.8	11.9	3.6	7.2	0.0	4.1	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
PHD_Oberon	PF07227.11	gi|84490311|ref|YP_448543.1|	-	0.069	13.0	0.6	0.069	13.0	0.6	2.6	1	1	0	2	2	2	0	PHD	-	plant	homeodomain	finger	protein
C1_1	PF00130.22	gi|84490311|ref|YP_448543.1|	-	0.093	12.6	8.2	1.5	8.8	1.2	2.3	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-AN1	PF01428.16	gi|84490311|ref|YP_448543.1|	-	0.098	12.8	8.6	3.9	7.7	1.9	3.2	3	0	0	3	3	3	0	AN1-like	Zinc	finger
DUF2387	PF09526.10	gi|84490311|ref|YP_448543.1|	-	0.1	12.8	10.3	0.38	10.9	0.9	2.6	2	1	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Auto_anti-p27	PF06677.12	gi|84490311|ref|YP_448543.1|	-	0.11	12.6	1.8	0.11	12.6	1.8	2.6	3	0	0	3	3	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-RRN7	PF11781.8	gi|84490311|ref|YP_448543.1|	-	0.16	11.7	12.7	1.2	8.8	4.9	3.7	3	1	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-LITAF-like	PF10601.9	gi|84490311|ref|YP_448543.1|	-	0.18	12.1	6.6	1.9	8.8	0.0	3.5	3	1	1	4	4	4	0	LITAF-like	zinc	ribbon	domain
zf-C2HC5	PF06221.13	gi|84490311|ref|YP_448543.1|	-	0.18	11.8	5.4	0.24	11.4	0.4	2.5	3	0	0	3	3	2	0	Putative	zinc	finger	motif,	C2HC5-type
zf-H2C2_5	PF13909.6	gi|84490311|ref|YP_448543.1|	-	0.21	11.4	0.8	0.21	11.4	0.8	2.3	3	0	0	3	3	2	0	C2H2-type	zinc-finger	domain
HypA	PF01155.19	gi|84490311|ref|YP_448543.1|	-	0.31	11.1	8.7	5.7	7.0	4.8	2.9	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_ribbon_recom	PF13408.6	gi|84490311|ref|YP_448543.1|	-	0.32	11.6	6.7	1.3	9.6	0.2	3.0	2	2	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
FYDLN_acid	PF09538.10	gi|84490311|ref|YP_448543.1|	-	0.37	11.5	4.1	14	6.4	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(FYDLN_acid)
zf-ZPR1	PF03367.13	gi|84490311|ref|YP_448543.1|	-	0.46	10.3	3.9	3.8	7.3	0.1	2.5	3	0	0	3	3	2	0	ZPR1	zinc-finger	domain
Nop10p	PF04135.12	gi|84490311|ref|YP_448543.1|	-	0.47	10.5	5.5	2.5	8.2	0.0	3.2	4	0	0	4	4	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-IS66	PF13005.7	gi|84490311|ref|YP_448543.1|	-	0.48	10.9	8.8	26	5.3	0.1	3.8	4	0	0	4	4	3	0	zinc-finger	binding	domain	of	transposase	IS66
DUF35_N	PF12172.8	gi|84490311|ref|YP_448543.1|	-	0.5	10.3	11.1	0.65	9.9	0.1	3.7	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Lar_restr_allev	PF14354.6	gi|84490311|ref|YP_448543.1|	-	0.5	10.8	10.3	0.9	10.0	4.0	2.9	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.10	gi|84490311|ref|YP_448543.1|	-	0.54	10.4	15.9	18	5.5	0.1	4.4	3	1	0	3	3	3	0	Zinc	ribbon	domain
Prok-RING_1	PF14446.6	gi|84490311|ref|YP_448543.1|	-	0.55	10.2	9.9	1.3	9.0	1.4	2.8	3	0	0	3	3	2	0	Prokaryotic	RING	finger	family	1
TackOD1	PF18551.1	gi|84490311|ref|YP_448543.1|	-	0.63	9.7	6.8	2.2	7.9	0.3	2.6	2	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
zf-H2C2_2	PF13465.6	gi|84490311|ref|YP_448543.1|	-	0.67	10.5	15.3	7.8	7.1	0.2	4.2	4	0	0	4	4	4	0	Zinc-finger	double	domain
Ogr_Delta	PF04606.12	gi|84490311|ref|YP_448543.1|	-	0.71	9.9	8.7	0.28	11.2	0.4	2.6	3	0	0	3	3	2	0	Ogr/Delta-like	zinc	finger
Elf1	PF05129.13	gi|84490311|ref|YP_448543.1|	-	0.71	10.0	8.6	0.34	11.0	0.6	3.1	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
PhnA_Zn_Ribbon	PF08274.12	gi|84490311|ref|YP_448543.1|	-	0.85	9.6	9.1	18	5.4	0.1	3.9	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
Ribosomal_L37e	PF01907.19	gi|84490311|ref|YP_448543.1|	-	0.87	9.8	8.8	0.28	11.4	0.4	2.9	2	1	0	2	2	2	0	Ribosomal	protein	L37e
DNA_ligase_ZBD	PF03119.16	gi|84490311|ref|YP_448543.1|	-	1.1	9.3	6.9	7.3	6.7	0.1	3.0	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
UPF0547	PF10571.9	gi|84490311|ref|YP_448543.1|	-	1.1	9.3	15.5	1.9	8.6	0.4	4.1	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
C1_2	PF03107.16	gi|84490311|ref|YP_448543.1|	-	2.5	8.5	13.8	0.93	9.9	0.3	3.0	2	2	0	2	2	2	0	C1	domain
Tnp_zf-ribbon_2	PF13842.6	gi|84490311|ref|YP_448543.1|	-	2.6	8.9	10.2	24	5.8	0.1	3.7	3	1	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
Rubredoxin_2	PF18073.1	gi|84490311|ref|YP_448543.1|	-	3	7.6	17.4	3.8	7.3	0.4	4.1	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
zinc_ribbon_15	PF17032.5	gi|84490311|ref|YP_448543.1|	-	4.1	8.2	12.0	11	6.8	5.1	3.0	2	1	0	2	2	2	0	zinc-ribbon	family
zf-Mss51	PF13824.6	gi|84490311|ref|YP_448543.1|	-	5.7	7.1	11.6	1.4	9.0	1.9	3.0	2	2	1	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF1936	PF09151.10	gi|84490311|ref|YP_448543.1|	-	5.9	6.9	19.2	1.1	9.3	0.2	4.1	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
A2L_zn_ribbon	PF08792.10	gi|84490311|ref|YP_448543.1|	-	8.2	6.3	12.7	7.8	6.3	0.7	3.8	3	1	1	4	4	4	0	A2L	zinc	ribbon	domain
NUDIX	PF00293.28	gi|84490312|ref|YP_448544.1|	-	3.7e-19	69.1	0.0	4.3e-19	68.9	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
DUF4916	PF16262.5	gi|84490312|ref|YP_448544.1|	-	0.0018	17.8	0.0	0.07	12.6	0.0	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4916)
RNA_pol_L_2	PF13656.6	gi|84490313|ref|YP_448545.1|	-	1.1e-16	60.4	0.0	1.3e-16	60.1	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.24	gi|84490313|ref|YP_448545.1|	-	0.017	14.6	0.0	0.06	12.8	0.0	1.9	1	1	0	1	1	1	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
ECR1_N	PF14382.6	gi|84490314|ref|YP_448546.1|	-	3.2e-10	39.6	0.4	7.3e-10	38.5	0.1	1.8	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.23	gi|84490314|ref|YP_448546.1|	-	0.00033	20.9	2.4	0.1	12.9	0.0	2.6	2	1	0	2	2	2	2	S1	RNA	binding	domain
EXOSC1	PF10447.9	gi|84490314|ref|YP_448546.1|	-	0.0014	19.2	1.1	1.2	9.8	0.3	2.4	1	1	1	2	2	2	2	Exosome	component	EXOSC1/CSL4
Diphthamide_syn	PF01866.17	gi|84490315|ref|YP_448547.1|	-	3e-82	276.4	0.0	4.6e-82	275.9	0.0	1.2	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Pribosyltran	PF00156.27	gi|84490316|ref|YP_448548.1|	-	6.1e-19	68.1	0.1	8.4e-19	67.6	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.6	gi|84490316|ref|YP_448548.1|	-	0.0035	16.9	0.1	0.0047	16.5	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase
UPRTase	PF14681.6	gi|84490316|ref|YP_448548.1|	-	0.019	14.4	0.0	0.025	14.0	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
SRP54	PF00448.22	gi|84490317|ref|YP_448549.1|	-	2.8e-73	245.8	1.4	2.9e-73	245.7	0.1	1.7	2	0	0	2	2	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|84490317|ref|YP_448549.1|	-	8.8e-27	93.6	1.0	8.8e-27	93.6	1.0	3.3	4	0	0	4	4	3	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|84490317|ref|YP_448549.1|	-	2.3e-17	63.0	2.0	2.3e-17	63.0	2.0	3.0	3	0	0	3	3	2	1	SRP54-type	protein,	helical	bundle	domain
AAA_33	PF13671.6	gi|84490317|ref|YP_448549.1|	-	1.2e-05	25.5	0.0	2.8e-05	24.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|84490317|ref|YP_448549.1|	-	0.00012	22.2	0.5	0.00054	20.0	0.2	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
CbiA	PF01656.23	gi|84490317|ref|YP_448549.1|	-	0.00012	22.1	0.0	0.00035	20.6	0.0	1.8	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.6	gi|84490317|ref|YP_448549.1|	-	0.00053	20.4	0.1	0.0013	19.1	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
cobW	PF02492.19	gi|84490317|ref|YP_448549.1|	-	0.00083	19.0	4.5	0.053	13.1	4.5	2.5	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
G-alpha	PF00503.20	gi|84490317|ref|YP_448549.1|	-	0.00087	18.5	0.0	0.002	17.3	0.0	1.5	1	1	0	1	1	1	1	G-protein	alpha	subunit
AAA_17	PF13207.6	gi|84490317|ref|YP_448549.1|	-	0.0011	19.4	1.1	0.0011	19.4	1.1	3.9	4	1	0	4	4	3	1	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|84490317|ref|YP_448549.1|	-	0.0013	17.7	0.0	0.0027	16.7	0.0	1.5	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MeaB	PF03308.16	gi|84490317|ref|YP_448549.1|	-	0.0015	17.5	0.1	0.029	13.4	0.0	2.3	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_19	PF13245.6	gi|84490317|ref|YP_448549.1|	-	0.0016	18.8	0.1	0.0044	17.4	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
ATP_bind_1	PF03029.17	gi|84490317|ref|YP_448549.1|	-	0.0019	18.0	0.5	0.019	14.8	0.0	2.7	3	0	0	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
GTP_EFTU	PF00009.27	gi|84490317|ref|YP_448549.1|	-	0.0021	17.7	1.5	0.0032	17.1	0.5	2.1	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Zeta_toxin	PF06414.12	gi|84490317|ref|YP_448549.1|	-	0.0027	17.0	0.0	0.0054	16.0	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_24	PF13479.6	gi|84490317|ref|YP_448549.1|	-	0.0049	16.6	0.0	0.0091	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
SRPRB	PF09439.10	gi|84490317|ref|YP_448549.1|	-	0.0051	16.3	3.5	0.45	9.9	0.0	2.8	3	0	0	3	3	3	1	Signal	recognition	particle	receptor	beta	subunit
Arf	PF00025.21	gi|84490317|ref|YP_448549.1|	-	0.0055	16.2	1.1	0.011	15.2	0.1	2.0	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
ResIII	PF04851.15	gi|84490317|ref|YP_448549.1|	-	0.0066	16.5	2.0	0.015	15.3	1.1	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
6PF2K	PF01591.18	gi|84490317|ref|YP_448549.1|	-	0.007	15.7	0.0	0.013	14.8	0.0	1.4	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
Thymidylate_kin	PF02223.17	gi|84490317|ref|YP_448549.1|	-	0.0085	15.8	0.6	0.028	14.1	0.6	1.8	1	0	0	1	1	1	1	Thymidylate	kinase
MipZ	PF09140.11	gi|84490317|ref|YP_448549.1|	-	0.009	15.3	1.1	0.73	9.1	1.1	2.5	1	1	0	1	1	1	1	ATPase	MipZ
AAA_18	PF13238.6	gi|84490317|ref|YP_448549.1|	-	0.011	16.3	0.1	0.036	14.6	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|84490317|ref|YP_448549.1|	-	0.012	15.9	0.0	0.035	14.4	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_32	PF13654.6	gi|84490317|ref|YP_448549.1|	-	0.013	14.3	0.0	0.029	13.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_31	PF13614.6	gi|84490317|ref|YP_448549.1|	-	0.014	15.4	0.8	8.4	6.3	0.1	3.4	3	0	0	3	3	3	0	AAA	domain
APS_kinase	PF01583.20	gi|84490317|ref|YP_448549.1|	-	0.015	15.2	0.0	0.032	14.1	0.0	1.6	1	0	0	1	1	1	0	Adenylylsulphate	kinase
MobB	PF03205.14	gi|84490317|ref|YP_448549.1|	-	0.015	15.2	0.6	0.043	13.7	0.6	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Peptidase_U57	PF05582.12	gi|84490317|ref|YP_448549.1|	-	0.017	14.4	0.1	0.03	13.6	0.1	1.4	1	0	0	1	1	1	0	YabG	peptidase	U57
Glyco_transf_4	PF13439.6	gi|84490317|ref|YP_448549.1|	-	0.018	15.1	0.0	0.059	13.4	0.0	1.8	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
PduV-EutP	PF10662.9	gi|84490317|ref|YP_448549.1|	-	0.022	14.5	0.1	0.45	10.2	0.1	2.6	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_7	PF12775.7	gi|84490317|ref|YP_448549.1|	-	0.045	13.3	0.0	0.085	12.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
KTI12	PF08433.10	gi|84490317|ref|YP_448549.1|	-	0.047	13.1	0.0	0.12	11.8	0.0	1.7	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
TPP_enzyme_M	PF00205.22	gi|84490317|ref|YP_448549.1|	-	0.055	13.2	0.0	0.21	11.3	0.0	1.9	1	1	1	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
DUF1611	PF07755.11	gi|84490317|ref|YP_448549.1|	-	0.056	12.7	0.1	0.13	11.5	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
AAA_30	PF13604.6	gi|84490317|ref|YP_448549.1|	-	0.061	13.0	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Methyltransf_24	PF13578.6	gi|84490317|ref|YP_448549.1|	-	0.078	14.0	0.0	0.36	11.9	0.0	2.1	2	1	0	2	2	1	0	Methyltransferase	domain
LpxK	PF02606.14	gi|84490317|ref|YP_448549.1|	-	0.078	12.1	0.1	0.14	11.3	0.1	1.3	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
Pox_A32	PF04665.12	gi|84490317|ref|YP_448549.1|	-	0.13	11.7	0.5	0.31	10.5	0.0	1.8	2	0	0	2	2	1	0	Poxvirus	A32	protein
NTPase_1	PF03266.15	gi|84490317|ref|YP_448549.1|	-	0.15	12.0	2.7	0.37	10.7	0.2	2.5	3	0	0	3	3	2	0	NTPase
AAA_28	PF13521.6	gi|84490317|ref|YP_448549.1|	-	0.17	12.1	0.0	0.31	11.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SWI2_SNF2	PF18766.1	gi|84490317|ref|YP_448549.1|	-	0.18	11.5	1.2	0.65	9.6	0.1	2.2	2	0	0	2	2	2	0	SWI2/SNF2	ATPase
RNA_helicase	PF00910.22	gi|84490317|ref|YP_448549.1|	-	0.25	11.8	3.7	0.54	10.7	0.4	2.9	3	1	0	3	3	1	0	RNA	helicase
DUF1759	PF03564.15	gi|84490317|ref|YP_448549.1|	-	0.28	11.1	1.1	5.9	6.8	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1759)
Glyco_trans_1_2	PF13524.6	gi|84490318|ref|YP_448550.1|	-	3.2e-24	85.1	0.0	3.8e-14	52.9	0.0	3.0	3	0	0	3	3	3	2	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.26	gi|84490318|ref|YP_448550.1|	-	1.3e-10	41.4	0.1	3.6e-10	39.9	0.1	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_1_4	PF13692.6	gi|84490318|ref|YP_448550.1|	-	2.9e-05	24.5	0.0	0.014	15.8	0.0	2.6	2	0	0	2	2	2	2	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|84490318|ref|YP_448550.1|	-	0.00055	19.5	0.0	0.48	9.9	0.0	3.3	2	0	0	2	2	2	2	Glycosyl	transferases	group	1
Anemone_cytotox	PF06369.12	gi|84490318|ref|YP_448550.1|	-	0.16	11.6	5.2	0.11	12.1	0.3	3.0	3	0	0	3	3	3	0	Sea	anemone	cytotoxic	protein
THUMP	PF02926.17	gi|84490319|ref|YP_448551.1|	-	4.4e-05	23.6	0.8	4.4e-05	23.6	0.8	2.3	2	1	1	3	3	3	1	THUMP	domain
DUF2703	PF10865.8	gi|84490319|ref|YP_448551.1|	-	0.01	16.0	0.6	0.037	14.2	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2703)
DUF4107	PF13389.6	gi|84490319|ref|YP_448551.1|	-	0.097	12.8	0.4	0.18	12.0	0.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4107)
Luciferase_N	PF05295.11	gi|84490319|ref|YP_448551.1|	-	0.15	12.1	0.6	0.48	10.5	0.1	2.0	3	0	0	3	3	3	0	Luciferase/LBP	N-terminal	domain
Ribosomal_L21e	PF01157.18	gi|84490320|ref|YP_448552.1|	-	1e-33	115.2	2.8	1.1e-33	115.1	2.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
RNA_pol_Rpb4	PF03874.16	gi|84490321|ref|YP_448553.1|	-	9.8e-14	51.7	2.2	1.2e-13	51.5	2.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
RrnaAD	PF00398.20	gi|84490322|ref|YP_448554.1|	-	3.2e-50	170.6	4.9	4e-50	170.4	4.9	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Met_10	PF02475.16	gi|84490322|ref|YP_448554.1|	-	3.2e-10	40.1	0.2	5.6e-10	39.3	0.2	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_25	PF13649.6	gi|84490322|ref|YP_448554.1|	-	4.5e-09	36.9	0.0	1.4e-08	35.3	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|84490322|ref|YP_448554.1|	-	2.7e-08	33.5	0.0	5.4e-08	32.5	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
MTS	PF05175.14	gi|84490322|ref|YP_448554.1|	-	2e-07	30.7	0.1	4.3e-07	29.6	0.1	1.5	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|84490322|ref|YP_448554.1|	-	4.4e-06	26.6	0.1	1.3e-05	25.0	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|84490322|ref|YP_448554.1|	-	9.9e-06	26.1	0.0	2e-05	25.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|84490322|ref|YP_448554.1|	-	0.00021	21.1	0.2	0.00056	19.7	0.0	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PRMT5	PF05185.16	gi|84490322|ref|YP_448554.1|	-	0.00024	21.0	2.3	0.00041	20.2	0.8	2.0	2	0	0	2	2	2	1	PRMT5	arginine-N-methyltransferase
Cons_hypoth95	PF03602.15	gi|84490322|ref|YP_448554.1|	-	0.00047	19.9	0.5	0.0013	18.4	0.0	1.8	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltr_RsmB-F	PF01189.17	gi|84490322|ref|YP_448554.1|	-	0.00085	19.0	0.4	0.0091	15.6	0.1	2.1	2	0	0	2	2	2	1	16S	rRNA	methyltransferase	RsmB/F
tRNA_U5-meth_tr	PF05958.11	gi|84490322|ref|YP_448554.1|	-	0.001	18.1	0.3	0.0018	17.3	0.3	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
PrmA	PF06325.13	gi|84490322|ref|YP_448554.1|	-	0.0012	18.3	1.5	0.0018	17.7	0.2	1.7	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_23	PF13489.6	gi|84490322|ref|YP_448554.1|	-	0.0022	17.8	0.0	0.0033	17.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|84490322|ref|YP_448554.1|	-	0.0025	18.5	0.0	0.0068	17.1	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|84490322|ref|YP_448554.1|	-	0.0028	17.0	0.0	0.0046	16.3	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
GidB	PF02527.15	gi|84490322|ref|YP_448554.1|	-	0.0064	15.8	0.4	0.01	15.1	0.4	1.3	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
DNA_methylase	PF00145.17	gi|84490322|ref|YP_448554.1|	-	0.0082	15.5	0.8	0.036	13.4	0.0	2.0	2	0	0	2	2	2	1	C-5	cytosine-specific	DNA	methylase
DREV	PF05219.12	gi|84490322|ref|YP_448554.1|	-	0.01	15.0	0.2	0.027	13.6	0.1	1.7	2	0	0	2	2	2	0	DREV	methyltransferase
DOT1	PF08123.13	gi|84490322|ref|YP_448554.1|	-	0.025	14.1	0.5	0.33	10.5	0.0	2.1	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
AAA_27	PF13514.6	gi|84490322|ref|YP_448554.1|	-	0.092	12.3	0.1	0.17	11.4	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
MTS	PF05175.14	gi|84490323|ref|YP_448555.1|	-	5.5e-20	71.6	0.1	1.4e-15	57.3	0.1	2.0	2	0	0	2	2	2	2	Methyltransferase	small	domain
PrmA	PF06325.13	gi|84490323|ref|YP_448555.1|	-	4e-15	56.0	1.9	6.5e-15	55.3	1.0	1.7	1	1	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|84490323|ref|YP_448555.1|	-	3.3e-12	46.5	0.3	4.7e-12	45.9	0.3	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|84490323|ref|YP_448555.1|	-	2.8e-09	37.0	1.2	3.6e-09	36.7	0.9	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_25	PF13649.6	gi|84490323|ref|YP_448555.1|	-	3.6e-09	37.2	0.0	1.7e-08	35.1	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_16	PF10294.9	gi|84490323|ref|YP_448555.1|	-	5.1e-07	29.6	0.3	1e-06	28.6	0.3	1.4	1	0	0	1	1	1	1	Lysine	methyltransferase
Methyltransf_18	PF12847.7	gi|84490323|ref|YP_448555.1|	-	1.4e-06	28.3	0.5	8.2e-05	22.6	0.3	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
TehB	PF03848.14	gi|84490323|ref|YP_448555.1|	-	1.4e-06	27.8	1.3	1.8e-06	27.5	0.3	1.6	2	0	0	2	2	2	1	Tellurite	resistance	protein	TehB
Methyltransf_12	PF08242.12	gi|84490323|ref|YP_448555.1|	-	1.7e-06	28.7	0.0	5.1e-06	27.2	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|84490323|ref|YP_448555.1|	-	1.8e-06	28.5	0.0	5.1e-06	27.0	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|84490323|ref|YP_448555.1|	-	1.8e-06	27.9	0.0	2.8e-06	27.3	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
NodS	PF05401.11	gi|84490323|ref|YP_448555.1|	-	1.9e-06	27.6	0.0	2.9e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
CMAS	PF02353.20	gi|84490323|ref|YP_448555.1|	-	1.3e-05	24.7	0.0	3.7e-05	23.2	0.0	1.7	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.10	gi|84490323|ref|YP_448555.1|	-	2.6e-05	23.8	0.3	3.1e-05	23.6	0.3	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.15	gi|84490323|ref|YP_448555.1|	-	0.00012	21.8	0.0	0.00021	21.0	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
tRNA_U5-meth_tr	PF05958.11	gi|84490323|ref|YP_448555.1|	-	0.00012	21.2	0.9	0.00021	20.4	0.9	1.3	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
PCMT	PF01135.19	gi|84490323|ref|YP_448555.1|	-	0.00025	20.8	0.0	0.00042	20.1	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TRM	PF02005.16	gi|84490323|ref|YP_448555.1|	-	0.00038	19.7	0.2	0.0012	18.1	0.1	1.8	2	0	0	2	2	2	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
RrnaAD	PF00398.20	gi|84490323|ref|YP_448555.1|	-	0.00055	19.1	0.0	0.00091	18.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
rRNA_methylase	PF06962.12	gi|84490323|ref|YP_448555.1|	-	0.00062	19.7	0.0	0.0017	18.3	0.0	1.7	2	0	0	2	2	2	1	Putative	rRNA	methylase
Ubie_methyltran	PF01209.18	gi|84490323|ref|YP_448555.1|	-	0.00074	18.9	0.1	0.0017	17.8	0.1	1.5	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MethyltransfD12	PF02086.15	gi|84490323|ref|YP_448555.1|	-	0.0012	18.5	0.2	0.0012	18.5	0.2	1.5	2	0	0	2	2	2	1	D12	class	N6	adenine-specific	DNA	methyltransferase
UPF0020	PF01170.18	gi|84490323|ref|YP_448555.1|	-	0.0015	18.2	0.1	0.0037	17.0	0.1	1.7	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
AAA_31	PF13614.6	gi|84490323|ref|YP_448555.1|	-	0.0025	17.8	0.3	0.0041	17.0	0.3	1.3	1	0	0	1	1	1	1	AAA	domain
Methyltransf_4	PF02390.17	gi|84490323|ref|YP_448555.1|	-	0.0038	16.7	0.6	0.018	14.5	0.3	1.9	2	0	0	2	2	2	1	Putative	methyltransferase
Methyltransf_24	PF13578.6	gi|84490323|ref|YP_448555.1|	-	0.032	15.2	0.0	0.12	13.5	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
ANAPC4_WD40	PF12894.7	gi|84490323|ref|YP_448555.1|	-	0.077	13.3	0.1	0.17	12.2	0.0	1.6	2	0	0	2	2	1	0	Anaphase-promoting	complex	subunit	4	WD40	domain
Methyltransf_2	PF00891.18	gi|84490323|ref|YP_448555.1|	-	0.094	12.0	0.0	0.41	9.9	0.0	1.8	2	0	0	2	2	2	0	O-methyltransferase	domain
MetW	PF07021.12	gi|84490323|ref|YP_448555.1|	-	0.1	12.2	0.1	0.16	11.6	0.1	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
DUF3419	PF11899.8	gi|84490323|ref|YP_448555.1|	-	0.11	11.6	0.5	0.23	10.6	0.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3419)
EbsA	PF17255.2	gi|84490324|ref|YP_448556.1|	-	0.027	14.8	1.2	0.049	14.0	1.2	1.4	1	0	0	1	1	1	0	EbsA-like	protein
DUF948	PF06103.11	gi|84490324|ref|YP_448556.1|	-	0.29	11.4	2.8	2.4	8.5	0.4	2.8	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF5082	PF16888.5	gi|84490324|ref|YP_448556.1|	-	3.4	8.0	16.4	5.1	7.4	4.8	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF5082)
CheF-arch	PF04283.12	gi|84490325|ref|YP_448557.1|	-	0.0022	17.8	0.1	0.0034	17.2	0.1	1.3	1	0	0	1	1	1	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
Vps36_ESCRT-II	PF11605.8	gi|84490325|ref|YP_448557.1|	-	0.0039	17.3	0.6	0.037	14.2	0.2	2.2	2	0	0	2	2	2	1	Vacuolar	protein	sorting	protein	36	Vps36
zinc_ribbon_2	PF13240.6	gi|84490326|ref|YP_448558.1|	-	4e-06	26.3	5.7	4e-06	26.3	5.7	3.3	4	0	0	4	4	3	2	zinc-ribbon	domain
DZR	PF12773.7	gi|84490326|ref|YP_448558.1|	-	1.4e-05	25.0	6.4	0.00017	21.5	6.5	2.2	1	1	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|84490326|ref|YP_448558.1|	-	0.00024	21.0	1.1	0.46	10.5	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbons
Nudix_N_2	PF14803.6	gi|84490326|ref|YP_448558.1|	-	0.0021	18.0	5.3	0.92	9.5	0.1	3.2	3	0	0	3	3	3	1	Nudix	N-terminal
TF_Zn_Ribbon	PF08271.12	gi|84490326|ref|YP_448558.1|	-	0.0025	17.3	6.6	0.079	12.5	3.6	3.0	2	1	0	2	2	2	1	TFIIB	zinc-binding
PhnA_Zn_Ribbon	PF08274.12	gi|84490326|ref|YP_448558.1|	-	0.0031	17.4	7.8	0.054	13.5	0.2	2.9	3	0	0	3	3	3	2	PhnA	Zinc-Ribbon
zf-ISL3	PF14690.6	gi|84490326|ref|YP_448558.1|	-	0.004	17.8	3.4	4	8.2	0.0	3.1	2	1	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
GFA	PF04828.14	gi|84490326|ref|YP_448558.1|	-	0.0046	17.3	6.3	0.15	12.4	0.1	2.9	1	1	2	3	3	3	1	Glutathione-dependent	formaldehyde-activating	enzyme
zinc_ribbon_16	PF17034.5	gi|84490326|ref|YP_448558.1|	-	0.0063	16.7	2.6	0.023	14.9	0.1	2.1	1	1	1	2	2	2	1	Zinc-ribbon	like	family
UPF0547	PF10571.9	gi|84490326|ref|YP_448558.1|	-	0.0063	16.6	9.1	0.089	12.9	4.2	2.7	2	1	0	2	2	2	1	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.10	gi|84490326|ref|YP_448558.1|	-	0.01	15.9	4.7	4.5	7.5	0.3	3.1	2	1	1	3	3	3	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|84490326|ref|YP_448558.1|	-	0.011	15.1	11.3	1.4	8.5	0.2	3.0	2	1	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|84490326|ref|YP_448558.1|	-	0.022	14.8	6.4	0.52	10.3	0.1	2.8	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
TackOD1	PF18551.1	gi|84490326|ref|YP_448558.1|	-	0.022	14.5	7.8	0.27	10.9	2.9	2.2	1	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
HypA	PF01155.19	gi|84490326|ref|YP_448558.1|	-	0.026	14.5	2.0	0.13	12.3	0.1	2.1	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_15	PF17032.5	gi|84490326|ref|YP_448558.1|	-	0.039	14.7	9.0	0.24	12.2	3.7	2.2	2	0	0	2	2	2	0	zinc-ribbon	family
RPA_interact_C	PF14768.6	gi|84490326|ref|YP_448558.1|	-	0.078	13.6	2.8	1	10.0	3.1	2.0	1	1	1	2	2	2	0	Replication	protein	A	interacting	C-terminal
Ogr_Delta	PF04606.12	gi|84490326|ref|YP_448558.1|	-	0.082	12.9	5.8	4.5	7.3	0.1	3.1	2	1	1	3	3	3	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_9	PF14369.6	gi|84490326|ref|YP_448558.1|	-	0.11	12.8	11.9	0.55	10.5	0.5	3.1	2	1	1	3	3	3	0	zinc-ribbon
A2L_zn_ribbon	PF08792.10	gi|84490326|ref|YP_448558.1|	-	0.11	12.2	9.0	2.7	7.8	0.3	3.3	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|84490326|ref|YP_448558.1|	-	0.11	12.5	5.2	20	5.3	4.8	2.6	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
RNA_POL_M_15KD	PF02150.16	gi|84490326|ref|YP_448558.1|	-	0.13	12.2	11.5	0.28	11.1	6.5	3.1	2	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Zn_ribbon_SprT	PF17283.2	gi|84490326|ref|YP_448558.1|	-	0.14	12.1	2.8	21	5.1	0.0	3.1	3	0	0	3	3	3	0	SprT-like	zinc	ribbon	domain
Auto_anti-p27	PF06677.12	gi|84490326|ref|YP_448558.1|	-	0.14	12.3	4.9	0.57	10.4	1.2	2.2	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF35_N	PF12172.8	gi|84490326|ref|YP_448558.1|	-	0.16	11.9	5.5	5.9	6.9	0.1	2.8	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF1272	PF06906.11	gi|84490326|ref|YP_448558.1|	-	0.2	11.7	3.9	2.8	8.1	1.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
DUF2321	PF10083.9	gi|84490326|ref|YP_448558.1|	-	0.53	9.9	8.3	1.4	8.5	0.9	2.8	1	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-TFIIB	PF13453.6	gi|84490326|ref|YP_448558.1|	-	0.7	9.3	4.3	2.9	7.3	0.0	2.6	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
DCR	PF14047.6	gi|84490326|ref|YP_448558.1|	-	0.81	9.9	0.2	0.81	9.9	0.2	2.4	3	0	0	3	3	3	0	Dppa2/4	conserved	region
TFIIS_C	PF01096.18	gi|84490326|ref|YP_448558.1|	-	2.1	8.3	6.9	20	5.1	0.2	3.1	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
DpnI	PF06044.12	gi|84490326|ref|YP_448558.1|	-	2.6	7.6	11.6	1.7	8.3	0.8	2.8	1	1	2	3	3	3	0	Dam-replacing	family
DiS_P_DiS	PF06750.13	gi|84490326|ref|YP_448558.1|	-	2.9	8.1	4.9	15	5.8	4.9	2.2	1	1	0	1	1	1	0	Bacterial	Peptidase	A24	N-terminal	domain
YhfH	PF14149.6	gi|84490326|ref|YP_448558.1|	-	3.1	7.9	9.0	12	5.9	0.3	3.0	2	1	1	3	3	3	0	YhfH-like	protein
zinc_ribbon_4	PF13717.6	gi|84490326|ref|YP_448558.1|	-	4	7.4	8.5	27	4.8	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|84490326|ref|YP_448558.1|	-	5	6.9	8.7	30	4.4	0.1	3.2	3	0	0	3	3	3	0	Rubredoxin	metal	binding	domain
zf-IS66	PF13005.7	gi|84490326|ref|YP_448558.1|	-	5.2	7.5	6.9	32	5.0	1.6	2.7	2	1	1	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-LITAF-like	PF10601.9	gi|84490326|ref|YP_448558.1|	-	5.7	7.3	8.7	3.6	7.9	0.2	2.8	2	1	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|84490326|ref|YP_448558.1|	-	7.6	6.8	12.2	2.7	8.2	0.4	3.0	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Fer4_12	PF13353.6	gi|84490327|ref|YP_448559.1|	-	3.5e-29	101.8	0.1	4.9e-29	101.4	0.1	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|84490327|ref|YP_448559.1|	-	2.1e-14	53.7	0.1	3.9e-14	52.8	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|84490327|ref|YP_448559.1|	-	5.9e-07	30.0	0.0	1.1e-06	29.2	0.0	1.4	2	0	0	2	2	2	1	Radical	SAM	superfamily
AAA	PF00004.29	gi|84490328|ref|YP_448560.1|	-	1.6e-31	109.4	0.0	2.4e-29	102.4	0.0	2.7	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|84490328|ref|YP_448560.1|	-	0.00068	19.6	0.3	0.011	15.7	0.1	3.0	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|84490328|ref|YP_448560.1|	-	0.0026	18.2	0.0	0.06	13.7	0.0	2.8	3	0	0	3	3	3	1	AAA	ATPase	domain
ATPase	PF06745.13	gi|84490328|ref|YP_448560.1|	-	0.0034	16.7	0.0	0.011	15.1	0.0	1.8	1	0	0	1	1	1	1	KaiC
Viral_helicase1	PF01443.18	gi|84490328|ref|YP_448560.1|	-	0.021	14.6	0.0	0.046	13.5	0.0	1.6	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_18	PF13238.6	gi|84490328|ref|YP_448560.1|	-	0.025	15.1	0.0	0.078	13.5	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
AAA_lid_3	PF17862.1	gi|84490328|ref|YP_448560.1|	-	0.026	14.3	0.0	0.081	12.7	0.0	1.9	1	0	0	1	1	1	0	AAA+	lid	domain
RNA_helicase	PF00910.22	gi|84490328|ref|YP_448560.1|	-	0.03	14.7	0.0	0.12	12.8	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
NACHT	PF05729.12	gi|84490328|ref|YP_448560.1|	-	0.045	13.7	0.0	0.12	12.3	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
Mg_chelatase	PF01078.21	gi|84490328|ref|YP_448560.1|	-	0.056	12.8	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.14	gi|84490328|ref|YP_448560.1|	-	0.088	12.9	0.0	0.23	11.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
Zeta_toxin	PF06414.12	gi|84490328|ref|YP_448560.1|	-	0.095	12.0	0.0	0.2	10.9	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activ_2	PF14532.6	gi|84490328|ref|YP_448560.1|	-	0.12	12.4	0.0	1.7	8.8	0.0	2.4	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_17	PF13207.6	gi|84490328|ref|YP_448560.1|	-	0.14	12.6	0.0	4.4	7.7	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
AAA_22	PF13401.6	gi|84490328|ref|YP_448560.1|	-	0.18	12.0	0.0	2.7	8.3	0.0	2.7	1	1	0	1	1	1	0	AAA	domain
DUF2997	PF11211.8	gi|84490330|ref|YP_448562.1|	-	4.3e-18	64.8	1.5	5.2e-18	64.6	1.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2997)
IFN-gamma	PF00714.17	gi|84490330|ref|YP_448562.1|	-	0.017	15.0	0.4	0.017	15.0	0.4	1.1	1	0	0	1	1	1	0	Interferon	gamma
HHH_3	PF12836.7	gi|84490331|ref|YP_448563.1|	-	1.2e-15	57.5	0.1	1.6e-15	57.1	0.1	1.2	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
MMM1	PF10296.9	gi|84490331|ref|YP_448563.1|	-	0.0042	16.2	0.2	0.005	15.9	0.2	1.1	1	0	0	1	1	1	1	Maintenance	of	mitochondrial	morphology	protein	1
DUF4834	PF16118.5	gi|84490331|ref|YP_448563.1|	-	0.0043	18.0	1.8	0.0093	16.9	1.8	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4834)
Zip	PF02535.22	gi|84490331|ref|YP_448563.1|	-	0.008	15.4	0.0	0.0091	15.3	0.0	1.1	1	0	0	1	1	1	1	ZIP	Zinc	transporter
CRA	PF06589.11	gi|84490331|ref|YP_448563.1|	-	0.027	14.6	7.5	0.045	13.9	7.5	1.5	1	0	0	1	1	1	0	Circumsporozoite-related	antigen	(CRA)
O-antigen_lig	PF13425.6	gi|84490331|ref|YP_448563.1|	-	0.03	13.1	1.6	0.037	12.8	1.6	1.3	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
HHH	PF00633.23	gi|84490331|ref|YP_448563.1|	-	0.033	14.1	0.1	0.057	13.3	0.1	1.4	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
OATP	PF03137.20	gi|84490331|ref|YP_448563.1|	-	0.074	11.3	0.0	0.088	11.1	0.0	1.1	1	0	0	1	1	1	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
DUF2852	PF11014.8	gi|84490331|ref|YP_448563.1|	-	0.088	13.0	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2852)
Nramp	PF01566.18	gi|84490332|ref|YP_448564.1|	-	3.3e-90	302.6	28.1	3.3e-90	302.6	28.1	1.6	2	0	0	2	2	2	1	Natural	resistance-associated	macrophage	protein
DUF1986	PF09342.11	gi|84490332|ref|YP_448564.1|	-	0.016	15.6	0.3	0.28	11.6	0.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1986)
MgtE_N	PF03448.17	gi|84490333|ref|YP_448565.1|	-	1.1e-28	99.8	10.2	2.5e-28	98.7	10.2	1.6	1	0	0	1	1	1	1	MgtE	intracellular	N	domain
CBS	PF00571.28	gi|84490333|ref|YP_448565.1|	-	1.3e-13	51.1	4.6	1.3e-06	28.7	0.8	2.9	2	0	0	2	2	2	2	CBS	domain
PRC	PF05239.16	gi|84490333|ref|YP_448565.1|	-	8.6e-09	35.4	7.2	1.3e-05	25.2	0.2	3.4	3	0	0	3	3	3	2	PRC-barrel	domain
FliG_M	PF14841.6	gi|84490333|ref|YP_448565.1|	-	0.0014	18.8	0.6	2.4	8.4	0.1	2.7	1	1	1	2	2	2	2	FliG	middle	domain
FliG_N	PF14842.6	gi|84490333|ref|YP_448565.1|	-	0.0019	18.7	1.8	1.5	9.4	0.1	2.8	1	1	0	2	2	2	2	FliG	N-terminal	domain
FliG_C	PF01706.16	gi|84490333|ref|YP_448565.1|	-	0.0033	17.6	4.9	0.18	12.0	1.9	2.8	1	1	1	2	2	2	2	FliG	C-terminal	domain
DUF2171	PF09939.9	gi|84490333|ref|YP_448565.1|	-	0.0046	17.2	0.0	0.07	13.4	0.0	2.8	3	0	0	3	3	3	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2171)
Nore1-SARAH	PF16517.5	gi|84490333|ref|YP_448565.1|	-	0.29	11.1	5.4	0.37	10.8	0.1	2.7	2	0	0	2	2	2	0	Novel	Ras	effector	1	C-terminal	SARAH	(Sav/Rassf/Hpo)	domain
ATPgrasp_N	PF18130.1	gi|84490333|ref|YP_448565.1|	-	0.92	10.1	3.4	18	5.9	0.2	3.1	2	1	1	3	3	3	0	ATP-grasp	N-terminal	domain
Gluconate_2-dh3	PF13618.6	gi|84490333|ref|YP_448565.1|	-	1.9	8.7	3.5	1.6	9.0	0.7	2.3	2	1	0	2	2	2	0	Gluconate	2-dehydrogenase	subunit	3
AsnC_trans_reg	PF01037.21	gi|84490334|ref|YP_448566.1|	-	2e-15	56.5	0.3	3.7e-15	55.7	0.3	1.4	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_24	PF13412.6	gi|84490334|ref|YP_448566.1|	-	1.5e-13	50.0	0.9	2.4e-13	49.4	0.9	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|84490334|ref|YP_448566.1|	-	1.6e-10	40.6	0.0	2.4e-10	40.0	0.0	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.19	gi|84490334|ref|YP_448566.1|	-	2e-05	24.3	0.0	4.5e-05	23.3	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|84490334|ref|YP_448566.1|	-	2.6e-05	24.0	0.1	6.5e-05	22.7	0.0	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.22	gi|84490334|ref|YP_448566.1|	-	3.4e-05	23.7	0.1	9.3e-05	22.3	0.1	1.7	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.12	gi|84490334|ref|YP_448566.1|	-	0.001	19.0	0.4	0.0032	17.4	0.4	1.8	1	0	0	1	1	1	1	HTH	domain
RepL	PF05732.11	gi|84490334|ref|YP_448566.1|	-	0.0013	18.2	1.2	0.0017	17.8	1.0	1.4	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_20	PF12840.7	gi|84490334|ref|YP_448566.1|	-	0.0017	18.4	0.0	0.0035	17.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
AsnC_trans_reg2	PF17805.1	gi|84490334|ref|YP_448566.1|	-	0.0018	18.4	0.1	0.0041	17.2	0.0	1.6	2	0	0	2	2	2	1	AsnC-like	ligand	binding	domain
MarR_2	PF12802.7	gi|84490334|ref|YP_448566.1|	-	0.0033	17.3	0.0	0.0055	16.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|84490334|ref|YP_448566.1|	-	0.0045	16.7	0.0	0.0086	15.9	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_CodY	PF08222.11	gi|84490334|ref|YP_448566.1|	-	0.0054	16.3	0.3	0.011	15.2	0.3	1.6	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_34	PF13601.6	gi|84490334|ref|YP_448566.1|	-	0.015	15.4	0.0	0.03	14.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_Mga	PF08280.11	gi|84490334|ref|YP_448566.1|	-	0.032	14.3	1.7	0.052	13.6	0.2	2.1	3	0	0	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Rrf2	PF02082.20	gi|84490334|ref|YP_448566.1|	-	0.069	13.5	0.2	0.21	11.9	0.1	1.8	2	1	0	2	2	2	0	Transcriptional	regulator
HTH_23	PF13384.6	gi|84490334|ref|YP_448566.1|	-	0.11	12.3	0.0	0.19	11.6	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_Crp_2	PF13545.6	gi|84490334|ref|YP_448566.1|	-	0.12	12.4	0.0	0.27	11.2	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|84490334|ref|YP_448566.1|	-	0.14	11.9	0.0	0.27	10.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_36	PF13730.6	gi|84490334|ref|YP_448566.1|	-	0.15	12.0	0.1	0.28	11.2	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|84490334|ref|YP_448566.1|	-	0.2	11.1	0.0	0.33	10.4	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
SM-ATX	PF14438.6	gi|84490336|ref|YP_448568.1|	-	0.12	12.5	0.1	0.26	11.4	0.1	1.6	1	0	0	1	1	1	0	Ataxin	2	SM	domain
Ly49	PF08391.10	gi|84490337|ref|YP_448569.1|	-	0.049	14.0	5.0	0.12	12.8	5.0	1.8	1	1	0	1	1	1	0	Ly49-like	protein,	N-terminal	region
Baculo_11_kDa	PF06143.11	gi|84490337|ref|YP_448569.1|	-	0.14	11.8	2.9	0.094	12.3	0.9	1.8	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
CbiX	PF01903.17	gi|84490339|ref|YP_448571.1|	-	1.5e-56	189.3	0.6	2.2e-27	95.5	0.0	2.3	2	1	0	2	2	2	2	CbiX
CbiK	PF06180.11	gi|84490339|ref|YP_448571.1|	-	1.3e-13	50.8	0.3	3.7e-06	26.5	0.0	2.2	2	0	0	2	2	2	2	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.19	gi|84490339|ref|YP_448571.1|	-	1e-08	34.6	0.0	0.00094	18.3	0.0	2.4	2	0	0	2	2	2	2	Ferrochelatase
TERF2_RBM	PF16772.5	gi|84490339|ref|YP_448571.1|	-	0.11	12.0	0.0	2.5	7.6	0.0	2.4	2	0	0	2	2	2	0	Telomeric	repeat-binding	factor	2	Rap1-binding	motif
DFP	PF04127.15	gi|84490339|ref|YP_448571.1|	-	0.12	12.2	0.0	2.2	8.1	0.0	2.1	2	0	0	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
CheR	PF01739.18	gi|84490339|ref|YP_448571.1|	-	0.18	11.3	0.0	5.2	6.5	0.0	2.2	2	0	0	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
SelP_N	PF04592.14	gi|84490339|ref|YP_448571.1|	-	3	7.2	8.2	4.4	6.6	8.2	1.2	1	0	0	1	1	1	0	Selenoprotein	P,	N	terminal	region
OB_aCoA_assoc	PF01796.17	gi|84490340|ref|YP_448572.1|	-	3.6e-22	78.1	0.0	5e-22	77.7	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|84490340|ref|YP_448572.1|	-	3.3e-11	42.8	0.5	5.5e-11	42.1	0.5	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_4	PF13717.6	gi|84490340|ref|YP_448572.1|	-	0.0012	18.7	2.4	0.13	12.2	0.0	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
Prok-RING_1	PF14446.6	gi|84490340|ref|YP_448572.1|	-	0.0046	16.9	2.2	0.0085	16.0	2.2	1.4	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
HypA	PF01155.19	gi|84490340|ref|YP_448572.1|	-	0.023	14.7	1.0	0.053	13.5	0.5	1.8	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TackOD1	PF18551.1	gi|84490340|ref|YP_448572.1|	-	0.043	13.5	0.1	0.06	13.0	0.1	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
Rubredoxin_2	PF18073.1	gi|84490340|ref|YP_448572.1|	-	0.085	12.6	2.5	0.27	11.0	2.5	1.8	1	1	0	1	1	1	0	Rubredoxin	metal	binding	domain
Auto_anti-p27	PF06677.12	gi|84490340|ref|YP_448572.1|	-	0.1	12.8	0.9	0.2	11.9	0.9	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn-ribbon_8	PF09723.10	gi|84490340|ref|YP_448572.1|	-	1.3	9.2	5.3	5.9	7.1	5.3	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|84490340|ref|YP_448572.1|	-	1.8	8.6	4.9	0.44	10.6	0.3	2.0	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ACC	PF17848.1	gi|84490340|ref|YP_448572.1|	-	3.7	7.7	7.3	12	6.1	7.3	1.9	1	1	0	1	1	1	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-C2HC_2	PF13913.6	gi|84490340|ref|YP_448572.1|	-	6.5	6.8	8.2	0.47	10.4	1.0	2.1	1	1	1	2	2	2	0	zinc-finger	of	a	C2HC-type
CbiX	PF01903.17	gi|84490341|ref|YP_448573.1|	-	2.5e-30	104.9	3.9	4.2e-30	104.2	3.9	1.3	1	1	0	1	1	1	1	CbiX
CbiK	PF06180.11	gi|84490341|ref|YP_448573.1|	-	1.4e-05	24.6	0.0	2e-05	24.1	0.0	1.2	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.19	gi|84490341|ref|YP_448573.1|	-	0.00077	18.6	0.0	0.00089	18.4	0.0	1.2	1	0	0	1	1	1	1	Ferrochelatase
SelP_N	PF04592.14	gi|84490341|ref|YP_448573.1|	-	0.13	11.6	16.8	0.18	11.2	16.8	1.2	1	0	0	1	1	1	0	Selenoprotein	P,	N	terminal	region
NicO	PF03824.16	gi|84490341|ref|YP_448573.1|	-	1.4	8.1	4.6	1.8	7.8	4.6	1.2	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
AIRS	PF00586.24	gi|84490342|ref|YP_448574.1|	-	8e-21	74.5	0.0	1.3e-20	73.8	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|84490342|ref|YP_448574.1|	-	2.8e-05	24.3	0.0	4.2e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Radical_SAM	PF04055.21	gi|84490343|ref|YP_448575.1|	-	1.9e-20	73.9	0.0	3e-20	73.3	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|84490343|ref|YP_448575.1|	-	2.7e-07	30.9	0.0	5.9e-07	29.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DiS_P_DiS	PF06750.13	gi|84490343|ref|YP_448575.1|	-	7.7	6.7	6.3	1.2	9.3	1.0	2.4	2	1	0	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
DUF2207	PF09972.9	gi|84490344|ref|YP_448576.1|	-	3.1e-96	323.1	12.8	4e-96	322.7	12.8	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
Orf78	PF06024.12	gi|84490344|ref|YP_448576.1|	-	0.033	14.5	0.6	0.23	11.7	0.1	2.5	2	0	0	2	2	2	0	Orf78	(ac78)
AA_permease_2	PF13520.6	gi|84490344|ref|YP_448576.1|	-	0.074	11.9	1.3	0.079	11.8	0.2	1.6	2	0	0	2	2	2	0	Amino	acid	permease
PrgI	PF12666.7	gi|84490344|ref|YP_448576.1|	-	0.11	13.2	0.0	0.35	11.6	0.0	1.9	1	0	0	1	1	1	0	PrgI	family	protein
DUF4730	PF15873.5	gi|84490344|ref|YP_448576.1|	-	3.6	7.9	5.7	1.4	9.2	1.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4730)
DUF2207	PF09972.9	gi|84490345|ref|YP_448577.1|	-	2.1e-54	185.1	26.6	2.1e-54	185.1	26.6	1.4	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2207)
Pox_A14	PF05767.12	gi|84490345|ref|YP_448577.1|	-	0.47	10.6	3.1	2.1	8.5	0.0	3.2	3	0	0	3	3	3	0	Poxvirus	virion	envelope	protein	A14
LemA	PF04011.12	gi|84490346|ref|YP_448578.1|	-	3.2e-65	218.5	2.9	4.3e-65	218.1	2.9	1.2	1	0	0	1	1	1	1	LemA	family
TerD	PF02342.18	gi|84490346|ref|YP_448578.1|	-	0.022	14.3	0.1	0.031	13.8	0.1	1.2	1	0	0	1	1	1	0	TerD	domain
BBP1_N	PF15271.6	gi|84490346|ref|YP_448578.1|	-	0.063	14.1	0.2	0.086	13.6	0.2	1.2	1	0	0	1	1	1	0	Spindle	pole	body	component	BBP1,	Mps2-binding	protein
Tweety	PF04906.13	gi|84490346|ref|YP_448578.1|	-	0.086	11.5	0.2	0.11	11.2	0.2	1.2	1	0	0	1	1	1	0	Tweety
DUF327	PF03885.13	gi|84490346|ref|YP_448578.1|	-	0.11	12.4	1.1	0.3	11.0	0.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF327)
DUF3139	PF11337.8	gi|84490346|ref|YP_448578.1|	-	0.12	13.1	2.4	0.13	12.9	0.6	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
DUF4492	PF14899.6	gi|84490346|ref|YP_448578.1|	-	0.18	11.7	2.2	0.49	10.3	2.2	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4492)
Radical_SAM	PF04055.21	gi|84490347|ref|YP_448579.1|	-	6.2e-11	43.0	0.2	4.6e-10	40.1	0.0	2.3	3	0	0	3	3	3	1	Radical	SAM	superfamily
HHH_3	PF12836.7	gi|84490347|ref|YP_448579.1|	-	1.2e-06	28.6	1.9	2.8e-06	27.5	0.2	2.4	2	1	1	3	3	3	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|84490347|ref|YP_448579.1|	-	0.0001	22.0	0.0	0.00034	20.3	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Fer4_12	PF13353.6	gi|84490347|ref|YP_448579.1|	-	0.028	14.7	0.1	0.078	13.2	0.1	1.7	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
HHH_5	PF14520.6	gi|84490347|ref|YP_448579.1|	-	0.028	15.0	0.0	0.08	13.6	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
HHH_8	PF14716.6	gi|84490347|ref|YP_448579.1|	-	0.035	14.5	0.0	0.1	13.0	0.0	1.8	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
DUF167	PF02594.16	gi|84490347|ref|YP_448579.1|	-	0.089	12.9	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	ACR,	YggU	family	COG1872
AAA_31	PF13614.6	gi|84490349|ref|YP_448581.1|	-	1.4e-61	207.4	0.4	1.9e-61	207.0	0.4	1.2	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|84490349|ref|YP_448581.1|	-	1.9e-24	86.2	0.0	2.4e-24	85.8	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
CBP_BcsQ	PF06564.12	gi|84490349|ref|YP_448581.1|	-	6.1e-14	52.1	0.0	1.3e-13	51.0	0.0	1.4	1	1	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
MipZ	PF09140.11	gi|84490349|ref|YP_448581.1|	-	1.2e-12	47.7	0.1	7.3e-12	45.1	0.1	1.9	1	1	0	1	1	1	1	ATPase	MipZ
ParA	PF10609.9	gi|84490349|ref|YP_448581.1|	-	3.9e-12	46.1	0.8	6.9e-11	42.1	0.8	2.4	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
Fer4_NifH	PF00142.18	gi|84490349|ref|YP_448581.1|	-	4.1e-11	42.8	0.2	2.3e-07	30.5	0.2	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|84490349|ref|YP_448581.1|	-	4.7e-07	29.3	0.4	2.5e-06	26.9	0.1	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
VirC1	PF07015.11	gi|84490349|ref|YP_448581.1|	-	0.0025	17.2	1.0	0.0054	16.1	0.1	1.9	2	1	0	2	2	2	1	VirC1	protein
MeaB	PF03308.16	gi|84490349|ref|YP_448581.1|	-	0.0085	15.1	0.0	0.013	14.5	0.0	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
CLP1_P	PF16575.5	gi|84490349|ref|YP_448581.1|	-	0.019	14.8	0.0	0.034	13.9	0.0	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_25	PF13481.6	gi|84490349|ref|YP_448581.1|	-	0.049	13.2	0.1	0.085	12.4	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|84490349|ref|YP_448581.1|	-	0.07	12.8	0.0	0.09	12.5	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|84490349|ref|YP_448581.1|	-	0.16	11.6	0.1	0.36	10.4	0.1	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
FTHFS	PF01268.19	gi|84490349|ref|YP_448581.1|	-	0.19	9.9	0.1	0.29	9.3	0.1	1.2	1	0	0	1	1	1	0	Formate--tetrahydrofolate	ligase
Big_3_5	PF16640.5	gi|84490350|ref|YP_448582.1|	-	3.9e-18	65.4	4.2	0.02	15.1	0.0	6.6	6	0	0	6	6	6	5	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|84490350|ref|YP_448582.1|	-	3.8e-06	27.1	8.5	6.9	7.0	0.1	7.0	5	2	1	6	6	6	3	Carboxypeptidase	regulatory-like	domain
PDZ	PF00595.24	gi|84490350|ref|YP_448582.1|	-	0.0074	16.6	0.6	3.2	8.2	0.0	3.1	2	0	0	2	2	2	1	PDZ	domain
A_amylase_inhib	PF01356.19	gi|84490350|ref|YP_448582.1|	-	0.04	13.9	4.1	14	5.8	0.0	4.4	5	0	0	5	5	5	0	Alpha	amylase	inhibitor
PDZ_6	PF17820.1	gi|84490350|ref|YP_448582.1|	-	0.085	12.7	0.2	14	5.6	0.0	3.4	3	0	0	3	3	3	0	PDZ	domain
Phage_CI_C	PF16452.5	gi|84490350|ref|YP_448582.1|	-	0.13	12.6	5.9	12	6.3	0.1	5.3	6	1	0	6	6	6	0	Bacteriophage	CI	repressor	C-terminal	domain
Macoilin	PF09726.9	gi|84490350|ref|YP_448582.1|	-	0.42	9.1	15.4	0.61	8.6	15.4	1.1	1	0	0	1	1	1	0	Macoilin	family
DUF3659	PF12396.8	gi|84490350|ref|YP_448582.1|	-	1	9.3	14.0	4	7.4	0.2	4.9	6	0	0	6	6	6	0	Protein	of	unknown	function	(DUF3659)
tRNA-Thr_ED	PF08915.11	gi|84490351|ref|YP_448583.1|	-	5.5e-52	175.5	0.1	1.5e-51	174.1	0.1	1.8	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|84490351|ref|YP_448583.1|	-	4.2e-25	87.7	1.3	1e-24	86.5	1.3	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|84490351|ref|YP_448583.1|	-	5.1e-16	59.1	0.1	1.1e-15	58.1	0.1	1.6	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
YkyB	PF14177.6	gi|84490351|ref|YP_448583.1|	-	0.0024	18.2	0.3	0.013	15.8	0.0	2.1	2	0	0	2	2	2	1	YkyB-like	protein
Tox-HNH-EHHH	PF15657.6	gi|84490351|ref|YP_448583.1|	-	0.01	16.2	0.4	0.034	14.5	0.1	2.0	2	0	0	2	2	2	0	HNH/Endo	VII	superfamily	nuclease	toxins
CpxA_peri	PF16527.5	gi|84490351|ref|YP_448583.1|	-	0.064	13.6	0.5	0.87	10.0	0.0	2.6	2	0	0	2	2	2	0	Two-component	sensor	protein	CpxA,	periplasmic	domain
DALR_1	PF05746.15	gi|84490352|ref|YP_448584.1|	-	8.6e-31	106.6	1.0	2.6e-30	105.0	1.0	1.9	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
tRNA-synt_1d	PF00750.19	gi|84490352|ref|YP_448584.1|	-	4.7e-26	91.6	1.1	8.8e-26	90.7	1.1	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
Arg_tRNA_synt_N	PF03485.16	gi|84490352|ref|YP_448584.1|	-	2.4e-24	85.7	0.4	7.6e-24	84.1	0.4	1.9	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.18	gi|84490352|ref|YP_448584.1|	-	2.6e-07	29.9	0.1	0.01	14.8	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.19	gi|84490352|ref|YP_448584.1|	-	0.00014	21.4	0.1	0.00026	20.4	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|84490352|ref|YP_448584.1|	-	0.0033	16.2	0.0	0.48	9.1	0.1	3.0	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
Turandot	PF07240.11	gi|84490352|ref|YP_448584.1|	-	0.023	14.7	0.2	0.056	13.4	0.2	1.7	1	0	0	1	1	1	0	Stress-inducible	humoral	factor	Turandot
Serum_albumin	PF00273.20	gi|84490352|ref|YP_448584.1|	-	0.073	12.8	2.5	0.063	13.0	0.8	1.7	2	0	0	2	2	2	0	Serum	albumin	family
TSC22	PF01166.18	gi|84490352|ref|YP_448584.1|	-	0.1	12.9	0.0	0.33	11.3	0.0	1.9	1	0	0	1	1	1	0	TSC-22/dip/bun	family
Peptidase_S24	PF00717.23	gi|84490353|ref|YP_448585.1|	-	7.3e-06	25.8	0.5	1.2e-05	25.1	0.5	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
Reovirus_L2	PF06016.11	gi|84490353|ref|YP_448585.1|	-	0.036	11.3	0.1	0.041	11.1	0.1	1.1	1	0	0	1	1	1	0	Reovirus	core-spike	protein	lambda-2	(L2)
ILVD_EDD	PF00920.21	gi|84490354|ref|YP_448586.1|	-	9.5e-214	710.8	4.9	1.1e-213	710.6	4.9	1.0	1	0	0	1	1	1	1	Dehydratase	family
Orn_Arg_deC_N	PF02784.16	gi|84490355|ref|YP_448587.1|	-	2.1e-55	187.8	0.0	3.1e-55	187.2	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|84490355|ref|YP_448587.1|	-	5.4e-25	87.5	0.0	6.9e-25	87.1	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Ala_racemase_N	PF01168.20	gi|84490355|ref|YP_448587.1|	-	0.00025	20.8	0.0	0.00037	20.2	0.0	1.3	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
DAP_epimerase	PF01678.19	gi|84490356|ref|YP_448588.1|	-	2e-53	179.7	1.2	7.2e-31	106.9	0.2	2.1	2	0	0	2	2	2	2	Diaminopimelate	epimerase
PhzC-PhzF	PF02567.16	gi|84490356|ref|YP_448588.1|	-	0.00063	19.3	0.1	0.022	14.3	0.0	2.4	2	1	0	2	2	2	1	Phenazine	biosynthesis-like	protein
Pro_racemase	PF05544.11	gi|84490356|ref|YP_448588.1|	-	0.0051	15.9	0.2	0.024	13.7	0.0	2.0	2	0	0	2	2	2	1	Proline	racemase
Fer4	PF00037.27	gi|84490358|ref|YP_448590.1|	-	2e-10	40.0	12.9	2.9e-05	23.7	2.2	3.0	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|84490358|ref|YP_448590.1|	-	2.5e-07	31.2	9.2	3.2e-05	24.4	1.5	3.3	3	1	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|84490358|ref|YP_448590.1|	-	1.6e-06	28.1	17.7	1.6e-06	28.1	17.7	2.6	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|84490358|ref|YP_448590.1|	-	2e-06	27.9	12.6	2e-06	27.9	12.6	2.5	2	2	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|84490358|ref|YP_448590.1|	-	4.3e-06	26.8	28.4	0.00015	21.8	17.3	2.7	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|84490358|ref|YP_448590.1|	-	5.8e-05	23.9	9.9	0.001	19.9	1.5	3.4	2	2	1	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|84490358|ref|YP_448590.1|	-	0.00064	19.7	23.1	0.012	15.7	3.7	3.0	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|84490358|ref|YP_448590.1|	-	0.0022	18.0	2.7	0.0022	18.0	2.7	3.5	4	0	0	4	4	3	1	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|84490358|ref|YP_448590.1|	-	0.012	16.0	2.3	0.012	16.0	2.3	3.6	4	0	0	4	4	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|84490358|ref|YP_448590.1|	-	0.048	14.6	7.0	0.048	14.6	7.0	3.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|84490358|ref|YP_448590.1|	-	0.09	13.3	3.8	0.09	13.3	3.8	3.3	1	1	3	4	4	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|84490358|ref|YP_448590.1|	-	0.94	10.3	16.1	1.5	9.6	2.2	2.7	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|84490358|ref|YP_448590.1|	-	4.5	7.8	28.2	0.43	11.1	5.3	3.4	2	2	1	3	3	3	0	4Fe-4S	dicluster	domain
TP_methylase	PF00590.20	gi|84490359|ref|YP_448591.1|	-	4.2e-30	105.3	0.1	6e-30	104.8	0.1	1.2	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
zf-like	PF04071.12	gi|84490359|ref|YP_448591.1|	-	2.6e-26	91.3	8.2	4.6e-26	90.5	8.2	1.4	1	0	0	1	1	1	1	Cysteine-rich	small	domain
Pox_G7	PF05503.12	gi|84490359|ref|YP_448591.1|	-	0.085	11.8	0.1	0.14	11.1	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	G7-like
DNA_pol_E_B	PF04042.16	gi|84490361|ref|YP_448593.1|	-	6.3e-15	55.1	0.0	1.8e-14	53.6	0.0	1.7	2	0	0	2	2	2	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos	PF00149.28	gi|84490361|ref|YP_448593.1|	-	1.1e-14	55.5	1.2	1.1e-14	55.5	1.2	2.1	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|84490361|ref|YP_448593.1|	-	3.9e-05	23.9	2.1	9.9e-05	22.6	1.1	2.1	2	1	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
Orn_Arg_deC_N	PF02784.16	gi|84490361|ref|YP_448593.1|	-	0.017	14.5	0.0	0.043	13.2	0.0	1.6	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
CryBP1	PF07029.11	gi|84490361|ref|YP_448593.1|	-	0.051	13.7	0.3	0.051	13.7	0.3	1.7	2	0	0	2	2	2	0	CryBP1	protein
tRNA_anti-codon	PF01336.25	gi|84490361|ref|YP_448593.1|	-	0.064	13.3	0.3	0.16	12.0	0.1	1.8	2	0	0	2	2	2	0	OB-fold	nucleic	acid	binding	domain
DUF4170	PF13773.6	gi|84490361|ref|YP_448593.1|	-	0.12	12.6	0.0	0.61	10.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4170)
ER	PF01133.17	gi|84490361|ref|YP_448593.1|	-	0.5	10.4	5.2	0.18	11.8	1.4	2.2	2	0	0	2	2	2	0	Enhancer	of	rudimentary
Aldolase_II	PF00596.21	gi|84490362|ref|YP_448594.1|	-	4.1e-44	150.7	0.0	4.6e-44	150.6	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
LigB	PF02900.18	gi|84490362|ref|YP_448594.1|	-	0.082	12.0	0.0	0.12	11.4	0.0	1.2	1	0	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
YolD	PF08863.10	gi|84490362|ref|YP_448594.1|	-	0.15	12.1	1.9	0.36	10.9	1.3	1.9	2	0	0	2	2	2	0	YolD-like	protein
UPF0147	PF03685.13	gi|84490363|ref|YP_448595.1|	-	5.3e-33	112.9	3.2	6.1e-33	112.7	3.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.12	gi|84490363|ref|YP_448595.1|	-	0.043	14.1	0.2	2.4	8.5	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0253)
CbiG_N	PF11760.8	gi|84490364|ref|YP_448596.1|	-	9e-35	118.5	0.2	1.4e-34	117.9	0.2	1.3	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.16	gi|84490364|ref|YP_448596.1|	-	4.4e-29	101.4	0.0	9.9e-27	93.8	0.0	2.2	2	0	0	2	2	2	2	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.8	gi|84490364|ref|YP_448596.1|	-	0.066	13.3	0.0	0.2	11.8	0.0	1.9	2	0	0	2	2	2	0	Cobalamin	biosynthesis	central	region
CobD_Cbib	PF03186.13	gi|84490365|ref|YP_448597.1|	-	9.7e-87	290.7	1.1	1.2e-86	290.4	1.1	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
YniB	PF14002.6	gi|84490365|ref|YP_448597.1|	-	0.0062	16.3	8.0	0.19	11.5	0.3	3.0	3	0	0	3	3	3	2	YniB-like	protein
Phlebovirus_G1	PF07243.11	gi|84490365|ref|YP_448597.1|	-	0.25	9.7	2.0	0.39	9.0	2.0	1.3	1	0	0	1	1	1	0	Phlebovirus	glycoprotein	G1
Tmemb_9	PF05434.11	gi|84490365|ref|YP_448597.1|	-	6.8	6.6	15.2	6.4	6.7	2.2	2.3	2	0	0	2	2	2	0	TMEM9
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosphaera_stadtmanae_DSM_3091_uid58407/NC_007681.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosphaera_stadtmanae_DSM_3091_uid58407/NC_007681.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosphaera_stadtmanae_DSM_3091_uid58407/NC_007681.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosphaera_stadtmanae_DSM_3091_uid58407/NC_007681.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 16:01:01 2019
# [ok]