# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SBP_bac_5 PF00496.17 gi|452208620|ref|YP_007488734.1| - 1.4e-76 257.8 6.9 1.7e-76 257.4 4.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle EF-hand_5 PF13202.1 gi|452208620|ref|YP_007488734.1| - 0.11 11.9 1.2 0.35 10.2 0.2 2.2 2 0 0 2 2 2 0 EF hand EF-hand_1 PF00036.27 gi|452208620|ref|YP_007488734.1| - 0.23 10.8 0.9 0.52 9.7 0.1 2.0 2 0 0 2 2 2 0 EF hand SBP_bac_5 PF00496.17 gi|452208621|ref|YP_007488735.1| - 9.6e-73 245.1 8.5 1.3e-72 244.7 5.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4329 PF14220.1 gi|452208621|ref|YP_007488735.1| - 0.038 13.9 0.0 0.099 12.6 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4329) BPD_transp_1 PF00528.17 gi|452208622|ref|YP_007488736.1| - 6.5e-41 139.8 11.0 8.8e-41 139.4 7.6 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|452208623|ref|YP_007488737.1| - 7.6e-22 77.7 11.1 7.6e-22 77.7 7.7 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1719 PF08224.6 gi|452208623|ref|YP_007488737.1| - 0.15 11.0 0.0 0.22 10.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Caerin_1 PF07440.7 gi|452208623|ref|YP_007488737.1| - 1.9 8.4 4.7 0.51 10.2 0.5 2.1 2 0 0 2 2 2 0 Caerin 1 protein SUR7 PF06687.7 gi|452208623|ref|YP_007488737.1| - 9.2 5.7 8.8 0.53 9.8 1.9 2.1 1 1 1 2 2 2 0 SUR7/PalI family ABC_tran PF00005.22 gi|452208624|ref|YP_007488738.1| - 4e-22 78.9 0.0 5.9e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|452208624|ref|YP_007488738.1| - 2.6e-11 43.6 0.0 5.2e-11 42.7 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|452208624|ref|YP_007488738.1| - 8.2e-06 25.9 0.0 0.005 16.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|452208624|ref|YP_007488738.1| - 2.3e-05 24.5 0.0 5.5e-05 23.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452208624|ref|YP_007488738.1| - 0.0003 20.0 0.3 0.28 10.3 0.1 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.16 gi|452208624|ref|YP_007488738.1| - 0.0006 19.0 0.2 0.0016 17.6 0.1 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|452208624|ref|YP_007488738.1| - 0.0012 18.8 0.0 0.0019 18.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|452208624|ref|YP_007488738.1| - 0.0012 18.3 0.1 0.0024 17.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|452208624|ref|YP_007488738.1| - 0.006 16.3 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_33 PF13671.1 gi|452208624|ref|YP_007488738.1| - 0.015 15.2 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452208624|ref|YP_007488738.1| - 0.05 13.0 0.3 0.99 8.7 0.2 2.2 1 1 1 2 2 2 0 AAA-like domain AAA_25 PF13481.1 gi|452208624|ref|YP_007488738.1| - 0.051 12.9 0.3 0.61 9.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain DUF258 PF03193.11 gi|452208624|ref|YP_007488738.1| - 0.08 12.1 0.0 0.19 10.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function, DUF258 IstB_IS21 PF01695.12 gi|452208624|ref|YP_007488738.1| - 0.1 12.0 0.0 0.2 11.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein NB-ARC PF00931.17 gi|452208624|ref|YP_007488738.1| - 0.13 11.0 0.1 0.29 9.9 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain ABC_tran PF00005.22 gi|452208625|ref|YP_007488739.1| - 1.6e-24 86.7 0.0 2.2e-24 86.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452208625|ref|YP_007488739.1| - 6.6e-07 29.5 0.4 0.0053 16.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|452208625|ref|YP_007488739.1| - 3.8e-06 27.0 0.0 6.6e-06 26.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452208625|ref|YP_007488739.1| - 9.9e-05 21.6 0.0 0.0065 15.7 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|452208625|ref|YP_007488739.1| - 0.00057 19.0 0.2 0.001 18.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|452208625|ref|YP_007488739.1| - 0.00065 20.5 0.0 0.00093 20.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452208625|ref|YP_007488739.1| - 0.0018 18.5 0.0 0.0042 17.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|452208625|ref|YP_007488739.1| - 0.0031 17.2 0.7 0.0094 15.6 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.1 gi|452208625|ref|YP_007488739.1| - 0.0032 16.9 0.2 0.0032 16.9 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452208625|ref|YP_007488739.1| - 0.0096 15.3 0.1 0.1 11.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|452208625|ref|YP_007488739.1| - 0.0098 15.6 0.5 2.3 7.8 0.1 2.1 2 0 0 2 2 2 1 NTPase UPF0079 PF02367.12 gi|452208625|ref|YP_007488739.1| - 0.012 15.2 0.1 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 PduV-EutP PF10662.4 gi|452208625|ref|YP_007488739.1| - 0.013 15.0 0.4 0.027 13.9 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.1 gi|452208625|ref|YP_007488739.1| - 0.02 14.8 0.1 0.036 14.0 0.1 1.4 1 0 0 1 1 1 0 AAA ATPase domain Miro PF08477.8 gi|452208625|ref|YP_007488739.1| - 0.038 14.4 0.0 0.074 13.5 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein AAA_10 PF12846.2 gi|452208625|ref|YP_007488739.1| - 0.042 13.2 0.3 0.29 10.5 0.1 1.9 2 0 0 2 2 2 0 AAA-like domain T2SE PF00437.15 gi|452208625|ref|YP_007488739.1| - 0.052 12.4 0.0 0.072 11.9 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.18 gi|452208625|ref|YP_007488739.1| - 0.063 13.2 0.6 0.18 11.8 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.1 gi|452208625|ref|YP_007488739.1| - 0.12 12.3 0.0 4.7 7.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain CoaE PF01121.15 gi|452208625|ref|YP_007488739.1| - 0.13 11.6 0.2 0.93 8.8 0.1 2.1 2 0 0 2 2 2 0 Dephospho-CoA kinase AAA PF00004.24 gi|452208625|ref|YP_007488739.1| - 0.13 12.4 0.2 0.35 11.0 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.1 gi|452208625|ref|YP_007488739.1| - 0.14 12.4 0.3 0.83 9.9 0.2 2.2 1 1 0 1 1 1 0 AAA domain DUF389 PF04087.9 gi|452208626|ref|YP_007488740.1| - 1.2e-37 128.9 17.7 1.2e-37 128.9 12.3 2.4 1 1 1 2 2 2 1 Domain of unknown function (DUF389) G0-G1_switch_2 PF15103.1 gi|452208626|ref|YP_007488740.1| - 0.01 16.0 0.1 0.023 14.9 0.1 1.5 1 0 0 1 1 1 0 G0/G1 switch protein 2 SCIMP PF15050.1 gi|452208626|ref|YP_007488740.1| - 0.018 14.9 0.0 0.041 13.7 0.0 1.5 1 0 0 1 1 1 0 SCIMP protein DUF4330 PF14221.1 gi|452208626|ref|YP_007488740.1| - 0.028 14.2 0.8 0.079 12.8 0.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF998 PF06197.8 gi|452208627|ref|YP_007488741.1| - 3.4e-24 85.1 19.8 4.7e-24 84.6 13.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DNA_ligase_ZBD PF03119.11 gi|452208628|ref|YP_007488742.1| - 0.00033 20.2 2.3 0.00042 19.9 0.7 1.8 2 1 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain Lar_restr_allev PF14354.1 gi|452208628|ref|YP_007488742.1| - 0.013 15.7 0.3 0.014 15.6 0.2 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF2256 PF10013.4 gi|452208628|ref|YP_007488742.1| - 0.023 14.4 0.6 0.047 13.4 0.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-RING_3 PF14369.1 gi|452208628|ref|YP_007488742.1| - 0.03 14.3 0.1 0.053 13.5 0.1 1.4 1 0 0 1 1 1 0 zinc-finger DUF1272 PF06906.6 gi|452208628|ref|YP_007488742.1| - 0.046 13.5 1.5 0.18 11.6 1.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) TF_Zn_Ribbon PF08271.7 gi|452208628|ref|YP_007488742.1| - 0.048 12.9 0.3 0.068 12.5 0.2 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding FlhC PF05280.6 gi|452208628|ref|YP_007488742.1| - 0.064 12.7 0.5 0.07 12.6 0.4 1.0 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) zf-MYND PF01753.13 gi|452208628|ref|YP_007488742.1| - 0.12 12.3 0.6 0.14 12.0 0.4 1.2 1 0 0 1 1 1 0 MYND finger zf-ribbon_3 PF13248.1 gi|452208628|ref|YP_007488742.1| - 0.13 11.5 0.8 0.24 10.6 0.5 1.6 1 1 0 1 1 1 0 zinc-ribbon domain NinG PF05766.7 gi|452208628|ref|YP_007488742.1| - 0.14 11.9 1.1 0.13 12.0 0.8 1.0 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein zf-HIT PF04438.11 gi|452208628|ref|YP_007488742.1| - 0.14 11.7 2.4 0.65 9.6 1.6 1.8 1 1 1 2 2 2 0 HIT zinc finger zf-FCS PF06467.9 gi|452208628|ref|YP_007488742.1| - 0.35 10.5 1.9 1.3 8.6 1.3 1.9 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif DUF1699 PF08004.6 gi|452208629|ref|YP_007488743.1| - 5.4e-28 97.1 0.4 6e-28 96.9 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DnaJ_CXXCXGXG PF00684.14 gi|452208630|ref|YP_007488744.1| - 0.0008 19.4 16.4 0.04 13.9 11.4 3.3 1 1 0 1 1 1 1 DnaJ central domain Rad50_zn_hook PF04423.9 gi|452208630|ref|YP_007488744.1| - 0.12 11.8 0.1 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif DUF1356 PF07092.7 gi|452208630|ref|YP_007488744.1| - 2.1 7.5 5.3 12 4.9 0.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF1356) zf-CHCC PF10276.4 gi|452208630|ref|YP_007488744.1| - 2.3 8.1 6.9 0.22 11.3 1.1 2.0 1 1 0 2 2 2 0 Zinc-finger domain zf-CCHC PF00098.18 gi|452208630|ref|YP_007488744.1| - 6 6.9 21.2 3.5 7.7 1.0 4.1 4 0 0 4 4 4 0 Zinc knuckle DUF1428 PF07237.6 gi|452208631|ref|YP_007488745.1| - 1.2e-39 134.2 1.1 1.6e-39 133.9 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.8 gi|452208631|ref|YP_007488745.1| - 0.029 14.3 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 NIPSNAP DUF658 PF04936.7 gi|452208631|ref|YP_007488745.1| - 0.051 13.4 0.2 0.083 12.7 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF658) Bactofilin PF04519.8 gi|452208633|ref|YP_007488747.1| - 0.014 15.4 0.1 0.024 14.6 0.1 1.5 1 0 0 1 1 1 0 Polymer-forming cytoskeletal Sox_C_TAD PF12067.3 gi|452208633|ref|YP_007488747.1| - 0.11 12.6 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Sox C-terminal transactivation domain Prenyltransf PF01255.14 gi|452208635|ref|YP_007488749.1| - 2.7e-19 69.1 0.0 7.1e-19 67.8 0.0 1.6 1 1 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Methyltransf_31 PF13847.1 gi|452208636|ref|YP_007488750.1| - 6.1e-20 71.3 0.0 7.8e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452208636|ref|YP_007488750.1| - 9e-20 70.9 0.2 1.3e-19 70.5 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.6 gi|452208636|ref|YP_007488750.1| - 5e-18 65.3 0.0 7.2e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_18 PF12847.2 gi|452208636|ref|YP_007488750.1| - 2.2e-17 63.6 0.2 3.8e-17 62.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452208636|ref|YP_007488750.1| - 2.1e-16 60.2 0.1 2.8e-16 59.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452208636|ref|YP_007488750.1| - 5.4e-15 55.5 0.2 9e-15 54.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452208636|ref|YP_007488750.1| - 2.6e-13 49.9 0.0 3.3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452208636|ref|YP_007488750.1| - 3.1e-11 43.3 0.0 4.3e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|452208636|ref|YP_007488750.1| - 1.9e-10 40.2 0.0 2.3e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB CMAS PF02353.15 gi|452208636|ref|YP_007488750.1| - 7.1e-10 38.4 0.0 8.1e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|452208636|ref|YP_007488750.1| - 8.6e-09 34.9 0.0 1.1e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|452208636|ref|YP_007488750.1| - 1.6e-08 33.9 0.1 2.1e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.8 gi|452208636|ref|YP_007488750.1| - 2.6e-05 23.4 0.0 3.3e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|452208636|ref|YP_007488750.1| - 5.1e-05 22.8 0.2 9.9e-05 21.9 0.1 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.6 gi|452208636|ref|YP_007488750.1| - 5.9e-05 22.5 0.0 7.5e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.12 gi|452208636|ref|YP_007488750.1| - 0.00024 20.1 0.1 0.00073 18.6 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase MetW PF07021.7 gi|452208636|ref|YP_007488750.1| - 0.00087 18.7 0.1 0.0012 18.2 0.1 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.14 gi|452208636|ref|YP_007488750.1| - 0.0063 16.0 0.2 0.0098 15.4 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Spermine_synth PF01564.12 gi|452208636|ref|YP_007488750.1| - 0.0081 15.1 0.1 0.0098 14.8 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_32 PF13679.1 gi|452208636|ref|YP_007488750.1| - 0.0085 15.7 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain AdoMet_MTase PF07757.8 gi|452208636|ref|YP_007488750.1| - 0.014 15.4 0.0 0.023 14.7 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase UPF0020 PF01170.13 gi|452208636|ref|YP_007488750.1| - 0.022 14.3 0.2 0.032 13.8 0.1 1.4 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.10 gi|452208636|ref|YP_007488750.1| - 0.11 12.1 0.3 0.47 10.0 0.2 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase zinc_ribbon_6 PF14599.1 gi|452208637|ref|YP_007488751.1| - 0.03 14.1 2.5 0.31 10.8 0.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon zf-HYPF PF07503.7 gi|452208637|ref|YP_007488751.1| - 9.2 5.7 9.1 12 5.4 3.3 2.2 2 0 0 2 2 2 0 HypF finger zinc_ribbon_6 PF14599.1 gi|452208639|ref|YP_007488753.1| - 0.0033 17.1 0.3 0.0056 16.4 0.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.6 gi|452208639|ref|YP_007488753.1| - 0.033 13.8 1.4 0.043 13.4 0.9 1.2 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|452208639|ref|YP_007488753.1| - 0.091 12.2 2.3 0.36 10.3 1.6 1.8 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2_3 PF13878.1 gi|452208639|ref|YP_007488753.1| - 0.16 11.5 1.7 0.24 10.9 0.1 1.9 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO BA14K PF07886.6 gi|452208639|ref|YP_007488753.1| - 0.16 11.6 1.0 0.16 11.6 0.7 1.8 2 0 0 2 2 2 0 BA14K-like protein Zn-ribbon_8 PF09723.5 gi|452208639|ref|YP_007488753.1| - 0.37 10.7 2.5 0.53 10.2 1.7 1.2 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_4 PF13717.1 gi|452208639|ref|YP_007488753.1| - 0.98 9.1 3.2 4 7.2 2.2 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-trcl PF13451.1 gi|452208639|ref|YP_007488753.1| - 6.2 6.5 6.1 5.6 6.6 0.4 2.2 1 1 1 2 2 2 0 Probable zinc-binding domain eIF-1a PF01176.14 gi|452208640|ref|YP_007488754.1| - 1.1e-12 47.1 0.9 1.3e-12 46.9 0.6 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1317 PF07026.6 gi|452208640|ref|YP_007488754.1| - 0.13 12.1 0.1 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) Methyltransf_11 PF08241.7 gi|452208641|ref|YP_007488755.1| - 1.7e-20 73.3 0.0 2.9e-19 69.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452208641|ref|YP_007488755.1| - 3.8e-19 68.7 0.0 1.6e-18 66.7 0.0 1.8 1 1 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452208641|ref|YP_007488755.1| - 7.1e-18 64.5 0.0 1.3e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|452208641|ref|YP_007488755.1| - 1.4e-14 54.3 0.0 5.1e-14 52.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452208641|ref|YP_007488755.1| - 5.2e-14 52.7 0.0 3.1e-13 50.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452208641|ref|YP_007488755.1| - 5.3e-14 52.2 0.0 8.9e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452208641|ref|YP_007488755.1| - 5.4e-13 49.1 0.0 1.7e-11 44.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452208641|ref|YP_007488755.1| - 4.5e-08 33.1 0.0 9.7e-08 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452208641|ref|YP_007488755.1| - 1e-06 28.4 0.0 1.7e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.9 gi|452208641|ref|YP_007488755.1| - 5e-05 22.7 0.0 0.00016 21.1 0.0 1.8 2 1 1 3 3 3 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|452208641|ref|YP_007488755.1| - 7.3e-05 21.9 0.0 0.00018 20.6 0.0 1.7 1 1 0 1 1 1 1 Putative methyltransferase CMAS PF02353.15 gi|452208641|ref|YP_007488755.1| - 0.00026 20.1 0.0 0.00036 19.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.5 gi|452208641|ref|YP_007488755.1| - 0.0037 16.7 0.0 0.0062 16.0 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_8 PF05148.10 gi|452208641|ref|YP_007488755.1| - 0.0056 16.3 0.0 0.11 12.1 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_3 PF01596.12 gi|452208641|ref|YP_007488755.1| - 0.012 14.6 0.0 0.019 14.0 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Pox_MCEL PF03291.11 gi|452208641|ref|YP_007488755.1| - 0.08 11.7 0.0 1.2 7.9 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme Methyltransf_24 PF13578.1 gi|452208641|ref|YP_007488755.1| - 0.093 13.5 0.0 0.19 12.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF3419 PF11899.3 gi|452208641|ref|YP_007488755.1| - 0.1 11.3 0.0 0.19 10.4 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3419) PrmA PF06325.8 gi|452208641|ref|YP_007488755.1| - 0.11 11.6 0.0 0.23 10.5 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DZR PF12773.2 gi|452208642|ref|YP_007488756.1| - 0.13 12.0 1.0 0.18 11.6 0.7 1.2 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_6 PF14599.1 gi|452208642|ref|YP_007488756.1| - 0.15 11.8 0.9 0.4 10.5 0.7 1.6 1 1 1 2 2 2 0 Zinc-ribbon DNA_RNApol_7kD PF03604.8 gi|452208642|ref|YP_007488756.1| - 0.2 11.1 2.6 0.57 9.6 1.8 1.8 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit AAA_14 PF13173.1 gi|452208643|ref|YP_007488757.1| - 1.7e-38 131.3 0.1 3.9e-38 130.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|452208643|ref|YP_007488757.1| - 1.3e-10 41.3 0.1 2.1e-10 40.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) Arch_ATPase PF01637.13 gi|452208643|ref|YP_007488757.1| - 2.9e-08 33.6 0.6 0.00017 21.4 0.0 2.5 1 1 1 2 2 2 2 Archaeal ATPase AAA_25 PF13481.1 gi|452208643|ref|YP_007488757.1| - 0.0015 17.9 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452208643|ref|YP_007488757.1| - 0.0021 18.8 0.5 0.011 16.5 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452208643|ref|YP_007488757.1| - 0.038 14.1 0.0 1.5 8.9 0.0 2.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|452208643|ref|YP_007488757.1| - 0.069 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain HEAT_2 PF13646.1 gi|452208644|ref|YP_007488758.1| - 3.2e-15 56.1 0.0 0.00074 19.7 0.0 4.0 2 1 3 5 5 5 4 HEAT repeats HEAT PF02985.17 gi|452208644|ref|YP_007488758.1| - 3.4e-10 39.1 0.1 0.16 12.1 0.0 5.1 5 0 0 5 5 5 3 HEAT repeat HEAT_EZ PF13513.1 gi|452208644|ref|YP_007488758.1| - 2.8e-08 33.9 0.0 0.11 13.0 0.0 4.8 5 2 1 6 6 6 2 HEAT-like repeat Adaptin_N PF01602.15 gi|452208644|ref|YP_007488758.1| - 3.3e-06 25.7 0.0 0.00064 18.1 0.0 3.2 1 1 1 2 2 2 1 Adaptin N terminal region ParD PF09386.5 gi|452208644|ref|YP_007488758.1| - 4.8e-06 26.6 4.2 1.8 8.7 0.0 5.8 4 2 2 6 6 6 2 Antitoxin ParD Cnd1 PF12717.2 gi|452208644|ref|YP_007488758.1| - 0.019 14.8 2.6 16 5.2 0.1 4.4 4 1 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 PPP1R35_C PF15503.1 gi|452208644|ref|YP_007488758.1| - 0.059 12.8 0.2 1.3 8.5 0.0 2.8 1 1 2 3 3 3 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DNA_alkylation PF08713.6 gi|452208644|ref|YP_007488758.1| - 0.064 12.7 3.9 0.32 10.4 0.2 2.6 1 1 1 2 2 2 0 DNA alkylation repair enzyme P4Ha_N PF08336.6 gi|452208644|ref|YP_007488758.1| - 1.5 8.6 6.7 2.7 7.8 0.0 3.6 4 0 0 4 4 4 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region zinc_ribbon_6 PF14599.1 gi|452208645|ref|YP_007488759.1| - 0.0097 15.6 0.9 0.021 14.6 0.6 1.6 1 1 0 1 1 1 1 Zinc-ribbon DZR PF12773.2 gi|452208645|ref|YP_007488759.1| - 0.065 13.0 0.6 0.09 12.6 0.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|452208645|ref|YP_007488759.1| - 0.11 11.9 2.0 0.33 10.4 1.4 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Lar_restr_allev PF14354.1 gi|452208645|ref|YP_007488759.1| - 0.19 12.0 1.5 0.65 10.3 1.1 1.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-trcl PF13451.1 gi|452208645|ref|YP_007488759.1| - 7.3 6.3 6.9 6.4 6.4 0.3 2.2 1 1 1 2 2 2 0 Probable zinc-binding domain UPF0150 PF03681.10 gi|452208646|ref|YP_007488760.1| - 6.2e-20 70.5 0.3 6.2e-20 70.5 0.2 1.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|452208646|ref|YP_007488760.1| - 0.0065 15.9 0.0 0.0092 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) Jag_N PF14804.1 gi|452208646|ref|YP_007488760.1| - 0.39 10.7 2.2 7.4 6.6 1.5 2.3 1 1 0 1 1 1 0 Jag N-terminus YcfA PF07927.7 gi|452208647|ref|YP_007488761.1| - 2e-13 50.0 0.4 2.3e-13 49.8 0.3 1.1 1 0 0 1 1 1 1 YcfA-like protein Osmo_CC PF08946.5 gi|452208649|ref|YP_007488763.1| - 0.00091 19.2 3.0 0.0017 18.3 2.1 1.4 1 0 0 1 1 1 1 Osmosensory transporter coiled coil Staph_haemo PF05480.6 gi|452208649|ref|YP_007488763.1| - 0.069 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Staphylococcus haemolytic protein Cir_N PF10197.4 gi|452208649|ref|YP_007488763.1| - 0.073 13.1 3.0 0.21 11.6 0.8 2.2 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR GnsAB PF08178.6 gi|452208649|ref|YP_007488763.1| - 0.12 11.9 0.3 0.24 11.0 0.0 1.6 2 0 0 2 2 2 0 GnsA/GnsB family CD36 PF01130.16 gi|452208650|ref|YP_007488764.1| - 0.051 11.8 0.1 0.064 11.5 0.0 1.1 1 0 0 1 1 1 0 CD36 family DUF234 PF03008.9 gi|452208651|ref|YP_007488765.1| - 0.04 14.0 0.0 0.079 13.0 0.0 1.6 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function HTH_5 PF01022.15 gi|452208651|ref|YP_007488765.1| - 0.051 13.2 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KilA-N PF04383.8 gi|452208651|ref|YP_007488765.1| - 0.096 12.3 0.2 2.1 7.9 0.2 2.4 2 1 0 2 2 2 0 KilA-N domain DUF86 PF01934.12 gi|452208654|ref|YP_007488768.1| - 2.6e-11 43.1 0.0 3.1e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 TOBE_3 PF12857.2 gi|452208655|ref|YP_007488769.1| - 0.14 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 TOBE-like domain UPF0150 PF03681.10 gi|452208656|ref|YP_007488770.1| - 2.6e-20 71.7 0.3 2.6e-20 71.7 0.2 1.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|452208656|ref|YP_007488770.1| - 0.0033 16.9 0.0 0.0038 16.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) Jag_N PF14804.1 gi|452208656|ref|YP_007488770.1| - 0.22 11.5 2.5 2.6 8.1 0.1 2.3 1 1 1 2 2 2 0 Jag N-terminus YcfA PF07927.7 gi|452208657|ref|YP_007488771.1| - 1.2e-14 53.9 0.1 1.5e-14 53.6 0.1 1.2 1 0 0 1 1 1 1 YcfA-like protein GYF PF02213.11 gi|452208658|ref|YP_007488772.1| - 0.00099 18.6 1.0 0.0018 17.8 0.7 1.3 1 0 0 1 1 1 1 GYF domain B3 PF02362.16 gi|452208658|ref|YP_007488772.1| - 0.035 13.7 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 B3 DNA binding domain Arginosuc_synth PF00764.14 gi|452208659|ref|YP_007488773.1| - 3.4e-182 605.7 0.1 3.9e-182 605.5 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 gi|452208659|ref|YP_007488773.1| - 5.3e-06 26.1 0.0 8.5e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|452208659|ref|YP_007488773.1| - 0.00023 20.5 0.0 0.0022 17.3 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 gi|452208659|ref|YP_007488773.1| - 0.0039 16.1 0.0 0.0056 15.6 0.0 1.4 1 1 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|452208659|ref|YP_007488773.1| - 0.032 12.8 0.0 0.051 12.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase DUF362 PF04015.7 gi|452208659|ref|YP_007488773.1| - 0.12 11.8 0.0 0.24 10.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF362) CPSase_L_D2 PF02786.12 gi|452208660|ref|YP_007488774.1| - 2.1e-106 353.9 0.7 1.8e-70 236.5 0.1 2.5 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|452208660|ref|YP_007488774.1| - 3.3e-49 165.6 0.1 1.3e-23 83.1 0.0 3.3 3 0 0 3 3 3 2 Carbamoyl-phosphate synthase L chain, N-terminal domain CPSase_L_D3 PF02787.14 gi|452208660|ref|YP_007488774.1| - 2e-46 156.7 0.1 5.2e-46 155.3 0.1 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp_4 PF13535.1 gi|452208660|ref|YP_007488774.1| - 1.7e-37 128.9 0.1 6.1e-19 68.4 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452208660|ref|YP_007488774.1| - 5.4e-26 91.1 0.0 3.3e-13 49.0 0.0 4.0 3 1 0 3 3 3 3 ATP-grasp in the biosynthetic pathway with Ter operon MGS PF02142.17 gi|452208660|ref|YP_007488774.1| - 4.2e-22 77.8 0.3 4.8e-20 71.2 0.0 3.7 4 0 0 4 4 4 1 MGS-like domain ATP-grasp PF02222.17 gi|452208660|ref|YP_007488774.1| - 4.2e-16 58.7 0.1 7.3e-08 31.9 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|452208660|ref|YP_007488774.1| - 6.5e-16 58.3 0.1 8.8e-07 28.5 0.0 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|452208660|ref|YP_007488774.1| - 1.2e-09 38.2 0.4 0.00041 20.2 0.1 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_5 PF13549.1 gi|452208660|ref|YP_007488774.1| - 0.00047 19.4 0.0 0.013 14.7 0.0 2.8 2 0 0 2 2 2 1 ATP-grasp domain Hydrolase PF00702.21 gi|452208660|ref|YP_007488774.1| - 0.0018 18.7 0.0 19 5.5 0.0 4.3 4 0 0 4 4 4 0 haloacid dehalogenase-like hydrolase B12-binding PF02310.14 gi|452208660|ref|YP_007488774.1| - 0.01 15.7 0.0 0.77 9.6 0.0 3.0 2 0 0 2 2 2 0 B12 binding domain Hydrolase_6 PF13344.1 gi|452208660|ref|YP_007488774.1| - 0.037 13.9 0.2 4.1 7.3 0.0 4.4 4 0 0 4 4 4 0 Haloacid dehalogenase-like hydrolase Rrf2 PF02082.15 gi|452208660|ref|YP_007488774.1| - 0.061 13.4 0.2 14 5.8 0.0 3.3 3 0 0 3 3 3 0 Transcriptional regulator HTH_23 PF13384.1 gi|452208660|ref|YP_007488774.1| - 0.1 12.3 0.0 6.6 6.5 0.0 3.2 3 0 0 3 3 3 0 Homeodomain-like domain MerR_1 PF13411.1 gi|452208660|ref|YP_007488774.1| - 0.1 12.3 0.2 3.3 7.5 0.0 3.4 3 0 0 3 3 3 0 MerR HTH family regulatory protein CPSase_sm_chain PF00988.17 gi|452208661|ref|YP_007488775.1| - 1.4e-51 173.3 0.0 2.2e-51 172.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.23 gi|452208661|ref|YP_007488775.1| - 6.6e-41 139.8 0.0 1.1e-40 139.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|452208661|ref|YP_007488775.1| - 9.2e-07 28.5 0.0 0.00025 20.5 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 Glycos_transf_N PF04413.11 gi|452208661|ref|YP_007488775.1| - 0.11 11.6 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) STb_secrete PF09075.5 gi|452208661|ref|YP_007488775.1| - 9 6.2 7.1 5.8 6.8 0.6 3.0 3 0 0 3 3 3 0 Heat-stable enterotoxin B, secretory ABC_tran PF00005.22 gi|452208662|ref|YP_007488776.1| - 3.6e-30 105.0 0.0 7.8e-30 103.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter CBS PF00571.23 gi|452208662|ref|YP_007488776.1| - 4.8e-13 48.6 0.2 1.3e-05 24.9 0.0 2.5 2 0 0 2 2 2 2 CBS domain AAA_21 PF13304.1 gi|452208662|ref|YP_007488776.1| - 8.4e-09 35.7 0.3 5.3e-05 23.3 0.0 2.4 1 1 0 2 2 2 2 AAA domain ABC_ATPase PF09818.4 gi|452208662|ref|YP_007488776.1| - 0.00018 20.2 0.2 0.028 13.0 0.0 3.0 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_22 PF13401.1 gi|452208662|ref|YP_007488776.1| - 0.016 15.3 1.7 0.93 9.6 0.6 3.2 2 1 0 2 2 2 0 AAA domain AAA_15 PF13175.1 gi|452208662|ref|YP_007488776.1| - 0.02 13.9 0.0 2.6 6.9 0.0 2.3 1 1 0 2 2 2 0 AAA ATPase domain AAA_29 PF13555.1 gi|452208662|ref|YP_007488776.1| - 0.03 13.8 0.1 0.057 12.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452208662|ref|YP_007488776.1| - 0.032 14.2 0.6 0.12 12.3 0.4 2.0 1 1 0 1 1 1 0 AAA ATPase domain DUF1758 PF05585.7 gi|452208662|ref|YP_007488776.1| - 0.037 13.5 0.0 0.087 12.3 0.0 1.5 1 0 0 1 1 1 0 Putative peptidase (DUF1758) AAA_18 PF13238.1 gi|452208662|ref|YP_007488776.1| - 0.043 14.1 0.0 1.4 9.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|452208662|ref|YP_007488776.1| - 0.049 13.5 0.8 0.28 11.1 0.5 2.3 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit BPD_transp_1 PF00528.17 gi|452208663|ref|YP_007488777.1| - 6.2e-28 97.5 9.3 6.2e-28 97.5 6.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3464 PF11947.3 gi|452208663|ref|YP_007488777.1| - 7.9 5.9 6.6 3.5 7.0 1.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3464) OpuAC PF04069.7 gi|452208664|ref|YP_007488778.1| - 2.7e-70 236.6 1.6 3.2e-70 236.4 1.1 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NosD PF05048.8 gi|452208665|ref|YP_007488779.1| - 2.5e-57 193.7 34.8 2.5e-57 193.7 24.1 4.9 4 1 1 5 5 5 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452208665|ref|YP_007488779.1| - 5e-23 80.6 12.6 4.1e-12 45.6 0.9 3.1 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|452208665|ref|YP_007488779.1| - 8e-23 80.9 108.6 9e-13 48.2 25.9 5.2 3 1 2 5 5 5 3 Right handed beta helix region Lactonase PF10282.4 gi|452208665|ref|YP_007488779.1| - 1.4e-12 47.4 6.2 0.00012 21.3 0.0 3.3 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|452208665|ref|YP_007488779.1| - 9e-12 44.8 5.3 5.6e-05 22.6 1.0 3.7 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|452208665|ref|YP_007488779.1| - 1.1e-10 40.9 8.2 0.39 10.7 0.0 6.3 5 0 0 5 5 5 4 NHL repeat Cytochrom_D1 PF02239.11 gi|452208665|ref|YP_007488779.1| - 2.2e-08 32.8 5.9 2.5e-06 26.0 4.1 3.2 1 1 0 1 1 1 1 Cytochrome D1 heme domain Arylesterase PF01731.15 gi|452208665|ref|YP_007488779.1| - 0.00017 21.5 8.2 0.18 11.8 0.1 5.8 3 2 3 6 6 6 1 Arylesterase SBP56 PF05694.6 gi|452208665|ref|YP_007488779.1| - 0.013 14.0 0.1 6.4 5.1 0.0 3.6 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) CPSase_L_chain PF00289.17 gi|452208665|ref|YP_007488779.1| - 0.062 13.4 0.4 2.6 8.1 0.0 3.1 2 1 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain DUF1513 PF07433.6 gi|452208665|ref|YP_007488779.1| - 0.12 11.2 3.1 2.3 7.0 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1513) PQQ_3 PF13570.1 gi|452208665|ref|YP_007488779.1| - 1.1 9.5 29.2 2 8.8 0.2 7.4 6 1 1 7 7 7 0 PQQ-like domain TPR_1 PF00515.23 gi|452208666|ref|YP_007488780.1| - 9.3e-43 142.1 2.4 8.1e-09 34.7 0.0 7.2 5 1 2 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452208666|ref|YP_007488780.1| - 2.4e-36 120.7 3.3 1.3e-07 30.9 0.0 7.2 6 1 1 7 7 7 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452208666|ref|YP_007488780.1| - 4.5e-36 122.3 2.6 4.7e-13 48.5 0.0 5.6 2 2 2 5 5 5 5 TPR repeat TPR_8 PF13181.1 gi|452208666|ref|YP_007488780.1| - 7.7e-28 94.1 1.8 8.3e-05 22.0 0.0 7.1 5 2 2 7 7 7 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452208666|ref|YP_007488780.1| - 1e-22 80.2 0.0 1.3e-06 28.9 0.0 5.1 4 1 2 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452208666|ref|YP_007488780.1| - 3e-22 78.2 0.0 6.3e-11 41.9 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452208666|ref|YP_007488780.1| - 3.7e-21 75.2 0.7 2.7e-07 30.7 0.0 5.2 4 2 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452208666|ref|YP_007488780.1| - 1.9e-20 72.5 2.1 6.9e-05 22.7 0.0 6.1 3 3 3 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452208666|ref|YP_007488780.1| - 3.4e-20 70.7 0.2 0.0034 17.8 0.0 6.6 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452208666|ref|YP_007488780.1| - 1.7e-17 62.0 0.1 0.0076 16.3 0.0 7.0 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452208666|ref|YP_007488780.1| - 2.2e-14 52.0 0.0 0.17 11.7 0.0 7.0 8 0 0 8 8 7 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452208666|ref|YP_007488780.1| - 3.5e-13 49.0 0.7 0.31 11.6 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452208666|ref|YP_007488780.1| - 2.1e-12 47.0 0.6 0.0022 18.0 0.0 4.2 2 2 2 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|452208666|ref|YP_007488780.1| - 2.7e-09 36.7 0.2 0.041 13.7 0.0 5.1 6 0 0 6 6 5 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|452208666|ref|YP_007488780.1| - 1.1e-08 34.7 0.5 0.51 10.3 0.0 5.5 5 1 1 6 6 5 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|452208666|ref|YP_007488780.1| - 2.6e-07 29.8 0.0 0.038 12.7 0.0 3.9 3 1 0 4 4 4 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|452208666|ref|YP_007488780.1| - 3.8e-07 29.4 0.1 0.021 13.8 0.0 4.4 2 2 3 5 5 5 2 Tetratricopeptide repeat RPN7 PF10602.4 gi|452208666|ref|YP_007488780.1| - 0.00017 20.9 0.5 1.1 8.5 0.1 4.0 2 2 2 4 4 4 1 26S proteasome subunit RPN7 MIT PF04212.13 gi|452208666|ref|YP_007488780.1| - 0.00067 19.4 2.6 6.1 6.8 0.0 5.0 4 1 1 5 5 5 1 MIT (microtubule interacting and transport) domain TPR_4 PF07721.9 gi|452208666|ref|YP_007488780.1| - 0.0023 18.1 0.0 3.8 8.2 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat DUF3856 PF12968.2 gi|452208666|ref|YP_007488780.1| - 0.0042 16.9 1.5 3.6 7.3 0.5 4.4 3 1 1 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_21 PF09976.4 gi|452208666|ref|YP_007488780.1| - 0.015 15.2 0.0 26 4.7 0.1 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|452208666|ref|YP_007488780.1| - 0.11 11.6 0.0 1.5 7.8 0.0 2.6 3 0 0 3 3 3 0 Coatomer epsilon subunit PPR PF01535.15 gi|452208666|ref|YP_007488780.1| - 0.3 11.1 0.0 0.3 11.1 0.0 5.8 7 1 1 8 8 5 0 PPR repeat Ank_2 PF12796.2 gi|452208667|ref|YP_007488781.1| - 1.7e-96 316.7 21.3 1.5e-16 60.5 0.0 4.9 1 1 6 7 7 7 7 Ankyrin repeats (3 copies) Ank PF00023.25 gi|452208667|ref|YP_007488781.1| - 3e-62 203.4 11.5 9.5e-09 34.6 0.2 9.1 9 0 0 9 9 9 8 Ankyrin repeat Ank_5 PF13857.1 gi|452208667|ref|YP_007488781.1| - 2.7e-56 186.3 20.2 3.7e-11 42.8 0.0 6.2 1 1 5 7 7 7 7 Ankyrin repeats (many copies) Ank_4 PF13637.1 gi|452208667|ref|YP_007488781.1| - 3.7e-51 170.6 9.7 7.3e-09 35.9 0.3 8.2 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_3 PF13606.1 gi|452208667|ref|YP_007488781.1| - 1.7e-40 132.9 8.1 1.9e-05 24.4 0.0 9.0 9 0 0 9 9 9 7 Ankyrin repeat DUF3107 PF11305.3 gi|452208667|ref|YP_007488781.1| - 5.5e-08 32.5 7.1 1.1 9.1 0.1 6.4 1 1 6 7 7 7 4 Protein of unknown function (DUF3107) Shigella_OspC PF06128.6 gi|452208667|ref|YP_007488781.1| - 0.069 12.6 9.2 8.8 5.7 0.7 4.8 1 1 3 5 5 5 0 Shigella flexneri OspC protein PurS PF02700.9 gi|452208667|ref|YP_007488781.1| - 0.27 11.2 2.1 44 4.1 0.0 3.6 4 0 0 4 4 4 0 Phosphoribosylformylglycinamidine (FGAM) synthase Aminotran_3 PF00202.16 gi|452208670|ref|YP_007488784.1| - 2.1e-102 342.4 0.0 2.5e-102 342.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aldedh PF00171.17 gi|452208671|ref|YP_007488785.1| - 2e-179 596.7 0.0 2.5e-179 596.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|452208671|ref|YP_007488785.1| - 0.0022 16.7 0.0 0.006 15.3 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.6 gi|452208671|ref|YP_007488785.1| - 0.055 12.6 0.0 2 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) Response_reg PF00072.19 gi|452208672|ref|YP_007488786.1| - 4.7e-14 52.3 0.0 5.5e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain GatB_N PF02934.10 gi|452208673|ref|YP_007488787.1| - 4e-76 255.6 0.1 5.4e-76 255.2 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|452208673|ref|YP_007488787.1| - 4.2e-23 81.7 0.1 8.6e-23 80.6 0.1 1.6 1 0 0 1 1 1 1 GatB domain GAD PF02938.9 gi|452208673|ref|YP_007488787.1| - 4.6e-15 55.5 0.5 1.8e-14 53.6 0.0 2.1 2 0 0 2 2 2 1 GAD domain YqeY PF09424.5 gi|452208673|ref|YP_007488787.1| - 1.7e-05 24.7 0.1 4.6e-05 23.3 0.1 1.8 1 1 0 1 1 1 1 Yqey-like protein DUF2999 PF11212.3 gi|452208673|ref|YP_007488787.1| - 0.023 14.7 0.0 0.27 11.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2999) SnoaL_3 PF13474.1 gi|452208674|ref|YP_007488788.1| - 7e-05 22.8 0.0 7e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.5 gi|452208674|ref|YP_007488788.1| - 0.067 13.0 0.0 0.073 12.9 0.0 1.1 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II Association Usp PF00582.21 gi|452208676|ref|YP_007488790.1| - 2.8e-34 118.3 0.2 3.2e-34 118.1 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family PGM_PMM_I PF02878.11 gi|452208676|ref|YP_007488790.1| - 0.0026 17.2 0.0 0.0041 16.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fer4_7 PF12838.2 gi|452208677|ref|YP_007488791.1| - 7.3e-29 99.9 70.1 1.3e-10 41.5 5.6 5.6 4 2 0 5 5 5 4 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452208677|ref|YP_007488791.1| - 6.9e-27 91.9 92.9 2.7e-07 29.8 1.7 9.0 10 0 0 10 10 8 8 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208677|ref|YP_007488791.1| - 4.5e-21 74.3 72.3 1.4e-06 28.0 6.9 6.6 4 2 3 7 7 7 6 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452208677|ref|YP_007488791.1| - 6.1e-20 71.2 75.3 5.7e-07 29.6 5.4 6.9 2 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208677|ref|YP_007488791.1| - 2.2e-18 66.7 68.7 9.9e-05 23.0 4.3 7.9 5 3 2 7 7 7 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452208677|ref|YP_007488791.1| - 5.7e-18 64.5 69.4 9.8e-05 22.1 5.4 6.9 6 1 1 7 7 6 6 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208677|ref|YP_007488791.1| - 1.6e-17 62.2 79.1 0.00024 20.8 1.7 9.3 9 0 0 9 9 9 7 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452208677|ref|YP_007488791.1| - 3.3e-16 58.3 86.2 7.2e-06 25.6 1.6 9.0 9 1 0 9 9 8 8 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452208677|ref|YP_007488791.1| - 2e-12 46.9 72.4 1.2e-05 25.2 7.6 6.4 2 2 6 8 8 8 7 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452208677|ref|YP_007488791.1| - 3.3e-07 30.5 67.1 0.006 16.9 7.0 8.3 5 1 5 10 10 9 6 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452208677|ref|YP_007488791.1| - 3.4e-06 27.5 58.0 0.068 13.7 0.5 8.9 9 0 0 9 9 9 6 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|452208677|ref|YP_007488791.1| - 0.00014 22.2 58.1 0.072 13.5 0.1 8.7 9 0 0 9 9 8 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452208677|ref|YP_007488791.1| - 0.0011 19.1 89.7 0.015 15.6 2.3 9.4 9 0 0 9 9 9 4 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452208677|ref|YP_007488791.1| - 0.0027 17.5 44.4 0.021 14.6 9.4 5.8 2 2 1 4 4 4 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452208677|ref|YP_007488791.1| - 0.037 14.5 5.9 0.037 14.5 4.1 9.8 10 0 0 10 10 9 0 4Fe-4S binding domain FlpD PF02662.11 gi|452208678|ref|YP_007488792.1| - 2.7e-49 165.9 4.8 4.3e-49 165.3 0.1 3.3 4 0 0 4 4 4 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4_7 PF12838.2 gi|452208678|ref|YP_007488792.1| - 2.4e-14 53.4 50.0 2.5e-09 37.3 8.8 5.3 3 2 4 7 7 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452208678|ref|YP_007488792.1| - 6.1e-14 51.1 58.1 7.3e-06 25.6 2.8 6.7 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4 PF00037.22 gi|452208678|ref|YP_007488792.1| - 7.6e-14 50.6 57.4 9.6e-07 28.1 2.4 6.2 6 1 0 6 6 5 3 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208678|ref|YP_007488792.1| - 3.5e-13 49.1 38.6 5.8e-07 29.2 8.5 5.0 4 1 2 6 6 5 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208678|ref|YP_007488792.1| - 1e-12 47.1 46.9 6.6e-06 25.7 1.8 5.9 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452208678|ref|YP_007488792.1| - 1.5e-12 47.1 49.5 5.6e-08 32.5 8.0 5.8 7 0 0 7 7 5 3 4Fe-4S dicluster domain Pyr_redox_2 PF07992.9 gi|452208678|ref|YP_007488792.1| - 7.5e-11 42.2 4.1 1.1e-08 35.2 2.8 3.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_9 PF13187.1 gi|452208678|ref|YP_007488792.1| - 7.5e-11 42.1 42.0 3.1e-07 30.5 8.6 5.3 4 1 2 6 6 6 4 4Fe-4S dicluster domain DAO PF01266.19 gi|452208678|ref|YP_007488792.1| - 8.9e-09 34.6 1.1 7.3e-06 25.1 0.4 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_15 PF13459.1 gi|452208678|ref|YP_007488792.1| - 1.1e-07 32.3 22.6 0.024 15.1 0.5 5.0 4 0 0 4 4 4 3 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452208678|ref|YP_007488792.1| - 1.1e-07 32.4 34.3 0.0047 17.6 5.8 5.2 6 0 0 6 6 4 3 4Fe-4S double cluster binding domain Pyr_redox PF00070.22 gi|452208678|ref|YP_007488792.1| - 7.1e-07 29.5 0.7 1.5e-05 25.2 0.5 2.8 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_17 PF13534.1 gi|452208678|ref|YP_007488792.1| - 8.5e-07 29.2 32.3 0.0011 19.2 3.1 4.6 4 1 0 4 4 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452208678|ref|YP_007488792.1| - 1.7e-06 27.9 40.7 0.00023 21.1 8.0 5.0 2 2 4 6 6 6 4 4Fe-4S dicluster domain FAD_binding_2 PF00890.19 gi|452208678|ref|YP_007488792.1| - 2e-06 26.9 0.9 4.4e-06 25.8 0.6 1.5 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.17 gi|452208678|ref|YP_007488792.1| - 3.3e-06 26.2 0.4 1e-05 24.6 0.2 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|452208678|ref|YP_007488792.1| - 3.7e-06 26.8 0.0 9e-06 25.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.2 gi|452208678|ref|YP_007488792.1| - 1e-05 24.8 0.2 1.7e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|452208678|ref|YP_007488792.1| - 1.9e-05 24.7 1.1 0.00037 20.6 0.2 2.7 2 1 1 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|452208678|ref|YP_007488792.1| - 9.2e-05 21.6 0.7 0.00015 20.9 0.5 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|452208678|ref|YP_007488792.1| - 0.00012 20.7 0.5 0.00036 19.1 0.5 1.6 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|452208678|ref|YP_007488792.1| - 0.00024 20.2 0.0 0.00054 19.1 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Fer4_13 PF13370.1 gi|452208678|ref|YP_007488792.1| - 0.0022 18.3 29.3 0.19 12.1 1.3 4.7 4 0 0 4 4 4 3 4Fe-4S single cluster domain K_oxygenase PF13434.1 gi|452208678|ref|YP_007488792.1| - 0.0055 15.6 0.2 3 6.6 0.0 2.8 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Amino_oxidase PF01593.19 gi|452208678|ref|YP_007488792.1| - 0.007 15.4 0.1 0.017 14.2 0.0 1.6 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.1 gi|452208678|ref|YP_007488792.1| - 0.0078 16.4 0.2 0.055 13.7 0.0 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.16 gi|452208678|ref|YP_007488792.1| - 0.014 14.9 0.1 0.031 13.8 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_4 PF12800.2 gi|452208678|ref|YP_007488792.1| - 0.014 15.6 3.5 0.014 15.6 2.4 5.9 7 0 0 7 7 4 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452208678|ref|YP_007488792.1| - 0.018 14.9 23.6 0.035 14.0 1.2 3.9 3 1 0 3 3 3 0 4Fe-4S dicluster domain NAD_binding_9 PF13454.1 gi|452208678|ref|YP_007488792.1| - 0.022 14.5 0.1 2.6 7.8 0.0 2.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.13 gi|452208678|ref|YP_007488792.1| - 0.024 14.2 0.5 0.051 13.2 0.4 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Response_reg PF00072.19 gi|452208678|ref|YP_007488792.1| - 0.11 12.5 0.0 2.8 7.9 0.0 2.6 2 0 0 2 2 2 0 Response regulator receiver domain Lycopene_cycl PF05834.7 gi|452208678|ref|YP_007488792.1| - 0.12 11.2 0.3 0.4 9.5 0.3 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.9 gi|452208678|ref|YP_007488792.1| - 0.13 10.9 1.7 0.28 9.7 0.5 1.8 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_3 PF12798.2 gi|452208678|ref|YP_007488792.1| - 0.14 12.7 67.6 0.078 13.5 2.4 7.1 7 0 0 7 7 5 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452208678|ref|YP_007488792.1| - 0.16 12.4 45.9 0.23 11.8 2.7 5.8 5 1 1 6 6 5 0 4Fe-4S dicluster domain FeThRed_B PF02943.10 gi|452208680|ref|YP_007488794.1| - 3.1e-23 81.5 1.4 3.6e-23 81.3 1.0 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain FeS PF04060.8 gi|452208682|ref|YP_007488796.1| - 6.1e-14 51.3 2.2 6.1e-14 51.3 1.5 2.5 3 0 0 3 3 3 1 Putative Fe-S cluster Fer4_7 PF12838.2 gi|452208682|ref|YP_007488796.1| - 1.4e-06 28.5 12.3 0.00029 21.1 4.1 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452208682|ref|YP_007488796.1| - 2e-06 27.1 22.2 8.2e-06 25.2 2.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452208682|ref|YP_007488796.1| - 3.5e-06 27.1 23.4 0.00017 21.7 2.9 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452208682|ref|YP_007488796.1| - 0.00017 21.4 11.9 0.0028 17.4 0.4 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208682|ref|YP_007488796.1| - 0.00017 21.3 2.5 0.00017 21.3 1.7 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452208682|ref|YP_007488796.1| - 0.00073 19.6 1.7 0.00073 19.6 1.2 3.5 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452208682|ref|YP_007488796.1| - 0.00094 19.1 12.4 0.0039 17.1 4.5 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452208682|ref|YP_007488796.1| - 0.0021 18.5 0.2 0.0021 18.5 0.1 2.9 3 1 0 3 3 3 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452208682|ref|YP_007488796.1| - 0.0024 18.1 4.4 0.0024 18.1 3.0 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain YhfH PF14149.1 gi|452208682|ref|YP_007488796.1| - 0.0051 16.5 2.1 0.0051 16.5 1.4 2.3 2 0 0 2 2 1 1 YhfH-like protein Fer4_6 PF12837.2 gi|452208682|ref|YP_007488796.1| - 0.0067 16.2 3.7 0.0067 16.2 2.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208682|ref|YP_007488796.1| - 0.014 15.1 10.1 0.014 15.1 7.0 3.3 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208682|ref|YP_007488796.1| - 0.031 15.0 16.7 1.1 10.0 0.3 2.9 2 1 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|452208682|ref|YP_007488796.1| - 0.37 11.4 24.7 0.25 11.9 1.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452208682|ref|YP_007488796.1| - 0.4 10.5 9.2 1.1 9.2 3.5 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452208682|ref|YP_007488796.1| - 0.46 10.9 15.4 2.2 8.7 5.9 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452208682|ref|YP_007488796.1| - 2.7 8.4 14.4 3.6 8.0 5.4 3.1 2 1 0 2 2 2 0 4Fe-4S single cluster domain TPP_enzyme_M PF00205.17 gi|452208683|ref|YP_007488797.1| - 6.9e-07 29.1 0.5 0.0011 18.6 0.0 3.3 3 1 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|452208683|ref|YP_007488797.1| - 0.049 13.1 0.0 0.11 12.0 0.0 1.6 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Molydop_binding PF01568.16 gi|452208684|ref|YP_007488798.1| - 2.4e-14 53.0 0.0 3.6e-14 52.5 0.0 1.3 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.13 gi|452208684|ref|YP_007488798.1| - 0.017 15.0 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain NosD PF05048.8 gi|452208686|ref|YP_007488800.1| - 5.8e-79 264.5 55.5 2.9e-61 206.6 23.2 2.5 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452208686|ref|YP_007488800.1| - 6.5e-23 81.2 30.0 6.5e-23 81.2 20.8 2.8 2 1 1 3 3 3 2 Right handed beta helix region PKD PF00801.15 gi|452208686|ref|YP_007488800.1| - 1.2e-08 34.6 0.8 1.2e-08 34.6 0.6 2.3 3 0 0 3 3 3 1 PKD domain VCBS PF13517.1 gi|452208686|ref|YP_007488800.1| - 9.2 6.7 7.4 4.4 7.7 0.3 3.6 3 0 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella NosD PF05048.8 gi|452208687|ref|YP_007488801.1| - 1.8e-105 351.3 144.3 8.2e-55 185.5 29.9 4.4 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452208687|ref|YP_007488801.1| - 2.4e-59 199.6 130.3 2.8e-21 75.9 22.6 5.1 2 1 3 5 5 5 4 Right handed beta helix region Pectate_lyase_3 PF12708.2 gi|452208687|ref|YP_007488801.1| - 0.0067 16.5 14.1 0.0067 16.5 9.7 5.4 1 1 4 5 5 5 4 Pectate lyase superfamily protein NosD PF05048.8 gi|452208688|ref|YP_007488802.1| - 8.7e-86 286.8 163.7 8.4e-47 159.3 36.5 5.6 2 1 4 6 6 6 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452208688|ref|YP_007488802.1| - 3.7e-54 182.7 217.7 2.7e-18 66.2 25.6 5.7 2 1 4 6 6 6 4 Right handed beta helix region PKD PF00801.15 gi|452208688|ref|YP_007488802.1| - 3.1e-23 81.2 17.7 1.7e-14 53.2 3.6 2.8 2 0 0 2 2 2 2 PKD domain DUF1565 PF07602.6 gi|452208688|ref|YP_007488802.1| - 7.6 5.5 107.4 0.24 10.5 11.1 6.7 1 1 4 5 5 5 0 Protein of unknown function (DUF1565) Hist_deacetyl PF00850.14 gi|452208689|ref|YP_007488803.1| - 1.4e-65 221.6 0.0 1.5e-64 218.3 0.0 1.9 1 1 1 2 2 2 1 Histone deacetylase domain Hydantoinase_A PF01968.13 gi|452208690|ref|YP_007488804.1| - 3.1e-68 230.0 8.3 5.7e-64 215.9 2.3 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|452208690|ref|YP_007488804.1| - 2.8e-42 144.1 0.3 1e-38 132.6 0.0 3.0 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region BcrAD_BadFG PF01869.15 gi|452208690|ref|YP_007488804.1| - 3.7e-06 26.4 0.1 0.0017 17.7 0.0 3.7 3 1 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family MutL PF13941.1 gi|452208690|ref|YP_007488804.1| - 8.2e-06 24.4 1.0 0.012 13.9 0.1 2.3 2 0 0 2 2 2 2 MutL protein FtsA PF14450.1 gi|452208690|ref|YP_007488804.1| - 9.3e-05 22.2 4.1 0.063 13.1 0.1 3.3 3 1 0 3 3 3 2 Cell division protein FtsA MreB_Mbl PF06723.8 gi|452208690|ref|YP_007488804.1| - 0.00052 18.7 1.9 0.005 15.4 0.2 2.7 2 0 0 2 2 2 1 MreB/Mbl protein DDR PF08841.5 gi|452208690|ref|YP_007488804.1| - 0.001 17.9 1.9 0.0038 16.1 0.4 2.2 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain EutA PF06277.6 gi|452208690|ref|YP_007488804.1| - 0.0022 16.6 3.3 0.61 8.6 0.0 2.6 3 0 0 3 3 3 2 Ethanolamine utilisation protein EutA Ppx-GppA PF02541.11 gi|452208690|ref|YP_007488804.1| - 0.0078 15.4 1.9 0.068 12.3 0.1 2.5 3 0 0 3 3 3 1 Ppx/GppA phosphatase family StbA PF06406.6 gi|452208690|ref|YP_007488804.1| - 0.012 14.6 1.7 0.28 10.0 0.0 3.0 3 0 0 3 3 3 0 StbA protein DEDD_Tnp_IS110 PF01548.12 gi|452208690|ref|YP_007488804.1| - 0.1 12.2 0.0 0.3 10.7 0.0 1.8 1 0 0 1 1 1 0 Transposase SBF PF01758.11 gi|452208692|ref|YP_007488806.1| - 8.5e-43 145.9 16.0 1.8e-42 144.8 11.1 1.5 1 0 0 1 1 1 1 Sodium Bile acid symporter family DUF4137 PF13593.1 gi|452208692|ref|YP_007488806.1| - 9.2e-18 64.3 19.4 3.4e-17 62.5 13.5 1.8 1 1 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.13 gi|452208692|ref|YP_007488806.1| - 0.26 9.5 17.3 0.012 13.9 5.0 2.7 1 1 3 4 4 4 0 Membrane transport protein S4 PF01479.20 gi|452208693|ref|YP_007488807.1| - 1.9e-12 46.3 0.3 4.7e-12 45.1 0.1 1.8 2 0 0 2 2 2 1 S4 domain Methyltransf_31 PF13847.1 gi|452208693|ref|YP_007488807.1| - 2.5e-09 36.9 0.0 4.5e-09 36.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|452208693|ref|YP_007488807.1| - 1.2e-07 31.8 0.0 2.4e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Fibrillarin PF01269.12 gi|452208693|ref|YP_007488807.1| - 2e-07 30.1 0.0 2.6e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_26 PF13659.1 gi|452208693|ref|YP_007488807.1| - 6.2e-07 29.4 0.0 1.2e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452208693|ref|YP_007488807.1| - 1e-06 29.2 0.0 1.6e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452208693|ref|YP_007488807.1| - 3.4e-05 23.6 0.0 4.9e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452208693|ref|YP_007488807.1| - 7.6e-05 23.1 0.0 0.00017 21.9 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain S4_2 PF13275.1 gi|452208693|ref|YP_007488807.1| - 0.00038 20.0 0.1 0.00075 19.0 0.1 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_24 PF13578.1 gi|452208693|ref|YP_007488807.1| - 0.0026 18.5 0.0 0.0043 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452208693|ref|YP_007488807.1| - 0.016 15.5 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain TPMT PF05724.6 gi|452208693|ref|YP_007488807.1| - 0.16 11.3 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DUF2119 PF09892.4 gi|452208694|ref|YP_007488808.1| - 1.1e-80 269.5 0.0 1.3e-80 269.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) Cpn60_TCP1 PF00118.19 gi|452208695|ref|YP_007488809.1| - 3e-156 520.8 10.9 3.5e-156 520.6 7.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GARS_A PF01071.14 gi|452208695|ref|YP_007488809.1| - 0.0098 15.4 0.8 0.076 12.5 0.2 2.3 1 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DUF2294 PF10057.4 gi|452208695|ref|YP_007488809.1| - 0.05 13.2 0.0 0.14 11.7 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) Rib_5-P_isom_A PF06026.9 gi|452208697|ref|YP_007488811.1| - 1.5e-60 203.4 0.2 2.1e-60 202.9 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|452208697|ref|YP_007488811.1| - 2e-06 27.5 0.6 0.00048 19.8 0.0 2.2 1 1 0 2 2 2 2 DeoR C terminal sensor domain Sugar-bind PF04198.8 gi|452208697|ref|YP_007488811.1| - 0.043 12.7 0.1 0.071 11.9 0.0 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain DUF2478 PF10649.4 gi|452208697|ref|YP_007488811.1| - 0.044 13.1 0.1 0.11 11.7 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2478) tRNA-synt_2 PF00152.15 gi|452208698|ref|YP_007488812.1| - 1.7e-93 313.0 0.3 2.1e-93 312.7 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|452208698|ref|YP_007488812.1| - 8.9e-15 54.3 0.1 1.7e-14 53.4 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|452208698|ref|YP_007488812.1| - 0.00016 20.9 1.4 0.024 13.8 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) Cupredoxin_1 PF13473.1 gi|452208699|ref|YP_007488813.1| - 5.9e-10 38.9 0.0 9.2e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|452208699|ref|YP_007488813.1| - 1.5e-09 38.0 0.8 1e-08 35.2 0.5 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Metallophos_2 PF12850.2 gi|452208701|ref|YP_007488815.1| - 2e-14 53.7 0.1 2.6e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|452208701|ref|YP_007488815.1| - 2e-06 27.3 4.2 1.7e-05 24.2 2.9 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|452208701|ref|YP_007488815.1| - 0.012 14.8 0.0 2.4 7.2 0.0 2.4 2 1 0 2 2 2 0 Metallophosphoesterase, calcineurin superfamily REJ PF02010.10 gi|452208701|ref|YP_007488815.1| - 0.087 11.1 0.0 0.094 11.0 0.0 1.1 1 0 0 1 1 1 0 REJ domain EppA_BapA PF07268.6 gi|452208701|ref|YP_007488815.1| - 0.15 11.6 0.0 4.7 6.8 0.0 2.8 2 1 0 2 2 2 0 Exported protein precursor (EppA/BapA) Pribosyltran PF00156.22 gi|452208702|ref|YP_007488816.1| - 1.7e-09 37.4 0.8 2.2e-09 37.1 0.1 1.5 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Borrelia_lipo_1 PF05714.6 gi|452208703|ref|YP_007488817.1| - 0.15 11.1 2.9 0.4 9.7 0.3 2.1 2 0 0 2 2 2 0 Borrelia burgdorferi virulent strain associated lipoprotein GHL5 PF14872.1 gi|452208704|ref|YP_007488818.1| - 0.02 12.7 0.2 0.13 9.9 0.1 1.9 1 1 1 2 2 2 0 Hypothetical glycoside hydrolase 5 DUF4435 PF14491.1 gi|452208705|ref|YP_007488819.1| - 0.11 12.3 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DUF711 PF05167.7 gi|452208706|ref|YP_007488820.1| - 3.1e-179 595.8 6.8 3.9e-179 595.5 4.7 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) ACT_6 PF13740.1 gi|452208707|ref|YP_007488821.1| - 2.5e-18 65.5 0.3 2.9e-18 65.3 0.2 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|452208707|ref|YP_007488821.1| - 4.7e-10 38.7 0.3 5.7e-10 38.4 0.2 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|452208707|ref|YP_007488821.1| - 1.7e-05 25.0 0.9 2.8e-05 24.3 0.6 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.1 gi|452208707|ref|YP_007488821.1| - 0.005 16.3 0.6 0.0071 15.8 0.4 1.3 1 0 0 1 1 1 1 ACT domain SKI PF01202.17 gi|452208708|ref|YP_007488822.1| - 3.5e-32 111.4 0.0 3.9e-32 111.3 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_17 PF13207.1 gi|452208708|ref|YP_007488822.1| - 2.2e-09 38.1 0.2 4e-09 37.3 0.1 1.5 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|452208708|ref|YP_007488822.1| - 2.1e-07 31.3 0.1 3.6e-07 30.5 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 gi|452208708|ref|YP_007488822.1| - 6.6e-07 29.3 0.1 3e-05 24.0 0.0 2.2 1 1 1 2 2 2 1 Cytidylate kinase-like family AAA_33 PF13671.1 gi|452208708|ref|YP_007488822.1| - 4.7e-05 23.2 0.0 6.1e-05 22.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452208708|ref|YP_007488822.1| - 0.0082 16.3 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.22 gi|452208708|ref|YP_007488822.1| - 0.014 15.6 0.0 0.024 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter APS_kinase PF01583.15 gi|452208708|ref|YP_007488822.1| - 0.023 14.3 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_2 PF07724.9 gi|452208708|ref|YP_007488822.1| - 0.037 13.9 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ATP_bind_2 PF03668.10 gi|452208708|ref|YP_007488822.1| - 0.038 13.0 0.2 0.11 11.5 0.1 1.6 1 1 0 1 1 1 0 P-loop ATPase protein family AAA_22 PF13401.1 gi|452208708|ref|YP_007488822.1| - 0.04 14.0 0.0 0.086 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|452208708|ref|YP_007488822.1| - 0.061 12.1 0.1 0.091 11.5 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain CoaE PF01121.15 gi|452208708|ref|YP_007488822.1| - 0.064 12.6 0.0 0.096 12.0 0.0 1.3 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA_29 PF13555.1 gi|452208708|ref|YP_007488822.1| - 0.081 12.4 0.2 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Thymidylate_kin PF02223.12 gi|452208708|ref|YP_007488822.1| - 0.12 11.7 0.1 0.4 10.0 0.0 1.8 2 0 0 2 2 2 0 Thymidylate kinase Trm56 PF01994.11 gi|452208710|ref|YP_007488824.1| - 3.7e-38 129.9 0.0 6e-38 129.2 0.0 1.3 1 1 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 Baculo_E56 PF04639.7 gi|452208710|ref|YP_007488824.1| - 0.16 10.6 0.0 0.22 10.1 0.0 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope PYNP_C PF07831.8 gi|452208711|ref|YP_007488825.1| - 1.2e-18 66.2 0.1 3e-18 65.0 0.1 1.7 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.16 gi|452208711|ref|YP_007488825.1| - 4.1e-15 55.8 0.2 3.5e-14 52.8 0.1 2.1 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|452208711|ref|YP_007488825.1| - 1.4e-13 50.2 0.0 3e-13 49.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.16 gi|452208711|ref|YP_007488825.1| - 0.00049 19.9 0.0 0.0017 18.1 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Biotin_lipoyl_2 PF13533.1 gi|452208711|ref|YP_007488825.1| - 0.0016 18.0 0.1 0.0054 16.3 0.1 1.9 1 0 0 1 1 1 1 Biotin-lipoyl like Biotin_lipoyl PF00364.17 gi|452208711|ref|YP_007488825.1| - 0.0077 15.8 0.1 0.046 13.3 0.0 2.4 1 0 0 1 1 1 1 Biotin-requiring enzyme CDC48_N PF02359.13 gi|452208711|ref|YP_007488825.1| - 0.018 14.9 0.0 0.049 13.5 0.0 1.7 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain DUF2254 PF10011.4 gi|452208711|ref|YP_007488825.1| - 0.02 13.3 0.1 0.03 12.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) HlyD_3 PF13437.1 gi|452208711|ref|YP_007488825.1| - 0.061 13.6 0.4 0.37 11.1 0.0 2.5 3 0 0 3 3 3 0 HlyD family secretion protein EamA PF00892.15 gi|452208712|ref|YP_007488826.1| - 3.3e-44 149.9 37.3 3.9e-26 91.5 10.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|452208712|ref|YP_007488826.1| - 1.2e-09 38.3 38.4 5.7e-06 26.5 6.3 3.5 2 2 2 4 4 4 2 Multidrug resistance efflux transporter TPT PF03151.11 gi|452208712|ref|YP_007488826.1| - 0.0014 18.3 21.9 0.069 12.8 5.7 2.5 2 1 0 2 2 2 2 Triose-phosphate Transporter family UPF0546 PF10639.4 gi|452208712|ref|YP_007488826.1| - 0.051 13.4 8.2 0.94 9.3 0.3 2.6 2 1 0 2 2 2 0 Uncharacterised protein family UPF0546 TcpE PF12648.2 gi|452208712|ref|YP_007488826.1| - 0.084 13.0 14.3 0.17 12.0 1.3 3.2 2 1 1 3 3 3 0 TcpE family SLAC1 PF03595.12 gi|452208713|ref|YP_007488827.1| - 0.0098 14.5 1.9 0.011 14.4 1.3 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Arteri_Gl PF00951.13 gi|452208713|ref|YP_007488827.1| - 0.013 15.0 1.7 0.013 15.0 1.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2207 PF09972.4 gi|452208713|ref|YP_007488827.1| - 0.016 13.7 2.9 0.017 13.7 2.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) VIT1 PF01988.14 gi|452208713|ref|YP_007488827.1| - 0.018 14.5 2.9 0.019 14.4 2.0 1.0 1 0 0 1 1 1 0 VIT family ABC2_membrane_5 PF13346.1 gi|452208713|ref|YP_007488827.1| - 0.026 13.8 3.9 0.026 13.8 2.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DGF-1_5 PF11038.3 gi|452208713|ref|YP_007488827.1| - 0.045 12.9 0.3 0.045 12.9 0.2 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 HlyIII PF03006.15 gi|452208713|ref|YP_007488827.1| - 0.049 13.0 2.3 0.051 12.9 1.6 1.0 1 0 0 1 1 1 0 Haemolysin-III related DUF3815 PF12821.2 gi|452208713|ref|YP_007488827.1| - 0.083 12.8 2.7 0.1 12.5 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3815) DUF2809 PF10990.3 gi|452208713|ref|YP_007488827.1| - 0.09 13.1 1.9 0.11 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) NfeD PF01957.13 gi|452208713|ref|YP_007488827.1| - 0.15 12.1 5.0 0.16 12.0 3.5 1.0 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF983 PF06170.7 gi|452208713|ref|YP_007488827.1| - 0.18 11.9 2.2 0.2 11.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF983) SUR7 PF06687.7 gi|452208713|ref|YP_007488827.1| - 0.19 11.3 2.2 0.19 11.2 1.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family ABC2_membrane_3 PF12698.2 gi|452208713|ref|YP_007488827.1| - 0.2 10.6 5.4 0.21 10.5 3.8 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF161 PF02588.10 gi|452208713|ref|YP_007488827.1| - 0.26 11.5 3.6 0.36 11.1 2.5 1.3 1 0 0 1 1 1 0 Uncharacterized BCR, YitT family COG1284 RseC_MucC PF04246.7 gi|452208713|ref|YP_007488827.1| - 0.26 10.8 3.3 0.28 10.7 2.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1129 PF06570.6 gi|452208713|ref|YP_007488827.1| - 0.28 10.4 2.3 0.31 10.3 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF1469 PF07332.6 gi|452208713|ref|YP_007488827.1| - 0.36 10.5 4.1 0.42 10.3 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) SdpI PF13630.1 gi|452208713|ref|YP_007488827.1| - 0.64 9.7 8.0 0.79 9.4 5.5 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF2975 PF11188.3 gi|452208713|ref|YP_007488827.1| - 0.85 9.3 5.7 1 9.0 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Tetraspannin PF00335.15 gi|452208713|ref|YP_007488827.1| - 0.91 8.7 4.4 1 8.6 3.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Internalin_N PF12354.3 gi|452208713|ref|YP_007488827.1| - 1.8 8.2 4.7 0.76 9.4 0.3 2.0 2 0 0 2 2 2 0 Bacterial adhesion/invasion protein N terminal DUF2681 PF10883.3 gi|452208713|ref|YP_007488827.1| - 2 8.6 6.1 2.7 8.2 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) PrgI PF12666.2 gi|452208713|ref|YP_007488827.1| - 2.5 8.3 5.7 3.7 7.7 4.0 1.3 1 0 0 1 1 1 0 PrgI family protein DUF4229 PF14012.1 gi|452208713|ref|YP_007488827.1| - 4.7 7.1 7.6 6.3 6.7 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) MacB_PCD PF12704.2 gi|452208715|ref|YP_007488829.1| - 4.8e-31 108.1 0.3 4.8e-31 108.1 0.2 2.2 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452208715|ref|YP_007488829.1| - 2.3e-16 59.6 14.4 2.3e-16 59.6 10.0 2.1 2 0 0 2 2 2 1 FtsX-like permease family Glyco_hydro_2 PF00703.16 gi|452208716|ref|YP_007488830.1| - 0.033 14.6 0.6 2 8.9 0.0 2.7 2 1 0 2 2 2 0 Glycosyl hydrolases family 2 DUF3324 PF11797.3 gi|452208716|ref|YP_007488830.1| - 0.12 12.1 0.0 15 5.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) GATase_3 PF07685.9 gi|452208717|ref|YP_007488831.1| - 3.2e-43 147.0 0.1 5.4e-43 146.3 0.1 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|452208717|ref|YP_007488831.1| - 2.9e-25 88.8 0.0 4.7e-25 88.1 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|452208717|ref|YP_007488831.1| - 6.5e-19 68.3 0.0 1.5e-18 67.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain GATase PF00117.23 gi|452208717|ref|YP_007488831.1| - 8.4e-07 28.6 0.1 3e-06 26.8 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase class-I SNO PF01174.14 gi|452208717|ref|YP_007488831.1| - 0.0039 16.8 0.0 0.0074 15.9 0.0 1.5 1 0 0 1 1 1 1 SNO glutamine amidotransferase family MobB PF03205.9 gi|452208717|ref|YP_007488831.1| - 0.025 14.2 0.0 0.097 12.3 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B OCD_Mu_crystall PF02423.10 gi|452208718|ref|YP_007488832.1| - 4.8e-108 360.6 0.1 5.4e-108 360.4 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.15 gi|452208718|ref|YP_007488832.1| - 5.8e-07 29.6 0.0 1.1e-06 28.8 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Sec34 PF04136.10 gi|452208718|ref|YP_007488832.1| - 0.025 14.3 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Sec34-like family F420_oxidored PF03807.12 gi|452208718|ref|YP_007488832.1| - 0.032 14.6 0.0 0.066 13.6 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.14 gi|452208718|ref|YP_007488832.1| - 0.071 12.1 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF434 PF04256.7 gi|452208719|ref|YP_007488833.1| - 1.2e-19 69.4 0.0 2e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF434) DUF4219 PF13961.1 gi|452208720|ref|YP_007488834.1| - 0.0093 15.3 2.4 0.031 13.7 1.6 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4219) YozD PF14162.1 gi|452208720|ref|YP_007488834.1| - 0.066 13.2 0.2 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 YozD-like protein Metallophos PF00149.23 gi|452208721|ref|YP_007488835.1| - 2.1e-24 86.0 1.4 3.5e-23 82.0 1.0 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452208721|ref|YP_007488835.1| - 0.018 14.8 0.0 0.033 14.0 0.0 1.4 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain TPR_11 PF13414.1 gi|452208722|ref|YP_007488836.1| - 2.6e-46 155.1 33.3 8.3e-14 50.9 0.5 6.0 4 1 1 6 6 6 4 TPR repeat TPR_17 PF13431.1 gi|452208722|ref|YP_007488836.1| - 3.2e-40 132.9 21.5 2.5e-05 24.1 0.0 9.5 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452208722|ref|YP_007488836.1| - 1.4e-38 127.7 37.1 2e-06 27.2 0.8 9.4 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452208722|ref|YP_007488836.1| - 1.8e-36 123.9 46.0 5.2e-08 33.3 1.7 6.0 2 1 4 7 7 7 7 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452208722|ref|YP_007488836.1| - 2.8e-30 102.0 20.8 0.0009 19.6 0.1 9.2 1 1 8 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452208722|ref|YP_007488836.1| - 7.1e-30 100.5 21.7 0.00025 20.6 0.5 8.8 8 1 1 9 9 9 8 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452208722|ref|YP_007488836.1| - 3.6e-29 100.9 18.3 3e-08 33.8 0.5 5.7 4 2 2 6 6 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452208722|ref|YP_007488836.1| - 5.8e-27 93.4 33.1 7.1e-11 41.9 0.9 6.3 3 1 4 7 7 6 5 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452208722|ref|YP_007488836.1| - 1.5e-26 90.8 26.5 7e-05 22.2 0.7 8.7 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452208722|ref|YP_007488836.1| - 4.8e-13 47.8 22.7 0.038 13.7 0.3 8.2 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_15 PF13429.1 gi|452208722|ref|YP_007488836.1| - 6.7e-10 38.4 5.8 6.4e-05 22.1 1.0 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_4 PF07721.9 gi|452208722|ref|YP_007488836.1| - 8.3e-10 38.1 7.0 0.35 11.4 0.3 6.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452208722|ref|YP_007488836.1| - 6.2e-08 32.3 11.6 0.024 14.4 0.1 4.9 2 1 1 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452208722|ref|YP_007488836.1| - 2.6e-05 24.2 17.3 0.03 14.4 0.1 4.6 2 1 4 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|452208722|ref|YP_007488836.1| - 3.8e-05 23.4 26.1 2.1 8.3 0.7 7.4 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452208722|ref|YP_007488836.1| - 6.6e-05 23.1 15.0 9.3 6.9 0.0 7.7 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452208722|ref|YP_007488836.1| - 0.00021 21.3 4.9 0.091 12.8 0.1 3.7 1 1 3 4 4 4 2 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|452208722|ref|YP_007488836.1| - 0.00025 20.1 0.6 0.76 9.0 0.0 2.9 3 0 0 3 3 2 2 SHNi-TPR Coatomer_E PF04733.9 gi|452208722|ref|YP_007488836.1| - 0.0033 16.6 4.6 0.019 14.1 0.0 3.4 4 1 1 5 5 5 1 Coatomer epsilon subunit DUF627 PF04781.7 gi|452208722|ref|YP_007488836.1| - 0.016 14.8 0.4 5.2 6.7 0.1 4.1 2 2 2 4 4 4 0 Protein of unknown function (DUF627) NARP1 PF12569.3 gi|452208722|ref|YP_007488836.1| - 0.03 13.0 10.3 1.3 7.6 0.2 4.1 1 1 2 4 4 4 0 NMDA receptor-regulated protein 1 TPPII_N PF12583.3 gi|452208722|ref|YP_007488836.1| - 0.03 14.4 0.9 0.61 10.2 0.1 2.9 1 1 0 2 2 2 0 Tripeptidyl peptidase II N terminal BTAD PF03704.12 gi|452208722|ref|YP_007488836.1| - 0.17 12.2 15.3 2.6 8.3 1.1 4.4 2 2 3 5 5 5 0 Bacterial transcriptional activator domain TPR_21 PF09976.4 gi|452208722|ref|YP_007488836.1| - 0.26 11.1 5.8 57 3.6 0.2 4.5 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_3 PF07720.7 gi|452208722|ref|YP_007488836.1| - 2.6 7.9 0.0 2.6 7.9 0.0 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat Gly-zipper_YMGG PF13441.1 gi|452208723|ref|YP_007488837.1| - 0.033 13.6 1.5 0.32 10.5 0.1 2.1 2 0 0 2 2 2 0 YMGG-like Gly-zipper SpoVA PF03862.8 gi|452208723|ref|YP_007488837.1| - 0.072 13.1 3.3 0.1 12.7 2.3 1.2 1 0 0 1 1 1 0 SpoVA protein Gly-zipper_OmpA PF13436.1 gi|452208723|ref|YP_007488837.1| - 0.39 10.3 5.1 1.4 8.6 3.6 1.9 1 1 0 1 1 1 0 Glycine-zipper containing OmpA-like membrane domain DUF2613 PF11021.3 gi|452208723|ref|YP_007488837.1| - 3.4 7.4 10.9 0.15 11.7 1.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) FxsA PF04186.8 gi|452208725|ref|YP_007488839.1| - 8.1e-38 128.7 5.6 1e-37 128.4 3.9 1.0 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein LrgB PF04172.11 gi|452208726|ref|YP_007488840.1| - 9.2e-80 266.8 14.3 1.1e-79 266.6 9.9 1.0 1 0 0 1 1 1 1 LrgB-like family CbtA PF09490.5 gi|452208726|ref|YP_007488840.1| - 0.061 12.6 0.2 0.061 12.6 0.2 1.9 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtA) LrgA PF03788.9 gi|452208727|ref|YP_007488841.1| - 2.5e-28 97.5 6.3 3e-28 97.3 4.4 1.1 1 0 0 1 1 1 1 LrgA family Aminotran_5 PF00266.14 gi|452208728|ref|YP_007488842.1| - 5.6e-87 291.8 0.0 7e-87 291.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|452208728|ref|YP_007488842.1| - 4.6e-08 32.5 0.0 6.4e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|452208728|ref|YP_007488842.1| - 4.7e-06 25.8 0.0 7.6e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.14 gi|452208728|ref|YP_007488842.1| - 0.0011 17.5 0.0 0.0016 16.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.11 gi|452208729|ref|YP_007488843.1| - 5e-44 149.2 0.1 5.6e-44 149.1 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.12 gi|452208729|ref|YP_007488843.1| - 0.0054 16.6 0.2 0.0081 16.0 0.1 1.4 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Phos_pyr_kin PF08543.7 gi|452208729|ref|YP_007488843.1| - 0.079 12.1 0.0 0.098 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase RimK PF08443.6 gi|452208730|ref|YP_007488844.1| - 1.7e-28 99.4 0.0 9.1e-27 93.7 0.0 2.4 2 1 0 2 2 2 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|452208730|ref|YP_007488844.1| - 2.6e-16 59.2 0.0 5.1e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_4 PF13535.1 gi|452208730|ref|YP_007488844.1| - 2.8e-11 43.4 0.0 5.2e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452208730|ref|YP_007488844.1| - 4.1e-09 35.6 0.0 1.2e-08 34.0 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_YheCD PF14398.1 gi|452208730|ref|YP_007488844.1| - 4.7e-06 25.5 0.0 0.00038 19.3 0.0 2.2 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATP-grasp_3 PF02655.9 gi|452208730|ref|YP_007488844.1| - 4.5e-05 23.3 0.0 8e-05 22.5 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|452208730|ref|YP_007488844.1| - 0.017 14.4 0.0 0.067 12.5 0.0 1.9 1 1 1 2 2 2 0 ATP-grasp domain ATP-grasp_5 PF13549.1 gi|452208730|ref|YP_007488844.1| - 0.034 13.3 0.1 0.12 11.5 0.0 1.8 1 1 1 2 2 2 0 ATP-grasp domain PTH2 PF01981.11 gi|452208731|ref|YP_007488845.1| - 5.2e-31 106.7 0.3 6.1e-29 100.0 0.0 2.0 1 1 1 2 2 2 2 Peptidyl-tRNA hydrolase PTH2 SAP PF02037.22 gi|452208731|ref|YP_007488845.1| - 0.016 14.6 0.5 0.9 9.1 0.1 2.6 2 0 0 2 2 2 0 SAP domain Transglut_core PF01841.14 gi|452208732|ref|YP_007488846.1| - 2.3e-06 27.8 0.0 4.5e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily FTZ PF03867.9 gi|452208732|ref|YP_007488846.1| - 0.029 13.6 0.3 0.049 12.8 0.2 1.3 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region TruD PF01142.13 gi|452208733|ref|YP_007488847.1| - 1.9e-113 378.9 0.0 2.1e-113 378.8 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) MatE PF01554.13 gi|452208734|ref|YP_007488848.1| - 4.6e-29 101.1 41.8 5.2e-18 65.1 9.8 2.5 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.1 gi|452208734|ref|YP_007488848.1| - 3.2e-10 40.0 30.0 2.5e-09 37.1 11.0 4.5 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.17 gi|452208735|ref|YP_007488849.1| - 2e-12 46.5 0.0 4.3e-12 45.5 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|452208735|ref|YP_007488849.1| - 1.1e-11 44.8 0.0 1.8e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452208735|ref|YP_007488849.1| - 1.7e-10 40.3 0.0 2.3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.14 gi|452208735|ref|YP_007488849.1| - 5.8e-09 35.7 0.1 1.2e-08 34.7 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|452208735|ref|YP_007488849.1| - 2.3e-05 23.9 0.1 5.9e-05 22.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|452208735|ref|YP_007488849.1| - 0.00043 19.8 0.0 0.00063 19.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|452208735|ref|YP_007488849.1| - 0.001 18.4 0.0 0.0021 17.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|452208735|ref|YP_007488849.1| - 0.0019 18.2 0.0 0.004 17.2 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator DUF387 PF04079.11 gi|452208735|ref|YP_007488849.1| - 0.0071 15.7 0.0 0.012 14.9 0.0 1.6 1 1 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_Crp_2 PF13545.1 gi|452208735|ref|YP_007488849.1| - 0.013 15.2 0.0 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.15 gi|452208735|ref|YP_007488849.1| - 0.014 15.0 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452208735|ref|YP_007488849.1| - 0.022 14.5 0.0 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.7 gi|452208735|ref|YP_007488849.1| - 0.039 13.5 0.4 0.18 11.4 0.0 2.3 4 0 0 4 4 4 0 HTH DNA binding domain HTH_45 PF14947.1 gi|452208735|ref|YP_007488849.1| - 0.057 13.2 0.0 0.12 12.2 0.0 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix FeoC PF09012.5 gi|452208735|ref|YP_007488849.1| - 0.061 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF4013 PF13197.1 gi|452208736|ref|YP_007488850.1| - 5.4e-19 68.1 20.0 3.1e-18 65.6 13.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF4013) AtpR PF12966.2 gi|452208736|ref|YP_007488850.1| - 1.1 9.4 7.1 0.095 12.8 1.2 1.9 2 0 0 2 2 2 0 N-ATPase, AtpR subunit DUF1673 PF07895.6 gi|452208736|ref|YP_007488850.1| - 2.5 7.5 9.3 3.6 7.0 6.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) EFP PF01132.15 gi|452208737|ref|YP_007488851.1| - 0.13 11.9 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain DUF106 PF01956.11 gi|452208737|ref|YP_007488851.1| - 3.4 7.1 5.6 3.4 7.1 3.9 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF106 Herpes_U44 PF04533.8 gi|452208738|ref|YP_007488852.1| - 0.54 9.4 4.0 0.56 9.4 2.8 1.0 1 0 0 1 1 1 0 Herpes virus U44 protein CTP_synth_N PF06418.9 gi|452208739|ref|YP_007488853.1| - 1.1e-127 424.7 2.0 1.7e-127 424.2 1.4 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|452208739|ref|YP_007488853.1| - 2.8e-51 173.7 0.0 5.3e-51 172.8 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.18 gi|452208739|ref|YP_007488853.1| - 3.8e-09 36.2 0.1 7.4e-09 35.2 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.8 gi|452208739|ref|YP_007488853.1| - 1.3e-08 34.5 0.0 6.6e-08 32.2 0.0 2.0 2 0 0 2 2 2 1 Peptidase C26 ArgK PF03308.11 gi|452208739|ref|YP_007488853.1| - 0.039 12.7 0.3 0.11 11.2 0.2 1.7 1 0 0 1 1 1 0 ArgK protein Trm112p PF03966.11 gi|452208741|ref|YP_007488855.1| - 6.7e-13 48.7 0.8 1.1e-12 48.1 0.6 1.3 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.8 gi|452208741|ref|YP_007488855.1| - 0.0018 17.9 0.0 0.0018 17.9 0.0 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Prim_Zn_Ribbon PF08273.7 gi|452208741|ref|YP_007488855.1| - 0.0051 16.8 0.1 0.0083 16.1 0.1 1.4 1 1 0 1 1 1 1 Zinc-binding domain of primase-helicase Cys_rich_KTR PF14205.1 gi|452208741|ref|YP_007488855.1| - 0.0062 15.9 1.9 0.013 14.9 1.3 1.5 1 1 0 1 1 1 1 Cysteine-rich KTR Lar_restr_allev PF14354.1 gi|452208741|ref|YP_007488855.1| - 0.011 15.9 1.2 0.023 14.9 0.9 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.7 gi|452208741|ref|YP_007488855.1| - 0.023 14.0 1.2 2.6 7.4 0.1 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding C1_4 PF07975.7 gi|452208741|ref|YP_007488855.1| - 0.036 14.0 0.2 0.11 12.5 0.2 1.7 1 1 1 2 2 2 0 TFIIH C1-like domain zf-RING_4 PF14570.1 gi|452208741|ref|YP_007488855.1| - 0.036 13.6 0.4 0.89 9.1 0.1 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-TFIIB PF13453.1 gi|452208741|ref|YP_007488855.1| - 0.059 12.5 1.1 2.8 7.1 0.0 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-Di19 PF05605.7 gi|452208741|ref|YP_007488855.1| - 0.068 13.2 2.9 4.1 7.5 0.1 2.1 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Rubredoxin PF00301.15 gi|452208741|ref|YP_007488855.1| - 0.074 12.9 0.5 10 6.0 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin zf-C3HC4_3 PF13920.1 gi|452208741|ref|YP_007488855.1| - 0.091 12.4 2.0 2.8 7.6 1.5 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DRP PF06044.7 gi|452208741|ref|YP_007488855.1| - 0.098 11.6 0.1 0.11 11.5 0.1 1.0 1 0 0 1 1 1 0 Dam-replacing family zf-RING_UBOX PF13445.1 gi|452208741|ref|YP_007488855.1| - 0.11 12.1 1.9 1.1 9.0 0.1 2.1 2 0 0 2 2 2 0 RING-type zinc-finger RRN7 PF11781.3 gi|452208741|ref|YP_007488855.1| - 0.12 11.8 0.6 6.8 6.2 0.0 2.3 2 1 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 CcmH PF03918.9 gi|452208741|ref|YP_007488855.1| - 0.15 11.0 0.2 5.1 6.0 0.0 2.0 1 1 1 2 2 2 0 Cytochrome C biogenesis protein CK_II_beta PF01214.13 gi|452208741|ref|YP_007488855.1| - 0.15 11.5 0.2 0.16 11.4 0.2 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit Prok-RING_4 PF14447.1 gi|452208741|ref|YP_007488855.1| - 0.19 11.2 0.9 5.5 6.6 0.0 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Prok-RING_1 PF14446.1 gi|452208741|ref|YP_007488855.1| - 0.24 11.1 1.4 3.5 7.4 0.1 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF1644 PF07800.7 gi|452208741|ref|YP_007488855.1| - 0.25 11.2 1.3 1.1 9.1 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) NADH-G_4Fe-4S_3 PF10588.4 gi|452208741|ref|YP_007488855.1| - 0.25 10.6 1.8 2.5 7.4 0.1 2.2 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Auto_anti-p27 PF06677.7 gi|452208741|ref|YP_007488855.1| - 0.32 10.7 2.8 1.9 8.3 0.2 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF2387 PF09526.5 gi|452208741|ref|YP_007488855.1| - 0.61 10.0 2.3 5.5 6.9 1.5 1.9 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) Rad50_zn_hook PF04423.9 gi|452208741|ref|YP_007488855.1| - 1.1 8.8 6.7 1.7 8.1 0.4 2.3 1 1 1 2 2 2 0 Rad50 zinc hook motif zf-RING_5 PF14634.1 gi|452208741|ref|YP_007488855.1| - 3.5 7.4 5.2 10 5.9 0.2 2.1 1 1 0 2 2 2 0 zinc-RING finger domain Prismane PF03063.15 gi|452208742|ref|YP_007488856.1| - 3.4e-177 589.9 2.2 3.9e-177 589.7 1.5 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_11 PF13247.1 gi|452208743|ref|YP_007488857.1| - 1.7e-19 69.5 14.3 9.3e-11 41.4 4.2 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452208743|ref|YP_007488857.1| - 4.9e-12 45.4 20.4 3.8e-06 26.5 3.5 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452208743|ref|YP_007488857.1| - 2.7e-11 43.6 28.5 9.8e-06 25.8 8.4 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452208743|ref|YP_007488857.1| - 6.2e-11 41.6 32.8 0.0078 16.0 2.1 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452208743|ref|YP_007488857.1| - 4.5e-10 39.6 26.7 8.4e-05 22.7 6.8 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452208743|ref|YP_007488857.1| - 1.2e-07 31.0 37.8 0.0067 15.9 2.6 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452208743|ref|YP_007488857.1| - 1.5e-06 28.1 24.1 0.0012 18.7 6.5 2.5 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208743|ref|YP_007488857.1| - 0.00024 20.8 38.1 0.00024 20.8 2.3 4.6 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452208743|ref|YP_007488857.1| - 0.00086 19.4 38.1 0.044 14.1 2.9 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452208743|ref|YP_007488857.1| - 0.0011 19.3 4.5 0.0011 19.3 3.1 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452208743|ref|YP_007488857.1| - 0.012 15.8 29.3 1.1 9.6 7.8 3.6 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208743|ref|YP_007488857.1| - 0.021 15.5 31.6 4.3 8.1 1.0 4.6 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452208743|ref|YP_007488857.1| - 0.71 9.7 34.3 1.4 8.8 2.2 4.1 2 2 2 4 4 4 0 4Fe-4S dicluster domain GF_recep_IV PF14843.1 gi|452208743|ref|YP_007488857.1| - 1.1 8.8 25.3 18 4.9 0.2 3.1 2 1 0 2 2 2 0 Growth factor receptor domain IV Fer4_20 PF14691.1 gi|452208743|ref|YP_007488857.1| - 9.1 5.9 23.5 2.5 7.7 0.1 3.6 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Usp PF00582.21 gi|452208744|ref|YP_007488858.1| - 1.3e-34 119.3 0.9 1.5e-34 119.2 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family GARS_N PF02844.10 gi|452208744|ref|YP_007488858.1| - 0.053 13.9 0.0 0.099 13.1 0.0 1.6 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain Gate PF07670.9 gi|452208745|ref|YP_007488859.1| - 2.9e-11 43.2 20.4 2.9e-08 33.5 1.3 3.0 2 2 1 3 3 3 2 Nucleoside recognition Usp PF00582.21 gi|452208746|ref|YP_007488860.1| - 6.6e-26 91.1 0.2 7.1e-26 91.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family FR47 PF08445.5 gi|452208746|ref|YP_007488860.1| - 0.12 12.0 0.0 0.27 11.0 0.0 1.6 2 0 0 2 2 2 0 FR47-like protein PmbA_TldD PF01523.11 gi|452208747|ref|YP_007488861.1| - 6.8e-67 225.8 2.5 1.1e-66 225.0 1.7 1.4 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.11 gi|452208748|ref|YP_007488862.1| - 2.6e-72 243.5 0.7 3.6e-72 243.1 0.5 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Lon_C PF05362.8 gi|452208749|ref|YP_007488863.1| - 1.4e-32 112.6 5.8 2.5e-32 111.8 4.0 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.1 gi|452208749|ref|YP_007488863.1| - 1e-22 80.5 0.1 2.9e-19 69.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|452208749|ref|YP_007488863.1| - 1.9e-16 59.8 1.2 8e-10 38.2 0.6 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|452208749|ref|YP_007488863.1| - 4e-15 55.6 0.3 8.6e-09 35.0 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.1 gi|452208749|ref|YP_007488863.1| - 1.3e-11 44.0 0.6 2.8e-11 42.9 0.4 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|452208749|ref|YP_007488863.1| - 3.5e-11 42.9 0.1 0.00015 21.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|452208749|ref|YP_007488863.1| - 5e-08 32.1 1.0 0.047 12.4 0.0 3.7 4 0 0 4 4 4 2 MCM2/3/5 family AAA PF00004.24 gi|452208749|ref|YP_007488863.1| - 1.4e-07 31.7 0.0 0.0023 18.1 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|452208749|ref|YP_007488863.1| - 3e-06 27.4 0.0 0.001 19.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|452208749|ref|YP_007488863.1| - 5.6e-06 26.0 0.0 1.6e-05 24.5 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain Sigma54_activ_2 PF14532.1 gi|452208749|ref|YP_007488863.1| - 8.3e-05 22.6 0.0 0.57 10.2 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain RuvB_N PF05496.7 gi|452208749|ref|YP_007488863.1| - 0.00022 20.3 0.1 0.04 12.9 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_3 PF07726.6 gi|452208749|ref|YP_007488863.1| - 0.00046 19.7 0.1 0.95 9.0 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|452208749|ref|YP_007488863.1| - 0.0011 19.0 0.2 0.049 13.6 0.0 2.7 3 0 0 3 3 3 1 AAA ATPase domain T2SE PF00437.15 gi|452208749|ref|YP_007488863.1| - 0.0017 17.3 0.0 0.0093 14.8 0.0 2.1 2 0 0 2 2 2 1 Type II/IV secretion system protein PhoH PF02562.11 gi|452208749|ref|YP_007488863.1| - 0.0022 17.2 0.1 0.0066 15.7 0.0 1.8 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.1 gi|452208749|ref|YP_007488863.1| - 0.0023 17.5 0.2 0.0058 16.2 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|452208749|ref|YP_007488863.1| - 0.004 17.1 0.1 0.016 15.1 0.0 2.1 2 1 1 3 3 1 1 AAA domain TrwB_AAD_bind PF10412.4 gi|452208749|ref|YP_007488863.1| - 0.0043 15.7 0.1 0.0076 14.9 0.1 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain Parvo_NS1 PF01057.12 gi|452208749|ref|YP_007488863.1| - 0.0088 14.9 0.0 0.015 14.1 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_33 PF13671.1 gi|452208749|ref|YP_007488863.1| - 0.014 15.2 0.0 0.049 13.5 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|452208749|ref|YP_007488863.1| - 0.021 15.6 0.0 0.1 13.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|452208749|ref|YP_007488863.1| - 0.022 15.0 0.0 0.069 13.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|452208749|ref|YP_007488863.1| - 0.025 14.0 0.0 0.078 12.3 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC_tran PF00005.22 gi|452208749|ref|YP_007488863.1| - 0.026 14.8 0.0 0.1 12.8 0.0 2.0 2 0 0 2 2 1 0 ABC transporter NACHT PF05729.7 gi|452208749|ref|YP_007488863.1| - 0.03 13.9 0.1 0.087 12.4 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_2 PF07724.9 gi|452208749|ref|YP_007488863.1| - 0.11 12.3 3.4 4.4 7.1 0.1 3.0 3 1 0 3 3 2 0 AAA domain (Cdc48 subfamily) DUF3987 PF13148.1 gi|452208749|ref|YP_007488863.1| - 0.65 8.5 3.4 0.94 7.9 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) TPR_12 PF13424.1 gi|452208750|ref|YP_007488864.1| - 5.2e-17 61.5 8.9 7.2e-09 35.4 0.3 2.8 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452208750|ref|YP_007488864.1| - 2.1e-16 58.4 5.4 2.3e-05 23.9 0.8 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452208750|ref|YP_007488864.1| - 1.9e-14 53.0 11.4 1.5e-08 34.1 2.1 4.0 1 1 1 3 3 3 2 TPR repeat TPR_1 PF00515.23 gi|452208750|ref|YP_007488864.1| - 1.2e-12 46.8 10.4 2.5e-05 23.6 1.7 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452208750|ref|YP_007488864.1| - 6.6e-12 44.9 0.7 0.0011 19.3 0.1 4.6 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452208750|ref|YP_007488864.1| - 1.2e-09 38.5 1.3 0.00013 22.5 0.3 3.7 1 1 1 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452208750|ref|YP_007488864.1| - 2.8e-09 36.0 16.3 0.0085 15.7 1.0 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452208750|ref|YP_007488864.1| - 1.3e-08 35.0 10.2 0.016 15.5 2.1 4.1 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452208750|ref|YP_007488864.1| - 5.8e-08 32.6 5.6 0.73 10.4 0.5 4.9 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452208750|ref|YP_007488864.1| - 1.9e-07 30.3 2.0 0.048 13.4 0.1 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452208750|ref|YP_007488864.1| - 4.2e-07 29.6 0.4 0.35 10.8 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452208750|ref|YP_007488864.1| - 1.3e-05 24.9 8.7 0.013 15.6 0.1 5.2 4 3 0 4 4 4 2 Tetratricopeptide repeat TPR_21 PF09976.4 gi|452208750|ref|YP_007488864.1| - 3.4e-05 23.8 6.0 0.00045 20.1 1.1 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|452208750|ref|YP_007488864.1| - 0.00031 20.8 7.9 0.066 13.3 1.0 3.5 2 1 2 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 SNAP PF14938.1 gi|452208750|ref|YP_007488864.1| - 0.00065 18.9 7.3 0.01 15.0 0.4 2.4 1 1 1 2 2 2 2 Soluble NSF attachment protein, SNAP SPO22 PF08631.5 gi|452208750|ref|YP_007488864.1| - 0.0018 17.4 2.1 0.0033 16.5 0.1 2.1 2 1 1 3 3 3 1 Meiosis protein SPO22/ZIP4 like PTS_IIA PF02255.11 gi|452208750|ref|YP_007488864.1| - 0.002 17.9 4.0 1.1 9.1 0.0 3.1 3 1 1 4 4 3 2 PTS system, Lactose/Cellobiose specific IIA subunit DUF3808 PF10300.4 gi|452208750|ref|YP_007488864.1| - 0.01 14.4 0.6 0.015 13.9 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3808) TPR_5 PF12688.2 gi|452208750|ref|YP_007488864.1| - 0.012 15.6 1.5 0.051 13.6 0.1 2.4 2 1 1 3 3 2 0 Tetratrico peptide repeat Fis1_TPR_C PF14853.1 gi|452208750|ref|YP_007488864.1| - 0.014 15.2 5.7 2.2 8.2 0.1 3.9 4 1 0 4 4 3 0 Fis1 C-terminal tetratricopeptide repeat Apc5 PF12862.2 gi|452208750|ref|YP_007488864.1| - 0.02 14.7 1.5 9.4 6.1 0.0 2.9 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 NARP1 PF12569.3 gi|452208750|ref|YP_007488864.1| - 0.029 13.1 7.4 0.045 12.5 2.9 2.1 1 1 1 2 2 2 0 NMDA receptor-regulated protein 1 TPR_3 PF07720.7 gi|452208750|ref|YP_007488864.1| - 0.039 13.7 6.8 0.99 9.2 0.2 3.8 4 0 0 4 4 3 0 Tetratricopeptide repeat PPR PF01535.15 gi|452208750|ref|YP_007488864.1| - 0.04 13.9 2.0 18 5.5 0.0 3.9 4 0 0 4 4 4 0 PPR repeat MIT PF04212.13 gi|452208750|ref|YP_007488864.1| - 0.043 13.7 13.1 1.2 9.0 2.9 4.1 3 1 1 4 4 4 0 MIT (microtubule interacting and transport) domain YfdX PF10938.3 gi|452208750|ref|YP_007488864.1| - 0.043 13.4 5.3 0.06 13.0 0.2 2.6 3 1 0 3 3 3 0 YfdX protein Catalase-rel PF06628.7 gi|452208750|ref|YP_007488864.1| - 0.057 13.2 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Catalase-related immune-responsive DUF4359 PF14271.1 gi|452208750|ref|YP_007488864.1| - 0.08 13.3 0.1 16 5.9 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4359) MAS20 PF02064.10 gi|452208750|ref|YP_007488864.1| - 0.08 12.8 0.1 11 6.0 0.0 2.7 2 1 1 3 3 3 0 MAS20 protein import receptor PPR_1 PF12854.2 gi|452208750|ref|YP_007488864.1| - 0.18 11.3 0.4 4.8 6.7 0.1 2.3 2 0 0 2 2 2 0 PPR repeat DUF572 PF04502.8 gi|452208750|ref|YP_007488864.1| - 0.32 10.1 2.6 0.47 9.6 0.1 2.2 2 1 1 3 3 3 0 Family of unknown function (DUF572) RVT_connect PF06815.8 gi|452208750|ref|YP_007488864.1| - 0.55 10.1 2.1 1 9.2 0.1 2.2 3 0 0 3 3 2 0 Reverse transcriptase connection domain DUF1673 PF07895.6 gi|452208751|ref|YP_007488865.1| - 0.0015 18.1 0.9 0.0017 17.9 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) DUF3923 PF13061.1 gi|452208751|ref|YP_007488865.1| - 0.0064 16.3 14.0 0.0072 16.1 0.9 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF3923) DUF4191 PF13829.1 gi|452208751|ref|YP_007488865.1| - 0.01 15.0 1.8 1.3 8.0 1.2 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4191) RAMP PF04901.8 gi|452208751|ref|YP_007488865.1| - 0.061 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Receptor activity modifying family DUF2178 PF09946.4 gi|452208751|ref|YP_007488865.1| - 0.064 13.0 7.2 0.11 12.2 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2178) Amnionless PF14828.1 gi|452208751|ref|YP_007488865.1| - 0.16 10.4 0.1 0.73 8.2 0.0 1.8 1 1 1 2 2 2 0 Amnionless DUF4131 PF13567.1 gi|452208751|ref|YP_007488865.1| - 0.24 10.7 7.3 0.67 9.3 5.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Gemini_mov PF01708.11 gi|452208751|ref|YP_007488865.1| - 1.2 8.7 6.4 0.28 10.7 0.2 2.4 1 1 0 2 2 2 0 Geminivirus putative movement protein TPR_12 PF13424.1 gi|452208752|ref|YP_007488866.1| - 6e-22 77.3 11.2 5.5e-10 39.0 0.0 5.0 1 1 3 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452208752|ref|YP_007488866.1| - 1.9e-20 71.5 3.2 2e-06 27.1 0.2 6.2 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452208752|ref|YP_007488866.1| - 2.2e-17 61.4 3.5 4.9e-06 26.0 0.1 5.8 4 2 2 6 6 6 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452208752|ref|YP_007488866.1| - 6.4e-16 57.7 12.0 6.6e-08 32.0 0.3 3.5 2 1 1 3 3 3 3 TPR repeat TPR_10 PF13374.1 gi|452208752|ref|YP_007488866.1| - 1.5e-14 53.3 3.3 1.7e-07 30.9 0.0 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452208752|ref|YP_007488866.1| - 2.3e-12 45.7 6.5 0.00026 20.5 0.4 5.8 6 1 1 7 7 5 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452208752|ref|YP_007488866.1| - 2.7e-10 39.2 3.4 0.0004 19.9 0.1 5.4 5 2 0 5 5 5 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452208752|ref|YP_007488866.1| - 3.4e-09 36.5 0.5 0.026 15.1 0.0 5.2 3 2 3 6 6 4 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452208752|ref|YP_007488866.1| - 2.5e-08 33.8 1.0 0.00032 20.9 0.0 5.2 4 2 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452208752|ref|YP_007488866.1| - 6.3e-08 33.0 0.7 0.26 11.9 0.5 3.6 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452208752|ref|YP_007488866.1| - 1.9e-06 28.1 6.5 0.15 12.3 0.1 3.6 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452208752|ref|YP_007488866.1| - 3.6e-06 26.7 9.9 0.014 15.5 0.0 5.8 4 2 1 5 5 5 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|452208752|ref|YP_007488866.1| - 8e-05 22.7 3.2 0.63 10.2 0.1 3.3 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_21 PF09976.4 gi|452208752|ref|YP_007488866.1| - 9.6e-05 22.3 0.2 0.29 11.0 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat MIT PF04212.13 gi|452208752|ref|YP_007488866.1| - 0.00047 19.9 7.7 0.011 15.5 0.4 4.0 4 0 0 4 4 4 1 MIT (microtubule interacting and transport) domain NARP1 PF12569.3 gi|452208752|ref|YP_007488866.1| - 0.0007 18.4 7.5 0.14 10.8 0.3 2.7 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 TPR_9 PF13371.1 gi|452208752|ref|YP_007488866.1| - 0.00081 19.2 0.1 3.1 7.7 0.2 3.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_3 PF07720.7 gi|452208752|ref|YP_007488866.1| - 0.0011 18.7 0.8 1.5 8.6 0.2 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TOM20_plant PF06552.7 gi|452208752|ref|YP_007488866.1| - 0.0043 16.6 0.3 0.19 11.3 0.0 3.0 1 1 1 3 3 3 1 Plant specific mitochondrial import receptor subunit TOM20 Fis1_TPR_C PF14853.1 gi|452208752|ref|YP_007488866.1| - 0.0075 16.1 1.6 4.2 7.3 0.0 3.0 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat YfiO PF13525.1 gi|452208752|ref|YP_007488866.1| - 0.0093 15.4 0.7 0.012 15.0 0.0 1.5 2 0 0 2 2 1 1 Outer membrane lipoprotein SNAP PF14938.1 gi|452208752|ref|YP_007488866.1| - 0.0094 15.1 1.0 0.088 11.9 0.0 2.1 1 1 1 2 2 2 1 Soluble NSF attachment protein, SNAP RPN7 PF10602.4 gi|452208752|ref|YP_007488866.1| - 0.019 14.3 1.7 2.4 7.4 0.0 2.6 1 1 0 2 2 2 0 26S proteasome subunit RPN7 DUF3856 PF12968.2 gi|452208752|ref|YP_007488866.1| - 0.021 14.6 0.4 23 4.7 0.0 3.1 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_4 PF07721.9 gi|452208752|ref|YP_007488866.1| - 0.027 14.8 0.0 8.6 7.1 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat YfdX PF10938.3 gi|452208752|ref|YP_007488866.1| - 0.054 13.1 0.2 0.78 9.3 0.2 2.2 2 0 0 2 2 2 0 YfdX protein GST_C PF00043.20 gi|452208752|ref|YP_007488866.1| - 0.055 13.4 0.4 0.66 10.0 0.1 2.3 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain CCDC66 PF15236.1 gi|452208752|ref|YP_007488866.1| - 0.059 12.9 1.9 0.73 9.4 0.7 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 66 SHNi-TPR PF10516.4 gi|452208752|ref|YP_007488866.1| - 0.078 12.2 1.9 0.23 10.7 0.4 2.4 2 0 0 2 2 2 0 SHNi-TPR PTS_IIA PF02255.11 gi|452208752|ref|YP_007488866.1| - 0.17 11.7 2.1 7 6.6 0.6 2.5 2 1 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit Apc5 PF12862.2 gi|452208752|ref|YP_007488866.1| - 0.21 11.4 1.6 0.72 9.7 0.2 2.5 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 Prefoldin PF02996.12 gi|452208752|ref|YP_007488866.1| - 0.83 9.3 5.9 0.62 9.7 0.3 2.8 3 1 0 3 3 2 0 Prefoldin subunit DUF2082 PF09855.4 gi|452208753|ref|YP_007488867.1| - 4.6e-31 106.4 1.7 5.1e-31 106.3 1.2 1.0 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Ribosomal_L37e PF01907.14 gi|452208753|ref|YP_007488867.1| - 7.3e-05 22.4 0.8 0.28 11.0 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L37e Zn_Tnp_IS1595 PF12760.2 gi|452208753|ref|YP_007488867.1| - 0.00036 20.2 3.0 0.0088 15.8 2.6 2.0 1 1 1 2 2 2 1 Transposase zinc-ribbon domain zf-C2H2_3 PF13878.1 gi|452208753|ref|YP_007488867.1| - 0.0028 17.1 1.0 0.024 14.1 0.1 2.1 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO Mcm10 PF09332.6 gi|452208753|ref|YP_007488867.1| - 0.0029 16.9 0.2 0.0057 16.0 0.0 1.5 2 0 0 2 2 2 1 Mcm10 replication factor DUF2296 PF10058.4 gi|452208753|ref|YP_007488867.1| - 0.017 14.8 1.2 0.48 10.2 0.1 2.2 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) TF_Zn_Ribbon PF08271.7 gi|452208753|ref|YP_007488867.1| - 0.017 14.3 0.6 0.31 10.4 0.1 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Elf1 PF05129.8 gi|452208753|ref|YP_007488867.1| - 0.029 14.0 1.5 0.06 13.0 1.0 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like RNA_POL_M_15KD PF02150.11 gi|452208753|ref|YP_007488867.1| - 0.034 13.8 3.4 2.2 8.0 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zinc_ribbon_4 PF13717.1 gi|452208753|ref|YP_007488867.1| - 0.036 13.7 0.7 5.6 6.7 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|452208753|ref|YP_007488867.1| - 0.046 13.2 0.6 6.1 6.5 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Tnp_zf-ribbon_2 PF13842.1 gi|452208753|ref|YP_007488867.1| - 0.055 13.8 3.7 6.4 7.2 1.2 2.1 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-Mss51 PF13824.1 gi|452208753|ref|YP_007488867.1| - 0.06 13.2 0.5 0.37 10.6 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 OrfB_Zn_ribbon PF07282.6 gi|452208753|ref|YP_007488867.1| - 0.064 12.9 0.1 7.3 6.3 0.0 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain TFIIS_C PF01096.13 gi|452208753|ref|YP_007488867.1| - 0.072 12.7 2.6 4.4 7.0 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-3CxxC PF13695.1 gi|452208753|ref|YP_007488867.1| - 0.075 13.2 0.1 0.081 13.1 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding domain DUF3797 PF12677.2 gi|452208753|ref|YP_007488867.1| - 0.092 12.3 2.2 2.5 7.7 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) DUF1610 PF07754.6 gi|452208753|ref|YP_007488867.1| - 0.11 12.6 1.4 0.11 12.6 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) PhnA_Zn_Ribbon PF08274.7 gi|452208753|ref|YP_007488867.1| - 0.11 12.3 0.7 0.31 10.8 0.0 1.9 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zf-IS66 PF13005.2 gi|452208753|ref|YP_007488867.1| - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 zinc-finger binding domain of transposase IS66 zf-ribbon_3 PF13248.1 gi|452208753|ref|YP_007488867.1| - 0.15 11.3 2.1 0.7 9.1 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain CpXC PF14353.1 gi|452208753|ref|YP_007488867.1| - 0.16 11.9 3.6 3.3 7.6 2.6 2.0 1 1 0 1 1 1 0 CpXC protein zinc_ribbon_2 PF13240.1 gi|452208753|ref|YP_007488867.1| - 0.17 11.3 2.7 0.23 10.9 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|452208753|ref|YP_007488867.1| - 0.24 10.8 3.6 3.2 7.3 0.3 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.2 gi|452208753|ref|YP_007488867.1| - 0.3 10.9 2.6 0.98 9.2 1.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon zf-C4_Topoisom PF01396.14 gi|452208753|ref|YP_007488867.1| - 0.39 10.2 3.6 4.4 6.8 0.2 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-AN1 PF01428.11 gi|452208753|ref|YP_007488867.1| - 0.51 10.2 4.4 7.7 6.4 0.4 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger zf-H2C2_2 PF13465.1 gi|452208753|ref|YP_007488867.1| - 0.51 10.7 3.8 4.1 7.8 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain PALP PF00291.20 gi|452208755|ref|YP_007488869.1| - 1.2e-28 100.2 0.0 1.5e-28 99.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.16 gi|452208756|ref|YP_007488870.1| - 2e-19 69.6 0.1 7.7e-18 64.5 0.0 2.6 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|452208756|ref|YP_007488870.1| - 2.6e-10 40.0 0.0 5.1e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|452208756|ref|YP_007488870.1| - 0.11 11.4 0.7 4.3 6.1 0.1 2.5 2 1 1 3 3 3 0 1-deoxy-D-xylulose-5-phosphate synthase DUF39 PF01837.11 gi|452208757|ref|YP_007488871.1| - 4.7e-108 360.8 0.0 5.3e-108 360.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF39 Fer4 PF00037.22 gi|452208757|ref|YP_007488871.1| - 1.2e-05 24.7 14.5 0.0027 17.2 0.4 3.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208757|ref|YP_007488871.1| - 2.4e-05 24.0 10.3 2.4e-05 24.0 7.2 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452208757|ref|YP_007488871.1| - 5.3e-05 23.5 13.4 7e-05 23.1 8.0 2.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452208757|ref|YP_007488871.1| - 0.00022 21.4 12.2 0.00031 20.9 7.7 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208757|ref|YP_007488871.1| - 0.0018 18.0 15.5 0.014 15.3 2.3 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452208757|ref|YP_007488871.1| - 0.014 15.2 4.4 0.014 15.2 3.1 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452208757|ref|YP_007488871.1| - 0.047 14.4 10.7 1.1 10.0 1.7 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452208757|ref|YP_007488871.1| - 0.29 11.0 13.1 0.33 10.8 7.0 2.5 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452208757|ref|YP_007488871.1| - 0.31 11.1 12.5 0.42 10.6 7.4 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452208757|ref|YP_007488871.1| - 0.61 10.4 11.8 22 5.4 1.8 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452208757|ref|YP_007488871.1| - 1.9 8.9 8.6 7.2 7.1 0.6 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452208757|ref|YP_007488871.1| - 2.3 8.8 15.4 0.9 10.0 1.3 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Lactamase_B PF00753.22 gi|452208758|ref|YP_007488872.1| - 1.5e-15 57.3 0.2 2e-15 56.9 0.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452208758|ref|YP_007488872.1| - 9.4e-07 28.5 0.1 1.2e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF1287 PF06940.6 gi|452208758|ref|YP_007488872.1| - 0.023 14.0 0.2 3.2 7.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1287) ProRS-C_1 PF09180.6 gi|452208758|ref|YP_007488872.1| - 0.07 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal ThiS PF02597.15 gi|452208760|ref|YP_007488874.1| - 0.00019 21.7 1.5 0.00027 21.2 1.0 1.3 1 1 0 1 1 1 1 ThiS family DUF3712 PF12505.3 gi|452208760|ref|YP_007488874.1| - 0.13 12.2 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3712) HTH_34 PF13601.1 gi|452208763|ref|YP_007488877.1| - 0.0034 17.3 0.0 0.0069 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain DSPc PF00782.15 gi|452208763|ref|YP_007488877.1| - 0.016 14.7 0.8 0.092 12.3 0.1 2.0 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.14 gi|452208763|ref|YP_007488877.1| - 0.019 14.6 0.2 0.044 13.4 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cytochrom_C_asm PF01578.15 gi|452208764|ref|YP_007488878.1| - 1.6e-25 89.9 28.4 1.6e-25 89.9 19.7 2.5 2 1 1 3 3 3 2 Cytochrome C assembly protein ResB PF05140.9 gi|452208765|ref|YP_007488879.1| - 3.4e-07 29.1 0.4 0.00043 18.9 0.0 2.1 2 0 0 2 2 2 2 ResB-like family DUF46 PF01864.12 gi|452208766|ref|YP_007488880.1| - 9.4e-47 159.1 1.9 1.1e-46 158.9 1.3 1.0 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|452208766|ref|YP_007488880.1| - 2.6e-08 33.8 3.5 2.6e-08 33.8 2.4 1.8 1 1 1 2 2 2 1 Cytidylyltransferase family Pribosyltran PF00156.22 gi|452208767|ref|YP_007488881.1| - 1.9e-13 50.2 2.1 7.7e-13 48.2 1.4 1.9 1 1 0 1 1 1 1 Phosphoribosyl transferase domain Glycogen_syn PF05693.8 gi|452208767|ref|YP_007488881.1| - 0.029 12.6 0.0 0.039 12.2 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase UPRTase PF14681.1 gi|452208767|ref|YP_007488881.1| - 0.062 12.5 0.0 0.14 11.3 0.0 1.6 1 1 0 1 1 1 0 Uracil phosphoribosyltransferase CMD PF02627.15 gi|452208768|ref|YP_007488882.1| - 1.9e-14 53.2 0.1 2.1e-14 53.1 0.1 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family GARS_A PF01071.14 gi|452208769|ref|YP_007488883.1| - 3.6e-56 189.8 0.0 7.3e-56 188.8 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|452208769|ref|YP_007488883.1| - 9.9e-31 106.1 0.3 1.9e-30 105.2 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|452208769|ref|YP_007488883.1| - 2.4e-20 72.4 0.3 7.1e-20 70.9 0.3 1.8 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|452208769|ref|YP_007488883.1| - 7.8e-14 51.8 0.0 2.1e-13 50.4 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452208769|ref|YP_007488883.1| - 1.3e-05 24.1 0.0 4.2e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|452208769|ref|YP_007488883.1| - 0.0014 18.5 0.0 0.0025 17.6 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|452208769|ref|YP_007488883.1| - 0.074 12.3 0.0 0.18 11.0 0.0 1.7 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain GFO_IDH_MocA PF01408.17 gi|452208769|ref|YP_007488883.1| - 0.089 13.3 0.1 0.39 11.2 0.0 2.2 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold GSH-S_ATP PF02955.11 gi|452208769|ref|YP_007488883.1| - 0.094 11.8 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain OTCace PF00185.19 gi|452208770|ref|YP_007488884.1| - 3.5e-56 189.4 0.0 4.9e-56 188.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|452208770|ref|YP_007488884.1| - 2.2e-50 170.0 0.0 3e-50 169.5 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DUF1788 PF08747.6 gi|452208772|ref|YP_007488886.1| - 7.9e-46 155.0 0.1 1.3e-45 154.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1788) NACHT PF05729.7 gi|452208773|ref|YP_007488887.1| - 0.041 13.5 0.1 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 NACHT domain SMC_N PF02463.14 gi|452208773|ref|YP_007488887.1| - 0.073 12.2 5.1 0.024 13.8 0.5 2.5 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain TPR_12 PF13424.1 gi|452208774|ref|YP_007488888.1| - 1e-31 108.6 30.7 9.6e-08 31.8 1.0 9.0 4 3 5 9 9 9 9 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452208774|ref|YP_007488888.1| - 1.7e-17 62.2 8.9 0.64 10.8 0.2 13.4 13 2 1 14 14 14 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452208774|ref|YP_007488888.1| - 2e-17 61.9 38.5 0.0073 15.8 0.0 11.7 13 0 0 13 13 12 7 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452208774|ref|YP_007488888.1| - 2.1e-17 61.4 13.5 0.03 14.1 0.1 10.5 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452208774|ref|YP_007488888.1| - 4.4e-16 57.3 49.4 0.0046 16.6 0.3 13.2 14 0 0 14 14 14 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452208774|ref|YP_007488888.1| - 1.5e-15 56.5 36.8 7.1e-06 25.5 0.7 8.9 6 4 4 10 10 9 8 TPR repeat TPR_2 PF07719.12 gi|452208774|ref|YP_007488888.1| - 4.9e-13 47.9 45.7 0.032 14.1 0.4 12.7 14 0 0 14 14 13 5 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452208774|ref|YP_007488888.1| - 1.9e-11 43.4 15.9 0.015 15.2 0.1 9.5 11 0 0 11 11 10 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452208774|ref|YP_007488888.1| - 7.4e-08 32.6 28.4 0.35 11.2 0.0 10.9 7 2 5 12 12 12 4 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452208774|ref|YP_007488888.1| - 2.9e-07 30.4 34.1 7.5 7.2 0.1 12.7 14 1 0 14 14 10 1 Tetratricopeptide repeat MIT PF04212.13 gi|452208774|ref|YP_007488888.1| - 5.1e-05 23.0 26.5 0.54 10.1 0.0 8.1 9 1 1 10 10 10 3 MIT (microtubule interacting and transport) domain DUF2225 PF09986.4 gi|452208774|ref|YP_007488888.1| - 7.2e-05 22.3 12.1 0.098 12.1 0.1 5.0 1 1 1 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2225) TPR_16 PF13432.1 gi|452208774|ref|YP_007488888.1| - 7.7e-05 23.2 23.0 2.2 9.0 0.0 9.8 10 3 1 11 11 11 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452208774|ref|YP_007488888.1| - 8.1e-05 22.5 11.4 14 6.1 0.1 9.4 9 0 0 9 9 9 0 Tetratricopeptide repeat DUF310 PF03750.8 gi|452208774|ref|YP_007488888.1| - 0.0083 16.3 2.9 1.5 9.0 0.1 3.4 2 0 0 2 2 2 1 Protein of unknown function (DUF310) TPR_21 PF09976.4 gi|452208774|ref|YP_007488888.1| - 0.021 14.7 17.4 0.19 11.6 0.1 5.2 5 1 0 5 5 5 0 Tetratricopeptide repeat X_fast-SP_rel PF06669.6 gi|452208774|ref|YP_007488888.1| - 0.21 11.5 0.0 0.4 10.6 0.0 1.4 1 0 0 1 1 1 0 Xylella fastidiosa surface protein related Methyltransf_26 PF13659.1 gi|452208775|ref|YP_007488889.1| - 1.7e-18 66.7 0.0 3.4e-18 65.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.11 gi|452208775|ref|YP_007488889.1| - 2e-10 40.2 0.0 0.00013 21.2 0.0 2.5 2 0 0 2 2 2 2 N-6 DNA Methylase Eco57I PF07669.6 gi|452208775|ref|YP_007488889.1| - 4.9e-10 39.7 0.0 2.5e-09 37.4 0.0 2.2 2 0 0 2 2 2 1 Eco57I restriction-modification methylase UPF0020 PF01170.13 gi|452208775|ref|YP_007488889.1| - 0.026 14.1 0.3 3.5 7.1 0.0 2.7 3 0 0 3 3 3 0 Putative RNA methylase family UPF0020 Dzip-like_N PF13815.1 gi|452208776|ref|YP_007488890.1| - 0.0028 17.4 0.6 0.006 16.3 0.4 1.5 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal CPSase_L_D3 PF02787.14 gi|452208776|ref|YP_007488890.1| - 0.08 12.7 0.4 0.17 11.6 0.3 1.6 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF724 PF05266.9 gi|452208776|ref|YP_007488890.1| - 0.43 10.1 6.6 0.11 12.1 2.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF4200 PF13863.1 gi|452208776|ref|YP_007488890.1| - 0.52 10.2 7.0 0.13 12.2 1.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) AAA_4 PF04326.9 gi|452208777|ref|YP_007488891.1| - 3e-08 33.8 0.1 3.6e-08 33.6 0.1 1.1 1 0 0 1 1 1 1 Divergent AAA domain AAA_4 PF04326.9 gi|452208778|ref|YP_007488892.1| - 1.3e-05 25.2 0.0 1.4e-05 25.2 0.0 1.0 1 0 0 1 1 1 1 Divergent AAA domain HATPase_c_4 PF13749.1 gi|452208779|ref|YP_007488893.1| - 2.5e-25 88.0 0.0 4.1e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HTH_27 PF13463.1 gi|452208779|ref|YP_007488893.1| - 0.00049 20.3 0.1 0.0011 19.2 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|452208779|ref|YP_007488893.1| - 0.0012 18.8 0.1 0.002 18.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|452208779|ref|YP_007488893.1| - 0.0034 17.1 0.1 0.0062 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.9 gi|452208779|ref|YP_007488893.1| - 0.046 13.4 0.0 0.094 12.4 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|452208780|ref|YP_007488894.1| - 0.00011 21.9 0.0 0.00023 20.9 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|452208780|ref|YP_007488894.1| - 0.012 15.9 0.0 0.026 14.8 0.0 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.9 gi|452208780|ref|YP_007488894.1| - 0.02 14.6 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family YjcQ PF09639.5 gi|452208780|ref|YP_007488894.1| - 0.074 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 YjcQ protein Mrr_N PF14338.1 gi|452208782|ref|YP_007488896.1| - 0.003 17.6 0.0 0.0055 16.7 0.0 1.5 1 0 0 1 1 1 1 Mrr N-terminal domain YcfA PF07927.7 gi|452208783|ref|YP_007488897.1| - 1.2e-15 57.1 0.1 1.6e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 YcfA-like protein BRX_N PF13713.1 gi|452208783|ref|YP_007488897.1| - 0.16 11.4 0.4 0.38 10.2 0.0 1.7 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain UPF0150 PF03681.10 gi|452208784|ref|YP_007488898.1| - 1.1e-17 63.3 0.3 1.6e-17 62.8 0.2 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|452208784|ref|YP_007488898.1| - 2.8e-06 27.2 0.1 3.9e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3832) RE_MjaI PF09568.5 gi|452208784|ref|YP_007488898.1| - 0.1 12.1 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 MjaI restriction endonuclease Arch_ATPase PF01637.13 gi|452208785|ref|YP_007488899.1| - 1.8e-26 93.3 2.0 1.8e-26 93.3 1.4 2.5 2 1 0 2 2 2 1 Archaeal ATPase DUF234 PF03008.9 gi|452208785|ref|YP_007488899.1| - 6.4e-23 80.7 0.5 5.3e-22 77.8 0.1 2.6 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.1 gi|452208785|ref|YP_007488899.1| - 5.7e-12 45.6 0.8 1.7e-11 44.1 0.2 2.0 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452208785|ref|YP_007488899.1| - 1.1e-05 25.5 0.0 2.3e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|452208785|ref|YP_007488899.1| - 0.00026 21.0 0.2 0.00072 19.6 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) AAA_16 PF13191.1 gi|452208785|ref|YP_007488899.1| - 0.0022 18.0 0.1 0.057 13.4 0.0 2.4 1 1 0 2 2 2 1 AAA ATPase domain HAD PF12710.2 gi|452208785|ref|YP_007488899.1| - 0.0041 17.3 0.0 0.058 13.5 0.0 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Miro PF08477.8 gi|452208785|ref|YP_007488899.1| - 0.021 15.2 0.0 0.36 11.3 0.0 2.6 3 0 0 3 3 3 0 Miro-like protein HTH_5 PF01022.15 gi|452208785|ref|YP_007488899.1| - 0.022 14.4 0.1 0.05 13.2 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family PglZ PF08665.7 gi|452208786|ref|YP_007488900.1| - 6.7e-63 211.6 0.1 6.7e-63 211.6 0.1 2.5 3 0 0 3 3 3 1 PglZ domain Thioredoxin_2 PF13098.1 gi|452208786|ref|YP_007488900.1| - 0.004 17.3 0.1 0.72 10.0 0.1 3.0 2 0 0 2 2 2 2 Thioredoxin-like domain Lon_2 PF13337.1 gi|452208787|ref|YP_007488901.1| - 4.8e-169 562.5 0.1 5.7e-169 562.2 0.1 1.0 1 0 0 1 1 1 1 Putative ATP-dependent Lon protease Saccharop_dh PF03435.13 gi|452208788|ref|YP_007488902.1| - 3.4e-98 329.1 0.0 3.9e-98 328.9 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase Cation_efflux PF01545.16 gi|452208789|ref|YP_007488903.1| - 5.9e-58 196.1 4.8 7.9e-58 195.7 3.4 1.1 1 0 0 1 1 1 1 Cation efflux family Zip PF02535.17 gi|452208789|ref|YP_007488903.1| - 0.028 13.4 2.5 0.054 12.5 1.7 1.5 1 0 0 1 1 1 0 ZIP Zinc transporter Cation_ATPase_C PF00689.16 gi|452208789|ref|YP_007488903.1| - 1.1 8.8 6.1 1.9 7.9 1.8 2.2 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus PAS_9 PF13426.1 gi|452208790|ref|YP_007488904.1| - 1.5e-91 301.6 1.6 9.4e-20 70.9 0.0 9.2 9 0 0 9 9 9 7 PAS domain PAS_4 PF08448.5 gi|452208790|ref|YP_007488904.1| - 5.1e-81 267.9 0.0 3.1e-23 81.8 0.0 8.5 8 0 0 8 8 8 6 PAS fold PAS PF00989.19 gi|452208790|ref|YP_007488904.1| - 3e-74 246.0 0.1 5.7e-17 61.5 0.0 9.0 9 0 0 9 9 9 7 PAS fold PAS_3 PF08447.6 gi|452208790|ref|YP_007488904.1| - 5.3e-46 154.6 0.1 4.9e-16 58.6 0.0 7.4 7 0 0 7 7 6 5 PAS fold PAS_8 PF13188.1 gi|452208790|ref|YP_007488904.1| - 1.9e-38 129.0 0.0 1.5e-08 34.2 0.0 8.2 9 0 0 9 9 9 6 PAS domain HisKA_2 PF07568.7 gi|452208790|ref|YP_007488904.1| - 2.9e-34 116.7 0.4 1.6e-33 114.3 0.2 2.4 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.1 gi|452208790|ref|YP_007488904.1| - 3.9e-28 98.8 0.0 1.7e-15 57.7 0.0 4.2 3 1 0 3 3 3 2 GAF domain PAS_7 PF12860.2 gi|452208790|ref|YP_007488904.1| - 8.9e-17 61.1 4.2 0.022 14.7 0.0 9.3 8 4 0 8 8 8 4 PAS fold PAS_10 PF13596.1 gi|452208790|ref|YP_007488904.1| - 4.1e-14 52.7 0.0 1.7e-06 28.2 0.0 6.3 7 0 0 7 7 7 2 PAS domain HATPase_c PF02518.21 gi|452208790|ref|YP_007488904.1| - 2.2e-11 43.4 0.1 5.9e-11 42.0 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|452208790|ref|YP_007488904.1| - 5.5e-06 26.1 0.0 1.3e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain GAF_3 PF13492.1 gi|452208790|ref|YP_007488904.1| - 6.7e-05 22.9 0.0 0.0063 16.6 0.0 3.5 4 0 0 4 4 4 1 GAF domain HWE_HK PF07536.9 gi|452208790|ref|YP_007488904.1| - 0.00056 20.2 0.0 0.0027 18.1 0.0 2.2 2 0 0 2 2 1 1 HWE histidine kinase GAF PF01590.21 gi|452208790|ref|YP_007488904.1| - 0.0016 18.5 0.0 0.012 15.7 0.0 2.4 3 0 0 3 3 3 1 GAF domain MEKHLA PF08670.6 gi|452208790|ref|YP_007488904.1| - 0.18 11.3 0.0 0.46 10.0 0.0 1.7 1 0 0 1 1 1 0 MEKHLA domain ZYG-11_interact PF05884.7 gi|452208790|ref|YP_007488904.1| - 0.54 9.2 0.2 1 8.3 0.2 1.3 1 0 0 1 1 1 0 Interactor of ZYG-11 PAS_3 PF08447.6 gi|452208791|ref|YP_007488905.1| - 7.7e-44 147.7 1.3 1.1e-15 57.5 0.1 5.4 4 2 0 4 4 4 4 PAS fold HisKA_2 PF07568.7 gi|452208791|ref|YP_007488905.1| - 1.5e-35 120.9 5.0 4.7e-35 119.2 0.6 3.4 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.1 gi|452208791|ref|YP_007488905.1| - 8.5e-34 116.0 0.1 2.8e-12 46.9 0.0 5.5 5 0 0 5 5 5 4 PAS domain PAS_4 PF08448.5 gi|452208791|ref|YP_007488905.1| - 3.9e-27 94.4 0.3 1.6e-10 40.9 0.0 5.1 4 1 0 4 4 4 3 PAS fold PAS PF00989.19 gi|452208791|ref|YP_007488905.1| - 4.6e-18 65.0 0.1 0.0016 18.2 0.0 5.7 5 1 0 5 5 5 4 PAS fold HATPase_c PF02518.21 gi|452208791|ref|YP_007488905.1| - 1.9e-09 37.2 0.2 4.9e-09 35.9 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|452208791|ref|YP_007488905.1| - 3e-07 30.4 2.8 2.1e-05 24.4 0.0 4.1 4 1 0 4 4 3 1 PAS fold HWE_HK PF07536.9 gi|452208791|ref|YP_007488905.1| - 0.00011 22.5 1.3 0.00063 20.1 0.2 2.7 2 0 0 2 2 2 1 HWE histidine kinase PAS_8 PF13188.1 gi|452208791|ref|YP_007488905.1| - 0.00038 20.2 0.0 0.007 16.1 0.0 2.9 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|452208791|ref|YP_007488905.1| - 0.0013 18.4 0.0 0.0038 17.0 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.1 gi|452208791|ref|YP_007488905.1| - 0.011 16.0 0.5 7.1 6.9 0.0 4.3 5 1 0 5 5 5 0 PAS domain DUF619 PF04768.8 gi|452208791|ref|YP_007488905.1| - 0.02 14.3 0.0 0.087 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF619) DUF2560 PF10834.3 gi|452208791|ref|YP_007488905.1| - 0.8 9.7 3.8 7.2 6.6 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2560) HTH_29 PF13551.1 gi|452208792|ref|YP_007488906.1| - 1.4e-11 44.4 0.0 1.6e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|452208792|ref|YP_007488906.1| - 8e-10 39.3 0.0 8.9e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Homeodomain-like domain PocR PF10114.4 gi|452208793|ref|YP_007488907.1| - 2.4e-70 235.1 0.0 4.1e-70 234.4 0.0 1.4 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|452208793|ref|YP_007488907.1| - 7.2e-25 87.3 0.0 4.2e-17 62.4 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|452208793|ref|YP_007488907.1| - 2.8e-21 75.5 0.0 6.4e-12 45.4 0.0 2.7 3 0 0 3 3 3 2 PAS fold PAS PF00989.19 gi|452208793|ref|YP_007488907.1| - 2e-20 72.6 0.0 1.1e-13 50.9 0.0 3.6 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.6 gi|452208793|ref|YP_007488907.1| - 2.1e-08 34.1 0.0 7.9e-05 22.6 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|452208793|ref|YP_007488907.1| - 3.7e-08 32.9 0.0 4.5e-06 26.3 0.0 3.6 4 0 0 4 4 4 1 PAS domain CbiZ PF01955.13 gi|452208794|ref|YP_007488908.1| - 1.8e-52 177.8 0.1 2.3e-52 177.6 0.1 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase B12-binding PF02310.14 gi|452208795|ref|YP_007488909.1| - 2.7e-20 72.4 0.4 5.2e-20 71.5 0.3 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452208795|ref|YP_007488909.1| - 9.1e-15 54.4 0.1 2e-14 53.3 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain UPF0180 PF03698.8 gi|452208795|ref|YP_007488909.1| - 0.029 14.2 0.0 2.9 7.7 0.0 3.1 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0180) Mut7-C PF01927.11 gi|452208795|ref|YP_007488909.1| - 0.051 13.5 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 Mut7-C RNAse domain MtaB PF12176.3 gi|452208796|ref|YP_007488910.1| - 2.2e-251 834.0 8.1 2.5e-251 833.9 5.6 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Macro PF01661.16 gi|452208797|ref|YP_007488911.1| - 3.9e-45 152.5 0.0 6e-45 151.9 0.0 1.3 1 0 0 1 1 1 1 Macro domain DUF3303 PF11746.3 gi|452208798|ref|YP_007488912.1| - 5.6e-05 23.4 0.0 8.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) Acetyltransf_1 PF00583.19 gi|452208799|ref|YP_007488913.1| - 1.7e-16 60.0 0.0 2.7e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452208799|ref|YP_007488913.1| - 4.3e-10 39.6 0.1 6.5e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452208799|ref|YP_007488913.1| - 2.1e-07 31.0 0.0 2.7e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452208799|ref|YP_007488913.1| - 5.5e-06 26.3 0.0 1e-05 25.4 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452208799|ref|YP_007488913.1| - 0.00012 21.9 0.0 0.0002 21.1 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.1 gi|452208799|ref|YP_007488913.1| - 0.0012 18.9 0.0 0.0016 18.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452208799|ref|YP_007488913.1| - 0.0025 17.7 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|452208799|ref|YP_007488913.1| - 0.011 15.6 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452208799|ref|YP_007488913.1| - 0.023 14.5 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452208799|ref|YP_007488913.1| - 0.024 14.3 0.0 0.096 12.4 0.0 1.8 2 0 0 2 2 2 0 FR47-like protein DUF2156 PF09924.4 gi|452208802|ref|YP_007488916.1| - 2.4e-46 157.9 0.0 2.7e-46 157.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2156) ThiC PF01964.13 gi|452208803|ref|YP_007488917.1| - 4.6e-177 588.7 0.0 5.1e-177 588.6 0.0 1.0 1 0 0 1 1 1 1 ThiC family Adhesin_Dr PF04619.7 gi|452208803|ref|YP_007488917.1| - 0.055 13.1 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Dr-family adhesin Topoisom_bac PF01131.15 gi|452208804|ref|YP_007488918.1| - 4.3e-102 341.9 0.1 6e-102 341.4 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.17 gi|452208804|ref|YP_007488918.1| - 3.5e-16 58.9 0.1 1.3e-15 57.2 0.0 2.0 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.14 gi|452208804|ref|YP_007488918.1| - 1.7e-13 49.8 10.9 1e-08 34.5 0.3 3.6 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger OEP PF02321.13 gi|452208804|ref|YP_007488918.1| - 0.0027 17.3 0.0 0.0058 16.2 0.0 1.5 1 0 0 1 1 1 1 Outer membrane efflux protein Auto_anti-p27 PF06677.7 gi|452208804|ref|YP_007488918.1| - 0.01 15.5 0.1 0.01 15.5 0.1 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_4 PF13662.1 gi|452208804|ref|YP_007488918.1| - 0.087 12.8 0.4 0.32 11.0 0.3 2.0 1 1 0 1 1 1 0 Toprim domain DUF1451 PF07295.6 gi|452208804|ref|YP_007488918.1| - 1.5 8.5 9.4 0.23 11.2 0.7 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1451) Ribosomal_S3Ae PF01015.13 gi|452208805|ref|YP_007488919.1| - 5.5e-71 237.9 4.1 6.7e-71 237.6 2.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF3672 PF12421.3 gi|452208805|ref|YP_007488919.1| - 0.025 14.7 2.0 0.042 13.9 1.4 1.4 1 1 0 1 1 1 0 Fibronectin type III protein adh_short PF00106.20 gi|452208808|ref|YP_007488922.1| - 8.3e-33 113.6 0.1 1e-32 113.3 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|452208808|ref|YP_007488922.1| - 9.1e-29 100.9 0.1 1.1e-28 100.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|452208808|ref|YP_007488922.1| - 6.1e-15 55.3 0.1 7.9e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.10 gi|452208808|ref|YP_007488922.1| - 4.8e-05 22.4 0.2 6.5e-05 21.9 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.16 gi|452208808|ref|YP_007488922.1| - 0.00011 21.6 0.1 0.00014 21.3 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|452208808|ref|YP_007488922.1| - 0.00027 21.0 0.1 0.00062 19.8 0.1 1.5 1 1 0 1 1 1 1 NADH(P)-binding Pyr_redox PF00070.22 gi|452208808|ref|YP_007488922.1| - 0.00078 19.7 1.2 0.0027 18.0 0.1 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3Beta_HSD PF01073.14 gi|452208808|ref|YP_007488922.1| - 0.0072 15.0 0.2 0.0091 14.7 0.2 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DFP PF04127.10 gi|452208808|ref|YP_007488922.1| - 0.017 14.7 0.1 0.033 13.7 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NmrA PF05368.8 gi|452208808|ref|YP_007488922.1| - 0.035 13.3 0.4 0.056 12.6 0.3 1.3 1 0 0 1 1 1 0 NmrA-like family 3HCDH_N PF02737.13 gi|452208808|ref|YP_007488922.1| - 0.056 13.0 1.0 0.085 12.4 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Enoyl_reductase PF12241.3 gi|452208808|ref|YP_007488922.1| - 0.059 12.3 0.1 0.091 11.7 0.0 1.3 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region Glyco_transf_5 PF08323.6 gi|452208808|ref|YP_007488922.1| - 0.064 12.7 0.0 3.3 7.1 0.0 2.1 2 0 0 2 2 2 0 Starch synthase catalytic domain RmlD_sub_bind PF04321.12 gi|452208808|ref|YP_007488922.1| - 0.088 11.6 0.1 0.14 11.0 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Glyco_trans_4_2 PF13477.1 gi|452208808|ref|YP_007488922.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase 4-like NTP_transf_2 PF01909.18 gi|452208809|ref|YP_007488923.1| - 7.4e-13 48.6 0.4 8.6e-13 48.4 0.2 1.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|452208809|ref|YP_007488923.1| - 0.024 14.6 0.1 0.024 14.6 0.0 1.2 1 1 0 1 1 1 0 DNA polymerase beta palm GYD PF08734.6 gi|452208811|ref|YP_007488925.1| - 2.5e-07 30.3 0.0 2.6e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 GYD domain PDDEXK_1 PF12705.2 gi|452208814|ref|YP_007488928.1| - 5.5e-09 35.7 0.2 6.2e-09 35.6 0.1 1.0 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.12 gi|452208814|ref|YP_007488928.1| - 3.8e-08 33.4 2.0 4.7e-08 33.1 1.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 DUF2800 PF10926.3 gi|452208814|ref|YP_007488928.1| - 0.00048 19.3 0.1 0.00053 19.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) bHLH-MYC_N PF14215.1 gi|452208814|ref|YP_007488928.1| - 0.046 13.9 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal Methyltransf_31 PF13847.1 gi|452208814|ref|YP_007488928.1| - 0.049 13.2 0.1 0.057 12.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_S4e PF00900.15 gi|452208814|ref|YP_007488928.1| - 0.11 12.1 0.9 0.29 10.8 0.6 1.8 1 1 0 1 1 1 0 Ribosomal family S4e FAM165 PF14981.1 gi|452208815|ref|YP_007488929.1| - 0.12 11.9 0.1 0.12 11.9 0.1 1.6 2 0 0 2 2 2 0 FAM165 family DUF3979 PF13141.1 gi|452208816|ref|YP_007488930.1| - 0.013 15.3 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) AAA_4 PF04326.9 gi|452208821|ref|YP_007488935.1| - 3.1e-18 66.0 0.1 4.9e-18 65.4 0.0 1.3 1 0 0 1 1 1 1 Divergent AAA domain Prefoldin_2 PF01920.15 gi|452208823|ref|YP_007488937.1| - 0.038 13.7 1.7 0.044 13.5 1.2 1.0 1 0 0 1 1 1 0 Prefoldin subunit AKNA PF12443.3 gi|452208823|ref|YP_007488937.1| - 0.13 12.2 1.0 0.13 12.3 0.7 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor Pcc1 PF09341.5 gi|452208824|ref|YP_007488938.1| - 0.011 15.7 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 Transcription factor Pcc1 Cas_Csy3 PF09615.5 gi|452208824|ref|YP_007488938.1| - 0.048 12.7 0.0 0.048 12.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy3) DHH PF01368.15 gi|452208826|ref|YP_007488940.1| - 1e-15 57.6 0.1 1.8e-15 56.8 0.1 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|452208826|ref|YP_007488940.1| - 6.3e-13 48.2 0.3 2.4e-12 46.3 0.2 2.1 1 0 0 1 1 1 1 DHHA1 domain Lactonase PF10282.4 gi|452208827|ref|YP_007488941.1| - 3.6e-16 59.1 8.5 4.8e-07 29.1 0.3 4.2 1 1 3 4 4 4 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452208827|ref|YP_007488941.1| - 1.4e-11 43.2 7.4 2.5e-06 26.0 0.5 3.1 1 1 2 3 3 3 3 Cytochrome D1 heme domain Arylesterase PF01731.15 gi|452208827|ref|YP_007488941.1| - 9.9e-08 31.8 9.4 4.7 7.2 0.0 6.3 1 1 4 6 6 6 4 Arylesterase SGL PF08450.7 gi|452208827|ref|YP_007488941.1| - 2.4e-07 30.4 11.0 0.002 17.5 0.5 4.2 2 1 4 6 6 6 5 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|452208827|ref|YP_007488941.1| - 2.3e-05 24.1 24.1 1.2 9.2 0.1 7.7 7 0 0 7 7 7 4 NHL repeat Str_synth PF03088.11 gi|452208827|ref|YP_007488941.1| - 0.0001 22.2 0.6 25 4.9 0.0 5.7 4 1 2 6 6 6 0 Strictosidine synthase PD40 PF07676.7 gi|452208827|ref|YP_007488941.1| - 0.0001 21.8 2.0 63 3.3 0.0 6.1 6 0 0 6 6 6 0 WD40-like Beta Propeller Repeat DUF3312 PF11768.3 gi|452208827|ref|YP_007488941.1| - 0.00037 18.8 1.4 0.036 12.2 0.2 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF3312) P_proprotein PF01483.15 gi|452208827|ref|YP_007488941.1| - 0.0059 16.3 1.6 28 4.5 0.0 4.8 4 1 1 5 5 5 0 Proprotein convertase P-domain Big_3_4 PF13754.1 gi|452208829|ref|YP_007488943.1| - 2.2e-05 24.6 3.6 9.5e-05 22.6 0.5 2.9 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 3) He_PIG PF05345.7 gi|452208829|ref|YP_007488943.1| - 0.0021 18.0 1.0 0.01 15.8 0.1 2.5 3 0 0 3 3 3 1 Putative Ig domain Big_3_4 PF13754.1 gi|452208831|ref|YP_007488945.1| - 6.6e-12 45.5 12.2 0.0039 17.4 0.1 6.4 6 0 0 6 6 6 3 Bacterial Ig-like domain (group 3) Big_3_2 PF12245.3 gi|452208831|ref|YP_007488945.1| - 1.8e-06 27.3 1.4 0.2 11.2 0.0 4.1 4 0 0 4 4 4 3 Bacterial Ig-like domain (group 3) SWM_repeat PF13753.1 gi|452208831|ref|YP_007488945.1| - 1.6e-05 24.1 11.2 0.00059 18.9 0.1 3.1 2 1 1 3 3 3 3 Putative flagellar system-associated repeat COG2 PF06148.6 gi|452208832|ref|YP_007488946.1| - 7e-05 22.7 0.1 0.00015 21.5 0.1 1.5 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF2303 PF10065.4 gi|452208832|ref|YP_007488946.1| - 0.066 12.0 0.2 0.11 11.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) DUF4559 PF15112.1 gi|452208832|ref|YP_007488946.1| - 0.09 11.9 3.2 0.15 11.2 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Thi4 PF01946.12 gi|452208834|ref|YP_007488948.1| - 2.2e-81 272.3 0.3 2.6e-81 272.1 0.2 1.0 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.2 gi|452208834|ref|YP_007488948.1| - 3.3e-06 26.4 1.0 6.8e-06 25.4 0.7 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|452208834|ref|YP_007488948.1| - 5.8e-06 26.2 0.2 1.4e-05 25.0 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|452208834|ref|YP_007488948.1| - 3.7e-05 22.7 2.9 0.00024 20.1 0.8 2.1 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|452208834|ref|YP_007488948.1| - 6.3e-05 22.9 0.9 8.3e-05 22.5 0.6 1.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|452208834|ref|YP_007488948.1| - 0.00022 20.2 2.6 0.0059 15.5 0.6 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452208834|ref|YP_007488948.1| - 0.00037 19.1 0.1 0.00049 18.6 0.1 1.3 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.14 gi|452208834|ref|YP_007488948.1| - 0.0018 17.4 0.1 0.0027 16.8 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.17 gi|452208834|ref|YP_007488948.1| - 0.028 13.2 0.8 0.044 12.6 0.6 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|452208834|ref|YP_007488948.1| - 0.035 14.5 0.4 0.086 13.2 0.3 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|452208834|ref|YP_007488948.1| - 0.078 11.8 0.7 0.13 11.1 0.2 1.5 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_7 PF13241.1 gi|452208834|ref|YP_007488948.1| - 0.11 12.7 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding META PF03724.11 gi|452208836|ref|YP_007488950.1| - 1.6e-14 53.5 0.0 2.4e-14 52.9 0.0 1.3 1 0 0 1 1 1 1 META domain Lipocalin_4 PF13648.1 gi|452208836|ref|YP_007488950.1| - 0.0096 16.5 0.0 0.016 15.7 0.0 1.4 1 0 0 1 1 1 1 Lipocalin-like domain OAD_gamma PF04277.8 gi|452208836|ref|YP_007488950.1| - 0.17 12.2 0.8 0.77 10.1 0.6 2.0 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TOBE PF03459.12 gi|452208838|ref|YP_007488952.1| - 7e-20 70.9 0.0 7.6e-20 70.7 0.0 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.5 gi|452208838|ref|YP_007488952.1| - 0.026 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 TOBE domain Trypan_PARP PF05887.6 gi|452208839|ref|YP_007488953.1| - 0.0043 16.8 22.1 0.0045 16.8 15.3 1.1 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) PD-C2-AF1 PF09310.5 gi|452208839|ref|YP_007488953.1| - 1.8 7.6 6.7 1.8 7.6 4.7 1.1 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 PLRV_ORF5 PF01690.12 gi|452208839|ref|YP_007488953.1| - 2.7 7.0 23.5 3 6.8 16.3 1.0 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein TIR_2 PF13676.1 gi|452208840|ref|YP_007488954.1| - 1.5e-09 37.9 0.0 2.5e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 TIR domain CpXC PF14353.1 gi|452208840|ref|YP_007488954.1| - 0.0011 18.9 0.7 0.0062 16.4 0.7 1.9 1 1 1 2 2 2 2 CpXC protein PyrI_C PF02748.10 gi|452208840|ref|YP_007488954.1| - 0.011 15.1 3.5 0.62 9.5 0.2 2.3 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Cys_rich_CPXG PF14255.1 gi|452208840|ref|YP_007488954.1| - 0.011 15.5 2.1 0.044 13.5 0.1 2.2 2 0 0 2 2 2 0 Cysteine-rich CPXCG DUF866 PF05907.8 gi|452208840|ref|YP_007488954.1| - 0.02 14.4 0.1 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) zf-Di19 PF05605.7 gi|452208840|ref|YP_007488954.1| - 0.043 13.9 1.1 0.53 10.4 0.1 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-ribbon_3 PF13248.1 gi|452208840|ref|YP_007488954.1| - 0.083 12.1 2.7 1 8.6 2.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|452208840|ref|YP_007488954.1| - 0.1 12.1 0.1 3.2 7.4 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-FCS PF06467.9 gi|452208840|ref|YP_007488954.1| - 0.11 12.1 0.4 11 5.8 0.0 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zinc_ribbon_4 PF13717.1 gi|452208840|ref|YP_007488954.1| - 0.11 12.1 0.1 5.9 6.6 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|452208840|ref|YP_007488954.1| - 0.12 12.7 0.4 0.55 10.5 0.5 1.6 1 1 1 2 2 2 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.1 gi|452208840|ref|YP_007488954.1| - 0.15 11.6 3.2 1 8.9 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-CHCC PF10276.4 gi|452208840|ref|YP_007488954.1| - 0.19 11.6 1.6 3.7 7.4 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger domain zf-BED PF02892.10 gi|452208840|ref|YP_007488954.1| - 0.4 10.4 5.0 1.4 8.7 0.1 2.5 2 1 1 3 3 3 0 BED zinc finger zf-C4_ClpX PF06689.8 gi|452208840|ref|YP_007488954.1| - 0.45 10.0 2.5 6.3 6.4 1.1 2.9 2 1 0 2 2 2 0 ClpX C4-type zinc finger Zn_ribbon_recom PF13408.1 gi|452208840|ref|YP_007488954.1| - 0.56 10.5 2.4 10 6.4 2.2 2.3 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2HC_2 PF13913.1 gi|452208840|ref|YP_007488954.1| - 0.96 9.1 3.0 4.7 6.9 0.1 2.5 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zinc_ribbon_6 PF14599.1 gi|452208842|ref|YP_007488956.1| - 0.19 11.5 1.4 0.89 9.3 1.0 1.9 1 1 0 1 1 1 0 Zinc-ribbon Zn-ribbon_8 PF09723.5 gi|452208842|ref|YP_007488956.1| - 0.26 11.2 3.5 0.36 10.8 2.4 1.2 1 0 0 1 1 1 0 Zinc ribbon domain DUF2795 PF11387.3 gi|452208843|ref|YP_007488957.1| - 1.9e-19 69.2 0.2 2.3e-19 68.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DDE_Tnp_2 PF04693.7 gi|452208843|ref|YP_007488957.1| - 0.085 11.8 0.0 0.096 11.6 0.0 1.0 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 DUF3461 PF11944.3 gi|452208843|ref|YP_007488957.1| - 0.09 12.6 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3461) Na_Ca_ex PF01699.19 gi|452208844|ref|YP_007488958.1| - 1.4e-57 193.2 37.5 2.5e-30 104.9 8.2 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein UPF0233 PF06781.7 gi|452208844|ref|YP_007488958.1| - 0.1 12.1 0.7 3.2 7.4 0.4 2.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0233) CTP_transf_1 PF01148.15 gi|452208846|ref|YP_007488960.1| - 4.2e-12 46.2 11.8 9.2e-12 45.1 8.2 1.6 1 1 0 1 1 1 1 Cytidylyltransferase family Polysacc_synt_C PF14667.1 gi|452208846|ref|YP_007488960.1| - 0.056 13.2 0.6 0.056 13.2 0.4 2.9 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain Sulfate_tra_GLY PF13792.1 gi|452208846|ref|YP_007488960.1| - 0.21 11.2 2.6 0.37 10.4 0.3 2.5 2 1 0 2 2 2 0 Sulfate transporter N-terminal domain with GLY motif DUF543 PF04418.7 gi|452208846|ref|YP_007488960.1| - 2.6 8.0 4.2 2.5 8.1 0.2 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF543) tRNA-synt_2c PF01411.14 gi|452208847|ref|YP_007488961.1| - 2.6e-14 52.4 0.0 4.1e-14 51.7 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|452208847|ref|YP_007488961.1| - 4e-12 45.8 0.3 7e-12 45.0 0.2 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Nudix_N PF12535.3 gi|452208847|ref|YP_007488961.1| - 0.016 14.6 0.5 0.056 12.9 0.0 2.0 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal NosD PF05048.8 gi|452208848|ref|YP_007488962.1| - 1.8e-36 125.4 7.4 7.4e-36 123.4 5.1 2.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Peptidase_S8 PF00082.17 gi|452208848|ref|YP_007488962.1| - 5.5e-21 74.9 0.0 2.9e-20 72.5 0.0 2.1 1 1 0 1 1 1 1 Subtilase family Beta_helix PF13229.1 gi|452208848|ref|YP_007488962.1| - 3e-09 36.8 9.0 3e-09 36.8 6.3 3.5 3 0 0 3 3 3 1 Right handed beta helix region DUF948 PF06103.6 gi|452208849|ref|YP_007488963.1| - 0.0092 15.8 2.9 2.5 8.0 0.1 3.8 3 1 0 3 3 3 1 Bacterial protein of unknown function (DUF948) ATG16 PF08614.6 gi|452208849|ref|YP_007488963.1| - 0.058 13.2 27.8 0.73 9.6 9.1 2.9 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) COMP PF11598.3 gi|452208849|ref|YP_007488963.1| - 0.2 11.7 0.2 0.2 11.7 0.1 3.3 4 0 0 4 4 4 0 Cartilage oligomeric matrix protein DUF2730 PF10805.3 gi|452208849|ref|YP_007488963.1| - 0.71 9.6 0.0 0.71 9.6 0.0 4.1 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) DUF1664 PF07889.7 gi|452208849|ref|YP_007488963.1| - 0.71 9.6 5.0 1 9.2 0.4 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) Atg14 PF10186.4 gi|452208849|ref|YP_007488963.1| - 1.6 7.5 24.7 0.08 11.8 3.0 2.8 2 1 1 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 Laminin_II PF06009.7 gi|452208849|ref|YP_007488963.1| - 4.4 7.0 15.7 7.6 6.2 0.1 4.0 3 1 1 4 4 4 0 Laminin Domain II Fib_alpha PF08702.5 gi|452208849|ref|YP_007488963.1| - 7.1 6.7 13.5 2.3 8.3 1.5 3.5 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family MS_channel PF00924.13 gi|452208850|ref|YP_007488964.1| - 5.4e-50 169.5 0.5 9e-50 168.8 0.4 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel TM_helix PF05552.7 gi|452208850|ref|YP_007488964.1| - 0.075 12.7 1.8 0.1 12.2 0.2 2.0 2 0 0 2 2 2 0 Conserved TM helix DUF498 PF04430.9 gi|452208851|ref|YP_007488965.1| - 1.3e-15 56.8 0.0 1.5e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) AIM24 PF01987.12 gi|452208852|ref|YP_007488966.1| - 3.5e-45 154.0 0.0 4e-45 153.8 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 dTMP_synthase PF02593.9 gi|452208853|ref|YP_007488967.1| - 2.3e-76 255.9 0.0 2.6e-76 255.7 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase Fer4 PF00037.22 gi|452208854|ref|YP_007488968.1| - 8.1e-15 53.7 16.7 1e-07 31.2 3.3 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452208854|ref|YP_007488968.1| - 2.3e-11 43.5 2.3 6.5e-05 22.8 0.0 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452208854|ref|YP_007488968.1| - 4.8e-10 38.8 14.2 4.5e-05 23.1 1.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208854|ref|YP_007488968.1| - 5e-10 39.0 32.0 1.9e-07 30.7 12.2 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452208854|ref|YP_007488968.1| - 5.6e-10 39.3 26.0 2.6e-07 30.7 11.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208854|ref|YP_007488968.1| - 9.7e-10 37.7 16.9 8.5e-05 22.2 2.6 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452208854|ref|YP_007488968.1| - 1.3e-09 38.3 15.1 2.4e-09 37.4 10.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452208854|ref|YP_007488968.1| - 1e-08 35.3 5.5 0.0013 18.9 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452208854|ref|YP_007488968.1| - 3.3e-08 33.8 8.7 7.9e-05 23.0 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain NIL PF09383.5 gi|452208854|ref|YP_007488968.1| - 5.7e-07 29.0 0.0 7.2e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 NIL domain Fer4_21 PF14697.1 gi|452208854|ref|YP_007488968.1| - 1.7e-06 27.7 15.3 0.0048 16.7 2.0 2.2 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208854|ref|YP_007488968.1| - 1.9e-06 28.4 12.9 0.0012 19.5 1.7 2.4 1 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.1 gi|452208854|ref|YP_007488968.1| - 5e-06 26.8 13.5 0.0047 17.2 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|452208854|ref|YP_007488968.1| - 1.9e-05 24.5 18.1 0.0013 18.9 2.5 2.9 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452208854|ref|YP_007488968.1| - 0.00011 22.4 23.2 0.02 15.4 3.9 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452208854|ref|YP_007488968.1| - 0.00032 20.5 4.4 0.00061 19.6 3.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452208854|ref|YP_007488968.1| - 0.001 19.5 15.8 0.12 12.9 3.1 2.7 2 1 1 3 3 3 2 4Fe-4S single cluster domain DUF39 PF01837.11 gi|452208855|ref|YP_007488969.1| - 3.1e-149 496.2 0.2 4.1e-149 495.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF39 CBS PF00571.23 gi|452208855|ref|YP_007488969.1| - 7.4e-26 89.6 0.1 7e-12 44.9 0.0 2.6 2 0 0 2 2 2 2 CBS domain CTP_transf_2 PF01467.21 gi|452208856|ref|YP_007488970.1| - 3.1e-19 69.5 0.0 4.4e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|452208856|ref|YP_007488970.1| - 0.048 13.2 0.1 0.14 11.7 0.1 1.7 1 1 0 2 2 2 0 FAD synthetase Urm1 PF09138.6 gi|452208856|ref|YP_007488970.1| - 0.05 13.7 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) Aminotran_1_2 PF00155.16 gi|452208857|ref|YP_007488971.1| - 3.5e-66 223.6 0.0 4e-66 223.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|452208857|ref|YP_007488971.1| - 0.0051 15.1 0.0 0.008 14.5 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|452208857|ref|YP_007488971.1| - 0.047 12.4 0.0 0.068 11.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V Peptidase_S8 PF00082.17 gi|452208857|ref|YP_007488971.1| - 0.087 11.9 0.0 0.12 11.4 0.0 1.5 1 1 0 1 1 1 0 Subtilase family Rsbr_N PF08678.5 gi|452208857|ref|YP_007488971.1| - 0.13 12.1 0.0 2.6 7.9 0.0 2.4 2 1 1 3 3 3 0 Rsbr N terminal DMRL_synthase PF00885.14 gi|452208858|ref|YP_007488972.1| - 7.8e-33 113.1 0.2 8.4e-33 113.0 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.14 gi|452208859|ref|YP_007488973.1| - 3e-21 75.5 0.1 3.4e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DUF2428 PF10350.4 gi|452208859|ref|YP_007488973.1| - 0.11 11.4 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative death-receptor fusion protein (DUF2428) DUF3667 PF12412.3 gi|452208859|ref|YP_007488973.1| - 0.14 11.4 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) Aminotran_5 PF00266.14 gi|452208860|ref|YP_007488974.1| - 3.5e-41 141.1 0.0 4.1e-41 140.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|452208860|ref|YP_007488974.1| - 0.00019 20.5 0.0 0.00043 19.4 0.0 1.5 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|452208860|ref|YP_007488974.1| - 0.011 14.9 0.0 0.021 13.9 0.0 1.5 1 1 0 1 1 1 0 Beta-eliminating lyase CBS PF00571.23 gi|452208861|ref|YP_007488975.1| - 2.6e-19 68.7 4.6 5.8e-11 41.9 0.4 2.5 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.17 gi|452208861|ref|YP_007488975.1| - 1.7e-15 56.5 0.4 1.4e-14 53.6 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.1 gi|452208861|ref|YP_007488975.1| - 2.9e-13 49.8 0.1 9e-13 48.2 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|452208861|ref|YP_007488975.1| - 9.2e-12 44.8 0.1 2.8e-11 43.3 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|452208861|ref|YP_007488975.1| - 2.8e-05 23.6 0.1 5.5e-05 22.7 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452208861|ref|YP_007488975.1| - 3.3e-05 23.9 0.0 0.00022 21.3 0.0 2.2 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|452208861|ref|YP_007488975.1| - 0.00033 20.3 0.1 0.0016 18.2 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|452208861|ref|YP_007488975.1| - 0.0069 15.7 0.4 0.1 12.0 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|452208861|ref|YP_007488975.1| - 0.036 13.7 0.0 0.21 11.2 0.0 2.2 2 0 0 2 2 2 0 MarR family LacI PF00356.16 gi|452208861|ref|YP_007488975.1| - 0.077 12.6 2.3 4.5 6.9 0.1 3.0 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR PF01047.17 gi|452208861|ref|YP_007488975.1| - 0.089 12.5 0.2 0.74 9.5 0.0 2.4 3 0 0 3 3 3 0 MarR family HTH_23 PF13384.1 gi|452208861|ref|YP_007488975.1| - 0.15 11.7 0.0 6 6.6 0.0 2.7 2 0 0 2 2 2 0 Homeodomain-like domain AAA PF00004.24 gi|452208862|ref|YP_007488976.1| - 1.7e-97 322.6 0.0 5.5e-48 162.5 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|452208862|ref|YP_007488976.1| - 3e-25 87.9 0.0 2.3e-24 85.1 0.0 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.12 gi|452208862|ref|YP_007488976.1| - 9.9e-19 66.7 1.6 4e-18 64.7 0.2 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.1 gi|452208862|ref|YP_007488976.1| - 1e-14 54.9 0.0 9.1e-07 29.0 0.0 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|452208862|ref|YP_007488976.1| - 1.9e-14 53.8 0.1 8.3e-05 22.7 0.0 4.4 2 2 0 2 2 2 2 AAA domain AAA_2 PF07724.9 gi|452208862|ref|YP_007488976.1| - 4.7e-14 52.6 0.0 6.3e-08 32.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|452208862|ref|YP_007488976.1| - 6e-14 51.6 0.0 4.6e-06 25.8 0.0 2.5 2 1 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 gi|452208862|ref|YP_007488976.1| - 4.6e-13 49.1 0.0 5.4e-07 29.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|452208862|ref|YP_007488976.1| - 2.4e-12 46.7 0.8 8.6e-05 22.2 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|452208862|ref|YP_007488976.1| - 1.3e-11 45.4 0.0 1.1e-05 26.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|452208862|ref|YP_007488976.1| - 3.8e-11 43.0 0.0 2.2e-05 24.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.7 gi|452208862|ref|YP_007488976.1| - 1.3e-10 40.7 0.0 2.7e-05 23.3 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin TIP49 PF06068.8 gi|452208862|ref|YP_007488976.1| - 3.4e-10 39.2 0.0 0.00034 19.4 0.0 2.3 2 0 0 2 2 2 2 TIP49 C-terminus IstB_IS21 PF01695.12 gi|452208862|ref|YP_007488976.1| - 4.5e-10 39.2 0.1 0.00047 19.6 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_19 PF13245.1 gi|452208862|ref|YP_007488976.1| - 9.6e-10 38.0 1.6 0.0011 18.7 0.1 3.0 2 0 0 2 2 2 2 Part of AAA domain NACHT PF05729.7 gi|452208862|ref|YP_007488976.1| - 2.2e-09 37.1 0.2 0.058 13.0 0.0 4.2 3 1 1 4 4 4 2 NACHT domain AAA_25 PF13481.1 gi|452208862|ref|YP_007488976.1| - 1.3e-08 34.4 2.5 0.0015 17.9 0.0 3.4 2 1 1 3 3 3 2 AAA domain Sigma54_activat PF00158.21 gi|452208862|ref|YP_007488976.1| - 2.8e-08 33.4 0.0 0.0055 16.1 0.0 3.4 2 2 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|452208862|ref|YP_007488976.1| - 1.1e-07 31.2 0.5 0.012 14.7 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_18 PF13238.1 gi|452208862|ref|YP_007488976.1| - 1.3e-07 31.9 0.0 0.021 15.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.22 gi|452208862|ref|YP_007488976.1| - 2.1e-07 31.3 0.0 0.0074 16.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RNA_helicase PF00910.17 gi|452208862|ref|YP_007488976.1| - 5.3e-07 29.7 0.0 0.043 13.9 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.1 gi|452208862|ref|YP_007488976.1| - 5.4e-07 29.7 0.0 0.017 15.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain Sigma54_activ_2 PF14532.1 gi|452208862|ref|YP_007488976.1| - 1e-06 28.8 0.0 0.059 13.4 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.12 gi|452208862|ref|YP_007488976.1| - 2.5e-06 26.5 0.0 0.017 13.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_24 PF13479.1 gi|452208862|ref|YP_007488976.1| - 2.6e-06 27.1 0.0 0.024 14.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain Arch_ATPase PF01637.13 gi|452208862|ref|YP_007488976.1| - 1.2e-05 25.1 0.0 0.24 11.0 0.0 3.6 2 2 1 3 3 3 2 Archaeal ATPase NB-ARC PF00931.17 gi|452208862|ref|YP_007488976.1| - 2.1e-05 23.5 0.0 0.088 11.6 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain KaiC PF06745.8 gi|452208862|ref|YP_007488976.1| - 2.2e-05 23.6 0.2 0.59 9.2 0.0 3.4 2 1 0 3 3 3 2 KaiC PhoH PF02562.11 gi|452208862|ref|YP_007488976.1| - 2.4e-05 23.6 1.6 0.24 10.6 0.0 3.5 5 0 0 5 5 2 2 PhoH-like protein AAA_3 PF07726.6 gi|452208862|ref|YP_007488976.1| - 4.5e-05 23.0 0.0 0.32 10.5 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ResIII PF04851.10 gi|452208862|ref|YP_007488976.1| - 0.00013 21.8 0.0 0.19 11.5 0.0 2.3 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DUF2075 PF09848.4 gi|452208862|ref|YP_007488976.1| - 0.00015 20.9 0.0 0.41 9.5 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.1 gi|452208862|ref|YP_007488976.1| - 0.0002 21.0 0.0 0.35 10.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain SKI PF01202.17 gi|452208862|ref|YP_007488976.1| - 0.00051 19.9 0.1 1.5 8.6 0.0 3.1 3 0 0 3 3 3 1 Shikimate kinase UPF0079 PF02367.12 gi|452208862|ref|YP_007488976.1| - 0.00057 19.5 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 DUF815 PF05673.8 gi|452208862|ref|YP_007488976.1| - 0.00095 18.1 0.0 1.2 7.9 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Guanylate_kin PF00625.16 gi|452208862|ref|YP_007488976.1| - 0.00095 18.6 0.2 9.9 5.5 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase Bac_DnaA PF00308.13 gi|452208862|ref|YP_007488976.1| - 0.00097 18.8 0.0 1.5 8.4 0.0 2.9 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_30 PF13604.1 gi|452208862|ref|YP_007488976.1| - 0.0013 18.3 0.0 1.2 8.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain KAP_NTPase PF07693.9 gi|452208862|ref|YP_007488976.1| - 0.0021 17.1 0.2 1.5 7.7 0.0 3.3 2 2 2 4 4 4 1 KAP family P-loop domain ATP-synt_ab PF00006.20 gi|452208862|ref|YP_007488976.1| - 0.0024 17.4 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain NTPase_1 PF03266.10 gi|452208862|ref|YP_007488976.1| - 0.0039 16.9 0.1 4.1 7.0 0.0 3.3 2 1 1 3 3 3 0 NTPase T2SE PF00437.15 gi|452208862|ref|YP_007488976.1| - 0.0055 15.6 0.0 3.7 6.3 0.0 2.7 3 0 0 3 3 2 0 Type II/IV secretion system protein AFG1_ATPase PF03969.11 gi|452208862|ref|YP_007488976.1| - 0.017 13.9 0.0 2.1 7.0 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase CPT PF07931.7 gi|452208862|ref|YP_007488976.1| - 0.018 14.7 0.0 3.5 7.2 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein Vps4_C PF09336.5 gi|452208862|ref|YP_007488976.1| - 0.023 14.6 0.0 8 6.4 0.0 3.1 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain AAA_23 PF13476.1 gi|452208862|ref|YP_007488976.1| - 0.023 15.0 0.0 7.5 6.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.13 gi|452208862|ref|YP_007488976.1| - 0.037 13.5 0.0 3.1 7.2 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_29 PF13555.1 gi|452208862|ref|YP_007488976.1| - 0.053 13.0 0.0 15 5.2 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain cobW PF02492.14 gi|452208862|ref|YP_007488976.1| - 0.07 12.5 0.1 13 5.1 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Torsin PF06309.6 gi|452208862|ref|YP_007488976.1| - 0.075 12.9 0.0 6.9 6.5 0.0 2.4 2 0 0 2 2 2 0 Torsin PduV-EutP PF10662.4 gi|452208862|ref|YP_007488976.1| - 0.1 12.1 0.0 14 5.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation KTI12 PF08433.5 gi|452208862|ref|YP_007488976.1| - 0.16 11.1 0.0 18 4.4 0.0 2.4 2 0 0 2 2 2 0 Chromatin associated protein KTI12 IPT PF01745.11 gi|452208862|ref|YP_007488976.1| - 0.18 10.9 0.0 16 4.5 0.0 2.4 2 0 0 2 2 2 0 Isopentenyl transferase AAA_10 PF12846.2 gi|452208862|ref|YP_007488976.1| - 0.19 11.1 0.7 20 4.5 0.0 2.8 3 0 0 3 3 3 0 AAA-like domain DAP3 PF10236.4 gi|452208862|ref|YP_007488976.1| - 0.22 10.4 0.0 19 4.0 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 FMN_red PF03358.10 gi|452208863|ref|YP_007488977.1| - 2.3e-17 62.9 0.0 3e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452208863|ref|YP_007488977.1| - 9.3e-05 22.0 0.0 0.00028 20.4 0.0 1.8 1 1 0 1 1 1 1 Flavodoxin-like fold SUKH_5 PF14567.1 gi|452208864|ref|YP_007488978.1| - 0.05 13.0 0.5 0.053 12.9 0.3 1.0 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Takusan PF04822.8 gi|452208864|ref|YP_007488978.1| - 0.16 11.7 1.1 0.17 11.6 0.8 1.0 1 0 0 1 1 1 0 Takusan HTH_45 PF14947.1 gi|452208865|ref|YP_007488979.1| - 2.4e-23 81.7 1.0 2.5e-23 81.6 0.7 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.15 gi|452208865|ref|YP_007488979.1| - 0.01 15.9 0.1 0.016 15.2 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator AAA PF00004.24 gi|452208866|ref|YP_007488980.1| - 1e-10 41.9 0.0 2.6e-10 40.6 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|452208866|ref|YP_007488980.1| - 2e-09 36.7 0.0 0.00092 18.0 0.0 2.2 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|452208866|ref|YP_007488980.1| - 2.1e-07 31.1 0.8 0.0057 16.8 0.0 3.5 2 2 1 3 3 3 2 AAA domain RuvB_N PF05496.7 gi|452208866|ref|YP_007488980.1| - 1.2e-05 24.4 0.0 2.5e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|452208866|ref|YP_007488980.1| - 7.7e-05 22.7 0.1 0.00056 19.9 0.0 2.3 2 1 1 3 3 3 1 AAA ATPase domain AAA_14 PF13173.1 gi|452208866|ref|YP_007488980.1| - 0.00047 20.0 0.0 0.0011 18.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.1 gi|452208866|ref|YP_007488980.1| - 0.01 15.4 0.0 0.041 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain IPT PF01745.11 gi|452208866|ref|YP_007488980.1| - 0.013 14.7 0.0 0.04 13.1 0.0 1.8 2 0 0 2 2 2 0 Isopentenyl transferase IstB_IS21 PF01695.12 gi|452208866|ref|YP_007488980.1| - 0.015 14.7 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Zeta_toxin PF06414.7 gi|452208866|ref|YP_007488980.1| - 0.041 12.9 0.0 0.077 12.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_17 PF13207.1 gi|452208866|ref|YP_007488980.1| - 0.046 14.5 0.2 0.17 12.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|452208866|ref|YP_007488980.1| - 0.048 13.0 0.2 0.44 9.9 0.0 2.2 1 1 1 2 2 2 0 AAA domain DUF815 PF05673.8 gi|452208866|ref|YP_007488980.1| - 0.055 12.3 0.0 0.09 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF258 PF03193.11 gi|452208866|ref|YP_007488980.1| - 0.075 12.2 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 RNA_helicase PF00910.17 gi|452208866|ref|YP_007488980.1| - 0.11 12.6 0.0 0.27 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase DEAD PF00270.24 gi|452208866|ref|YP_007488980.1| - 0.13 11.7 0.0 5.5 6.4 0.0 2.5 3 0 0 3 3 3 0 DEAD/DEAH box helicase PTA_PTB PF01515.14 gi|452208867|ref|YP_007488981.1| - 0.00031 19.9 0.0 0.6 9.1 0.0 2.3 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase MtrA PF04208.9 gi|452208868|ref|YP_007488982.1| - 1.5e-54 184.1 0.1 1.9e-54 183.7 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrH PF02007.13 gi|452208869|ref|YP_007488983.1| - 7.3e-143 474.9 0.2 8.3e-143 474.7 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit Prok-RING_2 PF14445.1 gi|452208872|ref|YP_007488986.1| - 0.0014 18.5 8.5 0.0035 17.2 5.9 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 2 zf-HIT PF04438.11 gi|452208872|ref|YP_007488986.1| - 0.018 14.7 6.1 0.018 14.7 4.2 2.2 1 1 1 2 2 2 0 HIT zinc finger FYVE PF01363.16 gi|452208872|ref|YP_007488986.1| - 0.034 14.0 14.1 0.079 12.8 9.8 1.8 1 1 0 1 1 1 0 FYVE zinc finger zf-B_box PF00643.19 gi|452208872|ref|YP_007488986.1| - 0.58 10.1 11.8 0.055 13.3 4.6 1.8 1 1 1 2 2 2 0 B-box zinc finger zf-C3HC4_3 PF13920.1 gi|452208872|ref|YP_007488986.1| - 2.1 8.0 12.7 2.9 7.6 8.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Siva PF05458.7 gi|452208872|ref|YP_007488986.1| - 2.9 7.4 7.6 2.9 7.4 5.3 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-C2H2 PF00096.21 gi|452208872|ref|YP_007488986.1| - 3.9 8.0 8.7 25 5.4 2.7 2.8 2 1 0 2 2 2 0 Zinc finger, C2H2 type DZR PF12773.2 gi|452208872|ref|YP_007488986.1| - 4.5 7.1 11.5 15 5.4 8.0 2.0 1 1 0 1 1 1 0 Double zinc ribbon ProRS-C_1 PF09180.6 gi|452208872|ref|YP_007488986.1| - 9.6 6.2 7.1 22 5.0 0.2 2.4 1 1 1 2 2 2 0 Prolyl-tRNA synthetase, C-terminal ILVD_EDD PF00920.16 gi|452208873|ref|YP_007488987.1| - 2.2e-224 745.7 0.8 2.5e-224 745.5 0.6 1.0 1 0 0 1 1 1 1 Dehydratase family Uroplakin_II PF07353.7 gi|452208873|ref|YP_007488987.1| - 0.044 13.1 0.1 0.6 9.4 0.0 2.2 2 0 0 2 2 2 0 Uroplakin II PAS_3 PF08447.6 gi|452208874|ref|YP_007488988.1| - 3.3e-50 168.1 2.9 2.4e-16 59.5 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.1 gi|452208874|ref|YP_007488988.1| - 1.9e-19 69.9 2.9 4.9e-05 23.6 0.2 3.4 3 0 0 3 3 3 3 PAS domain PAS PF00989.19 gi|452208874|ref|YP_007488988.1| - 2.9e-12 46.3 0.3 0.00033 20.3 0.0 3.4 3 0 0 3 3 3 3 PAS fold GAF_2 PF13185.1 gi|452208874|ref|YP_007488988.1| - 8.5e-11 42.5 0.0 2e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.5 gi|452208874|ref|YP_007488988.1| - 7.4e-09 35.6 0.0 0.05 13.6 0.0 4.0 4 0 0 4 4 4 2 PAS fold PAS_11 PF14598.1 gi|452208874|ref|YP_007488988.1| - 1.1e-06 28.6 0.0 0.16 11.9 0.0 3.3 3 0 0 3 3 3 2 PAS domain GAF_3 PF13492.1 gi|452208874|ref|YP_007488988.1| - 0.00013 22.0 0.0 0.00034 20.7 0.0 1.7 1 0 0 1 1 1 1 GAF domain GAF PF01590.21 gi|452208874|ref|YP_007488988.1| - 0.00086 19.4 0.0 0.0016 18.5 0.0 1.4 1 0 0 1 1 1 1 GAF domain MoaE PF02391.12 gi|452208874|ref|YP_007488988.1| - 0.0063 16.3 1.6 6.3 6.6 0.0 3.7 4 0 0 4 4 4 1 MoaE protein Thr_dehydrat_C PF00585.13 gi|452208874|ref|YP_007488988.1| - 0.072 12.6 0.9 4.8 6.8 0.0 3.8 3 1 1 4 4 4 0 C-terminal regulatory domain of Threonine dehydratase Mononeg_mRNAcap PF14318.1 gi|452208874|ref|YP_007488988.1| - 0.094 11.7 0.1 4.7 6.1 0.0 2.4 2 0 0 2 2 2 0 Mononegavirales mRNA-capping region V Flavodoxin_1 PF00258.20 gi|452208875|ref|YP_007488989.1| - 2.3e-14 53.5 0.0 4.6e-14 52.6 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|452208875|ref|YP_007488989.1| - 9.7e-08 32.1 0.0 1.5e-07 31.5 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.2 gi|452208875|ref|YP_007488989.1| - 4.7e-06 26.1 0.0 6.6e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|452208875|ref|YP_007488989.1| - 7.1e-05 22.2 0.1 0.0004 19.7 0.1 2.1 1 1 0 1 1 1 1 Flavodoxin DUF1724 PF08350.5 gi|452208877|ref|YP_007488991.1| - 6.6e-23 80.0 0.4 1.5e-22 78.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452208877|ref|YP_007488991.1| - 0.008 15.8 0.2 0.015 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|452208877|ref|YP_007488991.1| - 0.0097 16.2 0.1 0.019 15.2 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|452208877|ref|YP_007488991.1| - 0.011 15.3 0.5 0.027 14.1 0.3 1.7 1 0 0 1 1 1 0 HTH domain TrmB PF01978.14 gi|452208877|ref|YP_007488991.1| - 0.074 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB BRCA-2_OB3 PF09104.5 gi|452208877|ref|YP_007488991.1| - 0.087 12.6 1.0 3.1 7.6 0.0 2.3 2 0 0 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 SecA_DEAD PF07517.9 gi|452208877|ref|YP_007488991.1| - 0.15 11.3 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 SecA DEAD-like domain DUF1699 PF08004.6 gi|452208878|ref|YP_007488992.1| - 6.4e-70 232.7 0.9 7.2e-70 232.5 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|452208878|ref|YP_007488992.1| - 0.031 14.5 0.1 0.053 13.7 0.0 1.4 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|452208878|ref|YP_007488992.1| - 0.056 12.9 0.1 7.7 6.2 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region PKD PF00801.15 gi|452208882|ref|YP_007488996.1| - 1.2e-100 329.2 82.4 3.8e-19 68.1 2.9 7.5 7 0 0 7 7 7 7 PKD domain DUF1918 PF08940.6 gi|452208882|ref|YP_007488996.1| - 0.0077 15.5 0.0 3 7.2 0.0 4.6 6 0 0 6 6 6 1 Domain of unknown function (DUF1918) Dockerin_1 PF00404.13 gi|452208882|ref|YP_007488996.1| - 1 9.1 4.2 24 4.8 0.3 3.0 2 0 0 2 2 2 0 Dockerin type I repeat DUF1724 PF08350.5 gi|452208885|ref|YP_007488999.1| - 1.7e-22 78.6 0.9 3.1e-22 77.8 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) ASL_C2 PF14698.1 gi|452208886|ref|YP_007489000.1| - 0.081 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Argininosuccinate lyase C-terminal G3P_antiterm PF04309.7 gi|452208887|ref|YP_007489001.1| - 0.056 12.4 0.0 0.056 12.4 0.0 1.0 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator DUF3458 PF11940.3 gi|452208888|ref|YP_007489002.1| - 3.4e-60 203.8 0.2 4.7e-60 203.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Peptidase_M1 PF01433.15 gi|452208888|ref|YP_007489002.1| - 3.3e-18 65.9 0.0 5.1e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M1 DUF1622 PF07784.6 gi|452208889|ref|YP_007489003.1| - 8.9e-25 86.1 0.1 1.4e-24 85.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) QueT PF06177.6 gi|452208889|ref|YP_007489003.1| - 0.026 14.5 0.3 0.031 14.2 0.2 1.1 1 0 0 1 1 1 0 QueT transporter Sdh_cyt PF01127.17 gi|452208889|ref|YP_007489003.1| - 0.12 12.2 0.5 0.2 11.4 0.4 1.4 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1622 PF07784.6 gi|452208890|ref|YP_007489004.1| - 8e-25 86.2 0.6 1.1e-24 85.8 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) PALP PF00291.20 gi|452208891|ref|YP_007489005.1| - 5.6e-72 242.5 3.2 6.5e-72 242.3 2.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme zinc_ribbon_2 PF13240.1 gi|452208891|ref|YP_007489005.1| - 0.047 13.1 2.5 0.11 12.0 1.7 1.6 1 0 0 1 1 1 0 zinc-ribbon domain tRNA-synt_1 PF00133.17 gi|452208892|ref|YP_007489006.1| - 3.3e-57 193.8 0.1 1.2e-41 142.4 0.1 2.9 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|452208892|ref|YP_007489006.1| - 5.1e-27 94.5 2.1 3.4e-12 45.7 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|452208892|ref|YP_007489006.1| - 1.2e-21 77.1 0.2 2.1e-21 76.2 0.1 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.14 gi|452208892|ref|YP_007489006.1| - 8.8e-10 38.1 0.1 3.2e-06 26.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|452208892|ref|YP_007489006.1| - 1.6e-07 30.8 0.0 2.9e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.14 gi|452208892|ref|YP_007489006.1| - 0.00033 19.6 0.0 0.00088 18.1 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.13 gi|452208892|ref|YP_007489006.1| - 0.0058 15.3 0.0 0.013 14.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) CN_hydrolase PF00795.17 gi|452208893|ref|YP_007489007.1| - 9.1e-25 87.0 0.0 1.1e-11 44.4 0.0 2.1 2 0 0 2 2 2 2 Carbon-nitrogen hydrolase PvlArgDC PF01862.11 gi|452208896|ref|YP_007489010.1| - 2.3e-60 202.9 0.0 2.6e-60 202.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DS PF01916.12 gi|452208897|ref|YP_007489011.1| - 5.7e-72 242.3 0.1 7.3e-72 242.0 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase DUF970 PF06153.6 gi|452208897|ref|YP_007489011.1| - 0.089 12.7 0.0 0.24 11.3 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF970) ArsR PF09824.4 gi|452208898|ref|YP_007489012.1| - 9.3e-61 203.8 0.1 1e-60 203.6 0.0 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator DUF387 PF04079.11 gi|452208898|ref|YP_007489012.1| - 0.0038 16.6 0.0 0.13 11.6 0.0 2.1 2 0 0 2 2 2 1 Putative transcriptional regulators (Ypuh-like) DUF3418 PF11898.3 gi|452208898|ref|YP_007489012.1| - 0.048 12.0 0.0 0.048 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Retrotrans_gag PF03732.12 gi|452208898|ref|YP_007489012.1| - 0.077 13.0 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Retrotransposon gag protein MarR_2 PF12802.2 gi|452208899|ref|YP_007489013.1| - 7.3e-11 41.5 0.1 2.8e-10 39.7 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.1 gi|452208899|ref|YP_007489013.1| - 1.7e-10 40.0 0.1 2.9e-09 36.1 0.0 2.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|452208899|ref|YP_007489013.1| - 5.7e-08 32.9 0.0 1.4e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|452208899|ref|YP_007489013.1| - 1.5e-07 31.0 0.7 2.3e-05 24.0 0.0 3.2 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain MarR PF01047.17 gi|452208899|ref|YP_007489013.1| - 5.1e-07 29.2 0.2 2.8e-06 26.9 0.0 2.3 3 0 0 3 3 3 1 MarR family HTH_45 PF14947.1 gi|452208899|ref|YP_007489013.1| - 1.7e-05 24.5 0.0 3.3e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_3 PF01381.17 gi|452208899|ref|YP_007489013.1| - 3.6e-05 23.5 0.1 0.003 17.3 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_11 PF08279.7 gi|452208899|ref|YP_007489013.1| - 0.00014 21.4 0.1 0.00032 20.2 0.1 1.7 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.15 gi|452208899|ref|YP_007489013.1| - 0.0002 21.3 0.0 0.0005 20.1 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.14 gi|452208899|ref|YP_007489013.1| - 0.00092 19.1 0.1 0.0036 17.2 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Mnd1 PF03962.10 gi|452208899|ref|YP_007489013.1| - 0.0032 17.1 0.6 0.0091 15.6 0.0 1.9 2 0 0 2 2 2 1 Mnd1 family HTH_36 PF13730.1 gi|452208899|ref|YP_007489013.1| - 0.0055 16.7 0.0 0.017 15.2 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|452208899|ref|YP_007489013.1| - 0.0057 16.2 0.0 0.013 15.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4423 PF14394.1 gi|452208899|ref|YP_007489013.1| - 0.0059 16.1 0.1 0.013 15.0 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.12 gi|452208899|ref|YP_007489013.1| - 0.012 15.2 0.1 0.029 13.9 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_28 PF13518.1 gi|452208899|ref|YP_007489013.1| - 0.018 15.0 0.0 0.083 12.9 0.0 2.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_13 PF11972.3 gi|452208899|ref|YP_007489013.1| - 0.019 14.8 0.1 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain GntR PF00392.16 gi|452208899|ref|YP_007489013.1| - 0.024 14.0 0.3 0.07 12.5 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family HTH_23 PF13384.1 gi|452208899|ref|YP_007489013.1| - 0.025 14.2 0.0 0.076 12.6 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.7 gi|452208899|ref|YP_007489013.1| - 0.032 13.8 0.0 0.096 12.2 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.15 gi|452208899|ref|YP_007489013.1| - 0.039 13.6 0.0 0.089 12.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452208899|ref|YP_007489013.1| - 0.041 13.6 0.0 0.093 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|452208899|ref|YP_007489013.1| - 0.044 13.9 0.1 0.084 13.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix EAP30 PF04157.11 gi|452208899|ref|YP_007489013.1| - 0.049 12.7 0.0 0.089 11.9 0.0 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family TrmB PF01978.14 gi|452208899|ref|YP_007489013.1| - 0.055 13.1 0.1 0.15 11.7 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB KorB PF08535.5 gi|452208899|ref|YP_007489013.1| - 0.087 12.9 0.0 0.29 11.3 0.0 1.9 1 0 0 1 1 1 0 KorB domain DUF4364 PF14277.1 gi|452208899|ref|YP_007489013.1| - 0.089 12.3 0.1 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) Metallophos_2 PF12850.2 gi|452208900|ref|YP_007489014.1| - 7.2e-11 42.1 0.0 9.5e-11 41.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.20 gi|452208903|ref|YP_007489017.1| - 2.9e-06 27.0 0.1 0.0052 16.6 0.0 2.6 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain Na_H_Exchanger PF00999.16 gi|452208904|ref|YP_007489018.1| - 1.4e-41 142.2 49.3 2e-41 141.8 34.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|452208904|ref|YP_007489018.1| - 1.4e-26 92.8 0.2 2.6e-26 91.9 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|452208904|ref|YP_007489018.1| - 4.3e-10 39.0 0.4 1.3e-09 37.5 0.1 2.0 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|452208904|ref|YP_007489018.1| - 1.6e-06 28.2 0.4 4.5e-06 26.8 0.1 1.8 2 0 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|452208904|ref|YP_007489018.1| - 3.2e-05 23.3 0.3 6.1e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_10 PF13460.1 gi|452208904|ref|YP_007489018.1| - 0.00057 19.9 0.1 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding ApbA PF02558.11 gi|452208904|ref|YP_007489018.1| - 0.001 18.5 0.1 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|452208904|ref|YP_007489018.1| - 0.0027 17.5 0.1 0.0053 16.6 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Saccharop_dh PF03435.13 gi|452208904|ref|YP_007489018.1| - 0.0044 16.0 0.3 0.0066 15.4 0.2 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase F420_oxidored PF03807.12 gi|452208904|ref|YP_007489018.1| - 0.0066 16.8 1.4 0.0085 16.4 0.2 1.9 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|452208904|ref|YP_007489018.1| - 0.0067 15.5 0.1 0.014 14.5 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|452208904|ref|YP_007489018.1| - 0.01 15.4 0.1 0.019 14.6 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|452208904|ref|YP_007489018.1| - 0.12 11.4 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain BPD_transp_1 PF00528.17 gi|452208905|ref|YP_007489019.1| - 4.4e-22 78.4 17.9 6e-22 78.0 12.3 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|452208906|ref|YP_007489020.1| - 1.5e-23 83.2 12.7 2.2e-23 82.7 8.8 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|452208908|ref|YP_007489022.1| - 2.8e-31 108.6 0.0 4.6e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452208908|ref|YP_007489022.1| - 8.5e-12 45.6 0.3 4.5e-07 30.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain CBS PF00571.23 gi|452208908|ref|YP_007489022.1| - 1.4e-06 27.9 0.0 0.017 14.9 0.0 2.7 2 0 0 2 2 2 2 CBS domain AAA_16 PF13191.1 gi|452208908|ref|YP_007489022.1| - 0.00041 20.4 0.1 0.00082 19.4 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|452208908|ref|YP_007489022.1| - 0.00086 19.0 0.0 0.0019 17.8 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_29 PF13555.1 gi|452208908|ref|YP_007489022.1| - 0.0019 17.7 0.0 0.0034 16.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|452208908|ref|YP_007489022.1| - 0.002 18.2 0.0 0.0086 16.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.1 gi|452208908|ref|YP_007489022.1| - 0.0083 15.7 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452208908|ref|YP_007489022.1| - 0.012 14.8 0.0 0.51 9.5 0.0 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|452208908|ref|YP_007489022.1| - 0.012 14.7 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 UPF0079 PF02367.12 gi|452208908|ref|YP_007489022.1| - 0.015 14.9 0.0 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 Mg_chelatase PF01078.16 gi|452208908|ref|YP_007489022.1| - 0.019 14.1 0.0 0.033 13.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI cobW PF02492.14 gi|452208908|ref|YP_007489022.1| - 0.02 14.3 0.0 0.042 13.2 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.13 gi|452208908|ref|YP_007489022.1| - 0.03 13.7 0.0 0.054 12.9 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Zeta_toxin PF06414.7 gi|452208908|ref|YP_007489022.1| - 0.068 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.1 gi|452208908|ref|YP_007489022.1| - 0.074 12.9 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|452208908|ref|YP_007489022.1| - 0.093 11.6 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.1 gi|452208908|ref|YP_007489022.1| - 0.099 11.6 0.0 3.6 6.5 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_5 PF07728.9 gi|452208908|ref|YP_007489022.1| - 0.1 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.10 gi|452208908|ref|YP_007489022.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 NTPase G-alpha PF00503.15 gi|452208908|ref|YP_007489022.1| - 0.12 11.0 0.0 0.17 10.5 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_17 PF13207.1 gi|452208908|ref|YP_007489022.1| - 0.14 12.9 0.7 0.43 11.4 0.5 1.8 1 1 0 1 1 1 0 AAA domain OpuAC PF04069.7 gi|452208909|ref|YP_007489023.1| - 2.8e-16 59.6 0.0 3e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NTP_transferase PF00483.18 gi|452208911|ref|YP_007489025.1| - 1.7e-29 102.8 0.0 2.3e-29 102.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|452208911|ref|YP_007489025.1| - 9.7e-19 65.9 38.8 6.3e-09 34.9 1.1 5.1 2 1 4 6 6 6 6 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|452208911|ref|YP_007489025.1| - 1.9e-08 34.5 0.0 2.7e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|452208911|ref|YP_007489025.1| - 1.1e-07 31.2 21.5 8.7e-07 28.3 3.5 4.3 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Glycos_transf_2 PF00535.21 gi|452208911|ref|YP_007489025.1| - 0.02 14.6 0.1 0.045 13.4 0.1 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 SIS PF01380.17 gi|452208912|ref|YP_007489026.1| - 6.3e-59 197.2 1.2 3.2e-30 104.3 0.1 2.7 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.1 gi|452208912|ref|YP_007489026.1| - 8e-24 84.1 0.0 2.1e-23 82.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|452208912|ref|YP_007489026.1| - 1.3e-19 70.1 0.0 1.6e-15 56.6 0.0 2.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|452208912|ref|YP_007489026.1| - 1.9e-18 66.3 0.0 7.5e-18 64.4 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.1 gi|452208912|ref|YP_007489026.1| - 1.3e-07 30.6 0.0 2.1e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF2795 PF11387.3 gi|452208912|ref|YP_007489026.1| - 0.072 12.9 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) PGM_PMM_I PF02878.11 gi|452208913|ref|YP_007489027.1| - 6.5e-38 129.3 0.0 1.2e-37 128.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|452208913|ref|YP_007489027.1| - 3.5e-27 94.7 0.0 8.6e-27 93.4 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|452208913|ref|YP_007489027.1| - 6.2e-19 68.1 0.0 1.1e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|452208913|ref|YP_007489027.1| - 6.9e-11 41.9 0.1 1.6e-10 40.7 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_18 PF12847.2 gi|452208913|ref|YP_007489027.1| - 0.045 14.3 0.0 0.15 12.6 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain NTP_transferase PF00483.18 gi|452208914|ref|YP_007489028.1| - 1.1e-43 149.3 0.0 1.4e-43 149.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|452208914|ref|YP_007489028.1| - 1.1e-17 62.6 19.7 1.5e-08 33.7 0.5 4.8 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|452208914|ref|YP_007489028.1| - 2.2e-13 50.5 0.0 2.7e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|452208914|ref|YP_007489028.1| - 7.1e-07 28.6 10.9 2.5e-05 23.7 1.0 4.7 3 1 2 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|452208914|ref|YP_007489028.1| - 0.0001 21.8 0.0 0.00035 20.1 0.0 1.8 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AAA PF00004.24 gi|452208917|ref|YP_007489031.1| - 7.8e-37 126.4 0.0 1.3e-36 125.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|452208917|ref|YP_007489031.1| - 1e-09 38.5 0.0 2.9e-09 37.0 0.0 1.7 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_17 PF13207.1 gi|452208917|ref|YP_007489031.1| - 7.6e-07 29.9 0.2 2.8e-06 28.1 0.1 2.1 2 1 0 2 2 1 1 AAA domain RuvB_N PF05496.7 gi|452208917|ref|YP_007489031.1| - 9.5e-07 28.0 0.0 1.2e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|452208917|ref|YP_007489031.1| - 4.2e-06 26.9 0.4 0.00045 20.3 0.3 2.6 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.8 gi|452208917|ref|YP_007489031.1| - 1.7e-05 23.7 0.0 4.7e-05 22.2 0.0 1.7 2 0 0 2 2 2 1 TIP49 C-terminus AAA_5 PF07728.9 gi|452208917|ref|YP_007489031.1| - 7.8e-05 22.4 0.0 0.00031 20.4 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.12 gi|452208917|ref|YP_007489031.1| - 0.0001 21.7 0.0 0.00019 20.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.1 gi|452208917|ref|YP_007489031.1| - 0.00015 21.7 0.0 0.00033 20.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|452208917|ref|YP_007489031.1| - 0.0003 20.8 0.1 0.01 15.8 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.1 gi|452208917|ref|YP_007489031.1| - 0.00035 20.8 0.0 0.001 19.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|452208917|ref|YP_007489031.1| - 0.0012 18.7 0.0 0.002 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|452208917|ref|YP_007489031.1| - 0.0013 17.8 0.0 0.0026 16.9 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI DUF815 PF05673.8 gi|452208917|ref|YP_007489031.1| - 0.003 16.5 0.0 0.009 14.9 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.1 gi|452208917|ref|YP_007489031.1| - 0.0038 16.6 1.4 0.11 11.9 0.1 2.1 1 1 1 2 2 2 1 AAA domain Bac_DnaA PF00308.13 gi|452208917|ref|YP_007489031.1| - 0.017 14.7 0.0 0.039 13.5 0.0 1.6 1 1 0 1 1 1 0 Bacterial dnaA protein Sigma54_activat PF00158.21 gi|452208917|ref|YP_007489031.1| - 0.024 14.1 0.0 0.06 12.8 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_10 PF12846.2 gi|452208917|ref|YP_007489031.1| - 0.025 14.0 0.8 0.1 12.0 0.0 2.2 3 0 0 3 3 3 0 AAA-like domain RNA_helicase PF00910.17 gi|452208917|ref|YP_007489031.1| - 0.027 14.6 0.0 0.063 13.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.12 gi|452208917|ref|YP_007489031.1| - 0.029 13.2 0.0 0.051 12.4 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 IPT PF01745.11 gi|452208917|ref|YP_007489031.1| - 0.034 13.3 0.0 0.063 12.4 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase AAA_24 PF13479.1 gi|452208917|ref|YP_007489031.1| - 0.039 13.5 0.0 0.064 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.4 gi|452208917|ref|YP_007489031.1| - 0.041 13.3 0.0 0.078 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.7 gi|452208917|ref|YP_007489031.1| - 0.044 13.4 0.1 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain PhoH PF02562.11 gi|452208917|ref|YP_007489031.1| - 0.047 12.9 0.0 0.12 11.6 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein ABC_tran PF00005.22 gi|452208917|ref|YP_007489031.1| - 0.063 13.5 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_14 PF13173.1 gi|452208917|ref|YP_007489031.1| - 0.069 13.0 0.0 0.14 12.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain Torsin PF06309.6 gi|452208917|ref|YP_007489031.1| - 0.071 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Torsin T2SE PF00437.15 gi|452208917|ref|YP_007489031.1| - 0.081 11.8 0.0 0.15 10.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein HARE-HTH PF05066.8 gi|452208917|ref|YP_007489031.1| - 0.086 13.2 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain PEPCK_ATP PF01293.15 gi|452208917|ref|YP_007489031.1| - 0.092 11.2 0.0 0.14 10.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase Sigma54_activ_2 PF14532.1 gi|452208917|ref|YP_007489031.1| - 0.12 12.3 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF258 PF03193.11 gi|452208917|ref|YP_007489031.1| - 0.15 11.2 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Lactamase_B_2 PF12706.2 gi|452208920|ref|YP_007489034.1| - 3.2e-33 114.9 0.0 4e-33 114.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452208920|ref|YP_007489034.1| - 8.4e-14 51.6 0.0 2.4e-11 43.6 0.0 2.2 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|452208920|ref|YP_007489034.1| - 0.0013 18.1 0.0 0.0027 17.1 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease TP_methylase PF00590.15 gi|452208921|ref|YP_007489035.1| - 4.6e-54 183.3 0.1 5.3e-54 183.1 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HEM4 PF02602.10 gi|452208922|ref|YP_007489036.1| - 1.3e-49 168.5 0.0 1.6e-49 168.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Radical_SAM PF04055.16 gi|452208923|ref|YP_007489037.1| - 4.8e-23 82.1 0.0 2e-22 80.1 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452208923|ref|YP_007489037.1| - 1.2e-10 41.5 0.0 2.6e-10 40.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452208923|ref|YP_007489037.1| - 1.8e-09 37.6 0.0 3.3e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Pterin_bind PF00809.17 gi|452208923|ref|YP_007489037.1| - 0.032 13.5 0.0 3 7.1 0.0 2.3 2 0 0 2 2 2 0 Pterin binding enzyme Glyco_hydro_97 PF10566.4 gi|452208923|ref|YP_007489037.1| - 0.033 13.2 0.0 0.053 12.6 0.0 1.3 1 0 0 1 1 1 0 Glycoside hydrolase 97 AP_endonuc_2 PF01261.19 gi|452208923|ref|YP_007489037.1| - 0.099 11.9 0.0 0.22 10.7 0.0 1.6 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel HAD_2 PF13419.1 gi|452208923|ref|YP_007489037.1| - 0.13 12.4 0.0 4.2 7.5 0.0 2.7 2 1 1 3 3 3 0 Haloacid dehalogenase-like hydrolase APH PF01636.18 gi|452208924|ref|YP_007489038.1| - 1.4e-28 100.2 0.0 1.7e-28 99.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.9 gi|452208924|ref|YP_007489038.1| - 7.9e-05 21.7 0.0 0.00011 21.3 0.0 1.1 1 0 0 1 1 1 1 Fructosamine kinase Choline_kinase PF01633.15 gi|452208924|ref|YP_007489038.1| - 0.0014 18.2 0.1 0.0078 15.8 0.0 1.9 2 0 0 2 2 2 1 Choline/ethanolamine kinase APH PF01636.18 gi|452208925|ref|YP_007489039.1| - 7e-07 29.2 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.17 gi|452208925|ref|YP_007489039.1| - 0.011 15.1 0.1 4.1 6.7 0.0 2.3 2 0 0 2 2 2 0 RIO1 family Pkinase_Tyr PF07714.12 gi|452208925|ref|YP_007489039.1| - 0.12 11.3 0.0 0.28 10.2 0.0 1.7 1 1 0 1 1 1 0 Protein tyrosine kinase HAD_2 PF13419.1 gi|452208926|ref|YP_007489040.1| - 9.7e-24 84.5 0.0 1.2e-23 84.2 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452208926|ref|YP_007489040.1| - 0.0026 17.4 0.0 0.0043 16.7 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|452208926|ref|YP_007489040.1| - 0.04 14.3 0.0 0.11 12.9 0.0 1.7 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|452208927|ref|YP_007489041.1| - 1.2e-23 84.2 0.0 1.4e-23 84.0 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452208927|ref|YP_007489041.1| - 1.5e-06 27.8 0.0 2.4e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|452208927|ref|YP_007489041.1| - 0.00029 21.3 0.0 0.00044 20.7 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|452208927|ref|YP_007489041.1| - 0.11 11.5 0.0 0.49 9.5 0.0 1.8 2 0 0 2 2 2 0 Putative Phosphatase tRNA-synt_1 PF00133.17 gi|452208929|ref|YP_007489043.1| - 8e-136 453.4 1.8 4.7e-135 450.9 1.2 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|452208929|ref|YP_007489043.1| - 3e-35 121.2 0.0 6.1e-35 120.2 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|452208929|ref|YP_007489043.1| - 1.7e-24 86.2 0.3 9.7e-14 50.8 0.0 3.5 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|452208929|ref|YP_007489043.1| - 2.9e-06 26.7 0.0 3.4e-05 23.2 0.0 2.4 2 1 1 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|452208929|ref|YP_007489043.1| - 5.1e-06 25.8 0.0 0.014 14.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|452208929|ref|YP_007489043.1| - 0.019 13.6 0.0 0.49 9.0 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) tRNA-synt_1b PF00579.20 gi|452208929|ref|YP_007489043.1| - 0.059 12.4 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) UbiA PF01040.13 gi|452208930|ref|YP_007489044.1| - 0.013 14.7 1.2 0.014 14.5 0.8 1.0 1 0 0 1 1 1 0 UbiA prenyltransferase family MatK_N PF01824.13 gi|452208931|ref|YP_007489045.1| - 0.0077 15.3 2.4 0.011 14.8 1.6 1.2 1 0 0 1 1 1 1 MatK/TrnK amino terminal region DHBP_synthase PF00926.14 gi|452208931|ref|YP_007489045.1| - 0.041 13.0 0.2 0.083 12.0 0.1 1.4 1 0 0 1 1 1 0 3,4-dihydroxy-2-butanone 4-phosphate synthase Sec16_N PF12935.2 gi|452208931|ref|YP_007489045.1| - 0.3 10.9 14.5 0.096 12.5 8.2 1.4 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 N-terminus T2SE PF00437.15 gi|452208932|ref|YP_007489046.1| - 2.7e-44 151.1 0.0 3.8e-44 150.6 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.22 gi|452208932|ref|YP_007489046.1| - 0.015 15.5 0.1 0.064 13.5 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_29 PF13555.1 gi|452208932|ref|YP_007489046.1| - 0.099 12.1 0.1 0.24 10.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain KaiC PF06745.8 gi|452208933|ref|YP_007489047.1| - 1.7e-26 92.7 0.2 1.9e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.6 gi|452208933|ref|YP_007489047.1| - 2.3e-09 36.5 1.6 2.2e-05 23.4 0.1 2.1 1 1 0 2 2 2 2 PAXNEB protein AAA_25 PF13481.1 gi|452208933|ref|YP_007489047.1| - 2e-07 30.6 0.0 3.5e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF835 PF05763.7 gi|452208933|ref|YP_007489047.1| - 2.8e-06 26.9 0.1 5.9e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF835) AAA_22 PF13401.1 gi|452208933|ref|YP_007489047.1| - 0.00053 20.1 0.0 0.001 19.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.6 gi|452208933|ref|YP_007489047.1| - 0.00092 18.1 0.2 0.0036 16.2 0.1 2.0 1 1 0 1 1 1 1 Rad51 AAA_14 PF13173.1 gi|452208933|ref|YP_007489047.1| - 0.011 15.5 0.5 0.19 11.6 0.3 2.3 1 1 0 1 1 1 0 AAA domain Elong_Iki1 PF10483.4 gi|452208933|ref|YP_007489047.1| - 0.025 13.9 0.1 0.03 13.6 0.1 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 RecA PF00154.16 gi|452208933|ref|YP_007489047.1| - 0.042 12.9 0.1 0.12 11.3 0.0 1.6 2 0 0 2 2 2 0 recA bacterial DNA recombination protein UPF0079 PF02367.12 gi|452208933|ref|YP_007489047.1| - 0.052 13.1 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_15 PF13175.1 gi|452208933|ref|YP_007489047.1| - 0.06 12.3 7.0 0.34 9.9 0.4 2.2 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.13 gi|452208933|ref|YP_007489047.1| - 0.073 12.5 0.0 1 8.8 0.0 2.0 1 1 1 2 2 2 0 FtsK/SpoIIIE family DUF4097 PF13349.1 gi|452208934|ref|YP_007489048.1| - 0.0092 15.5 0.2 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4097) Arch_flagellin PF01917.11 gi|452208935|ref|YP_007489049.1| - 4.5e-11 42.7 0.5 1.3e-10 41.1 0.2 1.7 2 0 0 2 2 2 1 Archaebacterial flagellin Ribosomal_60s PF00428.14 gi|452208936|ref|YP_007489050.1| - 0.017 15.5 1.1 0.035 14.4 0.8 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein Med23 PF11573.3 gi|452208936|ref|YP_007489050.1| - 0.038 11.3 0.0 0.043 11.1 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 23 Imm2 PF14426.1 gi|452208936|ref|YP_007489050.1| - 0.36 10.8 2.7 3.2 7.8 0.0 3.1 2 1 1 3 3 3 0 Immunity protein Imm2 Arch_flagellin PF01917.11 gi|452208937|ref|YP_007489051.1| - 2.7e-29 102.1 6.2 7e-29 100.7 4.3 1.6 1 1 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.11 gi|452208938|ref|YP_007489052.1| - 2.1e-11 43.7 1.3 4.5e-11 42.7 0.9 1.5 1 1 0 1 1 1 1 Archaebacterial flagellin CheR PF01739.13 gi|452208939|ref|YP_007489053.1| - 1.4e-59 200.7 0.0 1.7e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.10 gi|452208939|ref|YP_007489053.1| - 5.6e-15 54.4 0.8 9.2e-15 53.7 0.5 1.3 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_25 PF13649.1 gi|452208939|ref|YP_007489053.1| - 0.00011 22.4 0.0 0.00021 21.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452208939|ref|YP_007489053.1| - 0.00016 22.0 0.0 0.00063 20.1 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452208939|ref|YP_007489053.1| - 0.00032 20.4 0.0 0.00039 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452208939|ref|YP_007489053.1| - 0.00062 20.2 0.0 0.0015 19.0 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452208939|ref|YP_007489053.1| - 0.0031 18.0 0.0 0.0056 17.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452208939|ref|YP_007489053.1| - 0.012 15.2 0.1 0.06 12.9 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_2 PF00891.13 gi|452208939|ref|YP_007489053.1| - 0.021 13.9 0.0 0.03 13.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase CheD PF03975.8 gi|452208940|ref|YP_007489054.1| - 3.1e-31 107.5 0.2 4.5e-31 106.9 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.7 gi|452208941|ref|YP_007489055.1| - 9.1e-26 89.3 0.3 1.4e-13 50.3 0.0 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.1 gi|452208941|ref|YP_007489055.1| - 6.5e-12 45.1 0.2 8.3e-07 28.7 0.0 2.3 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX CheW PF01584.14 gi|452208942|ref|YP_007489056.1| - 3.7e-28 97.6 0.8 6e-27 93.7 0.3 2.6 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.21 gi|452208942|ref|YP_007489056.1| - 1.2e-21 76.4 0.1 3.4e-21 75.0 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P2 PF07194.6 gi|452208942|ref|YP_007489056.1| - 1.3e-19 69.8 0.4 1.3e-19 69.8 0.3 2.7 3 0 0 3 3 3 1 P2 response regulator binding domain Hpt PF01627.18 gi|452208942|ref|YP_007489056.1| - 1.5e-17 63.3 0.0 4.6e-17 61.8 0.0 1.9 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.9 gi|452208942|ref|YP_007489056.1| - 3.5e-17 62.4 3.5 7.5e-17 61.4 0.8 2.7 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.1 gi|452208942|ref|YP_007489056.1| - 2.7e-06 27.0 0.1 1e-05 25.1 0.1 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|452208942|ref|YP_007489056.1| - 0.00051 19.7 0.6 0.0047 16.6 0.4 2.6 1 1 0 1 1 1 1 GHKL domain CheB_methylest PF01339.12 gi|452208943|ref|YP_007489057.1| - 8.7e-60 201.2 0.2 1.3e-59 200.7 0.1 1.2 1 0 0 1 1 1 1 CheB methylesterase Response_reg PF00072.19 gi|452208943|ref|YP_007489057.1| - 1e-23 83.4 0.6 2.2e-23 82.3 0.4 1.6 1 0 0 1 1 1 1 Response regulator receiver domain MTD PF01993.13 gi|452208943|ref|YP_007489057.1| - 0.028 13.4 1.1 0.96 8.4 0.2 2.2 1 1 1 2 2 2 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase DUF1542 PF07564.6 gi|452208943|ref|YP_007489057.1| - 0.035 14.1 0.0 0.38 10.7 0.0 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) Response_reg PF00072.19 gi|452208944|ref|YP_007489058.1| - 4.1e-30 104.0 0.9 4.6e-30 103.9 0.6 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CheF-arch PF04283.7 gi|452208945|ref|YP_007489059.1| - 9.4e-51 172.1 0.9 1.3e-50 171.7 0.6 1.1 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea HTH_45 PF14947.1 gi|452208945|ref|YP_007489059.1| - 0.00037 20.2 0.1 0.0089 15.8 0.0 2.8 2 2 1 3 3 3 1 Winged helix-turn-helix CheW PF01584.14 gi|452208946|ref|YP_007489060.1| - 5.7e-37 126.2 0.2 6.4e-37 126.1 0.2 1.0 1 0 0 1 1 1 1 CheW-like domain MCPsignal PF00015.16 gi|452208947|ref|YP_007489061.1| - 5.1e-47 160.1 46.8 1.7e-46 158.4 20.2 3.1 2 1 2 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|452208947|ref|YP_007489061.1| - 7.4e-16 58.4 0.1 8.3e-07 29.3 0.0 3.1 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|452208947|ref|YP_007489061.1| - 2.4e-13 49.9 0.0 4.1e-12 46.0 0.0 2.6 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.5 gi|452208947|ref|YP_007489061.1| - 1.7e-10 40.9 0.0 0.00028 20.9 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|452208947|ref|YP_007489061.1| - 5.5e-09 35.8 0.1 1.2e-05 25.0 0.0 3.2 4 0 0 4 4 3 2 PAS fold HAMP PF00672.20 gi|452208947|ref|YP_007489061.1| - 0.0018 18.4 1.7 0.84 9.8 0.0 4.4 3 1 0 3 3 3 1 HAMP domain PAS_11 PF14598.1 gi|452208947|ref|YP_007489061.1| - 0.05 13.5 0.0 0.45 10.5 0.0 2.5 3 0 0 3 3 3 0 PAS domain DUF489 PF04356.7 gi|452208947|ref|YP_007489061.1| - 0.12 11.9 11.3 0.092 12.3 3.9 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF489) Herpes_U30 PF04523.8 gi|452208947|ref|YP_007489061.1| - 0.24 8.8 9.2 0.16 9.3 2.0 2.2 1 1 0 2 2 2 0 Herpes virus tegument protein U30 CK2S PF15011.1 gi|452208947|ref|YP_007489061.1| - 0.45 10.2 11.7 0.44 10.3 0.2 3.8 4 1 1 5 5 5 0 Casein Kinase 2 substrate DUF552 PF04472.7 gi|452208947|ref|YP_007489061.1| - 1.4 8.9 7.6 0.79 9.6 0.0 3.8 5 0 0 5 5 5 0 Protein of unknown function (DUF552) Laminin_II PF06009.7 gi|452208947|ref|YP_007489061.1| - 1.7 8.4 36.1 0.45 10.2 4.0 5.4 2 2 2 4 4 4 0 Laminin Domain II Ufd2P_core PF10408.4 gi|452208947|ref|YP_007489061.1| - 3.8 5.6 12.0 0.15 10.3 2.3 2.3 2 1 0 2 2 2 0 Ubiquitin elongating factor core DUF948 PF06103.6 gi|452208947|ref|YP_007489061.1| - 5.7 6.8 29.5 2.9 7.8 2.2 5.5 3 2 4 7 7 7 0 Bacterial protein of unknown function (DUF948) FUSC PF04632.7 gi|452208947|ref|YP_007489061.1| - 6.7 5.0 11.9 2.4 6.4 2.1 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family AATF-Che1 PF13339.1 gi|452208947|ref|YP_007489061.1| - 7.5 6.7 17.9 1.1 9.4 4.2 3.4 3 1 0 3 3 3 0 Apoptosis antagonizing transcription factor DrsE PF02635.10 gi|452208948|ref|YP_007489062.1| - 8.5e-11 41.9 0.0 9.8e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.1 gi|452208948|ref|YP_007489062.1| - 2.3e-09 37.1 0.1 2.4e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family HMG-CoA_red PF00368.13 gi|452208949|ref|YP_007489063.1| - 5.4e-149 495.9 2.3 6.1e-149 495.7 1.6 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Phos_pyr_kin PF08543.7 gi|452208951|ref|YP_007489065.1| - 5.4e-83 277.9 5.2 8.3e-83 277.3 3.6 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Aldolase_2 PF10120.4 gi|452208951|ref|YP_007489065.1| - 1.8e-64 216.2 0.2 2.7e-64 215.6 0.1 1.3 1 0 0 1 1 1 1 Putative aldolase PfkB PF00294.19 gi|452208951|ref|YP_007489065.1| - 7.1e-10 38.4 1.7 1.1e-09 37.8 1.2 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.10 gi|452208951|ref|YP_007489065.1| - 7.5e-05 22.0 1.4 0.00017 20.8 1.0 1.5 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family LSM PF01423.17 gi|452208952|ref|YP_007489066.1| - 1.3e-20 72.6 0.1 1.5e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 LSM domain Ribosomal_L37e PF01907.14 gi|452208953|ref|YP_007489067.1| - 8.4e-22 76.7 15.6 9e-22 76.6 10.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e zinc_ribbon_2 PF13240.1 gi|452208953|ref|YP_007489067.1| - 0.0089 15.4 2.8 0.017 14.5 1.9 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|452208953|ref|YP_007489067.1| - 0.012 15.4 1.6 0.017 14.9 1.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS91 PF14319.1 gi|452208953|ref|YP_007489067.1| - 0.018 14.5 4.4 0.017 14.6 3.1 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-ribbon_3 PF13248.1 gi|452208953|ref|YP_007489067.1| - 0.034 13.3 2.6 0.077 12.2 1.8 1.7 1 1 0 1 1 1 0 zinc-ribbon domain HypA PF01155.14 gi|452208953|ref|YP_007489067.1| - 0.22 11.2 2.4 0.24 11.1 1.7 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Zn-ribbon_8 PF09723.5 gi|452208953|ref|YP_007489067.1| - 1.1 9.2 6.0 3.7 7.5 0.2 2.2 1 1 2 3 3 3 0 Zinc ribbon domain YhfH PF14149.1 gi|452208953|ref|YP_007489067.1| - 1.3 8.8 6.2 1.5 8.6 0.5 2.3 1 1 1 2 2 2 0 YhfH-like protein OrfB_Zn_ribbon PF07282.6 gi|452208953|ref|YP_007489067.1| - 4.6 6.9 7.1 4.1 7.1 4.1 1.6 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|452208953|ref|YP_007489067.1| - 6.2 6.3 7.0 15 5.1 0.7 2.3 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit GATase_2 PF00310.16 gi|452208954|ref|YP_007489068.1| - 2.1e-22 79.3 0.0 1.4e-15 56.9 0.0 3.0 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|452208954|ref|YP_007489068.1| - 3.1e-21 75.3 0.0 5.2e-21 74.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|452208954|ref|YP_007489068.1| - 1.9e-20 73.1 0.0 5.3e-20 71.7 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain Pribosyltran PF00156.22 gi|452208954|ref|YP_007489068.1| - 6.6e-13 48.4 0.7 1.4e-12 47.3 0.5 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|452208954|ref|YP_007489068.1| - 8.4e-09 34.4 0.0 1.5e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II UPF0047 PF01894.12 gi|452208955|ref|YP_007489069.1| - 1.1e-39 134.9 0.0 1.3e-39 134.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2113 PF09886.4 gi|452208955|ref|YP_007489069.1| - 0.1 11.7 0.0 0.23 10.6 0.0 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2113) TrmB PF01978.14 gi|452208957|ref|YP_007489071.1| - 7.8e-25 86.3 0.1 2e-24 85.0 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.11 gi|452208957|ref|YP_007489071.1| - 0.00013 22.0 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.1 gi|452208957|ref|YP_007489071.1| - 0.00014 21.1 0.0 0.00025 20.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|452208957|ref|YP_007489071.1| - 0.004 17.2 0.0 0.006 16.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.6 gi|452208957|ref|YP_007489071.1| - 0.0052 16.6 0.0 0.008 16.0 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR_2 PF12802.2 gi|452208957|ref|YP_007489071.1| - 0.0058 16.2 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|452208957|ref|YP_007489071.1| - 0.0065 16.2 0.2 0.04 13.7 0.0 2.2 2 1 1 3 3 3 1 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|452208957|ref|YP_007489071.1| - 0.039 13.9 0.0 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain Sulfolobus_pRN PF05584.6 gi|452208957|ref|YP_007489071.1| - 0.046 13.7 0.2 0.18 11.8 0.0 1.9 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein HTH_IclR PF09339.5 gi|452208957|ref|YP_007489071.1| - 0.05 13.2 0.1 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain YflT PF11181.3 gi|452208957|ref|YP_007489071.1| - 0.056 13.6 0.1 0.17 12.0 0.0 1.8 2 0 0 2 2 2 0 Heat induced stress protein YflT DUF2666 PF10869.3 gi|452208957|ref|YP_007489071.1| - 0.1 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) MarR PF01047.17 gi|452208958|ref|YP_007489072.1| - 1.7e-10 40.4 0.0 3.3e-10 39.5 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|452208958|ref|YP_007489072.1| - 1.4e-07 31.7 0.2 5e-07 29.9 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452208958|ref|YP_007489072.1| - 4e-05 23.1 0.0 6.3e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|452208958|ref|YP_007489072.1| - 0.00021 21.2 0.0 0.00049 20.0 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain RPAP1_N PF08621.5 gi|452208958|ref|YP_007489072.1| - 0.0024 17.4 1.0 0.0061 16.1 0.7 1.7 1 0 0 1 1 1 1 RPAP1-like, N-terminal HTH_45 PF14947.1 gi|452208958|ref|YP_007489072.1| - 0.0087 15.8 0.0 0.021 14.6 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix HxlR PF01638.12 gi|452208958|ref|YP_007489072.1| - 0.021 14.4 0.1 0.042 13.4 0.0 1.6 2 0 0 2 2 2 0 HxlR-like helix-turn-helix PadR PF03551.9 gi|452208958|ref|YP_007489072.1| - 0.047 13.4 0.1 0.14 11.9 0.0 1.8 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family RepL PF05732.6 gi|452208958|ref|YP_007489072.1| - 0.085 12.0 0.1 0.35 10.0 0.1 1.9 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) CDC48_2 PF02933.12 gi|452208959|ref|YP_007489073.1| - 0.053 13.1 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 MatE PF01554.13 gi|452208960|ref|YP_007489074.1| - 3.1e-47 160.2 33.3 3.2e-26 91.8 6.7 3.0 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.1 gi|452208960|ref|YP_007489074.1| - 8.8e-12 45.0 23.5 1.3e-10 41.2 6.2 4.8 2 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TraS PF10624.4 gi|452208960|ref|YP_007489074.1| - 0.055 13.0 2.1 0.15 11.5 1.5 1.8 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS DX PF01666.12 gi|452208961|ref|YP_007489075.1| - 0.095 13.1 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 DX module Rhodanese PF00581.15 gi|452208962|ref|YP_007489076.1| - 3.8e-43 146.4 0.0 4.6e-21 75.2 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF442 PF04273.8 gi|452208962|ref|YP_007489076.1| - 1.1e-05 25.2 0.0 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Putative phosphatase (DUF442) ThiC-associated PF13667.1 gi|452208962|ref|YP_007489076.1| - 0.036 13.6 0.0 3.6 7.1 0.0 2.2 2 0 0 2 2 2 0 ThiC-associated domain DSPc PF00782.15 gi|452208962|ref|YP_007489076.1| - 0.056 13.0 0.0 3.6 7.1 0.0 2.3 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain ELFV_dehydrog PF00208.16 gi|452208965|ref|YP_007489079.1| - 1.2e-59 201.9 0.0 1.4e-59 201.6 0.0 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|452208965|ref|YP_007489079.1| - 1.2e-30 105.8 0.0 1.7e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.14 gi|452208965|ref|YP_007489079.1| - 0.012 14.7 0.1 0.024 13.7 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Gp_dh_N PF00044.19 gi|452208965|ref|YP_007489079.1| - 0.016 15.1 0.6 0.37 10.7 0.1 2.5 2 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Bac_GDH PF05088.7 gi|452208965|ref|YP_007489079.1| - 0.02 12.3 0.0 0.027 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase AdoHcyase_NAD PF00670.16 gi|452208965|ref|YP_007489079.1| - 0.045 13.6 0.1 0.086 12.6 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_7 PF13241.1 gi|452208965|ref|YP_007489079.1| - 0.062 13.5 0.0 0.15 12.3 0.0 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding ThiF PF00899.16 gi|452208965|ref|YP_007489079.1| - 0.13 12.1 1.0 0.25 11.1 0.7 1.5 1 0 0 1 1 1 0 ThiF family Succ_CoA_lig PF13607.1 gi|452208966|ref|YP_007489080.1| - 2.1e-49 166.7 0.7 1.9e-48 163.5 0.5 2.3 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|452208966|ref|YP_007489080.1| - 1.8e-24 86.1 0.0 2.1e-22 79.4 0.0 3.2 3 1 0 3 3 3 1 CoA binding domain CoA_binding PF02629.14 gi|452208966|ref|YP_007489080.1| - 2e-13 50.6 0.0 2.9e-11 43.7 0.0 3.4 4 0 0 4 4 4 1 CoA binding domain HEM4 PF02602.10 gi|452208966|ref|YP_007489080.1| - 0.0055 15.9 0.2 0.15 11.2 0.0 2.8 2 1 1 3 3 3 1 Uroporphyrinogen-III synthase HemD Peripla_BP_3 PF13377.1 gi|452208966|ref|YP_007489080.1| - 0.0068 16.4 0.0 0.19 11.6 0.0 2.5 2 0 0 2 2 2 1 Periplasmic binding protein-like domain F420_oxidored PF03807.12 gi|452208966|ref|YP_007489080.1| - 0.062 13.7 0.3 2.9 8.3 0.0 3.6 4 1 0 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent SAP PF02037.22 gi|452208966|ref|YP_007489080.1| - 0.065 12.7 0.3 2.9 7.5 0.0 3.0 3 0 0 3 3 3 0 SAP domain DEDD_Tnp_IS110 PF01548.12 gi|452208966|ref|YP_007489080.1| - 0.096 12.3 0.0 13 5.4 0.0 2.4 2 0 0 2 2 2 0 Transposase HxlR PF01638.12 gi|452208967|ref|YP_007489081.1| - 3.6e-20 71.3 0.3 4.3e-20 71.1 0.2 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix YjcQ PF09639.5 gi|452208967|ref|YP_007489081.1| - 0.0007 19.6 0.0 0.0014 18.6 0.0 1.5 1 1 0 1 1 1 1 YjcQ protein PadR PF03551.9 gi|452208967|ref|YP_007489081.1| - 0.0057 16.3 0.0 0.0085 15.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|452208967|ref|YP_007489081.1| - 0.0061 16.6 0.0 0.008 16.2 0.0 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.1 gi|452208967|ref|YP_007489081.1| - 0.074 12.8 0.1 0.15 11.8 0.1 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix DUF4393 PF14337.1 gi|452208967|ref|YP_007489081.1| - 0.1 12.0 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) DUF3936 PF13072.1 gi|452208967|ref|YP_007489081.1| - 0.12 11.8 1.3 0.4 10.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3936) HTH_27 PF13463.1 gi|452208967|ref|YP_007489081.1| - 0.12 12.6 0.1 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain NIR_SIR PF01077.17 gi|452208968|ref|YP_007489082.1| - 1.5e-36 125.1 0.0 1.5e-35 121.9 0.0 1.9 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|452208968|ref|YP_007489082.1| - 1.4e-16 59.8 0.0 3.2e-16 58.7 0.0 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain HxlR PF01638.12 gi|452208969|ref|YP_007489083.1| - 4.4e-24 83.9 0.5 5.4e-24 83.6 0.3 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.1 gi|452208969|ref|YP_007489083.1| - 4.9e-05 23.2 0.1 6.5e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.9 gi|452208969|ref|YP_007489083.1| - 0.00015 21.4 0.0 0.00033 20.3 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|452208969|ref|YP_007489083.1| - 0.00026 21.0 0.1 0.00036 20.5 0.1 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.1 gi|452208969|ref|YP_007489083.1| - 0.0028 17.4 0.1 0.0046 16.7 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.1 gi|452208969|ref|YP_007489083.1| - 0.029 13.7 0.4 0.049 13.0 0.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF4423 PF14394.1 gi|452208969|ref|YP_007489083.1| - 0.034 13.7 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF438 PF04282.8 gi|452208969|ref|YP_007489083.1| - 0.072 12.8 0.5 0.13 12.0 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF438) HTH_27 PF13463.1 gi|452208969|ref|YP_007489083.1| - 0.1 12.9 0.1 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|452208969|ref|YP_007489083.1| - 0.11 12.6 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator NIR_SIR PF01077.17 gi|452208970|ref|YP_007489084.1| - 9.3e-38 129.0 0.0 1.6e-37 128.2 0.0 1.4 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|452208970|ref|YP_007489084.1| - 1.8e-13 49.8 0.0 3.7e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain TPR_21 PF09976.4 gi|452208970|ref|YP_007489084.1| - 0.11 12.4 0.6 2.6 7.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Cupin_2 PF07883.6 gi|452208971|ref|YP_007489085.1| - 2.4e-14 52.5 0.1 3.2e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 gi|452208971|ref|YP_007489085.1| - 0.00084 18.7 0.0 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.14 gi|452208971|ref|YP_007489085.1| - 0.014 15.0 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|452208971|ref|YP_007489085.1| - 0.025 14.1 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase DUF4585 PF15232.1 gi|452208971|ref|YP_007489085.1| - 0.055 13.3 0.0 0.27 11.1 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4585) cNMP_binding PF00027.24 gi|452208971|ref|YP_007489085.1| - 0.077 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Pirin_C PF05726.8 gi|452208971|ref|YP_007489085.1| - 0.078 13.0 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain CGGC PF08821.6 gi|452208972|ref|YP_007489086.1| - 1.1e-36 125.1 1.5 1.2e-36 124.9 1.0 1.0 1 0 0 1 1 1 1 CGGC domain B12-binding PF02310.14 gi|452208972|ref|YP_007489086.1| - 0.11 12.3 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain zf-C2H2 PF00096.21 gi|452208972|ref|YP_007489086.1| - 0.12 12.7 3.1 3.4 8.1 0.1 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type Fer4_7 PF12838.2 gi|452208974|ref|YP_007489088.1| - 2.8e-08 34.0 11.0 0.00021 21.5 0.6 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452208974|ref|YP_007489088.1| - 2.8e-08 33.4 7.5 2.8e-08 33.4 5.2 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452208974|ref|YP_007489088.1| - 8.3e-08 31.7 8.7 6e-07 29.0 2.6 3.9 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452208974|ref|YP_007489088.1| - 2.7e-07 30.7 19.0 3.4e-06 27.2 5.2 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452208974|ref|YP_007489088.1| - 3.2e-07 29.6 11.9 1.3e-05 24.6 3.5 3.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452208974|ref|YP_007489088.1| - 1.1e-06 28.3 8.4 1.1e-06 28.3 5.8 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208974|ref|YP_007489088.1| - 1.2e-06 29.1 12.3 0.0005 20.7 1.7 2.5 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|452208974|ref|YP_007489088.1| - 0.0004 20.8 13.3 0.02 15.4 2.2 2.9 2 1 1 3 3 2 2 4Fe-4S single cluster domain Fer4_2 PF12797.2 gi|452208974|ref|YP_007489088.1| - 0.00057 19.6 3.8 0.00057 19.6 2.6 3.8 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452208974|ref|YP_007489088.1| - 0.005 17.1 10.5 0.24 11.7 0.5 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452208974|ref|YP_007489088.1| - 0.045 14.0 3.6 0.045 14.0 2.5 3.9 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452208974|ref|YP_007489088.1| - 0.12 12.3 16.5 1.4 8.9 2.9 3.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF678 PF05077.7 gi|452208974|ref|YP_007489088.1| - 0.28 11.2 2.2 17 5.5 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF678) Fer4_19 PF06902.6 gi|452208974|ref|YP_007489088.1| - 0.81 9.5 6.8 24 4.8 4.7 3.3 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_11 PF13247.1 gi|452208974|ref|YP_007489088.1| - 2 8.3 8.3 1.2 9.0 3.6 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain CMD PF02627.15 gi|452208975|ref|YP_007489089.1| - 3.3e-07 30.0 0.1 3.5e-07 29.9 0.0 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.10 gi|452208975|ref|YP_007489089.1| - 0.11 12.3 0.1 0.3 10.9 0.0 1.7 2 0 0 2 2 2 0 Saposin-like type B, region 1 PDT PF00800.13 gi|452208976|ref|YP_007489090.1| - 1.8e-55 187.2 0.0 2.5e-55 186.8 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|452208976|ref|YP_007489090.1| - 5.1e-11 41.8 0.0 1.5e-10 40.3 0.0 1.8 2 0 0 2 2 2 1 ACT domain SSURE PF11966.3 gi|452208976|ref|YP_007489090.1| - 0.094 12.3 0.0 0.24 10.9 0.0 1.7 1 0 0 1 1 1 0 Fibronectin-binding repeat N_methyl_2 PF13544.1 gi|452208977|ref|YP_007489091.1| - 5.5 6.6 6.5 16 5.2 4.5 1.8 1 0 0 1 1 1 0 Type IV pilin N-term methylation site GFxxxE AAA_3 PF07726.6 gi|452208978|ref|YP_007489092.1| - 3.3e-63 211.1 0.1 5.4e-63 210.4 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|452208978|ref|YP_007489092.1| - 4.1e-13 49.2 0.0 7.1e-13 48.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|452208978|ref|YP_007489092.1| - 3.1e-09 36.0 0.0 5.5e-09 35.2 0.0 1.4 1 1 0 1 1 1 1 MCM2/3/5 family AAA PF00004.24 gi|452208978|ref|YP_007489092.1| - 1.5e-06 28.4 0.0 2.7e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|452208978|ref|YP_007489092.1| - 0.00041 19.4 0.2 0.0036 16.3 0.1 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Sigma54_activat PF00158.21 gi|452208978|ref|YP_007489092.1| - 0.00062 19.2 0.0 0.0019 17.6 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.9 gi|452208978|ref|YP_007489092.1| - 0.032 14.1 0.0 0.06 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF3425 PF11905.3 gi|452208978|ref|YP_007489092.1| - 0.11 12.3 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) DUF58 PF01882.13 gi|452208980|ref|YP_007489094.1| - 1.7e-23 82.5 0.1 9.3e-23 80.1 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_2 PF13519.1 gi|452208980|ref|YP_007489094.1| - 6.3e-09 36.1 0.0 9.5e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|452208980|ref|YP_007489094.1| - 8.3e-07 28.3 0.0 1.5e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.23 gi|452208980|ref|YP_007489094.1| - 0.0024 17.6 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain PaaX PF07848.7 gi|452208980|ref|YP_007489094.1| - 0.026 14.5 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein BatA PF07584.6 gi|452208981|ref|YP_007489095.1| - 2.3e-13 50.1 5.9 2.3e-13 50.1 4.1 1.7 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal DUF2194 PF09960.4 gi|452208981|ref|YP_007489095.1| - 1e-07 30.4 0.0 1.8e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2194) VWA_2 PF13519.1 gi|452208981|ref|YP_007489095.1| - 1e-06 29.0 0.6 3.6e-06 27.1 0.2 2.0 1 1 0 2 2 2 1 von Willebrand factor type A domain Glyco_hydro_42M PF08532.5 gi|452208981|ref|YP_007489095.1| - 0.0012 18.0 0.0 0.0022 17.1 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain ABC_transp_aux PF09822.4 gi|452208981|ref|YP_007489095.1| - 0.029 13.8 0.0 0.061 12.7 0.0 1.6 1 1 0 1 1 1 0 ABC-type uncharacterized transport system DUF1355 PF07090.6 gi|452208981|ref|YP_007489095.1| - 0.078 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1355) ThuA PF06283.6 gi|452208981|ref|YP_007489095.1| - 0.11 12.2 0.0 3.2 7.4 0.0 2.2 2 0 0 2 2 2 0 Trehalose utilisation VWA_2 PF13519.1 gi|452208982|ref|YP_007489096.1| - 1.2e-21 77.5 3.1 1e-15 58.2 0.0 3.4 2 1 1 3 3 3 2 von Willebrand factor type A domain DUF1355 PF07090.6 gi|452208982|ref|YP_007489096.1| - 6.1e-10 38.7 0.0 1.9e-09 37.1 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1355) VWA PF00092.23 gi|452208982|ref|YP_007489096.1| - 1.3e-06 28.2 2.2 0.0012 18.6 0.2 2.8 2 0 0 2 2 2 2 von Willebrand factor type A domain DUF4350 PF14258.1 gi|452208982|ref|YP_007489096.1| - 0.00031 20.8 0.5 0.093 12.9 0.0 3.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4350) DUF4159 PF13709.1 gi|452208982|ref|YP_007489096.1| - 0.0097 15.0 0.0 0.08 12.0 0.0 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4159) Usp PF00582.21 gi|452208982|ref|YP_007489096.1| - 0.05 13.7 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Universal stress protein family ThuA PF06283.6 gi|452208982|ref|YP_007489096.1| - 0.086 12.5 0.0 0.27 10.9 0.0 1.8 2 0 0 2 2 2 0 Trehalose utilisation CTP_transf_1 PF01148.15 gi|452208983|ref|YP_007489097.1| - 3.6e-14 53.0 12.7 1.1e-10 41.6 1.7 2.4 1 1 1 2 2 2 2 Cytidylyltransferase family SNARE_assoc PF09335.6 gi|452208983|ref|YP_007489097.1| - 0.056 13.6 0.7 0.056 13.6 0.5 1.9 2 0 0 2 2 2 0 SNARE associated Golgi protein DUF2061 PF09834.4 gi|452208983|ref|YP_007489097.1| - 9.3 6.5 10.5 0.17 12.1 0.8 2.7 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) UPF0104 PF03706.8 gi|452208984|ref|YP_007489098.1| - 6.2e-43 147.1 22.2 8.1e-43 146.7 15.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) NTP_transferase PF00483.18 gi|452208985|ref|YP_007489099.1| - 3.7e-48 163.9 0.0 5e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|452208985|ref|YP_007489099.1| - 4.5e-20 70.2 26.4 3.2e-08 32.7 1.2 5.1 1 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|452208985|ref|YP_007489099.1| - 2e-09 37.7 0.0 3.1e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|452208985|ref|YP_007489099.1| - 2.4e-09 36.5 25.9 0.00017 21.0 5.8 4.4 1 1 5 6 6 6 6 Hexapeptide repeat of succinyl-transferase Glycos_transf_2 PF00535.21 gi|452208985|ref|YP_007489099.1| - 0.02 14.5 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Fucokinase PF07959.7 gi|452208985|ref|YP_007489099.1| - 0.16 10.5 3.8 0.36 9.3 0.2 2.2 1 1 1 2 2 2 0 L-fucokinase tRNA_anti-codon PF01336.20 gi|452208986|ref|YP_007489100.1| - 1.4e-08 34.4 0.0 1.9e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-like PF12869.2 gi|452208986|ref|YP_007489100.1| - 0.13 11.7 0.2 2.6 7.5 0.0 2.0 1 1 0 1 1 1 0 tRNA_anti-like FKBP_C PF00254.23 gi|452208987|ref|YP_007489101.1| - 8.2e-27 93.0 0.2 1.2e-26 92.5 0.1 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.23 gi|452208988|ref|YP_007489102.1| - 7.7e-30 102.7 0.5 1.2e-29 102.1 0.3 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.23 gi|452208989|ref|YP_007489103.1| - 2.1e-29 101.3 0.9 2.8e-29 100.9 0.6 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1315 PF07023.7 gi|452208989|ref|YP_007489103.1| - 0.078 12.8 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) NosD PF05048.8 gi|452208991|ref|YP_007489105.1| - 1.3e-52 178.3 27.1 1.3e-52 178.3 18.8 2.9 2 1 1 3 3 3 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452208991|ref|YP_007489105.1| - 4.7e-29 101.1 92.1 1.4e-15 57.3 21.6 3.4 2 1 2 4 4 4 3 Right handed beta helix region PKD PF00801.15 gi|452208991|ref|YP_007489105.1| - 2.9e-14 52.5 20.6 5.2e-08 32.5 2.3 3.0 3 0 0 3 3 3 2 PKD domain Peptidase_S68 PF10461.4 gi|452208991|ref|YP_007489105.1| - 0.015 14.9 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 Peptidase S68 Period_C PF12114.3 gi|452208991|ref|YP_007489105.1| - 7.4 6.1 11.5 16 5.0 8.0 1.5 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF387 PF04079.11 gi|452208992|ref|YP_007489106.1| - 0.0015 17.9 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) PadR PF03551.9 gi|452208992|ref|YP_007489106.1| - 0.086 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|452208992|ref|YP_007489106.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|452208992|ref|YP_007489106.1| - 0.15 11.8 0.7 0.55 10.0 0.0 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PadR PF03551.9 gi|452208994|ref|YP_007489108.1| - 0.025 14.3 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Fer4 PF00037.22 gi|452208995|ref|YP_007489109.1| - 1.4e-12 46.6 34.8 0.00024 20.5 2.7 5.7 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452208995|ref|YP_007489109.1| - 1.4e-12 46.8 28.0 0.00011 21.8 0.7 5.1 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452208995|ref|YP_007489109.1| - 2.5e-11 43.7 32.0 1.7e-05 25.0 8.2 4.8 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452208995|ref|YP_007489109.1| - 6.1e-10 39.7 15.5 0.0016 19.1 0.1 4.9 4 0 0 4 4 4 3 4Fe-4S double cluster binding domain DAO PF01266.19 gi|452208995|ref|YP_007489109.1| - 1.2e-09 37.5 0.0 5e-06 25.6 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_2 PF12797.2 gi|452208995|ref|YP_007489109.1| - 4.3e-09 35.7 30.3 0.0038 17.0 2.5 5.0 4 0 0 4 4 4 3 4Fe-4S binding domain Pyr_redox_2 PF07992.9 gi|452208995|ref|YP_007489109.1| - 4.3e-09 36.5 5.3 8.7e-07 29.0 0.4 3.6 3 2 1 4 4 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_10 PF13237.1 gi|452208995|ref|YP_007489109.1| - 1.4e-08 34.3 24.6 2.8e-06 27.0 6.8 3.5 4 0 0 4 4 2 2 4Fe-4S dicluster domain FlpD PF02662.11 gi|452208995|ref|YP_007489109.1| - 3e-08 33.3 0.1 1.5e-06 27.8 0.0 3.5 3 0 0 3 3 3 1 Methyl-viologen-reducing hydrogenase, delta subunit FAD_oxidored PF12831.2 gi|452208995|ref|YP_007489109.1| - 4.1e-08 32.7 0.1 6.1e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer4_9 PF13187.1 gi|452208995|ref|YP_007489109.1| - 8.3e-08 32.3 35.9 4.3e-05 23.7 6.6 4.2 3 2 1 4 4 4 3 4Fe-4S dicluster domain Pyr_redox_3 PF13738.1 gi|452208995|ref|YP_007489109.1| - 1e-07 32.2 0.2 0.00038 20.5 0.0 3.2 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|452208995|ref|YP_007489109.1| - 2.7e-07 29.7 0.2 4.9e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.1 gi|452208995|ref|YP_007489109.1| - 2.4e-06 27.4 0.1 5.4e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|452208995|ref|YP_007489109.1| - 1.1e-05 24.5 0.1 2e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|452208995|ref|YP_007489109.1| - 3e-05 23.2 0.1 5.7e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Fer4_21 PF14697.1 gi|452208995|ref|YP_007489109.1| - 7.3e-05 22.5 37.2 0.0067 16.2 4.9 4.6 4 1 0 4 4 3 3 4Fe-4S dicluster domain FAD_binding_3 PF01494.14 gi|452208995|ref|YP_007489109.1| - 0.00015 20.9 0.4 0.00023 20.3 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain Fer4_8 PF13183.1 gi|452208995|ref|YP_007489109.1| - 0.00099 19.0 22.4 0.0026 17.7 7.0 4.7 4 2 2 6 6 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452208995|ref|YP_007489109.1| - 0.0011 19.4 23.1 0.0082 16.5 0.7 4.7 4 0 0 4 4 4 2 4Fe-4S dicluster domain HI0933_like PF03486.9 gi|452208995|ref|YP_007489109.1| - 0.0015 17.1 0.9 0.0026 16.2 0.6 1.4 1 0 0 1 1 1 1 HI0933-like protein Fer4_17 PF13534.1 gi|452208995|ref|YP_007489109.1| - 0.003 17.8 32.3 0.083 13.2 2.5 5.4 5 2 0 5 5 4 3 4Fe-4S dicluster domain Pyr_redox PF00070.22 gi|452208995|ref|YP_007489109.1| - 0.0045 17.3 0.3 0.15 12.4 0.1 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase B12-binding PF02310.14 gi|452208995|ref|YP_007489109.1| - 0.011 15.5 0.0 1.3 8.9 0.0 2.6 2 0 0 2 2 2 0 B12 binding domain Fer4_15 PF13459.1 gi|452208995|ref|YP_007489109.1| - 0.022 15.2 17.5 0.58 10.7 0.2 4.8 4 0 0 4 4 4 0 4Fe-4S single cluster domain Amino_oxidase PF01593.19 gi|452208995|ref|YP_007489109.1| - 0.039 13.0 0.0 0.075 12.0 0.0 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Fer4_4 PF12800.2 gi|452208995|ref|YP_007489109.1| - 0.16 12.3 44.8 0.03 14.6 3.6 5.8 5 0 0 5 5 5 0 4Fe-4S binding domain Trp_halogenase PF04820.9 gi|452208995|ref|YP_007489109.1| - 0.43 9.1 0.5 1.3 7.6 0.3 1.7 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_8 PF13183.1 gi|452208996|ref|YP_007489110.1| - 2.1e-11 43.6 7.7 3.9e-11 42.8 5.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452208996|ref|YP_007489110.1| - 5.2e-09 36.3 8.7 1.2e-08 35.1 6.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452208996|ref|YP_007489110.1| - 2.9e-07 30.6 8.2 6.6e-07 29.4 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452208996|ref|YP_007489110.1| - 3.2e-06 27.4 8.3 6.3e-06 26.4 5.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452208996|ref|YP_007489110.1| - 8.6e-06 26.0 6.5 0.00081 19.7 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452208996|ref|YP_007489110.1| - 1.3e-05 24.9 8.8 3.5e-05 23.4 6.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452208996|ref|YP_007489110.1| - 0.00025 20.7 11.7 0.00076 19.2 2.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452208996|ref|YP_007489110.1| - 0.00032 20.7 2.2 0.00032 20.7 1.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452208996|ref|YP_007489110.1| - 0.004 16.9 3.7 0.004 16.9 2.5 2.0 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4 PF00037.22 gi|452208996|ref|YP_007489110.1| - 0.0048 16.4 3.0 0.0048 16.4 2.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452208996|ref|YP_007489110.1| - 0.0097 15.7 8.5 0.026 14.3 5.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452208996|ref|YP_007489110.1| - 0.13 12.7 0.4 0.13 12.7 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452208996|ref|YP_007489110.1| - 1.4 9.7 16.4 1.5 9.6 9.0 2.5 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|452208996|ref|YP_007489110.1| - 2.1 8.9 5.7 0.55 10.8 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452208996|ref|YP_007489110.1| - 4.1 8.2 15.6 1.7 9.3 3.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Lactonase PF10282.4 gi|452208997|ref|YP_007489111.1| - 1.2e-16 60.7 7.5 2.5e-05 23.5 0.5 4.0 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452208997|ref|YP_007489111.1| - 3.4e-13 48.6 7.2 1e-06 27.3 0.7 3.1 1 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.16 gi|452208997|ref|YP_007489111.1| - 1.3e-09 37.5 26.5 0.0046 16.8 0.2 7.5 8 0 0 8 8 8 4 NHL repeat SGL PF08450.7 gi|452208997|ref|YP_007489111.1| - 1.5e-08 34.3 10.2 0.0015 17.9 3.8 4.2 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region PD40 PF07676.7 gi|452208997|ref|YP_007489111.1| - 7.6e-05 22.2 0.8 3 7.5 0.0 4.6 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Kelch_6 PF13964.1 gi|452208997|ref|YP_007489111.1| - 0.00019 21.4 9.3 14 6.0 0.1 6.5 5 2 2 7 7 7 1 Kelch motif Arylesterase PF01731.15 gi|452208997|ref|YP_007489111.1| - 0.00033 20.5 4.3 0.58 10.1 0.1 4.7 3 3 2 5 5 5 1 Arylesterase SBP56 PF05694.6 gi|452208997|ref|YP_007489111.1| - 0.0046 15.5 0.4 3.4 6.0 0.0 3.9 1 1 2 4 4 4 1 56kDa selenium binding protein (SBP56) DUF1513 PF07433.6 gi|452208997|ref|YP_007489111.1| - 0.056 12.3 1.0 1.2 8.0 0.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1513) Ldl_recept_b PF00058.12 gi|452208997|ref|YP_007489111.1| - 0.12 12.6 0.6 43 4.5 0.0 3.5 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B LVIVD PF08309.6 gi|452208998|ref|YP_007489112.1| - 7e-267 860.3 125.4 1.1e-22 78.7 1.4 14.2 12 2 2 14 14 14 14 LVIVD repeat Beta_propel PF09826.4 gi|452208998|ref|YP_007489112.1| - 6.7e-15 54.4 8.6 0.041 12.2 0.5 8.1 1 1 6 7 7 7 6 Beta propeller domain PKD PF00801.15 gi|452208998|ref|YP_007489112.1| - 8.6e-15 54.2 3.5 2.3e-14 52.8 2.4 1.8 1 0 0 1 1 1 1 PKD domain PQQ_2 PF13360.1 gi|452208998|ref|YP_007489112.1| - 4.2e-06 26.4 17.9 0.73 9.2 1.8 6.8 3 2 4 7 7 7 5 PQQ-like domain PQQ_3 PF13570.1 gi|452208998|ref|YP_007489112.1| - 8.4e-05 22.7 92.8 0.17 12.1 2.5 14.2 15 0 0 15 15 15 7 PQQ-like domain DUF4263 PF14082.1 gi|452208998|ref|YP_007489112.1| - 0.0019 18.1 0.0 82 3.1 0.0 6.6 4 3 5 10 10 10 0 Domain of unknown function (DUF4263) CPSF_A PF03178.10 gi|452208998|ref|YP_007489112.1| - 0.0043 16.1 0.9 1 8.3 0.0 3.9 3 1 1 4 4 4 1 CPSF A subunit region DUF1236 PF06823.7 gi|452208998|ref|YP_007489112.1| - 0.76 9.5 22.7 1.5 8.6 0.1 6.9 8 0 0 8 8 8 0 Protein of unknown function (DUF1236) MutL_C PF08676.6 gi|452208998|ref|YP_007489112.1| - 1.9 8.0 3.9 1.7e+02 1.7 0.0 5.2 8 0 0 8 8 8 0 MutL C terminal dimerisation domain UPF0228 PF05727.6 gi|452208999|ref|YP_007489113.1| - 7.4e-35 119.4 5.5 5.5e-32 110.1 3.8 2.2 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0228) Peptidase_C39_2 PF13529.1 gi|452209000|ref|YP_007489114.1| - 1.4e-07 31.9 2.7 1.9e-07 31.5 0.3 2.3 2 1 1 3 3 3 1 Peptidase_C39 like family CENP-H PF05837.7 gi|452209000|ref|YP_007489114.1| - 0.049 13.8 0.4 0.085 13.0 0.3 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Lactonase PF10282.4 gi|452209001|ref|YP_007489115.1| - 1.3e-17 63.8 10.6 9.5e-08 31.4 0.2 3.2 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452209001|ref|YP_007489115.1| - 4.1e-10 38.5 5.4 3.8e-08 32.0 2.8 2.8 1 1 1 2 2 2 1 Cytochrome D1 heme domain SGL PF08450.7 gi|452209001|ref|YP_007489115.1| - 1.2e-09 37.9 13.9 0.00042 19.7 1.4 3.2 1 1 1 2 2 2 2 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|452209001|ref|YP_007489115.1| - 1.4e-08 34.2 20.4 0.024 14.6 0.6 7.4 8 0 0 8 8 8 4 NHL repeat Arylesterase PF01731.15 gi|452209001|ref|YP_007489115.1| - 4.2e-05 23.4 4.6 0.059 13.3 0.1 4.2 2 1 2 4 4 4 2 Arylesterase DUF3312 PF11768.3 gi|452209001|ref|YP_007489115.1| - 0.011 14.0 0.1 0.13 10.4 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3312) Ldl_recept_b PF00058.12 gi|452209001|ref|YP_007489115.1| - 0.016 15.5 0.9 0.13 12.6 0.1 2.9 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B Str_synth PF03088.11 gi|452209001|ref|YP_007489115.1| - 0.047 13.7 0.1 12 6.0 0.0 3.4 2 1 0 3 3 3 0 Strictosidine synthase Me-amine-dh_H PF06433.6 gi|452209001|ref|YP_007489115.1| - 0.05 12.2 6.2 0.46 9.0 0.1 3.7 1 1 2 4 4 4 0 Methylamine dehydrogenase heavy chain (MADH) DUF4102 PF13356.1 gi|452209001|ref|YP_007489115.1| - 0.081 12.8 0.0 63 3.5 0.0 4.2 2 2 3 5 5 5 0 Domain of unknown function (DUF4102) Peptidase_C39_2 PF13529.1 gi|452209002|ref|YP_007489116.1| - 8e-09 36.0 3.3 1.3e-08 35.3 0.1 2.8 2 2 1 3 3 3 1 Peptidase_C39 like family CCG PF02754.11 gi|452209003|ref|YP_007489117.1| - 8.6e-05 22.4 0.1 0.00015 21.6 0.0 1.4 2 0 0 2 2 2 1 Cysteine-rich domain UPF0228 PF05727.6 gi|452209004|ref|YP_007489118.1| - 1e-18 67.2 0.4 1.1e-18 67.1 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) UPF0228 PF05727.6 gi|452209006|ref|YP_007489120.1| - 7.4e-24 83.9 9.1 8.9e-13 48.1 1.7 2.4 2 1 1 3 3 3 2 Uncharacterised protein family (UPF0228) tRNA_anti-like PF12869.2 gi|452209006|ref|YP_007489120.1| - 0.016 14.7 1.8 0.54 9.7 0.1 2.2 2 0 0 2 2 2 0 tRNA_anti-like ETRAMP PF09716.5 gi|452209006|ref|YP_007489120.1| - 0.025 14.5 0.0 0.052 13.4 0.0 1.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Internalin_N PF12354.3 gi|452209006|ref|YP_007489120.1| - 0.37 10.4 2.7 0.73 9.4 1.9 1.5 1 0 0 1 1 1 0 Bacterial adhesion/invasion protein N terminal Peptidase_C39_2 PF13529.1 gi|452209007|ref|YP_007489121.1| - 8.7e-09 35.8 0.6 3.5e-08 33.9 0.4 2.1 1 0 0 1 1 1 1 Peptidase_C39 like family CENP-H PF05837.7 gi|452209007|ref|YP_007489121.1| - 0.031 14.4 0.6 0.077 13.1 0.4 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Lactonase PF10282.4 gi|452209011|ref|YP_007489125.1| - 1.6e-20 73.4 4.2 9.2e-10 38.1 1.6 3.6 1 1 0 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452209011|ref|YP_007489125.1| - 2.6e-11 42.4 6.6 0.00045 18.6 0.1 4.0 1 1 3 4 4 4 3 Cytochrome D1 heme domain SGL PF08450.7 gi|452209011|ref|YP_007489125.1| - 1.6e-07 31.0 10.0 0.0041 16.5 0.6 3.8 1 1 1 3 3 3 3 SMP-30/Gluconolaconase/LRE-like region PD40 PF07676.7 gi|452209011|ref|YP_007489125.1| - 1.4e-06 27.8 0.1 2.8 7.6 0.0 4.9 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.15 gi|452209011|ref|YP_007489125.1| - 5.3e-06 26.3 14.4 0.11 12.5 0.1 6.8 3 2 4 8 8 7 2 Arylesterase NHL PF01436.16 gi|452209011|ref|YP_007489125.1| - 2e-05 24.3 19.1 1.4 9.0 0.0 8.0 9 0 0 9 9 8 2 NHL repeat Thioredox_DsbH PF03190.10 gi|452209011|ref|YP_007489125.1| - 7.8e-05 22.4 0.2 4.2 7.0 0.0 4.2 3 2 1 4 4 4 1 Protein of unknown function, DUF255 DUF1513 PF07433.6 gi|452209011|ref|YP_007489125.1| - 0.0068 15.3 1.8 0.024 13.5 0.1 2.3 1 1 0 2 2 2 1 Protein of unknown function (DUF1513) PQQ_3 PF13570.1 gi|452209011|ref|YP_007489125.1| - 0.017 15.3 24.1 5.1 7.5 0.7 6.7 7 0 0 7 7 6 0 PQQ-like domain PBCV_basic_adap PF08789.5 gi|452209011|ref|YP_007489125.1| - 0.021 14.4 7.4 28 4.4 0.0 5.7 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain SBP56 PF05694.6 gi|452209011|ref|YP_007489125.1| - 0.027 12.9 0.1 25 3.1 0.0 3.9 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) DUF4380 PF14315.1 gi|452209011|ref|YP_007489125.1| - 0.033 13.3 2.4 0.37 9.9 0.2 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4380) Kelch_6 PF13964.1 gi|452209011|ref|YP_007489125.1| - 0.078 13.1 9.9 5.1 7.4 0.1 6.0 5 1 1 6 6 6 0 Kelch motif HIRA_B PF09453.5 gi|452209011|ref|YP_007489125.1| - 0.094 12.2 2.8 12 5.5 0.0 3.5 3 0 0 3 3 3 0 HIRA B motif PapD_N PF00345.15 gi|452209011|ref|YP_007489125.1| - 1.1 9.0 5.1 0.98 9.2 0.2 2.9 3 0 0 3 3 3 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain Aconitase PF00330.15 gi|452209014|ref|YP_007489128.1| - 3.1e-87 293.0 0.7 2.2e-58 197.9 0.0 2.2 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|452209014|ref|YP_007489128.1| - 0.014 13.9 0.0 0.023 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) WH2 PF02205.15 gi|452209014|ref|YP_007489128.1| - 0.082 12.5 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 WH2 motif GIT1_C PF12205.3 gi|452209016|ref|YP_007489130.1| - 0.054 13.3 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term ABC_tran_2 PF12848.2 gi|452209016|ref|YP_007489130.1| - 0.17 11.7 2.0 0.49 10.2 1.4 1.7 1 1 0 1 1 1 0 ABC transporter Mod_r PF07200.8 gi|452209017|ref|YP_007489131.1| - 0.14 12.0 0.0 0.14 12.0 0.0 2.7 3 0 0 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DivIC PF04977.10 gi|452209017|ref|YP_007489131.1| - 4.4 6.8 6.3 0.52 9.8 0.5 2.2 2 0 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.17 gi|452209017|ref|YP_007489131.1| - 8.8 6.4 11.0 0.27 11.2 0.3 2.7 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain T2SF PF00482.18 gi|452209018|ref|YP_007489132.1| - 1.5e-25 89.5 11.5 2.5e-20 72.6 0.0 3.5 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F Rifin_STEVOR PF02009.11 gi|452209018|ref|YP_007489132.1| - 0.012 15.3 0.2 0.02 14.5 0.1 1.4 1 0 0 1 1 1 0 Rifin/stevor family MscS_TM PF12794.2 gi|452209018|ref|YP_007489132.1| - 0.082 11.5 6.9 0.012 14.2 1.7 1.7 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 DUF1673 PF07895.6 gi|452209018|ref|YP_007489132.1| - 0.2 11.1 11.2 0.057 12.9 2.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1673) DUF843 PF05814.6 gi|452209018|ref|YP_007489132.1| - 0.75 9.6 10.3 0.028 14.2 2.7 2.0 2 0 0 2 2 2 0 Baculovirus protein of unknown function (DUF843) Cytochrom_C_asm PF01578.15 gi|452209018|ref|YP_007489132.1| - 0.96 8.9 8.9 0.056 12.9 1.4 2.4 2 1 0 2 2 2 0 Cytochrome C assembly protein T2SE PF00437.15 gi|452209019|ref|YP_007489133.1| - 6.7e-46 156.3 0.0 9.3e-46 155.9 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|452209019|ref|YP_007489133.1| - 7.6e-06 25.3 0.1 2.3e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|452209019|ref|YP_007489133.1| - 0.0026 18.0 0.0 0.01 16.1 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.1 gi|452209019|ref|YP_007489133.1| - 0.082 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain KaiC PF06745.8 gi|452209020|ref|YP_007489134.1| - 3.6e-22 78.5 0.0 4.3e-22 78.3 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|452209020|ref|YP_007489134.1| - 5.8e-11 42.1 0.0 8.7e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|452209020|ref|YP_007489134.1| - 0.00021 21.0 0.0 0.00029 20.6 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase RecA PF00154.16 gi|452209020|ref|YP_007489134.1| - 0.0016 17.5 0.0 0.0027 16.8 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein PAXNEB PF05625.6 gi|452209020|ref|YP_007489134.1| - 0.0076 15.1 0.4 0.018 13.8 0.1 1.6 1 1 1 2 2 2 1 PAXNEB protein AAA_35 PF14516.1 gi|452209020|ref|YP_007489134.1| - 0.013 14.1 0.0 0.021 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_14 PF13173.1 gi|452209020|ref|YP_007489134.1| - 0.015 15.2 0.2 0.052 13.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain DAP3 PF10236.4 gi|452209020|ref|YP_007489134.1| - 0.029 13.3 0.0 0.046 12.6 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Cas_DxTHG PF09455.5 gi|452209020|ref|YP_007489134.1| - 0.042 12.9 0.1 0.057 12.5 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family AAA_22 PF13401.1 gi|452209020|ref|YP_007489134.1| - 0.069 13.3 0.0 0.14 12.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|452209020|ref|YP_007489134.1| - 0.074 12.0 0.3 0.15 11.0 0.2 1.4 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.13 gi|452209020|ref|YP_007489134.1| - 0.086 12.3 0.0 0.21 11.0 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF835 PF05763.7 gi|452209020|ref|YP_007489134.1| - 0.13 11.8 0.3 0.25 10.9 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF835) CobU PF02283.11 gi|452209020|ref|YP_007489134.1| - 0.14 11.5 0.0 15 4.9 0.0 2.3 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase NPP PF08384.5 gi|452209020|ref|YP_007489134.1| - 1.3 8.7 7.7 3.8 7.2 0.4 3.2 3 0 0 3 3 3 0 Pro-opiomelanocortin, N-terminal region Arch_fla_DE PF04659.8 gi|452209023|ref|YP_007489137.1| - 0.00053 19.7 0.1 0.002 17.9 0.0 2.0 1 1 1 2 2 2 1 Archaeal flagella protein TPP_enzyme_C PF02775.16 gi|452209024|ref|YP_007489138.1| - 4.1e-29 101.1 0.0 6.3e-29 100.5 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|452209024|ref|YP_007489138.1| - 7.5e-28 96.2 0.4 1.3e-27 95.5 0.3 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.14 gi|452209025|ref|YP_007489139.1| - 1.2e-55 188.5 0.0 1.7e-55 188.0 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|452209025|ref|YP_007489139.1| - 2.3e-42 144.8 0.0 4.2e-42 143.9 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase MtN3_slv PF03083.11 gi|452209026|ref|YP_007489140.1| - 0.017 14.9 2.5 0.019 14.8 1.7 1.1 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange IncA PF04156.9 gi|452209026|ref|YP_007489140.1| - 9.3 5.7 8.6 9.5 5.7 6.0 1.0 1 0 0 1 1 1 0 IncA protein OrfB_IS605 PF01385.14 gi|452209028|ref|YP_007489142.1| - 7.3e-31 107.3 11.0 3e-19 69.3 0.2 2.7 2 1 1 3 3 3 2 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|452209028|ref|YP_007489142.1| - 2.7e-24 84.6 1.1 3.8e-24 84.1 0.1 1.7 2 0 0 2 2 2 1 Putative transposase DNA-binding domain DZR PF12773.2 gi|452209028|ref|YP_007489142.1| - 0.034 13.9 0.6 0.069 12.9 0.4 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-piccolo PF05715.8 gi|452209028|ref|YP_007489142.1| - 0.037 14.0 0.6 0.071 13.1 0.4 1.4 1 0 0 1 1 1 0 Piccolo Zn-finger Ribosomal_S25 PF03297.10 gi|452209028|ref|YP_007489142.1| - 0.048 13.7 0.8 0.087 12.8 0.6 1.3 1 0 0 1 1 1 0 S25 ribosomal protein A2L_zn_ribbon PF08792.5 gi|452209028|ref|YP_007489142.1| - 0.053 12.9 1.7 0.11 11.9 1.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain HypA PF01155.14 gi|452209028|ref|YP_007489142.1| - 0.054 13.1 0.1 0.14 11.8 0.0 1.8 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Prok-RING_1 PF14446.1 gi|452209028|ref|YP_007489142.1| - 0.42 10.3 3.0 0.35 10.6 0.9 1.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Rubredoxin PF00301.15 gi|452209028|ref|YP_007489142.1| - 0.51 10.2 6.3 7 6.6 4.4 2.4 1 1 0 1 1 1 0 Rubredoxin zf-RanBP PF00641.13 gi|452209028|ref|YP_007489142.1| - 0.71 9.0 6.8 5.2 6.2 0.1 2.4 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.11 gi|452209029|ref|YP_007489143.1| - 3e-33 114.2 1.6 3.4e-33 114.0 1.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like DUF1699 PF08004.6 gi|452209030|ref|YP_007489144.1| - 3e-45 152.9 0.4 3.4e-45 152.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Metalloenzyme PF01676.13 gi|452209030|ref|YP_007489144.1| - 0.032 13.6 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 Metalloenzyme superfamily Nicastrin PF05450.10 gi|452209030|ref|YP_007489144.1| - 0.036 13.3 0.1 0.04 13.1 0.0 1.0 1 0 0 1 1 1 0 Nicastrin Nucleopor_Nup85 PF07575.8 gi|452209030|ref|YP_007489144.1| - 0.047 11.8 0.3 0.052 11.7 0.2 1.0 1 0 0 1 1 1 0 Nup85 Nucleoporin DUF2666 PF10869.3 gi|452209030|ref|YP_007489144.1| - 0.055 13.4 0.3 0.058 13.4 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF1759 PF03564.10 gi|452209030|ref|YP_007489144.1| - 0.074 12.8 0.7 0.089 12.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Histidinol_dh PF00815.15 gi|452209031|ref|YP_007489145.1| - 1.8e-169 563.7 4.2 2.2e-169 563.4 2.9 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Peptidase_S68 PF10461.4 gi|452209031|ref|YP_007489145.1| - 0.065 12.9 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Peptidase S68 CEP1-DNA_bind PF09287.5 gi|452209033|ref|YP_007489147.1| - 0.014 14.8 0.2 0.014 14.8 0.2 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding BacA PF02673.13 gi|452209034|ref|YP_007489148.1| - 0.0073 15.5 0.1 0.0079 15.4 0.1 1.1 1 0 0 1 1 1 1 Bacitracin resistance protein BacA ATPase_gene1 PF09527.5 gi|452209034|ref|YP_007489148.1| - 0.11 12.2 1.8 0.22 11.3 1.2 1.4 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit (ATPase_gene1) Lactamase_B_2 PF12706.2 gi|452209035|ref|YP_007489149.1| - 4e-10 39.5 0.4 1.2e-09 38.0 0.1 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452209035|ref|YP_007489149.1| - 0.00038 20.1 2.3 0.0011 18.7 1.5 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|452209035|ref|YP_007489149.1| - 0.0016 18.1 0.1 0.0064 16.2 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain N6_Mtase PF02384.11 gi|452209036|ref|YP_007489150.1| - 1.5e-83 280.4 0.1 2e-83 280.0 0.1 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|452209036|ref|YP_007489150.1| - 1.4e-17 64.4 1.2 2.9e-17 63.3 0.8 1.6 1 0 0 1 1 1 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|452209036|ref|YP_007489150.1| - 3.9e-07 30.1 0.0 8.9e-07 28.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452209036|ref|YP_007489150.1| - 0.00062 19.3 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 TetR_N PF00440.18 gi|452209037|ref|YP_007489151.1| - 0.016 14.8 0.0 0.25 11.0 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family TetR_C_5 PF08360.6 gi|452209037|ref|YP_007489151.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.4 1 1 0 1 1 1 0 QacR-like protein, C-terminal region DUF1638 PF07796.6 gi|452209038|ref|YP_007489152.1| - 7.3e-38 129.8 0.0 9.7e-38 129.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Imm46 PF15585.1 gi|452209038|ref|YP_007489152.1| - 0.069 13.2 0.0 0.23 11.5 0.0 1.9 2 0 0 2 2 2 0 Immunity protein 46 ERCC4 PF02732.10 gi|452209038|ref|YP_007489152.1| - 0.1 12.3 0.3 0.18 11.5 0.2 1.4 1 0 0 1 1 1 0 ERCC4 domain DUF1638 PF07796.6 gi|452209039|ref|YP_007489153.1| - 4.3e-33 114.2 0.0 4.8e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1699 PF08004.6 gi|452209040|ref|YP_007489154.1| - 3.2e-29 101.0 0.6 3.6e-29 100.9 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Thioredoxin PF00085.15 gi|452209041|ref|YP_007489155.1| - 1.6e-13 50.2 0.1 1.7e-13 50.1 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin KaiB PF07689.7 gi|452209041|ref|YP_007489155.1| - 2.4e-06 26.9 0.0 2.6e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 KaiB domain Thioredoxin_3 PF13192.1 gi|452209041|ref|YP_007489155.1| - 4.6e-06 26.3 0.1 5.3e-06 26.1 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain HyaE PF07449.6 gi|452209041|ref|YP_007489155.1| - 3.7e-05 23.5 0.0 4.1e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_2 PF13098.1 gi|452209041|ref|YP_007489155.1| - 6.3e-05 23.1 0.0 7.4e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain ABC_transp_aux PF09822.4 gi|452209041|ref|YP_007489155.1| - 0.00017 21.1 0.0 0.00019 21.0 0.0 1.0 1 0 0 1 1 1 1 ABC-type uncharacterized transport system Thioredoxin_6 PF13848.1 gi|452209041|ref|YP_007489155.1| - 0.00081 19.2 0.0 0.00085 19.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.9 gi|452209041|ref|YP_007489155.1| - 0.0019 18.4 0.1 0.0022 18.2 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.19 gi|452209041|ref|YP_007489155.1| - 0.0029 17.5 0.1 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_8 PF13905.1 gi|452209041|ref|YP_007489155.1| - 0.0048 16.9 0.1 0.036 14.1 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like TraF PF13728.1 gi|452209041|ref|YP_007489155.1| - 0.011 15.2 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_4 PF13462.1 gi|452209041|ref|YP_007489155.1| - 0.021 14.8 0.0 0.03 14.3 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin Thioredoxin_9 PF14595.1 gi|452209041|ref|YP_007489155.1| - 0.027 14.0 0.0 0.028 13.9 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin DSBA PF01323.15 gi|452209041|ref|YP_007489155.1| - 0.029 13.9 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 DSBA-like thioredoxin domain TrbC_Ftype PF09673.5 gi|452209041|ref|YP_007489155.1| - 0.032 13.8 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein F420_ligase PF01996.11 gi|452209042|ref|YP_007489156.1| - 4.4e-61 205.8 0.0 5.1e-61 205.6 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase MTHFR PF02219.12 gi|452209044|ref|YP_007489158.1| - 8.9e-38 129.9 0.0 1e-37 129.8 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.3 gi|452209045|ref|YP_007489159.1| - 9.5e-32 108.4 1.2 9.5e-32 108.4 0.8 1.7 2 0 0 2 2 2 1 Methylene-tetrahydrofolate reductase C terminal PrmA PF06325.8 gi|452209045|ref|YP_007489159.1| - 0.14 11.2 0.1 0.2 10.7 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) THF_DHG_CYH_C PF02882.14 gi|452209046|ref|YP_007489160.1| - 7.1e-65 216.9 2.6 9.2e-65 216.6 1.8 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 gi|452209046|ref|YP_007489160.1| - 6.7e-42 142.2 0.0 9.6e-42 141.7 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.16 gi|452209046|ref|YP_007489160.1| - 0.046 13.5 1.0 2.1 8.1 0.7 2.2 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SHMT PF00464.14 gi|452209047|ref|YP_007489161.1| - 4.4e-177 588.4 0.2 5.1e-177 588.1 0.1 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.16 gi|452209047|ref|YP_007489161.1| - 9.5e-10 37.9 0.0 1.3e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|452209047|ref|YP_007489161.1| - 2.3e-07 30.2 0.0 3.8e-07 29.5 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.14 gi|452209047|ref|YP_007489161.1| - 0.00083 18.1 0.0 0.0019 17.0 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|452209047|ref|YP_007489161.1| - 0.01 14.9 0.1 0.017 14.1 0.1 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.15 gi|452209047|ref|YP_007489161.1| - 0.046 12.2 0.0 0.099 11.1 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.15 gi|452209047|ref|YP_007489161.1| - 0.074 11.3 0.0 0.11 10.8 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Formyl_trans_N PF00551.14 gi|452209048|ref|YP_007489162.1| - 4.6e-57 192.4 0.0 5.3e-57 192.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase HTH_3 PF01381.17 gi|452209049|ref|YP_007489163.1| - 1.8e-08 34.0 0.1 5.7e-08 32.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|452209049|ref|YP_007489163.1| - 1.6e-07 31.2 0.0 6.8e-07 29.2 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|452209049|ref|YP_007489163.1| - 0.00015 21.8 0.0 0.00031 20.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209049|ref|YP_007489163.1| - 0.0031 17.1 0.2 0.013 15.1 0.1 2.1 2 0 0 2 2 2 1 HTH domain MerR PF00376.18 gi|452209049|ref|YP_007489163.1| - 0.0043 16.5 0.1 0.013 15.0 0.0 1.9 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.1 gi|452209049|ref|YP_007489163.1| - 0.0048 16.6 0.0 0.012 15.3 0.0 1.7 1 0 0 1 1 1 1 MerR HTH family regulatory protein NAD_synthase PF02540.12 gi|452209050|ref|YP_007489164.1| - 5.7e-87 290.6 0.0 6.6e-87 290.4 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|452209050|ref|YP_007489164.1| - 2.4e-05 23.0 0.0 5.1e-05 22.0 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|452209050|ref|YP_007489164.1| - 0.0034 16.9 0.0 0.0047 16.4 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|452209050|ref|YP_007489164.1| - 0.044 13.0 0.0 0.14 11.4 0.0 1.7 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC AAA PF00004.24 gi|452209052|ref|YP_007489166.1| - 1.7e-97 322.6 0.0 1.8e-47 160.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|452209052|ref|YP_007489166.1| - 1.5e-29 101.7 0.4 6.3e-29 99.7 0.1 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.7 gi|452209052|ref|YP_007489166.1| - 1.9e-15 56.5 0.0 5.6e-08 32.1 0.0 3.0 2 2 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus CDC48_2 PF02933.12 gi|452209052|ref|YP_007489166.1| - 8.1e-15 54.2 0.2 1.1e-13 50.5 0.3 2.6 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.9 gi|452209052|ref|YP_007489166.1| - 3.3e-14 52.7 0.2 1.2e-05 25.0 0.0 3.5 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|452209052|ref|YP_007489166.1| - 6.5e-14 52.1 0.6 0.00069 19.7 0.0 4.1 2 2 1 3 3 3 3 AAA domain AAA_2 PF07724.9 gi|452209052|ref|YP_007489166.1| - 4.6e-13 49.4 0.1 5.7e-05 23.0 0.0 3.1 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_17 PF13207.1 gi|452209052|ref|YP_007489166.1| - 4.8e-12 46.7 0.1 0.00019 22.2 0.0 3.5 3 1 0 3 3 2 2 AAA domain AAA_14 PF13173.1 gi|452209052|ref|YP_007489166.1| - 8.3e-12 45.1 0.0 6.3e-05 22.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|452209052|ref|YP_007489166.1| - 2.6e-11 43.8 0.0 0.00038 20.4 0.0 3.1 2 2 0 2 2 2 2 AAA ATPase domain TIP49 PF06068.8 gi|452209052|ref|YP_007489166.1| - 4e-11 42.2 0.7 3.4e-06 26.0 0.0 2.9 2 1 0 2 2 2 2 TIP49 C-terminus IstB_IS21 PF01695.12 gi|452209052|ref|YP_007489166.1| - 1.7e-09 37.3 0.0 0.00082 18.8 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.1 gi|452209052|ref|YP_007489166.1| - 9.6e-09 35.2 0.0 0.0041 16.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|452209052|ref|YP_007489166.1| - 1e-08 35.5 0.1 0.0046 17.2 0.0 3.0 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|452209052|ref|YP_007489166.1| - 1.4e-08 34.3 1.1 0.0035 17.0 0.0 2.7 2 0 0 2 2 2 2 Part of AAA domain AAA_25 PF13481.1 gi|452209052|ref|YP_007489166.1| - 1.1e-07 31.5 4.7 0.08 12.3 0.1 4.4 2 2 0 4 4 4 3 AAA domain Zeta_toxin PF06414.7 gi|452209052|ref|YP_007489166.1| - 1.9e-07 30.4 0.0 0.0047 16.0 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin Sigma54_activat PF00158.21 gi|452209052|ref|YP_007489166.1| - 4.3e-07 29.5 0.2 0.018 14.5 0.0 3.7 3 1 0 3 3 3 2 Sigma-54 interaction domain AAA_28 PF13521.1 gi|452209052|ref|YP_007489166.1| - 1.1e-06 28.6 0.0 0.045 13.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|452209052|ref|YP_007489166.1| - 1.1e-06 27.9 0.3 0.03 13.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|452209052|ref|YP_007489166.1| - 1.9e-06 27.9 0.0 0.077 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Arch_ATPase PF01637.13 gi|452209052|ref|YP_007489166.1| - 2.4e-06 27.4 0.1 0.036 13.7 0.0 3.4 2 1 0 2 2 2 2 Archaeal ATPase Parvo_NS1 PF01057.12 gi|452209052|ref|YP_007489166.1| - 1.1e-05 24.4 0.1 0.096 11.5 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.1 gi|452209052|ref|YP_007489166.1| - 1.7e-05 24.8 0.0 0.19 11.7 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain PhoH PF02562.11 gi|452209052|ref|YP_007489166.1| - 1.8e-05 24.0 0.6 0.24 10.6 0.0 3.0 3 0 0 3 3 2 2 PhoH-like protein KaiC PF06745.8 gi|452209052|ref|YP_007489166.1| - 1.9e-05 23.8 3.5 0.029 13.4 0.0 4.0 2 2 1 4 4 4 1 KaiC NB-ARC PF00931.17 gi|452209052|ref|YP_007489166.1| - 2.5e-05 23.2 0.0 0.12 11.2 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain ABC_tran PF00005.22 gi|452209052|ref|YP_007489166.1| - 3.6e-05 24.0 0.1 0.31 11.3 0.0 3.0 3 0 0 3 3 2 2 ABC transporter AAA_24 PF13479.1 gi|452209052|ref|YP_007489166.1| - 6.5e-05 22.6 1.0 0.36 10.3 0.1 2.6 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.6 gi|452209052|ref|YP_007489166.1| - 6.8e-05 22.4 0.0 0.6 9.7 0.0 3.0 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.4 gi|452209052|ref|YP_007489166.1| - 7.2e-05 21.9 0.0 0.17 10.8 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.8 gi|452209052|ref|YP_007489166.1| - 0.00019 20.4 0.0 0.16 10.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ATP-synt_ab PF00006.20 gi|452209052|ref|YP_007489166.1| - 0.00026 20.5 0.0 0.094 12.2 0.0 2.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain NTPase_1 PF03266.10 gi|452209052|ref|YP_007489166.1| - 0.00057 19.6 1.3 3.3 7.4 0.0 3.7 2 1 1 3 3 3 0 NTPase Cytidylate_kin2 PF13189.1 gi|452209052|ref|YP_007489166.1| - 0.00079 19.3 0.0 0.54 10.1 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_11 PF13086.1 gi|452209052|ref|YP_007489166.1| - 0.0011 18.5 0.0 0.74 9.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain NACHT PF05729.7 gi|452209052|ref|YP_007489166.1| - 0.0012 18.5 1.4 4.4 6.9 0.0 4.0 5 0 0 5 5 4 0 NACHT domain T2SE PF00437.15 gi|452209052|ref|YP_007489166.1| - 0.0019 17.1 0.0 0.16 10.8 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.1 gi|452209052|ref|YP_007489166.1| - 0.0026 17.3 1.1 2.5 7.6 0.0 3.0 3 0 0 3 3 3 1 AAA domain ResIII PF04851.10 gi|452209052|ref|YP_007489166.1| - 0.003 17.4 0.1 0.91 9.3 0.0 2.9 2 1 1 3 3 2 1 Type III restriction enzyme, res subunit Bac_DnaA PF00308.13 gi|452209052|ref|YP_007489166.1| - 0.0033 17.0 0.0 2.1 7.9 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein SKI PF01202.17 gi|452209052|ref|YP_007489166.1| - 0.0036 17.1 0.1 2 8.2 0.0 2.9 3 0 0 3 3 2 1 Shikimate kinase IPT PF01745.11 gi|452209052|ref|YP_007489166.1| - 0.0039 16.4 0.1 1.1 8.3 0.0 2.7 2 0 0 2 2 2 1 Isopentenyl transferase Guanylate_kin PF00625.16 gi|452209052|ref|YP_007489166.1| - 0.0056 16.1 0.1 5.6 6.3 0.0 4.0 2 2 2 4 4 4 0 Guanylate kinase UPF0079 PF02367.12 gi|452209052|ref|YP_007489166.1| - 0.0072 15.9 0.2 5.4 6.6 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised P-loop hydrolase UPF0079 Viral_helicase1 PF01443.13 gi|452209052|ref|YP_007489166.1| - 0.018 14.5 0.0 0.14 11.7 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Vps4_C PF09336.5 gi|452209052|ref|YP_007489166.1| - 0.022 14.6 0.1 0.32 10.9 0.0 2.5 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain AAA_23 PF13476.1 gi|452209052|ref|YP_007489166.1| - 0.024 14.9 0.8 11 6.2 0.0 3.1 3 0 0 3 3 3 0 AAA domain KAP_NTPase PF07693.9 gi|452209052|ref|YP_007489166.1| - 0.048 12.6 0.1 3.4 6.5 0.0 3.1 3 1 1 4 4 4 0 KAP family P-loop domain KTI12 PF08433.5 gi|452209052|ref|YP_007489166.1| - 0.059 12.5 0.0 10 5.1 0.0 2.5 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_21 PF13304.1 gi|452209052|ref|YP_007489166.1| - 0.45 10.4 1.1 40 4.0 0.3 3.1 2 1 1 3 3 3 0 AAA domain PRC PF05239.11 gi|452209053|ref|YP_007489167.1| - 1.1e-16 60.4 0.1 1.2e-16 60.3 0.1 1.0 1 0 0 1 1 1 1 PRC-barrel domain Methyltransf_11 PF08241.7 gi|452209054|ref|YP_007489168.1| - 7.2e-12 45.6 0.0 1.2e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452209054|ref|YP_007489168.1| - 2.5e-11 43.1 0.0 3.4e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.2 gi|452209054|ref|YP_007489168.1| - 9.7e-10 39.0 0.0 3.5e-09 37.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209054|ref|YP_007489168.1| - 2.4e-09 36.9 0.0 4.7e-09 36.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209054|ref|YP_007489168.1| - 2.8e-08 33.6 0.0 3.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209054|ref|YP_007489168.1| - 1.9e-05 24.9 0.0 3.2e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452209054|ref|YP_007489168.1| - 2e-05 24.6 0.0 3.4e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|452209054|ref|YP_007489168.1| - 2.1e-05 23.7 0.0 3.1e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.7 gi|452209054|ref|YP_007489168.1| - 6.3e-05 23.3 0.0 0.00011 22.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452209054|ref|YP_007489168.1| - 8.1e-05 22.0 0.0 0.00012 21.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.14 gi|452209054|ref|YP_007489168.1| - 0.00054 19.5 0.0 0.00097 18.7 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.1 gi|452209054|ref|YP_007489168.1| - 0.0012 18.5 0.0 0.0023 17.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|452209054|ref|YP_007489168.1| - 0.0032 16.6 0.0 0.0073 15.4 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|452209054|ref|YP_007489168.1| - 0.0032 16.5 0.0 0.0048 15.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|452209054|ref|YP_007489168.1| - 0.0045 17.7 0.0 0.012 16.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209054|ref|YP_007489168.1| - 0.018 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.4 gi|452209054|ref|YP_007489168.1| - 0.039 13.4 0.1 0.068 12.6 0.0 1.5 1 1 0 1 1 1 0 Putative methyltransferase TPMT PF05724.6 gi|452209054|ref|YP_007489168.1| - 0.054 12.9 0.0 0.068 12.5 0.0 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MetW PF07021.7 gi|452209054|ref|YP_007489168.1| - 0.082 12.2 0.2 0.14 11.5 0.0 1.5 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW GrpB PF04229.9 gi|452209055|ref|YP_007489169.1| - 2.2e-51 173.8 0.0 2.5e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 GrpB protein Kinesin-related PF06548.6 gi|452209055|ref|YP_007489169.1| - 0.14 10.6 0.0 0.18 10.3 0.0 1.1 1 0 0 1 1 1 0 Kinesin-related APG6 PF04111.7 gi|452209056|ref|YP_007489170.1| - 2.3 7.1 5.5 2.3 7.1 3.8 1.0 1 0 0 1 1 1 0 Autophagy protein Apg6 Cupin_2 PF07883.6 gi|452209057|ref|YP_007489171.1| - 1.2e-06 27.8 0.0 2.7e-06 26.7 0.0 1.6 1 1 1 2 2 2 1 Cupin domain AraC_binding PF02311.14 gi|452209057|ref|YP_007489171.1| - 4.9e-05 23.0 0.0 0.0001 22.0 0.0 1.5 1 1 1 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|452209057|ref|YP_007489171.1| - 0.015 14.6 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) MannoseP_isomer PF01050.13 gi|452209057|ref|YP_007489171.1| - 0.055 13.0 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase DUF2795 PF11387.3 gi|452209059|ref|YP_007489173.1| - 9.3e-18 63.8 0.0 1.2e-17 63.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) Transglut_core PF01841.14 gi|452209060|ref|YP_007489174.1| - 2.3e-13 50.3 0.0 3.3e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily Hydrolase_3 PF08282.7 gi|452209061|ref|YP_007489175.1| - 6.4e-30 104.5 2.3 1.8e-21 76.8 0.2 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|452209061|ref|YP_007489175.1| - 2.4e-08 33.5 0.0 1.2e-06 27.9 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.2 gi|452209061|ref|YP_007489175.1| - 1.4e-06 28.6 0.2 0.00035 20.7 0.0 2.6 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452209061|ref|YP_007489175.1| - 6.6e-05 23.4 5.3 0.059 13.7 1.4 2.9 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.11 gi|452209061|ref|YP_007489175.1| - 0.00085 18.2 0.0 0.0015 17.5 0.0 1.4 1 0 0 1 1 1 1 Trehalose-phosphatase Rad51 PF08423.6 gi|452209062|ref|YP_007489176.1| - 6.5e-90 300.5 0.1 8e-90 300.1 0.1 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.1 gi|452209062|ref|YP_007489176.1| - 1.3e-14 54.1 1.1 3.4e-14 52.7 0.8 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_25 PF13481.1 gi|452209062|ref|YP_007489176.1| - 4.9e-10 39.1 0.0 7.5e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|452209062|ref|YP_007489176.1| - 2.2e-08 33.5 0.1 7.2e-07 28.5 0.1 2.1 1 1 0 1 1 1 1 recA bacterial DNA recombination protein KaiC PF06745.8 gi|452209062|ref|YP_007489176.1| - 4e-07 29.3 0.1 6.5e-07 28.6 0.1 1.3 1 0 0 1 1 1 1 KaiC HHH PF00633.18 gi|452209062|ref|YP_007489176.1| - 1e-06 28.0 3.8 0.0013 18.3 0.2 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|452209062|ref|YP_007489176.1| - 2.9e-06 27.0 0.2 6.4e-06 25.9 0.2 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.3 gi|452209062|ref|YP_007489176.1| - 0.00014 21.7 0.0 0.00034 20.4 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.3 gi|452209062|ref|YP_007489176.1| - 0.00058 19.7 0.0 0.0034 17.3 0.0 2.4 2 0 0 2 2 2 1 IMS family HHH motif AAA_22 PF13401.1 gi|452209062|ref|YP_007489176.1| - 0.0012 18.9 0.0 0.0025 17.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain DNA_pol_lambd_f PF10391.4 gi|452209062|ref|YP_007489176.1| - 0.002 17.6 0.0 0.0065 15.9 0.0 1.9 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH_8 PF14716.1 gi|452209062|ref|YP_007489176.1| - 0.0039 17.3 0.2 0.35 11.0 0.0 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_3 PF12836.2 gi|452209062|ref|YP_007489176.1| - 0.016 15.1 0.1 3 7.8 0.0 2.6 1 1 1 2 2 2 0 Helix-hairpin-helix motif ATP-synt_ab PF00006.20 gi|452209062|ref|YP_007489176.1| - 0.028 13.9 0.0 0.058 12.8 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF4332 PF14229.1 gi|452209062|ref|YP_007489176.1| - 0.031 14.2 0.0 0.071 13.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) AAA_24 PF13479.1 gi|452209062|ref|YP_007489176.1| - 0.033 13.7 0.0 0.062 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain BAF PF02961.9 gi|452209062|ref|YP_007489176.1| - 0.039 14.2 0.0 0.63 10.3 0.0 2.3 2 0 0 2 2 2 0 Barrier to autointegration factor NACHT PF05729.7 gi|452209062|ref|YP_007489176.1| - 0.043 13.4 0.0 0.09 12.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain TrwB_AAD_bind PF10412.4 gi|452209062|ref|YP_007489176.1| - 0.068 11.7 0.1 0.11 11.0 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.4 gi|452209062|ref|YP_007489176.1| - 0.087 11.7 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) UPF0079 PF02367.12 gi|452209062|ref|YP_007489176.1| - 0.1 12.2 0.1 0.24 11.0 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 CTP_transf_2 PF01467.21 gi|452209063|ref|YP_007489177.1| - 7.2e-13 48.8 0.0 1.4e-12 47.9 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase Nefa_Nip30_N PF10187.4 gi|452209064|ref|YP_007489178.1| - 1.1 9.4 3.5 4.4 7.5 0.9 2.1 1 1 1 2 2 2 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 AP_endonuc_2 PF01261.19 gi|452209065|ref|YP_007489179.1| - 4.7e-20 71.8 0.1 5.8e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Meth_synt_2 PF01717.13 gi|452209066|ref|YP_007489180.1| - 3.8e-06 26.1 0.0 0.02 13.8 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain AAA PF00004.24 gi|452209066|ref|YP_007489180.1| - 0.094 12.9 0.2 0.094 12.9 0.1 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.22 gi|452209067|ref|YP_007489181.1| - 2.1e-32 112.2 0.0 3.2e-32 111.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209067|ref|YP_007489181.1| - 2.7e-15 57.0 0.6 3.8e-09 36.9 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452209067|ref|YP_007489181.1| - 2.3e-07 30.2 0.0 4.4e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452209067|ref|YP_007489181.1| - 1.6e-05 24.1 0.1 0.00073 18.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|452209067|ref|YP_007489181.1| - 0.00015 21.2 0.1 0.0003 20.2 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|452209067|ref|YP_007489181.1| - 0.00071 18.1 0.7 0.46 8.8 0.1 2.1 2 0 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|452209067|ref|YP_007489181.1| - 0.0034 16.5 0.0 0.0073 15.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|452209067|ref|YP_007489181.1| - 0.008 16.5 0.2 0.017 15.4 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|452209067|ref|YP_007489181.1| - 0.089 12.7 0.1 0.38 10.6 0.1 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Pr_beta_C PF12465.3 gi|452209067|ref|YP_007489181.1| - 0.12 11.6 0.0 0.24 10.6 0.0 1.5 1 0 0 1 1 1 0 Proteasome beta subunits C terminal CbiQ PF02361.11 gi|452209068|ref|YP_007489182.1| - 1.6e-34 119.4 12.1 2.6e-34 118.7 8.4 1.3 1 0 0 1 1 1 1 Cobalt transport protein CbiN PF02553.10 gi|452209069|ref|YP_007489183.1| - 5.3e-27 93.6 0.2 6.8e-27 93.2 0.1 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN DUF3989 PF13150.1 gi|452209069|ref|YP_007489183.1| - 0.13 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) CbiM PF01891.11 gi|452209070|ref|YP_007489184.1| - 1.1e-52 178.5 21.7 1.3e-52 178.4 15.0 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region YqzM PF14141.1 gi|452209070|ref|YP_007489184.1| - 0.93 9.3 6.2 0.25 11.1 0.9 2.4 2 0 0 2 2 2 0 YqzM-like protein SNARE_assoc PF09335.6 gi|452209071|ref|YP_007489185.1| - 1.4e-20 73.7 5.2 1.4e-20 73.7 3.6 1.6 1 1 1 2 2 2 1 SNARE associated Golgi protein DUF4112 PF13430.1 gi|452209071|ref|YP_007489185.1| - 0.094 12.6 0.1 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) S-layer PF07752.6 gi|452209073|ref|YP_007489187.1| - 4e-187 619.4 28.6 1.1e-94 316.5 6.8 2.8 3 0 0 3 3 3 2 S-layer protein CARDB PF07705.6 gi|452209073|ref|YP_007489187.1| - 4.1e-10 39.6 2.0 1.1e-09 38.2 0.6 2.4 2 0 0 2 2 2 1 CARDB DUF4480 PF13715.1 gi|452209073|ref|YP_007489187.1| - 4.9e-09 36.1 1.7 1.9e-06 27.8 0.4 4.0 3 1 1 4 4 4 1 Domain of unknown function (DUF4480) CarboxypepD_reg PF13620.1 gi|452209073|ref|YP_007489187.1| - 9.6e-08 31.9 10.5 4.4e-06 26.6 0.3 4.7 5 0 0 5 5 5 1 Carboxypeptidase regulatory-like domain tRNA-synt_1c_C PF03950.13 gi|452209073|ref|YP_007489187.1| - 0.005 16.5 0.1 1.4 8.5 0.0 3.6 4 0 0 4 4 4 1 tRNA synthetases class I (E and Q), anti-codon binding domain Cupredoxin_1 PF13473.1 gi|452209073|ref|YP_007489187.1| - 0.0096 15.8 1.9 0.13 12.2 0.2 3.4 4 1 1 5 5 5 1 Cupredoxin-like domain DUF824 PF05688.6 gi|452209073|ref|YP_007489187.1| - 0.011 15.3 1.6 18 5.0 0.1 3.9 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) DUF499 PF04465.7 gi|452209073|ref|YP_007489187.1| - 0.018 12.6 0.8 0.027 12.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF499) YtkA PF13115.1 gi|452209073|ref|YP_007489187.1| - 0.029 14.7 6.8 0.93 9.8 0.0 3.9 4 1 0 4 4 3 0 YtkA-like A2M PF00207.17 gi|452209073|ref|YP_007489187.1| - 0.04 13.4 0.1 1.5 8.4 0.0 3.2 3 0 0 3 3 3 0 Alpha-2-macroglobulin family DUF3380 PF11860.3 gi|452209073|ref|YP_007489187.1| - 0.17 11.9 0.5 14 5.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3380) TonB_2 PF13103.1 gi|452209073|ref|YP_007489187.1| - 0.2 11.7 2.2 3.4 7.7 0.1 3.6 4 0 0 4 4 4 0 TonB C terminal Fn3-like PF14310.1 gi|452209073|ref|YP_007489187.1| - 0.21 11.5 1.6 2.1 8.3 0.2 3.0 2 1 0 2 2 2 0 Fibronectin type III-like domain DUF165 PF02592.10 gi|452209074|ref|YP_007489188.1| - 4e-44 150.3 5.4 4e-44 150.3 3.7 2.0 2 0 0 2 2 2 1 Uncharacterized ACR, YhhQ family COG1738 BioY PF02632.9 gi|452209074|ref|YP_007489188.1| - 0.026 14.1 6.0 0.055 13.1 4.2 1.6 1 0 0 1 1 1 0 BioY family Prion_bPrPp PF11587.3 gi|452209074|ref|YP_007489188.1| - 0.036 13.7 0.4 5 6.8 0.0 2.6 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal DUF3382 PF11862.3 gi|452209074|ref|YP_007489188.1| - 0.061 13.2 1.3 0.09 12.6 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) Phytoreo_Pns PF05451.6 gi|452209074|ref|YP_007489188.1| - 0.088 11.4 1.1 0.13 10.8 0.8 1.2 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 tRNA_NucTransf2 PF09249.6 gi|452209075|ref|YP_007489189.1| - 3.1e-45 152.6 0.0 6.3e-45 151.7 0.0 1.5 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|452209075|ref|YP_007489189.1| - 2e-10 40.8 0.1 2e-09 37.6 0.0 2.7 3 1 0 3 3 3 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|452209075|ref|YP_007489189.1| - 0.018 15.0 0.0 0.041 13.9 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm OAS1_C PF10421.4 gi|452209075|ref|YP_007489189.1| - 0.035 13.5 0.0 0.16 11.4 0.0 1.9 1 1 1 2 2 2 0 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus ETRAMP PF09716.5 gi|452209076|ref|YP_007489190.1| - 0.16 11.9 1.8 0.63 10.0 1.3 2.0 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) OGG_N PF07934.7 gi|452209077|ref|YP_007489191.1| - 4.3e-28 97.6 0.4 8.9e-28 96.6 0.1 1.6 2 0 0 2 2 2 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.20 gi|452209077|ref|YP_007489191.1| - 8.5e-08 32.4 0.0 2.8e-07 30.8 0.0 1.7 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|452209077|ref|YP_007489191.1| - 0.0065 16.1 0.0 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif zf-CCHC_2 PF13696.1 gi|452209078|ref|YP_007489192.1| - 0.09 12.2 0.3 0.09 12.2 0.2 1.8 2 0 0 2 2 2 0 Zinc knuckle ArgJ PF01960.13 gi|452209079|ref|YP_007489193.1| - 1.6e-139 464.5 2.4 1.9e-139 464.3 1.7 1.0 1 0 0 1 1 1 1 ArgJ family Bcl-2 PF00452.14 gi|452209079|ref|YP_007489193.1| - 0.15 12.1 0.0 0.29 11.2 0.0 1.6 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family CBS PF00571.23 gi|452209080|ref|YP_007489194.1| - 8.8e-37 124.6 1.8 1e-18 66.8 0.1 2.1 2 0 0 2 2 2 2 CBS domain Semialdhyde_dh PF01118.19 gi|452209081|ref|YP_007489195.1| - 7.2e-32 110.2 0.0 1.2e-31 109.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|452209081|ref|YP_007489195.1| - 1.4e-24 86.9 0.0 1.8e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|452209081|ref|YP_007489195.1| - 0.0042 17.5 0.0 0.016 15.6 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold DUF1628 PF07790.6 gi|452209082|ref|YP_007489196.1| - 1.1e-08 35.7 0.1 2e-08 34.8 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Nuc_deoxyrib_tr PF05014.10 gi|452209083|ref|YP_007489197.1| - 3.2e-34 117.2 0.1 3.7e-34 116.9 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase TIR_2 PF13676.1 gi|452209083|ref|YP_007489197.1| - 0.003 17.6 0.0 0.0083 16.2 0.0 1.7 1 1 0 1 1 1 1 TIR domain DUF4406 PF14359.1 gi|452209083|ref|YP_007489197.1| - 0.0033 17.4 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4406) DUF2872 PF11071.3 gi|452209083|ref|YP_007489197.1| - 0.022 14.6 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2872) Mn_catalase PF05067.7 gi|452209083|ref|YP_007489197.1| - 0.083 11.6 0.0 0.098 11.3 0.0 1.2 1 0 0 1 1 1 0 Manganese containing catalase Transferrin PF00405.12 gi|452209083|ref|YP_007489197.1| - 0.086 11.7 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Transferrin Acetyltransf_10 PF13673.1 gi|452209085|ref|YP_007489199.1| - 1.3e-07 31.7 0.0 1.7e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|452209085|ref|YP_007489199.1| - 1.7e-07 31.2 0.0 2.8e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452209085|ref|YP_007489199.1| - 2.2e-06 27.6 0.2 1.4e-05 24.9 0.1 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.1 gi|452209085|ref|YP_007489199.1| - 0.0012 18.6 0.0 0.026 14.3 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452209085|ref|YP_007489199.1| - 0.0021 18.2 0.0 0.0028 17.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain TPR_11 PF13414.1 gi|452209086|ref|YP_007489200.1| - 0.042 13.4 0.4 0.16 11.6 0.3 1.9 1 0 0 1 1 1 0 TPR repeat Spore_coat_CotO PF14153.1 gi|452209086|ref|YP_007489200.1| - 8.3 5.8 12.0 21 4.4 8.3 1.7 1 1 0 1 1 1 0 Spore coat protein CotO HSP20 PF00011.16 gi|452209088|ref|YP_007489202.1| - 6.5e-22 77.3 0.9 8.3e-22 76.9 0.6 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452209088|ref|YP_007489202.1| - 0.0012 19.3 0.1 0.019 15.5 0.0 2.1 1 1 0 1 1 1 1 CS domain PIH1 PF08190.7 gi|452209088|ref|YP_007489202.1| - 0.028 13.8 0.1 0.03 13.7 0.1 1.1 1 0 0 1 1 1 0 pre-RNA processing PIH1/Nop17 Dynamin_N PF00350.18 gi|452209088|ref|YP_007489202.1| - 0.096 12.5 0.2 0.28 10.9 0.1 1.6 1 1 1 2 2 2 0 Dynamin family AMMECR1 PF01871.12 gi|452209089|ref|YP_007489203.1| - 1.6e-54 183.6 0.0 1.9e-54 183.3 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PGK PF00162.14 gi|452209090|ref|YP_007489204.1| - 5.4e-121 403.7 1.8 6.2e-121 403.5 1.2 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase HSP20 PF00011.16 gi|452209091|ref|YP_007489205.1| - 5.4e-06 26.2 0.9 4e-05 23.4 0.6 1.9 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452209091|ref|YP_007489205.1| - 0.0021 18.5 0.2 0.0075 16.7 0.0 1.8 1 1 1 2 2 2 1 CS domain Fer4 PF00037.22 gi|452209092|ref|YP_007489206.1| - 7e-12 44.4 14.7 4.2e-07 29.3 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452209092|ref|YP_007489206.1| - 5.7e-11 41.7 13.4 2.1e-05 24.1 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209092|ref|YP_007489206.1| - 7.8e-10 38.4 8.7 1.1e-09 37.9 6.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209092|ref|YP_007489206.1| - 1.9e-09 36.8 10.8 0.00016 21.4 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452209092|ref|YP_007489206.1| - 2.4e-09 37.3 9.8 2.9e-09 37.0 6.8 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209092|ref|YP_007489206.1| - 2.9e-09 37.1 9.7 4e-09 36.7 6.7 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209092|ref|YP_007489206.1| - 2.5e-08 33.6 7.7 3.1e-08 33.3 5.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209092|ref|YP_007489206.1| - 4e-06 26.7 8.9 8.4e-06 25.7 6.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209092|ref|YP_007489206.1| - 4.7e-06 27.2 7.5 0.00066 20.3 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|452209092|ref|YP_007489206.1| - 6.9e-06 25.9 8.5 0.0005 20.1 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209092|ref|YP_007489206.1| - 1.3e-05 25.5 5.9 0.0025 18.2 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452209092|ref|YP_007489206.1| - 2.1e-05 24.9 11.8 0.0027 18.2 8.3 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452209092|ref|YP_007489206.1| - 0.00013 22.1 11.1 0.0041 17.4 2.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209092|ref|YP_007489206.1| - 0.00077 19.8 14.2 0.0083 16.6 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452209092|ref|YP_007489206.1| - 0.0012 18.7 4.4 0.0032 17.3 3.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452209092|ref|YP_007489206.1| - 0.0015 18.8 13.8 0.02 15.2 9.6 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain Rep_fac-A_C PF08646.5 gi|452209092|ref|YP_007489206.1| - 0.53 9.9 2.8 0.59 9.8 1.9 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain Fer4_19 PF06902.6 gi|452209092|ref|YP_007489206.1| - 1.4 8.8 5.4 2.8 7.8 3.8 1.6 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Toxin_2 PF00451.14 gi|452209092|ref|YP_007489206.1| - 2.9 8.0 9.0 1.3 9.1 0.2 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Fer4 PF00037.22 gi|452209093|ref|YP_007489207.1| - 5.3e-13 47.9 13.3 2.6e-08 33.1 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209093|ref|YP_007489207.1| - 1.8e-11 43.6 6.6 2e-11 43.5 4.6 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209093|ref|YP_007489207.1| - 2.2e-11 43.3 8.3 3e-11 42.9 5.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209093|ref|YP_007489207.1| - 2.3e-11 43.0 13.3 1.8e-05 24.4 4.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452209093|ref|YP_007489207.1| - 3.5e-11 43.3 9.4 4.4e-11 42.9 6.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209093|ref|YP_007489207.1| - 1.3e-10 41.3 9.2 1.6e-10 41.0 6.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209093|ref|YP_007489207.1| - 9.4e-08 31.5 10.9 0.0011 18.7 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209093|ref|YP_007489207.1| - 3.7e-07 30.7 6.9 6.4e-05 23.6 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|452209093|ref|YP_007489207.1| - 1e-06 29.0 5.9 0.00035 20.9 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209093|ref|YP_007489207.1| - 1.7e-06 27.9 8.4 3.2e-06 27.0 5.9 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209093|ref|YP_007489207.1| - 1.9e-05 24.5 13.3 0.00078 19.5 3.3 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452209093|ref|YP_007489207.1| - 5.1e-05 23.5 11.3 0.00046 20.5 3.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452209093|ref|YP_007489207.1| - 0.00011 22.5 9.7 0.065 13.5 6.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452209093|ref|YP_007489207.1| - 0.00026 21.4 13.3 0.0034 17.9 9.1 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452209093|ref|YP_007489207.1| - 0.00046 20.5 13.1 0.0019 18.5 9.1 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|452209093|ref|YP_007489207.1| - 0.0032 17.3 4.6 0.011 15.6 3.2 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452209093|ref|YP_007489207.1| - 0.11 12.3 4.2 0.19 11.5 2.9 1.5 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster AFP PF02420.10 gi|452209093|ref|YP_007489207.1| - 0.63 10.3 3.1 33 5.1 0.4 2.8 2 1 0 2 2 2 0 Insect antifreeze protein repeat Toxin_2 PF00451.14 gi|452209093|ref|YP_007489207.1| - 0.67 10.0 9.4 1.3 9.2 0.3 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 HEAT_2 PF13646.1 gi|452209094|ref|YP_007489208.1| - 8.1e-125 407.4 35.7 3.6e-19 68.8 1.6 6.7 1 1 8 9 9 9 9 HEAT repeats HEAT_PBS PF03130.11 gi|452209094|ref|YP_007489208.1| - 5e-54 175.2 17.5 8.2e-05 22.7 0.1 12.3 12 0 0 12 12 12 10 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|452209094|ref|YP_007489208.1| - 1.2e-46 152.5 1.1 0.00013 21.7 0.0 11.6 12 0 0 12 12 12 7 HEAT repeat HEAT_EZ PF13513.1 gi|452209094|ref|YP_007489208.1| - 8.3e-41 137.5 19.2 6.6e-06 26.4 0.0 11.3 7 4 4 11 11 11 7 HEAT-like repeat Arm PF00514.18 gi|452209094|ref|YP_007489208.1| - 2.2e-22 78.0 0.5 0.00045 19.9 0.0 9.5 8 3 4 12 12 12 5 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|452209094|ref|YP_007489208.1| - 1.1e-10 40.5 0.0 3.2e-05 22.4 0.0 2.8 2 1 0 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.2 gi|452209094|ref|YP_007489208.1| - 5.7e-06 26.2 0.0 0.98 9.2 0.0 5.7 2 2 2 5 5 5 2 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.3 gi|452209094|ref|YP_007489208.1| - 0.00025 20.4 0.0 6.2 6.1 0.0 4.1 4 1 0 4 4 4 2 CLASP N terminal Aconitase_B_N PF11791.3 gi|452209094|ref|YP_007489208.1| - 0.00027 20.8 0.1 19 5.0 0.0 5.6 3 2 2 6 6 6 0 Aconitate B N-terminal domain ALF PF03752.8 gi|452209094|ref|YP_007489208.1| - 0.00032 20.5 9.4 0.63 9.9 0.0 6.7 9 0 0 9 9 8 2 Short repeats of unknown function UPF0147 PF03685.8 gi|452209094|ref|YP_007489208.1| - 0.0043 16.8 0.5 0.44 10.4 0.0 4.2 5 0 0 5 5 5 1 Uncharacterised protein family (UPF0147) Vitellogenin_N PF01347.17 gi|452209094|ref|YP_007489208.1| - 0.096 10.8 0.0 4.5 5.3 0.0 2.9 4 0 0 4 4 4 0 Lipoprotein amino terminal region ERAP1_C PF11838.3 gi|452209094|ref|YP_007489208.1| - 0.12 11.5 0.1 28 3.8 0.0 3.9 1 1 2 3 3 3 0 ERAP1-like C-terminal domain MmoB_DmpM PF02406.12 gi|452209094|ref|YP_007489208.1| - 0.14 12.1 0.3 10 6.1 0.0 3.4 2 2 2 4 4 4 0 MmoB/DmpM family ATP-grasp_5 PF13549.1 gi|452209096|ref|YP_007489210.1| - 5.1e-82 274.3 0.3 6e-82 274.1 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|452209096|ref|YP_007489210.1| - 0.00026 20.7 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.5 gi|452209096|ref|YP_007489210.1| - 0.0005 19.5 0.4 0.0015 17.9 0.3 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|452209096|ref|YP_007489210.1| - 0.0087 15.3 0.1 0.015 14.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.6 gi|452209096|ref|YP_007489210.1| - 0.022 14.2 0.1 0.053 12.9 0.0 1.6 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Acetate_kinase PF00871.12 gi|452209097|ref|YP_007489211.1| - 2.3e-175 582.7 0.9 2.6e-175 582.5 0.6 1.0 1 0 0 1 1 1 1 Acetokinase family PTA_PTB PF01515.14 gi|452209098|ref|YP_007489212.1| - 2.3e-127 424.4 4.9 2.6e-127 424.2 3.4 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF3663 PF12404.3 gi|452209098|ref|YP_007489212.1| - 0.017 14.9 0.2 0.058 13.1 0.0 1.9 2 0 0 2 2 2 0 Peptidase FMN_red PF03358.10 gi|452209099|ref|YP_007489213.1| - 6.5e-37 126.3 0.0 8.1e-37 126.0 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452209099|ref|YP_007489213.1| - 1e-13 51.2 0.0 1.3e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452209099|ref|YP_007489213.1| - 0.015 15.2 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|452209099|ref|YP_007489213.1| - 0.025 14.5 0.0 0.049 13.6 0.0 1.5 1 1 0 2 2 2 0 Flavodoxin Voltage_CLC PF00654.15 gi|452209100|ref|YP_007489214.1| - 9.3e-84 281.4 40.4 2.9e-83 279.8 25.0 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.23 gi|452209100|ref|YP_007489214.1| - 6.4e-22 77.0 0.7 1.6e-10 40.5 0.1 2.5 2 0 0 2 2 2 2 CBS domain AHSA1 PF08327.6 gi|452209102|ref|YP_007489216.1| - 2.6e-25 88.8 0.0 3.3e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.4 gi|452209102|ref|YP_007489216.1| - 0.0095 16.1 0.0 0.017 15.2 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport 3-dmu-9_3-mt PF06983.8 gi|452209103|ref|YP_007489217.1| - 5.3e-50 168.6 0.1 6.9e-50 168.2 0.1 1.1 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Ribonuc_L-PSP PF01042.16 gi|452209104|ref|YP_007489218.1| - 1.7e-18 66.5 0.1 2.2e-18 66.1 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Abi PF02517.11 gi|452209107|ref|YP_007489221.1| - 1.2e-09 38.1 9.1 1.2e-09 38.1 6.3 2.1 3 0 0 3 3 3 1 CAAX protease self-immunity DUF4260 PF14079.1 gi|452209107|ref|YP_007489221.1| - 0.11 12.3 5.2 0.15 11.9 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4260) DUF2953 PF11167.3 gi|452209107|ref|YP_007489221.1| - 0.71 9.8 4.5 0.69 9.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) Tmemb_14 PF03647.8 gi|452209107|ref|YP_007489221.1| - 2.5 8.5 6.6 0.59 10.5 0.5 2.7 3 1 0 3 3 3 0 Transmembrane proteins 14C URO-D PF01208.12 gi|452209109|ref|YP_007489223.1| - 5.8e-79 265.4 0.0 6.5e-79 265.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Cupin_2 PF07883.6 gi|452209110|ref|YP_007489224.1| - 2e-15 56.0 0.0 3.1e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|452209110|ref|YP_007489224.1| - 8.8e-07 28.6 0.0 1.2e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.17 gi|452209110|ref|YP_007489224.1| - 1.3e-06 27.8 0.0 1.6e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Cupin MannoseP_isomer PF01050.13 gi|452209110|ref|YP_007489224.1| - 1.6e-05 24.5 0.0 2e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.7 gi|452209110|ref|YP_007489224.1| - 0.00034 20.5 0.1 0.00044 20.1 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.7 gi|452209110|ref|YP_007489224.1| - 0.00042 19.6 0.0 0.00057 19.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) GPI PF06560.6 gi|452209110|ref|YP_007489224.1| - 0.00059 18.9 0.0 0.00086 18.3 0.0 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Auxin_BP PF02041.11 gi|452209110|ref|YP_007489224.1| - 0.004 16.6 0.0 0.0084 15.5 0.0 1.5 1 1 0 1 1 1 1 Auxin binding protein DUF2335 PF10097.4 gi|452209110|ref|YP_007489224.1| - 0.12 12.0 0.2 0.27 10.8 0.0 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2335) Cupin_6 PF12852.2 gi|452209110|ref|YP_007489224.1| - 0.14 11.7 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Cupin DUF3348 PF11828.3 gi|452209111|ref|YP_007489225.1| - 0.19 11.0 0.1 0.27 10.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3348) PHP_C PF13263.1 gi|452209112|ref|YP_007489226.1| - 4.1e-23 80.6 0.1 1.4e-22 78.9 0.1 1.9 2 0 0 2 2 2 1 PHP-associated PHP PF02811.14 gi|452209112|ref|YP_007489226.1| - 3.7e-14 52.9 0.0 2e-13 50.5 0.0 1.9 1 1 0 1 1 1 1 PHP domain MMR_HSR1 PF01926.18 gi|452209113|ref|YP_007489227.1| - 8.6e-21 74.0 0.0 1.7e-20 73.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 gi|452209113|ref|YP_007489227.1| - 5.8e-10 38.9 0.1 1.4e-07 31.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.13 gi|452209113|ref|YP_007489227.1| - 5.6e-08 32.2 0.5 2.6e-07 30.0 0.3 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.14 gi|452209113|ref|YP_007489227.1| - 0.00046 19.6 0.6 0.065 12.6 0.0 2.8 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.4 gi|452209113|ref|YP_007489227.1| - 0.0013 18.2 0.1 0.31 10.5 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.18 gi|452209113|ref|YP_007489227.1| - 0.0016 18.2 0.1 0.0079 16.0 0.0 2.0 1 1 1 2 2 2 1 Dynamin family GTP-bdg_N PF13167.1 gi|452209113|ref|YP_007489227.1| - 0.0054 16.8 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal Arf PF00025.16 gi|452209113|ref|YP_007489227.1| - 0.0075 15.5 0.1 0.024 13.8 0.1 1.9 1 1 0 1 1 1 1 ADP-ribosylation factor family AAA_29 PF13555.1 gi|452209113|ref|YP_007489227.1| - 0.018 14.5 0.0 0.04 13.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|452209113|ref|YP_007489227.1| - 0.021 14.0 0.0 0.14 11.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|452209113|ref|YP_007489227.1| - 0.021 15.1 2.8 0.17 12.1 0.1 2.4 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|452209113|ref|YP_007489227.1| - 0.022 14.4 0.0 0.046 13.4 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.22 gi|452209113|ref|YP_007489227.1| - 0.025 14.8 0.0 0.076 13.3 0.0 2.1 1 1 1 2 2 2 0 ABC transporter Miro PF08477.8 gi|452209113|ref|YP_007489227.1| - 0.063 13.7 0.0 0.19 12.2 0.0 1.9 1 1 0 1 1 1 0 Miro-like protein T2SE PF00437.15 gi|452209113|ref|YP_007489227.1| - 0.097 11.5 0.0 0.16 10.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ATP_bind_1 PF03029.12 gi|452209113|ref|YP_007489227.1| - 0.12 11.9 0.1 0.69 9.4 0.0 2.1 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein Fzo_mitofusin PF04799.8 gi|452209113|ref|YP_007489227.1| - 0.15 11.4 0.1 3.4 7.0 0.0 2.2 1 1 1 2 2 2 0 fzo-like conserved region NOG1 PF06858.9 gi|452209113|ref|YP_007489227.1| - 0.15 11.9 0.3 1.3 9.0 0.0 2.4 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) DUF2209 PF09974.4 gi|452209114|ref|YP_007489228.1| - 1.8e-60 202.6 0.1 2.1e-60 202.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) Methyltransf_7 PF03492.10 gi|452209114|ref|YP_007489228.1| - 0.07 11.8 0.0 0.083 11.6 0.0 1.1 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase Fer4_NifH PF00142.13 gi|452209115|ref|YP_007489229.1| - 4.9e-88 294.8 1.2 5.8e-88 294.6 0.8 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|452209115|ref|YP_007489229.1| - 6.5e-11 42.0 0.0 9.4e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|452209115|ref|YP_007489229.1| - 4.5e-09 35.7 0.7 5.8e-08 32.1 0.3 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|452209115|ref|YP_007489229.1| - 1.3e-06 28.4 0.0 2.8e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|452209115|ref|YP_007489229.1| - 7.5e-05 21.6 0.1 0.00012 20.9 0.1 1.2 1 0 0 1 1 1 1 ArgK protein MipZ PF09140.6 gi|452209115|ref|YP_007489229.1| - 0.00011 21.3 0.1 0.0042 16.1 0.0 2.2 2 0 0 2 2 2 1 ATPase MipZ SRP54 PF00448.17 gi|452209115|ref|YP_007489229.1| - 0.00075 18.9 0.1 0.0013 18.2 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|452209115|ref|YP_007489229.1| - 0.0012 18.4 0.0 0.002 17.6 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain AAA_16 PF13191.1 gi|452209115|ref|YP_007489229.1| - 0.0027 17.6 0.1 0.039 13.9 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.1 gi|452209115|ref|YP_007489229.1| - 0.0044 16.4 0.1 0.0083 15.5 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|452209115|ref|YP_007489229.1| - 0.0047 16.5 0.1 0.055 13.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452209115|ref|YP_007489229.1| - 0.0098 16.0 0.1 0.023 14.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|452209115|ref|YP_007489229.1| - 0.018 13.9 0.2 0.032 13.0 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|452209115|ref|YP_007489229.1| - 0.022 14.3 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|452209115|ref|YP_007489229.1| - 0.026 14.0 0.3 0.33 10.4 0.2 2.3 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein MobB PF03205.9 gi|452209115|ref|YP_007489229.1| - 0.03 14.0 0.1 0.056 13.1 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.1 gi|452209115|ref|YP_007489229.1| - 0.034 13.9 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain RNA_helicase PF00910.17 gi|452209115|ref|YP_007489229.1| - 0.13 12.4 0.0 0.3 11.2 0.0 1.7 2 0 0 2 2 2 0 RNA helicase Oxidored_nitro PF00148.14 gi|452209116|ref|YP_007489230.1| - 7.9e-18 64.2 0.0 9.7e-18 63.9 0.0 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GvpG PF05120.7 gi|452209116|ref|YP_007489230.1| - 0.011 15.4 0.1 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 Gas vesicle protein G CbiX PF01903.12 gi|452209119|ref|YP_007489233.1| - 8.5e-30 102.9 0.0 9.7e-30 102.7 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.6 gi|452209119|ref|YP_007489233.1| - 1.1e-07 31.2 0.0 1.3e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|452209119|ref|YP_007489233.1| - 0.019 13.9 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase Tocopherol_cycl PF14249.1 gi|452209120|ref|YP_007489234.1| - 3.8e-25 88.3 0.1 4.5e-21 74.9 0.0 2.1 2 0 0 2 2 2 2 Tocopherol cyclase DUF624 PF04854.9 gi|452209122|ref|YP_007489236.1| - 0.13 12.1 0.1 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF624 DUF2892 PF11127.3 gi|452209123|ref|YP_007489237.1| - 1.1e-05 25.1 0.0 1.6e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Cas_Csd1 PF09709.5 gi|452209123|ref|YP_007489237.1| - 0.0028 16.0 0.0 0.0036 15.6 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csd1) Wzy_C PF04932.10 gi|452209124|ref|YP_007489238.1| - 0.057 13.2 0.0 0.076 12.8 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase Transglut_core PF01841.14 gi|452209125|ref|YP_007489239.1| - 1.7e-09 37.9 0.1 5.4e-09 36.2 0.0 1.7 1 1 1 2 2 2 1 Transglutaminase-like superfamily DUF553 PF04473.7 gi|452209125|ref|YP_007489239.1| - 0.0031 16.8 0.1 0.006 15.8 0.0 1.4 1 1 0 1 1 1 1 Transglutaminase-like domain Peptidase_C71 PF12386.3 gi|452209125|ref|YP_007489239.1| - 0.013 14.8 0.9 0.02 14.3 0.6 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Peptidase_C93 PF06035.6 gi|452209125|ref|YP_007489239.1| - 0.077 12.4 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP Abhydrolase_6 PF12697.2 gi|452209128|ref|YP_007489242.1| - 3.7e-33 115.3 0.0 4.2e-33 115.1 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|452209128|ref|YP_007489242.1| - 1.1e-17 64.3 0.0 9.2e-17 61.3 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|452209128|ref|YP_007489242.1| - 5.9e-14 52.0 0.0 1.9e-13 50.4 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|452209128|ref|YP_007489242.1| - 8.6e-05 22.3 0.0 0.00015 21.5 0.0 1.3 1 0 0 1 1 1 1 Putative lysophospholipase Ndr PF03096.9 gi|452209128|ref|YP_007489242.1| - 0.037 12.5 0.0 0.16 10.3 0.0 1.9 1 1 0 1 1 1 0 Ndr family Esterase PF00756.15 gi|452209128|ref|YP_007489242.1| - 0.077 12.4 0.0 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 Putative esterase AA_permease PF00324.16 gi|452209129|ref|YP_007489243.1| - 2.9e-43 147.9 42.2 4e-43 147.4 29.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|452209129|ref|YP_007489243.1| - 7.7e-42 143.3 47.4 1e-41 142.8 32.9 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.21 gi|452209129|ref|YP_007489243.1| - 2e-27 96.0 0.0 2e-12 47.4 0.0 2.4 2 0 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.8 gi|452209129|ref|YP_007489243.1| - 5e-12 45.1 16.4 5e-12 45.1 11.4 1.9 2 0 0 2 2 2 1 Spore germination protein DcpS PF05652.7 gi|452209131|ref|YP_007489245.1| - 0.057 13.8 0.2 0.08 13.3 0.1 1.3 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme (DcpS) N-terminal DUF573 PF04504.9 gi|452209131|ref|YP_007489245.1| - 0.074 13.3 0.3 0.074 13.3 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function, DUF573 Acyl_transf_3 PF01757.17 gi|452209135|ref|YP_007489249.1| - 2.3e-28 99.0 46.6 1.4e-27 96.4 32.3 1.9 1 1 0 1 1 1 1 Acyltransferase family CxxCxxCC PF03692.10 gi|452209136|ref|YP_007489250.1| - 0.078 13.4 0.1 0.098 13.1 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain NosD PF05048.8 gi|452209137|ref|YP_007489251.1| - 5.6e-13 48.5 16.5 7.7e-13 48.1 11.4 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452209137|ref|YP_007489251.1| - 4.3e-10 39.5 19.5 4.3e-10 39.5 13.5 1.5 1 1 1 2 2 2 2 Right handed beta helix region DUF1565 PF07602.6 gi|452209137|ref|YP_007489251.1| - 2.4e-05 23.6 16.4 0.013 14.6 0.1 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1565) Cupin_2 PF07883.6 gi|452209138|ref|YP_007489252.1| - 5.7e-18 64.1 0.1 7.7e-18 63.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|452209138|ref|YP_007489252.1| - 0.00019 21.1 0.0 0.00026 20.7 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|452209138|ref|YP_007489252.1| - 0.00022 20.8 0.0 0.00028 20.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|452209138|ref|YP_007489252.1| - 0.00036 20.4 0.0 0.00045 20.1 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_1 PF00190.17 gi|452209138|ref|YP_007489252.1| - 0.0033 16.8 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|452209138|ref|YP_007489252.1| - 0.028 13.7 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cupin_6 PF12852.2 gi|452209138|ref|YP_007489252.1| - 0.12 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Cupin DUF3763 PF12592.3 gi|452209139|ref|YP_007489253.1| - 0.12 12.0 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3763) Metallophos PF00149.23 gi|452209140|ref|YP_007489254.1| - 1.1e-13 51.0 2.0 2.5e-13 49.8 1.4 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452209140|ref|YP_007489254.1| - 1.5e-11 44.4 0.0 2.1e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Glyco_tran_WecB PF03808.8 gi|452209140|ref|YP_007489254.1| - 0.14 11.5 0.0 0.36 10.2 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family U79_P34 PF03064.11 gi|452209141|ref|YP_007489255.1| - 1.9 7.9 8.9 2.1 7.8 6.1 1.0 1 0 0 1 1 1 0 HSV U79 / HCMV P34 DUF1510 PF07423.6 gi|452209142|ref|YP_007489256.1| - 1.1 8.5 3.6 1.6 8.0 0.7 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1510) RNB PF00773.14 gi|452209144|ref|YP_007489258.1| - 5.2e-65 219.8 0.0 7.9e-65 219.2 0.0 1.2 1 0 0 1 1 1 1 RNB domain dsrm PF00035.20 gi|452209144|ref|YP_007489258.1| - 4.4e-14 52.7 0.1 1.3e-10 41.7 0.1 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif DND1_DSRM PF14709.1 gi|452209144|ref|YP_007489258.1| - 0.0001 22.5 0.3 0.011 16.0 0.2 2.8 2 1 0 2 2 2 1 double strand RNA binding domain from DEAD END PROTEIN 1 Plasmid_stabil PF05016.9 gi|452209145|ref|YP_007489259.1| - 0.00088 19.6 0.0 0.0012 19.2 0.0 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF4358 PF14270.1 gi|452209145|ref|YP_007489259.1| - 0.0054 16.5 0.5 0.0066 16.3 0.1 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4358) PPV_E2_C PF00511.12 gi|452209147|ref|YP_007489261.1| - 0.041 13.8 0.1 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 E2 (early) protein, C terminal DUF456 PF04306.8 gi|452209148|ref|YP_007489262.1| - 0.01 15.8 6.0 0.018 15.0 4.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) DUF2453 PF10507.4 gi|452209148|ref|YP_007489262.1| - 0.027 14.2 0.1 0.039 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2453) Fic PF02661.13 gi|452209149|ref|YP_007489263.1| - 2.4e-09 37.7 0.2 4.5e-09 36.8 0.1 1.5 1 0 0 1 1 1 1 Fic/DOC family HTH_32 PF13565.1 gi|452209149|ref|YP_007489263.1| - 0.0077 17.0 0.0 0.0093 16.7 0.0 1.2 1 0 0 1 1 1 1 Homeodomain-like domain Peptidase_M16 PF00675.15 gi|452209149|ref|YP_007489263.1| - 0.065 12.9 0.0 0.087 12.5 0.0 1.1 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) Cas_Cas4 PF01930.12 gi|452209154|ref|YP_007489268.1| - 4.2e-18 65.7 7.5 5.3e-18 65.4 5.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|452209154|ref|YP_007489268.1| - 6e-11 42.2 1.9 6e-11 42.2 1.3 1.7 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily Phage_NinH PF06322.6 gi|452209154|ref|YP_007489268.1| - 0.041 13.4 0.3 0.17 11.5 0.0 2.1 3 0 0 3 3 3 0 Phage NinH protein CRISPR_Cas2 PF09827.4 gi|452209155|ref|YP_007489269.1| - 1e-22 80.0 0.5 1.2e-22 79.7 0.4 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas2CT1978 PF09707.5 gi|452209155|ref|YP_007489269.1| - 0.047 13.6 0.0 0.065 13.1 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Cas_Cas1 PF01867.11 gi|452209156|ref|YP_007489270.1| - 6.5e-73 245.2 0.0 7.6e-73 245.0 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 DEAD PF00270.24 gi|452209157|ref|YP_007489271.1| - 0.0003 20.3 0.0 0.0003 20.3 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|452209157|ref|YP_007489271.1| - 0.00039 20.3 0.0 0.00041 20.2 0.0 1.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.11 gi|452209157|ref|YP_007489271.1| - 0.0054 15.9 0.0 0.0057 15.9 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein DUF694 PF05107.7 gi|452209159|ref|YP_007489273.1| - 7.8e-17 61.3 0.1 8.1e-17 61.3 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF694) Cas_TM1802 PF09484.5 gi|452209161|ref|YP_007489275.1| - 0.0099 14.4 0.0 0.0099 14.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) HTH_24 PF13412.1 gi|452209162|ref|YP_007489276.1| - 2.1e-07 30.2 0.1 3.9e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.1 gi|452209162|ref|YP_007489276.1| - 5.2e-07 29.3 0.1 1.1e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix Cas_APE2256 PF09651.5 gi|452209162|ref|YP_007489276.1| - 1.9e-05 24.3 0.1 3.9e-05 23.3 0.0 1.6 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) DUF1887 PF09002.6 gi|452209162|ref|YP_007489276.1| - 2.1e-05 23.1 0.2 2.6e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) HTH_5 PF01022.15 gi|452209162|ref|YP_007489276.1| - 4.1e-05 23.1 0.1 9.1e-05 22.0 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|452209162|ref|YP_007489276.1| - 0.00011 21.8 0.1 0.0004 20.0 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Cas_Cas02710 PF09670.5 gi|452209162|ref|YP_007489276.1| - 0.0006 18.5 0.1 0.0008 18.1 0.1 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) HTH_20 PF12840.2 gi|452209162|ref|YP_007489276.1| - 0.0021 17.7 0.0 0.0039 16.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain RNase_HII PF01351.13 gi|452209162|ref|YP_007489276.1| - 0.0089 15.6 0.9 0.041 13.5 0.1 1.9 2 0 0 2 2 2 1 Ribonuclease HII HTH_27 PF13463.1 gi|452209162|ref|YP_007489276.1| - 0.014 15.6 0.1 0.061 13.6 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|452209162|ref|YP_007489276.1| - 0.021 14.4 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain QRPTase_C PF01729.14 gi|452209162|ref|YP_007489276.1| - 0.025 14.0 0.3 0.16 11.4 0.1 2.0 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain HTH_28 PF13518.1 gi|452209162|ref|YP_007489276.1| - 0.032 14.2 0.0 0.062 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209162|ref|YP_007489276.1| - 0.037 13.6 0.1 0.092 12.4 0.0 1.6 1 0 0 1 1 1 0 HTH domain AAA_14 PF13173.1 gi|452209162|ref|YP_007489276.1| - 0.041 13.7 0.2 0.71 9.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain MarR PF01047.17 gi|452209162|ref|YP_007489276.1| - 0.056 13.1 0.3 0.16 11.7 0.1 1.8 2 0 0 2 2 2 0 MarR family HTH_36 PF13730.1 gi|452209162|ref|YP_007489276.1| - 0.057 13.5 0.5 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain ATP-synt_F PF01990.12 gi|452209162|ref|YP_007489276.1| - 0.073 13.4 1.7 0.41 11.0 0.4 2.2 1 1 1 2 2 2 0 ATP synthase (F/14-kDa) subunit TetR_N PF00440.18 gi|452209162|ref|YP_007489276.1| - 0.13 11.9 0.1 0.27 10.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family ABC_tran PF00005.22 gi|452209165|ref|YP_007489279.1| - 1.6e-26 93.2 0.0 2.5e-26 92.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209165|ref|YP_007489279.1| - 7.6e-12 45.7 0.9 4.7e-05 23.5 0.2 2.2 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|452209165|ref|YP_007489279.1| - 4.4e-06 26.8 0.2 2.5e-05 24.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|452209165|ref|YP_007489279.1| - 1.1e-05 24.9 0.1 0.0099 15.3 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain SMC_N PF02463.14 gi|452209165|ref|YP_007489279.1| - 8.7e-05 21.8 0.4 0.0011 18.2 0.1 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452209165|ref|YP_007489279.1| - 0.00011 21.3 0.0 0.094 11.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_16 PF13191.1 gi|452209165|ref|YP_007489279.1| - 0.00019 21.4 0.3 0.0028 17.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|452209165|ref|YP_007489279.1| - 0.00026 20.4 0.9 0.00049 19.5 0.2 1.8 2 0 0 2 2 1 1 P-loop containing region of AAA domain DUF815 PF05673.8 gi|452209165|ref|YP_007489279.1| - 0.00035 19.5 0.0 0.00065 18.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF258 PF03193.11 gi|452209165|ref|YP_007489279.1| - 0.0008 18.6 0.0 0.0011 18.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 FtsK_SpoIIIE PF01580.13 gi|452209165|ref|YP_007489279.1| - 0.0012 18.3 0.4 0.0024 17.3 0.0 1.6 2 0 0 2 2 1 1 FtsK/SpoIIIE family MMR_HSR1 PF01926.18 gi|452209165|ref|YP_007489279.1| - 0.0017 18.3 0.0 0.0033 17.3 0.0 1.6 2 0 0 2 2 1 1 50S ribosome-binding GTPase AAA_23 PF13476.1 gi|452209165|ref|YP_007489279.1| - 0.0022 18.3 0.1 0.0042 17.4 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452209165|ref|YP_007489279.1| - 0.0038 18.0 0.5 0.0068 17.2 0.3 1.7 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.12 gi|452209165|ref|YP_007489279.1| - 0.0039 17.0 0.2 0.0094 15.7 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF87 Miro PF08477.8 gi|452209165|ref|YP_007489279.1| - 0.0039 17.6 0.0 0.0082 16.6 0.0 1.6 1 0 0 1 1 1 1 Miro-like protein AAA_24 PF13479.1 gi|452209165|ref|YP_007489279.1| - 0.0056 16.2 0.1 0.088 12.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|452209165|ref|YP_007489279.1| - 0.011 15.6 0.0 0.13 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|452209165|ref|YP_007489279.1| - 0.015 14.9 0.2 3.7 7.2 0.0 2.3 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.1 gi|452209165|ref|YP_007489279.1| - 0.019 14.8 0.1 0.13 12.1 0.1 2.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|452209165|ref|YP_007489279.1| - 0.019 14.6 0.0 0.044 13.4 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Arch_ATPase PF01637.13 gi|452209165|ref|YP_007489279.1| - 0.02 14.5 0.2 0.15 11.7 0.0 2.0 2 0 0 2 2 2 0 Archaeal ATPase ATP-synt_ab PF00006.20 gi|452209165|ref|YP_007489279.1| - 0.024 14.1 0.0 0.047 13.1 0.0 1.6 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_28 PF13521.1 gi|452209165|ref|YP_007489279.1| - 0.033 14.1 0.1 0.081 12.8 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_13 PF13166.1 gi|452209165|ref|YP_007489279.1| - 0.052 12.0 0.0 4.6 5.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain KAP_NTPase PF07693.9 gi|452209165|ref|YP_007489279.1| - 0.056 12.4 0.0 0.18 10.7 0.0 1.5 1 1 1 2 2 2 0 KAP family P-loop domain AAA_18 PF13238.1 gi|452209165|ref|YP_007489279.1| - 0.062 13.6 0.1 0.34 11.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Guanylate_kin PF00625.16 gi|452209165|ref|YP_007489279.1| - 0.096 12.1 0.1 1 8.7 0.0 2.2 2 0 0 2 2 2 0 Guanylate kinase AAA_30 PF13604.1 gi|452209165|ref|YP_007489279.1| - 0.1 12.1 0.1 0.95 8.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.10 gi|452209165|ref|YP_007489279.1| - 0.1 11.2 0.0 0.2 10.2 0.0 1.4 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein IstB_IS21 PF01695.12 gi|452209165|ref|YP_007489279.1| - 0.1 11.9 0.1 0.99 8.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|452209165|ref|YP_007489279.1| - 0.11 11.7 0.1 0.28 10.2 0.1 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ArgK PF03308.11 gi|452209165|ref|YP_007489279.1| - 0.11 11.2 0.1 0.17 10.6 0.1 1.2 1 0 0 1 1 1 0 ArgK protein DUF1638 PF07796.6 gi|452209166|ref|YP_007489280.1| - 3.6e-41 140.5 0.0 4.7e-41 140.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.6 gi|452209167|ref|YP_007489281.1| - 1.4e-42 145.1 0.3 2.9e-42 144.1 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) Imm17 PF15591.1 gi|452209167|ref|YP_007489281.1| - 0.019 14.7 0.6 0.047 13.4 0.1 1.9 2 0 0 2 2 2 0 Immunity protein 17 Spore_YhcN_YlaJ PF09580.5 gi|452209167|ref|YP_007489281.1| - 0.17 11.9 0.0 0.68 10.0 0.0 1.8 2 0 0 2 2 2 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GalP_UDP_transf PF01087.17 gi|452209168|ref|YP_007489282.1| - 1.3e-12 48.1 0.0 1.2e-11 45.0 0.0 2.4 2 1 0 2 2 2 1 Galactose-1-phosphate uridyl transferase, N-terminal domain Cas_CXXC_CXXC PF09706.5 gi|452209168|ref|YP_007489282.1| - 0.018 15.2 3.7 0.2 11.8 0.0 3.1 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_CXXC_CXXC) HIT PF01230.18 gi|452209168|ref|YP_007489282.1| - 0.021 15.3 0.0 1.2 9.7 0.0 2.2 2 0 0 2 2 2 0 HIT domain GalP_UDP_tr_C PF02744.12 gi|452209168|ref|YP_007489282.1| - 0.098 12.1 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain Glycos_transf_1 PF00534.15 gi|452209169|ref|YP_007489283.1| - 3e-32 111.4 0.0 6.7e-32 110.2 0.0 1.5 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452209169|ref|YP_007489283.1| - 9.7e-19 68.0 0.0 1.7e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|452209169|ref|YP_007489283.1| - 4.9e-15 55.8 0.0 1e-14 54.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209169|ref|YP_007489283.1| - 2.1e-10 40.5 0.1 2.5e-09 37.1 0.1 2.2 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.6 gi|452209169|ref|YP_007489283.1| - 2.2e-08 33.9 0.1 1.2e-06 28.2 0.0 2.2 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_4_2 PF13477.1 gi|452209169|ref|YP_007489283.1| - 2.2e-07 30.8 0.0 4.3e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|452209169|ref|YP_007489283.1| - 0.0014 18.8 0.0 0.0031 17.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2150 PF09920.4 gi|452209170|ref|YP_007489284.1| - 6.8e-74 247.5 5.1 8.1e-74 247.3 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) UPF0179 PF03684.8 gi|452209171|ref|YP_007489285.1| - 9.5e-54 180.8 3.4 1.1e-53 180.6 2.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) Fe-ADH_2 PF13685.1 gi|452209172|ref|YP_007489286.1| - 1.1e-74 250.8 1.3 1.4e-74 250.5 0.9 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|452209172|ref|YP_007489286.1| - 5.7e-28 97.5 5.2 1.4e-27 96.2 3.6 1.5 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|452209172|ref|YP_007489286.1| - 2.5e-10 39.7 0.2 1.4e-09 37.3 0.2 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.15 gi|452209172|ref|YP_007489286.1| - 0.0035 16.6 0.3 0.0099 15.1 0.2 1.8 1 1 0 1 1 1 1 AIR carboxylase Ribosomal_S11 PF00411.14 gi|452209172|ref|YP_007489286.1| - 0.038 14.1 0.0 0.1 12.8 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein S11 DUF63 PF01889.12 gi|452209173|ref|YP_007489287.1| - 3.2e-105 352.0 12.0 3.6e-105 351.9 8.3 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 DUF2627 PF11118.3 gi|452209173|ref|YP_007489287.1| - 0.047 13.7 1.5 0.092 12.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF95 PF01944.12 gi|452209174|ref|YP_007489288.1| - 6.7e-34 116.9 20.3 8.4e-34 116.6 14.1 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 DUF1297 PF06973.7 gi|452209176|ref|YP_007489290.1| - 5.6e-79 263.8 0.0 7.4e-79 263.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|452209176|ref|YP_007489290.1| - 1.2e-44 151.0 0.0 2e-44 150.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|452209176|ref|YP_007489290.1| - 0.0064 16.2 0.0 2.2 7.9 0.0 2.4 1 1 0 2 2 2 2 ATP-grasp domain GTP_EFTU PF00009.22 gi|452209177|ref|YP_007489291.1| - 1.9e-44 151.3 0.2 2.9e-44 150.7 0.2 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|452209177|ref|YP_007489291.1| - 5.3e-29 100.1 0.8 1.2e-28 98.9 0.6 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|452209177|ref|YP_007489291.1| - 2.2e-07 30.8 0.3 6.5e-07 29.3 0.2 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 PolC_DP2 PF03833.8 gi|452209177|ref|YP_007489291.1| - 0.0005 17.8 0.4 0.0007 17.4 0.3 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 MMR_HSR1 PF01926.18 gi|452209177|ref|YP_007489291.1| - 0.001 19.0 0.0 0.0034 17.3 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase PduV-EutP PF10662.4 gi|452209177|ref|YP_007489291.1| - 0.0024 17.3 3.4 1.3 8.5 0.0 3.0 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.13 gi|452209177|ref|YP_007489291.1| - 0.0053 16.0 1.5 0.79 8.9 0.4 2.9 2 1 0 2 2 2 1 Ferrous iron transport protein B Nop10p PF04135.7 gi|452209177|ref|YP_007489291.1| - 0.0082 15.8 1.9 0.015 14.9 1.3 1.4 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family zf-ribbon_3 PF13248.1 gi|452209177|ref|YP_007489291.1| - 0.48 9.7 11.1 0.037 13.2 0.8 2.2 1 1 1 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|452209177|ref|YP_007489291.1| - 0.57 10.1 2.4 1 9.3 1.6 1.4 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.7 gi|452209177|ref|YP_007489291.1| - 8 5.8 9.3 26 4.2 6.5 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Fcf1 PF04900.7 gi|452209178|ref|YP_007489292.1| - 7.9e-07 29.1 0.0 1e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Fcf1 UPF0278 PF08745.6 gi|452209178|ref|YP_007489292.1| - 8.7e-06 25.1 0.4 0.0037 16.5 0.1 2.1 1 1 0 2 2 2 2 UPF0278 family PIN PF01850.16 gi|452209178|ref|YP_007489292.1| - 0.00035 20.9 0.2 0.05 13.9 0.1 2.1 1 1 0 1 1 1 1 PIN domain PIN_4 PF13638.1 gi|452209178|ref|YP_007489292.1| - 0.0028 17.7 0.1 0.053 13.6 0.0 2.0 1 1 1 2 2 2 1 PIN domain DUF188 PF02639.9 gi|452209178|ref|YP_007489292.1| - 0.059 12.8 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 XPG_I_2 PF12813.2 gi|452209178|ref|YP_007489292.1| - 0.086 12.3 0.1 0.36 10.2 0.1 1.8 1 1 1 2 2 2 0 XPG domain containing RNase_Zc3h12a PF11977.3 gi|452209178|ref|YP_007489292.1| - 0.12 12.1 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain SHS2_Rpb7-N PF03876.12 gi|452209179|ref|YP_007489293.1| - 1.1e-20 73.5 0.2 3.1e-20 72.0 0.0 1.8 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|452209179|ref|YP_007489293.1| - 8.9e-10 38.5 0.3 1.5e-09 37.7 0.2 1.4 1 0 0 1 1 1 1 S1 RNA binding domain Spt4 PF06093.8 gi|452209180|ref|YP_007489294.1| - 3.6e-13 49.1 0.0 4.4e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger DZR PF12773.2 gi|452209180|ref|YP_007489294.1| - 0.012 15.4 0.6 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|452209180|ref|YP_007489294.1| - 0.026 13.8 0.4 0.06 12.6 0.0 1.7 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RING_5 PF14634.1 gi|452209180|ref|YP_007489294.1| - 0.046 13.4 2.2 0.061 13.0 1.5 1.2 1 0 0 1 1 1 0 zinc-RING finger domain Rad50_zn_hook PF04423.9 gi|452209180|ref|YP_007489294.1| - 0.05 13.0 2.2 0.59 9.6 1.3 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C3HC4_3 PF13920.1 gi|452209180|ref|YP_007489294.1| - 0.081 12.6 1.9 0.12 12.1 1.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|452209180|ref|YP_007489294.1| - 0.17 11.1 4.8 0.31 10.2 0.3 2.1 1 1 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|452209180|ref|YP_007489294.1| - 0.69 9.9 5.0 1 9.3 0.2 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Prim_Zn_Ribbon PF08273.7 gi|452209180|ref|YP_007489294.1| - 1.1 9.3 6.2 0.77 9.8 0.5 2.2 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase UPF0547 PF10571.4 gi|452209180|ref|YP_007489294.1| - 1.2 8.8 4.4 3.7 7.3 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 YhfH PF14149.1 gi|452209180|ref|YP_007489294.1| - 1.8 8.4 3.9 10 5.9 0.1 2.2 1 1 1 2 2 2 0 YhfH-like protein DUF2256 PF10013.4 gi|452209180|ref|YP_007489294.1| - 2 8.2 6.4 1.8 8.3 0.4 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zinc_ribbon_2 PF13240.1 gi|452209180|ref|YP_007489294.1| - 4.1 7.0 6.1 1.1 8.7 0.4 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DUF359 PF04019.7 gi|452209181|ref|YP_007489295.1| - 1.4e-42 143.9 0.1 1.8e-42 143.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S24e PF01282.14 gi|452209182|ref|YP_007489296.1| - 6.7e-30 102.7 0.2 8.5e-30 102.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e NADPH_Ox PF08414.5 gi|452209182|ref|YP_007489296.1| - 0.065 13.3 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Respiratory burst NADPH oxidase Ribosomal_S27 PF01599.14 gi|452209183|ref|YP_007489297.1| - 2.3e-21 75.3 2.1 2.6e-21 75.1 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.1 gi|452209183|ref|YP_007489297.1| - 0.00034 20.2 3.8 0.01 15.5 3.2 2.3 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.14 gi|452209183|ref|YP_007489297.1| - 0.0011 18.7 1.2 0.0012 18.5 0.9 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.2 gi|452209183|ref|YP_007489297.1| - 0.0013 18.4 0.5 0.0017 18.1 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|452209183|ref|YP_007489297.1| - 0.0027 17.3 2.8 0.35 10.5 0.0 2.1 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit GFA PF04828.9 gi|452209183|ref|YP_007489297.1| - 0.0049 16.7 1.1 0.039 13.9 0.0 1.9 1 1 1 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme IBR PF01485.16 gi|452209183|ref|YP_007489297.1| - 0.0087 15.9 0.2 0.0092 15.8 0.1 1.1 1 0 0 1 1 1 1 IBR domain zf-NADH-PPase PF09297.6 gi|452209183|ref|YP_007489297.1| - 0.01 15.3 4.5 0.062 12.8 0.3 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|452209183|ref|YP_007489297.1| - 0.022 14.0 1.2 0.032 13.5 0.8 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|452209183|ref|YP_007489297.1| - 0.035 14.3 1.0 0.053 13.8 0.7 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.1 gi|452209183|ref|YP_007489297.1| - 0.036 13.2 4.3 0.52 9.5 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2082 PF09855.4 gi|452209183|ref|YP_007489297.1| - 0.038 13.8 2.3 0.17 11.7 0.3 2.2 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HypA PF01155.14 gi|452209183|ref|YP_007489297.1| - 0.058 13.0 0.3 0.061 13.0 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Auto_anti-p27 PF06677.7 gi|452209183|ref|YP_007489297.1| - 0.061 13.0 1.2 0.089 12.5 0.9 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1451 PF07295.6 gi|452209183|ref|YP_007489297.1| - 0.11 12.3 0.3 0.1 12.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) zinc_ribbon_2 PF13240.1 gi|452209183|ref|YP_007489297.1| - 0.12 11.9 5.2 1.8 8.1 1.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|452209183|ref|YP_007489297.1| - 0.13 11.9 0.9 0.19 11.3 0.6 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-HYPF PF07503.7 gi|452209183|ref|YP_007489297.1| - 0.22 10.9 3.4 0.64 9.4 0.2 2.2 2 0 0 2 2 2 0 HypF finger NOB1_Zn_bind PF08772.6 gi|452209183|ref|YP_007489297.1| - 0.32 10.8 6.1 0.25 11.1 0.5 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Zn_Tnp_IS1595 PF12760.2 gi|452209183|ref|YP_007489297.1| - 0.66 9.8 4.5 2 8.2 3.1 1.8 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF2072 PF09845.4 gi|452209183|ref|YP_007489297.1| - 0.69 9.8 2.8 1.1 9.2 0.0 1.9 1 1 1 2 2 2 0 Zn-ribbon containing protein (DUF2072) Zn-ribbon_8 PF09723.5 gi|452209183|ref|YP_007489297.1| - 1.1 9.2 3.6 10 6.1 0.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF1936 PF09151.5 gi|452209183|ref|YP_007489297.1| - 1.3 8.5 7.0 0.25 10.8 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1936) A2L_zn_ribbon PF08792.5 gi|452209183|ref|YP_007489297.1| - 1.4 8.5 6.5 3.4 7.2 2.1 2.6 2 1 1 3 3 3 0 A2L zinc ribbon domain UPF0547 PF10571.4 gi|452209183|ref|YP_007489297.1| - 3.3 7.4 6.0 4.1 7.1 1.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF1884 PF08967.5 gi|452209186|ref|YP_007489300.1| - 0.046 13.7 0.2 0.051 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1884) TPR_1 PF00515.23 gi|452209187|ref|YP_007489301.1| - 1.8e-90 293.1 61.8 6e-08 31.9 0.1 20.8 22 0 0 22 22 21 16 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452209187|ref|YP_007489301.1| - 2.7e-90 296.0 67.0 8e-12 44.6 0.2 14.1 7 2 10 17 17 17 15 TPR repeat TPR_2 PF07719.12 gi|452209187|ref|YP_007489301.1| - 8.5e-90 287.6 70.9 8e-08 31.6 0.2 21.8 21 1 1 22 22 22 18 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452209187|ref|YP_007489301.1| - 1.3e-70 232.8 47.4 1.1e-09 38.6 0.0 14.5 11 3 4 15 15 15 12 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452209187|ref|YP_007489301.1| - 1.3e-53 179.2 36.9 9.1e-10 38.7 0.0 13.3 11 1 2 13 13 13 10 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452209187|ref|YP_007489301.1| - 1.6e-50 164.9 44.2 0.00015 22.1 0.1 19.7 8 6 12 20 20 19 11 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452209187|ref|YP_007489301.1| - 8.2e-50 166.6 52.7 3.5e-09 36.4 0.5 14.2 5 3 9 14 14 14 13 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452209187|ref|YP_007489301.1| - 2.6e-49 161.3 39.2 0.0006 19.8 0.0 21.7 22 2 1 23 23 22 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452209187|ref|YP_007489301.1| - 6.7e-45 147.5 52.2 0.00066 19.2 0.0 20.2 21 1 1 22 22 20 10 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452209187|ref|YP_007489301.1| - 2.8e-35 117.3 41.4 0.0015 18.1 0.1 18.5 18 1 1 19 19 19 8 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452209187|ref|YP_007489301.1| - 8.8e-34 115.1 24.4 3e-05 23.7 0.0 12.7 7 3 4 13 13 13 9 Tetratricopeptide repeat Apc3 PF12895.2 gi|452209187|ref|YP_007489301.1| - 5.4e-32 109.7 36.0 2.2e-05 24.4 1.6 11.2 4 2 8 13 13 12 10 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|452209187|ref|YP_007489301.1| - 1.5e-18 65.8 52.9 0.037 14.5 0.1 17.9 21 0 0 21 21 16 3 Tetratricopeptide repeat NARP1 PF12569.3 gi|452209187|ref|YP_007489301.1| - 1.1e-14 54.1 7.4 0.0078 15.0 0.4 8.0 4 2 3 7 7 7 4 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|452209187|ref|YP_007489301.1| - 2.3e-11 43.2 14.8 0.0044 16.1 0.0 7.6 3 2 5 8 8 7 4 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452209187|ref|YP_007489301.1| - 4.3e-10 39.1 48.6 0.26 11.2 0.0 14.3 14 1 1 15 15 14 4 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452209187|ref|YP_007489301.1| - 3.3e-08 33.5 12.9 0.38 10.8 0.0 8.6 5 3 6 12 12 10 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452209187|ref|YP_007489301.1| - 4.3e-08 32.9 33.5 2.9 7.8 0.8 13.2 14 1 2 16 16 15 2 Fis1 C-terminal tetratricopeptide repeat PPTA PF01239.17 gi|452209187|ref|YP_007489301.1| - 4.5e-07 28.9 0.6 0.11 11.8 0.0 6.0 6 0 0 6 6 6 1 Protein prenyltransferase alpha subunit repeat BTAD PF03704.12 gi|452209187|ref|YP_007489301.1| - 4.3e-06 27.0 17.1 0.044 14.0 0.1 8.1 6 2 3 10 10 9 1 Bacterial transcriptional activator domain RPN7 PF10602.4 gi|452209187|ref|YP_007489301.1| - 6.1e-06 25.7 22.7 3.4 7.0 0.0 9.9 5 3 3 8 8 8 1 26S proteasome subunit RPN7 Rapsyn_N PF10579.4 gi|452209187|ref|YP_007489301.1| - 0.00016 21.3 2.4 0.61 9.9 0.0 5.9 7 0 0 7 7 6 1 Rapsyn N-terminal myristoylation and linker region DUF3856 PF12968.2 gi|452209187|ref|YP_007489301.1| - 0.0002 21.1 25.6 1.4 8.7 0.3 10.4 6 3 3 11 11 11 1 Domain of Unknown Function (DUF3856) TPR_4 PF07721.9 gi|452209187|ref|YP_007489301.1| - 0.00062 19.9 16.6 32 5.3 0.0 9.6 11 0 0 11 11 7 0 Tetratricopeptide repeat TPR_21 PF09976.4 gi|452209187|ref|YP_007489301.1| - 0.0013 18.6 20.0 0.78 9.6 0.0 7.4 9 1 0 9 9 7 2 Tetratricopeptide repeat TPR_3 PF07720.7 gi|452209187|ref|YP_007489301.1| - 0.0035 17.1 28.4 5 7.0 0.0 9.6 10 0 0 10 10 9 0 Tetratricopeptide repeat Cohesin_load PF10345.4 gi|452209187|ref|YP_007489301.1| - 0.12 10.5 0.3 0.87 7.7 0.1 2.1 1 1 1 2 2 2 0 Cohesin loading factor SHNi-TPR PF10516.4 gi|452209187|ref|YP_007489301.1| - 0.18 11.0 3.1 4.2 6.6 0.1 4.7 4 0 0 4 4 4 0 SHNi-TPR Paf67 PF10255.4 gi|452209187|ref|YP_007489301.1| - 0.51 9.1 2.0 24 3.6 0.0 3.8 5 1 0 5 5 5 0 RNA polymerase I-associated factor PAF67 MIT PF04212.13 gi|452209187|ref|YP_007489301.1| - 0.59 10.0 35.1 2.8 7.8 0.0 10.8 13 1 1 14 14 10 0 MIT (microtubule interacting and transport) domain PPR PF01535.15 gi|452209187|ref|YP_007489301.1| - 0.98 9.5 33.3 1.8 8.7 0.0 11.7 13 0 0 13 13 12 0 PPR repeat Peptidase_M22 PF00814.20 gi|452209188|ref|YP_007489302.1| - 2e-88 296.3 0.1 2.5e-88 296.0 0.1 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.17 gi|452209188|ref|YP_007489302.1| - 2.7e-08 33.4 0.0 4.9e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|452209188|ref|YP_007489302.1| - 6e-08 32.7 0.2 0.00036 20.3 0.0 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.9 gi|452209188|ref|YP_007489302.1| - 2.9e-06 26.5 0.0 9.1e-05 21.6 0.0 2.2 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.20 gi|452209188|ref|YP_007489302.1| - 1.2e-05 24.6 0.1 2.1e-05 23.8 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain B12-binding PF02310.14 gi|452209188|ref|YP_007489302.1| - 0.01 15.7 0.2 1.1 9.0 0.0 2.9 3 0 0 3 3 3 0 B12 binding domain CmcH_NodU PF02543.10 gi|452209188|ref|YP_007489302.1| - 0.017 14.2 0.0 0.024 13.7 0.0 1.2 1 0 0 1 1 1 0 Carbamoyltransferase Pkinase_Tyr PF07714.12 gi|452209188|ref|YP_007489302.1| - 0.036 13.1 0.0 0.062 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase WaaY PF06176.6 gi|452209188|ref|YP_007489302.1| - 0.049 12.8 0.0 0.082 12.1 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Ham1p_like PF01725.11 gi|452209189|ref|YP_007489303.1| - 1.3e-54 184.4 0.0 1.5e-54 184.2 0.0 1.0 1 0 0 1 1 1 1 Ham1 family TatC PF00902.13 gi|452209191|ref|YP_007489305.1| - 0.016 14.6 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) Cyclase PF04199.8 gi|452209192|ref|YP_007489306.1| - 4.2e-26 91.6 0.0 5.6e-26 91.2 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Fer4 PF00037.22 gi|452209193|ref|YP_007489307.1| - 1.6e-10 40.1 14.9 9.4e-06 25.0 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452209193|ref|YP_007489307.1| - 5.6e-09 36.1 22.7 3.6e-06 27.1 9.0 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209193|ref|YP_007489307.1| - 1.2e-08 34.6 11.0 1.6e-08 34.1 7.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209193|ref|YP_007489307.1| - 6.6e-08 32.1 15.7 0.00034 20.3 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209193|ref|YP_007489307.1| - 4.4e-07 30.5 11.9 2.3e-05 25.0 2.7 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|452209193|ref|YP_007489307.1| - 1e-06 28.9 11.7 1.5e-06 28.4 8.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209193|ref|YP_007489307.1| - 2.7e-06 26.9 13.4 0.0049 16.7 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209193|ref|YP_007489307.1| - 7.5e-06 25.8 22.5 0.001 19.0 9.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209193|ref|YP_007489307.1| - 1.8e-05 24.6 13.4 0.0036 17.5 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209193|ref|YP_007489307.1| - 6.2e-05 22.7 9.5 0.023 14.5 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209193|ref|YP_007489307.1| - 8.7e-05 22.7 11.0 0.0032 17.7 1.4 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209193|ref|YP_007489307.1| - 0.0014 18.4 3.6 0.0018 18.1 2.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209193|ref|YP_007489307.1| - 0.0017 18.7 16.1 0.0066 16.9 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209193|ref|YP_007489307.1| - 0.026 14.9 3.6 0.026 14.9 2.5 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452209193|ref|YP_007489307.1| - 2.1 8.8 11.0 0.84 10.0 0.5 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|452209193|ref|YP_007489307.1| - 6.1 7.4 14.6 2.1 8.9 2.3 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|452209194|ref|YP_007489308.1| - 6.8e-10 39.3 0.2 6.9e-09 36.0 0.0 2.4 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|452209194|ref|YP_007489308.1| - 8.4e-05 22.5 0.0 0.00023 21.1 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452209194|ref|YP_007489308.1| - 0.00013 22.1 0.0 0.00027 21.0 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF457 PF04307.9 gi|452209195|ref|YP_007489309.1| - 2.8e-12 46.2 13.8 5e-12 45.4 9.6 1.4 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Hexapep PF00132.19 gi|452209196|ref|YP_007489310.1| - 2.2e-10 39.5 12.6 2.2e-06 26.9 5.7 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452209196|ref|YP_007489310.1| - 7.7e-06 25.3 15.0 0.00091 18.7 5.9 3.5 3 0 0 3 3 3 3 Hexapeptide repeat of succinyl-transferase DUF362 PF04015.7 gi|452209197|ref|YP_007489311.1| - 8.9e-51 172.2 0.1 1.2e-48 165.3 0.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|452209197|ref|YP_007489311.1| - 5.7e-09 35.2 14.4 3.3e-05 23.3 4.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209197|ref|YP_007489311.1| - 1e-06 28.2 14.9 0.0033 17.2 3.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209197|ref|YP_007489311.1| - 1.7e-06 27.7 14.9 3.3e-06 26.7 10.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209197|ref|YP_007489311.1| - 1.9e-05 24.9 15.3 4.5e-05 23.7 10.6 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209197|ref|YP_007489311.1| - 8.9e-05 22.6 15.5 0.00019 21.6 10.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209197|ref|YP_007489311.1| - 0.00011 22.0 14.8 0.00021 21.0 10.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209197|ref|YP_007489311.1| - 0.00013 21.6 15.1 0.00086 19.0 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452209197|ref|YP_007489311.1| - 0.018 15.5 8.9 0.56 10.8 0.7 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452209197|ref|YP_007489311.1| - 0.031 15.0 12.7 0.62 10.8 1.7 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|452209197|ref|YP_007489311.1| - 0.037 14.0 14.9 0.29 11.1 3.8 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209197|ref|YP_007489311.1| - 2.2 8.6 18.3 7.8 6.9 2.1 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain NAD_synthase PF02540.12 gi|452209198|ref|YP_007489312.1| - 2.5e-55 187.0 0.2 5.8e-33 113.7 0.0 2.1 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.11 gi|452209198|ref|YP_007489312.1| - 0.0042 15.7 0.0 0.011 14.3 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.8 gi|452209198|ref|YP_007489312.1| - 0.0065 15.7 0.0 0.24 10.6 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|452209199|ref|YP_007489313.1| - 0.00072 18.2 0.1 0.0015 17.1 0.0 1.6 1 1 1 2 2 2 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|452209199|ref|YP_007489313.1| - 0.0049 15.8 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.16 gi|452209199|ref|YP_007489313.1| - 0.023 14.2 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase QueC PF06508.8 gi|452209199|ref|YP_007489313.1| - 0.023 14.0 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ATP_bind_4 PF01902.12 gi|452209199|ref|YP_007489313.1| - 0.026 13.8 0.0 0.045 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP-binding region Cytomega_UL84 PF06284.6 gi|452209199|ref|YP_007489313.1| - 0.065 11.6 0.0 0.089 11.1 0.0 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein ATP_bind_3 PF01171.15 gi|452209199|ref|YP_007489313.1| - 0.11 11.9 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 PP-loop family AMP-binding PF00501.23 gi|452209200|ref|YP_007489314.1| - 2.9e-72 243.3 0.0 3.3e-72 243.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|452209200|ref|YP_007489314.1| - 3.4e-07 31.0 0.0 6.7e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.20 gi|452209201|ref|YP_007489315.1| - 3.6e-06 27.1 0.3 4.1e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF2551 PF10826.3 gi|452209202|ref|YP_007489316.1| - 5.7e-34 115.8 0.6 6.4e-34 115.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.14 gi|452209202|ref|YP_007489316.1| - 0.043 13.7 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Ferric uptake regulator family Prenyltransf PF01255.14 gi|452209203|ref|YP_007489317.1| - 4.8e-78 261.3 0.0 6.1e-78 260.9 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Glyoxal_oxid_N PF07250.6 gi|452209203|ref|YP_007489317.1| - 0.12 11.4 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Glyoxal oxidase N-terminus Thioredox_DsbH PF03190.10 gi|452209206|ref|YP_007489320.1| - 3.1e-62 209.1 0.3 8e-62 207.7 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function, DUF255 C5-epim_C PF06662.8 gi|452209206|ref|YP_007489320.1| - 2e-05 23.9 0.9 0.0084 15.4 0.0 3.0 3 0 0 3 3 3 2 D-glucuronyl C5-epimerase C-terminus Glyco_hydro_76 PF03663.9 gi|452209206|ref|YP_007489320.1| - 0.00058 19.3 0.0 0.75 9.1 0.0 2.8 2 1 0 2 2 2 2 Glycosyl hydrolase family 76 Glyco_hydro_88 PF07470.8 gi|452209206|ref|YP_007489320.1| - 0.0051 15.9 0.9 1.3 7.9 0.1 2.9 2 1 1 3 3 3 2 Glycosyl Hydrolase Family 88 LANC_like PF05147.8 gi|452209206|ref|YP_007489320.1| - 0.01 14.4 0.4 0.47 8.9 0.0 3.0 3 0 0 3 3 3 1 Lanthionine synthetase C-like protein GlcNAc_2-epim PF07221.6 gi|452209206|ref|YP_007489320.1| - 0.022 13.8 0.1 1.7 7.5 0.0 2.8 2 1 0 3 3 3 0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Thioredoxin_7 PF13899.1 gi|452209206|ref|YP_007489320.1| - 0.03 14.3 0.3 0.61 10.1 0.2 2.4 1 1 0 1 1 1 0 Thioredoxin-like Pec_lyase PF09492.5 gi|452209206|ref|YP_007489320.1| - 0.043 12.9 0.0 0.41 9.7 0.0 2.4 3 0 0 3 3 3 0 Pectic acid lyase cwf21 PF08312.7 gi|452209206|ref|YP_007489320.1| - 3.4 7.6 7.0 0.13 12.1 0.3 2.2 2 0 0 2 2 2 0 cwf21 domain Cyt-b5 PF00173.23 gi|452209207|ref|YP_007489321.1| - 2.8e-11 43.0 0.2 3.5e-11 42.7 0.1 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pyridox_oxidase PF01243.15 gi|452209208|ref|YP_007489322.1| - 1.4e-15 57.0 0.0 4.9e-15 55.3 0.0 1.7 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.1 gi|452209208|ref|YP_007489322.1| - 4e-08 33.1 0.0 5e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|452209208|ref|YP_007489322.1| - 0.0017 18.2 0.0 0.0024 17.7 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_33 PF13592.1 gi|452209209|ref|YP_007489323.1| - 2e-10 40.0 0.0 2.5e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|452209209|ref|YP_007489323.1| - 0.00016 22.3 0.1 0.00042 21.0 0.0 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_29 PF13551.1 gi|452209209|ref|YP_007489323.1| - 0.0035 17.4 0.0 0.0049 16.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix MvaI_BcnI PF15515.1 gi|452209210|ref|YP_007489324.1| - 0.062 13.3 0.1 0.079 12.9 0.1 1.2 1 0 0 1 1 1 0 MvaI/BcnI restriction endonuclease family AAA_18 PF13238.1 gi|452209212|ref|YP_007489326.1| - 6.6e-27 94.3 4.0 1.8e-26 92.9 2.3 1.8 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|452209212|ref|YP_007489326.1| - 1.1e-16 61.7 1.4 1.5e-16 61.2 0.8 1.4 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|452209212|ref|YP_007489326.1| - 2.5e-05 24.3 0.4 5e-05 23.3 0.2 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|452209212|ref|YP_007489326.1| - 3.6e-05 23.6 0.0 0.00027 20.8 0.0 2.1 1 1 0 1 1 1 1 AAA domain CoaE PF01121.15 gi|452209212|ref|YP_007489326.1| - 0.00068 19.0 0.0 0.045 13.1 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase SKI PF01202.17 gi|452209212|ref|YP_007489326.1| - 0.0027 17.5 0.2 0.11 12.3 0.1 2.3 1 1 0 1 1 1 1 Shikimate kinase MobB PF03205.9 gi|452209212|ref|YP_007489326.1| - 0.0035 17.0 0.5 0.16 11.6 0.1 2.3 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.9 gi|452209212|ref|YP_007489326.1| - 0.0044 16.7 0.2 0.0095 15.6 0.1 1.9 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.7 gi|452209212|ref|YP_007489326.1| - 0.0059 15.7 0.0 0.011 14.8 0.0 1.7 1 1 0 1 1 1 1 Zeta toxin PRK PF00485.13 gi|452209212|ref|YP_007489326.1| - 0.012 15.2 0.1 0.084 12.4 0.0 2.2 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family dNK PF01712.14 gi|452209212|ref|YP_007489326.1| - 0.012 15.4 0.2 0.02 14.7 0.1 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA PF00004.24 gi|452209212|ref|YP_007489326.1| - 0.016 15.4 0.1 0.035 14.3 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.5 gi|452209212|ref|YP_007489326.1| - 0.017 14.3 0.1 0.034 13.3 0.0 1.5 1 1 0 1 1 1 0 Chromatin associated protein KTI12 AAA_22 PF13401.1 gi|452209212|ref|YP_007489326.1| - 0.06 13.4 0.4 0.1 12.7 0.3 1.7 1 1 0 1 1 1 0 AAA domain UPF0180 PF03698.8 gi|452209212|ref|YP_007489326.1| - 0.097 12.5 0.4 5.1 7.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0180) ADK PF00406.17 gi|452209212|ref|YP_007489326.1| - 0.1 12.4 0.2 0.33 10.8 0.1 1.9 1 1 0 1 1 1 0 Adenylate kinase AAA_19 PF13245.1 gi|452209212|ref|YP_007489326.1| - 0.11 12.2 0.8 0.24 11.1 0.3 1.7 2 0 0 2 2 1 0 Part of AAA domain KAP_NTPase PF07693.9 gi|452209212|ref|YP_007489326.1| - 0.11 11.4 0.1 0.21 10.5 0.1 1.5 1 1 0 1 1 1 0 KAP family P-loop domain ArgK PF03308.11 gi|452209212|ref|YP_007489326.1| - 0.11 11.2 0.9 0.17 10.6 0.1 1.7 2 1 0 2 2 2 0 ArgK protein DUF3213 PF11491.3 gi|452209212|ref|YP_007489326.1| - 0.73 9.7 4.5 1.6 8.6 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3213) CTP_transf_2 PF01467.21 gi|452209213|ref|YP_007489327.1| - 1e-15 58.1 0.2 1.4e-15 57.6 0.1 1.2 1 0 0 1 1 1 1 Cytidylyltransferase FrhB_FdhB_C PF04432.8 gi|452209214|ref|YP_007489328.1| - 1.6e-44 151.1 0.1 3.1e-44 150.2 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|452209214|ref|YP_007489328.1| - 5e-18 64.7 0.0 8.5e-18 63.9 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|452209214|ref|YP_007489328.1| - 1.3e-05 24.5 17.8 0.00038 19.9 4.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209214|ref|YP_007489328.1| - 2e-05 24.5 5.3 2e-05 24.5 3.7 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209214|ref|YP_007489328.1| - 2.6e-05 23.9 9.4 2.6e-05 23.9 6.5 2.1 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209214|ref|YP_007489328.1| - 3.9e-05 23.9 23.4 0.00047 20.4 8.3 2.5 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209214|ref|YP_007489328.1| - 0.00023 21.3 8.4 0.00023 21.3 5.8 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209214|ref|YP_007489328.1| - 0.0012 19.1 6.5 0.0012 19.1 4.5 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209214|ref|YP_007489328.1| - 0.0016 18.2 15.8 0.043 13.7 3.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209214|ref|YP_007489328.1| - 0.0031 18.2 9.6 0.021 15.5 6.6 2.4 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452209214|ref|YP_007489328.1| - 0.0041 16.9 14.7 0.0041 16.9 10.2 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209214|ref|YP_007489328.1| - 0.022 15.0 2.1 0.022 15.0 1.4 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452209214|ref|YP_007489328.1| - 0.028 14.2 5.2 0.028 14.2 3.6 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452209214|ref|YP_007489328.1| - 0.056 14.0 6.0 1.7 9.3 0.9 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF2442 PF10387.4 gi|452209214|ref|YP_007489328.1| - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) Fer4_13 PF13370.1 gi|452209214|ref|YP_007489328.1| - 8.6 6.8 13.1 18 5.8 3.7 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain Desulfoferrod_N PF06397.7 gi|452209215|ref|YP_007489329.1| - 4.8e-17 61.0 6.6 5.2e-17 60.9 4.6 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain zf-UDP PF14569.1 gi|452209215|ref|YP_007489329.1| - 0.0074 16.0 1.0 0.0078 15.9 0.7 1.1 1 0 0 1 1 1 1 Zinc-binding RING-finger RRN7 PF11781.3 gi|452209215|ref|YP_007489329.1| - 0.012 15.0 1.2 0.014 14.9 0.8 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription initiation factor Rrn7 NOB1_Zn_bind PF08772.6 gi|452209215|ref|YP_007489329.1| - 0.078 12.8 0.5 0.11 12.3 0.3 1.4 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF4428 PF14471.1 gi|452209215|ref|YP_007489329.1| - 0.34 10.7 2.7 1.1 9.0 1.7 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4428) DUF2180 PF09947.4 gi|452209216|ref|YP_007489330.1| - 1.9e-33 114.0 6.5 2.2e-33 113.8 4.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) FYVE PF01363.16 gi|452209216|ref|YP_007489330.1| - 0.012 15.5 1.8 0.018 14.9 1.2 1.4 1 1 0 1 1 1 0 FYVE zinc finger DZR PF12773.2 gi|452209216|ref|YP_007489330.1| - 4.5 7.1 7.9 51 3.8 5.4 2.1 1 1 0 1 1 1 0 Double zinc ribbon zf-AD PF07776.10 gi|452209216|ref|YP_007489330.1| - 9.2 6.3 8.9 29 4.7 4.9 2.1 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF2180 PF09947.4 gi|452209217|ref|YP_007489331.1| - 8.2e-31 105.5 5.7 9.4e-31 105.3 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) FYVE PF01363.16 gi|452209217|ref|YP_007489331.1| - 0.027 14.3 2.2 0.053 13.4 1.5 1.6 1 1 0 1 1 1 0 FYVE zinc finger zf-UBR PF02207.15 gi|452209217|ref|YP_007489331.1| - 0.13 11.9 2.3 0.59 9.8 0.6 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Tnp_zf-ribbon_2 PF13842.1 gi|452209217|ref|YP_007489331.1| - 0.18 12.2 4.9 0.23 11.8 1.1 2.3 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon DZR PF12773.2 gi|452209217|ref|YP_007489331.1| - 0.35 10.7 3.2 0.85 9.4 2.2 1.7 1 1 0 1 1 1 0 Double zinc ribbon zf-AD PF07776.10 gi|452209217|ref|YP_007489331.1| - 0.77 9.8 0.0 0.77 9.8 0.0 2.4 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) zf-C3HC4_2 PF13923.1 gi|452209217|ref|YP_007489331.1| - 1.1 9.3 8.4 3.1 7.9 1.7 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 gi|452209217|ref|YP_007489331.1| - 1.4 8.6 8.1 1.1 9.0 1.4 2.3 2 1 0 2 2 2 0 zinc-RING finger domain CMD PF02627.15 gi|452209218|ref|YP_007489332.1| - 1.3e-18 66.6 0.1 1.5e-18 66.3 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Desulfoferrodox PF01880.13 gi|452209219|ref|YP_007489333.1| - 3.3e-29 100.9 0.9 7e-29 99.9 0.6 1.5 1 1 0 1 1 1 1 Desulfoferrodoxin Oxysterol_BP PF01237.13 gi|452209219|ref|YP_007489333.1| - 0.11 10.9 0.1 0.12 10.8 0.0 1.1 1 0 0 1 1 1 0 Oxysterol-binding protein Cytochrome_C554 PF13435.1 gi|452209220|ref|YP_007489334.1| - 2.2e-14 53.6 2.4 1.1e-10 41.6 0.2 2.3 1 1 1 2 2 2 2 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.1 gi|452209220|ref|YP_007489334.1| - 1.4e-08 34.2 5.4 0.0048 16.4 0.7 3.4 1 1 1 2 2 2 2 Cytochrome c7 Cytochrom_NNT PF03264.9 gi|452209220|ref|YP_007489334.1| - 7.4e-06 25.4 4.7 0.26 10.7 0.1 3.3 2 1 1 3 3 3 3 NapC/NirT cytochrome c family, N-terminal region C1_1 PF00130.17 gi|452209220|ref|YP_007489334.1| - 0.00018 21.1 4.2 0.1 12.3 0.0 3.5 3 1 0 3 3 3 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrom_c3_2 PF14537.1 gi|452209220|ref|YP_007489334.1| - 0.00075 19.7 9.9 6.4 7.1 0.2 3.8 1 1 1 2 2 2 1 Cytochrome c3 DUF2296 PF10058.4 gi|452209220|ref|YP_007489334.1| - 0.077 12.7 0.4 34 4.2 0.0 3.4 3 0 0 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) DZR PF12773.2 gi|452209220|ref|YP_007489334.1| - 0.084 12.7 4.5 8.2 6.3 0.1 3.3 3 0 0 3 3 3 0 Double zinc ribbon Cytochrome_CBB3 PF13442.1 gi|452209220|ref|YP_007489334.1| - 0.12 12.5 17.6 3 8.0 0.0 4.9 2 2 3 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III zf-BED PF02892.10 gi|452209220|ref|YP_007489334.1| - 0.13 12.0 1.0 18 5.1 0.0 3.1 3 0 0 3 3 3 0 BED zinc finger Paired_CXXCH_1 PF09699.5 gi|452209220|ref|YP_007489334.1| - 0.37 10.3 16.7 24 4.5 0.1 4.9 3 2 2 5 5 5 0 Doubled CXXCH motif (Paired_CXXCH_1) GFA PF04828.9 gi|452209220|ref|YP_007489334.1| - 0.44 10.5 3.7 0.52 10.2 0.1 2.8 1 1 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme FMN_red PF03358.10 gi|452209221|ref|YP_007489335.1| - 1.2e-30 105.9 0.0 1.6e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452209221|ref|YP_007489335.1| - 1e-05 25.1 0.0 1.8e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavoprotein PF02441.14 gi|452209222|ref|YP_007489336.1| - 9.2e-20 70.6 0.0 1.3e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Rubrerythrin PF02915.12 gi|452209223|ref|YP_007489337.1| - 2.7e-12 47.1 8.8 4.6e-12 46.4 6.1 1.4 1 1 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.5 gi|452209223|ref|YP_007489337.1| - 1.6e-05 25.1 5.0 0.016 15.4 0.4 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF2383) Ferritin_2 PF13668.1 gi|452209223|ref|YP_007489337.1| - 2.1e-05 24.4 1.4 0.1 12.5 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain Ferritin PF00210.19 gi|452209223|ref|YP_007489337.1| - 0.00016 21.3 6.0 0.00048 19.8 4.1 1.7 1 1 1 2 2 2 2 Ferritin-like domain DUF2202 PF09968.4 gi|452209223|ref|YP_007489337.1| - 0.00043 19.9 1.6 0.31 10.7 0.0 2.1 2 0 0 2 2 2 2 Uncharacterized protein domain (DUF2202) COQ7 PF03232.8 gi|452209223|ref|YP_007489337.1| - 0.02 14.3 1.7 0.036 13.5 0.2 1.9 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 FadR_C PF07840.7 gi|452209223|ref|YP_007489337.1| - 0.23 11.1 2.0 0.38 10.3 0.2 1.9 2 0 0 2 2 2 0 FadR C-terminal domain OmdA PF13376.1 gi|452209223|ref|YP_007489337.1| - 2 8.1 7.0 7.6 6.2 0.5 3.4 2 2 2 4 4 4 0 Bacteriocin-protection, YdeI or OmpD-Associated Lactamase_B PF00753.22 gi|452209225|ref|YP_007489339.1| - 7e-06 25.8 0.0 7.3e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily AAL_decarboxy PF03306.8 gi|452209228|ref|YP_007489342.1| - 2.1e-80 268.8 0.1 4.6e-80 267.7 0.0 1.5 1 1 0 1 1 1 1 Alpha-acetolactate decarboxylase ANTH PF07651.11 gi|452209229|ref|YP_007489343.1| - 0.059 12.0 0.1 0.061 12.0 0.1 1.0 1 0 0 1 1 1 0 ANTH domain Iso_dh PF00180.15 gi|452209230|ref|YP_007489344.1| - 2e-95 319.6 0.0 2.3e-95 319.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF204 PF02659.10 gi|452209231|ref|YP_007489345.1| - 1.7e-37 127.3 19.6 1e-19 70.3 4.2 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF DUF373 PF04123.8 gi|452209231|ref|YP_007489345.1| - 0.063 12.2 0.6 0.072 12.0 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Aconitase_C PF00694.14 gi|452209233|ref|YP_007489347.1| - 4e-21 75.4 0.0 6.5e-21 74.7 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|452209233|ref|YP_007489347.1| - 1.2e-05 24.8 0.0 0.0013 18.1 0.0 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus WSK PF03832.8 gi|452209233|ref|YP_007489347.1| - 0.061 12.6 0.4 0.11 11.8 0.3 1.4 1 0 0 1 1 1 0 WSK motif STT3 PF02516.9 gi|452209234|ref|YP_007489348.1| - 5e-36 124.6 39.1 3.9e-34 118.4 27.1 2.2 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Glycos_transf_1 PF00534.15 gi|452209235|ref|YP_007489349.1| - 1.9e-21 76.2 0.0 3.2e-21 75.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209235|ref|YP_007489349.1| - 4e-11 43.1 0.0 9.9e-11 41.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452209235|ref|YP_007489349.1| - 4.2e-09 36.7 0.0 3.2e-08 33.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|452209235|ref|YP_007489349.1| - 1.1e-06 28.4 0.0 2.6e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|452209235|ref|YP_007489349.1| - 9e-06 25.5 0.1 1.8e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_1 PF00534.15 gi|452209236|ref|YP_007489350.1| - 1.4e-28 99.4 0.3 2.3e-28 98.7 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209236|ref|YP_007489350.1| - 1.2e-25 90.3 0.2 1.6e-25 89.8 0.2 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452209236|ref|YP_007489350.1| - 5e-24 85.2 0.0 1.1e-23 84.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|452209236|ref|YP_007489350.1| - 5.8e-14 52.3 0.0 2.6e-13 50.2 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|452209236|ref|YP_007489350.1| - 1.2e-11 44.6 0.1 2.1e-11 43.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|452209236|ref|YP_007489350.1| - 0.0001 22.5 0.1 0.013 15.7 0.0 2.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|452209236|ref|YP_007489350.1| - 0.00018 21.1 0.4 0.063 12.7 0.0 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain NTP_transferase PF00483.18 gi|452209237|ref|YP_007489351.1| - 8.2e-30 103.8 0.0 9.7e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|452209237|ref|YP_007489351.1| - 0.051 13.6 0.0 0.075 13.1 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain DUF218 PF02698.12 gi|452209237|ref|YP_007489351.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 DUF218 domain Methyltransf_31 PF13847.1 gi|452209238|ref|YP_007489352.1| - 1.7e-41 141.3 0.0 2.4e-41 140.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209238|ref|YP_007489352.1| - 1.3e-23 83.3 0.0 2.9e-23 82.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209238|ref|YP_007489352.1| - 7e-21 74.4 0.0 1.1e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|452209238|ref|YP_007489352.1| - 1.3e-16 61.1 0.6 2.1e-16 60.5 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209238|ref|YP_007489352.1| - 2.8e-16 59.7 0.1 7.2e-16 58.3 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209238|ref|YP_007489352.1| - 2.3e-15 56.6 0.0 3.1e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452209238|ref|YP_007489352.1| - 2.5e-12 46.8 0.0 3.8e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|452209238|ref|YP_007489352.1| - 3e-12 46.5 0.0 5.2e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452209238|ref|YP_007489352.1| - 1.8e-11 44.3 0.0 3.1e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452209238|ref|YP_007489352.1| - 4.3e-09 35.9 0.0 7.1e-09 35.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.10 gi|452209238|ref|YP_007489352.1| - 6.5e-08 32.4 0.3 2.9e-07 30.3 0.2 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase UPF0020 PF01170.13 gi|452209238|ref|YP_007489352.1| - 2.3e-07 30.5 0.0 4e-07 29.7 0.0 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|452209238|ref|YP_007489352.1| - 6e-06 25.5 0.0 8.6e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|452209238|ref|YP_007489352.1| - 2.5e-05 23.9 0.0 4.2e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|452209238|ref|YP_007489352.1| - 9.3e-05 22.0 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.15 gi|452209238|ref|YP_007489352.1| - 0.00055 19.0 0.0 0.0008 18.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.12 gi|452209238|ref|YP_007489352.1| - 0.00066 18.7 0.0 0.0027 16.7 0.0 1.8 1 1 0 2 2 2 1 Putative methyltransferase Methyltransf_3 PF01596.12 gi|452209238|ref|YP_007489352.1| - 0.0055 15.7 0.0 0.008 15.2 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase FtsJ PF01728.14 gi|452209238|ref|YP_007489352.1| - 0.0095 15.9 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Met_10 PF02475.11 gi|452209238|ref|YP_007489352.1| - 0.024 14.2 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein DOT1 PF08123.8 gi|452209238|ref|YP_007489352.1| - 0.054 12.8 0.1 0.084 12.1 0.1 1.4 1 1 0 1 1 1 0 Histone methylation protein DOT1 GidB PF02527.10 gi|452209238|ref|YP_007489352.1| - 0.097 11.8 0.1 0.21 10.6 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_24 PF13578.1 gi|452209238|ref|YP_007489352.1| - 0.098 13.4 0.0 0.16 12.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain YhzD PF14120.1 gi|452209239|ref|YP_007489353.1| - 0.2 11.6 0.7 0.33 10.8 0.5 1.4 1 0 0 1 1 1 0 YhzD-like protein NAD_binding_1 PF00175.16 gi|452209243|ref|YP_007489357.1| - 2.6e-18 66.5 0.0 5.2e-18 65.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|452209243|ref|YP_007489357.1| - 2.1e-12 46.3 3.7 4.1e-12 45.3 2.6 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|452209243|ref|YP_007489357.1| - 5.5e-05 23.2 0.0 9.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cpn10 PF00166.16 gi|452209243|ref|YP_007489357.1| - 0.008 16.0 1.1 0.066 13.1 0.0 2.5 1 1 1 2 2 2 1 Chaperonin 10 Kd subunit Pept_tRNA_hydro PF01195.14 gi|452209243|ref|YP_007489357.1| - 0.043 13.2 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase NAD_binding_6 PF08030.7 gi|452209243|ref|YP_007489357.1| - 0.075 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer4_20 PF14691.1 gi|452209244|ref|YP_007489358.1| - 9.6e-45 150.7 6.1 1.5e-44 150.1 4.2 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.9 gi|452209244|ref|YP_007489358.1| - 3.7e-20 72.6 4.7 1.6e-10 41.1 0.3 4.5 1 1 2 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|452209244|ref|YP_007489358.1| - 4.5e-17 62.2 3.9 3.9e-08 33.5 0.2 3.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|452209244|ref|YP_007489358.1| - 2e-14 54.1 0.2 1.4e-05 25.2 0.0 3.2 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.1 gi|452209244|ref|YP_007489358.1| - 1.2e-08 35.1 0.3 0.0015 18.7 0.1 2.7 2 1 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_8 PF13450.1 gi|452209244|ref|YP_007489358.1| - 1.6e-08 34.4 1.4 2.8e-08 33.6 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.16 gi|452209244|ref|YP_007489358.1| - 2.9e-07 30.2 9.7 0.0025 17.3 0.0 3.4 4 0 0 4 4 3 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.12 gi|452209244|ref|YP_007489358.1| - 4.5e-07 29.1 0.1 5.9e-06 25.5 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.2 gi|452209244|ref|YP_007489358.1| - 4.7e-07 29.2 2.7 0.00011 21.4 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|452209244|ref|YP_007489358.1| - 6.6e-06 25.2 1.2 6.6e-06 25.2 0.8 2.9 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.9 gi|452209244|ref|YP_007489358.1| - 2.7e-05 22.8 0.4 2.7e-05 22.8 0.3 2.0 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.17 gi|452209244|ref|YP_007489358.1| - 2.7e-05 23.2 3.2 0.0004 19.3 0.0 2.8 3 0 0 3 3 3 1 Glucose inhibited division protein A DAO PF01266.19 gi|452209244|ref|YP_007489358.1| - 4.5e-05 22.5 4.8 8.1e-05 21.6 0.1 2.8 3 1 0 3 3 3 1 FAD dependent oxidoreductase Shikimate_DH PF01488.15 gi|452209244|ref|YP_007489358.1| - 8.2e-05 22.7 0.7 0.21 11.7 0.0 3.9 5 0 0 5 5 4 1 Shikimate / quinate 5-dehydrogenase ELFV_dehydrog PF00208.16 gi|452209244|ref|YP_007489358.1| - 0.00011 21.8 0.1 0.13 11.8 0.0 2.2 2 0 0 2 2 2 2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FAD_binding_3 PF01494.14 gi|452209244|ref|YP_007489358.1| - 0.00031 19.9 0.7 0.0012 18.0 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain 2-Hacid_dh_C PF02826.14 gi|452209244|ref|YP_007489358.1| - 0.0007 18.7 0.0 0.94 8.6 0.0 2.6 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|452209244|ref|YP_007489358.1| - 0.0011 19.4 0.5 1 9.8 0.0 3.1 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent FMO-like PF00743.14 gi|452209244|ref|YP_007489358.1| - 0.0011 17.2 0.0 0.3 9.2 0.0 2.3 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Oxidored_nitro PF00148.14 gi|452209244|ref|YP_007489358.1| - 0.0012 17.5 2.0 0.35 9.4 0.0 2.5 2 1 1 3 3 3 2 Nitrogenase component 1 type Oxidoreductase UDPG_MGDP_dh_N PF03721.9 gi|452209244|ref|YP_007489358.1| - 0.0016 17.8 0.1 0.0075 15.6 0.1 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ-1_PfpI PF01965.19 gi|452209244|ref|YP_007489358.1| - 0.0026 17.2 0.2 0.14 11.5 0.0 2.8 3 0 0 3 3 2 1 DJ-1/PfpI family NAD_Gly3P_dh_N PF01210.18 gi|452209244|ref|YP_007489358.1| - 0.0056 16.4 0.4 0.091 12.4 0.1 2.5 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.19 gi|452209244|ref|YP_007489358.1| - 0.0058 15.7 0.1 0.0058 15.7 0.1 1.8 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase CPSase_L_chain PF00289.17 gi|452209244|ref|YP_007489358.1| - 0.0093 16.0 0.2 3.9 7.6 0.0 2.8 3 0 0 3 3 2 1 Carbamoyl-phosphate synthase L chain, N-terminal domain NAD_binding_9 PF13454.1 gi|452209244|ref|YP_007489358.1| - 0.016 14.9 0.2 0.068 12.9 0.1 2.1 3 0 0 3 3 2 0 FAD-NAD(P)-binding NAD_binding_10 PF13460.1 gi|452209244|ref|YP_007489358.1| - 0.017 15.1 4.3 9 6.2 0.1 4.3 4 1 1 5 5 5 0 NADH(P)-binding PALP PF00291.20 gi|452209244|ref|YP_007489358.1| - 0.021 14.0 1.6 0.45 9.7 0.0 3.0 2 2 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme K_oxygenase PF13434.1 gi|452209244|ref|YP_007489358.1| - 0.021 13.7 0.0 2.1 7.1 0.0 2.4 3 0 0 3 3 2 0 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.13 gi|452209244|ref|YP_007489358.1| - 0.027 14.1 0.2 0.3 10.7 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YjeF_N PF03853.10 gi|452209244|ref|YP_007489358.1| - 0.032 13.8 0.0 6.7 6.2 0.0 2.4 2 0 0 2 2 2 0 YjeF-related protein N-terminus TrkA_N PF02254.13 gi|452209244|ref|YP_007489358.1| - 0.049 13.6 0.1 10 6.1 0.0 2.6 2 0 0 2 2 2 0 TrkA-N domain Trp_halogenase PF04820.9 gi|452209244|ref|YP_007489358.1| - 0.35 9.4 3.6 0.16 10.5 0.2 1.8 2 0 0 2 2 2 0 Tryptophan halogenase AdoHcyase_NAD PF00670.16 gi|452209244|ref|YP_007489358.1| - 0.83 9.4 5.5 10 5.8 0.0 3.0 3 0 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FTHFS PF01268.14 gi|452209245|ref|YP_007489359.1| - 0.0097 13.9 0.7 0.014 13.4 0.5 1.2 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase SLS PF14611.1 gi|452209245|ref|YP_007489359.1| - 0.023 14.1 3.2 0.034 13.5 2.2 1.3 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator DUF4398 PF14346.1 gi|452209245|ref|YP_007489359.1| - 0.053 13.5 7.8 8.8 6.4 0.2 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4398) DIT1_PvcA PF05141.7 gi|452209245|ref|YP_007489359.1| - 0.11 11.8 0.8 0.16 11.2 0.5 1.3 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein Fib_alpha PF08702.5 gi|452209245|ref|YP_007489359.1| - 0.24 11.5 4.4 1.4 9.0 0.6 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4363 PF14276.1 gi|452209245|ref|YP_007489359.1| - 0.45 10.2 8.6 6.7 6.4 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4363) Tropomyosin_1 PF12718.2 gi|452209245|ref|YP_007489359.1| - 1.1 9.1 9.0 0.21 11.4 3.4 1.9 2 0 0 2 2 2 0 Tropomyosin like TcpE PF12648.2 gi|452209247|ref|YP_007489361.1| - 2.4 8.3 7.1 2.9 8.0 4.9 1.1 1 0 0 1 1 1 0 TcpE family NikR_C PF08753.6 gi|452209248|ref|YP_007489362.1| - 1.6e-31 107.9 1.2 2.2e-31 107.5 0.8 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|452209248|ref|YP_007489362.1| - 2.9e-09 36.4 0.9 4.5e-09 35.8 0.0 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family ARD PF03079.9 gi|452209249|ref|YP_007489363.1| - 0.0015 18.4 0.0 0.0017 18.3 0.0 1.0 1 0 0 1 1 1 1 ARD/ARD' family Nitroreductase PF00881.19 gi|452209250|ref|YP_007489364.1| - 4.5e-34 117.6 0.0 5.7e-34 117.3 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|452209250|ref|YP_007489364.1| - 0.012 14.8 0.3 0.15 11.2 0.2 2.5 1 1 1 2 2 2 0 Putative TM nitroreductase DUF4258 PF14076.1 gi|452209250|ref|YP_007489364.1| - 0.059 13.3 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) IlvN PF07991.7 gi|452209252|ref|YP_007489366.1| - 3.3e-80 267.2 0.5 5e-80 266.6 0.3 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|452209252|ref|YP_007489366.1| - 5e-54 182.1 0.2 6.9e-54 181.7 0.2 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.14 gi|452209252|ref|YP_007489366.1| - 2.4e-07 30.0 0.0 4.9e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|452209252|ref|YP_007489366.1| - 3e-07 30.7 0.1 1.1e-06 28.9 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|452209252|ref|YP_007489366.1| - 5.9e-07 29.4 0.0 1e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.16 gi|452209252|ref|YP_007489366.1| - 0.0011 18.7 0.0 0.002 17.9 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.14 gi|452209252|ref|YP_007489366.1| - 0.0079 16.6 0.0 0.019 15.4 0.0 1.7 1 0 0 1 1 1 1 CoA binding domain ApbA PF02558.11 gi|452209252|ref|YP_007489366.1| - 0.022 14.2 0.1 0.048 13.1 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Nitro_FeMo-Co PF02579.12 gi|452209252|ref|YP_007489366.1| - 0.03 14.4 0.0 0.074 13.1 0.0 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Rossmann-like PF10727.4 gi|452209252|ref|YP_007489366.1| - 0.11 12.2 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Rossmann-like domain GFO_IDH_MocA PF01408.17 gi|452209252|ref|YP_007489366.1| - 0.12 12.9 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ALS_ss_C PF10369.4 gi|452209253|ref|YP_007489367.1| - 1.5e-33 114.3 2.7 1.5e-33 114.3 1.9 1.9 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|452209253|ref|YP_007489367.1| - 1.3e-21 76.2 0.6 5.8e-20 70.8 0.1 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 gi|452209253|ref|YP_007489367.1| - 2e-16 59.0 2.6 4.7e-15 54.7 0.2 2.8 2 1 1 3 3 3 1 ACT domain ACT_4 PF13291.1 gi|452209253|ref|YP_007489367.1| - 6.5e-06 26.4 1.2 6.5e-06 26.4 0.8 1.8 2 1 0 2 2 2 1 ACT domain ACT_6 PF13740.1 gi|452209253|ref|YP_007489367.1| - 0.0078 15.9 0.5 5.1 6.8 0.1 3.4 2 2 0 2 2 2 1 ACT domain NIL PF09383.5 gi|452209253|ref|YP_007489367.1| - 0.039 13.5 0.0 0.6 9.7 0.0 2.3 2 0 0 2 2 2 0 NIL domain SLS PF14611.1 gi|452209253|ref|YP_007489367.1| - 0.042 13.2 0.5 0.1 11.9 0.3 1.7 1 1 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator Nucleo_P87 PF07267.6 gi|452209253|ref|YP_007489367.1| - 0.042 12.5 0.5 0.049 12.3 0.4 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 YbbR PF07949.7 gi|452209253|ref|YP_007489367.1| - 0.064 13.3 4.0 2.6 8.2 0.0 2.4 2 0 0 2 2 2 0 YbbR-like protein Ras_bdg_2 PF14847.1 gi|452209253|ref|YP_007489367.1| - 0.089 12.7 0.1 0.52 10.2 0.0 2.0 2 0 0 2 2 2 0 Ras-binding domain of Byr2 KH_1 PF00013.24 gi|452209253|ref|YP_007489367.1| - 0.52 9.9 3.8 0.47 10.1 0.3 2.6 2 1 0 2 2 2 0 KH domain TPP_enzyme_N PF02776.13 gi|452209254|ref|YP_007489368.1| - 2.9e-62 209.1 0.1 2.8e-61 205.9 0.0 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|452209254|ref|YP_007489368.1| - 3.7e-56 188.9 0.0 3.4e-55 185.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|452209254|ref|YP_007489368.1| - 1e-49 167.8 0.1 3.1e-49 166.2 0.0 1.9 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.14 gi|452209254|ref|YP_007489368.1| - 0.0064 16.0 0.0 0.015 14.8 0.0 1.6 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HMGL-like PF00682.14 gi|452209256|ref|YP_007489370.1| - 9.5e-71 238.1 1.0 2e-70 237.1 0.7 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|452209256|ref|YP_007489370.1| - 1.6e-36 125.0 1.9 3e-36 124.1 1.3 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF489 PF04356.7 gi|452209256|ref|YP_007489370.1| - 0.11 12.1 0.0 0.93 9.0 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF489) Peptidase_M42 PF05343.9 gi|452209257|ref|YP_007489371.1| - 2.8e-116 387.3 0.9 3.3e-116 387.1 0.6 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.23 gi|452209257|ref|YP_007489371.1| - 3e-09 36.6 0.0 4.8e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|452209257|ref|YP_007489371.1| - 0.027 14.2 0.0 0.29 10.8 0.0 2.2 2 0 0 2 2 2 0 Peptidase family M28 Peptidase_M18 PF02127.10 gi|452209257|ref|YP_007489371.1| - 0.045 12.2 0.0 0.073 11.5 0.0 1.3 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Prefoldin_2 PF01920.15 gi|452209258|ref|YP_007489372.1| - 4e-25 87.6 17.7 4.5e-25 87.4 12.3 1.0 1 0 0 1 1 1 1 Prefoldin subunit IMS PF00817.15 gi|452209258|ref|YP_007489372.1| - 0.0024 17.6 1.2 0.0032 17.2 0.8 1.1 1 0 0 1 1 1 1 impB/mucB/samB family Snf7 PF03357.16 gi|452209258|ref|YP_007489372.1| - 0.0085 15.5 14.1 0.12 11.7 3.4 2.2 2 0 0 2 2 2 2 Snf7 GAS PF13851.1 gi|452209258|ref|YP_007489372.1| - 0.026 13.6 16.0 0.11 11.7 11.1 1.8 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF4559 PF15112.1 gi|452209258|ref|YP_007489372.1| - 0.03 13.4 7.3 0.033 13.3 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF948 PF06103.6 gi|452209258|ref|YP_007489372.1| - 0.051 13.4 9.4 0.29 11.0 0.6 2.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Phasin_2 PF09361.5 gi|452209258|ref|YP_007489372.1| - 0.092 12.7 9.3 0.09 12.8 4.9 2.1 1 1 0 1 1 1 0 Phasin protein Curto_V3 PF07436.6 gi|452209258|ref|YP_007489372.1| - 0.095 12.8 1.0 0.29 11.3 0.1 2.0 2 1 0 2 2 2 0 Curtovirus V3 protein DUF1465 PF07323.7 gi|452209258|ref|YP_007489372.1| - 0.16 11.5 7.7 1.5 8.3 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) Binary_toxB PF03495.9 gi|452209258|ref|YP_007489372.1| - 0.2 10.2 2.5 0.23 10.0 1.7 1.0 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Gp58 PF07902.6 gi|452209258|ref|YP_007489372.1| - 0.26 9.4 5.4 0.36 8.9 3.8 1.2 1 0 0 1 1 1 0 gp58-like protein Init_tRNA_PT PF04179.7 gi|452209258|ref|YP_007489372.1| - 0.3 9.8 7.0 0.34 9.7 4.8 1.0 1 0 0 1 1 1 0 Initiator tRNA phosphoribosyl transferase Viral_P18 PF04521.8 gi|452209258|ref|YP_007489372.1| - 0.86 9.0 10.1 1 8.7 0.8 2.3 2 0 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein Spc24 PF08286.6 gi|452209258|ref|YP_007489372.1| - 1.1 9.0 12.5 0.99 9.1 4.0 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 V_ATPase_I PF01496.14 gi|452209258|ref|YP_007489372.1| - 1.2 6.8 8.1 1.8 6.3 5.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family H-kinase_dim PF02895.9 gi|452209258|ref|YP_007489372.1| - 1.2 9.4 11.3 2.8 8.3 1.6 2.4 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Laminin_II PF06009.7 gi|452209258|ref|YP_007489372.1| - 1.5 8.5 13.4 11 5.7 9.3 1.9 1 1 0 1 1 1 0 Laminin Domain II DUF4239 PF14023.1 gi|452209258|ref|YP_007489372.1| - 1.5 8.1 5.2 1.4 8.2 3.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) Mnd1 PF03962.10 gi|452209258|ref|YP_007489372.1| - 1.6 8.3 13.9 8.4 6.0 1.6 2.1 1 1 1 2 2 2 0 Mnd1 family CENP-F_leu_zip PF10473.4 gi|452209258|ref|YP_007489372.1| - 1.7 8.4 19.3 21 4.9 13.7 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1825 PF08855.5 gi|452209258|ref|YP_007489372.1| - 2.5 8.1 9.8 3.7 7.5 6.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1825) DUF3552 PF12072.3 gi|452209258|ref|YP_007489372.1| - 2.6 7.2 21.6 0.19 10.9 4.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4140 PF13600.1 gi|452209258|ref|YP_007489372.1| - 3 8.3 12.9 6.2 7.3 1.5 2.4 1 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Syntaxin PF00804.20 gi|452209258|ref|YP_007489372.1| - 3.3 7.9 15.3 1.6e+02 2.5 10.6 2.2 1 1 0 1 1 1 0 Syntaxin Prefoldin PF02996.12 gi|452209258|ref|YP_007489372.1| - 4.4 6.9 16.0 1.8e+02 1.8 11.1 2.5 1 1 0 1 1 1 0 Prefoldin subunit Tup_N PF08581.5 gi|452209258|ref|YP_007489372.1| - 4.7 7.4 13.8 0.15 12.2 3.8 2.5 2 1 0 2 2 2 0 Tup N-terminal Adeno_PIX PF03955.9 gi|452209258|ref|YP_007489372.1| - 4.8 7.7 11.7 1.3 9.5 2.9 2.1 1 1 1 2 2 2 0 Adenovirus hexon-associated protein (IX) Spc7 PF08317.6 gi|452209258|ref|YP_007489372.1| - 5.2 5.6 15.4 9.4 4.7 10.7 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein Tweety PF04906.8 gi|452209258|ref|YP_007489372.1| - 5.7 5.2 6.5 0.88 7.9 1.1 1.7 1 1 1 2 2 2 0 Tweety Syntaxin_2 PF14523.1 gi|452209258|ref|YP_007489372.1| - 8.2 6.5 15.8 42 4.2 10.9 1.9 1 1 0 1 1 1 0 Syntaxin-like protein APG6 PF04111.7 gi|452209258|ref|YP_007489372.1| - 9.6 5.1 17.8 89 1.9 12.4 1.9 1 1 0 1 1 1 0 Autophagy protein Apg6 DHH PF01368.15 gi|452209259|ref|YP_007489373.1| - 3.6e-12 46.1 0.6 1.7e-11 43.9 0.4 1.9 1 1 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|452209259|ref|YP_007489373.1| - 2.3e-08 33.6 0.9 5.5e-08 32.4 0.6 1.7 1 0 0 1 1 1 1 DHHA1 domain DUF956 PF06115.6 gi|452209259|ref|YP_007489373.1| - 0.086 12.4 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF956) AMP-binding_C_2 PF14535.1 gi|452209260|ref|YP_007489374.1| - 4.4e-32 109.9 0.4 1.1e-31 108.7 0.0 1.9 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|452209260|ref|YP_007489374.1| - 1.4e-25 89.5 0.1 3.3e-25 88.3 0.0 1.6 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|452209260|ref|YP_007489374.1| - 1.1e-07 30.8 0.0 0.00013 20.7 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE GH3 PF03321.8 gi|452209260|ref|YP_007489374.1| - 0.097 11.1 0.0 1.2 7.5 0.0 2.2 2 0 0 2 2 2 0 GH3 auxin-responsive promoter ACT PF01842.20 gi|452209262|ref|YP_007489376.1| - 4.7e-20 70.6 0.2 4.5e-10 38.7 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.1 gi|452209262|ref|YP_007489376.1| - 2.4e-07 30.1 0.3 0.021 14.3 0.0 2.6 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.1 gi|452209262|ref|YP_007489376.1| - 1.2e-06 28.7 0.0 0.0049 17.1 0.0 2.3 2 1 0 2 2 2 2 ACT domain DUF2103 PF09876.4 gi|452209264|ref|YP_007489378.1| - 2e-40 136.7 1.1 2.4e-40 136.4 0.8 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) Semialdhyde_dh PF01118.19 gi|452209264|ref|YP_007489378.1| - 0.045 14.0 0.1 0.058 13.7 0.1 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NYN PF01936.13 gi|452209266|ref|YP_007489380.1| - 1.5e-23 83.6 0.0 2.1e-23 83.2 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.8 gi|452209266|ref|YP_007489380.1| - 0.018 14.5 0.0 0.95 8.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF460) Rhomboid PF01694.17 gi|452209269|ref|YP_007489383.1| - 1.1e-31 109.7 14.1 1.1e-31 109.7 9.8 1.8 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.5 gi|452209269|ref|YP_007489383.1| - 1.6e-05 25.1 0.6 1.6e-05 25.1 0.4 2.3 2 1 1 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) DUF1576 PF07613.6 gi|452209269|ref|YP_007489383.1| - 0.0045 16.5 4.4 0.0072 15.8 3.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1576) DUF457 PF04307.9 gi|452209269|ref|YP_007489383.1| - 0.84 8.9 7.3 0.094 12.0 1.8 1.8 2 0 0 2 2 2 0 Predicted membrane-bound metal-dependent hydrolase (DUF457) Prismane PF03063.15 gi|452209270|ref|YP_007489384.1| - 3.6e-115 385.2 3.5 7.1e-96 321.6 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.2 gi|452209270|ref|YP_007489384.1| - 3.6e-06 27.2 7.4 3.6e-06 27.2 5.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452209270|ref|YP_007489384.1| - 1.3e-05 25.5 10.9 0.006 16.9 0.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209270|ref|YP_007489384.1| - 3.4e-05 24.0 10.1 3.4e-05 24.0 7.0 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209270|ref|YP_007489384.1| - 4.1e-05 23.5 7.0 4.1e-05 23.5 4.8 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209270|ref|YP_007489384.1| - 5.6e-05 22.9 6.3 5.6e-05 22.9 4.3 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209270|ref|YP_007489384.1| - 0.00095 18.9 18.7 0.0062 16.3 9.6 3.5 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209270|ref|YP_007489384.1| - 0.0024 17.6 22.1 0.018 14.9 1.4 3.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452209270|ref|YP_007489384.1| - 0.0077 16.5 0.9 0.0077 16.5 0.6 3.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Ribosomal_S2 PF00318.15 gi|452209270|ref|YP_007489384.1| - 0.028 13.6 0.0 0.053 12.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S2 Fer4_4 PF12800.2 gi|452209270|ref|YP_007489384.1| - 0.034 14.4 26.0 0.12 12.7 1.2 4.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209270|ref|YP_007489384.1| - 0.055 14.2 11.1 0.61 10.8 0.1 3.4 3 0 0 3 3 2 0 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|452209270|ref|YP_007489384.1| - 0.21 11.2 26.4 0.047 13.3 2.4 3.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452209270|ref|YP_007489384.1| - 0.38 10.7 27.2 0.045 13.6 2.6 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain CO_dh PF02552.11 gi|452209271|ref|YP_007489385.1| - 3.4e-31 108.0 0.0 4e-31 107.8 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.17 gi|452209271|ref|YP_007489385.1| - 1.2e-08 34.7 0.0 1.6e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain SpoVS PF04232.7 gi|452209271|ref|YP_007489385.1| - 0.017 14.7 0.9 0.2 11.2 0.1 2.4 2 2 0 2 2 2 0 Stage V sporulation protein S (SpoVS) SBP_bac_11 PF13531.1 gi|452209271|ref|YP_007489385.1| - 0.022 14.4 0.2 0.096 12.2 0.2 1.8 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein Mfa2 PF08842.5 gi|452209271|ref|YP_007489385.1| - 0.11 11.8 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CdhC PF03598.10 gi|452209272|ref|YP_007489386.1| - 5.8e-186 617.9 0.2 7e-186 617.6 0.1 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CbiA PF01656.18 gi|452209273|ref|YP_007489387.1| - 3.4e-32 111.4 0.3 4.3e-32 111.0 0.2 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|452209273|ref|YP_007489387.1| - 6.2e-09 35.4 2.7 5.5e-08 32.3 1.9 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|452209273|ref|YP_007489387.1| - 4e-07 29.3 1.9 6.9e-06 25.3 1.5 2.3 1 1 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|452209273|ref|YP_007489387.1| - 7.6e-06 25.9 0.2 0.033 14.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.10 gi|452209273|ref|YP_007489387.1| - 2.3e-05 24.1 0.4 0.14 11.8 0.1 2.2 2 0 0 2 2 2 2 NTPase YhjQ PF06564.7 gi|452209273|ref|YP_007489387.1| - 0.00016 21.1 0.1 0.09 12.1 0.0 2.4 2 1 0 2 2 2 2 YhjQ protein MipZ PF09140.6 gi|452209273|ref|YP_007489387.1| - 0.00022 20.3 0.1 0.0085 15.2 0.0 2.3 2 0 0 2 2 2 1 ATPase MipZ AAA_26 PF13500.1 gi|452209273|ref|YP_007489387.1| - 0.00038 20.1 2.9 0.07 12.7 0.1 2.3 2 0 0 2 2 2 2 AAA domain Toprim PF01751.17 gi|452209273|ref|YP_007489387.1| - 0.00075 19.4 0.1 0.39 10.7 0.0 2.4 2 0 0 2 2 2 1 Toprim domain DUF87 PF01935.12 gi|452209273|ref|YP_007489387.1| - 0.0013 18.6 2.7 0.0034 17.2 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function DUF87 AAA_16 PF13191.1 gi|452209273|ref|YP_007489387.1| - 0.0013 18.7 0.1 0.0026 17.7 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|452209273|ref|YP_007489387.1| - 0.0014 19.4 3.3 0.055 14.2 2.0 2.5 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|452209273|ref|YP_007489387.1| - 0.0018 18.0 0.0 0.0041 16.8 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.1 gi|452209273|ref|YP_007489387.1| - 0.0018 17.9 0.2 0.0049 16.5 0.2 1.8 1 0 0 1 1 1 1 Part of AAA domain APS_kinase PF01583.15 gi|452209273|ref|YP_007489387.1| - 0.0039 16.8 0.1 0.0075 15.9 0.1 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_22 PF13401.1 gi|452209273|ref|YP_007489387.1| - 0.0084 16.2 1.1 0.13 12.4 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452209273|ref|YP_007489387.1| - 0.011 16.1 0.4 0.023 15.0 0.2 1.8 1 1 0 1 1 1 0 AAA domain PRK PF00485.13 gi|452209273|ref|YP_007489387.1| - 0.016 14.7 0.2 0.11 12.0 0.0 2.0 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family ABC_tran PF00005.22 gi|452209273|ref|YP_007489387.1| - 0.022 15.0 0.0 0.032 14.5 0.0 1.6 1 1 0 1 1 1 0 ABC transporter KaiC PF06745.8 gi|452209273|ref|YP_007489387.1| - 0.023 13.8 0.4 0.23 10.5 0.0 2.3 2 1 0 2 2 2 0 KaiC SRP54 PF00448.17 gi|452209273|ref|YP_007489387.1| - 0.024 14.1 2.7 0.18 11.2 0.6 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF2075 PF09848.4 gi|452209273|ref|YP_007489387.1| - 0.025 13.5 0.2 0.03 13.2 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DUF2365 PF10157.4 gi|452209273|ref|YP_007489387.1| - 0.026 14.3 0.1 0.046 13.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2365) AAA_30 PF13604.1 gi|452209273|ref|YP_007489387.1| - 0.032 13.8 0.4 0.089 12.3 0.3 1.9 1 1 0 1 1 1 0 AAA domain Toprim_4 PF13662.1 gi|452209273|ref|YP_007489387.1| - 0.034 14.1 0.2 0.18 11.8 0.0 2.1 2 0 0 2 2 2 0 Toprim domain AAA_10 PF12846.2 gi|452209273|ref|YP_007489387.1| - 0.042 13.2 0.2 0.13 11.6 0.1 1.7 1 1 0 1 1 1 0 AAA-like domain Zeta_toxin PF06414.7 gi|452209273|ref|YP_007489387.1| - 0.045 12.8 0.1 0.092 11.8 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin DUF853 PF05872.7 gi|452209273|ref|YP_007489387.1| - 0.058 11.7 0.0 0.088 11.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) NB-ARC PF00931.17 gi|452209273|ref|YP_007489387.1| - 0.064 12.0 0.1 0.11 11.3 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain PIF1 PF05970.9 gi|452209273|ref|YP_007489387.1| - 0.065 12.1 0.1 0.11 11.4 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase ArgK PF03308.11 gi|452209273|ref|YP_007489387.1| - 0.066 11.9 1.7 0.19 10.4 0.1 2.0 2 0 0 2 2 2 0 ArgK protein Helicase_RecD PF05127.9 gi|452209273|ref|YP_007489387.1| - 0.073 12.6 0.1 0.12 11.9 0.1 1.6 1 1 0 1 1 1 0 Helicase TrwB_AAD_bind PF10412.4 gi|452209273|ref|YP_007489387.1| - 0.094 11.3 0.4 0.18 10.3 0.3 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain KAP_NTPase PF07693.9 gi|452209273|ref|YP_007489387.1| - 0.097 11.6 0.0 0.16 10.9 0.0 1.2 1 1 0 1 1 1 0 KAP family P-loop domain RNA_helicase PF00910.17 gi|452209273|ref|YP_007489387.1| - 0.1 12.7 0.0 0.93 9.6 0.0 2.4 3 0 0 3 3 3 0 RNA helicase NACHT PF05729.7 gi|452209273|ref|YP_007489387.1| - 0.11 12.1 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Resolvase PF00239.16 gi|452209273|ref|YP_007489387.1| - 0.11 12.3 0.3 0.22 11.4 0.2 1.5 1 0 0 1 1 1 0 Resolvase, N terminal domain Sigma54_activat PF00158.21 gi|452209273|ref|YP_007489387.1| - 0.13 11.7 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain VirC1 PF07015.6 gi|452209273|ref|YP_007489387.1| - 0.13 11.3 0.9 3.1 6.8 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein PEPcase_2 PF14010.1 gi|452209273|ref|YP_007489387.1| - 0.14 10.4 0.8 0.18 10.0 0.5 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase AAA_25 PF13481.1 gi|452209273|ref|YP_007489387.1| - 0.44 9.9 4.0 1.4 8.2 2.0 2.6 1 1 1 2 2 2 0 AAA domain ATP-grasp_3 PF02655.9 gi|452209274|ref|YP_007489388.1| - 1.7e-53 180.7 0.0 2.2e-53 180.4 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|452209274|ref|YP_007489388.1| - 2.2e-21 76.4 0.0 3e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452209274|ref|YP_007489388.1| - 2.2e-15 56.2 0.0 5e-15 55.0 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 gi|452209274|ref|YP_007489388.1| - 1.5e-11 44.0 0.0 9.8e-11 41.3 0.0 2.1 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.8 gi|452209274|ref|YP_007489388.1| - 2.3e-08 33.6 0.0 0.00066 19.1 0.0 2.1 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|452209274|ref|YP_007489388.1| - 5e-08 32.6 0.0 1.1e-07 31.5 0.0 1.6 1 1 0 1 1 1 1 RimK-like ATP-grasp domain GARS_A PF01071.14 gi|452209274|ref|YP_007489388.1| - 0.00049 19.7 0.0 0.2 11.1 0.0 2.2 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.17 gi|452209274|ref|YP_007489388.1| - 0.002 17.4 0.0 0.011 15.0 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.1 gi|452209274|ref|YP_007489388.1| - 0.0036 16.4 0.0 0.011 14.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp TFIIE_alpha PF02002.12 gi|452209275|ref|YP_007489389.1| - 0.0002 20.7 0.1 0.00025 20.4 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit ACC_epsilon PF13822.1 gi|452209275|ref|YP_007489389.1| - 0.071 13.4 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit HTH_23 PF13384.1 gi|452209275|ref|YP_007489389.1| - 0.099 12.3 0.0 0.14 11.8 0.0 1.4 1 1 0 1 1 1 0 Homeodomain-like domain RepL PF05732.6 gi|452209275|ref|YP_007489389.1| - 0.11 11.6 0.1 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HD PF01966.17 gi|452209276|ref|YP_007489390.1| - 5.7e-16 58.6 2.2 9e-16 57.9 1.5 1.3 1 0 0 1 1 1 1 HD domain DUF4033 PF13225.1 gi|452209276|ref|YP_007489390.1| - 0.082 12.5 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Proteasome PF00227.21 gi|452209277|ref|YP_007489391.1| - 2.2e-55 186.9 1.1 2.4e-55 186.7 0.7 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.1 gi|452209277|ref|YP_007489391.1| - 0.036 13.1 0.0 0.052 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Beta-Casp PF10996.3 gi|452209278|ref|YP_007489392.1| - 1.5e-36 125.0 0.0 3.6e-36 123.8 0.0 1.7 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|452209278|ref|YP_007489392.1| - 1e-24 87.2 0.3 1.8e-24 86.4 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|452209278|ref|YP_007489392.1| - 9.2e-12 44.5 0.0 2.2e-11 43.3 0.0 1.7 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|452209278|ref|YP_007489392.1| - 8.5e-11 41.7 0.1 2.3e-10 40.3 0.1 1.8 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.12 gi|452209278|ref|YP_007489392.1| - 4e-06 26.2 2.6 2.5e-05 23.7 0.6 3.1 2 1 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.1 gi|452209278|ref|YP_007489392.1| - 1.1e-05 25.1 0.0 3.7e-05 23.4 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_1 PF00013.24 gi|452209278|ref|YP_007489392.1| - 0.0003 20.3 2.8 0.0029 17.2 0.5 2.5 2 0 0 2 2 2 1 KH domain KH_4 PF13083.1 gi|452209278|ref|YP_007489392.1| - 0.0032 17.0 0.0 0.0078 15.8 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|452209278|ref|YP_007489392.1| - 0.025 14.2 1.8 0.13 11.9 0.3 2.6 2 0 0 2 2 2 0 KH domain HAD_2 PF13419.1 gi|452209279|ref|YP_007489393.1| - 1e-25 90.9 0.0 1.2e-25 90.6 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452209279|ref|YP_007489393.1| - 1.5e-10 41.8 0.0 3.7e-09 37.3 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452209279|ref|YP_007489393.1| - 1.8e-05 24.3 0.0 3.7e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|452209279|ref|YP_007489393.1| - 0.00047 20.3 0.1 0.001 19.2 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.13 gi|452209279|ref|YP_007489393.1| - 0.0072 16.0 0.0 0.18 11.4 0.0 2.1 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase FtsZ_C PF12327.3 gi|452209280|ref|YP_007489394.1| - 8.1e-34 115.5 1.9 1.7e-33 114.5 0.1 2.4 3 1 0 3 3 3 1 FtsZ family, C-terminal domain Tubulin PF00091.20 gi|452209280|ref|YP_007489394.1| - 7.1e-33 114.2 0.5 2.9e-32 112.2 0.4 1.9 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain ThiF PF00899.16 gi|452209280|ref|YP_007489394.1| - 0.0079 16.0 0.0 0.055 13.2 0.0 2.1 2 0 0 2 2 2 1 ThiF family TrkA_N PF02254.13 gi|452209280|ref|YP_007489394.1| - 0.19 11.7 1.3 1.8 8.6 0.1 2.9 3 1 0 3 3 3 0 TrkA-N domain Pterin_bind PF00809.17 gi|452209281|ref|YP_007489395.1| - 3.4e-14 52.7 0.4 9.8e-13 47.9 0.3 2.7 1 1 0 1 1 1 1 Pterin binding enzyme DUF4346 PF14251.1 gi|452209281|ref|YP_007489395.1| - 4.9e-10 39.1 0.1 1.3e-09 37.7 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) CdhD PF03599.11 gi|452209281|ref|YP_007489395.1| - 1.4e-05 23.8 0.0 5.9e-05 21.7 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF561 PF04481.7 gi|452209281|ref|YP_007489395.1| - 0.039 12.8 0.1 0.064 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) EOS1 PF12326.3 gi|452209284|ref|YP_007489398.1| - 0.13 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 N-glycosylation protein H_PPase PF03030.11 gi|452209286|ref|YP_007489400.1| - 5.5e-262 870.9 58.2 6.2e-262 870.8 40.3 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase MFS_1 PF07690.11 gi|452209289|ref|YP_007489403.1| - 2.6e-34 118.4 38.8 9.6e-28 96.8 17.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|452209289|ref|YP_007489403.1| - 1.4e-09 37.1 10.2 1.4e-09 37.1 7.1 2.8 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.8 gi|452209289|ref|YP_007489403.1| - 0.00025 19.3 0.7 0.00025 19.3 0.5 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_1 PF07690.11 gi|452209290|ref|YP_007489404.1| - 6.6e-34 117.1 40.4 9.8e-26 90.2 6.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|452209290|ref|YP_007489404.1| - 1.2e-07 30.6 7.6 1.2e-07 30.6 5.3 2.2 2 1 0 2 2 2 1 Sugar (and other) transporter DUF1228 PF06779.9 gi|452209290|ref|YP_007489404.1| - 0.049 13.6 0.4 0.049 13.6 0.3 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1228) PUA PF01472.15 gi|452209291|ref|YP_007489405.1| - 1.5e-21 75.9 1.0 2.3e-21 75.2 0.7 1.3 1 0 0 1 1 1 1 PUA domain KH_2 PF07650.12 gi|452209291|ref|YP_007489405.1| - 0.00041 19.8 1.4 0.48 10.0 0.1 2.7 2 1 0 2 2 2 2 KH domain DUF552 PF04472.7 gi|452209292|ref|YP_007489406.1| - 6.2e-18 64.4 2.2 9.8e-18 63.8 1.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF552) Beta-lactamase2 PF13354.1 gi|452209292|ref|YP_007489406.1| - 0.096 12.1 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Beta-lactamase enzyme family zf-ZPR1 PF03367.8 gi|452209293|ref|YP_007489407.1| - 1.1e-44 151.4 0.1 1.4e-44 151.1 0.1 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain YdjO PF14169.1 gi|452209293|ref|YP_007489407.1| - 0.013 14.9 0.2 0.63 9.5 0.0 2.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Nse4-Nse3_bdg PF15412.1 gi|452209293|ref|YP_007489407.1| - 0.027 14.3 0.1 0.054 13.3 0.0 1.5 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE tRNA-synt_2b PF00587.20 gi|452209295|ref|YP_007489409.1| - 5.9e-21 74.8 0.1 1.3e-20 73.6 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|452209295|ref|YP_007489409.1| - 1.7e-20 72.7 1.0 2.6e-20 72.1 0.1 1.7 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.6 gi|452209295|ref|YP_007489409.1| - 8.4e-17 60.8 1.0 1.6e-16 59.9 0.1 1.9 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal UPF0150 PF03681.10 gi|452209295|ref|YP_007489409.1| - 0.022 14.3 0.6 0.064 12.8 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0150) DBI_PRT PF02277.12 gi|452209296|ref|YP_007489410.1| - 1.5e-23 83.4 1.3 2e-23 82.9 0.9 1.1 1 0 0 1 1 1 1 Phosphoribosyltransferase DUF3587 PF12132.3 gi|452209297|ref|YP_007489411.1| - 0.093 11.9 0.9 0.1 11.8 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) POTRA_1 PF08478.5 gi|452209297|ref|YP_007489411.1| - 0.13 12.2 0.6 0.21 11.6 0.4 1.3 1 1 0 1 1 1 0 POTRA domain, FtsQ-type HTH_12 PF08461.5 gi|452209297|ref|YP_007489411.1| - 1.5 8.6 3.8 3.9 7.2 0.4 2.1 1 1 1 2 2 2 0 Ribonuclease R winged-helix domain DUF1670 PF07900.6 gi|452209298|ref|YP_007489412.1| - 1.8e-84 282.4 0.4 2.1e-84 282.1 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) HTH_DeoR PF08220.7 gi|452209298|ref|YP_007489412.1| - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_29 PF13551.1 gi|452209298|ref|YP_007489412.1| - 0.00018 21.6 0.1 2.3 8.3 0.0 3.1 2 1 1 3 3 3 2 Winged helix-turn helix HTH_23 PF13384.1 gi|452209298|ref|YP_007489412.1| - 0.014 15.0 1.1 0.47 10.1 0.1 2.8 2 1 1 3 3 3 0 Homeodomain-like domain Sigma70_ECF PF07638.6 gi|452209298|ref|YP_007489412.1| - 0.1 12.2 0.0 5 6.7 0.0 2.4 2 1 0 2 2 2 0 ECF sigma factor HTH_28 PF13518.1 gi|452209298|ref|YP_007489412.1| - 0.17 11.9 0.5 15 5.7 0.0 3.1 2 1 1 3 3 3 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209298|ref|YP_007489412.1| - 0.28 10.8 2.0 0.43 10.2 0.1 2.2 2 0 0 2 2 2 0 HTH domain HTH_7 PF02796.10 gi|452209298|ref|YP_007489412.1| - 0.97 9.3 4.7 15 5.5 0.1 3.3 2 1 1 3 3 3 0 Helix-turn-helix domain of resolvase DUF1670 PF07900.6 gi|452209299|ref|YP_007489413.1| - 4.1e-94 313.9 0.8 4.9e-94 313.6 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) DeoC PF01791.4 gi|452209301|ref|YP_007489415.1| - 5e-53 179.8 0.0 6.1e-53 179.5 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PK PF00224.16 gi|452209302|ref|YP_007489416.1| - 1.8e-125 418.2 1.9 2.3e-125 417.8 1.3 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.11 gi|452209302|ref|YP_007489416.1| - 7.5e-24 83.5 0.0 2.3e-23 81.9 0.0 1.9 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.9 gi|452209302|ref|YP_007489416.1| - 2.6e-06 26.4 1.0 5.7e-06 25.3 0.7 1.6 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family CP_ATPgrasp_2 PF14403.1 gi|452209303|ref|YP_007489417.1| - 0.062 11.9 0.0 0.09 11.4 0.0 1.2 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 DAO PF01266.19 gi|452209305|ref|YP_007489419.1| - 5.2e-15 55.2 1.9 2.1e-07 30.1 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|452209305|ref|YP_007489419.1| - 2.9e-10 39.8 0.4 8.3e-10 38.3 0.3 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|452209305|ref|YP_007489419.1| - 9.1e-10 38.1 5.3 8.6e-05 21.7 0.0 2.4 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.9 gi|452209305|ref|YP_007489419.1| - 5.6e-09 34.9 1.4 1.8e-08 33.2 0.1 2.0 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.19 gi|452209305|ref|YP_007489419.1| - 1e-07 31.1 0.2 2.5e-07 29.9 0.2 1.6 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|452209305|ref|YP_007489419.1| - 1.7e-07 31.3 0.0 4.2e-07 30.0 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|452209305|ref|YP_007489419.1| - 1.8e-07 31.1 0.3 5.6e-07 29.4 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|452209305|ref|YP_007489419.1| - 1.1e-06 27.7 2.7 3.6e-06 26.0 1.9 1.8 1 1 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.7 gi|452209305|ref|YP_007489419.1| - 1.6e-06 27.2 0.9 0.00018 20.5 0.1 2.6 2 1 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.12 gi|452209305|ref|YP_007489419.1| - 2.1e-06 26.9 0.1 6.5e-06 25.4 0.0 1.8 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.9 gi|452209305|ref|YP_007489419.1| - 0.0002 20.1 0.5 0.036 12.6 0.2 2.2 1 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.1 gi|452209305|ref|YP_007489419.1| - 0.0011 19.0 0.1 0.0022 18.1 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|452209305|ref|YP_007489419.1| - 0.0023 18.2 0.9 0.081 13.3 0.0 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|452209305|ref|YP_007489419.1| - 0.0057 16.3 0.0 0.047 13.3 0.0 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.18 gi|452209305|ref|YP_007489419.1| - 0.074 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Fer4_NifH PF00142.13 gi|452209306|ref|YP_007489420.1| - 6e-129 429.0 1.2 6.7e-129 428.8 0.8 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|452209306|ref|YP_007489420.1| - 6e-10 38.8 0.4 2.3e-09 36.9 0.1 2.0 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|452209306|ref|YP_007489420.1| - 2.7e-06 26.6 0.2 4.9e-06 25.7 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|452209306|ref|YP_007489420.1| - 6.7e-06 26.1 0.0 1.3e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|452209306|ref|YP_007489420.1| - 0.00066 19.2 0.1 0.00096 18.6 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain YhjQ PF06564.7 gi|452209306|ref|YP_007489420.1| - 0.0009 18.6 0.0 0.11 11.8 0.0 2.1 2 0 0 2 2 2 1 YhjQ protein ArgK PF03308.11 gi|452209306|ref|YP_007489420.1| - 0.0013 17.5 0.4 0.0018 17.1 0.3 1.3 1 0 0 1 1 1 1 ArgK protein SRP54 PF00448.17 gi|452209306|ref|YP_007489420.1| - 0.0069 15.8 0.6 0.013 14.9 0.4 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MipZ PF09140.6 gi|452209306|ref|YP_007489420.1| - 0.009 15.1 0.4 0.041 12.9 0.1 1.9 2 0 0 2 2 2 1 ATPase MipZ RNA_helicase PF00910.17 gi|452209306|ref|YP_007489420.1| - 0.0099 16.0 0.2 0.032 14.4 0.1 1.9 2 0 0 2 2 2 1 RNA helicase AAA_25 PF13481.1 gi|452209306|ref|YP_007489420.1| - 0.01 15.2 0.1 0.021 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|452209306|ref|YP_007489420.1| - 0.021 14.3 0.2 0.032 13.7 0.1 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_16 PF13191.1 gi|452209306|ref|YP_007489420.1| - 0.024 14.6 0.0 0.056 13.4 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.12 gi|452209306|ref|YP_007489420.1| - 0.052 13.3 0.4 0.096 12.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|452209306|ref|YP_007489420.1| - 0.061 13.4 0.1 0.26 11.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.1 gi|452209306|ref|YP_007489420.1| - 0.084 12.4 0.7 0.15 11.6 0.1 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|452209306|ref|YP_007489420.1| - 0.14 10.9 0.4 0.22 10.3 0.3 1.3 1 0 0 1 1 1 0 NB-ARC domain ABC_tran PF00005.22 gi|452209306|ref|YP_007489420.1| - 0.15 12.3 0.6 0.23 11.7 0.1 1.5 2 0 0 2 2 1 0 ABC transporter P-II PF00543.17 gi|452209307|ref|YP_007489421.1| - 2.7e-32 111.2 0.8 3e-32 111.1 0.6 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II MEKHLA PF08670.6 gi|452209307|ref|YP_007489421.1| - 0.09 12.3 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 MEKHLA domain P-II PF00543.17 gi|452209308|ref|YP_007489422.1| - 1.1e-34 119.0 0.1 1.4e-34 118.5 0.0 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.14 gi|452209309|ref|YP_007489423.1| - 5.8e-148 492.7 0.3 8e-148 492.3 0.2 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Thioredoxin_6 PF13848.1 gi|452209309|ref|YP_007489423.1| - 0.041 13.6 0.1 0.18 11.6 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin-like domain Cob_adeno_trans PF01923.13 gi|452209309|ref|YP_007489423.1| - 0.048 13.4 0.1 0.3 10.8 0.0 2.1 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Oxidored_nitro PF00148.14 gi|452209310|ref|YP_007489424.1| - 2.3e-123 411.7 0.0 2.6e-123 411.5 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.14 gi|452209311|ref|YP_007489425.1| - 3.8e-53 180.5 0.1 4.3e-53 180.3 0.1 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase SBP_bac_11 PF13531.1 gi|452209312|ref|YP_007489426.1| - 9.9e-13 48.2 0.0 1.1e-12 48.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|452209312|ref|YP_007489426.1| - 3e-06 27.1 0.0 3.3e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.1 gi|452209312|ref|YP_007489426.1| - 6.2e-06 25.7 0.0 6.4e-06 25.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.1 gi|452209312|ref|YP_007489426.1| - 0.02 14.6 0.1 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein ABC_tran PF00005.22 gi|452209313|ref|YP_007489427.1| - 2.2e-14 53.9 0.0 4.2e-14 53.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.5 gi|452209313|ref|YP_007489427.1| - 1.3e-10 41.1 0.0 2.9e-10 39.9 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.1 gi|452209313|ref|YP_007489427.1| - 9.5e-09 35.6 0.0 1.6e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|452209313|ref|YP_007489427.1| - 0.029 14.2 0.5 0.32 10.9 0.4 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TOBE PF03459.12 gi|452209313|ref|YP_007489427.1| - 0.078 13.0 0.0 0.32 11.1 0.0 1.9 2 0 0 2 2 2 0 TOBE domain SMC_N PF02463.14 gi|452209313|ref|YP_007489427.1| - 0.19 10.9 0.0 0.38 9.9 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SBP_bac_3 PF00497.15 gi|452209314|ref|YP_007489428.1| - 2.2e-48 164.4 2.6 2.6e-25 89.0 0.4 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 Cache_2 PF08269.6 gi|452209314|ref|YP_007489428.1| - 9.6e-35 118.4 0.3 4.8e-14 52.0 0.0 4.0 3 0 0 3 3 3 3 Cache domain Methyltransf_31 PF13847.1 gi|452209315|ref|YP_007489429.1| - 2.9e-24 85.4 0.0 4.3e-24 84.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209315|ref|YP_007489429.1| - 3.5e-23 81.9 0.0 6e-23 81.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209315|ref|YP_007489429.1| - 3.3e-17 62.3 0.0 1.4e-16 60.3 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|452209315|ref|YP_007489429.1| - 2.9e-16 59.7 0.0 4.6e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209315|ref|YP_007489429.1| - 4.7e-16 58.9 0.0 1.1e-15 57.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209315|ref|YP_007489429.1| - 5.7e-15 55.8 0.0 1e-14 55.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209315|ref|YP_007489429.1| - 5.3e-14 52.4 0.0 1e-13 51.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452209315|ref|YP_007489429.1| - 2.3e-10 40.1 0.0 3.6e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|452209315|ref|YP_007489429.1| - 1.4e-09 37.3 0.0 4.7e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_26 PF13659.1 gi|452209315|ref|YP_007489429.1| - 1.5e-07 31.4 0.0 2.8e-07 30.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452209315|ref|YP_007489429.1| - 2.2e-05 23.6 0.0 3.4e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.1 gi|452209315|ref|YP_007489429.1| - 5.4e-05 22.8 0.0 8.6e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|452209315|ref|YP_007489429.1| - 0.00015 21.4 0.0 0.00095 18.8 0.0 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase FmrO PF07091.6 gi|452209315|ref|YP_007489429.1| - 0.00025 20.1 0.0 0.00036 19.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Methyltransf_9 PF08003.6 gi|452209315|ref|YP_007489429.1| - 0.00037 19.2 0.0 0.00053 18.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) UPF0020 PF01170.13 gi|452209315|ref|YP_007489429.1| - 0.00085 18.9 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|452209315|ref|YP_007489429.1| - 0.0013 17.9 0.0 0.0023 17.1 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.14 gi|452209315|ref|YP_007489429.1| - 0.0014 18.1 0.0 0.0023 17.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_29 PF03141.11 gi|452209315|ref|YP_007489429.1| - 0.0026 16.1 0.0 0.0035 15.7 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase RrnaAD PF00398.15 gi|452209315|ref|YP_007489429.1| - 0.15 11.1 0.0 0.22 10.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase UPF0066 PF01980.11 gi|452209315|ref|YP_007489429.1| - 0.15 12.0 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0066 P-II PF00543.17 gi|452209316|ref|YP_007489430.1| - 7.5e-33 113.0 0.2 8.4e-33 112.8 0.1 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.16 gi|452209317|ref|YP_007489431.1| - 1.8e-118 395.4 39.9 2.1e-118 395.2 27.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family CD99L2 PF12301.3 gi|452209317|ref|YP_007489431.1| - 0.065 12.9 0.5 0.13 11.9 0.3 1.5 1 0 0 1 1 1 0 CD99 antigen like protein 2 DUF2627 PF11118.3 gi|452209317|ref|YP_007489431.1| - 8.7 6.5 13.6 5.4 7.1 0.3 4.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2627) Wyosine_form PF08608.7 gi|452209318|ref|YP_007489432.1| - 0.019 15.0 0.1 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Wyosine base formation NUC130_3NT PF08158.7 gi|452209318|ref|YP_007489432.1| - 0.11 12.8 0.1 1.6 9.0 0.0 2.3 1 1 1 2 2 2 0 NUC130/3NT domain UPF0060 PF02694.10 gi|452209319|ref|YP_007489433.1| - 1.2e-12 47.7 0.8 1.4e-12 47.5 0.6 1.2 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family DUF3925 PF13063.1 gi|452209319|ref|YP_007489433.1| - 3.7 7.6 6.0 4.8 7.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3925) DUF318 PF03773.8 gi|452209320|ref|YP_007489434.1| - 3.2e-84 282.5 28.7 4.2e-84 282.1 19.9 1.1 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.1 gi|452209321|ref|YP_007489435.1| - 7.9e-31 105.6 1.5 8.7e-31 105.5 1.0 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|452209321|ref|YP_007489435.1| - 5.5e-05 23.0 0.3 9.3e-05 22.3 0.2 1.5 1 1 0 1 1 1 1 Glutaredoxin DUF150 PF02576.12 gi|452209321|ref|YP_007489435.1| - 0.047 13.2 0.0 0.06 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YhbC family COG0779 Thioredoxin_4 PF13462.1 gi|452209321|ref|YP_007489435.1| - 0.06 13.3 0.6 2 8.3 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin Ribosomal_S24e PF01282.14 gi|452209321|ref|YP_007489435.1| - 0.063 13.0 0.5 0.39 10.5 0.1 1.9 1 1 1 2 2 2 0 Ribosomal protein S24e Thioredoxin PF00085.15 gi|452209321|ref|YP_007489435.1| - 0.07 12.8 0.2 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin ArsD PF06953.6 gi|452209321|ref|YP_007489435.1| - 0.13 12.4 0.0 0.2 11.8 0.0 1.4 1 1 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD DGC PF08859.6 gi|452209322|ref|YP_007489436.1| - 2.3e-38 130.4 0.7 2.8e-38 130.1 0.5 1.1 1 0 0 1 1 1 1 DGC domain zf-IS66 PF13005.2 gi|452209323|ref|YP_007489437.1| - 8.3e-11 41.6 5.9 1.2e-10 41.1 4.1 1.3 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DUF331 PF03889.8 gi|452209323|ref|YP_007489437.1| - 0.033 13.4 0.0 0.07 12.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function NADase_NGA PF07461.6 gi|452209323|ref|YP_007489437.1| - 0.035 12.7 1.3 0.045 12.4 0.9 1.1 1 0 0 1 1 1 0 Nicotine adenine dinucleotide glycohydrolase (NADase) OrfB_Zn_ribbon PF07282.6 gi|452209323|ref|YP_007489437.1| - 0.22 11.2 3.1 1.1 8.9 0.1 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DZR PF12773.2 gi|452209323|ref|YP_007489437.1| - 0.25 11.1 5.9 0.24 11.2 3.1 1.7 2 1 0 2 2 2 0 Double zinc ribbon Mut7-C PF01927.11 gi|452209323|ref|YP_007489437.1| - 0.43 10.5 3.8 1.6 8.6 2.4 1.8 2 0 0 2 2 2 0 Mut7-C RNAse domain Lar_restr_allev PF14354.1 gi|452209323|ref|YP_007489437.1| - 0.48 10.7 6.2 2 8.7 0.8 2.4 2 1 0 2 2 2 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 gi|452209323|ref|YP_007489437.1| - 1.3 8.9 5.8 10 6.1 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|452209323|ref|YP_007489437.1| - 1.7 7.9 8.4 0.71 9.1 0.6 2.5 3 0 0 3 3 3 0 zinc-ribbon domain Usp PF00582.21 gi|452209325|ref|YP_007489439.1| - 6.8e-46 155.9 0.3 3.6e-24 85.5 0.0 2.1 2 0 0 2 2 2 2 Universal stress protein family ArsA_ATPase PF02374.10 gi|452209325|ref|YP_007489439.1| - 0.028 13.4 0.2 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase SBF PF01758.11 gi|452209326|ref|YP_007489440.1| - 3.3e-42 144.0 24.2 3.3e-42 144.0 16.8 2.4 3 0 0 3 3 3 2 Sodium Bile acid symporter family CMD PF02627.15 gi|452209327|ref|YP_007489441.1| - 5.3e-25 87.0 0.1 6.1e-25 86.8 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Methyltransf_12 PF08242.7 gi|452209329|ref|YP_007489443.1| - 5.6e-14 52.4 0.0 1.1e-13 51.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209329|ref|YP_007489443.1| - 2.6e-13 50.2 0.0 4.7e-13 49.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209329|ref|YP_007489443.1| - 8.5e-13 48.1 0.0 1.4e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209329|ref|YP_007489443.1| - 2.8e-12 47.2 0.1 4.8e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452209329|ref|YP_007489443.1| - 3.2e-12 46.1 0.1 1.1e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.1 gi|452209329|ref|YP_007489443.1| - 1.1e-11 44.6 0.0 1.7e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209329|ref|YP_007489443.1| - 2.4e-10 39.9 0.0 3.6e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|452209329|ref|YP_007489443.1| - 3.3e-09 36.9 0.0 7.4e-09 35.8 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain MTS PF05175.9 gi|452209329|ref|YP_007489443.1| - 3.5e-07 29.7 0.0 6.4e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|452209329|ref|YP_007489443.1| - 8.7e-06 25.0 0.0 1.1e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_26 PF13659.1 gi|452209329|ref|YP_007489443.1| - 0.0014 18.6 0.0 0.0033 17.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|452209329|ref|YP_007489443.1| - 0.0015 17.9 0.0 0.0022 17.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.14 gi|452209329|ref|YP_007489443.1| - 0.0016 18.0 0.0 0.0022 17.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|452209329|ref|YP_007489443.1| - 0.0016 17.5 0.0 0.0034 16.4 0.0 1.6 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_PK PF05891.7 gi|452209329|ref|YP_007489443.1| - 0.004 16.4 0.0 0.006 15.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Pox_MCEL PF03291.11 gi|452209329|ref|YP_007489443.1| - 0.0063 15.4 0.0 0.023 13.5 0.0 1.9 1 1 0 1 1 1 1 mRNA capping enzyme PrmA PF06325.8 gi|452209329|ref|YP_007489443.1| - 0.0084 15.2 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_2 PF00891.13 gi|452209329|ref|YP_007489443.1| - 0.037 13.2 0.0 0.11 11.6 0.0 1.7 1 1 0 1 1 1 0 O-methyltransferase TPMT PF05724.6 gi|452209329|ref|YP_007489443.1| - 0.055 12.8 0.0 0.089 12.2 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) tRNA_U5-meth_tr PF05958.6 gi|452209329|ref|YP_007489443.1| - 0.093 11.4 0.0 0.13 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CMD PF02627.15 gi|452209331|ref|YP_007489445.1| - 0.00037 20.2 0.1 0.00041 20.1 0.1 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Mis12 PF05859.7 gi|452209333|ref|YP_007489447.1| - 0.054 13.3 0.1 0.09 12.5 0.1 1.3 1 0 0 1 1 1 0 Mis12 protein SF-assemblin PF06705.6 gi|452209333|ref|YP_007489447.1| - 0.062 12.4 0.1 0.41 9.7 0.1 1.9 1 1 0 1 1 1 0 SF-assemblin/beta giardin DEAD PF00270.24 gi|452209335|ref|YP_007489449.1| - 6.9e-48 162.3 0.3 2.1e-47 160.7 0.0 1.9 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452209335|ref|YP_007489449.1| - 5.8e-29 99.7 0.0 1.5e-28 98.4 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DbpA PF03880.10 gi|452209335|ref|YP_007489449.1| - 5.5e-13 48.3 0.0 3.4e-12 45.8 0.0 2.4 2 0 0 2 2 2 1 DbpA RNA binding domain ResIII PF04851.10 gi|452209335|ref|YP_007489449.1| - 0.00013 21.8 0.0 0.00038 20.3 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.1 gi|452209335|ref|YP_007489449.1| - 0.0019 17.2 1.0 0.0032 16.5 0.0 1.8 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit AAA_30 PF13604.1 gi|452209335|ref|YP_007489449.1| - 0.0088 15.6 0.0 0.023 14.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain MHC_I_2 PF14586.1 gi|452209335|ref|YP_007489449.1| - 0.035 13.6 0.0 0.084 12.4 0.0 1.6 1 0 0 1 1 1 0 Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2 AAA_19 PF13245.1 gi|452209335|ref|YP_007489449.1| - 0.078 12.7 0.3 2.6 7.8 0.0 2.7 3 0 0 3 3 3 0 Part of AAA domain Methyltransf_12 PF08242.7 gi|452209336|ref|YP_007489450.1| - 2.1e-17 63.4 0.0 3.1e-17 62.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209336|ref|YP_007489450.1| - 1.9e-13 50.9 0.0 3e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209336|ref|YP_007489450.1| - 7.9e-12 45.4 0.0 1.6e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209336|ref|YP_007489450.1| - 8.6e-10 38.9 0.0 1.3e-09 38.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209336|ref|YP_007489450.1| - 2.2e-09 37.0 0.0 2.9e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209336|ref|YP_007489450.1| - 9.4e-08 31.9 0.0 1.2e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209336|ref|YP_007489450.1| - 2.9e-07 29.8 0.0 4.4e-07 29.2 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family ResIII PF04851.10 gi|452209336|ref|YP_007489450.1| - 5.7e-05 23.0 0.0 0.00012 22.0 0.0 1.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Methyltransf_26 PF13659.1 gi|452209336|ref|YP_007489450.1| - 0.013 15.5 0.0 0.028 14.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.14 gi|452209336|ref|YP_007489450.1| - 0.057 12.6 0.0 0.083 12.1 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family CMAS PF02353.15 gi|452209336|ref|YP_007489450.1| - 0.068 12.2 0.0 0.092 11.8 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|452209336|ref|YP_007489450.1| - 0.086 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain ADH_N PF08240.7 gi|452209337|ref|YP_007489451.1| - 4.7e-27 93.9 0.2 7.4e-27 93.2 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.1 gi|452209337|ref|YP_007489451.1| - 1.5e-12 46.9 0.3 2.6e-11 42.9 0.7 2.4 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated Hydantoinase_A PF01968.13 gi|452209338|ref|YP_007489452.1| - 4.5e-83 278.7 1.6 1.8e-82 276.7 0.1 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|452209338|ref|YP_007489452.1| - 2.9e-42 144.1 0.2 8.7e-40 136.0 0.0 2.7 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|452209338|ref|YP_007489452.1| - 6.1e-06 24.8 1.1 0.0048 15.2 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|452209338|ref|YP_007489452.1| - 0.082 12.1 1.0 0.28 10.4 0.0 2.3 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Metallophos_2 PF12850.2 gi|452209339|ref|YP_007489453.1| - 3.2e-20 72.5 0.0 4.2e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|452209339|ref|YP_007489453.1| - 0.00094 18.6 0.0 0.0017 17.7 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452209340|ref|YP_007489454.1| - 1.1e-26 93.5 0.1 1.2e-26 93.4 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|452209340|ref|YP_007489454.1| - 7.7e-06 25.4 0.8 0.00053 19.4 0.5 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|452209340|ref|YP_007489454.1| - 0.00066 18.9 0.2 0.44 9.6 0.1 2.1 2 0 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily QueC PF06508.8 gi|452209341|ref|YP_007489455.1| - 1e-59 201.3 0.0 1.2e-59 201.1 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|452209341|ref|YP_007489455.1| - 9.3e-05 21.9 0.0 0.0072 15.7 0.0 2.4 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.16 gi|452209341|ref|YP_007489455.1| - 0.00072 19.1 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.15 gi|452209341|ref|YP_007489455.1| - 0.0013 18.2 0.0 0.0044 16.5 0.0 1.8 2 0 0 2 2 2 1 PP-loop family Fer2 PF00111.22 gi|452209341|ref|YP_007489455.1| - 0.059 13.1 0.2 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain NAD_synthase PF02540.12 gi|452209341|ref|YP_007489455.1| - 0.064 12.1 0.1 0.11 11.3 0.0 1.4 2 0 0 2 2 2 0 NAD synthase tRNA_Me_trans PF03054.11 gi|452209341|ref|YP_007489455.1| - 0.12 10.9 0.1 0.47 8.9 0.0 1.8 2 0 0 2 2 2 0 tRNA methyl transferase DUF366 PF04017.7 gi|452209342|ref|YP_007489456.1| - 1.1e-74 249.7 0.5 1.2e-74 249.5 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) Tox-PL-2 PF15643.1 gi|452209342|ref|YP_007489456.1| - 0.0014 18.5 0.0 0.0022 17.9 0.0 1.4 1 0 0 1 1 1 1 Papain fold toxin 2 Fer4_14 PF13394.1 gi|452209343|ref|YP_007489457.1| - 4.2e-14 52.5 0.0 7.1e-14 51.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|452209343|ref|YP_007489457.1| - 2.4e-13 50.6 0.1 3.5e-13 50.0 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452209343|ref|YP_007489457.1| - 2.4e-08 34.1 0.0 3.3e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.14 gi|452209344|ref|YP_007489458.1| - 5.8e-29 100.2 0.0 6.9e-29 100.0 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.16 gi|452209345|ref|YP_007489459.1| - 1.5e-20 74.0 0.1 2.4e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|452209345|ref|YP_007489459.1| - 8.5e-06 25.7 0.2 2.6e-05 24.2 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452209345|ref|YP_007489459.1| - 0.00018 21.6 0.0 0.0004 20.5 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Rubella_E2 PF05749.6 gi|452209346|ref|YP_007489460.1| - 0.068 12.4 0.0 0.07 12.3 0.0 1.0 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Fer4 PF00037.22 gi|452209347|ref|YP_007489461.1| - 6.4e-19 66.7 19.7 7.6e-10 37.9 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209347|ref|YP_007489461.1| - 2.7e-15 55.8 24.0 7e-11 41.7 9.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209347|ref|YP_007489461.1| - 1.4e-14 53.1 19.6 1.1e-07 31.3 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209347|ref|YP_007489461.1| - 1.8e-13 49.5 18.2 1.3e-06 27.9 3.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452209347|ref|YP_007489461.1| - 5e-13 49.2 13.1 6.4e-13 48.8 9.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209347|ref|YP_007489461.1| - 4.2e-12 46.1 11.4 5e-12 45.9 7.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209347|ref|YP_007489461.1| - 2.1e-10 41.1 10.9 3.6e-05 24.4 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|452209347|ref|YP_007489461.1| - 5.1e-10 38.8 13.1 9e-05 22.4 2.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209347|ref|YP_007489461.1| - 2.3e-09 36.9 12.9 3.4e-09 36.4 9.0 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209347|ref|YP_007489461.1| - 4.7e-09 36.1 11.2 1.2e-08 34.8 7.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452209347|ref|YP_007489461.1| - 8e-07 29.5 19.0 0.00012 22.6 3.5 2.2 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452209347|ref|YP_007489461.1| - 1.2e-06 28.7 12.3 0.0033 17.7 1.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209347|ref|YP_007489461.1| - 3.2e-06 27.2 22.2 0.0014 18.9 5.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452209347|ref|YP_007489461.1| - 6.3e-06 26.4 18.2 0.0024 18.2 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|452209347|ref|YP_007489461.1| - 2.2e-05 24.7 17.3 0.0047 17.3 2.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209347|ref|YP_007489461.1| - 3.2e-05 23.7 5.2 3.2e-05 23.7 3.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452209347|ref|YP_007489461.1| - 0.14 12.0 7.5 0.22 11.3 5.2 1.5 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster DUF164 PF02591.10 gi|452209347|ref|YP_007489461.1| - 1.4 8.7 6.6 4.2 7.2 4.6 1.8 1 1 0 1 1 1 0 Putative zinc ribbon domain AIRS PF00586.19 gi|452209348|ref|YP_007489462.1| - 1.4e-19 70.1 1.4 3.3e-19 68.9 1.0 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|452209348|ref|YP_007489462.1| - 5.7e-15 55.6 0.0 1e-14 54.7 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain SH3_3 PF08239.6 gi|452209348|ref|YP_007489462.1| - 0.0099 16.0 0.2 15 5.8 0.0 3.2 3 0 0 3 3 3 2 Bacterial SH3 domain DUF98 PF01947.11 gi|452209351|ref|YP_007489465.1| - 5.6e-17 61.8 0.0 6.8e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF98) UTRA PF07702.8 gi|452209351|ref|YP_007489465.1| - 2.3e-06 27.2 0.1 3.2e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.8 gi|452209351|ref|YP_007489465.1| - 0.0026 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase TPR_2 PF07719.12 gi|452209352|ref|YP_007489466.1| - 8.4e-07 28.4 0.0 1.6e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452209352|ref|YP_007489466.1| - 1.9e-05 24.0 0.0 3.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452209352|ref|YP_007489466.1| - 0.00047 19.7 0.0 0.00093 18.8 0.0 1.4 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.1 gi|452209352|ref|YP_007489466.1| - 0.0021 17.7 0.0 0.0054 16.4 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|452209352|ref|YP_007489466.1| - 0.0021 17.2 0.0 0.004 16.3 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_12 PF13424.1 gi|452209352|ref|YP_007489466.1| - 0.0063 16.4 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat PQQ_2 PF13360.1 gi|452209352|ref|YP_007489466.1| - 0.044 13.2 0.0 0.058 12.8 0.0 1.2 1 0 0 1 1 1 0 PQQ-like domain TPR_16 PF13432.1 gi|452209352|ref|YP_007489466.1| - 0.063 13.9 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452209352|ref|YP_007489466.1| - 0.16 12.7 0.0 0.35 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat YkuD_2 PF13645.1 gi|452209352|ref|YP_007489466.1| - 0.16 11.1 1.2 1.5 8.0 0.0 2.4 1 1 0 2 2 2 0 L,D-transpeptidase catalytic domain zf-ribbon_3 PF13248.1 gi|452209354|ref|YP_007489468.1| - 0.0079 15.3 2.2 0.45 9.7 0.2 2.9 3 0 0 3 3 3 1 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|452209354|ref|YP_007489468.1| - 0.0083 15.7 3.5 1.4 8.6 0.2 3.0 3 0 0 3 3 3 2 Nudix N-terminal DZR PF12773.2 gi|452209354|ref|YP_007489468.1| - 0.015 15.0 2.4 0.015 15.0 1.7 2.8 1 1 1 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452209354|ref|YP_007489468.1| - 0.024 14.0 2.8 1.9 8.0 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf-dskA_traR PF01258.12 gi|452209354|ref|YP_007489468.1| - 0.051 13.3 12.1 5.8 6.7 0.0 4.2 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger DUF2175 PF09943.4 gi|452209354|ref|YP_007489468.1| - 0.069 13.2 3.2 0.3 11.1 0.2 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) zf-NADH-PPase PF09297.6 gi|452209354|ref|YP_007489468.1| - 0.094 12.2 2.1 0.22 11.0 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-CCHC_4 PF14392.1 gi|452209354|ref|YP_007489468.1| - 0.44 10.2 6.5 0.9 9.2 0.8 2.7 2 0 0 2 2 2 0 Zinc knuckle NOB1_Zn_bind PF08772.6 gi|452209354|ref|YP_007489468.1| - 0.47 10.3 6.5 2.2 8.1 0.0 2.8 3 0 0 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zf-RING_5 PF14634.1 gi|452209354|ref|YP_007489468.1| - 0.8 9.4 8.1 9.1 6.1 0.4 3.3 3 0 0 3 3 3 0 zinc-RING finger domain A2L_zn_ribbon PF08792.5 gi|452209354|ref|YP_007489468.1| - 2.3 7.7 12.0 3.4 7.2 0.1 3.9 4 0 0 4 4 4 0 A2L zinc ribbon domain FYVE PF01363.16 gi|452209354|ref|YP_007489468.1| - 2.5 8.0 5.4 18 5.2 3.7 2.3 1 1 0 1 1 1 0 FYVE zinc finger Cys_rich_CWC PF14375.1 gi|452209354|ref|YP_007489468.1| - 5.5 6.9 8.0 1.1 9.2 1.0 3.0 3 1 0 3 3 3 0 Cysteine-rich CWC ATPgrasp_TupA PF14305.1 gi|452209355|ref|YP_007489469.1| - 1e-98 329.4 0.7 1.2e-98 329.2 0.5 1.0 1 0 0 1 1 1 1 TupA-like ATPgrasp Metallophos_2 PF12850.2 gi|452209356|ref|YP_007489470.1| - 0.0022 17.8 0.0 0.0027 17.5 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain UPF0565 PF10561.4 gi|452209356|ref|YP_007489470.1| - 0.18 10.6 1.1 2.8 6.7 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0565 DHHA1 PF02272.14 gi|452209357|ref|YP_007489471.1| - 1.1e-05 25.0 0.0 2e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|452209357|ref|YP_007489471.1| - 0.089 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 DHH family DUF1699 PF08004.6 gi|452209358|ref|YP_007489472.1| - 2.5e-35 120.8 0.8 2.7e-35 120.7 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) ChaB PF06150.7 gi|452209359|ref|YP_007489473.1| - 1.6e-27 95.0 1.4 2e-27 94.7 1.0 1.1 1 0 0 1 1 1 1 ChaB Chorismate_synt PF01264.16 gi|452209359|ref|YP_007489473.1| - 0.018 13.5 0.0 0.02 13.3 0.0 1.0 1 0 0 1 1 1 0 Chorismate synthase Tombus_movement PF05318.7 gi|452209359|ref|YP_007489473.1| - 0.17 12.4 0.8 0.25 11.9 0.6 1.3 1 0 0 1 1 1 0 Tombusvirus movement protein DUF1699 PF08004.6 gi|452209360|ref|YP_007489474.1| - 5.6e-69 229.7 2.3 6.2e-69 229.5 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|452209360|ref|YP_007489474.1| - 0.048 13.9 0.2 0.085 13.1 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|452209360|ref|YP_007489474.1| - 0.086 12.3 0.2 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region Img2 PF05046.9 gi|452209360|ref|YP_007489474.1| - 0.12 12.6 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) DUF3674 PF12426.3 gi|452209361|ref|YP_007489475.1| - 0.0074 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 RNA dependent RNA polymerase Reo_sigmaC PF04582.7 gi|452209362|ref|YP_007489476.1| - 1.5e-10 40.7 15.7 5.4e-05 22.5 1.5 3.2 1 1 0 3 3 3 3 Reovirus sigma C capsid protein ATG16 PF08614.6 gi|452209362|ref|YP_007489476.1| - 3.3e-08 33.5 69.6 0.0063 16.3 4.5 5.7 1 1 4 5 5 5 4 Autophagy protein 16 (ATG16) Fib_alpha PF08702.5 gi|452209362|ref|YP_007489476.1| - 5.2e-07 29.8 44.4 0.0014 18.7 4.5 6.2 1 1 6 7 7 7 6 Fibrinogen alpha/beta chain family SlyX PF04102.7 gi|452209362|ref|YP_007489476.1| - 1.1e-05 25.6 48.7 0.012 15.9 1.7 7.2 1 1 4 7 7 7 4 SlyX AAA_13 PF13166.1 gi|452209362|ref|YP_007489476.1| - 0.00011 20.8 56.4 0.0018 16.8 17.4 3.1 1 1 2 3 3 3 2 AAA domain IncA PF04156.9 gi|452209362|ref|YP_007489476.1| - 0.00012 21.7 78.2 0.0046 16.5 14.0 4.1 1 1 2 3 3 3 1 IncA protein DUF641 PF04859.7 gi|452209362|ref|YP_007489476.1| - 0.00093 18.9 55.2 0.11 12.2 1.0 7.8 2 1 6 8 8 8 4 Plant protein of unknown function (DUF641) TPR_7 PF13176.1 gi|452209362|ref|YP_007489476.1| - 0.0045 16.6 0.6 0.17 11.7 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat HOOK PF05622.7 gi|452209362|ref|YP_007489476.1| - 0.063 11.0 64.1 0.066 11.0 19.6 3.6 1 1 3 4 4 4 0 HOOK protein Tropomyosin PF00261.15 gi|452209362|ref|YP_007489476.1| - 0.13 11.3 81.1 2.2 7.2 28.7 3.3 1 1 2 3 3 3 0 Tropomyosin Phage_GP20 PF06810.6 gi|452209362|ref|YP_007489476.1| - 0.36 10.2 60.9 0.24 10.8 6.2 5.9 1 1 5 6 6 6 0 Phage minor structural protein GP20 ERM PF00769.14 gi|452209362|ref|YP_007489476.1| - 0.36 10.3 71.3 0.083 12.4 15.9 4.0 1 1 3 4 4 4 0 Ezrin/radixin/moesin family Nsp1_C PF05064.8 gi|452209362|ref|YP_007489476.1| - 0.38 10.4 44.3 0.53 9.9 2.5 5.2 1 1 5 6 6 6 0 Nsp1-like C-terminal region CENP-F_leu_zip PF10473.4 gi|452209362|ref|YP_007489476.1| - 0.45 10.3 83.9 0.46 10.3 14.1 4.8 1 1 4 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.6 gi|452209362|ref|YP_007489476.1| - 0.53 8.8 71.0 0.049 12.2 11.6 4.2 1 1 5 6 6 6 0 Spc7 kinetochore protein Mod_r PF07200.8 gi|452209362|ref|YP_007489476.1| - 1.1 9.2 54.9 2.2 8.1 2.3 4.8 1 1 4 5 5 5 0 Modifier of rudimentary (Mod(r)) protein Rnk_N PF14760.1 gi|452209362|ref|YP_007489476.1| - 1.3 9.1 7.1 16 5.6 0.0 3.8 3 0 0 3 3 3 0 Rnk N-terminus DUF4201 PF13870.1 gi|452209362|ref|YP_007489476.1| - 1.4 8.3 64.4 0.056 12.8 6.7 5.4 1 1 3 5 5 5 0 Domain of unknown function (DUF4201) Lebercilin PF15619.1 gi|452209362|ref|YP_007489476.1| - 3.3 7.0 64.9 0.16 11.3 17.9 3.9 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.4 gi|452209362|ref|YP_007489476.1| - 5.7 7.1 48.7 0.19 11.8 5.5 5.7 2 2 4 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF228 PF02989.9 gi|452209362|ref|YP_007489476.1| - 6.3 6.3 12.4 0.77 9.2 1.2 3.6 3 1 0 3 3 3 0 Lyme disease proteins of unknown function DUF4446 PF14584.1 gi|452209362|ref|YP_007489476.1| - 7.5 6.3 43.7 0.31 10.8 0.4 6.2 1 1 6 7 7 7 0 Protein of unknown function (DUF4446) Tropomyosin_1 PF12718.2 gi|452209362|ref|YP_007489476.1| - 8.5 6.2 79.8 5 6.9 13.2 5.2 1 1 3 4 4 3 0 Tropomyosin like DUF1699 PF08004.6 gi|452209363|ref|YP_007489477.1| - 2.1e-51 172.8 0.1 2.4e-51 172.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Sua5_yciO_yrdC PF01300.13 gi|452209364|ref|YP_007489478.1| - 8.9e-45 152.1 0.0 1.6e-44 151.2 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.7 gi|452209364|ref|YP_007489478.1| - 1e-32 111.1 17.9 1.8e-17 62.4 3.6 2.4 2 0 0 2 2 2 2 HypF finger Acylphosphatase PF00708.13 gi|452209364|ref|YP_007489478.1| - 2.6e-23 81.9 0.0 6.3e-23 80.6 0.0 1.7 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.20 gi|452209364|ref|YP_007489478.1| - 0.016 14.7 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family DUF4379 PF14311.1 gi|452209364|ref|YP_007489478.1| - 0.58 10.0 4.3 1.5 8.6 3.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4379) FYDLN_acid PF09538.5 gi|452209364|ref|YP_007489478.1| - 0.74 10.4 2.6 0.4 11.2 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Cys_rich_KTR PF14205.1 gi|452209364|ref|YP_007489478.1| - 1.7 8.1 6.6 1.4 8.4 1.2 2.6 2 0 0 2 2 2 0 Cysteine-rich KTR ATP-synt_D PF01813.12 gi|452209365|ref|YP_007489479.1| - 3.1e-64 216.1 7.2 3.5e-64 215.9 5.0 1.0 1 0 0 1 1 1 1 ATP synthase subunit D PP_kinase_C PF13090.1 gi|452209365|ref|YP_007489479.1| - 0.015 13.9 0.1 0.02 13.4 0.1 1.3 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain Ead_Ea22 PF13935.1 gi|452209365|ref|YP_007489479.1| - 0.059 13.6 0.8 0.1 12.9 0.1 1.7 1 1 1 2 2 2 0 Ead/Ea22-like protein Syntaxin_2 PF14523.1 gi|452209365|ref|YP_007489479.1| - 0.1 12.6 1.5 2.2 8.3 0.1 2.2 2 0 0 2 2 2 0 Syntaxin-like protein ATP-synt_ab PF00006.20 gi|452209366|ref|YP_007489480.1| - 1.1e-59 201.5 0.0 1.4e-59 201.2 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|452209366|ref|YP_007489480.1| - 8.4e-17 61.6 0.0 1.5e-16 60.8 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|452209366|ref|YP_007489480.1| - 4.5e-13 49.2 2.2 4.5e-13 49.2 1.5 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|452209366|ref|YP_007489480.1| - 1.7e-05 24.6 0.6 4.7e-05 23.2 0.4 1.8 1 0 0 1 1 1 1 HAS barrel domain DUF561 PF04481.7 gi|452209366|ref|YP_007489480.1| - 0.014 14.3 0.0 0.023 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP-synt_ab PF00006.20 gi|452209367|ref|YP_007489481.1| - 6.1e-97 323.3 0.0 9.3e-97 322.7 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|452209367|ref|YP_007489481.1| - 1.3e-20 73.9 1.0 2.7e-20 72.9 0.7 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|452209367|ref|YP_007489481.1| - 1.5e-07 31.5 0.6 8.2e-07 29.1 0.3 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.1 gi|452209367|ref|YP_007489481.1| - 0.0026 17.4 0.2 0.0065 16.1 0.1 1.6 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain DUF1932 PF09130.6 gi|452209367|ref|YP_007489481.1| - 0.1 12.3 1.9 1.5 8.6 0.2 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1932) ATP-synt_F PF01990.12 gi|452209368|ref|YP_007489482.1| - 2e-15 56.9 0.0 2.2e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit SOCS PF12610.3 gi|452209368|ref|YP_007489482.1| - 0.14 12.4 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Suppressor of cytokine signalling vATP-synt_AC39 PF01992.11 gi|452209369|ref|YP_007489483.1| - 2e-110 369.1 7.1 2.5e-110 368.7 4.9 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.13 gi|452209369|ref|YP_007489483.1| - 4.7e-09 35.8 0.0 1.2e-08 34.4 0.0 1.7 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit DUF4391 PF14335.1 gi|452209369|ref|YP_007489483.1| - 0.037 13.4 0.2 0.066 12.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) ATP-synt_C PF00137.16 gi|452209370|ref|YP_007489484.1| - 3.1e-17 62.2 10.9 3.7e-17 61.9 7.6 1.1 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.12 gi|452209370|ref|YP_007489484.1| - 0.011 15.1 0.5 0.012 15.0 0.3 1.2 1 0 0 1 1 1 0 Competence-damaged protein TraT PF05818.7 gi|452209370|ref|YP_007489484.1| - 0.36 10.2 4.1 0.38 10.1 2.8 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein V_ATPase_I PF01496.14 gi|452209371|ref|YP_007489485.1| - 1.1e-148 496.3 8.3 6.1e-114 381.5 1.1 2.2 1 1 0 2 2 2 2 V-type ATPase 116kDa subunit family MerR-DNA-bind PF09278.6 gi|452209371|ref|YP_007489485.1| - 0.0076 16.6 0.9 5.2 7.5 0.1 3.5 3 0 0 3 3 3 1 MerR, DNA binding Vps51 PF08700.6 gi|452209371|ref|YP_007489485.1| - 0.027 14.3 1.8 1 9.2 0.1 2.7 2 1 0 2 2 2 0 Vps51/Vps67 FimP PF09766.4 gi|452209371|ref|YP_007489485.1| - 0.043 12.8 0.3 0.075 12.0 0.2 1.3 1 0 0 1 1 1 0 Fms-interacting protein Spc7 PF08317.6 gi|452209371|ref|YP_007489485.1| - 0.071 11.7 3.6 0.022 13.4 0.4 1.6 2 0 0 2 2 2 0 Spc7 kinetochore protein Cortex-I_coil PF09304.5 gi|452209371|ref|YP_007489485.1| - 0.091 12.8 3.4 2.5 8.1 0.0 2.3 2 0 0 2 2 2 0 Cortexillin I, coiled coil DivIC PF04977.10 gi|452209371|ref|YP_007489485.1| - 0.19 11.2 4.6 5.5 6.5 1.1 2.7 2 0 0 2 2 2 0 Septum formation initiator DUF4140 PF13600.1 gi|452209371|ref|YP_007489485.1| - 0.33 11.4 1.5 1.2 9.5 0.3 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF3972 PF13118.1 gi|452209371|ref|YP_007489485.1| - 0.42 10.6 3.5 0.55 10.3 0.8 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3972) DUF904 PF06005.7 gi|452209371|ref|YP_007489485.1| - 0.45 10.8 5.5 2.3 8.5 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF904) TMF_DNA_bd PF12329.3 gi|452209371|ref|YP_007489485.1| - 0.54 10.0 6.8 0.5 10.2 1.6 2.6 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Fib_alpha PF08702.5 gi|452209371|ref|YP_007489485.1| - 1.3 9.1 3.2 7.4 6.6 0.5 2.2 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF4200 PF13863.1 gi|452209371|ref|YP_007489485.1| - 4.3 7.3 6.4 2.2 8.2 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Prefoldin_2 PF01920.15 gi|452209371|ref|YP_007489485.1| - 6.3 6.6 7.5 5.7 6.7 1.4 2.6 3 0 0 3 3 3 0 Prefoldin subunit V-ATPase_G PF03179.10 gi|452209372|ref|YP_007489486.1| - 8.8e-05 22.7 14.8 0.00011 22.4 10.3 1.2 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.13 gi|452209372|ref|YP_007489486.1| - 0.00025 20.8 20.0 0.0019 17.9 9.2 2.0 1 1 1 2 2 2 2 ATP synthase B/B' CF(0) DUF2259 PF10016.4 gi|452209372|ref|YP_007489486.1| - 0.052 13.2 0.3 0.06 13.0 0.2 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) HrpE PF06188.7 gi|452209372|ref|YP_007489486.1| - 0.12 12.0 5.4 0.18 11.5 3.7 1.3 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E DUF3043 PF11241.3 gi|452209372|ref|YP_007489486.1| - 0.21 11.1 2.2 0.29 10.6 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF883 PF05957.8 gi|452209372|ref|YP_007489486.1| - 6.9 7.1 8.1 9.5 6.7 4.1 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF4398 PF14346.1 gi|452209372|ref|YP_007489486.1| - 7.1 6.7 12.4 2.4 8.2 5.5 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4398) Radical_SAM PF04055.16 gi|452209373|ref|YP_007489487.1| - 4.2e-17 62.8 0.0 7.7e-17 61.9 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.1 gi|452209373|ref|YP_007489487.1| - 2.4e-09 37.4 0.1 6.3e-09 36.0 0.1 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|452209373|ref|YP_007489487.1| - 0.042 13.9 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain polyprenyl_synt PF00348.12 gi|452209374|ref|YP_007489488.1| - 6.6e-45 152.9 0.0 8.5e-45 152.6 0.0 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase CcmE PF03100.10 gi|452209375|ref|YP_007489489.1| - 1.5e-10 40.7 0.0 1.8e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 CcmE tRNA_anti-like PF12869.2 gi|452209375|ref|YP_007489489.1| - 0.04 13.3 0.1 0.11 11.9 0.0 1.7 1 1 1 2 2 2 0 tRNA_anti-like Lactamase_B PF00753.22 gi|452209376|ref|YP_007489490.1| - 9e-09 35.2 0.0 1.1e-07 31.7 0.1 2.2 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily ACT PF01842.20 gi|452209376|ref|YP_007489490.1| - 7.3e-07 28.5 0.0 8.4e-06 25.1 0.0 2.5 2 0 0 2 2 2 1 ACT domain Thr_dehydrat_C PF00585.13 gi|452209376|ref|YP_007489490.1| - 1.4e-05 24.6 0.0 0.085 12.4 0.0 2.6 1 1 1 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase ACT_4 PF13291.1 gi|452209376|ref|YP_007489490.1| - 0.0077 16.5 0.0 7.5 6.9 0.0 2.5 2 0 0 2 2 2 2 ACT domain Lactamase_B_2 PF12706.2 gi|452209376|ref|YP_007489490.1| - 0.016 14.7 0.0 0.025 14.1 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain TetR_C_5 PF08360.6 gi|452209376|ref|YP_007489490.1| - 0.017 15.0 0.1 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 QacR-like protein, C-terminal region DUF123 PF01986.11 gi|452209377|ref|YP_007489491.1| - 7.8e-29 99.7 0.0 9.6e-29 99.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 ADP_ribosyl_GH PF03747.9 gi|452209378|ref|YP_007489492.1| - 3.8e-65 220.5 0.2 4.4e-65 220.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Inhibitor_I42 PF09394.5 gi|452209379|ref|YP_007489493.1| - 9.4e-19 67.5 0.0 1.5e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Hexapep_2 PF14602.1 gi|452209379|ref|YP_007489493.1| - 0.1 12.1 1.6 0.21 11.1 0.1 2.2 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase Inhibitor_I71 PF12628.2 gi|452209379|ref|YP_007489493.1| - 0.15 11.6 2.1 1.6 8.4 0.2 2.6 1 1 2 3 3 3 0 Falstatin, cysteine peptidase inhibitor Phage_int_SAM_3 PF14659.1 gi|452209381|ref|YP_007489495.1| - 0.13 12.5 0.5 0.13 12.5 0.4 2.1 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain AAA PF00004.24 gi|452209382|ref|YP_007489496.1| - 3.5e-43 146.9 0.0 7.8e-43 145.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|452209382|ref|YP_007489496.1| - 7.5e-06 25.7 0.1 2.3e-05 24.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|452209382|ref|YP_007489496.1| - 1.7e-05 24.9 0.1 0.00013 21.9 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|452209382|ref|YP_007489496.1| - 3.1e-05 24.1 0.1 0.0013 18.8 0.1 2.5 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|452209382|ref|YP_007489496.1| - 8e-05 21.7 0.0 0.00019 20.5 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_19 PF13245.1 gi|452209382|ref|YP_007489496.1| - 0.00016 21.3 0.1 0.00042 19.9 0.1 1.7 1 0 0 1 1 1 1 Part of AAA domain AAA_2 PF07724.9 gi|452209382|ref|YP_007489496.1| - 0.00017 21.5 0.0 0.00038 20.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.1 gi|452209382|ref|YP_007489496.1| - 0.00051 19.9 0.0 0.0011 18.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452209382|ref|YP_007489496.1| - 0.0013 19.5 0.1 0.0033 18.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain Leu_zip PF15294.1 gi|452209382|ref|YP_007489496.1| - 0.0015 17.6 0.8 0.0024 17.0 0.5 1.2 1 0 0 1 1 1 1 Leucine zipper IstB_IS21 PF01695.12 gi|452209382|ref|YP_007489496.1| - 0.0028 17.1 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein KaiC PF06745.8 gi|452209382|ref|YP_007489496.1| - 0.0046 16.1 0.0 0.029 13.4 0.0 2.2 1 1 1 2 2 2 1 KaiC AAA_3 PF07726.6 gi|452209382|ref|YP_007489496.1| - 0.0049 16.4 0.0 0.011 15.3 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.6 gi|452209382|ref|YP_007489496.1| - 0.005 16.7 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 Torsin Sigma54_activ_2 PF14532.1 gi|452209382|ref|YP_007489496.1| - 0.0058 16.6 0.0 0.024 14.6 0.0 2.0 2 0 0 2 2 2 1 Sigma-54 interaction domain CPT PF07931.7 gi|452209382|ref|YP_007489496.1| - 0.0058 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein RNA_helicase PF00910.17 gi|452209382|ref|YP_007489496.1| - 0.0059 16.7 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA_33 PF13671.1 gi|452209382|ref|YP_007489496.1| - 0.0065 16.3 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.21 gi|452209382|ref|YP_007489496.1| - 0.0073 15.8 0.1 0.043 13.2 0.0 2.2 3 0 0 3 3 3 1 Sigma-54 interaction domain TIP49 PF06068.8 gi|452209382|ref|YP_007489496.1| - 0.0075 15.0 0.1 0.014 14.1 0.0 1.3 1 0 0 1 1 1 1 TIP49 C-terminus AAA_18 PF13238.1 gi|452209382|ref|YP_007489496.1| - 0.013 15.8 0.0 0.032 14.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|452209382|ref|YP_007489496.1| - 0.016 14.1 0.0 0.025 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.1 gi|452209382|ref|YP_007489496.1| - 0.033 14.1 0.0 0.065 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|452209382|ref|YP_007489496.1| - 0.034 13.2 0.0 0.066 12.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Viral_helicase1 PF01443.13 gi|452209382|ref|YP_007489496.1| - 0.042 13.3 0.0 0.07 12.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Mg_chelatase PF01078.16 gi|452209382|ref|YP_007489496.1| - 0.044 12.9 0.1 0.1 11.7 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF815 PF05673.8 gi|452209382|ref|YP_007489496.1| - 0.048 12.5 0.0 0.092 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NACHT PF05729.7 gi|452209382|ref|YP_007489496.1| - 0.052 13.2 0.3 0.18 11.4 0.1 1.9 1 1 1 2 2 2 0 NACHT domain AAA_25 PF13481.1 gi|452209382|ref|YP_007489496.1| - 0.055 12.8 0.6 0.15 11.4 0.2 2.0 2 1 0 2 2 2 0 AAA domain Lum_binding PF00677.12 gi|452209382|ref|YP_007489496.1| - 0.071 13.0 0.1 0.16 11.9 0.1 1.6 1 0 0 1 1 1 0 Lumazine binding domain NTPase_1 PF03266.10 gi|452209382|ref|YP_007489496.1| - 0.085 12.5 0.1 0.28 10.8 0.1 1.8 1 1 0 1 1 1 0 NTPase PhoH PF02562.11 gi|452209382|ref|YP_007489496.1| - 0.092 11.9 0.2 0.38 9.9 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein ADK PF00406.17 gi|452209382|ref|YP_007489496.1| - 0.16 11.8 0.7 3.2 7.6 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase Parvo_NS1 PF01057.12 gi|452209382|ref|YP_007489496.1| - 0.18 10.6 0.0 0.31 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF131 PF01998.12 gi|452209384|ref|YP_007489498.1| - 1.4e-16 59.5 3.4 1.6e-16 59.4 2.3 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF131 DUF131 PF01998.12 gi|452209385|ref|YP_007489499.1| - 5.6e-23 80.0 9.9 5.7e-23 80.0 4.0 2.4 1 1 0 1 1 1 1 Protein of unknown function DUF131 TctB PF07331.6 gi|452209385|ref|YP_007489499.1| - 0.004 16.7 0.3 1.5 8.4 0.2 2.1 2 0 0 2 2 2 2 Tripartite tricarboxylate transporter TctB family DUF4097 PF13349.1 gi|452209385|ref|YP_007489499.1| - 0.011 15.2 0.0 0.011 15.2 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) DUF3784 PF12650.2 gi|452209385|ref|YP_007489499.1| - 0.036 13.9 1.0 5.4 7.0 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) IncA PF04156.9 gi|452209385|ref|YP_007489499.1| - 0.079 12.5 0.8 3.3 7.2 0.0 2.1 2 0 0 2 2 2 0 IncA protein Baculo_11_kDa PF06143.6 gi|452209385|ref|YP_007489499.1| - 0.095 12.0 1.3 0.34 10.3 0.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family Tetraspannin PF00335.15 gi|452209385|ref|YP_007489499.1| - 0.1 11.8 2.0 0.56 9.4 1.4 1.8 1 1 0 1 1 1 0 Tetraspanin family DUF3040 PF11239.3 gi|452209385|ref|YP_007489499.1| - 0.28 11.2 3.0 11 6.2 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF3955 PF13127.1 gi|452209385|ref|YP_007489499.1| - 1.4 8.4 11.7 0.16 11.5 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3955) SdpI PF13630.1 gi|452209385|ref|YP_007489499.1| - 8.3 6.2 14.6 2.5 7.8 1.2 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Adenylsucc_synt PF00709.16 gi|452209386|ref|YP_007489500.1| - 7.2e-162 538.8 0.0 8.1e-162 538.6 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_S19e PF01090.14 gi|452209387|ref|YP_007489501.1| - 1.5e-56 189.7 0.0 1.7e-56 189.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.8 gi|452209387|ref|YP_007489501.1| - 0.011 15.3 0.0 4.9 6.8 0.0 2.6 3 0 0 3 3 3 0 Holliday junction DNA helicase ruvB C-terminus HTH_27 PF13463.1 gi|452209387|ref|YP_007489501.1| - 0.061 13.6 0.0 0.28 11.5 0.0 2.1 1 1 0 1 1 1 0 Winged helix DNA-binding domain dsDNA_bind PF01984.15 gi|452209388|ref|YP_007489502.1| - 4e-30 103.9 18.6 4.4e-30 103.8 12.9 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain 4HB_MCP_1 PF12729.2 gi|452209388|ref|YP_007489502.1| - 0.05 12.9 0.7 0.18 11.1 0.1 1.8 1 1 1 2 2 2 0 Four helix bundle sensory module for signal transduction Caps_synth_GfcC PF06251.6 gi|452209388|ref|YP_007489502.1| - 4.8 6.2 7.6 6.2 5.9 5.3 1.2 1 0 0 1 1 1 0 Capsule biosynthesis GfcC Asn_synthase PF00733.16 gi|452209389|ref|YP_007489503.1| - 0.00041 19.9 0.0 0.0007 19.1 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|452209389|ref|YP_007489503.1| - 0.013 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ATP_bind_4 PF01902.12 gi|452209389|ref|YP_007489503.1| - 0.028 13.7 0.0 0.086 12.1 0.0 1.7 2 0 0 2 2 2 0 ATP-binding region tRNA_Me_trans PF03054.11 gi|452209389|ref|YP_007489503.1| - 0.047 12.2 0.0 0.083 11.4 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase Ribosomal_L39 PF00832.15 gi|452209390|ref|YP_007489504.1| - 2.8e-21 74.7 7.7 3e-21 74.5 5.3 1.0 1 0 0 1 1 1 1 Ribosomal L39 protein PGAMP PF07644.6 gi|452209390|ref|YP_007489504.1| - 0.02 14.6 0.2 0.031 14.0 0.1 1.3 1 0 0 1 1 1 0 Planctomycete PGAMP DUF4100 PF13352.1 gi|452209390|ref|YP_007489504.1| - 0.16 11.3 0.3 0.17 11.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) Ribosomal_L31e PF01198.14 gi|452209391|ref|YP_007489505.1| - 7.4e-28 96.0 0.3 8.7e-28 95.8 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.13 gi|452209392|ref|YP_007489506.1| - 8.5e-65 217.5 1.1 9.9e-65 217.3 0.8 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L18ae PF01775.12 gi|452209393|ref|YP_007489507.1| - 1.3e-11 44.4 0.4 1.4e-11 44.3 0.3 1.0 1 0 0 1 1 1 1 Ribosomal L18ae/LX protein domain SelR PF01641.13 gi|452209393|ref|YP_007489507.1| - 0.048 13.3 0.2 0.048 13.3 0.1 1.1 1 0 0 1 1 1 0 SelR domain Prefoldin PF02996.12 gi|452209394|ref|YP_007489508.1| - 3.8e-30 104.0 1.5 5.2e-30 103.5 1.0 1.2 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|452209394|ref|YP_007489508.1| - 1.5e-06 27.9 5.3 0.00039 20.1 0.3 2.1 2 0 0 2 2 2 2 Prefoldin subunit MIF4G_like_2 PF09090.6 gi|452209394|ref|YP_007489508.1| - 0.00084 18.6 0.2 0.001 18.3 0.1 1.1 1 0 0 1 1 1 1 MIF4G like Peptidase_M13_N PF05649.8 gi|452209394|ref|YP_007489508.1| - 0.0017 17.4 0.1 0.002 17.2 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M13 Effector_1 PF04518.7 gi|452209394|ref|YP_007489508.1| - 0.0022 17.0 4.1 0.32 9.9 0.6 2.0 2 0 0 2 2 2 2 Effector from type III secretion system DUF342 PF03961.8 gi|452209394|ref|YP_007489508.1| - 0.0031 15.9 0.9 0.45 8.8 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF342) CENP-F_leu_zip PF10473.4 gi|452209394|ref|YP_007489508.1| - 0.0048 16.7 6.3 0.058 13.2 0.4 2.1 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4140 PF13600.1 gi|452209394|ref|YP_007489508.1| - 0.0072 16.7 8.2 0.14 12.6 0.6 2.3 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) DegS PF05384.6 gi|452209394|ref|YP_007489508.1| - 0.0088 15.2 1.8 0.43 9.7 0.1 2.1 2 0 0 2 2 2 1 Sensor protein DegS Tropomyosin_1 PF12718.2 gi|452209394|ref|YP_007489508.1| - 0.0089 15.8 5.4 0.34 10.7 0.2 2.1 2 0 0 2 2 2 1 Tropomyosin like Spc7 PF08317.6 gi|452209394|ref|YP_007489508.1| - 0.01 14.5 4.4 0.66 8.5 0.1 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1664 PF07889.7 gi|452209394|ref|YP_007489508.1| - 0.012 15.4 0.5 1.5 8.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4200 PF13863.1 gi|452209394|ref|YP_007489508.1| - 0.013 15.4 9.8 0.25 11.3 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) IncA PF04156.9 gi|452209394|ref|YP_007489508.1| - 0.019 14.5 4.9 1.3 8.5 1.0 2.0 2 0 0 2 2 2 0 IncA protein Nup54 PF13874.1 gi|452209394|ref|YP_007489508.1| - 0.019 14.6 5.7 0.5 10.0 0.2 2.3 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 Baculo_PEP_C PF04513.7 gi|452209394|ref|YP_007489508.1| - 0.019 14.7 1.6 2.6 7.8 0.1 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus PMEI PF04043.10 gi|452209394|ref|YP_007489508.1| - 0.022 14.6 0.6 0.032 14.1 0.4 1.3 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Sec3_C_2 PF15278.1 gi|452209394|ref|YP_007489508.1| - 0.027 14.5 0.6 8.5 6.5 0.0 2.2 2 0 0 2 2 2 0 Sec3 exocyst complex subunit XRCC4 PF06632.7 gi|452209394|ref|YP_007489508.1| - 0.033 13.0 1.3 0.28 10.0 0.0 2.0 1 1 1 2 2 2 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Myc-LZ PF02344.10 gi|452209394|ref|YP_007489508.1| - 0.053 13.1 0.2 0.2 11.2 0.0 1.9 2 0 0 2 2 1 0 Myc leucine zipper domain DUF3450 PF11932.3 gi|452209394|ref|YP_007489508.1| - 0.054 12.7 6.9 0.52 9.5 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Fib_alpha PF08702.5 gi|452209394|ref|YP_007489508.1| - 0.063 13.3 1.0 11 6.1 0.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF972 PF06156.8 gi|452209394|ref|YP_007489508.1| - 0.064 13.6 2.1 8.5 6.7 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF972) RasGAP_C PF03836.10 gi|452209394|ref|YP_007489508.1| - 0.067 12.8 1.1 5.3 6.7 0.0 2.1 2 0 0 2 2 2 0 RasGAP C-terminus RmuC PF02646.11 gi|452209394|ref|YP_007489508.1| - 0.069 11.9 6.3 0.26 10.0 0.3 2.0 2 0 0 2 2 2 0 RmuC family DUF3287 PF11690.3 gi|452209394|ref|YP_007489508.1| - 0.076 13.0 0.5 3.9 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) STAT_alpha PF01017.15 gi|452209394|ref|YP_007489508.1| - 0.08 12.6 2.5 0.7 9.5 0.1 2.1 2 0 0 2 2 2 0 STAT protein, all-alpha domain CDC37_N PF03234.9 gi|452209394|ref|YP_007489508.1| - 0.082 13.2 1.6 0.14 12.5 1.1 1.3 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding GAS PF13851.1 gi|452209394|ref|YP_007489508.1| - 0.089 11.9 4.6 1.5 8.0 0.3 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF148 PF02520.12 gi|452209394|ref|YP_007489508.1| - 0.09 12.5 7.3 0.63 9.8 1.1 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 Seryl_tRNA_N PF02403.17 gi|452209394|ref|YP_007489508.1| - 0.1 12.6 6.8 1.3 9.0 0.8 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain TBPIP PF07106.8 gi|452209394|ref|YP_007489508.1| - 0.11 12.0 3.8 1.8 8.0 0.2 2.1 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) COG2 PF06148.6 gi|452209394|ref|YP_007489508.1| - 0.11 12.4 2.5 1.3 8.9 0.4 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 YqjK PF13997.1 gi|452209394|ref|YP_007489508.1| - 0.11 12.7 1.3 0.47 10.6 0.1 2.5 2 2 0 2 2 2 0 YqjK-like protein DUF948 PF06103.6 gi|452209394|ref|YP_007489508.1| - 0.11 12.3 1.3 0.77 9.6 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin PF00804.20 gi|452209394|ref|YP_007489508.1| - 0.12 12.5 3.9 1.4 9.1 2.7 2.1 1 1 0 1 1 1 0 Syntaxin NPV_P10 PF05531.7 gi|452209394|ref|YP_007489508.1| - 0.13 12.5 0.8 8.3 6.7 0.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein WXG100 PF06013.7 gi|452209394|ref|YP_007489508.1| - 0.14 12.1 9.3 0.45 10.5 0.6 2.4 2 1 0 2 2 2 0 Proteins of 100 residues with WXG EzrA PF06160.7 gi|452209394|ref|YP_007489508.1| - 0.15 10.1 3.4 1.5 6.8 0.6 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA DivIVA PF05103.8 gi|452209394|ref|YP_007489508.1| - 0.17 11.9 6.6 0.94 9.5 0.7 2.1 2 0 0 2 2 2 0 DivIVA protein PspA_IM30 PF04012.7 gi|452209394|ref|YP_007489508.1| - 0.17 11.2 9.6 1.7 7.9 2.2 2.1 2 0 0 2 2 2 0 PspA/IM30 family Helicase_IV_N PF12462.3 gi|452209394|ref|YP_007489508.1| - 0.21 11.2 1.7 1.8 8.2 0.0 2.1 2 0 0 2 2 2 0 DNA helicase IV / RNA helicase N terminal Nsp1_C PF05064.8 gi|452209394|ref|YP_007489508.1| - 0.22 11.1 2.2 4.6 6.9 0.2 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region DUF2458 PF10454.4 gi|452209394|ref|YP_007489508.1| - 0.23 11.3 4.2 0.35 10.7 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2458) MAD PF05557.8 gi|452209394|ref|YP_007489508.1| - 0.24 9.4 3.9 0.42 8.6 0.3 1.9 2 0 0 2 2 2 0 Mitotic checkpoint protein Hemerythrin PF01814.18 gi|452209394|ref|YP_007489508.1| - 0.24 11.5 2.1 2.3 8.3 1.5 2.0 1 1 0 1 1 1 0 Hemerythrin HHE cation binding domain HlyD PF00529.15 gi|452209394|ref|YP_007489508.1| - 0.24 10.6 5.7 0.32 10.2 4.0 1.2 1 0 0 1 1 1 0 HlyD family secretion protein DUF2968 PF11180.3 gi|452209394|ref|YP_007489508.1| - 0.25 10.7 6.8 0.85 8.9 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) AAA_13 PF13166.1 gi|452209394|ref|YP_007489508.1| - 0.25 9.7 5.0 1.6 7.0 0.6 2.0 2 0 0 2 2 2 0 AAA domain Cortex-I_coil PF09304.5 gi|452209394|ref|YP_007489508.1| - 0.27 11.3 5.2 2.1 8.4 0.2 2.2 2 0 0 2 2 2 0 Cortexillin I, coiled coil Laminin_II PF06009.7 gi|452209394|ref|YP_007489508.1| - 0.29 10.8 4.1 4.7 6.9 0.3 2.2 2 0 0 2 2 2 0 Laminin Domain II Synaptobrevin PF00957.16 gi|452209394|ref|YP_007489508.1| - 0.3 10.7 3.6 0.66 9.6 0.1 2.2 2 0 0 2 2 2 0 Synaptobrevin DUF2317 PF10079.4 gi|452209394|ref|YP_007489508.1| - 0.31 9.6 4.4 0.29 9.6 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2317) CHDCT2 PF08074.6 gi|452209394|ref|YP_007489508.1| - 0.33 10.6 2.0 0.52 10.0 0.2 1.8 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain BLOC1_2 PF10046.4 gi|452209394|ref|YP_007489508.1| - 0.33 11.1 6.0 2.3 8.3 0.4 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MCPsignal PF00015.16 gi|452209394|ref|YP_007489508.1| - 0.34 10.4 12.7 0.78 9.2 8.8 1.7 1 1 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Bacillus_HBL PF05791.6 gi|452209394|ref|YP_007489508.1| - 0.36 10.1 4.0 4.2 6.6 0.4 2.1 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Mnd1 PF03962.10 gi|452209394|ref|YP_007489508.1| - 0.36 10.4 4.1 3.2 7.3 0.3 2.1 2 0 0 2 2 2 0 Mnd1 family ADIP PF11559.3 gi|452209394|ref|YP_007489508.1| - 0.37 10.6 7.4 1.6 8.6 0.7 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Laminin_I PF06008.9 gi|452209394|ref|YP_007489508.1| - 0.44 9.8 7.8 2.4 7.4 1.1 2.1 2 0 0 2 2 2 0 Laminin Domain I EMP24_GP25L PF01105.19 gi|452209394|ref|YP_007489508.1| - 0.51 10.0 2.6 1.2 8.7 0.0 2.0 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Tropomyosin PF00261.15 gi|452209394|ref|YP_007489508.1| - 0.62 9.1 8.8 0.52 9.3 0.2 2.1 2 0 0 2 2 2 0 Tropomyosin NTR2 PF15458.1 gi|452209394|ref|YP_007489508.1| - 0.81 8.8 8.2 0.76 8.9 0.8 2.1 2 0 0 2 2 2 0 Nineteen complex-related protein 2 Reo_sigmaC PF04582.7 gi|452209394|ref|YP_007489508.1| - 0.82 8.7 3.2 8.7 5.4 0.2 2.0 1 1 0 2 2 2 0 Reovirus sigma C capsid protein APG6 PF04111.7 gi|452209394|ref|YP_007489508.1| - 0.83 8.6 6.6 3.2 6.7 0.2 2.1 2 0 0 2 2 2 0 Autophagy protein Apg6 DUF4515 PF14988.1 gi|452209394|ref|YP_007489508.1| - 0.94 9.1 8.0 6.5 6.3 5.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4515) Vps51 PF08700.6 gi|452209394|ref|YP_007489508.1| - 0.97 9.3 3.9 16 5.4 0.3 2.8 2 1 0 2 2 2 0 Vps51/Vps67 AAA_27 PF13514.1 gi|452209394|ref|YP_007489508.1| - 1 6.9 10.1 3.8 5.0 7.0 1.6 1 1 0 1 1 1 0 AAA domain bZIP_1 PF00170.16 gi|452209394|ref|YP_007489508.1| - 1.2 9.1 5.3 3.6 7.6 0.1 2.5 2 1 0 2 2 2 0 bZIP transcription factor DUF2203 PF09969.4 gi|452209394|ref|YP_007489508.1| - 1.2 9.3 3.5 20 5.4 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) HAUS-augmin3 PF14932.1 gi|452209394|ref|YP_007489508.1| - 1.4 8.0 6.5 2.4 7.2 0.2 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 LXG PF04740.7 gi|452209394|ref|YP_007489508.1| - 1.4 8.6 5.3 4.9 6.8 0.3 2.1 2 0 0 2 2 2 0 LXG domain of WXG superfamily Flagellin_N PF00669.15 gi|452209394|ref|YP_007489508.1| - 1.8 8.3 8.8 1.9 8.2 2.2 2.2 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region M_domain PF12938.2 gi|452209394|ref|YP_007489508.1| - 1.8 8.3 5.9 1 9.1 1.2 1.9 1 1 0 2 2 2 0 M domain of GW182 TMF_DNA_bd PF12329.3 gi|452209394|ref|YP_007489508.1| - 2.2 8.1 8.9 7.4 6.4 0.3 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF607 PF04678.8 gi|452209394|ref|YP_007489508.1| - 2.3 8.1 6.6 4.9 7.0 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function, DUF607 MscS_porin PF12795.2 gi|452209394|ref|YP_007489508.1| - 2.3 7.4 11.8 1.8 7.8 2.3 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain bZIP_Maf PF03131.12 gi|452209394|ref|YP_007489508.1| - 2.4 8.5 5.9 12 6.2 0.3 2.2 2 0 0 2 2 2 0 bZIP Maf transcription factor HAUS6_N PF14661.1 gi|452209394|ref|YP_007489508.1| - 3.8 6.7 6.5 6.3 6.0 1.3 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF2580 PF10824.3 gi|452209394|ref|YP_007489508.1| - 5.5 7.4 9.2 16 5.8 1.6 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF2580) DUF3584 PF12128.3 gi|452209394|ref|YP_007489508.1| - 6.3 3.9 9.6 56 0.8 6.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Adeno_PIX PF03955.9 gi|452209394|ref|YP_007489508.1| - 7.3 7.1 7.5 11 6.5 1.4 2.3 1 1 1 2 2 2 0 Adenovirus hexon-associated protein (IX) DUF812 PF05667.6 gi|452209394|ref|YP_007489508.1| - 8.7 4.7 10.7 5.3 5.4 1.6 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF812) PspC PF04024.7 gi|452209396|ref|YP_007489510.1| - 1e-27 95.3 1.1 1.1e-27 95.2 0.8 1.1 1 0 0 1 1 1 1 PspC domain DUF539 PF04400.8 gi|452209396|ref|YP_007489510.1| - 0.025 14.0 0.2 0.038 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF539) DUF11 PF01345.13 gi|452209397|ref|YP_007489511.1| - 0.27 11.3 3.2 0.5 10.4 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF11 AhpC-TSA PF00578.16 gi|452209398|ref|YP_007489512.1| - 8.5e-35 119.1 0.1 1.2e-34 118.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.4 gi|452209398|ref|YP_007489512.1| - 2.4e-16 59.0 1.1 1e-15 57.0 0.3 2.1 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.5 gi|452209398|ref|YP_007489512.1| - 1.5e-14 53.7 0.0 2e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin DUF4511 PF14974.1 gi|452209398|ref|YP_007489512.1| - 0.0068 16.1 0.3 0.015 15.0 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4511) KAT11 PF08214.6 gi|452209398|ref|YP_007489512.1| - 0.11 11.5 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Histone acetylation protein DDE_Tnp_IS66 PF03050.9 gi|452209399|ref|YP_007489513.1| - 1.7e-58 198.0 0.2 1.9e-58 197.8 0.1 1.0 1 0 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.1 gi|452209399|ref|YP_007489513.1| - 1.1e-05 25.4 3.7 0.14 12.1 0.1 3.2 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|452209399|ref|YP_007489513.1| - 0.011 15.2 0.3 0.018 14.5 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Takusan PF04822.8 gi|452209399|ref|YP_007489513.1| - 0.15 11.8 3.6 0.088 12.5 0.8 1.8 1 1 0 2 2 2 0 Takusan RBD-FIP PF09457.5 gi|452209399|ref|YP_007489513.1| - 0.5 10.2 3.2 4 7.3 1.8 2.8 2 1 0 2 2 2 0 FIP domain P5CR_dimer PF14748.1 gi|452209400|ref|YP_007489514.1| - 8.6e-42 141.5 2.0 8.6e-42 141.5 1.4 1.9 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.12 gi|452209400|ref|YP_007489514.1| - 1e-20 73.9 2.1 3.4e-20 72.2 0.4 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|452209400|ref|YP_007489514.1| - 5.2e-07 29.5 4.6 6.4e-06 25.9 3.0 2.3 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|452209400|ref|YP_007489514.1| - 7.3e-06 25.9 0.5 1.7e-05 24.6 0.3 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase PDH PF02153.12 gi|452209400|ref|YP_007489514.1| - 0.0073 15.2 0.0 0.014 14.3 0.0 1.4 1 0 0 1 1 1 1 Prephenate dehydrogenase DapB_N PF01113.15 gi|452209400|ref|YP_007489514.1| - 0.077 12.9 0.1 0.22 11.4 0.1 1.8 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.11 gi|452209400|ref|YP_007489514.1| - 0.11 11.9 1.7 0.26 10.7 1.2 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.9 gi|452209400|ref|YP_007489514.1| - 0.34 10.2 2.6 2.3 7.5 0.7 2.7 1 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA_kinase PF00696.23 gi|452209401|ref|YP_007489515.1| - 2.5e-35 122.1 0.1 3.2e-35 121.8 0.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.15 gi|452209401|ref|YP_007489515.1| - 1.1e-19 69.9 0.7 1.1e-19 69.9 0.5 1.9 2 0 0 2 2 2 1 PUA domain Aldedh PF00171.17 gi|452209402|ref|YP_007489516.1| - 3.5e-16 58.6 0.0 2.7e-12 45.7 0.0 2.3 2 0 0 2 2 2 2 Aldehyde dehydrogenase family Toprim_4 PF13662.1 gi|452209404|ref|YP_007489518.1| - 2.1e-06 27.6 0.0 8.6e-06 25.6 0.0 1.9 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|452209404|ref|YP_007489518.1| - 9.4e-06 25.5 0.2 0.00026 20.9 0.1 2.4 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 gi|452209404|ref|YP_007489518.1| - 0.0099 16.1 0.0 0.018 15.3 0.0 1.5 1 1 0 1 1 1 1 Toprim-like DUF3529 PF12046.3 gi|452209404|ref|YP_007489518.1| - 0.033 13.2 0.2 0.072 12.1 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3529) DUF167 PF02594.11 gi|452209405|ref|YP_007489519.1| - 2.6e-22 78.5 0.0 3.1e-22 78.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Phosphoprotein PF00922.12 gi|452209405|ref|YP_007489519.1| - 0.075 12.2 0.1 0.085 12.0 0.1 1.1 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein Amidohydro_1 PF01979.15 gi|452209406|ref|YP_007489520.1| - 5.4e-14 52.5 0.2 1.1e-12 48.2 0.1 2.0 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.17 gi|452209406|ref|YP_007489520.1| - 2.1e-08 33.4 0.0 3.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_4 PF13147.1 gi|452209406|ref|YP_007489520.1| - 1.1e-07 32.2 0.0 6.8e-07 29.5 0.0 1.9 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|452209406|ref|YP_007489520.1| - 5.8e-05 22.8 0.0 0.00011 21.9 0.0 1.5 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|452209406|ref|YP_007489520.1| - 0.00026 20.3 0.0 0.0034 16.6 0.0 2.2 2 0 0 2 2 2 1 Amidohydrolase family Peripla_BP_2 PF01497.13 gi|452209406|ref|YP_007489520.1| - 0.0068 15.5 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Usp PF00582.21 gi|452209407|ref|YP_007489521.1| - 2.4e-39 134.7 0.2 2.7e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF1693 PF07984.7 gi|452209407|ref|YP_007489521.1| - 0.14 11.2 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1693) CBS PF00571.23 gi|452209408|ref|YP_007489522.1| - 3e-48 161.3 10.9 1.1e-15 57.0 0.1 4.1 4 0 0 4 4 4 4 CBS domain H_kinase_N PF12282.3 gi|452209408|ref|YP_007489522.1| - 0.014 15.0 1.2 2.7 7.6 0.0 2.9 2 1 1 3 3 3 0 Signal transduction histidine kinase GAF_2 PF13185.1 gi|452209408|ref|YP_007489522.1| - 0.081 13.4 0.6 1.4 9.4 0.0 2.5 2 1 1 3 3 3 0 GAF domain Peptidase_S55 PF05580.7 gi|452209408|ref|YP_007489522.1| - 0.12 11.8 0.2 1.8 7.9 0.0 2.4 2 1 0 2 2 2 0 SpoIVB peptidase S55 Cache_3 PF14827.1 gi|452209408|ref|YP_007489522.1| - 0.9 9.4 3.4 38 4.2 0.1 3.4 3 1 1 4 4 4 0 Sensory domain of two-component sensor kinase CxxCxxCC PF03692.10 gi|452209409|ref|YP_007489523.1| - 6.7e-12 45.7 2.1 1.8e-11 44.3 1.4 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain KOW PF00467.24 gi|452209410|ref|YP_007489524.1| - 3.8e-05 23.2 0.1 6.6e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 KOW motif ACTH_domain PF00976.13 gi|452209410|ref|YP_007489524.1| - 1.5 8.6 4.2 11 6.0 0.8 2.1 2 0 0 2 2 2 0 Corticotropin ACTH domain CRCB PF02537.10 gi|452209411|ref|YP_007489525.1| - 6e-26 90.6 8.5 6.8e-26 90.4 5.9 1.0 1 0 0 1 1 1 1 CrcB-like protein MFS_1 PF07690.11 gi|452209411|ref|YP_007489525.1| - 0.083 11.5 6.9 0.11 11.1 4.8 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily SCAMP PF04144.8 gi|452209411|ref|YP_007489525.1| - 0.16 11.8 1.6 0.18 11.6 1.1 1.1 1 0 0 1 1 1 0 SCAMP family CRCB PF02537.10 gi|452209412|ref|YP_007489526.1| - 5e-23 81.2 12.6 5.8e-23 81.0 8.7 1.0 1 0 0 1 1 1 1 CrcB-like protein MoeA_N PF03453.12 gi|452209413|ref|YP_007489527.1| - 2.1e-45 153.9 0.1 4.3e-45 152.9 0.0 1.5 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|452209413|ref|YP_007489527.1| - 8.7e-30 103.0 0.0 1.5e-29 102.2 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|452209413|ref|YP_007489527.1| - 8.1e-13 48.1 2.8 3.9e-12 45.9 0.0 2.7 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) MutL PF13941.1 gi|452209413|ref|YP_007489527.1| - 0.028 12.7 0.0 0.043 12.1 0.0 1.2 1 0 0 1 1 1 0 MutL protein ThiS PF02597.15 gi|452209414|ref|YP_007489528.1| - 1.6e-19 70.0 0.1 1.9e-19 69.8 0.0 1.1 1 0 0 1 1 1 1 ThiS family Colicin_Pyocin PF01320.13 gi|452209414|ref|YP_007489528.1| - 0.083 12.7 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein Cut8_M PF14483.1 gi|452209414|ref|YP_007489528.1| - 0.094 12.5 0.3 1.1 9.1 0.0 2.1 2 0 0 2 2 2 0 Cut8 dimerisation domain PMT_2 PF13231.1 gi|452209415|ref|YP_007489529.1| - 1.1e-12 48.0 11.0 1.1e-12 48.0 7.6 4.3 3 1 2 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase STT3 PF02516.9 gi|452209415|ref|YP_007489529.1| - 0.4 9.5 28.3 3.1 6.6 19.5 2.1 1 1 1 2 2 2 0 Oligosaccharyl transferase STT3 subunit CBS PF00571.23 gi|452209416|ref|YP_007489530.1| - 5.8e-06 25.9 0.1 8.4e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 CBS domain Na_H_Exchanger PF00999.16 gi|452209417|ref|YP_007489531.1| - 5.8e-52 176.4 52.8 6.5e-52 176.3 36.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family E1-E2_ATPase PF00122.15 gi|452209418|ref|YP_007489532.1| - 2.5e-74 249.2 0.1 2.5e-74 249.2 0.1 2.2 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|452209418|ref|YP_007489532.1| - 2.6e-44 150.9 9.8 2.6e-44 150.9 6.8 2.8 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|452209418|ref|YP_007489532.1| - 1.4e-39 136.7 0.0 5e-39 134.9 0.0 2.0 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|452209418|ref|YP_007489532.1| - 8.8e-24 83.2 0.0 2.8e-23 81.6 0.0 1.9 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Cation_ATPase_N PF00690.21 gi|452209418|ref|YP_007489532.1| - 1.6e-20 72.2 0.0 3.8e-20 71.1 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|452209418|ref|YP_007489532.1| - 8.3e-18 65.2 0.0 1.8e-17 64.1 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|452209418|ref|YP_007489532.1| - 1.9e-05 24.3 1.2 0.0056 16.2 0.6 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.16 gi|452209418|ref|YP_007489532.1| - 0.043 14.0 0.2 0.31 11.2 0.1 2.4 1 1 0 1 1 1 0 Radical SAM superfamily Amino_oxidase PF01593.19 gi|452209419|ref|YP_007489533.1| - 1.1e-19 70.9 0.0 1.1e-18 67.5 0.0 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 gi|452209419|ref|YP_007489533.1| - 9.2e-12 44.8 0.1 4.1e-11 42.7 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|452209419|ref|YP_007489533.1| - 1.7e-11 43.6 0.0 2.4e-06 26.7 0.0 2.6 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|452209419|ref|YP_007489533.1| - 8.6e-07 28.1 0.0 0.0002 20.3 0.0 2.5 3 0 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.9 gi|452209419|ref|YP_007489533.1| - 0.00027 20.8 0.0 0.0049 16.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|452209419|ref|YP_007489533.1| - 0.00031 19.3 0.0 0.31 9.4 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein Thi4 PF01946.12 gi|452209419|ref|YP_007489533.1| - 0.0018 17.4 0.9 0.0081 15.2 0.1 2.2 2 0 0 2 2 2 1 Thi4 family Lycopene_cycl PF05834.7 gi|452209419|ref|YP_007489533.1| - 0.027 13.3 0.0 3.5 6.4 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein GIDA PF01134.17 gi|452209419|ref|YP_007489533.1| - 0.029 13.2 0.0 0.12 11.2 0.0 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|452209419|ref|YP_007489533.1| - 0.034 14.5 0.2 7.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|452209419|ref|YP_007489533.1| - 0.064 13.2 0.0 0.24 11.4 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|452209419|ref|YP_007489533.1| - 0.13 12.0 0.1 0.43 10.3 0.0 1.9 2 0 0 2 2 2 0 FAD-NAD(P)-binding DUF3303 PF11746.3 gi|452209420|ref|YP_007489534.1| - 6.8e-08 32.7 0.0 7.1e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) Herpes_IE1 PF07340.6 gi|452209420|ref|YP_007489534.1| - 0.006 15.0 0.0 0.0072 14.8 0.0 1.0 1 0 0 1 1 1 1 Cytomegalovirus IE1 protein Aldedh PF00171.17 gi|452209421|ref|YP_007489535.1| - 3.4e-166 553.1 0.0 4.1e-166 552.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|452209421|ref|YP_007489535.1| - 0.002 16.9 0.0 0.0043 15.8 0.0 1.5 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF2298 PF10060.4 gi|452209423|ref|YP_007489537.1| - 1.7e-145 485.4 46.3 2.4e-145 485.0 32.1 1.2 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) UPF0104 PF03706.8 gi|452209424|ref|YP_007489538.1| - 1.4e-21 77.0 8.5 1.8e-21 76.7 5.9 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) CRA PF06589.6 gi|452209424|ref|YP_007489538.1| - 0.0077 15.5 0.3 0.013 14.8 0.2 1.4 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) HTH_5 PF01022.15 gi|452209425|ref|YP_007489539.1| - 1.2e-15 56.8 1.2 2.1e-15 56.0 0.8 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452209425|ref|YP_007489539.1| - 1.2e-13 50.6 0.8 2.1e-13 49.8 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2513 PF10711.4 gi|452209425|ref|YP_007489539.1| - 0.002 18.1 0.0 0.0032 17.5 0.0 1.4 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.1 gi|452209425|ref|YP_007489539.1| - 0.0035 17.1 0.0 0.0052 16.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|452209425|ref|YP_007489539.1| - 0.0045 17.2 0.0 0.0095 16.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|452209425|ref|YP_007489539.1| - 0.0072 16.3 0.1 0.011 15.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452209425|ref|YP_007489539.1| - 0.0075 15.9 0.2 0.016 14.8 0.1 1.6 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452209425|ref|YP_007489539.1| - 0.017 14.4 0.0 0.16 11.3 0.0 2.2 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|452209425|ref|YP_007489539.1| - 0.045 13.5 0.1 0.096 12.4 0.1 1.7 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family ArsR PF09824.4 gi|452209425|ref|YP_007489539.1| - 0.047 13.0 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator FAM74 PF15026.1 gi|452209425|ref|YP_007489539.1| - 0.092 12.3 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 FAM74 protein Mrr_N PF14338.1 gi|452209425|ref|YP_007489539.1| - 0.14 12.2 0.0 0.36 10.9 0.0 1.7 1 0 0 1 1 1 0 Mrr N-terminal domain NikR_C PF08753.6 gi|452209426|ref|YP_007489540.1| - 7.3e-35 118.7 2.4 9.6e-35 118.3 1.7 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|452209426|ref|YP_007489540.1| - 3.1e-08 33.1 0.1 3.1e-08 33.1 0.0 2.3 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family AMP-binding PF00501.23 gi|452209427|ref|YP_007489541.1| - 2.5e-20 72.2 0.0 3.4e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.1 gi|452209427|ref|YP_007489541.1| - 0.14 11.9 0.0 0.98 9.1 0.0 2.0 1 1 1 2 2 2 0 SIS domain CMD PF02627.15 gi|452209429|ref|YP_007489543.1| - 6.8e-20 70.6 0.1 8.2e-20 70.4 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF1144 PF06610.8 gi|452209429|ref|YP_007489543.1| - 0.028 14.1 0.5 0.23 11.2 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1144) TrmB PF01978.14 gi|452209430|ref|YP_007489544.1| - 1.7e-05 24.3 0.0 0.079 12.6 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|452209430|ref|YP_007489544.1| - 0.00026 20.7 0.0 0.021 14.6 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|452209430|ref|YP_007489544.1| - 0.00077 19.5 0.0 0.023 14.7 0.0 2.1 2 0 0 2 2 2 1 Penicillinase repressor LIM PF00412.17 gi|452209430|ref|YP_007489544.1| - 0.0015 18.5 1.0 0.0028 17.6 0.7 1.4 1 0 0 1 1 1 1 LIM domain PadR PF03551.9 gi|452209430|ref|YP_007489544.1| - 0.0058 16.3 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_IclR PF09339.5 gi|452209430|ref|YP_007489544.1| - 0.0076 15.8 0.0 0.021 14.4 0.0 1.9 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|452209430|ref|YP_007489544.1| - 0.0082 15.5 0.6 0.082 12.3 0.1 2.4 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.12 gi|452209430|ref|YP_007489544.1| - 0.013 15.0 0.1 0.027 13.9 0.1 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit zf-FCS PF06467.9 gi|452209430|ref|YP_007489544.1| - 0.057 13.0 1.0 0.11 12.1 0.7 1.6 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif Prot_inhib_II PF02428.10 gi|452209430|ref|YP_007489544.1| - 0.081 12.9 2.3 0.17 11.9 1.6 1.6 1 1 0 1 1 1 0 Potato type II proteinase inhibitor family HTH_9 PF08221.6 gi|452209430|ref|YP_007489544.1| - 0.1 12.4 0.0 0.27 11.1 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF4423 PF14394.1 gi|452209430|ref|YP_007489544.1| - 0.14 11.7 0.0 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) zf-B_box PF00643.19 gi|452209430|ref|YP_007489544.1| - 4.7 7.1 5.7 1.1 9.2 1.3 1.9 2 1 0 2 2 2 0 B-box zinc finger Pyr_excise PF03013.9 gi|452209431|ref|YP_007489545.1| - 7.2e-05 22.5 0.1 0.0001 22.0 0.1 1.3 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase UPF0242 PF06785.6 gi|452209431|ref|YP_007489545.1| - 0.076 11.6 0.0 0.083 11.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) RELT PF12606.3 gi|452209431|ref|YP_007489545.1| - 0.088 11.9 0.3 10 5.3 0.0 2.9 3 0 0 3 3 3 0 Tumour necrosis factor receptor superfamily member 19 DUF1129 PF06570.6 gi|452209432|ref|YP_007489546.1| - 0.01 15.1 0.7 0.015 14.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) PPC PF04151.10 gi|452209432|ref|YP_007489546.1| - 0.022 15.7 0.1 0.69 10.9 0.0 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain DUF4131 PF13567.1 gi|452209432|ref|YP_007489546.1| - 1.4 8.3 13.4 0.89 8.9 0.8 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) AhpC-TSA PF00578.16 gi|452209433|ref|YP_007489547.1| - 4.5e-11 42.4 0.0 5.8e-11 42.1 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|452209433|ref|YP_007489547.1| - 0.0073 15.8 0.0 0.0079 15.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin DUF378 PF04070.7 gi|452209434|ref|YP_007489548.1| - 4.4e-24 83.8 8.2 5e-24 83.7 5.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) IBV_3C PF03620.8 gi|452209434|ref|YP_007489548.1| - 0.11 12.3 0.2 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 IBV 3C protein DUF751 PF05421.6 gi|452209434|ref|YP_007489548.1| - 0.15 12.3 2.9 3.1 8.1 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF751) DUF981 PF06168.6 gi|452209434|ref|YP_007489548.1| - 3 7.5 7.2 3.9 7.2 0.4 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF981) Tetraspannin PF00335.15 gi|452209435|ref|YP_007489549.1| - 0.24 10.6 3.4 0.087 12.0 0.9 1.3 2 0 0 2 2 2 0 Tetraspanin family Lactamase_B_2 PF12706.2 gi|452209436|ref|YP_007489550.1| - 1.4e-25 90.0 0.5 1.7e-25 89.7 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452209436|ref|YP_007489550.1| - 1.6e-20 73.5 0.8 2.5e-20 72.9 0.6 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|452209436|ref|YP_007489550.1| - 1.2e-11 44.5 0.3 1.8e-11 43.9 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.24 gi|452209437|ref|YP_007489551.1| - 2.9e-38 131.0 0.2 2.1e-37 128.2 0.0 2.3 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|452209437|ref|YP_007489551.1| - 6.1e-08 33.5 3.3 3.2e-07 31.1 0.0 3.3 2 2 0 2 2 2 1 AAA domain AAA_5 PF07728.9 gi|452209437|ref|YP_007489551.1| - 4e-06 26.6 0.0 2e-05 24.3 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|452209437|ref|YP_007489551.1| - 4.3e-06 27.0 1.1 6.5e-05 23.2 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|452209437|ref|YP_007489551.1| - 5.4e-05 23.2 2.3 0.0044 17.0 0.0 3.1 2 1 1 4 4 4 1 AAA ATPase domain AAA_33 PF13671.1 gi|452209437|ref|YP_007489551.1| - 0.0001 22.1 0.0 0.00022 21.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.9 gi|452209437|ref|YP_007489551.1| - 0.00011 22.2 1.2 0.00054 19.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|452209437|ref|YP_007489551.1| - 0.00017 21.6 0.6 0.0065 16.6 0.1 3.1 3 1 0 3 3 2 1 AAA domain RuvB_N PF05496.7 gi|452209437|ref|YP_007489551.1| - 0.0002 20.5 0.1 0.00047 19.2 0.1 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus DUF815 PF05673.8 gi|452209437|ref|YP_007489551.1| - 0.00046 19.1 0.1 0.0009 18.2 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) TIP49 PF06068.8 gi|452209437|ref|YP_007489551.1| - 0.00063 18.5 0.1 0.0036 16.0 0.0 2.2 2 1 0 2 2 2 1 TIP49 C-terminus AAA_14 PF13173.1 gi|452209437|ref|YP_007489551.1| - 0.00093 19.1 0.2 0.0071 16.2 0.0 2.4 2 2 0 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|452209437|ref|YP_007489551.1| - 0.0012 18.8 0.0 0.0038 17.2 0.0 2.0 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|452209437|ref|YP_007489551.1| - 0.0025 17.2 0.8 0.22 10.9 0.0 2.7 2 1 1 3 3 3 1 AAA domain MMR_HSR1 PF01926.18 gi|452209437|ref|YP_007489551.1| - 0.003 17.4 0.0 0.012 15.6 0.0 2.0 2 1 0 2 2 2 1 50S ribosome-binding GTPase Mg_chelatase PF01078.16 gi|452209437|ref|YP_007489551.1| - 0.0033 16.6 0.0 0.0095 15.1 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI SKI PF01202.17 gi|452209437|ref|YP_007489551.1| - 0.0036 17.1 0.0 0.012 15.5 0.0 1.9 1 0 0 1 1 1 1 Shikimate kinase IstB_IS21 PF01695.12 gi|452209437|ref|YP_007489551.1| - 0.0066 15.8 0.0 0.018 14.4 0.0 1.7 1 1 0 1 1 1 1 IstB-like ATP binding protein ResIII PF04851.10 gi|452209437|ref|YP_007489551.1| - 0.0072 16.1 0.2 0.026 14.3 0.0 2.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.1 gi|452209437|ref|YP_007489551.1| - 0.0082 15.7 0.1 0.03 13.9 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|452209437|ref|YP_007489551.1| - 0.013 15.2 0.1 0.046 13.4 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain AAA_23 PF13476.1 gi|452209437|ref|YP_007489551.1| - 0.017 15.4 4.0 5.9 7.1 1.5 2.8 2 1 1 3 3 3 0 AAA domain AAA_24 PF13479.1 gi|452209437|ref|YP_007489551.1| - 0.045 13.3 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.1 gi|452209437|ref|YP_007489551.1| - 0.045 13.8 0.0 0.095 12.7 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.7 gi|452209437|ref|YP_007489551.1| - 0.046 12.8 0.1 0.15 11.1 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin CPT PF07931.7 gi|452209437|ref|YP_007489551.1| - 0.065 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein Sigma54_activat PF00158.21 gi|452209437|ref|YP_007489551.1| - 0.092 12.2 0.0 0.26 10.7 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|452209437|ref|YP_007489551.1| - 0.11 12.6 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.22 gi|452209437|ref|YP_007489551.1| - 0.13 12.5 0.1 0.83 9.9 0.0 2.1 1 1 1 2 2 2 0 ABC transporter Herpes_UL31 PF02718.9 gi|452209437|ref|YP_007489551.1| - 0.14 10.7 0.6 0.24 10.0 0.4 1.3 1 0 0 1 1 1 0 Herpesvirus UL31-like protein SAICAR_synt PF01259.13 gi|452209438|ref|YP_007489552.1| - 8.7e-57 192.0 0.1 9.8e-57 191.8 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF650 PF04894.7 gi|452209439|ref|YP_007489553.1| - 4.2e-102 341.2 0.0 5.2e-102 340.9 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|452209439|ref|YP_007489553.1| - 7.7e-39 131.7 0.0 1.2e-38 131.0 0.0 1.3 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) Sigma70_r4 PF04545.11 gi|452209440|ref|YP_007489554.1| - 0.00049 19.3 0.0 0.0012 18.1 0.0 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_3 PF01381.17 gi|452209440|ref|YP_007489554.1| - 0.00084 19.1 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4_2 PF08281.7 gi|452209440|ref|YP_007489554.1| - 0.0026 17.2 0.0 0.0073 15.7 0.0 1.7 1 1 1 2 2 2 1 Sigma-70, region 4 HTH_Crp_2 PF13545.1 gi|452209440|ref|YP_007489554.1| - 0.012 15.3 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|452209440|ref|YP_007489554.1| - 0.018 14.3 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|452209440|ref|YP_007489554.1| - 0.021 14.4 0.0 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_19 PF12844.2 gi|452209440|ref|YP_007489554.1| - 0.026 14.5 0.0 0.074 13.1 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain MarR_2 PF12802.2 gi|452209440|ref|YP_007489554.1| - 0.034 13.8 0.0 0.065 12.9 0.0 1.5 1 0 0 1 1 1 0 MarR family Phage_NinH PF06322.6 gi|452209440|ref|YP_007489554.1| - 0.069 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Phage NinH protein HTH_31 PF13560.1 gi|452209440|ref|YP_007489554.1| - 0.089 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_37 PF13744.1 gi|452209440|ref|YP_007489554.1| - 0.12 12.1 0.0 0.22 11.3 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain SUI1 PF01253.17 gi|452209441|ref|YP_007489555.1| - 8.7e-24 83.1 0.4 1e-23 82.9 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 AIRS PF00586.19 gi|452209444|ref|YP_007489558.1| - 7.6e-44 147.8 2.7 6e-26 90.5 0.1 3.5 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|452209444|ref|YP_007489558.1| - 1.8e-43 148.1 6.3 1.4e-29 103.1 0.2 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain Glyco_hydro_57 PF03065.10 gi|452209446|ref|YP_007489560.1| - 4.4e-48 164.0 0.0 8.1e-47 159.8 0.0 2.0 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.10 gi|452209447|ref|YP_007489561.1| - 2.9e-77 260.0 0.1 3.6e-76 256.3 0.1 2.1 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.16 gi|452209447|ref|YP_007489561.1| - 0.00018 21.1 0.0 0.00028 20.4 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase V4R PF02830.13 gi|452209448|ref|YP_007489562.1| - 3.7e-19 68.3 0.0 7.4e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 V4R domain Glyco_hydro_15 PF00723.16 gi|452209449|ref|YP_007489563.1| - 1.1e-13 50.5 0.0 5.8e-07 28.4 0.1 3.4 2 1 1 3 3 3 3 Glycosyl hydrolases family 15 DUF608 PF04685.8 gi|452209449|ref|YP_007489563.1| - 3.8e-06 25.8 0.1 7.2e-06 24.9 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF608 Prenyltrans_2 PF13249.1 gi|452209449|ref|YP_007489563.1| - 0.0005 20.4 0.5 1.2 9.6 0.0 2.9 2 1 1 3 3 3 2 Prenyltransferase-like DUF3938 PF13074.1 gi|452209449|ref|YP_007489563.1| - 0.023 14.5 0.0 0.091 12.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) DUF4264 PF14084.1 gi|452209450|ref|YP_007489564.1| - 0.034 13.5 0.1 0.046 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) tRNA-synt_2b PF00587.20 gi|452209451|ref|YP_007489565.1| - 1.9e-36 125.2 0.0 2.9e-36 124.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|452209451|ref|YP_007489565.1| - 1.1e-30 105.8 2.4 1.8e-30 105.1 1.6 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Laminin_I PF06008.9 gi|452209451|ref|YP_007489565.1| - 0.06 12.6 0.1 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Laminin Domain I Phage_GP20 PF06810.6 gi|452209451|ref|YP_007489565.1| - 0.088 12.2 2.2 0.15 11.5 1.5 1.2 1 0 0 1 1 1 0 Phage minor structural protein GP20 DivIC PF04977.10 gi|452209451|ref|YP_007489565.1| - 0.38 10.2 4.1 0.71 9.3 1.6 2.0 1 1 1 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.3 gi|452209451|ref|YP_007489565.1| - 8.3 6.2 7.7 0.45 10.3 1.4 1.8 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Peptidase_S49 PF01343.13 gi|452209452|ref|YP_007489566.1| - 7.2e-45 152.5 0.2 1.4e-44 151.5 0.1 1.5 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.18 gi|452209452|ref|YP_007489566.1| - 2.6e-05 23.9 1.6 0.0022 17.6 0.3 2.3 2 0 0 2 2 2 2 Clp protease Ligase_CoA PF00549.14 gi|452209452|ref|YP_007489566.1| - 0.01 15.4 0.1 0.022 14.3 0.1 1.5 1 0 0 1 1 1 0 CoA-ligase Zip PF02535.17 gi|452209452|ref|YP_007489566.1| - 0.037 13.0 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter p25-alpha PF05517.7 gi|452209452|ref|YP_007489566.1| - 0.054 13.7 0.1 5.4 7.2 0.0 2.3 2 0 0 2 2 2 0 p25-alpha Peptidase_S8 PF00082.17 gi|452209452|ref|YP_007489566.1| - 0.092 11.8 6.3 0.14 11.2 4.3 1.4 1 1 0 1 1 1 0 Subtilase family DUF912 PF06024.7 gi|452209452|ref|YP_007489566.1| - 0.12 12.4 0.1 0.3 11.1 0.1 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) tRNA-synt_1g PF09334.6 gi|452209453|ref|YP_007489567.1| - 5.5e-147 489.4 0.0 6.9e-147 489.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.15 gi|452209453|ref|YP_007489567.1| - 2.5e-26 91.3 0.4 2.5e-26 91.3 0.3 2.3 3 0 0 3 3 3 1 Putative tRNA binding domain Anticodon_1 PF08264.8 gi|452209453|ref|YP_007489567.1| - 6.9e-20 71.3 0.1 1.1e-19 70.6 0.0 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1 PF00133.17 gi|452209453|ref|YP_007489567.1| - 7e-20 70.5 0.0 1.4e-10 39.8 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 gi|452209453|ref|YP_007489567.1| - 3.6e-16 59.1 0.0 3.7e-10 39.4 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|452209453|ref|YP_007489567.1| - 0.0084 14.8 0.0 0.089 11.4 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|452209453|ref|YP_007489567.1| - 0.043 12.6 0.0 4.2 6.0 0.0 2.6 2 1 1 3 3 3 0 tRNA synthetases class I (R) DZR PF12773.2 gi|452209453|ref|YP_007489567.1| - 0.33 10.7 9.8 2.5 7.9 7.0 2.1 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|452209453|ref|YP_007489567.1| - 5.2 6.4 14.0 5.2 6.4 3.9 3.2 2 1 1 3 3 3 0 zinc-ribbon domain CYTH PF01928.16 gi|452209454|ref|YP_007489568.1| - 8.8e-42 142.8 0.2 9.8e-42 142.7 0.2 1.0 1 0 0 1 1 1 1 CYTH domain DUF35 PF01796.12 gi|452209455|ref|YP_007489569.1| - 2.8e-17 62.6 0.0 3.8e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|452209455|ref|YP_007489569.1| - 1.7e-11 43.6 1.0 2.7e-11 43.0 0.7 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-dskA_traR PF01258.12 gi|452209455|ref|YP_007489569.1| - 0.047 13.4 2.9 0.087 12.5 2.0 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.2 gi|452209455|ref|YP_007489569.1| - 0.086 12.6 1.1 0.13 12.0 0.8 1.2 1 0 0 1 1 1 0 Double zinc ribbon Thiolase_C PF02803.13 gi|452209456|ref|YP_007489570.1| - 3.7e-12 45.7 3.0 1.8e-11 43.5 1.3 2.7 2 1 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|452209456|ref|YP_007489570.1| - 1.1e-11 44.2 2.5 1.1e-10 40.9 0.8 2.2 2 0 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|452209456|ref|YP_007489570.1| - 0.00015 21.3 4.8 0.00015 21.3 3.4 1.8 2 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 gi|452209456|ref|YP_007489570.1| - 0.038 13.8 0.1 0.038 13.8 0.1 3.1 4 0 0 4 4 4 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.5 gi|452209456|ref|YP_007489570.1| - 0.18 11.4 4.4 0.33 10.6 0.7 2.6 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.5 gi|452209457|ref|YP_007489571.1| - 6.6e-11 42.0 0.0 1.5e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.5 gi|452209457|ref|YP_007489571.1| - 5.4e-06 26.0 0.0 0.00024 20.7 0.0 2.1 1 1 1 2 2 2 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.12 gi|452209457|ref|YP_007489571.1| - 0.00014 21.4 0.2 0.0002 20.9 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.5 gi|452209457|ref|YP_007489571.1| - 0.0087 15.7 2.9 0.0087 15.7 2.0 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.18 gi|452209457|ref|YP_007489571.1| - 0.075 11.9 0.7 0.12 11.3 0.5 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain HTH_3 PF01381.17 gi|452209458|ref|YP_007489572.1| - 3.5e-08 33.1 0.0 1.6e-07 31.0 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|452209458|ref|YP_007489572.1| - 1.6e-07 31.2 0.0 4.5e-07 29.8 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|452209458|ref|YP_007489572.1| - 0.0021 18.2 0.0 0.0061 16.7 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain NUMOD1 PF07453.8 gi|452209458|ref|YP_007489572.1| - 0.042 13.6 0.1 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 NUMOD1 domain Cas_Cas4 PF01930.12 gi|452209459|ref|YP_007489573.1| - 0.0012 18.7 0.0 0.12 12.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF83 Cas_Cas4 PF01930.12 gi|452209461|ref|YP_007489575.1| - 5.3e-06 26.4 1.8 5.8e-06 26.3 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 DUF1272 PF06906.6 gi|452209461|ref|YP_007489575.1| - 0.072 12.9 0.8 0.091 12.6 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) DUF3038 PF11237.3 gi|452209463|ref|YP_007489577.1| - 0.075 12.8 0.3 6.2 6.5 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3038) Scm3 PF10384.4 gi|452209463|ref|YP_007489577.1| - 0.082 12.4 4.6 2.2 7.8 0.3 2.6 2 0 0 2 2 2 0 Centromere protein Scm3 DUF883 PF05957.8 gi|452209463|ref|YP_007489577.1| - 0.11 12.8 5.5 4.8 7.6 0.1 2.7 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.14 gi|452209464|ref|YP_007489578.1| - 3.8e-40 137.5 0.0 6.3e-40 136.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.15 gi|452209464|ref|YP_007489578.1| - 8.3e-21 73.5 0.1 1.9e-20 72.3 0.1 1.6 1 0 0 1 1 1 1 PUA domain Fer4 PF00037.22 gi|452209464|ref|YP_007489578.1| - 1.2e-08 34.1 15.4 5.2e-05 22.6 2.1 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452209464|ref|YP_007489578.1| - 6.8e-07 29.4 6.8 6.8e-07 29.4 4.7 2.3 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209464|ref|YP_007489578.1| - 7.3e-07 29.4 11.8 7.3e-07 29.4 8.2 2.2 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209464|ref|YP_007489578.1| - 8.7e-07 28.5 13.4 8.6e-05 22.2 1.5 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209464|ref|YP_007489578.1| - 0.00012 21.7 11.4 0.00049 19.8 7.9 2.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209464|ref|YP_007489578.1| - 0.00013 21.7 10.1 0.00013 21.7 7.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209464|ref|YP_007489578.1| - 0.00055 19.9 11.9 0.0031 17.4 8.2 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209464|ref|YP_007489578.1| - 0.0006 19.5 2.5 0.0006 19.5 1.7 3.6 4 0 0 4 4 3 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452209464|ref|YP_007489578.1| - 0.0061 16.7 3.1 0.0061 16.7 2.2 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452209464|ref|YP_007489578.1| - 0.012 15.9 12.0 0.32 11.3 2.2 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209464|ref|YP_007489578.1| - 0.014 16.1 3.2 0.014 16.1 2.2 3.8 4 1 1 5 5 3 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|452209464|ref|YP_007489578.1| - 0.018 15.5 5.8 0.018 15.5 4.0 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209464|ref|YP_007489578.1| - 0.031 14.7 13.4 1.3 9.4 1.1 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain S19 PF06756.6 gi|452209464|ref|YP_007489578.1| - 0.048 13.5 0.0 0.099 12.5 0.0 1.4 1 0 0 1 1 1 0 Chorion protein S19 C-terminal Fer4_15 PF13459.1 gi|452209464|ref|YP_007489578.1| - 5.6 7.6 14.9 15 6.2 2.2 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain Inhibitor_I42 PF09394.5 gi|452209465|ref|YP_007489579.1| - 4.1e-17 62.2 0.0 4.7e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 IMS PF00817.15 gi|452209466|ref|YP_007489580.1| - 2.2e-38 131.3 0.0 4.3e-38 130.4 0.0 1.5 2 0 0 2 2 2 1 impB/mucB/samB family IMS_C PF11799.3 gi|452209466|ref|YP_007489580.1| - 1.7e-13 50.6 0.3 2.7e-13 49.9 0.2 1.3 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|452209466|ref|YP_007489580.1| - 2.1e-11 43.1 0.1 6.8e-11 41.5 0.0 2.0 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|452209466|ref|YP_007489580.1| - 1.7e-05 24.9 0.2 4e-05 23.7 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.4 gi|452209466|ref|YP_007489580.1| - 0.00061 19.2 0.0 0.0015 18.0 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.3 gi|452209466|ref|YP_007489580.1| - 0.013 15.4 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DUF1805 PF08827.6 gi|452209466|ref|YP_007489580.1| - 0.07 12.9 0.0 1.4 8.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) ABC_tran PF00005.22 gi|452209467|ref|YP_007489581.1| - 2.7e-32 111.9 0.0 4e-32 111.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209467|ref|YP_007489581.1| - 1.8e-16 60.9 0.5 6.8e-12 45.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452209467|ref|YP_007489581.1| - 7.9e-09 35.0 0.0 2.4e-08 33.5 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452209467|ref|YP_007489581.1| - 0.0015 18.0 0.0 0.0028 17.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|452209467|ref|YP_007489581.1| - 0.0023 17.4 0.1 1.8 7.9 0.1 2.2 1 1 0 2 2 2 2 AAA-like domain SbcCD_C PF13558.1 gi|452209467|ref|YP_007489581.1| - 0.0028 17.5 0.0 0.043 13.7 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.1 gi|452209467|ref|YP_007489581.1| - 0.0079 15.2 0.0 1.2 8.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain BCA_ABC_TP_C PF12399.3 gi|452209467|ref|YP_007489581.1| - 0.03 14.0 0.0 0.078 12.6 0.0 1.8 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter MMR_HSR1 PF01926.18 gi|452209467|ref|YP_007489581.1| - 0.045 13.7 0.2 0.21 11.5 0.1 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.1 gi|452209467|ref|YP_007489581.1| - 0.046 13.6 0.5 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|452209467|ref|YP_007489581.1| - 0.048 13.9 0.0 0.082 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|452209467|ref|YP_007489581.1| - 0.062 12.4 0.0 0.095 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Mg_chelatase PF01078.16 gi|452209467|ref|YP_007489581.1| - 0.062 12.4 0.1 0.13 11.4 0.0 1.5 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI Miro PF08477.8 gi|452209467|ref|YP_007489581.1| - 0.079 13.4 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein CbiQ PF02361.11 gi|452209468|ref|YP_007489582.1| - 3e-30 105.4 6.0 3.9e-30 105.1 4.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein Ytp1 PF10355.4 gi|452209468|ref|YP_007489582.1| - 0.14 11.2 0.8 0.23 10.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (Ytp1) PAS_3 PF08447.6 gi|452209469|ref|YP_007489583.1| - 1.9e-40 136.8 0.4 6.8e-21 74.1 0.0 2.8 2 0 0 2 2 2 2 PAS fold HisKA_2 PF07568.7 gi|452209469|ref|YP_007489583.1| - 1e-31 108.6 1.4 1e-31 108.6 1.0 2.2 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|452209469|ref|YP_007489583.1| - 1.6e-16 60.5 0.2 5.3e-07 29.9 0.0 3.6 3 1 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|452209469|ref|YP_007489583.1| - 6.1e-13 48.4 0.7 1.7e-12 47.0 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|452209469|ref|YP_007489583.1| - 2.1e-09 37.1 0.1 0.00032 20.4 0.0 3.0 3 0 0 3 3 3 2 PAS fold HATPase_c_2 PF13581.1 gi|452209469|ref|YP_007489583.1| - 8.9e-08 31.9 0.0 2.1e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.5 gi|452209469|ref|YP_007489583.1| - 0.0002 21.3 0.0 0.016 15.2 0.0 2.5 2 0 0 2 2 2 1 PAS fold HWE_HK PF07536.9 gi|452209469|ref|YP_007489583.1| - 0.00041 20.7 2.0 0.00054 20.3 0.3 2.1 2 0 0 2 2 1 1 HWE histidine kinase HATPase_c_3 PF13589.1 gi|452209469|ref|YP_007489583.1| - 0.0041 16.7 0.1 0.01 15.4 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4468 PF14730.1 gi|452209469|ref|YP_007489583.1| - 0.0079 15.8 0.4 1.6 8.5 0.0 3.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4468) with TBP-like fold MEDS PF14417.1 gi|452209469|ref|YP_007489583.1| - 0.0089 15.1 0.0 0.019 14.0 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain NAS PF03059.11 gi|452209470|ref|YP_007489584.1| - 1.9e-10 40.3 0.0 2.2e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 Nicotianamine synthase protein DUF2113 PF09886.4 gi|452209470|ref|YP_007489584.1| - 0.083 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) CbiM PF01891.11 gi|452209472|ref|YP_007489586.1| - 5.4e-58 195.9 23.3 6.1e-58 195.7 16.2 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region PDGLE PF13190.1 gi|452209473|ref|YP_007489587.1| - 1.2e-18 66.5 2.0 1.4e-18 66.3 1.4 1.0 1 0 0 1 1 1 1 PDGLE domain HhH-GPD PF00730.20 gi|452209474|ref|YP_007489588.1| - 6.9e-22 77.7 0.1 9.4e-22 77.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|452209474|ref|YP_007489588.1| - 5.8e-09 35.1 0.0 1.9e-08 33.5 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.4 gi|452209474|ref|YP_007489588.1| - 0.00016 21.6 4.5 0.0003 20.8 3.1 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.1 gi|452209474|ref|YP_007489588.1| - 0.0008 19.5 0.1 0.48 10.6 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix domain DUF3349 PF11829.3 gi|452209474|ref|YP_007489588.1| - 0.0022 18.3 0.1 0.022 15.1 0.0 2.3 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) AICARFT_IMPCHas PF01808.13 gi|452209475|ref|YP_007489589.1| - 2.6e-90 302.7 0.0 3.3e-90 302.3 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.17 gi|452209475|ref|YP_007489589.1| - 2.2e-26 91.6 0.0 3.8e-26 90.8 0.0 1.4 1 0 0 1 1 1 1 MGS-like domain MgsA_C PF12002.3 gi|452209475|ref|YP_007489589.1| - 0.0016 18.1 0.0 0.0045 16.6 0.0 1.7 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DUF1724 PF08350.5 gi|452209476|ref|YP_007489590.1| - 3e-23 81.1 0.5 7e-23 79.9 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_24 PF13412.1 gi|452209476|ref|YP_007489590.1| - 0.002 17.4 0.1 0.017 14.4 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|452209476|ref|YP_007489590.1| - 0.012 15.2 0.0 0.025 14.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family UbiA PF01040.13 gi|452209477|ref|YP_007489591.1| - 4.2e-29 101.5 4.0 5.1e-29 101.2 2.8 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family E1-E2_ATPase PF00122.15 gi|452209479|ref|YP_007489593.1| - 4.2e-67 225.5 9.4 4.2e-67 225.5 6.5 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|452209479|ref|YP_007489593.1| - 3.2e-42 144.1 9.6 9.4e-42 142.5 6.7 1.8 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|452209479|ref|YP_007489593.1| - 2e-31 110.0 0.1 1.3e-30 107.4 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|452209479|ref|YP_007489593.1| - 8.2e-20 70.0 0.1 4.1e-19 67.8 0.0 2.2 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_like2 PF13246.1 gi|452209479|ref|YP_007489593.1| - 6.9e-15 54.7 0.1 1.5e-14 53.6 0.0 1.6 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|452209479|ref|YP_007489593.1| - 2.8e-14 53.7 0.0 8.6e-14 52.1 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|452209479|ref|YP_007489593.1| - 8.3e-07 28.8 0.2 0.00012 21.7 0.2 2.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|452209479|ref|YP_007489593.1| - 0.025 14.8 0.0 0.053 13.7 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Methyltransf_18 PF12847.2 gi|452209480|ref|YP_007489594.1| - 5e-12 46.3 0.0 1e-11 45.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452209480|ref|YP_007489594.1| - 5.5e-08 32.1 0.0 7.9e-08 31.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.1 gi|452209480|ref|YP_007489594.1| - 4.4e-07 29.7 0.0 7.1e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209480|ref|YP_007489594.1| - 4.5e-07 29.5 0.0 9.2e-07 28.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452209480|ref|YP_007489594.1| - 4.9e-07 29.4 0.0 7.7e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|452209480|ref|YP_007489594.1| - 1e-06 29.1 0.0 2e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|452209480|ref|YP_007489594.1| - 4.3e-06 26.3 0.0 8.5e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_26 PF13659.1 gi|452209480|ref|YP_007489594.1| - 1e-05 25.5 0.0 1.4e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209480|ref|YP_007489594.1| - 3.1e-05 24.2 0.0 6.7e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452209480|ref|YP_007489594.1| - 0.0001 21.7 0.0 0.00022 20.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain GidB PF02527.10 gi|452209480|ref|YP_007489594.1| - 0.00015 20.9 0.0 0.00036 19.7 0.0 1.6 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G Methyltransf_11 PF08241.7 gi|452209480|ref|YP_007489594.1| - 0.00021 21.7 0.0 0.0004 20.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|452209480|ref|YP_007489594.1| - 0.00055 19.4 0.1 0.00083 18.8 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase CMAS PF02353.15 gi|452209480|ref|YP_007489594.1| - 0.0012 17.9 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DREV PF05219.7 gi|452209480|ref|YP_007489594.1| - 0.0014 17.5 0.0 0.0021 16.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Cons_hypoth95 PF03602.10 gi|452209480|ref|YP_007489594.1| - 0.0038 16.6 0.0 0.0066 15.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.13 gi|452209480|ref|YP_007489594.1| - 0.0073 15.4 0.0 0.01 14.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.12 gi|452209480|ref|YP_007489594.1| - 0.02 13.9 0.1 0.058 12.4 0.1 1.8 1 1 0 1 1 1 0 Putative methyltransferase PrmA PF06325.8 gi|452209480|ref|YP_007489594.1| - 0.022 13.9 0.0 0.05 12.7 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF938 PF06080.7 gi|452209480|ref|YP_007489594.1| - 0.031 13.8 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Met_10 PF02475.11 gi|452209480|ref|YP_007489594.1| - 0.073 12.6 0.0 0.17 11.4 0.0 1.5 1 1 0 1 1 1 0 Met-10+ like-protein Phage_Coat_A PF05357.8 gi|452209480|ref|YP_007489594.1| - 0.093 12.3 0.4 15 5.2 0.0 2.5 2 0 0 2 2 2 0 Phage Coat Protein A P21-Arc PF04062.9 gi|452209480|ref|YP_007489594.1| - 0.1 12.3 0.0 2.3 7.9 0.0 2.5 2 1 1 3 3 3 0 ARP2/3 complex ARPC3 (21 kDa) subunit Grp1_Fun34_YaaH PF01184.14 gi|452209481|ref|YP_007489595.1| - 2.8e-56 190.1 17.9 3.3e-56 189.9 12.4 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Tetraspannin PF00335.15 gi|452209481|ref|YP_007489595.1| - 1.8 7.8 9.3 2.6 7.2 6.3 1.4 1 1 0 1 1 1 0 Tetraspanin family iPGM_N PF06415.8 gi|452209482|ref|YP_007489596.1| - 5.4e-93 310.4 0.0 7.3e-93 309.9 0.0 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.13 gi|452209482|ref|YP_007489596.1| - 4.2e-86 288.4 0.0 4.9e-86 288.2 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|452209482|ref|YP_007489596.1| - 8.9e-07 28.5 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|452209482|ref|YP_007489596.1| - 0.0023 17.2 0.0 0.0051 16.0 0.0 1.6 1 0 0 1 1 1 1 Sulfatase PglZ PF08665.7 gi|452209482|ref|YP_007489596.1| - 0.018 14.6 0.1 0.033 13.8 0.1 1.4 1 0 0 1 1 1 0 PglZ domain DUF1554 PF07588.6 gi|452209482|ref|YP_007489596.1| - 0.11 11.9 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1554) GHMP_kinases_N PF00288.21 gi|452209483|ref|YP_007489597.1| - 9e-07 28.8 0.3 1.8e-06 27.9 0.2 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|452209483|ref|YP_007489597.1| - 1.3e-05 25.3 0.0 3.3e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal XPG_I PF00867.13 gi|452209484|ref|YP_007489598.1| - 2.5e-27 94.7 0.3 7.7e-27 93.1 0.0 1.9 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.12 gi|452209484|ref|YP_007489598.1| - 2.6e-20 72.5 0.0 5.3e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.15 gi|452209484|ref|YP_007489598.1| - 3.8e-05 23.8 0.6 9e-05 22.6 0.0 1.9 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.2 gi|452209484|ref|YP_007489598.1| - 0.027 14.3 0.0 0.055 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif Tropomyosin PF00261.15 gi|452209489|ref|YP_007489603.1| - 0.013 14.5 0.8 0.013 14.5 0.6 1.0 1 0 0 1 1 1 0 Tropomyosin HAUS-augmin3 PF14932.1 gi|452209489|ref|YP_007489603.1| - 0.014 14.6 0.3 0.014 14.6 0.2 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 DUF1664 PF07889.7 gi|452209489|ref|YP_007489603.1| - 0.018 14.8 0.3 0.021 14.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YvrJ PF12841.2 gi|452209489|ref|YP_007489603.1| - 0.034 13.4 1.4 1.6 8.0 0.1 2.1 2 0 0 2 2 2 0 YvrJ protein family MRFAP1 PF15155.1 gi|452209489|ref|YP_007489603.1| - 0.062 13.6 0.2 0.068 13.5 0.2 1.0 1 0 0 1 1 1 0 MORF4 family-associated protein1 MtrG PF04210.8 gi|452209489|ref|YP_007489603.1| - 0.086 12.5 1.6 0.41 10.3 0.1 2.0 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Baculo_PEP_C PF04513.7 gi|452209489|ref|YP_007489603.1| - 0.088 12.6 0.2 0.092 12.5 0.2 1.0 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HalX PF08663.5 gi|452209489|ref|YP_007489603.1| - 0.096 12.6 0.4 0.35 10.8 0.0 1.9 1 1 1 2 2 2 0 HalX domain DUF603 PF04645.7 gi|452209489|ref|YP_007489603.1| - 0.11 12.4 1.6 0.11 12.3 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF603 Nbl1_Borealin_N PF10444.4 gi|452209489|ref|YP_007489603.1| - 0.24 10.7 1.6 1.5 8.2 0.8 1.9 1 1 1 2 2 2 0 Nbl1 / Borealin N terminal DUF1119 PF06550.6 gi|452209490|ref|YP_007489604.1| - 5.1e-133 442.5 26.1 6.1e-133 442.2 18.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1119) ORMDL PF04061.9 gi|452209490|ref|YP_007489604.1| - 2.1 7.9 8.5 0.78 9.3 1.9 2.4 2 0 0 2 2 2 0 ORMDL family Hydrolase PF00702.21 gi|452209491|ref|YP_007489605.1| - 7.4e-16 59.2 0.4 3.3e-15 57.0 0.3 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|452209491|ref|YP_007489605.1| - 1.2e-06 28.7 0.1 1.5e-06 28.4 0.1 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452209491|ref|YP_007489605.1| - 2.1e-05 24.1 0.1 6.2e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_3 PF08282.7 gi|452209491|ref|YP_007489605.1| - 0.00027 20.6 0.5 0.18 11.3 0.0 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase ABC_tran PF00005.22 gi|452209492|ref|YP_007489606.1| - 4.4e-51 172.7 0.0 2.7e-25 89.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452209492|ref|YP_007489606.1| - 5.5e-07 29.8 1.1 0.26 11.2 0.1 4.1 3 1 0 3 3 3 1 AAA domain DUF258 PF03193.11 gi|452209492|ref|YP_007489606.1| - 2e-05 23.8 0.2 0.14 11.3 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|452209492|ref|YP_007489606.1| - 2.5e-05 23.6 0.9 0.53 9.4 0.0 3.3 2 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452209492|ref|YP_007489606.1| - 2.9e-05 23.3 0.7 0.22 10.5 0.0 3.4 4 0 0 4 4 4 2 AAA ATPase domain AAA_17 PF13207.1 gi|452209492|ref|YP_007489606.1| - 0.00028 21.6 1.2 0.11 13.3 0.2 2.9 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|452209492|ref|YP_007489606.1| - 0.00057 19.3 1.3 0.84 9.2 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|452209492|ref|YP_007489606.1| - 0.00061 19.6 0.0 1 9.3 0.0 3.3 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|452209492|ref|YP_007489606.1| - 0.001 18.7 0.6 1.4 8.5 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_18 PF13238.1 gi|452209492|ref|YP_007489606.1| - 0.0011 19.2 2.4 0.17 12.2 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.1 gi|452209492|ref|YP_007489606.1| - 0.0014 18.6 1.0 1.2 9.0 0.0 3.4 4 0 0 4 4 4 1 AAA ATPase domain AAA_23 PF13476.1 gi|452209492|ref|YP_007489606.1| - 0.0018 18.6 0.7 1.1 9.5 0.2 2.6 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452209492|ref|YP_007489606.1| - 0.003 17.6 0.1 2.5 8.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain PRK PF00485.13 gi|452209492|ref|YP_007489606.1| - 0.0037 16.8 0.1 2.2 7.7 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.1 gi|452209492|ref|YP_007489606.1| - 0.0046 16.8 0.1 1.1 9.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|452209492|ref|YP_007489606.1| - 0.0058 15.5 2.1 0.81 8.4 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_30 PF13604.1 gi|452209492|ref|YP_007489606.1| - 0.021 14.3 0.1 9.6 5.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|452209492|ref|YP_007489606.1| - 0.023 13.8 0.1 0.47 9.5 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_10 PF12846.2 gi|452209492|ref|YP_007489606.1| - 0.031 13.6 0.3 7.8 5.8 0.1 2.5 2 0 0 2 2 2 0 AAA-like domain MobB PF03205.9 gi|452209492|ref|YP_007489606.1| - 0.04 13.6 1.7 2.6 7.7 0.1 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|452209492|ref|YP_007489606.1| - 0.043 12.9 2.1 0.89 8.6 0.1 2.7 3 0 0 3 3 3 0 KaiC Rad50_zn_hook PF04423.9 gi|452209492|ref|YP_007489606.1| - 0.046 13.2 0.6 0.68 9.4 0.0 2.7 2 0 0 2 2 2 0 Rad50 zinc hook motif AAA_19 PF13245.1 gi|452209492|ref|YP_007489606.1| - 0.11 12.2 0.3 29 4.5 0.1 3.0 2 0 0 2 2 2 0 Part of AAA domain PduV-EutP PF10662.4 gi|452209492|ref|YP_007489606.1| - 0.11 11.9 0.6 5.7 6.4 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.12 gi|452209492|ref|YP_007489606.1| - 0.12 11.7 0.8 41 3.5 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein zf-C3HC4_3 PF13920.1 gi|452209492|ref|YP_007489606.1| - 0.19 11.4 0.5 0.31 10.7 0.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-FPG_IleRS PF06827.9 gi|452209492|ref|YP_007489606.1| - 0.25 11.0 0.0 0.25 11.0 0.0 1.9 2 0 0 2 2 1 0 Zinc finger found in FPG and IleRS AAA_13 PF13166.1 gi|452209492|ref|YP_007489606.1| - 0.28 9.5 0.7 3.7 5.8 0.0 2.5 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.12 gi|452209492|ref|YP_007489606.1| - 0.47 10.2 8.6 0.71 9.6 0.2 2.8 3 0 0 3 3 3 0 Domain of unknown function DUF87 NACHT PF05729.7 gi|452209492|ref|YP_007489606.1| - 1.8 8.1 5.7 1 8.9 0.3 2.6 2 0 0 2 2 2 0 NACHT domain Cut12 PF11500.3 gi|452209493|ref|YP_007489607.1| - 0.0056 16.3 0.0 0.0095 15.6 0.0 1.3 1 0 0 1 1 1 1 Spindle pole body formation-associated protein DUF4120 PF13496.1 gi|452209493|ref|YP_007489607.1| - 0.011 15.7 0.0 0.035 14.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) DUF2102 PF09875.4 gi|452209494|ref|YP_007489608.1| - 1.2e-44 150.1 0.0 1.7e-44 149.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) BCL_N PF04714.8 gi|452209494|ref|YP_007489608.1| - 0.75 9.4 3.9 14 5.3 0.0 3.0 3 1 0 3 3 3 0 BCL7, N-terminal conserver region DUF2112 PF09885.4 gi|452209495|ref|YP_007489609.1| - 8.9e-67 223.1 0.1 1.1e-66 222.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) Oxidored_nitro PF00148.14 gi|452209495|ref|YP_007489609.1| - 0.059 12.0 0.0 0.059 12.0 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase BcrAD_BadFG PF01869.15 gi|452209496|ref|YP_007489610.1| - 3e-56 190.7 4.0 3.9e-56 190.3 2.8 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.8 gi|452209496|ref|YP_007489610.1| - 0.0025 17.3 1.9 0.003 17.0 0.4 1.8 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.1 gi|452209496|ref|YP_007489610.1| - 0.023 14.5 3.3 0.78 9.5 0.1 2.6 2 0 0 2 2 2 0 Cell division protein FtsA MutL PF13941.1 gi|452209496|ref|YP_007489610.1| - 0.033 12.5 2.2 0.44 8.8 0.3 2.4 2 0 0 2 2 2 0 MutL protein DUF2113 PF09886.4 gi|452209497|ref|YP_007489611.1| - 4.1e-68 228.2 0.4 4.7e-68 228.0 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) MCR_C PF04609.7 gi|452209498|ref|YP_007489612.1| - 6.6e-115 382.5 0.5 7.4e-115 382.3 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C Peptidase_M10 PF00413.19 gi|452209499|ref|YP_007489613.1| - 2.5e-13 50.0 0.0 7.1e-13 48.5 0.0 1.6 1 1 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.4 gi|452209499|ref|YP_007489613.1| - 0.0016 17.3 0.1 0.0024 16.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_2 PF13574.1 gi|452209499|ref|YP_007489613.1| - 0.0018 18.3 0.0 0.0023 18.0 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.3 gi|452209499|ref|YP_007489613.1| - 0.0038 16.5 0.0 0.0051 16.1 0.0 1.1 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Metallopep PF12044.3 gi|452209499|ref|YP_007489613.1| - 0.011 14.2 0.0 0.014 13.8 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase family Reprolysin_3 PF13582.1 gi|452209499|ref|YP_007489613.1| - 0.036 14.6 0.0 0.045 14.2 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Astacin PF01400.19 gi|452209499|ref|YP_007489613.1| - 0.093 12.1 0.1 0.26 10.6 0.0 1.7 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) Peptidase_M54 PF07998.6 gi|452209499|ref|YP_007489613.1| - 0.11 12.2 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M54 NUDIX PF00293.23 gi|452209500|ref|YP_007489614.1| - 3.5e-22 78.5 0.0 4.4e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|452209500|ref|YP_007489614.1| - 9.7e-05 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain AFOR_C PF01314.13 gi|452209501|ref|YP_007489615.1| - 5.8e-106 354.3 0.0 9.1e-106 353.7 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|452209501|ref|YP_007489615.1| - 7.3e-63 211.5 2.8 1.1e-62 210.9 1.9 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain eIF-5a PF01287.15 gi|452209502|ref|YP_007489616.1| - 6.5e-13 48.4 0.4 6.5e-13 48.4 0.3 1.5 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|452209502|ref|YP_007489616.1| - 0.00045 20.0 0.0 0.0008 19.2 0.0 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain PLDc PF00614.17 gi|452209502|ref|YP_007489616.1| - 0.16 11.7 0.2 0.48 10.3 0.0 1.9 2 1 0 2 2 2 0 Phospholipase D Active site motif Arginase PF00491.16 gi|452209503|ref|YP_007489617.1| - 1.2e-78 264.2 0.0 1.3e-78 264.1 0.0 1.0 1 0 0 1 1 1 1 Arginase family SpoA PF01052.15 gi|452209505|ref|YP_007489619.1| - 0.13 11.8 0.0 0.23 11.0 0.0 1.4 1 1 0 1 1 1 0 Surface presentation of antigens (SPOA) DDE_Tnp_1 PF01609.16 gi|452209507|ref|YP_007489621.1| - 0.00047 19.7 0.0 0.00054 19.5 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain Peptidase_M73 PF12389.3 gi|452209507|ref|YP_007489621.1| - 0.049 13.0 0.0 0.05 13.0 0.0 1.0 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase HTH_3 PF01381.17 gi|452209508|ref|YP_007489622.1| - 4.4e-15 55.2 0.0 4.9e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|452209508|ref|YP_007489622.1| - 1.6e-13 50.4 0.1 1.7e-13 50.3 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|452209508|ref|YP_007489622.1| - 7.7e-10 38.8 0.0 9.6e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452209508|ref|YP_007489622.1| - 8.5e-07 29.0 0.0 9.4e-07 28.9 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.11 gi|452209508|ref|YP_007489622.1| - 0.00037 19.7 0.0 0.00053 19.2 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_25 PF13413.1 gi|452209508|ref|YP_007489622.1| - 0.0031 17.1 0.0 0.0038 16.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209508|ref|YP_007489622.1| - 0.0031 17.1 0.0 0.0049 16.4 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.1 gi|452209508|ref|YP_007489622.1| - 0.0089 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_37 PF13744.1 gi|452209508|ref|YP_007489622.1| - 0.037 13.8 0.0 0.043 13.6 0.0 1.3 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_CodY PF08222.6 gi|452209508|ref|YP_007489622.1| - 0.11 11.8 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_7 PF02796.10 gi|452209508|ref|YP_007489622.1| - 0.15 11.9 0.1 0.71 9.7 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.2 gi|452209508|ref|YP_007489622.1| - 0.15 11.7 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 MarR family DUF2178 PF09946.4 gi|452209509|ref|YP_007489623.1| - 1.1e-41 141.0 3.3 1.2e-41 140.8 2.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) IncA PF04156.9 gi|452209509|ref|YP_007489623.1| - 0.0012 18.4 3.9 0.0012 18.4 2.7 1.7 1 1 0 1 1 1 1 IncA protein UbiA PF01040.13 gi|452209509|ref|YP_007489623.1| - 0.0075 15.5 3.5 0.0093 15.2 2.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF4131 PF13567.1 gi|452209509|ref|YP_007489623.1| - 0.086 12.2 0.5 0.17 11.2 0.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_4 PF12730.2 gi|452209509|ref|YP_007489623.1| - 0.13 11.3 12.0 0.87 8.6 3.9 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein TcpE PF12648.2 gi|452209509|ref|YP_007489623.1| - 0.33 11.1 1.6 1.2 9.3 0.3 1.9 2 0 0 2 2 2 0 TcpE family Bax1-I PF01027.15 gi|452209509|ref|YP_007489623.1| - 0.57 9.7 11.9 0.062 12.8 3.0 2.0 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF4191 PF13829.1 gi|452209509|ref|YP_007489623.1| - 5.4 6.0 7.2 2.1 7.3 2.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) RseC_MucC PF04246.7 gi|452209509|ref|YP_007489623.1| - 6.1 6.4 6.4 0.64 9.5 0.5 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Na_H_Exchanger PF00999.16 gi|452209510|ref|YP_007489624.1| - 2.4e-80 269.9 53.8 3.4e-80 269.3 37.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|452209510|ref|YP_007489624.1| - 2.6e-21 75.7 0.1 4.9e-21 74.8 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|452209510|ref|YP_007489624.1| - 1.5e-12 46.8 0.0 4.2e-12 45.4 0.0 1.8 1 0 0 1 1 1 1 TrkA-C domain P-II PF00543.17 gi|452209511|ref|YP_007489625.1| - 0.00037 20.9 0.4 0.00048 20.5 0.3 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1538 PF07556.6 gi|452209512|ref|YP_007489626.1| - 8.5e-64 214.5 21.3 1e-63 214.2 14.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) TB2_DP1_HVA22 PF03134.14 gi|452209512|ref|YP_007489626.1| - 1.6 8.5 6.3 1.3 8.8 0.3 2.3 2 0 0 2 2 2 0 TB2/DP1, HVA22 family Na_H_Exchanger PF00999.16 gi|452209513|ref|YP_007489627.1| - 2.2e-56 191.0 52.0 3e-56 190.6 36.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|452209513|ref|YP_007489627.1| - 1.5e-24 86.1 0.9 2.5e-24 85.4 0.7 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|452209513|ref|YP_007489627.1| - 1.8e-07 30.6 0.8 5.2e-07 29.1 0.1 2.1 2 0 0 2 2 2 1 TrkA-C domain AlaDh_PNT_C PF01262.16 gi|452209513|ref|YP_007489627.1| - 0.015 14.8 0.1 0.027 14.0 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.13 gi|452209513|ref|YP_007489627.1| - 0.019 14.6 0.4 0.03 13.9 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LAM_C PF12544.3 gi|452209515|ref|YP_007489629.1| - 9.2e-37 125.9 0.0 1.7e-36 125.0 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.16 gi|452209515|ref|YP_007489629.1| - 2.1e-07 31.2 0.7 1.7e-06 28.3 0.1 2.3 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452209515|ref|YP_007489629.1| - 4.6e-05 23.5 1.6 0.0003 20.9 0.0 2.6 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452209515|ref|YP_007489629.1| - 0.00012 22.1 1.5 0.026 14.5 0.0 3.2 3 1 1 4 4 4 2 4Fe-4S single cluster domain FixO PF02433.10 gi|452209515|ref|YP_007489629.1| - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Proteasom_Rpn13 PF04683.8 gi|452209516|ref|YP_007489630.1| - 0.061 13.4 0.0 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 Proteasome complex subunit Rpn13 ubiquitin receptor T2SF PF00482.18 gi|452209517|ref|YP_007489631.1| - 3.5e-34 117.3 6.7 2.5e-17 62.9 0.5 3.1 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F DUF912 PF06024.7 gi|452209517|ref|YP_007489631.1| - 0.018 15.1 2.1 0.058 13.4 0.1 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) Pex24p PF06398.6 gi|452209517|ref|YP_007489631.1| - 0.14 10.9 1.1 1.8 7.2 0.1 2.3 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin TRAP-gamma PF07074.7 gi|452209517|ref|YP_007489631.1| - 0.35 10.3 4.1 1.5 8.3 0.1 3.1 3 0 0 3 3 3 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Baculo_11_kDa PF06143.6 gi|452209517|ref|YP_007489631.1| - 6.2 6.2 7.9 9.1 5.7 0.3 3.5 3 0 0 3 3 3 0 Baculovirus 11 kDa family T2SE PF00437.15 gi|452209518|ref|YP_007489632.1| - 4.5e-44 150.3 0.0 7.5e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|452209518|ref|YP_007489632.1| - 0.025 14.0 0.0 0.054 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|452209518|ref|YP_007489632.1| - 0.054 13.8 0.9 0.3 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.1 gi|452209518|ref|YP_007489632.1| - 1.1 9.0 0.0 1.1 9.0 0.0 3.0 3 1 0 3 3 3 0 AAA domain KaiC PF06745.8 gi|452209520|ref|YP_007489634.1| - 3.7e-46 157.0 0.0 4.1e-46 156.9 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|452209520|ref|YP_007489634.1| - 2.4e-07 30.3 0.2 5.5e-07 29.1 0.1 1.8 1 1 0 1 1 1 1 AAA domain GvpD PF07088.6 gi|452209520|ref|YP_007489634.1| - 7.7e-06 24.4 0.2 0.00018 20.0 0.2 2.1 1 1 0 1 1 1 1 GvpD gas vesicle protein NTPase_1 PF03266.10 gi|452209520|ref|YP_007489634.1| - 1.5e-05 24.7 0.2 4e-05 23.3 0.1 1.6 1 1 0 1 1 1 1 NTPase RecA PF00154.16 gi|452209520|ref|YP_007489634.1| - 1.7e-05 24.0 0.0 2.8e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein IstB_IS21 PF01695.12 gi|452209520|ref|YP_007489634.1| - 5.7e-05 22.6 0.2 0.00028 20.3 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.1 gi|452209520|ref|YP_007489634.1| - 7e-05 22.5 0.1 0.00012 21.7 0.1 1.3 1 0 0 1 1 1 1 Part of AAA domain AAA_16 PF13191.1 gi|452209520|ref|YP_007489634.1| - 0.0012 18.8 0.1 0.0017 18.3 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain T2SE PF00437.15 gi|452209520|ref|YP_007489634.1| - 0.0045 15.9 0.1 0.0072 15.2 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein MORN_2 PF07661.8 gi|452209520|ref|YP_007489634.1| - 0.0055 16.5 0.1 0.014 15.3 0.1 1.7 1 0 0 1 1 1 1 MORN repeat variant AAA_22 PF13401.1 gi|452209520|ref|YP_007489634.1| - 0.0061 16.6 0.4 0.02 15.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|452209520|ref|YP_007489634.1| - 0.007 16.0 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DEAD PF00270.24 gi|452209520|ref|YP_007489634.1| - 0.0084 15.6 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Sigma54_activat PF00158.21 gi|452209520|ref|YP_007489634.1| - 0.012 15.0 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain PAXNEB PF05625.6 gi|452209520|ref|YP_007489634.1| - 0.015 14.1 0.1 0.022 13.6 0.1 1.2 1 0 0 1 1 1 0 PAXNEB protein UPF0079 PF02367.12 gi|452209520|ref|YP_007489634.1| - 0.016 14.8 0.1 0.028 14.0 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 TIP49 PF06068.8 gi|452209520|ref|YP_007489634.1| - 0.019 13.6 0.0 0.03 13.0 0.0 1.3 1 0 0 1 1 1 0 TIP49 C-terminus ResIII PF04851.10 gi|452209520|ref|YP_007489634.1| - 0.019 14.7 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.1 gi|452209520|ref|YP_007489634.1| - 0.021 14.4 0.4 0.13 11.8 0.3 2.0 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|452209520|ref|YP_007489634.1| - 0.021 13.8 0.0 0.022 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) SRP54 PF00448.17 gi|452209520|ref|YP_007489634.1| - 0.024 14.0 0.5 0.059 12.8 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_29 PF13555.1 gi|452209520|ref|YP_007489634.1| - 0.028 13.9 0.2 0.069 12.6 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.1 gi|452209520|ref|YP_007489634.1| - 0.028 14.3 0.2 0.28 11.1 0.1 2.3 1 1 0 1 1 1 0 AAA domain DnaB_C PF03796.10 gi|452209520|ref|YP_007489634.1| - 0.054 12.3 0.0 0.073 11.9 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain TrwB_AAD_bind PF10412.4 gi|452209520|ref|YP_007489634.1| - 0.094 11.3 0.1 0.16 10.5 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.18 gi|452209520|ref|YP_007489634.1| - 0.25 10.7 1.2 0.47 9.8 0.8 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.1 gi|452209520|ref|YP_007489634.1| - 0.53 10.5 3.7 0.85 9.9 2.5 1.6 1 1 0 1 1 1 0 AAA domain DUF4445 PF14574.1 gi|452209522|ref|YP_007489636.1| - 1.7e-101 339.4 4.7 2.9e-101 338.7 3.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4_7 PF12838.2 gi|452209522|ref|YP_007489636.1| - 1e-06 28.9 12.2 2.3e-06 27.8 8.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209522|ref|YP_007489636.1| - 4.8e-05 23.0 11.5 0.00011 21.9 7.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209522|ref|YP_007489636.1| - 9.2e-05 22.6 12.1 0.00021 21.4 8.4 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209522|ref|YP_007489636.1| - 0.00021 21.0 11.3 0.00043 20.0 7.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209522|ref|YP_007489636.1| - 0.00053 20.6 12.7 0.0021 18.7 2.5 2.6 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|452209522|ref|YP_007489636.1| - 0.0007 19.0 3.2 0.0007 19.0 2.2 2.6 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452209522|ref|YP_007489636.1| - 0.0015 18.3 5.9 0.003 17.4 4.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209522|ref|YP_007489636.1| - 0.0065 16.3 14.3 0.05 13.4 2.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452209522|ref|YP_007489636.1| - 0.023 15.0 13.3 0.79 10.2 0.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209522|ref|YP_007489636.1| - 0.026 14.9 7.5 0.079 13.3 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209522|ref|YP_007489636.1| - 0.098 12.6 12.1 0.44 10.5 1.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DUF326 PF03860.11 gi|452209522|ref|YP_007489636.1| - 0.56 10.1 10.3 4.9 7.1 2.1 2.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Fer4_3 PF12798.2 gi|452209522|ref|YP_007489636.1| - 1.5 9.5 17.8 1.7 9.4 3.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209522|ref|YP_007489636.1| - 4.9 7.2 13.0 2.6 8.1 2.5 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209522|ref|YP_007489636.1| - 5.4 7.4 13.3 0.49 10.7 1.6 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Lyase_1 PF00206.15 gi|452209525|ref|YP_007489639.1| - 2.9e-54 184.3 1.0 4e-54 183.9 0.7 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|452209525|ref|YP_007489639.1| - 3e-26 91.2 0.2 9.3e-26 89.6 0.0 2.0 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus ASL_C2 PF14698.1 gi|452209525|ref|YP_007489639.1| - 0.058 13.4 0.1 5.1 7.2 0.0 3.1 3 0 0 3 3 3 0 Argininosuccinate lyase C-terminal Ribosomal_L40e PF01020.12 gi|452209526|ref|YP_007489640.1| - 3.9e-06 26.3 6.8 4.5e-06 26.1 4.7 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 gi|452209526|ref|YP_007489640.1| - 0.0011 18.7 1.1 0.0012 18.6 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-DHHC PF01529.15 gi|452209526|ref|YP_007489640.1| - 0.003 16.9 1.3 0.0032 16.8 0.9 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase zf-RanBP PF00641.13 gi|452209526|ref|YP_007489640.1| - 0.0044 16.0 4.4 0.0061 15.6 3.1 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zinc_ribbon_2 PF13240.1 gi|452209526|ref|YP_007489640.1| - 0.0089 15.4 0.4 0.013 14.9 0.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain HypA PF01155.14 gi|452209526|ref|YP_007489640.1| - 0.048 13.3 2.1 0.054 13.1 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family FYVE PF01363.16 gi|452209526|ref|YP_007489640.1| - 0.048 13.5 2.5 0.054 13.3 1.8 1.2 1 0 0 1 1 1 0 FYVE zinc finger DNA_RNApol_7kD PF03604.8 gi|452209526|ref|YP_007489640.1| - 0.074 12.5 6.0 0.15 11.5 4.1 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|452209526|ref|YP_007489640.1| - 0.089 12.0 1.5 0.14 11.4 1.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|452209526|ref|YP_007489640.1| - 0.12 12.1 2.5 1.2 8.9 2.1 1.9 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|452209526|ref|YP_007489640.1| - 0.52 10.3 4.5 1.6 8.7 0.4 2.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF2082 PF09855.4 gi|452209526|ref|YP_007489640.1| - 0.64 9.8 3.6 8.2 6.3 0.1 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-tcix PF14952.1 gi|452209526|ref|YP_007489640.1| - 0.82 9.0 9.2 1.2 8.4 6.4 1.4 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding Ribosomal_L37e PF01907.14 gi|452209526|ref|YP_007489640.1| - 0.86 9.4 7.1 0.83 9.4 3.0 2.0 1 1 1 2 2 2 0 Ribosomal protein L37e PcrB PF01884.12 gi|452209527|ref|YP_007489641.1| - 6.2e-79 264.4 2.3 7.4e-79 264.2 1.6 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|452209527|ref|YP_007489641.1| - 3.7e-06 26.3 0.3 7.4e-06 25.3 0.2 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Trp_syntA PF00290.15 gi|452209527|ref|YP_007489641.1| - 0.0035 15.9 0.8 0.024 13.2 0.2 2.0 2 0 0 2 2 2 1 Tryptophan synthase alpha chain NanE PF04131.9 gi|452209527|ref|YP_007489641.1| - 0.03 13.2 1.4 0.16 10.9 0.2 2.1 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.14 gi|452209527|ref|YP_007489641.1| - 0.041 12.9 0.2 0.077 12.0 0.2 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family CsgG PF03783.9 gi|452209527|ref|YP_007489641.1| - 0.041 12.9 0.3 0.065 12.3 0.2 1.3 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG ThiG PF05690.9 gi|452209527|ref|YP_007489641.1| - 0.23 10.5 4.6 2 7.4 1.1 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG ABC_tran PF00005.22 gi|452209528|ref|YP_007489642.1| - 4.4e-52 176.0 0.0 1.6e-26 93.2 0.0 2.5 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452209528|ref|YP_007489642.1| - 4.6e-15 56.3 5.5 1.8e-06 28.1 0.4 4.0 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|452209528|ref|YP_007489642.1| - 2e-08 33.7 1.0 0.012 14.7 0.0 4.1 4 0 0 4 4 4 2 AAA ATPase domain AAA_22 PF13401.1 gi|452209528|ref|YP_007489642.1| - 2.9e-08 33.9 2.5 0.03 14.4 0.0 3.6 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|452209528|ref|YP_007489642.1| - 3.5e-08 34.0 0.4 0.0025 18.1 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|452209528|ref|YP_007489642.1| - 4.3e-08 32.5 0.3 0.0049 16.3 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF258 PF03193.11 gi|452209528|ref|YP_007489642.1| - 5e-08 32.2 0.1 0.0062 15.7 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|452209528|ref|YP_007489642.1| - 6.4e-07 30.2 4.9 0.044 14.5 0.4 3.9 4 1 0 4 4 3 2 AAA domain AAA_16 PF13191.1 gi|452209528|ref|YP_007489642.1| - 8.6e-07 29.1 0.4 0.097 12.6 0.2 3.3 3 1 0 3 3 3 2 AAA ATPase domain SbcCD_C PF13558.1 gi|452209528|ref|YP_007489642.1| - 1e-05 25.3 0.2 0.063 13.1 0.0 3.4 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.1 gi|452209528|ref|YP_007489642.1| - 1.5e-05 24.5 0.2 1.3 8.4 0.0 4.0 4 0 0 4 4 4 2 AAA domain AAA_18 PF13238.1 gi|452209528|ref|YP_007489642.1| - 2.5e-05 24.5 0.1 0.15 12.3 0.0 3.2 3 0 0 3 3 2 2 AAA domain AAA_30 PF13604.1 gi|452209528|ref|YP_007489642.1| - 3.3e-05 23.5 0.1 0.19 11.2 0.0 2.7 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.17 gi|452209528|ref|YP_007489642.1| - 8.2e-05 21.5 0.4 0.1 11.4 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain MobB PF03205.9 gi|452209528|ref|YP_007489642.1| - 9.6e-05 22.1 0.3 0.54 9.9 0.0 2.9 3 0 0 3 3 2 2 Molybdopterin guanine dinucleotide synthesis protein B SMC_N PF02463.14 gi|452209528|ref|YP_007489642.1| - 0.00012 21.4 0.0 4 6.6 0.0 4.0 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain PRK PF00485.13 gi|452209528|ref|YP_007489642.1| - 0.00017 21.2 0.2 0.46 10.0 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_10 PF12846.2 gi|452209528|ref|YP_007489642.1| - 0.00032 20.2 3.7 0.96 8.8 0.1 3.7 3 2 1 4 4 4 2 AAA-like domain AAA_19 PF13245.1 gi|452209528|ref|YP_007489642.1| - 0.0013 18.4 0.9 2.5 7.9 0.0 3.3 3 0 0 3 3 3 1 Part of AAA domain AAA_33 PF13671.1 gi|452209528|ref|YP_007489642.1| - 0.0025 17.6 0.0 0.51 10.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.24 gi|452209528|ref|YP_007489642.1| - 0.0028 17.8 1.0 3.3 7.9 0.0 3.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|452209528|ref|YP_007489642.1| - 0.0029 17.5 1.1 9.9 6.0 0.0 3.7 4 0 0 4 4 3 0 AAA domain UPF0079 PF02367.12 gi|452209528|ref|YP_007489642.1| - 0.0043 16.6 0.8 0.9 9.1 0.0 2.8 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 MMR_HSR1 PF01926.18 gi|452209528|ref|YP_007489642.1| - 0.0057 16.6 0.9 1.2 9.1 0.3 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_28 PF13521.1 gi|452209528|ref|YP_007489642.1| - 0.0068 16.3 0.4 1.3 8.9 0.0 3.1 3 1 0 3 3 3 1 AAA domain ArgK PF03308.11 gi|452209528|ref|YP_007489642.1| - 0.01 14.6 0.3 0.059 12.1 0.0 2.0 2 0 0 2 2 2 0 ArgK protein Arch_ATPase PF01637.13 gi|452209528|ref|YP_007489642.1| - 0.011 15.3 1.6 4.4 6.9 0.0 3.1 3 0 0 3 3 3 0 Archaeal ATPase PduV-EutP PF10662.4 gi|452209528|ref|YP_007489642.1| - 0.012 15.1 0.1 1.2 8.6 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation APS_kinase PF01583.15 gi|452209528|ref|YP_007489642.1| - 0.012 15.3 0.1 3 7.4 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase Rad17 PF03215.10 gi|452209528|ref|YP_007489642.1| - 0.021 13.5 0.0 1.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Rad17 cell cycle checkpoint protein Mg_chelatase PF01078.16 gi|452209528|ref|YP_007489642.1| - 0.021 13.9 0.1 0.7 9.0 0.0 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.15 gi|452209528|ref|YP_007489642.1| - 0.032 12.9 0.1 1.5 7.3 0.0 2.3 2 0 0 2 2 2 0 G-protein alpha subunit NACHT PF05729.7 gi|452209528|ref|YP_007489642.1| - 0.034 13.8 3.2 2.2 7.9 0.1 3.1 3 0 0 3 3 3 0 NACHT domain DUF3987 PF13148.1 gi|452209528|ref|YP_007489642.1| - 0.034 12.7 0.1 4.3 5.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) cobW PF02492.14 gi|452209528|ref|YP_007489642.1| - 0.04 13.3 1.0 3.2 7.1 0.0 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.17 gi|452209528|ref|YP_007489642.1| - 0.048 13.8 0.4 6 7.0 0.0 2.5 2 0 0 2 2 2 0 RNA helicase T2SE PF00437.15 gi|452209528|ref|YP_007489642.1| - 0.053 12.4 0.1 1.9 7.3 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein Miro PF08477.8 gi|452209528|ref|YP_007489642.1| - 0.061 13.8 0.6 6.8 7.2 0.0 3.2 3 0 0 3 3 3 0 Miro-like protein NTPase_1 PF03266.10 gi|452209528|ref|YP_007489642.1| - 0.079 12.6 4.1 0.68 9.6 0.1 2.7 3 0 0 3 3 2 0 NTPase IstB_IS21 PF01695.12 gi|452209528|ref|YP_007489642.1| - 0.08 12.3 0.1 6.6 6.1 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_5 PF07728.9 gi|452209528|ref|YP_007489642.1| - 0.097 12.4 0.9 4.4 7.0 0.1 2.9 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.12 gi|452209528|ref|YP_007489642.1| - 0.15 11.8 3.7 3.7 7.3 0.1 2.9 2 1 0 2 2 2 0 Domain of unknown function DUF87 Zeta_toxin PF06414.7 gi|452209528|ref|YP_007489642.1| - 0.17 10.9 0.6 9.8 5.2 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin FMN_red PF03358.10 gi|452209529|ref|YP_007489643.1| - 1e-06 28.3 0.0 1.8e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452209529|ref|YP_007489643.1| - 6.2e-05 22.6 0.0 7.2e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavin_Reduct PF01613.13 gi|452209530|ref|YP_007489644.1| - 2.7e-22 79.2 0.0 3.8e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain FMN_red PF03358.10 gi|452209530|ref|YP_007489644.1| - 0.017 14.5 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 NADPH-dependent FMN reductase MacB_PCD PF12704.2 gi|452209531|ref|YP_007489645.1| - 4.5e-36 124.5 5.0 4.5e-36 124.5 3.5 1.8 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452209531|ref|YP_007489645.1| - 7.3e-20 70.9 13.7 7.3e-20 70.9 9.5 2.1 2 0 0 2 2 2 1 FtsX-like permease family TMEM141 PF15110.1 gi|452209531|ref|YP_007489645.1| - 0.13 12.6 0.1 0.31 11.3 0.1 1.6 1 0 0 1 1 1 0 TMEM141 protein family DUF1053 PF06327.9 gi|452209531|ref|YP_007489645.1| - 0.14 12.5 1.4 1.8 8.9 0.3 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) YjgP_YjgQ PF03739.9 gi|452209531|ref|YP_007489645.1| - 0.96 8.1 7.9 0.73 8.5 2.8 2.2 2 0 0 2 2 2 0 Predicted permease YjgP/YjgQ family HATPase_c PF02518.21 gi|452209533|ref|YP_007489647.1| - 8.9e-35 118.7 0.3 2.1e-34 117.5 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452209533|ref|YP_007489647.1| - 2.2e-18 65.9 0.0 1.5e-17 63.3 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain MEDS PF14417.1 gi|452209533|ref|YP_007489647.1| - 1.6e-06 27.3 0.0 2.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c_3 PF13589.1 gi|452209533|ref|YP_007489647.1| - 6.2e-05 22.6 0.1 0.00012 21.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|452209533|ref|YP_007489647.1| - 0.0068 16.1 0.0 0.013 15.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NPCBM_assoc PF10633.4 gi|452209534|ref|YP_007489648.1| - 2.3e-08 33.9 0.0 0.087 12.8 0.0 3.9 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|452209534|ref|YP_007489648.1| - 3e-08 33.6 1.8 1.4e-05 25.0 0.0 3.2 3 2 1 4 4 4 2 CARDB DUF2393 PF09624.5 gi|452209534|ref|YP_007489648.1| - 0.00082 18.9 0.3 0.0042 16.6 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2393) DUF11 PF01345.13 gi|452209534|ref|YP_007489648.1| - 0.034 14.1 6.2 0.29 11.1 0.2 3.1 3 1 0 3 3 3 0 Domain of unknown function DUF11 DUF4366 PF14283.1 gi|452209534|ref|YP_007489648.1| - 0.081 12.3 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) ABC_tran PF00005.22 gi|452209535|ref|YP_007489649.1| - 1.5e-35 122.4 0.1 7.6e-35 120.1 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452209535|ref|YP_007489649.1| - 8.9e-12 45.5 0.0 8.6e-05 22.6 0.0 2.4 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452209535|ref|YP_007489649.1| - 1.6e-06 27.5 0.3 4.8e-05 22.6 0.0 2.7 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452209535|ref|YP_007489649.1| - 0.00026 20.4 1.8 0.00098 18.6 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|452209535|ref|YP_007489649.1| - 0.00058 19.3 0.1 0.0015 17.9 0.0 1.7 2 0 0 2 2 2 1 AAA-like domain MMR_HSR1 PF01926.18 gi|452209535|ref|YP_007489649.1| - 0.0022 17.9 0.0 0.0059 16.5 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF258 PF03193.11 gi|452209535|ref|YP_007489649.1| - 0.0033 16.6 0.0 0.0063 15.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|452209535|ref|YP_007489649.1| - 0.0064 17.3 0.0 0.013 16.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452209535|ref|YP_007489649.1| - 0.008 16.4 0.0 0.31 11.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|452209535|ref|YP_007489649.1| - 0.011 15.7 0.1 0.025 14.5 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|452209535|ref|YP_007489649.1| - 0.018 15.1 0.1 0.053 13.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|452209535|ref|YP_007489649.1| - 0.022 14.1 0.0 0.046 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|452209535|ref|YP_007489649.1| - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_23 PF13476.1 gi|452209535|ref|YP_007489649.1| - 0.12 12.6 0.1 0.12 12.6 0.1 1.8 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|452209535|ref|YP_007489649.1| - 0.14 12.3 0.4 0.66 10.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase MacB_PCD PF12704.2 gi|452209536|ref|YP_007489650.1| - 2e-37 129.0 3.2 2e-37 129.0 2.2 2.0 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452209536|ref|YP_007489650.1| - 4.8e-21 74.7 9.6 4.8e-21 74.7 6.7 2.1 2 0 0 2 2 2 1 FtsX-like permease family CARDB PF07705.6 gi|452209537|ref|YP_007489651.1| - 1.5e-09 37.8 4.5 4.4e-06 26.6 0.1 3.5 3 1 1 4 4 4 2 CARDB NPCBM_assoc PF10633.4 gi|452209537|ref|YP_007489651.1| - 3.2e-07 30.3 0.1 0.1 12.6 0.0 4.1 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|452209537|ref|YP_007489651.1| - 1.5e-05 24.9 6.1 0.01 15.8 0.3 3.4 3 1 0 3 3 3 2 Domain of unknown function DUF11 DUF2393 PF09624.5 gi|452209537|ref|YP_007489651.1| - 0.00015 21.2 0.5 0.0018 17.8 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF2393) Pilin PF00114.14 gi|452209537|ref|YP_007489651.1| - 0.23 12.1 1.8 0.46 11.2 0.2 2.3 2 0 0 2 2 2 0 Pilin (bacterial filament) Cadherin-like PF12733.2 gi|452209537|ref|YP_007489651.1| - 3.5 7.9 11.9 14 6.0 0.3 4.6 1 1 0 3 3 3 0 Cadherin-like beta sandwich domain DUF3930 PF13067.1 gi|452209540|ref|YP_007489654.1| - 0.085 12.7 0.7 0.1 12.4 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) DUF1268 PF06896.6 gi|452209542|ref|YP_007489656.1| - 0.13 12.5 0.5 0.15 12.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1268) ABC2_membrane PF01061.19 gi|452209543|ref|YP_007489657.1| - 2.5e-26 92.1 23.7 2.5e-26 92.1 16.5 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|452209543|ref|YP_007489657.1| - 7e-11 41.7 32.6 7e-11 41.7 22.6 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452209543|ref|YP_007489657.1| - 0.067 12.3 35.8 0.22 10.6 24.7 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.22 gi|452209544|ref|YP_007489658.1| - 5.9e-35 120.5 0.1 1.3e-34 119.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452209544|ref|YP_007489658.1| - 1.2e-14 55.0 0.1 1e-08 35.4 0.0 2.4 1 1 1 2 2 2 2 AAA domain DUF4162 PF13732.1 gi|452209544|ref|YP_007489658.1| - 1.6e-11 44.5 0.6 4.5e-11 43.1 0.2 2.0 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|452209544|ref|YP_007489658.1| - 1.8e-05 24.0 0.3 0.044 12.8 0.7 2.4 2 0 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|452209544|ref|YP_007489658.1| - 3.1e-05 23.2 0.1 6.7e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|452209544|ref|YP_007489658.1| - 0.00099 18.5 0.1 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|452209544|ref|YP_007489658.1| - 0.0027 16.9 0.5 0.018 14.2 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|452209544|ref|YP_007489658.1| - 0.0076 16.5 5.7 0.029 14.7 3.9 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452209544|ref|YP_007489658.1| - 0.012 15.9 1.6 2.1 8.6 0.1 2.6 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|452209544|ref|YP_007489658.1| - 0.012 15.7 1.0 0.053 13.6 0.3 2.3 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.1 gi|452209544|ref|YP_007489658.1| - 0.016 15.1 0.0 0.045 13.7 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain ACT_4 PF13291.1 gi|452209544|ref|YP_007489658.1| - 0.041 14.2 0.5 3 8.2 0.0 2.7 2 0 0 2 2 2 0 ACT domain MMR_HSR1 PF01926.18 gi|452209544|ref|YP_007489658.1| - 0.06 13.3 2.3 0.17 11.8 1.5 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_10 PF12846.2 gi|452209544|ref|YP_007489658.1| - 0.072 12.5 1.1 2.3 7.6 0.1 2.3 1 1 0 2 2 2 0 AAA-like domain Ammonium_transp PF00909.16 gi|452209545|ref|YP_007489659.1| - 7.7e-123 409.8 37.3 9.8e-123 409.5 25.8 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.17 gi|452209546|ref|YP_007489660.1| - 4.1e-40 136.3 2.4 4.6e-40 136.1 1.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PBP5_C PF07943.8 gi|452209546|ref|YP_007489660.1| - 0.011 15.6 0.4 0.017 15.0 0.3 1.2 1 0 0 1 1 1 0 Penicillin-binding protein 5, C-terminal domain HSP20 PF00011.16 gi|452209549|ref|YP_007489663.1| - 2.8e-05 23.9 0.3 0.001 18.8 0.2 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452209549|ref|YP_007489663.1| - 0.0017 18.8 0.0 0.0021 18.5 0.0 1.2 1 0 0 1 1 1 1 CS domain RIP PF00161.14 gi|452209549|ref|YP_007489663.1| - 0.0027 16.9 0.0 0.003 16.7 0.0 1.0 1 0 0 1 1 1 1 Ribosome inactivating protein DUF1059 PF06348.6 gi|452209550|ref|YP_007489664.1| - 0.00017 21.3 2.5 0.00025 20.8 1.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) PhosphMutase PF10143.4 gi|452209550|ref|YP_007489664.1| - 0.044 13.4 0.1 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DUF832 PF05734.6 gi|452209550|ref|YP_007489664.1| - 0.088 12.0 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) TspO_MBR PF03073.10 gi|452209551|ref|YP_007489665.1| - 1.2e-55 187.0 21.2 1.4e-55 186.8 14.7 1.0 1 0 0 1 1 1 1 TspO/MBR family Voltage_CLC PF00654.15 gi|452209551|ref|YP_007489665.1| - 1.8 7.5 7.8 2 7.3 5.4 1.2 1 0 0 1 1 1 0 Voltage gated chloride channel Gln-synt_C PF00120.19 gi|452209552|ref|YP_007489666.1| - 1.6e-102 342.0 0.0 2e-102 341.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|452209552|ref|YP_007489666.1| - 2.9e-27 94.0 0.0 6e-27 93.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain GATase_2 PF00310.16 gi|452209554|ref|YP_007489668.1| - 6.9e-23 80.9 0.0 6.9e-22 77.6 0.0 2.0 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|452209554|ref|YP_007489668.1| - 3.4e-17 62.6 0.0 5e-16 58.8 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|452209554|ref|YP_007489668.1| - 3.3e-09 36.5 0.0 5.8e-08 32.5 0.0 2.2 1 1 0 1 1 1 1 Glutamine amidotransferase domain Glu_synthase PF01645.12 gi|452209555|ref|YP_007489669.1| - 1.6e-134 448.4 0.0 2.2e-134 448.0 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|452209555|ref|YP_007489669.1| - 1.3e-11 43.9 5.3 9.4e-09 34.5 1.6 3.2 3 0 0 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|452209555|ref|YP_007489669.1| - 5.8e-10 38.5 0.1 3.3e-07 29.5 0.6 2.9 2 1 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain Glu_syn_central PF04898.9 gi|452209555|ref|YP_007489669.1| - 2.2e-09 36.9 0.2 5.2e-05 22.6 0.0 2.3 2 0 0 2 2 2 2 Glutamate synthase central domain Fer4_10 PF13237.1 gi|452209555|ref|YP_007489669.1| - 3.5e-09 36.3 22.3 5.6e-07 29.2 8.7 2.9 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209555|ref|YP_007489669.1| - 5.6e-09 36.2 15.7 1.8e-06 28.2 7.9 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209555|ref|YP_007489669.1| - 2.9e-08 33.8 17.5 1.1e-07 31.9 7.6 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452209555|ref|YP_007489669.1| - 1.5e-07 30.6 21.8 1e-05 24.9 0.7 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain NMO PF03060.10 gi|452209555|ref|YP_007489669.1| - 3.1e-07 29.8 8.7 2.8e-06 26.7 6.0 2.0 1 1 0 1 1 1 1 Nitronate monooxygenase Fer4_16 PF13484.1 gi|452209555|ref|YP_007489669.1| - 1.1e-06 29.3 11.1 0.00057 20.5 0.3 3.4 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|452209555|ref|YP_007489669.1| - 1.4e-06 27.8 21.3 1.3e-05 24.8 1.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209555|ref|YP_007489669.1| - 2.6e-06 27.1 9.6 2.6e-06 27.1 6.7 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209555|ref|YP_007489669.1| - 4.7e-06 26.8 7.8 0.13 12.6 0.1 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain DHO_dh PF01180.16 gi|452209555|ref|YP_007489669.1| - 1.2e-05 24.4 0.6 0.00015 20.8 0.2 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_8 PF13183.1 gi|452209555|ref|YP_007489669.1| - 1.3e-05 25.1 15.5 0.0031 17.4 8.9 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209555|ref|YP_007489669.1| - 0.00011 21.9 22.5 0.0016 18.2 1.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain His_biosynth PF00977.16 gi|452209555|ref|YP_007489669.1| - 0.00083 18.6 0.2 0.0017 17.7 0.2 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_18 PF13746.1 gi|452209555|ref|YP_007489669.1| - 0.0034 17.7 15.8 0.085 13.2 1.2 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209555|ref|YP_007489669.1| - 0.011 15.5 5.6 0.011 15.5 3.9 2.0 2 1 0 2 2 1 0 4Fe-4S dicluster domain PcrB PF01884.12 gi|452209555|ref|YP_007489669.1| - 0.012 14.8 0.8 0.19 10.9 0.3 2.3 1 1 1 2 2 2 0 PcrB family Fer4_4 PF12800.2 gi|452209555|ref|YP_007489669.1| - 0.045 14.1 2.5 0.045 14.1 1.7 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452209555|ref|YP_007489669.1| - 0.56 10.8 17.3 2.5 8.7 7.7 3.3 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452209555|ref|YP_007489669.1| - 9.1 6.7 21.2 0.33 11.3 1.2 3.2 3 0 0 3 3 2 0 4Fe-4S single cluster domain GXGXG PF01493.14 gi|452209556|ref|YP_007489670.1| - 2.4e-34 118.1 11.7 2.8e-34 117.9 8.1 1.0 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.8 gi|452209557|ref|YP_007489671.1| - 5e-39 133.3 0.0 5e-39 133.3 0.0 1.5 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|452209557|ref|YP_007489671.1| - 9.4e-21 73.4 0.3 2.3e-20 72.2 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|452209557|ref|YP_007489671.1| - 1e-07 31.2 2.8 1e-07 31.2 1.9 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452209557|ref|YP_007489671.1| - 1.3e-06 27.9 17.3 2.7e-06 26.9 1.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209557|ref|YP_007489671.1| - 1.4e-06 27.9 8.3 3.3e-06 26.7 5.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209557|ref|YP_007489671.1| - 2e-05 24.7 8.5 2e-05 24.7 5.9 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209557|ref|YP_007489671.1| - 5.3e-05 23.5 11.0 5.3e-05 23.5 7.6 2.1 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209557|ref|YP_007489671.1| - 7e-05 23.0 2.1 0.073 13.4 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209557|ref|YP_007489671.1| - 9.2e-05 22.4 14.5 0.0054 16.9 1.1 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209557|ref|YP_007489671.1| - 0.0002 21.0 2.8 0.0002 21.0 1.9 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209557|ref|YP_007489671.1| - 0.0017 19.0 13.7 0.0084 16.8 7.4 2.8 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|452209557|ref|YP_007489671.1| - 0.002 18.4 11.0 0.0028 18.0 0.3 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain DUF1344 PF07076.6 gi|452209557|ref|YP_007489671.1| - 0.031 13.8 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1344) Fer4_8 PF13183.1 gi|452209557|ref|YP_007489671.1| - 0.04 13.9 14.7 0.042 13.8 7.1 2.5 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209557|ref|YP_007489671.1| - 0.14 12.0 3.2 0.26 11.2 1.7 1.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209557|ref|YP_007489671.1| - 0.19 12.4 24.4 0.078 13.5 5.6 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452209557|ref|YP_007489671.1| - 0.23 11.8 7.2 1.7 9.0 0.8 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|452209557|ref|YP_007489671.1| - 0.95 9.3 14.8 0.12 12.2 1.8 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452209557|ref|YP_007489671.1| - 1.2 9.7 9.6 0.56 10.8 1.7 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain Zn_dep_PLPC PF00882.13 gi|452209559|ref|YP_007489673.1| - 0.013 15.1 1.5 0.02 14.5 1.1 1.3 1 0 0 1 1 1 0 Zinc dependent phospholipase C Apc3 PF12895.2 gi|452209559|ref|YP_007489673.1| - 1.9 8.6 4.9 0.39 10.9 0.3 2.2 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF3316 PF11777.3 gi|452209560|ref|YP_007489674.1| - 0.08 12.7 0.3 0.089 12.5 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) CMV_1a PF12467.3 gi|452209561|ref|YP_007489675.1| - 0.00055 20.3 0.3 0.00091 19.6 0.2 1.3 1 0 0 1 1 1 1 Cucumber mosaic virus 1a protein family GST_N_2 PF13409.1 gi|452209561|ref|YP_007489675.1| - 0.016 15.1 0.1 0.95 9.5 0.0 2.7 3 0 0 3 3 3 0 Glutathione S-transferase, N-terminal domain Unstab_antitox PF09720.5 gi|452209561|ref|YP_007489675.1| - 0.018 14.7 0.1 0.081 12.6 0.0 2.2 2 0 0 2 2 2 0 Putative addiction module component Peptidase_M24 PF00557.19 gi|452209562|ref|YP_007489676.1| - 1.8e-38 132.2 0.0 2.4e-38 131.8 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|452209562|ref|YP_007489676.1| - 2.6e-12 47.3 0.0 4.1e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DUF2284 PF10050.4 gi|452209563|ref|YP_007489677.1| - 2.5e-50 170.3 0.5 2.9e-50 170.1 0.4 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_S8 PF00082.17 gi|452209564|ref|YP_007489678.1| - 9.4e-23 80.7 0.1 4e-18 65.5 0.0 2.2 2 0 0 2 2 2 2 Subtilase family F420_oxidored PF03807.12 gi|452209565|ref|YP_007489679.1| - 1.1e-24 86.5 1.2 1.3e-24 86.3 0.2 1.6 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Ldh_1_N PF00056.18 gi|452209565|ref|YP_007489679.1| - 0.017 14.9 0.1 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|452209565|ref|YP_007489679.1| - 0.018 14.0 0.0 0.026 13.5 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase Shikimate_DH PF01488.15 gi|452209565|ref|YP_007489679.1| - 0.033 14.3 0.6 0.061 13.4 0.1 1.7 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DXP_reductoisom PF02670.11 gi|452209565|ref|YP_007489679.1| - 0.2 12.1 2.2 13 6.3 0.0 2.6 2 1 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Fer4_8 PF13183.1 gi|452209566|ref|YP_007489680.1| - 5.3e-14 51.9 7.7 8.9e-14 51.2 5.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209566|ref|YP_007489680.1| - 2.8e-11 43.5 7.1 4.5e-11 42.9 4.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209566|ref|YP_007489680.1| - 1.1e-08 35.1 5.9 5.9e-08 32.8 4.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209566|ref|YP_007489680.1| - 1.3e-07 31.2 5.9 2.7e-07 30.2 4.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209566|ref|YP_007489680.1| - 4.2e-06 27.0 10.2 7.4e-06 26.2 6.4 1.9 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209566|ref|YP_007489680.1| - 1.2e-05 24.8 9.9 0.0025 17.6 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209566|ref|YP_007489680.1| - 1.3e-05 24.9 4.9 2.3e-05 24.1 3.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452209566|ref|YP_007489680.1| - 0.00021 20.7 12.1 0.02 14.5 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209566|ref|YP_007489680.1| - 0.00052 20.3 12.0 0.0064 16.8 0.7 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209566|ref|YP_007489680.1| - 0.0032 17.6 11.1 0.027 14.7 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452209566|ref|YP_007489680.1| - 0.025 15.1 16.7 0.17 12.4 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209566|ref|YP_007489680.1| - 0.14 12.9 13.3 2.8 8.7 2.4 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain PLAC8 PF04749.12 gi|452209566|ref|YP_007489680.1| - 0.16 12.5 3.3 0.26 11.8 2.3 1.3 1 0 0 1 1 1 0 PLAC8 family Fer4_11 PF13247.1 gi|452209566|ref|YP_007489680.1| - 0.27 11.1 3.6 0.77 9.6 2.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209566|ref|YP_007489680.1| - 0.3 11.0 11.0 0.59 10.1 1.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DUF678 PF05077.7 gi|452209566|ref|YP_007489680.1| - 0.82 9.7 5.7 1.5 8.8 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF678) CCG PF02754.11 gi|452209567|ref|YP_007489681.1| - 4.2e-32 109.9 3.4 4e-19 68.4 0.3 2.2 2 0 0 2 2 2 2 Cysteine-rich domain Prok-RING_4 PF14447.1 gi|452209567|ref|YP_007489681.1| - 0.025 14.1 1.3 0.039 13.4 0.1 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 DUF1284 PF06935.6 gi|452209568|ref|YP_007489682.1| - 3.8e-26 91.2 0.5 5.4e-26 90.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) DDE_Tnp_1_6 PF13751.1 gi|452209568|ref|YP_007489682.1| - 0.23 11.4 2.9 3.9 7.4 0.1 2.2 2 0 0 2 2 2 0 Transposase DDE domain Rdx PF10262.4 gi|452209568|ref|YP_007489682.1| - 0.26 11.3 1.7 0.77 9.8 1.2 1.7 1 0 0 1 1 1 0 Rdx family SlyX PF04102.7 gi|452209569|ref|YP_007489683.1| - 0.0036 17.6 0.1 0.0052 17.1 0.1 1.2 1 0 0 1 1 1 1 SlyX DASH_Spc34 PF08657.5 gi|452209569|ref|YP_007489683.1| - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 Tantalus PF15386.1 gi|452209569|ref|YP_007489683.1| - 5.2 6.9 5.7 13 5.5 4.0 1.9 1 1 0 1 1 1 0 Drosophila Tantalus-like DUF169 PF02596.10 gi|452209570|ref|YP_007489684.1| - 8.2e-67 224.7 0.0 9.2e-67 224.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CbiA PF01656.18 gi|452209571|ref|YP_007489685.1| - 6.3e-25 87.7 0.0 8.3e-25 87.3 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.22 gi|452209571|ref|YP_007489685.1| - 1.1e-11 43.8 13.2 5.5e-07 28.9 1.5 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452209571|ref|YP_007489685.1| - 3e-08 33.8 8.8 0.0016 18.8 1.2 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209571|ref|YP_007489685.1| - 1.4e-07 31.0 13.5 0.0013 18.5 1.5 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209571|ref|YP_007489685.1| - 2.1e-07 30.5 8.7 2.1e-07 30.5 6.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209571|ref|YP_007489685.1| - 6e-07 29.0 16.2 0.00055 19.6 0.7 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209571|ref|YP_007489685.1| - 1.8e-05 25.3 7.9 0.033 14.9 0.8 3.0 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_NifH PF00142.13 gi|452209571|ref|YP_007489685.1| - 0.0001 21.5 1.4 0.01 15.0 0.0 2.5 3 0 0 3 3 3 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_9 PF13187.1 gi|452209571|ref|YP_007489685.1| - 0.00028 21.0 12.5 0.0012 19.0 8.8 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain ParA PF10609.4 gi|452209571|ref|YP_007489685.1| - 0.0004 20.2 0.2 0.00096 18.9 0.2 1.7 1 1 0 1 1 1 1 ParA/MinD ATPase like Fer4_4 PF12800.2 gi|452209571|ref|YP_007489685.1| - 0.00056 20.0 11.2 0.11 12.8 1.7 3.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209571|ref|YP_007489685.1| - 0.00057 19.6 10.9 0.00057 19.6 7.6 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain FTHFS PF01268.14 gi|452209571|ref|YP_007489685.1| - 0.00059 17.9 0.0 0.00087 17.4 0.0 1.1 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase AAA_19 PF13245.1 gi|452209571|ref|YP_007489685.1| - 0.00067 19.3 0.5 0.65 9.7 0.1 2.5 2 0 0 2 2 2 2 Part of AAA domain Fer4_15 PF13459.1 gi|452209571|ref|YP_007489685.1| - 0.0011 19.4 8.3 0.19 12.3 1.1 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|452209571|ref|YP_007489685.1| - 0.0047 16.9 13.0 0.33 11.0 8.8 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain ArsA_ATPase PF02374.10 gi|452209571|ref|YP_007489685.1| - 0.015 14.3 0.4 0.03 13.3 0.3 1.5 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_25 PF13481.1 gi|452209571|ref|YP_007489685.1| - 0.018 14.4 0.2 0.62 9.4 0.5 2.2 2 0 0 2 2 2 0 AAA domain Fer4_17 PF13534.1 gi|452209571|ref|YP_007489685.1| - 0.019 15.2 11.7 0.34 11.2 1.0 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain AAA_16 PF13191.1 gi|452209571|ref|YP_007489685.1| - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 gi|452209571|ref|YP_007489685.1| - 0.048 13.9 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.1 gi|452209571|ref|YP_007489685.1| - 0.049 14.4 1.4 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|452209571|ref|YP_007489685.1| - 0.05 13.7 0.0 0.8 9.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|452209571|ref|YP_007489685.1| - 0.087 12.4 0.1 0.2 11.2 0.0 1.7 2 0 0 2 2 1 0 NACHT domain AAA_13 PF13166.1 gi|452209571|ref|YP_007489685.1| - 0.16 10.3 0.0 0.23 9.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain Herpeto_peptide PF14409.1 gi|452209571|ref|YP_007489685.1| - 0.16 11.7 1.5 0.24 11.1 0.2 1.9 2 0 0 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon Fer4_18 PF13746.1 gi|452209571|ref|YP_007489685.1| - 0.81 10.1 12.0 4.2 7.8 1.1 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452209571|ref|YP_007489685.1| - 1 9.7 13.1 3.5 8.0 1.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452209571|ref|YP_007489685.1| - 1.1 10.0 23.7 0.34 11.5 2.3 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain CbiA PF01656.18 gi|452209572|ref|YP_007489686.1| - 2.4e-26 92.3 0.0 3.6e-26 91.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.22 gi|452209572|ref|YP_007489686.1| - 8.4e-11 40.9 14.2 8.4e-06 25.1 1.4 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452209572|ref|YP_007489686.1| - 3.8e-08 32.8 14.0 3e-05 23.6 0.8 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209572|ref|YP_007489686.1| - 2.4e-06 27.2 15.9 4.1e-05 23.3 6.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209572|ref|YP_007489686.1| - 7.1e-06 25.7 5.0 1.8e-05 24.4 3.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209572|ref|YP_007489686.1| - 1.3e-05 25.3 8.1 0.016 15.4 0.5 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452209572|ref|YP_007489686.1| - 4.2e-05 23.8 30.2 0.00064 20.0 7.9 2.6 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209572|ref|YP_007489686.1| - 0.00042 20.9 9.3 0.0011 19.6 0.3 2.8 3 0 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_NifH PF00142.13 gi|452209572|ref|YP_007489686.1| - 0.00069 18.8 0.0 0.2 10.8 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.1 gi|452209572|ref|YP_007489686.1| - 0.00072 19.0 0.0 0.002 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.1 gi|452209572|ref|YP_007489686.1| - 0.0016 18.0 0.0 0.043 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_2 PF12797.2 gi|452209572|ref|YP_007489686.1| - 0.003 17.3 15.0 0.024 14.5 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain AAA_19 PF13245.1 gi|452209572|ref|YP_007489686.1| - 0.0035 17.0 0.1 0.067 12.9 0.0 2.6 3 0 0 3 3 2 1 Part of AAA domain AAA_31 PF13614.1 gi|452209572|ref|YP_007489686.1| - 0.0036 17.2 0.0 0.013 15.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|452209572|ref|YP_007489686.1| - 0.0048 15.9 0.3 0.0093 15.0 0.2 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.6 gi|452209572|ref|YP_007489686.1| - 0.0095 15.0 0.0 0.013 14.6 0.0 1.1 1 0 0 1 1 1 1 ATPase MipZ Fer4_8 PF13183.1 gi|452209572|ref|YP_007489686.1| - 0.013 15.5 13.8 0.084 12.9 1.5 2.6 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209572|ref|YP_007489686.1| - 0.02 15.2 11.3 8 6.9 1.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209572|ref|YP_007489686.1| - 0.022 15.3 20.8 0.1 13.1 5.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain ParA PF10609.4 gi|452209572|ref|YP_007489686.1| - 0.032 14.1 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 ParA/MinD ATPase like AAA_17 PF13207.1 gi|452209572|ref|YP_007489686.1| - 0.067 14.0 0.0 0.13 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain PhoH PF02562.11 gi|452209572|ref|YP_007489686.1| - 0.074 12.2 0.2 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 PhoH-like protein DUF2075 PF09848.4 gi|452209572|ref|YP_007489686.1| - 0.092 11.6 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.1 gi|452209572|ref|YP_007489686.1| - 0.14 12.4 0.0 1 9.6 0.0 2.2 3 0 0 3 3 3 0 AAA domain Fer4_4 PF12800.2 gi|452209572|ref|YP_007489686.1| - 0.58 10.6 17.6 0.6 10.5 2.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209572|ref|YP_007489686.1| - 4.9 7.6 10.3 0.92 9.9 1.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Nitro_FeMo-Co PF02579.12 gi|452209573|ref|YP_007489687.1| - 3.7e-20 71.7 0.0 5e-20 71.3 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF134 PF02001.11 gi|452209574|ref|YP_007489688.1| - 2e-19 69.4 0.5 2.4e-19 69.1 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_23 PF13384.1 gi|452209574|ref|YP_007489688.1| - 0.00095 18.7 0.2 0.002 17.7 0.1 1.5 1 1 1 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.7 gi|452209574|ref|YP_007489688.1| - 0.0012 18.3 0.1 0.0015 17.9 0.1 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.6 gi|452209574|ref|YP_007489688.1| - 0.0027 17.3 1.2 0.0044 16.7 0.3 1.6 2 0 0 2 2 2 1 ECF sigma factor HTH_31 PF13560.1 gi|452209574|ref|YP_007489688.1| - 0.017 15.2 1.0 0.025 14.7 0.7 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209574|ref|YP_007489688.1| - 0.06 13.0 0.2 0.36 10.5 0.0 2.1 1 1 1 2 2 2 0 HTH domain Sigma70_r4 PF04545.11 gi|452209574|ref|YP_007489688.1| - 0.061 12.6 0.3 0.1 11.9 0.2 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.17 gi|452209574|ref|YP_007489688.1| - 0.075 12.8 0.1 0.2 11.5 0.0 1.8 1 1 0 1 1 1 0 Helix-turn-helix HTH_28 PF13518.1 gi|452209574|ref|YP_007489688.1| - 0.095 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ParA PF10609.4 gi|452209575|ref|YP_007489689.1| - 3e-32 110.3 0.1 5.7e-32 109.4 0.1 1.5 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|452209575|ref|YP_007489689.1| - 1.1e-21 77.1 0.0 1.6e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|452209575|ref|YP_007489689.1| - 2.7e-09 37.1 0.0 1.9e-07 31.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|452209575|ref|YP_007489689.1| - 2.1e-07 30.3 0.1 4.6e-07 29.1 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.6 gi|452209575|ref|YP_007489689.1| - 1.5e-06 27.5 0.0 3e-06 26.4 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.13 gi|452209575|ref|YP_007489689.1| - 2.5e-06 26.9 0.0 3.2e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.1 gi|452209575|ref|YP_007489689.1| - 5.9e-06 25.8 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|452209575|ref|YP_007489689.1| - 0.0015 17.3 0.2 0.0025 16.6 0.1 1.4 1 0 0 1 1 1 1 ArgK protein DUF258 PF03193.11 gi|452209575|ref|YP_007489689.1| - 0.0059 15.8 0.1 0.012 14.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_19 PF13245.1 gi|452209575|ref|YP_007489689.1| - 0.0068 16.1 2.5 0.064 13.0 0.2 2.6 2 1 0 2 2 2 1 Part of AAA domain YhjQ PF06564.7 gi|452209575|ref|YP_007489689.1| - 0.0092 15.3 0.1 0.67 9.2 0.1 2.1 2 0 0 2 2 2 1 YhjQ protein SRP54 PF00448.17 gi|452209575|ref|YP_007489689.1| - 0.012 15.0 0.2 0.022 14.2 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|452209575|ref|YP_007489689.1| - 0.016 14.6 0.2 0.026 13.9 0.1 1.2 1 0 0 1 1 1 0 AAA-like domain VirC1 PF07015.6 gi|452209575|ref|YP_007489689.1| - 0.025 13.6 0.1 0.043 12.8 0.0 1.2 1 0 0 1 1 1 0 VirC1 protein APS_kinase PF01583.15 gi|452209575|ref|YP_007489689.1| - 0.026 14.1 0.1 0.047 13.3 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase zinc_ribbon_2 PF13240.1 gi|452209575|ref|YP_007489689.1| - 0.035 13.5 1.5 0.044 13.2 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain AAA_26 PF13500.1 gi|452209575|ref|YP_007489689.1| - 0.041 13.4 0.7 0.73 9.4 0.1 2.3 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|452209575|ref|YP_007489689.1| - 0.043 13.5 0.1 0.085 12.5 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|452209575|ref|YP_007489689.1| - 0.046 12.5 0.2 0.093 11.5 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain zf-ribbon_3 PF13248.1 gi|452209575|ref|YP_007489689.1| - 0.24 10.6 1.5 0.34 10.1 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin PF00085.15 gi|452209576|ref|YP_007489690.1| - 1.5e-14 53.5 0.0 2e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.1 gi|452209576|ref|YP_007489690.1| - 7.6e-05 22.6 0.0 0.00014 21.7 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|452209576|ref|YP_007489690.1| - 0.00041 20.5 0.0 0.00074 19.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|452209576|ref|YP_007489690.1| - 0.00041 20.4 0.0 0.00078 19.5 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.5 gi|452209576|ref|YP_007489690.1| - 0.0023 17.4 0.0 0.003 17.1 0.0 1.4 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.16 gi|452209576|ref|YP_007489690.1| - 0.013 15.1 0.0 0.02 14.5 0.0 1.5 1 1 0 1 1 1 0 AhpC/TSA family DUF836 PF05768.9 gi|452209576|ref|YP_007489690.1| - 0.02 15.1 0.0 0.036 14.3 0.0 1.6 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_9 PF14595.1 gi|452209576|ref|YP_007489690.1| - 0.021 14.3 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin DIM1 PF02966.11 gi|452209576|ref|YP_007489690.1| - 0.026 14.0 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 TraF PF13728.1 gi|452209576|ref|YP_007489690.1| - 0.036 13.5 0.0 0.093 12.2 0.0 1.7 2 0 0 2 2 2 0 F plasmid transfer operon protein Lipase_bact_N PF12262.3 gi|452209576|ref|YP_007489690.1| - 0.057 12.6 0.1 0.088 12.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal DUF2847 PF11009.3 gi|452209576|ref|YP_007489690.1| - 0.068 12.7 0.0 0.12 11.9 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) DsbD PF02683.10 gi|452209577|ref|YP_007489691.1| - 4.2e-39 134.3 22.7 5e-39 134.0 15.7 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|452209577|ref|YP_007489691.1| - 1.2e-14 54.5 22.7 1.6e-14 54.1 15.7 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF3899 PF13038.1 gi|452209577|ref|YP_007489691.1| - 0.51 10.5 6.5 2.5 8.3 0.4 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) MerE PF05052.7 gi|452209577|ref|YP_007489691.1| - 0.76 9.7 7.4 0.5 10.3 0.2 2.9 1 1 2 3 3 3 0 MerE protein CAAD PF14159.1 gi|452209577|ref|YP_007489691.1| - 1.8 8.2 8.5 1.9 8.1 0.8 3.4 2 2 2 4 4 4 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase CbiC PF02570.10 gi|452209578|ref|YP_007489692.1| - 8.1e-62 208.1 0.7 9.7e-62 207.9 0.5 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase Reductase_C PF14759.1 gi|452209578|ref|YP_007489692.1| - 0.098 12.9 0.0 4.2 7.7 0.0 2.7 3 0 0 3 3 3 0 Reductase C-terminal TP_methylase PF00590.15 gi|452209579|ref|YP_007489693.1| - 2e-34 119.1 0.3 2.3e-34 118.9 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DAGK_cat PF00781.19 gi|452209579|ref|YP_007489693.1| - 0.031 13.7 0.1 0.9 8.9 0.1 2.2 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain TP_methylase PF00590.15 gi|452209580|ref|YP_007489694.1| - 1.6e-42 145.6 0.1 1.8e-42 145.4 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|452209580|ref|YP_007489694.1| - 0.015 15.4 0.1 0.053 13.6 0.1 1.9 1 1 0 1 1 1 0 Radical SAM superfamily TP_methylase PF00590.15 gi|452209581|ref|YP_007489695.1| - 4e-34 118.1 0.0 2e-33 115.8 0.0 1.8 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HMGL-like PF00682.14 gi|452209582|ref|YP_007489696.1| - 8.1e-33 114.0 0.0 1.2e-32 113.4 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Iso_dh PF00180.15 gi|452209583|ref|YP_007489697.1| - 1.5e-83 280.5 0.0 1.9e-83 280.3 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Acetyltransf_CG PF14542.1 gi|452209583|ref|YP_007489697.1| - 0.019 14.8 0.0 0.32 10.9 0.0 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase TatD_DNase PF01026.16 gi|452209584|ref|YP_007489698.1| - 7.3e-26 90.9 0.0 8.9e-26 90.6 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase CBS PF00571.23 gi|452209584|ref|YP_007489698.1| - 0.071 12.9 0.4 18 5.2 0.0 3.4 3 1 1 4 4 4 0 CBS domain HTH_3 PF01381.17 gi|452209585|ref|YP_007489699.1| - 7.1e-10 38.5 1.1 1.1e-09 38.0 0.7 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|452209585|ref|YP_007489699.1| - 9.5e-09 35.1 0.6 9.5e-09 35.1 0.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|452209585|ref|YP_007489699.1| - 2.2e-08 34.1 0.0 3.3e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|452209585|ref|YP_007489699.1| - 1e-05 25.0 0.9 1.6e-05 24.4 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|452209585|ref|YP_007489699.1| - 0.078 12.7 0.5 0.15 11.8 0.2 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Arc_trans_TRASH PF08394.5 gi|452209585|ref|YP_007489699.1| - 0.15 12.2 2.0 0.37 10.9 1.4 1.7 1 0 0 1 1 1 0 Archaeal TRASH domain AAA PF00004.24 gi|452209586|ref|YP_007489700.1| - 4.1e-44 149.9 0.2 1.9e-43 147.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|452209586|ref|YP_007489700.1| - 7.1e-09 35.5 0.7 2.5e-08 33.7 0.1 2.2 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|452209586|ref|YP_007489700.1| - 6.8e-07 29.4 0.6 1.6e-05 25.0 0.1 2.6 2 1 0 2 2 2 1 AAA ATPase domain DUF815 PF05673.8 gi|452209586|ref|YP_007489700.1| - 1.1e-06 27.7 0.0 2.4e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.9 gi|452209586|ref|YP_007489700.1| - 9.6e-06 25.6 0.5 2.3e-05 24.3 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|452209586|ref|YP_007489700.1| - 8.4e-05 22.7 2.7 0.0018 18.4 0.5 2.9 2 1 0 2 2 2 1 AAA domain Filament PF00038.16 gi|452209586|ref|YP_007489700.1| - 0.00029 20.4 1.5 0.00029 20.4 1.1 1.8 2 0 0 2 2 2 1 Intermediate filament protein AAA_19 PF13245.1 gi|452209586|ref|YP_007489700.1| - 0.00038 20.1 0.4 0.0013 18.4 0.3 1.9 1 1 0 1 1 1 1 Part of AAA domain RuvB_N PF05496.7 gi|452209586|ref|YP_007489700.1| - 0.00039 19.5 0.0 0.00088 18.3 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_17 PF13207.1 gi|452209586|ref|YP_007489700.1| - 0.00052 20.8 0.0 0.0017 19.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain KaiC PF06745.8 gi|452209586|ref|YP_007489700.1| - 0.0014 17.7 2.3 0.12 11.4 0.0 3.1 2 1 1 3 3 3 1 KaiC CCDC144C PF14915.1 gi|452209586|ref|YP_007489700.1| - 0.0025 16.8 2.6 0.0044 15.9 1.8 1.3 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region AAA_28 PF13521.1 gi|452209586|ref|YP_007489700.1| - 0.0032 17.4 0.0 0.0064 16.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|452209586|ref|YP_007489700.1| - 0.0037 17.1 0.1 0.0084 15.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|452209586|ref|YP_007489700.1| - 0.0038 17.1 0.0 0.011 15.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain Tropomyosin_1 PF12718.2 gi|452209586|ref|YP_007489700.1| - 0.004 17.0 3.1 0.004 17.0 2.2 2.2 3 0 0 3 3 2 1 Tropomyosin like AAA_18 PF13238.1 gi|452209586|ref|YP_007489700.1| - 0.0041 17.4 0.7 0.023 15.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_3 PF07726.6 gi|452209586|ref|YP_007489700.1| - 0.0044 16.6 0.0 0.0092 15.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Phage_GP20 PF06810.6 gi|452209586|ref|YP_007489700.1| - 0.0062 15.9 1.6 0.06 12.7 0.0 2.3 2 0 0 2 2 2 1 Phage minor structural protein GP20 IstB_IS21 PF01695.12 gi|452209586|ref|YP_007489700.1| - 0.0097 15.3 0.3 0.032 13.6 0.0 1.9 2 0 0 2 2 1 1 IstB-like ATP binding protein ADIP PF11559.3 gi|452209586|ref|YP_007489700.1| - 0.014 15.2 2.0 0.031 14.1 1.4 1.5 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Sigma54_activat PF00158.21 gi|452209586|ref|YP_007489700.1| - 0.017 14.6 0.1 0.42 10.0 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_25 PF13481.1 gi|452209586|ref|YP_007489700.1| - 0.025 14.0 3.4 0.44 9.9 0.1 2.9 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.7 gi|452209586|ref|YP_007489700.1| - 0.025 13.6 1.3 0.037 13.1 0.0 1.9 2 1 0 2 2 2 0 Zeta toxin APG6 PF04111.7 gi|452209586|ref|YP_007489700.1| - 0.026 13.5 0.2 0.061 12.3 0.1 1.5 1 0 0 1 1 1 0 Autophagy protein Apg6 Sigma54_activ_2 PF14532.1 gi|452209586|ref|YP_007489700.1| - 0.026 14.5 0.0 0.27 11.3 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain Arch_ATPase PF01637.13 gi|452209586|ref|YP_007489700.1| - 0.032 13.9 2.8 0.35 10.5 0.1 3.1 2 1 0 2 2 2 0 Archaeal ATPase Tektin PF03148.9 gi|452209586|ref|YP_007489700.1| - 0.037 12.5 5.7 0.029 12.9 1.9 2.1 2 0 0 2 2 2 0 Tektin family bZIP_2 PF07716.10 gi|452209586|ref|YP_007489700.1| - 0.046 13.5 0.4 0.046 13.5 0.3 3.1 2 1 1 3 3 2 0 Basic region leucine zipper Mg_chelatase PF01078.16 gi|452209586|ref|YP_007489700.1| - 0.057 12.5 0.0 0.16 11.1 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Syntaxin-6_N PF09177.6 gi|452209586|ref|YP_007489700.1| - 0.074 13.4 1.0 8.7 6.8 0.0 2.8 2 0 0 2 2 2 0 Syntaxin 6, N-terminal NB-ARC PF00931.17 gi|452209586|ref|YP_007489700.1| - 0.075 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|452209586|ref|YP_007489700.1| - 0.1 12.1 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|452209586|ref|YP_007489700.1| - 0.17 12.1 1.3 3.4 7.9 0.0 2.9 3 1 0 3 3 3 0 ABC transporter V-SNARE PF05008.10 gi|452209586|ref|YP_007489700.1| - 0.18 11.9 5.1 0.64 10.2 3.5 1.9 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus IncA PF04156.9 gi|452209586|ref|YP_007489700.1| - 0.21 11.1 5.7 0.26 10.8 2.0 2.1 2 0 0 2 2 2 0 IncA protein Transposase_22 PF02994.9 gi|452209586|ref|YP_007489700.1| - 0.3 9.5 5.3 0.65 8.4 1.5 2.3 2 0 0 2 2 2 0 L1 transposable element Nsp1_C PF05064.8 gi|452209586|ref|YP_007489700.1| - 0.34 10.5 2.5 0.97 9.0 1.8 1.7 1 0 0 1 1 1 0 Nsp1-like C-terminal region XhlA PF10779.4 gi|452209586|ref|YP_007489700.1| - 0.81 9.6 3.0 0.94 9.4 0.5 2.3 2 0 0 2 2 2 0 Haemolysin XhlA CCDC155 PF14662.1 gi|452209586|ref|YP_007489700.1| - 2.3 7.7 9.8 0.86 9.1 2.7 2.7 3 0 0 3 3 2 0 Coiled-coil region of CCDC155 DUF99 PF01949.11 gi|452209587|ref|YP_007489701.1| - 1.6e-72 242.5 0.3 1.8e-72 242.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 CutC PF03932.9 gi|452209587|ref|YP_007489701.1| - 0.031 13.5 0.2 0.68 9.1 0.0 2.1 2 0 0 2 2 2 0 CutC family ODC_AZ PF02100.12 gi|452209587|ref|YP_007489701.1| - 0.12 11.8 0.0 0.31 10.5 0.0 1.6 1 1 1 2 2 2 0 Ornithine decarboxylase antizyme Tubulin PF00091.20 gi|452209588|ref|YP_007489702.1| - 2.1e-35 122.5 4.6 2.2e-35 122.4 1.0 2.4 2 1 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|452209588|ref|YP_007489702.1| - 2.4e-35 120.4 1.0 7.5e-35 118.8 0.7 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain SecE PF00584.15 gi|452209589|ref|YP_007489703.1| - 0.03 13.8 0.1 0.036 13.6 0.1 1.2 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex Tox-WTIP PF15654.1 gi|452209589|ref|YP_007489703.1| - 0.11 12.1 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif UCR_Fe-S_N PF10399.4 gi|452209589|ref|YP_007489703.1| - 0.22 10.7 0.8 0.53 9.4 0.2 1.9 2 1 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Spt5-NGN PF03439.8 gi|452209590|ref|YP_007489704.1| - 3.8e-25 87.4 0.1 5.6e-25 86.9 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|452209590|ref|YP_007489704.1| - 1.8e-06 27.4 1.0 1.5e-05 24.4 0.2 2.3 2 0 0 2 2 2 1 KOW motif NusG PF02357.14 gi|452209590|ref|YP_007489704.1| - 0.00068 19.8 0.0 0.0023 18.1 0.0 1.9 1 1 0 1 1 1 1 Transcription termination factor nusG Ribosomal_L11_N PF03946.9 gi|452209591|ref|YP_007489705.1| - 5e-26 89.9 1.8 5e-26 89.9 1.3 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|452209591|ref|YP_007489705.1| - 4.7e-23 81.1 0.6 4.7e-23 81.1 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain CTDII PF01556.13 gi|452209591|ref|YP_007489705.1| - 0.03 14.2 0.4 0.054 13.3 0.3 1.4 1 0 0 1 1 1 0 DnaJ C terminal domain HGTP_anticodon PF03129.15 gi|452209591|ref|YP_007489705.1| - 0.064 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Anticodon binding domain DUF1351 PF07083.6 gi|452209591|ref|YP_007489705.1| - 0.091 12.3 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) Ribosomal_L1 PF00687.16 gi|452209592|ref|YP_007489706.1| - 1.7e-46 158.3 0.3 1.9e-46 158.1 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.15 gi|452209593|ref|YP_007489707.1| - 1.8e-22 79.1 0.2 4.2e-22 77.9 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.14 gi|452209593|ref|YP_007489707.1| - 4.3e-09 36.6 25.6 4.3e-09 36.6 17.7 2.9 3 1 0 3 3 3 1 60s Acidic ribosomal protein Lipase_GDSL_2 PF13472.1 gi|452209593|ref|YP_007489707.1| - 0.084 12.9 0.1 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family UCR_Fe-S_N PF10399.4 gi|452209593|ref|YP_007489707.1| - 0.25 10.5 3.2 0.49 9.5 2.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Brevenin PF03032.10 gi|452209593|ref|YP_007489707.1| - 7.7 6.4 7.9 17 5.3 5.5 1.5 1 0 0 1 1 1 0 Brevenin/esculentin/gaegurin/rugosin family Ribosomal_60s PF00428.14 gi|452209594|ref|YP_007489708.1| - 9.1e-13 48.4 14.5 1.4e-12 47.8 10.0 1.3 1 0 0 1 1 1 1 60s Acidic ribosomal protein Radical_SAM PF04055.16 gi|452209595|ref|YP_007489709.1| - 6e-15 55.7 0.1 1.5e-14 54.5 0.0 1.7 1 1 1 2 2 2 1 Radical SAM superfamily UPF0150 PF03681.10 gi|452209595|ref|YP_007489709.1| - 1.4e-06 27.8 0.1 3.9e-06 26.3 0.1 1.8 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) SPASM PF13186.1 gi|452209595|ref|YP_007489709.1| - 0.00028 21.1 0.6 0.0017 18.6 0.2 2.5 2 1 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|452209595|ref|YP_007489709.1| - 0.0017 18.5 0.0 0.0055 16.8 0.0 1.9 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452209595|ref|YP_007489709.1| - 0.012 15.6 0.0 0.035 14.1 0.0 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain SAM_adeno_trans PF01887.11 gi|452209596|ref|YP_007489710.1| - 8.7e-87 290.4 0.1 9.9e-87 290.2 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase DUF1616 PF07760.6 gi|452209597|ref|YP_007489711.1| - 1.5e-31 109.6 0.0 1.7e-31 109.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Fer4 PF00037.22 gi|452209598|ref|YP_007489712.1| - 0.013 15.1 1.7 0.013 15.1 1.2 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209598|ref|YP_007489712.1| - 0.05 14.3 5.1 0.18 12.5 3.5 1.9 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|452209598|ref|YP_007489712.1| - 0.21 11.9 6.8 0.47 10.8 4.7 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209598|ref|YP_007489712.1| - 1.3 9.3 7.4 3 8.1 5.1 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain DNA_binding_1 PF01035.15 gi|452209599|ref|YP_007489713.1| - 6.8e-31 105.8 0.0 9.6e-31 105.3 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.10 gi|452209599|ref|YP_007489713.1| - 7.6e-08 32.8 0.0 1.3e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DUF4367 PF14285.1 gi|452209602|ref|YP_007489716.1| - 8.2e-13 48.0 9.9 8.7e-13 47.9 4.5 2.6 2 1 0 2 2 2 1 Domain of unknown function (DUF4367) DUF1571 PF07608.6 gi|452209602|ref|YP_007489716.1| - 0.00017 20.7 0.0 0.00035 19.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) DUF1329 PF07044.6 gi|452209602|ref|YP_007489716.1| - 0.022 13.7 0.0 0.04 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) ThiC PF01964.13 gi|452209603|ref|YP_007489717.1| - 1.3e-181 603.7 0.2 1.5e-181 603.5 0.1 1.0 1 0 0 1 1 1 1 ThiC family Glycos_transf_2 PF00535.21 gi|452209604|ref|YP_007489718.1| - 1.2e-16 60.9 0.0 1.7e-16 60.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209604|ref|YP_007489718.1| - 4.3e-06 26.6 0.0 6.1e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452209604|ref|YP_007489718.1| - 0.0083 16.4 0.0 0.014 15.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 CBS PF00571.23 gi|452209604|ref|YP_007489718.1| - 0.026 14.2 0.0 0.062 13.0 0.0 1.6 1 0 0 1 1 1 0 CBS domain DUF1600 PF07667.6 gi|452209604|ref|YP_007489718.1| - 0.25 11.4 3.8 0.46 10.6 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) DUF2422 PF10337.4 gi|452209604|ref|YP_007489718.1| - 0.57 8.9 4.9 0.77 8.4 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2422) TBP PF00352.16 gi|452209605|ref|YP_007489719.1| - 8.4e-64 210.9 0.1 3.4e-31 106.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|452209605|ref|YP_007489719.1| - 1.1e-05 25.4 0.0 0.18 11.9 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|452209605|ref|YP_007489719.1| - 0.0026 17.1 0.0 0.72 9.3 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF3252) TBP PF00352.16 gi|452209606|ref|YP_007489720.1| - 3.6e-65 215.3 0.2 6e-32 108.8 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|452209606|ref|YP_007489720.1| - 6e-06 26.2 0.0 0.13 12.3 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|452209606|ref|YP_007489720.1| - 0.0025 17.1 0.0 0.71 9.3 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3252) DUF387 PF04079.11 gi|452209607|ref|YP_007489721.1| - 1.9e-39 134.6 0.0 5.2e-39 133.1 0.0 1.7 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_15 PF12324.3 gi|452209607|ref|YP_007489721.1| - 0.0023 17.5 0.0 0.033 13.8 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain of alkylmercury lyase HTH_20 PF12840.2 gi|452209607|ref|YP_007489721.1| - 0.017 14.9 0.0 3 7.6 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3150 PF11348.3 gi|452209607|ref|YP_007489721.1| - 0.043 12.8 0.1 0.083 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) TrmB PF01978.14 gi|452209607|ref|YP_007489721.1| - 0.07 12.8 0.0 2 8.1 0.0 2.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB SMC_N PF02463.14 gi|452209608|ref|YP_007489722.1| - 9.8e-71 237.4 0.0 1.8e-70 236.5 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.8 gi|452209608|ref|YP_007489722.1| - 7.8e-34 116.2 0.1 7.7e-33 113.0 0.0 2.7 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.1 gi|452209608|ref|YP_007489722.1| - 7e-14 52.6 20.2 7e-14 52.6 14.0 6.7 2 2 1 3 3 3 1 AAA domain AAA_21 PF13304.1 gi|452209608|ref|YP_007489722.1| - 6.3e-07 29.6 3.0 3.2e-05 24.0 0.2 4.9 4 2 0 4 4 4 2 AAA domain AAA_29 PF13555.1 gi|452209608|ref|YP_007489722.1| - 6.7e-07 28.7 0.0 1.5e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain BLOC1_2 PF10046.4 gi|452209608|ref|YP_007489722.1| - 0.027 14.6 0.1 0.027 14.6 0.1 9.5 5 3 4 10 10 10 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF869 PF05911.6 gi|452209608|ref|YP_007489722.1| - 0.34 9.0 82.0 0.0089 14.3 8.6 3.8 2 2 1 3 3 3 0 Plant protein of unknown function (DUF869) ABC_tran PF00005.22 gi|452209608|ref|YP_007489722.1| - 1.9 8.7 0.0 1.9 8.7 0.0 5.2 3 2 0 3 3 3 0 ABC transporter Reo_sigmaC PF04582.7 gi|452209608|ref|YP_007489722.1| - 5.6 6.0 32.5 5.2 6.1 2.4 4.9 2 2 0 4 4 4 0 Reovirus sigma C capsid protein Tektin PF03148.9 gi|452209609|ref|YP_007489723.1| - 0.00022 19.9 0.6 0.00031 19.4 0.4 1.3 1 0 0 1 1 1 1 Tektin family Siah-Interact_N PF09032.6 gi|452209609|ref|YP_007489723.1| - 0.12 12.4 1.7 0.2 11.7 0.1 2.2 3 0 0 3 3 3 0 Siah interacting protein, N terminal Tup_N PF08581.5 gi|452209609|ref|YP_007489723.1| - 0.57 10.4 3.8 0.52 10.5 1.0 2.2 2 1 0 2 2 2 0 Tup N-terminal FeoB_N PF02421.13 gi|452209610|ref|YP_007489724.1| - 4e-56 188.6 0.3 6.5e-56 187.9 0.2 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|452209610|ref|YP_007489724.1| - 1.4e-27 95.7 27.5 4.7e-15 55.4 5.1 3.1 4 0 0 4 4 4 2 Nucleoside recognition FeoB_C PF07664.7 gi|452209610|ref|YP_007489724.1| - 1.7e-16 59.3 0.6 1.7e-16 59.3 0.4 3.8 4 0 0 4 4 4 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.18 gi|452209610|ref|YP_007489724.1| - 4.7e-16 58.7 0.1 8.3e-16 57.9 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.11 gi|452209610|ref|YP_007489724.1| - 0.00014 21.0 0.0 0.00022 20.4 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.18 gi|452209610|ref|YP_007489724.1| - 0.0037 17.0 1.0 0.035 13.9 0.0 2.2 1 1 1 2 2 2 1 Dynamin family Miro PF08477.8 gi|452209610|ref|YP_007489724.1| - 0.0048 17.3 0.0 0.0087 16.5 0.0 1.4 1 0 0 1 1 1 1 Miro-like protein ATP_bind_1 PF03029.12 gi|452209610|ref|YP_007489724.1| - 0.0067 16.0 0.4 0.019 14.4 0.1 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein SRPRB PF09439.5 gi|452209610|ref|YP_007489724.1| - 0.036 13.2 0.0 0.061 12.5 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Fe_dep_repr_C PF02742.10 gi|452209611|ref|YP_007489725.1| - 1.4e-28 98.4 0.9 4.1e-28 96.8 0.2 2.1 2 1 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|452209611|ref|YP_007489725.1| - 2e-22 78.8 0.8 7.4e-22 77.0 0.3 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.9 gi|452209611|ref|YP_007489725.1| - 2.9e-15 55.9 0.7 4.8e-14 52.0 0.2 2.4 2 1 0 2 2 2 1 FeoA domain HTH_24 PF13412.1 gi|452209611|ref|YP_007489725.1| - 2e-07 30.2 0.0 1.8e-06 27.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|452209611|ref|YP_007489725.1| - 3.5e-07 29.8 0.0 1.1e-06 28.2 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|452209611|ref|YP_007489725.1| - 1e-06 28.2 0.0 3e-06 26.7 0.0 1.9 2 0 0 2 2 1 1 HTH domain HTH_27 PF13463.1 gi|452209611|ref|YP_007489725.1| - 1.7e-06 28.2 0.0 4.4e-06 26.9 0.0 1.7 2 0 0 2 2 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452209611|ref|YP_007489725.1| - 1.9e-06 27.4 0.1 3.8e-06 26.5 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|452209611|ref|YP_007489725.1| - 5.8e-06 25.8 0.0 1.4e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_12 PF08461.5 gi|452209611|ref|YP_007489725.1| - 7.1e-06 25.6 0.0 1.9e-05 24.2 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_5 PF01022.15 gi|452209611|ref|YP_007489725.1| - 9.8e-05 21.9 0.0 0.00018 21.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2250 PF10007.4 gi|452209611|ref|YP_007489725.1| - 0.00012 21.9 0.7 0.00022 21.0 0.5 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HrcA_DNA-bdg PF03444.10 gi|452209611|ref|YP_007489725.1| - 0.00013 21.3 0.1 0.00027 20.2 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LexA_DNA_bind PF01726.11 gi|452209611|ref|YP_007489725.1| - 0.00014 21.3 0.0 0.00034 20.1 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain Rrf2 PF02082.15 gi|452209611|ref|YP_007489725.1| - 0.00017 21.6 0.1 0.00072 19.6 0.0 2.1 1 1 0 2 2 2 1 Transcriptional regulator HTH_6 PF01418.12 gi|452209611|ref|YP_007489725.1| - 0.00029 20.5 0.0 0.00056 19.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family HTH_IclR PF09339.5 gi|452209611|ref|YP_007489725.1| - 0.00053 19.5 0.0 0.00097 18.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.16 gi|452209611|ref|YP_007489725.1| - 0.0026 17.1 0.0 0.0071 15.7 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_45 PF14947.1 gi|452209611|ref|YP_007489725.1| - 0.0028 17.4 0.2 0.0049 16.6 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix FeoC PF09012.5 gi|452209611|ref|YP_007489725.1| - 0.008 15.8 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF4423 PF14394.1 gi|452209611|ref|YP_007489725.1| - 0.008 15.7 0.1 0.015 14.8 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_AsnC-type PF13404.1 gi|452209611|ref|YP_007489725.1| - 0.019 14.4 0.0 0.044 13.3 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|452209611|ref|YP_007489725.1| - 0.026 14.3 0.0 0.051 13.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.1 gi|452209611|ref|YP_007489725.1| - 0.032 14.2 0.0 0.076 13.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.7 gi|452209611|ref|YP_007489725.1| - 0.049 13.8 0.0 0.099 12.8 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein TFIIE_alpha PF02002.12 gi|452209611|ref|YP_007489725.1| - 0.059 12.8 0.0 0.14 11.7 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit DUF4093 PF13331.1 gi|452209611|ref|YP_007489725.1| - 0.067 13.4 0.0 4.9 7.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4093) HTH_23 PF13384.1 gi|452209611|ref|YP_007489725.1| - 0.069 12.8 0.0 0.19 11.4 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.7 gi|452209611|ref|YP_007489725.1| - 0.074 12.6 0.0 0.21 11.2 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain HTH_1 PF00126.22 gi|452209611|ref|YP_007489725.1| - 0.084 12.6 0.0 0.4 10.4 0.0 2.2 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family IF2_N PF04760.10 gi|452209611|ref|YP_007489725.1| - 0.084 12.5 0.1 0.36 10.5 0.0 2.1 2 0 0 2 2 1 0 Translation initiation factor IF-2, N-terminal region GLTP PF08718.6 gi|452209611|ref|YP_007489725.1| - 0.091 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) PRCH PF03967.8 gi|452209612|ref|YP_007489726.1| - 0.057 12.9 0.3 0.065 12.8 0.2 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region Acetyltransf_1 PF00583.19 gi|452209613|ref|YP_007489727.1| - 3e-11 43.1 0.0 4e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452209613|ref|YP_007489727.1| - 3.9e-09 36.5 0.0 6e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452209613|ref|YP_007489727.1| - 8.7e-09 35.5 0.0 1.1e-08 35.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452209613|ref|YP_007489727.1| - 5.4e-05 23.0 0.0 0.00019 21.2 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452209613|ref|YP_007489727.1| - 0.00011 22.1 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452209613|ref|YP_007489727.1| - 0.00082 19.5 0.0 0.00093 19.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452209613|ref|YP_007489727.1| - 0.005 16.6 0.0 0.007 16.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.5 gi|452209613|ref|YP_007489727.1| - 0.0087 15.7 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.1 gi|452209613|ref|YP_007489727.1| - 0.032 14.1 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF4413 PF14372.1 gi|452209613|ref|YP_007489727.1| - 0.14 12.1 0.1 0.23 11.4 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4413) Oxidored_q3 PF00499.15 gi|452209614|ref|YP_007489728.1| - 0.055 13.2 4.8 0.053 13.2 3.3 1.0 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BioY PF02632.9 gi|452209615|ref|YP_007489729.1| - 1.4e-45 154.5 20.3 2.1e-45 154.0 14.1 1.2 1 0 0 1 1 1 1 BioY family ECF-ribofla_trS PF07155.7 gi|452209615|ref|YP_007489729.1| - 0.00067 19.4 1.7 0.00067 19.4 1.2 2.9 2 1 1 3 3 3 1 ECF-type riboflavin transporter, S component Carboxyl_trans PF01039.17 gi|452209615|ref|YP_007489729.1| - 0.026 12.9 1.0 0.034 12.5 0.7 1.1 1 0 0 1 1 1 0 Carboxyl transferase domain DUF3816 PF12822.2 gi|452209615|ref|YP_007489729.1| - 0.057 13.3 19.1 0.079 12.8 13.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) ABC_tran PF00005.22 gi|452209616|ref|YP_007489730.1| - 6.5e-28 97.7 0.0 1e-27 97.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209616|ref|YP_007489730.1| - 6e-10 39.5 0.0 3.7e-07 30.3 0.0 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452209616|ref|YP_007489730.1| - 6.5e-10 38.6 0.3 1.8e-08 33.9 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452209616|ref|YP_007489730.1| - 0.002 17.2 0.0 0.15 11.0 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.2 gi|452209616|ref|YP_007489730.1| - 0.003 17.0 0.0 0.18 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA-like domain AAA_29 PF13555.1 gi|452209616|ref|YP_007489730.1| - 0.0084 15.6 0.2 0.017 14.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452209616|ref|YP_007489730.1| - 0.011 15.1 0.0 0.3 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|452209616|ref|YP_007489730.1| - 0.012 15.7 0.1 0.42 10.7 0.1 2.8 2 1 0 2 2 2 0 AAA domain AAA_13 PF13166.1 gi|452209616|ref|YP_007489730.1| - 0.059 11.8 0.1 0.21 9.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|452209616|ref|YP_007489730.1| - 0.06 13.6 0.7 2.8 8.2 0.1 2.5 2 1 0 2 2 2 0 AAA domain Zot PF05707.7 gi|452209616|ref|YP_007489730.1| - 0.068 12.6 0.2 1.4 8.3 0.1 2.4 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) AAA_14 PF13173.1 gi|452209616|ref|YP_007489730.1| - 0.071 13.0 0.0 12 5.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain RecA PF00154.16 gi|452209616|ref|YP_007489730.1| - 0.073 12.1 0.2 4.8 6.1 0.0 2.3 1 1 1 2 2 2 0 recA bacterial DNA recombination protein MobB PF03205.9 gi|452209616|ref|YP_007489730.1| - 0.083 12.5 0.1 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.22 gi|452209617|ref|YP_007489731.1| - 7.8e-31 107.1 0.0 1.5e-30 106.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209617|ref|YP_007489731.1| - 1e-09 38.8 0.1 7.2e-06 26.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain ArgK PF03308.11 gi|452209617|ref|YP_007489731.1| - 4.5e-05 22.3 0.0 0.0001 21.2 0.0 1.5 1 0 0 1 1 1 1 ArgK protein AAA_23 PF13476.1 gi|452209617|ref|YP_007489731.1| - 6.3e-05 23.3 0.0 0.00019 21.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452209617|ref|YP_007489731.1| - 0.00099 18.5 0.0 0.0019 17.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452209617|ref|YP_007489731.1| - 0.0013 18.7 0.1 0.0041 17.1 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.14 gi|452209617|ref|YP_007489731.1| - 0.0095 15.1 0.0 0.12 11.6 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|452209617|ref|YP_007489731.1| - 0.014 14.8 0.1 2.6 7.3 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.1 gi|452209617|ref|YP_007489731.1| - 0.016 15.3 0.0 0.031 14.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|452209617|ref|YP_007489731.1| - 0.02 13.9 0.1 0.53 9.2 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.1 gi|452209617|ref|YP_007489731.1| - 0.044 13.1 0.0 0.57 9.5 0.0 2.6 3 0 0 3 3 3 0 AAA domain SbcCD_C PF13558.1 gi|452209617|ref|YP_007489731.1| - 0.063 13.2 0.0 0.64 9.9 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.1 gi|452209617|ref|YP_007489731.1| - 0.063 12.8 0.0 0.2 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF258 PF03193.11 gi|452209617|ref|YP_007489731.1| - 0.068 12.3 0.0 0.13 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_14 PF13173.1 gi|452209617|ref|YP_007489731.1| - 0.097 12.5 0.0 1.6 8.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain Imm5 PF14423.1 gi|452209617|ref|YP_007489731.1| - 0.12 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Immunity protein Imm5 Miro PF08477.8 gi|452209617|ref|YP_007489731.1| - 0.13 12.7 0.4 0.29 11.6 0.1 1.7 2 0 0 2 2 2 0 Miro-like protein CbiQ PF02361.11 gi|452209618|ref|YP_007489732.1| - 3.7e-37 128.0 9.8 5.1e-37 127.6 6.8 1.1 1 0 0 1 1 1 1 Cobalt transport protein HTH_5 PF01022.15 gi|452209619|ref|YP_007489733.1| - 2.1e-10 40.1 0.4 3.6e-10 39.3 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452209619|ref|YP_007489733.1| - 1e-06 28.4 0.5 1e-06 28.4 0.4 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain Arg_repressor PF01316.16 gi|452209619|ref|YP_007489733.1| - 2.9e-05 23.5 0.0 3.4e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain MarR_2 PF12802.2 gi|452209619|ref|YP_007489733.1| - 0.004 16.7 0.6 0.0084 15.7 0.4 1.5 1 1 0 1 1 1 1 MarR family TrmB PF01978.14 gi|452209619|ref|YP_007489733.1| - 0.0076 15.9 0.0 0.0091 15.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.22 gi|452209619|ref|YP_007489733.1| - 0.014 15.1 0.2 0.036 13.7 0.2 1.7 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF4423 PF14394.1 gi|452209619|ref|YP_007489733.1| - 0.076 12.5 0.0 0.083 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_Crp_2 PF13545.1 gi|452209619|ref|YP_007489733.1| - 0.095 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GntR PF00392.16 gi|452209619|ref|YP_007489733.1| - 0.11 11.8 0.2 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF318 PF03773.8 gi|452209620|ref|YP_007489734.1| - 3.5e-48 164.1 16.8 3.3e-47 160.9 11.6 2.0 1 1 0 1 1 1 1 Predicted permease PspC PF04024.7 gi|452209621|ref|YP_007489735.1| - 6.1e-23 80.0 0.3 7.5e-23 79.7 0.2 1.1 1 0 0 1 1 1 1 PspC domain Aminotran_4 PF01063.14 gi|452209623|ref|YP_007489737.1| - 1.1e-50 172.2 0.0 1.4e-50 171.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class IV MoeA_N PF03453.12 gi|452209624|ref|YP_007489738.1| - 1.3e-54 183.8 0.7 2.2e-54 183.1 0.5 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) PBP_like PF12727.2 gi|452209624|ref|YP_007489738.1| - 1.6e-41 141.3 0.7 4.4e-41 139.9 0.0 1.9 2 0 0 2 2 2 1 PBP superfamily domain MoCF_biosynth PF00994.19 gi|452209624|ref|YP_007489738.1| - 8e-29 99.8 0.1 1.7e-28 98.8 0.0 1.6 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|452209624|ref|YP_007489738.1| - 1.1e-14 54.0 0.0 8.2e-14 51.3 0.0 2.5 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Phosphonate-bd PF12974.2 gi|452209624|ref|YP_007489738.1| - 0.0081 15.5 0.0 0.017 14.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein T2SE PF00437.15 gi|452209624|ref|YP_007489738.1| - 0.081 11.8 0.0 0.14 10.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.18 gi|452209625|ref|YP_007489739.1| - 3.4e-18 65.6 0.1 6.1e-18 64.8 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 gi|452209625|ref|YP_007489739.1| - 1.3e-16 60.1 0.0 2.7e-16 59.1 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|452209625|ref|YP_007489739.1| - 6.1e-12 45.0 0.0 1.9e-11 43.5 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B Miro PF08477.8 gi|452209625|ref|YP_007489739.1| - 0.00075 19.9 0.5 0.0021 18.5 0.0 1.9 2 0 0 2 2 2 1 Miro-like protein Dynamin_N PF00350.18 gi|452209625|ref|YP_007489739.1| - 0.0018 18.1 2.8 0.66 9.7 0.2 3.1 2 1 1 3 3 3 2 Dynamin family DUF258 PF03193.11 gi|452209625|ref|YP_007489739.1| - 0.026 13.7 0.2 0.15 11.2 0.2 2.1 2 1 0 2 2 2 0 Protein of unknown function, DUF258 AIG1 PF04548.11 gi|452209625|ref|YP_007489739.1| - 0.028 13.5 0.6 0.042 12.9 0.0 1.6 2 0 0 2 2 2 0 AIG1 family SRPRB PF09439.5 gi|452209625|ref|YP_007489739.1| - 0.11 11.7 0.0 0.25 10.5 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF1192 PF06698.6 gi|452209625|ref|YP_007489739.1| - 0.12 12.1 0.2 0.12 12.1 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) DUF2106 PF09879.4 gi|452209625|ref|YP_007489739.1| - 0.12 11.6 0.0 0.29 10.4 0.0 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2106) Dala_Dala_lig_C PF07478.8 gi|452209626|ref|YP_007489740.1| - 8.2e-26 90.6 0.0 1.3e-25 90.0 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Methyltransf_25 PF13649.1 gi|452209626|ref|YP_007489740.1| - 2.6e-18 66.2 0.0 4e-17 62.4 0.0 2.5 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209626|ref|YP_007489740.1| - 8.6e-18 64.6 0.0 2e-17 63.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209626|ref|YP_007489740.1| - 2.9e-17 62.6 0.0 5.2e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209626|ref|YP_007489740.1| - 7.5e-17 61.9 0.0 2.2e-16 60.4 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain ATP-grasp_4 PF13535.1 gi|452209626|ref|YP_007489740.1| - 1.4e-16 60.7 0.0 3.2e-15 56.3 0.0 2.5 2 1 0 2 2 2 1 ATP-grasp domain Ubie_methyltran PF01209.13 gi|452209626|ref|YP_007489740.1| - 1.9e-14 53.3 0.0 2.9e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|452209626|ref|YP_007489740.1| - 2.9e-11 43.3 0.0 6.8e-11 42.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452209626|ref|YP_007489740.1| - 2.5e-09 37.1 0.0 1e-08 35.1 0.0 2.1 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452209626|ref|YP_007489740.1| - 3.5e-08 33.8 0.0 9.1e-07 29.2 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain ATPgrasp_Ter PF15632.1 gi|452209626|ref|YP_007489740.1| - 1.2e-07 30.7 0.0 0.011 14.4 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon TehB PF03848.9 gi|452209626|ref|YP_007489740.1| - 6e-06 25.5 0.0 9.1e-06 24.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.9 gi|452209626|ref|YP_007489740.1| - 0.00035 19.9 0.0 0.00065 19.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Pox_MCEL PF03291.11 gi|452209626|ref|YP_007489740.1| - 0.00064 18.6 0.0 0.068 12.0 0.0 2.1 1 1 1 2 2 2 1 mRNA capping enzyme CMAS PF02353.15 gi|452209626|ref|YP_007489740.1| - 0.0012 17.9 0.0 0.0019 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.12 gi|452209626|ref|YP_007489740.1| - 0.0035 16.4 0.0 0.021 13.8 0.0 2.1 2 0 0 2 2 2 1 Putative methyltransferase ATP-grasp_3 PF02655.9 gi|452209626|ref|YP_007489740.1| - 0.024 14.4 0.0 0.064 13.1 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain UPF0020 PF01170.13 gi|452209626|ref|YP_007489740.1| - 0.13 11.8 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 CitMHS PF03600.11 gi|452209628|ref|YP_007489742.1| - 3.7e-30 104.6 25.6 1.5e-29 102.7 12.3 2.1 1 1 1 2 2 2 2 Citrate transporter UPF0150 PF03681.10 gi|452209629|ref|YP_007489743.1| - 1.8e-09 37.0 0.1 2.2e-09 36.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|452209629|ref|YP_007489743.1| - 0.01 15.8 0.0 0.012 15.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) MC1 PF05854.6 gi|452209631|ref|YP_007489745.1| - 1.1e-45 153.5 2.0 1.2e-45 153.4 1.4 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 UPF0150 PF03681.10 gi|452209632|ref|YP_007489746.1| - 3.8e-12 45.6 0.0 4.8e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|452209632|ref|YP_007489746.1| - 0.00097 19.1 0.1 0.0013 18.7 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3832) Humanin PF15040.1 gi|452209632|ref|YP_007489746.1| - 0.1 11.8 1.3 0.21 10.8 0.0 1.9 2 0 0 2 2 2 0 Humanin family PAS_3 PF08447.6 gi|452209634|ref|YP_007489748.1| - 5.9e-33 112.8 3.6 2.1e-15 56.6 0.1 3.2 3 0 0 3 3 3 2 PAS fold DUF2111 PF09884.4 gi|452209634|ref|YP_007489748.1| - 7.1e-33 112.2 0.5 3.5e-32 110.0 0.2 2.3 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2111) PAS_9 PF13426.1 gi|452209634|ref|YP_007489748.1| - 4e-17 62.4 1.8 1.9e-06 28.2 0.0 3.4 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.1 gi|452209634|ref|YP_007489748.1| - 6.4e-15 55.9 0.0 2.2e-12 47.7 0.0 2.5 2 0 0 2 2 2 1 GAF domain PAS PF00989.19 gi|452209634|ref|YP_007489748.1| - 1e-10 41.3 2.0 0.00023 20.9 0.1 3.0 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|452209634|ref|YP_007489748.1| - 2.3e-09 37.2 0.1 0.001 19.0 0.0 3.4 3 0 0 3 3 3 2 PAS fold GAF_3 PF13492.1 gi|452209634|ref|YP_007489748.1| - 6.4e-06 26.2 0.0 8.8e-05 22.6 0.0 2.3 2 0 0 2 2 2 1 GAF domain PAS_11 PF14598.1 gi|452209634|ref|YP_007489748.1| - 9e-06 25.6 0.0 0.19 11.6 0.0 2.7 2 0 0 2 2 2 2 PAS domain DUF3237 PF11578.3 gi|452209634|ref|YP_007489748.1| - 0.0046 16.2 0.0 2.7 7.2 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3237) GAF PF01590.21 gi|452209634|ref|YP_007489748.1| - 0.022 14.9 0.0 0.06 13.4 0.0 1.7 2 0 0 2 2 2 0 GAF domain DUF3654 PF12376.3 gi|452209634|ref|YP_007489748.1| - 0.028 14.2 0.6 0.13 12.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) DUF3155 PF11352.3 gi|452209634|ref|YP_007489748.1| - 0.035 14.3 0.1 8.9 6.6 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3155) NosD PF05048.8 gi|452209635|ref|YP_007489749.1| - 1.5e-87 292.6 97.8 1.9e-39 135.2 18.7 4.0 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452209635|ref|YP_007489749.1| - 3.5e-47 160.0 100.4 1.9e-17 63.4 13.9 4.2 1 1 3 4 4 4 4 Right handed beta helix region Pectinesterase PF01095.14 gi|452209635|ref|YP_007489749.1| - 0.0049 15.4 0.4 0.012 14.1 0.1 1.8 2 0 0 2 2 2 1 Pectinesterase B12-binding PF02310.14 gi|452209636|ref|YP_007489750.1| - 1.1e-18 67.2 0.3 1.4e-18 66.9 0.2 1.1 1 0 0 1 1 1 1 B12 binding domain Peripla_BP_6 PF13458.1 gi|452209636|ref|YP_007489750.1| - 0.004 16.5 0.2 0.0052 16.1 0.2 1.1 1 0 0 1 1 1 1 Periplasmic binding protein PTS_IIB PF02302.12 gi|452209636|ref|YP_007489750.1| - 0.032 14.7 1.1 1.5 9.3 0.1 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit ABC2_membrane_3 PF12698.2 gi|452209638|ref|YP_007489752.1| - 1.7e-44 152.2 17.2 2e-44 152.0 11.9 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|452209638|ref|YP_007489752.1| - 2.1e-19 69.4 5.3 6.5e-19 67.8 3.7 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452209638|ref|YP_007489752.1| - 3.9e-11 42.5 8.3 6.3e-11 41.8 5.7 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|452209638|ref|YP_007489752.1| - 6e-07 28.8 19.7 6e-07 28.8 13.7 2.8 2 1 1 3 3 3 1 ABC-2 type transporter Git3 PF11710.3 gi|452209638|ref|YP_007489752.1| - 0.0015 18.1 6.1 0.096 12.2 2.9 2.3 2 0 0 2 2 2 2 G protein-coupled glucose receptor regulating Gpa2 ABC_tran PF00005.22 gi|452209639|ref|YP_007489753.1| - 2.7e-28 98.9 0.0 5e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.1 gi|452209639|ref|YP_007489753.1| - 7.7e-18 64.7 0.1 1.9e-17 63.5 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.1 gi|452209639|ref|YP_007489753.1| - 7.1e-13 49.1 3.0 1.4e-11 44.8 2.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|452209639|ref|YP_007489753.1| - 0.00051 20.0 0.2 0.0017 18.3 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.1 gi|452209639|ref|YP_007489753.1| - 0.0011 19.3 0.2 0.0011 19.3 0.1 2.7 2 1 0 3 3 3 1 AAA domain AAA_22 PF13401.1 gi|452209639|ref|YP_007489753.1| - 0.0015 18.6 0.4 0.0069 16.5 0.3 2.0 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|452209639|ref|YP_007489753.1| - 0.0017 17.5 0.3 0.0053 15.9 0.0 2.0 3 0 0 3 3 3 1 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|452209639|ref|YP_007489753.1| - 0.0023 17.6 0.3 0.0053 16.4 0.1 1.7 2 0 0 2 2 2 1 Archaeal ATPase NTPase_1 PF03266.10 gi|452209639|ref|YP_007489753.1| - 0.0041 16.8 0.4 0.49 10.1 0.0 2.6 2 1 1 3 3 3 1 NTPase AAA_13 PF13166.1 gi|452209639|ref|YP_007489753.1| - 0.0042 15.6 1.0 0.36 9.2 0.0 2.5 1 1 0 2 2 2 1 AAA domain UPF0079 PF02367.12 gi|452209639|ref|YP_007489753.1| - 0.0058 16.2 0.1 0.02 14.4 0.0 1.9 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 SMC_N PF02463.14 gi|452209639|ref|YP_007489753.1| - 0.0076 15.4 0.2 0.97 8.6 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452209639|ref|YP_007489753.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|452209639|ref|YP_007489753.1| - 0.012 15.1 0.0 0.045 13.3 0.0 2.0 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|452209639|ref|YP_007489753.1| - 0.022 14.4 0.0 0.053 13.2 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.1 gi|452209639|ref|YP_007489753.1| - 0.033 14.0 0.0 0.07 13.0 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA PF00004.24 gi|452209639|ref|YP_007489753.1| - 0.037 14.2 0.5 0.15 12.3 0.3 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Nnf1 PF03980.9 gi|452209639|ref|YP_007489753.1| - 0.041 13.8 0.9 0.15 12.0 0.1 2.0 2 0 0 2 2 2 0 Nnf1 PIF1 PF05970.9 gi|452209639|ref|YP_007489753.1| - 0.054 12.4 0.1 0.24 10.3 0.0 1.9 2 0 0 2 2 2 0 PIF1-like helicase cobW PF02492.14 gi|452209639|ref|YP_007489753.1| - 0.065 12.6 0.4 0.17 11.3 0.1 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.1 gi|452209639|ref|YP_007489753.1| - 0.067 13.0 0.0 0.89 9.4 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452209639|ref|YP_007489753.1| - 0.068 12.8 0.1 0.36 10.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|452209639|ref|YP_007489753.1| - 0.08 13.7 0.6 0.31 11.8 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|452209639|ref|YP_007489753.1| - 0.14 11.9 0.0 0.41 10.4 0.0 1.8 1 0 0 1 1 1 0 Part of AAA domain AAA_14 PF13173.1 gi|452209639|ref|YP_007489753.1| - 0.37 10.6 2.0 2.8 7.8 0.4 2.8 2 2 0 2 2 2 0 AAA domain AAA_15 PF13175.1 gi|452209639|ref|YP_007489753.1| - 0.43 9.5 4.6 8.9 5.2 0.5 2.4 1 1 1 2 2 2 0 AAA ATPase domain RibD_C PF01872.12 gi|452209640|ref|YP_007489754.1| - 3.2e-14 52.9 0.0 7.7e-14 51.7 0.0 1.6 1 1 0 1 1 1 1 RibD C-terminal domain Oxidored_q1 PF00361.15 gi|452209641|ref|YP_007489755.1| - 4.2e-58 196.7 19.6 4.2e-58 196.7 13.6 3.1 2 1 2 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains SID-1_RNA_chan PF13965.1 gi|452209641|ref|YP_007489755.1| - 2.7 6.0 7.0 0.13 10.4 0.8 1.7 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 NADHdh PF00146.16 gi|452209642|ref|YP_007489756.1| - 7.5e-13 48.2 18.8 1e-12 47.8 13.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q1 PF00361.15 gi|452209644|ref|YP_007489758.1| - 3.3e-47 161.0 20.3 3.3e-47 161.0 14.1 2.4 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains DUF4212 PF13937.1 gi|452209644|ref|YP_007489758.1| - 4 7.5 7.8 0.79 9.7 1.8 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) Oxidored_q6 PF01058.17 gi|452209645|ref|YP_007489759.1| - 6.9e-22 77.4 0.0 9.8e-22 76.9 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1724 PF08350.5 gi|452209647|ref|YP_007489761.1| - 5.7e-18 64.2 0.5 1.1e-17 63.2 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_11 PF08279.7 gi|452209647|ref|YP_007489761.1| - 0.0011 18.5 0.1 0.0025 17.4 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.14 gi|452209647|ref|YP_007489761.1| - 0.011 15.3 0.1 0.029 14.0 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|452209647|ref|YP_007489761.1| - 0.014 15.1 0.1 0.036 13.8 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix Phage_rep_org_N PF09681.5 gi|452209647|ref|YP_007489761.1| - 0.016 14.7 0.1 0.048 13.2 0.1 1.7 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_27 PF13463.1 gi|452209647|ref|YP_007489761.1| - 0.02 15.2 0.0 0.038 14.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|452209647|ref|YP_007489761.1| - 0.051 13.2 0.0 0.094 12.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family QueF_N PF14819.1 gi|452209647|ref|YP_007489761.1| - 0.084 12.9 1.7 3 7.9 0.2 2.4 1 1 1 2 2 2 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HTH_20 PF12840.2 gi|452209647|ref|YP_007489761.1| - 0.095 12.5 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Imm18 PF15566.1 gi|452209647|ref|YP_007489761.1| - 0.097 12.0 0.0 0.25 10.6 0.0 1.7 1 0 0 1 1 1 0 Immunity protein 18 PadR PF03551.9 gi|452209647|ref|YP_007489761.1| - 0.098 12.4 0.0 0.27 11.0 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Response_reg PF00072.19 gi|452209648|ref|YP_007489762.1| - 2.5e-28 98.3 0.3 2.8e-28 98.1 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.6 gi|452209648|ref|YP_007489762.1| - 0.12 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ NCD1 PF04904.8 gi|452209648|ref|YP_007489762.1| - 0.13 12.0 0.1 1.2 8.8 0.0 2.0 2 0 0 2 2 2 0 NAB conserved region 1 (NCD1) E1-E2_ATPase PF00122.15 gi|452209650|ref|YP_007489764.1| - 2.6e-66 222.9 0.3 8.1e-66 221.3 0.2 1.9 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|452209650|ref|YP_007489764.1| - 7.2e-43 146.2 5.1 7.4e-43 146.1 0.9 2.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|452209650|ref|YP_007489764.1| - 3.2e-36 125.7 0.1 1.1e-30 107.6 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|452209650|ref|YP_007489764.1| - 4.3e-19 68.2 0.0 8.1e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Cation_ATPase_N PF00690.21 gi|452209650|ref|YP_007489764.1| - 1.4e-18 66.1 0.1 4e-18 64.6 0.1 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|452209650|ref|YP_007489764.1| - 1e-16 61.6 0.0 3e-16 60.1 0.0 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|452209650|ref|YP_007489764.1| - 1.2e-09 38.0 1.6 1.2e-05 25.0 1.1 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase DUF3650 PF12368.3 gi|452209650|ref|YP_007489764.1| - 0.025 14.0 1.4 0.098 12.1 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3650) HAD_2 PF13419.1 gi|452209650|ref|YP_007489764.1| - 0.048 13.8 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase URO-D PF01208.12 gi|452209652|ref|YP_007489766.1| - 7.7e-90 301.2 0.0 8.7e-90 301.0 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF4445 PF14574.1 gi|452209654|ref|YP_007489768.1| - 1.4e-96 323.3 7.6 2.2e-96 322.6 5.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4_7 PF12838.2 gi|452209654|ref|YP_007489768.1| - 1.1e-06 28.9 10.5 2.3e-06 27.8 7.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209654|ref|YP_007489768.1| - 7.4e-06 26.1 11.0 1.6e-05 25.1 7.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209654|ref|YP_007489768.1| - 1.3e-05 24.7 10.7 0.0045 16.7 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452209654|ref|YP_007489768.1| - 3.3e-05 24.5 10.0 0.00015 22.4 1.5 2.5 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|452209654|ref|YP_007489768.1| - 4.4e-05 22.9 3.9 4.4e-05 22.9 2.7 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209654|ref|YP_007489768.1| - 5.9e-05 22.8 11.8 0.00046 19.9 1.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209654|ref|YP_007489768.1| - 8.8e-05 22.2 12.9 0.00091 18.9 9.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452209654|ref|YP_007489768.1| - 0.00016 22.0 2.6 0.011 16.1 0.0 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209654|ref|YP_007489768.1| - 0.00081 19.6 4.4 0.013 15.8 0.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209654|ref|YP_007489768.1| - 0.00091 19.0 4.3 0.0018 18.1 3.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209654|ref|YP_007489768.1| - 0.0053 16.9 12.7 0.011 16.0 1.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209654|ref|YP_007489768.1| - 0.018 14.9 11.7 0.073 13.0 1.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452209654|ref|YP_007489768.1| - 0.043 14.3 17.9 0.69 10.6 4.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209654|ref|YP_007489768.1| - 0.098 12.6 11.2 0.047 13.7 1.2 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452209654|ref|YP_007489768.1| - 2.2 8.9 9.9 18 5.9 6.9 2.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain cobW PF02492.14 gi|452209656|ref|YP_007489770.1| - 1.3e-35 122.4 1.0 1.9e-35 121.9 0.7 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.18 gi|452209656|ref|YP_007489770.1| - 0.00032 20.1 1.5 0.00095 18.6 1.0 1.8 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.17 gi|452209656|ref|YP_007489770.1| - 0.00034 20.0 2.7 0.00066 19.1 0.4 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MobB PF03205.9 gi|452209656|ref|YP_007489770.1| - 0.0018 18.0 2.5 0.0038 16.9 1.1 2.1 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|452209656|ref|YP_007489770.1| - 0.0043 15.8 0.5 0.011 14.5 0.3 1.7 1 0 0 1 1 1 1 ArgK protein DUF2922 PF11148.3 gi|452209656|ref|YP_007489770.1| - 0.0077 15.8 1.3 0.067 12.8 0.1 3.0 3 0 0 3 3 3 1 Protein of unknown function (DUF2922) AAA_19 PF13245.1 gi|452209656|ref|YP_007489770.1| - 0.021 14.5 0.2 0.047 13.4 0.1 1.5 1 0 0 1 1 1 0 Part of AAA domain KTI12 PF08433.5 gi|452209656|ref|YP_007489770.1| - 0.036 13.2 0.0 0.089 11.9 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_31 PF13614.1 gi|452209656|ref|YP_007489770.1| - 0.048 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain LpxK PF02606.9 gi|452209656|ref|YP_007489770.1| - 0.06 12.3 0.9 0.11 11.4 0.7 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase SelP_N PF04592.9 gi|452209656|ref|YP_007489770.1| - 5 6.4 7.6 1.3 8.3 3.2 1.5 2 0 0 2 2 2 0 Selenoprotein P, N terminal region B12-binding PF02310.14 gi|452209658|ref|YP_007489772.1| - 7.2e-17 61.3 0.1 1.1e-16 60.7 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452209658|ref|YP_007489772.1| - 3.2e-13 49.5 0.0 6.7e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain Grp1_Fun34_YaaH PF01184.14 gi|452209659|ref|YP_007489773.1| - 9.2e-41 139.4 27.7 1.1e-40 139.2 19.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DIM PF08194.7 gi|452209659|ref|YP_007489773.1| - 1.3 9.0 5.7 10 6.1 2.0 3.0 2 0 0 2 2 2 0 DIM protein Hydantoinase_A PF01968.13 gi|452209661|ref|YP_007489775.1| - 5e-86 288.4 0.7 2.5e-85 286.0 0.0 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|452209661|ref|YP_007489775.1| - 5.2e-44 149.8 0.1 3.8e-40 137.2 0.0 2.7 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|452209661|ref|YP_007489775.1| - 8.8e-06 24.3 0.7 0.056 11.7 0.0 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|452209661|ref|YP_007489775.1| - 0.00097 18.5 0.1 0.25 10.6 0.0 3.0 3 0 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family KH_5 PF13184.1 gi|452209661|ref|YP_007489775.1| - 0.1 12.4 0.3 22 4.9 0.0 3.1 3 0 0 3 3 3 0 NusA-like KH domain StbA PF06406.6 gi|452209661|ref|YP_007489775.1| - 0.11 11.3 0.0 0.23 10.3 0.0 1.4 1 0 0 1 1 1 0 StbA protein FtsA PF14450.1 gi|452209661|ref|YP_007489775.1| - 0.14 12.0 1.4 3.7 7.4 0.0 2.7 2 0 0 2 2 2 0 Cell division protein FtsA DUF1724 PF08350.5 gi|452209663|ref|YP_007489777.1| - 9.8e-27 92.2 0.1 1.9e-26 91.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|452209663|ref|YP_007489777.1| - 0.0018 18.5 0.2 0.0043 17.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452209663|ref|YP_007489777.1| - 0.0022 17.6 0.1 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|452209663|ref|YP_007489777.1| - 0.0035 17.0 0.4 0.027 14.1 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_45 PF14947.1 gi|452209663|ref|YP_007489777.1| - 0.0061 16.3 0.4 0.021 14.6 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_11 PF08279.7 gi|452209663|ref|YP_007489777.1| - 0.048 13.3 1.4 0.14 11.7 0.3 2.2 2 0 0 2 2 2 0 HTH domain DUF1724 PF08350.5 gi|452209664|ref|YP_007489778.1| - 1.2e-28 98.3 0.3 4.1e-28 96.7 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452209664|ref|YP_007489778.1| - 0.0018 17.8 0.4 0.0032 17.0 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|452209664|ref|YP_007489778.1| - 0.031 14.6 0.1 0.058 13.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain ParcG PF10274.4 gi|452209664|ref|YP_007489778.1| - 0.063 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 Parkin co-regulated protein HTH_20 PF12840.2 gi|452209664|ref|YP_007489778.1| - 0.067 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.14 gi|452209664|ref|YP_007489778.1| - 0.088 12.5 0.1 0.26 11.0 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Phage_rep_org_N PF09681.5 gi|452209664|ref|YP_007489778.1| - 0.13 11.8 1.9 0.15 11.6 0.3 1.8 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) Cupredoxin_1 PF13473.1 gi|452209665|ref|YP_007489779.1| - 0.025 14.4 0.0 0.05 13.5 0.0 1.6 1 1 0 1 1 1 0 Cupredoxin-like domain DUF4349 PF14257.1 gi|452209665|ref|YP_007489779.1| - 0.031 13.4 0.7 0.042 13.0 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Exo5 PF09810.4 gi|452209665|ref|YP_007489779.1| - 0.067 12.4 0.1 0.083 12.1 0.1 1.1 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease MMR_HSR1_C PF08438.5 gi|452209666|ref|YP_007489780.1| - 8.9e-35 119.2 0.0 1.5e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|452209666|ref|YP_007489780.1| - 1.6e-15 57.0 0.0 7.7e-15 54.8 0.0 2.2 1 1 1 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.16 gi|452209666|ref|YP_007489780.1| - 7.4e-14 51.3 0.0 1.7e-13 50.1 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|452209666|ref|YP_007489780.1| - 4.2e-09 35.8 0.9 5.8e-07 28.9 0.0 2.8 3 0 0 3 3 3 2 Ferrous iron transport protein B Prenyltransf PF01255.14 gi|452209667|ref|YP_007489781.1| - 6.9e-30 103.8 0.0 6.8e-29 100.5 0.0 2.0 2 0 0 2 2 2 1 Putative undecaprenyl diphosphate synthase DUF1922 PF09082.5 gi|452209668|ref|YP_007489782.1| - 0.0018 18.3 1.1 0.0063 16.5 0.1 2.2 2 1 1 3 3 2 1 Domain of unknown function (DUF1922) Ribosomal_S27e PF01667.12 gi|452209668|ref|YP_007489782.1| - 0.0027 17.2 1.2 0.0061 16.0 0.9 1.6 1 0 0 1 1 1 1 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.2 gi|452209668|ref|YP_007489782.1| - 0.0089 15.8 2.5 0.018 14.8 1.8 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Ogr_Delta PF04606.7 gi|452209668|ref|YP_007489782.1| - 0.013 15.1 1.5 4.3 7.0 0.2 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger TF_Zn_Ribbon PF08271.7 gi|452209668|ref|YP_007489782.1| - 0.017 14.4 0.0 0.039 13.2 0.0 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|452209668|ref|YP_007489782.1| - 0.029 14.0 1.1 0.075 12.7 0.8 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.14 gi|452209668|ref|YP_007489782.1| - 0.039 13.4 1.2 7.1 6.2 0.0 2.4 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DZR PF12773.2 gi|452209668|ref|YP_007489782.1| - 0.052 13.3 1.6 0.076 12.8 0.5 1.7 2 0 0 2 2 1 0 Double zinc ribbon DUF1610 PF07754.6 gi|452209668|ref|YP_007489782.1| - 0.058 13.5 9.2 0.18 11.9 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) C1_1 PF00130.17 gi|452209668|ref|YP_007489782.1| - 0.085 12.5 2.3 0.16 11.7 1.6 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-CHY PF05495.7 gi|452209668|ref|YP_007489782.1| - 0.091 12.9 0.7 0.18 11.9 0.5 1.5 1 0 0 1 1 1 0 CHY zinc finger DUF655 PF04919.7 gi|452209668|ref|YP_007489782.1| - 0.093 12.4 0.0 1.5 8.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF655) DUF2296 PF10058.4 gi|452209668|ref|YP_007489782.1| - 0.11 12.3 0.6 0.23 11.2 0.4 1.6 1 0 0 1 1 1 0 Predicted integral membrane metal-binding protein (DUF2296) PHD PF00628.24 gi|452209668|ref|YP_007489782.1| - 0.11 12.1 0.9 0.22 11.2 0.7 1.5 1 0 0 1 1 1 0 PHD-finger zf-ribbon_3 PF13248.1 gi|452209668|ref|YP_007489782.1| - 0.12 11.6 0.7 25 4.2 0.0 2.9 3 0 0 3 3 3 0 zinc-ribbon domain HypA PF01155.14 gi|452209668|ref|YP_007489782.1| - 0.12 12.0 0.9 0.25 11.0 0.6 1.5 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_5 PF13719.1 gi|452209668|ref|YP_007489782.1| - 0.25 10.9 5.2 0.85 9.2 3.6 2.0 1 1 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|452209668|ref|YP_007489782.1| - 0.37 10.3 2.9 0.87 9.1 2.0 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_4 PF13717.1 gi|452209668|ref|YP_007489782.1| - 0.38 10.4 5.8 1.4 8.7 4.0 2.0 1 1 0 1 1 1 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|452209668|ref|YP_007489782.1| - 0.44 10.8 2.4 1.4 9.2 0.7 2.3 2 1 1 3 3 3 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.5 gi|452209668|ref|YP_007489782.1| - 0.82 9.6 4.3 24 4.9 3.4 2.5 1 1 1 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|452209668|ref|YP_007489782.1| - 2 8.0 7.2 12 5.5 3.5 2.8 2 1 0 2 2 2 0 zinc-ribbon domain DUF128 PF01995.11 gi|452209670|ref|YP_007489784.1| - 9.9e-95 315.9 0.5 1.2e-94 315.6 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF128 HTH_12 PF08461.5 gi|452209670|ref|YP_007489784.1| - 3.9e-32 109.7 0.8 8.6e-32 108.6 0.5 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.1 gi|452209670|ref|YP_007489784.1| - 0.063 13.2 1.1 0.12 12.3 0.8 1.4 1 0 0 1 1 1 0 HTH-like domain HTH_20 PF12840.2 gi|452209670|ref|YP_007489784.1| - 0.14 11.9 0.0 0.34 10.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain FUR PF01475.14 gi|452209670|ref|YP_007489784.1| - 0.15 11.9 0.0 0.7 9.8 0.0 2.0 2 0 0 2 2 2 0 Ferric uptake regulator family Lactamase_B PF00753.22 gi|452209671|ref|YP_007489785.1| - 8.1e-15 54.9 0.1 3e-14 53.1 0.1 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452209671|ref|YP_007489785.1| - 9.1e-09 35.1 0.0 1e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain ABC_tran PF00005.22 gi|452209672|ref|YP_007489786.1| - 2.2e-21 76.6 0.0 5.5e-21 75.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452209672|ref|YP_007489786.1| - 4.8e-10 39.8 0.0 4.5e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452209672|ref|YP_007489786.1| - 1.4e-05 24.4 0.1 0.0021 17.3 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|452209672|ref|YP_007489786.1| - 0.0014 19.0 0.0 0.0027 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452209672|ref|YP_007489786.1| - 0.0059 16.1 0.0 0.013 14.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|452209672|ref|YP_007489786.1| - 0.0067 15.6 0.0 0.014 14.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_13 PF13166.1 gi|452209672|ref|YP_007489786.1| - 0.022 13.2 0.0 0.03 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.10 gi|452209672|ref|YP_007489786.1| - 0.046 12.3 0.0 0.06 11.9 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_10 PF12846.2 gi|452209672|ref|YP_007489786.1| - 0.058 12.8 0.2 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 AAA-like domain MutS_V PF00488.16 gi|452209672|ref|YP_007489786.1| - 0.059 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 MutS domain V Arch_ATPase PF01637.13 gi|452209672|ref|YP_007489786.1| - 0.072 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Archaeal ATPase UPF0051 PF01458.12 gi|452209673|ref|YP_007489787.1| - 9.5e-55 185.5 0.0 1.2e-54 185.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) KaiC PF06745.8 gi|452209675|ref|YP_007489789.1| - 6.3e-84 280.6 2.5 6.1e-42 143.2 0.0 2.4 3 0 0 3 3 3 2 KaiC AAA_25 PF13481.1 gi|452209675|ref|YP_007489789.1| - 1.3e-18 67.0 0.0 2e-16 59.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain GvpD PF07088.6 gi|452209675|ref|YP_007489789.1| - 7.1e-05 21.3 0.0 0.065 11.5 0.0 2.2 2 0 0 2 2 2 2 GvpD gas vesicle protein AAA_16 PF13191.1 gi|452209675|ref|YP_007489789.1| - 8.4e-05 22.6 0.9 0.00085 19.3 0.0 2.5 3 0 0 3 3 2 1 AAA ATPase domain RecA PF00154.16 gi|452209675|ref|YP_007489789.1| - 0.00019 20.5 0.0 0.00033 19.8 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_17 PF13207.1 gi|452209675|ref|YP_007489789.1| - 0.0002 22.1 0.4 0.0044 17.8 0.0 2.9 3 0 0 3 3 3 1 AAA domain DnaB_C PF03796.10 gi|452209675|ref|YP_007489789.1| - 0.00043 19.2 0.0 0.00084 18.3 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.12 gi|452209675|ref|YP_007489789.1| - 0.001 18.5 0.0 0.0025 17.2 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_14 PF13173.1 gi|452209675|ref|YP_007489789.1| - 0.0013 18.5 0.0 0.0069 16.2 0.0 2.3 1 1 0 1 1 1 1 AAA domain PAXNEB PF05625.6 gi|452209675|ref|YP_007489789.1| - 0.0025 16.7 0.2 0.012 14.4 0.1 2.0 2 0 0 2 2 2 1 PAXNEB protein NACHT PF05729.7 gi|452209675|ref|YP_007489789.1| - 0.0025 17.4 0.0 0.0048 16.5 0.0 1.6 1 0 0 1 1 1 1 NACHT domain CobU PF02283.11 gi|452209675|ref|YP_007489789.1| - 0.0092 15.4 0.0 0.073 12.4 0.0 2.4 2 0 0 2 2 2 1 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_22 PF13401.1 gi|452209675|ref|YP_007489789.1| - 0.012 15.7 0.0 0.05 13.7 0.0 2.1 1 1 0 1 1 1 0 AAA domain IncA PF04156.9 gi|452209675|ref|YP_007489789.1| - 0.017 14.7 4.0 0.03 13.9 2.8 1.3 1 0 0 1 1 1 0 IncA protein AAA_32 PF13654.1 gi|452209675|ref|YP_007489789.1| - 0.019 13.6 1.8 0.44 9.1 0.5 2.1 2 0 0 2 2 2 0 AAA domain FrhB_FdhB_N PF04422.8 gi|452209675|ref|YP_007489789.1| - 0.038 13.8 0.0 0.098 12.5 0.0 1.7 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term AAA_19 PF13245.1 gi|452209675|ref|YP_007489789.1| - 0.042 13.6 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain Phage_GP20 PF06810.6 gi|452209675|ref|YP_007489789.1| - 0.042 13.2 2.2 0.076 12.4 1.5 1.3 1 0 0 1 1 1 0 Phage minor structural protein GP20 AAA_24 PF13479.1 gi|452209675|ref|YP_007489789.1| - 0.048 13.2 0.0 0.12 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain GAS PF13851.1 gi|452209675|ref|YP_007489789.1| - 0.055 12.6 5.3 0.12 11.5 3.7 1.5 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding AAA PF00004.24 gi|452209675|ref|YP_007489789.1| - 0.057 13.6 0.1 0.29 11.3 0.0 2.3 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) PAN_4 PF14295.1 gi|452209675|ref|YP_007489789.1| - 0.059 13.0 0.1 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 PAN domain AAA_18 PF13238.1 gi|452209675|ref|YP_007489789.1| - 0.063 13.5 0.2 0.25 11.6 0.0 2.2 2 0 0 2 2 1 0 AAA domain MobB PF03205.9 gi|452209675|ref|YP_007489789.1| - 0.065 12.9 0.0 0.54 9.9 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATP-synt_ab PF00006.20 gi|452209675|ref|YP_007489789.1| - 0.096 12.1 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Miro PF08477.8 gi|452209675|ref|YP_007489789.1| - 0.11 12.9 0.0 0.49 10.8 0.0 2.0 2 0 0 2 2 2 0 Miro-like protein AAA_23 PF13476.1 gi|452209675|ref|YP_007489789.1| - 0.17 12.2 2.2 10 6.3 0.2 2.4 2 0 0 2 2 2 0 AAA domain FliD_C PF07195.7 gi|452209675|ref|YP_007489789.1| - 0.25 10.5 3.0 1.2 8.4 2.1 2.0 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF4407 PF14362.1 gi|452209675|ref|YP_007489789.1| - 0.67 8.8 5.1 0.96 8.3 3.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.7 gi|452209675|ref|YP_007489789.1| - 1.1 9.7 3.7 1.8 9.0 1.3 2.3 2 1 0 2 2 2 0 SlyX KaiB PF07689.7 gi|452209676|ref|YP_007489790.1| - 1.9e-30 104.1 0.0 2.8e-30 103.6 0.0 1.2 1 0 0 1 1 1 1 KaiB domain KaiB PF07689.7 gi|452209677|ref|YP_007489791.1| - 7.6e-29 99.0 0.0 9.7e-29 98.6 0.0 1.1 1 0 0 1 1 1 1 KaiB domain PAS PF00989.19 gi|452209678|ref|YP_007489792.1| - 1.9e-09 37.2 0.0 3.6e-09 36.3 0.0 1.4 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.1 gi|452209678|ref|YP_007489792.1| - 3.4e-08 33.8 0.0 7.8e-08 32.6 0.0 1.6 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.1 gi|452209678|ref|YP_007489792.1| - 6.9e-06 25.7 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|452209678|ref|YP_007489792.1| - 0.001 19.0 0.0 0.0028 17.6 0.0 1.6 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.2 gi|452209678|ref|YP_007489792.1| - 0.006 16.5 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_11 PF14598.1 gi|452209678|ref|YP_007489792.1| - 0.011 15.6 0.0 0.016 15.1 0.0 1.3 1 0 0 1 1 1 0 PAS domain CCDC155 PF14662.1 gi|452209678|ref|YP_007489792.1| - 0.042 13.4 0.8 0.12 11.9 0.3 1.8 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 GARS_N PF02844.10 gi|452209678|ref|YP_007489792.1| - 0.083 13.3 0.0 6.3 7.3 0.0 2.2 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain LysR_substrate PF03466.15 gi|452209678|ref|YP_007489792.1| - 0.084 11.9 0.2 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 LysR substrate binding domain DivIVA PF05103.8 gi|452209678|ref|YP_007489792.1| - 0.098 12.7 0.4 0.17 11.9 0.3 1.3 1 0 0 1 1 1 0 DivIVA protein Lzipper-MIP1 PF14389.1 gi|452209678|ref|YP_007489792.1| - 0.11 12.6 1.3 0.18 11.9 0.9 1.3 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 HALZ PF02183.13 gi|452209678|ref|YP_007489792.1| - 0.45 10.2 3.5 0.29 10.8 1.1 1.7 2 0 0 2 2 2 0 Homeobox associated leucine zipper HisKA_2 PF07568.7 gi|452209679|ref|YP_007489793.1| - 9.3e-34 115.1 0.7 2.6e-33 113.6 0.5 1.8 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|452209679|ref|YP_007489793.1| - 7.9e-20 70.7 0.1 1.6e-19 69.7 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|452209679|ref|YP_007489793.1| - 7.5e-10 38.5 0.0 1.7e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|452209679|ref|YP_007489793.1| - 6.5e-08 32.9 0.1 1.2e-06 28.7 0.0 2.4 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|452209679|ref|YP_007489793.1| - 0.00013 21.7 0.0 0.00026 20.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|452209679|ref|YP_007489793.1| - 0.00023 21.5 0.1 0.00055 20.3 0.1 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_4 PF08448.5 gi|452209679|ref|YP_007489793.1| - 0.0029 17.6 0.0 0.0093 15.9 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS PF00989.19 gi|452209679|ref|YP_007489793.1| - 0.0097 15.6 0.0 0.028 14.1 0.0 1.8 2 0 0 2 2 2 1 PAS fold DUF3887 PF13026.1 gi|452209679|ref|YP_007489793.1| - 0.099 12.9 2.2 0.29 11.4 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3887) PTA_PTB PF01515.14 gi|452209679|ref|YP_007489793.1| - 0.36 9.8 1.8 0.57 9.1 1.3 1.3 1 0 0 1 1 1 0 Phosphate acetyl/butaryl transferase Yip1 PF04893.12 gi|452209680|ref|YP_007489794.1| - 0.1 12.0 4.1 0.12 11.9 2.8 1.1 1 0 0 1 1 1 0 Yip1 domain DUF2085 PF09858.4 gi|452209680|ref|YP_007489794.1| - 0.2 11.7 1.6 0.22 11.6 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2085) DAGK_prokar PF01219.14 gi|452209680|ref|YP_007489794.1| - 0.36 10.4 4.3 0.22 11.1 1.6 1.6 1 1 1 2 2 2 0 Prokaryotic diacylglycerol kinase YjgP_YjgQ PF03739.9 gi|452209680|ref|YP_007489794.1| - 0.52 8.9 3.3 0.56 8.8 2.3 1.0 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family MtrF PF09472.5 gi|452209680|ref|YP_007489794.1| - 3 7.1 7.8 2.4 7.4 0.9 2.1 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) PsbH PF00737.15 gi|452209680|ref|YP_007489794.1| - 8 6.1 7.5 1.4 8.5 1.6 2.0 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein TrmB PF01978.14 gi|452209681|ref|YP_007489795.1| - 3.6e-05 23.3 0.1 5.7e-05 22.7 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|452209681|ref|YP_007489795.1| - 0.00016 21.2 0.0 0.00024 20.7 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|452209681|ref|YP_007489795.1| - 0.00094 18.8 0.3 0.0016 18.0 0.1 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|452209681|ref|YP_007489795.1| - 0.00097 19.4 0.0 0.0015 18.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|452209681|ref|YP_007489795.1| - 0.0019 18.0 0.5 0.0041 17.0 0.1 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Penicillinase_R PF03965.11 gi|452209681|ref|YP_007489795.1| - 0.0023 18.0 0.2 0.0035 17.4 0.2 1.4 1 1 0 1 1 1 1 Penicillinase repressor TFIIE_alpha PF02002.12 gi|452209681|ref|YP_007489795.1| - 0.0087 15.5 2.4 0.011 15.2 1.2 1.5 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_24 PF13412.1 gi|452209681|ref|YP_007489795.1| - 0.01 15.1 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF2042 PF09743.4 gi|452209681|ref|YP_007489795.1| - 0.019 14.2 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2042) Rio2_N PF09202.6 gi|452209681|ref|YP_007489795.1| - 0.026 14.5 0.1 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Rio2, N-terminal Gp-FAR-1 PF05823.7 gi|452209681|ref|YP_007489795.1| - 0.031 14.2 0.5 0.041 13.8 0.4 1.2 1 1 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) HTH_36 PF13730.1 gi|452209681|ref|YP_007489795.1| - 0.052 13.6 0.3 0.18 11.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452209681|ref|YP_007489795.1| - 0.094 12.3 0.1 0.21 11.2 0.0 1.7 1 1 0 1 1 1 0 HTH domain Cullin_Nedd8 PF10557.4 gi|452209681|ref|YP_007489795.1| - 0.11 12.3 0.9 0.19 11.5 0.1 1.8 2 0 0 2 2 2 0 Cullin protein neddylation domain HTH_Crp_2 PF13545.1 gi|452209681|ref|YP_007489795.1| - 0.12 12.2 0.0 0.32 10.7 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain CtsR PF05848.6 gi|452209681|ref|YP_007489795.1| - 0.33 10.8 2.5 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 Firmicute transcriptional repressor of class III stress genes (CtsR) Fer4_5 PF12801.2 gi|452209682|ref|YP_007489796.1| - 7.8e-14 51.2 10.4 4.3e-10 39.2 0.6 3.6 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452209682|ref|YP_007489796.1| - 2e-09 37.6 11.3 0.00018 21.7 1.7 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452209682|ref|YP_007489796.1| - 2.8e-09 36.1 23.4 4.7e-06 25.9 1.9 3.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209682|ref|YP_007489796.1| - 1.9e-07 31.0 13.1 0.00021 21.2 2.3 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209682|ref|YP_007489796.1| - 8.5e-07 29.1 18.6 9e-05 22.6 12.6 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209682|ref|YP_007489796.1| - 4.8e-06 26.2 24.4 5.3e-06 26.1 14.1 2.9 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209682|ref|YP_007489796.1| - 7.5e-06 25.5 23.8 0.0011 18.7 3.6 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452209682|ref|YP_007489796.1| - 9e-06 25.4 17.8 0.00028 20.6 2.7 2.8 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209682|ref|YP_007489796.1| - 6.3e-05 22.9 27.4 0.00074 19.6 3.6 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452209682|ref|YP_007489796.1| - 9.7e-05 22.7 22.5 0.0022 18.3 2.6 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209682|ref|YP_007489796.1| - 0.00027 21.6 16.3 0.013 16.2 1.4 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|452209682|ref|YP_007489796.1| - 0.00057 19.6 24.7 0.00082 19.1 1.6 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452209682|ref|YP_007489796.1| - 0.00064 20.0 19.1 0.046 14.0 4.5 3.1 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452209682|ref|YP_007489796.1| - 0.0023 18.3 4.0 0.0023 18.3 2.8 4.5 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452209682|ref|YP_007489796.1| - 0.085 13.2 16.8 0.45 10.9 2.1 2.7 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|452209682|ref|YP_007489796.1| - 1.2 9.7 14.0 4.5 7.8 2.2 2.4 1 1 1 2 2 2 0 4Fe-4S single cluster domain Cpn60_TCP1 PF00118.19 gi|452209683|ref|YP_007489797.1| - 1.1e-164 548.6 14.5 1.3e-164 548.4 10.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF473 PF04322.7 gi|452209684|ref|YP_007489798.1| - 2.2e-43 146.6 0.3 2.5e-43 146.4 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) PAC2 PF09754.4 gi|452209685|ref|YP_007489799.1| - 2.6e-52 177.8 0.2 3.1e-52 177.6 0.2 1.0 1 0 0 1 1 1 1 PAC2 family PK_C PF02887.11 gi|452209686|ref|YP_007489800.1| - 3.1e-20 71.8 0.7 4.1e-20 71.4 0.5 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Asp_Glu_race PF01177.17 gi|452209686|ref|YP_007489800.1| - 0.0012 18.7 0.1 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase DUF2855 PF11017.3 gi|452209686|ref|YP_007489800.1| - 0.026 13.6 0.1 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) TGT PF01702.13 gi|452209687|ref|YP_007489801.1| - 1.5e-53 181.5 0.0 1.9e-53 181.2 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase UbiA PF01040.13 gi|452209688|ref|YP_007489802.1| - 6e-32 110.8 22.9 7.2e-32 110.6 15.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DAO PF01266.19 gi|452209689|ref|YP_007489803.1| - 3.5e-15 55.7 0.0 1.2e-09 37.5 0.0 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452209689|ref|YP_007489803.1| - 1e-09 37.3 0.2 7.7e-08 31.2 0.1 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.14 gi|452209689|ref|YP_007489803.1| - 2.6e-08 33.3 0.0 0.00014 21.0 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|452209689|ref|YP_007489803.1| - 1.1e-06 28.0 0.1 3.2e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|452209689|ref|YP_007489803.1| - 3.7e-06 26.0 0.0 5.1e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.9 gi|452209689|ref|YP_007489803.1| - 5.1e-05 23.2 0.2 0.00011 22.0 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|452209689|ref|YP_007489803.1| - 0.00015 20.7 0.0 0.00033 19.6 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.12 gi|452209689|ref|YP_007489803.1| - 0.00017 20.7 0.5 0.00029 20.0 0.0 1.7 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.22 gi|452209689|ref|YP_007489803.1| - 0.00038 20.7 0.0 0.029 14.7 0.0 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|452209689|ref|YP_007489803.1| - 0.00043 20.2 0.0 0.0013 18.7 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.1 gi|452209689|ref|YP_007489803.1| - 0.0005 20.1 0.0 0.0036 17.3 0.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|452209689|ref|YP_007489803.1| - 0.0027 16.6 0.0 0.0091 14.8 0.0 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.9 gi|452209689|ref|YP_007489803.1| - 0.054 12.1 0.0 2.6 6.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Radical_SAM PF04055.16 gi|452209690|ref|YP_007489804.1| - 1.5e-19 70.8 0.0 2.1e-19 70.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.1 gi|452209690|ref|YP_007489804.1| - 1.1e-05 25.6 1.3 2.2e-05 24.6 0.4 1.9 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|452209690|ref|YP_007489804.1| - 2.6e-05 24.3 0.0 4.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452209690|ref|YP_007489804.1| - 0.013 15.5 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain Costars PF14705.1 gi|452209691|ref|YP_007489805.1| - 0.1 12.5 3.6 0.52 10.3 0.2 2.9 2 1 0 2 2 2 0 Costars DUF1353 PF07087.6 gi|452209691|ref|YP_007489805.1| - 0.66 9.4 2.5 0.82 9.1 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1353) HAD PF12710.2 gi|452209692|ref|YP_007489806.1| - 6.8e-17 62.2 0.0 8.6e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452209692|ref|YP_007489806.1| - 6.2e-16 59.4 1.4 2.8e-14 54.0 1.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|452209692|ref|YP_007489806.1| - 8.6e-11 41.8 0.0 7.2e-09 35.5 0.0 2.6 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|452209692|ref|YP_007489806.1| - 1e-08 35.5 0.0 4.3e-08 33.5 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|452209692|ref|YP_007489806.1| - 3.2e-06 26.4 0.0 0.0091 15.1 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase S6PP PF05116.8 gi|452209692|ref|YP_007489806.1| - 0.00033 20.0 0.1 0.039 13.2 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase DUF373 PF04123.8 gi|452209692|ref|YP_007489806.1| - 0.026 13.5 0.0 0.04 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF705 PF05152.7 gi|452209692|ref|YP_007489806.1| - 0.044 12.7 0.1 0.067 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Ribosomal_S24e PF01282.14 gi|452209692|ref|YP_007489806.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S24e MTD PF01993.13 gi|452209694|ref|YP_007489808.1| - 8.3e-96 320.2 2.7 9.2e-96 320.1 1.9 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase CheD PF03975.8 gi|452209694|ref|YP_007489808.1| - 0.042 13.6 0.1 0.089 12.5 0.0 1.5 1 0 0 1 1 1 0 CheD chemotactic sensory transduction DUF2111 PF09884.4 gi|452209696|ref|YP_007489810.1| - 1.1e-35 121.2 0.3 1.6e-35 120.7 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) dTMP_synthase PF02593.9 gi|452209697|ref|YP_007489811.1| - 1.4e-68 230.5 0.0 1.6e-68 230.3 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase DapB_N PF01113.15 gi|452209697|ref|YP_007489811.1| - 0.00066 19.5 0.0 0.002 18.0 0.0 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus CoA_binding_2 PF13380.1 gi|452209697|ref|YP_007489811.1| - 0.048 13.8 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 CoA binding domain Thymidylate_kin PF02223.12 gi|452209698|ref|YP_007489812.1| - 1.1e-35 122.6 0.0 1.4e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_18 PF13238.1 gi|452209698|ref|YP_007489812.1| - 6e-06 26.5 0.0 8.7e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|452209698|ref|YP_007489812.1| - 7.7e-06 25.8 0.0 1.3e-05 25.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|452209698|ref|YP_007489812.1| - 2.7e-05 24.2 0.0 3.2e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452209698|ref|YP_007489812.1| - 0.0012 19.6 0.0 0.0021 18.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain CPT PF07931.7 gi|452209698|ref|YP_007489812.1| - 0.015 14.9 0.1 0.067 12.8 0.0 1.9 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_22 PF13401.1 gi|452209698|ref|YP_007489812.1| - 0.017 15.2 0.0 0.037 14.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|452209698|ref|YP_007489812.1| - 0.027 13.5 0.1 0.23 10.5 0.1 2.2 2 1 0 2 2 2 0 Zeta toxin NB-ARC PF00931.17 gi|452209698|ref|YP_007489812.1| - 0.051 12.4 0.0 0.056 12.2 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Cytidylate_kin2 PF13189.1 gi|452209698|ref|YP_007489812.1| - 0.094 12.6 0.0 0.13 12.1 0.0 1.4 1 1 0 1 1 1 0 Cytidylate kinase-like family AAA_14 PF13173.1 gi|452209698|ref|YP_007489812.1| - 0.13 12.1 0.0 0.2 11.5 0.0 1.4 1 1 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|452209698|ref|YP_007489812.1| - 0.13 11.8 0.0 0.36 10.4 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 CKS PF01111.14 gi|452209698|ref|YP_007489812.1| - 0.15 11.9 0.1 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit KTI12 PF08433.5 gi|452209698|ref|YP_007489812.1| - 0.16 11.1 0.1 0.28 10.3 0.0 1.6 1 1 0 1 1 1 0 Chromatin associated protein KTI12 His_biosynth PF00977.16 gi|452209700|ref|YP_007489814.1| - 1.7e-37 128.9 0.0 1.9e-37 128.7 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PRAI PF00697.17 gi|452209700|ref|YP_007489814.1| - 0.009 15.5 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FMN_dh PF01070.13 gi|452209700|ref|YP_007489814.1| - 0.023 13.5 1.1 0.58 8.9 0.1 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase DUF556 PF04476.8 gi|452209701|ref|YP_007489815.1| - 2.3e-98 328.1 0.8 2.5e-98 327.9 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF556) PIG-L PF02585.12 gi|452209701|ref|YP_007489815.1| - 0.064 13.7 0.0 9.7 6.7 0.0 2.1 1 1 1 2 2 2 0 GlcNAc-PI de-N-acetylase DUF457 PF04307.9 gi|452209702|ref|YP_007489816.1| - 3.7e-18 65.3 5.6 4.4e-18 65.1 3.9 1.1 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) MscS_TM PF12794.2 gi|452209702|ref|YP_007489816.1| - 0.039 12.5 0.0 0.08 11.5 0.0 1.4 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 DUF2162 PF09930.4 gi|452209702|ref|YP_007489816.1| - 0.35 9.9 4.0 17 4.4 0.0 2.9 2 1 0 2 2 2 0 Predicted transporter (DUF2162) DUF3473 PF11959.3 gi|452209705|ref|YP_007489819.1| - 1.3e-23 82.8 0.0 2.8e-23 81.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.16 gi|452209705|ref|YP_007489819.1| - 3.3e-20 71.9 0.0 4.6e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2540 PF10802.3 gi|452209705|ref|YP_007489819.1| - 0.023 14.3 0.1 7.7 6.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) Disaggr_repeat PF06848.6 gi|452209707|ref|YP_007489821.1| - 2.9e-96 320.1 3.1 2.3e-95 317.2 3.0 1.8 2 0 0 2 2 2 1 Disaggregatase related repeat Pectate_lyase_3 PF12708.2 gi|452209707|ref|YP_007489821.1| - 4.3e-13 49.8 9.0 4.3e-13 49.8 6.3 2.4 2 0 0 2 2 2 1 Pectate lyase superfamily protein Beta_helix PF13229.1 gi|452209707|ref|YP_007489821.1| - 8.2e-11 41.9 51.4 1.2e-07 31.5 11.0 3.4 2 1 1 3 3 3 2 Right handed beta helix region TGFb_propeptide PF00688.13 gi|452209707|ref|YP_007489821.1| - 0.002 17.4 0.0 0.091 12.0 0.0 2.3 2 0 0 2 2 2 1 TGF-beta propeptide Phage_integrase PF00589.17 gi|452209707|ref|YP_007489821.1| - 0.046 13.3 0.0 1.1 8.8 0.0 2.3 2 0 0 2 2 2 0 Phage integrase family Disaggr_assoc PF08480.5 gi|452209709|ref|YP_007489823.1| - 3.3e-99 330.2 13.4 3.3e-99 330.2 9.3 2.7 3 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|452209709|ref|YP_007489823.1| - 1.7e-15 57.1 40.0 2.9e-14 53.1 14.7 3.6 1 1 1 3 3 3 2 Right handed beta helix region Disaggr_repeat PF06848.6 gi|452209710|ref|YP_007489824.1| - 1.9e-91 304.4 3.1 3.8e-91 303.4 2.1 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|452209710|ref|YP_007489824.1| - 3.7e-75 251.7 3.7 3.7e-75 251.7 2.6 2.7 2 1 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.1 gi|452209710|ref|YP_007489824.1| - 2.5e-23 82.5 67.8 8.7e-13 48.3 13.3 3.1 1 1 2 3 3 3 3 Right handed beta helix region CarboxypepD_reg PF13620.1 gi|452209710|ref|YP_007489824.1| - 0.026 14.5 0.1 0.064 13.3 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain He_PIG_assoc PF10632.4 gi|452209711|ref|YP_007489825.1| - 0.045 13.0 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase Glycos_transf_2 PF00535.21 gi|452209712|ref|YP_007489826.1| - 1e-25 90.3 0.0 6.1e-24 84.5 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209712|ref|YP_007489826.1| - 1.2e-05 25.2 0.0 2e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452209712|ref|YP_007489826.1| - 0.00026 21.2 0.0 0.00055 20.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 GFO_IDH_MocA PF01408.17 gi|452209714|ref|YP_007489828.1| - 2.6e-30 105.4 0.1 4.1e-30 104.7 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|452209714|ref|YP_007489828.1| - 8.7e-07 28.7 0.0 2.2e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.19 gi|452209714|ref|YP_007489828.1| - 2.2e-05 24.7 0.0 4.1e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|452209714|ref|YP_007489828.1| - 0.02 14.7 0.1 0.053 13.4 0.1 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus UDPG_MGDP_dh_N PF03721.9 gi|452209714|ref|YP_007489828.1| - 0.061 12.6 0.0 0.11 11.8 0.0 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Gp_dh_N PF00044.19 gi|452209714|ref|YP_007489828.1| - 0.1 12.5 0.1 0.2 11.6 0.0 1.6 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|452209714|ref|YP_007489828.1| - 0.1 13.0 0.0 0.32 11.4 0.0 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent UPF0102 PF02021.12 gi|452209715|ref|YP_007489829.1| - 0.023 14.6 0.6 0.024 14.5 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 LZ_Tnp_IS481 PF13011.1 gi|452209715|ref|YP_007489829.1| - 0.076 13.3 0.2 0.083 13.2 0.1 1.1 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 ESSS PF10183.4 gi|452209716|ref|YP_007489830.1| - 1 9.7 2.0 2.2 8.6 0.0 2.5 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Polysacc_synt_3 PF13440.1 gi|452209717|ref|YP_007489831.1| - 3.4e-22 79.1 12.1 3.4e-22 79.1 8.4 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.12 gi|452209717|ref|YP_007489831.1| - 1.6e-20 73.5 23.4 1.6e-20 73.5 16.2 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Acetyltransf_6 PF13480.1 gi|452209719|ref|YP_007489833.1| - 6.9e-15 55.2 0.0 1.3e-13 51.1 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.11 gi|452209719|ref|YP_007489833.1| - 8.1e-06 24.7 0.0 0.18 10.4 0.0 3.0 2 1 1 3 3 3 3 FemAB family Acetyltransf_9 PF13527.1 gi|452209719|ref|YP_007489833.1| - 0.041 13.7 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4301 PF14134.1 gi|452209719|ref|YP_007489833.1| - 0.049 12.1 0.0 0.074 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) DUF482 PF04339.7 gi|452209719|ref|YP_007489833.1| - 0.052 12.4 0.0 0.099 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF482 Glycos_transf_1 PF00534.15 gi|452209720|ref|YP_007489834.1| - 2.3e-33 115.0 0.0 5e-33 113.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209720|ref|YP_007489834.1| - 1e-23 83.9 0.1 1.6e-23 83.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452209720|ref|YP_007489834.1| - 1e-12 48.1 0.0 1.9e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209720|ref|YP_007489834.1| - 5.3e-11 42.5 0.0 8.2e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452209720|ref|YP_007489834.1| - 2.5e-10 40.7 0.0 3.6e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|452209720|ref|YP_007489834.1| - 2.9e-06 27.1 0.0 1.3e-05 25.0 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|452209721|ref|YP_007489835.1| - 1.2e-17 64.0 0.0 1.7e-16 60.3 0.0 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209721|ref|YP_007489835.1| - 1.6e-08 34.6 0.0 4.6e-07 29.8 0.0 2.1 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|452209721|ref|YP_007489835.1| - 0.0014 18.3 0.0 0.014 15.1 0.0 2.1 1 1 1 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|452209721|ref|YP_007489835.1| - 0.0038 17.5 0.0 0.012 15.9 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|452209721|ref|YP_007489835.1| - 0.069 12.4 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 21 Polysacc_deac_1 PF01522.16 gi|452209722|ref|YP_007489836.1| - 0.012 15.2 0.0 0.053 13.1 0.0 1.9 1 1 0 1 1 1 0 Polysaccharide deacetylase DUF354 PF04007.7 gi|452209723|ref|YP_007489837.1| - 5.5e-39 133.9 0.0 6.5e-39 133.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.1 gi|452209723|ref|YP_007489837.1| - 0.0023 17.7 1.2 0.013 15.3 0.3 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like BRCA2 PF00634.13 gi|452209723|ref|YP_007489837.1| - 0.048 12.9 0.1 0.15 11.3 0.1 1.9 1 0 0 1 1 1 0 BRCA2 repeat HTH_psq PF05225.11 gi|452209723|ref|YP_007489837.1| - 0.06 12.9 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain UDPG_MGDP_dh_N PF03721.9 gi|452209725|ref|YP_007489839.1| - 2.1e-65 219.6 1.1 4.1e-65 218.6 0.8 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|452209725|ref|YP_007489839.1| - 1.6e-35 121.1 0.3 5.3e-35 119.5 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|452209725|ref|YP_007489839.1| - 4.6e-31 107.1 0.2 1.4e-30 105.5 0.1 1.9 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_Gly3P_dh_N PF01210.18 gi|452209725|ref|YP_007489839.1| - 2.9e-08 33.5 0.8 1.9e-07 30.9 0.1 2.7 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.12 gi|452209725|ref|YP_007489839.1| - 6.4e-07 29.7 0.6 0.044 14.2 0.0 3.8 3 1 1 4 4 4 2 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|452209725|ref|YP_007489839.1| - 4.1e-06 26.5 0.1 1.3e-05 24.9 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|452209725|ref|YP_007489839.1| - 2.8e-05 24.0 0.1 0.0045 16.8 0.0 2.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|452209725|ref|YP_007489839.1| - 0.00067 18.8 0.1 0.052 12.6 0.0 2.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|452209725|ref|YP_007489839.1| - 0.001 18.5 0.1 0.0029 17.0 0.1 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_11 PF14833.1 gi|452209725|ref|YP_007489839.1| - 0.0028 17.7 0.2 0.0079 16.2 0.1 1.9 1 1 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Pyr_redox PF00070.22 gi|452209725|ref|YP_007489839.1| - 0.0046 17.3 0.1 0.019 15.3 0.1 2.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.16 gi|452209725|ref|YP_007489839.1| - 0.0047 16.5 0.0 0.012 15.1 0.0 1.8 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.14 gi|452209725|ref|YP_007489839.1| - 0.031 13.3 0.1 0.051 12.6 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain GFO_IDH_MocA PF01408.17 gi|452209725|ref|YP_007489839.1| - 0.034 14.6 0.2 0.21 12.0 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold DAO PF01266.19 gi|452209725|ref|YP_007489839.1| - 0.089 11.6 0.1 0.15 10.9 0.1 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase TrkA_N PF02254.13 gi|452209725|ref|YP_007489839.1| - 0.11 12.4 1.8 0.2 11.6 0.1 2.4 3 1 0 3 3 3 0 TrkA-N domain NTP_transferase PF00483.18 gi|452209726|ref|YP_007489840.1| - 3.2e-30 105.2 0.0 4.4e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|452209726|ref|YP_007489840.1| - 5.5e-09 36.2 0.0 1.1e-08 35.3 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.21 gi|452209726|ref|YP_007489840.1| - 0.00073 19.2 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 IspD PF01128.14 gi|452209726|ref|YP_007489840.1| - 0.01 15.3 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Smr PF01713.16 gi|452209726|ref|YP_007489840.1| - 0.014 15.6 0.0 0.066 13.4 0.0 2.0 2 0 0 2 2 2 0 Smr domain CTP_transf_3 PF02348.14 gi|452209726|ref|YP_007489840.1| - 0.05 13.2 0.0 0.083 12.5 0.0 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.16 gi|452209727|ref|YP_007489841.1| - 6.9e-47 159.8 0.0 8.3e-47 159.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|452209727|ref|YP_007489841.1| - 6.2e-20 71.2 0.0 7.3e-20 71.0 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.14 gi|452209727|ref|YP_007489841.1| - 1.7e-19 69.6 0.0 2.1e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|452209727|ref|YP_007489841.1| - 3e-18 65.7 0.4 3.5e-16 58.9 0.3 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|452209727|ref|YP_007489841.1| - 1.4e-17 63.4 0.0 1.5e-12 47.0 0.0 2.3 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.1 gi|452209727|ref|YP_007489841.1| - 2.9e-10 40.4 0.0 4.3e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|452209727|ref|YP_007489841.1| - 5.8e-05 23.0 0.4 0.0017 18.2 0.3 2.7 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|452209727|ref|YP_007489841.1| - 0.0056 15.9 0.3 0.31 10.2 0.0 2.8 2 1 0 2 2 2 1 NmrA-like family NAD_binding_7 PF13241.1 gi|452209727|ref|YP_007489841.1| - 0.0094 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|452209727|ref|YP_007489841.1| - 0.081 12.9 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_2 PF03446.10 gi|452209727|ref|YP_007489841.1| - 0.087 12.6 0.1 0.21 11.4 0.0 1.7 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase KR PF08659.5 gi|452209727|ref|YP_007489841.1| - 0.098 12.3 0.1 0.53 9.9 0.0 1.9 1 1 1 2 2 2 0 KR domain Polysacc_synt PF01943.12 gi|452209728|ref|YP_007489842.1| - 2e-27 96.1 34.6 2e-27 96.1 24.0 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|452209728|ref|YP_007489842.1| - 3.5e-23 82.3 28.3 3.5e-23 82.3 19.6 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|452209728|ref|YP_007489842.1| - 3.3e-18 65.8 20.7 3.3e-18 65.8 14.3 3.9 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|452209728|ref|YP_007489842.1| - 4e-08 32.1 42.9 4e-08 32.1 29.8 2.0 1 1 1 2 2 2 1 MviN-like protein Porphobil_deam PF01379.15 gi|452209729|ref|YP_007489843.1| - 0.12 11.2 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain Glycos_transf_1 PF00534.15 gi|452209730|ref|YP_007489844.1| - 1.1e-27 96.5 0.0 3.7e-27 94.8 0.0 2.0 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209730|ref|YP_007489844.1| - 2.6e-25 89.1 0.0 6.7e-25 87.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452209730|ref|YP_007489844.1| - 5.3e-12 45.8 0.0 1.7e-11 44.2 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209730|ref|YP_007489844.1| - 1.4e-10 41.2 0.0 2.6e-10 40.3 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452209730|ref|YP_007489844.1| - 2.9e-08 34.0 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|452209731|ref|YP_007489845.1| - 1.7e-45 154.4 0.1 3e-45 153.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209731|ref|YP_007489845.1| - 1.3e-17 64.2 0.0 2.2e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452209731|ref|YP_007489845.1| - 1.8e-12 47.3 0.0 3.6e-12 46.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209731|ref|YP_007489845.1| - 1.9e-12 47.2 0.0 5.6e-12 45.7 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452209731|ref|YP_007489845.1| - 9.2e-12 45.3 0.0 1.4e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|452209731|ref|YP_007489845.1| - 0.00011 22.0 0.4 0.00062 19.6 0.2 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|452209732|ref|YP_007489846.1| - 4.6e-28 98.0 0.0 6.9e-28 97.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209732|ref|YP_007489846.1| - 9.5e-18 64.8 0.0 2.1e-17 63.7 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|452209732|ref|YP_007489846.1| - 9.1e-14 51.2 0.0 1.6e-13 50.3 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|452209732|ref|YP_007489846.1| - 1.8e-10 40.8 0.0 3.4e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|452209732|ref|YP_007489846.1| - 6.8e-05 23.1 0.0 0.00016 21.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_5 PF13712.1 gi|452209732|ref|YP_007489846.1| - 0.026 13.7 0.1 0.87 8.7 0.0 2.4 1 1 0 1 1 1 0 Glycosyltransferase like family GNT-I PF03071.10 gi|452209732|ref|YP_007489846.1| - 0.058 11.9 0.0 0.079 11.4 0.0 1.2 1 0 0 1 1 1 0 GNT-I family Anp1 PF03452.9 gi|452209732|ref|YP_007489846.1| - 0.12 11.4 0.0 0.9 8.6 0.0 1.9 1 1 1 2 2 2 0 Anp1 DUF373 PF04123.8 gi|452209733|ref|YP_007489847.1| - 0.0018 17.3 1.6 0.0022 17.0 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DUF1301 PF06979.7 gi|452209733|ref|YP_007489847.1| - 0.16 12.1 1.2 0.23 11.6 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1301) Glycos_transf_2 PF00535.21 gi|452209734|ref|YP_007489848.1| - 6.4e-37 126.8 0.3 9.6e-37 126.2 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209734|ref|YP_007489848.1| - 8.6e-16 58.4 0.0 1.5e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|452209734|ref|YP_007489848.1| - 3.6e-13 49.2 1.0 5.9e-13 48.5 0.7 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452209734|ref|YP_007489848.1| - 0.011 16.0 0.0 0.025 14.8 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|452209735|ref|YP_007489849.1| - 3.4e-48 163.3 0.0 7.3e-48 162.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209735|ref|YP_007489849.1| - 1.6e-23 83.3 0.0 3.7e-23 82.1 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209735|ref|YP_007489849.1| - 1e-21 77.4 0.1 1.4e-21 77.0 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452209735|ref|YP_007489849.1| - 1.6e-17 64.0 0.0 2.1e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|452209735|ref|YP_007489849.1| - 2.5e-16 59.7 0.0 5.1e-16 58.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|452209735|ref|YP_007489849.1| - 1.4e-09 37.9 4.7 2.3e-09 37.2 2.6 1.9 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.6 gi|452209735|ref|YP_007489849.1| - 1e-05 25.1 0.1 7.2e-05 22.4 0.0 2.3 2 1 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.15 gi|452209736|ref|YP_007489850.1| - 1.1e-31 109.6 0.0 2.9e-31 108.1 0.0 1.7 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209736|ref|YP_007489850.1| - 3.8e-24 85.3 0.0 5.9e-24 84.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452209736|ref|YP_007489850.1| - 1e-13 51.3 0.0 3.7e-13 49.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209736|ref|YP_007489850.1| - 1.8e-11 44.0 0.0 3.5e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|452209736|ref|YP_007489850.1| - 2.3e-06 27.5 0.4 3.8e-06 26.7 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|452209736|ref|YP_007489850.1| - 0.00075 19.6 0.0 0.0013 18.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Disaggr_repeat PF06848.6 gi|452209738|ref|YP_007489852.1| - 1.4e-251 826.3 37.3 1e-93 311.8 5.9 4.5 3 1 1 4 4 4 4 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|452209738|ref|YP_007489852.1| - 2.3e-87 291.5 12.7 2.3e-87 291.5 8.8 3.2 3 0 0 3 3 3 1 Disaggregatase related TGFb_propeptide PF00688.13 gi|452209738|ref|YP_007489852.1| - 8.8e-12 44.8 0.0 0.19 10.9 0.0 5.2 5 0 0 5 5 5 5 TGF-beta propeptide Disaggr_assoc PF08480.5 gi|452209740|ref|YP_007489854.1| - 1.2e-101 338.2 7.0 1.2e-101 338.2 4.9 3.3 2 1 2 4 4 4 1 Disaggregatase related Beta_helix PF13229.1 gi|452209740|ref|YP_007489854.1| - 3.8e-15 55.9 46.4 2.8e-11 43.4 19.0 3.4 1 1 1 2 2 2 2 Right handed beta helix region DUF1565 PF07602.6 gi|452209740|ref|YP_007489854.1| - 0.0029 16.7 17.4 0.39 9.8 1.0 3.3 1 1 2 3 3 3 2 Protein of unknown function (DUF1565) YqfD PF06898.6 gi|452209741|ref|YP_007489855.1| - 0.23 10.1 0.7 0.5 9.0 0.5 1.5 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Glycos_transf_2 PF00535.21 gi|452209742|ref|YP_007489856.1| - 1.3e-25 90.0 0.0 2.1e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209742|ref|YP_007489856.1| - 7.3e-07 29.2 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452209742|ref|YP_007489856.1| - 9.2e-06 25.8 0.0 0.00019 21.6 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 DUF373 PF04123.8 gi|452209742|ref|YP_007489856.1| - 0.089 11.8 8.6 0.016 14.2 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.6 gi|452209743|ref|YP_007489857.1| - 4e-97 324.8 1.5 4.5e-97 324.6 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CopD PF05425.8 gi|452209743|ref|YP_007489857.1| - 1.1 9.5 7.3 3.5 7.8 3.8 2.5 1 1 0 1 1 1 0 Copper resistance protein D Abi PF02517.11 gi|452209744|ref|YP_007489858.1| - 1.3e-17 63.6 9.8 1.3e-17 63.6 6.8 2.9 2 1 0 2 2 2 1 CAAX protease self-immunity Tmemb_14 PF03647.8 gi|452209744|ref|YP_007489858.1| - 1.2 9.5 12.2 2.1 8.8 1.2 3.3 3 0 0 3 3 3 0 Transmembrane proteins 14C DUF3675 PF12428.3 gi|452209745|ref|YP_007489859.1| - 0.25 11.6 1.3 0.26 11.5 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Hexapep PF00132.19 gi|452209746|ref|YP_007489860.1| - 1e-34 116.4 24.1 9.5e-09 34.3 1.9 5.2 5 0 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452209746|ref|YP_007489860.1| - 8.1e-14 50.8 24.9 4.5e-06 26.1 3.7 5.2 5 0 0 5 5 5 4 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.8 gi|452209746|ref|YP_007489860.1| - 0.07 13.1 1.5 0.25 11.3 0.4 2.5 2 1 0 2 2 2 0 Polymer-forming cytoskeletal DegT_DnrJ_EryC1 PF01041.12 gi|452209747|ref|YP_007489861.1| - 2.5e-135 451.2 0.1 2.8e-135 451.0 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|452209747|ref|YP_007489861.1| - 2.2e-10 40.1 0.4 5e-10 38.9 0.3 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|452209747|ref|YP_007489861.1| - 1.3e-07 30.3 0.1 3.2e-07 28.9 0.0 1.7 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|452209747|ref|YP_007489861.1| - 9.6e-07 27.8 0.1 0.00022 20.1 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V SelA PF03841.8 gi|452209747|ref|YP_007489861.1| - 0.036 12.7 0.1 0.21 10.2 0.0 2.0 1 1 0 1 1 1 0 L-seryl-tRNA selenium transferase GFO_IDH_MocA PF01408.17 gi|452209748|ref|YP_007489862.1| - 4.2e-26 91.8 1.0 7.3e-26 91.0 0.7 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|452209748|ref|YP_007489862.1| - 3.5e-07 30.0 0.0 6.9e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain UDPG_MGDP_dh_N PF03721.9 gi|452209749|ref|YP_007489863.1| - 4.3e-36 124.0 0.0 9.7e-36 122.8 0.0 1.5 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.10 gi|452209749|ref|YP_007489863.1| - 3.8e-21 75.2 0.0 1.2e-20 73.5 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.14 gi|452209749|ref|YP_007489863.1| - 2.2e-18 66.2 0.0 7e-18 64.6 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain THF_DHG_CYH_C PF02882.14 gi|452209749|ref|YP_007489863.1| - 0.014 14.4 1.2 2.2 7.3 0.1 2.8 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_Gly3P_dh_N PF01210.18 gi|452209749|ref|YP_007489863.1| - 0.038 13.7 0.0 5.7 6.6 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.14 gi|452209749|ref|YP_007489863.1| - 0.049 12.7 0.1 7.8 5.6 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_deac_1 PF01522.16 gi|452209750|ref|YP_007489864.1| - 6.7e-05 22.5 0.0 0.00025 20.6 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide deacetylase Polysacc_synt PF01943.12 gi|452209751|ref|YP_007489865.1| - 2.3e-13 50.0 10.8 2.3e-13 50.0 7.5 3.3 2 2 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|452209751|ref|YP_007489865.1| - 2.2e-08 33.8 14.9 2.2e-08 33.8 10.3 3.1 2 2 0 2 2 2 1 Polysaccharide biosynthesis protein Y_Y_Y PF07495.8 gi|452209752|ref|YP_007489866.1| - 0.00041 20.0 1.4 0.023 14.4 0.0 3.1 3 0 0 3 3 3 1 Y_Y_Y domain Cadherin-like PF12733.2 gi|452209752|ref|YP_007489866.1| - 0.013 15.7 1.1 7.3 6.9 0.0 3.1 2 2 1 3 3 3 0 Cadherin-like beta sandwich domain TIG PF01833.19 gi|452209752|ref|YP_007489866.1| - 0.017 15.1 0.1 0.17 11.8 0.0 2.3 2 0 0 2 2 2 0 IPT/TIG domain BatD PF13584.1 gi|452209752|ref|YP_007489866.1| - 0.018 13.6 0.1 0.11 11.0 0.0 1.9 1 1 1 2 2 2 0 Oxygen tolerance LEA_2 PF03168.8 gi|452209752|ref|YP_007489866.1| - 0.02 15.2 0.2 0.12 12.7 0.0 2.2 1 1 1 2 2 2 0 Late embryogenesis abundant protein Ribosomal_L31 PF01197.13 gi|452209753|ref|YP_007489867.1| - 0.079 12.9 0.0 0.21 11.5 0.0 1.7 1 0 0 1 1 1 0 Ribosomal protein L31 Acylphosphatase PF00708.13 gi|452209754|ref|YP_007489868.1| - 2.6e-23 81.9 0.1 4.2e-23 81.2 0.1 1.3 1 0 0 1 1 1 1 Acylphosphatase LPP PF04728.8 gi|452209754|ref|YP_007489868.1| - 0.046 13.5 0.0 4.5 7.1 0.0 2.7 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DUF1115 PF06544.7 gi|452209754|ref|YP_007489868.1| - 0.059 13.0 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1115) BLOC1_2 PF10046.4 gi|452209754|ref|YP_007489868.1| - 0.087 12.9 0.0 0.44 10.7 0.0 2.3 3 0 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HSBP1 PF06825.7 gi|452209754|ref|YP_007489868.1| - 0.092 12.3 3.0 6.7 6.3 0.6 4.0 2 1 1 3 3 3 0 Heat shock factor binding protein 1 DUF2884 PF11101.3 gi|452209754|ref|YP_007489868.1| - 0.15 11.4 0.3 2.3 7.5 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2884) DUF552 PF04472.7 gi|452209754|ref|YP_007489868.1| - 3.1 7.7 5.5 14 5.6 0.1 3.5 2 1 2 4 4 4 0 Protein of unknown function (DUF552) OMP_b-brl_2 PF13568.1 gi|452209755|ref|YP_007489869.1| - 0.047 13.4 0.1 0.047 13.4 0.1 1.0 1 0 0 1 1 1 0 Outer membrane protein beta-barrel domain NTP_transf_2 PF01909.18 gi|452209756|ref|YP_007489870.1| - 7.6e-11 42.2 1.0 1.8e-10 40.9 0.7 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|452209756|ref|YP_007489870.1| - 0.067 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF86 PF01934.12 gi|452209757|ref|YP_007489871.1| - 5.1e-25 87.4 0.1 5.9e-25 87.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Epimerase PF01370.16 gi|452209758|ref|YP_007489872.1| - 1.3e-63 214.5 0.1 1.7e-63 214.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|452209758|ref|YP_007489872.1| - 9.6e-24 83.5 0.0 1.3e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|452209758|ref|YP_007489872.1| - 6.4e-19 67.9 0.0 3.3e-18 65.6 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|452209758|ref|YP_007489872.1| - 1e-16 60.7 0.0 1.3e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|452209758|ref|YP_007489872.1| - 4.9e-10 38.7 0.0 5.5e-06 25.5 0.0 2.1 2 0 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.1 gi|452209758|ref|YP_007489872.1| - 6.6e-10 39.2 0.2 1.6e-09 38.0 0.1 1.6 1 1 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|452209758|ref|YP_007489872.1| - 5.1e-09 36.2 0.0 9.3e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|452209758|ref|YP_007489872.1| - 2.5e-07 30.1 0.0 3.4e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|452209758|ref|YP_007489872.1| - 0.0014 18.3 0.0 0.0026 17.4 0.0 1.6 1 1 0 1 1 1 1 KR domain ApbA PF02558.11 gi|452209758|ref|YP_007489872.1| - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|452209758|ref|YP_007489872.1| - 0.0043 17.4 0.0 0.0084 16.5 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|452209758|ref|YP_007489872.1| - 0.0067 16.1 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|452209758|ref|YP_007489872.1| - 0.0081 15.5 0.1 0.023 14.0 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.13 gi|452209758|ref|YP_007489872.1| - 0.014 15.4 0.2 0.033 14.1 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain DapB_N PF01113.15 gi|452209758|ref|YP_007489872.1| - 0.022 14.7 0.2 0.044 13.7 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pyr_redox PF00070.22 gi|452209758|ref|YP_007489872.1| - 0.029 14.7 0.0 0.11 12.9 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.9 gi|452209758|ref|YP_007489872.1| - 0.057 13.2 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|452209758|ref|YP_007489872.1| - 0.074 11.9 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|452209758|ref|YP_007489872.1| - 0.086 12.8 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NTP_transf_2 PF01909.18 gi|452209760|ref|YP_007489874.1| - 3.8e-14 52.7 0.4 5.1e-14 52.3 0.2 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|452209760|ref|YP_007489874.1| - 0.018 15.1 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm Adenyl_cycl_N PF12633.2 gi|452209760|ref|YP_007489874.1| - 0.027 14.0 0.0 0.032 13.7 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain DUF86 PF01934.12 gi|452209761|ref|YP_007489875.1| - 2.9e-27 94.6 0.1 3.4e-27 94.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 L27_1 PF09058.5 gi|452209761|ref|YP_007489875.1| - 0.21 11.4 1.6 0.59 10.0 0.3 2.3 2 1 1 3 3 3 0 L27_1 dTDP_sugar_isom PF00908.12 gi|452209763|ref|YP_007489877.1| - 1.4e-56 190.5 0.0 1.7e-56 190.3 0.0 1.1 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Epimerase PF01370.16 gi|452209764|ref|YP_007489878.1| - 1.7e-59 201.1 0.0 2.4e-59 200.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|452209764|ref|YP_007489878.1| - 1.4e-19 70.0 0.0 9.4e-19 67.3 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|452209764|ref|YP_007489878.1| - 4.9e-17 61.5 0.0 7.1e-17 61.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|452209764|ref|YP_007489878.1| - 1.6e-16 60.0 0.0 2e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|452209764|ref|YP_007489878.1| - 1.7e-15 56.6 0.0 2.2e-15 56.2 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 gi|452209764|ref|YP_007489878.1| - 1.4e-05 25.1 0.0 2e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 NADH(P)-binding RmlD_sub_bind PF04321.12 gi|452209765|ref|YP_007489879.1| - 4.8e-91 304.6 0.0 5.8e-91 304.3 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|452209765|ref|YP_007489879.1| - 1.1e-16 60.9 0.0 8.3e-16 58.1 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|452209765|ref|YP_007489879.1| - 2.1e-10 39.9 0.5 2.8e-09 36.2 0.0 2.8 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|452209765|ref|YP_007489879.1| - 9.5e-07 27.9 0.0 1.4e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.14 gi|452209765|ref|YP_007489879.1| - 3.6e-06 25.8 0.4 2.3e-05 23.2 0.1 2.1 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase_2 PF02350.14 gi|452209766|ref|YP_007489880.1| - 6.7e-42 143.4 0.0 8.9e-42 143.0 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase NTP_transferase PF00483.18 gi|452209766|ref|YP_007489880.1| - 6.9e-14 51.7 0.0 8.8e-14 51.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|452209766|ref|YP_007489880.1| - 7.9e-06 26.0 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain ADH_zinc_N PF00107.21 gi|452209767|ref|YP_007489881.1| - 3.1e-17 62.3 0.2 1.6e-16 60.0 0.0 2.3 2 1 0 2 2 2 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|452209767|ref|YP_007489881.1| - 2.3e-05 23.8 0.3 5.6e-05 22.5 0.0 1.7 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|452209767|ref|YP_007489881.1| - 0.0013 18.4 0.1 0.025 14.2 0.0 2.6 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|452209767|ref|YP_007489881.1| - 0.0016 17.6 0.1 0.0026 16.9 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|452209767|ref|YP_007489881.1| - 0.0024 17.8 0.2 0.0059 16.6 0.1 1.6 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_18 PF12847.2 gi|452209767|ref|YP_007489881.1| - 0.012 16.2 0.0 0.025 15.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain ADH_N PF08240.7 gi|452209767|ref|YP_007489881.1| - 0.04 13.6 2.6 0.12 12.1 0.1 2.2 1 1 0 2 2 2 0 Alcohol dehydrogenase GroES-like domain Methyltransf_11 PF08241.7 gi|452209767|ref|YP_007489881.1| - 0.093 13.2 0.0 0.22 12.0 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Prenyltrans_1 PF13243.1 gi|452209768|ref|YP_007489882.1| - 3.4e-12 46.3 0.0 0.00036 20.4 0.0 3.4 1 1 3 4 4 4 4 Prenyltransferase-like Prenyltrans_2 PF13249.1 gi|452209768|ref|YP_007489882.1| - 1.6e-09 38.1 0.0 0.00058 20.2 0.0 2.9 1 1 2 3 3 3 3 Prenyltransferase-like Prenyltrans PF00432.16 gi|452209768|ref|YP_007489882.1| - 7.9e-05 22.1 0.0 0.00046 19.7 0.0 2.3 2 0 0 2 2 2 1 Prenyltransferase and squalene oxidase repeat Pec_lyase PF09492.5 gi|452209768|ref|YP_007489882.1| - 0.00016 20.9 1.0 3.1 6.8 0.1 3.7 2 1 1 3 3 3 3 Pectic acid lyase Glyco_hydro_88 PF07470.8 gi|452209768|ref|YP_007489882.1| - 0.012 14.6 0.1 0.029 13.4 0.0 1.6 2 0 0 2 2 2 0 Glycosyl Hydrolase Family 88 Glycos_transf_1 PF00534.15 gi|452209769|ref|YP_007489883.1| - 5.3e-21 74.7 0.0 7.9e-21 74.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452209769|ref|YP_007489883.1| - 4.3e-19 68.9 0.0 7.6e-19 68.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452209769|ref|YP_007489883.1| - 2.3e-10 40.6 0.0 4.6e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452209769|ref|YP_007489883.1| - 0.00016 21.4 0.0 0.00031 20.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|452209769|ref|YP_007489883.1| - 0.083 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|452209770|ref|YP_007489884.1| - 4.2e-19 68.8 0.0 6.1e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209770|ref|YP_007489884.1| - 2.1e-07 31.0 0.1 2.8e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Amidase_3 PF01520.13 gi|452209770|ref|YP_007489884.1| - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase FTP PF07504.8 gi|452209770|ref|YP_007489884.1| - 0.23 10.9 1.0 8.8 5.8 0.0 2.9 3 0 0 3 3 3 0 Fungalysin/Thermolysin Propeptide Motif Tiny_TM_bacill PF09680.5 gi|452209770|ref|YP_007489884.1| - 0.43 10.0 3.5 1.2 8.6 2.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (Tiny_TM_bacill) Glycos_transf_2 PF00535.21 gi|452209771|ref|YP_007489885.1| - 2.9e-17 62.8 0.0 4.3e-17 62.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452209771|ref|YP_007489885.1| - 5.1e-06 26.4 0.0 7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452209771|ref|YP_007489885.1| - 0.053 13.8 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF373 PF04123.8 gi|452209771|ref|YP_007489885.1| - 0.12 11.4 2.7 0.88 8.5 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.6 gi|452209773|ref|YP_007489887.1| - 4.8e-114 380.3 2.7 5.4e-114 380.1 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) 7tm_3 PF00003.17 gi|452209773|ref|YP_007489887.1| - 0.0037 16.6 0.0 0.0062 15.9 0.0 1.4 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR Abi PF02517.11 gi|452209774|ref|YP_007489888.1| - 5.4e-17 61.7 7.7 5.4e-17 61.7 5.3 3.2 3 1 0 3 3 3 2 CAAX protease self-immunity OCIA PF07051.6 gi|452209774|ref|YP_007489888.1| - 0.27 10.6 4.8 0.38 10.1 0.2 2.5 1 1 0 2 2 2 0 Ovarian carcinoma immunoreactive antigen (OCIA) NUMOD4 PF07463.6 gi|452209776|ref|YP_007489890.1| - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 NUMOD4 motif DUF2069 PF09842.4 gi|452209777|ref|YP_007489891.1| - 0.008 16.1 0.2 0.011 15.6 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2069) Y_Y_Y PF07495.8 gi|452209778|ref|YP_007489892.1| - 0.0035 17.0 0.3 0.092 12.5 0.0 2.8 3 0 0 3 3 3 1 Y_Y_Y domain FlgD_ig PF13860.1 gi|452209778|ref|YP_007489892.1| - 0.0052 16.4 0.1 0.023 14.3 0.1 2.1 1 1 0 1 1 1 1 FlgD Ig-like domain PBP_sp32 PF07222.7 gi|452209778|ref|YP_007489892.1| - 0.012 14.7 0.7 0.021 13.9 0.5 1.3 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF2271 PF10029.4 gi|452209778|ref|YP_007489892.1| - 0.025 14.0 0.1 0.057 12.9 0.1 1.5 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Big_3_4 PF13754.1 gi|452209778|ref|YP_007489892.1| - 0.67 10.3 4.9 10 6.5 1.0 3.6 2 1 2 4 4 4 0 Bacterial Ig-like domain (group 3) DUF1616 PF07760.6 gi|452209780|ref|YP_007489894.1| - 8.8e-104 346.6 1.7 1e-103 346.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Uroplakin_II PF07353.7 gi|452209780|ref|YP_007489894.1| - 0.84 8.9 4.3 0.15 11.3 0.1 1.8 2 1 1 3 3 3 0 Uroplakin II Abi PF02517.11 gi|452209781|ref|YP_007489895.1| - 1.6e-17 63.4 8.9 1.6e-17 63.4 6.2 2.4 2 1 0 2 2 2 1 CAAX protease self-immunity DUF1212 PF06738.7 gi|452209781|ref|YP_007489895.1| - 8 5.8 10.7 8.4 5.8 1.7 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1212) Y_Y_Y PF07495.8 gi|452209782|ref|YP_007489896.1| - 0.0026 17.4 0.0 0.012 15.3 0.0 2.2 2 0 0 2 2 2 1 Y_Y_Y domain CopC PF04234.7 gi|452209782|ref|YP_007489896.1| - 0.063 13.8 0.0 0.14 12.8 0.0 1.6 1 0 0 1 1 1 0 CopC domain Filamin PF00630.14 gi|452209782|ref|YP_007489896.1| - 0.064 13.8 0.3 0.54 10.8 0.0 2.3 1 1 1 2 2 2 0 Filamin/ABP280 repeat DUF2407_C PF13373.1 gi|452209782|ref|YP_007489896.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 DUF2407 C-terminal domain ABC2_membrane_4 PF12730.2 gi|452209782|ref|YP_007489896.1| - 0.11 11.7 0.2 0.077 12.1 0.2 1.2 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF3244 PF11589.3 gi|452209782|ref|YP_007489896.1| - 0.13 12.0 0.2 0.59 9.8 0.0 2.1 2 1 1 3 3 3 0 Domain of unknown function (DUF3244) DUF1624 PF07786.7 gi|452209784|ref|YP_007489898.1| - 2e-48 164.6 7.3 2.3e-48 164.4 5.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.17 gi|452209784|ref|YP_007489898.1| - 0.0025 16.7 17.7 0.0077 15.1 12.2 1.7 1 1 0 1 1 1 1 Acyltransferase family DUF4199 PF13858.1 gi|452209785|ref|YP_007489899.1| - 0.18 11.7 2.4 0.18 11.7 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Ribosomal_S17e PF00833.13 gi|452209788|ref|YP_007489902.1| - 4.5e-16 58.7 2.7 5e-16 58.5 1.9 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.17 gi|452209789|ref|YP_007489903.1| - 3.4e-102 340.9 0.0 3.8e-102 340.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ThiG PF05690.9 gi|452209789|ref|YP_007489903.1| - 0.04 12.9 0.0 0.07 12.1 0.0 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG DapB_C PF05173.9 gi|452209790|ref|YP_007489904.1| - 1.7e-49 166.9 0.1 2.4e-49 166.5 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.15 gi|452209790|ref|YP_007489904.1| - 5.8e-33 113.4 2.0 9.1e-33 112.8 1.4 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|452209790|ref|YP_007489904.1| - 0.021 15.1 0.5 0.063 13.5 0.2 2.0 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain 3Beta_HSD PF01073.14 gi|452209790|ref|YP_007489904.1| - 0.022 13.4 0.7 0.031 12.9 0.5 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family GFO_IDH_MocA PF01408.17 gi|452209790|ref|YP_007489904.1| - 0.027 14.9 0.4 0.82 10.2 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold LPAM_2 PF13627.1 gi|452209790|ref|YP_007489904.1| - 0.22 11.2 0.2 0.22 11.2 0.1 2.4 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site DUF1673 PF07895.6 gi|452209793|ref|YP_007489907.1| - 2.8e-70 236.0 15.8 1e-69 234.1 11.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF4131 PF13567.1 gi|452209793|ref|YP_007489907.1| - 5.3 6.4 15.6 8.1 5.8 7.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF454 PF04304.8 gi|452209793|ref|YP_007489907.1| - 5.8 7.0 11.5 1.1 9.2 2.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF454) DUF1673 PF07895.6 gi|452209794|ref|YP_007489908.1| - 1.3e-72 243.6 7.4 3.3e-65 219.4 1.4 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1673) DUF872 PF05915.7 gi|452209794|ref|YP_007489908.1| - 0.0066 16.2 0.2 0.012 15.4 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) OppC_N PF12911.2 gi|452209794|ref|YP_007489908.1| - 0.018 14.3 0.6 0.041 13.2 0.4 1.5 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF1889 PF08986.5 gi|452209794|ref|YP_007489908.1| - 0.07 13.3 0.0 0.26 11.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1889) DUF4131 PF13567.1 gi|452209794|ref|YP_007489908.1| - 0.078 12.3 2.4 0.2 11.0 1.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) PrgI PF12666.2 gi|452209794|ref|YP_007489908.1| - 0.32 11.1 5.4 6.3 7.0 0.1 2.3 1 1 1 2 2 2 0 PrgI family protein Na_Ca_ex PF01699.19 gi|452209794|ref|YP_007489908.1| - 1.5 8.3 6.2 1.7 8.2 3.8 1.5 1 1 0 1 1 1 0 Sodium/calcium exchanger protein DUF1673 PF07895.6 gi|452209795|ref|YP_007489909.1| - 2.7e-63 213.2 2.6 3.1e-63 213.0 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) DUF872 PF05915.7 gi|452209795|ref|YP_007489909.1| - 0.045 13.6 0.4 0.07 12.9 0.3 1.4 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) NMN_transporter PF04973.7 gi|452209795|ref|YP_007489909.1| - 0.088 12.2 7.0 0.13 11.7 4.9 1.2 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter DUF2976 PF11190.3 gi|452209795|ref|YP_007489909.1| - 0.17 11.4 1.8 0.31 10.5 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) DUF4097 PF13349.1 gi|452209795|ref|YP_007489909.1| - 0.59 9.6 4.3 2.4 7.6 0.9 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4097) DUF2985 PF11204.3 gi|452209795|ref|YP_007489909.1| - 1.1 9.0 6.3 0.45 10.3 1.0 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2985) DUF4131 PF13567.1 gi|452209795|ref|YP_007489909.1| - 1.6 8.0 9.4 6.3 6.1 1.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF3671 PF12420.3 gi|452209795|ref|YP_007489909.1| - 3.6 7.5 7.6 12 5.9 2.2 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF3353 PF11833.3 gi|452209795|ref|YP_007489909.1| - 4 6.8 6.1 20 4.5 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3353) PrgI PF12666.2 gi|452209795|ref|YP_007489909.1| - 8.1 6.6 10.0 6.4 6.9 2.9 2.2 1 1 1 2 2 2 0 PrgI family protein PyrI PF01948.13 gi|452209796|ref|YP_007489910.1| - 5.3e-20 71.2 0.4 7.3e-20 70.8 0.3 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|452209796|ref|YP_007489910.1| - 1.7e-17 62.5 3.7 1.7e-17 62.5 2.5 1.5 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain LAM_C PF12544.3 gi|452209796|ref|YP_007489910.1| - 0.11 12.4 0.3 3.3 7.7 0.0 2.1 2 0 0 2 2 2 0 Lysine-2,3-aminomutase DNA_ligase_ZBD PF03119.11 gi|452209796|ref|YP_007489910.1| - 0.29 10.8 1.5 0.63 9.8 0.1 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain OTCace_N PF02729.16 gi|452209797|ref|YP_007489911.1| - 8.6e-45 151.8 0.0 5e-44 149.4 0.0 2.0 2 1 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|452209797|ref|YP_007489911.1| - 4.2e-38 130.6 0.0 5.6e-38 130.2 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Methyltransf_6 PF03737.10 gi|452209799|ref|YP_007489913.1| - 1.2e-35 122.6 1.1 1.2e-35 122.6 0.8 2.2 2 0 0 2 2 2 1 Demethylmenaquinone methyltransferase OMPdecase PF00215.19 gi|452209799|ref|YP_007489913.1| - 2.6e-17 63.0 5.0 6.5e-17 61.6 3.5 1.8 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.9 gi|452209799|ref|YP_007489913.1| - 6.8e-07 28.4 2.0 6.8e-07 28.4 1.4 1.8 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.16 gi|452209799|ref|YP_007489913.1| - 2.7e-06 26.8 2.6 1.4e-05 24.5 0.9 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|452209799|ref|YP_007489913.1| - 7.2e-05 22.1 7.6 0.00049 19.4 0.9 3.3 2 1 1 3 3 3 1 PcrB family PEP_mutase PF13714.1 gi|452209799|ref|YP_007489913.1| - 0.0012 18.1 2.2 0.033 13.3 0.1 2.7 1 1 2 3 3 3 2 Phosphoenolpyruvate phosphomutase HMGL-like PF00682.14 gi|452209799|ref|YP_007489913.1| - 0.0028 17.3 1.2 0.034 13.8 0.1 2.3 1 1 1 2 2 2 1 HMGL-like Peripla_BP_4 PF13407.1 gi|452209799|ref|YP_007489913.1| - 0.024 13.9 1.5 0.038 13.3 1.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain ADH_zinc_N PF00107.21 gi|452209799|ref|YP_007489913.1| - 0.029 13.8 2.6 2.6 7.6 0.2 2.6 1 1 1 2 2 2 0 Zinc-binding dehydrogenase Ribul_P_3_epim PF00834.14 gi|452209799|ref|YP_007489913.1| - 0.055 12.5 1.5 0.51 9.4 0.1 2.4 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family TPP_enzyme_M PF00205.17 gi|452209799|ref|YP_007489913.1| - 0.055 13.2 2.1 0.57 9.9 0.1 3.0 2 2 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain DUF1628 PF07790.6 gi|452209800|ref|YP_007489914.1| - 0.023 15.4 0.1 0.051 14.3 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) RQC PF09382.5 gi|452209801|ref|YP_007489915.1| - 2.9e-29 100.9 0.0 9e-29 99.3 0.0 1.9 1 0 0 1 1 1 1 RQC domain DEAD PF00270.24 gi|452209801|ref|YP_007489915.1| - 9.7e-21 73.9 0.0 2.8e-19 69.2 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase HRDC PF00570.18 gi|452209801|ref|YP_007489915.1| - 2.1e-20 72.2 0.0 4.3e-20 71.1 0.0 1.6 1 0 0 1 1 1 1 HRDC domain Helicase_C PF00271.26 gi|452209801|ref|YP_007489915.1| - 8.3e-19 67.2 0.5 4.8e-17 61.5 0.0 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain HTH_40 PF14493.1 gi|452209801|ref|YP_007489915.1| - 1.7e-10 40.9 0.6 5.1e-10 39.4 0.4 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Helicase_Sgs1 PF11408.3 gi|452209801|ref|YP_007489915.1| - 1.1e-06 28.3 0.0 2.5e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 Sgs1 RecQ helicase ResIII PF04851.10 gi|452209801|ref|YP_007489915.1| - 0.0029 17.4 0.0 0.027 14.2 0.0 2.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Sigma70_r4_2 PF08281.7 gi|452209801|ref|YP_007489915.1| - 0.073 12.5 0.0 0.24 10.8 0.0 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 GMP_synt_C PF00958.17 gi|452209802|ref|YP_007489916.1| - 3.6e-30 103.5 0.0 8e-30 102.4 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|452209802|ref|YP_007489916.1| - 2.1e-09 36.6 0.0 0.00012 21.1 0.0 2.1 2 0 0 2 2 2 2 NAD synthase Asn_synthase PF00733.16 gi|452209802|ref|YP_007489916.1| - 0.00021 20.8 0.1 0.00056 19.4 0.0 1.6 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.8 gi|452209802|ref|YP_007489916.1| - 0.00046 19.5 0.0 0.00096 18.4 0.0 1.5 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|452209802|ref|YP_007489916.1| - 0.0011 17.5 0.0 0.033 12.7 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.14 gi|452209802|ref|YP_007489916.1| - 0.0058 16.4 0.0 0.0088 15.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.9 gi|452209802|ref|YP_007489916.1| - 0.018 14.5 0.1 0.04 13.3 0.0 1.7 2 1 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Radical_SAM PF04055.16 gi|452209803|ref|YP_007489917.1| - 1.9e-07 31.3 0.0 3.8e-07 30.4 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily ELYS PF13934.1 gi|452209803|ref|YP_007489917.1| - 0.044 13.5 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Nuclear pore complex assembly AgrD PF05931.6 gi|452209803|ref|YP_007489917.1| - 0.12 12.0 0.2 1.6 8.4 0.0 2.4 2 0 0 2 2 2 0 Staphylococcal AgrD protein AA_kinase PF00696.23 gi|452209804|ref|YP_007489918.1| - 3.8e-41 141.2 5.3 4.3e-41 141.0 3.7 1.0 1 0 0 1 1 1 1 Amino acid kinase family MC1 PF05854.6 gi|452209805|ref|YP_007489919.1| - 2e-47 159.1 1.8 2.2e-47 158.9 1.3 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 GCHY-1 PF02649.9 gi|452209806|ref|YP_007489920.1| - 7.8e-94 313.9 2.4 8.8e-94 313.8 1.6 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.13 gi|452209806|ref|YP_007489920.1| - 0.0057 16.8 1.0 0.51 10.5 0.0 3.4 4 1 0 4 4 4 1 Dihydroneopterin aldolase DUF2098 PF09871.4 gi|452209808|ref|YP_007489922.1| - 1.5e-29 101.8 2.1 1.7e-29 101.5 1.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) DUF2114 PF09887.4 gi|452209809|ref|YP_007489923.1| - 3.8e-229 760.4 6.2 4.5e-229 760.2 4.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) FrhB_FdhB_C PF04432.8 gi|452209810|ref|YP_007489924.1| - 7.7e-43 145.6 0.0 7.7e-43 145.6 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|452209810|ref|YP_007489924.1| - 2.8e-26 91.1 0.0 6.7e-26 89.9 0.0 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.8 gi|452209810|ref|YP_007489924.1| - 4.7e-11 42.3 3.1 7.5e-11 41.7 1.4 1.9 2 0 0 2 2 2 1 YHS domain Fer4_7 PF12838.2 gi|452209810|ref|YP_007489924.1| - 0.0045 17.3 10.8 0.057 13.8 0.6 3.1 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452209810|ref|YP_007489924.1| - 0.0058 16.6 12.6 0.21 11.6 1.5 3.0 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209810|ref|YP_007489924.1| - 0.0062 16.3 14.1 0.0065 16.2 8.0 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain zf-FCS PF06467.9 gi|452209810|ref|YP_007489924.1| - 0.0068 16.0 3.3 0.0068 16.0 2.3 2.7 4 0 0 4 4 2 1 MYM-type Zinc finger with FCS sequence motif Fer4_15 PF13459.1 gi|452209810|ref|YP_007489924.1| - 0.028 14.9 5.1 3 8.4 0.1 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.22 gi|452209810|ref|YP_007489924.1| - 0.065 12.8 18.0 0.14 11.8 2.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452209810|ref|YP_007489924.1| - 0.17 12.1 16.3 0.31 11.3 1.9 2.7 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209810|ref|YP_007489924.1| - 0.17 12.6 12.4 1.6 9.5 0.5 3.2 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|452209810|ref|YP_007489924.1| - 0.24 11.3 15.3 0.14 12.0 1.4 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain DUF581 PF04570.9 gi|452209810|ref|YP_007489924.1| - 0.35 10.1 4.8 0.67 9.2 1.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF581) Fer4_17 PF13534.1 gi|452209810|ref|YP_007489924.1| - 0.36 11.2 17.3 0.84 10.0 2.0 3.0 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209810|ref|YP_007489924.1| - 0.51 10.2 10.9 1.8 8.4 7.5 2.0 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209810|ref|YP_007489924.1| - 1.3 9.4 22.3 0.2 12.0 0.7 3.5 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209810|ref|YP_007489924.1| - 1.8 8.6 18.0 0.46 10.5 2.1 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Glu-tRNAGln PF02686.10 gi|452209811|ref|YP_007489925.1| - 2.3e-21 75.3 0.4 2.8e-21 75.1 0.3 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.16 gi|452209812|ref|YP_007489926.1| - 1e-156 522.2 0.0 1.1e-156 522.1 0.0 1.0 1 0 0 1 1 1 1 Amidase GatB_N PF02934.10 gi|452209813|ref|YP_007489927.1| - 2.7e-113 377.6 0.0 3.5e-113 377.2 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|452209813|ref|YP_007489927.1| - 5.8e-49 165.6 0.2 9e-49 164.9 0.1 1.3 1 0 0 1 1 1 1 GatB domain CN_hydrolase PF00795.17 gi|452209814|ref|YP_007489928.1| - 1.5e-22 79.8 0.0 1.9e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Methyltransf_31 PF13847.1 gi|452209815|ref|YP_007489929.1| - 1.5e-23 83.0 0.0 1.8e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209815|ref|YP_007489929.1| - 5.7e-16 58.7 0.0 7.9e-16 58.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209815|ref|YP_007489929.1| - 9.3e-14 51.4 0.0 1.1e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452209815|ref|YP_007489929.1| - 2.4e-11 43.9 0.0 3.4e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209815|ref|YP_007489929.1| - 3.2e-10 40.5 0.0 4.2e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209815|ref|YP_007489929.1| - 4.9e-10 39.6 0.0 6.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209815|ref|YP_007489929.1| - 1.1e-08 34.5 0.0 1.3e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|452209815|ref|YP_007489929.1| - 2.6e-08 33.9 0.0 3.8e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|452209815|ref|YP_007489929.1| - 7.5e-07 28.7 0.0 9.9e-07 28.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.9 gi|452209815|ref|YP_007489929.1| - 1.9e-06 27.3 0.0 2e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Fibrillarin PF01269.12 gi|452209815|ref|YP_007489929.1| - 6e-06 25.3 0.0 7.3e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin FtsJ PF01728.14 gi|452209815|ref|YP_007489929.1| - 3.9e-05 23.7 0.0 6.2e-05 23.0 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase PrmA PF06325.8 gi|452209815|ref|YP_007489929.1| - 6.9e-05 22.1 0.0 7.7e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.9 gi|452209815|ref|YP_007489929.1| - 0.00023 20.3 0.0 0.00032 19.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.14 gi|452209815|ref|YP_007489929.1| - 0.00035 20.1 0.0 0.0004 19.9 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FmrO PF07091.6 gi|452209815|ref|YP_007489929.1| - 0.00055 19.0 0.0 0.00064 18.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) CMAS PF02353.15 gi|452209815|ref|YP_007489929.1| - 0.00076 18.6 0.0 0.00099 18.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TPMT PF05724.6 gi|452209815|ref|YP_007489929.1| - 0.015 14.7 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) GCD14 PF08704.5 gi|452209815|ref|YP_007489929.1| - 0.05 13.0 0.0 0.08 12.4 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Met_10 PF02475.11 gi|452209815|ref|YP_007489929.1| - 0.051 13.1 0.0 0.066 12.7 0.0 1.3 1 1 0 1 1 1 0 Met-10+ like-protein Methyltransf_29 PF03141.11 gi|452209815|ref|YP_007489929.1| - 0.055 11.8 0.1 0.38 9.0 0.0 1.7 1 1 1 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_24 PF13578.1 gi|452209815|ref|YP_007489929.1| - 0.093 13.5 0.0 0.13 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Chlorovi_GP_rpt PF06598.6 gi|452209816|ref|YP_007489930.1| - 0.059 13.2 0.8 0.072 12.9 0.5 1.3 1 1 0 1 1 1 0 Chlorovirus glycoprotein repeat RibD_C PF01872.12 gi|452209818|ref|YP_007489932.1| - 2.9e-22 79.2 0.0 9.2e-16 58.0 0.0 2.1 1 1 1 2 2 2 2 RibD C-terminal domain DHFR_1 PF00186.14 gi|452209818|ref|YP_007489932.1| - 2.2e-08 33.8 0.0 2.7e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Dihydrofolate reductase NTS PF15447.1 gi|452209818|ref|YP_007489932.1| - 0.047 14.0 0.0 0.11 12.8 0.0 1.6 2 0 0 2 2 2 0 N-terminal segments of PfEMP1 Mrr_cat PF04471.7 gi|452209819|ref|YP_007489933.1| - 3.9e-36 123.3 0.0 6.7e-36 122.6 0.0 1.4 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.1 gi|452209819|ref|YP_007489933.1| - 9.5e-31 105.7 0.1 1.9e-30 104.7 0.0 1.5 1 0 0 1 1 1 1 Mrr N-terminal domain Peptidase_M48 PF01435.13 gi|452209821|ref|YP_007489935.1| - 2e-23 83.1 0.0 2.3e-23 82.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|452209821|ref|YP_007489935.1| - 6.5e-05 22.0 0.0 9e-05 21.5 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 CitMHS PF03600.11 gi|452209821|ref|YP_007489935.1| - 0.011 14.3 0.0 0.027 13.0 0.0 1.7 1 1 0 1 1 1 0 Citrate transporter cNMP_binding PF00027.24 gi|452209821|ref|YP_007489935.1| - 0.072 12.9 0.0 1.2 9.0 0.0 2.2 2 0 0 2 2 2 0 Cyclic nucleotide-binding domain SprT-like PF10263.4 gi|452209821|ref|YP_007489935.1| - 0.14 11.7 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 SprT-like family DUF2201_N PF13203.1 gi|452209821|ref|YP_007489935.1| - 0.18 10.9 0.1 0.25 10.4 0.0 1.3 1 0 0 1 1 1 0 Putative metallopeptidase domain PrgI PF12666.2 gi|452209821|ref|YP_007489935.1| - 0.48 10.6 3.4 4.5 7.4 0.4 2.3 2 0 0 2 2 2 0 PrgI family protein Yip1 PF04893.12 gi|452209821|ref|YP_007489935.1| - 0.81 9.1 10.7 0.11 11.9 0.7 2.2 2 0 0 2 2 2 0 Yip1 domain DUF1282 PF06930.7 gi|452209821|ref|YP_007489935.1| - 3.9 7.1 9.5 0.41 10.2 1.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1282) Thymidylat_synt PF00303.14 gi|452209822|ref|YP_007489936.1| - 1e-36 126.3 0.0 1.3e-35 122.7 0.0 1.9 1 1 0 1 1 1 1 Thymidylate synthase EPSP_synthase PF00275.15 gi|452209823|ref|YP_007489937.1| - 3.7e-107 358.3 1.0 4.5e-107 358.0 0.7 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MTS PF05175.9 gi|452209824|ref|YP_007489938.1| - 3e-06 26.7 0.0 5.1e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|452209824|ref|YP_007489938.1| - 1.7e-05 24.0 0.0 4.4e-05 22.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|452209824|ref|YP_007489938.1| - 0.00067 19.6 0.0 0.0013 18.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|452209824|ref|YP_007489938.1| - 0.0023 17.3 0.0 0.0039 16.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.2 gi|452209824|ref|YP_007489938.1| - 0.0082 16.7 0.0 0.017 15.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209824|ref|YP_007489938.1| - 0.024 14.2 0.1 0.27 10.7 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain CbiA PF01656.18 gi|452209824|ref|YP_007489938.1| - 0.034 13.5 0.0 0.074 12.4 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain MCR_alpha_N PF02745.10 gi|452209825|ref|YP_007489939.1| - 9.1e-147 487.3 1.2 1.2e-146 486.9 0.8 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|452209825|ref|YP_007489939.1| - 2.3e-65 218.3 4.0 7.5e-65 216.6 2.8 1.9 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.11 gi|452209826|ref|YP_007489940.1| - 4e-115 383.1 0.1 4.5e-115 383.0 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.7 gi|452209827|ref|YP_007489941.1| - 3.3e-43 147.4 4.1 6.4e-37 126.8 1.7 2.8 1 1 1 2 2 2 2 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.9 gi|452209828|ref|YP_007489942.1| - 5.9e-56 188.2 0.1 6.8e-56 188.0 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.13 gi|452209829|ref|YP_007489943.1| - 2.4e-129 430.0 6.5 3.8e-129 429.3 4.5 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|452209829|ref|YP_007489943.1| - 7.1e-72 240.7 2.5 7.1e-72 240.7 1.7 1.8 2 0 0 2 2 2 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain PolC_DP2 PF03833.8 gi|452209831|ref|YP_007489945.1| - 0 1215.9 0.2 0 1215.2 0.0 1.3 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 TerY-C PF15616.1 gi|452209831|ref|YP_007489945.1| - 0.00023 21.0 2.7 0.00023 21.0 1.9 2.5 2 0 0 2 2 2 1 TerY-C metal binding domain HTH_3 PF01381.17 gi|452209831|ref|YP_007489945.1| - 0.041 13.7 1.0 1 9.2 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix DUF2072 PF09845.4 gi|452209831|ref|YP_007489945.1| - 0.061 13.2 0.1 0.061 13.2 0.1 3.0 3 0 0 3 3 3 0 Zn-ribbon containing protein (DUF2072) DUF555 PF04475.7 gi|452209831|ref|YP_007489945.1| - 0.11 12.5 1.2 1.6 8.8 0.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF555) HypA PF01155.14 gi|452209831|ref|YP_007489945.1| - 3.4 7.4 13.3 0.39 10.4 0.2 3.2 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family MarC PF01914.12 gi|452209832|ref|YP_007489946.1| - 0.0026 16.9 0.4 0.0028 16.8 0.3 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein Tic20 PF09685.5 gi|452209832|ref|YP_007489946.1| - 0.027 14.4 0.1 0.03 14.2 0.1 1.1 1 0 0 1 1 1 0 Tic20-like protein DUF4191 PF13829.1 gi|452209832|ref|YP_007489946.1| - 0.085 11.9 0.3 0.092 11.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF4212 PF13937.1 gi|452209832|ref|YP_007489946.1| - 0.096 12.6 0.3 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) Tetraspannin PF00335.15 gi|452209832|ref|YP_007489946.1| - 0.17 11.1 1.2 0.19 10.9 0.8 1.1 1 0 0 1 1 1 0 Tetraspanin family RuBisCO_large PF00016.15 gi|452209833|ref|YP_007489947.1| - 3.8e-87 292.0 0.0 4.6e-87 291.7 0.0 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.11 gi|452209833|ref|YP_007489947.1| - 2e-21 75.9 0.0 1.1e-20 73.5 0.0 2.1 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1646 PF07854.7 gi|452209834|ref|YP_007489948.1| - 9.9e-156 518.1 30.2 1.1e-155 517.9 20.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) Caveolin PF01146.12 gi|452209834|ref|YP_007489948.1| - 0.4 10.2 6.7 1.7 8.2 1.8 2.6 2 0 0 2 2 2 0 Caveolin DUF1646 PF07854.7 gi|452209835|ref|YP_007489949.1| - 2.5e-119 398.4 16.6 3e-119 398.2 11.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF2955 PF11168.3 gi|452209835|ref|YP_007489949.1| - 2.6 7.6 16.4 1.3 8.7 6.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2955) DUF1646 PF07854.7 gi|452209837|ref|YP_007489951.1| - 1.3e-160 534.2 26.6 1.5e-160 534.0 18.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) HSP20 PF00011.16 gi|452209840|ref|YP_007489954.1| - 1.2e-05 25.0 0.5 6.5e-05 22.7 0.1 1.9 1 1 1 2 2 2 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452209840|ref|YP_007489954.1| - 0.025 15.1 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 CS domain GvpH PF05455.6 gi|452209840|ref|YP_007489954.1| - 0.064 12.8 0.0 5.6 6.5 0.0 2.1 2 0 0 2 2 2 0 GvpH HSP20 PF00011.16 gi|452209841|ref|YP_007489955.1| - 2.5e-09 36.8 0.4 7.7e-07 28.9 0.3 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452209841|ref|YP_007489955.1| - 0.064 13.8 0.0 0.096 13.2 0.0 1.2 1 0 0 1 1 1 0 CS domain AAA PF00004.24 gi|452209842|ref|YP_007489956.1| - 1.9e-100 332.2 0.1 1.8e-49 167.3 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|452209842|ref|YP_007489956.1| - 2.9e-28 97.6 0.7 8.4e-27 92.9 0.7 2.8 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|452209842|ref|YP_007489956.1| - 5.3e-17 62.2 0.0 5.4e-07 29.6 0.0 3.2 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|452209842|ref|YP_007489956.1| - 5.1e-16 58.4 0.1 6.1e-08 32.0 0.0 3.1 2 2 1 3 3 3 2 Holliday junction DNA helicase ruvB N-terminus CDC48_2 PF02933.12 gi|452209842|ref|YP_007489956.1| - 6.1e-16 57.8 0.3 2.1e-15 56.1 0.2 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.1 gi|452209842|ref|YP_007489956.1| - 3e-15 56.6 0.0 5.3e-06 26.5 0.0 3.0 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|452209842|ref|YP_007489956.1| - 4.4e-13 49.5 0.2 0.0003 20.9 0.0 4.3 2 2 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|452209842|ref|YP_007489956.1| - 6e-13 48.7 1.1 4.8e-05 23.1 0.1 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|452209842|ref|YP_007489956.1| - 8.4e-13 49.2 0.1 2.4e-05 25.1 0.0 3.0 2 1 1 3 3 2 2 AAA domain AAA_14 PF13173.1 gi|452209842|ref|YP_007489956.1| - 2.2e-12 46.9 0.0 3.4e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|452209842|ref|YP_007489956.1| - 7.8e-12 45.2 0.0 2.4e-05 24.2 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.8 gi|452209842|ref|YP_007489956.1| - 7.9e-12 44.5 0.1 3.7e-05 22.6 0.0 2.4 2 0 0 2 2 2 2 TIP49 C-terminus Zeta_toxin PF06414.7 gi|452209842|ref|YP_007489956.1| - 3.2e-10 39.4 2.7 0.00021 20.4 0.0 2.9 3 0 0 3 3 2 2 Zeta toxin AAA_19 PF13245.1 gi|452209842|ref|YP_007489956.1| - 7.5e-10 38.4 0.1 0.0023 17.6 0.1 3.0 2 0 0 2 2 2 2 Part of AAA domain Sigma54_activat PF00158.21 gi|452209842|ref|YP_007489956.1| - 1.2e-08 34.6 0.1 0.0084 15.5 0.0 4.0 2 2 0 2 2 2 2 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|452209842|ref|YP_007489956.1| - 3.2e-08 33.1 0.0 0.0049 16.3 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.1 gi|452209842|ref|YP_007489956.1| - 3.4e-08 33.8 0.2 0.0086 16.3 0.0 3.4 3 0 0 3 3 2 2 AAA domain AAA_28 PF13521.1 gi|452209842|ref|YP_007489956.1| - 1.2e-07 31.8 0.4 0.01 15.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain Mg_chelatase PF01078.16 gi|452209842|ref|YP_007489956.1| - 1.5e-07 30.8 0.0 0.013 14.6 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.6 gi|452209842|ref|YP_007489956.1| - 3.1e-07 30.0 0.0 0.016 14.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.22 gi|452209842|ref|YP_007489956.1| - 4.2e-07 30.3 0.0 0.045 14.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.7 gi|452209842|ref|YP_007489956.1| - 6e-07 29.2 0.2 0.31 10.6 0.0 4.1 3 1 1 4 4 4 2 NACHT domain Sigma54_activ_2 PF14532.1 gi|452209842|ref|YP_007489956.1| - 2.1e-06 27.8 0.0 0.081 12.9 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|452209842|ref|YP_007489956.1| - 3.4e-06 27.1 0.0 0.076 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase DUF815 PF05673.8 gi|452209842|ref|YP_007489956.1| - 6.5e-06 25.2 0.0 0.067 12.1 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.1 gi|452209842|ref|YP_007489956.1| - 2.3e-05 23.9 6.6 0.61 9.4 0.1 4.1 2 2 1 3 3 3 2 AAA domain PhoH PF02562.11 gi|452209842|ref|YP_007489956.1| - 2.5e-05 23.6 0.1 0.15 11.3 0.0 2.6 2 0 0 2 2 2 2 PhoH-like protein Arch_ATPase PF01637.13 gi|452209842|ref|YP_007489956.1| - 2.6e-05 24.0 4.7 0.14 11.7 0.0 3.8 3 2 1 4 4 4 2 Archaeal ATPase ATP-synt_ab PF00006.20 gi|452209842|ref|YP_007489956.1| - 2.7e-05 23.7 0.0 0.096 12.1 0.0 2.4 2 1 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain AAA_11 PF13086.1 gi|452209842|ref|YP_007489956.1| - 5.6e-05 22.8 1.1 0.16 11.5 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.1 gi|452209842|ref|YP_007489956.1| - 7.8e-05 22.3 0.0 0.64 9.5 0.0 2.8 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.5 gi|452209842|ref|YP_007489956.1| - 0.00011 22.0 0.6 0.046 13.6 0.0 3.6 3 0 0 3 3 3 1 Vps4 C terminal oligomerisation domain AAA_24 PF13479.1 gi|452209842|ref|YP_007489956.1| - 0.00012 21.7 0.1 0.28 10.7 0.0 2.9 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|452209842|ref|YP_007489956.1| - 0.00012 21.0 0.0 0.33 9.7 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain Parvo_NS1 PF01057.12 gi|452209842|ref|YP_007489956.1| - 0.00032 19.6 0.0 0.75 8.6 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.4 gi|452209842|ref|YP_007489956.1| - 0.00035 19.6 0.0 0.44 9.4 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.10 gi|452209842|ref|YP_007489956.1| - 0.00051 19.7 6.2 1.8 8.2 0.0 4.8 3 2 1 4 4 4 2 NTPase UPF0079 PF02367.12 gi|452209842|ref|YP_007489956.1| - 0.00062 19.3 0.2 1.1 8.9 0.0 2.9 2 1 1 3 3 3 1 Uncharacterised P-loop hydrolase UPF0079 ResIII PF04851.10 gi|452209842|ref|YP_007489956.1| - 0.0013 18.5 0.4 0.48 10.2 0.0 3.1 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit AFG1_ATPase PF03969.11 gi|452209842|ref|YP_007489956.1| - 0.0015 17.4 0.0 0.6 8.8 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase Guanylate_kin PF00625.16 gi|452209842|ref|YP_007489956.1| - 0.0018 17.7 0.5 3.9 6.8 0.0 4.3 4 1 1 5 5 3 0 Guanylate kinase KaiC PF06745.8 gi|452209842|ref|YP_007489956.1| - 0.0021 17.2 6.8 1.6 7.7 0.0 4.4 3 2 1 5 5 5 1 KaiC Bac_DnaA PF00308.13 gi|452209842|ref|YP_007489956.1| - 0.0032 17.1 0.0 2.2 7.8 0.0 2.8 2 1 0 2 2 2 1 Bacterial dnaA protein SKI PF01202.17 gi|452209842|ref|YP_007489956.1| - 0.0033 17.3 3.7 1.4 8.7 0.0 3.3 3 0 0 3 3 3 1 Shikimate kinase Viral_helicase1 PF01443.13 gi|452209842|ref|YP_007489956.1| - 0.0038 16.7 0.0 1.5 8.3 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Cytidylate_kin2 PF13189.1 gi|452209842|ref|YP_007489956.1| - 0.0051 16.7 3.2 0.53 10.1 0.0 3.3 3 0 0 3 3 3 1 Cytidylate kinase-like family CPT PF07931.7 gi|452209842|ref|YP_007489956.1| - 0.0074 15.9 0.0 1.1 8.8 0.0 2.9 3 0 0 3 3 3 1 Chloramphenicol phosphotransferase-like protein T2SE PF00437.15 gi|452209842|ref|YP_007489956.1| - 0.013 14.4 0.0 3.8 6.3 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF1677 PF07911.8 gi|452209842|ref|YP_007489956.1| - 0.018 15.2 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1677) KAP_NTPase PF07693.9 gi|452209842|ref|YP_007489956.1| - 0.019 13.9 0.0 3.5 6.5 0.0 2.7 2 1 0 3 3 3 0 KAP family P-loop domain KTI12 PF08433.5 gi|452209842|ref|YP_007489956.1| - 0.033 13.3 0.0 8.4 5.5 0.0 2.5 2 0 0 2 2 2 0 Chromatin associated protein KTI12 IPT PF01745.11 gi|452209842|ref|YP_007489956.1| - 0.044 12.9 0.1 9.3 5.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase GIDA_assoc_3 PF13932.1 gi|452209842|ref|YP_007489956.1| - 0.053 13.5 0.2 0.65 10.0 0.0 2.9 2 0 0 2 2 1 0 GidA associated domain 3 Torsin PF06309.6 gi|452209842|ref|YP_007489956.1| - 0.068 13.0 0.0 4.4 7.2 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_23 PF13476.1 gi|452209842|ref|YP_007489956.1| - 1.8 8.8 10.3 6.9 6.9 0.0 3.9 4 1 0 4 4 3 0 AAA domain HTH_5 PF01022.15 gi|452209843|ref|YP_007489957.1| - 4.7e-16 58.1 0.2 8.9e-12 44.4 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452209843|ref|YP_007489957.1| - 1.9e-12 46.7 0.1 1.2e-09 37.8 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.2 gi|452209843|ref|YP_007489957.1| - 1.9e-09 37.0 0.0 0.0017 17.9 0.0 2.4 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 gi|452209843|ref|YP_007489957.1| - 9.5e-06 25.2 0.0 0.017 14.8 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|452209843|ref|YP_007489957.1| - 1.6e-05 24.8 0.0 0.027 14.4 0.0 2.6 2 0 0 2 2 2 2 Winged helix DNA-binding domain LexA_DNA_bind PF01726.11 gi|452209843|ref|YP_007489957.1| - 0.00046 19.6 0.0 0.17 11.4 0.0 2.6 2 0 0 2 2 2 1 LexA DNA binding domain HTH_Crp_2 PF13545.1 gi|452209843|ref|YP_007489957.1| - 0.00073 19.2 1.1 0.22 11.3 0.0 3.1 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|452209843|ref|YP_007489957.1| - 0.00084 18.6 1.6 0.012 14.9 0.1 3.0 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|452209843|ref|YP_007489957.1| - 0.00091 19.5 0.0 0.065 13.5 0.0 2.6 3 0 0 3 3 2 1 Winged helix DNA-binding domain MarR PF01047.17 gi|452209843|ref|YP_007489957.1| - 0.0055 16.3 0.0 0.072 12.8 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.7 gi|452209843|ref|YP_007489957.1| - 0.0059 16.2 0.4 0.018 14.7 0.0 2.0 2 0 0 2 2 2 1 HTH domain HTH_36 PF13730.1 gi|452209843|ref|YP_007489957.1| - 0.019 15.1 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.9 gi|452209843|ref|YP_007489957.1| - 0.025 14.3 0.0 3.2 7.5 0.0 3.1 3 1 0 3 3 3 0 Transcriptional regulator PadR-like family DUF742 PF05331.6 gi|452209843|ref|YP_007489957.1| - 0.027 14.0 0.0 2 8.0 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_45 PF14947.1 gi|452209843|ref|YP_007489957.1| - 0.029 14.1 0.0 0.52 10.1 0.0 2.6 2 1 1 3 3 3 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|452209843|ref|YP_007489957.1| - 0.06 13.4 0.1 0.51 10.4 0.0 2.3 3 0 0 3 3 3 0 Transcriptional regulator DUF2513 PF10711.4 gi|452209843|ref|YP_007489957.1| - 0.11 12.5 0.2 0.79 9.8 0.0 2.3 3 0 0 3 3 3 0 Hypothetical protein (DUF2513) PPPI_inhib PF14895.1 gi|452209844|ref|YP_007489958.1| - 0.13 11.0 0.3 0.13 10.9 0.2 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 inhibitor Pep_M12B_propep PF01562.14 gi|452209845|ref|YP_007489959.1| - 0.00055 19.7 0.1 0.0013 18.5 0.0 1.6 1 1 1 2 2 2 1 Reprolysin family propeptide CBM_4_9 PF02018.12 gi|452209845|ref|YP_007489959.1| - 0.03 14.3 0.5 0.054 13.5 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain DDE_Tnp_IS66 PF03050.9 gi|452209847|ref|YP_007489961.1| - 7.7e-11 41.7 0.0 8.1e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family DUF2072 PF09845.4 gi|452209848|ref|YP_007489962.1| - 3.2e-48 162.9 0.1 3.9e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein (DUF2072) AnfO_nitrog PF09582.5 gi|452209848|ref|YP_007489962.1| - 0.0073 15.4 0.5 0.013 14.6 0.2 1.5 1 1 1 2 2 2 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) zf-ribbon_3 PF13248.1 gi|452209848|ref|YP_007489962.1| - 0.016 14.3 1.3 2 7.7 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|452209848|ref|YP_007489962.1| - 0.018 14.4 1.0 0.034 13.6 0.7 1.5 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|452209848|ref|YP_007489962.1| - 0.11 11.8 1.3 1.3 8.4 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.5 gi|452209848|ref|YP_007489962.1| - 0.85 9.6 3.1 5.8 6.9 2.1 2.2 1 1 0 1 1 1 0 Zinc ribbon domain UPF0547 PF10571.4 gi|452209848|ref|YP_007489962.1| - 4.2 7.1 5.3 9.9 5.9 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Pribosyltran PF00156.22 gi|452209849|ref|YP_007489963.1| - 9.3e-22 77.0 0.0 1.6e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|452209849|ref|YP_007489963.1| - 0.052 12.7 0.0 0.077 12.1 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF4413 PF14372.1 gi|452209849|ref|YP_007489963.1| - 0.13 12.2 0.2 0.33 10.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) DUF1724 PF08350.5 gi|452209850|ref|YP_007489964.1| - 1.5e-23 82.1 0.5 5.7e-22 77.0 0.1 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|452209850|ref|YP_007489964.1| - 0.0013 18.9 0.1 0.0032 17.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|452209850|ref|YP_007489964.1| - 0.02 14.5 0.1 0.054 13.1 0.1 1.7 1 0 0 1 1 1 0 HTH domain HTH_45 PF14947.1 gi|452209850|ref|YP_007489964.1| - 0.03 14.1 0.4 0.068 12.9 0.3 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix YopJ PF03421.11 gi|452209850|ref|YP_007489964.1| - 0.069 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 YopJ Serine/Threonine acetyltransferase HTH_20 PF12840.2 gi|452209850|ref|YP_007489964.1| - 0.08 12.7 0.0 0.22 11.3 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|452209850|ref|YP_007489964.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain zf-FCS PF06467.9 gi|452209851|ref|YP_007489965.1| - 0.003 17.1 2.4 0.003 17.1 1.7 1.8 2 0 0 2 2 2 1 MYM-type Zinc finger with FCS sequence motif DNA_ligase_IV PF11411.3 gi|452209851|ref|YP_007489965.1| - 0.15 11.8 0.1 0.39 10.4 0.0 1.6 2 0 0 2 2 2 0 DNA ligase IV zf-C4_ClpX PF06689.8 gi|452209851|ref|YP_007489965.1| - 0.2 11.2 0.2 0.2 11.2 0.2 2.3 2 0 0 2 2 2 0 ClpX C4-type zinc finger DUF3795 PF12675.2 gi|452209851|ref|YP_007489965.1| - 1.6 8.9 8.7 2.3 8.4 6.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) Fer4_10 PF13237.1 gi|452209851|ref|YP_007489965.1| - 5.6 6.8 9.4 32 4.4 6.5 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain SRP54 PF00448.17 gi|452209852|ref|YP_007489966.1| - 1.4e-71 240.0 0.4 2.2e-71 239.3 0.3 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|452209852|ref|YP_007489966.1| - 6.2e-32 109.9 5.7 2.9e-31 107.8 2.2 2.7 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.14 gi|452209852|ref|YP_007489966.1| - 6e-21 74.3 0.3 4.7e-17 61.8 0.0 2.8 2 0 0 2 2 2 2 SRP54-type protein, helical bundle domain CbiA PF01656.18 gi|452209852|ref|YP_007489966.1| - 2.7e-05 23.6 1.1 0.00011 21.7 0.6 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.1 gi|452209852|ref|YP_007489966.1| - 0.00022 21.1 0.0 0.00048 20.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.15 gi|452209852|ref|YP_007489966.1| - 0.00023 20.8 0.0 0.00078 19.1 0.0 1.9 1 0 0 1 1 1 1 Adenylylsulphate kinase 6PF2K PF01591.13 gi|452209852|ref|YP_007489966.1| - 0.00047 19.2 0.0 0.001 18.2 0.0 1.5 1 0 0 1 1 1 1 6-phosphofructo-2-kinase Zeta_toxin PF06414.7 gi|452209852|ref|YP_007489966.1| - 0.00058 19.0 0.1 0.0012 17.9 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin MobB PF03205.9 gi|452209852|ref|YP_007489966.1| - 0.00061 19.5 0.1 0.0014 18.3 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.14 gi|452209852|ref|YP_007489966.1| - 0.0012 18.3 0.5 0.0086 15.5 0.3 2.3 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_31 PF13614.1 gi|452209852|ref|YP_007489966.1| - 0.0025 17.7 0.0 0.7 9.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452209852|ref|YP_007489966.1| - 0.0031 17.6 0.1 0.014 15.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|452209852|ref|YP_007489966.1| - 0.0035 17.0 0.1 0.042 13.6 0.0 2.3 2 0 0 2 2 2 1 Part of AAA domain KTI12 PF08433.5 gi|452209852|ref|YP_007489966.1| - 0.0044 16.2 0.0 0.0086 15.3 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ArgK PF03308.11 gi|452209852|ref|YP_007489966.1| - 0.0048 15.6 0.0 0.017 13.9 0.0 1.8 2 0 0 2 2 2 1 ArgK protein AAA_17 PF13207.1 gi|452209852|ref|YP_007489966.1| - 0.0067 17.2 0.1 0.018 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.12 gi|452209852|ref|YP_007489966.1| - 0.0086 15.4 0.2 0.032 13.6 0.1 2.0 2 0 0 2 2 2 1 Thymidylate kinase AAA_16 PF13191.1 gi|452209852|ref|YP_007489966.1| - 0.0089 16.0 0.0 0.018 14.9 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain DUF1611 PF07755.6 gi|452209852|ref|YP_007489966.1| - 0.02 13.5 0.3 0.033 12.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1611) ATP_bind_1 PF03029.12 gi|452209852|ref|YP_007489966.1| - 0.043 13.3 0.3 0.28 10.6 0.0 2.3 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein TrwB_AAD_bind PF10412.4 gi|452209852|ref|YP_007489966.1| - 0.073 11.6 0.1 0.13 10.8 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.7 gi|452209852|ref|YP_007489966.1| - 0.11 12.1 0.1 0.2 11.2 0.1 1.4 1 0 0 1 1 1 0 NACHT domain Spectrin PF00435.16 gi|452209852|ref|YP_007489966.1| - 0.13 12.5 0.7 14 6.0 0.0 2.9 3 0 0 3 3 2 0 Spectrin repeat NB-ARC PF00931.17 gi|452209852|ref|YP_007489966.1| - 0.15 10.9 1.6 3 6.6 0.1 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.9 gi|452209852|ref|YP_007489966.1| - 0.18 11.5 1.5 1.5 8.5 0.1 2.8 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.1 gi|452209852|ref|YP_007489966.1| - 0.21 11.5 0.6 0.94 9.4 0.2 2.2 1 1 1 2 2 2 0 AAA domain DUF4046 PF13255.1 gi|452209853|ref|YP_007489967.1| - 0.022 13.5 1.9 0.03 13.0 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) DUF3552 PF12072.3 gi|452209853|ref|YP_007489967.1| - 0.099 11.8 1.0 0.14 11.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) GATase PF00117.23 gi|452209854|ref|YP_007489968.1| - 1.2e-40 139.0 0.0 1.3e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|452209854|ref|YP_007489968.1| - 5.3e-13 48.9 0.3 9.4e-12 44.8 0.1 2.4 2 1 0 2 2 2 1 Peptidase C26 DeoC PF01791.4 gi|452209855|ref|YP_007489969.1| - 7.1e-59 198.9 0.0 8.2e-59 198.7 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 gi|452209855|ref|YP_007489969.1| - 0.082 12.1 0.4 2.5 7.2 0.0 2.8 1 1 2 3 3 3 0 Phosphoenolpyruvate phosphomutase OMPdecase PF00215.19 gi|452209855|ref|YP_007489969.1| - 0.084 12.2 0.1 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHQS PF01959.11 gi|452209856|ref|YP_007489970.1| - 5.7e-154 512.0 1.8 6.5e-154 511.8 1.2 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) Peripla_BP_4 PF13407.1 gi|452209856|ref|YP_007489970.1| - 0.0047 16.3 0.7 2.4 7.4 0.0 3.0 3 0 0 3 3 3 2 Periplasmic binding protein domain DUF2577 PF10844.3 gi|452209856|ref|YP_007489970.1| - 0.0064 16.5 0.0 9.5 6.3 0.0 3.0 3 0 0 3 3 3 2 Protein of unknown function (DUF2577) QRPTase_C PF01729.14 gi|452209856|ref|YP_007489970.1| - 0.015 14.8 0.2 0.041 13.4 0.1 1.7 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Response_reg PF00072.19 gi|452209856|ref|YP_007489970.1| - 0.057 13.4 0.0 0.52 10.3 0.0 2.2 2 0 0 2 2 2 0 Response regulator receiver domain UPF0086 PF01868.11 gi|452209856|ref|YP_007489970.1| - 0.065 12.8 0.1 0.2 11.2 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function UPF0086 DHquinase_I PF01487.10 gi|452209857|ref|YP_007489971.1| - 5.7e-60 202.7 0.0 6.9e-60 202.4 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.14 gi|452209857|ref|YP_007489971.1| - 0.0058 16.3 0.1 1.6 8.2 0.0 2.3 2 0 0 2 2 2 2 HMGL-like Shikimate_dh_N PF08501.6 gi|452209858|ref|YP_007489972.1| - 7.7e-25 86.7 0.0 1.6e-24 85.7 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|452209858|ref|YP_007489972.1| - 8.2e-15 55.0 0.1 1.2e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|452209858|ref|YP_007489972.1| - 0.0003 20.0 0.2 0.0014 17.8 0.1 2.1 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|452209858|ref|YP_007489972.1| - 0.00073 19.5 0.5 0.0013 18.7 0.4 1.5 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_7 PF13241.1 gi|452209858|ref|YP_007489972.1| - 0.005 17.0 0.1 0.0077 16.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|452209858|ref|YP_007489972.1| - 0.0099 15.8 0.4 0.019 14.9 0.3 1.5 1 1 0 1 1 1 1 TrkA-N domain ApbA PF02558.11 gi|452209858|ref|YP_007489972.1| - 0.02 14.3 0.4 0.042 13.3 0.2 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Saccharop_dh PF03435.13 gi|452209858|ref|YP_007489972.1| - 0.027 13.4 0.2 0.037 13.0 0.2 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Ldh_1_N PF00056.18 gi|452209858|ref|YP_007489972.1| - 0.029 14.2 0.1 0.054 13.3 0.1 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PDH PF02153.12 gi|452209859|ref|YP_007489973.1| - 1.9e-52 177.7 0.0 2.4e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.10 gi|452209859|ref|YP_007489973.1| - 4.8e-09 36.2 0.0 8.8e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|452209859|ref|YP_007489973.1| - 7.8e-07 28.4 0.1 2.3e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|452209859|ref|YP_007489973.1| - 1.1e-06 28.9 0.0 3.4e-06 27.3 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|452209859|ref|YP_007489973.1| - 0.0013 18.4 1.3 0.047 13.4 0.9 2.6 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|452209859|ref|YP_007489973.1| - 0.0067 15.8 0.1 0.023 14.1 0.0 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Epimerase PF01370.16 gi|452209859|ref|YP_007489973.1| - 0.0097 15.3 0.0 0.015 14.7 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.8 gi|452209859|ref|YP_007489973.1| - 0.022 14.0 0.0 0.054 12.7 0.0 1.7 2 0 0 2 2 2 0 NmrA-like family FDX-ACB PF03147.9 gi|452209859|ref|YP_007489973.1| - 0.037 14.1 0.0 0.075 13.2 0.0 1.5 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain CoA_binding PF02629.14 gi|452209859|ref|YP_007489973.1| - 0.038 14.5 0.5 0.12 12.8 0.1 2.1 3 0 0 3 3 1 0 CoA binding domain NAD_binding_10 PF13460.1 gi|452209859|ref|YP_007489973.1| - 0.074 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 NADH(P)-binding 3HCDH_N PF02737.13 gi|452209859|ref|YP_007489973.1| - 0.079 12.6 0.1 11 5.6 0.0 2.3 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HEAT_2 PF13646.1 gi|452209860|ref|YP_007489974.1| - 2.5e-50 168.6 7.6 3.1e-13 49.7 0.1 6.6 2 2 3 5 5 5 5 HEAT repeats HEAT_PBS PF03130.11 gi|452209860|ref|YP_007489974.1| - 6.3e-39 128.4 1.0 0.0009 19.4 0.0 10.8 10 0 0 10 10 10 7 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|452209860|ref|YP_007489974.1| - 3.7e-11 43.1 8.3 0.0013 19.1 0.1 7.5 4 3 4 8 8 8 4 HEAT-like repeat HEAT PF02985.17 gi|452209860|ref|YP_007489974.1| - 8e-11 41.0 0.0 0.39 10.9 0.0 6.7 8 0 0 8 8 8 3 HEAT repeat Vitellogenin_N PF01347.17 gi|452209860|ref|YP_007489974.1| - 3e-06 25.7 0.0 0.0071 14.6 0.0 2.5 1 1 1 2 2 2 2 Lipoprotein amino terminal region Cnd1 PF12717.2 gi|452209860|ref|YP_007489974.1| - 0.024 14.4 0.2 1.6 8.5 0.0 3.7 4 1 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 Arm PF00514.18 gi|452209860|ref|YP_007489974.1| - 0.028 14.2 0.1 65 3.5 0.0 4.8 4 0 0 4 4 4 0 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|452209860|ref|YP_007489974.1| - 0.067 11.4 0.1 0.8 7.9 0.0 2.3 1 1 1 2 2 2 0 Adaptin N terminal region Nipped-B_C PF12830.2 gi|452209860|ref|YP_007489974.1| - 0.091 12.3 0.1 0.19 11.3 0.1 1.5 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus A2M_comp PF07678.9 gi|452209860|ref|YP_007489974.1| - 0.1 11.8 0.5 0.54 9.4 0.0 2.2 2 1 0 2 2 2 0 A-macroglobulin complement component Methyltransf_11 PF08241.7 gi|452209861|ref|YP_007489975.1| - 8.8e-25 87.0 0.0 1.4e-24 86.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209861|ref|YP_007489975.1| - 1.5e-22 79.8 0.0 1.9e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452209861|ref|YP_007489975.1| - 2.4e-16 59.5 0.0 5e-16 58.5 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|452209861|ref|YP_007489975.1| - 3.8e-16 59.2 0.0 4.9e-16 58.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452209861|ref|YP_007489975.1| - 1.8e-15 57.1 0.0 2.9e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209861|ref|YP_007489975.1| - 2.3e-15 57.1 0.0 4.2e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452209861|ref|YP_007489975.1| - 2e-13 50.6 0.0 3.3e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452209861|ref|YP_007489975.1| - 8.8e-11 41.8 0.0 1.9e-10 40.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452209861|ref|YP_007489975.1| - 1.7e-08 34.0 0.0 2.8e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.6 gi|452209861|ref|YP_007489975.1| - 7.9e-06 25.3 0.0 1.5e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Nodulation protein S (NodS) RrnaAD PF00398.15 gi|452209861|ref|YP_007489975.1| - 2.2e-05 23.6 0.0 3.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.8 gi|452209861|ref|YP_007489975.1| - 0.00011 21.4 0.0 0.00015 20.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.7 gi|452209861|ref|YP_007489975.1| - 0.00041 19.3 0.0 0.00061 18.7 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase TehB PF03848.9 gi|452209861|ref|YP_007489975.1| - 0.0014 17.8 0.0 0.0025 16.9 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.14 gi|452209861|ref|YP_007489975.1| - 0.004 16.7 0.0 0.011 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.7 gi|452209861|ref|YP_007489975.1| - 0.0041 16.5 0.0 0.017 14.4 0.0 1.8 1 1 1 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.1 gi|452209861|ref|YP_007489975.1| - 0.0099 15.5 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|452209861|ref|YP_007489975.1| - 0.012 14.7 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_9 PF08003.6 gi|452209861|ref|YP_007489975.1| - 0.012 14.3 0.0 0.016 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) UPF0020 PF01170.13 gi|452209861|ref|YP_007489975.1| - 0.014 15.0 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.5 gi|452209861|ref|YP_007489975.1| - 0.017 14.6 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase 3HCDH_N PF02737.13 gi|452209861|ref|YP_007489975.1| - 0.14 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TIM PF00121.13 gi|452209862|ref|YP_007489976.1| - 1.8e-29 102.5 0.1 5.4e-20 71.4 0.0 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase ThiG PF05690.9 gi|452209862|ref|YP_007489976.1| - 0.00013 21.1 0.2 0.00031 19.8 0.2 1.6 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|452209862|ref|YP_007489976.1| - 0.0029 16.8 1.3 0.0042 16.2 0.4 1.5 1 1 1 2 2 2 1 Nitronate monooxygenase FMN_dh PF01070.13 gi|452209862|ref|YP_007489976.1| - 0.0047 15.8 0.8 0.036 12.9 0.2 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase Hydrolase_like PF13242.1 gi|452209862|ref|YP_007489976.1| - 0.0058 16.3 0.1 3.7 7.3 0.0 2.3 2 0 0 2 2 2 2 HAD-hyrolase-like IGPS PF00218.16 gi|452209862|ref|YP_007489976.1| - 0.01 14.9 0.0 0.025 13.6 0.0 1.7 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase His_biosynth PF00977.16 gi|452209862|ref|YP_007489976.1| - 0.022 14.0 0.1 0.14 11.4 0.0 2.0 2 0 0 2 2 2 0 Histidine biosynthesis protein Fae PF08714.6 gi|452209863|ref|YP_007489977.1| - 7.5e-73 243.5 0.1 1.6e-72 242.4 0.1 1.6 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.19 gi|452209863|ref|YP_007489977.1| - 1.7e-21 76.6 3.1 1.3e-20 73.7 2.1 2.1 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.14 gi|452209863|ref|YP_007489977.1| - 4.6e-05 22.6 1.3 0.00018 20.6 0.9 2.1 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Cas_csx3 PF09620.5 gi|452209863|ref|YP_007489977.1| - 0.0016 18.1 0.1 1.5 8.6 0.0 2.6 1 1 1 2 2 2 2 CRISPR-associated protein (Cas_csx3) PcrB PF01884.12 gi|452209863|ref|YP_007489977.1| - 0.0026 17.0 1.8 0.0043 16.3 0.2 1.9 2 0 0 2 2 2 1 PcrB family QRPTase_C PF01729.14 gi|452209863|ref|YP_007489977.1| - 0.0061 16.1 0.2 0.012 15.1 0.1 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain HhH-GPD PF00730.20 gi|452209864|ref|YP_007489978.1| - 5.5e-24 84.5 0.0 7.4e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|452209864|ref|YP_007489978.1| - 3.2e-10 39.1 0.2 3.9e-09 35.7 0.0 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|452209864|ref|YP_007489978.1| - 0.00015 21.8 0.2 0.00073 19.6 0.2 2.0 1 1 0 1 1 1 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.4 gi|452209864|ref|YP_007489978.1| - 0.0002 21.4 3.0 0.0002 21.4 2.1 1.8 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_2 PF12826.2 gi|452209864|ref|YP_007489978.1| - 0.00091 19.0 0.0 0.33 10.8 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif DUF2400 PF09674.5 gi|452209864|ref|YP_007489978.1| - 0.029 14.0 0.0 0.27 10.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Yip1 PF04893.12 gi|452209865|ref|YP_007489979.1| - 2.3e-24 85.7 19.3 2.3e-24 85.7 13.4 1.3 1 1 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|452209865|ref|YP_007489979.1| - 0.0083 15.7 18.7 0.031 13.9 12.6 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) Sdh5 PF03937.11 gi|452209866|ref|YP_007489980.1| - 0.035 13.8 0.0 0.2 11.3 0.0 1.9 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase Ferritin PF00210.19 gi|452209867|ref|YP_007489981.1| - 1.1e-33 116.0 2.8 1.2e-33 115.8 1.9 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 gi|452209867|ref|YP_007489981.1| - 2.4e-05 24.7 3.0 3.3e-05 24.2 2.0 1.3 1 0 0 1 1 1 1 Rubrerythrin DUF892 PF05974.7 gi|452209867|ref|YP_007489981.1| - 0.00019 21.2 0.7 0.00033 20.4 0.0 1.7 2 1 0 2 2 2 1 Domain of unknown function (DUF892) Phenol_Hydrox PF02332.13 gi|452209867|ref|YP_007489981.1| - 0.012 14.8 0.1 0.036 13.3 0.0 1.7 2 0 0 2 2 2 0 Methane/Phenol/Toluene Hydroxylase Hypoth_Ymh PF09509.5 gi|452209867|ref|YP_007489981.1| - 0.031 13.8 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) HMGL-like PF00682.14 gi|452209868|ref|YP_007489982.1| - 1.2e-77 260.7 0.9 2.2e-77 259.9 0.6 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|452209868|ref|YP_007489982.1| - 1.1e-32 112.5 1.5 3.1e-32 111.1 1.0 1.8 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TatD_DNase PF01026.16 gi|452209869|ref|YP_007489983.1| - 5.9e-55 186.2 0.0 7e-55 185.9 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.9 gi|452209869|ref|YP_007489983.1| - 0.014 14.9 0.0 0.028 13.9 0.0 1.6 1 1 0 1 1 1 0 Amidohydrolase AP_endonuc_2 PF01261.19 gi|452209869|ref|YP_007489983.1| - 0.044 13.0 0.3 0.1 11.9 0.1 1.7 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel UxaC PF02614.9 gi|452209869|ref|YP_007489983.1| - 0.19 10.2 0.3 0.58 8.7 0.1 1.7 2 0 0 2 2 2 0 Glucuronate isomerase Lactamase_B PF00753.22 gi|452209870|ref|YP_007489984.1| - 8.6e-27 94.0 0.3 9.8e-27 93.8 0.2 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452209870|ref|YP_007489984.1| - 1.5e-05 24.6 0.0 2.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Radical_SAM_N PF08497.5 gi|452209871|ref|YP_007489985.1| - 4.4e-133 442.8 0.0 6e-133 442.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal Radical_SAM PF04055.16 gi|452209871|ref|YP_007489985.1| - 5.6e-19 68.9 1.3 9e-18 64.9 0.2 2.7 3 0 0 3 3 3 1 Radical SAM superfamily DUF3362 PF11842.3 gi|452209871|ref|YP_007489985.1| - 2.7e-15 56.5 0.1 2.7e-15 56.5 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3362) B12-binding PF02310.14 gi|452209871|ref|YP_007489985.1| - 0.00032 20.5 0.0 0.51 10.2 0.0 3.6 4 1 0 4 4 4 2 B12 binding domain Serglycin PF04360.7 gi|452209873|ref|YP_007489987.1| - 0.13 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Serglycin CCG PF02754.11 gi|452209874|ref|YP_007489988.1| - 1.5e-35 121.0 1.2 1.4e-16 60.2 0.1 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|452209874|ref|YP_007489988.1| - 1.4e-11 44.2 4.7 1.4e-11 44.2 3.2 2.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209874|ref|YP_007489988.1| - 1.1e-10 41.6 3.2 1.1e-10 41.6 2.2 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452209874|ref|YP_007489988.1| - 3.4e-07 29.9 6.2 3.4e-07 29.9 4.3 2.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209874|ref|YP_007489988.1| - 8.2e-07 29.6 10.1 0.0024 18.5 0.5 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|452209874|ref|YP_007489988.1| - 1.3e-05 25.4 10.1 1.3e-05 25.4 7.0 2.7 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209874|ref|YP_007489988.1| - 3.4e-05 24.0 18.0 0.0013 18.9 0.7 3.8 4 1 1 5 5 5 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452209874|ref|YP_007489988.1| - 0.00032 21.0 16.4 0.0027 18.0 1.1 3.9 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452209874|ref|YP_007489988.1| - 0.00036 20.2 2.0 0.00036 20.2 1.4 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4 PF00037.22 gi|452209874|ref|YP_007489988.1| - 0.0014 18.1 25.7 0.0024 17.4 2.6 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain UPF0004 PF00919.15 gi|452209874|ref|YP_007489988.1| - 0.0018 18.1 0.0 1.6 8.6 0.0 3.3 2 1 1 3 3 3 1 Uncharacterized protein family UPF0004 Fer4_21 PF14697.1 gi|452209874|ref|YP_007489988.1| - 0.0021 17.8 14.7 0.0097 15.7 0.5 3.7 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452209874|ref|YP_007489988.1| - 0.021 15.1 3.2 0.021 15.1 2.2 3.9 4 0 0 4 4 3 0 4Fe-4S binding domain Eapp_C PF10238.4 gi|452209874|ref|YP_007489988.1| - 0.27 11.1 4.0 1 9.2 1.8 2.4 2 0 0 2 2 2 0 E2F-associated phosphoprotein Fer4_15 PF13459.1 gi|452209874|ref|YP_007489988.1| - 0.5 10.9 9.7 5.4 7.6 0.1 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_6 PF12837.2 gi|452209874|ref|YP_007489988.1| - 2.7 8.0 27.6 0.14 12.0 2.2 3.4 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452209874|ref|YP_007489988.1| - 3.7 8.0 15.6 0.3 11.5 0.4 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain FAD-oxidase_C PF02913.14 gi|452209875|ref|YP_007489989.1| - 2.9e-56 190.5 0.0 3.7e-56 190.2 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.18 gi|452209875|ref|YP_007489989.1| - 8.3e-47 158.1 0.1 1.5e-46 157.3 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain TGT PF01702.13 gi|452209877|ref|YP_007489991.1| - 1.6e-24 86.5 0.0 4.9e-24 84.9 0.0 1.7 2 0 0 2 2 2 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.1 gi|452209877|ref|YP_007489991.1| - 3.1e-14 52.5 0.0 7.6e-14 51.3 0.0 1.6 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|452209877|ref|YP_007489991.1| - 3.7e-14 52.2 0.3 7.5e-14 51.2 0.2 1.5 1 0 0 1 1 1 1 PUA domain Acetyltransf_1 PF00583.19 gi|452209878|ref|YP_007489992.1| - 6.7e-20 70.9 0.7 1e-19 70.2 0.5 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|452209878|ref|YP_007489992.1| - 1.3e-12 47.8 0.0 1.9e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|452209878|ref|YP_007489992.1| - 3.5e-12 46.2 0.4 6.7e-12 45.4 0.3 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452209878|ref|YP_007489992.1| - 2e-09 37.5 0.2 3.7e-09 36.7 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452209878|ref|YP_007489992.1| - 2.3e-09 36.8 0.1 3.7e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|452209878|ref|YP_007489992.1| - 9.9e-09 35.1 0.1 2.9e-08 33.6 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452209878|ref|YP_007489992.1| - 1.3e-08 35.1 0.2 2.9e-08 33.9 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452209878|ref|YP_007489992.1| - 5.9e-07 29.4 0.0 1.6e-06 28.1 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452209878|ref|YP_007489992.1| - 4.9e-05 23.1 0.1 9e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF1999 PF09390.5 gi|452209878|ref|YP_007489992.1| - 0.02 14.2 0.0 0.029 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) Acetyltransf_6 PF13480.1 gi|452209878|ref|YP_007489992.1| - 0.05 13.5 0.1 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Toprim_4 PF13662.1 gi|452209880|ref|YP_007489994.1| - 1.4e-08 34.5 0.2 4.6e-08 32.9 0.1 1.9 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|452209880|ref|YP_007489994.1| - 0.0089 15.9 0.1 0.045 13.7 0.0 2.2 1 1 0 1 1 1 1 Toprim domain DUF3484 PF11983.3 gi|452209880|ref|YP_007489994.1| - 0.51 11.2 3.0 1.6 9.6 0.0 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3484) Pyr_redox_2 PF07992.9 gi|452209882|ref|YP_007489996.1| - 9.5e-26 90.9 0.4 5.2e-15 55.8 0.0 4.0 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|452209882|ref|YP_007489996.1| - 9e-23 80.4 9.2 1.5e-18 66.9 0.1 3.7 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|452209882|ref|YP_007489996.1| - 1.4e-14 53.8 3.2 2.6e-05 23.3 0.6 4.1 4 0 0 4 4 4 4 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|452209882|ref|YP_007489996.1| - 5e-10 39.7 0.0 7.1e-06 26.2 0.0 2.7 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|452209882|ref|YP_007489996.1| - 8.4e-09 34.3 0.1 0.057 11.8 0.0 3.5 4 0 0 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.1 gi|452209882|ref|YP_007489996.1| - 2.6e-08 33.7 0.3 0.0026 17.7 0.0 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|452209882|ref|YP_007489996.1| - 7.2e-08 31.6 1.0 0.00012 21.1 0.2 3.3 3 1 1 4 4 4 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|452209882|ref|YP_007489996.1| - 1e-07 31.2 0.2 0.0042 15.9 0.0 2.7 3 0 0 3 3 3 2 FAD binding domain FAD_binding_3 PF01494.14 gi|452209882|ref|YP_007489996.1| - 1.4e-06 27.6 0.5 0.00061 18.9 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_7 PF13241.1 gi|452209882|ref|YP_007489996.1| - 8.1e-06 26.0 0.2 0.04 14.1 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding K_oxygenase PF13434.1 gi|452209882|ref|YP_007489996.1| - 8.3e-05 21.6 0.0 0.0038 16.1 0.0 2.5 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.1 gi|452209882|ref|YP_007489996.1| - 8.5e-05 22.3 1.4 1.1 9.0 0.0 4.0 3 1 0 4 4 4 1 FAD-NAD(P)-binding Thi4 PF01946.12 gi|452209882|ref|YP_007489996.1| - 0.0001 21.5 0.1 0.14 11.1 0.0 2.3 2 0 0 2 2 2 2 Thi4 family ApbA PF02558.11 gi|452209882|ref|YP_007489996.1| - 0.00024 20.5 0.3 0.013 14.9 0.0 2.5 2 1 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Lycopene_cycl PF05834.7 gi|452209882|ref|YP_007489996.1| - 0.00057 18.9 0.1 0.59 8.9 0.0 2.5 2 1 1 3 3 3 2 Lycopene cyclase protein FAD_oxidored PF12831.2 gi|452209882|ref|YP_007489996.1| - 0.0009 18.4 1.8 0.025 13.6 0.2 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase 3HCDH_N PF02737.13 gi|452209882|ref|YP_007489996.1| - 0.00095 18.8 0.1 0.019 14.5 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.9 gi|452209882|ref|YP_007489996.1| - 0.001 17.7 0.1 0.11 11.1 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase NAD_Gly3P_dh_N PF01210.18 gi|452209882|ref|YP_007489996.1| - 0.0013 18.5 0.1 1.7 8.3 0.0 2.5 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.19 gi|452209882|ref|YP_007489996.1| - 0.0017 17.5 0.0 0.0037 16.4 0.0 1.5 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase ThiF PF00899.16 gi|452209882|ref|YP_007489996.1| - 0.0043 16.8 0.6 0.21 11.4 0.1 2.3 2 0 0 2 2 2 1 ThiF family TrkA_N PF02254.13 gi|452209882|ref|YP_007489996.1| - 0.0044 17.0 0.3 1.7 8.7 0.1 2.5 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.14 gi|452209882|ref|YP_007489996.1| - 0.0047 16.1 1.3 1.5 7.9 0.0 2.5 2 1 1 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|452209882|ref|YP_007489996.1| - 0.0072 16.4 0.1 3.9 7.5 0.0 2.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_10 PF13460.1 gi|452209882|ref|YP_007489996.1| - 0.0072 16.3 0.3 0.23 11.4 0.1 2.4 2 0 0 2 2 2 1 NADH(P)-binding CPSase_L_chain PF00289.17 gi|452209882|ref|YP_007489996.1| - 0.011 15.8 0.0 0.18 11.9 0.0 2.3 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain AlaDh_PNT_C PF01262.16 gi|452209882|ref|YP_007489996.1| - 0.013 15.0 0.0 1.7 8.1 0.0 2.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.9 gi|452209882|ref|YP_007489996.1| - 0.031 13.6 0.8 0.36 10.1 0.1 2.2 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Saccharop_dh PF03435.13 gi|452209882|ref|YP_007489996.1| - 0.058 12.3 0.4 0.22 10.4 0.0 1.9 2 0 0 2 2 2 0 Saccharopine dehydrogenase Ldh_1_N PF00056.18 gi|452209882|ref|YP_007489996.1| - 0.077 12.8 0.1 15 5.3 0.0 2.5 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain IlvN PF07991.7 gi|452209882|ref|YP_007489996.1| - 0.078 12.3 0.0 3.7 6.8 0.0 2.2 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain RTC PF01137.16 gi|452209883|ref|YP_007489997.1| - 5e-95 316.6 0.0 5.7e-95 316.4 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.8 gi|452209883|ref|YP_007489997.1| - 1.8e-22 79.2 0.1 3.3e-22 78.4 0.1 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain PTS_2-RNA PF01885.11 gi|452209884|ref|YP_007489998.1| - 2.6e-38 131.2 0.0 3.1e-38 130.9 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Phlebovirus_G1 PF07243.6 gi|452209884|ref|YP_007489998.1| - 0.0027 15.9 0.0 0.0033 15.6 0.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 tRNA_anti-codon PF01336.20 gi|452209885|ref|YP_007489999.1| - 3.9e-32 109.9 13.3 1.3e-07 31.3 0.1 4.4 4 0 0 4 4 4 4 OB-fold nucleic acid binding domain Rep_fac-A_C PF08646.5 gi|452209885|ref|YP_007489999.1| - 4.6e-05 23.1 1.9 5.3 6.7 0.0 4.1 4 0 0 4 4 4 3 Replication factor-A C terminal domain DUF3127 PF11325.3 gi|452209885|ref|YP_007489999.1| - 0.011 15.7 1.4 7 6.7 0.0 4.2 4 0 0 4 4 4 0 Domain of unknown function (DUF3127) T2SS-T3SS_pil_N PF13629.1 gi|452209885|ref|YP_007489999.1| - 0.06 12.8 3.6 19 4.8 0.0 4.1 4 0 0 4 4 4 0 Pilus formation protein N terminal region CBS PF00571.23 gi|452209886|ref|YP_007490000.1| - 2e-22 78.7 4.5 1.2e-12 47.4 0.2 2.2 2 0 0 2 2 2 2 CBS domain CBS PF00571.23 gi|452209887|ref|YP_007490001.1| - 2e-50 168.3 8.5 1.1e-13 50.6 0.0 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.23 gi|452209888|ref|YP_007490002.1| - 2.8e-56 187.0 3.8 1.1e-16 60.2 0.1 4.2 4 0 0 4 4 4 4 CBS domain CBS PF00571.23 gi|452209889|ref|YP_007490003.1| - 2.9e-49 164.5 16.4 1.4e-12 47.1 0.5 4.1 4 0 0 4 4 4 4 CBS domain PduV-EutP PF10662.4 gi|452209889|ref|YP_007490003.1| - 0.015 14.7 0.2 2.6 7.5 0.1 2.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation CBS PF00571.23 gi|452209890|ref|YP_007490004.1| - 2.5e-46 155.2 9.2 1.9e-13 49.9 0.1 4.1 4 0 0 4 4 4 4 CBS domain AIM24 PF01987.12 gi|452209891|ref|YP_007490005.1| - 5.2e-68 228.7 0.6 6e-68 228.5 0.4 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DNA_ligase_A_M PF01068.16 gi|452209892|ref|YP_007490006.1| - 7.7e-25 87.4 0.1 2.2e-24 85.9 0.0 1.7 1 1 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.5 gi|452209892|ref|YP_007490006.1| - 1.5e-07 31.3 0.1 1.6e-06 28.0 0.1 2.2 1 1 0 1 1 1 1 RNA ligase TusA PF01206.12 gi|452209892|ref|YP_007490006.1| - 0.0077 15.8 0.0 0.36 10.4 0.0 2.8 2 0 0 2 2 2 1 Sulfurtransferase TusA DDE_Tnp_1_6 PF13751.1 gi|452209893|ref|YP_007490007.1| - 1.7e-28 99.1 6.3 4.4e-28 97.7 3.9 2.2 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|452209893|ref|YP_007490007.1| - 1.6e-19 70.3 0.2 3.3e-19 69.2 0.1 1.7 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.6 gi|452209893|ref|YP_007490007.1| - 4.6e-18 64.8 0.0 1.5e-17 63.2 0.0 1.9 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.1 gi|452209893|ref|YP_007490007.1| - 0.0023 18.0 0.1 0.088 13.0 0.0 2.8 2 0 0 2 2 2 1 Transposase DDE domain AhpC-TSA PF00578.16 gi|452209893|ref|YP_007490007.1| - 0.045 13.4 0.4 0.1 12.2 0.3 1.5 1 0 0 1 1 1 0 AhpC/TSA family GTP_EFTU_D4 PF14578.1 gi|452209894|ref|YP_007490008.1| - 0.0018 17.9 1.1 0.013 15.1 0.5 2.4 2 1 0 2 2 2 1 Elongation factor Tu domain 4 Sarcoglycan_1 PF04790.8 gi|452209894|ref|YP_007490008.1| - 0.053 12.6 0.1 0.084 12.0 0.0 1.3 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein AIG2 PF06094.7 gi|452209895|ref|YP_007490009.1| - 2.8e-09 37.4 0.1 4e-09 36.9 0.1 1.2 1 0 0 1 1 1 1 AIG2-like family AP_endonuc_2 PF01261.19 gi|452209896|ref|YP_007490010.1| - 4.6e-35 120.8 0.0 5.5e-35 120.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Ribonuc_P_40 PF08584.6 gi|452209896|ref|YP_007490010.1| - 0.064 12.2 0.0 0.092 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease P 40kDa (Rpp40) subunit RNA_binding PF01877.12 gi|452209897|ref|YP_007490011.1| - 8.4e-24 83.8 0.0 1e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 RNA binding DUF668 PF05003.7 gi|452209897|ref|YP_007490011.1| - 0.12 12.5 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF668) AAA_18 PF13238.1 gi|452209898|ref|YP_007490012.1| - 2.6e-16 60.1 0.1 3.9e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452209898|ref|YP_007490012.1| - 9.4e-12 45.8 0.0 1.6e-11 45.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|452209898|ref|YP_007490012.1| - 7.7e-06 25.8 0.0 1.1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|452209898|ref|YP_007490012.1| - 5.4e-05 22.3 0.0 6.6e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin ADK PF00406.17 gi|452209898|ref|YP_007490012.1| - 0.0018 18.1 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Adenylate kinase KTI12 PF08433.5 gi|452209898|ref|YP_007490012.1| - 0.048 12.8 0.0 0.16 11.1 0.0 2.0 1 1 0 1 1 1 0 Chromatin associated protein KTI12 Cdc6_C PF09079.6 gi|452209899|ref|YP_007490013.1| - 7e-28 96.1 0.4 1.8e-27 94.8 0.3 1.8 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|452209899|ref|YP_007490013.1| - 1.1e-05 25.5 0.0 2.6e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452209899|ref|YP_007490013.1| - 0.0033 17.6 0.1 0.0082 16.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|452209899|ref|YP_007490013.1| - 0.018 14.7 0.2 0.037 13.7 0.1 1.5 1 0 0 1 1 1 0 Archaeal ATPase DEAD PF00270.24 gi|452209899|ref|YP_007490013.1| - 0.097 12.1 0.7 1.2 8.6 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase SSF PF00474.12 gi|452209900|ref|YP_007490014.1| - 7.7e-104 347.5 28.9 1e-103 347.1 20.0 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Pyridoxal_deC PF00282.14 gi|452209901|ref|YP_007490015.1| - 3.8e-33 114.4 0.0 5.6e-33 113.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|452209901|ref|YP_007490015.1| - 1.8e-08 33.5 0.1 5.3e-08 32.0 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|452209901|ref|YP_007490015.1| - 1.5e-07 30.7 0.0 1.7e-06 27.2 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|452209901|ref|YP_007490015.1| - 0.1 11.7 0.0 0.15 11.1 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase CBS PF00571.23 gi|452209902|ref|YP_007490016.1| - 1.8e-27 94.8 3.4 3.3e-13 49.1 0.0 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.17 gi|452209902|ref|YP_007490016.1| - 1.3e-20 73.2 8.7 3.4e-15 55.5 2.4 2.3 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.1 gi|452209902|ref|YP_007490016.1| - 0.00039 19.8 0.3 0.00039 19.8 0.2 2.1 2 0 0 2 2 2 1 Peptidase M50B-like TraB PF01963.12 gi|452209903|ref|YP_007490017.1| - 2.1e-52 178.1 0.0 2.7e-52 177.7 0.0 1.1 1 0 0 1 1 1 1 TraB family DUF1625 PF07787.7 gi|452209903|ref|YP_007490017.1| - 1.4 8.1 5.0 22 4.2 2.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1625) FTR_C PF02741.10 gi|452209905|ref|YP_007490019.1| - 5.3e-69 230.7 3.2 8.4e-69 230.1 2.2 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.13 gi|452209905|ref|YP_007490019.1| - 2.2e-66 222.0 1.0 3.3e-66 221.4 0.1 1.7 2 1 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase PAS_4 PF08448.5 gi|452209905|ref|YP_007490019.1| - 0.053 13.5 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 PAS fold CheD PF03975.8 gi|452209906|ref|YP_007490020.1| - 4.4e-32 110.2 0.1 5.9e-32 109.8 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.7 gi|452209907|ref|YP_007490021.1| - 1.9e-09 37.0 0.5 0.00059 19.5 0.1 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.1 gi|452209907|ref|YP_007490021.1| - 0.00047 19.9 0.3 0.0036 17.1 0.0 2.1 2 0 0 2 2 2 1 Chemotaxis phosphatase CheX CheR PF01739.13 gi|452209908|ref|YP_007490022.1| - 2.2e-58 196.7 0.2 3.4e-58 196.1 0.1 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.10 gi|452209908|ref|YP_007490022.1| - 2.7e-15 55.4 0.4 5.9e-15 54.3 0.3 1.6 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_12 PF08242.7 gi|452209908|ref|YP_007490022.1| - 1.1e-05 25.8 0.1 4.3e-05 23.8 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452209908|ref|YP_007490022.1| - 2.2e-05 24.1 0.2 0.16 11.5 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452209908|ref|YP_007490022.1| - 5.9e-05 23.6 0.0 0.00014 22.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452209908|ref|YP_007490022.1| - 0.018 14.7 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452209908|ref|YP_007490022.1| - 0.025 15.0 0.1 0.46 10.9 0.1 2.7 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|452209908|ref|YP_007490022.1| - 0.051 12.9 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Nodulation protein S (NodS) CheW PF01584.14 gi|452209909|ref|YP_007490023.1| - 1.2e-25 89.5 0.8 3.9e-25 87.9 0.4 1.9 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.21 gi|452209909|ref|YP_007490023.1| - 6.9e-25 86.9 0.2 1.4e-24 85.9 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.18 gi|452209909|ref|YP_007490023.1| - 1.6e-20 72.8 0.1 4.2e-20 71.5 0.1 1.8 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.9 gi|452209909|ref|YP_007490023.1| - 1.8e-15 57.0 1.5 1.8e-15 57.0 1.0 2.8 3 1 0 3 3 3 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.1 gi|452209909|ref|YP_007490023.1| - 0.00019 21.1 0.0 0.00019 21.1 0.0 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIP-T3 PF10243.4 gi|452209909|ref|YP_007490023.1| - 0.014 13.8 53.3 0.021 13.2 36.9 1.3 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 CENP-T PF15511.1 gi|452209909|ref|YP_007490023.1| - 0.36 10.0 22.5 0.53 9.4 15.6 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T Mitofilin PF09731.4 gi|452209909|ref|YP_007490023.1| - 0.75 8.3 39.3 9.8 4.6 0.0 2.1 2 0 0 2 2 2 0 Mitochondrial inner membrane protein Borrelia_P83 PF05262.6 gi|452209909|ref|YP_007490023.1| - 3.9 5.6 30.6 5.4 5.1 21.2 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein CheB_methylest PF01339.12 gi|452209910|ref|YP_007490024.1| - 1.2e-66 223.6 0.1 1e-65 220.5 0.0 2.2 2 0 0 2 2 2 1 CheB methylesterase Response_reg PF00072.19 gi|452209910|ref|YP_007490024.1| - 1.5e-21 76.4 0.5 3.7e-21 75.2 0.2 1.8 2 0 0 2 2 2 1 Response regulator receiver domain Eno-Rase_NADH_b PF12242.3 gi|452209910|ref|YP_007490024.1| - 0.043 13.6 0.0 0.092 12.5 0.0 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Response_reg PF00072.19 gi|452209911|ref|YP_007490025.1| - 2.7e-28 98.2 1.9 3e-28 98.0 1.3 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|452209912|ref|YP_007490026.1| - 2.3e-22 79.1 0.0 2.5e-22 78.9 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MCPsignal PF00015.16 gi|452209913|ref|YP_007490027.1| - 1e-56 191.8 65.3 4e-56 189.9 19.3 4.9 4 1 2 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.20 gi|452209913|ref|YP_007490027.1| - 1.4e-11 44.4 0.0 1.4e-11 44.4 0.0 5.1 4 2 1 5 5 5 1 HAMP domain SNARE PF05739.14 gi|452209913|ref|YP_007490027.1| - 0.029 14.0 18.2 0.059 13.0 2.2 5.6 3 1 1 4 4 4 0 SNARE domain DUF948 PF06103.6 gi|452209913|ref|YP_007490027.1| - 0.043 13.6 26.6 0.33 10.8 1.7 5.9 3 2 2 6 6 6 0 Bacterial protein of unknown function (DUF948) cwf21 PF08312.7 gi|452209913|ref|YP_007490027.1| - 0.1 12.4 4.1 1.2 9.0 0.0 3.7 3 0 0 3 3 3 0 cwf21 domain Alg14 PF08660.6 gi|452209913|ref|YP_007490027.1| - 1 9.3 0.0 1 9.3 0.0 3.0 3 0 0 3 3 3 0 Oligosaccharide biosynthesis protein Alg14 like PhageMin_Tail PF10145.4 gi|452209913|ref|YP_007490027.1| - 4.3 6.9 24.5 0.089 12.4 8.1 3.2 3 1 0 3 3 3 0 Phage-related minor tail protein CheW PF01584.14 gi|452209914|ref|YP_007490028.1| - 5e-35 119.9 0.5 6.1e-35 119.6 0.3 1.1 1 0 0 1 1 1 1 CheW-like domain Pol_alpha_B_N PF08418.5 gi|452209914|ref|YP_007490028.1| - 0.012 15.2 4.3 0.017 14.6 2.9 1.3 1 0 0 1 1 1 0 DNA polymerase alpha subunit B N-terminal Pex14_N PF04695.8 gi|452209914|ref|YP_007490028.1| - 1.4 8.9 7.8 2.3 8.2 5.4 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Herpes_capsid PF06112.6 gi|452209914|ref|YP_007490028.1| - 5.8 6.9 13.4 8.6 6.3 9.3 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein GntP_permease PF02447.11 gi|452209915|ref|YP_007490029.1| - 4e-66 223.3 20.1 5.3e-66 222.9 13.9 1.1 1 0 0 1 1 1 1 GntP family permease DUF2583 PF10762.4 gi|452209915|ref|YP_007490029.1| - 3.3 7.9 5.3 8.4 6.6 0.2 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF2583) Fe_dep_repress PF01325.14 gi|452209916|ref|YP_007490030.1| - 9.2e-14 51.1 0.0 1.4e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|452209916|ref|YP_007490030.1| - 1.4e-05 24.6 0.0 2.2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.2 gi|452209916|ref|YP_007490030.1| - 2.2e-05 24.0 0.0 4.1e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|452209916|ref|YP_007490030.1| - 0.00011 21.8 0.0 0.00027 20.6 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.2 gi|452209916|ref|YP_007490030.1| - 0.0002 21.1 0.0 0.0016 18.2 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|452209916|ref|YP_007490030.1| - 0.00045 20.4 0.0 0.00061 20.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|452209916|ref|YP_007490030.1| - 0.0023 17.4 0.0 0.24 10.9 0.0 2.1 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain TrmB PF01978.14 gi|452209916|ref|YP_007490030.1| - 0.0025 17.4 0.0 0.0049 16.5 0.0 1.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 gi|452209916|ref|YP_007490030.1| - 0.0062 16.6 0.0 0.01 15.9 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.5 gi|452209916|ref|YP_007490030.1| - 0.016 14.7 0.0 0.029 13.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|452209916|ref|YP_007490030.1| - 0.037 13.8 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Topoisom_bac PF01131.15 gi|452209916|ref|YP_007490030.1| - 0.038 12.8 0.0 0.045 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase HTH_23 PF13384.1 gi|452209916|ref|YP_007490030.1| - 0.061 12.9 0.0 5.9 6.6 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_5 PF01022.15 gi|452209916|ref|YP_007490030.1| - 0.076 12.6 0.0 0.29 10.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family TroA PF01297.12 gi|452209917|ref|YP_007490031.1| - 1.6e-74 250.3 0.2 1.9e-74 250.1 0.2 1.0 1 0 0 1 1 1 1 Periplasmic solute binding protein family Aminotran_MocR PF12897.2 gi|452209917|ref|YP_007490031.1| - 0.022 13.3 0.0 0.036 12.6 0.0 1.3 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glyco_tran_WecB PF03808.8 gi|452209917|ref|YP_007490031.1| - 0.081 12.3 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family FtsH_ext PF06480.10 gi|452209917|ref|YP_007490031.1| - 0.12 12.5 0.5 0.5 10.5 0.1 2.0 2 1 0 2 2 2 0 FtsH Extracellular ABC_tran PF00005.22 gi|452209918|ref|YP_007490032.1| - 2.6e-29 102.2 0.0 3.7e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209918|ref|YP_007490032.1| - 1.1e-19 71.4 0.3 3.1e-11 43.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452209918|ref|YP_007490032.1| - 9.8e-08 31.4 0.0 2.5e-07 30.1 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452209918|ref|YP_007490032.1| - 6.9e-06 25.3 0.4 0.0082 15.2 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|452209918|ref|YP_007490032.1| - 0.00035 20.7 0.1 0.0011 19.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|452209918|ref|YP_007490032.1| - 0.00083 19.7 1.9 0.0014 19.0 1.3 1.6 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|452209918|ref|YP_007490032.1| - 0.00089 19.1 0.0 0.024 14.5 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|452209918|ref|YP_007490032.1| - 0.005 16.3 0.4 0.15 11.4 0.1 2.1 1 1 0 2 2 2 1 AAA-like domain AAA PF00004.24 gi|452209918|ref|YP_007490032.1| - 0.0051 16.9 1.3 0.064 13.4 0.9 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.1 gi|452209918|ref|YP_007490032.1| - 0.011 15.4 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain Arch_ATPase PF01637.13 gi|452209918|ref|YP_007490032.1| - 0.012 15.3 0.4 0.023 14.3 0.3 1.8 1 1 0 1 1 1 0 Archaeal ATPase T2SE PF00437.15 gi|452209918|ref|YP_007490032.1| - 0.023 13.5 0.0 0.042 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|452209918|ref|YP_007490032.1| - 0.041 13.4 0.1 0.082 12.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.10 gi|452209918|ref|YP_007490032.1| - 0.056 12.1 0.0 0.14 10.8 0.0 1.5 1 1 0 2 2 2 0 Rad17 cell cycle checkpoint protein ABC_ATPase PF09818.4 gi|452209918|ref|YP_007490032.1| - 0.061 11.9 0.7 6.4 5.2 0.5 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.1 gi|452209918|ref|YP_007490032.1| - 0.061 13.1 0.2 0.55 10.0 0.1 2.3 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|452209918|ref|YP_007490032.1| - 0.065 12.8 0.9 0.36 10.4 0.4 2.0 2 0 0 2 2 2 0 NACHT domain AAA_14 PF13173.1 gi|452209918|ref|YP_007490032.1| - 0.079 12.8 0.6 4.4 7.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452209918|ref|YP_007490032.1| - 0.16 11.7 0.5 3.5 7.3 0.1 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|452209918|ref|YP_007490032.1| - 0.17 12.7 1.9 0.73 10.6 1.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|452209918|ref|YP_007490032.1| - 0.22 11.8 1.0 1.1 9.6 0.7 2.2 1 1 0 1 1 1 0 AAA domain ABC-3 PF00950.12 gi|452209919|ref|YP_007490033.1| - 4.1e-82 275.3 28.6 4.9e-82 275.0 19.8 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.13 gi|452209919|ref|YP_007490033.1| - 9.8e-10 37.7 18.3 9.8e-10 37.7 12.7 1.8 1 1 0 1 1 1 1 FecCD transport family Ninjurin PF04923.7 gi|452209919|ref|YP_007490033.1| - 0.23 11.2 4.0 0.62 9.8 2.8 1.7 1 0 0 1 1 1 0 Ninjurin DUF11 PF01345.13 gi|452209921|ref|YP_007490035.1| - 5.1e-45 151.4 73.5 1.1e-06 28.5 1.0 11.3 9 3 0 9 9 9 8 Domain of unknown function DUF11 MazG PF03819.12 gi|452209921|ref|YP_007490035.1| - 0.008 16.0 0.1 14 5.7 0.0 3.9 4 0 0 4 4 4 1 MazG nucleotide pyrophosphohydrolase domain AbrB-like PF14250.1 gi|452209921|ref|YP_007490035.1| - 0.073 12.9 4.6 15 5.5 0.1 4.9 5 0 0 5 5 5 0 AbrB-like transcriptional regulator DUF2393 PF09624.5 gi|452209921|ref|YP_007490035.1| - 0.4 10.1 30.8 0.68 9.4 0.1 6.8 7 0 0 7 7 7 0 Protein of unknown function (DUF2393) TPP_enzyme_C PF02775.16 gi|452209922|ref|YP_007490036.1| - 8.7e-28 96.8 0.0 1.5e-27 96.0 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|452209923|ref|YP_007490037.1| - 1.2e-66 224.5 0.1 1.6e-66 224.0 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|452209923|ref|YP_007490037.1| - 8.1e-07 29.0 0.0 1.9e-06 27.8 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4 PF00037.22 gi|452209924|ref|YP_007490038.1| - 4.3e-13 48.2 22.7 5.5e-08 32.0 3.2 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452209924|ref|YP_007490038.1| - 1.9e-11 43.5 22.3 1.3e-08 34.5 8.9 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452209924|ref|YP_007490038.1| - 1e-09 37.8 20.3 1.7e-05 24.4 2.5 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452209924|ref|YP_007490038.1| - 2.1e-09 36.7 16.8 6.1e-05 22.6 2.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452209924|ref|YP_007490038.1| - 1.9e-08 34.5 12.4 1.9e-08 34.5 8.6 2.3 1 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452209924|ref|YP_007490038.1| - 1.1e-07 31.5 10.6 1.1e-07 31.5 7.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452209924|ref|YP_007490038.1| - 1.8e-07 31.2 15.5 3.3e-07 30.4 9.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452209924|ref|YP_007490038.1| - 9.4e-06 26.2 17.6 0.0011 19.7 1.6 2.9 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|452209924|ref|YP_007490038.1| - 2.5e-05 24.2 18.5 0.0025 18.0 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452209924|ref|YP_007490038.1| - 0.00023 21.1 19.2 0.00054 19.9 10.2 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452209924|ref|YP_007490038.1| - 0.0012 19.1 18.3 0.47 10.8 2.1 3.1 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452209924|ref|YP_007490038.1| - 0.013 15.3 5.2 0.013 15.3 3.6 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452209924|ref|YP_007490038.1| - 0.2 12.0 18.3 0.97 9.9 2.8 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452209924|ref|YP_007490038.1| - 0.23 11.8 19.0 0.11 12.8 2.4 3.0 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|452209924|ref|YP_007490038.1| - 0.25 11.9 18.4 0.2 12.2 2.4 2.6 2 1 1 3 3 2 0 4Fe-4S single cluster domain TNFR_c6 PF00020.13 gi|452209924|ref|YP_007490038.1| - 4.6 7.4 12.1 12 6.0 0.1 3.3 3 0 0 3 3 3 0 TNFR/NGFR cysteine-rich region POR PF01558.13 gi|452209925|ref|YP_007490039.1| - 2.4e-40 138.2 1.1 2.8e-40 138.0 0.8 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Peptidase_S24 PF00717.18 gi|452209926|ref|YP_007490040.1| - 5.1e-05 22.8 0.2 9.1e-05 22.0 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.11 gi|452209927|ref|YP_007490041.1| - 1.2e-16 60.6 0.0 1.9e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|452209927|ref|YP_007490041.1| - 1.6e-11 44.3 0.0 3.6e-11 43.1 0.0 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|452209927|ref|YP_007490041.1| - 6.9e-10 38.6 0.2 1.3e-09 37.7 0.1 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|452209927|ref|YP_007490041.1| - 0.00023 20.9 0.0 0.00053 19.8 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Wyosine_form PF08608.7 gi|452209928|ref|YP_007490042.1| - 5e-25 87.3 0.0 1.9e-24 85.5 0.0 2.0 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.16 gi|452209928|ref|YP_007490042.1| - 1.7e-21 77.1 0.2 1.2e-19 71.0 0.0 2.8 3 1 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|452209928|ref|YP_007490042.1| - 0.0036 17.2 0.0 0.013 15.5 0.0 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain HAD_2 PF13419.1 gi|452209928|ref|YP_007490042.1| - 0.026 14.7 0.0 0.12 12.5 0.0 2.0 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase eRF1_2 PF03464.10 gi|452209929|ref|YP_007490043.1| - 5.5e-35 120.5 0.0 9.7e-35 119.7 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|452209929|ref|YP_007490043.1| - 7.1e-31 106.7 0.0 3.5e-30 104.5 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|452209929|ref|YP_007490043.1| - 3e-23 81.8 0.0 5.8e-23 80.9 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 zinc_ribbon_2 PF13240.1 gi|452209929|ref|YP_007490043.1| - 0.012 15.0 1.5 0.3 10.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|452209929|ref|YP_007490043.1| - 0.029 14.0 0.3 7.7 6.2 0.0 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit AMP_N PF05195.11 gi|452209929|ref|YP_007490043.1| - 0.038 13.3 0.0 0.4 10.0 0.0 2.5 3 0 0 3 3 3 0 Aminopeptidase P, N-terminal domain HypA PF01155.14 gi|452209929|ref|YP_007490043.1| - 0.092 12.4 0.1 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_4 PF13717.1 gi|452209929|ref|YP_007490043.1| - 0.11 12.2 0.3 4.2 7.1 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|452209929|ref|YP_007490043.1| - 0.12 11.9 0.3 5.7 6.6 0.0 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|452209929|ref|YP_007490043.1| - 0.23 10.7 2.8 1.1 8.6 2.0 1.9 1 1 1 2 2 2 0 zinc-ribbon domain tRNA-synt_1d PF00750.14 gi|452209930|ref|YP_007490044.1| - 4.6e-57 193.4 0.1 6.2e-57 193.0 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|452209930|ref|YP_007490044.1| - 4.6e-33 113.7 0.1 1.1e-32 112.4 0.0 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|452209930|ref|YP_007490044.1| - 1.6e-13 50.9 0.1 5.1e-13 49.3 0.0 1.9 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.13 gi|452209930|ref|YP_007490044.1| - 2.1e-07 29.9 0.0 3.4e-06 25.9 0.0 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|452209930|ref|YP_007490044.1| - 2e-06 26.7 0.0 0.0014 17.3 0.0 3.3 2 1 1 3 3 3 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|452209930|ref|YP_007490044.1| - 3.8e-05 22.9 0.1 6.2e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.17 gi|452209930|ref|YP_007490044.1| - 0.0036 15.3 0.0 0.0052 14.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) TUG-UBL1 PF11470.3 gi|452209930|ref|YP_007490044.1| - 0.0091 15.8 0.0 0.031 14.1 0.0 1.8 2 0 0 2 2 2 1 GLUT4 regulating protein TUG DUF2683 PF10884.3 gi|452209930|ref|YP_007490044.1| - 0.014 15.2 0.1 0.053 13.4 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2683) Phage_int_SAM_4 PF13495.1 gi|452209931|ref|YP_007490045.1| - 0.0022 18.2 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Asn_synthase PF00733.16 gi|452209934|ref|YP_007490048.1| - 1.8e-17 63.7 0.0 1.2e-07 31.5 0.0 2.2 2 0 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.1 gi|452209934|ref|YP_007490048.1| - 5.5e-05 22.9 0.0 0.00012 21.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain QueC PF06508.8 gi|452209934|ref|YP_007490048.1| - 0.00028 20.2 0.0 0.0012 18.1 0.0 2.0 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC GATase_6 PF13522.1 gi|452209934|ref|YP_007490048.1| - 0.0058 16.5 0.0 0.067 13.1 0.0 2.2 2 0 0 2 2 2 1 Glutamine amidotransferase domain NAD_synthase PF02540.12 gi|452209934|ref|YP_007490048.1| - 0.0075 15.1 0.0 0.018 13.9 0.0 1.7 1 0 0 1 1 1 1 NAD synthase GATase_2 PF00310.16 gi|452209934|ref|YP_007490048.1| - 0.039 12.6 0.0 0.12 11.0 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferases class-II Meth_synt_2 PF01717.13 gi|452209935|ref|YP_007490049.1| - 0.00029 19.9 0.1 0.074 12.0 0.0 2.3 2 1 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|452209935|ref|YP_007490049.1| - 0.017 14.4 0.1 0.03 13.5 0.1 1.4 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain HMGL-like PF00682.14 gi|452209935|ref|YP_007490049.1| - 0.045 13.3 0.0 0.087 12.4 0.0 1.5 1 1 0 1 1 1 0 HMGL-like Meth_synt_2 PF01717.13 gi|452209936|ref|YP_007490050.1| - 9.1e-06 24.8 0.0 0.00078 18.5 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain RHH_1 PF01402.16 gi|452209937|ref|YP_007490051.1| - 0.007 16.2 0.1 0.018 14.8 0.0 1.7 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Latarcin PF10279.4 gi|452209937|ref|YP_007490051.1| - 0.0073 16.4 0.2 0.0084 16.2 0.1 1.1 1 0 0 1 1 1 1 Latarcin precursor BLOC1_2 PF10046.4 gi|452209937|ref|YP_007490051.1| - 0.0096 16.0 0.1 0.0096 16.0 0.1 1.1 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4113 PF13438.1 gi|452209937|ref|YP_007490051.1| - 0.16 11.6 1.1 3.2 7.4 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) TRAM PF01938.15 gi|452209938|ref|YP_007490052.1| - 4.5e-17 61.5 0.8 5e-17 61.4 0.6 1.0 1 0 0 1 1 1 1 TRAM domain S1 PF00575.18 gi|452209938|ref|YP_007490052.1| - 0.091 12.8 1.4 0.26 11.4 1.0 1.7 1 1 0 1 1 1 0 S1 RNA binding domain DUF4265 PF14085.1 gi|452209938|ref|YP_007490052.1| - 0.12 12.1 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) TRAM PF01938.15 gi|452209939|ref|YP_007490053.1| - 1.1e-16 60.2 1.1 1.3e-16 60.1 0.8 1.0 1 0 0 1 1 1 1 TRAM domain S1 PF00575.18 gi|452209939|ref|YP_007490053.1| - 0.065 13.3 2.2 0.18 11.9 1.5 1.7 1 1 0 1 1 1 0 S1 RNA binding domain DUF4265 PF14085.1 gi|452209939|ref|YP_007490053.1| - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) TRAM PF01938.15 gi|452209940|ref|YP_007490054.1| - 4.5e-14 51.9 0.4 5.7e-14 51.6 0.3 1.1 1 0 0 1 1 1 1 TRAM domain Bactofilin PF04519.8 gi|452209941|ref|YP_007490055.1| - 2.8e-05 24.0 0.6 4.8e-05 23.2 0.3 1.5 1 1 0 1 1 1 1 Polymer-forming cytoskeletal Hexapep PF00132.19 gi|452209941|ref|YP_007490055.1| - 0.0091 15.4 0.6 0.1 12.1 0.0 2.7 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) DUF3494 PF11999.3 gi|452209941|ref|YP_007490055.1| - 0.14 11.8 0.1 0.27 10.8 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3494) Borrelia_P13 PF05628.7 gi|452209941|ref|YP_007490055.1| - 0.19 11.5 1.0 0.39 10.5 0.1 1.7 1 1 1 2 2 2 0 Borrelia membrane protein P13 ABC_tran PF00005.22 gi|452209942|ref|YP_007490056.1| - 9.7e-33 113.3 0.0 1.4e-32 112.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452209942|ref|YP_007490056.1| - 1e-06 28.9 0.1 0.023 14.6 0.0 2.5 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|452209942|ref|YP_007490056.1| - 1.1e-05 25.4 0.0 1.8e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|452209942|ref|YP_007490056.1| - 0.00012 22.2 0.5 0.0016 18.6 0.3 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 gi|452209942|ref|YP_007490056.1| - 0.00092 18.4 0.1 0.0015 17.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|452209942|ref|YP_007490056.1| - 0.0039 17.3 0.4 0.02 15.0 0.3 2.2 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|452209942|ref|YP_007490056.1| - 0.0084 15.5 0.0 0.014 14.8 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.1 gi|452209942|ref|YP_007490056.1| - 0.0094 15.9 0.1 0.022 14.7 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.1 gi|452209942|ref|YP_007490056.1| - 0.01 15.7 0.0 0.028 14.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|452209942|ref|YP_007490056.1| - 0.016 14.7 0.0 0.035 13.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452209942|ref|YP_007490056.1| - 0.019 14.3 0.0 0.037 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.10 gi|452209942|ref|YP_007490056.1| - 0.02 13.5 0.0 0.027 13.1 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein Arch_ATPase PF01637.13 gi|452209942|ref|YP_007490056.1| - 0.021 14.5 0.0 0.052 13.2 0.0 1.6 2 0 0 2 2 2 0 Archaeal ATPase NACHT PF05729.7 gi|452209942|ref|YP_007490056.1| - 0.023 14.3 0.2 0.066 12.8 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.1 gi|452209942|ref|YP_007490056.1| - 0.024 15.4 0.2 0.13 13.0 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452209942|ref|YP_007490056.1| - 0.033 13.9 0.1 0.093 12.4 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.1 gi|452209942|ref|YP_007490056.1| - 0.045 14.0 0.1 0.089 13.1 0.0 1.5 2 0 0 2 2 1 0 AAA domain AAA_18 PF13238.1 gi|452209942|ref|YP_007490056.1| - 0.048 13.9 0.2 0.092 13.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452209942|ref|YP_007490056.1| - 0.059 12.8 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain SbcCD_C PF13558.1 gi|452209942|ref|YP_007490056.1| - 0.061 13.2 0.1 0.16 11.9 0.0 1.7 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PduV-EutP PF10662.4 gi|452209942|ref|YP_007490056.1| - 0.097 12.1 0.2 0.24 10.8 0.1 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ABC_ATPase PF09818.4 gi|452209942|ref|YP_007490056.1| - 0.12 10.8 0.6 0.96 7.9 0.0 2.2 2 1 1 3 3 3 0 Predicted ATPase of the ABC class UPF0079 PF02367.12 gi|452209942|ref|YP_007490056.1| - 0.13 11.8 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_14 PF13173.1 gi|452209942|ref|YP_007490056.1| - 0.13 12.1 0.1 0.31 10.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.14 gi|452209942|ref|YP_007490056.1| - 0.14 11.3 0.0 13 4.9 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.17 gi|452209943|ref|YP_007490057.1| - 5.2e-23 81.5 11.3 5.2e-23 81.5 7.8 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.1 gi|452209944|ref|YP_007490058.1| - 1.4e-41 142.5 0.0 1.9e-41 142.1 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|452209944|ref|YP_007490058.1| - 2.6e-18 66.4 0.0 3.4e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|452209944|ref|YP_007490058.1| - 7.7e-08 32.0 0.0 1e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.15 gi|452209944|ref|YP_007490058.1| - 0.0002 20.6 0.0 0.00075 18.8 0.0 1.8 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 SBP_bac_7 PF03480.8 gi|452209944|ref|YP_007490058.1| - 0.0077 15.3 0.0 0.017 14.2 0.0 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 LysR_substrate PF03466.15 gi|452209944|ref|YP_007490058.1| - 0.054 12.5 0.0 0.09 11.8 0.0 1.3 1 0 0 1 1 1 0 LysR substrate binding domain HTH_3 PF01381.17 gi|452209945|ref|YP_007490059.1| - 2.8e-08 33.4 0.1 7.3e-08 32.1 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|452209945|ref|YP_007490059.1| - 6.2e-06 26.1 0.0 1.3e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452209945|ref|YP_007490059.1| - 0.0044 17.1 0.1 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain CENP-B_N PF04218.8 gi|452209945|ref|YP_007490059.1| - 0.0083 15.5 1.6 0.25 10.7 0.0 3.2 4 0 0 4 4 4 1 CENP-B N-terminal DNA-binding domain HTH_31 PF13560.1 gi|452209945|ref|YP_007490059.1| - 0.058 13.5 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_psq PF05225.11 gi|452209945|ref|YP_007490059.1| - 0.094 12.2 0.8 0.97 9.0 0.0 2.4 2 0 0 2 2 2 0 helix-turn-helix, Psq domain S-layer PF07752.6 gi|452209946|ref|YP_007490060.1| - 9e-186 615.0 33.0 7.9e-96 320.2 6.5 2.5 2 0 0 2 2 2 2 S-layer protein CarboxypepD_reg PF13620.1 gi|452209946|ref|YP_007490060.1| - 7.3e-10 38.7 24.4 6.9e-05 22.8 0.3 6.4 5 1 1 6 6 6 2 Carboxypeptidase regulatory-like domain I-set PF07679.11 gi|452209946|ref|YP_007490060.1| - 5.7e-05 22.8 12.5 0.0038 17.0 0.8 5.6 6 1 0 6 6 6 2 Immunoglobulin I-set domain Y_Y_Y PF07495.8 gi|452209946|ref|YP_007490060.1| - 0.00027 20.6 10.4 0.032 13.9 0.9 4.3 4 1 1 5 5 5 2 Y_Y_Y domain Big_1 PF02369.11 gi|452209946|ref|YP_007490060.1| - 0.007 16.2 0.9 0.007 16.2 0.6 6.8 6 1 0 7 7 7 2 Bacterial Ig-like domain (group 1) Big_3_4 PF13754.1 gi|452209946|ref|YP_007490060.1| - 0.017 15.4 2.4 0.017 15.4 1.6 8.8 8 2 1 9 9 8 0 Bacterial Ig-like domain (group 3) PapC_N PF13954.1 gi|452209946|ref|YP_007490060.1| - 0.041 13.4 0.8 0.78 9.3 0.0 2.8 2 1 1 3 3 3 0 PapC N-terminal domain PEGA PF08308.6 gi|452209946|ref|YP_007490060.1| - 0.047 13.4 6.0 0.23 11.2 0.2 4.1 4 0 0 4 4 3 0 PEGA domain Cupredoxin_1 PF13473.1 gi|452209946|ref|YP_007490060.1| - 0.074 12.9 5.5 0.3 11.0 0.1 4.2 3 1 1 4 4 4 0 Cupredoxin-like domain Fn3-like PF14310.1 gi|452209946|ref|YP_007490060.1| - 0.091 12.7 2.0 10 6.1 0.0 4.1 3 0 0 3 3 3 0 Fibronectin type III-like domain tRNA-synt_1c_C PF03950.13 gi|452209946|ref|YP_007490060.1| - 1.1 8.9 7.2 6.2 6.4 0.0 4.2 4 1 1 5 5 5 0 tRNA synthetases class I (E and Q), anti-codon binding domain DUF4198 PF10670.4 gi|452209946|ref|YP_007490060.1| - 3.6 7.5 12.7 0.69 9.8 0.2 4.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4198) Pollen_Ole_e_I PF01190.12 gi|452209946|ref|YP_007490060.1| - 6.5 6.6 7.5 1.3 8.8 0.1 3.5 5 0 0 5 5 5 0 Pollen proteins Ole e I like DUF1641 PF07849.6 gi|452209947|ref|YP_007490061.1| - 0.084 12.4 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) Radical_SAM PF04055.16 gi|452209948|ref|YP_007490062.1| - 9.3e-16 58.4 0.0 1.7e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|452209948|ref|YP_007490062.1| - 3.4e-10 39.9 0.0 6.9e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452209948|ref|YP_007490062.1| - 4.8e-10 39.7 0.0 8.4e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3381 PF11861.3 gi|452209948|ref|YP_007490062.1| - 0.0029 17.1 0.3 0.005 16.3 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) ATPgrasp_YheCD PF14398.1 gi|452209948|ref|YP_007490062.1| - 0.13 10.9 0.0 0.19 10.5 0.0 1.3 1 0 0 1 1 1 0 YheC/D like ATP-grasp NRDD PF13597.1 gi|452209949|ref|YP_007490063.1| - 7.8e-170 565.5 0.0 9.2e-170 565.3 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Glutaredoxin PF00462.19 gi|452209950|ref|YP_007490064.1| - 5.1e-10 39.1 0.1 6.7e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|452209950|ref|YP_007490064.1| - 0.00015 21.9 0.0 0.00018 21.6 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) ArsC PF03960.10 gi|452209950|ref|YP_007490064.1| - 0.013 15.5 0.0 0.018 15.0 0.0 1.2 1 1 0 1 1 1 0 ArsC family Thioredoxin_2 PF13098.1 gi|452209950|ref|YP_007490064.1| - 0.033 14.3 0.2 0.05 13.8 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain GST_N_3 PF13417.1 gi|452209950|ref|YP_007490064.1| - 0.094 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Rad51 PF08423.6 gi|452209951|ref|YP_007490065.1| - 4e-31 107.8 0.2 4.5e-31 107.6 0.2 1.0 1 0 0 1 1 1 1 Rad51 KaiC PF06745.8 gi|452209951|ref|YP_007490065.1| - 3.6e-15 55.7 0.4 1.7e-14 53.4 0.3 1.9 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|452209951|ref|YP_007490065.1| - 9e-13 48.0 0.0 1.4e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|452209951|ref|YP_007490065.1| - 7.2e-10 38.4 0.0 8.4e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|452209951|ref|YP_007490065.1| - 8.8e-07 28.5 0.0 1e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) IstB_IS21 PF01695.12 gi|452209951|ref|YP_007490065.1| - 8.3e-05 22.0 0.0 0.00014 21.3 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein TrwB_AAD_bind PF10412.4 gi|452209951|ref|YP_007490065.1| - 8.6e-05 21.3 0.2 0.00019 20.1 0.1 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain PhoH PF02562.11 gi|452209951|ref|YP_007490065.1| - 0.00063 19.0 0.1 0.0012 18.1 0.1 1.4 1 0 0 1 1 1 1 PhoH-like protein SRP54 PF00448.17 gi|452209951|ref|YP_007490065.1| - 0.00076 18.9 0.0 0.00089 18.7 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DUF815 PF05673.8 gi|452209951|ref|YP_007490065.1| - 0.00093 18.1 0.0 0.0014 17.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF2075 PF09848.4 gi|452209951|ref|YP_007490065.1| - 0.0023 16.9 0.0 0.0028 16.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CbiA PF01656.18 gi|452209951|ref|YP_007490065.1| - 0.0047 16.3 0.0 0.0066 15.8 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain UvrD-helicase PF00580.16 gi|452209951|ref|YP_007490065.1| - 0.015 14.5 0.0 0.016 14.4 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain MobB PF03205.9 gi|452209951|ref|YP_007490065.1| - 0.017 14.8 0.1 0.033 13.8 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.1 gi|452209951|ref|YP_007490065.1| - 0.019 14.5 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|452209951|ref|YP_007490065.1| - 0.021 14.4 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452209951|ref|YP_007490065.1| - 0.022 14.1 0.0 2.1 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_19 PF13245.1 gi|452209951|ref|YP_007490065.1| - 0.032 13.9 0.0 0.066 12.9 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA PF00004.24 gi|452209951|ref|YP_007490065.1| - 0.056 13.6 0.0 0.076 13.2 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.12 gi|452209951|ref|YP_007490065.1| - 0.06 13.1 0.0 0.12 12.2 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function DUF87 AAA_31 PF13614.1 gi|452209951|ref|YP_007490065.1| - 0.061 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|452209951|ref|YP_007490065.1| - 0.065 14.0 0.0 0.17 12.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain MipZ PF09140.6 gi|452209951|ref|YP_007490065.1| - 0.071 12.1 0.0 0.099 11.7 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ IPT PF01745.11 gi|452209951|ref|YP_007490065.1| - 0.12 11.5 0.1 0.34 10.0 0.1 1.7 2 0 0 2 2 2 0 Isopentenyl transferase PIF1 PF05970.9 gi|452209951|ref|YP_007490065.1| - 0.14 11.0 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase NAD_binding_5 PF07994.7 gi|452209952|ref|YP_007490066.1| - 1.8e-55 188.5 0.0 5.4e-55 186.9 0.0 1.6 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.12 gi|452209952|ref|YP_007490066.1| - 5.8e-34 116.2 0.0 1.1e-33 115.4 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Sec61_beta PF03911.11 gi|452209954|ref|YP_007490068.1| - 9.3e-09 34.9 0.1 1.3e-08 34.5 0.1 1.2 1 0 0 1 1 1 1 Sec61beta family DUF4341 PF14241.1 gi|452209954|ref|YP_007490068.1| - 0.038 13.6 0.3 0.058 13.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4341) Abhydrolase_5 PF12695.2 gi|452209955|ref|YP_007490069.1| - 5.3e-17 61.9 0.0 7.6e-17 61.4 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family AXE1 PF05448.7 gi|452209955|ref|YP_007490069.1| - 2e-10 39.7 0.0 1.6e-09 36.7 0.0 1.9 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Abhydrolase_6 PF12697.2 gi|452209955|ref|YP_007490069.1| - 5.1e-08 33.0 0.0 7.1e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|452209955|ref|YP_007490069.1| - 8.3e-07 28.4 0.0 3.1e-05 23.2 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.13 gi|452209955|ref|YP_007490069.1| - 0.0011 18.2 0.0 0.0016 17.7 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.8 gi|452209955|ref|YP_007490069.1| - 0.0034 16.9 0.0 0.0042 16.6 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.6 gi|452209955|ref|YP_007490069.1| - 0.05 13.3 0.0 0.072 12.7 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal MutS_V PF00488.16 gi|452209956|ref|YP_007490070.1| - 3.2e-09 36.5 0.0 5e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.1 gi|452209956|ref|YP_007490070.1| - 0.009 16.1 0.5 2.6 8.3 0.0 3.1 2 0 0 2 2 2 2 Helix-hairpin-helix domain AAA_23 PF13476.1 gi|452209956|ref|YP_007490070.1| - 0.032 14.5 4.2 1.2 9.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain HHH_2 PF12826.2 gi|452209956|ref|YP_007490070.1| - 0.071 12.9 3.1 0.077 12.8 0.1 2.6 3 0 0 3 3 3 0 Helix-hairpin-helix motif PP_kinase PF02503.12 gi|452209958|ref|YP_007490072.1| - 1e-62 211.3 0.0 1.6e-62 210.7 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.1 gi|452209958|ref|YP_007490072.1| - 4.6e-35 120.0 0.2 7.6e-35 119.3 0.1 1.4 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PP_kinase_C PF13090.1 gi|452209958|ref|YP_007490072.1| - 6.3e-22 77.6 0.0 9.3e-22 77.0 0.0 1.2 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain Ppx-GppA PF02541.11 gi|452209959|ref|YP_007490073.1| - 5.2e-64 216.1 0.9 9.1e-64 215.3 0.6 1.3 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.17 gi|452209959|ref|YP_007490073.1| - 2e-10 40.7 2.1 3.4e-10 39.9 0.7 2.0 2 0 0 2 2 2 1 HD domain FtsA PF14450.1 gi|452209959|ref|YP_007490073.1| - 0.00014 21.7 0.0 0.038 13.8 0.0 2.8 2 1 0 2 2 2 2 Cell division protein FtsA Hydantoinase_A PF01968.13 gi|452209959|ref|YP_007490073.1| - 0.017 14.2 0.3 0.065 12.3 0.0 2.0 1 1 1 2 2 2 0 Hydantoinase/oxoprolinase CAF1 PF04857.15 gi|452209959|ref|YP_007490073.1| - 0.054 12.8 0.0 0.1 11.9 0.0 1.4 1 0 0 1 1 1 0 CAF1 family ribonuclease AAA_16 PF13191.1 gi|452209960|ref|YP_007490074.1| - 1.9e-12 47.5 0.0 5.1e-12 46.1 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain Cdc6_C PF09079.6 gi|452209960|ref|YP_007490074.1| - 2.3e-08 33.6 0.1 6.5e-08 32.1 0.1 1.8 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|452209960|ref|YP_007490074.1| - 2.7e-06 27.5 0.0 5.2e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452209960|ref|YP_007490074.1| - 8.4e-06 26.0 0.0 1.8e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.1 gi|452209960|ref|YP_007490074.1| - 0.0001 22.0 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|452209960|ref|YP_007490074.1| - 0.0019 17.9 0.1 0.0045 16.7 0.1 1.6 1 0 0 1 1 1 1 Part of AAA domain Arch_ATPase PF01637.13 gi|452209960|ref|YP_007490074.1| - 0.0019 17.9 0.0 0.0066 16.1 0.0 1.8 2 0 0 2 2 2 1 Archaeal ATPase IstB_IS21 PF01695.12 gi|452209960|ref|YP_007490074.1| - 0.0045 16.4 0.1 0.58 9.5 0.0 2.4 2 0 0 2 2 2 1 IstB-like ATP binding protein DUF815 PF05673.8 gi|452209960|ref|YP_007490074.1| - 0.011 14.6 0.0 0.05 12.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Zeta_toxin PF06414.7 gi|452209960|ref|YP_007490074.1| - 0.012 14.7 0.0 0.022 13.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_32 PF13654.1 gi|452209960|ref|YP_007490074.1| - 0.028 13.0 0.0 0.63 8.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|452209960|ref|YP_007490074.1| - 0.033 13.5 0.0 0.11 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452209960|ref|YP_007490074.1| - 0.048 13.3 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|452209960|ref|YP_007490074.1| - 0.064 12.2 0.0 0.1 11.6 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus DUF835 PF05763.7 gi|452209960|ref|YP_007490074.1| - 0.067 12.7 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF835) Phage-MuB_C PF09077.6 gi|452209960|ref|YP_007490074.1| - 0.09 12.4 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Mu B transposition protein, C terminal AAA_24 PF13479.1 gi|452209960|ref|YP_007490074.1| - 0.15 11.6 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Penicillinase_R PF03965.11 gi|452209960|ref|YP_007490074.1| - 0.16 12.0 0.0 0.38 10.8 0.0 1.7 1 0 0 1 1 1 0 Penicillinase repressor AAA_33 PF13671.1 gi|452209960|ref|YP_007490074.1| - 0.16 11.8 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Cpn60_TCP1 PF00118.19 gi|452209961|ref|YP_007490075.1| - 2.6e-169 563.9 14.7 2.9e-169 563.7 10.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HSP70 PF00012.15 gi|452209962|ref|YP_007490076.1| - 4.4e-177 589.6 3.8 1.8e-174 581.0 2.6 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.8 gi|452209962|ref|YP_007490076.1| - 6e-14 51.3 0.6 1.1e-13 50.5 0.4 1.4 1 0 0 1 1 1 1 MreB/Mbl protein Hydantoinase_A PF01968.13 gi|452209962|ref|YP_007490076.1| - 0.084 11.9 0.5 3.1 6.8 0.1 2.4 1 1 0 2 2 2 0 Hydantoinase/oxoprolinase FtsA PF14450.1 gi|452209962|ref|YP_007490076.1| - 0.11 12.3 4.5 0.83 9.5 1.3 2.9 2 1 0 2 2 2 0 Cell division protein FtsA DnaJ PF00226.26 gi|452209963|ref|YP_007490077.1| - 7.3e-20 70.4 6.3 1.2e-19 69.7 4.4 1.4 1 0 0 1 1 1 1 DnaJ domain DUF169 PF02596.10 gi|452209964|ref|YP_007490078.1| - 4.1e-61 206.1 0.0 5.2e-61 205.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF3721 PF12518.3 gi|452209964|ref|YP_007490078.1| - 0.15 11.6 1.6 2.8 7.6 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function tRNA-synt_2d PF01409.15 gi|452209965|ref|YP_007490079.1| - 4.6e-54 183.2 0.0 9.1e-49 165.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|452209965|ref|YP_007490079.1| - 0.00059 19.4 0.1 0.0032 17.0 0.1 2.1 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) NTNH_C PF08470.5 gi|452209966|ref|YP_007490080.1| - 0.16 11.5 2.1 0.17 11.4 1.5 1.0 1 0 0 1 1 1 0 Nontoxic nonhaemagglutinin C-terminal Translin PF01997.11 gi|452209967|ref|YP_007490081.1| - 4.1e-14 52.6 0.1 4.7e-14 52.4 0.1 1.1 1 0 0 1 1 1 1 Translin family UPF0147 PF03685.8 gi|452209969|ref|YP_007490083.1| - 1.8e-22 78.9 0.4 2e-22 78.8 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) Auto_anti-p27 PF06677.7 gi|452209970|ref|YP_007490084.1| - 1.9e-17 62.7 1.0 3e-17 62.1 0.7 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DMP1 PF07263.6 gi|452209970|ref|YP_007490084.1| - 0.12 11.0 8.3 0.16 10.7 5.7 1.0 1 0 0 1 1 1 0 Dentin matrix protein 1 (DMP1) BHD_2 PF10404.4 gi|452209970|ref|YP_007490084.1| - 0.24 11.7 1.9 0.48 10.7 1.3 1.5 1 0 0 1 1 1 0 Rad4 beta-hairpin domain 2 eIF3g PF12353.3 gi|452209970|ref|YP_007490084.1| - 1.9 8.4 4.8 0.6 10.0 0.7 2.0 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G ERCC4 PF02732.10 gi|452209972|ref|YP_007490086.1| - 1.6e-25 89.5 0.0 4.9e-25 87.9 0.0 1.9 1 0 0 1 1 1 1 ERCC4 domain Helicase_C PF00271.26 gi|452209972|ref|YP_007490086.1| - 1.6e-19 69.4 0.1 1.3e-18 66.5 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|452209972|ref|YP_007490086.1| - 2.7e-19 69.2 0.0 1.3e-18 67.0 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|452209972|ref|YP_007490086.1| - 1.9e-14 53.9 0.7 2.4e-13 50.3 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.1 gi|452209972|ref|YP_007490086.1| - 1e-13 51.2 0.0 1.3e-12 47.6 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|452209972|ref|YP_007490086.1| - 4.6e-12 45.6 0.0 1.6e-11 43.9 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.18 gi|452209972|ref|YP_007490086.1| - 1.1e-06 27.9 0.1 1.9e-05 24.1 0.1 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.15 gi|452209972|ref|YP_007490086.1| - 0.00015 21.9 0.8 0.0021 18.2 0.0 3.1 2 1 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold SNF2_N PF00176.18 gi|452209972|ref|YP_007490086.1| - 0.00088 18.1 0.0 0.0016 17.2 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain HHH_8 PF14716.1 gi|452209972|ref|YP_007490086.1| - 0.00092 19.3 0.2 0.0043 17.1 0.1 2.4 1 1 1 2 2 2 1 Helix-hairpin-helix domain HHH_3 PF12836.2 gi|452209972|ref|YP_007490086.1| - 0.0016 18.3 0.1 0.021 14.7 0.1 3.0 3 1 0 3 3 3 1 Helix-hairpin-helix motif DUF1870 PF08965.5 gi|452209972|ref|YP_007490086.1| - 0.012 15.2 0.0 0.035 13.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1870) tRNA-synt_2b PF00587.20 gi|452209974|ref|YP_007490088.1| - 5.8e-58 195.2 0.2 9e-58 194.6 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|452209974|ref|YP_007490088.1| - 3.4e-22 78.1 0.5 6.7e-21 74.0 0.0 2.8 2 0 0 2 2 2 1 Anticodon binding domain Zn-ribbon_8 PF09723.5 gi|452209974|ref|YP_007490088.1| - 0.054 13.4 2.7 4.3 7.3 0.1 2.7 2 0 0 2 2 2 0 Zinc ribbon domain Abi PF02517.11 gi|452209975|ref|YP_007490089.1| - 1e-09 38.3 21.2 3.5e-08 33.4 12.4 3.1 2 1 0 2 2 2 2 CAAX protease self-immunity FliG_M PF14841.1 gi|452209977|ref|YP_007490091.1| - 0.13 12.3 0.1 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 FliG middle domain Grp1_Fun34_YaaH PF01184.14 gi|452209978|ref|YP_007490092.1| - 1.8e-42 144.9 21.7 2.2e-42 144.7 15.0 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family FixP_N PF14715.1 gi|452209978|ref|YP_007490092.1| - 2.8 7.3 0.0 2.8 7.3 0.0 3.6 4 0 0 4 4 4 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SurE PF01975.12 gi|452209979|ref|YP_007490093.1| - 1.7e-55 187.4 0.0 2e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Survival protein SurE Radical_SAM PF04055.16 gi|452209981|ref|YP_007490095.1| - 5.9e-33 114.3 0.8 7.2e-32 110.8 0.1 2.2 2 1 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.8 gi|452209981|ref|YP_007490095.1| - 1.8e-25 89.0 0.0 2.8e-25 88.4 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.1 gi|452209981|ref|YP_007490095.1| - 1e-07 32.1 0.2 2.2e-07 31.1 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452209981|ref|YP_007490095.1| - 5.5e-07 29.6 0.6 1.1e-06 28.6 0.4 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain CdhD PF03599.11 gi|452209981|ref|YP_007490095.1| - 0.028 12.9 0.0 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit GATase_3 PF07685.9 gi|452209982|ref|YP_007490096.1| - 4.8e-30 104.2 0.0 7.2e-30 103.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|452209982|ref|YP_007490096.1| - 7.9e-25 87.4 0.0 1.4e-24 86.6 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|452209982|ref|YP_007490096.1| - 2.8e-20 72.7 2.6 1.6e-17 63.8 1.8 2.2 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|452209982|ref|YP_007490096.1| - 0.028 14.1 0.1 0.85 9.3 0.1 2.3 2 0 0 2 2 2 0 NTPase CTP_synth_N PF06418.9 gi|452209982|ref|YP_007490096.1| - 0.061 12.4 0.2 0.18 10.8 0.0 1.8 2 0 0 2 2 2 0 CTP synthase N-terminus DUF1611 PF07755.6 gi|452209982|ref|YP_007490096.1| - 0.12 11.0 0.1 0.35 9.4 0.0 1.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1611) MobB PF03205.9 gi|452209982|ref|YP_007490096.1| - 0.12 12.1 0.2 0.42 10.3 0.1 1.9 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.13 gi|452209982|ref|YP_007490096.1| - 0.13 11.7 0.2 15 5.0 0.0 2.4 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family Glyoxalase_2 PF12681.2 gi|452209983|ref|YP_007490097.1| - 8.2e-10 39.2 0.0 3.2e-09 37.3 0.0 1.7 2 0 0 2 2 2 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|452209983|ref|YP_007490097.1| - 0.00076 19.4 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCNA_N PF00705.13 gi|452209984|ref|YP_007490098.1| - 7.2e-13 48.1 0.5 1.5e-12 47.0 0.1 1.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|452209984|ref|YP_007490098.1| - 1.3e-10 41.2 0.0 4.5e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.8 gi|452209984|ref|YP_007490098.1| - 3.2e-05 23.2 0.0 0.0003 19.9 0.0 2.0 2 0 0 2 2 2 1 Rad9 DNA_pol3_beta_3 PF02768.10 gi|452209984|ref|YP_007490098.1| - 0.46 10.0 1.7 3.5 7.2 0.3 2.7 2 2 0 2 2 2 0 DNA polymerase III beta subunit, C-terminal domain TFIIS_C PF01096.13 gi|452209985|ref|YP_007490099.1| - 1e-18 66.6 3.8 1e-18 66.6 2.6 2.1 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.2 gi|452209985|ref|YP_007490099.1| - 2e-06 27.5 2.4 0.00016 21.4 0.5 2.2 2 0 0 2 2 2 1 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|452209985|ref|YP_007490099.1| - 6.9e-05 22.0 4.2 0.016 14.5 0.9 2.7 2 1 0 2 2 2 2 TFIIB zinc-binding UPF0547 PF10571.4 gi|452209985|ref|YP_007490099.1| - 0.00046 19.8 3.6 0.26 10.9 0.0 3.1 3 0 0 3 3 3 1 Uncharacterised protein family UPF0547 Ogr_Delta PF04606.7 gi|452209985|ref|YP_007490099.1| - 0.00049 19.6 4.6 0.0012 18.4 0.5 2.2 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger DUF2387 PF09526.5 gi|452209985|ref|YP_007490099.1| - 0.00062 19.6 0.9 0.0022 17.8 0.1 2.0 2 0 0 2 2 2 1 Probable metal-binding protein (DUF2387) DZR PF12773.2 gi|452209985|ref|YP_007490099.1| - 0.00069 19.3 4.8 0.077 12.8 3.3 2.2 1 1 0 1 1 1 1 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|452209985|ref|YP_007490099.1| - 0.00075 19.1 10.5 0.048 13.3 0.0 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.1 gi|452209985|ref|YP_007490099.1| - 0.00091 18.3 6.7 0.55 9.5 0.2 3.1 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|452209985|ref|YP_007490099.1| - 0.001 18.5 5.8 0.22 11.1 0.3 3.3 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|452209985|ref|YP_007490099.1| - 0.0012 18.2 9.2 1.3 8.6 0.3 3.5 3 0 0 3 3 3 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|452209985|ref|YP_007490099.1| - 0.0023 17.5 7.2 0.0037 16.9 1.4 2.5 1 1 1 2 2 2 1 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|452209985|ref|YP_007490099.1| - 0.0024 17.3 5.7 0.58 9.6 0.1 3.2 3 0 0 3 3 3 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_4 PF13717.1 gi|452209985|ref|YP_007490099.1| - 0.0026 17.4 7.1 0.25 11.0 0.4 3.3 3 0 0 3 3 3 1 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|452209985|ref|YP_007490099.1| - 0.0029 17.5 8.8 1.9 8.4 0.1 3.3 3 0 0 3 3 3 1 Zinc ribbon domain zf-ISL3 PF14690.1 gi|452209985|ref|YP_007490099.1| - 0.0072 16.3 1.7 8.4 6.5 0.0 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF3797 PF12677.2 gi|452209985|ref|YP_007490099.1| - 0.0077 15.8 4.6 0.14 11.8 0.1 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF3797) HypA PF01155.14 gi|452209985|ref|YP_007490099.1| - 0.0081 15.8 3.6 0.046 13.4 0.3 2.3 1 1 1 2 2 2 1 Hydrogenase expression/synthesis hypA family Nudix_N_2 PF14803.1 gi|452209985|ref|YP_007490099.1| - 0.0083 15.7 3.9 2.4 7.9 0.7 3.0 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_S27e PF01667.12 gi|452209985|ref|YP_007490099.1| - 0.0091 15.5 1.1 2.6 7.6 0.0 3.0 3 0 0 3 3 3 0 Ribosomal protein S27 YhfH PF14149.1 gi|452209985|ref|YP_007490099.1| - 0.0098 15.6 4.0 9.4 6.1 0.1 3.2 3 0 0 3 3 3 0 YhfH-like protein Lar_restr_allev PF14354.1 gi|452209985|ref|YP_007490099.1| - 0.013 15.7 3.7 0.09 13.0 0.5 2.2 1 1 0 2 2 2 0 Restriction alleviation protein Lar zf-H2C2_2 PF13465.1 gi|452209985|ref|YP_007490099.1| - 0.033 14.5 8.4 1.6 9.1 0.4 3.2 3 0 0 3 3 3 0 Zinc-finger double domain GFA PF04828.9 gi|452209985|ref|YP_007490099.1| - 0.041 13.8 6.2 0.44 10.5 0.9 2.8 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme ArfGap PF01412.13 gi|452209985|ref|YP_007490099.1| - 0.074 12.8 1.7 0.46 10.2 0.3 2.2 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf zf-LITAF-like PF10601.4 gi|452209985|ref|YP_007490099.1| - 0.079 12.8 1.7 15 5.5 0.0 2.8 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain PolC_DP2 PF03833.8 gi|452209985|ref|YP_007490099.1| - 0.088 10.4 1.0 0.087 10.4 0.7 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 C1_1 PF00130.17 gi|452209985|ref|YP_007490099.1| - 0.089 12.5 1.1 2.1 8.1 0.1 2.3 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Terminase_GpA PF05876.7 gi|452209985|ref|YP_007490099.1| - 0.091 11.0 5.6 0.068 11.5 1.4 2.0 1 1 0 2 2 2 0 Phage terminase large subunit (GpA) IBR PF01485.16 gi|452209985|ref|YP_007490099.1| - 0.12 12.2 4.5 2.4 8.1 1.0 2.5 2 1 0 2 2 2 0 IBR domain zf-C2H2_4 PF13894.1 gi|452209985|ref|YP_007490099.1| - 0.12 12.7 3.3 20 5.8 0.0 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger FdhE PF04216.7 gi|452209985|ref|YP_007490099.1| - 0.14 11.8 3.1 0.11 12.1 0.7 1.6 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation Prok-RING_1 PF14446.1 gi|452209985|ref|YP_007490099.1| - 0.14 11.9 4.3 15 5.4 0.1 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-DNA_Pol PF08996.5 gi|452209985|ref|YP_007490099.1| - 0.14 11.4 2.0 0.28 10.5 0.2 1.9 1 1 1 2 2 2 0 DNA Polymerase alpha zinc finger zf-RING_4 PF14570.1 gi|452209985|ref|YP_007490099.1| - 0.18 11.3 5.2 1.6 8.3 0.1 2.7 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain A2L_zn_ribbon PF08792.5 gi|452209985|ref|YP_007490099.1| - 0.34 10.4 8.8 1.2 8.7 0.0 3.2 3 0 0 3 3 3 0 A2L zinc ribbon domain zf-C2H2 PF00096.21 gi|452209985|ref|YP_007490099.1| - 0.43 11.0 6.2 35 4.9 0.5 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type Baculo_LEF5_C PF11792.3 gi|452209985|ref|YP_007490099.1| - 0.46 9.9 0.1 0.46 9.9 0.1 2.7 4 0 0 4 4 2 0 Baculoviridae late expression factor 5 C-terminal domain TerY-C PF15616.1 gi|452209985|ref|YP_007490099.1| - 0.47 10.3 4.0 2.9 7.8 0.9 2.2 1 1 1 2 2 2 0 TerY-C metal binding domain GCC2_GCC3 PF07699.8 gi|452209985|ref|YP_007490099.1| - 0.53 9.8 5.9 2.3 7.8 1.3 2.5 2 1 0 2 2 2 0 GCC2 and GCC3 C1_4 PF07975.7 gi|452209985|ref|YP_007490099.1| - 0.53 10.3 4.3 17 5.5 0.0 2.9 2 1 1 3 3 3 0 TFIIH C1-like domain Zn_Tnp_IS91 PF14319.1 gi|452209985|ref|YP_007490099.1| - 0.57 9.7 5.9 0.65 9.5 0.9 2.6 2 1 1 3 3 3 0 Transposase zinc-binding domain zf-C4_Topoisom PF01396.14 gi|452209985|ref|YP_007490099.1| - 0.61 9.6 6.7 1.4 8.5 0.6 3.0 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger FYVE PF01363.16 gi|452209985|ref|YP_007490099.1| - 0.79 9.6 6.3 6 6.8 4.3 2.2 1 1 0 1 1 1 0 FYVE zinc finger zf-HIT PF04438.11 gi|452209985|ref|YP_007490099.1| - 1.5 8.5 11.4 0.9 9.2 0.2 3.1 3 0 0 3 3 3 0 HIT zinc finger Rep_fac-A_C PF08646.5 gi|452209985|ref|YP_007490099.1| - 2.1 8.0 4.8 1.2 8.8 0.0 2.3 1 1 1 2 2 2 0 Replication factor-A C terminal domain Ribosomal_S27 PF01599.14 gi|452209985|ref|YP_007490099.1| - 2.3 8.1 6.6 49 3.8 0.2 3.1 3 0 0 3 3 3 0 Ribosomal protein S27a RRN7 PF11781.3 gi|452209985|ref|YP_007490099.1| - 2.3 7.7 8.6 14 5.3 0.1 3.1 3 0 0 3 3 3 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-TFIIB PF13453.1 gi|452209985|ref|YP_007490099.1| - 2.4 7.4 7.2 1.1 8.5 2.1 2.3 2 1 0 2 2 2 0 Transcription factor zinc-finger zf-dskA_traR PF01258.12 gi|452209985|ref|YP_007490099.1| - 2.8 7.7 5.3 11 5.8 0.1 2.8 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger DUF2082 PF09855.4 gi|452209985|ref|YP_007490099.1| - 3.2 7.6 10.1 42 4.0 0.1 3.1 2 1 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-AN1 PF01428.11 gi|452209985|ref|YP_007490099.1| - 3.3 7.6 8.0 27 4.7 0.1 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-FPG_IleRS PF06827.9 gi|452209985|ref|YP_007490099.1| - 4.4 7.0 6.6 23 4.7 0.4 2.9 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS zf-tcix PF14952.1 gi|452209985|ref|YP_007490099.1| - 4.8 6.5 11.4 3.9 6.8 0.9 3.0 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding Auto_anti-p27 PF06677.7 gi|452209985|ref|YP_007490099.1| - 5.5 6.8 8.7 9.5 6.0 0.1 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) C1_2 PF03107.11 gi|452209985|ref|YP_007490099.1| - 7.2 6.8 8.2 8.5 6.5 0.3 2.6 3 0 0 3 3 2 0 C1 domain zf-C2H2_3 PF13878.1 gi|452209985|ref|YP_007490099.1| - 7.5 6.2 6.8 69 3.1 0.1 3.1 3 0 0 3 3 3 0 zinc-finger of acetyl-transferase ESCO DUF35_N PF12172.3 gi|452209985|ref|YP_007490099.1| - 9.6 6.2 6.4 56 3.8 0.1 3.1 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Orthopox_F7 PF05813.7 gi|452209986|ref|YP_007490100.1| - 0.11 12.3 0.1 0.18 11.7 0.0 1.4 1 1 0 1 1 1 0 Orthopoxvirus F7 protein Exosortase_EpsH PF09721.5 gi|452209987|ref|YP_007490101.1| - 1.2e-57 195.1 20.0 1.4e-57 194.8 13.9 1.0 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) PS_Dcarbxylase PF02666.10 gi|452209988|ref|YP_007490102.1| - 6.2e-32 110.5 1.8 4.6e-26 91.3 0.2 2.0 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase RnfC_N PF13375.1 gi|452209988|ref|YP_007490102.1| - 0.00059 19.5 0.6 2.5 7.8 0.0 3.8 1 1 3 4 4 4 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.17 gi|452209988|ref|YP_007490102.1| - 0.021 14.8 0.6 4.2 7.5 0.1 3.1 1 1 1 3 3 3 0 Peptidase family M23 HlyD_3 PF13437.1 gi|452209988|ref|YP_007490102.1| - 0.1 12.9 0.7 2.6 8.4 0.0 3.0 3 1 1 4 4 4 0 HlyD family secretion protein CDP-OH_P_transf PF01066.16 gi|452209989|ref|YP_007490103.1| - 2.2e-13 50.3 7.2 2.2e-13 50.3 5.0 2.7 1 1 1 2 2 2 1 CDP-alcohol phosphatidyltransferase Chitin_synth_2 PF03142.10 gi|452209989|ref|YP_007490103.1| - 0.39 9.0 4.0 0.51 8.6 2.8 1.1 1 0 0 1 1 1 0 Chitin synthase DUF381 PF04038.7 gi|452209990|ref|YP_007490104.1| - 1.7e-28 98.4 0.7 2.3e-28 97.9 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF381) DUF372 PF04036.7 gi|452209990|ref|YP_007490104.1| - 1e-22 79.3 0.0 1.4e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF372) Aminotran_1_2 PF00155.16 gi|452209991|ref|YP_007490105.1| - 7.2e-63 212.7 0.0 8.2e-63 212.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|452209991|ref|YP_007490105.1| - 4.6e-12 45.6 0.0 6.4e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|452209991|ref|YP_007490105.1| - 2.3e-07 29.9 0.0 8.7e-07 28.0 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.8 gi|452209991|ref|YP_007490105.1| - 0.00038 19.2 0.0 0.00067 18.4 0.0 1.3 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.15 gi|452209991|ref|YP_007490105.1| - 0.00041 18.7 0.0 0.00065 18.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Hexapep PF00132.19 gi|452209992|ref|YP_007490106.1| - 2.8e-07 29.7 11.4 9.3e-06 24.9 0.0 4.9 4 1 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.8 gi|452209992|ref|YP_007490106.1| - 5.2e-06 26.4 11.3 4.7e-05 23.3 2.7 3.1 2 2 0 2 2 2 2 Polymer-forming cytoskeletal TGT_C2 PF14810.1 gi|452209994|ref|YP_007490108.1| - 1.6e-30 104.7 0.1 2.9e-30 103.9 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|452209994|ref|YP_007490108.1| - 2.3e-16 59.2 0.1 5.1e-16 58.1 0.0 1.6 1 0 0 1 1 1 1 PUA domain RHH_1 PF01402.16 gi|452209995|ref|YP_007490109.1| - 0.022 14.6 0.1 0.078 12.8 0.1 2.0 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family DUF1894 PF08979.6 gi|452209999|ref|YP_007490113.1| - 1.2e-31 108.5 0.1 1.5e-31 108.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.6 gi|452210000|ref|YP_007490114.1| - 3.4e-59 198.8 0.3 3.9e-59 198.6 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) B12-binding PF02310.14 gi|452210000|ref|YP_007490114.1| - 0.0033 17.3 0.0 0.0049 16.7 0.0 1.3 1 1 0 1 1 1 1 B12 binding domain DUF2870 PF11069.3 gi|452210000|ref|YP_007490114.1| - 0.0081 16.1 0.0 0.023 14.7 0.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF2870) DUF1894 PF08979.6 gi|452210001|ref|YP_007490115.1| - 3.2e-37 126.4 0.2 3.8e-37 126.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) AIRS_C PF02769.17 gi|452210002|ref|YP_007490116.1| - 2.6e-17 63.2 0.0 4.7e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|452210002|ref|YP_007490116.1| - 9.2e-16 57.8 0.2 1.7e-15 56.9 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain S4 PF01479.20 gi|452210002|ref|YP_007490116.1| - 0.022 14.2 0.3 0.049 13.0 0.2 1.6 1 0 0 1 1 1 0 S4 domain AA_kinase PF00696.23 gi|452210003|ref|YP_007490117.1| - 6.6e-53 179.7 0.8 1.2e-52 178.9 0.1 1.7 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.1 gi|452210003|ref|YP_007490117.1| - 6.8e-26 89.5 3.6 8.3e-13 47.6 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.20 gi|452210003|ref|YP_007490117.1| - 1.5e-24 85.0 0.6 1.1e-11 43.9 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.1 gi|452210003|ref|YP_007490117.1| - 0.00022 20.8 2.6 0.025 14.3 0.0 3.6 3 0 0 3 3 3 1 ACT domain PPK2 PF03976.9 gi|452210003|ref|YP_007490117.1| - 0.014 14.7 0.2 3.1 7.0 0.0 2.4 1 1 1 2 2 2 0 Polyphosphate kinase 2 (PPK2) HAD_2 PF13419.1 gi|452210003|ref|YP_007490117.1| - 0.12 12.5 0.0 29 4.8 0.0 3.2 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase PhosphMutase PF10143.4 gi|452210004|ref|YP_007490118.1| - 3.1e-57 192.9 0.0 5.5e-57 192.1 0.0 1.4 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|452210004|ref|YP_007490118.1| - 7e-46 156.6 0.0 7.9e-46 156.4 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.15 gi|452210004|ref|YP_007490118.1| - 0.028 13.0 0.1 0.15 10.7 0.0 1.8 2 0 0 2 2 2 0 Alkaline phosphatase HSP20 PF00011.16 gi|452210006|ref|YP_007490120.1| - 7.8e-22 77.0 0.7 1e-21 76.7 0.5 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|452210006|ref|YP_007490120.1| - 0.00046 20.6 0.0 0.0042 17.5 0.0 2.1 1 1 0 1 1 1 1 CS domain F420_ligase PF01996.11 gi|452210007|ref|YP_007490121.1| - 1.5e-66 223.7 0.1 1.8e-66 223.4 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase ScdA_N PF04405.9 gi|452210007|ref|YP_007490121.1| - 0.024 14.0 0.0 0.1 11.9 0.0 2.0 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) Cupin_2 PF07883.6 gi|452210008|ref|YP_007490122.1| - 3.2e-08 32.9 0.0 4.5e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.7 gi|452210008|ref|YP_007490122.1| - 0.0019 17.7 0.1 0.0023 17.4 0.1 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding PF02311.14 gi|452210008|ref|YP_007490122.1| - 0.04 13.6 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_6 PF12852.2 gi|452210008|ref|YP_007490122.1| - 0.06 12.9 0.0 0.071 12.7 0.0 1.1 1 0 0 1 1 1 0 Cupin DUF1255 PF06865.6 gi|452210008|ref|YP_007490122.1| - 0.09 13.0 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1255) Cupin_1 PF00190.17 gi|452210008|ref|YP_007490122.1| - 0.11 11.8 0.0 0.2 11.0 0.0 1.6 1 1 0 1 1 1 0 Cupin dCMP_cyt_deam_1 PF00383.17 gi|452210009|ref|YP_007490123.1| - 2.5e-29 100.8 1.4 3.2e-29 100.5 1.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region XOO_2897-deam PF14440.1 gi|452210009|ref|YP_007490123.1| - 6e-05 22.7 0.1 6.5e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Xanthomonas XOO_2897-like deaminase APOBEC_N PF08210.6 gi|452210009|ref|YP_007490123.1| - 0.00019 21.0 1.4 0.00031 20.4 1.0 1.3 1 0 0 1 1 1 1 APOBEC-like N-terminal domain Bd3614-deam PF14439.1 gi|452210009|ref|YP_007490123.1| - 0.0011 18.7 0.6 0.0026 17.6 0.2 1.6 1 1 1 2 2 2 1 Bd3614-like deaminase MafB19-deam PF14437.1 gi|452210009|ref|YP_007490123.1| - 0.017 14.7 0.9 0.024 14.2 0.6 1.2 1 0 0 1 1 1 0 MafB19-like deaminase zf-C3HC4 PF00097.20 gi|452210009|ref|YP_007490123.1| - 0.068 12.8 3.6 0.2 11.3 2.5 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SecD_SecF PF02355.11 gi|452210010|ref|YP_007490124.1| - 8.9e-38 129.3 13.5 1.5e-37 128.6 9.4 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|452210010|ref|YP_007490124.1| - 1.8e-05 23.7 0.1 5.4e-05 22.1 0.0 1.9 2 0 0 2 2 2 1 SecD/SecF GG Motif Patched PF02460.13 gi|452210010|ref|YP_007490124.1| - 0.28 9.0 15.5 0.42 8.4 10.8 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.11 gi|452210011|ref|YP_007490125.1| - 6.2e-14 51.6 7.8 1.1e-13 50.8 5.4 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|452210011|ref|YP_007490125.1| - 0.00013 20.9 0.5 0.00041 19.4 0.3 1.9 1 0 0 1 1 1 1 SecD/SecF GG Motif DNA_pol3_delta2 PF13177.1 gi|452210012|ref|YP_007490126.1| - 7.3e-17 61.4 0.0 9.9e-17 61.0 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.6 gi|452210012|ref|YP_007490126.1| - 7.7e-16 57.8 0.1 2.2e-15 56.3 0.0 1.8 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA PF00004.24 gi|452210012|ref|YP_007490126.1| - 8.9e-11 42.1 0.0 1.9e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|452210012|ref|YP_007490126.1| - 5.6e-08 32.9 0.0 2.9e-07 30.6 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|452210012|ref|YP_007490126.1| - 4.1e-06 26.7 0.1 1.5e-05 24.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452210012|ref|YP_007490126.1| - 0.00022 21.9 0.0 0.0007 20.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|452210012|ref|YP_007490126.1| - 0.00059 19.2 0.0 0.0024 17.2 0.0 2.0 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.7 gi|452210012|ref|YP_007490126.1| - 0.001 18.1 0.0 0.14 11.1 0.0 2.7 2 1 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus Rad17 PF03215.10 gi|452210012|ref|YP_007490126.1| - 0.0011 17.7 0.0 0.083 11.5 0.0 2.1 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein DNA_pol3_delta PF06144.8 gi|452210012|ref|YP_007490126.1| - 0.0026 17.2 0.0 0.014 14.8 0.0 2.1 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Arch_ATPase PF01637.13 gi|452210012|ref|YP_007490126.1| - 0.004 16.8 0.0 0.0082 15.8 0.0 1.6 1 1 0 1 1 1 1 Archaeal ATPase TIP49 PF06068.8 gi|452210012|ref|YP_007490126.1| - 0.0075 15.0 0.0 0.014 14.0 0.0 1.4 1 0 0 1 1 1 1 TIP49 C-terminus AAA_16 PF13191.1 gi|452210012|ref|YP_007490126.1| - 0.012 15.6 0.0 0.046 13.7 0.0 2.3 1 1 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.17 gi|452210012|ref|YP_007490126.1| - 0.03 14.4 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.1 gi|452210012|ref|YP_007490126.1| - 0.039 14.0 0.0 0.22 11.5 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_33 PF13671.1 gi|452210012|ref|YP_007490126.1| - 0.081 12.7 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|452210012|ref|YP_007490126.1| - 0.089 13.0 0.0 0.24 11.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain UPF0228 PF05727.6 gi|452210014|ref|YP_007490128.1| - 1e-52 177.1 4.3 1.5e-52 176.7 3.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) HTH_19 PF12844.2 gi|452210014|ref|YP_007490128.1| - 0.0066 16.4 0.2 0.031 14.3 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain DUF4373 PF14297.1 gi|452210014|ref|YP_007490128.1| - 0.0077 16.4 0.1 1.5 9.1 0.0 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4373) Ofd1_CTDD PF10637.4 gi|452210014|ref|YP_007490128.1| - 0.061 12.4 0.3 0.078 12.0 0.2 1.2 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term DDE_Tnp_1 PF01609.16 gi|452210015|ref|YP_007490129.1| - 2.9e-05 23.7 5.4 9e-05 22.1 3.8 1.7 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.1 gi|452210015|ref|YP_007490129.1| - 0.0082 16.1 2.6 0.01 15.8 1.8 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.1 gi|452210015|ref|YP_007490129.1| - 0.033 14.3 3.9 0.052 13.7 2.7 1.4 1 1 0 1 1 1 0 Transposase DDE domain DUF4309 PF14172.1 gi|452210015|ref|YP_007490129.1| - 0.046 13.7 0.4 0.064 13.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Cytochrom_C_asm PF01578.15 gi|452210018|ref|YP_007490132.1| - 0.054 13.0 1.3 0.07 12.6 0.9 1.2 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF3671 PF12420.3 gi|452210018|ref|YP_007490132.1| - 0.24 11.4 1.9 0.29 11.1 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function SUR7 PF06687.7 gi|452210018|ref|YP_007490132.1| - 0.88 9.0 4.7 1 8.9 3.3 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF4282 PF14110.1 gi|452210018|ref|YP_007490132.1| - 1.9 8.7 7.2 2.6 8.3 5.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) ATG22 PF11700.3 gi|452210019|ref|YP_007490133.1| - 0.036 12.5 0.6 0.039 12.4 0.4 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like DUF2207 PF09972.4 gi|452210019|ref|YP_007490133.1| - 0.21 10.1 0.7 0.21 10.1 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AA_permease PF00324.16 gi|452210020|ref|YP_007490134.1| - 1.5e-40 138.9 46.6 2e-40 138.5 32.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|452210020|ref|YP_007490134.1| - 1.2e-24 86.7 44.8 2e-24 85.9 30.4 1.6 1 1 1 2 2 2 1 Amino acid permease Herpes_LMP1 PF05297.6 gi|452210020|ref|YP_007490134.1| - 0.001 18.0 3.5 0.001 18.0 2.4 2.9 3 0 0 3 3 3 1 Herpesvirus latent membrane protein 1 (LMP1) Peptidase_M50 PF02163.17 gi|452210020|ref|YP_007490134.1| - 0.17 10.7 2.3 8.9 5.2 0.1 3.2 1 1 1 2 2 2 0 Peptidase family M50 B12-binding_2 PF02607.12 gi|452210022|ref|YP_007490136.1| - 1.8e-20 72.7 0.0 2.2e-20 72.4 0.0 1.1 1 0 0 1 1 1 1 B12 binding domain Rep_fac_C PF08542.6 gi|452210022|ref|YP_007490136.1| - 0.012 15.5 0.1 0.016 15.1 0.0 1.4 1 1 0 1 1 1 0 Replication factor C C-terminal domain RsbU_N PF08673.5 gi|452210022|ref|YP_007490136.1| - 0.015 15.2 0.0 0.023 14.6 0.0 1.4 1 1 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain YbaB_DNA_bd PF02575.11 gi|452210022|ref|YP_007490136.1| - 0.12 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family URO-D PF01208.12 gi|452210024|ref|YP_007490138.1| - 5e-69 232.8 0.1 5.6e-69 232.6 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF4445 PF14574.1 gi|452210025|ref|YP_007490139.1| - 4.6e-111 370.9 1.6 6.8e-111 370.4 1.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4 PF00037.22 gi|452210025|ref|YP_007490139.1| - 2.6e-10 39.4 9.6 1.2e-05 24.7 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452210025|ref|YP_007490139.1| - 4e-09 35.9 11.2 3.1e-06 26.7 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452210025|ref|YP_007490139.1| - 5.3e-09 36.3 11.4 9.6e-09 35.5 7.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210025|ref|YP_007490139.1| - 3.3e-08 33.2 10.8 6.1e-08 32.4 7.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210025|ref|YP_007490139.1| - 6.3e-08 32.3 9.9 1.4e-07 31.2 6.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210025|ref|YP_007490139.1| - 1.7e-07 31.4 12.1 3e-07 30.5 8.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210025|ref|YP_007490139.1| - 1.5e-06 27.7 12.6 0.00074 19.2 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210025|ref|YP_007490139.1| - 3.5e-06 27.6 12.3 0.00026 21.6 8.7 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|452210025|ref|YP_007490139.1| - 8e-05 22.5 11.1 0.00015 21.6 7.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452210025|ref|YP_007490139.1| - 0.0016 18.6 13.4 0.02 15.1 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452210025|ref|YP_007490139.1| - 0.006 17.0 14.9 0.19 12.3 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452210025|ref|YP_007490139.1| - 0.092 12.6 5.2 0.17 11.8 3.6 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452210025|ref|YP_007490139.1| - 0.18 12.2 12.9 0.41 11.0 1.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452210025|ref|YP_007490139.1| - 1 9.7 15.2 1.6 9.1 3.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210025|ref|YP_007490139.1| - 2.1 8.9 9.8 8.9 6.9 6.8 2.1 1 1 0 1 1 1 0 4Fe-4S single cluster domain Pyrophosphatase PF00719.14 gi|452210026|ref|YP_007490140.1| - 1.3e-58 196.8 0.1 1.5e-58 196.6 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase NAD_binding_2 PF03446.10 gi|452210027|ref|YP_007490141.1| - 0.0008 19.2 0.0 0.0022 17.8 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|452210027|ref|YP_007490141.1| - 0.086 12.2 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|452210027|ref|YP_007490141.1| - 0.13 11.9 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mur_ligase PF01225.20 gi|452210027|ref|YP_007490141.1| - 0.14 12.2 0.1 10 6.2 0.0 2.4 1 1 1 2 2 2 0 Mur ligase family, catalytic domain ATP-grasp_4 PF13535.1 gi|452210028|ref|YP_007490142.1| - 4.3e-12 46.1 0.0 1e-11 44.9 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|452210028|ref|YP_007490142.1| - 1.5e-08 34.6 0.0 2.8e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|452210028|ref|YP_007490142.1| - 0.0027 17.1 0.0 0.0055 16.1 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Pyr_redox PF00070.22 gi|452210028|ref|YP_007490142.1| - 0.053 13.9 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|452210028|ref|YP_007490142.1| - 0.09 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|452210028|ref|YP_007490142.1| - 0.15 12.1 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Radical_SAM PF04055.16 gi|452210029|ref|YP_007490143.1| - 1.4e-09 38.3 0.4 5.8e-09 36.3 0.1 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452210029|ref|YP_007490143.1| - 1.1e-05 25.6 0.2 1.9e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain BATS PF06968.8 gi|452210029|ref|YP_007490143.1| - 0.0027 17.5 0.1 0.024 14.4 0.0 2.4 3 0 0 3 3 3 1 Biotin and Thiamin Synthesis associated domain Fer4_14 PF13394.1 gi|452210029|ref|YP_007490143.1| - 0.0045 17.0 0.2 0.0074 16.2 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Prenyltrans_2 PF13249.1 gi|452210030|ref|YP_007490144.1| - 4.5e-08 33.4 2.9 0.019 15.3 0.0 4.0 2 1 0 2 2 2 2 Prenyltransferase-like Prenyltrans_1 PF13243.1 gi|452210030|ref|YP_007490144.1| - 4.1e-05 23.5 1.7 0.02 14.9 0.4 3.0 1 1 1 2 2 2 2 Prenyltransferase-like Prenyltrans PF00432.16 gi|452210030|ref|YP_007490144.1| - 0.032 13.7 6.4 2.6 7.6 1.3 4.6 3 1 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat A2M_comp PF07678.9 gi|452210030|ref|YP_007490144.1| - 0.09 11.9 0.1 7.8 5.6 0.0 3.2 2 1 1 4 4 4 0 A-macroglobulin complement component DUF134 PF02001.11 gi|452210031|ref|YP_007490145.1| - 4.1e-11 42.6 0.4 7.4e-11 41.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function DUF134 Sigma70_r4 PF04545.11 gi|452210031|ref|YP_007490145.1| - 0.062 12.6 0.1 0.11 11.8 0.1 1.5 1 1 0 1 1 1 0 Sigma-70, region 4 zf-C4_Topoisom PF01396.14 gi|452210031|ref|YP_007490145.1| - 0.08 12.4 0.8 0.08 12.4 0.6 2.6 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Sigma70_r4_2 PF08281.7 gi|452210031|ref|YP_007490145.1| - 0.16 11.4 0.6 0.32 10.4 0.1 1.7 1 1 1 2 2 2 0 Sigma-70, region 4 zf-ribbon_3 PF13248.1 gi|452210031|ref|YP_007490145.1| - 0.23 10.7 8.7 0.45 9.8 6.0 1.5 1 1 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|452210031|ref|YP_007490145.1| - 0.23 10.9 5.2 1.4 8.4 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain Auto_anti-p27 PF06677.7 gi|452210031|ref|YP_007490145.1| - 1.1 9.0 7.7 0.63 9.8 0.3 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) OrfB_Zn_ribbon PF07282.6 gi|452210031|ref|YP_007490145.1| - 3 7.5 5.4 4.9 6.8 3.7 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|452210031|ref|YP_007490145.1| - 5.9 6.9 8.2 24 4.9 5.7 2.0 1 1 0 1 1 1 0 Zinc ribbon domain Radical_SAM PF04055.16 gi|452210032|ref|YP_007490146.1| - 5.3e-12 46.2 0.1 1.2e-11 45.0 0.1 1.6 1 0 0 1 1 1 1 Radical SAM superfamily TrmB PF01978.14 gi|452210032|ref|YP_007490146.1| - 0.057 13.1 0.0 0.17 11.5 0.0 1.9 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Usp PF00582.21 gi|452210033|ref|YP_007490147.1| - 1.2e-18 67.6 0.1 1.5e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|452210034|ref|YP_007490148.1| - 1.1e-37 129.3 0.3 3.3e-37 127.8 0.2 1.6 1 1 1 2 2 2 1 Universal stress protein family Nitro_FeMo-Co PF02579.12 gi|452210034|ref|YP_007490148.1| - 0.053 13.6 0.1 0.13 12.3 0.0 1.6 1 1 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor DNA_photolyase PF00875.13 gi|452210034|ref|YP_007490148.1| - 0.054 13.2 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Usp PF00582.21 gi|452210035|ref|YP_007490149.1| - 5.7e-38 130.2 0.1 6.5e-38 130.0 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Nitro_FeMo-Co PF02579.12 gi|452210035|ref|YP_007490149.1| - 0.085 12.9 0.1 0.38 10.8 0.0 2.0 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor TfuA PF07812.7 gi|452210036|ref|YP_007490150.1| - 5.1e-46 154.9 0.0 1.5e-45 153.5 0.0 1.8 2 0 0 2 2 2 1 TfuA-like protein SHOCT PF09851.4 gi|452210036|ref|YP_007490150.1| - 9.5 5.8 7.3 3.7 7.1 0.7 2.8 3 0 0 3 3 3 0 Short C-terminal domain YcaO PF02624.11 gi|452210037|ref|YP_007490151.1| - 2e-83 280.6 0.0 2.4e-83 280.3 0.0 1.1 1 0 0 1 1 1 1 YcaO-like family DUF2892 PF11127.3 gi|452210038|ref|YP_007490152.1| - 3.1e-15 55.7 0.2 3.9e-15 55.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Kei1 PF08552.6 gi|452210038|ref|YP_007490152.1| - 0.03 13.9 0.3 0.033 13.8 0.2 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 DUF3017 PF11222.3 gi|452210038|ref|YP_007490152.1| - 0.052 13.3 0.6 0.066 13.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3017) DUF4234 PF14018.1 gi|452210038|ref|YP_007490152.1| - 0.18 11.5 0.4 0.18 11.5 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4234) DUF2207 PF09972.4 gi|452210040|ref|YP_007490154.1| - 0.00088 17.9 1.0 0.00088 17.9 0.7 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) UPF0104 PF03706.8 gi|452210040|ref|YP_007490154.1| - 0.0031 16.8 4.6 0.0038 16.5 3.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Tetraspannin PF00335.15 gi|452210040|ref|YP_007490154.1| - 0.45 9.7 6.6 1.1 8.5 1.2 2.1 2 0 0 2 2 2 0 Tetraspanin family E1-E2_ATPase PF00122.15 gi|452210041|ref|YP_007490155.1| - 1.6e-50 171.3 3.9 2.5e-50 170.6 2.7 1.3 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.21 gi|452210041|ref|YP_007490155.1| - 4e-41 141.8 0.3 1.1e-40 140.3 0.0 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|452210041|ref|YP_007490155.1| - 1.2e-15 58.1 0.0 2.5e-15 57.1 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Ail_Lom PF06316.6 gi|452210041|ref|YP_007490155.1| - 0.15 11.5 0.0 0.34 10.3 0.0 1.6 1 0 0 1 1 1 0 Enterobacterial Ail/Lom protein tRNA-synt_2d PF01409.15 gi|452210042|ref|YP_007490156.1| - 6.9e-91 303.8 0.0 9.1e-91 303.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|452210042|ref|YP_007490156.1| - 0.0015 17.3 4.9 0.066 11.9 0.0 3.6 4 1 0 4 4 4 2 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 gi|452210042|ref|YP_007490156.1| - 0.0069 15.9 0.1 0.03 13.9 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) ssDNA-exonuc_C PF10141.4 gi|452210042|ref|YP_007490156.1| - 0.12 11.9 0.0 0.28 10.6 0.0 1.5 1 0 0 1 1 1 0 Single-strand DNA-specific exonuclease, C terminal domain tRNA-synt_1b PF00579.20 gi|452210043|ref|YP_007490157.1| - 3.2e-33 115.1 0.0 2.5e-18 66.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) NTP_transf_2 PF01909.18 gi|452210044|ref|YP_007490158.1| - 0.00087 19.5 1.5 0.0013 19.0 1.1 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF86 PF01934.12 gi|452210045|ref|YP_007490159.1| - 9.4e-30 102.7 0.1 1.1e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Radical_SAM PF04055.16 gi|452210046|ref|YP_007490160.1| - 2.6e-11 43.9 0.0 9.3e-11 42.1 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.1 gi|452210046|ref|YP_007490160.1| - 1.7e-06 28.2 0.0 3.5e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain NAD_binding_2 PF03446.10 gi|452210046|ref|YP_007490160.1| - 0.0023 17.7 0.0 0.005 16.6 0.0 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase eIF-5_eIF-2B PF01873.12 gi|452210048|ref|YP_007490162.1| - 8.6e-40 135.2 0.0 1.2e-39 134.7 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.15 gi|452210048|ref|YP_007490162.1| - 6e-12 45.1 0.8 1.6e-11 43.8 0.5 1.7 1 0 0 1 1 1 1 TRAM domain Zn-ribbon_8 PF09723.5 gi|452210048|ref|YP_007490162.1| - 0.0082 16.0 0.6 0.018 14.9 0.4 1.6 1 0 0 1 1 1 1 Zinc ribbon domain DUF4265 PF14085.1 gi|452210048|ref|YP_007490162.1| - 0.014 15.1 0.0 0.039 13.6 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4265) ZF-HD_dimer PF04770.7 gi|452210048|ref|YP_007490162.1| - 0.033 14.2 0.2 0.058 13.4 0.1 1.5 1 0 0 1 1 1 0 ZF-HD protein dimerisation region NMD3 PF04981.8 gi|452210048|ref|YP_007490162.1| - 0.034 13.2 0.2 0.048 12.7 0.1 1.2 1 0 0 1 1 1 0 NMD3 family zf-ribbon_3 PF13248.1 gi|452210048|ref|YP_007490162.1| - 0.077 12.2 0.3 8.3 5.7 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|452210048|ref|YP_007490162.1| - 0.12 11.8 0.9 9.4 5.8 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.13 gi|452210048|ref|YP_007490162.1| - 0.35 9.9 0.1 0.35 9.9 0.1 1.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Ribosomal_L16 PF00252.13 gi|452210049|ref|YP_007490163.1| - 2.6e-28 98.4 0.2 3e-28 98.2 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF1786 PF08735.5 gi|452210051|ref|YP_007490165.1| - 2.7e-101 338.0 0.0 3.3e-101 337.7 0.0 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) DDR PF08841.5 gi|452210051|ref|YP_007490165.1| - 0.0031 16.4 0.2 0.007 15.2 0.1 1.5 1 0 0 1 1 1 1 Diol dehydratase reactivase ATPase-like domain MoCF_biosynth PF00994.19 gi|452210052|ref|YP_007490166.1| - 3.4e-32 110.8 0.0 4e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain SNF2_N PF00176.18 gi|452210054|ref|YP_007490168.1| - 2e-65 220.5 0.0 2.7e-65 220.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.3 gi|452210054|ref|YP_007490168.1| - 1.7e-42 144.1 0.4 3.8e-42 143.0 0.3 1.6 1 0 0 1 1 1 1 SNF2 Helicase protein Helicase_C PF00271.26 gi|452210054|ref|YP_007490168.1| - 8e-10 38.4 0.0 3.7e-09 36.3 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain MAGE PF01454.14 gi|452210054|ref|YP_007490168.1| - 0.098 11.9 0.0 0.22 10.8 0.0 1.5 1 0 0 1 1 1 0 MAGE family FeoA PF04023.9 gi|452210055|ref|YP_007490169.1| - 0.0018 18.2 0.0 0.0019 18.1 0.0 1.0 1 0 0 1 1 1 1 FeoA domain DUF1724 PF08350.5 gi|452210057|ref|YP_007490171.1| - 4.2e-24 83.8 0.0 8e-24 82.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452210057|ref|YP_007490171.1| - 0.00091 18.8 0.0 0.0015 18.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|452210057|ref|YP_007490171.1| - 0.002 17.7 0.1 0.0041 16.7 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.11 gi|452210057|ref|YP_007490171.1| - 0.0047 16.9 0.8 1.1 9.3 0.0 2.6 2 0 0 2 2 2 2 HemN C-terminal domain CRS1_YhbY PF01985.16 gi|452210059|ref|YP_007490173.1| - 1.4e-25 89.0 2.0 1.6e-25 88.9 1.4 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain CCDC155 PF14662.1 gi|452210059|ref|YP_007490173.1| - 0.043 13.4 0.2 0.046 13.3 0.2 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 tRNA-synt_2c PF01411.14 gi|452210060|ref|YP_007490174.1| - 6.3e-126 420.8 0.0 8e-126 420.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|452210060|ref|YP_007490174.1| - 5e-14 51.9 2.2 1.4e-13 50.4 1.5 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|452210060|ref|YP_007490174.1| - 2.8e-09 36.5 1.9 8.1e-09 35.0 1.3 1.8 1 0 0 1 1 1 1 DHHA1 domain Methyltransf_15 PF09445.5 gi|452210061|ref|YP_007490175.1| - 5.1e-13 48.9 0.1 9.5e-13 48.0 0.0 1.5 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.1 gi|452210061|ref|YP_007490175.1| - 4.4e-11 42.6 0.0 7.8e-11 41.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452210061|ref|YP_007490175.1| - 3.1e-09 36.8 0.0 4.5e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210061|ref|YP_007490175.1| - 8.3e-09 36.0 0.0 1.7e-08 34.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|452210061|ref|YP_007490175.1| - 2.7e-07 29.8 0.0 5.3e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.7 gi|452210061|ref|YP_007490175.1| - 1.3e-05 25.5 0.0 2.5e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210061|ref|YP_007490175.1| - 2.3e-05 24.6 0.0 4.2e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210061|ref|YP_007490175.1| - 3.8e-05 23.1 0.0 5.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain tRNA_U5-meth_tr PF05958.6 gi|452210061|ref|YP_007490175.1| - 0.00021 20.1 0.0 0.00033 19.4 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.11 gi|452210061|ref|YP_007490175.1| - 0.00032 20.3 0.0 0.00052 19.6 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein UPF0020 PF01170.13 gi|452210061|ref|YP_007490175.1| - 0.002 17.7 0.0 0.0036 16.8 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 RrnaAD PF00398.15 gi|452210061|ref|YP_007490175.1| - 0.0034 16.4 0.0 0.0052 15.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.10 gi|452210061|ref|YP_007490175.1| - 0.016 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 FtsJ PF01728.14 gi|452210061|ref|YP_007490175.1| - 0.047 13.6 0.0 0.2 11.6 0.0 2.0 2 0 0 2 2 2 0 FtsJ-like methyltransferase PCMT PF01135.14 gi|452210061|ref|YP_007490175.1| - 0.049 13.1 0.0 0.085 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_30 PF05430.6 gi|452210061|ref|YP_007490175.1| - 0.098 12.3 0.0 0.66 9.6 0.0 2.0 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase Iso_dh PF00180.15 gi|452210062|ref|YP_007490176.1| - 4.5e-94 315.2 0.0 5.2e-94 315.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aconitase_C PF00694.14 gi|452210063|ref|YP_007490177.1| - 5.3e-19 68.6 0.0 6.6e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|452210063|ref|YP_007490177.1| - 0.028 13.8 0.3 0.41 10.0 0.2 2.0 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus DUF1770 PF08589.5 gi|452210063|ref|YP_007490177.1| - 0.067 13.7 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1770) AAA_10 PF12846.2 gi|452210064|ref|YP_007490178.1| - 8.5e-14 51.6 0.0 2.4e-11 43.6 0.0 2.2 1 1 0 2 2 2 2 AAA-like domain DUF87 PF01935.12 gi|452210064|ref|YP_007490178.1| - 5.3e-09 36.2 0.0 9.9e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF87 FtsK_SpoIIIE PF01580.13 gi|452210064|ref|YP_007490178.1| - 4.6e-08 32.7 0.0 0.0038 16.7 0.0 2.2 2 0 0 2 2 2 2 FtsK/SpoIIIE family Zot PF05707.7 gi|452210064|ref|YP_007490178.1| - 0.0042 16.5 0.1 0.01 15.2 0.0 1.6 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) DUF853 PF05872.7 gi|452210064|ref|YP_007490178.1| - 0.0074 14.6 0.0 0.019 13.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA PF00004.24 gi|452210064|ref|YP_007490178.1| - 0.029 14.5 0.0 0.66 10.1 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|452210064|ref|YP_007490178.1| - 0.055 13.6 0.0 4.4 7.4 0.0 2.6 3 0 0 3 3 3 0 AAA domain Imm15 PF15590.1 gi|452210064|ref|YP_007490178.1| - 0.056 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 15 TrwB_AAD_bind PF10412.4 gi|452210064|ref|YP_007490178.1| - 0.19 10.3 0.0 8.2 4.9 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain TAFII28 PF04719.9 gi|452210065|ref|YP_007490179.1| - 0.41 10.4 4.8 0.5 10.2 3.3 1.2 1 0 0 1 1 1 0 hTAFII28-like protein conserved region SCFA_trans PF02667.9 gi|452210065|ref|YP_007490179.1| - 0.49 9.1 3.2 0.54 8.9 2.2 1.0 1 0 0 1 1 1 0 Short chain fatty acid transporter DUF3246 PF11596.3 gi|452210065|ref|YP_007490179.1| - 0.85 8.8 5.0 1 8.5 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) Hexapep PF00132.19 gi|452210065|ref|YP_007490179.1| - 1.4 8.5 12.4 7.7 6.2 8.4 2.0 1 1 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) DUF1297 PF06973.7 gi|452210066|ref|YP_007490180.1| - 7.5e-67 224.2 0.1 1e-66 223.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|452210066|ref|YP_007490180.1| - 9e-46 154.6 0.0 1.7e-45 153.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|452210066|ref|YP_007490180.1| - 1.4e-05 24.9 0.1 0.006 16.3 0.0 2.5 1 1 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|452210066|ref|YP_007490180.1| - 0.00031 20.6 0.0 0.0011 18.9 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|452210066|ref|YP_007490180.1| - 0.003 16.8 0.0 0.0055 16.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.14 gi|452210066|ref|YP_007490180.1| - 0.11 12.0 0.0 16 5.0 0.0 2.3 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HTH_20 PF12840.2 gi|452210067|ref|YP_007490181.1| - 8.3e-11 41.5 0.0 1.4e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|452210067|ref|YP_007490181.1| - 3.7e-07 29.4 0.6 3.7e-07 29.4 0.4 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF742 PF05331.6 gi|452210067|ref|YP_007490181.1| - 3.8e-05 23.2 0.0 7.1e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF742) TrmB PF01978.14 gi|452210067|ref|YP_007490181.1| - 5.3e-05 22.8 0.4 0.00014 21.5 0.3 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|452210067|ref|YP_007490181.1| - 0.00025 20.6 0.3 0.00045 19.8 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.5 gi|452210067|ref|YP_007490181.1| - 0.011 15.3 0.0 0.02 14.4 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain TFIIE_alpha PF02002.12 gi|452210067|ref|YP_007490181.1| - 0.017 14.6 0.6 0.034 13.6 0.4 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_27 PF13463.1 gi|452210067|ref|YP_007490181.1| - 0.019 15.3 0.1 0.038 14.3 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452210067|ref|YP_007490181.1| - 0.023 14.3 0.0 0.044 13.4 0.0 1.4 1 0 0 1 1 1 0 MarR family DUF2250 PF10007.4 gi|452210067|ref|YP_007490181.1| - 0.029 14.2 0.6 0.054 13.3 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_45 PF14947.1 gi|452210067|ref|YP_007490181.1| - 0.047 13.5 0.9 0.096 12.5 0.6 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix PseudoU_synth_1 PF01416.15 gi|452210068|ref|YP_007490182.1| - 5.7e-38 129.5 0.0 2.1e-22 79.5 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase UPF0020 PF01170.13 gi|452210069|ref|YP_007490183.1| - 1.1e-34 119.5 0.0 1.5e-34 119.0 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.12 gi|452210069|ref|YP_007490183.1| - 1.4e-15 57.4 0.8 4.8e-15 55.7 0.9 1.5 2 0 0 2 2 2 1 THUMP domain Methyltransf_26 PF13659.1 gi|452210069|ref|YP_007490183.1| - 2.6e-14 53.2 0.0 4.2e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210069|ref|YP_007490183.1| - 7.2e-10 39.2 0.0 2.8e-09 37.3 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|452210069|ref|YP_007490183.1| - 1.1e-08 34.8 0.0 0.0016 17.9 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_31 PF13847.1 gi|452210069|ref|YP_007490183.1| - 2.9e-08 33.4 0.0 5e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|452210069|ref|YP_007490183.1| - 4.9e-05 22.7 0.0 8e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|452210069|ref|YP_007490183.1| - 0.00014 21.4 0.0 0.00027 20.5 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.2 gi|452210069|ref|YP_007490183.1| - 0.00019 22.0 0.0 0.00052 20.5 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210069|ref|YP_007490183.1| - 0.0023 17.0 0.0 0.0055 15.8 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.9 gi|452210069|ref|YP_007490183.1| - 0.0042 16.4 0.0 0.0066 15.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain N6_Mtase PF02384.11 gi|452210069|ref|YP_007490183.1| - 0.0071 15.4 0.0 0.013 14.5 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase Mtf2_C PF14061.1 gi|452210069|ref|YP_007490183.1| - 0.027 14.3 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Methyltransf_23 PF13489.1 gi|452210069|ref|YP_007490183.1| - 0.08 12.6 0.0 0.36 10.5 0.0 2.1 2 1 0 2 2 2 0 Methyltransferase domain DUF1805 PF08827.6 gi|452210070|ref|YP_007490184.1| - 7.3e-27 92.9 2.0 9.3e-27 92.6 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) RED_N PF07808.8 gi|452210071|ref|YP_007490185.1| - 0.034 13.3 0.5 0.059 12.5 0.3 1.3 1 0 0 1 1 1 0 RED-like protein N-terminal region DUF2873 PF11395.3 gi|452210071|ref|YP_007490185.1| - 2.5 7.7 4.5 9.6 5.8 1.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) Peptidase_M24 PF00557.19 gi|452210072|ref|YP_007490186.1| - 8.9e-48 162.6 0.0 1e-47 162.4 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24 PF00557.19 gi|452210073|ref|YP_007490187.1| - 2.3e-41 141.6 0.8 3.4e-41 141.0 0.5 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2452 PF10504.4 gi|452210073|ref|YP_007490187.1| - 0.045 13.0 0.0 0.088 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) AdoMet_Synthase PF01941.14 gi|452210075|ref|YP_007490189.1| - 4e-184 611.6 0.7 4.5e-184 611.5 0.5 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.13 gi|452210076|ref|YP_007490190.1| - 4.8e-51 172.5 0.3 7.1e-51 172.0 0.2 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|452210076|ref|YP_007490190.1| - 1.9e-26 91.8 0.3 3.5e-26 90.9 0.2 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.6 gi|452210076|ref|YP_007490190.1| - 8e-07 28.8 0.1 0.00011 21.9 0.0 2.5 1 1 2 3 3 3 1 NMT1/THI5 like SBP_bac_3 PF00497.15 gi|452210076|ref|YP_007490190.1| - 0.00014 21.2 0.0 0.0002 20.7 0.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|452210076|ref|YP_007490190.1| - 0.061 12.7 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF4265 PF14085.1 gi|452210076|ref|YP_007490190.1| - 0.063 13.0 0.1 1 9.1 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4265) DUF111 PF01969.12 gi|452210076|ref|YP_007490190.1| - 0.078 11.7 0.7 9 4.9 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function DUF111 His_biosynth PF00977.16 gi|452210077|ref|YP_007490191.1| - 2.5e-79 265.7 0.4 2.8e-79 265.6 0.3 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|452210077|ref|YP_007490191.1| - 1.2e-10 40.7 0.1 0.00013 20.9 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|452210077|ref|YP_007490191.1| - 1.5e-08 34.1 0.2 7e-07 28.7 0.0 2.1 2 0 0 2 2 2 1 Nitronate monooxygenase DHO_dh PF01180.16 gi|452210077|ref|YP_007490191.1| - 2.3e-08 33.3 0.4 0.00023 20.2 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PcrB PF01884.12 gi|452210077|ref|YP_007490191.1| - 3.5e-08 32.9 0.8 0.00042 19.6 0.0 2.1 2 0 0 2 2 2 2 PcrB family NanE PF04131.9 gi|452210077|ref|YP_007490191.1| - 2.5e-07 29.8 0.2 0.017 14.0 0.1 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase TMP-TENI PF02581.12 gi|452210077|ref|YP_007490191.1| - 5.2e-06 25.6 1.3 4.5e-05 22.6 0.1 2.3 2 1 0 2 2 2 1 Thiamine monophosphate synthase/TENI IGPS PF00218.16 gi|452210077|ref|YP_007490191.1| - 9e-06 24.9 0.2 0.00062 18.9 0.0 2.1 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase ThiG PF05690.9 gi|452210077|ref|YP_007490191.1| - 1.1e-05 24.6 0.7 0.036 13.1 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.15 gi|452210077|ref|YP_007490191.1| - 3.3e-05 22.5 0.9 0.0038 15.7 0.1 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain IMPDH PF00478.20 gi|452210077|ref|YP_007490191.1| - 0.00016 20.7 0.4 0.17 10.7 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.13 gi|452210077|ref|YP_007490191.1| - 0.00032 19.6 0.4 0.094 11.5 0.0 2.1 2 0 0 2 2 2 2 FMN-dependent dehydrogenase G3P_antiterm PF04309.7 gi|452210077|ref|YP_007490191.1| - 0.0046 15.9 0.7 0.026 13.5 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator DUF561 PF04481.7 gi|452210077|ref|YP_007490191.1| - 0.021 13.7 0.2 0.038 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Ribul_P_3_epim PF00834.14 gi|452210077|ref|YP_007490191.1| - 0.029 13.4 0.2 2.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family IGPD PF00475.13 gi|452210078|ref|YP_007490192.1| - 3.2e-63 211.9 2.2 4.2e-63 211.5 1.6 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase FdhD-NarQ PF02634.10 gi|452210079|ref|YP_007490193.1| - 3.4e-54 183.8 0.0 1.6e-53 181.5 0.0 1.8 1 1 0 1 1 1 1 FdhD/NarQ family RE_Eco47II PF09553.5 gi|452210079|ref|YP_007490193.1| - 0.058 12.5 0.0 0.081 12.0 0.0 1.2 1 0 0 1 1 1 0 Eco47II restriction endonuclease DUF1628 PF07790.6 gi|452210081|ref|YP_007490195.1| - 1.6 9.4 9.4 3.6 8.4 5.2 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|452210082|ref|YP_007490196.1| - 5.7e-21 75.0 0.7 1.3e-20 73.9 0.2 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) PKD_channel PF08016.7 gi|452210082|ref|YP_007490196.1| - 0.049 12.0 0.5 0.083 11.2 0.3 1.3 1 0 0 1 1 1 0 Polycystin cation channel DUF1628 PF07790.6 gi|452210083|ref|YP_007490197.1| - 7.3e-22 77.9 1.3 9e-22 77.6 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF2306 PF10067.4 gi|452210083|ref|YP_007490197.1| - 0.098 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) PKD_channel PF08016.7 gi|452210083|ref|YP_007490197.1| - 0.1 11.0 1.3 0.13 10.6 0.9 1.1 1 0 0 1 1 1 0 Polycystin cation channel DUF1628 PF07790.6 gi|452210084|ref|YP_007490198.1| - 1.3e-17 64.3 0.2 1.5e-17 64.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|452210086|ref|YP_007490200.1| - 2.6e-20 72.9 1.5 4.1e-20 72.3 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) ABC2_membrane_3 PF12698.2 gi|452210086|ref|YP_007490200.1| - 0.11 11.5 0.1 0.14 11.1 0.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF1628 PF07790.6 gi|452210087|ref|YP_007490201.1| - 2.9e-10 40.7 2.7 3.2e-10 40.6 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) T2SF PF00482.18 gi|452210088|ref|YP_007490202.1| - 1.2e-34 118.9 4.7 1.3e-21 76.7 1.5 4.1 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F T2SE PF00437.15 gi|452210089|ref|YP_007490203.1| - 4e-45 153.8 0.0 6.5e-45 153.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|452210089|ref|YP_007490203.1| - 0.0062 16.0 0.1 0.016 14.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Aminotran_5 PF00266.14 gi|452210091|ref|YP_007490205.1| - 3.9e-132 440.4 0.0 4.4e-132 440.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|452210091|ref|YP_007490205.1| - 4.5e-12 45.6 0.0 6.1e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|452210091|ref|YP_007490205.1| - 3.8e-08 32.0 0.0 6.1e-08 31.3 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|452210091|ref|YP_007490205.1| - 7.6e-08 31.6 0.1 2.8e-06 26.5 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|452210091|ref|YP_007490205.1| - 5.6e-06 25.7 0.0 9.4e-06 24.9 0.0 1.5 1 0 0 1 1 1 1 Beta-eliminating lyase SHMT PF00464.14 gi|452210091|ref|YP_007490205.1| - 0.0016 16.8 0.0 0.0025 16.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase OKR_DC_1 PF01276.15 gi|452210091|ref|YP_007490205.1| - 0.089 11.3 0.1 0.34 9.3 0.1 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Acetyltransf_1 PF00583.19 gi|452210094|ref|YP_007490208.1| - 2.3e-12 46.7 0.0 3.8e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452210094|ref|YP_007490208.1| - 9.8e-11 41.6 0.0 1.4e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452210094|ref|YP_007490208.1| - 6e-07 29.6 0.0 7.4e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452210094|ref|YP_007490208.1| - 1.1e-05 25.2 0.0 3e-05 23.8 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452210094|ref|YP_007490208.1| - 2.4e-05 24.1 0.0 3.8e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.5 gi|452210094|ref|YP_007490208.1| - 7.4e-05 22.4 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|452210094|ref|YP_007490208.1| - 0.0051 16.6 0.0 0.0091 15.8 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452210094|ref|YP_007490208.1| - 0.021 14.7 0.0 0.54 10.2 0.0 2.1 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.1 gi|452210094|ref|YP_007490208.1| - 0.024 13.9 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Asn_synthase PF00733.16 gi|452210095|ref|YP_007490209.1| - 4.5e-08 32.8 0.3 3.5e-07 29.9 0.0 2.3 2 1 1 3 3 3 1 Asparagine synthase NAD_synthase PF02540.12 gi|452210095|ref|YP_007490209.1| - 1.4e-06 27.3 0.0 2.2e-06 26.7 0.0 1.4 1 1 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|452210095|ref|YP_007490209.1| - 3.7e-06 26.3 0.0 8.4e-05 21.9 0.0 2.7 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 gi|452210095|ref|YP_007490209.1| - 0.00064 19.2 0.0 0.0062 16.0 0.0 2.2 1 1 0 1 1 1 1 PP-loop family ThiI PF02568.9 gi|452210095|ref|YP_007490209.1| - 0.0021 17.5 0.0 0.0058 16.1 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.11 gi|452210095|ref|YP_007490209.1| - 0.017 13.7 0.0 0.95 7.9 0.0 2.3 2 0 0 2 2 2 0 tRNA methyl transferase PAPS_reduct PF01507.14 gi|452210095|ref|YP_007490209.1| - 0.026 14.3 0.0 0.43 10.3 0.0 2.2 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family PGM_PMM_I PF02878.11 gi|452210096|ref|YP_007490210.1| - 1.2e-38 131.7 0.1 3.4e-38 130.2 0.1 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|452210096|ref|YP_007490210.1| - 1e-26 93.2 0.0 1.9e-26 92.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|452210096|ref|YP_007490210.1| - 6.4e-25 87.3 0.0 1.2e-24 86.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|452210096|ref|YP_007490210.1| - 5.9e-12 45.4 0.0 2e-11 43.6 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_18 PF12847.2 gi|452210096|ref|YP_007490210.1| - 0.072 13.6 0.0 0.29 11.7 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210096|ref|YP_007490210.1| - 0.1 12.2 0.0 0.49 10.1 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Radical_SAM PF04055.16 gi|452210097|ref|YP_007490211.1| - 1.7e-26 93.3 0.2 1.9e-25 89.9 0.1 2.2 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|452210097|ref|YP_007490211.1| - 3.6e-11 42.9 0.0 2.2e-10 40.4 0.0 2.2 2 0 0 2 2 2 1 B12 binding domain Peptidase_M50 PF02163.17 gi|452210098|ref|YP_007490212.1| - 8.5e-16 57.4 11.5 4.2e-15 55.2 5.6 2.7 2 1 0 2 2 2 1 Peptidase family M50 2TM PF13239.1 gi|452210098|ref|YP_007490212.1| - 3.8 7.6 7.8 0.28 11.2 1.2 2.3 2 0 0 2 2 2 0 2TM domain DUF126 PF01989.11 gi|452210099|ref|YP_007490213.1| - 1.4e-36 124.0 0.3 1.9e-36 123.5 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 DUF521 PF04412.8 gi|452210100|ref|YP_007490214.1| - 2.1e-152 507.3 0.1 2.4e-152 507.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) UbiD PF01977.11 gi|452210101|ref|YP_007490215.1| - 2.7e-128 427.9 0.9 3.1e-128 427.7 0.6 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Citrate_synt PF00285.16 gi|452210102|ref|YP_007490216.1| - 2.8e-122 407.8 0.0 3.2e-122 407.7 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase Aconitase PF00330.15 gi|452210103|ref|YP_007490217.1| - 3.3e-142 474.2 0.0 2.8e-100 335.9 0.0 2.1 2 0 0 2 2 2 2 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|452210103|ref|YP_007490217.1| - 8.1e-38 129.4 0.0 2e-37 128.1 0.0 1.7 1 0 0 1 1 1 1 Aconitase C-terminal domain HDC PF02329.11 gi|452210106|ref|YP_007490220.1| - 0.0089 14.7 0.0 0.2 10.2 0.0 2.6 2 1 1 3 3 3 1 Histidine carboxylase PI chain DUF496 PF04363.7 gi|452210106|ref|YP_007490220.1| - 0.015 15.0 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF496) DNA_ligase_A_N PF04675.9 gi|452210106|ref|YP_007490220.1| - 0.033 14.0 0.7 0.18 11.6 0.1 2.1 2 0 0 2 2 2 0 DNA ligase N terminus VWA_2 PF13519.1 gi|452210107|ref|YP_007490221.1| - 3.7e-10 40.1 0.0 6.1e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|452210107|ref|YP_007490221.1| - 8.2e-10 38.1 0.0 1.4e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.1 gi|452210107|ref|YP_007490221.1| - 7e-08 32.2 0.0 2e-07 30.8 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|452210107|ref|YP_007490221.1| - 2e-07 30.9 0.0 4.3e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.4 gi|452210107|ref|YP_007490221.1| - 0.00017 21.6 0.0 0.00038 20.4 0.0 1.6 1 0 0 1 1 1 1 VWA-like domain (DUF2201) CobT_C PF11775.3 gi|452210107|ref|YP_007490221.1| - 0.026 13.9 0.1 0.23 10.8 0.0 2.2 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain RP-C_C PF11800.3 gi|452210107|ref|YP_007490221.1| - 0.57 9.8 4.2 0.95 9.1 2.9 1.3 1 0 0 1 1 1 0 Replication protein C C-terminal region DUF4535 PF15054.1 gi|452210108|ref|YP_007490222.1| - 0.11 11.8 0.1 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4535) ThiF PF00899.16 gi|452210110|ref|YP_007490224.1| - 4.3e-44 149.6 0.1 7.9e-44 148.7 0.0 1.4 1 1 1 2 2 2 1 ThiF family MoeZ_MoeB PF05237.8 gi|452210110|ref|YP_007490224.1| - 7e-18 64.0 0.0 1.7e-17 62.8 0.0 1.6 1 0 0 1 1 1 1 MoeZ/MoeB domain Shikimate_DH PF01488.15 gi|452210110|ref|YP_007490224.1| - 0.05 13.7 0.4 0.17 11.9 0.1 1.8 1 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF2007 PF09413.5 gi|452210110|ref|YP_007490224.1| - 0.12 12.2 0.1 0.29 10.9 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF2007) Aldolase_II PF00596.16 gi|452210112|ref|YP_007490226.1| - 2.6e-35 121.7 0.1 2.9e-35 121.5 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CDP-OH_P_transf PF01066.16 gi|452210114|ref|YP_007490228.1| - 1.4e-14 54.1 13.3 6.8e-14 51.9 8.5 2.3 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase Archease PF01951.11 gi|452210115|ref|YP_007490229.1| - 3.1e-47 159.9 0.8 3.5e-47 159.8 0.6 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) UPF0150 PF03681.10 gi|452210115|ref|YP_007490229.1| - 0.14 11.7 0.9 0.36 10.5 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0150) RtcB PF01139.12 gi|452210116|ref|YP_007490230.1| - 2.2e-155 517.8 0.1 2.5e-155 517.6 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB MtrH PF02007.13 gi|452210119|ref|YP_007490233.1| - 4.4e-147 488.7 0.5 5e-147 488.6 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.8 gi|452210120|ref|YP_007490234.1| - 5.3e-36 122.1 0.5 5.9e-36 121.9 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G TIM PF00121.13 gi|452210120|ref|YP_007490234.1| - 0.002 17.2 0.0 0.0026 16.8 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase MtrF PF09472.5 gi|452210121|ref|YP_007490235.1| - 3.4e-29 99.8 1.5 3.7e-29 99.7 1.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrA PF04208.9 gi|452210122|ref|YP_007490236.1| - 3e-84 280.8 0.7 3.9e-84 280.4 0.5 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.5 gi|452210122|ref|YP_007490236.1| - 0.074 12.2 0.7 0.18 11.0 0.5 1.7 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.7 gi|452210123|ref|YP_007490237.1| - 1.5e-46 156.3 0.0 1.7e-46 156.1 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.8 gi|452210124|ref|YP_007490238.1| - 1e-112 375.5 30.9 1.2e-112 375.3 21.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C MtrD PF04207.7 gi|452210125|ref|YP_007490239.1| - 6.3e-112 372.3 28.7 7.6e-112 372.1 19.9 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.7 gi|452210126|ref|YP_007490240.1| - 1.3e-108 362.1 12.4 1.4e-108 361.9 8.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E SpecificRecomb PF10136.4 gi|452210126|ref|YP_007490240.1| - 0.07 11.1 0.3 0.096 10.7 0.2 1.2 1 0 0 1 1 1 0 Site-specific recombinase DUF2207 PF09972.4 gi|452210126|ref|YP_007490240.1| - 0.072 11.6 0.1 0.072 11.6 0.1 2.0 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) DUF1673 PF07895.6 gi|452210126|ref|YP_007490240.1| - 7 6.1 9.6 1.5 8.3 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) SSF PF00474.12 gi|452210127|ref|YP_007490241.1| - 6.8e-36 123.7 30.8 1.5e-35 122.6 20.9 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family DUF2613 PF11021.3 gi|452210127|ref|YP_007490241.1| - 0.053 13.2 0.0 0.053 13.2 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) TOBE PF03459.12 gi|452210128|ref|YP_007490242.1| - 3e-16 59.2 0.8 4e-16 58.8 0.1 1.5 2 0 0 2 2 2 1 TOBE domain TOBE_2 PF08402.5 gi|452210128|ref|YP_007490242.1| - 0.0018 18.2 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 TOBE domain Rad9_Rad53_bind PF08605.5 gi|452210128|ref|YP_007490242.1| - 0.025 14.3 0.1 0.033 13.9 0.1 1.3 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding ENT PF03735.9 gi|452210128|ref|YP_007490242.1| - 0.059 13.1 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 ENT domain TOBE_3 PF12857.2 gi|452210128|ref|YP_007490242.1| - 0.061 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 TOBE-like domain TrmB PF01978.14 gi|452210129|ref|YP_007490243.1| - 1.4e-24 85.5 0.1 2.3e-24 84.8 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|452210129|ref|YP_007490243.1| - 0.00011 21.2 0.0 0.00017 20.6 0.0 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.5 gi|452210129|ref|YP_007490243.1| - 0.00012 21.5 0.1 0.0017 17.9 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|452210129|ref|YP_007490243.1| - 0.003 17.3 0.0 0.0063 16.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.15 gi|452210129|ref|YP_007490243.1| - 0.0076 16.3 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Helicase_C_2 PF13307.1 gi|452210129|ref|YP_007490243.1| - 0.01 15.8 0.1 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Helicase C-terminal domain HTH_27 PF13463.1 gi|452210129|ref|YP_007490243.1| - 0.02 15.2 0.0 0.058 13.7 0.0 1.8 1 1 1 2 2 2 0 Winged helix DNA-binding domain PadR PF03551.9 gi|452210129|ref|YP_007490243.1| - 0.032 14.0 0.0 0.12 12.2 0.0 1.8 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family Penicillinase_R PF03965.11 gi|452210129|ref|YP_007490243.1| - 0.042 13.9 0.0 0.071 13.2 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor HTH_34 PF13601.1 gi|452210129|ref|YP_007490243.1| - 0.049 13.6 0.0 0.15 12.1 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_9 PF08221.6 gi|452210129|ref|YP_007490243.1| - 0.076 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_5 PF01022.15 gi|452210129|ref|YP_007490243.1| - 0.084 12.5 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family GntR PF00392.16 gi|452210129|ref|YP_007490243.1| - 0.11 11.9 0.1 0.55 9.6 0.0 2.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family Lactamase_B_3 PF13483.1 gi|452210130|ref|YP_007490244.1| - 4.2e-37 127.3 0.0 5.2e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|452210130|ref|YP_007490244.1| - 2.3e-18 66.4 0.1 4.8e-18 65.4 0.0 1.5 1 1 1 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452210130|ref|YP_007490244.1| - 0.00046 19.8 0.5 0.15 11.7 0.1 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Rpr2 PF04032.11 gi|452210131|ref|YP_007490245.1| - 2.7e-21 75.2 0.3 3.6e-21 74.8 0.2 1.2 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF164 PF02591.10 gi|452210131|ref|YP_007490245.1| - 0.018 14.8 0.4 0.038 13.8 0.3 1.5 1 0 0 1 1 1 0 Putative zinc ribbon domain DZR PF12773.2 gi|452210131|ref|YP_007490245.1| - 0.02 14.7 0.4 0.043 13.6 0.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-FCS PF06467.9 gi|452210131|ref|YP_007490245.1| - 0.033 13.8 1.8 0.26 10.9 0.1 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Zn_Tnp_IS1595 PF12760.2 gi|452210131|ref|YP_007490245.1| - 0.12 12.2 0.5 2.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain CpXC PF14353.1 gi|452210131|ref|YP_007490245.1| - 0.15 12.0 1.7 0.44 10.5 0.7 2.0 1 1 2 3 3 3 0 CpXC protein zf-BED PF02892.10 gi|452210131|ref|YP_007490245.1| - 0.3 10.8 2.2 2.1 8.1 0.2 2.5 3 0 0 3 3 3 0 BED zinc finger zinc_ribbon_6 PF14599.1 gi|452210131|ref|YP_007490245.1| - 0.35 10.7 2.6 6.2 6.6 0.0 2.7 2 1 1 3 3 3 0 Zinc-ribbon SRP19 PF01922.12 gi|452210132|ref|YP_007490246.1| - 1.7e-27 95.8 0.2 2e-27 95.6 0.1 1.0 1 0 0 1 1 1 1 SRP19 protein DUF1628 PF07790.6 gi|452210135|ref|YP_007490249.1| - 1.5e-11 44.8 0.2 5.4e-11 43.0 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Arch_flagellin PF01917.11 gi|452210135|ref|YP_007490249.1| - 2.6 7.6 5.8 0.7 9.4 0.7 2.1 2 1 0 2 2 2 0 Archaebacterial flagellin PBP_like_2 PF12849.2 gi|452210137|ref|YP_007490251.1| - 1.1e-26 94.0 0.9 1.3e-26 93.6 0.7 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|452210137|ref|YP_007490251.1| - 2e-14 53.8 0.0 2.8e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|452210137|ref|YP_007490251.1| - 0.001 18.8 0.1 0.72 9.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein DNA_pol_B_palm PF14792.1 gi|452210137|ref|YP_007490251.1| - 0.16 12.0 0.0 27 4.8 0.0 2.2 2 0 0 2 2 2 0 DNA polymerase beta palm DUF3994 PF13159.1 gi|452210137|ref|YP_007490251.1| - 3 8.1 6.8 15 5.9 0.0 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF3994) BPD_transp_1 PF00528.17 gi|452210139|ref|YP_007490253.1| - 1.1e-14 54.4 19.6 1.2e-14 54.2 13.6 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|452210140|ref|YP_007490254.1| - 3.3e-33 114.8 0.0 7.6e-33 113.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.12 gi|452210140|ref|YP_007490254.1| - 4.6e-13 49.0 0.0 1.3e-12 47.6 0.0 1.8 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.1 gi|452210140|ref|YP_007490254.1| - 1.7e-12 47.9 1.0 1e-10 42.1 0.2 2.5 2 1 0 2 2 2 1 AAA domain TOBE_2 PF08402.5 gi|452210140|ref|YP_007490254.1| - 3.3e-09 36.6 0.0 7e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.14 gi|452210140|ref|YP_007490254.1| - 2.7e-05 23.4 2.2 0.0012 18.1 0.3 2.8 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452210140|ref|YP_007490254.1| - 4.4e-05 22.6 2.2 0.0012 17.9 0.1 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|452210140|ref|YP_007490254.1| - 0.00018 21.6 0.5 0.0026 17.9 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|452210140|ref|YP_007490254.1| - 0.004 17.1 0.0 0.0094 15.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.1 gi|452210140|ref|YP_007490254.1| - 0.0066 16.3 0.0 0.041 13.7 0.0 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DEAD PF00270.24 gi|452210140|ref|YP_007490254.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_23 PF13476.1 gi|452210140|ref|YP_007490254.1| - 0.011 16.0 3.7 0.045 14.0 2.5 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|452210140|ref|YP_007490254.1| - 0.014 14.9 0.1 0.026 14.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ResIII PF04851.10 gi|452210140|ref|YP_007490254.1| - 0.024 14.4 0.1 0.085 12.6 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit CheB_methylest PF01339.12 gi|452210140|ref|YP_007490254.1| - 0.047 13.1 0.0 0.095 12.1 0.0 1.5 1 1 0 1 1 1 0 CheB methylesterase Arch_ATPase PF01637.13 gi|452210140|ref|YP_007490254.1| - 0.059 13.0 0.1 0.16 11.6 0.1 1.8 1 1 0 1 1 1 0 Archaeal ATPase IstB_IS21 PF01695.12 gi|452210140|ref|YP_007490254.1| - 0.15 11.4 0.4 3.5 7.0 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein Fer4 PF00037.22 gi|452210141|ref|YP_007490255.1| - 4.3e-52 171.7 84.2 2e-08 33.4 1.2 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452210141|ref|YP_007490255.1| - 1e-48 163.4 151.7 8.9e-11 42.0 8.0 6.0 1 1 8 9 9 9 9 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210141|ref|YP_007490255.1| - 1.6e-35 119.4 80.9 1.8e-06 27.5 0.5 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452210141|ref|YP_007490255.1| - 8.4e-35 118.8 59.1 2.2e-10 40.6 4.7 5.6 4 2 1 5 5 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452210141|ref|YP_007490255.1| - 3e-32 111.1 54.0 1.6e-11 44.7 3.3 7.1 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|452210141|ref|YP_007490255.1| - 3.3e-29 100.4 62.7 3e-09 36.5 6.3 6.7 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210141|ref|YP_007490255.1| - 1.8e-27 94.9 66.7 2.2e-07 30.6 6.0 6.4 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210141|ref|YP_007490255.1| - 1.5e-24 85.7 123.5 1.2e-08 34.8 5.4 5.5 1 1 6 7 7 7 7 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210141|ref|YP_007490255.1| - 8.3e-24 82.0 79.1 9.6e-07 28.3 2.1 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452210141|ref|YP_007490255.1| - 3.5e-20 72.1 53.4 2.9e-05 24.3 6.6 5.8 5 1 0 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452210141|ref|YP_007490255.1| - 8.7e-19 66.1 76.4 0.00063 19.8 1.9 8.2 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452210141|ref|YP_007490255.1| - 4.4e-17 62.2 62.2 0.0033 17.8 0.8 8.1 7 1 1 8 8 8 7 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452210141|ref|YP_007490255.1| - 1.9e-13 49.8 107.9 0.0062 17.0 4.4 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452210141|ref|YP_007490255.1| - 7.2e-09 36.0 67.1 0.024 15.1 0.7 8.7 7 2 1 8 8 8 5 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452210141|ref|YP_007490255.1| - 0.0018 18.6 79.7 0.057 13.8 2.1 8.6 7 1 0 7 7 7 3 4Fe-4S single cluster domain Amidohydro_3 PF07969.6 gi|452210142|ref|YP_007490256.1| - 2.1e-74 251.1 0.2 2.5e-74 250.9 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|452210142|ref|YP_007490256.1| - 1e-10 41.2 0.1 1.1e-09 38.0 0.0 2.5 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|452210142|ref|YP_007490256.1| - 4.5e-06 26.9 0.5 0.0015 18.6 0.1 2.5 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|452210142|ref|YP_007490256.1| - 0.00018 21.2 0.5 0.26 10.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family GXGXG PF01493.14 gi|452210143|ref|YP_007490257.1| - 7.7e-43 145.8 23.0 1.2e-42 145.2 15.9 1.2 1 0 0 1 1 1 1 GXGXG motif Molydop_binding PF01568.16 gi|452210144|ref|YP_007490258.1| - 4.2e-16 58.7 0.0 5e-16 58.4 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.17 gi|452210145|ref|YP_007490259.1| - 1.5e-15 56.9 0.0 5.4e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Cyt-b5 PF00173.23 gi|452210146|ref|YP_007490260.1| - 1.3e-09 37.6 0.1 1.7e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ArdA PF07275.6 gi|452210146|ref|YP_007490260.1| - 0.02 15.1 0.2 0.023 14.9 0.2 1.0 1 0 0 1 1 1 0 Antirestriction protein (ArdA) SIMPL PF04402.9 gi|452210148|ref|YP_007490262.1| - 1.4e-49 168.8 11.1 1.7e-49 168.5 7.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) YbaB_DNA_bd PF02575.11 gi|452210148|ref|YP_007490262.1| - 0.0062 16.3 3.5 0.0071 16.2 0.1 2.6 3 0 0 3 3 3 1 YbaB/EbfC DNA-binding family DUF4448 PF14610.1 gi|452210148|ref|YP_007490262.1| - 0.033 13.6 0.3 0.17 11.3 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF4448) Acetyltransf_9 PF13527.1 gi|452210149|ref|YP_007490263.1| - 0.002 17.9 0.0 0.0054 16.5 0.0 1.6 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain DUF4301 PF14134.1 gi|452210149|ref|YP_007490263.1| - 0.11 11.0 0.0 0.11 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) DUF1250 PF06855.7 gi|452210150|ref|YP_007490264.1| - 0.0051 16.3 0.3 0.0066 15.9 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1250) Methyltransf_31 PF13847.1 gi|452210151|ref|YP_007490265.1| - 4e-13 49.2 0.0 4.5e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210151|ref|YP_007490265.1| - 4.2e-12 46.3 0.0 5.7e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452210151|ref|YP_007490265.1| - 1e-11 44.4 0.0 1.3e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.7 gi|452210151|ref|YP_007490265.1| - 3.1e-10 40.4 0.0 4.3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210151|ref|YP_007490265.1| - 7.5e-10 39.3 0.0 1e-09 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210151|ref|YP_007490265.1| - 7.5e-09 35.8 0.0 9.7e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210151|ref|YP_007490265.1| - 8.3e-09 35.3 0.0 9.9e-09 35.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452210151|ref|YP_007490265.1| - 5.9e-06 25.9 0.0 7.6e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|452210151|ref|YP_007490265.1| - 3.6e-05 22.8 0.0 5.2e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.9 gi|452210151|ref|YP_007490265.1| - 3.8e-05 23.1 0.0 9.8e-05 21.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|452210151|ref|YP_007490265.1| - 8.4e-05 21.7 0.0 0.00015 20.9 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|452210151|ref|YP_007490265.1| - 0.00082 19.3 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|452210151|ref|YP_007490265.1| - 0.024 14.0 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) PrmA PF06325.8 gi|452210151|ref|YP_007490265.1| - 0.049 12.7 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|452210151|ref|YP_007490265.1| - 0.06 12.9 0.0 0.079 12.5 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Pox_MCEL PF03291.11 gi|452210151|ref|YP_007490265.1| - 0.1 11.4 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 mRNA capping enzyme Phage_holin PF04688.8 gi|452210153|ref|YP_007490267.1| - 0.13 11.7 2.1 0.19 11.2 1.4 1.2 1 0 0 1 1 1 0 Phage lysis protein, holin DUF364 PF04016.7 gi|452210154|ref|YP_007490268.1| - 7.2e-42 142.1 0.0 1.1e-41 141.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF364) DUF4213 PF13938.1 gi|452210154|ref|YP_007490268.1| - 8.2e-24 83.5 0.0 1.4e-23 82.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4213) QRPTase_C PF01729.14 gi|452210155|ref|YP_007490269.1| - 1.3e-26 93.1 0.0 2e-26 92.5 0.0 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|452210155|ref|YP_007490269.1| - 2.1e-14 53.0 0.0 5.9e-14 51.6 0.0 1.7 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain Tropomodulin PF03250.9 gi|452210155|ref|YP_007490269.1| - 0.019 14.5 0.1 0.031 13.8 0.1 1.3 1 0 0 1 1 1 0 Tropomodulin B12-binding PF02310.14 gi|452210155|ref|YP_007490269.1| - 0.08 12.8 0.0 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 B12 binding domain ABC_tran PF00005.22 gi|452210156|ref|YP_007490270.1| - 2.4e-31 108.8 0.0 4e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.12 gi|452210156|ref|YP_007490270.1| - 7.8e-18 64.3 0.9 7.2e-15 54.8 0.1 3.1 2 1 0 2 2 2 2 TOBE domain AAA_21 PF13304.1 gi|452210156|ref|YP_007490270.1| - 8.5e-10 39.0 0.2 7.4e-05 22.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452210156|ref|YP_007490270.1| - 6.5e-06 25.5 0.1 0.0002 20.6 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|452210156|ref|YP_007490270.1| - 5.9e-05 22.9 0.1 0.00069 19.4 0.1 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.1 gi|452210156|ref|YP_007490270.1| - 0.00019 21.4 0.0 0.00043 20.3 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|452210156|ref|YP_007490270.1| - 0.00064 18.8 0.0 0.019 14.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain TOBE_2 PF08402.5 gi|452210156|ref|YP_007490270.1| - 0.0045 16.9 0.1 0.012 15.6 0.1 1.8 1 1 0 1 1 1 1 TOBE domain AAA_22 PF13401.1 gi|452210156|ref|YP_007490270.1| - 0.0054 16.8 0.2 0.023 14.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|452210156|ref|YP_007490270.1| - 0.01 14.7 0.0 0.021 13.7 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|452210156|ref|YP_007490270.1| - 0.015 14.8 0.1 0.03 13.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.7 gi|452210156|ref|YP_007490270.1| - 0.056 13.1 0.2 0.89 9.1 0.0 2.2 2 0 0 2 2 2 0 NACHT domain Mg_chelatase PF01078.16 gi|452210156|ref|YP_007490270.1| - 0.069 12.3 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.7 gi|452210156|ref|YP_007490270.1| - 0.12 11.5 0.0 0.24 10.4 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_10 PF12846.2 gi|452210156|ref|YP_007490270.1| - 0.14 11.6 0.0 0.54 9.6 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain BPD_transp_1 PF00528.17 gi|452210157|ref|YP_007490271.1| - 1.8e-17 63.4 13.3 1.8e-17 63.4 9.2 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.1 gi|452210158|ref|YP_007490272.1| - 1.8e-46 158.6 0.0 2.1e-46 158.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.15 gi|452210158|ref|YP_007490272.1| - 1.1e-05 24.8 0.0 1.8e-05 24.0 0.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|452210158|ref|YP_007490272.1| - 0.0058 16.0 0.0 0.017 14.5 0.0 1.8 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein PBP_like PF12727.2 gi|452210158|ref|YP_007490272.1| - 0.03 13.2 0.1 0.13 11.1 0.0 2.0 1 1 0 1 1 1 0 PBP superfamily domain YhfZ_C PF14503.1 gi|452210158|ref|YP_007490272.1| - 0.053 12.8 0.4 0.14 11.5 0.2 1.6 2 0 0 2 2 2 0 YhfZ C-terminal domain Flavodoxin_2 PF02525.12 gi|452210159|ref|YP_007490273.1| - 8.3e-56 188.6 0.1 9.8e-56 188.4 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.10 gi|452210159|ref|YP_007490273.1| - 5.9e-16 58.3 0.1 1.1e-14 54.1 0.0 2.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Pox_A_type_inc PF04508.7 gi|452210159|ref|YP_007490273.1| - 0.19 11.6 1.3 0.46 10.3 0.9 1.7 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat FMN_red PF03358.10 gi|452210160|ref|YP_007490274.1| - 4.6e-29 100.8 0.0 5.9e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452210160|ref|YP_007490274.1| - 5e-10 39.2 0.0 5.9e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.4 gi|452210160|ref|YP_007490274.1| - 0.036 13.6 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) ABM PF03992.11 gi|452210161|ref|YP_007490275.1| - 1.1e-12 47.7 0.0 1.3e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Nitroreductase PF00881.19 gi|452210162|ref|YP_007490276.1| - 7e-33 113.7 0.5 4.6e-31 107.8 0.3 2.0 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|452210162|ref|YP_007490276.1| - 0.046 12.9 0.5 4.1 6.5 0.0 2.4 1 1 2 3 3 3 0 Putative TM nitroreductase FMN_red PF03358.10 gi|452210163|ref|YP_007490277.1| - 2.8e-26 91.8 0.0 3.2e-26 91.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452210163|ref|YP_007490277.1| - 7.2e-14 51.7 0.0 8.2e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452210163|ref|YP_007490277.1| - 0.0018 18.3 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain HxlR PF01638.12 gi|452210165|ref|YP_007490279.1| - 2.1e-21 75.3 0.0 2.5e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|452210165|ref|YP_007490279.1| - 0.0035 17.0 0.0 0.0051 16.5 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF505 PF04458.7 gi|452210165|ref|YP_007490279.1| - 0.044 11.9 0.0 0.047 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) MarR PF01047.17 gi|452210165|ref|YP_007490279.1| - 0.045 13.4 0.0 0.073 12.7 0.0 1.4 1 0 0 1 1 1 0 MarR family Helicase_C_2 PF13307.1 gi|452210166|ref|YP_007490280.1| - 1.2e-27 96.9 0.0 3.2e-27 95.5 0.0 1.7 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.10 gi|452210166|ref|YP_007490280.1| - 1.2e-17 63.8 1.9 2e-16 59.8 1.3 2.2 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.10 gi|452210166|ref|YP_007490280.1| - 1.7e-08 34.4 1.9 5.4e-08 32.8 1.3 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|452210166|ref|YP_007490280.1| - 2.3e-05 23.9 0.2 0.001 18.6 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.11 gi|452210166|ref|YP_007490280.1| - 5.3e-05 22.5 0.1 0.00023 20.4 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein Zot PF05707.7 gi|452210166|ref|YP_007490280.1| - 0.00072 19.0 0.0 0.068 12.6 0.0 2.4 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) KaiC PF06745.8 gi|452210166|ref|YP_007490280.1| - 0.022 13.8 0.0 0.036 13.1 0.0 1.3 1 0 0 1 1 1 0 KaiC Sigma54_activat PF00158.21 gi|452210166|ref|YP_007490280.1| - 0.031 13.7 0.1 0.091 12.2 0.1 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF2075 PF09848.4 gi|452210166|ref|YP_007490280.1| - 0.042 12.8 1.1 1 8.2 0.1 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) MCM_N PF14551.1 gi|452210166|ref|YP_007490280.1| - 0.065 13.7 0.0 0.15 12.5 0.0 1.8 1 0 0 1 1 1 0 MCM N-terminal domain AAA_34 PF13872.1 gi|452210166|ref|YP_007490280.1| - 0.13 10.9 0.0 0.8 8.4 0.0 2.0 1 1 0 2 2 2 0 P-loop containing NTP hydrolase pore-1 Sigma54_activ_2 PF14532.1 gi|452210166|ref|YP_007490280.1| - 0.14 12.2 0.1 6.4 6.8 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain T2SE PF00437.15 gi|452210166|ref|YP_007490280.1| - 0.16 10.8 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_22 PF13401.1 gi|452210166|ref|YP_007490280.1| - 0.16 12.0 1.6 15 5.7 0.0 2.8 2 1 0 2 2 2 0 AAA domain AAA PF00004.24 gi|452210166|ref|YP_007490280.1| - 0.51 10.5 6.7 15 5.7 2.4 3.2 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) NosD PF05048.8 gi|452210168|ref|YP_007490282.1| - 4.3e-53 179.8 35.8 7.4e-53 179.1 24.8 1.4 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452210168|ref|YP_007490282.1| - 5.8e-21 74.0 13.9 1.6e-19 69.3 8.4 2.7 2 0 0 2 2 2 1 PKD domain Beta_helix PF13229.1 gi|452210168|ref|YP_007490282.1| - 6.4e-20 71.4 76.8 3.9e-12 46.2 33.0 2.5 1 1 1 2 2 2 2 Right handed beta helix region Pectinesterase PF01095.14 gi|452210168|ref|YP_007490282.1| - 0.0088 14.6 0.1 0.0088 14.6 0.1 2.4 3 0 0 3 3 3 1 Pectinesterase NosD PF05048.8 gi|452210169|ref|YP_007490283.1| - 1.1e-56 191.6 32.0 1.1e-56 191.6 22.2 2.6 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452210169|ref|YP_007490283.1| - 8.5e-42 140.7 38.4 1.3e-16 60.0 3.0 4.5 4 0 0 4 4 4 4 PKD domain Beta_helix PF13229.1 gi|452210169|ref|YP_007490283.1| - 1.7e-21 76.6 60.1 3e-14 53.0 25.3 3.5 2 1 1 3 3 3 2 Right handed beta helix region DUF3876 PF12992.2 gi|452210169|ref|YP_007490283.1| - 0.13 12.1 2.2 35 4.4 0.0 3.9 4 0 0 4 4 4 0 Domain of unknown function, B. Theta Gene description (DUF3876) Spore_YtfJ PF09579.5 gi|452210170|ref|YP_007490284.1| - 1.2e-20 73.0 3.8 2.1e-20 72.3 2.6 1.4 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) DUF2953 PF11167.3 gi|452210172|ref|YP_007490286.1| - 1.8e-14 53.3 0.0 4.1e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) CbiQ PF02361.11 gi|452210172|ref|YP_007490286.1| - 0.0067 16.0 0.0 0.038 13.5 0.0 2.0 2 0 0 2 2 2 1 Cobalt transport protein Tetraspannin PF00335.15 gi|452210172|ref|YP_007490286.1| - 0.0068 15.7 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 Tetraspanin family Phage-tail_3 PF13550.1 gi|452210172|ref|YP_007490286.1| - 0.1 12.3 0.2 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Putative phage tail protein Srg PF02118.16 gi|452210172|ref|YP_007490286.1| - 5.6 6.3 13.1 0.25 10.7 4.7 1.7 2 0 0 2 2 2 0 Srg family chemoreceptor GHMP_kinases_N PF00288.21 gi|452210173|ref|YP_007490287.1| - 2.9e-10 40.0 0.7 5.9e-10 39.0 0.5 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|452210173|ref|YP_007490287.1| - 9.4e-08 32.1 0.0 1.7e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal Nop PF01798.13 gi|452210174|ref|YP_007490288.1| - 1.7e-56 189.6 0.2 2.8e-56 189.0 0.1 1.3 1 0 0 1 1 1 1 Putative snoRNA binding domain NOSIC PF08060.8 gi|452210174|ref|YP_007490288.1| - 9.8e-11 41.2 0.0 2e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 NOSIC (NUC001) domain PspB PF06667.7 gi|452210174|ref|YP_007490288.1| - 0.1 12.5 0.3 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 Phage shock protein B Fibrillarin PF01269.12 gi|452210175|ref|YP_007490289.1| - 9.8e-88 292.9 0.0 1.1e-87 292.6 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin HTH_20 PF12840.2 gi|452210176|ref|YP_007490290.1| - 3.9e-11 42.5 0.0 7e-11 41.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210176|ref|YP_007490290.1| - 2.7e-10 39.7 0.3 4.3e-10 39.1 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|452210176|ref|YP_007490290.1| - 8e-05 22.2 0.0 0.00019 21.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452210176|ref|YP_007490290.1| - 0.00016 20.9 0.1 0.00044 19.5 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|452210176|ref|YP_007490290.1| - 0.00022 20.8 0.2 0.0085 15.7 0.1 2.3 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|452210176|ref|YP_007490290.1| - 0.00031 20.3 0.0 0.00054 19.5 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF4430 PF14478.1 gi|452210176|ref|YP_007490290.1| - 0.0034 17.3 0.7 0.01 15.8 0.5 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) HTH_34 PF13601.1 gi|452210176|ref|YP_007490290.1| - 0.0044 17.0 0.0 0.027 14.4 0.0 2.1 1 1 1 2 2 2 1 Winged helix DNA-binding domain HxlR PF01638.12 gi|452210176|ref|YP_007490290.1| - 0.016 14.8 0.0 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_45 PF14947.1 gi|452210176|ref|YP_007490290.1| - 0.024 14.4 0.0 0.075 12.8 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|452210176|ref|YP_007490290.1| - 0.061 13.4 0.1 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator Nit_Regul_Hom PF10126.4 gi|452210176|ref|YP_007490290.1| - 0.063 13.0 0.2 0.16 11.7 0.1 1.7 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF4423 PF14394.1 gi|452210176|ref|YP_007490290.1| - 0.092 12.2 0.0 0.15 11.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_IclR PF09339.5 gi|452210176|ref|YP_007490290.1| - 0.1 12.1 0.0 0.33 10.5 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.14 gi|452210176|ref|YP_007490290.1| - 0.11 12.4 0.4 0.3 11.0 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF2162 PF09930.4 gi|452210177|ref|YP_007490291.1| - 1.9e-78 262.6 19.1 2.2e-78 262.4 13.2 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) ABC2_membrane_5 PF13346.1 gi|452210177|ref|YP_007490291.1| - 0.17 11.1 22.3 0.9 8.7 4.5 2.2 1 1 1 2 2 2 0 ABC-2 family transporter protein MnhB PF04039.8 gi|452210177|ref|YP_007490291.1| - 2.1 8.4 17.7 0.85 9.6 0.5 3.0 2 1 1 3 3 3 0 Domain related to MnhB subunit of Na+/H+ antiporter MotA_ExbB PF01618.11 gi|452210178|ref|YP_007490292.1| - 4.9e-11 42.4 0.6 8.1e-11 41.6 0.4 1.4 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family VIT1 PF01988.14 gi|452210178|ref|YP_007490292.1| - 7.5e-05 22.3 1.3 0.00017 21.1 0.9 1.6 1 1 0 1 1 1 1 VIT family Spore_III_AB PF09548.5 gi|452210178|ref|YP_007490292.1| - 0.025 14.3 0.3 3.8 7.2 0.1 2.4 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4363 PF14276.1 gi|452210178|ref|YP_007490292.1| - 0.047 13.4 0.1 0.088 12.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) DUF2149 PF09919.4 gi|452210179|ref|YP_007490293.1| - 3.8e-32 110.2 0.2 4.8e-32 109.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) Zip PF02535.17 gi|452210180|ref|YP_007490294.1| - 4.5e-26 91.6 20.9 3.2e-21 75.6 2.2 2.0 2 0 0 2 2 2 2 ZIP Zinc transporter E1-E2_ATPase PF00122.15 gi|452210180|ref|YP_007490294.1| - 0.0096 14.9 0.0 0.022 13.7 0.0 1.6 1 1 0 1 1 1 1 E1-E2 ATPase SnoaL_2 PF12680.2 gi|452210181|ref|YP_007490295.1| - 6.9e-05 23.1 0.0 7.6e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.7 gi|452210181|ref|YP_007490295.1| - 0.0013 18.3 0.0 0.0014 18.2 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase DUF3502 PF12010.3 gi|452210181|ref|YP_007490295.1| - 0.047 13.6 0.1 0.054 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) CobN-Mg_chel PF02514.11 gi|452210182|ref|YP_007490296.1| - 0 1215.9 0.0 0 1215.3 0.0 1.2 1 0 0 1 1 1 1 CobN/Magnesium Chelatase CobN-Mg_chel PF02514.11 gi|452210185|ref|YP_007490299.1| - 0 1277.5 0.1 0 1277.5 0.0 1.5 2 0 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.1 gi|452210185|ref|YP_007490299.1| - 2.8e-05 24.1 0.1 0.00011 22.2 0.1 2.1 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Cna_B PF05738.8 gi|452210185|ref|YP_007490299.1| - 0.00079 19.1 0.1 0.0023 17.6 0.0 1.8 1 0 0 1 1 1 1 Cna protein B-type domain UPF0066 PF01980.11 gi|452210186|ref|YP_007490300.1| - 1.8e-34 118.2 0.0 2.2e-34 118.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0066 FmdE PF02663.9 gi|452210187|ref|YP_007490301.1| - 1.3e-29 102.7 0.0 1.6e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.12 gi|452210187|ref|YP_007490301.1| - 4.9e-06 26.1 0.5 1.1e-05 25.0 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger zf-RING_3 PF14369.1 gi|452210187|ref|YP_007490301.1| - 0.07 13.1 0.3 0.58 10.1 0.0 2.3 2 0 0 2 2 2 0 zinc-finger Auto_anti-p27 PF06677.7 gi|452210187|ref|YP_007490301.1| - 0.11 12.3 1.3 0.23 11.2 0.9 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1936 PF09151.5 gi|452210187|ref|YP_007490301.1| - 0.21 11.1 1.3 0.54 9.7 0.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) TF_Zn_Ribbon PF08271.7 gi|452210187|ref|YP_007490301.1| - 1.1 8.5 4.6 19 4.6 3.2 2.6 1 1 0 1 1 1 0 TFIIB zinc-binding DUF1724 PF08350.5 gi|452210188|ref|YP_007490302.1| - 6.7e-27 92.8 0.0 1.2e-26 92.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|452210188|ref|YP_007490302.1| - 0.14 12.4 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain ABC_tran PF00005.22 gi|452210190|ref|YP_007490304.1| - 7.3e-34 117.0 0.1 1.5e-33 116.0 0.0 1.6 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|452210190|ref|YP_007490304.1| - 1.2e-10 41.8 0.0 3.2e-05 24.0 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452210190|ref|YP_007490304.1| - 8.7e-09 34.9 0.0 1.4e-05 24.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452210190|ref|YP_007490304.1| - 0.00016 21.1 0.1 0.00035 20.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|452210190|ref|YP_007490304.1| - 0.0013 18.4 0.7 0.1 12.3 0.2 2.5 3 0 0 3 3 2 1 Part of AAA domain AAA_16 PF13191.1 gi|452210190|ref|YP_007490304.1| - 0.0014 18.6 1.5 0.0085 16.0 1.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_10 PF12846.2 gi|452210190|ref|YP_007490304.1| - 0.0018 17.8 0.2 0.0079 15.6 0.1 2.0 2 1 0 2 2 2 1 AAA-like domain AAA_22 PF13401.1 gi|452210190|ref|YP_007490304.1| - 0.0039 17.3 0.8 0.019 15.1 0.6 2.0 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|452210190|ref|YP_007490304.1| - 0.0048 16.7 0.1 0.056 13.3 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|452210190|ref|YP_007490304.1| - 0.0052 16.6 0.4 0.037 13.9 0.3 2.1 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|452210190|ref|YP_007490304.1| - 0.0059 15.8 0.1 0.013 14.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|452210190|ref|YP_007490304.1| - 0.01 16.6 0.9 0.018 15.8 0.6 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|452210190|ref|YP_007490304.1| - 0.01 15.2 0.2 0.037 13.4 0.1 1.8 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|452210190|ref|YP_007490304.1| - 0.023 14.1 0.3 1.5 8.2 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family T2SE PF00437.15 gi|452210190|ref|YP_007490304.1| - 0.028 13.3 0.1 0.054 12.3 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.1 gi|452210190|ref|YP_007490304.1| - 0.029 13.9 0.4 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|452210190|ref|YP_007490304.1| - 0.033 14.4 2.7 0.54 10.5 1.9 2.4 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|452210190|ref|YP_007490304.1| - 0.037 13.0 0.0 2.3 7.1 0.0 2.1 1 1 0 2 2 2 0 AAA ATPase domain NB-ARC PF00931.17 gi|452210190|ref|YP_007490304.1| - 0.05 12.4 1.0 2.5 6.8 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain ABC_ATPase PF09818.4 gi|452210190|ref|YP_007490304.1| - 0.058 11.9 0.1 0.57 8.7 0.1 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class IstB_IS21 PF01695.12 gi|452210190|ref|YP_007490304.1| - 0.068 12.5 0.1 0.32 10.3 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein Arch_ATPase PF01637.13 gi|452210190|ref|YP_007490304.1| - 0.073 12.7 0.4 1.5 8.4 0.0 2.1 2 0 0 2 2 2 0 Archaeal ATPase AAA_23 PF13476.1 gi|452210190|ref|YP_007490304.1| - 0.083 13.2 1.8 0.12 12.6 0.2 1.9 2 1 0 2 2 2 0 AAA domain KaiC PF06745.8 gi|452210190|ref|YP_007490304.1| - 0.084 11.9 0.7 3.9 6.5 0.0 2.2 2 0 0 2 2 2 0 KaiC NACHT PF05729.7 gi|452210190|ref|YP_007490304.1| - 0.12 12.0 1.4 0.22 11.1 0.1 2.1 2 2 1 3 3 3 0 NACHT domain DUF87 PF01935.12 gi|452210190|ref|YP_007490304.1| - 0.28 10.9 1.3 0.43 10.3 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function DUF87 MacB_PCD PF12704.2 gi|452210191|ref|YP_007490305.1| - 7.7e-36 123.8 0.6 7.7e-36 123.8 0.4 3.0 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452210191|ref|YP_007490305.1| - 5.6e-23 80.9 19.1 5.6e-23 80.9 10.7 2.3 2 0 0 2 2 2 1 FtsX-like permease family AA_kinase PF00696.23 gi|452210193|ref|YP_007490307.1| - 5.4e-28 98.1 0.5 6.7e-28 97.8 0.3 1.1 1 0 0 1 1 1 1 Amino acid kinase family TetR_N PF00440.18 gi|452210196|ref|YP_007490310.1| - 4.9e-17 61.2 0.0 8e-17 60.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Aldo_ket_red PF00248.16 gi|452210197|ref|YP_007490311.1| - 8.1e-43 146.2 0.0 9.8e-43 145.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|452210197|ref|YP_007490311.1| - 2.2e-12 47.1 6.6 4.6e-12 46.0 4.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210197|ref|YP_007490311.1| - 4.1e-09 36.5 7.4 7.6e-09 35.7 5.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452210197|ref|YP_007490311.1| - 1.1e-07 32.1 0.7 0.00038 20.8 0.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210197|ref|YP_007490311.1| - 2.3e-07 30.7 7.2 4.1e-07 29.9 5.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210197|ref|YP_007490311.1| - 0.00022 20.9 9.0 0.0017 18.0 6.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210197|ref|YP_007490311.1| - 0.0013 18.5 6.4 0.13 12.1 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452210197|ref|YP_007490311.1| - 0.0015 19.2 5.0 0.31 11.8 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|452210197|ref|YP_007490311.1| - 0.0019 17.6 10.2 0.0038 16.7 1.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.1 gi|452210197|ref|YP_007490311.1| - 0.003 17.1 2.9 0.014 15.0 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.2 gi|452210197|ref|YP_007490311.1| - 0.061 13.2 1.1 0.061 13.2 0.8 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain NPR1_like_C PF12313.3 gi|452210197|ref|YP_007490311.1| - 0.16 11.3 0.1 0.75 9.1 0.0 1.9 2 0 0 2 2 2 0 NPR1/NIM1 like defence protein C terminal Fer4_2 PF12797.2 gi|452210197|ref|YP_007490311.1| - 0.31 11.0 12.6 0.94 9.5 1.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452210197|ref|YP_007490311.1| - 0.42 11.0 13.2 1.3 9.5 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452210197|ref|YP_007490311.1| - 0.67 10.3 13.4 5.5 7.4 9.3 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain AIRC PF00731.15 gi|452210198|ref|YP_007490312.1| - 3.7e-22 78.2 2.7 3.7e-22 78.2 1.9 1.6 2 0 0 2 2 2 1 AIR carboxylase DUF111 PF01969.12 gi|452210199|ref|YP_007490313.1| - 2.3e-131 438.1 0.1 2.6e-131 437.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Semialdhyde_dhC PF02774.13 gi|452210200|ref|YP_007490314.1| - 5e-37 127.5 0.0 8.2e-37 126.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 gi|452210200|ref|YP_007490314.1| - 1.1e-34 119.2 0.0 1.7e-34 118.6 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.17 gi|452210200|ref|YP_007490314.1| - 2.4e-05 24.8 0.1 4.3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DXP_reductoisom PF02670.11 gi|452210200|ref|YP_007490314.1| - 0.0023 18.4 0.0 0.0044 17.5 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase NAD_binding_10 PF13460.1 gi|452210200|ref|YP_007490314.1| - 0.0056 16.7 0.1 0.01 15.8 0.1 1.4 1 0 0 1 1 1 1 NADH(P)-binding DapB_N PF01113.15 gi|452210200|ref|YP_007490314.1| - 0.0077 16.1 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_C PF02800.15 gi|452210200|ref|YP_007490314.1| - 0.12 11.7 0.0 0.43 10.0 0.0 1.8 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Fer4 PF00037.22 gi|452210201|ref|YP_007490315.1| - 3.6e-18 64.3 16.9 2e-09 36.6 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452210201|ref|YP_007490315.1| - 5.3e-15 54.9 25.6 2.4e-10 40.0 9.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210201|ref|YP_007490315.1| - 1e-12 48.2 13.6 1.3e-12 47.9 9.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210201|ref|YP_007490315.1| - 1.3e-11 44.5 12.9 1.5e-11 44.3 8.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210201|ref|YP_007490315.1| - 3.2e-11 42.4 15.7 2.8e-06 26.8 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452210201|ref|YP_007490315.1| - 3.3e-11 42.5 16.2 4.2e-06 26.3 3.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210201|ref|YP_007490315.1| - 1.4e-09 38.5 13.3 1.5e-05 25.6 1.0 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452210201|ref|YP_007490315.1| - 4.1e-09 36.1 14.5 1.1e-08 34.8 10.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452210201|ref|YP_007490315.1| - 1.1e-08 34.8 6.2 1.2e-08 34.6 4.3 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452210201|ref|YP_007490315.1| - 8.8e-08 31.8 14.9 0.001 19.2 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452210201|ref|YP_007490315.1| - 1.1e-07 32.0 13.6 8.8e-05 22.7 9.5 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210201|ref|YP_007490315.1| - 2.5e-07 31.1 17.2 0.00013 22.4 2.2 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|452210201|ref|YP_007490315.1| - 3.4e-07 30.1 14.9 1.7e-06 27.9 10.3 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452210201|ref|YP_007490315.1| - 2.5e-06 27.6 20.3 0.0038 17.6 4.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452210201|ref|YP_007490315.1| - 1.2e-05 25.5 19.0 0.0053 17.1 4.4 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|452210201|ref|YP_007490315.1| - 0.00069 19.9 17.7 0.0089 16.4 3.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain HTH_45 PF14947.1 gi|452210202|ref|YP_007490316.1| - 0.018 14.8 0.1 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HemN_C PF06969.11 gi|452210202|ref|YP_007490316.1| - 0.042 13.9 0.1 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 HemN C-terminal domain cobW PF02492.14 gi|452210203|ref|YP_007490317.1| - 7.9e-36 123.1 0.1 1.1e-35 122.7 0.1 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.9 gi|452210203|ref|YP_007490317.1| - 0.00069 19.3 0.0 0.0016 18.1 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|452210203|ref|YP_007490317.1| - 0.0011 17.8 0.9 0.0095 14.7 0.7 2.1 1 1 0 1 1 1 1 ArgK protein Zeta_toxin PF06414.7 gi|452210203|ref|YP_007490317.1| - 0.0018 17.3 0.0 0.0037 16.4 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_18 PF13238.1 gi|452210203|ref|YP_007490317.1| - 0.0056 16.9 0.3 0.034 14.4 0.1 2.2 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.13 gi|452210203|ref|YP_007490317.1| - 0.0074 15.8 0.1 0.015 14.8 0.1 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase GTP_EFTU PF00009.22 gi|452210203|ref|YP_007490317.1| - 0.01 15.3 0.2 3.9 6.8 0.0 3.0 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.4 gi|452210203|ref|YP_007490317.1| - 0.015 13.9 0.3 0.024 13.2 0.2 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.2 gi|452210203|ref|YP_007490317.1| - 0.018 14.4 0.1 0.038 13.4 0.1 1.5 1 0 0 1 1 1 0 AAA-like domain AAA_19 PF13245.1 gi|452210203|ref|YP_007490317.1| - 0.023 14.4 0.0 0.06 13.1 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA_22 PF13401.1 gi|452210203|ref|YP_007490317.1| - 0.025 14.6 0.0 0.1 12.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.17 gi|452210203|ref|YP_007490317.1| - 0.032 13.6 0.1 0.063 12.7 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain LpxK PF02606.9 gi|452210203|ref|YP_007490317.1| - 0.067 12.1 0.0 0.14 11.0 0.0 1.5 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_11 PF13086.1 gi|452210203|ref|YP_007490317.1| - 0.08 12.4 0.4 9.3 5.7 0.1 2.5 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|452210203|ref|YP_007490317.1| - 0.089 12.3 0.1 0.29 10.6 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF3277 PF11681.3 gi|452210206|ref|YP_007490320.1| - 0.15 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3277) MORN_2 PF07661.8 gi|452210207|ref|YP_007490321.1| - 0.028 14.4 0.3 11 6.4 0.0 3.2 2 1 1 3 3 3 0 MORN repeat variant Pput2613-deam PF14427.1 gi|452210207|ref|YP_007490321.1| - 0.11 12.2 2.1 0.17 11.5 0.2 2.3 2 1 1 3 3 3 0 Pput_2613-like deaminase Radical_SAM PF04055.16 gi|452210208|ref|YP_007490322.1| - 4e-09 36.8 0.3 6.9e-09 36.0 0.2 1.4 1 0 0 1 1 1 1 Radical SAM superfamily tRNA_SAD PF07973.9 gi|452210210|ref|YP_007490324.1| - 0.1 12.4 0.0 0.4 10.6 0.0 1.8 1 1 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain DeoC PF01791.4 gi|452210211|ref|YP_007490325.1| - 6.3e-54 182.7 0.0 7.6e-54 182.4 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.19 gi|452210211|ref|YP_007490325.1| - 5.5e-06 25.9 0.0 8e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.9 gi|452210211|ref|YP_007490325.1| - 0.018 14.0 1.2 0.042 12.9 0.2 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Flu_B_M2 PF04772.7 gi|452210211|ref|YP_007490325.1| - 0.11 12.5 0.3 0.29 11.2 0.1 1.8 2 0 0 2 2 2 0 Influenza B matrix protein 2 (BM2) dUTPase PF00692.14 gi|452210212|ref|YP_007490326.1| - 2.3e-11 43.2 0.0 3.3e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.6 gi|452210212|ref|YP_007490326.1| - 0.037 12.4 0.0 0.17 10.2 0.0 1.9 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF2341 PF10102.4 gi|452210214|ref|YP_007490328.1| - 3.5e-26 91.1 0.0 8.6e-26 89.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) FMN_red PF03358.10 gi|452210216|ref|YP_007490330.1| - 3.8e-19 68.6 0.0 4.4e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452210216|ref|YP_007490330.1| - 4.9e-18 65.3 0.0 5.9e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452210216|ref|YP_007490330.1| - 0.022 14.7 0.0 0.031 14.2 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain FMN_red PF03358.10 gi|452210217|ref|YP_007490331.1| - 8.2e-25 87.0 0.0 8.8e-25 86.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452210217|ref|YP_007490331.1| - 9e-20 71.0 0.0 1e-19 70.8 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452210217|ref|YP_007490331.1| - 0.03 14.3 0.0 0.23 11.4 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|452210217|ref|YP_007490331.1| - 0.12 12.3 0.1 8.7 6.3 0.0 2.2 2 1 0 2 2 2 0 Flavodoxin MacB_PCD PF12704.2 gi|452210219|ref|YP_007490333.1| - 9.9e-40 136.5 6.6 9.9e-40 136.5 4.6 2.1 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452210219|ref|YP_007490333.1| - 3.6e-22 78.3 19.3 3.8e-22 78.3 9.5 2.2 2 0 0 2 2 2 1 FtsX-like permease family Toxin_61 PF15538.1 gi|452210219|ref|YP_007490333.1| - 0.068 13.1 0.9 0.15 12.0 0.1 1.9 2 0 0 2 2 2 0 Putative toxin 61 SelR PF01641.13 gi|452210220|ref|YP_007490334.1| - 4e-53 178.3 0.2 4.8e-53 178.1 0.1 1.0 1 0 0 1 1 1 1 SelR domain TF_Zn_Ribbon PF08271.7 gi|452210220|ref|YP_007490334.1| - 0.0019 17.4 0.5 1.7 8.0 0.1 2.6 2 0 0 2 2 2 2 TFIIB zinc-binding DUF2296 PF10058.4 gi|452210220|ref|YP_007490334.1| - 0.0022 17.6 1.1 0.081 12.6 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane metal-binding protein (DUF2296) DUF2318 PF10080.4 gi|452210220|ref|YP_007490334.1| - 0.011 15.4 0.8 4.2 7.1 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf-ribbon_3 PF13248.1 gi|452210220|ref|YP_007490334.1| - 0.012 14.7 2.4 2.7 7.2 0.4 2.5 2 1 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|452210220|ref|YP_007490334.1| - 0.014 14.8 5.0 0.033 13.6 0.2 2.5 3 0 0 3 3 3 0 A2L zinc ribbon domain GFA PF04828.9 gi|452210220|ref|YP_007490334.1| - 0.018 14.9 1.0 4 7.4 0.0 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF2082 PF09855.4 gi|452210220|ref|YP_007490334.1| - 0.022 14.6 0.3 0.27 11.0 0.0 2.1 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DUF678 PF05077.7 gi|452210220|ref|YP_007490334.1| - 0.023 14.6 0.1 5.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) DZR PF12773.2 gi|452210220|ref|YP_007490334.1| - 0.032 14.0 1.0 0.23 11.3 0.7 2.2 1 1 0 1 1 1 0 Double zinc ribbon Yippee-Mis18 PF03226.9 gi|452210220|ref|YP_007490334.1| - 0.037 14.0 0.6 0.15 12.0 0.4 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zinc_ribbon_2 PF13240.1 gi|452210220|ref|YP_007490334.1| - 0.045 13.2 0.9 3.3 7.2 0.0 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|452210220|ref|YP_007490334.1| - 0.091 12.5 2.2 6.8 6.5 0.2 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain HNH_5 PF14279.1 gi|452210220|ref|YP_007490334.1| - 0.11 12.4 0.0 0.64 10.0 0.0 2.0 2 0 0 2 2 2 0 HNH endonuclease Ribosomal_L37e PF01907.14 gi|452210220|ref|YP_007490334.1| - 0.18 11.6 1.0 18 5.2 0.1 2.4 2 0 0 2 2 2 0 Ribosomal protein L37e zf-NADH-PPase PF09297.6 gi|452210220|ref|YP_007490334.1| - 1.6 8.3 4.3 20 4.7 0.6 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Acyl_transf_3 PF01757.17 gi|452210221|ref|YP_007490335.1| - 0.063 12.0 6.5 0.056 12.2 4.5 1.0 1 0 0 1 1 1 0 Acyltransferase family DUF2569 PF10754.4 gi|452210221|ref|YP_007490335.1| - 0.092 12.9 0.1 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) HAD_2 PF13419.1 gi|452210222|ref|YP_007490336.1| - 6.2e-28 98.2 0.0 7.5e-28 97.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452210222|ref|YP_007490336.1| - 1.6e-10 41.7 0.0 1.2e-09 38.9 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452210222|ref|YP_007490336.1| - 7.4e-08 32.0 0.0 1.5e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|452210222|ref|YP_007490336.1| - 6.9e-07 29.6 0.0 8.2e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.13 gi|452210222|ref|YP_007490336.1| - 0.00028 20.5 0.0 0.0076 15.9 0.0 2.2 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase NT5C PF06941.7 gi|452210222|ref|YP_007490336.1| - 0.023 14.2 0.2 0.054 13.0 0.1 1.7 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.1 gi|452210222|ref|YP_007490336.1| - 0.13 12.1 0.0 1.4 8.8 0.0 2.6 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Glyco_trans_1_3 PF13528.1 gi|452210223|ref|YP_007490337.1| - 1e-31 110.3 0.0 3.1e-17 62.7 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|452210223|ref|YP_007490337.1| - 1.2e-12 47.8 0.0 2e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.15 gi|452210223|ref|YP_007490337.1| - 6.9e-08 32.3 0.0 3.5e-07 30.0 0.0 2.1 2 1 1 3 3 3 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_4_2 PF13477.1 gi|452210223|ref|YP_007490337.1| - 3e-06 27.0 0.0 8.4e-06 25.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like UDPGT PF00201.13 gi|452210223|ref|YP_007490337.1| - 4.1e-06 25.6 0.0 0.00021 19.9 0.0 2.0 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.1 gi|452210223|ref|YP_007490337.1| - 7.1e-05 22.9 0.0 0.00015 21.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452210223|ref|YP_007490337.1| - 0.00047 20.3 0.0 0.00079 19.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|452210223|ref|YP_007490337.1| - 0.0008 18.8 0.0 0.0016 17.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452210223|ref|YP_007490337.1| - 0.079 12.6 0.0 1.8 8.2 0.0 2.1 1 1 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_2 PF00535.21 gi|452210224|ref|YP_007490338.1| - 3e-26 92.0 0.0 5e-26 91.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452210224|ref|YP_007490338.1| - 1e-06 28.7 0.0 1.2e-06 28.5 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452210224|ref|YP_007490338.1| - 0.00011 22.3 0.0 0.00023 21.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|452210224|ref|YP_007490338.1| - 0.0061 15.8 0.0 0.0098 15.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 PGM_PMM_II PF02879.11 gi|452210224|ref|YP_007490338.1| - 0.023 14.9 0.0 0.11 12.8 0.0 2.0 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Cys_Met_Meta_PP PF01053.15 gi|452210224|ref|YP_007490338.1| - 0.16 10.2 0.0 0.25 9.6 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme RseC_MucC PF04246.7 gi|452210224|ref|YP_007490338.1| - 0.18 11.3 1.1 0.33 10.5 0.8 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Hexapep PF00132.19 gi|452210225|ref|YP_007490339.1| - 2.5e-11 42.5 8.5 2.2e-08 33.2 0.7 3.7 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452210225|ref|YP_007490339.1| - 6.2e-06 25.6 4.4 0.0029 17.1 0.6 3.0 2 2 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF3473 PF11959.3 gi|452210226|ref|YP_007490340.1| - 4.8e-32 110.1 0.1 6.5e-32 109.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.16 gi|452210226|ref|YP_007490340.1| - 4.4e-26 90.9 0.0 7.6e-26 90.1 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.10 gi|452210226|ref|YP_007490340.1| - 6.9e-05 21.9 0.0 0.00012 21.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glycos_transf_1 PF00534.15 gi|452210228|ref|YP_007490342.1| - 1.1e-30 106.2 0.2 1.7e-30 105.7 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452210228|ref|YP_007490342.1| - 2.4e-13 50.3 0.0 1.2e-12 48.1 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|452210228|ref|YP_007490342.1| - 3.5e-06 27.2 0.0 8.9e-06 25.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|452210228|ref|YP_007490342.1| - 0.0037 17.1 0.1 0.0085 15.9 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|452210228|ref|YP_007490342.1| - 0.2 11.7 0.0 0.34 11.0 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain DUF2206 PF09971.4 gi|452210229|ref|YP_007490343.1| - 8.8e-33 113.6 40.5 8.8e-33 113.6 28.1 3.8 2 2 1 3 3 3 1 Predicted membrane protein (DUF2206) DUF1616 PF07760.6 gi|452210229|ref|YP_007490343.1| - 1.8e-29 102.7 25.8 1.8e-29 102.7 17.9 2.6 3 1 0 4 4 4 1 Protein of unknown function (DUF1616) Polysacc_synt PF01943.12 gi|452210230|ref|YP_007490344.1| - 1.2e-10 41.1 41.0 1.2e-10 41.1 28.4 2.3 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|452210230|ref|YP_007490344.1| - 7.1e-08 32.3 10.1 7.1e-08 32.3 7.0 4.7 2 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|452210230|ref|YP_007490344.1| - 8.9e-07 28.6 55.2 0.00039 19.9 19.2 2.1 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Frag1 PF10277.4 gi|452210231|ref|YP_007490345.1| - 0.033 13.6 1.0 0.034 13.6 0.7 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family Methyltransf_11 PF08241.7 gi|452210232|ref|YP_007490346.1| - 9.4e-20 70.9 0.0 1.9e-19 69.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210232|ref|YP_007490346.1| - 4.4e-16 59.0 0.0 6.7e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210232|ref|YP_007490346.1| - 2.9e-12 46.4 0.1 9.1e-12 44.8 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210232|ref|YP_007490346.1| - 6.3e-11 42.6 0.0 1.8e-10 41.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210232|ref|YP_007490346.1| - 1.7e-08 35.0 0.0 4.5e-08 33.6 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210232|ref|YP_007490346.1| - 4.2e-07 30.2 0.0 7.9e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|452210232|ref|YP_007490346.1| - 2.9e-06 26.3 0.0 4.3e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.7 gi|452210232|ref|YP_007490346.1| - 1.1e-05 24.8 0.0 1.7e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.11 gi|452210232|ref|YP_007490346.1| - 1.4e-05 23.6 0.1 2.8e-05 22.6 0.0 1.6 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Ubie_methyltran PF01209.13 gi|452210232|ref|YP_007490346.1| - 0.00012 21.2 0.0 0.00017 20.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Trm112p PF03966.11 gi|452210232|ref|YP_007490346.1| - 0.0034 17.6 0.4 0.0078 16.5 0.3 1.6 1 0 0 1 1 1 1 Trm112p-like protein MTS PF05175.9 gi|452210232|ref|YP_007490346.1| - 0.012 14.9 0.0 0.023 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|452210232|ref|YP_007490346.1| - 0.047 13.7 0.0 0.1 12.6 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|452210232|ref|YP_007490346.1| - 0.1 11.9 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF362 PF04015.7 gi|452210233|ref|YP_007490347.1| - 1.3e-16 60.7 0.0 1.9e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF362) SDF PF00375.13 gi|452210234|ref|YP_007490348.1| - 0.066 11.9 4.2 0.075 11.7 2.9 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family YibE_F PF07907.6 gi|452210234|ref|YP_007490348.1| - 0.085 12.0 4.4 0.09 11.9 3.1 1.0 1 0 0 1 1 1 0 YibE/F-like protein Transport_MerF PF11431.3 gi|452210234|ref|YP_007490348.1| - 0.1 12.2 0.1 0.1 12.2 0.1 1.6 2 0 0 2 2 2 0 Membrane transport protein MerF Glucos_trans_II PF14264.1 gi|452210234|ref|YP_007490348.1| - 0.11 11.5 3.3 0.12 11.3 2.3 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII MtaB PF12176.3 gi|452210235|ref|YP_007490349.1| - 1.7e-253 841.0 5.0 2e-253 840.8 3.5 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit B12-binding PF02310.14 gi|452210236|ref|YP_007490350.1| - 1.4e-18 66.8 0.2 2.3e-18 66.1 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452210236|ref|YP_007490350.1| - 1.4e-13 50.6 0.6 4e-13 49.1 0.1 2.0 2 0 0 2 2 2 1 B12 binding domain DUF1724 PF08350.5 gi|452210238|ref|YP_007490352.1| - 2.6e-24 84.4 0.2 7.4e-24 83.0 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_45 PF14947.1 gi|452210238|ref|YP_007490352.1| - 0.0042 16.8 0.0 0.0092 15.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|452210238|ref|YP_007490352.1| - 0.012 15.9 0.0 0.021 15.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1724 PF08350.5 gi|452210239|ref|YP_007490353.1| - 4.9e-28 96.4 0.3 8.7e-28 95.6 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452210239|ref|YP_007490353.1| - 0.00024 20.7 0.3 0.0004 19.9 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|452210239|ref|YP_007490353.1| - 0.00054 19.6 0.1 0.0012 18.5 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|452210239|ref|YP_007490353.1| - 0.001 19.3 0.1 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|452210239|ref|YP_007490353.1| - 0.014 15.0 0.3 0.025 14.1 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.2 gi|452210239|ref|YP_007490353.1| - 0.02 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|452210239|ref|YP_007490353.1| - 0.027 13.8 0.3 0.051 12.9 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF4423 PF14394.1 gi|452210239|ref|YP_007490353.1| - 0.048 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|452210239|ref|YP_007490353.1| - 0.059 13.1 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix Sin3_corepress PF08295.7 gi|452210239|ref|YP_007490353.1| - 0.083 12.6 0.3 0.18 11.5 0.1 1.6 2 0 0 2 2 2 0 Sin3 family co-repressor MarR PF01047.17 gi|452210239|ref|YP_007490353.1| - 0.12 12.1 0.1 0.26 11.0 0.1 1.5 1 0 0 1 1 1 0 MarR family UDG PF03167.14 gi|452210240|ref|YP_007490354.1| - 0.0026 17.2 0.0 0.003 17.0 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Fer4 PF00037.22 gi|452210241|ref|YP_007490355.1| - 7.5e-18 63.3 21.8 7.6e-09 34.8 4.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452210241|ref|YP_007490355.1| - 2.7e-14 53.1 30.8 3.8e-10 39.8 11.6 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210241|ref|YP_007490355.1| - 5.1e-12 45.4 30.5 1.9e-08 34.0 12.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210241|ref|YP_007490355.1| - 1.1e-10 41.7 16.9 1.2e-10 41.6 11.3 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210241|ref|YP_007490355.1| - 1.5e-10 40.4 21.7 2.4e-05 23.9 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452210241|ref|YP_007490355.1| - 2.5e-10 40.2 7.9 3.3e-05 23.8 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210241|ref|YP_007490355.1| - 1.2e-09 37.8 16.7 2e-09 37.0 11.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210241|ref|YP_007490355.1| - 4e-09 35.8 21.9 3.6e-05 23.4 2.9 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452210241|ref|YP_007490355.1| - 4.3e-08 33.4 11.1 0.00081 19.7 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452210241|ref|YP_007490355.1| - 6e-08 32.3 15.8 0.0013 18.9 2.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210241|ref|YP_007490355.1| - 2.6e-06 28.0 28.0 0.0032 18.1 2.4 2.5 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_11 PF13247.1 gi|452210241|ref|YP_007490355.1| - 3e-06 27.0 8.0 4.4e-06 26.4 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452210241|ref|YP_007490355.1| - 1.1e-05 25.5 21.9 0.0087 16.5 4.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452210241|ref|YP_007490355.1| - 9.8e-05 22.8 22.2 0.001 19.5 4.9 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452210241|ref|YP_007490355.1| - 0.00017 21.8 17.3 0.029 14.7 3.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452210241|ref|YP_007490355.1| - 0.0003 21.1 20.8 0.039 14.3 4.0 2.9 2 1 0 2 2 2 2 4Fe-4S single cluster domain Tetraspannin PF00335.15 gi|452210241|ref|YP_007490355.1| - 0.24 10.6 2.9 0.29 10.3 2.0 1.1 1 0 0 1 1 1 0 Tetraspanin family Glycos_transf_2 PF00535.21 gi|452210243|ref|YP_007490357.1| - 8e-35 120.0 0.1 3e-34 118.1 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452210243|ref|YP_007490357.1| - 8.1e-29 101.0 0.0 1.3e-28 100.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|452210243|ref|YP_007490357.1| - 2.4e-21 76.3 0.6 7.4e-21 74.7 0.4 1.9 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 gi|452210243|ref|YP_007490357.1| - 1.3e-12 47.3 0.1 5e-12 45.4 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|452210243|ref|YP_007490357.1| - 3.9e-09 36.0 0.0 6.6e-09 35.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 DUF2334 PF10096.4 gi|452210243|ref|YP_007490357.1| - 0.00013 21.4 0.0 0.00045 19.7 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_deac_1 PF01522.16 gi|452210243|ref|YP_007490357.1| - 0.00046 19.8 0.0 0.0013 18.3 0.0 1.8 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_tranf_2_5 PF13712.1 gi|452210243|ref|YP_007490357.1| - 0.0038 16.4 0.2 0.018 14.2 0.2 2.2 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_tranf_2_4 PF13704.1 gi|452210243|ref|YP_007490357.1| - 0.007 16.6 0.0 0.036 14.3 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 2 TPR_14 PF13428.1 gi|452210244|ref|YP_007490358.1| - 0.001 19.5 0.2 2.2 9.1 0.0 5.6 6 1 1 7 7 7 1 Tetratricopeptide repeat SWIM PF04434.12 gi|452210244|ref|YP_007490358.1| - 0.0039 16.6 0.2 0.0073 15.7 0.2 1.4 1 0 0 1 1 1 1 SWIM zinc finger PUA PF01472.15 gi|452210244|ref|YP_007490358.1| - 0.022 14.4 0.1 0.058 13.1 0.0 1.7 1 0 0 1 1 1 0 PUA domain Death PF00531.17 gi|452210244|ref|YP_007490358.1| - 0.057 13.1 4.2 1.2 8.9 0.0 4.5 4 1 1 5 5 5 0 Death domain DUF4378 PF14309.1 gi|452210244|ref|YP_007490358.1| - 0.063 13.3 2.8 2 8.4 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4378) 4HB_MCP_1 PF12729.2 gi|452210244|ref|YP_007490358.1| - 0.79 9.0 7.0 0.57 9.5 2.4 2.6 2 1 1 3 3 3 0 Four helix bundle sensory module for signal transduction AAA_33 PF13671.1 gi|452210245|ref|YP_007490359.1| - 9.9e-17 61.1 0.0 2.3e-16 59.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain Metallophos PF00149.23 gi|452210245|ref|YP_007490359.1| - 3.1e-08 33.2 0.0 8.2e-08 31.8 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase KTI12 PF08433.5 gi|452210245|ref|YP_007490359.1| - 0.0013 18.0 0.0 0.0022 17.2 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_17 PF13207.1 gi|452210245|ref|YP_007490359.1| - 0.039 14.7 0.1 0.082 13.7 0.1 1.8 1 1 0 1 1 1 0 AAA domain MCPsignal PF00015.16 gi|452210246|ref|YP_007490360.1| - 2.4e-28 99.1 48.7 1.7e-26 93.0 21.7 4.2 1 1 2 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|452210246|ref|YP_007490360.1| - 1.7e-23 82.9 0.1 1e-10 41.9 0.0 2.8 3 0 0 3 3 2 2 PAS domain PAS_3 PF08447.6 gi|452210246|ref|YP_007490360.1| - 8.8e-18 64.1 0.0 4.8e-17 61.8 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.5 gi|452210246|ref|YP_007490360.1| - 9.4e-15 54.6 0.0 2.5e-08 33.9 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|452210246|ref|YP_007490360.1| - 4.5e-13 48.9 0.0 2.1e-07 30.7 0.0 2.8 2 0 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|452210246|ref|YP_007490360.1| - 0.00012 22.0 0.0 0.0069 16.3 0.0 2.6 2 0 0 2 2 2 1 PAS domain HAMP PF00672.20 gi|452210246|ref|YP_007490360.1| - 0.0011 19.0 1.3 0.5 10.5 0.0 4.3 4 1 1 5 5 5 1 HAMP domain PAS_8 PF13188.1 gi|452210246|ref|YP_007490360.1| - 0.013 15.3 0.0 0.18 11.7 0.0 2.5 2 0 0 2 2 2 0 PAS domain PAS_10 PF13596.1 gi|452210246|ref|YP_007490360.1| - 0.035 14.3 0.9 0.91 9.8 0.0 3.4 4 0 0 4 4 4 0 PAS domain Vps53_N PF04100.7 gi|452210246|ref|YP_007490360.1| - 0.057 12.1 26.3 0.59 8.8 2.1 3.8 2 1 1 3 3 3 0 Vps53-like, N-terminal BSP PF04450.7 gi|452210246|ref|YP_007490360.1| - 0.11 11.9 5.0 1.3 8.3 0.1 2.6 2 0 0 2 2 2 0 Peptidase of plants and bacteria DUF552 PF04472.7 gi|452210246|ref|YP_007490360.1| - 0.26 11.2 3.1 4.6 7.2 0.0 3.7 3 1 1 4 4 3 0 Protein of unknown function (DUF552) CK2S PF15011.1 gi|452210246|ref|YP_007490360.1| - 0.39 10.4 8.7 0.16 11.7 0.3 3.1 2 2 1 3 3 3 0 Casein Kinase 2 substrate CorA PF01544.13 gi|452210246|ref|YP_007490360.1| - 1.2 8.1 11.1 2.5 7.0 0.1 3.6 2 1 2 4 4 4 0 CorA-like Mg2+ transporter protein DUF948 PF06103.6 gi|452210246|ref|YP_007490360.1| - 1.4 8.8 23.8 2 8.3 0.8 5.2 3 3 1 4 4 4 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.6 gi|452210246|ref|YP_007490360.1| - 2.3 6.7 26.7 1.6 7.3 3.5 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein Laminin_II PF06009.7 gi|452210246|ref|YP_007490360.1| - 4 7.1 31.0 0.69 9.6 2.7 4.7 2 2 3 5 5 5 0 Laminin Domain II Ufd2P_core PF10408.4 gi|452210246|ref|YP_007490360.1| - 8.7 4.4 11.7 0.48 8.6 1.5 2.4 2 1 0 2 2 2 0 Ubiquitin elongating factor core MgtE PF01769.11 gi|452210249|ref|YP_007490363.1| - 2.1e-27 96.0 7.4 4.2e-27 95.0 5.2 1.5 1 0 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.12 gi|452210249|ref|YP_007490363.1| - 9.6e-25 86.8 1.1 5.5e-24 84.4 0.2 2.2 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.23 gi|452210249|ref|YP_007490363.1| - 2e-09 37.0 0.1 0.00035 20.3 0.1 2.6 2 0 0 2 2 2 2 CBS domain N6_Mtase PF02384.11 gi|452210250|ref|YP_007490364.1| - 4.7e-69 232.8 0.0 6.8e-69 232.3 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|452210250|ref|YP_007490364.1| - 1.4e-14 54.7 0.2 1.5e-13 51.3 0.0 2.7 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|452210250|ref|YP_007490364.1| - 1.7e-10 40.9 0.0 3.3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452210250|ref|YP_007490364.1| - 8.8e-05 22.1 0.0 0.00025 20.6 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.6 gi|452210250|ref|YP_007490364.1| - 0.00058 20.1 0.1 0.0034 17.7 0.0 2.2 2 0 0 2 2 2 1 Eco57I restriction-modification methylase MTS PF05175.9 gi|452210250|ref|YP_007490364.1| - 0.011 15.0 0.0 0.37 10.1 0.0 2.5 2 1 0 2 2 2 0 Methyltransferase small domain Pga1 PF10333.4 gi|452210251|ref|YP_007490365.1| - 0.02 14.5 0.2 0.037 13.6 0.1 1.4 1 0 0 1 1 1 0 GPI-Mannosyltransferase II co-activator PocR PF10114.4 gi|452210252|ref|YP_007490366.1| - 7.4e-69 230.3 0.0 3.4e-68 228.1 0.0 2.1 2 1 1 3 3 3 1 Sensory domain found in PocR HisKA_2 PF07568.7 gi|452210252|ref|YP_007490366.1| - 4.8e-33 112.8 1.0 4.8e-33 112.8 0.7 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|452210252|ref|YP_007490366.1| - 4.3e-32 110.0 3.1 5.6e-15 55.2 0.1 4.3 4 0 0 4 4 4 3 PAS fold PAS_9 PF13426.1 gi|452210252|ref|YP_007490366.1| - 5.7e-22 78.0 1.5 4e-14 52.8 0.0 3.9 3 1 1 4 4 4 3 PAS domain PAS PF00989.19 gi|452210252|ref|YP_007490366.1| - 3.6e-19 68.6 0.0 4.6e-14 52.1 0.0 3.7 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|452210252|ref|YP_007490366.1| - 1.9e-18 66.5 0.0 1.7e-11 44.1 0.0 3.5 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.1 gi|452210252|ref|YP_007490366.1| - 5.5e-06 26.0 0.0 2.4e-05 24.0 0.0 2.1 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.9 gi|452210252|ref|YP_007490366.1| - 0.0012 19.2 0.8 0.0031 17.9 0.1 2.0 2 0 0 2 2 2 1 HWE histidine kinase DUF4463 PF14703.1 gi|452210252|ref|YP_007490366.1| - 0.42 11.1 3.8 16 6.0 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4463) Methyltransf_11 PF08241.7 gi|452210253|ref|YP_007490367.1| - 4.2e-18 65.6 0.0 7.1e-18 64.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210253|ref|YP_007490367.1| - 0.0006 18.9 0.0 0.00072 18.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|452210253|ref|YP_007490367.1| - 0.00069 19.3 0.0 0.0014 18.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210253|ref|YP_007490367.1| - 0.00072 19.1 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210253|ref|YP_007490367.1| - 0.0012 19.1 0.0 0.0019 18.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210253|ref|YP_007490367.1| - 0.0029 18.0 0.0 0.0046 17.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|452210253|ref|YP_007490367.1| - 0.054 13.1 0.0 0.094 12.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF268 PF03269.9 gi|452210253|ref|YP_007490367.1| - 0.084 12.4 0.1 0.2 11.2 0.1 1.7 1 1 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF268 CMAS PF02353.15 gi|452210253|ref|YP_007490367.1| - 0.13 11.2 0.2 0.23 10.4 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DsbC_N PF10411.4 gi|452210253|ref|YP_007490367.1| - 0.14 11.4 0.0 0.25 10.6 0.0 1.4 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus Mac PF12464.3 gi|452210254|ref|YP_007490368.1| - 1.3e-15 57.1 0.3 2e-15 56.5 0.2 1.3 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.19 gi|452210254|ref|YP_007490368.1| - 3.5e-14 51.5 13.5 7.5e-11 41.0 4.2 3.3 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452210254|ref|YP_007490368.1| - 5.9e-12 44.9 8.1 1.4e-10 40.5 2.8 2.5 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Tachystatin_B PF11478.3 gi|452210257|ref|YP_007490371.1| - 0.24 11.1 1.6 3 7.6 0.2 2.2 1 1 1 2 2 2 0 Antimicrobial chitin binding protein tachystatin B DUF3973 PF13119.1 gi|452210257|ref|YP_007490371.1| - 0.55 10.1 4.2 4.7 7.2 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3973) Ala_racemase_N PF01168.15 gi|452210258|ref|YP_007490372.1| - 7.1e-42 143.4 0.0 8.1e-42 143.2 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Uteroglobin PF01099.12 gi|452210258|ref|YP_007490372.1| - 0.024 14.4 0.0 0.2 11.4 0.0 2.3 2 0 0 2 2 2 0 Uteroglobin family Lactamase_B PF00753.22 gi|452210259|ref|YP_007490373.1| - 5e-08 32.8 3.5 1.9e-07 30.9 2.4 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452210259|ref|YP_007490373.1| - 0.00035 20.1 0.1 0.00055 19.5 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactonase PF10282.4 gi|452210260|ref|YP_007490374.1| - 1.2e-17 63.9 9.0 7.8e-07 28.4 0.4 4.5 2 1 1 4 4 4 3 Lactonase, 7-bladed beta-propeller PKD PF00801.15 gi|452210260|ref|YP_007490374.1| - 7.7e-14 51.1 4.7 4.6e-13 48.6 3.2 2.5 1 0 0 1 1 1 1 PKD domain Cytochrom_D1 PF02239.11 gi|452210260|ref|YP_007490374.1| - 7.9e-12 44.1 9.7 4.1e-06 25.3 0.2 4.0 2 2 1 3 3 3 3 Cytochrome D1 heme domain Inhibitor_I42 PF09394.5 gi|452210260|ref|YP_007490374.1| - 1.3e-10 41.4 0.1 5.7e-10 39.3 0.0 2.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 NHL PF01436.16 gi|452210260|ref|YP_007490374.1| - 1.1e-09 37.7 20.5 0.34 10.9 0.0 6.9 6 0 0 6 6 6 5 NHL repeat PD40 PF07676.7 gi|452210260|ref|YP_007490374.1| - 2.9e-05 23.6 16.0 3.8 7.2 0.0 8.7 9 1 0 9 9 9 1 WD40-like Beta Propeller Repeat Kelch_4 PF13418.1 gi|452210260|ref|YP_007490374.1| - 0.00025 20.7 3.8 0.35 10.6 0.0 6.2 7 0 0 7 7 7 1 Galactose oxidase, central domain Arylesterase PF01731.15 gi|452210260|ref|YP_007490374.1| - 0.00076 19.4 22.0 1.1 9.2 0.0 7.5 3 2 5 8 8 8 2 Arylesterase DUF4102 PF13356.1 gi|452210260|ref|YP_007490374.1| - 0.0014 18.4 0.0 7 6.6 0.0 4.6 1 1 3 4 4 4 1 Domain of unknown function (DUF4102) Peptidase_S68 PF10461.4 gi|452210260|ref|YP_007490374.1| - 0.041 13.5 0.0 0.071 12.8 0.0 1.4 1 0 0 1 1 1 0 Peptidase S68 DUF295 PF03478.13 gi|452210260|ref|YP_007490374.1| - 0.54 9.6 9.2 5 6.5 0.0 4.6 6 0 0 6 6 6 0 Protein of unknown function (DUF295) DEDD_Tnp_IS110 PF01548.12 gi|452210261|ref|YP_007490375.1| - 3.6e-27 94.8 0.1 4.1e-27 94.6 0.1 1.0 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|452210261|ref|YP_007490375.1| - 0.0079 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Orthopoxvirus F14 protein TP_methylase PF00590.15 gi|452210262|ref|YP_007490376.1| - 5.9e-27 94.7 0.0 1.2e-26 93.6 0.0 1.5 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.12 gi|452210263|ref|YP_007490377.1| - 7.7e-53 179.1 1.4 1.2e-52 178.5 1.0 1.3 1 0 0 1 1 1 1 CbiD DNA_mis_repair PF01119.14 gi|452210264|ref|YP_007490378.1| - 6.5e-39 132.0 0.0 1.2e-38 131.1 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.6 gi|452210264|ref|YP_007490378.1| - 2.3e-37 127.8 0.0 5.7e-37 126.5 0.0 1.7 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.1 gi|452210264|ref|YP_007490378.1| - 1e-14 54.3 0.1 1e-14 54.3 0.1 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|452210264|ref|YP_007490378.1| - 9.9e-11 41.3 0.2 2.8e-10 39.9 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MutS_V PF00488.16 gi|452210265|ref|YP_007490379.1| - 7e-101 336.5 0.0 1.3e-100 335.6 0.0 1.5 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.13 gi|452210265|ref|YP_007490379.1| - 2.6e-48 164.5 0.8 4.4e-48 163.7 0.2 1.7 2 0 0 2 2 2 1 MutS domain III MutS_I PF01624.15 gi|452210265|ref|YP_007490379.1| - 5.9e-45 151.9 0.0 2.1e-44 150.1 0.0 1.9 2 0 0 2 2 2 1 MutS domain I MutS_IV PF05190.13 gi|452210265|ref|YP_007490379.1| - 5.3e-32 109.8 0.4 1.8e-31 108.1 0.3 2.0 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.12 gi|452210265|ref|YP_007490379.1| - 8.9e-23 80.8 0.0 3.9e-22 78.8 0.0 2.2 2 0 0 2 2 2 1 MutS domain II AAA_29 PF13555.1 gi|452210265|ref|YP_007490379.1| - 0.0078 15.7 0.0 0.018 14.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rotamase_2 PF13145.1 gi|452210265|ref|YP_007490379.1| - 0.076 13.6 0.2 6.8 7.3 0.2 2.9 3 0 0 3 3 3 0 PPIC-type PPIASE domain TLV_coat PF00429.14 gi|452210265|ref|YP_007490379.1| - 0.23 9.8 0.0 0.33 9.3 0.0 1.1 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) Acyl_transf_3 PF01757.17 gi|452210266|ref|YP_007490380.1| - 3e-25 88.7 35.0 5.2e-25 87.9 24.3 1.4 1 1 0 1 1 1 1 Acyltransferase family SCFA_trans PF02667.9 gi|452210266|ref|YP_007490380.1| - 0.023 13.4 6.6 0.12 11.0 1.6 2.2 2 0 0 2 2 2 0 Short chain fatty acid transporter CDP-OH_P_transf PF01066.16 gi|452210267|ref|YP_007490381.1| - 1e-11 45.0 4.8 2.3e-11 43.8 3.3 1.7 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase GerA PF03323.8 gi|452210267|ref|YP_007490381.1| - 0.28 9.2 1.2 0.37 8.8 0.8 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein CCG PF02754.11 gi|452210269|ref|YP_007490383.1| - 6.7e-31 106.1 2.6 1.5e-14 53.7 0.1 2.4 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.1 gi|452210269|ref|YP_007490383.1| - 3.6e-08 33.0 3.7 3.6e-08 33.0 2.6 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210269|ref|YP_007490383.1| - 1.6e-07 31.2 4.8 1.6e-07 31.2 3.3 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452210269|ref|YP_007490383.1| - 4.5e-06 26.9 11.9 5.9e-06 26.5 4.8 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210269|ref|YP_007490383.1| - 1.1e-05 25.5 12.4 0.029 14.6 1.7 3.9 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210269|ref|YP_007490383.1| - 0.0004 20.1 9.0 0.0014 18.4 0.6 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452210269|ref|YP_007490383.1| - 0.00042 20.0 1.5 0.00042 20.0 1.0 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.22 gi|452210269|ref|YP_007490383.1| - 0.00043 19.7 12.1 0.0035 16.8 2.2 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452210269|ref|YP_007490383.1| - 0.0012 19.1 4.2 0.32 11.4 0.1 3.0 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452210269|ref|YP_007490383.1| - 0.0025 18.5 12.4 0.015 16.0 0.1 3.3 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|452210269|ref|YP_007490383.1| - 0.0032 17.6 10.6 0.0086 16.3 0.7 3.8 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452210269|ref|YP_007490383.1| - 0.0048 17.2 15.8 0.018 15.4 0.1 3.6 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210269|ref|YP_007490383.1| - 0.0069 16.7 12.8 0.0069 16.7 8.9 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210269|ref|YP_007490383.1| - 0.014 15.9 6.9 1.3 9.6 0.5 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452210269|ref|YP_007490383.1| - 0.23 12.1 29.2 0.25 12.0 2.3 4.6 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452210269|ref|YP_007490383.1| - 0.66 9.8 18.4 0.054 13.3 7.5 3.0 3 1 0 3 3 3 0 4Fe-4S dicluster domain B12-binding PF02310.14 gi|452210270|ref|YP_007490384.1| - 2.1e-26 92.1 0.2 2.6e-26 91.8 0.1 1.1 1 0 0 1 1 1 1 B12 binding domain SpoVAD PF07451.6 gi|452210270|ref|YP_007490384.1| - 0.068 11.6 0.0 0.074 11.4 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) MTTB PF06253.6 gi|452210271|ref|YP_007490385.1| - 6.2e-56 189.1 0.0 7.5e-56 188.9 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B12-binding PF02310.14 gi|452210272|ref|YP_007490386.1| - 2.6e-22 78.9 0.3 5.1e-22 77.9 0.2 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452210272|ref|YP_007490386.1| - 2.4e-18 65.9 0.8 2.4e-18 65.9 0.5 2.0 3 0 0 3 3 3 1 B12 binding domain EamA PF00892.15 gi|452210273|ref|YP_007490387.1| - 7.2e-11 42.2 45.5 1.8e-07 31.2 9.3 3.8 4 2 1 5 5 5 2 EamA-like transporter family EmrE PF13536.1 gi|452210273|ref|YP_007490387.1| - 2.1e-10 40.8 9.9 2.1e-10 40.8 6.9 3.6 3 1 0 3 3 3 2 Multidrug resistance efflux transporter SepZ PF06066.6 gi|452210273|ref|YP_007490387.1| - 6.6 6.8 9.3 9.6 6.2 1.6 3.1 2 2 1 3 3 3 0 SepZ DUF1440 PF07274.7 gi|452210273|ref|YP_007490387.1| - 9.2 6.2 8.4 1.1 9.2 1.5 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1440) Dimeth_Pyl PF09505.5 gi|452210276|ref|YP_007490390.1| - 1.4e-30 106.0 0.1 1.5e-30 105.9 0.1 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) PepSY PF03413.14 gi|452210277|ref|YP_007490391.1| - 4.2e-21 75.3 6.3 4.2e-10 40.1 0.2 2.3 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain PepSY_2 PF13670.1 gi|452210277|ref|YP_007490391.1| - 0.0024 17.7 3.8 0.42 10.5 0.5 3.2 2 2 1 3 3 3 2 Peptidase propeptide and YPEB domain Myco_19_kDa PF05481.7 gi|452210277|ref|YP_007490391.1| - 0.057 13.2 0.3 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 Mycobacterium 19 kDa lipoprotein antigen DUF2874 PF11396.3 gi|452210277|ref|YP_007490391.1| - 1 9.3 3.7 1.1 9.2 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2874) YscO PF07321.7 gi|452210279|ref|YP_007490393.1| - 0.045 13.5 8.9 0.052 13.3 6.1 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO PEARLI-4 PF05278.7 gi|452210279|ref|YP_007490393.1| - 2.4 7.4 10.7 2.5 7.3 7.4 1.0 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF3395 PF11875.3 gi|452210279|ref|YP_007490393.1| - 3.2 7.3 8.2 3.2 7.3 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) PsiA PF06952.6 gi|452210279|ref|YP_007490393.1| - 5.5 5.9 7.4 5.8 5.8 5.2 1.0 1 0 0 1 1 1 0 PsiA protein tRNA-synt_1f PF01921.13 gi|452210280|ref|YP_007490394.1| - 9.2e-139 462.0 0.0 1.2e-138 461.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|452210280|ref|YP_007490394.1| - 6.1e-09 35.0 0.1 0.00034 19.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|452210280|ref|YP_007490394.1| - 1.4e-05 24.3 0.0 0.14 11.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.20 gi|452210280|ref|YP_007490394.1| - 0.12 11.5 0.0 4.2 6.4 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Methyltransf_11 PF08241.7 gi|452210281|ref|YP_007490395.1| - 1.2e-15 57.7 0.0 2e-15 57.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210281|ref|YP_007490395.1| - 8.3e-14 51.6 0.0 1.1e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210281|ref|YP_007490395.1| - 1.3e-10 41.4 0.0 2.8e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210281|ref|YP_007490395.1| - 4.9e-08 33.3 0.0 9e-08 32.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210281|ref|YP_007490395.1| - 5.7e-07 29.2 0.0 8.2e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210281|ref|YP_007490395.1| - 1.7e-06 28.5 0.0 2.4e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210281|ref|YP_007490395.1| - 0.0005 19.2 0.0 0.0013 17.9 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|452210281|ref|YP_007490395.1| - 0.00073 19.5 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|452210281|ref|YP_007490395.1| - 0.1 11.9 0.0 0.15 11.4 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW BofA PF07441.6 gi|452210282|ref|YP_007490396.1| - 1e-07 31.8 18.8 1.3e-07 31.5 13.1 1.1 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA ABC2_membrane PF01061.19 gi|452210282|ref|YP_007490396.1| - 1.8 7.6 12.0 2.2 7.3 8.3 1.2 1 0 0 1 1 1 0 ABC-2 type transporter Nuc_deoxyrib_tr PF05014.10 gi|452210283|ref|YP_007490397.1| - 6.9e-10 38.8 0.0 8.1e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase DUF849 PF05853.7 gi|452210283|ref|YP_007490397.1| - 0.072 11.9 0.0 0.085 11.7 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic protein of unknown function (DUF849) Peptidase_U32 PF01136.14 gi|452210284|ref|YP_007490398.1| - 3.7e-125 415.4 0.0 2.2e-81 272.2 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|452210284|ref|YP_007490398.1| - 2e-34 118.2 0.2 2.3e-33 114.8 0.2 2.3 2 0 0 2 2 2 1 Collagenase Dus PF01207.12 gi|452210284|ref|YP_007490398.1| - 0.027 13.3 0.0 8.3 5.1 0.0 3.5 4 0 0 4 4 4 0 Dihydrouridine synthase (Dus) NAD_binding_10 PF13460.1 gi|452210285|ref|YP_007490399.1| - 2.9e-12 46.9 0.0 1.1e-11 45.0 0.0 1.8 2 0 0 2 2 2 1 NADH(P)-binding NmrA PF05368.8 gi|452210285|ref|YP_007490399.1| - 2.5e-11 43.2 0.0 4.1e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.16 gi|452210285|ref|YP_007490399.1| - 5.1e-05 22.8 0.0 9.8e-05 21.8 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.13 gi|452210285|ref|YP_007490399.1| - 0.0097 15.8 0.1 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain DUF3753 PF12575.3 gi|452210285|ref|YP_007490399.1| - 0.026 14.3 0.0 0.071 12.9 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3753) RmlD_sub_bind PF04321.12 gi|452210285|ref|YP_007490399.1| - 0.11 11.4 0.0 1.4 7.7 0.0 2.0 2 0 0 2 2 2 0 RmlD substrate binding domain MazG PF03819.12 gi|452210288|ref|YP_007490402.1| - 3e-17 62.3 0.0 3.8e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.12 gi|452210288|ref|YP_007490402.1| - 0.00025 21.2 0.5 0.00031 20.9 0.3 1.3 1 1 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase His_biosynth PF00977.16 gi|452210289|ref|YP_007490403.1| - 7.5e-89 296.9 0.3 8.7e-89 296.7 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|452210289|ref|YP_007490403.1| - 1.7e-05 23.9 0.2 0.096 11.7 0.0 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|452210289|ref|YP_007490403.1| - 0.00012 21.3 0.6 0.16 11.1 0.1 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.12 gi|452210289|ref|YP_007490403.1| - 0.00013 20.9 0.0 0.0025 16.7 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|452210289|ref|YP_007490403.1| - 0.00013 21.3 0.2 0.00041 19.6 0.1 1.9 2 1 0 2 2 2 1 PcrB family TMP-TENI PF02581.12 gi|452210289|ref|YP_007490403.1| - 0.00027 20.1 0.1 0.2 10.7 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI DHO_dh PF01180.16 gi|452210289|ref|YP_007490403.1| - 0.00034 19.6 0.1 0.41 9.5 0.0 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase IMPDH PF00478.20 gi|452210289|ref|YP_007490403.1| - 0.0007 18.5 0.5 0.27 10.0 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain SBP_bac_3 PF00497.15 gi|452210289|ref|YP_007490403.1| - 0.065 12.4 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 G3P_antiterm PF04309.7 gi|452210289|ref|YP_007490403.1| - 0.098 11.6 0.2 0.63 9.0 0.1 2.0 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DNase-RNase PF02577.9 gi|452210290|ref|YP_007490404.1| - 2.9e-40 136.6 0.1 3.5e-40 136.3 0.1 1.1 1 0 0 1 1 1 1 Bifunctional nuclease PCMT PF01135.14 gi|452210291|ref|YP_007490405.1| - 2.8e-67 226.3 0.1 3.1e-67 226.1 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.1 gi|452210291|ref|YP_007490405.1| - 6.1e-10 38.8 0.0 8.8e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210291|ref|YP_007490405.1| - 5.9e-08 33.2 0.0 8.6e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.5 gi|452210291|ref|YP_007490405.1| - 8.7e-08 31.9 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_3 PF01596.12 gi|452210291|ref|YP_007490405.1| - 5.7e-06 25.5 0.0 5.6e-05 22.2 0.0 1.9 2 0 0 2 2 2 1 O-methyltransferase Ubie_methyltran PF01209.13 gi|452210291|ref|YP_007490405.1| - 6.5e-06 25.4 0.0 8.1e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Fibrillarin PF01269.12 gi|452210291|ref|YP_007490405.1| - 6.7e-06 25.1 0.0 1.1e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin Methyltransf_26 PF13659.1 gi|452210291|ref|YP_007490405.1| - 4.4e-05 23.4 0.0 0.00014 21.8 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210291|ref|YP_007490405.1| - 0.00017 21.0 0.0 0.00026 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.1 gi|452210291|ref|YP_007490405.1| - 0.0002 21.1 0.0 0.0007 19.3 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452210291|ref|YP_007490405.1| - 0.00027 20.0 0.0 0.00034 19.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|452210291|ref|YP_007490405.1| - 0.0024 18.6 0.0 0.025 15.4 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210291|ref|YP_007490405.1| - 0.012 16.0 0.1 0.057 13.9 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.15 gi|452210291|ref|YP_007490405.1| - 0.024 13.7 0.0 0.033 13.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_28 PF02636.12 gi|452210291|ref|YP_007490405.1| - 0.068 12.5 0.0 0.086 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase ACP_syn_III_C PF08541.5 gi|452210291|ref|YP_007490405.1| - 0.084 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Methyltransf_4 PF02390.12 gi|452210291|ref|YP_007490405.1| - 0.13 11.2 0.0 0.21 10.6 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase DUF2387 PF09526.5 gi|452210292|ref|YP_007490406.1| - 0.0018 18.1 1.0 0.0044 16.9 0.7 1.7 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) DUF4625 PF15418.1 gi|452210292|ref|YP_007490406.1| - 0.028 14.5 0.1 0.047 13.8 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4625) zinc_ribbon_5 PF13719.1 gi|452210292|ref|YP_007490406.1| - 0.04 13.5 0.5 0.089 12.3 0.3 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|452210292|ref|YP_007490406.1| - 0.061 13.0 0.6 0.14 11.8 0.4 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.8 gi|452210292|ref|YP_007490406.1| - 0.096 12.2 1.8 0.28 10.6 1.3 1.9 1 1 0 1 1 1 0 InsA N-terminal domain Cupredoxin_1 PF13473.1 gi|452210292|ref|YP_007490406.1| - 0.19 11.6 1.8 5.5 6.9 0.2 2.4 1 1 1 2 2 2 0 Cupredoxin-like domain CTP-dep_RFKase PF01982.11 gi|452210294|ref|YP_007490408.1| - 1.2e-46 157.2 0.0 1.8e-46 156.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HxlR PF01638.12 gi|452210294|ref|YP_007490408.1| - 0.08 12.5 0.3 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 HxlR-like helix-turn-helix DHBP_synthase PF00926.14 gi|452210295|ref|YP_007490409.1| - 2.7e-67 225.7 0.0 3.1e-67 225.5 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase Med21 PF11221.3 gi|452210296|ref|YP_007490410.1| - 0.21 11.5 2.1 0.21 11.5 1.4 1.0 1 0 0 1 1 1 0 Subunit 21 of Mediator complex Pox_A_type_inc PF04508.7 gi|452210296|ref|YP_007490410.1| - 0.25 11.2 3.7 0.24 11.2 1.6 1.8 1 1 0 1 1 1 0 Viral A-type inclusion protein repeat Cation_efflux PF01545.16 gi|452210297|ref|YP_007490411.1| - 6.4e-59 199.3 8.7 7.5e-59 199.1 6.1 1.0 1 0 0 1 1 1 1 Cation efflux family Intg_mem_TP0381 PF09529.5 gi|452210297|ref|YP_007490411.1| - 0.6 9.3 6.3 0.22 10.7 0.1 2.4 2 1 0 2 2 2 0 Integral membrane protein (intg_mem_TP0381) Chorismate_synt PF01264.16 gi|452210298|ref|YP_007490412.1| - 3.9e-154 512.2 0.1 4.4e-154 512.1 0.1 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3160 PF11369.3 gi|452210299|ref|YP_007490413.1| - 1.7e-285 948.3 6.4 1.9e-285 948.1 4.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) DUF1724 PF08350.5 gi|452210302|ref|YP_007490416.1| - 2.1e-22 78.3 1.7 5.4e-22 77.0 0.3 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HxlR PF01638.12 gi|452210302|ref|YP_007490416.1| - 0.0013 18.2 0.1 0.0035 16.9 0.1 1.7 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|452210302|ref|YP_007490416.1| - 0.034 14.4 0.1 0.071 13.4 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HemN_C PF06969.11 gi|452210302|ref|YP_007490416.1| - 0.092 12.8 0.1 0.31 11.1 0.0 2.0 2 0 0 2 2 2 0 HemN C-terminal domain DUF4367 PF14285.1 gi|452210304|ref|YP_007490418.1| - 5.2e-10 38.8 10.2 5.2e-10 38.8 7.0 2.7 2 1 1 3 3 3 1 Domain of unknown function (DUF4367) DUF1329 PF07044.6 gi|452210304|ref|YP_007490418.1| - 0.0025 16.8 0.0 0.0043 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1329) DUF4412 PF14371.1 gi|452210304|ref|YP_007490418.1| - 0.014 15.8 0.0 0.043 14.3 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4412) MucB_RseB PF03888.9 gi|452210304|ref|YP_007490418.1| - 0.057 12.4 0.0 0.27 10.2 0.0 2.1 2 0 0 2 2 2 0 MucB/RseB family Brevenin PF03032.10 gi|452210304|ref|YP_007490418.1| - 0.21 11.4 0.2 0.21 11.4 0.1 1.7 2 0 0 2 2 2 0 Brevenin/esculentin/gaegurin/rugosin family hSH3 PF14603.1 gi|452210305|ref|YP_007490419.1| - 0.072 13.1 0.1 0.14 12.1 0.1 1.5 1 0 0 1 1 1 0 Helically-extended SH3 domain CcoS PF03597.10 gi|452210306|ref|YP_007490420.1| - 0.022 14.2 2.3 0.034 13.6 1.6 1.3 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type DUF1724 PF08350.5 gi|452210310|ref|YP_007490424.1| - 5.9e-22 76.9 1.4 6.5e-22 76.8 0.3 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) Peptidase_C3 PF00548.15 gi|452210311|ref|YP_007490425.1| - 0.41 10.4 2.8 0.85 9.4 2.0 1.5 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Radical_SAM PF04055.16 gi|452210314|ref|YP_007490428.1| - 1e-23 84.3 0.0 1.6e-23 83.6 0.0 1.3 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452210314|ref|YP_007490428.1| - 7.9e-10 38.9 0.0 1.5e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452210314|ref|YP_007490428.1| - 1.6e-08 34.6 0.0 3.4e-08 33.5 0.0 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain AP_endonuc_2 PF01261.19 gi|452210314|ref|YP_007490428.1| - 0.0067 15.7 0.1 0.023 14.0 0.0 1.8 2 1 0 2 2 2 1 Xylose isomerase-like TIM barrel Hydrolase_6 PF13344.1 gi|452210314|ref|YP_007490428.1| - 0.027 14.3 0.0 1.7 8.5 0.0 2.9 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Y1_Tnp PF01797.11 gi|452210315|ref|YP_007490429.1| - 1.4e-40 137.8 0.7 1.6e-40 137.7 0.5 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.4 gi|452210315|ref|YP_007490429.1| - 0.012 14.8 0.1 0.24 10.6 0.0 2.0 2 0 0 2 2 2 0 Conserved mid region of cactin DDE_Tnp_IS66 PF03050.9 gi|452210316|ref|YP_007490430.1| - 1.7e-14 53.7 0.1 1.7e-14 53.6 0.1 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-RING_5 PF14634.1 gi|452210316|ref|YP_007490430.1| - 0.1 12.3 1.7 0.11 12.2 0.6 1.7 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4 PF00097.20 gi|452210316|ref|YP_007490430.1| - 0.18 11.5 3.8 0.83 9.3 0.2 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) SPASM PF13186.1 gi|452210318|ref|YP_007490432.1| - 5.5e-09 36.2 1.6 9.1e-09 35.5 1.1 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Arif-1 PF06770.6 gi|452210318|ref|YP_007490432.1| - 0.0006 19.2 0.1 0.00071 19.0 0.1 1.1 1 0 0 1 1 1 1 Actin-rearrangement-inducing factor (Arif-1) HTH_AsnC-type PF13404.1 gi|452210319|ref|YP_007490433.1| - 3.4e-09 36.1 0.0 6.9e-09 35.0 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|452210319|ref|YP_007490433.1| - 0.00041 19.6 1.6 0.0033 16.7 1.1 2.1 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|452210319|ref|YP_007490433.1| - 0.033 13.8 0.2 0.097 12.3 0.0 1.8 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|452210319|ref|YP_007490433.1| - 0.037 13.8 0.0 0.061 13.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|452210319|ref|YP_007490433.1| - 0.093 12.3 0.1 0.2 11.2 0.1 1.5 1 1 0 1 1 1 0 LexA DNA binding domain HTH_27 PF13463.1 gi|452210319|ref|YP_007490433.1| - 0.11 12.8 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_AsnC-type PF13404.1 gi|452210320|ref|YP_007490434.1| - 2.5e-05 23.6 0.0 5.7e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|452210320|ref|YP_007490434.1| - 0.0022 17.3 0.3 0.28 10.6 0.0 2.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 gi|452210320|ref|YP_007490434.1| - 0.011 15.4 0.1 0.14 11.9 0.0 2.1 2 0 0 2 2 2 0 AsnC family DegV PF02645.11 gi|452210320|ref|YP_007490434.1| - 0.016 14.2 0.0 0.024 13.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.4 gi|452210320|ref|YP_007490434.1| - 0.053 12.9 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain Aldo_ket_red PF00248.16 gi|452210320|ref|YP_007490434.1| - 0.067 12.0 0.0 0.075 11.8 0.0 1.3 1 1 0 1 1 1 0 Aldo/keto reductase family FaeA PF04703.7 gi|452210320|ref|YP_007490434.1| - 0.069 13.3 0.0 0.48 10.6 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein IF2_N PF04760.10 gi|452210320|ref|YP_007490434.1| - 0.11 12.1 0.3 0.4 10.3 0.0 2.2 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region HEPN PF05168.9 gi|452210320|ref|YP_007490434.1| - 0.14 12.0 0.0 0.49 10.2 0.0 1.8 2 0 0 2 2 2 0 HEPN domain NAD_binding_7 PF13241.1 gi|452210321|ref|YP_007490435.1| - 5.7e-19 68.2 0.0 1e-18 67.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Saccharop_dh PF03435.13 gi|452210321|ref|YP_007490435.1| - 0.0013 17.7 0.0 0.034 13.1 0.0 2.0 1 1 1 2 2 2 2 Saccharopine dehydrogenase TrkA_N PF02254.13 gi|452210321|ref|YP_007490435.1| - 0.016 15.1 0.1 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain GlutR_N PF05201.10 gi|452210322|ref|YP_007490436.1| - 3.1e-40 137.2 0.0 6.2e-40 136.2 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 gi|452210322|ref|YP_007490436.1| - 1e-38 132.4 0.2 2.1e-38 131.4 0.2 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.15 gi|452210322|ref|YP_007490436.1| - 2.5e-23 81.9 0.5 5.7e-23 80.7 0.3 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.12 gi|452210322|ref|YP_007490436.1| - 2.6e-06 27.7 0.2 8e-06 26.1 0.1 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh PF03435.13 gi|452210322|ref|YP_007490436.1| - 2.7e-06 26.6 0.3 4.3e-06 25.9 0.2 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase 2-Hacid_dh_C PF02826.14 gi|452210322|ref|YP_007490436.1| - 1.1e-05 24.7 0.1 1.9e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|452210322|ref|YP_007490436.1| - 4.5e-05 23.5 0.5 9.3e-05 22.5 0.1 1.7 2 0 0 2 2 2 1 NADH(P)-binding NAD_binding_7 PF13241.1 gi|452210322|ref|YP_007490436.1| - 8.7e-05 22.7 0.1 0.00036 20.7 0.0 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding CPSase_L_chain PF00289.17 gi|452210322|ref|YP_007490436.1| - 0.0017 18.4 0.1 0.0038 17.3 0.1 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain THF_DHG_CYH_C PF02882.14 gi|452210322|ref|YP_007490436.1| - 0.0063 15.6 0.1 2.9 6.9 0.0 2.7 3 0 0 3 3 3 2 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_2 PF03446.10 gi|452210322|ref|YP_007490436.1| - 0.01 15.6 0.0 0.024 14.4 0.0 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase TrkA_N PF02254.13 gi|452210322|ref|YP_007490436.1| - 0.015 15.2 1.1 0.051 13.5 0.4 2.3 1 1 0 1 1 1 0 TrkA-N domain ThiF PF00899.16 gi|452210322|ref|YP_007490436.1| - 0.023 14.5 2.4 0.034 13.9 0.2 2.4 2 2 1 3 3 3 0 ThiF family adh_short PF00106.20 gi|452210322|ref|YP_007490436.1| - 0.058 13.3 0.2 0.13 12.1 0.1 1.6 1 0 0 1 1 1 0 short chain dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|452210322|ref|YP_007490436.1| - 0.093 12.4 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALAD PF00490.16 gi|452210323|ref|YP_007490437.1| - 1e-137 458.4 0.0 1.4e-137 457.9 0.0 1.2 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Aminotran_3 PF00202.16 gi|452210324|ref|YP_007490438.1| - 6.2e-64 215.9 0.0 8.6e-64 215.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.15 gi|452210325|ref|YP_007490439.1| - 1.8e-64 216.5 0.0 2.4e-64 216.1 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|452210325|ref|YP_007490439.1| - 6.8e-13 48.5 0.1 1.7e-12 47.2 0.0 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DHO_dh PF01180.16 gi|452210326|ref|YP_007490440.1| - 3.4e-66 223.2 0.1 3.8e-66 223.0 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|452210326|ref|YP_007490440.1| - 8.1e-11 41.3 0.1 8.7e-06 24.7 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|452210326|ref|YP_007490440.1| - 5e-05 22.6 5.9 0.00011 21.4 4.1 1.7 1 1 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.16 gi|452210326|ref|YP_007490440.1| - 0.00013 21.3 0.8 0.00026 20.3 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|452210326|ref|YP_007490440.1| - 0.0017 17.6 1.2 0.0065 15.7 0.1 2.0 2 0 0 2 2 2 1 PcrB family DUF561 PF04481.7 gi|452210326|ref|YP_007490440.1| - 0.036 13.0 0.4 0.069 12.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) NanE PF04131.9 gi|452210326|ref|YP_007490440.1| - 0.079 11.9 0.7 0.18 10.7 0.1 1.8 1 1 1 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.20 gi|452210326|ref|YP_007490440.1| - 0.098 11.5 2.4 0.14 10.9 1.7 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain IGPS PF00218.16 gi|452210326|ref|YP_007490440.1| - 0.14 11.1 0.0 0.2 10.6 0.0 1.2 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase NAD_binding_1 PF00175.16 gi|452210327|ref|YP_007490441.1| - 7.8e-15 55.3 0.0 1.2e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|452210327|ref|YP_007490441.1| - 1.6e-12 46.7 4.6 3e-12 45.8 3.2 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|452210327|ref|YP_007490441.1| - 0.00011 22.2 0.0 0.00045 20.2 0.0 2.0 2 1 0 2 2 2 1 Oxidoreductase FAD-binding domain FAA_hydrolase PF01557.13 gi|452210328|ref|YP_007490442.1| - 1.1e-70 237.5 0.0 1.6e-70 237.0 0.0 1.2 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family TrmB PF01978.14 gi|452210329|ref|YP_007490443.1| - 0.0029 17.2 0.2 0.0055 16.3 0.1 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB RepL PF05732.6 gi|452210329|ref|YP_007490443.1| - 0.008 15.4 0.1 0.019 14.1 0.1 1.8 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.1 gi|452210329|ref|YP_007490443.1| - 0.018 14.4 0.2 0.027 13.8 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|452210329|ref|YP_007490443.1| - 0.018 14.7 0.1 0.037 13.7 0.1 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452210329|ref|YP_007490443.1| - 0.027 14.2 0.1 0.037 13.8 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|452210329|ref|YP_007490443.1| - 0.039 14.0 0.1 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_12 PF08461.5 gi|452210329|ref|YP_007490443.1| - 0.059 13.0 0.6 0.31 10.8 0.0 2.4 2 1 1 3 3 3 0 Ribonuclease R winged-helix domain DUF4423 PF14394.1 gi|452210329|ref|YP_007490443.1| - 0.076 12.5 0.3 0.35 10.3 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) HSBP1 PF06825.7 gi|452210329|ref|YP_007490443.1| - 0.077 12.5 0.1 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Heat shock factor binding protein 1 DUF2513 PF10711.4 gi|452210329|ref|YP_007490443.1| - 0.08 13.0 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) RNA_pol_Rpc34 PF05158.7 gi|452210329|ref|YP_007490443.1| - 0.084 12.0 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit MarR PF01047.17 gi|452210329|ref|YP_007490443.1| - 0.093 12.4 0.1 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 MarR family Phage_rep_org_N PF09681.5 gi|452210329|ref|YP_007490443.1| - 0.12 11.9 0.1 0.14 11.7 0.1 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) FaeA PF04703.7 gi|452210329|ref|YP_007490443.1| - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein tRNA-synt_1c PF00749.16 gi|452210330|ref|YP_007490444.1| - 7e-65 218.7 0.0 8.5e-65 218.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|452210330|ref|YP_007490444.1| - 9.8e-29 100.2 0.0 2e-28 99.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain DUF1087 PF06465.8 gi|452210330|ref|YP_007490444.1| - 0.039 13.8 0.1 0.078 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) NosD PF05048.8 gi|452210331|ref|YP_007490445.1| - 9.1e-46 155.9 21.4 2.2e-45 154.6 14.8 1.6 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452210331|ref|YP_007490445.1| - 3.7e-14 52.7 18.7 7.9e-14 51.7 12.9 1.6 1 0 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.6 gi|452210331|ref|YP_007490445.1| - 4.1e-06 26.1 9.7 0.083 12.0 0.0 2.9 2 1 0 2 2 2 2 Protein of unknown function (DUF1565) Pectate_lyase_3 PF12708.2 gi|452210331|ref|YP_007490445.1| - 0.00011 22.4 8.4 0.00036 20.7 5.8 1.8 1 1 0 1 1 1 1 Pectate lyase superfamily protein TraW_N PF12477.3 gi|452210331|ref|YP_007490445.1| - 8.6 6.4 6.3 1.4 8.9 1.0 2.1 2 0 0 2 2 2 0 Sex factor F TraW protein N terminal tRNA_anti-codon PF01336.20 gi|452210332|ref|YP_007490446.1| - 6.1e-10 38.8 0.1 0.039 13.8 0.0 3.8 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain 2-Hacid_dh_C PF02826.14 gi|452210334|ref|YP_007490448.1| - 2.2e-61 206.1 0.0 3.5e-61 205.4 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|452210334|ref|YP_007490448.1| - 8.4e-41 138.5 2.4 1.3e-40 137.9 0.4 2.1 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.20 gi|452210334|ref|YP_007490448.1| - 8e-06 25.2 0.0 2.7e-05 23.5 0.0 2.0 1 0 0 1 1 1 1 ACT domain IlvN PF07991.7 gi|452210334|ref|YP_007490448.1| - 2.7e-05 23.5 0.2 0.0001 21.6 0.0 2.0 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.10 gi|452210334|ref|YP_007490448.1| - 0.0002 21.2 2.5 0.00029 20.7 0.1 2.4 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|452210334|ref|YP_007490448.1| - 0.023 15.1 0.3 0.74 10.2 0.0 3.1 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent DUF2240 PF09999.4 gi|452210335|ref|YP_007490449.1| - 3e-08 33.2 0.1 3.3e-08 33.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Ribosomal_S9 PF00380.14 gi|452210336|ref|YP_007490450.1| - 1.2e-32 112.6 0.2 1.4e-32 112.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SLH PF00395.15 gi|452210336|ref|YP_007490450.1| - 0.055 13.2 0.1 0.15 11.8 0.0 1.8 2 0 0 2 2 2 0 S-layer homology domain RNA_pol_Rpb6 PF01192.17 gi|452210337|ref|YP_007490451.1| - 2e-08 33.8 0.1 2.2e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF2590 PF10761.4 gi|452210337|ref|YP_007490451.1| - 0.066 12.9 0.0 0.074 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2590) Ribosomal_S2 PF00318.15 gi|452210338|ref|YP_007490452.1| - 3.3e-38 131.0 0.0 2.1e-19 69.6 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Avirulence PF03377.8 gi|452210338|ref|YP_007490452.1| - 0.027 13.2 0.0 0.033 12.9 0.0 1.2 1 0 0 1 1 1 0 Xanthomonas avirulence protein, Avr/PthA Memo PF01875.12 gi|452210339|ref|YP_007490453.1| - 1.1e-24 86.7 0.0 1.5e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein GHMP_kinases_N PF00288.21 gi|452210340|ref|YP_007490454.1| - 1e-18 67.1 0.8 1e-18 67.1 0.5 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|452210340|ref|YP_007490454.1| - 3e-13 49.7 0.3 3e-13 49.7 0.2 2.3 3 0 0 3 3 3 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.4 gi|452210340|ref|YP_007490454.1| - 0.015 14.5 0.0 0.031 13.5 0.0 1.5 1 0 0 1 1 1 0 Galactokinase galactose-binding signature FMN_dh PF01070.13 gi|452210341|ref|YP_007490455.1| - 5.5e-37 127.4 0.0 2.5e-24 85.8 0.0 2.3 1 1 1 2 2 2 2 FMN-dependent dehydrogenase NMO PF03060.10 gi|452210341|ref|YP_007490455.1| - 0.00013 21.2 0.1 0.00033 19.8 0.1 1.6 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.20 gi|452210341|ref|YP_007490455.1| - 0.00042 19.3 4.4 0.0054 15.6 0.2 3.1 4 0 0 4 4 4 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.16 gi|452210341|ref|YP_007490455.1| - 0.00059 18.8 1.5 0.021 13.7 0.0 2.5 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Glu_synthase PF01645.12 gi|452210341|ref|YP_007490455.1| - 0.0048 15.8 0.2 0.0079 15.1 0.2 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase Amidohydro_2 PF04909.9 gi|452210341|ref|YP_007490455.1| - 0.011 15.3 0.1 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase His_biosynth PF00977.16 gi|452210341|ref|YP_007490455.1| - 0.011 14.9 0.6 0.43 9.7 0.1 2.6 3 0 0 3 3 3 0 Histidine biosynthesis protein Lactamase_B PF00753.22 gi|452210343|ref|YP_007490457.1| - 3e-17 62.9 1.5 4.2e-17 62.4 0.0 2.0 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|452210343|ref|YP_007490457.1| - 2.6e-09 36.7 0.5 5.9e-09 35.6 0.3 1.6 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|452210343|ref|YP_007490457.1| - 7.6e-08 32.1 0.1 5.3e-07 29.3 0.0 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain polyprenyl_synt PF00348.12 gi|452210344|ref|YP_007490458.1| - 4.4e-67 225.6 0.0 5.2e-67 225.4 0.0 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase Transposase_22 PF02994.9 gi|452210345|ref|YP_007490459.1| - 0.032 12.7 1.8 0.046 12.2 1.2 1.1 1 0 0 1 1 1 0 L1 transposable element ABC2_membrane_3 PF12698.2 gi|452210345|ref|YP_007490459.1| - 0.39 9.6 7.4 0.47 9.4 5.1 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein FtsH_ext PF06480.10 gi|452210345|ref|YP_007490459.1| - 2.1 8.5 8.6 0.38 10.9 0.8 2.9 3 1 0 3 3 3 0 FtsH Extracellular PEP-utilizers_C PF02896.13 gi|452210346|ref|YP_007490460.1| - 4.1e-102 341.0 0.1 7.6e-102 340.1 0.1 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.14 gi|452210346|ref|YP_007490460.1| - 3.1e-65 220.4 0.0 1.5e-64 218.1 0.0 1.9 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.18 gi|452210346|ref|YP_007490460.1| - 6.8e-23 80.0 0.5 1.7e-22 78.7 0.4 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.8 gi|452210346|ref|YP_007490460.1| - 0.053 13.3 0.6 0.74 9.6 0.0 2.8 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal TFIIB PF00382.14 gi|452210347|ref|YP_007490461.1| - 2.6e-47 158.4 2.6 3.7e-24 84.3 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|452210347|ref|YP_007490461.1| - 5.9e-19 67.1 1.4 1.3e-18 66.0 0.6 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|452210347|ref|YP_007490461.1| - 0.00017 21.1 0.4 0.0004 19.9 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.11 gi|452210347|ref|YP_007490461.1| - 0.0031 16.7 0.5 0.017 14.4 0.1 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_N PF00134.18 gi|452210347|ref|YP_007490461.1| - 0.015 14.8 0.0 2.6 7.6 0.0 2.4 1 1 1 2 2 2 0 Cyclin, N-terminal domain zf-ribbon_3 PF13248.1 gi|452210347|ref|YP_007490461.1| - 0.017 14.3 0.4 0.017 14.3 0.3 1.9 2 0 0 2 2 1 0 zinc-ribbon domain HTH_AsnC-type PF13404.1 gi|452210347|ref|YP_007490461.1| - 0.02 14.4 0.2 0.084 12.4 0.1 2.1 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Lar_restr_allev PF14354.1 gi|452210347|ref|YP_007490461.1| - 0.025 14.8 0.9 0.25 11.6 0.3 2.5 2 0 0 2 2 2 0 Restriction alleviation protein Lar A2L_zn_ribbon PF08792.5 gi|452210347|ref|YP_007490461.1| - 0.028 13.8 1.9 0.11 11.9 1.3 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain RPA_interact_C PF14768.1 gi|452210347|ref|YP_007490461.1| - 0.039 14.3 0.1 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 Replication protein A interacting C-terminal Cyclin_C PF02984.14 gi|452210347|ref|YP_007490461.1| - 0.039 13.8 0.0 7.2 6.5 0.0 2.5 2 0 0 2 2 2 0 Cyclin, C-terminal domain DZR PF12773.2 gi|452210347|ref|YP_007490461.1| - 0.05 13.4 1.5 0.18 11.6 0.3 2.2 2 0 0 2 2 2 0 Double zinc ribbon FYDLN_acid PF09538.5 gi|452210347|ref|YP_007490461.1| - 0.055 14.0 0.2 0.19 12.3 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) HTH_24 PF13412.1 gi|452210347|ref|YP_007490461.1| - 0.056 12.8 0.1 0.36 10.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Elf1 PF05129.8 gi|452210347|ref|YP_007490461.1| - 0.14 11.8 1.8 0.28 10.9 0.3 2.1 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like HTH_31 PF13560.1 gi|452210347|ref|YP_007490461.1| - 0.36 11.0 3.7 3.3 7.9 0.0 3.3 3 1 1 4 4 3 0 Helix-turn-helix domain Ribosomal_S27e PF01667.12 gi|452210347|ref|YP_007490461.1| - 0.45 10.0 1.8 0.48 10.0 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.2 gi|452210347|ref|YP_007490461.1| - 1.3 8.9 4.5 0.24 11.2 0.3 2.0 2 0 0 2 2 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|452210347|ref|YP_007490461.1| - 7.5 6.5 7.2 0.95 9.4 0.3 2.8 2 1 1 3 3 3 0 Zinc ribbon domain LysE PF01810.13 gi|452210348|ref|YP_007490462.1| - 3.6e-29 101.4 14.9 4.2e-29 101.1 10.3 1.0 1 0 0 1 1 1 1 LysE type translocator DUF3687 PF12459.3 gi|452210348|ref|YP_007490462.1| - 0.053 12.7 3.0 0.13 11.5 2.0 1.7 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein Met_10 PF02475.11 gi|452210350|ref|YP_007490464.1| - 1.6e-65 220.4 0.0 2e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|452210350|ref|YP_007490464.1| - 4.7e-13 49.7 0.0 4.5e-12 46.5 0.0 2.1 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210350|ref|YP_007490464.1| - 4.1e-11 42.7 0.0 1.4e-10 40.9 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|452210350|ref|YP_007490464.1| - 1e-09 37.9 0.0 3.8e-09 36.1 0.0 1.6 1 1 0 2 2 2 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|452210350|ref|YP_007490464.1| - 6.5e-08 32.6 0.0 1.4e-07 31.5 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|452210350|ref|YP_007490464.1| - 3.9e-07 29.6 0.0 5.9e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.8 gi|452210350|ref|YP_007490464.1| - 4.3e-07 29.3 0.0 7.3e-07 28.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|452210350|ref|YP_007490464.1| - 1.3e-05 24.7 0.0 2.2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.11 gi|452210350|ref|YP_007490464.1| - 3.3e-05 22.9 0.0 4.4e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.1 gi|452210350|ref|YP_007490464.1| - 0.00014 22.1 0.0 0.00026 21.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452210350|ref|YP_007490464.1| - 0.00045 19.3 0.0 0.00069 18.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|452210350|ref|YP_007490464.1| - 0.00045 21.0 0.0 0.001 19.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|452210350|ref|YP_007490464.1| - 0.00058 19.0 0.0 0.00088 18.4 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.12 gi|452210350|ref|YP_007490464.1| - 0.00074 18.6 0.0 0.0023 16.9 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase ADH_zinc_N PF00107.21 gi|452210350|ref|YP_007490464.1| - 0.00088 18.8 0.0 0.0017 17.9 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_23 PF13489.1 gi|452210350|ref|YP_007490464.1| - 0.0017 18.0 0.0 0.003 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210350|ref|YP_007490464.1| - 0.009 16.4 0.0 0.02 15.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210350|ref|YP_007490464.1| - 0.012 16.0 0.0 0.026 15.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PRMT5 PF05185.11 gi|452210350|ref|YP_007490464.1| - 0.015 14.2 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase PCMT PF01135.14 gi|452210350|ref|YP_007490464.1| - 0.015 14.8 0.1 0.031 13.8 0.0 1.5 2 0 0 2 2 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.13 gi|452210350|ref|YP_007490464.1| - 0.02 14.4 0.0 0.034 13.6 0.0 1.3 1 0 0 1 1 1 0 DNA methylase DUF43 PF01861.11 gi|452210350|ref|YP_007490464.1| - 0.033 13.1 0.0 0.09 11.7 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF43 Nol1_Nop2_Fmu PF01189.12 gi|452210350|ref|YP_007490464.1| - 0.037 13.3 0.0 0.069 12.5 0.0 1.4 1 1 0 1 1 1 0 NOL1/NOP2/sun family DNA_methylase PF00145.12 gi|452210350|ref|YP_007490464.1| - 0.11 11.6 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Ubie_methyltran PF01209.13 gi|452210350|ref|YP_007490464.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family AhpC-TSA PF00578.16 gi|452210352|ref|YP_007490466.1| - 1.1e-29 102.6 0.0 1.4e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|452210352|ref|YP_007490466.1| - 2.1e-16 59.7 0.0 2.5e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.9 gi|452210352|ref|YP_007490466.1| - 0.0036 16.9 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC DUF3107 PF11305.3 gi|452210352|ref|YP_007490466.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3107) Cation_efflux PF01545.16 gi|452210353|ref|YP_007490467.1| - 2.6e-61 207.2 5.0 2.9e-61 207.0 3.5 1.0 1 0 0 1 1 1 1 Cation efflux family Abhydrolase_5 PF12695.2 gi|452210354|ref|YP_007490468.1| - 5.6e-16 58.5 0.0 7.3e-16 58.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|452210354|ref|YP_007490468.1| - 4.2e-10 39.8 0.3 6.2e-05 22.9 0.1 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase family DLH PF01738.13 gi|452210354|ref|YP_007490468.1| - 1.7e-06 27.5 0.0 2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.6 gi|452210354|ref|YP_007490468.1| - 0.00022 21.0 0.0 0.00092 18.9 0.0 1.9 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.13 gi|452210354|ref|YP_007490468.1| - 0.02 14.3 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Peptidase_S9 PF00326.16 gi|452210354|ref|YP_007490468.1| - 0.025 13.8 0.1 6.5 5.9 0.0 2.4 1 1 1 2 2 2 0 Prolyl oligopeptidase family Hydrolase_4 PF12146.3 gi|452210354|ref|YP_007490468.1| - 0.039 13.8 0.0 0.076 12.8 0.0 1.5 1 0 0 1 1 1 0 Putative lysophospholipase Abhydrolase_2 PF02230.11 gi|452210354|ref|YP_007490468.1| - 0.077 12.4 0.0 2.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.15 gi|452210354|ref|YP_007490468.1| - 0.11 11.9 0.1 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 alpha/beta hydrolase fold Pribosyltran PF00156.22 gi|452210355|ref|YP_007490469.1| - 2e-30 105.1 0.5 2.8e-30 104.6 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|452210355|ref|YP_007490469.1| - 0.00018 20.8 0.0 0.00043 19.6 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|452210355|ref|YP_007490469.1| - 0.0015 17.7 0.1 0.0021 17.3 0.1 1.5 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_3 PF15610.1 gi|452210355|ref|YP_007490469.1| - 0.025 13.5 0.0 2.7 6.8 0.0 2.2 1 1 1 2 2 2 0 PRTase ComF-like HisKA_2 PF07568.7 gi|452210356|ref|YP_007490470.1| - 5.5e-33 112.6 0.2 1e-32 111.7 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|452210356|ref|YP_007490470.1| - 1.4e-12 47.4 0.0 2.8e-12 46.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|452210356|ref|YP_007490470.1| - 4.6e-11 42.4 0.0 8.9e-11 41.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|452210356|ref|YP_007490470.1| - 7.5e-06 26.2 0.1 6.5e-05 23.2 0.0 2.4 2 1 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|452210356|ref|YP_007490470.1| - 0.00032 20.4 0.0 0.00063 19.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|452210356|ref|YP_007490470.1| - 0.00067 20.0 0.1 0.0013 19.1 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase DUF4481 PF14800.1 gi|452210356|ref|YP_007490470.1| - 1.3 7.8 3.4 2.8 6.7 2.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Glt_symporter PF03616.9 gi|452210357|ref|YP_007490471.1| - 2.2e-09 36.2 16.1 4.7e-07 28.6 6.3 2.4 2 1 0 2 2 2 2 Sodium/glutamate symporter AIM24 PF01987.12 gi|452210358|ref|YP_007490472.1| - 8.3e-47 159.4 0.6 1.1e-46 159.0 0.4 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 SH3_8 PF13457.1 gi|452210359|ref|YP_007490473.1| - 0.056 13.6 1.5 6.1 7.0 0.0 3.3 4 0 0 4 4 4 0 SH3-like domain DUF1724 PF08350.5 gi|452210360|ref|YP_007490474.1| - 2.5e-22 78.1 0.0 5.4e-22 77.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452210360|ref|YP_007490474.1| - 0.0064 16.1 0.1 0.011 15.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|452210360|ref|YP_007490474.1| - 0.012 15.2 0.1 0.028 14.0 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.2 gi|452210360|ref|YP_007490474.1| - 0.062 13.1 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.14 gi|452210360|ref|YP_007490474.1| - 0.084 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|452210360|ref|YP_007490474.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix zf-RING_4 PF14570.1 gi|452210361|ref|YP_007490475.1| - 0.011 15.2 1.1 0.011 15.2 0.8 3.0 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain RecR PF02132.10 gi|452210361|ref|YP_007490475.1| - 0.05 13.0 0.5 8.7 5.8 0.3 2.4 2 0 0 2 2 2 0 RecR protein Viral_NABP PF05515.6 gi|452210361|ref|YP_007490475.1| - 0.063 13.5 1.3 1.1 9.4 0.4 2.2 2 0 0 2 2 2 0 Viral nucleic acid binding zf-UDP PF14569.1 gi|452210361|ref|YP_007490475.1| - 0.38 10.5 7.4 0.045 13.5 1.9 1.9 2 0 0 2 2 2 0 Zinc-binding RING-finger DZR PF12773.2 gi|452210361|ref|YP_007490475.1| - 4.7 7.1 12.3 0.28 11.0 4.0 2.0 2 0 0 2 2 2 0 Double zinc ribbon DnaJ_CXXCXGXG PF00684.14 gi|452210362|ref|YP_007490476.1| - 4.4e-06 26.6 17.1 5.8e-05 23.0 12.2 2.3 1 1 1 2 2 2 2 DnaJ central domain DZR PF12773.2 gi|452210362|ref|YP_007490476.1| - 0.0058 16.4 9.3 0.011 15.5 6.5 1.4 1 1 0 1 1 1 1 Double zinc ribbon zf-RING_5 PF14634.1 gi|452210362|ref|YP_007490476.1| - 0.16 11.7 0.4 0.16 11.7 0.3 2.5 3 0 0 3 3 3 0 zinc-RING finger domain Stc1 PF12898.2 gi|452210362|ref|YP_007490476.1| - 1.6 8.8 7.1 4.3 7.4 2.9 2.0 1 1 1 2 2 2 0 Stc1 domain OrfB_Zn_ribbon PF07282.6 gi|452210362|ref|YP_007490476.1| - 2.6 7.7 10.3 0.44 10.2 0.8 2.4 1 1 1 2 2 2 0 Putative transposase DNA-binding domain A2L_zn_ribbon PF08792.5 gi|452210362|ref|YP_007490476.1| - 3.6 7.1 10.5 3.9 7.0 0.5 3.3 3 1 0 3 3 3 0 A2L zinc ribbon domain Zn-ribbon_8 PF09723.5 gi|452210362|ref|YP_007490476.1| - 3.8 7.5 11.0 1.1 9.2 0.6 3.4 2 1 1 3 3 3 0 Zinc ribbon domain zf-C4_Topoisom PF01396.14 gi|452210362|ref|YP_007490476.1| - 4 7.0 8.1 19 4.8 0.1 3.2 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|452210362|ref|YP_007490476.1| - 7 6.4 7.6 12 5.7 2.7 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PRC PF05239.11 gi|452210363|ref|YP_007490477.1| - 3.7e-19 68.3 0.0 4.5e-19 68.0 0.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain PRC PF05239.11 gi|452210364|ref|YP_007490478.1| - 1.4e-78 258.7 3.6 9.4e-19 67.0 0.0 4.3 4 0 0 4 4 4 4 PRC-barrel domain DUF362 PF04015.7 gi|452210365|ref|YP_007490479.1| - 5.1e-62 209.0 0.0 6.4e-62 208.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|452210365|ref|YP_007490479.1| - 4.1e-08 32.4 12.4 5.7e-05 22.5 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452210365|ref|YP_007490479.1| - 4.8e-06 26.3 11.9 9.4e-06 25.3 8.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210365|ref|YP_007490479.1| - 1.9e-05 24.2 12.9 0.015 15.2 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452210365|ref|YP_007490479.1| - 4.2e-05 23.2 15.8 0.00016 21.4 11.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210365|ref|YP_007490479.1| - 5.5e-05 23.3 14.3 0.00011 22.3 9.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210365|ref|YP_007490479.1| - 7.6e-05 23.0 13.8 0.00016 21.9 9.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210365|ref|YP_007490479.1| - 0.0004 20.1 15.4 0.0021 17.8 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452210365|ref|YP_007490479.1| - 0.018 15.5 9.7 0.025 15.1 1.1 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|452210365|ref|YP_007490479.1| - 0.026 14.5 18.0 0.1 12.6 12.0 2.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|452210365|ref|YP_007490479.1| - 0.038 13.0 0.0 0.059 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2088) Fer4_13 PF13370.1 gi|452210365|ref|YP_007490479.1| - 0.51 10.7 13.1 0.89 9.9 2.9 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|452210365|ref|YP_007490479.1| - 3.9 8.0 18.2 1.4 9.4 2.7 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.15 gi|452210366|ref|YP_007490480.1| - 6.1e-07 29.0 0.1 1.2e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452210366|ref|YP_007490480.1| - 3.1e-05 23.6 0.1 6.2e-05 22.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|452210366|ref|YP_007490480.1| - 0.00067 19.0 0.6 0.00067 19.0 0.4 2.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding z-alpha PF02295.12 gi|452210366|ref|YP_007490480.1| - 0.0009 18.9 0.6 0.0029 17.3 0.1 2.0 2 0 0 2 2 2 1 Adenosine deaminase z-alpha domain MarR PF01047.17 gi|452210366|ref|YP_007490480.1| - 0.0013 18.3 0.2 0.0031 17.1 0.1 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|452210366|ref|YP_007490480.1| - 0.002 17.7 0.1 0.0043 16.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|452210366|ref|YP_007490480.1| - 0.0083 15.6 0.3 0.02 14.3 0.2 1.6 1 0 0 1 1 1 1 TFIIE alpha subunit DUF2250 PF10007.4 gi|452210366|ref|YP_007490480.1| - 0.018 14.9 0.3 0.033 14.0 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Mga PF05043.8 gi|452210366|ref|YP_007490480.1| - 0.023 14.9 0.1 0.046 13.9 0.0 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_10 PF04967.7 gi|452210366|ref|YP_007490480.1| - 0.027 14.0 0.1 0.058 12.9 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain ANTAR PF03861.9 gi|452210366|ref|YP_007490480.1| - 0.03 13.9 0.2 6.8 6.3 0.0 2.2 2 0 0 2 2 2 0 ANTAR domain MarR_2 PF12802.2 gi|452210366|ref|YP_007490480.1| - 0.062 12.9 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.15 gi|452210366|ref|YP_007490480.1| - 0.09 12.8 0.1 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_34 PF13601.1 gi|452210366|ref|YP_007490480.1| - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cpn10 PF00166.16 gi|452210367|ref|YP_007490481.1| - 7.9e-20 70.5 1.9 8.6e-20 70.4 1.3 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit RNase_H PF00075.19 gi|452210368|ref|YP_007490482.1| - 7e-05 23.1 0.0 9.6e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 RNase H DUF165 PF02592.10 gi|452210369|ref|YP_007490483.1| - 1.4e-50 171.2 3.0 1.9e-50 170.8 2.1 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, YhhQ family COG1738 UNC-93 PF05978.11 gi|452210369|ref|YP_007490483.1| - 0.01 15.3 1.1 0.019 14.4 0.3 1.9 1 1 0 1 1 1 0 Ion channel regulatory protein UNC-93 Aminotran_1_2 PF00155.16 gi|452210372|ref|YP_007490486.1| - 1.3e-62 211.8 0.0 1.4e-62 211.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|452210372|ref|YP_007490486.1| - 3.1e-12 46.2 0.0 4.7e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|452210372|ref|YP_007490486.1| - 7.3e-09 35.1 0.0 1.1e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|452210372|ref|YP_007490486.1| - 8.9e-09 34.0 0.0 1.3e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|452210372|ref|YP_007490486.1| - 1.7e-05 23.7 0.0 2.9e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.15 gi|452210372|ref|YP_007490486.1| - 0.0041 15.7 0.0 0.0062 15.1 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Aminotran_3 PF00202.16 gi|452210372|ref|YP_007490486.1| - 0.042 12.6 0.0 0.051 12.4 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-III Rubrerythrin PF02915.12 gi|452210375|ref|YP_007490489.1| - 2e-23 83.2 12.0 2.7e-22 79.5 8.3 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|452210375|ref|YP_007490489.1| - 0.00041 20.1 3.9 0.00092 18.9 2.7 1.7 1 1 0 1 1 1 1 Ferritin-like domain DNA_ligase_ZBD PF03119.11 gi|452210375|ref|YP_007490489.1| - 0.0015 18.2 6.9 0.18 11.5 2.0 2.7 3 0 0 3 3 3 2 NAD-dependent DNA ligase C4 zinc finger domain Rad50_zn_hook PF04423.9 gi|452210375|ref|YP_007490489.1| - 0.0035 16.7 3.7 0.03 13.8 0.1 2.8 1 1 1 2 2 2 1 Rad50 zinc hook motif DZR PF12773.2 gi|452210375|ref|YP_007490489.1| - 0.012 15.4 0.5 0.02 14.7 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon Rubredoxin PF00301.15 gi|452210375|ref|YP_007490489.1| - 0.024 14.4 3.2 2.5 8.0 2.2 2.4 1 1 0 1 1 1 0 Rubredoxin Prok-RING_4 PF14447.1 gi|452210375|ref|YP_007490489.1| - 0.045 13.3 1.5 1.5 8.4 0.1 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-ribbon_3 PF13248.1 gi|452210375|ref|YP_007490489.1| - 0.1 11.8 5.9 0.21 10.8 4.1 1.5 1 1 0 1 1 1 0 zinc-ribbon domain Cys_rich_CPCC PF14206.1 gi|452210375|ref|YP_007490489.1| - 0.13 11.8 1.6 0.32 10.5 1.1 1.7 1 0 0 1 1 1 0 Cysteine-rich CPCC Ogr_Delta PF04606.7 gi|452210375|ref|YP_007490489.1| - 0.14 11.8 1.1 13 5.5 0.0 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Acetone_carb_G PF08882.6 gi|452210375|ref|YP_007490489.1| - 0.14 12.1 0.3 0.31 11.0 0.2 1.5 1 1 0 1 1 1 0 Acetone carboxylase gamma subunit FdhE PF04216.7 gi|452210375|ref|YP_007490489.1| - 0.22 11.2 4.2 2.2 7.9 0.1 2.3 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation A2L_zn_ribbon PF08792.5 gi|452210375|ref|YP_007490489.1| - 0.23 10.9 2.0 0.32 10.4 0.1 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn-ribbon_8 PF09723.5 gi|452210375|ref|YP_007490489.1| - 0.32 10.9 2.6 7.6 6.5 1.8 2.5 1 1 1 2 2 2 0 Zinc ribbon domain zf-Mss51 PF13824.1 gi|452210375|ref|YP_007490489.1| - 0.61 9.9 2.3 1.3 8.9 1.6 1.5 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 TF_Zn_Ribbon PF08271.7 gi|452210375|ref|YP_007490489.1| - 0.84 9.0 6.4 2.1 7.7 4.4 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zf-Di19 PF05605.7 gi|452210375|ref|YP_007490489.1| - 0.96 9.6 4.2 5.8 7.1 0.3 2.4 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Lar_restr_allev PF14354.1 gi|452210375|ref|YP_007490489.1| - 2 8.7 4.5 25 5.2 0.3 2.6 1 1 1 2 2 2 0 Restriction alleviation protein Lar PHP_C PF13263.1 gi|452210376|ref|YP_007490490.1| - 0.00057 19.3 0.0 0.0015 17.9 0.0 1.7 1 0 0 1 1 1 1 PHP-associated PHP PF02811.14 gi|452210376|ref|YP_007490490.1| - 0.0014 18.4 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 PHP domain zinc_ribbon_5 PF13719.1 gi|452210376|ref|YP_007490490.1| - 0.32 10.6 2.4 0.42 10.2 0.6 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|452210376|ref|YP_007490490.1| - 0.4 10.4 3.4 0.25 11.0 0.6 2.0 2 0 0 2 2 2 0 zinc-ribbon domain PAC2 PF09754.4 gi|452210377|ref|YP_007490491.1| - 1e-54 185.7 0.0 1.2e-54 185.4 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.7 gi|452210378|ref|YP_007490492.1| - 2.3e-25 88.0 0.8 2.4e-25 88.0 0.6 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.10 gi|452210378|ref|YP_007490492.1| - 9.5e-05 21.7 0.7 0.00013 21.2 0.5 1.3 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.8 gi|452210378|ref|YP_007490492.1| - 0.0062 14.2 0.5 0.0062 14.2 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 DZR PF12773.2 gi|452210378|ref|YP_007490492.1| - 0.012 15.4 0.7 0.016 15.0 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|452210378|ref|YP_007490492.1| - 0.025 13.8 5.9 0.83 8.9 0.2 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.9 gi|452210378|ref|YP_007490492.1| - 0.026 14.1 6.3 0.54 9.9 0.4 2.2 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS zf-H2C2_2 PF13465.1 gi|452210378|ref|YP_007490492.1| - 0.033 14.4 1.3 3 8.2 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain NOB1_Zn_bind PF08772.6 gi|452210378|ref|YP_007490492.1| - 0.034 13.9 0.6 0.23 11.3 0.4 1.9 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like PHF5 PF03660.9 gi|452210378|ref|YP_007490492.1| - 0.057 13.4 0.1 0.057 13.4 0.1 1.1 1 0 0 1 1 1 0 PHF5-like protein DUF1272 PF06906.6 gi|452210378|ref|YP_007490492.1| - 0.067 13.0 1.1 0.074 12.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-C3HC4_3 PF13920.1 gi|452210378|ref|YP_007490492.1| - 0.099 12.3 2.0 0.12 12.0 1.4 1.1 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_2 PF13240.1 gi|452210378|ref|YP_007490492.1| - 0.099 12.1 3.3 4.3 6.9 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.18 gi|452210378|ref|YP_007490492.1| - 0.11 12.6 1.7 9.1 6.5 0.0 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family DUF35_N PF12172.3 gi|452210378|ref|YP_007490492.1| - 0.13 12.2 4.1 1.2 9.1 2.9 2.1 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.7 gi|452210378|ref|YP_007490492.1| - 0.19 11.0 6.7 2.8 7.3 0.6 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding zf-NADH-PPase PF09297.6 gi|452210378|ref|YP_007490492.1| - 0.22 11.0 2.4 3.7 7.1 0.1 2.4 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RING_5 PF14634.1 gi|452210378|ref|YP_007490492.1| - 0.25 11.0 3.1 0.36 10.5 2.1 1.2 1 0 0 1 1 1 0 zinc-RING finger domain zf-ISL3 PF14690.1 gi|452210378|ref|YP_007490492.1| - 0.32 11.0 4.3 2.9 7.9 0.1 2.2 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cys_rich_CPCC PF14206.1 gi|452210378|ref|YP_007490492.1| - 0.33 10.5 2.1 1.7 8.2 0.1 2.0 1 1 1 2 2 2 0 Cysteine-rich CPCC UPF0547 PF10571.4 gi|452210378|ref|YP_007490492.1| - 1 9.1 5.9 5.2 6.8 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-CCHC_6 PF15288.1 gi|452210378|ref|YP_007490492.1| - 1.7 8.3 4.9 1.8 8.2 1.0 2.1 2 0 0 2 2 2 0 Zinc knuckle RRN7 PF11781.3 gi|452210378|ref|YP_007490492.1| - 2.1 7.9 4.4 3.3 7.2 0.2 2.1 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 A2L_zn_ribbon PF08792.5 gi|452210378|ref|YP_007490492.1| - 2.3 7.7 4.8 2.5 7.6 0.6 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain Sgf11 PF08209.6 gi|452210378|ref|YP_007490492.1| - 3 7.2 5.4 1.4 8.3 0.5 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Zn-ribbon_8 PF09723.5 gi|452210378|ref|YP_007490492.1| - 3 7.8 5.3 1.1e+02 2.8 3.6 2.2 1 1 0 1 1 1 0 Zinc ribbon domain DUF3797 PF12677.2 gi|452210378|ref|YP_007490492.1| - 3.3 7.3 7.4 5.8 6.6 0.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-C2HC_2 PF13913.1 gi|452210378|ref|YP_007490492.1| - 3.9 7.2 9.3 8 6.2 1.4 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-dskA_traR PF01258.12 gi|452210378|ref|YP_007490492.1| - 4.5 7.1 6.5 3.7 7.3 0.4 2.5 2 1 1 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger zf-tcix PF14952.1 gi|452210378|ref|YP_007490492.1| - 5.4 6.4 10.0 3.9 6.8 1.5 2.2 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-C2H2_3 PF13878.1 gi|452210378|ref|YP_007490492.1| - 9.3 5.9 6.3 17 5.0 1.1 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO EIF_2_alpha PF07541.7 gi|452210379|ref|YP_007490493.1| - 1.9e-27 95.2 0.0 2.9e-27 94.6 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|452210379|ref|YP_007490493.1| - 1e-13 51.1 0.2 2.6e-13 49.8 0.1 1.7 1 0 0 1 1 1 1 S1 RNA binding domain LON PF02190.11 gi|452210379|ref|YP_007490493.1| - 0.029 14.0 0.2 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 ATP-dependent protease La (LON) domain Ribosomal_S27e PF01667.12 gi|452210380|ref|YP_007490494.1| - 5e-25 86.7 0.9 5.5e-25 86.6 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 Zn_Tnp_IS91 PF14319.1 gi|452210380|ref|YP_007490494.1| - 0.0051 16.3 0.3 0.0054 16.2 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain FYVE PF01363.16 gi|452210380|ref|YP_007490494.1| - 0.025 14.4 0.3 0.028 14.3 0.2 1.2 1 0 0 1 1 1 0 FYVE zinc finger HypA PF01155.14 gi|452210380|ref|YP_007490494.1| - 0.028 14.0 0.3 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-BED PF02892.10 gi|452210380|ref|YP_007490494.1| - 0.035 13.8 2.9 0.35 10.6 0.1 2.0 1 1 1 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.5 gi|452210380|ref|YP_007490494.1| - 0.091 12.7 0.9 0.14 12.1 0.6 1.3 1 0 0 1 1 1 0 Zinc ribbon domain zf-CHY PF05495.7 gi|452210380|ref|YP_007490494.1| - 0.095 12.8 0.5 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 CHY zinc finger C1_1 PF00130.17 gi|452210380|ref|YP_007490494.1| - 0.12 12.1 0.3 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_3 PF13878.1 gi|452210380|ref|YP_007490494.1| - 0.25 10.9 1.1 11 5.6 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zinc_ribbon_6 PF14599.1 gi|452210380|ref|YP_007490494.1| - 0.26 11.0 3.0 1.1 9.0 2.0 2.0 2 1 1 3 3 3 0 Zinc-ribbon Sgf11 PF08209.6 gi|452210380|ref|YP_007490494.1| - 0.27 10.5 3.4 0.76 9.1 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-trcl PF13451.1 gi|452210380|ref|YP_007490494.1| - 0.68 9.6 4.3 3.1 7.5 0.4 2.1 1 1 1 2 2 2 0 Probable zinc-binding domain Ribosomal_L44 PF00935.14 gi|452210381|ref|YP_007490495.1| - 5.8e-28 96.7 7.7 8e-28 96.2 5.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L44 Thioredoxin_4 PF13462.1 gi|452210381|ref|YP_007490495.1| - 0.51 10.3 2.9 4.6 7.2 0.1 2.1 2 0 0 2 2 2 0 Thioredoxin DNA_primase_S PF01896.14 gi|452210385|ref|YP_007490499.1| - 5e-21 75.0 0.0 2.7e-20 72.6 0.0 2.1 2 1 0 2 2 2 1 Eukaryotic and archaeal DNA primase small subunit FGE-sulfatase PF03781.11 gi|452210387|ref|YP_007490501.1| - 1.9e-54 184.7 10.5 2.1e-53 181.3 7.3 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FbpA PF05833.6 gi|452210388|ref|YP_007490502.1| - 1.7e-117 392.8 5.8 2.2e-117 392.3 4.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|452210388|ref|YP_007490502.1| - 4e-29 100.3 0.0 9.3e-29 99.1 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF814) PEP-utilisers_N PF05524.8 gi|452210388|ref|YP_007490502.1| - 1.9 8.3 6.6 15 5.4 0.1 3.9 3 1 0 3 3 3 0 PEP-utilising enzyme, N-terminal eRF1_1 PF03463.10 gi|452210389|ref|YP_007490503.1| - 1.5e-34 118.3 0.8 2.6e-34 117.6 0.6 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 gi|452210389|ref|YP_007490503.1| - 8.2e-24 84.0 0.8 2.5e-23 82.5 0.2 2.1 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|452210389|ref|YP_007490503.1| - 4.4e-21 75.5 0.1 7.1e-21 74.9 0.1 1.3 1 0 0 1 1 1 1 eRF1 domain 2 S-layer PF07752.6 gi|452210390|ref|YP_007490504.1| - 1.2e-97 326.1 9.3 1.5e-97 325.8 6.4 1.1 1 0 0 1 1 1 1 S-layer protein Methylase_S PF01420.14 gi|452210390|ref|YP_007490504.1| - 0.32 10.9 6.1 1.2 9.0 4.2 1.9 1 1 0 1 1 1 0 Type I restriction modification DNA specificity domain HCV_NS5a PF01506.14 gi|452210391|ref|YP_007490505.1| - 0.12 12.0 1.2 0.3 10.7 0.8 1.7 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor DUF1614 PF07758.6 gi|452210392|ref|YP_007490506.1| - 9.9e-55 184.9 13.1 1.3e-54 184.5 9.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1614) DisA_N PF02457.11 gi|452210393|ref|YP_007490507.1| - 8e-29 99.2 0.2 1.5e-28 98.3 0.1 1.4 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding LigT_PEase PF02834.11 gi|452210394|ref|YP_007490508.1| - 1.8e-30 104.7 0.0 3e-16 59.1 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.1 gi|452210394|ref|YP_007490508.1| - 2e-13 50.3 0.0 2.3e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.4 gi|452210394|ref|YP_007490508.1| - 3.2e-09 36.8 0.0 3.7e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain B PF02216.11 gi|452210394|ref|YP_007490508.1| - 0.048 13.4 0.2 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 B domain Rep_fac_C PF08542.6 gi|452210395|ref|YP_007490509.1| - 1.9e-19 69.4 0.0 4.2e-19 68.3 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.1 gi|452210395|ref|YP_007490509.1| - 0.00064 19.4 0.1 0.0011 18.6 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Sm_multidrug_ex PF06695.6 gi|452210396|ref|YP_007490510.1| - 1e-43 148.3 1.0 1.5e-43 147.8 0.7 1.2 1 0 0 1 1 1 1 Putative small multi-drug export protein SNARE_assoc PF09335.6 gi|452210396|ref|YP_007490510.1| - 0.0045 17.1 10.6 0.035 14.3 2.0 2.4 2 0 0 2 2 2 2 SNARE associated Golgi protein PIRT PF15099.1 gi|452210396|ref|YP_007490510.1| - 0.17 11.0 0.7 0.28 10.4 0.5 1.4 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family DUF3317 PF11779.3 gi|452210396|ref|YP_007490510.1| - 1.5 8.3 4.9 0.26 10.7 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3317) Fer4 PF00037.22 gi|452210397|ref|YP_007490511.1| - 5.8e-16 57.3 14.4 5.8e-09 35.1 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452210397|ref|YP_007490511.1| - 1.1e-15 57.6 31.8 3.1e-09 37.0 8.0 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210397|ref|YP_007490511.1| - 6.5e-13 47.9 12.6 1.1e-06 28.1 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452210397|ref|YP_007490511.1| - 2.9e-12 46.2 7.9 3e-06 26.9 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210397|ref|YP_007490511.1| - 3e-12 45.7 14.6 1e-06 28.2 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452210397|ref|YP_007490511.1| - 3.9e-12 46.2 21.2 1.7e-08 34.5 7.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210397|ref|YP_007490511.1| - 1e-11 44.5 11.6 1e-06 28.4 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210397|ref|YP_007490511.1| - 2.8e-11 43.2 19.6 1.4e-09 37.8 6.1 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452210397|ref|YP_007490511.1| - 4.6e-08 32.7 13.4 2.4e-05 24.3 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210397|ref|YP_007490511.1| - 7e-08 33.1 9.5 0.00033 21.3 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|452210397|ref|YP_007490511.1| - 2e-07 31.3 8.0 0.00088 19.6 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452210397|ref|YP_007490511.1| - 1.3e-06 28.5 17.9 0.0047 17.3 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452210397|ref|YP_007490511.1| - 6.3e-06 26.4 21.8 0.00017 21.8 8.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210397|ref|YP_007490511.1| - 3.2e-05 24.4 8.6 0.013 15.9 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452210397|ref|YP_007490511.1| - 4.9e-05 23.6 12.9 0.0096 16.2 2.0 2.6 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|452210397|ref|YP_007490511.1| - 0.0057 16.5 4.8 0.015 15.2 2.4 1.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|452210397|ref|YP_007490511.1| - 0.0058 16.2 7.1 0.34 10.5 1.0 2.0 1 1 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E6 PF00518.12 gi|452210397|ref|YP_007490511.1| - 0.053 13.8 2.7 0.059 13.7 1.9 1.1 1 0 0 1 1 1 0 Early Protein (E6) DUF678 PF05077.7 gi|452210397|ref|YP_007490511.1| - 2.3 8.2 7.9 0.96 9.4 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) CBFD_NFYB_HMF PF00808.18 gi|452210398|ref|YP_007490512.1| - 2.2e-16 59.6 0.2 2.7e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|452210398|ref|YP_007490512.1| - 1.9e-11 43.9 0.2 2.3e-11 43.6 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Bromo_TP PF07524.8 gi|452210398|ref|YP_007490512.1| - 5.6e-06 26.0 0.0 6.7e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated CENP-S PF15630.1 gi|452210398|ref|YP_007490512.1| - 1.3e-05 25.2 0.0 1.5e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S CENP-T PF15511.1 gi|452210398|ref|YP_007490512.1| - 0.0012 18.2 0.0 0.0012 18.1 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T TFIID-31kDa PF02291.10 gi|452210398|ref|YP_007490512.1| - 0.0012 18.6 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TAF PF02969.12 gi|452210398|ref|YP_007490512.1| - 0.0048 16.8 0.1 0.0054 16.6 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.11 gi|452210398|ref|YP_007490512.1| - 0.024 14.4 0.0 0.026 14.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit Peptidase_C39 PF03412.10 gi|452210398|ref|YP_007490512.1| - 0.04 13.7 0.1 0.041 13.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase C39 family TFIID_20kDa PF03847.8 gi|452210398|ref|YP_007490512.1| - 0.061 13.6 0.0 0.068 13.4 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.5 gi|452210398|ref|YP_007490512.1| - 0.061 13.2 1.0 0.21 11.4 0.2 2.0 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit DUF2703 PF10865.3 gi|452210398|ref|YP_007490512.1| - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) Methyltransf_25 PF13649.1 gi|452210399|ref|YP_007490513.1| - 8.5e-09 35.7 0.0 1.7e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452210399|ref|YP_007490513.1| - 0.00016 21.6 0.1 0.00033 20.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210399|ref|YP_007490513.1| - 0.00048 20.6 0.0 0.0027 18.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210399|ref|YP_007490513.1| - 0.0029 18.0 0.0 0.0082 16.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210399|ref|YP_007490513.1| - 0.0042 16.8 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210399|ref|YP_007490513.1| - 0.018 14.3 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain DUF4340 PF14238.1 gi|452210399|ref|YP_007490513.1| - 0.025 14.2 0.0 0.041 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4340) tRNA_U5-meth_tr PF05958.6 gi|452210399|ref|YP_007490513.1| - 0.042 12.5 0.0 0.08 11.6 0.0 1.4 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DASH_Dam1 PF08653.5 gi|452210399|ref|YP_007490513.1| - 0.071 12.8 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF1793 PF08760.6 gi|452210399|ref|YP_007490513.1| - 0.075 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1793) PYC_OADA PF02436.13 gi|452210403|ref|YP_007490517.1| - 2e-65 219.9 0.1 3.5e-65 219.1 0.1 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.14 gi|452210403|ref|YP_007490517.1| - 2e-43 148.7 0.0 2.9e-43 148.2 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.17 gi|452210403|ref|YP_007490517.1| - 6.9e-17 60.8 2.6 6.9e-17 60.8 1.8 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|452210403|ref|YP_007490517.1| - 3.4e-09 36.2 0.4 3.3e-05 23.4 0.1 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.1 gi|452210403|ref|YP_007490517.1| - 2.8e-05 24.4 1.8 0.021 15.1 0.0 2.8 3 0 0 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.1 gi|452210403|ref|YP_007490517.1| - 0.00017 21.2 0.9 0.00081 19.0 0.3 2.4 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_2 PF12700.2 gi|452210403|ref|YP_007490517.1| - 0.00049 19.3 0.2 0.1 11.7 0.0 2.3 1 1 1 2 2 2 2 HlyD family secretion protein HlyD PF00529.15 gi|452210403|ref|YP_007490517.1| - 0.0016 17.8 0.4 0.029 13.6 0.0 2.2 1 1 1 2 2 2 1 HlyD family secretion protein NQRA PF05896.6 gi|452210403|ref|YP_007490517.1| - 0.023 13.8 0.2 0.041 13.0 0.1 1.4 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GCV_H PF01597.14 gi|452210403|ref|YP_007490517.1| - 0.026 14.1 0.5 0.082 12.5 0.3 1.9 1 0 0 1 1 1 0 Glycine cleavage H-protein CPSase_L_D2 PF02786.12 gi|452210404|ref|YP_007490518.1| - 3.7e-82 274.7 0.1 5.9e-82 274.0 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|452210404|ref|YP_007490518.1| - 6.6e-45 151.7 1.0 1.6e-44 150.4 0.0 2.2 3 0 0 3 3 2 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 gi|452210404|ref|YP_007490518.1| - 2.1e-42 143.4 0.0 4e-42 142.5 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_4 PF13535.1 gi|452210404|ref|YP_007490518.1| - 2.2e-17 63.4 0.0 5.5e-17 62.1 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452210404|ref|YP_007490518.1| - 1.5e-16 60.0 0.0 1e-15 57.3 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|452210404|ref|YP_007490518.1| - 2.2e-14 53.3 0.1 6.7e-14 51.7 0.0 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|452210404|ref|YP_007490518.1| - 4.2e-12 45.9 0.0 4.9e-11 42.4 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.17 gi|452210404|ref|YP_007490518.1| - 4.2e-08 32.7 0.1 7.7e-08 31.8 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|452210404|ref|YP_007490518.1| - 6.4e-08 32.6 0.0 1.4e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|452210404|ref|YP_007490518.1| - 1.9e-05 24.3 0.4 3.6e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.1 gi|452210404|ref|YP_007490518.1| - 0.00041 19.6 0.1 0.0011 18.1 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain OAD_gamma PF04277.8 gi|452210404|ref|YP_007490518.1| - 0.019 15.3 3.1 0.054 13.8 2.2 1.7 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain BPL_LplA_LipB PF03099.14 gi|452210405|ref|YP_007490519.1| - 4.7e-24 84.7 0.0 7.8e-24 84.0 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.7 gi|452210405|ref|YP_007490519.1| - 3.8e-17 61.6 0.6 7.8e-17 60.6 0.1 1.8 2 0 0 2 2 2 1 HTH domain BPL_C PF02237.12 gi|452210405|ref|YP_007490519.1| - 6.6e-11 41.7 0.1 1.9e-10 40.2 0.0 1.8 2 0 0 2 2 2 1 Biotin protein ligase C terminal domain HTH_24 PF13412.1 gi|452210405|ref|YP_007490519.1| - 0.0002 20.6 0.0 0.00038 19.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.1 gi|452210405|ref|YP_007490519.1| - 0.015 15.2 0.1 0.045 13.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|452210405|ref|YP_007490519.1| - 0.043 13.4 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain S-layer PF07752.6 gi|452210406|ref|YP_007490520.1| - 2.2e-08 33.6 0.1 2.7e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 S-layer protein CENP-F_leu_zip PF10473.4 gi|452210407|ref|YP_007490521.1| - 0.00016 21.5 13.2 0.00016 21.5 9.1 2.9 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IncA PF04156.9 gi|452210407|ref|YP_007490521.1| - 0.0057 16.2 10.9 0.0057 16.2 7.5 3.1 1 1 2 3 3 3 2 IncA protein Seryl_tRNA_N PF02403.17 gi|452210407|ref|YP_007490521.1| - 0.012 15.6 34.9 0.032 14.2 5.5 4.5 1 1 3 5 5 5 0 Seryl-tRNA synthetase N-terminal domain DUF1664 PF07889.7 gi|452210407|ref|YP_007490521.1| - 0.024 14.4 23.8 0.89 9.3 1.4 4.2 2 1 1 4 4 4 0 Protein of unknown function (DUF1664) HsbA PF12296.3 gi|452210407|ref|YP_007490521.1| - 0.025 14.4 5.2 0.08 12.8 0.1 3.7 3 1 2 5 5 5 0 Hydrophobic surface binding protein A Reo_sigmaC PF04582.7 gi|452210407|ref|YP_007490521.1| - 0.15 11.2 10.3 0.26 10.4 0.7 2.9 1 1 1 2 2 2 0 Reovirus sigma C capsid protein MCPsignal PF00015.16 gi|452210407|ref|YP_007490521.1| - 0.21 11.1 11.1 2 7.8 0.9 2.8 1 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Spc7 PF08317.6 gi|452210407|ref|YP_007490521.1| - 0.31 9.6 36.7 0.12 10.9 8.7 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein V_ATPase_I PF01496.14 gi|452210407|ref|YP_007490521.1| - 0.34 8.7 24.6 0.58 7.9 16.5 1.7 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family NPV_P10 PF05531.7 gi|452210407|ref|YP_007490521.1| - 0.53 10.5 14.5 0.86 9.8 1.0 4.7 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein IL5 PF02025.10 gi|452210407|ref|YP_007490521.1| - 0.63 10.0 4.8 2.7 8.0 0.1 3.0 2 1 0 3 3 3 0 Interleukin 5 DUF3450 PF11932.3 gi|452210407|ref|YP_007490521.1| - 0.65 9.2 21.1 0.17 11.0 2.3 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) WEMBL PF05701.6 gi|452210407|ref|YP_007490521.1| - 1.2 7.5 37.8 10 4.4 26.2 2.1 1 1 0 1 1 1 0 Weak chloroplast movement under blue light DUF948 PF06103.6 gi|452210407|ref|YP_007490521.1| - 1.3 8.9 11.1 4.1 7.3 1.1 4.1 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.4 gi|452210407|ref|YP_007490521.1| - 1.9 7.3 36.8 0.11 11.4 5.6 2.9 1 1 1 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 APG6 PF04111.7 gi|452210407|ref|YP_007490521.1| - 2.5 7.0 37.1 0.57 9.1 7.5 3.0 1 1 1 3 3 3 0 Autophagy protein Apg6 Nup54 PF13874.1 gi|452210407|ref|YP_007490521.1| - 6 6.5 26.3 35 4.0 7.6 4.1 1 1 0 2 2 2 0 Nucleoporin complex subunit 54 DUF972 PF06156.8 gi|452210407|ref|YP_007490521.1| - 8.8 6.7 30.9 2.6 8.4 1.8 4.1 2 2 1 3 3 3 0 Protein of unknown function (DUF972) Plasmid_killer PF05015.8 gi|452210407|ref|YP_007490521.1| - 9.5 6.4 10.6 5.5 7.2 0.4 3.2 2 1 1 3 3 3 0 Plasmid maintenance system killer protein Mnd1 PF03962.10 gi|452210408|ref|YP_007490522.1| - 0.00069 19.3 5.8 0.00069 19.3 4.0 2.2 1 1 1 2 2 2 1 Mnd1 family Peptidase_M75 PF09375.5 gi|452210408|ref|YP_007490522.1| - 0.015 14.6 1.9 0.28 10.4 0.3 2.1 2 0 0 2 2 2 0 Imelysin CorA PF01544.13 gi|452210408|ref|YP_007490522.1| - 0.63 9.0 5.2 0.68 8.9 2.6 1.6 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Fib_alpha PF08702.5 gi|452210408|ref|YP_007490522.1| - 0.63 10.1 11.6 0.58 10.2 1.9 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family CHASE3 PF05227.8 gi|452210408|ref|YP_007490522.1| - 1.2 8.8 6.7 0.49 10.0 1.7 2.0 1 1 1 2 2 2 0 CHASE3 domain Endotoxin_N PF03945.9 gi|452210408|ref|YP_007490522.1| - 1.2 8.4 3.4 1.9 7.8 0.4 2.2 2 1 0 2 2 2 0 delta endotoxin, N-terminal domain Nup54 PF13874.1 gi|452210408|ref|YP_007490522.1| - 2.1 7.9 9.9 5.3 6.7 0.2 2.6 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF424 PF04242.8 gi|452210409|ref|YP_007490523.1| - 3.7e-32 110.2 0.2 4.2e-32 110.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) Plectin PF00681.15 gi|452210409|ref|YP_007490523.1| - 0.096 12.2 0.0 0.82 9.2 0.0 2.3 2 1 1 3 3 3 0 Plectin repeat RNase_PH_C PF03725.10 gi|452210409|ref|YP_007490523.1| - 1.3 8.9 4.4 3.9 7.4 0.2 2.4 2 1 0 2 2 2 0 3' exoribonuclease family, domain 2 MCM PF00493.18 gi|452210410|ref|YP_007490524.1| - 7.6e-133 442.3 0.0 1.1e-132 441.8 0.0 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 gi|452210410|ref|YP_007490524.1| - 1.1e-16 61.4 0.3 5.7e-16 59.0 0.1 2.4 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|452210410|ref|YP_007490524.1| - 1.6e-06 27.4 0.1 0.00015 21.0 0.0 2.3 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|452210410|ref|YP_007490524.1| - 1.4e-05 24.8 0.0 4.2e-05 23.2 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|452210410|ref|YP_007490524.1| - 0.0048 16.5 0.1 0.023 14.2 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|452210410|ref|YP_007490524.1| - 0.035 13.9 0.0 13 5.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain tRNA_anti-codon PF01336.20 gi|452210410|ref|YP_007490524.1| - 0.12 12.2 0.1 0.59 10.0 0.0 2.1 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain SpoU_methylase PF00588.14 gi|452210411|ref|YP_007490525.1| - 1.1e-31 109.6 0.0 1.5e-31 109.1 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family OTCace PF00185.19 gi|452210411|ref|YP_007490525.1| - 0.021 14.7 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Methyltrn_RNA_4 PF09936.4 gi|452210411|ref|YP_007490525.1| - 0.029 13.8 0.0 0.06 12.8 0.0 1.5 1 1 0 1 1 1 0 SAM-dependent RNA methyltransferase AdoHcyase_NAD PF00670.16 gi|452210411|ref|YP_007490525.1| - 0.1 12.4 0.0 0.28 11.0 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4_7 PF12838.2 gi|452210412|ref|YP_007490526.1| - 1.2e-13 51.1 27.8 3e-09 37.1 11.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452210412|ref|YP_007490526.1| - 1.8e-13 49.4 14.2 8.4e-09 34.6 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452210412|ref|YP_007490526.1| - 1.5e-11 43.6 16.4 2.6e-07 30.2 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452210412|ref|YP_007490526.1| - 1.1e-10 40.7 17.0 5.9e-08 32.1 2.5 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452210412|ref|YP_007490526.1| - 3.6e-10 39.4 15.0 7.2e-10 38.5 10.5 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210412|ref|YP_007490526.1| - 4.1e-09 36.1 11.5 5.2e-09 35.8 8.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210412|ref|YP_007490526.1| - 2.5e-08 34.0 30.3 6.7e-06 26.2 12.1 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210412|ref|YP_007490526.1| - 1.1e-07 32.3 1.2 1.1e-07 32.3 0.8 2.1 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|452210412|ref|YP_007490526.1| - 2.8e-06 27.2 16.6 0.00011 22.2 2.1 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452210412|ref|YP_007490526.1| - 1.9e-05 24.5 17.2 7e-05 22.7 12.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452210412|ref|YP_007490526.1| - 6.6e-05 23.2 3.9 6.6e-05 23.2 2.7 2.3 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|452210412|ref|YP_007490526.1| - 0.00037 20.8 18.6 0.013 15.9 3.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452210412|ref|YP_007490526.1| - 0.0013 19.4 15.6 0.11 13.2 3.0 2.3 1 1 3 4 4 4 4 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|452210412|ref|YP_007490526.1| - 0.0027 18.0 17.5 0.024 14.9 3.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452210412|ref|YP_007490526.1| - 0.02 15.4 24.2 0.023 15.2 4.8 2.5 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452210412|ref|YP_007490526.1| - 0.14 12.0 8.7 0.43 10.4 6.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452210412|ref|YP_007490526.1| - 1.7 8.5 8.7 4.9 7.0 0.4 2.2 1 1 1 2 2 2 0 Divergent 4Fe-4S mono-cluster DUF678 PF05077.7 gi|452210412|ref|YP_007490526.1| - 9.3 6.3 9.8 11 6.0 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) Peptidase_C39_2 PF13529.1 gi|452210413|ref|YP_007490527.1| - 5.7e-14 52.6 3.8 5.7e-14 52.6 2.6 2.2 2 1 0 2 2 2 1 Peptidase_C39 like family Peptidase_C1 PF00112.18 gi|452210413|ref|YP_007490527.1| - 1.1 9.0 11.1 0.16 11.8 0.4 2.4 2 0 0 2 2 2 0 Papain family cysteine protease NosD PF05048.8 gi|452210414|ref|YP_007490528.1| - 0.00036 19.7 22.5 0.001 18.3 15.6 1.6 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) H_lectin PF09458.5 gi|452210414|ref|YP_007490528.1| - 0.15 11.6 0.9 0.98 9.1 0.0 2.3 2 0 0 2 2 2 0 H-type lectin domain Beta_helix PF13229.1 gi|452210414|ref|YP_007490528.1| - 0.99 9.1 29.0 4.6 6.9 20.1 1.8 1 1 0 1 1 1 0 Right handed beta helix region NIR_SIR PF01077.17 gi|452210415|ref|YP_007490529.1| - 1e-36 125.6 0.1 1.4e-36 125.2 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|452210415|ref|YP_007490529.1| - 2.1e-15 56.1 0.0 3.2e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain PMBR PF09373.5 gi|452210415|ref|YP_007490529.1| - 0.057 13.3 0.1 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat Nitrate_red_gam PF02665.9 gi|452210416|ref|YP_007490530.1| - 4e-07 29.6 7.8 1.1e-05 24.9 0.9 2.4 2 0 0 2 2 2 2 Nitrate reductase gamma subunit CCG PF02754.11 gi|452210417|ref|YP_007490531.1| - 9.8e-36 121.6 2.7 3.8e-19 68.4 0.3 2.9 4 0 0 4 4 3 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|452210417|ref|YP_007490531.1| - 2.6e-09 36.9 3.3 2.6e-09 36.9 2.3 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210417|ref|YP_007490531.1| - 1.1e-08 35.2 5.5 1.1e-08 35.2 3.8 2.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452210417|ref|YP_007490531.1| - 3.1e-08 33.8 3.4 3.1e-08 33.8 2.3 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210417|ref|YP_007490531.1| - 8.9e-08 32.2 12.3 0.00082 19.5 0.6 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452210417|ref|YP_007490531.1| - 4.5e-07 30.1 11.3 0.0049 17.2 0.3 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210417|ref|YP_007490531.1| - 1.5e-06 27.8 7.4 1.5e-06 27.8 5.2 3.0 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452210417|ref|YP_007490531.1| - 7.8e-05 22.0 13.1 0.006 16.1 1.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210417|ref|YP_007490531.1| - 0.00026 21.6 13.4 0.00048 20.8 6.8 3.0 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|452210417|ref|YP_007490531.1| - 0.00079 19.2 16.2 0.013 15.3 1.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452210417|ref|YP_007490531.1| - 0.00097 18.9 8.6 0.11 12.4 0.4 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210417|ref|YP_007490531.1| - 0.012 15.4 1.8 0.012 15.4 1.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452210417|ref|YP_007490531.1| - 0.017 15.6 4.2 0.017 15.6 2.9 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452210417|ref|YP_007490531.1| - 0.15 12.6 7.4 2 9.0 0.2 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF581 PF04570.9 gi|452210417|ref|YP_007490531.1| - 9.4 5.6 8.4 0.3 10.4 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF581) DUF116 PF01976.12 gi|452210418|ref|YP_007490532.1| - 1.3e-43 148.2 6.2 1.6e-43 147.9 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane PF01061.19 gi|452210418|ref|YP_007490532.1| - 0.0081 15.3 3.3 0.011 14.9 2.3 1.1 1 0 0 1 1 1 1 ABC-2 type transporter HIG_1_N PF04588.8 gi|452210418|ref|YP_007490532.1| - 0.11 12.2 1.1 0.3 10.8 0.8 1.8 1 1 0 1 1 1 0 Hypoxia induced protein conserved region ABC2_membrane_3 PF12698.2 gi|452210418|ref|YP_007490532.1| - 0.95 8.4 5.3 1.3 8.0 3.7 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF116 PF01976.12 gi|452210419|ref|YP_007490533.1| - 3.1e-42 143.7 0.4 3.9e-42 143.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF116 NAD_binding_8 PF13450.1 gi|452210420|ref|YP_007490534.1| - 1.5e-09 37.6 0.2 6.7e-08 32.4 0.0 3.0 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|452210420|ref|YP_007490534.1| - 4.9e-05 21.9 0.3 0.0001 20.9 0.0 1.7 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.22 gi|452210420|ref|YP_007490534.1| - 7e-05 23.1 0.1 0.0011 19.3 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|452210420|ref|YP_007490534.1| - 9.4e-05 21.4 0.4 0.0015 17.5 0.1 2.2 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|452210420|ref|YP_007490534.1| - 0.00049 19.0 0.0 0.0033 16.3 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|452210420|ref|YP_007490534.1| - 0.0025 17.7 0.3 0.004 17.0 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|452210420|ref|YP_007490534.1| - 0.015 15.4 0.1 0.043 13.8 0.0 1.8 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|452210420|ref|YP_007490534.1| - 0.025 13.6 0.0 0.044 12.8 0.0 1.4 1 0 0 1 1 1 0 Thi4 family GIDA PF01134.17 gi|452210420|ref|YP_007490534.1| - 0.041 12.7 0.0 0.066 12.0 0.0 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A SE PF08491.5 gi|452210420|ref|YP_007490534.1| - 0.049 12.4 0.0 0.082 11.7 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase NAD_Gly3P_dh_N PF01210.18 gi|452210420|ref|YP_007490534.1| - 0.05 13.3 0.0 0.099 12.3 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA_assoc_3 PF13932.1 gi|452210420|ref|YP_007490534.1| - 0.073 13.1 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 GidA associated domain 3 FAD_binding_3 PF01494.14 gi|452210420|ref|YP_007490534.1| - 0.14 11.1 0.0 1.1 8.1 0.0 2.0 2 0 0 2 2 2 0 FAD binding domain Trp_halogenase PF04820.9 gi|452210421|ref|YP_007490535.1| - 1.8e-11 43.3 0.0 5.5e-08 31.8 0.0 2.0 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.14 gi|452210421|ref|YP_007490535.1| - 6.5e-11 41.8 0.0 1.4e-08 34.2 0.0 2.9 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|452210421|ref|YP_007490535.1| - 9.2e-11 41.2 0.2 3.5e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|452210421|ref|YP_007490535.1| - 1.5e-07 30.8 0.0 2.2e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|452210421|ref|YP_007490535.1| - 1e-06 28.7 0.0 2.5e-06 27.5 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|452210421|ref|YP_007490535.1| - 1.1e-06 27.3 0.1 0.0035 15.8 0.0 2.7 3 0 0 3 3 3 2 HI0933-like protein NAD_binding_8 PF13450.1 gi|452210421|ref|YP_007490535.1| - 0.00045 20.1 0.1 0.01 15.8 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|452210421|ref|YP_007490535.1| - 0.00076 18.6 0.1 0.0018 17.4 0.0 1.6 2 0 0 2 2 2 1 Thi4 family PCNA_N PF00705.13 gi|452210421|ref|YP_007490535.1| - 0.0011 18.4 0.1 0.0019 17.6 0.0 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Lycopene_cycl PF05834.7 gi|452210421|ref|YP_007490535.1| - 0.0013 17.7 0.0 0.016 14.1 0.0 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox PF00070.22 gi|452210421|ref|YP_007490535.1| - 0.0042 17.4 0.1 4.1 7.8 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|452210421|ref|YP_007490535.1| - 0.0045 15.9 0.0 0.0083 15.0 0.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|452210421|ref|YP_007490535.1| - 0.0069 15.2 0.1 0.014 14.2 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|452210421|ref|YP_007490535.1| - 0.073 13.1 0.0 0.17 11.9 0.0 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Dus PF01207.12 gi|452210423|ref|YP_007490537.1| - 2.8e-13 49.3 0.1 7.1e-13 48.0 0.0 1.6 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|452210423|ref|YP_007490537.1| - 2.4e-07 30.2 0.1 5.9e-07 28.9 0.1 1.6 1 1 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|452210423|ref|YP_007490537.1| - 0.0011 17.8 0.1 0.0017 17.3 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CitG PF01874.11 gi|452210424|ref|YP_007490538.1| - 1.4e-101 339.3 0.0 1.7e-101 339.0 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.7 gi|452210425|ref|YP_007490539.1| - 4.5e-57 192.4 0.0 5.1e-57 192.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Flavoprotein PF02441.14 gi|452210426|ref|YP_007490540.1| - 2.9e-18 65.7 0.0 4.2e-18 65.2 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.22 gi|452210426|ref|YP_007490540.1| - 3.4e-08 32.7 12.4 2e-07 30.3 1.5 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452210426|ref|YP_007490540.1| - 3.6e-06 26.7 2.9 5.4e-06 26.2 2.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452210426|ref|YP_007490540.1| - 1.3e-05 25.7 8.6 0.0016 19.1 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|452210426|ref|YP_007490540.1| - 2.2e-05 24.1 12.7 0.0025 17.6 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452210426|ref|YP_007490540.1| - 2.3e-05 24.6 22.9 0.0004 20.7 1.2 2.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210426|ref|YP_007490540.1| - 2.5e-05 24.4 22.3 0.0008 19.6 1.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210426|ref|YP_007490540.1| - 0.00023 21.1 1.0 0.036 14.0 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210426|ref|YP_007490540.1| - 0.00031 20.5 10.6 0.00055 19.7 7.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210426|ref|YP_007490540.1| - 0.00032 20.4 13.2 0.00076 19.2 9.3 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210426|ref|YP_007490540.1| - 0.00073 19.3 11.3 0.0062 16.3 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452210426|ref|YP_007490540.1| - 0.017 15.4 0.5 0.017 15.4 0.4 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210426|ref|YP_007490540.1| - 0.21 12.1 0.3 0.21 12.1 0.2 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452210426|ref|YP_007490540.1| - 2.2 8.7 13.0 0.85 10.0 0.5 3.3 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452210426|ref|YP_007490540.1| - 3.6 8.3 14.9 0.1 13.2 2.8 3.0 2 1 0 2 2 2 0 4Fe-4S binding domain ABC_tran PF00005.22 gi|452210427|ref|YP_007490541.1| - 7.3e-29 100.8 0.0 1e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210427|ref|YP_007490541.1| - 1.5e-07 31.6 0.1 4.2e-06 26.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452210427|ref|YP_007490541.1| - 4.2e-05 22.8 0.0 9.5e-05 21.7 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452210427|ref|YP_007490541.1| - 0.011 15.2 0.0 0.02 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|452210427|ref|YP_007490541.1| - 0.082 12.0 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|452210427|ref|YP_007490541.1| - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 gi|452210428|ref|YP_007490542.1| - 1.2e-21 77.4 0.0 1.5e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|452210428|ref|YP_007490542.1| - 9.4e-16 57.9 0.8 1.9e-15 56.9 0.5 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.1 gi|452210428|ref|YP_007490542.1| - 0.0026 17.2 0.0 0.0048 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452210428|ref|YP_007490542.1| - 0.006 16.5 0.2 0.01 15.8 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.16 gi|452210428|ref|YP_007490542.1| - 0.02 14.0 0.0 0.032 13.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.1 gi|452210428|ref|YP_007490542.1| - 0.024 14.7 0.1 0.055 13.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|452210428|ref|YP_007490542.1| - 0.033 13.6 0.0 0.08 12.3 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF258 PF03193.11 gi|452210428|ref|YP_007490542.1| - 0.086 12.0 0.1 0.19 10.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA PF00004.24 gi|452210428|ref|YP_007490542.1| - 0.087 13.0 0.1 0.15 12.2 0.1 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 gi|452210428|ref|YP_007490542.1| - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.14 gi|452210428|ref|YP_007490542.1| - 0.13 11.4 0.0 0.45 9.6 0.0 1.7 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.17 gi|452210429|ref|YP_007490543.1| - 9.1e-19 67.6 9.0 9.1e-19 67.6 6.2 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|452210429|ref|YP_007490543.1| - 0.007 15.7 0.1 0.027 13.8 0.1 2.0 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.17 gi|452210430|ref|YP_007490544.1| - 2.3e-28 98.9 8.8 2e-27 95.9 6.1 2.1 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_YMGG PF13441.1 gi|452210430|ref|YP_007490544.1| - 0.11 12.0 0.1 0.19 11.2 0.1 1.3 1 0 0 1 1 1 0 YMGG-like Gly-zipper SBP_bac_5 PF00496.17 gi|452210431|ref|YP_007490545.1| - 4.7e-68 229.7 1.0 6.4e-68 229.2 0.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PHP PF02811.14 gi|452210432|ref|YP_007490546.1| - 4.6e-05 23.2 0.0 6.9e-05 22.7 0.0 1.6 1 1 0 1 1 1 1 PHP domain EFhand_Ca_insen PF08726.5 gi|452210432|ref|YP_007490546.1| - 0.029 14.3 0.0 0.076 12.9 0.0 1.7 1 0 0 1 1 1 0 Ca2+ insensitive EF hand PHP_C PF13263.1 gi|452210432|ref|YP_007490546.1| - 0.032 13.7 0.0 0.065 12.7 0.0 1.6 1 0 0 1 1 1 0 PHP-associated PDDEXK_4 PF14281.1 gi|452210433|ref|YP_007490547.1| - 0.02 14.7 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Somatostatin PF03002.10 gi|452210434|ref|YP_007490548.1| - 0.21 11.2 2.1 0.41 10.3 1.5 1.5 1 0 0 1 1 1 0 Somatostatin/Cortistatin family Prefoldin_2 PF01920.15 gi|452210435|ref|YP_007490549.1| - 6.6e-05 22.6 8.4 0.087 12.5 5.5 2.6 1 1 0 1 1 1 1 Prefoldin subunit GAS PF13851.1 gi|452210435|ref|YP_007490549.1| - 0.00059 19.0 7.5 0.0026 16.9 1.3 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.5 gi|452210435|ref|YP_007490549.1| - 0.00063 19.8 8.7 0.00079 19.5 6.1 1.2 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family IncA PF04156.9 gi|452210435|ref|YP_007490549.1| - 0.00069 19.2 10.3 0.016 14.7 1.7 2.0 1 1 1 2 2 2 2 IncA protein FliJ PF02050.11 gi|452210435|ref|YP_007490549.1| - 0.00097 19.1 0.8 0.004 17.2 0.1 1.9 1 1 1 2 2 2 1 Flagellar FliJ protein Hemerythrin PF01814.18 gi|452210435|ref|YP_007490549.1| - 0.0011 19.1 0.2 0.0023 18.1 0.1 1.6 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain Spc7 PF08317.6 gi|452210435|ref|YP_007490549.1| - 0.0015 17.2 12.3 0.0016 17.1 8.5 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Baculo_PEP_C PF04513.7 gi|452210435|ref|YP_007490549.1| - 0.0021 17.9 4.6 2.7 7.8 0.1 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2730 PF10805.3 gi|452210435|ref|YP_007490549.1| - 0.0029 17.3 4.4 0.0045 16.7 0.5 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2730) BLOC1_2 PF10046.4 gi|452210435|ref|YP_007490549.1| - 0.0029 17.6 5.6 0.15 12.2 1.2 2.2 1 1 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cep57_MT_bd PF06657.8 gi|452210435|ref|YP_007490549.1| - 0.0033 17.3 4.3 0.015 15.2 0.1 2.5 1 1 0 2 2 2 1 Centrosome microtubule-binding domain of Cep57 Tropomyosin_1 PF12718.2 gi|452210435|ref|YP_007490549.1| - 0.0039 17.0 8.1 0.0069 16.2 5.6 1.4 1 1 0 1 1 1 1 Tropomyosin like CK2S PF15011.1 gi|452210435|ref|YP_007490549.1| - 0.0052 16.5 1.0 0.0079 16.0 0.7 1.4 1 1 0 1 1 1 1 Casein Kinase 2 substrate Cluap1 PF10234.4 gi|452210435|ref|YP_007490549.1| - 0.007 15.6 7.9 0.0088 15.2 5.5 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 DUF1664 PF07889.7 gi|452210435|ref|YP_007490549.1| - 0.0075 16.0 6.0 0.54 10.0 4.2 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) FlaC_arch PF05377.6 gi|452210435|ref|YP_007490549.1| - 0.012 15.5 12.7 0.9 9.4 4.0 3.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Herpes_UL6 PF01763.11 gi|452210435|ref|YP_007490549.1| - 0.012 13.7 3.7 0.014 13.5 2.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like CAMP_factor PF07373.6 gi|452210435|ref|YP_007490549.1| - 0.016 14.6 1.1 0.018 14.5 0.8 1.1 1 0 0 1 1 1 0 CAMP factor (Cfa) bZIP_1 PF00170.16 gi|452210435|ref|YP_007490549.1| - 0.025 14.5 9.9 0.75 9.7 0.2 2.8 2 1 1 3 3 3 0 bZIP transcription factor Laminin_II PF06009.7 gi|452210435|ref|YP_007490549.1| - 0.026 14.2 6.5 3.5 7.3 0.1 2.8 1 1 0 2 2 2 0 Laminin Domain II NPV_P10 PF05531.7 gi|452210435|ref|YP_007490549.1| - 0.032 14.4 5.8 0.62 10.3 3.0 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Snapin_Pallidin PF14712.1 gi|452210435|ref|YP_007490549.1| - 0.033 14.5 5.5 0.65 10.3 1.3 2.3 1 1 1 2 2 2 0 Snapin/Pallidin Spc24 PF08286.6 gi|452210435|ref|YP_007490549.1| - 0.035 13.7 11.1 1.6 8.4 4.1 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF904 PF06005.7 gi|452210435|ref|YP_007490549.1| - 0.038 14.2 10.4 0.74 10.1 0.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF904) Reo_sigmaC PF04582.7 gi|452210435|ref|YP_007490549.1| - 0.039 13.1 3.3 0.059 12.5 2.3 1.2 1 0 0 1 1 1 0 Reovirus sigma C capsid protein TBPIP PF07106.8 gi|452210435|ref|YP_007490549.1| - 0.041 13.4 11.5 0.54 9.7 0.5 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PspA_IM30 PF04012.7 gi|452210435|ref|YP_007490549.1| - 0.043 13.1 1.0 0.21 10.8 0.7 1.9 1 1 0 1 1 1 0 PspA/IM30 family CP12 PF02672.10 gi|452210435|ref|YP_007490549.1| - 0.051 14.0 0.2 1.3 9.5 0.1 2.3 1 1 1 2 2 2 0 CP12 domain Atg14 PF10186.4 gi|452210435|ref|YP_007490549.1| - 0.051 12.5 6.2 0.15 10.9 4.2 1.8 1 1 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Rab5-bind PF09311.6 gi|452210435|ref|YP_007490549.1| - 0.053 13.4 3.1 0.28 11.0 0.0 2.2 1 1 0 2 2 2 0 Rabaptin-like protein DUF972 PF06156.8 gi|452210435|ref|YP_007490549.1| - 0.059 13.7 7.8 3.3 8.0 3.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF972) WASH_WAHD PF11945.3 gi|452210435|ref|YP_007490549.1| - 0.065 12.5 0.9 0.095 11.9 0.6 1.2 1 0 0 1 1 1 0 WAHD domain of WASH complex Med4 PF10018.4 gi|452210435|ref|YP_007490549.1| - 0.066 12.6 7.5 1.1 8.6 1.1 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Vps51 PF08700.6 gi|452210435|ref|YP_007490549.1| - 0.069 12.9 5.2 0.54 10.1 0.5 2.7 1 1 0 2 2 2 0 Vps51/Vps67 Rho_Binding PF08912.6 gi|452210435|ref|YP_007490549.1| - 0.074 13.3 0.6 0.074 13.3 0.4 3.0 1 1 1 2 2 2 0 Rho Binding DUF4140 PF13600.1 gi|452210435|ref|YP_007490549.1| - 0.078 13.4 4.0 2.6 8.5 0.1 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) AATF-Che1 PF13339.1 gi|452210435|ref|YP_007490549.1| - 0.079 13.1 3.7 0.65 10.1 2.5 2.2 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor DUF1825 PF08855.5 gi|452210435|ref|YP_007490549.1| - 0.082 12.9 2.3 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) ADIP PF11559.3 gi|452210435|ref|YP_007490549.1| - 0.086 12.7 8.2 0.068 13.0 0.9 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding AAA_13 PF13166.1 gi|452210435|ref|YP_007490549.1| - 0.089 11.2 9.1 0.26 9.7 6.3 1.6 1 1 0 1 1 1 0 AAA domain DUF948 PF06103.6 gi|452210435|ref|YP_007490549.1| - 0.091 12.6 3.5 2.2 8.2 0.1 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Ax_dynein_light PF10211.4 gi|452210435|ref|YP_007490549.1| - 0.093 12.5 9.1 0.2 11.4 1.0 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain DUF2968 PF11180.3 gi|452210435|ref|YP_007490549.1| - 0.1 12.0 0.7 1.5 8.1 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Cob_adeno_trans PF01923.13 gi|452210435|ref|YP_007490549.1| - 0.1 12.3 1.2 0.15 11.8 0.6 1.4 1 1 0 1 1 1 0 Cobalamin adenosyltransferase WXG100 PF06013.7 gi|452210435|ref|YP_007490549.1| - 0.12 12.4 0.3 9.5 6.3 0.2 2.6 1 1 0 2 2 2 0 Proteins of 100 residues with WXG DUF4108 PF13390.1 gi|452210435|ref|YP_007490549.1| - 0.12 12.0 2.9 0.18 11.5 1.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4108) DUF1843 PF08898.5 gi|452210435|ref|YP_007490549.1| - 0.12 12.4 0.6 0.83 9.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) Sec34 PF04136.10 gi|452210435|ref|YP_007490549.1| - 0.12 12.0 4.2 0.95 9.1 0.6 2.3 1 1 1 2 2 2 0 Sec34-like family CENP-F_leu_zip PF10473.4 gi|452210435|ref|YP_007490549.1| - 0.15 11.9 11.4 0.95 9.3 0.4 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF869 PF05911.6 gi|452210435|ref|YP_007490549.1| - 0.15 10.2 9.6 0.16 10.1 6.6 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF869) FliD_N PF02465.13 gi|452210435|ref|YP_007490549.1| - 0.15 12.4 3.2 4.7 7.6 0.0 2.3 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF3829 PF12889.2 gi|452210435|ref|YP_007490549.1| - 0.15 11.1 5.7 0.35 10.0 3.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) MitMem_reg PF13012.1 gi|452210435|ref|YP_007490549.1| - 0.16 12.0 3.9 0.19 11.8 2.7 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function COG2 PF06148.6 gi|452210435|ref|YP_007490549.1| - 0.16 11.8 5.1 2 8.3 2.2 2.5 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Prefoldin PF02996.12 gi|452210435|ref|YP_007490549.1| - 0.16 11.5 8.1 49 3.6 5.6 2.9 1 1 0 1 1 1 0 Prefoldin subunit ACCA PF03255.9 gi|452210435|ref|YP_007490549.1| - 0.19 11.2 3.2 1.5 8.3 0.2 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF489 PF04356.7 gi|452210435|ref|YP_007490549.1| - 0.2 11.1 1.6 9 5.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF489) Zein-binding PF04576.10 gi|452210435|ref|YP_007490549.1| - 0.25 11.4 2.8 0.77 9.9 1.1 2.2 1 1 1 2 2 2 0 Zein-binding CorA PF01544.13 gi|452210435|ref|YP_007490549.1| - 0.28 10.1 8.1 1.3 8.0 1.0 2.4 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein FlxA PF14282.1 gi|452210435|ref|YP_007490549.1| - 0.3 11.0 8.1 0.14 12.1 1.5 2.4 1 1 1 2 2 2 0 FlxA-like protein Orthopox_A5L PF06193.6 gi|452210435|ref|YP_007490549.1| - 0.45 10.4 7.4 0.27 11.1 0.8 2.1 1 1 1 2 2 2 0 Orthopoxvirus A5L protein-like Syntaxin_2 PF14523.1 gi|452210435|ref|YP_007490549.1| - 0.46 10.5 6.6 6.6 6.8 2.8 2.4 1 1 1 2 2 2 0 Syntaxin-like protein Bacillus_HBL PF05791.6 gi|452210435|ref|YP_007490549.1| - 0.47 9.8 8.2 3.1 7.1 0.9 2.1 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) DUF1759 PF03564.10 gi|452210435|ref|YP_007490549.1| - 0.5 10.1 4.2 0.79 9.5 2.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) DASH_Dam1 PF08653.5 gi|452210435|ref|YP_007490549.1| - 0.66 9.7 3.5 18 5.2 1.0 3.3 2 2 0 2 2 2 0 DASH complex subunit Dam1 DNA_topoisoIV PF00521.15 gi|452210435|ref|YP_007490549.1| - 0.73 8.6 8.0 0.84 8.4 5.5 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DASH_Dad3 PF08656.5 gi|452210435|ref|YP_007490549.1| - 0.78 9.4 8.2 14 5.5 3.5 2.8 1 1 1 2 2 2 0 DASH complex subunit Dad3 DUF4200 PF13863.1 gi|452210435|ref|YP_007490549.1| - 0.79 9.6 9.2 1.1 9.2 4.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DUF1319 PF07028.6 gi|452210435|ref|YP_007490549.1| - 0.81 9.8 6.2 0.94 9.6 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) Syntaxin-6_N PF09177.6 gi|452210435|ref|YP_007490549.1| - 0.91 9.9 5.6 1.2 9.5 0.6 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HalX PF08663.5 gi|452210435|ref|YP_007490549.1| - 0.99 9.4 7.4 4.6 7.2 0.1 3.0 1 1 2 3 3 3 0 HalX domain GrpE PF01025.14 gi|452210435|ref|YP_007490549.1| - 1.1 8.8 8.6 6.1 6.3 3.0 2.1 1 1 1 2 2 2 0 GrpE Occludin_ELL PF07303.8 gi|452210435|ref|YP_007490549.1| - 1.2 9.9 4.3 3.8 8.3 1.1 2.1 1 1 1 2 2 2 0 Occludin homology domain ATG16 PF08614.6 gi|452210435|ref|YP_007490549.1| - 1.2 8.8 11.5 8.2 6.2 5.2 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIVA PF05103.8 gi|452210435|ref|YP_007490549.1| - 1.2 9.1 9.4 1.3 9.0 0.1 2.9 1 1 2 3 3 3 0 DivIVA protein DUF2762 PF10960.3 gi|452210435|ref|YP_007490549.1| - 1.4 8.6 4.7 1.1 8.9 0.6 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2762) XhlA PF10779.4 gi|452210435|ref|YP_007490549.1| - 1.7 8.6 10.9 1.2 9.1 2.9 2.5 1 1 1 2 2 2 0 Haemolysin XhlA UPF0184 PF03670.8 gi|452210435|ref|YP_007490549.1| - 1.7 8.8 7.7 1.6 8.9 2.1 2.6 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0184) APG6 PF04111.7 gi|452210435|ref|YP_007490549.1| - 2 7.3 9.4 9.1 5.2 5.2 1.9 1 1 0 1 1 1 0 Autophagy protein Apg6 DivIC PF04977.10 gi|452210435|ref|YP_007490549.1| - 2.1 7.8 7.8 7.8 6.0 0.2 2.7 1 1 2 3 3 3 0 Septum formation initiator DUF342 PF03961.8 gi|452210435|ref|YP_007490549.1| - 2.2 6.5 10.1 12 4.1 7.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF342) DUF4404 PF14357.1 gi|452210435|ref|YP_007490549.1| - 2.4 8.6 8.5 21 5.6 1.3 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) Cep57_CLD_2 PF14197.1 gi|452210435|ref|YP_007490549.1| - 3.6 7.6 8.4 4.2 7.3 0.4 2.6 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Rootletin PF15035.1 gi|452210435|ref|YP_007490549.1| - 3.7 7.4 8.4 19 5.1 5.8 1.9 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion HR1 PF02185.11 gi|452210435|ref|YP_007490549.1| - 6 6.6 10.0 2 8.2 0.8 2.9 2 1 0 2 2 2 0 Hr1 repeat Cortex-I_coil PF09304.5 gi|452210435|ref|YP_007490549.1| - 6.1 6.9 12.6 28 4.8 2.5 2.2 1 1 1 2 2 2 0 Cortexillin I, coiled coil EMP24_GP25L PF01105.19 gi|452210435|ref|YP_007490549.1| - 7.2 6.2 7.3 4.9 6.8 1.5 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD DUF2683 PF10884.3 gi|452210436|ref|YP_007490550.1| - 1.4e-36 124.2 4.1 1.6e-36 124.0 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) NurA PF09376.5 gi|452210437|ref|YP_007490551.1| - 7.3e-32 110.7 0.0 1e-31 110.3 0.0 1.2 1 0 0 1 1 1 1 NurA domain AAA_10 PF12846.2 gi|452210438|ref|YP_007490552.1| - 2.8e-25 89.4 0.0 8.1e-24 84.5 0.0 2.1 1 1 0 1 1 1 1 AAA-like domain DUF87 PF01935.12 gi|452210438|ref|YP_007490552.1| - 3.8e-10 39.9 0.0 2.1e-09 37.5 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function DUF87 DUF853 PF05872.7 gi|452210438|ref|YP_007490552.1| - 8.8e-07 27.6 0.0 0.0017 16.8 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_22 PF13401.1 gi|452210438|ref|YP_007490552.1| - 4.3e-05 23.6 0.0 0.0047 17.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|452210438|ref|YP_007490552.1| - 7.9e-05 22.2 0.0 0.045 13.2 0.0 2.3 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA PF00004.24 gi|452210438|ref|YP_007490552.1| - 0.00077 19.6 1.0 0.58 10.3 0.0 2.7 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DEAD PF00270.24 gi|452210438|ref|YP_007490552.1| - 0.0014 18.1 0.0 0.59 9.6 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase TrwB_AAD_bind PF10412.4 gi|452210438|ref|YP_007490552.1| - 0.0021 16.7 0.0 0.0035 16.0 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.10 gi|452210438|ref|YP_007490552.1| - 0.0037 17.1 0.0 0.077 12.8 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit RNA_helicase PF00910.17 gi|452210438|ref|YP_007490552.1| - 0.0086 16.2 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HAS-barrel PF09378.5 gi|452210438|ref|YP_007490552.1| - 0.026 14.3 0.0 0.079 12.8 0.0 1.8 1 0 0 1 1 1 0 HAS barrel domain AAA_16 PF13191.1 gi|452210438|ref|YP_007490552.1| - 0.036 14.0 0.0 0.9 9.4 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain T2SE PF00437.15 gi|452210438|ref|YP_007490552.1| - 0.049 12.5 0.0 0.091 11.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Zot PF05707.7 gi|452210438|ref|YP_007490552.1| - 0.059 12.8 0.0 0.17 11.3 0.0 1.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_33 PF13671.1 gi|452210438|ref|YP_007490552.1| - 0.073 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|452210438|ref|YP_007490552.1| - 0.091 11.7 0.0 0.59 9.0 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) SopD PF11047.3 gi|452210438|ref|YP_007490552.1| - 0.1 11.5 0.0 0.37 9.7 0.0 1.8 2 0 0 2 2 2 0 Salmonella outer protein D AAA_17 PF13207.1 gi|452210438|ref|YP_007490552.1| - 0.11 13.3 0.0 0.37 11.6 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.21 gi|452210438|ref|YP_007490552.1| - 0.14 11.5 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|452210438|ref|YP_007490552.1| - 0.2 11.0 0.0 0.37 10.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Flavoprotein PF02441.14 gi|452210439|ref|YP_007490553.1| - 3.3e-31 107.6 0.1 4.4e-31 107.2 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein HD PF01966.17 gi|452210441|ref|YP_007490555.1| - 1.1e-13 51.2 5.2 1.3e-12 47.8 0.6 2.9 2 1 1 3 3 3 2 HD domain UPF0052 PF01933.13 gi|452210442|ref|YP_007490556.1| - 6.3e-58 196.4 0.0 9e-58 195.9 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Pribosyltran PF00156.22 gi|452210444|ref|YP_007490558.1| - 4.9e-21 74.7 0.5 6.8e-21 74.2 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|452210444|ref|YP_007490558.1| - 9.1e-05 21.7 0.0 0.00014 21.1 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|452210444|ref|YP_007490558.1| - 0.00091 18.5 0.1 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Diphthamide_syn PF01866.12 gi|452210445|ref|YP_007490559.1| - 3.1e-105 351.8 0.0 3.5e-105 351.6 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.9 gi|452210446|ref|YP_007490560.1| - 2.6e-14 52.9 0.0 3.2e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|452210446|ref|YP_007490560.1| - 7.1e-14 51.6 0.1 9.2e-14 51.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|452210446|ref|YP_007490560.1| - 9.3e-12 45.0 0.0 1.2e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210446|ref|YP_007490560.1| - 1.7e-11 43.9 0.0 2.1e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210446|ref|YP_007490560.1| - 7.8e-11 42.5 0.0 1.1e-10 42.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452210446|ref|YP_007490560.1| - 6.8e-09 35.5 0.0 7.6e-09 35.3 0.0 1.1 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|452210446|ref|YP_007490560.1| - 1.5e-07 31.7 0.0 2.6e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210446|ref|YP_007490560.1| - 6.4e-06 26.5 0.0 1.3e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|452210446|ref|YP_007490560.1| - 0.00014 21.5 0.0 0.00015 21.3 0.0 1.2 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_15 PF09445.5 gi|452210446|ref|YP_007490560.1| - 0.0023 17.5 0.0 0.0032 17.0 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.1 gi|452210446|ref|YP_007490560.1| - 0.0023 17.6 0.0 0.0036 17.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|452210446|ref|YP_007490560.1| - 0.0032 16.8 0.0 0.0042 16.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_32 PF13679.1 gi|452210446|ref|YP_007490560.1| - 0.0033 17.1 0.0 0.004 16.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FmrO PF07091.6 gi|452210446|ref|YP_007490560.1| - 0.0057 15.6 0.0 0.0084 15.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Ubie_methyltran PF01209.13 gi|452210446|ref|YP_007490560.1| - 0.0072 15.4 0.0 0.0095 15.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.14 gi|452210446|ref|YP_007490560.1| - 0.01 15.3 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|452210446|ref|YP_007490560.1| - 0.02 15.3 0.1 0.083 13.3 0.1 2.0 2 1 0 2 2 1 0 Methyltransferase domain DUF43 PF01861.11 gi|452210446|ref|YP_007490560.1| - 0.056 12.4 0.0 0.087 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF43 ECR1_N PF14382.1 gi|452210447|ref|YP_007490561.1| - 4.8e-09 35.3 0.8 8.8e-09 34.5 0.1 1.8 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.4 gi|452210447|ref|YP_007490561.1| - 3.3e-05 23.7 1.4 3.3e-05 23.7 1.0 2.8 2 1 1 3 3 3 1 Exosome component EXOSC1/CSL4 S1 PF00575.18 gi|452210447|ref|YP_007490561.1| - 0.011 15.7 7.6 0.52 10.4 0.6 2.9 3 0 0 3 3 3 0 S1 RNA binding domain HypA PF01155.14 gi|452210447|ref|YP_007490561.1| - 0.014 15.0 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family ALS_ss_C PF10369.4 gi|452210447|ref|YP_007490561.1| - 0.016 14.9 2.3 2 8.2 0.1 3.1 1 1 2 3 3 3 0 Small subunit of acetolactate synthase zf-C3HC4_3 PF13920.1 gi|452210447|ref|YP_007490561.1| - 0.17 11.5 1.8 0.27 10.9 1.2 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_pol_L_2 PF13656.1 gi|452210448|ref|YP_007490562.1| - 3.2e-20 71.3 0.1 3.8e-20 71.1 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.19 gi|452210448|ref|YP_007490562.1| - 0.00083 18.4 0.0 0.002 17.1 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SLA_LP_auto_ag PF05889.8 gi|452210449|ref|YP_007490563.1| - 1.4e-56 191.6 0.0 2.6e-56 190.7 0.0 1.4 1 1 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Aminotran_5 PF00266.14 gi|452210449|ref|YP_007490563.1| - 9.4e-16 57.5 0.0 1.3e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|452210449|ref|YP_007490563.1| - 5.9e-11 41.9 0.0 7.9e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Pyridoxal_deC PF00282.14 gi|452210449|ref|YP_007490563.1| - 0.001 17.5 0.0 0.0016 16.9 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.16 gi|452210449|ref|YP_007490563.1| - 0.0018 17.5 0.0 0.0024 17.0 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.15 gi|452210449|ref|YP_007490563.1| - 0.0037 15.8 0.0 0.013 14.1 0.0 1.6 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DegT_DnrJ_EryC1 PF01041.12 gi|452210449|ref|YP_007490563.1| - 0.012 14.6 0.0 0.025 13.6 0.0 1.4 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_20 PF12840.2 gi|452210450|ref|YP_007490564.1| - 2.5e-06 27.1 0.0 3.7e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|452210450|ref|YP_007490564.1| - 2.6e-05 24.1 0.0 3.8e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|452210450|ref|YP_007490564.1| - 0.00066 19.3 0.0 0.00096 18.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|452210450|ref|YP_007490564.1| - 0.0015 18.2 0.1 0.0027 17.5 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.14 gi|452210450|ref|YP_007490564.1| - 0.011 15.4 0.0 0.032 13.9 0.0 1.9 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|452210450|ref|YP_007490564.1| - 0.02 14.2 0.1 0.051 12.9 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding tRNA_bind_2 PF13725.1 gi|452210450|ref|YP_007490564.1| - 0.046 13.8 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Possible tRNA binding domain VASP_tetra PF08776.6 gi|452210450|ref|YP_007490564.1| - 0.17 11.1 1.3 0.45 9.8 0.9 1.7 1 0 0 1 1 1 0 VASP tetramerisation domain DUF2148 PF09918.4 gi|452210451|ref|YP_007490565.1| - 6.4e-36 121.8 1.3 6.4e-36 121.8 0.9 1.9 2 0 0 2 2 2 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.8 gi|452210451|ref|YP_007490565.1| - 0.00013 21.4 0.8 0.00028 20.4 0.6 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster zf-UDP PF14569.1 gi|452210451|ref|YP_007490565.1| - 0.054 13.2 0.1 0.093 12.4 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger Orn_Arg_deC_N PF02784.11 gi|452210452|ref|YP_007490566.1| - 7e-37 126.9 0.0 8.7e-37 126.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|452210452|ref|YP_007490566.1| - 1.7e-16 59.9 0.0 2.5e-16 59.4 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Sulfatase PF00884.18 gi|452210456|ref|YP_007490570.1| - 1.9e-63 214.5 0.0 2.7e-63 213.9 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.17 gi|452210456|ref|YP_007490570.1| - 4.6e-06 26.2 0.1 0.0063 15.8 0.0 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase_C PF14707.1 gi|452210456|ref|YP_007490570.1| - 8.4e-06 26.1 0.0 1.7e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Radical_SAM PF04055.16 gi|452210457|ref|YP_007490571.1| - 7.9e-15 55.4 0.0 1.3e-14 54.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SEC-C PF02810.10 gi|452210457|ref|YP_007490571.1| - 6e-11 41.6 6.0 1.3e-10 40.5 4.2 1.6 1 0 0 1 1 1 1 SEC-C motif SPASM PF13186.1 gi|452210457|ref|YP_007490571.1| - 6.3e-08 32.8 0.1 1.9e-07 31.3 0.1 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|452210457|ref|YP_007490571.1| - 2.3e-07 30.9 0.0 4.1e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452210457|ref|YP_007490571.1| - 6.7e-05 22.9 0.0 0.00012 22.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DNA_pol_B_thumb PF14791.1 gi|452210459|ref|YP_007490573.1| - 1.4e-26 91.9 0.1 4.5e-26 90.3 0.1 2.0 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_8 PF14716.1 gi|452210459|ref|YP_007490573.1| - 1.1e-17 63.9 6.1 1.4e-17 63.5 0.4 3.5 3 1 1 4 4 4 1 Helix-hairpin-helix domain PHP PF02811.14 gi|452210459|ref|YP_007490573.1| - 7e-15 55.2 0.1 3.5e-14 52.9 0.1 2.1 1 1 1 2 2 2 1 PHP domain HHH_5 PF14520.1 gi|452210459|ref|YP_007490573.1| - 2.6e-09 37.0 5.1 1.2e-05 25.3 0.4 3.5 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_3 PF12836.2 gi|452210459|ref|YP_007490573.1| - 0.00089 19.1 0.9 1.7 8.6 0.0 3.3 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|452210459|ref|YP_007490573.1| - 0.0013 18.5 3.3 0.014 15.3 0.0 3.2 4 0 0 4 4 4 1 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.1 gi|452210459|ref|YP_007490573.1| - 0.0015 18.5 0.0 0.0042 17.1 0.0 1.8 1 0 0 1 1 1 1 DNA polymerase beta palm HHH PF00633.18 gi|452210459|ref|YP_007490573.1| - 0.0034 16.9 1.5 0.18 11.6 0.1 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_ligase_A_M PF01068.16 gi|452210460|ref|YP_007490574.1| - 5e-51 172.9 2.2 8.4e-51 172.2 1.5 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|452210460|ref|YP_007490574.1| - 3.8e-49 166.8 1.3 1.9e-48 164.5 0.3 2.4 3 0 0 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|452210460|ref|YP_007490574.1| - 2.6e-23 82.2 0.0 8.6e-23 80.5 0.0 1.9 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.1 gi|452210460|ref|YP_007490574.1| - 5.9e-06 25.8 0.1 0.0023 17.5 0.0 2.5 2 0 0 2 2 2 2 DNA ligase OB-like domain 4HBT PF03061.17 gi|452210461|ref|YP_007490575.1| - 8.7e-12 44.9 0.0 1.3e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.1 gi|452210461|ref|YP_007490575.1| - 3.8e-05 23.6 0.2 7e-05 22.8 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) Pep_deformylase PF01327.16 gi|452210461|ref|YP_007490575.1| - 0.0039 16.6 0.0 0.0049 16.2 0.0 1.1 1 0 0 1 1 1 1 Polypeptide deformylase 4HBT_3 PF13622.1 gi|452210461|ref|YP_007490575.1| - 0.028 14.1 0.0 0.033 13.9 0.0 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily FCH PF00611.18 gi|452210461|ref|YP_007490575.1| - 0.033 14.3 0.0 0.054 13.6 0.0 1.4 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain CP2 PF04516.10 gi|452210462|ref|YP_007490576.1| - 0.014 14.5 0.0 0.015 14.3 0.0 1.0 1 0 0 1 1 1 0 CP2 transcription factor DUF4430 PF14478.1 gi|452210464|ref|YP_007490578.1| - 3.5e-08 33.3 1.3 3.5e-08 33.3 0.9 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4430) Ion_trans_2 PF07885.11 gi|452210465|ref|YP_007490579.1| - 2.4e-06 27.1 8.2 2.4e-06 27.1 5.7 1.8 2 0 0 2 2 2 1 Ion channel Lig_chan PF00060.21 gi|452210465|ref|YP_007490579.1| - 7.2e-06 25.7 0.8 1.3e-05 24.9 0.5 1.6 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.26 gi|452210465|ref|YP_007490579.1| - 0.014 14.6 24.3 0.018 14.2 13.1 2.9 2 1 0 2 2 2 0 Ion transport protein HDOD PF08668.7 gi|452210465|ref|YP_007490579.1| - 0.1 11.8 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 HDOD domain ASFV_J13L PF05568.6 gi|452210465|ref|YP_007490579.1| - 0.12 11.9 0.7 0.18 11.3 0.5 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein 7tm_7 PF08395.7 gi|452210465|ref|YP_007490579.1| - 0.13 11.2 8.4 0.2 10.6 0.7 2.7 2 1 0 2 2 2 0 7tm Chemosensory receptor DivIC PF04977.10 gi|452210465|ref|YP_007490579.1| - 0.53 9.8 0.0 0.53 9.8 0.0 2.3 3 0 0 3 3 3 0 Septum formation initiator DUF1270 PF06900.6 gi|452210466|ref|YP_007490580.1| - 0.13 12.3 0.6 0.21 11.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) Ferric_reduct PF01794.14 gi|452210467|ref|YP_007490581.1| - 1.2e-05 25.3 11.9 0.00027 21.0 8.8 2.3 1 1 1 2 2 2 1 Ferric reductase like transmembrane component DUF1516 PF07457.6 gi|452210467|ref|YP_007490581.1| - 0.28 11.2 14.4 1.1 9.4 1.7 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1516) DUF4191 PF13829.1 gi|452210467|ref|YP_007490581.1| - 0.29 10.2 2.5 1.4 8.0 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF4131 PF13567.1 gi|452210467|ref|YP_007490581.1| - 0.82 9.0 4.4 8.7 5.7 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF3397 PF11877.3 gi|452210467|ref|YP_007490581.1| - 1 9.4 12.7 0.12 12.3 1.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3397) DUF1430 PF07242.6 gi|452210467|ref|YP_007490581.1| - 2.5 8.2 15.0 1.8 8.6 0.0 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF1430) DUF4389 PF14333.1 gi|452210467|ref|YP_007490581.1| - 3.1 7.5 5.7 0.4 10.4 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) O-antigen_lig PF13425.1 gi|452210467|ref|YP_007490581.1| - 3.3 7.7 18.2 0.27 11.2 3.3 2.8 1 1 0 2 2 2 0 O-antigen ligase like membrane protein DUF2116 PF09889.4 gi|452210467|ref|YP_007490581.1| - 9 6.1 7.8 6.2 6.6 0.1 3.3 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Acetyltransf_4 PF13420.1 gi|452210468|ref|YP_007490582.1| - 1.6e-20 73.6 0.0 1.9e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452210468|ref|YP_007490582.1| - 6.1e-12 45.9 0.0 7.4e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452210468|ref|YP_007490582.1| - 2.3e-10 40.3 0.0 3.5e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452210468|ref|YP_007490582.1| - 2e-08 34.2 0.0 3.3e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452210468|ref|YP_007490582.1| - 2.2e-05 24.3 0.0 2.8e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452210468|ref|YP_007490582.1| - 8.7e-05 22.6 0.0 9.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452210468|ref|YP_007490582.1| - 0.027 14.2 0.0 0.037 13.7 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.1 gi|452210468|ref|YP_007490582.1| - 0.078 12.8 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MarR PF01047.17 gi|452210469|ref|YP_007490583.1| - 1.9e-12 46.7 0.0 3.5e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|452210469|ref|YP_007490583.1| - 2e-08 33.7 0.0 3.4e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|452210469|ref|YP_007490583.1| - 4.2e-08 33.1 0.0 7.5e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|452210469|ref|YP_007490583.1| - 1.8e-07 31.3 0.0 3.3e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|452210469|ref|YP_007490583.1| - 1.4e-06 28.1 0.6 2.6e-06 27.2 0.1 1.6 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.1 gi|452210469|ref|YP_007490583.1| - 6.8e-06 25.3 0.0 1.4e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|452210469|ref|YP_007490583.1| - 3.1e-05 23.5 0.2 0.00013 21.6 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FeoC PF09012.5 gi|452210469|ref|YP_007490583.1| - 0.0023 17.5 0.2 0.0051 16.4 0.0 1.6 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_20 PF12840.2 gi|452210469|ref|YP_007490583.1| - 0.0024 17.6 0.0 0.0085 15.8 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210469|ref|YP_007490583.1| - 0.0024 17.4 0.0 0.0044 16.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.12 gi|452210469|ref|YP_007490583.1| - 0.0038 16.8 0.0 0.0057 16.2 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Rrf2 PF02082.15 gi|452210469|ref|YP_007490583.1| - 0.0066 16.5 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.5 gi|452210469|ref|YP_007490583.1| - 0.012 15.1 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain PadR PF03551.9 gi|452210469|ref|YP_007490583.1| - 0.019 14.7 0.0 0.046 13.4 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_36 PF13730.1 gi|452210469|ref|YP_007490583.1| - 0.023 14.8 0.0 0.05 13.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|452210469|ref|YP_007490583.1| - 0.026 14.3 0.0 0.05 13.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_1 PF00126.22 gi|452210469|ref|YP_007490583.1| - 0.029 14.1 0.0 0.063 13.0 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family CRS1_YhbY PF01985.16 gi|452210469|ref|YP_007490583.1| - 0.032 14.2 0.1 0.063 13.2 0.1 1.5 1 0 0 1 1 1 0 CRS1 / YhbY (CRM) domain HTH_45 PF14947.1 gi|452210469|ref|YP_007490583.1| - 0.034 13.9 0.1 0.07 12.9 0.0 1.6 2 0 0 2 2 1 0 Winged helix-turn-helix HTH_11 PF08279.7 gi|452210469|ref|YP_007490583.1| - 0.05 13.2 0.1 0.11 12.1 0.0 1.6 2 0 0 2 2 1 0 HTH domain DUF2250 PF10007.4 gi|452210469|ref|YP_007490583.1| - 0.064 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) B-block_TFIIIC PF04182.7 gi|452210469|ref|YP_007490583.1| - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_10 PF04967.7 gi|452210469|ref|YP_007490583.1| - 0.12 11.9 0.3 0.4 10.2 0.1 1.9 2 0 0 2 2 2 0 HTH DNA binding domain DUF4423 PF14394.1 gi|452210469|ref|YP_007490583.1| - 0.13 11.7 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Rhodanese PF00581.15 gi|452210470|ref|YP_007490584.1| - 1e-22 80.6 0.0 1.2e-22 80.3 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2238 PF09997.4 gi|452210472|ref|YP_007490586.1| - 0.00032 20.0 4.7 0.00084 18.7 3.2 1.8 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) DUF2637 PF10935.3 gi|452210472|ref|YP_007490586.1| - 0.31 10.9 2.4 0.41 10.5 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) DUF1129 PF06570.6 gi|452210472|ref|YP_007490586.1| - 5.5 6.2 7.2 7.3 5.8 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) BRI3BP PF14965.1 gi|452210472|ref|YP_007490586.1| - 7.2 5.9 10.0 29 3.9 4.7 2.2 1 1 1 2 2 2 0 Negative regulator of p53/TP53 DUF2769 PF10967.3 gi|452210474|ref|YP_007490588.1| - 3.6e-08 33.5 12.5 1.3e-05 25.4 3.0 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF2769) Whib PF02467.11 gi|452210474|ref|YP_007490588.1| - 0.019 15.2 6.1 0.036 14.3 0.3 2.4 2 0 0 2 2 2 0 Transcription factor WhiB Isochorismatase PF00857.15 gi|452210475|ref|YP_007490589.1| - 4e-36 124.5 0.0 4.5e-36 124.4 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family ICMT PF04140.9 gi|452210477|ref|YP_007490591.1| - 3.5e-20 71.9 0.2 7.7e-20 70.9 0.1 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.8 gi|452210477|ref|YP_007490591.1| - 1.2e-14 54.3 0.2 1.2e-14 54.3 0.1 1.7 2 0 0 2 2 2 1 Phospholipid methyltransferase DUF1295 PF06966.7 gi|452210477|ref|YP_007490591.1| - 0.00055 19.2 0.5 0.00084 18.7 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Na_H_Exchanger PF00999.16 gi|452210479|ref|YP_007490593.1| - 1.1e-76 257.8 49.8 1.6e-76 257.3 34.5 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|452210479|ref|YP_007490593.1| - 5.3e-21 74.7 0.2 8.9e-21 74.0 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|452210479|ref|YP_007490593.1| - 6.4e-11 41.6 0.0 2.1e-10 40.0 0.0 2.0 1 0 0 1 1 1 1 TrkA-C domain Maf PF02545.9 gi|452210480|ref|YP_007490594.1| - 7.3e-51 172.0 0.0 8.8e-51 171.8 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein tRNA-synt_1e PF01406.14 gi|452210481|ref|YP_007490595.1| - 7.1e-105 350.4 0.0 9.8e-105 349.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|452210481|ref|YP_007490595.1| - 1.7e-17 63.1 0.1 4.8e-08 32.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.6 gi|452210481|ref|YP_007490595.1| - 7.4e-15 54.9 0.0 1.6e-14 53.8 0.0 1.5 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.13 gi|452210481|ref|YP_007490595.1| - 5.6e-12 45.0 0.0 6.4e-06 25.0 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.17 gi|452210481|ref|YP_007490595.1| - 1.4e-09 36.5 0.1 1.1e-06 26.9 0.0 2.5 3 0 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1d PF00750.14 gi|452210481|ref|YP_007490595.1| - 0.0024 16.7 0.0 0.55 8.9 0.0 2.9 2 1 1 3 3 3 2 tRNA synthetases class I (R) tRNA-synt_1c PF00749.16 gi|452210481|ref|YP_007490595.1| - 0.012 14.2 0.0 0.034 12.7 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain DUF768 PF05589.6 gi|452210481|ref|YP_007490595.1| - 0.071 13.0 0.6 0.61 10.0 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF768) Lon_C PF05362.8 gi|452210483|ref|YP_007490597.1| - 2.1e-10 40.2 3.9 4.6e-10 39.1 1.1 2.1 1 1 1 2 2 2 1 Lon protease (S16) C-terminal proteolytic domain Med4 PF10018.4 gi|452210483|ref|YP_007490597.1| - 0.0044 16.4 0.0 0.007 15.7 0.0 1.3 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 Mod_r PF07200.8 gi|452210483|ref|YP_007490597.1| - 0.0091 15.9 0.6 0.014 15.3 0.4 1.2 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein TBPIP PF07106.8 gi|452210483|ref|YP_007490597.1| - 0.0097 15.4 0.4 0.014 14.9 0.3 1.2 1 0 0 1 1 1 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Filament PF00038.16 gi|452210483|ref|YP_007490597.1| - 0.021 14.3 1.7 0.029 13.8 1.2 1.1 1 0 0 1 1 1 0 Intermediate filament protein ATG16 PF08614.6 gi|452210483|ref|YP_007490597.1| - 0.027 14.2 1.3 0.043 13.6 0.9 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Cluap1 PF10234.4 gi|452210483|ref|YP_007490597.1| - 0.032 13.4 0.4 0.052 12.7 0.3 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 Herpes_UL6 PF01763.11 gi|452210483|ref|YP_007490597.1| - 0.043 12.0 0.1 0.058 11.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like TSC22 PF01166.13 gi|452210483|ref|YP_007490597.1| - 0.055 13.4 4.2 0.11 12.4 2.0 2.0 1 1 1 2 2 2 0 TSC-22/dip/bun family DUF2547 PF10818.3 gi|452210483|ref|YP_007490597.1| - 0.058 14.0 0.9 0.12 13.0 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) XhlA PF10779.4 gi|452210483|ref|YP_007490597.1| - 0.068 13.0 1.1 0.15 12.0 0.7 1.5 1 0 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.10 gi|452210483|ref|YP_007490597.1| - 0.073 12.5 2.0 0.15 11.5 1.4 1.5 1 0 0 1 1 1 0 Septum formation initiator IncA PF04156.9 gi|452210483|ref|YP_007490597.1| - 0.11 12.0 7.2 0.28 10.7 5.0 1.6 1 1 0 1 1 1 0 IncA protein DUF812 PF05667.6 gi|452210483|ref|YP_007490597.1| - 0.2 10.1 2.2 0.28 9.6 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) BLOC1_2 PF10046.4 gi|452210483|ref|YP_007490597.1| - 0.29 11.2 3.7 0.18 11.9 0.9 1.8 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 bZIP_2 PF07716.10 gi|452210483|ref|YP_007490597.1| - 0.34 10.7 5.5 0.75 9.6 3.8 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Metallophos PF00149.23 gi|452210484|ref|YP_007490598.1| - 1.6e-06 27.6 0.1 2e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452210484|ref|YP_007490598.1| - 2.3e-05 24.3 0.0 3.3e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DNA_pol_E_B PF04042.11 gi|452210484|ref|YP_007490598.1| - 0.0079 15.4 0.0 0.017 14.3 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Tubulin-binding PF00418.14 gi|452210484|ref|YP_007490598.1| - 0.045 13.4 0.0 0.1 12.3 0.0 1.6 1 0 0 1 1 1 0 Tau and MAP protein, tubulin-binding repeat PocR PF10114.4 gi|452210485|ref|YP_007490599.1| - 1.2e-69 232.8 1.0 8.1e-69 230.1 0.0 2.4 3 0 0 3 3 3 1 Sensory domain found in PocR HisKA_2 PF07568.7 gi|452210485|ref|YP_007490599.1| - 2.5e-32 110.5 0.8 2.5e-32 110.5 0.6 2.1 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|452210485|ref|YP_007490599.1| - 1.3e-17 64.0 0.0 3e-17 62.8 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|452210485|ref|YP_007490599.1| - 2.7e-16 59.3 0.0 6e-16 58.2 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|452210485|ref|YP_007490599.1| - 2.1e-11 43.5 0.1 6.2e-11 42.0 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|452210485|ref|YP_007490599.1| - 1.2e-09 38.1 0.0 2.2e-09 37.3 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|452210485|ref|YP_007490599.1| - 3e-08 33.2 0.0 1.5e-07 31.0 0.0 2.3 2 0 0 2 2 2 1 PAS domain PAS_10 PF13596.1 gi|452210485|ref|YP_007490599.1| - 6.8e-06 26.3 0.0 2.1e-05 24.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.6 gi|452210485|ref|YP_007490599.1| - 4.7e-05 23.4 0.0 0.0002 21.3 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.2 gi|452210485|ref|YP_007490599.1| - 0.0001 22.2 0.0 0.0094 15.9 0.0 3.2 1 1 1 2 2 2 1 PAS fold HWE_HK PF07536.9 gi|452210485|ref|YP_007490599.1| - 0.0024 18.2 0.5 0.0077 16.6 0.3 1.9 1 1 0 1 1 1 1 HWE histidine kinase HATPase_c_3 PF13589.1 gi|452210485|ref|YP_007490599.1| - 0.017 14.7 0.0 0.038 13.6 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rho_N PF07498.7 gi|452210486|ref|YP_007490600.1| - 0.055 13.2 1.2 4 7.2 0.1 2.2 1 1 1 2 2 2 0 Rho termination factor, N-terminal domain tRNA-synt_2 PF00152.15 gi|452210487|ref|YP_007490601.1| - 4.2e-99 331.5 1.1 5.1e-99 331.2 0.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|452210487|ref|YP_007490601.1| - 3.9e-14 52.2 0.1 7.4e-14 51.3 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|452210487|ref|YP_007490601.1| - 3.3e-07 29.7 0.2 0.0025 17.0 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DEAD_assoc PF08494.6 gi|452210488|ref|YP_007490602.1| - 1.4e-42 145.5 0.0 2.4e-42 144.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|452210488|ref|YP_007490602.1| - 2.3e-32 111.8 0.0 1.9e-31 108.8 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452210488|ref|YP_007490602.1| - 4.1e-18 65.0 0.1 3.8e-16 58.7 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452210488|ref|YP_007490602.1| - 2.2e-06 27.6 0.1 6.2e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|452210488|ref|YP_007490602.1| - 0.00038 19.3 0.0 0.00075 18.3 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Rep_4 PF05797.6 gi|452210488|ref|YP_007490602.1| - 0.0043 15.8 0.0 0.0094 14.6 0.0 1.5 1 0 0 1 1 1 1 Yeast trans-acting factor (REP1/REP2) T4SS-DNA_transf PF02534.9 gi|452210488|ref|YP_007490602.1| - 0.033 12.7 0.0 0.071 11.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer UvrD-helicase PF00580.16 gi|452210488|ref|YP_007490602.1| - 0.037 13.3 0.0 0.18 11.0 0.0 2.0 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain Zn-ribbon_8 PF09723.5 gi|452210488|ref|YP_007490602.1| - 0.054 13.4 0.9 0.11 12.4 0.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain AAA_22 PF13401.1 gi|452210488|ref|YP_007490602.1| - 0.11 12.6 0.4 0.87 9.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain Ribosomal_S13 PF00416.17 gi|452210488|ref|YP_007490602.1| - 0.23 11.9 2.8 2.8 8.4 0.0 3.3 2 1 1 3 3 3 0 Ribosomal protein S13/S18 DUF1232 PF06803.7 gi|452210489|ref|YP_007490603.1| - 3.6e-14 51.9 6.8 5e-14 51.4 4.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Filamin PF00630.14 gi|452210490|ref|YP_007490604.1| - 0.00022 21.7 0.0 0.00031 21.2 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat GldH_lipo PF14109.1 gi|452210490|ref|YP_007490604.1| - 0.0062 16.7 0.0 0.49 10.6 0.0 2.1 1 1 1 2 2 2 2 GldH lipoprotein PPC PF04151.10 gi|452210490|ref|YP_007490604.1| - 0.029 15.3 0.1 0.076 13.9 0.0 1.8 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain Mfa2 PF08842.5 gi|452210490|ref|YP_007490604.1| - 0.043 13.1 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 NosD PF05048.8 gi|452210492|ref|YP_007490606.1| - 3.6e-133 441.9 129.3 9.8e-53 178.7 24.0 4.9 2 2 2 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452210492|ref|YP_007490606.1| - 1.8e-49 167.5 140.7 1.8e-18 66.8 20.7 6.4 2 2 3 6 6 6 6 Right handed beta helix region Acetyltransf_4 PF13420.1 gi|452210493|ref|YP_007490607.1| - 7e-21 74.7 0.0 8.1e-21 74.5 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452210493|ref|YP_007490607.1| - 5.1e-12 45.6 0.0 8.7e-12 44.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|452210493|ref|YP_007490607.1| - 3.6e-11 43.4 0.0 4.7e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|452210493|ref|YP_007490607.1| - 3.2e-10 40.0 0.0 6.2e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452210493|ref|YP_007490607.1| - 8.9e-07 29.0 0.0 1.1e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452210493|ref|YP_007490607.1| - 0.00029 20.7 0.0 0.0004 20.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452210493|ref|YP_007490607.1| - 0.00055 19.8 0.0 0.001 18.9 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452210493|ref|YP_007490607.1| - 0.006 16.3 0.0 0.0091 15.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein MOZ_SAS PF01853.13 gi|452210493|ref|YP_007490607.1| - 0.076 12.2 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family TaqI_C PF12950.2 gi|452210496|ref|YP_007490610.1| - 0.00039 20.1 0.0 0.00085 19.0 0.0 1.6 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain Transposase_20 PF02371.11 gi|452210497|ref|YP_007490611.1| - 1.8e-30 104.8 0.0 2e-30 104.7 0.0 1.0 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family HATPase_c PF02518.21 gi|452210498|ref|YP_007490612.1| - 3.3e-14 52.5 0.4 6.8e-14 51.5 0.3 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|452210498|ref|YP_007490612.1| - 4e-10 39.4 0.0 1.3e-09 37.8 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.1 gi|452210498|ref|YP_007490612.1| - 2.5e-08 34.2 0.1 1.5e-07 31.7 0.0 2.4 3 1 0 3 3 3 1 PAS domain PAS_4 PF08448.5 gi|452210498|ref|YP_007490612.1| - 8.8e-06 25.7 0.0 0.00015 21.7 0.0 2.4 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|452210498|ref|YP_007490612.1| - 1.2e-05 25.0 0.0 3.2e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain SPOB_a PF14689.1 gi|452210498|ref|YP_007490612.1| - 0.001 18.5 0.2 0.0038 16.7 0.2 1.9 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_2 PF13581.1 gi|452210498|ref|YP_007490612.1| - 0.013 15.2 0.0 0.026 14.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|452210498|ref|YP_007490612.1| - 0.13 11.9 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase URO-D PF01208.12 gi|452210500|ref|YP_007490614.1| - 1.1e-80 271.1 0.0 1.3e-80 270.9 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) EamA PF00892.15 gi|452210501|ref|YP_007490615.1| - 8.9e-25 87.1 32.1 1.7e-15 57.1 6.3 2.3 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|452210501|ref|YP_007490615.1| - 1.8e-10 40.9 6.9 1.8e-10 40.9 4.8 2.8 2 1 1 3 3 3 1 Multidrug resistance efflux transporter TPT PF03151.11 gi|452210501|ref|YP_007490615.1| - 0.018 14.7 2.4 0.018 14.7 1.7 2.6 2 1 0 2 2 2 0 Triose-phosphate Transporter family DUF914 PF06027.7 gi|452210501|ref|YP_007490615.1| - 0.04 12.7 11.9 0.068 12.0 3.5 2.6 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF914) DUF3366 PF11846.3 gi|452210501|ref|YP_007490615.1| - 0.74 9.6 7.1 1.2 9.0 1.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3366) Phage_holin_1 PF04531.8 gi|452210501|ref|YP_007490615.1| - 1.6 8.8 4.7 19 5.4 0.6 3.1 2 1 1 3 3 3 0 Bacteriophage holin Cupin_2 PF07883.6 gi|452210502|ref|YP_007490616.1| - 9.8e-10 37.8 0.1 1.7e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|452210502|ref|YP_007490616.1| - 3.7e-05 23.4 0.3 0.0051 16.4 0.0 2.8 3 0 0 3 3 3 1 AraC-like ligand binding domain ARD PF03079.9 gi|452210502|ref|YP_007490616.1| - 9.7e-05 22.3 0.5 0.0002 21.3 0.0 1.8 2 0 0 2 2 2 1 ARD/ARD' family Cupin_3 PF05899.7 gi|452210502|ref|YP_007490616.1| - 0.00016 20.9 0.1 0.00027 20.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.17 gi|452210502|ref|YP_007490616.1| - 0.00021 20.7 0.0 0.00031 20.1 0.0 1.3 1 0 0 1 1 1 1 Cupin Cupin_6 PF12852.2 gi|452210502|ref|YP_007490616.1| - 0.0052 16.4 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 Cupin FliG_M PF14841.1 gi|452210502|ref|YP_007490616.1| - 0.0053 16.7 0.2 1.2 9.1 0.0 2.3 2 0 0 2 2 2 1 FliG middle domain HgmA PF04209.8 gi|452210502|ref|YP_007490616.1| - 0.0083 14.5 0.0 0.011 14.1 0.0 1.1 1 0 0 1 1 1 1 homogentisate 1,2-dioxygenase EutQ PF06249.7 gi|452210502|ref|YP_007490616.1| - 0.05 13.1 0.0 0.33 10.4 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.3 gi|452210502|ref|YP_007490616.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like AraC_binding_2 PF14525.1 gi|452210502|ref|YP_007490616.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.6 1 1 0 1 1 1 0 AraC-binding-like domain Acetyltransf_7 PF13508.1 gi|452210503|ref|YP_007490617.1| - 4.1e-08 33.2 0.0 4.8e-06 26.6 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452210503|ref|YP_007490617.1| - 1e-07 31.8 0.1 4.3e-07 29.8 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|452210503|ref|YP_007490617.1| - 9.1e-07 29.0 0.0 0.0038 17.3 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452210503|ref|YP_007490617.1| - 0.099 12.5 0.0 0.4 10.5 0.0 2.0 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase PD40 PF07676.7 gi|452210504|ref|YP_007490618.1| - 2.2e-08 33.5 8.1 1.9 8.2 0.1 6.8 6 2 0 6 6 6 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|452210504|ref|YP_007490618.1| - 7.5e-06 24.7 1.4 0.22 10.0 0.0 4.2 1 1 3 4 4 4 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_4 PF13418.1 gi|452210504|ref|YP_007490618.1| - 0.00018 21.2 0.1 24 4.8 0.0 5.5 6 0 0 6 6 6 1 Galactose oxidase, central domain DUF3155 PF11352.3 gi|452210504|ref|YP_007490618.1| - 0.0076 16.4 0.3 9.2 6.5 0.0 3.6 3 1 1 4 4 4 1 Protein of unknown function (DUF3155) Aha1_N PF09229.6 gi|452210504|ref|YP_007490618.1| - 0.15 11.9 3.7 1.9 8.3 0.0 2.8 2 1 0 2 2 2 0 Activator of Hsp90 ATPase, N-terminal DUF581 PF04570.9 gi|452210504|ref|YP_007490618.1| - 1.3 8.3 14.0 49 3.3 0.1 5.9 6 0 0 6 6 6 0 Protein of unknown function (DUF581) Fe_hyd_SSU PF02256.12 gi|452210505|ref|YP_007490619.1| - 0.011 15.6 0.1 0.012 15.6 0.1 1.0 1 0 0 1 1 1 0 Iron hydrogenase small subunit DUF1949 PF09186.6 gi|452210506|ref|YP_007490620.1| - 1.8e-13 49.8 0.0 2.8e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) UPF0029 PF01205.14 gi|452210506|ref|YP_007490620.1| - 3.2e-07 30.0 0.2 5.9e-07 29.1 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 TRAP_alpha PF03896.11 gi|452210508|ref|YP_007490622.1| - 0.0031 16.5 7.6 0.0041 16.1 5.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit PA26 PF04636.8 gi|452210508|ref|YP_007490622.1| - 0.0038 15.9 1.5 0.0043 15.8 1.1 1.0 1 0 0 1 1 1 1 PA26 p53-induced protein (sestrin) Spore_coat_CotO PF14153.1 gi|452210508|ref|YP_007490622.1| - 0.033 13.6 6.9 0.038 13.4 4.8 1.1 1 0 0 1 1 1 0 Spore coat protein CotO DUF4097 PF13349.1 gi|452210508|ref|YP_007490622.1| - 0.055 13.0 0.0 0.065 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4097) CT47 PF15623.1 gi|452210508|ref|YP_007490622.1| - 0.057 13.1 26.2 0.069 12.8 18.2 1.0 1 0 0 1 1 1 0 Cancer/testis gene family 47 IncA PF04156.9 gi|452210508|ref|YP_007490622.1| - 0.06 12.9 0.6 0.07 12.7 0.4 1.1 1 0 0 1 1 1 0 IncA protein DUF913 PF06025.7 gi|452210508|ref|YP_007490622.1| - 0.062 12.0 1.1 0.075 11.7 0.8 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SID-1_RNA_chan PF13965.1 gi|452210508|ref|YP_007490622.1| - 0.12 10.5 1.4 0.13 10.4 1.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF3530 PF12048.3 gi|452210508|ref|YP_007490622.1| - 0.22 10.4 2.2 0.33 9.9 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Tim54 PF11711.3 gi|452210508|ref|YP_007490622.1| - 2.2 6.7 6.3 2.5 6.5 4.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Podoplanin PF05808.6 gi|452210508|ref|YP_007490622.1| - 4.2 6.9 6.1 5.3 6.5 4.2 1.1 1 0 0 1 1 1 0 Podoplanin SBP_bac_3 PF00497.15 gi|452210509|ref|YP_007490623.1| - 3.1e-67 226.1 0.3 3.8e-67 225.8 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.6 gi|452210509|ref|YP_007490623.1| - 7e-05 22.5 1.0 0.04 13.5 0.1 2.3 1 1 0 2 2 2 2 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|452210509|ref|YP_007490623.1| - 0.00053 19.4 0.1 0.0019 17.6 0.1 1.8 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF4097 PF13349.1 gi|452210509|ref|YP_007490623.1| - 0.028 13.9 0.0 0.078 12.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) BPD_transp_1 PF00528.17 gi|452210510|ref|YP_007490624.1| - 2.8e-23 82.3 5.4 3.6e-23 82.0 3.8 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|452210511|ref|YP_007490625.1| - 8.6e-37 126.4 0.0 1.1e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210511|ref|YP_007490625.1| - 4.4e-17 62.9 0.0 1.9e-10 41.2 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452210511|ref|YP_007490625.1| - 1.4e-09 37.4 0.1 3.4e-07 29.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|452210511|ref|YP_007490625.1| - 1.3e-07 31.3 0.1 0.0087 15.5 0.0 2.1 1 1 0 2 2 2 2 AAA-like domain AAA_16 PF13191.1 gi|452210511|ref|YP_007490625.1| - 5.2e-05 23.3 0.0 0.00011 22.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|452210511|ref|YP_007490625.1| - 6.3e-05 23.1 0.0 0.00056 20.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|452210511|ref|YP_007490625.1| - 7.3e-05 21.9 0.0 0.019 14.0 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|452210511|ref|YP_007490625.1| - 0.00026 20.4 0.0 0.00052 19.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452210511|ref|YP_007490625.1| - 0.00044 19.7 0.0 0.064 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|452210511|ref|YP_007490625.1| - 0.00047 20.9 0.6 0.0013 19.4 0.5 2.0 2 1 0 2 2 1 1 AAA domain AAA_13 PF13166.1 gi|452210511|ref|YP_007490625.1| - 0.0005 18.6 0.0 0.014 13.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.4 gi|452210511|ref|YP_007490625.1| - 0.00062 18.4 0.1 0.17 10.4 0.0 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class DUF258 PF03193.11 gi|452210511|ref|YP_007490625.1| - 0.0012 18.0 0.1 0.0017 17.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|452210511|ref|YP_007490625.1| - 0.002 18.4 0.0 0.0051 17.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|452210511|ref|YP_007490625.1| - 0.0029 17.9 0.1 0.0045 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|452210511|ref|YP_007490625.1| - 0.003 17.4 0.1 0.033 14.1 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|452210511|ref|YP_007490625.1| - 0.003 17.4 0.0 0.006 16.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|452210511|ref|YP_007490625.1| - 0.009 15.7 0.0 0.078 12.6 0.0 2.1 1 1 0 1 1 1 1 Archaeal ATPase T2SE PF00437.15 gi|452210511|ref|YP_007490625.1| - 0.012 14.5 0.0 0.018 13.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.7 gi|452210511|ref|YP_007490625.1| - 0.022 14.4 0.0 0.042 13.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain MobB PF03205.9 gi|452210511|ref|YP_007490625.1| - 0.032 13.9 0.0 0.06 13.0 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.24 gi|452210511|ref|YP_007490625.1| - 0.037 14.2 0.2 0.85 9.8 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IIGP PF05049.8 gi|452210511|ref|YP_007490625.1| - 0.048 12.4 0.1 0.066 12.0 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) XdhC_CoxI PF02625.11 gi|452210511|ref|YP_007490625.1| - 0.06 12.9 0.0 15 5.3 0.0 2.6 3 0 0 3 3 2 0 XdhC and CoxI family FtsK_SpoIIIE PF01580.13 gi|452210511|ref|YP_007490625.1| - 0.063 12.7 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family UPF0079 PF02367.12 gi|452210511|ref|YP_007490625.1| - 0.065 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 DEAD PF00270.24 gi|452210511|ref|YP_007490625.1| - 0.066 12.6 0.0 0.093 12.2 0.0 1.2 1 0 0 1 1 1 0 DEAD/DEAH box helicase G-alpha PF00503.15 gi|452210511|ref|YP_007490625.1| - 0.087 11.4 0.0 0.12 11.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit Rad17 PF03215.10 gi|452210511|ref|YP_007490625.1| - 0.089 11.4 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein ATP_bind_1 PF03029.12 gi|452210511|ref|YP_007490625.1| - 0.12 11.8 0.1 0.42 10.1 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein UbiA PF01040.13 gi|452210512|ref|YP_007490626.1| - 1.3e-31 109.7 17.9 1.6e-31 109.5 12.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Radical_SAM PF04055.16 gi|452210514|ref|YP_007490628.1| - 6.1e-10 39.5 0.0 8.4e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.6 gi|452210514|ref|YP_007490628.1| - 0.006 16.1 0.9 0.017 14.6 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1848) Fer4_14 PF13394.1 gi|452210514|ref|YP_007490628.1| - 0.059 13.3 0.7 0.13 12.3 0.5 1.7 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452210514|ref|YP_007490628.1| - 0.22 11.6 1.3 0.49 10.5 0.9 1.7 1 1 0 1 1 1 0 4Fe-4S single cluster domain CMD PF02627.15 gi|452210515|ref|YP_007490629.1| - 0.00028 20.6 0.0 0.00036 20.3 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Glycos_transf_1 PF00534.15 gi|452210516|ref|YP_007490630.1| - 6.3e-40 136.3 0.1 1.1e-39 135.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452210516|ref|YP_007490630.1| - 2.8e-21 76.3 0.0 4.4e-21 75.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|452210516|ref|YP_007490630.1| - 2.4e-17 63.1 0.0 4.2e-16 59.1 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|452210516|ref|YP_007490630.1| - 2.4e-16 60.0 0.0 1.6e-15 57.4 0.0 2.0 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|452210516|ref|YP_007490630.1| - 1.8e-11 44.0 0.0 6e-11 42.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|452210516|ref|YP_007490630.1| - 2.8e-08 33.9 0.0 5.3e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PIGA PF08288.7 gi|452210516|ref|YP_007490630.1| - 1.2e-06 28.7 0.0 2.6e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_5 PF08323.6 gi|452210516|ref|YP_007490630.1| - 7.2e-05 22.3 0.0 0.00046 19.7 0.0 2.4 2 1 1 3 3 3 1 Starch synthase catalytic domain UPF0104 PF03706.8 gi|452210517|ref|YP_007490631.1| - 9.2e-33 113.7 31.8 1.6e-32 112.9 22.0 1.4 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0104) Aldo_ket_red PF00248.16 gi|452210518|ref|YP_007490632.1| - 1.7e-42 145.1 0.0 2.4e-42 144.7 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|452210518|ref|YP_007490632.1| - 2.7e-12 46.8 9.7 5.6e-12 45.8 6.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210518|ref|YP_007490632.1| - 2.8e-11 43.5 10.0 4.8e-11 42.7 6.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210518|ref|YP_007490632.1| - 5.5e-10 39.1 8.2 1e-09 38.2 5.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452210518|ref|YP_007490632.1| - 3.2e-08 33.8 1.3 0.0011 19.3 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210518|ref|YP_007490632.1| - 1.6e-07 30.9 8.3 2.7e-07 30.2 5.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210518|ref|YP_007490632.1| - 1.7e-05 25.0 8.4 3.4e-05 24.1 5.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452210518|ref|YP_007490632.1| - 0.0012 18.3 11.6 0.0027 17.2 2.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452210518|ref|YP_007490632.1| - 0.0028 17.4 6.1 0.33 10.8 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210518|ref|YP_007490632.1| - 0.032 14.1 13.0 0.096 12.6 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|452210518|ref|YP_007490632.1| - 0.033 13.7 8.6 0.25 10.9 1.5 2.2 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.2 gi|452210518|ref|YP_007490632.1| - 0.039 14.2 16.6 0.059 13.7 3.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452210518|ref|YP_007490632.1| - 0.04 14.4 3.7 0.04 14.4 2.6 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Filament_head PF04732.9 gi|452210518|ref|YP_007490632.1| - 0.12 13.0 0.0 0.23 12.1 0.0 1.4 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region Fer4_6 PF12837.2 gi|452210518|ref|YP_007490632.1| - 0.27 11.1 12.4 0.071 13.0 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452210518|ref|YP_007490632.1| - 1.3 9.6 4.6 4.6 7.8 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452210518|ref|YP_007490632.1| - 2.9 8.6 15.1 3.5 8.4 3.8 2.3 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Methyltransf_31 PF13847.1 gi|452210519|ref|YP_007490633.1| - 3.5e-31 107.8 0.0 6.2e-31 107.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210519|ref|YP_007490633.1| - 2.5e-27 95.2 0.0 9.9e-27 93.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210519|ref|YP_007490633.1| - 6.4e-21 74.6 0.0 1.1e-20 73.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210519|ref|YP_007490633.1| - 2.5e-20 73.1 0.0 1.5e-19 70.5 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210519|ref|YP_007490633.1| - 2.6e-20 72.5 0.0 3.3e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|452210519|ref|YP_007490633.1| - 3.1e-19 69.2 0.0 4e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210519|ref|YP_007490633.1| - 6.3e-17 61.7 0.0 3.2e-16 59.5 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|452210519|ref|YP_007490633.1| - 3.3e-14 52.6 0.0 6.4e-14 51.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|452210519|ref|YP_007490633.1| - 4.9e-12 45.3 0.1 3.9e-11 42.3 0.0 2.0 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_26 PF13659.1 gi|452210519|ref|YP_007490633.1| - 1.2e-10 41.4 0.0 2.6e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452210519|ref|YP_007490633.1| - 6.6e-08 32.3 0.0 1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.6 gi|452210519|ref|YP_007490633.1| - 2.6e-07 30.2 0.0 3.6e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|452210519|ref|YP_007490633.1| - 3.5e-07 29.5 0.0 4.4e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|452210519|ref|YP_007490633.1| - 1.6e-06 27.4 0.0 4.7e-05 22.6 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.9 gi|452210519|ref|YP_007490633.1| - 9.1e-06 24.9 0.0 4.7e-05 22.6 0.0 1.9 2 0 0 2 2 2 1 Tellurite resistance protein TehB TPMT PF05724.6 gi|452210519|ref|YP_007490633.1| - 1.5e-05 24.5 0.0 2.3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_9 PF08003.6 gi|452210519|ref|YP_007490633.1| - 2.7e-05 23.0 0.0 4.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Met_10 PF02475.11 gi|452210519|ref|YP_007490633.1| - 0.00017 21.2 0.0 0.00024 20.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_24 PF13578.1 gi|452210519|ref|YP_007490633.1| - 0.00038 21.2 0.0 0.00093 19.9 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452210519|ref|YP_007490633.1| - 0.00074 18.6 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase GCD14 PF08704.5 gi|452210519|ref|YP_007490633.1| - 0.0011 18.5 0.0 0.0017 17.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit tRNA_U5-meth_tr PF05958.6 gi|452210519|ref|YP_007490633.1| - 0.0012 17.5 0.0 0.002 16.9 0.0 1.3 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase CheR PF01739.13 gi|452210519|ref|YP_007490633.1| - 0.0016 17.7 0.0 0.58 9.3 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain MetW PF07021.7 gi|452210519|ref|YP_007490633.1| - 0.0068 15.7 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW ADH_zinc_N PF00107.21 gi|452210519|ref|YP_007490633.1| - 0.0086 15.6 0.0 0.03 13.8 0.0 1.9 1 1 0 1 1 1 1 Zinc-binding dehydrogenase UPF0020 PF01170.13 gi|452210519|ref|YP_007490633.1| - 0.0097 15.4 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_PK PF05891.7 gi|452210519|ref|YP_007490633.1| - 0.011 15.0 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_15 PF09445.5 gi|452210519|ref|YP_007490633.1| - 0.015 14.8 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NAS PF03059.11 gi|452210519|ref|YP_007490633.1| - 0.02 14.0 0.0 0.028 13.5 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein Methyltransf_8 PF05148.10 gi|452210519|ref|YP_007490633.1| - 0.024 14.2 0.0 0.046 13.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_32 PF13679.1 gi|452210519|ref|YP_007490633.1| - 0.025 14.2 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.14 gi|452210519|ref|YP_007490633.1| - 0.028 14.3 0.0 0.11 12.4 0.0 2.1 1 1 0 1 1 1 0 FtsJ-like methyltransferase N2227 PF07942.7 gi|452210519|ref|YP_007490633.1| - 0.066 12.1 0.0 4.6 6.1 0.0 2.1 1 1 1 2 2 2 0 N2227-like protein DUF3791 PF12668.2 gi|452210519|ref|YP_007490633.1| - 0.068 12.7 0.0 0.27 10.8 0.0 2.0 2 0 0 2 2 1 0 Protein of unknown function (DUF3791) DUF938 PF06080.7 gi|452210519|ref|YP_007490633.1| - 0.073 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_3 PF01596.12 gi|452210519|ref|YP_007490633.1| - 0.093 11.7 0.0 0.23 10.4 0.0 1.6 1 1 1 2 2 2 0 O-methyltransferase Methyltransf_16 PF10294.4 gi|452210519|ref|YP_007490633.1| - 0.12 11.8 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Catalase PF00199.14 gi|452210520|ref|YP_007490634.1| - 7.5e-171 568.0 0.1 9.6e-171 567.6 0.1 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.7 gi|452210520|ref|YP_007490634.1| - 2.4e-23 81.7 0.1 5.5e-23 80.6 0.0 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive DJ-1_PfpI PF01965.19 gi|452210520|ref|YP_007490634.1| - 7.2e-15 54.7 0.1 6.7e-14 51.5 0.0 2.2 1 1 0 1 1 1 1 DJ-1/PfpI family Cation_efflux PF01545.16 gi|452210525|ref|YP_007490639.1| - 1.9e-43 148.5 5.7 1.8e-36 125.6 0.2 2.2 1 1 1 2 2 2 2 Cation efflux family NifU_N PF01592.11 gi|452210526|ref|YP_007490640.1| - 1.1e-42 144.9 0.0 1.8e-42 144.2 0.0 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain DUF59 PF01883.14 gi|452210526|ref|YP_007490640.1| - 1.4e-09 37.7 2.3 2.1e-09 37.2 0.8 1.9 2 0 0 2 2 2 1 Domain of unknown function DUF59 Aminotran_5 PF00266.14 gi|452210527|ref|YP_007490641.1| - 3e-62 210.5 0.0 4.1e-62 210.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|452210527|ref|YP_007490641.1| - 8.8e-06 24.9 0.0 1.6e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|452210527|ref|YP_007490641.1| - 1.2e-05 24.5 0.0 1.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|452210527|ref|YP_007490641.1| - 0.00052 18.4 0.1 0.00094 17.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|452210527|ref|YP_007490641.1| - 0.0028 16.6 0.0 0.004 16.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II SLA_LP_auto_ag PF05889.8 gi|452210527|ref|YP_007490641.1| - 0.063 11.7 0.0 0.098 11.1 0.0 1.3 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Pyridoxal_deC PF00282.14 gi|452210527|ref|YP_007490641.1| - 0.1 11.0 0.0 0.26 9.7 0.0 1.6 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain DrsE_2 PF13686.1 gi|452210528|ref|YP_007490642.1| - 8.9e-35 119.6 3.5 2.3e-34 118.3 2.4 1.5 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.10 gi|452210528|ref|YP_007490642.1| - 2.8e-06 27.3 0.0 4.6e-06 26.6 0.0 1.3 1 1 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.12 gi|452210529|ref|YP_007490643.1| - 3.7e-20 71.2 0.2 4e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|452210529|ref|YP_007490643.1| - 0.042 13.4 0.0 1.9 8.1 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) HIT PF01230.18 gi|452210530|ref|YP_007490644.1| - 5.3e-32 110.2 0.0 6.8e-31 106.7 0.0 1.9 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.3 gi|452210530|ref|YP_007490644.1| - 2.5e-19 69.6 0.0 3.9e-19 68.9 0.0 1.3 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|452210530|ref|YP_007490644.1| - 0.006 16.2 0.0 0.0091 15.6 0.0 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 PQ-loop PF04193.9 gi|452210531|ref|YP_007490645.1| - 5.2e-10 38.7 0.5 5.2e-10 38.7 0.4 1.5 2 0 0 2 2 2 1 PQ loop repeat MtN3_slv PF03083.11 gi|452210531|ref|YP_007490645.1| - 3.8e-08 33.0 0.9 4.7e-08 32.7 0.6 1.3 1 1 0 1 1 1 1 Sugar efflux transporter for intercellular exchange LAB_N PF07578.6 gi|452210531|ref|YP_007490645.1| - 0.0029 17.4 0.3 0.0039 17.0 0.2 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain DUF2593 PF10767.4 gi|452210531|ref|YP_007490645.1| - 0.085 12.5 0.4 0.2 11.3 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2593) CARDB PF07705.6 gi|452210532|ref|YP_007490646.1| - 9.8e-103 336.9 18.3 1.8e-27 95.3 3.6 4.6 4 0 0 4 4 4 4 CARDB DUF11 PF01345.13 gi|452210532|ref|YP_007490646.1| - 1.1e-12 47.8 8.0 0.0046 16.9 0.0 4.9 5 0 0 5 5 5 4 Domain of unknown function DUF11 Serglycin PF04360.7 gi|452210532|ref|YP_007490646.1| - 0.08 12.6 1.0 0.19 11.4 0.7 1.6 1 0 0 1 1 1 0 Serglycin DUF4101 PF13355.1 gi|452210532|ref|YP_007490646.1| - 0.28 11.5 4.7 33 4.9 0.2 4.2 4 0 0 4 4 4 0 Protein of unknown function (DUF4101) tRNA-synt_1b PF00579.20 gi|452210534|ref|YP_007490648.1| - 1e-56 192.2 0.0 1.2e-56 191.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|452210534|ref|YP_007490648.1| - 0.066 11.8 0.0 2.3 6.7 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) Msg2_C PF12373.3 gi|452210534|ref|YP_007490648.1| - 0.33 10.2 1.8 0.71 9.1 1.3 1.6 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Thg1C PF14413.1 gi|452210535|ref|YP_007490649.1| - 1.6e-27 95.5 0.5 2.2e-27 95.1 0.3 1.1 1 0 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.7 gi|452210535|ref|YP_007490649.1| - 6.5e-27 93.8 0.0 8.8e-27 93.3 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase PRC PF05239.11 gi|452210536|ref|YP_007490650.1| - 6.5e-06 25.9 0.9 8.4e-06 25.5 0.7 1.1 1 0 0 1 1 1 1 PRC-barrel domain DUF650 PF04894.7 gi|452210536|ref|YP_007490650.1| - 0.033 13.6 0.1 0.033 13.6 0.1 1.1 1 0 0 1 1 1 0 Archaeal protein of unknown function (DUF650) Ldh_1_N PF00056.18 gi|452210537|ref|YP_007490651.1| - 8.1e-38 129.4 1.6 1.3e-37 128.7 1.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|452210537|ref|YP_007490651.1| - 1.4e-33 116.0 0.0 2.1e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.11 gi|452210537|ref|YP_007490651.1| - 7.5e-05 22.1 1.4 0.00028 20.2 0.1 2.1 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.9 gi|452210537|ref|YP_007490651.1| - 0.00043 19.7 0.7 0.0042 16.4 0.5 2.2 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ThiF PF00899.16 gi|452210537|ref|YP_007490651.1| - 0.0074 16.1 0.1 0.02 14.7 0.1 1.7 1 0 0 1 1 1 1 ThiF family F420_oxidored PF03807.12 gi|452210537|ref|YP_007490651.1| - 0.056 13.8 2.8 0.14 12.5 0.2 2.7 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.19 gi|452210537|ref|YP_007490651.1| - 0.081 13.2 0.1 0.26 11.5 0.0 1.8 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain RNase_H_2 PF13482.1 gi|452210538|ref|YP_007490652.1| - 6.4e-35 120.3 0.0 1e-34 119.7 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.4 gi|452210538|ref|YP_007490652.1| - 2.5e-05 23.9 0.0 0.15 11.5 0.0 2.2 2 0 0 2 2 2 2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB HHH_5 PF14520.1 gi|452210538|ref|YP_007490652.1| - 0.0022 18.1 0.0 0.006 16.7 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain GPI PF06560.6 gi|452210539|ref|YP_007490653.1| - 1.2e-76 255.8 0.0 1.5e-76 255.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.6 gi|452210539|ref|YP_007490653.1| - 0.00054 19.4 0.4 0.0027 17.1 0.2 2.4 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.17 gi|452210539|ref|YP_007490653.1| - 0.0019 17.6 0.0 0.0029 17.0 0.0 1.2 1 0 0 1 1 1 1 Cupin ARD PF03079.9 gi|452210539|ref|YP_007490653.1| - 0.06 13.2 0.2 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 ARD/ARD' family JmjC PF02373.17 gi|452210539|ref|YP_007490653.1| - 0.13 12.5 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Ribosomal_L9_N PF01281.14 gi|452210539|ref|YP_007490653.1| - 0.38 10.0 2.5 3 7.1 0.0 2.6 3 0 0 3 3 3 0 Ribosomal protein L9, N-terminal domain DUF128 PF01995.11 gi|452210540|ref|YP_007490654.1| - 1.9e-88 295.3 0.6 2.2e-88 295.1 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF128 DHHA1 PF02272.14 gi|452210542|ref|YP_007490656.1| - 9.1e-16 57.3 1.3 1.8e-15 56.3 0.9 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|452210542|ref|YP_007490656.1| - 1.4e-14 53.9 0.2 2.2e-14 53.3 0.1 1.3 1 0 0 1 1 1 1 DHH family SelA PF03841.8 gi|452210542|ref|YP_007490656.1| - 0.0028 16.4 0.0 0.0055 15.4 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DUF1699 PF08004.6 gi|452210544|ref|YP_007490658.1| - 1.7e-63 212.0 1.6 1.8e-63 211.8 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Metalloenzyme PF01676.13 gi|452210544|ref|YP_007490658.1| - 0.095 12.0 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Metalloenzyme superfamily cwf21 PF08312.7 gi|452210544|ref|YP_007490658.1| - 0.55 10.1 4.8 0.15 11.9 1.2 1.6 2 0 0 2 2 2 0 cwf21 domain Radical_SAM PF04055.16 gi|452210545|ref|YP_007490659.1| - 1.1e-15 58.1 0.0 2.8e-15 56.8 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|452210545|ref|YP_007490659.1| - 8.9e-11 41.6 0.5 4.9e-10 39.2 0.1 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|452210545|ref|YP_007490659.1| - 0.0006 19.9 0.0 0.0019 18.3 0.0 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|452210545|ref|YP_007490659.1| - 0.0037 17.4 0.0 0.01 15.9 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain zinc_ribbon_5 PF13719.1 gi|452210545|ref|YP_007490659.1| - 0.015 14.8 1.3 0.033 13.7 0.9 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|452210545|ref|YP_007490659.1| - 0.023 14.4 1.3 0.051 13.2 0.9 1.5 1 0 0 1 1 1 0 zinc-ribbon domain S-layer PF07752.6 gi|452210547|ref|YP_007490661.1| - 4.9e-152 504.4 27.5 2e-96 322.1 9.6 3.1 2 1 1 3 3 3 3 S-layer protein PT PF04886.7 gi|452210547|ref|YP_007490661.1| - 0.036 13.3 8.7 0.066 12.5 6.0 1.3 1 0 0 1 1 1 0 PT repeat tRNA-synt_1c_C PF03950.13 gi|452210547|ref|YP_007490661.1| - 0.31 10.7 2.9 3.5 7.2 0.1 2.8 3 0 0 3 3 3 0 tRNA synthetases class I (E and Q), anti-codon binding domain Amidohydro_3 PF07969.6 gi|452210549|ref|YP_007490663.1| - 4.9e-69 233.4 0.0 5.8e-69 233.2 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|452210549|ref|YP_007490663.1| - 1.9e-08 33.9 0.2 4.4e-07 29.6 0.0 3.1 4 0 0 4 4 4 1 Amidohydrolase Molybdopterin PF00384.17 gi|452210550|ref|YP_007490664.1| - 1e-20 73.9 0.1 6e-20 71.3 0.1 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.11 gi|452210550|ref|YP_007490664.1| - 0.024 14.4 0.2 0.075 12.8 0.1 1.8 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Viral_cys_rich PF08008.7 gi|452210550|ref|YP_007490664.1| - 0.14 11.7 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Viral cysteine rich Molydop_binding PF01568.16 gi|452210551|ref|YP_007490665.1| - 3.5e-15 55.7 0.0 4.4e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF2946 PF11162.3 gi|452210551|ref|YP_007490665.1| - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Alkyl_sulf_dimr PF14863.1 gi|452210552|ref|YP_007490666.1| - 1.1e-33 116.4 0.2 2.1e-33 115.5 0.1 1.5 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.1 gi|452210552|ref|YP_007490666.1| - 2.9e-13 49.8 0.2 5.1e-13 49.0 0.1 1.4 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Lactamase_B PF00753.22 gi|452210552|ref|YP_007490666.1| - 1.7e-11 44.1 0.2 4.1e-11 42.8 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SCP2 PF02036.12 gi|452210552|ref|YP_007490666.1| - 1.5e-09 38.0 0.1 4.9e-09 36.3 0.0 1.9 2 0 0 2 2 2 1 SCP-2 sterol transfer family Lactamase_B_2 PF12706.2 gi|452210552|ref|YP_007490666.1| - 0.037 13.5 0.3 0.067 12.7 0.2 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|452210552|ref|YP_007490666.1| - 0.071 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain PKD PF00801.15 gi|452210553|ref|YP_007490667.1| - 1.4e-79 261.7 97.6 5.6e-11 42.0 2.3 12.2 12 0 0 12 12 12 9 PKD domain Big_1 PF02369.11 gi|452210553|ref|YP_007490667.1| - 1.1e-08 34.8 2.1 1.1e-08 34.8 1.5 9.2 10 1 0 11 11 11 2 Bacterial Ig-like domain (group 1) Hemerythrin PF01814.18 gi|452210555|ref|YP_007490669.1| - 1.5e-15 57.4 6.2 2.1e-15 57.0 4.3 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain Mst1_SARAH PF11629.3 gi|452210555|ref|YP_007490669.1| - 0.013 15.3 2.8 1.3 8.9 0.0 2.9 3 1 0 3 3 3 0 C terminal SARAH domain of Mst1 BCDHK_Adom3 PF10436.4 gi|452210555|ref|YP_007490669.1| - 0.2 11.1 1.4 0.24 10.8 1.0 1.2 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase ING PF12998.2 gi|452210555|ref|YP_007490669.1| - 0.21 11.9 5.4 0.14 12.4 2.1 1.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding TROVE PF05731.6 gi|452210555|ref|YP_007490669.1| - 0.22 10.2 5.3 0.24 10.1 3.7 1.1 1 0 0 1 1 1 0 TROVE domain Seryl_tRNA_N PF02403.17 gi|452210555|ref|YP_007490669.1| - 0.23 11.5 11.1 0.32 11.0 6.3 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Mitofilin PF09731.4 gi|452210555|ref|YP_007490669.1| - 0.26 9.9 15.0 0.29 9.7 10.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Hormone_1 PF00103.15 gi|452210555|ref|YP_007490669.1| - 0.53 9.5 5.2 0.73 9.1 3.4 1.4 1 1 0 1 1 1 0 Somatotropin hormone family HSP70 PF00012.15 gi|452210555|ref|YP_007490669.1| - 0.89 7.3 7.9 0.87 7.4 5.5 1.1 1 0 0 1 1 1 0 Hsp70 protein PIN_4 PF13638.1 gi|452210555|ref|YP_007490669.1| - 0.97 9.5 4.4 1.5 8.9 3.0 1.6 1 1 0 1 1 1 0 PIN domain IncA PF04156.9 gi|452210555|ref|YP_007490669.1| - 2 7.9 10.6 3.4 7.2 7.4 1.5 1 1 0 1 1 1 0 IncA protein Hemerythrin PF01814.18 gi|452210556|ref|YP_007490670.1| - 2.8e-15 56.6 7.2 4.3e-15 56.0 5.0 1.3 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain SurA_N_2 PF13623.1 gi|452210556|ref|YP_007490670.1| - 0.082 12.8 0.2 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 SurA N-terminal domain Med9 PF07544.8 gi|452210556|ref|YP_007490670.1| - 0.34 10.6 2.2 0.4 10.4 0.4 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 PPV_E1_N PF00524.13 gi|452210556|ref|YP_007490670.1| - 0.99 9.6 4.5 3.3 7.9 0.9 2.2 1 1 1 2 2 2 0 E1 Protein, N terminal domain PRA-PH PF01503.12 gi|452210556|ref|YP_007490670.1| - 1.1 9.5 5.4 0.25 11.6 0.4 2.2 2 1 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase PhoU PF01895.14 gi|452210557|ref|YP_007490671.1| - 5.9e-25 87.5 7.8 2e-19 69.8 1.2 2.6 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|452210557|ref|YP_007490671.1| - 0.00014 21.4 0.0 0.00034 20.2 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE Membr_traf_MHD PF10540.4 gi|452210557|ref|YP_007490671.1| - 0.034 13.9 0.0 0.69 9.7 0.0 2.3 2 0 0 2 2 2 0 Munc13 (mammalian uncoordinated) homology domain DUF1391 PF07151.7 gi|452210558|ref|YP_007490672.1| - 0.15 11.5 0.1 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) HTH_38 PF13936.1 gi|452210559|ref|YP_007490673.1| - 0.059 12.9 0.0 0.093 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Alph_Pro_TM PF09608.5 gi|452210560|ref|YP_007490674.1| - 0.014 14.9 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Putative transmembrane protein (Alph_Pro_TM) CARDB PF07705.6 gi|452210561|ref|YP_007490675.1| - 0.0011 19.0 2.7 0.0022 18.0 0.4 2.2 2 0 0 2 2 2 1 CARDB CtaG_Cox11 PF04442.9 gi|452210561|ref|YP_007490675.1| - 0.039 13.7 0.1 0.08 12.7 0.1 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 Integrin_alpha2 PF08441.7 gi|452210561|ref|YP_007490675.1| - 0.047 12.5 0.3 0.064 12.0 0.2 1.2 1 0 0 1 1 1 0 Integrin alpha FixG_C PF11614.3 gi|452210561|ref|YP_007490675.1| - 0.053 13.6 0.5 0.39 10.8 0.0 2.3 1 1 1 2 2 2 0 IG-like fold at C-terminal of FixG, putative oxidoreductase Lipoprotein_19 PF13617.1 gi|452210561|ref|YP_007490675.1| - 0.092 12.3 0.1 0.21 11.2 0.1 1.6 1 0 0 1 1 1 0 YnbE-like lipoprotein LPAM_1 PF08139.7 gi|452210561|ref|YP_007490675.1| - 0.093 12.9 3.5 0.2 11.9 2.4 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site CBM49 PF09478.5 gi|452210561|ref|YP_007490675.1| - 0.14 12.3 0.9 0.94 9.6 0.1 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain CBM49 DUF2393 PF09624.5 gi|452210561|ref|YP_007490675.1| - 1.2 8.6 4.7 0.6 9.6 0.1 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2393) ABC2_membrane PF01061.19 gi|452210562|ref|YP_007490676.1| - 7.6e-31 106.9 18.6 1.2e-30 106.3 12.9 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|452210562|ref|YP_007490676.1| - 7.1e-15 54.8 24.6 9e-15 54.5 17.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein FA_desaturase PF00487.19 gi|452210562|ref|YP_007490676.1| - 4 6.7 9.0 3 7.2 1.0 2.2 1 1 0 2 2 2 0 Fatty acid desaturase ABC_tran PF00005.22 gi|452210563|ref|YP_007490677.1| - 5.3e-29 101.2 0.0 8.3e-29 100.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210563|ref|YP_007490677.1| - 3.8e-12 46.7 0.0 2.6e-08 34.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|452210563|ref|YP_007490677.1| - 2e-05 25.0 0.0 2e-05 25.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452210563|ref|YP_007490677.1| - 3e-05 23.4 0.2 6.6e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|452210563|ref|YP_007490677.1| - 0.0017 17.4 0.0 0.067 12.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.14 gi|452210563|ref|YP_007490677.1| - 0.025 13.8 0.0 0.26 10.5 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|452210563|ref|YP_007490677.1| - 0.029 13.5 0.0 0.045 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MukB PF04310.7 gi|452210563|ref|YP_007490677.1| - 0.041 13.2 0.1 0.069 12.4 0.1 1.4 1 1 0 1 1 1 0 MukB N-terminal KdpD PF02702.12 gi|452210563|ref|YP_007490677.1| - 0.056 12.5 0.0 0.074 12.1 0.0 1.3 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain AAA_PrkA PF08298.6 gi|452210563|ref|YP_007490677.1| - 0.061 12.0 0.0 0.11 11.2 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain CbiQ PF02361.11 gi|452210564|ref|YP_007490678.1| - 6.2e-28 97.8 10.8 6.2e-28 97.8 7.5 1.3 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.22 gi|452210565|ref|YP_007490679.1| - 1.3e-54 184.2 0.1 9.6e-27 93.9 0.1 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452210565|ref|YP_007490679.1| - 1.6e-15 57.8 3.9 0.00011 22.2 0.0 4.2 2 2 1 3 3 3 3 AAA domain AAA_29 PF13555.1 gi|452210565|ref|YP_007490679.1| - 3.4e-11 42.5 0.1 0.00033 20.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.14 gi|452210565|ref|YP_007490679.1| - 4.5e-10 39.1 1.4 0.00061 19.0 0.1 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|452210565|ref|YP_007490679.1| - 1.9e-09 37.2 0.1 0.0019 17.6 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|452210565|ref|YP_007490679.1| - 4e-09 36.7 0.2 6.9e-05 22.9 0.0 3.0 2 2 0 2 2 2 2 AAA ATPase domain AAA_10 PF12846.2 gi|452210565|ref|YP_007490679.1| - 8.9e-09 35.1 2.4 0.087 12.2 0.0 3.3 3 0 0 3 3 3 3 AAA-like domain T2SE PF00437.15 gi|452210565|ref|YP_007490679.1| - 2.3e-07 29.9 0.1 0.00081 18.3 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_18 PF13238.1 gi|452210565|ref|YP_007490679.1| - 3.2e-07 30.7 0.5 0.062 13.6 0.1 3.3 3 0 0 3 3 3 2 AAA domain AAA_17 PF13207.1 gi|452210565|ref|YP_007490679.1| - 4.9e-07 30.5 0.2 0.053 14.3 0.1 3.0 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|452210565|ref|YP_007490679.1| - 1.3e-06 28.9 0.1 0.0063 16.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.1 gi|452210565|ref|YP_007490679.1| - 1.3e-06 28.2 0.1 0.091 12.6 0.0 3.1 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.1 gi|452210565|ref|YP_007490679.1| - 4.2e-06 26.8 1.4 0.034 14.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|452210565|ref|YP_007490679.1| - 6.4e-06 26.3 2.9 0.031 14.4 0.1 3.2 3 1 0 3 3 3 2 AAA domain DUF258 PF03193.11 gi|452210565|ref|YP_007490679.1| - 9.1e-06 24.9 0.1 0.014 14.5 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|452210565|ref|YP_007490679.1| - 1e-05 25.3 0.0 0.02 14.5 0.0 2.3 2 0 0 2 2 2 2 Archaeal ATPase AAA_14 PF13173.1 gi|452210565|ref|YP_007490679.1| - 1.7e-05 24.7 0.1 0.05 13.4 0.0 2.7 2 1 0 2 2 2 2 AAA domain NACHT PF05729.7 gi|452210565|ref|YP_007490679.1| - 2e-05 24.3 0.2 0.16 11.6 0.0 2.5 2 0 0 2 2 2 2 NACHT domain Mg_chelatase PF01078.16 gi|452210565|ref|YP_007490679.1| - 2.7e-05 23.4 0.2 0.0024 17.0 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI ArgK PF03308.11 gi|452210565|ref|YP_007490679.1| - 8.8e-05 21.4 0.3 0.028 13.2 0.0 2.4 2 0 0 2 2 2 1 ArgK protein Miro PF08477.8 gi|452210565|ref|YP_007490679.1| - 0.00012 22.5 0.1 0.076 13.5 0.0 2.5 2 0 0 2 2 2 1 Miro-like protein AAA_19 PF13245.1 gi|452210565|ref|YP_007490679.1| - 0.00013 21.6 0.1 0.8 9.4 0.0 2.5 2 0 0 2 2 2 2 Part of AAA domain AAA_5 PF07728.9 gi|452210565|ref|YP_007490679.1| - 0.00014 21.6 0.5 0.11 12.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) DAP3 PF10236.4 gi|452210565|ref|YP_007490679.1| - 0.00015 20.8 0.9 0.25 10.2 0.1 2.3 2 0 0 2 2 2 2 Mitochondrial ribosomal death-associated protein 3 RNA_helicase PF00910.17 gi|452210565|ref|YP_007490679.1| - 0.00017 21.6 0.2 0.18 12.0 0.0 2.8 3 0 0 3 3 2 1 RNA helicase MobB PF03205.9 gi|452210565|ref|YP_007490679.1| - 0.00027 20.6 0.3 0.29 10.8 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 gi|452210565|ref|YP_007490679.1| - 0.00027 20.8 0.1 0.74 9.6 0.1 2.5 2 0 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.13 gi|452210565|ref|YP_007490679.1| - 0.00029 20.3 0.3 0.053 12.9 0.0 2.4 2 0 0 2 2 2 1 FtsK/SpoIIIE family NTPase_1 PF03266.10 gi|452210565|ref|YP_007490679.1| - 0.00043 20.0 0.9 0.67 9.6 0.2 2.7 3 0 0 3 3 2 2 NTPase AAA_15 PF13175.1 gi|452210565|ref|YP_007490679.1| - 0.00048 19.2 0.7 6.4 5.7 0.0 3.4 4 0 0 4 4 3 0 AAA ATPase domain AAA_30 PF13604.1 gi|452210565|ref|YP_007490679.1| - 0.00059 19.4 0.1 0.52 9.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|452210565|ref|YP_007490679.1| - 0.00086 19.2 0.4 1.7 8.6 0.0 2.8 2 1 0 2 2 2 2 50S ribosome-binding GTPase AAA PF00004.24 gi|452210565|ref|YP_007490679.1| - 0.0018 18.4 1.9 0.081 13.1 0.0 2.9 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) KaiC PF06745.8 gi|452210565|ref|YP_007490679.1| - 0.002 17.2 4.7 2.1 7.3 0.1 3.7 4 0 0 4 4 4 1 KaiC Zeta_toxin PF06414.7 gi|452210565|ref|YP_007490679.1| - 0.0022 17.0 0.1 1.3 8.0 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin Rad17 PF03215.10 gi|452210565|ref|YP_007490679.1| - 0.0026 16.5 0.1 0.0051 15.5 0.1 1.4 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein MutS_V PF00488.16 gi|452210565|ref|YP_007490679.1| - 0.0032 16.9 0.0 0.57 9.5 0.0 2.6 3 0 0 3 3 2 1 MutS domain V ABC_ATPase PF09818.4 gi|452210565|ref|YP_007490679.1| - 0.0042 15.7 2.4 3.2 6.2 0.0 3.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class Viral_helicase1 PF01443.13 gi|452210565|ref|YP_007490679.1| - 0.0046 16.4 0.4 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PduV-EutP PF10662.4 gi|452210565|ref|YP_007490679.1| - 0.0047 16.4 0.1 0.76 9.2 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation SRP54 PF00448.17 gi|452210565|ref|YP_007490679.1| - 0.005 16.2 0.7 0.2 11.0 0.1 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain UPF0079 PF02367.12 gi|452210565|ref|YP_007490679.1| - 0.0091 15.6 1.0 0.19 11.3 0.1 2.3 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 NB-ARC PF00931.17 gi|452210565|ref|YP_007490679.1| - 0.0096 14.8 0.4 0.34 9.7 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain ATP_bind_1 PF03029.12 gi|452210565|ref|YP_007490679.1| - 0.01 15.3 0.4 2.1 7.8 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PIF1 PF05970.9 gi|452210565|ref|YP_007490679.1| - 0.013 14.5 0.2 0.74 8.6 0.0 2.2 2 0 0 2 2 2 0 PIF1-like helicase ATP-synt_ab PF00006.20 gi|452210565|ref|YP_007490679.1| - 0.015 14.8 0.1 3.1 7.2 0.0 2.4 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.1 gi|452210565|ref|YP_007490679.1| - 0.021 14.4 0.2 4.9 6.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.15 gi|452210565|ref|YP_007490679.1| - 0.023 13.4 0.3 1.8 7.1 0.1 2.2 2 0 0 2 2 2 0 G-protein alpha subunit DUF815 PF05673.8 gi|452210565|ref|YP_007490679.1| - 0.025 13.5 0.2 0.59 9.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) cobW PF02492.14 gi|452210565|ref|YP_007490679.1| - 0.029 13.8 4.2 1.8 7.9 0.1 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain TrwB_AAD_bind PF10412.4 gi|452210565|ref|YP_007490679.1| - 0.037 12.6 0.5 1.2 7.7 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Adeno_IVa2 PF02456.10 gi|452210565|ref|YP_007490679.1| - 0.047 12.3 0.0 2.1 6.8 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein PC4 PF02229.11 gi|452210565|ref|YP_007490679.1| - 0.049 12.8 0.2 0.76 9.0 0.0 2.3 2 0 0 2 2 2 0 Transcriptional Coactivator p15 (PC4) PRK PF00485.13 gi|452210565|ref|YP_007490679.1| - 0.081 12.4 0.1 2.6 7.5 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family IstB_IS21 PF01695.12 gi|452210565|ref|YP_007490679.1| - 0.12 11.7 0.6 2.8 7.3 0.1 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein CbiA PF01656.18 gi|452210565|ref|YP_007490679.1| - 0.13 11.6 1.8 0.24 10.8 0.0 2.2 3 0 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF87 PF01935.12 gi|452210565|ref|YP_007490679.1| - 0.13 12.0 0.9 4.6 6.9 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function DUF87 IIGP PF05049.8 gi|452210565|ref|YP_007490679.1| - 0.19 10.5 0.3 7 5.3 0.1 2.3 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) DUF3584 PF12128.3 gi|452210565|ref|YP_007490679.1| - 0.3 8.3 0.2 0.43 7.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Dynamin_N PF00350.18 gi|452210565|ref|YP_007490679.1| - 0.34 10.6 2.3 13 5.5 0.1 2.5 2 0 0 2 2 2 0 Dynamin family NPCBM_assoc PF10633.4 gi|452210566|ref|YP_007490680.1| - 0.028 14.4 0.0 5.4 7.1 0.0 2.7 2 1 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4625 PF15418.1 gi|452210566|ref|YP_007490680.1| - 0.037 14.1 0.0 0.073 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) CobN-Mg_chel PF02514.11 gi|452210567|ref|YP_007490681.1| - 0 1253.7 0.0 0 1253.5 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase DUF3479 PF11965.3 gi|452210567|ref|YP_007490681.1| - 0.16 11.7 0.0 0.36 10.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) OmdA PF13376.1 gi|452210567|ref|YP_007490681.1| - 0.52 9.9 2.7 5.3 6.7 0.0 3.1 3 0 0 3 3 3 0 Bacteriocin-protection, YdeI or OmpD-Associated Nnf1 PF03980.9 gi|452210567|ref|YP_007490681.1| - 0.83 9.6 3.6 1.3 9.0 0.1 2.7 3 0 0 3 3 3 0 Nnf1 PQQ_2 PF13360.1 gi|452210568|ref|YP_007490682.1| - 2e-14 53.6 3.1 9e-09 35.1 0.4 3.1 1 1 2 3 3 3 3 PQQ-like domain PQQ_3 PF13570.1 gi|452210568|ref|YP_007490682.1| - 3.1e-10 39.9 8.1 0.0086 16.3 0.0 7.3 7 0 0 7 7 7 3 PQQ-like domain PQQ PF01011.16 gi|452210568|ref|YP_007490682.1| - 8.3e-08 31.3 0.2 0.0047 16.3 0.0 5.4 6 0 0 6 6 6 2 PQQ enzyme repeat S-layer PF07752.6 gi|452210571|ref|YP_007490685.1| - 2.5e-93 312.0 6.5 2.2e-74 249.9 0.2 3.0 2 1 0 2 2 2 2 S-layer protein VWA_2 PF13519.1 gi|452210572|ref|YP_007490686.1| - 1e-20 74.5 0.0 2.1e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.16 gi|452210572|ref|YP_007490686.1| - 2.4e-13 49.7 0.1 2.7e-09 36.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI VWA PF00092.23 gi|452210572|ref|YP_007490686.1| - 1.1e-11 44.7 0.0 2.6e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.9 gi|452210572|ref|YP_007490686.1| - 2.5e-10 40.2 0.2 2.3e-06 27.4 0.0 2.9 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|452210572|ref|YP_007490686.1| - 1.5e-05 25.1 0.0 6.7e-05 23.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain MCM PF00493.18 gi|452210572|ref|YP_007490686.1| - 3.8e-05 22.6 6.0 0.00053 18.8 0.0 3.4 2 2 1 3 3 3 2 MCM2/3/5 family Sigma54_activat PF00158.21 gi|452210572|ref|YP_007490686.1| - 0.00052 19.5 0.1 0.2 11.1 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.6 gi|452210572|ref|YP_007490686.1| - 0.0068 16.0 0.0 0.37 10.3 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) VWA_3 PF13768.1 gi|452210572|ref|YP_007490686.1| - 0.016 14.9 0.0 0.035 13.8 0.0 1.5 1 0 0 1 1 1 0 von Willebrand factor type A domain AAA_16 PF13191.1 gi|452210572|ref|YP_007490686.1| - 0.02 14.8 0.0 0.068 13.1 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA PF00004.24 gi|452210572|ref|YP_007490686.1| - 0.034 14.3 0.0 0.18 11.9 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BSMAP PF12280.3 gi|452210572|ref|YP_007490686.1| - 0.12 12.2 2.8 0.2 11.5 1.9 1.3 1 0 0 1 1 1 0 Brain specific membrane anchored protein Ycf1 PF05758.7 gi|452210572|ref|YP_007490686.1| - 0.79 7.3 10.6 1.1 6.9 7.4 1.1 1 0 0 1 1 1 0 Ycf1 Neur_chan_memb PF02932.11 gi|452210572|ref|YP_007490686.1| - 5 6.9 5.0 7.3 6.3 3.5 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.9 gi|452210572|ref|YP_007490686.1| - 5.5 4.8 14.6 8.6 4.2 10.1 1.2 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.7 gi|452210572|ref|YP_007490686.1| - 8.3 6.2 14.6 13 5.6 10.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 FemAB PF02388.11 gi|452210572|ref|YP_007490686.1| - 9.9 4.7 12.2 14 4.2 8.5 1.1 1 0 0 1 1 1 0 FemAB family DNA_pol_B PF00136.16 gi|452210573|ref|YP_007490687.1| - 1.2e-110 370.5 0.0 1.7e-110 369.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|452210573|ref|YP_007490687.1| - 5.2e-54 183.2 0.0 8.4e-54 182.6 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.4 gi|452210573|ref|YP_007490687.1| - 0.0021 17.6 0.0 0.0042 16.6 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB PBP_like_2 PF12849.2 gi|452210574|ref|YP_007490688.1| - 1.3e-50 172.5 3.3 2.3e-50 171.6 2.3 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.2 gi|452210574|ref|YP_007490688.1| - 2.6e-23 81.9 0.0 3.2e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|452210574|ref|YP_007490688.1| - 3.6e-08 33.3 0.0 2.6e-07 30.4 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|452210574|ref|YP_007490688.1| - 0.067 12.9 0.3 0.22 11.2 0.2 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.17 gi|452210575|ref|YP_007490689.1| - 2.5e-21 76.0 20.6 2.5e-21 76.0 14.3 2.2 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF1295 PF06966.7 gi|452210575|ref|YP_007490689.1| - 0.48 9.6 0.0 0.48 9.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1295) BPD_transp_1 PF00528.17 gi|452210576|ref|YP_007490690.1| - 2.4e-26 92.3 14.1 2.4e-26 92.3 9.8 2.5 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3333 PF11812.3 gi|452210576|ref|YP_007490690.1| - 0.052 13.5 1.0 0.11 12.5 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) ABC_tran PF00005.22 gi|452210577|ref|YP_007490691.1| - 2.3e-30 105.7 0.0 3.2e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210577|ref|YP_007490691.1| - 1.9e-12 47.7 0.1 8.1e-09 35.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452210577|ref|YP_007490691.1| - 4.4e-08 32.6 0.1 3.2e-06 26.5 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|452210577|ref|YP_007490691.1| - 0.00033 20.1 0.0 0.00064 19.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain KaiC PF06745.8 gi|452210577|ref|YP_007490691.1| - 0.00067 18.8 0.0 0.0013 17.9 0.0 1.5 2 0 0 2 2 2 1 KaiC AAA_29 PF13555.1 gi|452210577|ref|YP_007490691.1| - 0.0008 18.8 0.0 0.0015 18.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|452210577|ref|YP_007490691.1| - 0.0015 18.2 0.0 0.69 9.7 0.0 2.3 2 0 0 2 2 2 1 Part of AAA domain DUF258 PF03193.11 gi|452210577|ref|YP_007490691.1| - 0.0025 17.0 0.0 0.0041 16.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA PF00004.24 gi|452210577|ref|YP_007490691.1| - 0.0075 16.4 0.0 0.083 13.0 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PPV_E1_C PF00519.12 gi|452210577|ref|YP_007490691.1| - 0.0083 14.7 0.0 0.012 14.2 0.0 1.1 1 0 0 1 1 1 1 Papillomavirus helicase Rad17 PF03215.10 gi|452210577|ref|YP_007490691.1| - 0.0083 14.8 0.0 0.012 14.2 0.0 1.2 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|452210577|ref|YP_007490691.1| - 0.01 15.9 0.0 0.06 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|452210577|ref|YP_007490691.1| - 0.013 15.3 0.0 0.022 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|452210577|ref|YP_007490691.1| - 0.018 15.0 0.1 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_14 PF13173.1 gi|452210577|ref|YP_007490691.1| - 0.034 14.0 0.0 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.1 gi|452210577|ref|YP_007490691.1| - 0.04 12.9 0.2 2.2 7.2 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.1 gi|452210577|ref|YP_007490691.1| - 0.043 13.7 0.1 0.64 9.9 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|452210577|ref|YP_007490691.1| - 0.053 12.9 0.0 0.12 11.7 0.0 1.4 1 1 0 1 1 1 0 AAA-like domain AAA_23 PF13476.1 gi|452210577|ref|YP_007490691.1| - 0.067 13.5 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|452210577|ref|YP_007490691.1| - 0.072 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_17 PF13207.1 gi|452210577|ref|YP_007490691.1| - 0.079 13.7 0.4 0.13 13.0 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|452210577|ref|YP_007490691.1| - 0.18 10.2 0.1 0.48 8.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoU PF01895.14 gi|452210578|ref|YP_007490692.1| - 4.3e-34 116.8 6.1 7.3e-19 68.0 1.1 2.1 2 0 0 2 2 2 2 PhoU domain Amidohydro_4 PF13147.1 gi|452210579|ref|YP_007490693.1| - 5.1e-30 105.4 0.0 7.7e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|452210579|ref|YP_007490693.1| - 5.1e-17 62.5 0.1 1.7e-16 60.8 0.1 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|452210579|ref|YP_007490693.1| - 6.8e-11 41.8 0.3 2e-10 40.3 0.2 1.8 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|452210579|ref|YP_007490693.1| - 1.1e-05 24.8 0.0 0.0086 15.3 0.0 2.7 3 0 0 3 3 3 2 Amidohydrolase family KH_1 PF00013.24 gi|452210580|ref|YP_007490694.1| - 1.9e-13 49.8 9.2 1.3e-09 37.5 0.9 2.3 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|452210580|ref|YP_007490694.1| - 8.5e-08 31.6 2.5 7.7e-05 22.2 0.2 2.6 2 0 0 2 2 2 2 KH domain KH_2 PF07650.12 gi|452210580|ref|YP_007490694.1| - 0.0019 17.6 4.1 0.68 9.5 0.2 2.5 2 0 0 2 2 2 2 KH domain Ribosomal_L6 PF00347.18 gi|452210580|ref|YP_007490694.1| - 0.062 13.8 1.8 1.9 9.0 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L6 KH_4 PF13083.1 gi|452210580|ref|YP_007490694.1| - 0.095 12.3 5.3 1.5 8.5 0.1 3.3 2 1 1 3 3 3 0 KH domain RIO1 PF01163.17 gi|452210581|ref|YP_007490695.1| - 1.6e-62 210.2 0.3 2.2e-62 209.7 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|452210581|ref|YP_007490695.1| - 2.4e-08 33.4 0.0 3.6e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.9 gi|452210581|ref|YP_007490695.1| - 0.00071 18.7 0.3 0.0079 15.2 0.0 2.3 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.18 gi|452210581|ref|YP_007490695.1| - 0.00077 19.2 0.0 0.0047 16.6 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.15 gi|452210581|ref|YP_007490695.1| - 0.059 12.9 0.3 0.16 11.4 0.2 1.8 1 1 0 1 1 1 0 Choline/ethanolamine kinase eIF-1a PF01176.14 gi|452210582|ref|YP_007490696.1| - 4.9e-21 73.9 0.2 5.8e-21 73.6 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Med14 PF08638.6 gi|452210582|ref|YP_007490696.1| - 0.097 11.9 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit MED14 DUF4425 PF14466.1 gi|452210584|ref|YP_007490698.1| - 0.017 15.2 0.0 0.044 13.9 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4425) GDE_C PF06202.9 gi|452210585|ref|YP_007490699.1| - 6.4e-141 469.3 0.0 1.3e-140 468.3 0.0 1.5 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|452210585|ref|YP_007490699.1| - 5.8e-62 208.8 0.0 8.5e-62 208.2 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.8 gi|452210585|ref|YP_007490699.1| - 0.0002 20.1 0.4 0.00072 18.3 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function, DUF608 Glyco_hydro_100 PF12899.2 gi|452210585|ref|YP_007490699.1| - 0.02 13.3 0.0 1.8 6.8 0.0 2.7 2 1 0 2 2 2 0 Alkaline and neutral invertase Bac_rhamnosid PF05592.6 gi|452210585|ref|YP_007490699.1| - 0.024 12.8 0.0 0.034 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase PRA-CH PF01502.13 gi|452210586|ref|YP_007490700.1| - 4.1e-28 96.8 0.3 5.2e-28 96.4 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase T2SE PF00437.15 gi|452210587|ref|YP_007490701.1| - 1.2e-12 47.2 0.2 2.2e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 gi|452210587|ref|YP_007490701.1| - 2.4e-10 39.9 1.4 7.6e-10 38.2 1.0 1.9 1 0 0 1 1 1 1 KH domain PIN_4 PF13638.1 gi|452210587|ref|YP_007490701.1| - 6.5e-05 23.0 0.0 0.00017 21.7 0.0 1.7 1 0 0 1 1 1 1 PIN domain AAA_22 PF13401.1 gi|452210587|ref|YP_007490701.1| - 0.00011 22.3 0.0 0.086 12.9 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_17 PF13207.1 gi|452210587|ref|YP_007490701.1| - 0.00016 22.4 0.0 0.00053 20.8 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|452210587|ref|YP_007490701.1| - 0.00029 20.5 0.0 0.00096 18.8 0.0 1.9 1 0 0 1 1 1 1 Part of AAA domain TIP49 PF06068.8 gi|452210587|ref|YP_007490701.1| - 0.00054 18.7 0.4 0.0015 17.3 0.0 1.8 2 0 0 2 2 2 1 TIP49 C-terminus Zeta_toxin PF06414.7 gi|452210587|ref|YP_007490701.1| - 0.00097 18.2 0.0 0.0019 17.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin KH_2 PF07650.12 gi|452210587|ref|YP_007490701.1| - 0.0013 18.2 1.2 0.005 16.3 0.8 2.0 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|452210587|ref|YP_007490701.1| - 0.0013 18.3 0.5 0.0043 16.6 0.4 1.8 1 0 0 1 1 1 1 KH domain AAA_16 PF13191.1 gi|452210587|ref|YP_007490701.1| - 0.0015 18.5 0.0 0.0028 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.1 gi|452210587|ref|YP_007490701.1| - 0.0038 17.0 0.0 0.0083 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain KH_4 PF13083.1 gi|452210587|ref|YP_007490701.1| - 0.0052 16.4 0.3 0.018 14.6 0.2 1.9 1 0 0 1 1 1 1 KH domain KaiC PF06745.8 gi|452210587|ref|YP_007490701.1| - 0.01 14.9 0.0 0.059 12.4 0.0 2.3 2 1 1 3 3 3 0 KaiC AAA PF00004.24 gi|452210587|ref|YP_007490701.1| - 0.014 15.5 0.0 0.037 14.2 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.1 gi|452210587|ref|YP_007490701.1| - 0.017 14.6 0.0 0.043 13.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.10 gi|452210587|ref|YP_007490701.1| - 0.018 14.7 0.0 0.055 13.1 0.0 1.8 1 0 0 1 1 1 0 NTPase AAA_25 PF13481.1 gi|452210587|ref|YP_007490701.1| - 0.022 14.1 0.0 0.052 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|452210587|ref|YP_007490701.1| - 0.023 15.0 0.0 0.061 13.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|452210587|ref|YP_007490701.1| - 0.033 13.9 0.0 0.094 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.15 gi|452210587|ref|YP_007490701.1| - 0.035 13.7 0.0 0.29 10.7 0.0 2.2 2 0 0 2 2 2 0 Adenylylsulphate kinase IstB_IS21 PF01695.12 gi|452210587|ref|YP_007490701.1| - 0.047 13.1 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.1 gi|452210587|ref|YP_007490701.1| - 0.053 13.0 0.1 0.13 11.7 0.0 1.6 2 0 0 2 2 1 0 AAA domain KTI12 PF08433.5 gi|452210587|ref|YP_007490701.1| - 0.062 12.4 0.0 0.12 11.5 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_11 PF13086.1 gi|452210587|ref|YP_007490701.1| - 0.087 12.3 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|452210587|ref|YP_007490701.1| - 0.096 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.12 gi|452210587|ref|YP_007490701.1| - 0.12 11.7 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 Thymidylate kinase ATP_bind_1 PF03029.12 gi|452210587|ref|YP_007490701.1| - 0.12 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein UPF0079 PF02367.12 gi|452210587|ref|YP_007490701.1| - 0.13 11.8 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 NACHT PF05729.7 gi|452210587|ref|YP_007490701.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain PPV_E1_C PF00519.12 gi|452210587|ref|YP_007490701.1| - 0.35 9.4 0.0 0.52 8.8 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase TBPIP PF07106.8 gi|452210588|ref|YP_007490702.1| - 0.023 14.2 2.0 0.92 9.0 0.2 2.2 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Prefoldin_2 PF01920.15 gi|452210588|ref|YP_007490702.1| - 0.035 13.8 4.3 2.2 8.0 0.0 2.8 2 1 1 3 3 3 0 Prefoldin subunit DUF4631 PF15450.1 gi|452210588|ref|YP_007490702.1| - 0.037 12.3 0.8 0.18 10.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4631) Reo_sigmaC PF04582.7 gi|452210588|ref|YP_007490702.1| - 0.038 13.1 1.4 0.049 12.7 0.6 1.5 2 0 0 2 2 2 0 Reovirus sigma C capsid protein Prefoldin_3 PF13758.1 gi|452210588|ref|YP_007490702.1| - 0.044 13.5 1.7 0.3 10.8 0.1 2.5 2 1 0 2 2 2 0 Prefoldin subunit Baculo_PEP_C PF04513.7 gi|452210588|ref|YP_007490702.1| - 0.053 13.3 0.1 0.22 11.3 0.0 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.7 gi|452210588|ref|YP_007490702.1| - 0.1 12.4 0.3 1.1 9.0 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.6 gi|452210588|ref|YP_007490702.1| - 0.11 12.4 2.4 0.5 10.2 0.0 2.8 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Sipho_Gp157 PF05565.6 gi|452210588|ref|YP_007490702.1| - 0.12 11.9 0.9 6.4 6.3 0.1 2.3 2 0 0 2 2 2 0 Siphovirus Gp157 DUF4164 PF13747.1 gi|452210588|ref|YP_007490702.1| - 0.21 11.7 2.4 0.35 11.0 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) Myosin_tail_1 PF01576.14 gi|452210588|ref|YP_007490702.1| - 0.87 7.2 3.2 0.37 8.4 0.2 1.7 2 0 0 2 2 2 0 Myosin tail TMF_DNA_bd PF12329.3 gi|452210588|ref|YP_007490702.1| - 0.93 9.3 3.0 2.4 8.0 0.3 2.5 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF4140 PF13600.1 gi|452210588|ref|YP_007490702.1| - 1.2 9.6 3.9 11 6.5 0.1 2.9 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) MAGE_N PF12440.3 gi|452210588|ref|YP_007490702.1| - 2.9 8.2 6.7 22 5.4 4.7 2.1 1 1 0 1 1 1 0 Melanoma associated antigen family N terminal CarboxypepD_reg PF13620.1 gi|452210589|ref|YP_007490703.1| - 0.016 15.2 0.0 0.054 13.5 0.0 1.9 1 1 1 2 2 2 0 Carboxypeptidase regulatory-like domain CarboxypepD_reg PF13620.1 gi|452210590|ref|YP_007490704.1| - 2.9e-05 24.0 0.9 0.00018 21.4 0.6 2.2 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain Big_1 PF02369.11 gi|452210590|ref|YP_007490704.1| - 6.1e-05 22.8 2.1 0.0001 22.1 1.5 1.3 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) DUF824 PF05688.6 gi|452210590|ref|YP_007490704.1| - 0.0062 16.1 0.1 0.015 14.9 0.1 1.6 1 0 0 1 1 1 1 Salmonella repeat of unknown function (DUF824) DUF4480 PF13715.1 gi|452210590|ref|YP_007490704.1| - 0.024 14.6 0.2 0.06 13.3 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4480) MMgT PF10270.4 gi|452210590|ref|YP_007490704.1| - 0.047 14.1 0.2 0.064 13.6 0.1 1.3 1 0 0 1 1 1 0 Membrane magnesium transporter GATase PF00117.23 gi|452210591|ref|YP_007490705.1| - 9.3e-32 110.0 0.0 1e-31 109.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|452210591|ref|YP_007490705.1| - 8.7e-08 31.9 0.2 1e-06 28.4 0.0 2.0 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|452210591|ref|YP_007490705.1| - 1.2e-07 31.4 0.0 2.3e-07 30.4 0.0 1.4 2 0 0 2 2 2 1 Peptidase C26 SNO PF01174.14 gi|452210591|ref|YP_007490705.1| - 4.2e-07 29.7 0.0 2.3e-06 27.3 0.0 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family DJ-1_PfpI PF01965.19 gi|452210591|ref|YP_007490705.1| - 0.0057 16.1 0.0 0.011 15.1 0.0 1.4 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.1 gi|452210591|ref|YP_007490705.1| - 0.04 12.8 0.0 0.48 9.2 0.0 2.1 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.17 gi|452210592|ref|YP_007490706.1| - 7.1e-18 65.0 1.0 1.2e-17 64.3 0.7 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|452210592|ref|YP_007490706.1| - 1.1e-14 54.4 0.1 1e-13 51.3 0.0 2.3 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain NfeD PF01957.13 gi|452210593|ref|YP_007490707.1| - 9e-35 119.9 2.8 9e-35 119.9 2.0 2.4 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.18 gi|452210593|ref|YP_007490707.1| - 1.8e-05 24.5 0.2 2.9e-05 23.8 0.2 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.11 gi|452210593|ref|YP_007490707.1| - 0.029 13.1 0.4 0.05 12.3 0.3 1.4 1 0 0 1 1 1 0 Serine dehydrogenase proteinase FMN_dh PF01070.13 gi|452210593|ref|YP_007490707.1| - 0.059 12.2 0.0 0.083 11.7 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase ECH PF00378.15 gi|452210593|ref|YP_007490707.1| - 0.08 12.0 0.1 1 8.4 0.1 2.1 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase family DUF1450 PF07293.6 gi|452210593|ref|YP_007490707.1| - 0.082 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) Band_7 PF01145.20 gi|452210594|ref|YP_007490708.1| - 4.4e-39 134.2 3.0 6.3e-39 133.7 2.1 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.1 gi|452210594|ref|YP_007490708.1| - 8.4e-05 22.1 0.1 0.00013 21.5 0.1 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family Ground-like PF04155.13 gi|452210594|ref|YP_007490708.1| - 0.057 13.7 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 Ground-like domain DHH PF01368.15 gi|452210595|ref|YP_007490709.1| - 3.2e-11 43.0 0.1 7.5e-11 41.8 0.1 1.6 1 1 0 1 1 1 1 DHH family tRNA_anti-codon PF01336.20 gi|452210595|ref|YP_007490709.1| - 9.2e-10 38.2 0.0 2.3e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DnaJ_CXXCXGXG PF00684.14 gi|452210595|ref|YP_007490709.1| - 2.5e-08 33.8 8.3 2.5e-08 33.8 5.8 2.7 1 1 2 3 3 3 1 DnaJ central domain S1 PF00575.18 gi|452210595|ref|YP_007490709.1| - 0.00015 21.8 0.4 0.00046 20.2 0.3 1.9 1 0 0 1 1 1 1 S1 RNA binding domain Flavi_glycop_C PF02832.11 gi|452210595|ref|YP_007490709.1| - 0.092 12.6 0.4 16 5.4 0.0 2.9 2 1 0 2 2 2 0 Flavivirus glycoprotein, immunoglobulin-like domain Pribosyltran PF00156.22 gi|452210596|ref|YP_007490710.1| - 5.2e-23 81.1 0.3 8.1e-23 80.4 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|452210596|ref|YP_007490710.1| - 7e-07 28.7 0.4 7.9e-06 25.3 0.0 2.1 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|452210596|ref|YP_007490710.1| - 4.4e-05 22.7 2.1 0.00012 21.4 0.2 2.0 1 1 0 2 2 2 1 Uracil phosphoribosyltransferase HTH_7 PF02796.10 gi|452210596|ref|YP_007490710.1| - 0.00021 21.0 0.0 0.0005 19.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4_2 PF08281.7 gi|452210596|ref|YP_007490710.1| - 0.0014 18.0 0.0 0.03 13.7 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|452210596|ref|YP_007490710.1| - 0.0027 17.3 0.0 0.0057 16.2 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain PRTase_3 PF15610.1 gi|452210596|ref|YP_007490710.1| - 0.0085 15.0 0.2 0.063 12.1 0.0 1.9 1 1 0 2 2 2 1 PRTase ComF-like GerE PF00196.14 gi|452210596|ref|YP_007490710.1| - 0.013 14.7 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_11 PF08279.7 gi|452210596|ref|YP_007490710.1| - 0.014 15.0 0.1 0.046 13.3 0.0 1.9 2 0 0 2 2 2 0 HTH domain DUF2481 PF10654.4 gi|452210596|ref|YP_007490710.1| - 0.04 13.5 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) Sigma70_r4 PF04545.11 gi|452210596|ref|YP_007490710.1| - 0.08 12.2 0.0 0.26 10.6 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 PAX PF00292.13 gi|452210596|ref|YP_007490710.1| - 0.091 12.4 0.1 0.6 9.8 0.0 2.1 2 1 0 2 2 2 0 'Paired box' domain PIN_4 PF13638.1 gi|452210597|ref|YP_007490711.1| - 0.0014 18.7 0.3 0.0022 18.1 0.2 1.3 1 1 0 1 1 1 1 PIN domain zinc-ribbons_6 PF07191.7 gi|452210597|ref|YP_007490711.1| - 0.013 15.2 0.6 0.03 14.1 0.4 1.6 1 0 0 1 1 1 0 zinc-ribbons PIN PF01850.16 gi|452210597|ref|YP_007490711.1| - 0.014 15.6 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 PIN domain DNA_ligase_ZBD PF03119.11 gi|452210597|ref|YP_007490711.1| - 0.047 13.3 0.3 0.1 12.3 0.2 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain UPF0278 PF08745.6 gi|452210597|ref|YP_007490711.1| - 0.051 12.8 0.4 0.1 11.8 0.2 1.5 1 1 1 2 2 2 0 UPF0278 family DUF4411 PF14367.1 gi|452210597|ref|YP_007490711.1| - 0.057 13.1 0.1 0.1 12.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) zf-C4_Topoisom PF01396.14 gi|452210597|ref|YP_007490711.1| - 0.074 12.5 1.8 0.18 11.3 1.2 1.6 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|452210597|ref|YP_007490711.1| - 0.1 12.2 0.9 0.17 11.5 0.7 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Rad50_zn_hook PF04423.9 gi|452210597|ref|YP_007490711.1| - 0.5 9.8 7.3 0.13 11.7 2.2 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif Prok-RING_1 PF14446.1 gi|452210597|ref|YP_007490711.1| - 0.64 9.7 4.0 1.7 8.4 2.8 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 DUF2072 PF09845.4 gi|452210597|ref|YP_007490711.1| - 1.5 8.7 5.6 1.8 8.5 2.0 2.1 2 0 0 2 2 2 0 Zn-ribbon containing protein (DUF2072) DUF169 PF02596.10 gi|452210598|ref|YP_007490712.1| - 9.9e-69 231.0 0.1 1.1e-68 230.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Ribosomal_S8e PF01201.17 gi|452210600|ref|YP_007490714.1| - 7.9e-36 123.1 7.1 8.6e-36 122.9 4.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e AsnC_trans_reg PF01037.16 gi|452210601|ref|YP_007490715.1| - 2.1e-17 62.6 0.2 4.6e-17 61.4 0.1 1.6 2 0 0 2 2 2 1 AsnC family HTH_24 PF13412.1 gi|452210601|ref|YP_007490715.1| - 1.2e-11 43.7 0.0 3.8e-11 42.1 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|452210601|ref|YP_007490715.1| - 8.5e-10 38.0 0.1 2.3e-09 36.6 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.2 gi|452210601|ref|YP_007490715.1| - 5.9e-06 25.9 0.0 1e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|452210601|ref|YP_007490715.1| - 3.8e-05 23.2 0.0 7.2e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|452210601|ref|YP_007490715.1| - 4.7e-05 23.1 0.0 0.00019 21.1 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_11 PF08279.7 gi|452210601|ref|YP_007490715.1| - 9.3e-05 22.0 0.1 0.00029 20.3 0.1 1.9 1 1 0 1 1 1 1 HTH domain TFIIE_alpha PF02002.12 gi|452210601|ref|YP_007490715.1| - 0.00012 21.5 0.2 0.00019 20.8 0.2 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.17 gi|452210601|ref|YP_007490715.1| - 0.00078 19.1 0.1 0.0015 18.1 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|452210601|ref|YP_007490715.1| - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|452210601|ref|YP_007490715.1| - 0.0031 17.3 0.2 0.0083 16.0 0.1 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.1 gi|452210601|ref|YP_007490715.1| - 0.0048 16.4 0.1 0.01 15.3 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2250 PF10007.4 gi|452210601|ref|YP_007490715.1| - 0.0062 16.4 0.1 0.011 15.6 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF2513 PF10711.4 gi|452210601|ref|YP_007490715.1| - 0.0079 16.2 0.3 0.015 15.3 0.1 1.6 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) HTH_27 PF13463.1 gi|452210601|ref|YP_007490715.1| - 0.034 14.4 0.1 0.088 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|452210601|ref|YP_007490715.1| - 0.036 14.1 0.2 0.16 12.1 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulator RepL PF05732.6 gi|452210601|ref|YP_007490715.1| - 0.041 13.0 0.0 0.086 12.0 0.0 1.5 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.1 gi|452210601|ref|YP_007490715.1| - 0.047 13.8 0.0 0.084 13.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.5 gi|452210601|ref|YP_007490715.1| - 0.06 12.9 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain FaeA PF04703.7 gi|452210601|ref|YP_007490715.1| - 0.069 13.3 0.1 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein Phage_rep_org_N PF09681.5 gi|452210601|ref|YP_007490715.1| - 0.086 12.4 0.2 1.5 8.3 0.0 2.3 1 1 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) TrmB PF01978.14 gi|452210601|ref|YP_007490715.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Aminotran_1_2 PF00155.16 gi|452210602|ref|YP_007490716.1| - 3.1e-59 200.7 0.0 3.5e-59 200.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|452210602|ref|YP_007490716.1| - 8.4e-12 44.7 0.6 1.3e-11 44.2 0.4 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|452210602|ref|YP_007490716.1| - 1.4e-07 30.5 0.0 2.1e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|452210602|ref|YP_007490716.1| - 0.0022 16.3 0.2 0.004 15.4 0.1 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.15 gi|452210602|ref|YP_007490716.1| - 0.0025 16.4 0.0 0.0034 15.9 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Alliinase_C PF04864.8 gi|452210602|ref|YP_007490716.1| - 0.095 11.3 0.0 0.36 9.4 0.0 1.8 2 0 0 2 2 2 0 Allinase B12-binding PF02310.14 gi|452210603|ref|YP_007490717.1| - 1.2e-22 80.0 1.0 1.9e-22 79.3 0.3 1.6 2 0 0 2 2 2 1 B12 binding domain B12-binding_2 PF02607.12 gi|452210603|ref|YP_007490717.1| - 2.7e-19 68.9 0.5 5.5e-19 67.9 0.4 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|452210604|ref|YP_007490718.1| - 7.6e-26 90.3 0.5 7.6e-26 90.3 0.3 1.7 2 0 0 2 2 2 1 B12 binding domain B12-binding_2 PF02607.12 gi|452210604|ref|YP_007490718.1| - 1.3e-09 37.9 1.8 1.2e-07 31.6 1.3 2.5 1 1 0 1 1 1 1 B12 binding domain ComA PF02679.10 gi|452210604|ref|YP_007490718.1| - 0.02 13.9 1.3 0.098 11.6 0.1 2.0 1 1 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) SpoVAD PF07451.6 gi|452210604|ref|YP_007490718.1| - 0.023 13.1 0.0 0.03 12.8 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) BMC PF00936.14 gi|452210604|ref|YP_007490718.1| - 0.033 13.8 2.6 0.31 10.7 0.2 2.6 2 0 0 2 2 2 0 BMC domain WCOR413 PF05562.6 gi|452210605|ref|YP_007490719.1| - 0.11 11.9 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 UPF0051 PF01458.12 gi|452210607|ref|YP_007490721.1| - 3.5e-47 160.7 0.1 4.5e-47 160.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.22 gi|452210608|ref|YP_007490722.1| - 3.1e-25 89.0 0.1 4.1e-25 88.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210608|ref|YP_007490722.1| - 2.8e-13 50.5 0.7 1.8e-06 28.1 0.0 2.2 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452210608|ref|YP_007490722.1| - 1.6e-11 43.8 0.1 2.4e-07 30.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_13 PF13166.1 gi|452210608|ref|YP_007490722.1| - 0.0015 17.1 0.0 0.19 10.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|452210608|ref|YP_007490722.1| - 0.0082 15.6 0.0 0.019 14.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|452210608|ref|YP_007490722.1| - 0.011 15.9 0.4 0.032 14.3 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|452210608|ref|YP_007490722.1| - 0.023 14.1 0.0 0.042 13.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|452210608|ref|YP_007490722.1| - 0.032 14.5 0.9 0.065 13.5 0.6 1.8 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|452210608|ref|YP_007490722.1| - 0.052 13.4 0.0 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|452210608|ref|YP_007490722.1| - 0.057 13.2 0.0 0.084 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|452210608|ref|YP_007490722.1| - 0.091 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.1 gi|452210608|ref|YP_007490722.1| - 0.14 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTP_transf_3 PF12804.2 gi|452210609|ref|YP_007490723.1| - 1.6e-14 54.2 0.0 2.2e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|452210609|ref|YP_007490723.1| - 5e-07 29.5 0.0 0.0017 17.9 0.0 2.1 2 0 0 2 2 2 2 Cytidylyltransferase IspD PF01128.14 gi|452210609|ref|YP_007490723.1| - 6.3e-06 25.8 0.0 3.2e-05 23.5 0.0 2.0 1 1 1 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|452210609|ref|YP_007490723.1| - 0.0014 17.9 0.0 0.0021 17.3 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase CofC PF01983.11 gi|452210609|ref|YP_007490723.1| - 0.03 13.2 0.1 0.039 12.9 0.1 1.3 1 1 0 1 1 1 0 Guanylyl transferase CofC like LIP PF03583.9 gi|452210609|ref|YP_007490723.1| - 0.11 11.6 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase CobS PF02654.10 gi|452210610|ref|YP_007490724.1| - 3.8e-49 167.4 10.9 8.1e-49 166.3 7.5 1.5 1 1 0 1 1 1 1 Cobalamin-5-phosphate synthase Dispanin PF04505.7 gi|452210610|ref|YP_007490724.1| - 0.022 14.2 0.2 0.086 12.3 0.1 2.0 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF2755 PF10954.3 gi|452210610|ref|YP_007490724.1| - 0.25 11.0 2.9 8.9 6.0 0.0 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2755) PgpA PF04608.8 gi|452210611|ref|YP_007490725.1| - 2.2e-09 37.2 0.0 2.9e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobD_Cbib PF03186.8 gi|452210612|ref|YP_007490726.1| - 1.5e-99 332.7 0.1 1.8e-99 332.5 0.1 1.0 1 0 0 1 1 1 1 CobD/Cbib protein Aminotran_1_2 PF00155.16 gi|452210613|ref|YP_007490727.1| - 3e-43 148.1 0.0 3.6e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.7 gi|452210613|ref|YP_007490727.1| - 4.7e-32 109.5 7.3 1e-31 108.4 5.1 1.5 1 0 0 1 1 1 1 Cysteine-rich small domain tRNA-synt_His PF13393.1 gi|452210614|ref|YP_007490728.1| - 5.2e-59 199.8 0.0 7e-59 199.4 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|452210614|ref|YP_007490728.1| - 1.3e-22 80.1 0.0 2.3e-22 79.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|452210614|ref|YP_007490728.1| - 1.7e-13 50.3 0.1 2.8e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.15 gi|452210614|ref|YP_007490728.1| - 4.5e-05 22.3 0.4 0.31 9.7 0.0 2.6 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.15 gi|452210614|ref|YP_007490728.1| - 0.023 13.8 0.0 0.11 11.7 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) Ribosomal_S13_N PF08069.7 gi|452210619|ref|YP_007490733.1| - 6.6e-26 89.9 0.3 1.7e-25 88.5 0.2 1.7 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|452210619|ref|YP_007490733.1| - 8.4e-21 73.5 0.4 1.1e-20 73.1 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 ABC_tran PF00005.22 gi|452210620|ref|YP_007490734.1| - 9.3e-30 103.7 0.0 1.2e-29 103.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210620|ref|YP_007490734.1| - 1.1e-11 45.2 1.1 0.00011 22.2 0.1 2.2 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|452210620|ref|YP_007490734.1| - 3e-06 26.5 0.1 0.0075 15.3 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|452210620|ref|YP_007490734.1| - 2.4e-05 23.7 0.0 6e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452210620|ref|YP_007490734.1| - 3.6e-05 23.8 0.1 5.8e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.1 gi|452210620|ref|YP_007490734.1| - 8e-05 23.0 0.1 0.00018 21.9 0.0 1.3 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|452210620|ref|YP_007490734.1| - 0.00025 20.2 0.0 0.00039 19.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 ABC_ATPase PF09818.4 gi|452210620|ref|YP_007490734.1| - 0.00031 19.4 0.5 0.21 10.1 0.1 3.1 2 2 0 2 2 2 1 Predicted ATPase of the ABC class SMC_N PF02463.14 gi|452210620|ref|YP_007490734.1| - 0.00031 20.0 0.2 0.37 9.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|452210620|ref|YP_007490734.1| - 0.00048 20.2 1.0 0.0074 16.4 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452210620|ref|YP_007490734.1| - 0.0027 17.9 0.2 0.031 14.4 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|452210620|ref|YP_007490734.1| - 0.0032 18.2 0.2 0.0047 17.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|452210620|ref|YP_007490734.1| - 0.0048 16.8 0.1 0.058 13.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|452210620|ref|YP_007490734.1| - 0.0085 15.8 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|452210620|ref|YP_007490734.1| - 0.01 14.7 0.1 0.07 11.9 0.0 2.1 2 1 0 2 2 2 0 NB-ARC domain Arch_ATPase PF01637.13 gi|452210620|ref|YP_007490734.1| - 0.01 15.5 0.0 0.022 14.4 0.0 1.5 1 0 0 1 1 1 0 Archaeal ATPase NACHT PF05729.7 gi|452210620|ref|YP_007490734.1| - 0.011 15.4 0.2 0.027 14.1 0.0 1.6 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.17 gi|452210620|ref|YP_007490734.1| - 0.016 14.6 0.2 0.036 13.5 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain UPF0079 PF02367.12 gi|452210620|ref|YP_007490734.1| - 0.017 14.7 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_30 PF13604.1 gi|452210620|ref|YP_007490734.1| - 0.017 14.7 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|452210620|ref|YP_007490734.1| - 0.017 14.5 0.0 0.038 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|452210620|ref|YP_007490734.1| - 0.018 14.6 0.0 0.032 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|452210620|ref|YP_007490734.1| - 0.019 15.2 1.1 0.054 13.8 0.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|452210620|ref|YP_007490734.1| - 0.021 13.3 0.0 3.5 5.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|452210620|ref|YP_007490734.1| - 0.025 14.2 0.8 0.26 10.9 0.0 2.5 2 1 0 2 2 2 0 NTPase ArgK PF03308.11 gi|452210620|ref|YP_007490734.1| - 0.025 13.3 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 ArgK protein AAA_33 PF13671.1 gi|452210620|ref|YP_007490734.1| - 0.029 14.2 0.0 0.057 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|452210620|ref|YP_007490734.1| - 0.03 14.0 0.1 0.074 12.8 0.1 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA_5 PF07728.9 gi|452210620|ref|YP_007490734.1| - 0.036 13.7 0.3 1.5 8.4 0.1 2.7 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_10 PF12846.2 gi|452210620|ref|YP_007490734.1| - 0.058 12.8 0.1 0.15 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA-like domain AAA_28 PF13521.1 gi|452210620|ref|YP_007490734.1| - 0.069 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.1 gi|452210620|ref|YP_007490734.1| - 0.077 12.9 0.1 0.63 9.9 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.12 gi|452210620|ref|YP_007490734.1| - 0.078 12.3 0.0 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein FecCD PF01032.13 gi|452210621|ref|YP_007490735.1| - 1.1e-92 310.2 34.5 1.3e-92 309.9 23.9 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.12 gi|452210621|ref|YP_007490735.1| - 2e-07 30.5 11.6 2e-07 30.5 8.1 1.8 1 1 0 1 1 1 1 ABC 3 transport family Peripla_BP_2 PF01497.13 gi|452210622|ref|YP_007490736.1| - 3.9e-23 81.8 0.1 5.7e-23 81.2 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein DUF1995 PF09353.5 gi|452210622|ref|YP_007490736.1| - 0.12 11.9 0.0 0.29 10.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1995) QRPTase_C PF01729.14 gi|452210623|ref|YP_007490737.1| - 6.4e-60 201.5 1.4 7.8e-60 201.2 1.0 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|452210623|ref|YP_007490737.1| - 5.9e-23 80.4 0.0 1.2e-22 79.5 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.12 gi|452210623|ref|YP_007490737.1| - 0.0073 15.4 0.1 0.012 14.7 0.1 1.4 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI Biotin_lipoyl_2 PF13533.1 gi|452210623|ref|YP_007490737.1| - 0.0079 15.8 0.1 0.015 14.9 0.1 1.4 1 0 0 1 1 1 1 Biotin-lipoyl like Ribul_P_3_epim PF00834.14 gi|452210623|ref|YP_007490737.1| - 0.04 13.0 0.1 0.1 11.6 0.0 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family DUF1341 PF07071.6 gi|452210623|ref|YP_007490737.1| - 0.09 12.2 0.3 0.17 11.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1341) Disaggr_repeat PF06848.6 gi|452210625|ref|YP_007490739.1| - 1.9e-263 864.9 38.3 8.8e-96 318.5 2.9 3.9 3 0 0 3 3 3 3 Disaggregatase related repeat TGFb_propeptide PF00688.13 gi|452210625|ref|YP_007490739.1| - 3.3e-11 42.9 0.0 0.22 10.7 0.0 6.1 5 1 0 6 6 6 4 TGF-beta propeptide Kelch_6 PF13964.1 gi|452210625|ref|YP_007490739.1| - 0.13 12.4 4.8 12 6.3 0.0 4.9 4 0 0 4 4 4 0 Kelch motif DUF108 PF01958.13 gi|452210626|ref|YP_007490740.1| - 1.3e-38 131.1 0.2 1.9e-38 130.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 gi|452210626|ref|YP_007490740.1| - 1.6e-18 67.1 0.0 3.3e-18 66.1 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 gi|452210626|ref|YP_007490740.1| - 0.019 15.2 0.1 0.041 14.1 0.0 1.6 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Peptidase_M42 PF05343.9 gi|452210626|ref|YP_007490740.1| - 0.061 12.0 0.0 0.084 11.6 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase NadA PF02445.11 gi|452210628|ref|YP_007490742.1| - 4.1e-122 406.6 3.3 4.6e-122 406.4 2.3 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF1246 PF06849.7 gi|452210628|ref|YP_007490742.1| - 0.041 13.6 0.1 0.44 10.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1246) DUF4448 PF14610.1 gi|452210629|ref|YP_007490743.1| - 0.0077 15.7 0.1 0.04 13.4 0.0 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF4448) UbiA PF01040.13 gi|452210630|ref|YP_007490744.1| - 1.2e-40 139.4 23.2 1.6e-40 138.9 15.2 1.6 1 1 1 2 2 2 1 UbiA prenyltransferase family AdoMet_Synthase PF01941.14 gi|452210631|ref|YP_007490745.1| - 3.7e-163 542.6 0.3 4.2e-163 542.4 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) UPF0278 PF08745.6 gi|452210632|ref|YP_007490746.1| - 2.3e-93 311.1 0.0 2.7e-93 310.9 0.0 1.0 1 0 0 1 1 1 1 UPF0278 family zinc_ribbon_2 PF13240.1 gi|452210634|ref|YP_007490748.1| - 0.002 17.5 4.0 0.098 12.1 0.2 3.1 3 0 0 3 3 3 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|452210634|ref|YP_007490748.1| - 0.0097 15.0 0.8 0.67 9.2 0.3 2.6 2 0 0 2 2 2 1 zinc-ribbon domain zf-RING_5 PF14634.1 gi|452210634|ref|YP_007490748.1| - 0.39 10.4 7.9 3.3 7.5 0.7 3.2 3 0 0 3 3 3 0 zinc-RING finger domain zf-CHY PF05495.7 gi|452210634|ref|YP_007490748.1| - 0.54 10.4 7.2 1.9 8.6 0.2 3.4 2 1 0 3 3 3 0 CHY zinc finger DZR PF12773.2 gi|452210634|ref|YP_007490748.1| - 0.8 9.5 8.9 0.36 10.6 1.9 2.8 1 1 1 2 2 2 0 Double zinc ribbon LIM PF00412.17 gi|452210634|ref|YP_007490748.1| - 1.6 8.8 5.9 5.4 7.1 0.0 3.5 3 1 0 3 3 3 0 LIM domain Nudix_N_2 PF14803.1 gi|452210634|ref|YP_007490748.1| - 2.9 7.6 7.7 12 5.7 0.0 3.1 4 0 0 4 4 4 0 Nudix N-terminal PHD PF00628.24 gi|452210634|ref|YP_007490748.1| - 4.2 7.1 7.1 23 4.7 0.3 3.2 3 0 0 3 3 3 0 PHD-finger zf-dskA_traR PF01258.12 gi|452210634|ref|YP_007490748.1| - 8.6 6.2 12.3 16 5.3 0.1 4.1 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger DS PF01916.12 gi|452210635|ref|YP_007490749.1| - 7.5e-85 284.6 0.0 8.7e-85 284.4 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase OMPdecase PF00215.19 gi|452210636|ref|YP_007490750.1| - 4.2e-44 150.6 0.7 5.3e-44 150.2 0.5 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.12 gi|452210636|ref|YP_007490750.1| - 7e-08 31.9 2.2 0.00035 19.9 0.2 2.9 2 1 1 3 3 3 2 PcrB family PEP_mutase PF13714.1 gi|452210636|ref|YP_007490750.1| - 0.0018 17.5 1.0 0.13 11.4 0.7 2.5 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Ribul_P_3_epim PF00834.14 gi|452210636|ref|YP_007490750.1| - 0.005 15.9 0.1 0.016 14.3 0.1 1.7 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family NanE PF04131.9 gi|452210636|ref|YP_007490750.1| - 0.019 13.9 3.1 3.2 6.6 0.0 3.2 2 2 2 4 4 4 0 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.13 gi|452210636|ref|YP_007490750.1| - 0.081 11.7 0.8 0.18 10.5 0.6 1.6 1 1 0 1 1 1 0 FMN-dependent dehydrogenase CdhD PF03599.11 gi|452210638|ref|YP_007490752.1| - 7.6e-159 528.3 0.3 8.8e-159 528.0 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|452210638|ref|YP_007490752.1| - 5.2e-16 57.9 1.5 5.2e-16 57.9 1.1 2.0 2 0 0 2 2 2 1 Putative Fe-S cluster Peripla_BP_6 PF13458.1 gi|452210638|ref|YP_007490752.1| - 0.00015 21.2 0.2 0.0064 15.8 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein Pterin_bind PF00809.17 gi|452210638|ref|YP_007490752.1| - 0.00061 19.2 0.0 0.0038 16.6 0.0 2.0 1 1 0 1 1 1 1 Pterin binding enzyme DUF2007 PF09413.5 gi|452210638|ref|YP_007490752.1| - 0.014 15.1 0.0 0.058 13.2 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2007) MOFRL PF05161.8 gi|452210638|ref|YP_007490752.1| - 0.037 14.1 0.1 0.072 13.2 0.1 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.11 gi|452210639|ref|YP_007490753.1| - 1.3e-92 310.3 2.1 5e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit Pterin_bind PF00809.17 gi|452210639|ref|YP_007490753.1| - 0.086 12.1 0.3 0.94 8.7 0.2 2.3 1 1 0 1 1 1 0 Pterin binding enzyme CbiA PF01656.18 gi|452210641|ref|YP_007490755.1| - 4.7e-21 75.0 0.5 8.2e-21 74.3 0.3 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|452210641|ref|YP_007490755.1| - 3.7e-05 23.0 0.1 6.1e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Toprim PF01751.17 gi|452210641|ref|YP_007490755.1| - 0.029 14.3 0.0 0.79 9.7 0.0 2.4 2 0 0 2 2 2 0 Toprim domain DUF2365 PF10157.4 gi|452210641|ref|YP_007490755.1| - 0.048 13.5 0.1 0.093 12.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2365) AAA_26 PF13500.1 gi|452210641|ref|YP_007490755.1| - 0.08 12.5 0.1 0.14 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain Toprim_4 PF13662.1 gi|452210641|ref|YP_007490755.1| - 0.1 12.6 0.3 0.32 11.0 0.0 1.9 2 0 0 2 2 2 0 Toprim domain Resolvase PF00239.16 gi|452210641|ref|YP_007490755.1| - 0.12 12.2 0.8 0.41 10.4 0.2 2.0 2 0 0 2 2 2 0 Resolvase, N terminal domain CbiA PF01656.18 gi|452210642|ref|YP_007490756.1| - 6.2e-19 68.1 0.0 8.6e-19 67.7 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|452210642|ref|YP_007490756.1| - 5.2e-09 36.2 0.0 5.6e-08 32.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|452210642|ref|YP_007490756.1| - 7.1e-07 30.0 0.2 2.9e-06 28.0 0.1 2.1 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.12 gi|452210642|ref|YP_007490756.1| - 1.9e-05 24.5 0.2 3.8e-05 23.6 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function DUF87 ArsA_ATPase PF02374.10 gi|452210642|ref|YP_007490756.1| - 3.9e-05 22.8 0.2 9.8e-05 21.5 0.1 1.6 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_18 PF13238.1 gi|452210642|ref|YP_007490756.1| - 0.00055 20.2 0.4 0.0024 18.1 0.3 2.1 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|452210642|ref|YP_007490756.1| - 0.00065 19.1 0.2 0.0085 15.5 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.13 gi|452210642|ref|YP_007490756.1| - 0.00069 18.8 1.9 0.0014 17.8 0.1 2.1 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Miro PF08477.8 gi|452210642|ref|YP_007490756.1| - 0.0012 19.3 0.2 0.0036 17.7 0.1 1.8 2 0 0 2 2 2 1 Miro-like protein APS_kinase PF01583.15 gi|452210642|ref|YP_007490756.1| - 0.0013 18.4 0.1 0.0021 17.7 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase Zeta_toxin PF06414.7 gi|452210642|ref|YP_007490756.1| - 0.0017 17.4 0.0 0.0033 16.5 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin TrkA_N PF02254.13 gi|452210642|ref|YP_007490756.1| - 0.003 17.5 0.1 0.42 10.6 0.0 2.4 2 1 0 2 2 2 1 TrkA-N domain MipZ PF09140.6 gi|452210642|ref|YP_007490756.1| - 0.005 15.9 0.1 0.036 13.1 0.0 2.0 2 0 0 2 2 2 1 ATPase MipZ AAA_25 PF13481.1 gi|452210642|ref|YP_007490756.1| - 0.0075 15.6 0.2 0.018 14.4 0.0 1.7 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.22 gi|452210642|ref|YP_007490756.1| - 0.0079 16.4 0.0 0.011 16.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter KAP_NTPase PF07693.9 gi|452210642|ref|YP_007490756.1| - 0.0087 15.0 0.1 0.011 14.7 0.1 1.2 1 0 0 1 1 1 1 KAP family P-loop domain MobB PF03205.9 gi|452210642|ref|YP_007490756.1| - 0.017 14.8 0.1 0.036 13.7 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B KTI12 PF08433.5 gi|452210642|ref|YP_007490756.1| - 0.024 13.8 0.4 0.063 12.4 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 RNA_helicase PF00910.17 gi|452210642|ref|YP_007490756.1| - 0.046 13.8 0.0 0.13 12.4 0.1 1.7 2 0 0 2 2 1 0 RNA helicase AAA_33 PF13671.1 gi|452210642|ref|YP_007490756.1| - 0.068 13.0 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452210642|ref|YP_007490756.1| - 0.076 12.4 0.1 0.15 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA-like domain MMR_HSR1 PF01926.18 gi|452210642|ref|YP_007490756.1| - 0.076 12.9 1.4 0.47 10.4 1.0 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.1 gi|452210642|ref|YP_007490756.1| - 0.087 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain PRK PF00485.13 gi|452210642|ref|YP_007490756.1| - 0.089 12.3 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family cobW PF02492.14 gi|452210642|ref|YP_007490756.1| - 0.094 12.1 0.2 6.8 6.0 0.0 2.3 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_26 PF13500.1 gi|452210642|ref|YP_007490756.1| - 0.1 12.1 0.9 13 5.3 0.2 2.3 2 0 0 2 2 2 0 AAA domain SKI PF01202.17 gi|452210642|ref|YP_007490756.1| - 0.15 11.9 0.1 0.28 11.0 0.1 1.5 1 0 0 1 1 1 0 Shikimate kinase T2SE PF00437.15 gi|452210642|ref|YP_007490756.1| - 0.17 10.7 0.0 0.26 10.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.1 gi|452210642|ref|YP_007490756.1| - 0.17 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.1 gi|452210642|ref|YP_007490756.1| - 0.19 11.2 2.2 0.21 11.1 0.1 2.0 2 1 1 3 3 2 0 AAA domain TPP_enzyme_C PF02775.16 gi|452210643|ref|YP_007490757.1| - 4.6e-28 97.7 0.3 7.7e-28 96.9 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|452210643|ref|YP_007490757.1| - 2.3e-12 46.9 0.1 1.7e-11 44.0 0.1 2.1 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|452210643|ref|YP_007490757.1| - 1.8e-08 33.6 14.7 2.6e-05 23.5 1.6 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain TPP_enzyme_N PF02776.13 gi|452210643|ref|YP_007490757.1| - 3.6e-05 23.3 0.1 0.00011 21.7 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_10 PF13237.1 gi|452210643|ref|YP_007490757.1| - 0.00038 20.2 14.6 0.00082 19.1 10.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210643|ref|YP_007490757.1| - 0.00062 19.5 13.0 0.00062 19.5 9.0 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452210643|ref|YP_007490757.1| - 0.00083 19.6 14.8 0.00083 19.6 10.2 2.2 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210643|ref|YP_007490757.1| - 0.0029 17.4 3.5 0.0029 17.4 2.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452210643|ref|YP_007490757.1| - 0.05 13.4 20.5 0.23 11.3 3.7 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452210643|ref|YP_007490757.1| - 0.069 13.5 18.4 0.16 12.3 1.8 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain DXP_synthase_N PF13292.1 gi|452210643|ref|YP_007490757.1| - 0.071 12.0 0.1 10 4.9 0.0 2.2 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase Fer4_9 PF13187.1 gi|452210643|ref|YP_007490757.1| - 1.5 9.1 19.4 0.1 12.8 9.7 2.0 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210643|ref|YP_007490757.1| - 3 8.4 19.0 0.22 12.1 2.4 3.1 2 1 1 3 3 2 0 4Fe-4S single cluster domain POR PF01558.13 gi|452210644|ref|YP_007490758.1| - 9.3e-40 136.3 0.5 1.1e-39 136.1 0.3 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Lipoprotein_9 PF03180.9 gi|452210644|ref|YP_007490758.1| - 0.068 12.0 0.1 1.8 7.4 0.0 2.4 2 1 1 3 3 3 0 NLPA lipoprotein DUF552 PF04472.7 gi|452210644|ref|YP_007490758.1| - 0.12 12.3 0.1 10 6.1 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF552) Glycos_transf_4 PF00953.16 gi|452210645|ref|YP_007490759.1| - 8e-28 97.2 16.2 8e-28 97.2 11.2 2.2 3 0 0 3 3 3 1 Glycosyl transferase family 4 Cohesin PF00963.13 gi|452210646|ref|YP_007490760.1| - 5.1e-21 75.0 2.8 6.7e-21 74.6 2.0 1.2 1 0 0 1 1 1 1 Cohesin domain Chordopox_A33R PF05966.7 gi|452210646|ref|YP_007490760.1| - 0.038 12.7 0.1 0.047 12.4 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein Dockerin_1 PF00404.13 gi|452210647|ref|YP_007490761.1| - 4.5e-09 35.5 9.2 0.00048 19.6 0.4 3.6 3 0 0 3 3 3 2 Dockerin type I repeat He_PIG PF05345.7 gi|452210647|ref|YP_007490761.1| - 2.5e-08 33.7 11.3 1e-07 31.8 0.1 4.9 5 0 0 5 5 5 1 Putative Ig domain Cohesin PF00963.13 gi|452210647|ref|YP_007490761.1| - 0.00011 22.0 3.1 0.00011 22.0 2.1 3.1 3 2 0 3 3 3 1 Cohesin domain BiPBP_C PF06832.7 gi|452210647|ref|YP_007490761.1| - 0.034 14.0 0.0 5.1 7.0 0.0 3.3 3 1 1 4 4 4 0 Penicillin-Binding Protein C-terminus Family EF-hand_7 PF13499.1 gi|452210647|ref|YP_007490761.1| - 0.05 13.7 0.0 1.4 9.0 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain pair Big_3_4 PF13754.1 gi|452210647|ref|YP_007490761.1| - 1.4 9.2 19.1 2.2 8.6 0.4 5.6 7 1 0 7 7 7 0 Bacterial Ig-like domain (group 3) EF-hand_1 PF00036.27 gi|452210647|ref|YP_007490761.1| - 2.2 7.7 3.8 7.4 6.1 0.0 2.9 3 0 0 3 3 3 0 EF hand DUF354 PF04007.7 gi|452210649|ref|YP_007490763.1| - 1.1e-26 93.5 0.0 1.3e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.1 gi|452210649|ref|YP_007490763.1| - 0.0028 17.4 0.1 0.009 15.8 0.1 1.8 1 1 0 1 1 1 1 Glycosyl transferase 4-like ArsC PF03960.10 gi|452210649|ref|YP_007490763.1| - 0.0028 17.7 0.1 0.68 10.0 0.0 2.4 2 0 0 2 2 2 2 ArsC family Glyco_transf_28 PF03033.15 gi|452210649|ref|YP_007490763.1| - 0.031 14.0 0.0 0.054 13.2 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Glyco_trans_1_3 PF13528.1 gi|452210649|ref|YP_007490763.1| - 0.12 11.5 0.0 0.38 9.9 0.0 1.9 1 1 0 1 1 1 0 Glycosyl transferase family 1 Glyco_trans_4_4 PF13579.1 gi|452210649|ref|YP_007490763.1| - 0.13 12.4 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Hexapep PF00132.19 gi|452210650|ref|YP_007490764.1| - 1.2e-05 24.5 0.3 2.2e-05 23.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452210650|ref|YP_007490764.1| - 0.00032 20.1 0.4 0.00052 19.5 0.3 1.3 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase FemAB PF02388.11 gi|452210651|ref|YP_007490765.1| - 1.2e-16 60.4 1.8 1.2e-08 34.1 0.0 3.1 1 1 1 3 3 3 3 FemAB family Acetyltransf_6 PF13480.1 gi|452210651|ref|YP_007490765.1| - 4.7e-10 39.5 0.0 8.5e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Frataxin_Cyay PF01491.11 gi|452210651|ref|YP_007490765.1| - 0.027 14.2 0.0 0.056 13.2 0.0 1.4 1 0 0 1 1 1 0 Frataxin-like domain Polysacc_deac_1 PF01522.16 gi|452210652|ref|YP_007490766.1| - 0.054 13.1 0.1 0.091 12.3 0.1 1.4 1 0 0 1 1 1 0 Polysaccharide deacetylase Prefoldin PF02996.12 gi|452210652|ref|YP_007490766.1| - 0.066 12.8 0.3 0.15 11.7 0.2 1.5 1 0 0 1 1 1 0 Prefoldin subunit NUMOD1 PF07453.8 gi|452210652|ref|YP_007490766.1| - 0.09 12.6 0.1 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 NUMOD1 domain Exosortase_EpsH PF09721.5 gi|452210653|ref|YP_007490767.1| - 5.5e-17 61.8 20.2 8.3e-17 61.2 14.0 1.2 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Peptidase_M48 PF01435.13 gi|452210654|ref|YP_007490768.1| - 9.1e-20 71.1 0.0 9.2e-19 67.8 0.0 2.1 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|452210654|ref|YP_007490768.1| - 3.1e-06 26.4 0.6 1.2e-05 24.4 0.0 2.0 2 1 0 2 2 2 1 BlaR1 peptidase M56 DUF1616 PF07760.6 gi|452210655|ref|YP_007490769.1| - 1.3e-62 211.5 1.1 3.2e-62 210.2 0.7 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1616) Big_3_4 PF13754.1 gi|452210655|ref|YP_007490769.1| - 0.0026 18.0 10.5 0.037 14.3 0.1 4.1 4 0 0 4 4 4 2 Bacterial Ig-like domain (group 3) Rib PF08428.5 gi|452210655|ref|YP_007490769.1| - 0.37 10.5 3.4 12 5.6 0.2 2.9 2 0 0 2 2 2 0 Rib/alpha-like repeat PKD PF00801.15 gi|452210657|ref|YP_007490771.1| - 0.0032 17.1 0.4 0.0032 17.1 0.3 2.6 2 1 0 2 2 2 1 PKD domain SASRP1 PF15160.1 gi|452210657|ref|YP_007490771.1| - 0.02 14.1 2.7 0.029 13.6 1.9 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 YjgP_YjgQ PF03739.9 gi|452210657|ref|YP_007490771.1| - 0.098 11.3 0.2 0.21 10.2 0.1 1.5 1 1 1 2 2 2 0 Predicted permease YjgP/YjgQ family DUF2256 PF10013.4 gi|452210659|ref|YP_007490773.1| - 0.011 15.4 0.3 0.023 14.4 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DNA_ligase_ZBD PF03119.11 gi|452210659|ref|YP_007490773.1| - 0.023 14.4 1.2 0.05 13.3 0.2 2.0 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Lar_restr_allev PF14354.1 gi|452210659|ref|YP_007490773.1| - 0.047 13.9 0.2 0.052 13.8 0.1 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.7 gi|452210659|ref|YP_007490773.1| - 0.068 12.5 0.3 0.11 11.8 0.2 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding DUF1272 PF06906.6 gi|452210659|ref|YP_007490773.1| - 0.092 12.6 1.6 0.53 10.1 1.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zf-RING_3 PF14369.1 gi|452210659|ref|YP_007490773.1| - 0.13 12.2 0.1 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 zinc-finger DUF4428 PF14471.1 gi|452210659|ref|YP_007490773.1| - 0.19 11.5 2.6 0.21 11.3 1.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) zinc_ribbon_2 PF13240.1 gi|452210659|ref|YP_007490773.1| - 0.23 10.9 1.3 3.1 7.4 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|452210659|ref|YP_007490773.1| - 0.24 11.1 1.2 0.25 11.0 0.1 1.6 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-HIT PF04438.11 gi|452210659|ref|YP_007490773.1| - 0.31 10.7 4.8 4.2 7.1 0.2 2.1 1 1 1 2 2 2 0 HIT zinc finger PASTA PF03793.14 gi|452210661|ref|YP_007490775.1| - 1.1e-45 153.0 9.2 1.9e-13 49.8 0.2 4.7 4 0 0 4 4 4 4 PASTA domain APG6 PF04111.7 gi|452210661|ref|YP_007490775.1| - 0.033 13.2 0.5 0.045 12.7 0.4 1.2 1 0 0 1 1 1 0 Autophagy protein Apg6 CCDC155 PF14662.1 gi|452210661|ref|YP_007490775.1| - 0.08 12.5 3.7 0.27 10.7 2.3 1.9 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 Reo_sigmaC PF04582.7 gi|452210661|ref|YP_007490775.1| - 0.082 12.0 3.5 0.12 11.4 2.4 1.3 1 0 0 1 1 1 0 Reovirus sigma C capsid protein DUF2450 PF10475.4 gi|452210661|ref|YP_007490775.1| - 0.095 11.5 0.5 0.16 10.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function N-terminal domain (DUF2450) DUF972 PF06156.8 gi|452210661|ref|YP_007490775.1| - 0.66 10.3 4.0 1.5 9.1 1.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF972) Ribosomal_L3 PF00297.17 gi|452210662|ref|YP_007490776.1| - 2.1e-60 204.3 0.0 2.6e-60 204.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.17 gi|452210663|ref|YP_007490777.1| - 6e-48 162.7 0.2 6.8e-48 162.5 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.15 gi|452210664|ref|YP_007490778.1| - 3.1e-13 49.4 2.0 4.5e-13 48.9 1.4 1.3 1 1 0 1 1 1 1 Ribosomal protein L23 ToxN_toxin PF13958.1 gi|452210664|ref|YP_007490778.1| - 0.095 12.3 0.2 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system Ribosomal_S19 PF00203.16 gi|452210665|ref|YP_007490779.1| - 2.6e-25 87.8 0.5 4.1e-25 87.1 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L2_C PF03947.13 gi|452210665|ref|YP_007490779.1| - 1.6e-15 57.0 0.0 3.2e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|452210665|ref|YP_007490779.1| - 2.6e-15 56.1 0.0 6.7e-15 54.8 0.0 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L22 PF00237.14 gi|452210666|ref|YP_007490780.1| - 1.2e-35 121.6 0.2 1.3e-35 121.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Helicase_IV_N PF12462.3 gi|452210666|ref|YP_007490780.1| - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal Ribosomal_S3_C PF00189.15 gi|452210667|ref|YP_007490781.1| - 4.3e-17 62.1 0.1 7.4e-17 61.3 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|452210667|ref|YP_007490781.1| - 1.2e-14 53.5 0.0 3.1e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.24 gi|452210667|ref|YP_007490781.1| - 0.0021 17.6 2.0 0.015 14.9 0.1 2.7 3 0 0 3 3 3 1 KH domain KH_4 PF13083.1 gi|452210667|ref|YP_007490781.1| - 0.027 14.0 0.0 0.085 12.5 0.0 1.8 1 0 0 1 1 1 0 KH domain KH_3 PF13014.1 gi|452210667|ref|YP_007490781.1| - 0.076 12.6 0.1 0.65 9.7 0.0 2.3 2 0 0 2 2 2 0 KH domain DUF2360 PF10152.4 gi|452210667|ref|YP_007490781.1| - 0.34 11.1 7.5 0.5 10.6 5.2 1.5 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein (DUF2360) Ribosomal_L29 PF00831.18 gi|452210668|ref|YP_007490782.1| - 7.3e-19 67.2 0.3 8.2e-19 67.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein MerR-DNA-bind PF09278.6 gi|452210668|ref|YP_007490782.1| - 0.12 12.8 1.8 5.3 7.5 0.0 2.2 2 0 0 2 2 2 0 MerR, DNA binding Med9 PF07544.8 gi|452210668|ref|YP_007490782.1| - 0.24 11.1 2.7 0.83 9.4 0.3 2.0 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 UPF0086 PF01868.11 gi|452210669|ref|YP_007490783.1| - 2.6e-30 103.9 0.1 2.9e-30 103.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.15 gi|452210670|ref|YP_007490784.1| - 9.5e-29 99.2 4.8 1.2e-28 98.9 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L14 PF00238.14 gi|452210671|ref|YP_007490785.1| - 3e-36 123.8 0.6 3.4e-36 123.6 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e KOW PF00467.24 gi|452210672|ref|YP_007490786.1| - 1.1e-05 24.9 0.2 2.4e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 KOW motif Ribosomal_S4e PF00900.15 gi|452210673|ref|YP_007490787.1| - 1.5e-26 91.8 0.6 2.8e-26 90.9 0.4 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|452210673|ref|YP_007490787.1| - 9.8e-11 41.3 3.2 2e-10 40.3 2.2 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain KOW PF00467.24 gi|452210673|ref|YP_007490787.1| - 9.7e-05 21.9 1.9 0.00018 21.1 0.1 2.4 2 0 0 2 2 2 1 KOW motif S4 PF01479.20 gi|452210673|ref|YP_007490787.1| - 0.00044 19.6 1.7 0.00058 19.2 0.1 2.1 3 0 0 3 3 3 1 S4 domain Enterotoxin_b PF01376.13 gi|452210673|ref|YP_007490787.1| - 0.16 11.8 0.3 0.41 10.5 0.0 1.8 2 0 0 2 2 2 0 Heat-labile enterotoxin beta chain Ribosomal_L5_C PF00673.16 gi|452210674|ref|YP_007490788.1| - 4.8e-26 90.3 0.0 6.8e-26 89.8 0.0 1.2 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|452210674|ref|YP_007490788.1| - 8.1e-13 47.9 0.1 1.5e-12 47.0 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.16 gi|452210675|ref|YP_007490789.1| - 7.1e-20 70.1 3.4 8e-20 69.9 2.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.9 gi|452210675|ref|YP_007490789.1| - 0.0004 19.7 1.6 0.0005 19.4 1.1 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.1 gi|452210675|ref|YP_007490789.1| - 0.00054 19.6 0.3 0.0006 19.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf-UBR PF02207.15 gi|452210675|ref|YP_007490789.1| - 0.027 14.1 0.4 0.031 14.0 0.2 1.1 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) DUF2318 PF10080.4 gi|452210675|ref|YP_007490789.1| - 0.027 14.2 0.4 0.027 14.2 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF1451 PF07295.6 gi|452210675|ref|YP_007490789.1| - 0.037 13.8 0.3 0.04 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) Ribosomal_L37ae PF01780.14 gi|452210675|ref|YP_007490789.1| - 0.039 13.8 0.5 0.046 13.5 0.3 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family A2L_zn_ribbon PF08792.5 gi|452210675|ref|YP_007490789.1| - 0.07 12.6 3.0 0.11 12.0 2.1 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain Rsm1 PF08600.5 gi|452210675|ref|YP_007490789.1| - 0.88 9.4 4.9 7.2 6.5 0.3 2.0 1 1 1 2 2 2 0 Rsm1-like zf-C2HC_2 PF13913.1 gi|452210675|ref|YP_007490789.1| - 4.8 6.9 8.5 15 5.3 0.2 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF2757 PF10955.3 gi|452210675|ref|YP_007490789.1| - 7.3 6.8 6.6 4.6 7.5 0.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2757) Ribosomal_S8 PF00410.14 gi|452210676|ref|YP_007490790.1| - 1.5e-24 86.2 0.0 2.1e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.18 gi|452210677|ref|YP_007490791.1| - 2.1e-30 105.0 6.6 1e-16 61.1 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.16 gi|452210677|ref|YP_007490791.1| - 0.015 15.1 0.8 7.6 6.4 0.1 2.9 4 0 0 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.13 gi|452210678|ref|YP_007490792.1| - 3.1e-38 130.2 0.0 3.7e-38 129.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.15 gi|452210679|ref|YP_007490793.1| - 6e-59 198.0 7.6 6.8e-59 197.8 5.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L18p PF00861.17 gi|452210680|ref|YP_007490794.1| - 7.3e-27 93.9 0.0 8.8e-27 93.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_S5 PF00333.15 gi|452210681|ref|YP_007490795.1| - 8.6e-28 95.8 0.4 1.8e-27 94.8 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|452210681|ref|YP_007490795.1| - 6.1e-25 86.2 0.5 9.9e-25 85.6 0.4 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.15 gi|452210682|ref|YP_007490796.1| - 8.8e-13 47.6 0.2 1.9e-12 46.5 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|452210683|ref|YP_007490797.1| - 2.1e-24 86.3 0.7 2.5e-24 86.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 SecY PF00344.15 gi|452210684|ref|YP_007490798.1| - 8.8e-97 324.1 27.2 1.1e-96 323.8 18.8 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|452210684|ref|YP_007490798.1| - 3.9e-11 42.2 0.9 1.4e-10 40.5 0.6 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p Syndecan PF01034.15 gi|452210684|ref|YP_007490798.1| - 8 6.1 9.4 6.5 6.4 1.5 3.4 3 0 0 3 3 3 0 Syndecan domain ADK PF00406.17 gi|452210685|ref|YP_007490799.1| - 4e-61 205.3 0.0 4.8e-61 205.0 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase ADK_lid PF05191.9 gi|452210685|ref|YP_007490799.1| - 2.9e-14 52.4 2.8 5e-14 51.6 2.0 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_17 PF13207.1 gi|452210685|ref|YP_007490799.1| - 5e-10 40.2 0.1 9e-10 39.4 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452210685|ref|YP_007490799.1| - 5.4e-05 23.4 0.9 0.00097 19.4 0.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|452210685|ref|YP_007490799.1| - 0.00014 21.7 0.0 0.00025 20.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain TF_Zn_Ribbon PF08271.7 gi|452210685|ref|YP_007490799.1| - 0.085 12.1 0.9 0.16 11.3 0.6 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding AAA PF00004.24 gi|452210685|ref|YP_007490799.1| - 0.088 13.0 0.1 0.22 11.7 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.12 gi|452210685|ref|YP_007490799.1| - 0.089 12.1 0.1 14 4.9 0.0 2.7 3 0 0 3 3 3 0 Thymidylate kinase Mg_chelatase PF01078.16 gi|452210685|ref|YP_007490799.1| - 0.094 11.8 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AIRC PF00731.15 gi|452210686|ref|YP_007490800.1| - 1.7e-56 189.7 1.8 2e-56 189.4 1.2 1.1 1 0 0 1 1 1 1 AIR carboxylase TroA PF01297.12 gi|452210686|ref|YP_007490800.1| - 0.041 13.1 0.3 0.076 12.2 0.0 1.5 2 0 0 2 2 2 0 Periplasmic solute binding protein family MarR_2 PF12802.2 gi|452210688|ref|YP_007490802.1| - 1.4e-07 31.0 0.1 2.3e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|452210688|ref|YP_007490802.1| - 2.2e-06 27.2 0.1 3.5e-06 26.6 0.1 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|452210688|ref|YP_007490802.1| - 5.7e-06 25.9 0.0 8.6e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|452210688|ref|YP_007490802.1| - 9e-06 24.9 0.1 1.4e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.1 gi|452210688|ref|YP_007490802.1| - 1.1e-05 25.3 0.1 0.0002 21.3 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|452210688|ref|YP_007490802.1| - 0.00012 22.2 0.1 0.00023 21.4 0.0 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|452210688|ref|YP_007490802.1| - 0.00016 21.4 0.1 0.00021 21.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|452210688|ref|YP_007490802.1| - 0.0006 19.4 0.4 0.0012 18.3 0.2 1.6 2 0 0 2 2 2 1 HTH domain HTH_34 PF13601.1 gi|452210688|ref|YP_007490802.1| - 0.00069 19.5 0.2 0.0013 18.7 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|452210688|ref|YP_007490802.1| - 0.0007 19.3 0.3 0.0015 18.3 0.2 1.7 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain DUF2250 PF10007.4 gi|452210688|ref|YP_007490802.1| - 0.00079 19.2 0.1 0.00098 18.9 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) Rrf2 PF02082.15 gi|452210688|ref|YP_007490802.1| - 0.00083 19.4 0.1 0.0014 18.7 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator Phage_rep_org_N PF09681.5 gi|452210688|ref|YP_007490802.1| - 0.0018 17.8 0.0 0.0026 17.3 0.0 1.4 1 1 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) TFIIE_alpha PF02002.12 gi|452210688|ref|YP_007490802.1| - 0.0029 17.0 0.3 0.0035 16.8 0.2 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_5 PF01022.15 gi|452210688|ref|YP_007490802.1| - 0.0052 16.4 0.1 0.018 14.6 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family FeoC PF09012.5 gi|452210688|ref|YP_007490802.1| - 0.0061 16.2 0.1 0.01 15.5 0.0 1.4 1 1 0 1 1 1 1 FeoC like transcriptional regulator B-block_TFIIIC PF04182.7 gi|452210688|ref|YP_007490802.1| - 0.0088 15.8 0.0 0.0098 15.7 0.0 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HxlR PF01638.12 gi|452210688|ref|YP_007490802.1| - 0.01 15.4 0.2 0.013 15.1 0.1 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Rio2_N PF09202.6 gi|452210688|ref|YP_007490802.1| - 0.018 15.0 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Rio2, N-terminal HTH_IclR PF09339.5 gi|452210688|ref|YP_007490802.1| - 0.022 14.3 0.0 0.069 12.7 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain GntR PF00392.16 gi|452210688|ref|YP_007490802.1| - 0.027 13.9 0.1 0.043 13.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.11 gi|452210688|ref|YP_007490802.1| - 0.043 13.3 0.0 0.071 12.6 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain RepL PF05732.6 gi|452210688|ref|YP_007490802.1| - 0.051 12.7 0.2 0.15 11.2 0.0 1.8 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) LOH1CR12 PF10158.4 gi|452210688|ref|YP_007490802.1| - 0.052 13.3 0.1 0.062 13.0 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor protein FliG_C PF01706.11 gi|452210688|ref|YP_007490802.1| - 0.066 13.1 0.6 0.3 11.0 0.2 1.8 1 1 1 2 2 2 0 FliG C-terminal domain RPA_C PF08784.6 gi|452210688|ref|YP_007490802.1| - 0.071 13.5 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal HTH_28 PF13518.1 gi|452210688|ref|YP_007490802.1| - 0.079 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.1 gi|452210688|ref|YP_007490802.1| - 0.1 12.4 0.1 0.15 11.9 0.1 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Crp PF00325.15 gi|452210688|ref|YP_007490802.1| - 0.12 11.8 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_Tnp_Tc3_1 PF11427.3 gi|452210688|ref|YP_007490802.1| - 0.21 11.2 0.6 1.3 8.7 0.1 2.0 2 0 0 2 2 2 0 Tc3 transposase DUF106 PF01956.11 gi|452210689|ref|YP_007490803.1| - 8.9e-46 155.4 8.1 1.1e-45 155.1 5.6 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF106 60KD_IMP PF02096.15 gi|452210689|ref|YP_007490803.1| - 0.00079 19.1 10.0 0.0016 18.0 6.9 1.5 1 1 0 1 1 1 1 60Kd inner membrane protein Cytidylate_kin2 PF13189.1 gi|452210690|ref|YP_007490804.1| - 1e-22 80.9 1.7 4.5e-22 78.8 1.2 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|452210690|ref|YP_007490804.1| - 6.2e-13 49.1 0.2 8.9e-13 48.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452210690|ref|YP_007490804.1| - 8.1e-12 46.0 0.7 2.8e-11 44.2 0.1 1.8 1 1 1 2 2 2 1 AAA domain SKI PF01202.17 gi|452210690|ref|YP_007490804.1| - 0.00014 21.8 0.9 0.00048 20.0 0.7 1.7 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.1 gi|452210690|ref|YP_007490804.1| - 0.00036 20.4 0.0 0.0014 18.4 0.0 1.9 1 1 0 1 1 1 1 AAA domain ADK PF00406.17 gi|452210690|ref|YP_007490804.1| - 0.00059 19.7 0.1 0.0013 18.5 0.0 1.6 2 0 0 2 2 2 1 Adenylate kinase dNK PF01712.14 gi|452210690|ref|YP_007490804.1| - 0.067 13.0 0.8 0.11 12.4 0.6 1.5 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA_28 PF13521.1 gi|452210690|ref|YP_007490804.1| - 0.077 12.9 0.0 0.16 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain RHH_1 PF01402.16 gi|452210690|ref|YP_007490804.1| - 0.36 10.8 4.5 4.9 7.2 0.0 3.0 4 0 0 4 4 4 0 Ribbon-helix-helix protein, copG family DKCLD PF08068.7 gi|452210691|ref|YP_007490805.1| - 4.3e-24 84.1 0.2 9.6e-24 83.0 0.1 1.6 1 0 0 1 1 1 1 DKCLD (NUC011) domain TruB_N PF01509.13 gi|452210691|ref|YP_007490805.1| - 2e-21 76.7 1.8 3.2e-17 63.0 1.2 3.5 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.15 gi|452210691|ref|YP_007490805.1| - 8.6e-17 60.6 0.0 1.9e-16 59.5 0.0 1.6 1 0 0 1 1 1 1 PUA domain Ribosomal_S13 PF00416.17 gi|452210693|ref|YP_007490807.1| - 1e-29 103.0 0.0 1.3e-29 102.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH PF00633.18 gi|452210693|ref|YP_007490807.1| - 0.025 14.2 0.3 0.067 12.9 0.2 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif S4 PF01479.20 gi|452210694|ref|YP_007490808.1| - 1.7e-14 52.9 0.4 9.1e-14 50.6 0.0 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.14 gi|452210694|ref|YP_007490808.1| - 0.0067 16.7 1.4 0.017 15.4 0.2 2.1 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S11 PF00411.14 gi|452210695|ref|YP_007490809.1| - 1e-42 144.7 1.1 1.2e-42 144.5 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.5 gi|452210695|ref|YP_007490809.1| - 0.09 12.2 0.4 0.15 11.5 0.2 1.4 1 1 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) RNA_pol_A_bac PF01000.21 gi|452210696|ref|YP_007490810.1| - 6.2e-28 97.2 0.0 2.2e-27 95.4 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|452210696|ref|YP_007490810.1| - 6.7e-10 37.9 0.0 8.4e-10 37.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.2 gi|452210696|ref|YP_007490810.1| - 1.7e-06 28.2 10.7 1.7e-06 28.2 7.4 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452210696|ref|YP_007490810.1| - 2.1e-06 27.8 10.5 2.1e-06 27.8 7.2 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452210696|ref|YP_007490810.1| - 4.9e-05 22.7 21.1 0.003 17.0 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452210696|ref|YP_007490810.1| - 5.2e-05 23.1 11.7 0.097 12.7 5.2 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210696|ref|YP_007490810.1| - 5.4e-05 22.9 10.6 5.4e-05 22.9 7.4 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452210696|ref|YP_007490810.1| - 0.0016 18.2 5.2 0.0016 18.2 3.6 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452210696|ref|YP_007490810.1| - 0.0019 18.8 15.2 0.024 15.3 1.7 3.1 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|452210696|ref|YP_007490810.1| - 0.18 12.1 18.7 0.56 10.6 2.8 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452210696|ref|YP_007490810.1| - 3 7.7 22.6 0.073 12.9 9.4 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210696|ref|YP_007490810.1| - 3.3 7.8 24.1 0.46 10.5 3.0 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Hexapep PF00132.19 gi|452210698|ref|YP_007490812.1| - 2.7e-21 74.0 17.2 3.6e-10 38.8 1.6 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452210698|ref|YP_007490812.1| - 3.1e-08 33.0 14.7 5.3e-06 25.8 1.9 3.4 2 1 1 3 3 3 3 Hexapeptide repeat of succinyl-transferase MIT PF04212.13 gi|452210698|ref|YP_007490812.1| - 0.016 15.0 0.7 0.026 14.4 0.5 1.3 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain Na_H_Exchanger PF00999.16 gi|452210699|ref|YP_007490813.1| - 0.0039 15.7 0.2 0.0039 15.7 0.1 1.3 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family DUF1422 PF07226.6 gi|452210699|ref|YP_007490813.1| - 0.021 14.5 2.4 0.27 10.9 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1422) DUF912 PF06024.7 gi|452210699|ref|YP_007490813.1| - 0.34 10.9 4.0 2.2 8.3 0.1 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) cobW PF02492.14 gi|452210700|ref|YP_007490814.1| - 5.1e-37 127.0 1.4 6.2e-37 126.7 1.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|452210700|ref|YP_007490814.1| - 1.8e-06 26.9 1.9 0.0058 15.4 0.4 2.1 2 0 0 2 2 2 2 ArgK protein MobB PF03205.9 gi|452210700|ref|YP_007490814.1| - 1.9e-05 24.4 0.0 3.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|452210700|ref|YP_007490814.1| - 0.00099 19.1 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Arch_ATPase PF01637.13 gi|452210700|ref|YP_007490814.1| - 0.0014 18.3 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase CbiA PF01656.18 gi|452210700|ref|YP_007490814.1| - 0.003 16.9 2.0 0.0081 15.5 1.4 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.10 gi|452210700|ref|YP_007490814.1| - 0.0042 16.8 0.1 0.0093 15.6 0.1 1.8 1 1 0 1 1 1 1 NTPase SRP54 PF00448.17 gi|452210700|ref|YP_007490814.1| - 0.0052 16.2 0.0 0.0081 15.6 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.12 gi|452210700|ref|YP_007490814.1| - 0.0057 16.2 0.1 0.012 15.2 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_18 PF13238.1 gi|452210700|ref|YP_007490814.1| - 0.007 16.6 0.1 0.016 15.5 0.1 1.7 1 1 0 1 1 1 1 AAA domain Pox_A32 PF04665.7 gi|452210700|ref|YP_007490814.1| - 0.011 15.0 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_17 PF13207.1 gi|452210700|ref|YP_007490814.1| - 0.011 16.5 0.2 0.024 15.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|452210700|ref|YP_007490814.1| - 0.013 15.6 0.0 0.029 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|452210700|ref|YP_007490814.1| - 0.015 15.1 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|452210700|ref|YP_007490814.1| - 0.018 13.9 0.0 0.032 13.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NB-ARC PF00931.17 gi|452210700|ref|YP_007490814.1| - 0.021 13.7 0.1 0.032 13.0 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain KAP_NTPase PF07693.9 gi|452210700|ref|YP_007490814.1| - 0.024 13.6 0.0 0.024 13.6 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_19 PF13245.1 gi|452210700|ref|YP_007490814.1| - 0.027 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain AAA_33 PF13671.1 gi|452210700|ref|YP_007490814.1| - 0.05 13.4 0.0 0.082 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|452210700|ref|YP_007490814.1| - 0.095 12.2 0.1 0.29 10.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|452210700|ref|YP_007490814.1| - 0.096 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Miro PF08477.8 gi|452210700|ref|YP_007490814.1| - 0.098 13.1 0.0 0.25 11.8 0.0 1.8 2 0 0 2 2 2 0 Miro-like protein UPF0079 PF02367.12 gi|452210700|ref|YP_007490814.1| - 0.11 12.1 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 TrwB_AAD_bind PF10412.4 gi|452210700|ref|YP_007490814.1| - 0.13 10.8 0.0 0.19 10.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain HupF_HypC PF01455.13 gi|452210701|ref|YP_007490815.1| - 0.0021 17.9 0.1 0.0029 17.5 0.0 1.3 1 0 0 1 1 1 1 HupF/HypC family DDE_3 PF13358.1 gi|452210702|ref|YP_007490816.1| - 4e-19 68.8 0.0 5.7e-19 68.2 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Cast PF10174.4 gi|452210703|ref|YP_007490817.1| - 0.0073 14.4 1.9 0.008 14.2 1.3 1.0 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone DUF3417 PF11897.3 gi|452210703|ref|YP_007490817.1| - 0.011 15.7 0.6 0.014 15.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3417) Oxidored_q6 PF01058.17 gi|452210705|ref|YP_007490819.1| - 4.4e-33 113.6 1.5 1.2e-32 112.2 0.0 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.1 gi|452210705|ref|YP_007490819.1| - 3.2e-29 100.7 7.2 2.5e-28 97.9 1.4 3.1 3 0 0 3 3 3 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.4 gi|452210705|ref|YP_007490819.1| - 0.048 13.6 1.0 0.048 13.6 0.7 3.1 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.14 gi|452210706|ref|YP_007490820.1| - 2.7e-71 240.8 0.0 5e-44 150.9 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Cytochrom_B_N PF00033.14 gi|452210707|ref|YP_007490821.1| - 0.00012 21.4 21.3 0.00055 19.3 14.8 1.9 1 1 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.1 gi|452210707|ref|YP_007490821.1| - 0.0016 18.5 22.1 0.42 10.7 1.7 3.3 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.15 gi|452210707|ref|YP_007490821.1| - 0.0078 15.6 22.0 0.099 12.0 15.3 2.1 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4134 PF13572.1 gi|452210707|ref|YP_007490821.1| - 0.063 13.3 0.2 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4134) HycI PF01750.13 gi|452210708|ref|YP_007490822.1| - 1.6e-30 105.3 1.6 1.8e-30 105.1 1.1 1.0 1 0 0 1 1 1 1 Hydrogenase maturation protease PG_binding_1 PF01471.13 gi|452210710|ref|YP_007490824.1| - 5.6e-12 45.4 0.0 8.9e-12 44.8 0.0 1.3 1 0 0 1 1 1 1 Putative peptidoglycan binding domain PG_binding_3 PF09374.5 gi|452210710|ref|YP_007490824.1| - 0.011 15.7 0.0 0.094 12.7 0.0 2.1 1 1 1 2 2 2 0 Predicted Peptidoglycan domain NiFe_hyd_SSU_C PF14720.1 gi|452210711|ref|YP_007490825.1| - 5.6e-29 100.0 3.6 9.4e-29 99.2 2.5 1.4 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.17 gi|452210711|ref|YP_007490825.1| - 1.4e-23 82.9 0.0 2e-23 82.4 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit TAT_signal PF10518.4 gi|452210711|ref|YP_007490825.1| - 0.48 10.5 0.1 0.48 10.5 0.1 2.6 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.14 gi|452210712|ref|YP_007490826.1| - 1.1e-74 252.0 0.1 8.8e-48 163.3 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Cytochrom_B_N PF00033.14 gi|452210713|ref|YP_007490827.1| - 1.3e-09 37.6 21.7 1e-08 34.7 15.0 1.9 1 1 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB Ni_hydr_CYTB PF01292.15 gi|452210713|ref|YP_007490827.1| - 2.4e-05 23.8 20.0 0.00013 21.3 13.9 1.9 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 PsbN PF02468.10 gi|452210713|ref|YP_007490827.1| - 0.0064 16.0 0.2 0.0064 16.0 0.1 2.4 2 0 0 2 2 2 1 Photosystem II reaction centre N protein (psbN) DUF4405 PF14358.1 gi|452210713|ref|YP_007490827.1| - 0.023 14.8 23.5 0.24 11.5 2.8 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4405) MEDS PF14417.1 gi|452210714|ref|YP_007490828.1| - 5.3e-39 133.2 0.1 8.9e-39 132.5 0.1 1.4 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_9 PF13426.1 gi|452210714|ref|YP_007490828.1| - 4.5e-17 62.3 0.1 1.9e-15 57.1 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS PF00989.19 gi|452210714|ref|YP_007490828.1| - 3.2e-14 52.6 0.0 2.1e-12 46.8 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.1 gi|452210714|ref|YP_007490828.1| - 1.1e-10 40.9 0.0 1.2e-06 28.1 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|452210714|ref|YP_007490828.1| - 1.4e-09 37.9 0.0 1.8e-08 34.3 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.2 gi|452210714|ref|YP_007490828.1| - 0.07 13.1 0.0 5.6 7.0 0.0 2.8 2 1 0 2 2 2 0 PAS fold PAS_3 PF08447.6 gi|452210714|ref|YP_007490828.1| - 0.074 13.1 0.0 0.2 11.7 0.0 1.8 1 0 0 1 1 1 0 PAS fold CGI-121 PF08617.5 gi|452210715|ref|YP_007490829.1| - 7.9e-26 90.6 0.0 9.3e-26 90.4 0.0 1.0 1 0 0 1 1 1 1 Kinase binding protein CGI-121 GATase PF00117.23 gi|452210716|ref|YP_007490830.1| - 5.3e-18 65.1 0.0 7.2e-18 64.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|452210716|ref|YP_007490830.1| - 6.3e-05 22.5 0.0 0.0015 18.0 0.0 2.1 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.9 gi|452210716|ref|YP_007490830.1| - 0.0022 17.5 0.0 0.0047 16.5 0.0 1.6 1 1 1 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain FBPase_glpX PF03320.8 gi|452210717|ref|YP_007490831.1| - 8.2e-116 385.9 5.0 9.4e-116 385.7 3.5 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Radical_SAM PF04055.16 gi|452210718|ref|YP_007490832.1| - 1.1e-22 80.9 0.1 1.3e-21 77.5 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.15 gi|452210718|ref|YP_007490832.1| - 8e-18 64.0 0.1 1.9e-17 62.8 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 gi|452210718|ref|YP_007490832.1| - 0.00034 20.3 0.0 0.00066 19.4 0.0 1.5 1 0 0 1 1 1 1 TRAM domain RE_AlwI PF09491.5 gi|452210718|ref|YP_007490832.1| - 0.048 12.1 0.1 0.21 9.9 0.4 1.7 2 0 0 2 2 2 0 AlwI restriction endonuclease UPF0449 PF15136.1 gi|452210718|ref|YP_007490832.1| - 0.089 13.0 0.1 24 5.1 0.0 2.8 3 0 0 3 3 3 0 Uncharacterised protein family UPF0449 Gram_pos_anchor PF00746.16 gi|452210719|ref|YP_007490833.1| - 0.17 11.7 0.6 0.28 11.0 0.4 1.3 1 0 0 1 1 1 0 Gram positive anchor DIM PF08194.7 gi|452210719|ref|YP_007490833.1| - 2.6 8.0 6.8 3.9 7.4 0.3 2.3 2 0 0 2 2 2 0 DIM protein Rubrerythrin PF02915.12 gi|452210720|ref|YP_007490834.1| - 2.8e-25 89.2 2.6 3.4e-25 88.9 1.8 1.1 1 0 0 1 1 1 1 Rubrerythrin Rubredoxin PF00301.15 gi|452210720|ref|YP_007490834.1| - 0.0034 17.2 4.5 0.078 12.8 3.2 2.4 1 1 0 1 1 1 1 Rubredoxin DZR PF12773.2 gi|452210720|ref|YP_007490834.1| - 0.011 15.4 0.3 0.018 14.8 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Ferritin PF00210.19 gi|452210720|ref|YP_007490834.1| - 0.02 14.6 1.8 0.026 14.2 1.3 1.4 1 1 0 1 1 1 0 Ferritin-like domain zf-RING_5 PF14634.1 gi|452210720|ref|YP_007490834.1| - 0.23 11.2 0.9 0.36 10.5 0.6 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-ribbon_3 PF13248.1 gi|452210720|ref|YP_007490834.1| - 0.23 10.7 1.4 6.6 6.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|452210720|ref|YP_007490834.1| - 0.28 10.9 2.3 0.51 10.1 1.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RRN7 PF11781.3 gi|452210720|ref|YP_007490834.1| - 0.37 10.3 5.0 1 8.9 0.2 2.3 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 Abi PF02517.11 gi|452210722|ref|YP_007490836.1| - 2.4e-12 46.8 18.4 9.5e-12 44.8 12.8 2.2 1 1 0 1 1 1 1 CAAX protease self-immunity Hat1_N PF10394.4 gi|452210723|ref|YP_007490837.1| - 0.011 15.8 0.8 0.012 15.6 0.6 1.0 1 0 0 1 1 1 0 Histone acetyl transferase HAT1 N-terminus Bromodomain PF00439.20 gi|452210723|ref|YP_007490837.1| - 0.049 13.5 0.1 0.095 12.6 0.0 1.4 1 0 0 1 1 1 0 Bromodomain DUF3633 PF12315.3 gi|452210723|ref|YP_007490837.1| - 0.2 10.9 0.8 0.27 10.5 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3633) Vma12 PF11712.3 gi|452210723|ref|YP_007490837.1| - 0.25 11.0 1.1 0.33 10.6 0.8 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Metallophos PF00149.23 gi|452210724|ref|YP_007490838.1| - 2.5e-15 56.3 0.0 4.8e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452210724|ref|YP_007490838.1| - 2.5e-13 50.1 0.0 3.9e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Bac_luciferase PF00296.15 gi|452210726|ref|YP_007490840.1| - 3.9e-66 223.2 0.0 4.3e-66 223.1 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase TPD PF14811.1 gi|452210727|ref|YP_007490841.1| - 1.2e-48 164.1 0.2 1.8e-48 163.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif N6_Mtase PF02384.11 gi|452210730|ref|YP_007490844.1| - 3.1e-116 387.8 0.0 4.1e-116 387.4 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|452210730|ref|YP_007490844.1| - 8.1e-29 100.7 0.0 1.9e-28 99.6 0.0 1.7 1 0 0 1 1 1 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|452210730|ref|YP_007490844.1| - 1.3e-08 34.8 0.0 2.5e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452210730|ref|YP_007490844.1| - 4.5e-06 26.3 0.0 9.4e-06 25.3 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|452210730|ref|YP_007490844.1| - 0.00014 21.2 0.0 0.0003 20.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.10 gi|452210730|ref|YP_007490844.1| - 0.013 14.8 0.0 0.1 12.0 0.0 2.1 1 1 0 1 1 1 0 Conserved hypothetical protein 95 HTH_Crp_2 PF13545.1 gi|452210731|ref|YP_007490845.1| - 0.056 13.2 0.0 0.14 12.0 0.0 1.7 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain DUF2500 PF10694.4 gi|452210731|ref|YP_007490845.1| - 0.11 12.5 0.4 0.17 11.8 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2500) Virulence_RhuM PF13310.1 gi|452210732|ref|YP_007490846.1| - 1.3e-120 401.2 8.4 1.7e-120 400.9 5.8 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family Mrr_N PF14338.1 gi|452210732|ref|YP_007490846.1| - 0.00061 19.8 0.4 0.11 12.6 0.1 2.8 2 0 0 2 2 2 1 Mrr N-terminal domain Phage_pRha PF09669.5 gi|452210732|ref|YP_007490846.1| - 0.01 16.1 0.1 0.15 12.4 0.0 2.6 2 0 0 2 2 2 0 Phage regulatory protein Rha (Phage_pRha) HTH_38 PF13936.1 gi|452210732|ref|YP_007490846.1| - 0.014 14.9 0.1 0.053 13.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|452210732|ref|YP_007490846.1| - 0.03 13.7 0.0 0.07 12.5 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|452210732|ref|YP_007490846.1| - 0.047 13.3 0.0 0.096 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3387 PF11867.3 gi|452210733|ref|YP_007490847.1| - 4.6e-133 443.3 16.1 8.2e-133 442.5 11.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) HSDR_N PF04313.9 gi|452210733|ref|YP_007490847.1| - 3.8e-50 170.3 0.0 3.8e-50 170.3 0.0 3.3 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|452210733|ref|YP_007490847.1| - 5.2e-15 55.7 0.8 2.2e-13 50.4 0.0 3.1 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit Glyco_hydro_44 PF12891.2 gi|452210733|ref|YP_007490847.1| - 8.5e-05 22.1 0.3 0.00027 20.5 0.0 1.9 2 0 0 2 2 2 1 Glycoside hydrolase family 44 DEAD PF00270.24 gi|452210733|ref|YP_007490847.1| - 0.003 17.0 2.7 0.0069 15.8 0.0 2.7 3 1 0 3 3 3 1 DEAD/DEAH box helicase PDDEXK_4 PF14281.1 gi|452210733|ref|YP_007490847.1| - 0.0034 17.2 0.0 0.0081 16.0 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Chordopox_G3 PF06129.7 gi|452210733|ref|YP_007490847.1| - 0.045 13.9 0.3 0.37 10.9 0.0 2.5 2 0 0 2 2 2 0 Chordopoxvirus G3 protein DUF2285 PF10074.4 gi|452210733|ref|YP_007490847.1| - 0.05 13.9 0.4 6.9 7.0 0.0 2.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2285) ISAV_HA PF06215.6 gi|452210733|ref|YP_007490847.1| - 0.17 10.1 0.2 0.67 8.2 0.0 2.0 3 0 0 3 3 3 0 Infectious salmon anaemia virus haemagglutinin Pribosyltran_N PF13793.1 gi|452210735|ref|YP_007490849.1| - 1.2e-26 92.6 0.0 3.4e-25 88.0 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|452210735|ref|YP_007490849.1| - 3.9e-13 49.2 0.1 8.8e-13 48.0 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|452210735|ref|YP_007490849.1| - 9.6e-08 31.9 0.6 1.5e-07 31.3 0.4 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|452210735|ref|YP_007490849.1| - 9.1e-06 25.0 0.1 1.6e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|452210735|ref|YP_007490849.1| - 0.00036 19.8 0.2 0.0013 18.0 0.1 1.8 1 1 1 2 2 2 1 Phosphoribosyl transferase MoaC PF01967.16 gi|452210736|ref|YP_007490850.1| - 1.2e-49 167.4 2.1 1.4e-49 167.2 1.5 1.0 1 0 0 1 1 1 1 MoaC family DUF3750 PF12570.3 gi|452210737|ref|YP_007490851.1| - 0.036 14.3 0.0 0.038 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3750) Peptidase_C80 PF11713.3 gi|452210737|ref|YP_007490851.1| - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase C80 family DUF3117 PF11314.3 gi|452210737|ref|YP_007490851.1| - 0.14 11.7 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3117) Carb_kinase PF01256.12 gi|452210738|ref|YP_007490852.1| - 1.1e-51 175.5 0.2 1.5e-51 175.0 0.2 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|452210738|ref|YP_007490852.1| - 2e-41 141.4 0.1 6.4e-40 136.5 0.0 2.1 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.10 gi|452210738|ref|YP_007490852.1| - 2e-11 43.5 0.1 4.9e-10 39.0 0.0 2.2 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Glyco_trans_1_4 PF13692.1 gi|452210738|ref|YP_007490852.1| - 0.00029 20.9 0.0 0.96 9.6 0.0 2.7 2 0 0 2 2 2 2 Glycosyl transferases group 1 TrkA_N PF02254.13 gi|452210740|ref|YP_007490854.1| - 5.1e-24 84.4 0.1 1.4e-23 83.0 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain DHH PF01368.15 gi|452210740|ref|YP_007490854.1| - 1.4e-16 60.4 1.1 2.8e-15 56.2 0.1 2.3 2 0 0 2 2 2 1 DHH family DHHA1 PF02272.14 gi|452210740|ref|YP_007490854.1| - 3.6e-12 45.8 0.1 9.6e-12 44.4 0.1 1.8 1 0 0 1 1 1 1 DHHA1 domain Methyltransf_31 PF13847.1 gi|452210740|ref|YP_007490854.1| - 0.00013 21.5 0.1 0.00026 20.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NAD_Gly3P_dh_N PF01210.18 gi|452210740|ref|YP_007490854.1| - 0.00035 20.3 0.0 0.0007 19.3 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|452210740|ref|YP_007490854.1| - 0.0006 19.2 0.0 0.0012 18.3 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|452210740|ref|YP_007490854.1| - 0.00079 19.8 0.0 0.0021 18.4 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.1 gi|452210740|ref|YP_007490854.1| - 0.0028 17.7 0.0 0.0058 16.6 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|452210740|ref|YP_007490854.1| - 0.0033 16.8 0.0 0.0063 15.9 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Saccharop_dh PF03435.13 gi|452210740|ref|YP_007490854.1| - 0.017 14.1 0.0 0.028 13.4 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NAD_binding_7 PF13241.1 gi|452210740|ref|YP_007490854.1| - 0.025 14.8 0.0 0.067 13.4 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox_2 PF07992.9 gi|452210740|ref|YP_007490854.1| - 0.028 14.2 0.0 0.089 12.6 0.0 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.15 gi|452210740|ref|YP_007490854.1| - 0.031 14.3 0.0 0.064 13.3 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Methyltransf_18 PF12847.2 gi|452210740|ref|YP_007490854.1| - 0.04 14.4 0.0 0.082 13.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Polysacc_synt_2 PF02719.10 gi|452210740|ref|YP_007490854.1| - 0.067 12.0 0.1 0.17 10.7 0.0 1.7 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein FAD_binding_3 PF01494.14 gi|452210740|ref|YP_007490854.1| - 0.074 12.0 0.0 0.17 10.9 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain ADH_zinc_N PF00107.21 gi|452210740|ref|YP_007490854.1| - 0.097 12.2 0.0 0.49 9.9 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase CPSase_L_chain PF00289.17 gi|452210740|ref|YP_007490854.1| - 0.098 12.7 0.0 0.31 11.1 0.0 1.8 2 0 0 2 2 1 0 Carbamoyl-phosphate synthase L chain, N-terminal domain Pyr_redox PF00070.22 gi|452210740|ref|YP_007490854.1| - 0.11 12.9 0.1 1.9 8.9 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase STT3 PF02516.9 gi|452210741|ref|YP_007490855.1| - 7e-27 94.5 39.7 5.4e-26 91.5 27.5 2.2 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.1 gi|452210741|ref|YP_007490855.1| - 4.3e-08 33.2 1.4 4.3e-08 33.2 1.0 4.7 2 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF3317 PF11779.3 gi|452210742|ref|YP_007490856.1| - 4.4 6.8 7.0 4.7 6.7 4.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3317) Methyltransf_31 PF13847.1 gi|452210744|ref|YP_007490858.1| - 2.6e-25 88.7 0.1 3.1e-25 88.5 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210744|ref|YP_007490858.1| - 1.1e-22 80.3 0.1 3.7e-22 78.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210744|ref|YP_007490858.1| - 7.5e-18 64.7 0.1 9.5e-18 64.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210744|ref|YP_007490858.1| - 6.8e-14 52.3 0.0 1.1e-13 51.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210744|ref|YP_007490858.1| - 1.1e-12 48.2 0.0 1.8e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210744|ref|YP_007490858.1| - 1.3e-11 44.7 0.0 2.3e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452210744|ref|YP_007490858.1| - 8.2e-09 35.5 0.0 1.9e-08 34.3 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210744|ref|YP_007490858.1| - 8.4e-09 35.0 0.0 1.3e-08 34.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.15 gi|452210744|ref|YP_007490858.1| - 1.1e-08 34.5 0.1 1.3e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|452210744|ref|YP_007490858.1| - 3.4e-06 26.3 0.0 3.8e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.9 gi|452210744|ref|YP_007490858.1| - 4e-06 26.1 0.1 4.9e-06 25.8 0.1 1.2 1 1 0 1 1 1 1 Tellurite resistance protein TehB TPMT PF05724.6 gi|452210744|ref|YP_007490858.1| - 6.6e-06 25.7 0.0 6.6e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) PrmA PF06325.8 gi|452210744|ref|YP_007490858.1| - 2.1e-05 23.8 0.0 3.2e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|452210744|ref|YP_007490858.1| - 0.00012 21.2 0.4 0.00027 20.0 0.0 1.7 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase MetW PF07021.7 gi|452210744|ref|YP_007490858.1| - 0.00016 21.1 0.0 0.00022 20.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW N6_N4_Mtase PF01555.13 gi|452210744|ref|YP_007490858.1| - 0.0005 19.6 0.2 0.0039 16.7 0.0 1.9 2 0 0 2 2 2 1 DNA methylase Methyltransf_9 PF08003.6 gi|452210744|ref|YP_007490858.1| - 0.00063 18.5 0.0 0.00075 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Met_10 PF02475.11 gi|452210744|ref|YP_007490858.1| - 0.0012 18.5 0.7 0.0015 18.2 0.0 1.4 2 0 0 2 2 2 1 Met-10+ like-protein NodS PF05401.6 gi|452210744|ref|YP_007490858.1| - 0.005 16.2 0.0 0.0063 15.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Pox_MCEL PF03291.11 gi|452210744|ref|YP_007490858.1| - 0.0056 15.5 0.2 0.049 12.4 0.0 2.0 1 1 1 2 2 2 1 mRNA capping enzyme Methyltransf_32 PF13679.1 gi|452210744|ref|YP_007490858.1| - 0.015 14.9 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Spermine_synth PF01564.12 gi|452210744|ref|YP_007490858.1| - 0.015 14.2 0.2 0.03 13.2 0.2 1.6 1 1 0 1 1 1 0 Spermine/spermidine synthase Methyltransf_29 PF03141.11 gi|452210744|ref|YP_007490858.1| - 0.035 12.4 0.0 0.035 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_15 PF09445.5 gi|452210744|ref|YP_007490858.1| - 0.071 12.6 0.0 0.14 11.7 0.0 1.5 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase PCMT PF01135.14 gi|452210744|ref|YP_007490858.1| - 0.072 12.6 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) SMC_Nse1 PF07574.8 gi|452210744|ref|YP_007490858.1| - 0.076 12.6 0.2 0.097 12.2 0.1 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex ABC_tran PF00005.22 gi|452210745|ref|YP_007490859.1| - 2.1e-17 63.6 0.0 9.3e-17 61.6 0.0 2.2 1 1 0 1 1 1 1 ABC transporter Hexapep PF00132.19 gi|452210745|ref|YP_007490859.1| - 1.5e-10 40.1 13.5 9.9e-09 34.3 5.3 3.4 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) AAA_21 PF13304.1 gi|452210745|ref|YP_007490859.1| - 2.4e-09 37.5 4.0 1e-06 28.9 0.3 3.3 2 1 0 2 2 2 1 AAA domain Hexapep_2 PF14602.1 gi|452210745|ref|YP_007490859.1| - 6.8e-09 35.1 11.6 9.9e-09 34.6 4.9 2.8 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase AAA_29 PF13555.1 gi|452210745|ref|YP_007490859.1| - 3e-06 26.6 0.0 6.4e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|452210745|ref|YP_007490859.1| - 0.00042 20.7 3.7 0.0012 19.1 0.9 2.5 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|452210745|ref|YP_007490859.1| - 0.0016 17.5 0.0 0.0016 17.5 0.0 2.5 3 1 0 4 4 4 1 AAA ATPase domain SMC_N PF02463.14 gi|452210745|ref|YP_007490859.1| - 0.0019 17.4 0.3 0.011 14.9 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_17 PF13207.1 gi|452210745|ref|YP_007490859.1| - 0.0049 17.6 0.1 0.019 15.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|452210745|ref|YP_007490859.1| - 0.0075 15.8 0.0 0.12 11.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|452210745|ref|YP_007490859.1| - 0.011 15.4 0.3 0.049 13.3 0.1 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B FBA_2 PF07735.12 gi|452210745|ref|YP_007490859.1| - 0.011 15.5 3.0 0.94 9.3 0.4 2.5 2 0 0 2 2 2 0 F-box associated DUF87 PF01935.12 gi|452210745|ref|YP_007490859.1| - 0.033 14.0 0.6 0.23 11.2 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function DUF87 AAA_16 PF13191.1 gi|452210745|ref|YP_007490859.1| - 0.039 13.9 0.0 0.18 11.7 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain DUF258 PF03193.11 gi|452210745|ref|YP_007490859.1| - 0.041 13.0 0.0 0.091 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 NTPase_1 PF03266.10 gi|452210745|ref|YP_007490859.1| - 0.055 13.1 0.2 7.2 6.2 0.1 2.5 2 0 0 2 2 2 0 NTPase AAA PF00004.24 gi|452210745|ref|YP_007490859.1| - 0.062 13.5 0.1 0.26 11.4 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|452210745|ref|YP_007490859.1| - 0.088 12.9 0.1 1.5 9.0 0.0 2.7 2 0 0 2 2 2 0 RNA helicase AAA_22 PF13401.1 gi|452210745|ref|YP_007490859.1| - 0.12 12.5 0.2 1.3 9.1 0.1 2.6 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|452210745|ref|YP_007490859.1| - 0.21 11.8 2.5 0.31 11.3 0.2 2.6 2 1 0 2 2 2 0 AAA domain ABC2_membrane PF01061.19 gi|452210746|ref|YP_007490860.1| - 1.3e-23 83.3 29.4 1.3e-23 83.3 20.4 1.3 2 0 0 2 2 2 1 ABC-2 type transporter NTP_transferase PF00483.18 gi|452210747|ref|YP_007490861.1| - 2e-57 194.3 0.0 2.2e-57 194.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|452210747|ref|YP_007490861.1| - 1.1e-11 45.0 0.0 1.2e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|452210747|ref|YP_007490861.1| - 0.024 14.2 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase Glycos_transf_2 PF00535.21 gi|452210749|ref|YP_007490863.1| - 2.6e-27 95.5 0.5 5.2e-27 94.5 0.1 1.6 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452210749|ref|YP_007490863.1| - 2.2e-13 50.5 0.0 3.2e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|452210749|ref|YP_007490863.1| - 2.1e-06 27.1 0.3 1.7e-05 24.1 0.0 2.4 1 1 1 2 2 2 1 Glycosyltransferase like family Glyco_tranf_2_2 PF10111.4 gi|452210749|ref|YP_007490863.1| - 0.00011 21.4 0.2 0.011 14.8 0.0 2.0 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|452210749|ref|YP_007490863.1| - 0.0022 17.7 0.0 0.003 17.2 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|452210749|ref|YP_007490863.1| - 0.052 13.8 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|452210750|ref|YP_007490864.1| - 6e-46 156.0 0.4 1.2e-45 155.0 0.2 1.6 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452210750|ref|YP_007490864.1| - 3.3e-18 66.1 0.0 5.7e-18 65.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|452210750|ref|YP_007490864.1| - 1.4e-11 44.3 2.6 1.7e-10 40.8 0.6 2.3 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|452210750|ref|YP_007490864.1| - 1.3e-10 41.3 0.0 2.3e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|452210750|ref|YP_007490864.1| - 9.8e-10 38.5 0.0 2.3e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452210750|ref|YP_007490864.1| - 3.1e-05 24.1 0.0 5.6e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.6 gi|452210750|ref|YP_007490864.1| - 0.00042 19.8 0.0 0.86 9.0 0.0 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF3880 PF12996.2 gi|452210750|ref|YP_007490864.1| - 0.062 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) Methyltransf_11 PF08241.7 gi|452210752|ref|YP_007490866.1| - 2.5e-21 75.9 0.0 3.5e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210752|ref|YP_007490866.1| - 1e-19 70.5 0.0 1.2e-19 70.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210752|ref|YP_007490866.1| - 5.7e-19 68.4 0.0 7.1e-19 68.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|452210752|ref|YP_007490866.1| - 1.1e-13 51.0 0.0 1.4e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.7 gi|452210752|ref|YP_007490866.1| - 8.3e-13 48.6 0.0 1.4e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210752|ref|YP_007490866.1| - 8.2e-12 45.3 0.0 1.6e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210752|ref|YP_007490866.1| - 4.6e-09 36.8 0.0 6.5e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210752|ref|YP_007490866.1| - 9.8e-05 21.5 0.0 0.00014 21.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.10 gi|452210752|ref|YP_007490866.1| - 0.0001 21.9 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_26 PF13659.1 gi|452210752|ref|YP_007490866.1| - 0.00015 21.7 0.0 0.00027 20.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|452210752|ref|YP_007490866.1| - 0.0002 20.8 0.0 0.00027 20.4 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.9 gi|452210752|ref|YP_007490866.1| - 0.00029 20.2 0.0 0.00043 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|452210752|ref|YP_007490866.1| - 0.00064 18.9 0.0 0.00082 18.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|452210752|ref|YP_007490866.1| - 0.046 13.3 0.0 0.068 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.8 gi|452210752|ref|YP_007490866.1| - 0.052 13.6 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.7 gi|452210752|ref|YP_007490866.1| - 0.059 12.2 0.0 0.068 12.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase UPF0104 PF03706.8 gi|452210753|ref|YP_007490867.1| - 2e-37 129.0 13.9 2.2e-37 128.9 9.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Glycos_transf_2 PF00535.21 gi|452210754|ref|YP_007490868.1| - 1.6e-32 112.4 0.6 2.3e-32 111.9 0.4 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452210754|ref|YP_007490868.1| - 3.2e-12 46.7 0.0 4.3e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|452210754|ref|YP_007490868.1| - 9.4e-08 31.4 0.2 1.3e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|452210754|ref|YP_007490868.1| - 0.11 12.8 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|452210755|ref|YP_007490869.1| - 1.5e-33 115.6 1.1 2.3e-33 115.0 0.7 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452210755|ref|YP_007490869.1| - 1.6e-19 70.3 0.0 3.4e-19 69.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452210755|ref|YP_007490869.1| - 5.2e-16 58.8 0.0 9.2e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|452210755|ref|YP_007490869.1| - 8.6e-11 42.2 0.0 1.3e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|452210755|ref|YP_007490869.1| - 6.9e-08 32.6 0.0 1.6e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 gi|452210755|ref|YP_007490869.1| - 0.019 13.7 0.0 0.023 13.4 0.0 1.2 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_2 PF00535.21 gi|452210756|ref|YP_007490870.1| - 5.2e-21 75.0 0.0 7.6e-21 74.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|452210756|ref|YP_007490870.1| - 9.9e-06 25.5 0.0 1.4e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|452210756|ref|YP_007490870.1| - 0.0027 17.0 0.0 0.0052 16.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|452210756|ref|YP_007490870.1| - 0.0063 15.6 0.0 0.0096 15.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 FMN_red PF03358.10 gi|452210757|ref|YP_007490871.1| - 5.9e-15 55.0 0.1 8.9e-15 54.5 0.1 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452210757|ref|YP_007490871.1| - 0.0038 16.7 0.0 0.0052 16.3 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.20 gi|452210757|ref|YP_007490871.1| - 0.049 13.6 0.2 0.79 9.7 0.1 2.3 1 1 0 1 1 1 0 Flavodoxin TF_Zn_Ribbon PF08271.7 gi|452210758|ref|YP_007490872.1| - 0.0031 16.8 0.2 0.0042 16.3 0.2 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|452210758|ref|YP_007490872.1| - 0.0085 16.3 0.4 0.01 16.0 0.2 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar DNA_ligase_ZBD PF03119.11 gi|452210758|ref|YP_007490872.1| - 0.018 14.6 1.8 0.087 12.5 1.3 1.9 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF2256 PF10013.4 gi|452210758|ref|YP_007490872.1| - 0.03 14.0 2.3 0.12 12.1 1.6 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) UPF0547 PF10571.4 gi|452210758|ref|YP_007490872.1| - 0.053 13.2 0.4 0.095 12.4 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-C2H2_4 PF13894.1 gi|452210758|ref|YP_007490872.1| - 0.075 13.3 0.8 0.85 10.1 0.0 2.2 2 1 0 2 2 2 0 C2H2-type zinc finger Prok-RING_1 PF14446.1 gi|452210758|ref|YP_007490872.1| - 0.15 11.8 1.2 0.21 11.3 0.8 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-HIT PF04438.11 gi|452210758|ref|YP_007490872.1| - 0.4 10.3 3.5 1.3 8.7 2.4 1.8 1 1 0 1 1 1 0 HIT zinc finger zf-C2HC_2 PF13913.1 gi|452210758|ref|YP_007490872.1| - 0.51 10.0 0.1 0.51 10.0 0.1 2.0 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Na_K-ATPase PF00287.13 gi|452210759|ref|YP_007490873.1| - 0.15 10.7 1.6 0.17 10.5 1.1 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Glyco_transf_36 PF06165.6 gi|452210760|ref|YP_007490874.1| - 0.00042 20.1 0.1 0.00086 19.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 36 Glyco_hydro_15 PF00723.16 gi|452210760|ref|YP_007490874.1| - 0.011 14.2 0.0 0.041 12.4 0.0 1.7 2 0 0 2 2 2 0 Glycosyl hydrolases family 15 Acetyltransf_7 PF13508.1 gi|452210761|ref|YP_007490875.1| - 1.1e-06 28.6 0.2 0.0002 21.4 0.1 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452210761|ref|YP_007490875.1| - 5e-05 23.2 0.1 0.003 17.5 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.1 gi|452210761|ref|YP_007490875.1| - 0.0082 16.0 0.3 0.021 14.7 0.1 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452210761|ref|YP_007490875.1| - 0.018 15.1 0.0 0.021 14.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Cache_1 PF02743.13 gi|452210761|ref|YP_007490875.1| - 0.045 13.3 0.1 6.2 6.4 0.0 2.2 2 0 0 2 2 2 0 Cache domain Acetyltransf_3 PF13302.1 gi|452210761|ref|YP_007490875.1| - 0.13 12.4 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain NTP_transf_2 PF01909.18 gi|452210762|ref|YP_007490876.1| - 0.00016 21.9 0.0 0.00047 20.4 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain MdcG PF10620.4 gi|452210762|ref|YP_007490876.1| - 0.073 12.5 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG DUF4096 PF13340.1 gi|452210763|ref|YP_007490877.1| - 1.3e-27 95.4 0.2 3.6e-27 94.0 0.1 1.8 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1 PF01609.16 gi|452210763|ref|YP_007490877.1| - 1.2e-17 64.2 2.0 3.1e-17 62.8 1.4 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.1 gi|452210763|ref|YP_007490877.1| - 1.3e-17 63.7 2.3 1.3e-17 63.7 1.6 1.7 2 0 0 2 2 2 1 Transposase DDE domain PKD PF00801.15 gi|452210764|ref|YP_007490878.1| - 1.1e-10 41.1 1.8 1.1e-10 41.1 1.2 2.2 2 0 0 2 2 2 1 PKD domain NPCBM_assoc PF10633.4 gi|452210764|ref|YP_007490878.1| - 0.00032 20.6 2.8 0.37 10.8 0.0 2.9 2 1 1 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4139 PF13598.1 gi|452210765|ref|YP_007490879.1| - 1.4e-07 31.1 5.7 7.7e-06 25.4 1.0 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4139) DUF4140 PF13600.1 gi|452210765|ref|YP_007490879.1| - 0.00023 21.5 0.3 0.00081 19.8 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) LSM PF01423.17 gi|452210765|ref|YP_007490879.1| - 0.00062 19.2 0.1 0.0016 17.9 0.0 1.7 1 0 0 1 1 1 1 LSM domain DsbD PF02683.10 gi|452210766|ref|YP_007490880.1| - 2.3e-22 79.6 5.6 2.4e-22 79.5 3.8 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|452210766|ref|YP_007490880.1| - 2.3e-10 40.5 4.1 2.6e-10 40.3 2.9 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region NADH-u_ox-rdase PF10785.4 gi|452210766|ref|YP_007490880.1| - 0.029 14.6 0.6 0.06 13.5 0.1 1.7 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit Pox_P21 PF05313.7 gi|452210766|ref|YP_007490880.1| - 0.043 13.0 1.9 0.054 12.7 1.3 1.2 1 0 0 1 1 1 0 Poxvirus P21 membrane protein DUF4112 PF13430.1 gi|452210766|ref|YP_007490880.1| - 0.05 13.5 0.8 0.21 11.5 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4112) TerC PF03741.11 gi|452210766|ref|YP_007490880.1| - 0.054 12.9 4.1 0.074 12.4 2.8 1.3 1 1 0 1 1 1 0 Integral membrane protein TerC family DUF161 PF02588.10 gi|452210766|ref|YP_007490880.1| - 2.1 8.6 12.8 6.7 7.0 8.7 1.8 1 1 0 1 1 1 0 Uncharacterized BCR, YitT family COG1284 HTH_5 PF01022.15 gi|452210767|ref|YP_007490881.1| - 1.7e-14 53.1 0.1 3.4e-14 52.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452210767|ref|YP_007490881.1| - 3.8e-12 45.8 0.0 5e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|452210767|ref|YP_007490881.1| - 0.00066 19.7 0.2 0.0017 18.4 0.1 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_34 PF13601.1 gi|452210767|ref|YP_007490881.1| - 0.00081 19.3 0.1 0.0012 18.8 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|452210767|ref|YP_007490881.1| - 0.0014 18.6 0.1 0.0028 17.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|452210767|ref|YP_007490881.1| - 0.0037 16.6 0.0 0.39 10.1 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|452210767|ref|YP_007490881.1| - 0.034 14.4 0.0 0.069 13.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Baculo_IE-1 PF05290.6 gi|452210767|ref|YP_007490881.1| - 0.051 13.3 1.7 0.072 12.8 0.3 1.8 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) TrmB PF01978.14 gi|452210767|ref|YP_007490881.1| - 0.055 13.1 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB zf-RING_4 PF14570.1 gi|452210767|ref|YP_007490881.1| - 7.2 6.2 8.1 12 5.5 2.6 2.5 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain Methyltransf_31 PF13847.1 gi|452210768|ref|YP_007490882.1| - 1.1e-42 145.1 0.0 1.6e-42 144.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210768|ref|YP_007490882.1| - 2.6e-24 85.5 0.0 6.4e-24 84.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210768|ref|YP_007490882.1| - 6.2e-20 71.3 0.0 1.1e-19 70.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|452210768|ref|YP_007490882.1| - 1.4e-16 61.0 0.0 3.2e-16 59.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210768|ref|YP_007490882.1| - 6.1e-16 58.6 0.0 1.8e-15 57.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210768|ref|YP_007490882.1| - 9.3e-15 54.7 0.0 1.3e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452210768|ref|YP_007490882.1| - 3e-13 49.8 0.0 1.9e-12 47.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.14 gi|452210768|ref|YP_007490882.1| - 3.5e-12 46.3 0.0 5.1e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|452210768|ref|YP_007490882.1| - 4.3e-12 46.3 0.0 7.6e-12 45.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210768|ref|YP_007490882.1| - 1.4e-09 37.5 0.0 2.1e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.13 gi|452210768|ref|YP_007490882.1| - 4.4e-07 29.6 0.0 6.7e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|452210768|ref|YP_007490882.1| - 2.9e-06 26.6 0.0 4.3e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.10 gi|452210768|ref|YP_007490882.1| - 1.2e-05 25.0 0.2 3.3e-05 23.6 0.1 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_15 PF09445.5 gi|452210768|ref|YP_007490882.1| - 3.6e-05 23.3 0.0 5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.15 gi|452210768|ref|YP_007490882.1| - 7.3e-05 21.9 0.0 0.00011 21.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.1 gi|452210768|ref|YP_007490882.1| - 0.00013 21.6 0.0 0.00023 20.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|452210768|ref|YP_007490882.1| - 0.0031 16.5 0.0 0.014 14.4 0.0 1.8 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_3 PF01596.12 gi|452210768|ref|YP_007490882.1| - 0.0082 15.2 0.0 0.011 14.7 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase CheR PF01739.13 gi|452210768|ref|YP_007490882.1| - 0.04 13.1 0.1 0.41 9.9 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain DOT1 PF08123.8 gi|452210768|ref|YP_007490882.1| - 0.063 12.5 0.0 0.088 12.1 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 FtsJ PF01728.14 gi|452210768|ref|YP_007490882.1| - 0.14 12.1 0.0 0.19 11.7 0.0 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase GidB PF02527.10 gi|452210768|ref|YP_007490882.1| - 0.14 11.2 0.1 0.37 9.9 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G LMWPc PF01451.16 gi|452210769|ref|YP_007490883.1| - 5.6e-16 59.1 0.0 6.3e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase zf-Sec23_Sec24 PF04810.10 gi|452210769|ref|YP_007490883.1| - 0.06 12.9 0.7 0.096 12.2 0.1 1.6 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Rad50_zn_hook PF04423.9 gi|452210769|ref|YP_007490883.1| - 0.26 10.7 0.9 0.9 9.0 0.1 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF318 PF03773.8 gi|452210770|ref|YP_007490884.1| - 3.5e-61 206.8 27.6 6.4e-61 206.0 19.1 1.4 1 1 0 1 1 1 1 Predicted permease HTH_5 PF01022.15 gi|452210771|ref|YP_007490885.1| - 1.3e-19 69.5 1.4 2.7e-19 68.5 1.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452210771|ref|YP_007490885.1| - 6.1e-17 61.1 0.1 9.8e-17 60.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|452210771|ref|YP_007490885.1| - 0.0001 21.9 0.0 0.00033 20.3 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|452210771|ref|YP_007490885.1| - 0.0047 16.9 0.2 0.012 15.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452210771|ref|YP_007490885.1| - 0.012 15.3 0.2 0.022 14.4 0.1 1.6 1 1 0 1 1 1 0 MarR family PaaX PF07848.7 gi|452210771|ref|YP_007490885.1| - 0.016 15.1 0.0 0.031 14.2 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein DUF2250 PF10007.4 gi|452210771|ref|YP_007490885.1| - 0.054 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_Crp_2 PF13545.1 gi|452210771|ref|YP_007490885.1| - 0.071 12.9 0.0 0.38 10.5 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|452210771|ref|YP_007490885.1| - 0.079 12.3 0.1 0.49 9.8 0.1 2.3 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF4428 PF14471.1 gi|452210772|ref|YP_007490886.1| - 0.025 14.3 3.4 0.032 13.9 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) zf-C3HC4_3 PF13920.1 gi|452210772|ref|YP_007490886.1| - 0.32 10.7 6.3 3.1 7.5 2.0 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) XPA_N PF01286.13 gi|452210772|ref|YP_007490886.1| - 0.33 10.6 2.4 0.49 10.1 0.0 2.1 2 0 0 2 2 2 0 XPA protein N-terminal HTH_20 PF12840.2 gi|452210774|ref|YP_007490888.1| - 4.2e-12 45.6 0.0 8.1e-12 44.7 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210774|ref|YP_007490888.1| - 7.9e-12 44.6 0.3 1.5e-08 34.1 0.0 2.8 2 1 1 3 3 3 2 Bacterial regulatory protein, arsR family HTH_34 PF13601.1 gi|452210774|ref|YP_007490888.1| - 0.00094 19.1 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_CodY PF08222.6 gi|452210774|ref|YP_007490888.1| - 0.0016 17.6 0.4 0.0073 15.6 0.0 2.0 2 0 0 2 2 2 1 CodY helix-turn-helix domain TrmB PF01978.14 gi|452210774|ref|YP_007490888.1| - 0.013 15.1 0.1 0.071 12.8 0.0 2.2 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB Cdc6_C PF09079.6 gi|452210774|ref|YP_007490888.1| - 0.035 13.8 0.1 0.066 12.9 0.0 1.6 2 0 0 2 2 2 0 CDC6, C terminal Arg_repressor PF01316.16 gi|452210774|ref|YP_007490888.1| - 0.068 12.7 0.5 0.33 10.5 0.2 2.2 1 1 0 1 1 1 0 Arginine repressor, DNA binding domain DUF318 PF03773.8 gi|452210776|ref|YP_007490890.1| - 8.3e-70 235.1 22.5 9.7e-70 234.9 15.6 1.0 1 0 0 1 1 1 1 Predicted permease DUF3937 PF13073.1 gi|452210776|ref|YP_007490890.1| - 0.11 12.4 0.3 0.11 12.4 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF3937) Thioredoxin_3 PF13192.1 gi|452210777|ref|YP_007490891.1| - 3.7e-29 100.3 3.9 4.1e-29 100.2 2.7 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|452210777|ref|YP_007490891.1| - 4.9e-08 32.8 0.2 6.4e-08 32.4 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|452210777|ref|YP_007490891.1| - 0.00086 19.5 0.0 0.0009 19.4 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.1 gi|452210777|ref|YP_007490891.1| - 0.0025 17.9 1.0 0.18 12.0 0.7 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.1 gi|452210777|ref|YP_007490891.1| - 0.0075 16.2 0.8 2.2 8.2 0.3 2.0 1 1 1 2 2 2 2 Thioredoxin ArsD PF06953.6 gi|452210777|ref|YP_007490891.1| - 0.0088 16.2 0.0 0.011 15.9 0.0 1.2 1 1 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD DUF1525 PF07511.6 gi|452210777|ref|YP_007490891.1| - 0.067 13.1 0.1 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) Thioredoxin PF00085.15 gi|452210777|ref|YP_007490891.1| - 0.068 12.8 0.2 0.068 12.8 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin MtrA PF04208.9 gi|452210779|ref|YP_007490893.1| - 2.2e-49 167.2 0.0 2.4e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A ZZ PF00569.12 gi|452210779|ref|YP_007490893.1| - 0.11 12.0 0.1 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type Disaggr_assoc PF08480.5 gi|452210780|ref|YP_007490894.1| - 4e-89 297.2 9.8 4e-89 297.2 6.8 3.2 2 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|452210780|ref|YP_007490894.1| - 3.3e-13 49.6 45.0 2.2e-10 40.5 17.9 3.8 1 1 1 2 2 2 2 Right handed beta helix region Hydantoinase_A PF01968.13 gi|452210781|ref|YP_007490895.1| - 1e-12 47.7 0.0 1.4e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Z1 PF10593.4 gi|452210782|ref|YP_007490896.1| - 0.1 11.8 0.1 0.1 11.8 0.1 1.0 1 0 0 1 1 1 0 Z1 domain DsrH PF04077.7 gi|452210783|ref|YP_007490897.1| - 6.3e-06 25.7 0.0 8.9e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 DsrH like protein DrsE PF02635.10 gi|452210784|ref|YP_007490898.1| - 7.5e-12 45.3 0.0 8.3e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.7 gi|452210784|ref|YP_007490898.1| - 0.0072 15.9 0.0 0.018 14.6 0.0 1.7 1 1 0 1 1 1 1 DsrH like protein DrsE PF02635.10 gi|452210785|ref|YP_007490899.1| - 5.6e-20 71.6 0.0 6.4e-20 71.4 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family FTCD_N PF07837.7 gi|452210785|ref|YP_007490899.1| - 0.064 12.7 0.0 0.083 12.4 0.0 1.2 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain FeS PF04060.8 gi|452210786|ref|YP_007490900.1| - 2.5e-12 46.1 1.5 2.5e-12 46.1 1.1 2.1 3 0 0 3 3 3 1 Putative Fe-S cluster HTH_20 PF12840.2 gi|452210786|ref|YP_007490900.1| - 8.5e-10 38.3 0.0 7.8e-09 35.2 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210786|ref|YP_007490900.1| - 9.9e-08 31.5 0.0 2.5e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TBP PF00352.16 gi|452210786|ref|YP_007490900.1| - 0.0059 15.9 0.3 0.021 14.1 0.1 2.0 2 0 0 2 2 2 1 Transcription factor TFIID (or TATA-binding protein, TBP) YhfH PF14149.1 gi|452210786|ref|YP_007490900.1| - 0.024 14.4 0.1 0.048 13.4 0.0 1.4 1 0 0 1 1 1 0 YhfH-like protein DUF1900 PF08954.6 gi|452210786|ref|YP_007490900.1| - 0.11 12.0 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1900) Ribosomal_S10 PF00338.17 gi|452210787|ref|YP_007490901.1| - 3.3e-30 103.7 0.0 3.6e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|452210788|ref|YP_007490902.1| - 1.9e-58 197.0 0.0 2.8e-58 196.4 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|452210788|ref|YP_007490902.1| - 3.9e-29 100.7 0.4 1.1e-28 99.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|452210788|ref|YP_007490902.1| - 5.1e-18 64.9 3.0 1.5e-17 63.4 1.4 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|452210788|ref|YP_007490902.1| - 1.7e-06 27.9 0.0 4.5e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.1 gi|452210788|ref|YP_007490902.1| - 5.3e-06 25.9 0.3 1.1e-05 24.9 0.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Miro PF08477.8 gi|452210788|ref|YP_007490902.1| - 6.2e-06 26.7 0.0 0.00023 21.6 0.0 2.8 2 1 0 2 2 2 1 Miro-like protein Gtr1_RagA PF04670.7 gi|452210788|ref|YP_007490902.1| - 0.00048 19.3 0.0 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.18 gi|452210788|ref|YP_007490902.1| - 0.012 15.4 0.0 1.3 8.7 0.0 2.3 1 1 0 1 1 1 0 Dynamin family Septin PF00735.13 gi|452210788|ref|YP_007490902.1| - 0.052 12.5 0.0 0.12 11.3 0.0 1.5 1 1 0 1 1 1 0 Septin Ras PF00071.17 gi|452210788|ref|YP_007490902.1| - 0.12 11.6 0.1 0.57 9.5 0.0 2.0 2 1 0 2 2 2 0 Ras family GTP_EFTU PF00009.22 gi|452210789|ref|YP_007490903.1| - 9.5e-60 201.2 0.3 1.7e-59 200.4 0.2 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|452210789|ref|YP_007490903.1| - 3.5e-26 91.1 0.6 6.1e-25 87.1 0.0 2.9 2 1 1 3 3 3 1 Elongation factor G, domain IV EFG_II PF14492.1 gi|452210789|ref|YP_007490903.1| - 2.5e-24 84.8 2.6 3.1e-24 84.5 0.9 1.9 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.20 gi|452210789|ref|YP_007490903.1| - 1.7e-16 60.0 0.8 6e-16 58.3 0.5 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|452210789|ref|YP_007490903.1| - 3.9e-05 23.5 0.0 0.00011 22.1 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase Paramyxo_PCT PF14320.1 gi|452210789|ref|YP_007490903.1| - 0.028 13.3 0.0 0.069 12.0 0.0 1.6 2 0 0 2 2 2 0 Phosphoprotein P region PCT disordered Ras PF00071.17 gi|452210789|ref|YP_007490903.1| - 0.057 12.8 0.1 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Ras family Ribosomal_S7 PF00177.16 gi|452210790|ref|YP_007490904.1| - 1.4e-36 125.3 3.1 1.6e-36 125.1 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.20 gi|452210791|ref|YP_007490905.1| - 2.5e-38 130.2 0.1 2.9e-38 130.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.12 gi|452210792|ref|YP_007490906.1| - 4.6e-22 77.3 2.8 4.7e-16 58.1 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.1 gi|452210792|ref|YP_007490906.1| - 4.6e-16 58.3 0.5 1.9e-14 53.2 0.1 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 gi|452210792|ref|YP_007490906.1| - 3.2e-07 29.8 0.4 0.012 15.2 0.1 2.5 3 0 0 3 3 3 2 KH domain KH_4 PF13083.1 gi|452210792|ref|YP_007490906.1| - 8.3e-07 28.5 1.8 0.022 14.3 0.0 2.8 2 1 1 3 3 3 2 KH domain KH_3 PF13014.1 gi|452210792|ref|YP_007490906.1| - 0.027 14.1 6.0 0.54 9.9 0.3 3.0 3 0 0 3 3 3 0 KH domain Ribosomal_L7Ae PF01248.21 gi|452210793|ref|YP_007490907.1| - 2.8e-17 62.0 0.5 3.3e-17 61.7 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.12 gi|452210795|ref|YP_007490909.1| - 1.7e-49 168.5 1.8 2.6e-49 167.9 1.3 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SpoIIP PF07454.6 gi|452210795|ref|YP_007490909.1| - 0.056 12.6 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) RNA_pol_Rpb1_1 PF04997.7 gi|452210796|ref|YP_007490910.1| - 1e-90 304.4 0.2 4.8e-55 187.1 0.0 2.5 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|452210796|ref|YP_007490910.1| - 3.6e-67 225.4 0.1 6e-67 224.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_5 PF04998.12 gi|452210796|ref|YP_007490910.1| - 5.8e-31 107.7 0.0 1e-30 106.9 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.12 gi|452210796|ref|YP_007490910.1| - 9.1e-31 105.8 0.0 2.2e-30 104.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.13 gi|452210796|ref|YP_007490910.1| - 4.2e-29 101.3 0.0 9.1e-29 100.2 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb2_6 PF00562.23 gi|452210797|ref|YP_007490911.1| - 6.3e-122 407.0 0.0 8.2e-122 406.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.15 gi|452210797|ref|YP_007490911.1| - 9.4e-27 93.0 0.0 2.8e-26 91.5 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.8 gi|452210797|ref|YP_007490911.1| - 3e-25 87.8 0.7 6e-25 86.8 0.5 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|452210797|ref|YP_007490911.1| - 6.9e-17 61.1 1.8 1.3e-16 60.2 1.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 zf-ribbon_3 PF13248.1 gi|452210797|ref|YP_007490911.1| - 0.032 13.4 1.8 0.069 12.3 1.2 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|452210797|ref|YP_007490911.1| - 0.077 12.6 0.5 12 5.6 0.1 2.6 2 0 0 2 2 2 0 Nudix N-terminal RNA_pol_Rpb2_45 PF10385.4 gi|452210797|ref|YP_007490911.1| - 0.088 12.6 0.2 0.23 11.2 0.1 1.7 1 0 0 1 1 1 0 RNA polymerase beta subunit external 1 domain DUF1451 PF07295.6 gi|452210797|ref|YP_007490911.1| - 0.094 12.4 0.6 0.2 11.3 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) zinc_ribbon_2 PF13240.1 gi|452210797|ref|YP_007490911.1| - 0.11 12.0 0.4 6.8 6.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|452210797|ref|YP_007490911.1| - 0.17 11.7 0.3 0.34 10.7 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon RNA_pol_Rpb2_1 PF04563.10 gi|452210798|ref|YP_007490912.1| - 3.8e-56 189.2 1.0 9e-56 188.0 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.9 gi|452210798|ref|YP_007490912.1| - 9.5e-30 103.4 0.3 1.5e-29 102.8 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.11 gi|452210798|ref|YP_007490912.1| - 1.4e-23 82.3 0.0 2.4e-23 81.6 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 CBS PF00571.23 gi|452210798|ref|YP_007490912.1| - 0.085 12.6 0.2 0.68 9.7 0.1 2.4 1 1 0 1 1 1 0 CBS domain RNA_pol_Rpb5_C PF01191.14 gi|452210799|ref|YP_007490913.1| - 4.4e-29 99.8 0.1 5.3e-29 99.6 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain HATPase_c PF02518.21 gi|452210800|ref|YP_007490914.1| - 3e-09 36.5 0.2 6.8e-09 35.4 0.1 1.6 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA_2 PF07568.7 gi|452210800|ref|YP_007490914.1| - 3.7e-09 36.3 0.0 9.3e-09 35.0 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase HATPase_c_2 PF13581.1 gi|452210800|ref|YP_007490914.1| - 2.1e-05 24.3 0.0 3.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain MEDS PF14417.1 gi|452210803|ref|YP_007490917.1| - 6.1e-84 279.8 0.3 1.8e-83 278.2 0.0 2.1 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.6 gi|452210803|ref|YP_007490917.1| - 9.1e-52 173.1 0.0 7.1e-19 67.6 0.0 5.9 5 0 0 5 5 5 4 PAS fold PAS_9 PF13426.1 gi|452210803|ref|YP_007490917.1| - 3.6e-48 162.2 0.1 1.5e-15 57.4 0.0 5.9 6 0 0 6 6 6 5 PAS domain PAS_4 PF08448.5 gi|452210803|ref|YP_007490917.1| - 8e-42 141.7 0.0 6.6e-16 58.3 0.0 4.7 4 0 0 4 4 4 4 PAS fold PAS PF00989.19 gi|452210803|ref|YP_007490917.1| - 3.5e-37 126.6 0.1 3.4e-15 55.7 0.0 5.6 5 0 0 5 5 5 4 PAS fold HisKA_2 PF07568.7 gi|452210803|ref|YP_007490917.1| - 4.8e-31 106.4 1.7 2.1e-30 104.3 1.1 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.1 gi|452210803|ref|YP_007490917.1| - 9.7e-20 69.6 0.0 8.9e-09 34.9 0.0 4.7 4 0 0 4 4 4 2 PAS domain PAS_10 PF13596.1 gi|452210803|ref|YP_007490917.1| - 9.5e-12 45.1 0.0 0.061 13.5 0.0 5.5 5 0 0 5 5 5 4 PAS domain HATPase_c PF02518.21 gi|452210803|ref|YP_007490917.1| - 1e-09 38.1 0.2 2.4e-09 36.9 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|452210803|ref|YP_007490917.1| - 1.1e-06 28.5 0.0 0.43 10.5 0.0 4.4 4 0 0 4 4 4 2 PAS domain PAS_7 PF12860.2 gi|452210803|ref|YP_007490917.1| - 8.2e-05 22.5 0.1 4.6 7.2 0.0 5.4 5 1 0 5 5 5 1 PAS fold HWE_HK PF07536.9 gi|452210803|ref|YP_007490917.1| - 0.012 15.9 0.1 0.041 14.3 0.1 2.0 1 0 0 1 1 1 0 HWE histidine kinase HATPase_c_2 PF13581.1 gi|452210803|ref|YP_007490917.1| - 0.034 13.9 0.0 0.083 12.6 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Cache_2 PF08269.6 gi|452210803|ref|YP_007490917.1| - 0.74 9.8 4.8 1.9 8.4 0.0 3.7 4 0 0 4 4 4 0 Cache domain MEDS PF14417.1 gi|452210804|ref|YP_007490918.1| - 7.3e-71 237.1 0.1 3e-70 235.2 0.1 2.1 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.6 gi|452210804|ref|YP_007490918.1| - 9.6e-68 224.3 0.8 8.8e-19 67.4 0.1 6.8 6 0 0 6 6 6 4 PAS fold PAS_9 PF13426.1 gi|452210804|ref|YP_007490918.1| - 9.1e-53 177.0 3.4 3.7e-16 59.3 0.0 6.9 6 0 0 6 6 6 6 PAS domain PAS_4 PF08448.5 gi|452210804|ref|YP_007490918.1| - 9.8e-35 118.9 0.0 2.6e-07 30.6 0.0 6.9 6 1 0 6 6 6 6 PAS fold HisKA_2 PF07568.7 gi|452210804|ref|YP_007490918.1| - 6.7e-32 109.1 1.7 2.6e-31 107.2 0.6 2.7 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.19 gi|452210804|ref|YP_007490918.1| - 2.1e-25 88.7 0.2 4.7e-06 26.3 0.0 6.7 6 0 0 6 6 6 4 PAS fold PAS_8 PF13188.1 gi|452210804|ref|YP_007490918.1| - 1.8e-14 52.9 0.0 2.7e-05 23.8 0.0 5.5 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|452210804|ref|YP_007490918.1| - 2.5e-13 49.7 0.1 3.4e-12 46.0 0.0 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|452210804|ref|YP_007490918.1| - 0.0067 16.2 0.0 0.02 14.6 0.0 1.9 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|452210804|ref|YP_007490918.1| - 0.018 15.4 0.1 0.018 15.4 0.1 2.7 3 0 0 3 3 3 0 HWE histidine kinase LeuA_dimer PF08502.5 gi|452210804|ref|YP_007490918.1| - 0.021 14.5 0.2 0.2 11.4 0.0 2.4 2 0 0 2 2 2 0 LeuA allosteric (dimerisation) domain AdoHcyase PF05221.12 gi|452210807|ref|YP_007490921.1| - 8.4e-60 201.9 0.1 1.1e-59 201.6 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|452210807|ref|YP_007490921.1| - 6.3e-51 172.4 1.3 6.3e-51 172.4 0.9 1.5 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|452210807|ref|YP_007490921.1| - 1.2e-09 37.5 0.2 2.1e-09 36.7 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|452210807|ref|YP_007490921.1| - 6.5e-06 25.6 0.1 1.2e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_Gly3P_dh_C PF07479.9 gi|452210807|ref|YP_007490921.1| - 0.042 13.5 1.0 0.093 12.4 0.7 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amidohydro_1 PF01979.15 gi|452210808|ref|YP_007490922.1| - 8.6e-61 206.4 1.2 1e-60 206.1 0.9 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|452210808|ref|YP_007490922.1| - 7.1e-15 54.5 0.0 2.4e-14 52.8 0.0 2.0 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|452210808|ref|YP_007490922.1| - 3.4e-13 49.6 1.7 8.1e-11 41.7 0.0 2.4 3 0 0 3 3 3 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|452210808|ref|YP_007490922.1| - 9.1e-13 48.8 0.1 3e-12 47.1 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase A_deaminase PF00962.17 gi|452210808|ref|YP_007490922.1| - 6.6e-07 28.5 0.0 1.1e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase HD PF01966.17 gi|452210809|ref|YP_007490923.1| - 5.7e-15 55.4 0.6 9.4e-15 54.6 0.4 1.3 1 0 0 1 1 1 1 HD domain DUF137 PF02006.11 gi|452210810|ref|YP_007490924.1| - 4.7e-76 254.1 2.7 5.7e-76 253.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 TMF_TATA_bd PF12325.3 gi|452210810|ref|YP_007490924.1| - 0.022 14.5 0.8 0.041 13.6 0.6 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding GHMP_kinases_N PF00288.21 gi|452210812|ref|YP_007490926.1| - 3.7e-07 30.1 2.0 3.7e-07 30.1 1.4 1.9 2 1 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|452210812|ref|YP_007490926.1| - 8.6e-05 22.6 0.1 0.0024 18.0 0.0 2.5 2 0 0 2 2 2 1 GHMP kinases C terminal DFP PF04127.10 gi|452210813|ref|YP_007490927.1| - 3.7e-49 166.8 0.0 2.9e-48 163.9 0.0 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|452210813|ref|YP_007490927.1| - 9.1e-31 106.2 0.1 2.2e-30 104.9 0.0 1.7 1 0 0 1 1 1 1 Flavoprotein NAD_binding_10 PF13460.1 gi|452210813|ref|YP_007490927.1| - 0.00023 21.2 0.7 0.001 19.1 0.0 2.1 2 0 0 2 2 2 1 NADH(P)-binding eRF1_2 PF03464.10 gi|452210814|ref|YP_007490928.1| - 5.4e-06 26.7 0.0 1.3e-05 25.5 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 2 DUF3584 PF12128.3 gi|452210814|ref|YP_007490928.1| - 0.022 12.1 5.7 0.031 11.6 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Mnd1 PF03962.10 gi|452210814|ref|YP_007490928.1| - 0.11 12.0 5.0 0.22 11.1 3.5 1.4 1 0 0 1 1 1 0 Mnd1 family DUF3552 PF12072.3 gi|452210814|ref|YP_007490928.1| - 1.1 8.4 11.2 2 7.5 7.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) DUF1275 PF06912.6 gi|452210815|ref|YP_007490929.1| - 2.9e-53 180.2 18.7 3.4e-53 179.9 12.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) DUF3784 PF12650.2 gi|452210815|ref|YP_007490929.1| - 0.49 10.3 8.1 4.8 7.1 0.2 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) RseC_MucC PF04246.7 gi|452210815|ref|YP_007490929.1| - 3.1 7.3 8.9 0.36 10.4 1.6 2.3 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NosD PF05048.8 gi|452210816|ref|YP_007490930.1| - 9.9e-34 116.5 9.2 1.4e-33 116.0 5.1 2.0 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452210816|ref|YP_007490930.1| - 3.8e-22 77.7 13.0 3.5e-14 52.2 3.6 2.8 2 0 0 2 2 2 2 PKD domain Big_3_4 PF13754.1 gi|452210816|ref|YP_007490930.1| - 0.017 15.4 3.4 0.017 15.4 2.4 3.0 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) VCBS PF13517.1 gi|452210816|ref|YP_007490930.1| - 1.7 9.0 7.9 15 5.9 0.2 3.6 3 1 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella T2SE PF00437.15 gi|452210817|ref|YP_007490931.1| - 3.1e-32 111.5 0.0 6.7e-32 110.4 0.0 1.5 2 0 0 2 2 2 1 Type II/IV secretion system protein Zeta_toxin PF06414.7 gi|452210817|ref|YP_007490931.1| - 0.0076 15.3 0.0 0.018 14.1 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.1 gi|452210817|ref|YP_007490931.1| - 0.0096 16.0 0.1 0.22 11.6 0.0 3.1 4 0 0 4 4 4 1 AAA domain DEAD PF00270.24 gi|452210817|ref|YP_007490931.1| - 0.013 14.9 0.0 0.026 14.0 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase Miro PF08477.8 gi|452210817|ref|YP_007490931.1| - 0.017 15.6 0.0 0.11 13.0 0.0 2.5 2 0 0 2 2 2 0 Miro-like protein AAA_16 PF13191.1 gi|452210817|ref|YP_007490931.1| - 0.023 14.6 0.0 0.071 13.0 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 gi|452210817|ref|YP_007490931.1| - 0.048 13.9 0.0 0.15 12.3 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.1 gi|452210817|ref|YP_007490931.1| - 0.075 12.5 0.0 0.21 11.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF2117 PF09890.4 gi|452210818|ref|YP_007490932.1| - 3.9e-85 284.4 0.1 5.2e-85 284.0 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.16 gi|452210818|ref|YP_007490932.1| - 0.0089 14.8 0.1 0.018 13.8 0.0 1.4 1 0 0 1 1 1 1 ATP-NAD kinase Prismane PF03063.15 gi|452210819|ref|YP_007490933.1| - 2.8e-127 425.2 0.0 3.4e-127 424.9 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DUF2088 PF09861.4 gi|452210821|ref|YP_007490935.1| - 7.3e-50 168.8 0.1 1.2e-49 168.0 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) DUF362 PF04015.7 gi|452210821|ref|YP_007490935.1| - 0.0061 16.0 0.0 0.01 15.3 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) PABP PF00658.13 gi|452210821|ref|YP_007490935.1| - 0.025 14.2 0.0 0.059 13.0 0.0 1.6 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain DUF3798 PF12683.2 gi|452210821|ref|YP_007490935.1| - 0.083 11.9 0.0 1.7 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3798) SSF PF00474.12 gi|452210822|ref|YP_007490936.1| - 1.7e-56 191.6 42.3 2.5e-56 191.0 29.3 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family Asparaginase PF00710.15 gi|452210824|ref|YP_007490938.1| - 1.5e-90 303.3 0.0 1.8e-90 303.0 0.0 1.0 1 0 0 1 1 1 1 Asparaginase zf-primase PF09329.6 gi|452210824|ref|YP_007490938.1| - 0.17 11.5 0.5 0.35 10.5 0.3 1.5 1 0 0 1 1 1 0 Primase zinc finger Lyase_1 PF00206.15 gi|452210825|ref|YP_007490939.1| - 2.6e-63 214.0 0.0 3.9e-63 213.5 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|452210825|ref|YP_007490939.1| - 2.1e-12 46.9 0.2 9e-12 44.8 0.0 2.2 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Paramyx_P_V_C PF03210.8 gi|452210825|ref|YP_007490939.1| - 0.049 13.4 0.2 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal E2F_TDP PF02319.15 gi|452210826|ref|YP_007490940.1| - 0.04 13.4 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain Methyltransf_11 PF08241.7 gi|452210827|ref|YP_007490941.1| - 2.1e-24 85.8 0.0 3e-24 85.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210827|ref|YP_007490941.1| - 6.4e-22 77.9 0.0 7.9e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210827|ref|YP_007490941.1| - 1.7e-20 73.1 0.0 2.2e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210827|ref|YP_007490941.1| - 3.7e-18 65.4 0.0 4.8e-18 65.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|452210827|ref|YP_007490941.1| - 3.9e-17 62.5 0.0 6e-17 61.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210827|ref|YP_007490941.1| - 4.8e-12 46.4 0.0 7e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210827|ref|YP_007490941.1| - 5.9e-12 45.8 0.0 9.2e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|452210827|ref|YP_007490941.1| - 2.9e-07 30.0 0.0 4.1e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.9 gi|452210827|ref|YP_007490941.1| - 1.3e-05 24.4 0.0 1.9e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_26 PF13659.1 gi|452210827|ref|YP_007490941.1| - 0.00022 21.2 0.0 0.00038 20.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|452210827|ref|YP_007490941.1| - 0.0038 16.7 0.0 0.0056 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.6 gi|452210827|ref|YP_007490941.1| - 0.0039 15.9 0.0 0.0052 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_4 PF02390.12 gi|452210827|ref|YP_007490941.1| - 0.012 14.6 0.0 0.031 13.3 0.0 1.5 1 1 0 1 1 1 0 Putative methyltransferase Gate PF07670.9 gi|452210828|ref|YP_007490942.1| - 8.7e-18 64.2 14.8 3.5e-09 36.5 0.2 3.1 2 1 1 3 3 3 3 Nucleoside recognition MogR_DNAbind PF12181.3 gi|452210828|ref|YP_007490942.1| - 0.14 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) ABC1 PF03109.11 gi|452210829|ref|YP_007490943.1| - 1.5e-26 92.6 0.0 4e-26 91.3 0.0 1.7 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.17 gi|452210829|ref|YP_007490943.1| - 1e-07 31.4 0.1 2.7e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|452210829|ref|YP_007490943.1| - 2.7e-05 23.4 0.2 0.00063 18.9 0.0 2.5 1 1 1 2 2 2 1 Protein kinase domain WaaY PF06176.6 gi|452210829|ref|YP_007490943.1| - 0.0014 17.8 0.0 0.0029 16.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) APH PF01636.18 gi|452210829|ref|YP_007490943.1| - 0.008 15.9 0.3 0.02 14.6 0.2 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family HMA PF00403.21 gi|452210830|ref|YP_007490944.1| - 3.2e-05 23.9 0.1 3.8e-05 23.7 0.1 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain Smoothelin PF12510.3 gi|452210830|ref|YP_007490944.1| - 0.12 12.2 0.1 0.19 11.6 0.1 1.4 1 1 0 1 1 1 0 Smoothelin cytoskeleton protein Cytochrom_B_N PF00033.14 gi|452210832|ref|YP_007490946.1| - 0.019 14.3 4.5 0.03 13.6 3.1 1.3 1 0 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.1 gi|452210832|ref|YP_007490946.1| - 0.06 13.4 12.0 0.66 10.1 8.3 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4405) HupF_HypC PF01455.13 gi|452210833|ref|YP_007490947.1| - 1.4e-14 53.8 0.1 1.7e-14 53.5 0.1 1.2 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.11 gi|452210834|ref|YP_007490948.1| - 3.1e-138 460.3 0.0 3.7e-138 460.1 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family CBM_X PF06204.6 gi|452210834|ref|YP_007490948.1| - 0.12 11.8 0.3 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 Putative carbohydrate binding domain HypA PF01155.14 gi|452210835|ref|YP_007490949.1| - 2.6e-31 107.6 2.3 3e-31 107.4 1.6 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family DUF2387 PF09526.5 gi|452210835|ref|YP_007490949.1| - 4.9 7.1 5.3 23 4.9 0.3 2.8 2 1 1 3 3 3 0 Probable metal-binding protein (DUF2387) cobW PF02492.14 gi|452210836|ref|YP_007490950.1| - 2.1e-22 79.4 0.7 2.4e-22 79.2 0.5 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|452210836|ref|YP_007490950.1| - 0.0044 15.8 0.4 0.0049 15.6 0.3 1.1 1 0 0 1 1 1 1 ArgK protein CbiA PF01656.18 gi|452210836|ref|YP_007490950.1| - 0.04 13.3 0.6 0.065 12.6 0.4 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Oxidored_q1 PF00361.15 gi|452210837|ref|YP_007490951.1| - 7.7e-47 159.8 19.6 7.7e-47 159.8 13.6 3.2 2 1 2 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|452210837|ref|YP_007490951.1| - 3.3e-06 26.5 0.7 3.3e-06 26.5 0.5 3.6 2 1 1 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADHdh PF00146.16 gi|452210838|ref|YP_007490952.1| - 9e-24 84.0 22.6 1.4e-23 83.4 15.7 1.3 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.17 gi|452210839|ref|YP_007490953.1| - 1.5e-19 69.8 2.2 1.9e-19 69.6 1.6 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.14 gi|452210840|ref|YP_007490954.1| - 0.0011 19.2 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.14 gi|452210841|ref|YP_007490955.1| - 7.3e-47 159.6 0.0 7.2e-34 117.0 0.0 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|452210841|ref|YP_007490955.1| - 6.9e-14 51.4 2.8 7.6e-13 48.0 0.0 3.0 2 1 0 3 3 3 1 Nickel-dependent hydrogenase Fer4_7 PF12838.2 gi|452210842|ref|YP_007490956.1| - 1.1e-11 44.9 21.7 8.8e-09 35.6 8.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452210842|ref|YP_007490956.1| - 3.3e-11 42.2 15.6 8.8e-08 31.4 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452210842|ref|YP_007490956.1| - 7.5e-09 35.7 10.7 1.1e-08 35.1 7.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452210842|ref|YP_007490956.1| - 1.1e-08 34.7 12.2 1.1e-08 34.7 8.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452210842|ref|YP_007490956.1| - 9.7e-08 31.5 11.8 0.00014 21.5 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452210842|ref|YP_007490956.1| - 3.2e-07 29.9 16.5 0.0001 21.9 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452210842|ref|YP_007490956.1| - 8e-07 29.3 8.9 0.00074 19.8 0.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452210842|ref|YP_007490956.1| - 1e-06 29.3 11.4 0.00078 20.1 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452210842|ref|YP_007490956.1| - 1.7e-06 27.7 13.4 4.5e-06 26.4 9.4 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452210842|ref|YP_007490956.1| - 5.2e-05 23.1 13.8 0.00041 20.3 10.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452210842|ref|YP_007490956.1| - 0.00093 19.7 11.5 0.011 16.2 0.4 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|452210842|ref|YP_007490956.1| - 0.0022 18.1 14.1 0.044 14.1 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452210842|ref|YP_007490956.1| - 0.0023 18.3 21.4 0.039 14.5 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|452210842|ref|YP_007490956.1| - 0.023 14.5 6.2 0.053 13.4 4.3 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452210842|ref|YP_007490956.1| - 0.024 14.9 10.5 0.12 12.7 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain LIM PF00412.17 gi|452210842|ref|YP_007490956.1| - 0.039 14.0 4.6 0.039 14.0 3.2 1.5 1 1 0 1 1 1 0 LIM domain Fer4_18 PF13746.1 gi|452210842|ref|YP_007490956.1| - 1.2 9.6 16.2 1.9 8.9 2.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain HMA PF00403.21 gi|452210843|ref|YP_007490957.1| - 3e-12 46.4 5.3 3.2e-12 46.3 3.7 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF2674 PF10879.3 gi|452210843|ref|YP_007490957.1| - 0.00093 18.8 2.0 0.0034 17.0 0.1 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF2674) UPF0270 PF06794.7 gi|452210843|ref|YP_007490957.1| - 0.045 13.5 0.2 0.048 13.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) DUF692 PF05114.8 gi|452210843|ref|YP_007490957.1| - 0.083 11.7 0.1 0.083 11.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF692) RRM_3 PF08777.6 gi|452210843|ref|YP_007490957.1| - 0.1 12.4 0.5 0.11 12.3 0.3 1.1 1 0 0 1 1 1 0 RNA binding motif Spore_YhcN_YlaJ PF09580.5 gi|452210843|ref|YP_007490957.1| - 1.5 8.8 5.1 1.7 8.7 3.6 1.0 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HMA PF00403.21 gi|452210844|ref|YP_007490958.1| - 2.5e-06 27.5 0.2 2.8e-06 27.3 0.1 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain QueT PF06177.6 gi|452210845|ref|YP_007490959.1| - 0.045 13.7 1.3 0.051 13.5 0.9 1.1 1 0 0 1 1 1 0 QueT transporter DUF2196 PF09962.4 gi|452210846|ref|YP_007490960.1| - 7.2e-31 105.7 4.4 8e-31 105.6 3.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) Yopt PF09467.5 gi|452210846|ref|YP_007490960.1| - 0.15 11.9 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein Yopt MFS_1 PF07690.11 gi|452210847|ref|YP_007490961.1| - 1.4e-52 178.5 50.8 8.4e-51 172.7 26.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|452210847|ref|YP_007490961.1| - 2.5e-05 22.8 6.4 2.5e-05 22.8 4.4 3.1 2 1 1 3 3 3 3 MFS/sugar transport protein Sugar_tr PF00083.19 gi|452210847|ref|YP_007490961.1| - 0.068 11.7 35.1 2.9 6.3 24.3 3.1 1 1 0 1 1 1 0 Sugar (and other) transporter Methyltransf_11 PF08241.7 gi|452210849|ref|YP_007490963.1| - 2.3e-22 79.2 0.0 3.5e-22 78.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210849|ref|YP_007490963.1| - 1.8e-20 73.0 0.0 2.2e-20 72.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210849|ref|YP_007490963.1| - 6.9e-20 71.3 0.0 9.1e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452210849|ref|YP_007490963.1| - 4.6e-15 56.1 0.0 6.6e-15 55.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|452210849|ref|YP_007490963.1| - 6.5e-15 54.8 0.0 7.8e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|452210849|ref|YP_007490963.1| - 1.1e-13 51.3 0.0 2.5e-13 50.2 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452210849|ref|YP_007490963.1| - 1.2e-12 47.8 0.0 1.7e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452210849|ref|YP_007490963.1| - 3e-12 46.8 0.0 4.3e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452210849|ref|YP_007490963.1| - 8.6e-09 34.9 0.0 1.3e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|452210849|ref|YP_007490963.1| - 2.9e-08 33.1 0.0 4.2e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MetW PF07021.7 gi|452210849|ref|YP_007490963.1| - 9.6e-07 28.3 0.0 1.5e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.8 gi|452210849|ref|YP_007490963.1| - 1.5e-06 27.5 0.0 2.1e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.13 gi|452210849|ref|YP_007490963.1| - 9.2e-06 25.3 0.0 1.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.13 gi|452210849|ref|YP_007490963.1| - 9.3e-06 25.2 0.1 0.00023 20.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase TPMT PF05724.6 gi|452210849|ref|YP_007490963.1| - 1.5e-05 24.5 0.0 2.3e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.1 gi|452210849|ref|YP_007490963.1| - 0.00047 19.8 0.0 0.00063 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452210849|ref|YP_007490963.1| - 0.0014 17.7 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.6 gi|452210849|ref|YP_007490963.1| - 0.0022 17.4 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_8 PF05148.10 gi|452210849|ref|YP_007490963.1| - 0.0037 16.9 0.0 0.95 9.0 0.0 2.2 2 0 0 2 2 2 1 Hypothetical methyltransferase RrnaAD PF00398.15 gi|452210849|ref|YP_007490963.1| - 0.0074 15.3 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 gi|452210849|ref|YP_007490963.1| - 0.011 14.8 0.0 0.035 13.1 0.0 1.8 1 1 0 1 1 1 0 Putative methyltransferase FmrO PF07091.6 gi|452210849|ref|YP_007490963.1| - 0.013 14.4 0.0 0.021 13.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Methyltransf_15 PF09445.5 gi|452210849|ref|YP_007490963.1| - 0.019 14.5 0.0 0.029 13.9 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|452210849|ref|YP_007490963.1| - 0.029 13.7 0.0 0.041 13.2 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 CheR PF01739.13 gi|452210849|ref|YP_007490963.1| - 0.031 13.5 0.1 1.6 7.9 0.0 2.5 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain MethyltransfD12 PF02086.10 gi|452210849|ref|YP_007490963.1| - 0.11 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase DOT1 PF08123.8 gi|452210849|ref|YP_007490963.1| - 0.12 11.6 0.0 0.32 10.2 0.0 1.7 1 1 1 2 2 2 0 Histone methylation protein DOT1 AdoMet_MTase PF07757.8 gi|452210849|ref|YP_007490963.1| - 0.14 12.3 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase N2227 PF07942.7 gi|452210849|ref|YP_007490963.1| - 0.14 11.1 0.0 0.25 10.2 0.0 1.4 1 0 0 1 1 1 0 N2227-like protein Multi_Drug_Res PF00893.14 gi|452210850|ref|YP_007490964.1| - 3.8e-29 100.9 7.9 4.9e-29 100.6 5.5 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.15 gi|452210850|ref|YP_007490964.1| - 0.018 15.0 15.8 0.025 14.6 10.9 1.3 1 1 0 1 1 1 0 EamA-like transporter family EmrE PF13536.1 gi|452210850|ref|YP_007490964.1| - 0.023 14.8 13.5 0.073 13.2 9.3 1.7 1 1 0 1 1 1 0 Multidrug resistance efflux transporter DUF4293 PF14126.1 gi|452210850|ref|YP_007490964.1| - 0.37 10.6 7.3 3.5 7.5 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) YjgP_YjgQ PF03739.9 gi|452210850|ref|YP_007490964.1| - 0.66 8.6 8.0 0.95 8.1 5.5 1.3 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family Acyl_transf_3 PF01757.17 gi|452210850|ref|YP_007490964.1| - 0.9 8.3 14.3 0.95 8.2 9.9 1.0 1 0 0 1 1 1 0 Acyltransferase family DUF2108 PF09881.4 gi|452210850|ref|YP_007490964.1| - 0.92 9.3 8.7 4.5 7.1 3.4 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2108) TPT PF03151.11 gi|452210850|ref|YP_007490964.1| - 1.6 8.3 9.4 2.9 7.5 6.5 1.5 1 1 0 1 1 1 0 Triose-phosphate Transporter family 7TMR-DISM_7TM PF07695.6 gi|452210850|ref|YP_007490964.1| - 7.8 6.1 18.2 14 5.2 12.6 1.5 1 1 0 1 1 1 0 7TM diverse intracellular signalling zinc_ribbon_6 PF14599.1 gi|452210852|ref|YP_007490966.1| - 0.023 14.4 1.0 0.23 11.2 0.7 2.0 1 1 1 2 2 2 0 Zinc-ribbon Caprin-1_C PF12287.3 gi|452210852|ref|YP_007490966.1| - 0.26 10.5 4.9 0.26 10.6 3.4 1.1 1 0 0 1 1 1 0 Cytoplasmic activation/proliferation-associated protein-1 C term zinc_ribbon_6 PF14599.1 gi|452210853|ref|YP_007490967.1| - 0.0069 16.1 0.5 0.012 15.3 0.3 1.4 1 1 0 1 1 1 1 Zinc-ribbon DNA_RNApol_7kD PF03604.8 gi|452210853|ref|YP_007490967.1| - 0.079 12.4 2.3 0.22 10.9 1.6 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit eIF-1a PF01176.14 gi|452210854|ref|YP_007490968.1| - 1.9e-17 62.4 0.2 2.2e-17 62.2 0.2 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 zinc_ribbon_6 PF14599.1 gi|452210855|ref|YP_007490969.1| - 0.012 15.4 2.3 0.082 12.7 0.0 2.1 1 1 1 2 2 2 0 Zinc-ribbon DZR PF12773.2 gi|452210855|ref|YP_007490969.1| - 0.021 14.6 1.2 0.028 14.2 0.8 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-trcl PF13451.1 gi|452210855|ref|YP_007490969.1| - 0.17 11.5 2.7 4 7.1 0.1 2.2 2 0 0 2 2 2 0 Probable zinc-binding domain OrfB_Zn_ribbon PF07282.6 gi|452210855|ref|YP_007490969.1| - 0.21 11.2 0.8 0.27 10.9 0.6 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_6 PF14599.1 gi|452210856|ref|YP_007490970.1| - 0.0043 16.8 0.3 0.0071 16.1 0.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.6 gi|452210856|ref|YP_007490970.1| - 0.046 13.3 1.0 0.061 12.9 0.7 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|452210856|ref|YP_007490970.1| - 0.13 11.7 2.4 0.5 9.8 1.7 1.8 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2_3 PF13878.1 gi|452210856|ref|YP_007490970.1| - 0.2 11.2 1.7 0.29 10.7 0.1 1.9 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO eIF-1a PF01176.14 gi|452210857|ref|YP_007490971.1| - 4.8e-10 38.7 0.6 5.5e-10 38.5 0.4 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TPP_enzyme_N PF02776.13 gi|452210858|ref|YP_007490972.1| - 8.6e-55 184.8 1.9 1.5e-54 184.0 0.1 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|452210858|ref|YP_007490972.1| - 1.5e-29 102.4 0.0 4.6e-29 100.9 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.16 gi|452210858|ref|YP_007490972.1| - 1.5e-27 96.0 0.0 5.9e-27 94.1 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.11 gi|452210858|ref|YP_007490972.1| - 0.015 14.8 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Aldedh PF00171.17 gi|452210859|ref|YP_007490973.1| - 1.6e-133 445.4 0.0 1.8e-133 445.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|452210859|ref|YP_007490973.1| - 0.002 16.9 0.0 0.0027 16.4 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Lipase_bact_N PF12262.3 gi|452210861|ref|YP_007490975.1| - 0.043 13.0 0.0 0.045 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal Cupredoxin_1 PF13473.1 gi|452210862|ref|YP_007490976.1| - 1.4e-09 37.7 0.0 2.2e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|452210862|ref|YP_007490976.1| - 7.2e-09 35.7 0.7 0.00031 20.9 0.0 2.2 1 1 1 2 2 2 2 Copper binding proteins, plastocyanin/azurin family TauD PF02668.11 gi|452210863|ref|YP_007490977.1| - 0.083 12.5 0.0 0.083 12.5 0.0 1.0 1 0 0 1 1 1 0 Taurine catabolism dioxygenase TauD, TfdA family Methyltransf_18 PF12847.2 gi|452210864|ref|YP_007490978.1| - 1.2e-13 51.5 0.0 2.1e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210864|ref|YP_007490978.1| - 9.6e-10 38.4 0.0 1.5e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210864|ref|YP_007490978.1| - 2e-09 37.1 0.0 3.1e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210864|ref|YP_007490978.1| - 5.4e-08 33.1 0.0 1.1e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452210864|ref|YP_007490978.1| - 1.8e-07 30.4 0.0 2.5e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|452210864|ref|YP_007490978.1| - 2e-07 30.7 0.0 2.9e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|452210864|ref|YP_007490978.1| - 2.3e-07 31.1 0.0 4.3e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|452210864|ref|YP_007490978.1| - 5.7e-07 29.2 0.0 1.6e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|452210864|ref|YP_007490978.1| - 1.4e-06 27.8 0.0 2.1e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.9 gi|452210864|ref|YP_007490978.1| - 3.2e-06 26.6 0.0 4.8e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|452210864|ref|YP_007490978.1| - 3.2e-06 27.5 0.0 5.8e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|452210864|ref|YP_007490978.1| - 4.8e-06 25.8 0.0 7.1e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_26 PF13659.1 gi|452210864|ref|YP_007490978.1| - 5.3e-06 26.4 0.0 7.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|452210864|ref|YP_007490978.1| - 2.1e-05 23.7 0.0 3.9e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|452210864|ref|YP_007490978.1| - 6.3e-05 22.2 0.1 0.00015 21.0 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|452210864|ref|YP_007490978.1| - 7.6e-05 22.3 0.1 0.00012 21.7 0.0 1.4 1 1 0 1 1 1 1 Met-10+ like-protein DREV PF05219.7 gi|452210864|ref|YP_007490978.1| - 0.00026 19.9 0.0 0.00039 19.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Ubie_methyltran PF01209.13 gi|452210864|ref|YP_007490978.1| - 0.00026 20.1 0.0 0.00044 19.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.4 gi|452210864|ref|YP_007490978.1| - 0.0034 16.8 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.6 gi|452210864|ref|YP_007490978.1| - 0.0034 16.1 0.0 0.0078 14.9 0.0 1.5 1 1 1 2 2 2 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.12 gi|452210864|ref|YP_007490978.1| - 0.0095 15.0 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase ArdA PF07275.6 gi|452210864|ref|YP_007490978.1| - 0.025 14.8 0.1 0.052 13.7 0.0 1.4 1 0 0 1 1 1 0 Antirestriction protein (ArdA) GCD14 PF08704.5 gi|452210864|ref|YP_007490978.1| - 0.031 13.7 0.0 0.058 12.8 0.0 1.4 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF938 PF06080.7 gi|452210864|ref|YP_007490978.1| - 0.038 13.5 0.0 0.055 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) TehB PF03848.9 gi|452210864|ref|YP_007490978.1| - 0.063 12.4 0.0 0.099 11.7 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_2 PF00891.13 gi|452210864|ref|YP_007490978.1| - 0.091 11.9 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase RimK PF08443.6 gi|452210865|ref|YP_007490979.1| - 7.9e-48 162.4 0.0 1.4e-47 161.6 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|452210865|ref|YP_007490979.1| - 2.2e-18 65.9 0.0 5.4e-18 64.7 0.0 1.6 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_4 PF13535.1 gi|452210865|ref|YP_007490979.1| - 1.2e-12 47.8 0.0 1.8e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|452210865|ref|YP_007490979.1| - 5.9e-08 32.7 0.0 8.9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452210865|ref|YP_007490979.1| - 1.6e-06 27.1 0.0 1.2e-05 24.2 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_YheCD PF14398.1 gi|452210865|ref|YP_007490979.1| - 0.00018 20.3 0.1 0.26 10.0 0.0 3.1 1 1 2 3 3 3 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.8 gi|452210865|ref|YP_007490979.1| - 0.00025 20.5 0.0 0.001 18.4 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.17 gi|452210865|ref|YP_007490979.1| - 0.0027 17.1 0.0 0.0059 15.9 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Synapsin_C PF02750.9 gi|452210865|ref|YP_007490979.1| - 0.0046 16.0 0.0 0.0066 15.5 0.0 1.1 1 0 0 1 1 1 1 Synapsin, ATP binding domain CPSase_L_D2 PF02786.12 gi|452210865|ref|YP_007490979.1| - 0.0067 15.7 0.0 0.031 13.5 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.1 gi|452210865|ref|YP_007490979.1| - 0.0068 15.5 0.0 0.21 10.6 0.0 2.4 2 1 0 2 2 2 1 Sugar-transfer associated ATP-grasp Ins134_P3_kin PF05770.6 gi|452210865|ref|YP_007490979.1| - 0.025 13.6 0.0 0.63 9.0 0.0 2.3 1 1 1 2 2 2 0 Inositol 1, 3, 4-trisphosphate 5/6-kinase Herpes_HEPA PF03324.9 gi|452210865|ref|YP_007490979.1| - 0.054 13.5 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein TPR_11 PF13414.1 gi|452210866|ref|YP_007490980.1| - 4.9e-102 333.6 50.0 2.6e-17 62.2 0.1 6.7 2 2 6 8 8 8 8 TPR repeat TPR_1 PF00515.23 gi|452210866|ref|YP_007490980.1| - 2.2e-92 299.2 39.5 3.1e-10 39.2 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452210866|ref|YP_007490980.1| - 3e-80 257.8 38.8 8.8e-08 31.5 0.2 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452210866|ref|YP_007490980.1| - 7.2e-69 227.7 41.4 9.3e-13 47.9 0.2 6.7 1 1 8 9 9 9 9 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452210866|ref|YP_007490980.1| - 3.1e-64 212.4 40.7 2.9e-11 43.7 0.3 6.4 1 1 6 8 8 8 8 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452210866|ref|YP_007490980.1| - 2.3e-57 186.4 28.1 1.1e-06 28.4 0.1 10.5 11 0 0 11 11 10 9 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452210866|ref|YP_007490980.1| - 2.8e-54 176.8 37.8 2.1e-06 27.1 0.3 10.2 8 2 2 10 10 10 10 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452210866|ref|YP_007490980.1| - 3.9e-50 163.7 20.2 3.2e-06 27.2 0.1 10.1 1 1 9 10 10 10 10 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452210866|ref|YP_007490980.1| - 1.2e-38 131.2 26.1 8.6e-08 32.4 0.6 7.7 3 2 4 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452210866|ref|YP_007490980.1| - 8.6e-38 125.1 20.0 6.8e-05 22.3 0.0 10.2 8 2 2 10 10 10 8 Tetratricopeptide repeat Apc3 PF12895.2 gi|452210866|ref|YP_007490980.1| - 7.4e-26 90.1 15.4 4.4e-09 36.3 0.4 5.3 2 2 2 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|452210866|ref|YP_007490980.1| - 1.3e-25 88.0 21.1 0.26 11.8 0.1 10.2 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452210866|ref|YP_007490980.1| - 2.4e-25 88.1 8.7 3e-06 26.9 0.4 6.4 1 1 6 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452210866|ref|YP_007490980.1| - 2.1e-22 78.2 26.0 0.0009 19.0 0.1 10.0 10 0 0 10 10 10 4 Tetratricopeptide repeat MIT PF04212.13 gi|452210866|ref|YP_007490980.1| - 2.3e-15 56.2 32.7 0.023 14.5 0.1 9.9 8 1 2 10 10 10 4 MIT (microtubule interacting and transport) domain DUF3856 PF12968.2 gi|452210866|ref|YP_007490980.1| - 5.2e-15 55.5 12.6 0.014 15.1 0.1 8.2 1 1 6 7 7 7 5 Domain of Unknown Function (DUF3856) NARP1 PF12569.3 gi|452210866|ref|YP_007490980.1| - 1.1e-13 50.8 7.3 0.036 12.8 0.0 5.2 2 2 3 5 5 5 5 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|452210866|ref|YP_007490980.1| - 2.7e-11 43.0 15.1 0.0003 19.9 0.2 4.6 1 1 2 4 4 4 4 Tetratricopeptide repeat BTAD PF03704.12 gi|452210866|ref|YP_007490980.1| - 1.1e-10 42.0 4.7 0.032 14.5 0.5 4.6 1 1 3 5 5 5 2 Bacterial transcriptional activator domain Coatomer_E PF04733.9 gi|452210866|ref|YP_007490980.1| - 3.5e-10 39.5 9.7 2.6e-06 26.8 0.2 4.5 2 2 3 5 5 5 2 Coatomer epsilon subunit PPR PF01535.15 gi|452210866|ref|YP_007490980.1| - 1.3e-09 37.3 10.8 0.51 10.4 0.0 8.5 9 0 0 9 9 9 3 PPR repeat TPR_3 PF07720.7 gi|452210866|ref|YP_007490980.1| - 1.9e-09 37.0 23.3 0.093 12.5 0.0 9.5 9 1 1 10 10 10 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452210866|ref|YP_007490980.1| - 4.7e-09 36.2 11.8 0.23 11.6 0.0 5.7 2 2 2 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452210866|ref|YP_007490980.1| - 1.3e-07 31.3 14.3 0.55 10.1 0.0 8.2 6 3 3 9 9 9 1 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.9 gi|452210866|ref|YP_007490980.1| - 1.8e-07 30.9 0.4 11 6.8 0.0 6.6 6 0 0 6 6 6 0 Tetratricopeptide repeat FAT PF02259.18 gi|452210866|ref|YP_007490980.1| - 2.7e-07 29.9 9.1 0.32 9.9 0.2 5.9 1 1 3 5 5 5 3 FAT domain TPR_5 PF12688.2 gi|452210866|ref|YP_007490980.1| - 5.7e-07 29.6 7.5 0.37 10.8 0.3 5.8 2 2 4 6 6 6 3 Tetratrico peptide repeat SHNi-TPR PF10516.4 gi|452210866|ref|YP_007490980.1| - 7.3e-07 28.3 16.3 1.4 8.2 0.1 8.6 9 0 0 9 9 8 1 SHNi-TPR Apc5 PF12862.2 gi|452210866|ref|YP_007490980.1| - 0.00017 21.3 9.1 1.3 8.8 0.1 6.6 5 2 1 7 7 7 1 Anaphase-promoting complex subunit 5 NRDE-2 PF08424.5 gi|452210866|ref|YP_007490980.1| - 0.00082 18.3 3.2 0.22 10.3 0.0 3.1 2 1 0 3 3 3 1 NRDE-2, necessary for RNA interference ChAPs PF09295.5 gi|452210866|ref|YP_007490980.1| - 0.012 14.3 0.7 0.26 10.0 0.0 2.3 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Clathrin PF00637.15 gi|452210866|ref|YP_007490980.1| - 0.019 14.5 14.2 0.19 11.3 0.5 5.4 1 1 2 4 4 4 0 Region in Clathrin and VPS Pepsin-I3 PF06394.8 gi|452210866|ref|YP_007490980.1| - 0.02 14.5 2.8 35 4.1 0.1 5.7 7 0 0 7 7 6 0 Pepsin inhibitor-3-like repeated domain RPN7 PF10602.4 gi|452210866|ref|YP_007490980.1| - 0.079 12.3 10.3 0.16 11.3 0.5 4.7 3 1 3 7 7 7 0 26S proteasome subunit RPN7 Surfac_D-trimer PF09006.6 gi|452210866|ref|YP_007490980.1| - 0.12 12.1 4.4 1.2 8.9 0.0 3.7 5 0 0 5 5 2 0 Lung surfactant protein D coiled-coil trimerisation Acyl-CoA_ox_N PF14749.1 gi|452210866|ref|YP_007490980.1| - 0.15 12.3 0.7 5.8 7.2 0.0 3.3 4 1 0 4 4 3 0 Acyl-coenzyme A oxidase N-terminal IglC PF11550.3 gi|452210866|ref|YP_007490980.1| - 0.19 11.0 0.1 0.37 10.0 0.1 1.4 1 0 0 1 1 1 0 Intracellular growth locus C protein Exonuc_VII_S PF02609.11 gi|452210866|ref|YP_007490980.1| - 0.26 11.0 8.8 11 5.9 0.1 5.5 5 0 0 5 5 5 0 Exonuclease VII small subunit Aida_N PF08910.5 gi|452210866|ref|YP_007490980.1| - 0.55 10.4 7.1 21 5.4 0.2 4.0 3 1 1 4 4 4 0 Aida N-terminus Lambda_Kil PF06301.6 gi|452210866|ref|YP_007490980.1| - 1.1 8.7 21.8 1.3 8.5 0.0 7.7 10 0 0 10 10 10 0 Bacteriophage lambda Kil protein HAD_2 PF13419.1 gi|452210867|ref|YP_007490981.1| - 2.6e-32 112.4 0.2 3.4e-32 112.0 0.1 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452210867|ref|YP_007490981.1| - 1.1e-16 61.9 0.0 1.6e-15 58.1 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452210867|ref|YP_007490981.1| - 2.5e-09 36.7 0.0 4.1e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|452210867|ref|YP_007490981.1| - 1.4e-06 28.6 0.3 1.9e-06 28.1 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NT5C PF06941.7 gi|452210867|ref|YP_007490981.1| - 0.0012 18.3 0.6 0.021 14.3 0.4 2.3 1 1 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DUF705 PF05152.7 gi|452210867|ref|YP_007490981.1| - 0.0035 16.3 0.0 0.14 11.1 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF705) NIF PF03031.13 gi|452210867|ref|YP_007490981.1| - 0.0044 16.6 0.0 0.052 13.2 0.0 2.3 2 1 0 2 2 2 1 NLI interacting factor-like phosphatase Acid_PPase PF12689.2 gi|452210867|ref|YP_007490981.1| - 0.01 15.4 0.0 0.8 9.3 0.0 2.3 2 0 0 2 2 2 0 Acid Phosphatase Hydrolase_6 PF13344.1 gi|452210867|ref|YP_007490981.1| - 0.031 14.1 0.0 0.093 12.6 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|452210867|ref|YP_007490981.1| - 0.061 12.4 0.2 0.13 11.4 0.0 1.6 2 0 0 2 2 2 0 Putative Phosphatase TPR_1 PF00515.23 gi|452210868|ref|YP_007490982.1| - 3.9e-71 231.9 17.3 1.9e-11 43.0 0.0 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452210868|ref|YP_007490982.1| - 2.8e-57 190.2 11.0 9.8e-16 57.1 0.2 4.2 4 0 0 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|452210868|ref|YP_007490982.1| - 7.2e-54 175.4 14.8 1.8e-08 33.6 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452210868|ref|YP_007490982.1| - 4.2e-40 132.5 21.8 8.2e-06 25.2 0.0 8.1 7 1 1 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452210868|ref|YP_007490982.1| - 3.8e-38 129.2 8.8 5.5e-11 42.2 0.0 5.1 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452210868|ref|YP_007490982.1| - 1.8e-36 121.2 9.1 2.4e-05 24.1 0.1 8.5 8 1 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452210868|ref|YP_007490982.1| - 1.3e-35 121.2 9.1 5.6e-08 33.2 0.0 4.9 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452210868|ref|YP_007490982.1| - 4.4e-26 88.9 7.0 0.00051 20.4 0.0 7.9 2 2 6 8 8 8 8 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452210868|ref|YP_007490982.1| - 1.2e-24 85.8 0.5 0.00018 21.3 0.2 6.0 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452210868|ref|YP_007490982.1| - 7.4e-24 83.8 6.6 5.9e-07 29.7 0.1 5.7 2 2 3 6 6 6 5 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452210868|ref|YP_007490982.1| - 1.1e-17 63.2 9.7 0.25 11.8 0.0 7.7 8 0 0 8 8 7 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|452210868|ref|YP_007490982.1| - 1.8e-15 56.7 7.1 5.2e-05 23.2 0.1 4.2 1 1 2 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.2 gi|452210868|ref|YP_007490982.1| - 3.2e-12 46.4 5.4 0.0038 17.0 0.0 6.0 1 1 4 5 5 5 3 Domain of Unknown Function (DUF3856) TPR_10 PF13374.1 gi|452210868|ref|YP_007490982.1| - 3.5e-12 45.8 5.7 0.12 12.3 0.0 6.9 7 0 0 7 7 7 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452210868|ref|YP_007490982.1| - 6.9e-11 41.8 4.1 0.083 12.7 0.0 5.2 4 2 2 6 6 5 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.1 gi|452210868|ref|YP_007490982.1| - 4.9e-10 38.4 8.2 0.17 11.7 0.0 7.1 6 1 1 7 7 7 2 Tetratricopeptide repeat MIT PF04212.13 gi|452210868|ref|YP_007490982.1| - 8.2e-07 28.8 13.8 1.9 8.4 0.1 7.1 6 2 2 8 8 7 1 MIT (microtubule interacting and transport) domain NARP1 PF12569.3 gi|452210868|ref|YP_007490982.1| - 9.2e-07 27.9 3.8 0.09 11.5 0.1 3.7 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 TPR_20 PF14561.1 gi|452210868|ref|YP_007490982.1| - 1.7e-05 24.8 1.0 4.7 7.4 0.0 4.2 3 1 0 4 4 4 0 Tetratricopeptide repeat ChAPs PF09295.5 gi|452210868|ref|YP_007490982.1| - 2.1e-05 23.4 0.2 0.027 13.2 0.0 2.1 2 0 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TOM20_plant PF06552.7 gi|452210868|ref|YP_007490982.1| - 0.00011 21.8 2.8 0.016 14.7 0.0 4.1 2 2 2 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 FAT PF02259.18 gi|452210868|ref|YP_007490982.1| - 0.00015 20.8 2.5 0.15 11.0 1.7 3.6 1 1 0 1 1 1 1 FAT domain DUF627 PF04781.7 gi|452210868|ref|YP_007490982.1| - 0.0023 17.5 0.1 0.29 10.7 0.0 3.1 3 1 0 3 3 3 1 Protein of unknown function (DUF627) DUF2550 PF10739.4 gi|452210868|ref|YP_007490982.1| - 0.0044 16.9 0.0 0.0065 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2550) TPR_3 PF07720.7 gi|452210868|ref|YP_007490982.1| - 0.045 13.5 8.3 1.4 8.7 0.0 5.4 7 0 0 7 7 5 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|452210868|ref|YP_007490982.1| - 0.059 12.6 10.7 2.3 7.5 0.0 5.1 5 0 0 5 5 5 0 SHNi-TPR NTase_sub_bind PF08780.6 gi|452210868|ref|YP_007490982.1| - 0.064 13.0 0.7 69 3.2 0.0 4.1 4 1 0 4 4 4 0 Nucleotidyltransferase substrate binding protein like TcdB_N PF12918.2 gi|452210868|ref|YP_007490982.1| - 0.17 11.9 2.9 3.1 7.9 0.4 2.9 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain UPF0122 PF04297.9 gi|452210868|ref|YP_007490982.1| - 0.31 11.0 2.7 3.3 7.7 0.0 3.7 3 2 1 4 4 4 0 Putative helix-turn-helix protein, YlxM / p13 like Colicin PF01024.14 gi|452210868|ref|YP_007490982.1| - 0.34 10.4 4.6 15 5.0 0.0 3.6 3 2 2 5 5 5 0 Colicin pore forming domain Thg1C PF14413.1 gi|452210868|ref|YP_007490982.1| - 0.4 10.3 5.4 2.6 7.7 1.1 3.7 2 1 1 3 3 3 0 Thg1 C terminal domain HTH_OrfB_IS605 PF12323.3 gi|452210868|ref|YP_007490982.1| - 0.45 9.8 2.6 2.5 7.4 0.0 3.1 3 0 0 3 3 3 0 Helix-turn-helix domain Response_reg PF00072.19 gi|452210870|ref|YP_007490984.1| - 6.1e-21 74.5 0.0 1e-20 73.8 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain HTH_24 PF13412.1 gi|452210870|ref|YP_007490984.1| - 0.00056 19.2 0.6 0.0012 18.1 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|452210870|ref|YP_007490984.1| - 0.0013 18.2 0.2 0.0022 17.5 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|452210870|ref|YP_007490984.1| - 0.002 17.7 0.3 0.0047 16.5 0.2 1.6 1 0 0 1 1 1 1 HTH domain HSDR_N PF04313.9 gi|452210870|ref|YP_007490984.1| - 0.029 14.0 0.9 0.06 13.0 0.6 1.5 1 1 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) HTH_Mga PF08280.6 gi|452210870|ref|YP_007490984.1| - 0.053 13.2 0.2 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain FeoC PF09012.5 gi|452210870|ref|YP_007490984.1| - 0.068 12.8 0.0 0.17 11.5 0.0 1.6 2 0 0 2 2 2 0 FeoC like transcriptional regulator TFIIE_alpha PF02002.12 gi|452210870|ref|YP_007490984.1| - 0.075 12.5 0.4 0.18 11.3 0.3 1.6 1 0 0 1 1 1 0 TFIIE alpha subunit MarR_2 PF12802.2 gi|452210871|ref|YP_007490985.1| - 8.6e-07 28.5 0.0 1.2e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|452210871|ref|YP_007490985.1| - 0.00011 21.7 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|452210871|ref|YP_007490985.1| - 0.00041 19.6 0.0 0.00071 18.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|452210871|ref|YP_007490985.1| - 0.00091 18.8 0.1 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|452210871|ref|YP_007490985.1| - 0.0025 17.5 0.0 0.0035 17.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|452210871|ref|YP_007490985.1| - 0.0044 16.6 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 HTH domain DUF1495 PF07381.6 gi|452210871|ref|YP_007490985.1| - 0.0066 16.0 0.0 0.33 10.6 0.0 2.0 1 1 1 2 2 2 1 Winged helix DNA-binding domain (DUF1495) HTH_5 PF01022.15 gi|452210871|ref|YP_007490985.1| - 0.0076 15.9 0.1 0.01 15.4 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.15 gi|452210871|ref|YP_007490985.1| - 0.0079 16.2 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.6 gi|452210871|ref|YP_007490985.1| - 0.0097 15.7 0.1 0.016 15.0 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_27 PF13463.1 gi|452210871|ref|YP_007490985.1| - 0.023 14.9 0.0 0.033 14.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|452210871|ref|YP_007490985.1| - 0.051 13.3 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Mga PF05043.8 gi|452210871|ref|YP_007490985.1| - 0.068 13.4 0.2 0.17 12.2 0.1 1.8 1 1 0 1 1 1 0 Mga helix-turn-helix domain RepL PF05732.6 gi|452210871|ref|YP_007490985.1| - 0.078 12.1 0.1 0.084 12.0 0.1 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_Crp_2 PF13545.1 gi|452210871|ref|YP_007490985.1| - 0.12 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FUR PF01475.14 gi|452210871|ref|YP_007490985.1| - 0.12 12.3 0.1 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family Pyr_redox_2 PF07992.9 gi|452210872|ref|YP_007490986.1| - 8.4e-32 110.6 0.8 9.9e-32 110.4 0.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|452210872|ref|YP_007490986.1| - 3.7e-18 66.3 0.5 7e-13 49.0 0.0 2.6 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|452210872|ref|YP_007490986.1| - 8.9e-15 54.8 6.9 9.5e-12 45.1 0.2 3.5 2 2 2 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|452210872|ref|YP_007490986.1| - 8e-12 44.7 3.3 1.9e-05 23.7 0.2 3.4 4 0 0 4 4 4 3 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452210872|ref|YP_007490986.1| - 6.6e-09 34.7 1.5 0.00012 20.6 0.1 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.2 gi|452210872|ref|YP_007490986.1| - 3.7e-08 32.8 1.4 5.9e-06 25.6 0.0 2.9 2 1 1 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|452210872|ref|YP_007490986.1| - 2.8e-07 30.4 0.1 4.7e-05 23.3 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|452210872|ref|YP_007490986.1| - 9.7e-07 27.9 1.6 0.00012 21.0 0.1 3.6 4 0 0 4 4 4 1 FAD binding domain FAD_binding_3 PF01494.14 gi|452210872|ref|YP_007490986.1| - 1e-06 28.0 0.8 4.2e-05 22.7 0.1 2.4 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 gi|452210872|ref|YP_007490986.1| - 8.2e-06 25.0 2.7 0.0022 17.1 0.1 3.4 4 0 0 4 4 4 1 Thi4 family GIDA PF01134.17 gi|452210872|ref|YP_007490986.1| - 2.7e-05 23.1 9.6 0.0038 16.1 0.1 3.8 3 2 2 5 5 5 2 Glucose inhibited division protein A K_oxygenase PF13434.1 gi|452210872|ref|YP_007490986.1| - 0.00017 20.6 0.7 0.016 14.1 0.0 2.8 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.1 gi|452210872|ref|YP_007490986.1| - 0.00061 19.6 4.4 0.017 14.8 0.1 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.7 gi|452210872|ref|YP_007490986.1| - 0.0033 16.3 3.2 0.75 8.6 0.0 2.8 2 1 0 3 3 3 2 Lycopene cyclase protein FMO-like PF00743.14 gi|452210872|ref|YP_007490986.1| - 0.014 13.5 0.0 0.025 12.7 0.0 1.5 1 1 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.1 gi|452210872|ref|YP_007490986.1| - 0.016 15.4 0.9 0.7 10.1 0.2 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding Trp_halogenase PF04820.9 gi|452210872|ref|YP_007490986.1| - 0.039 12.5 1.8 4 5.9 0.1 3.0 3 0 0 3 3 3 0 Tryptophan halogenase VanW PF04294.8 gi|452210872|ref|YP_007490986.1| - 0.086 12.0 0.0 0.22 10.7 0.0 1.6 2 0 0 2 2 2 0 VanW like protein TP_methylase PF00590.15 gi|452210873|ref|YP_007490987.1| - 5.4e-17 62.1 0.0 6.6e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.8 gi|452210874|ref|YP_007490988.1| - 1.3e-30 104.8 1.0 1.5e-30 104.6 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) Lact-deh-memb PF09330.6 gi|452210874|ref|YP_007490988.1| - 0.052 12.9 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding DUF555 PF04475.7 gi|452210875|ref|YP_007490989.1| - 9.8e-51 169.9 0.1 1.2e-50 169.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.7 gi|452210875|ref|YP_007490989.1| - 0.00063 19.7 0.5 1.2 9.2 0.0 2.3 2 0 0 2 2 2 2 Dodecin Rad50_zn_hook PF04423.9 gi|452210875|ref|YP_007490989.1| - 0.052 13.0 0.1 0.12 11.9 0.1 1.6 1 0 0 1 1 1 0 Rad50 zinc hook motif BON PF04972.12 gi|452210875|ref|YP_007490989.1| - 0.12 12.1 0.8 1.9 8.2 0.0 2.3 2 0 0 2 2 2 0 BON domain PfkB PF00294.19 gi|452210877|ref|YP_007490991.1| - 1.3e-53 182.1 0.0 1.6e-53 181.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HAP2-GCS1 PF10699.4 gi|452210877|ref|YP_007490991.1| - 0.039 13.9 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 Male gamete fusion factor ATP_bind_4 PF01902.12 gi|452210878|ref|YP_007490992.1| - 2.5e-71 239.5 0.1 2.9e-71 239.3 0.1 1.0 1 0 0 1 1 1 1 ATP-binding region AIRC PF00731.15 gi|452210879|ref|YP_007490993.1| - 2.8e-42 143.5 1.1 3.3e-42 143.2 0.7 1.0 1 0 0 1 1 1 1 AIR carboxylase DXP_reductoisom PF02670.11 gi|452210879|ref|YP_007490993.1| - 0.031 14.8 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CM_2 PF01817.16 gi|452210880|ref|YP_007490994.1| - 6.1e-17 61.4 5.2 6.8e-17 61.3 3.6 1.0 1 0 0 1 1 1 1 Chorismate mutase type II FTCD_C PF04961.7 gi|452210880|ref|YP_007490994.1| - 0.015 14.7 0.1 0.016 14.6 0.1 1.0 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase Osmo_CC PF08946.5 gi|452210880|ref|YP_007490994.1| - 0.028 14.4 1.5 0.058 13.4 1.0 1.6 1 0 0 1 1 1 0 Osmosensory transporter coiled coil FtsA PF14450.1 gi|452210880|ref|YP_007490994.1| - 0.11 12.3 0.3 0.19 11.5 0.1 1.5 1 1 0 1 1 1 0 Cell division protein FtsA ING PF12998.2 gi|452210880|ref|YP_007490994.1| - 0.14 12.3 0.8 0.16 12.2 0.6 1.1 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding CENP-H PF05837.7 gi|452210880|ref|YP_007490994.1| - 0.19 11.9 2.5 0.23 11.6 1.7 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) GHMP_kinases_N PF00288.21 gi|452210881|ref|YP_007490995.1| - 8.5e-10 38.5 1.2 8.5e-10 38.5 0.8 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|452210881|ref|YP_007490995.1| - 6.4e-05 23.0 0.2 0.00022 21.3 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal PhoU PF01895.14 gi|452210882|ref|YP_007490996.1| - 3e-25 88.4 5.0 2.8e-13 50.1 0.1 2.4 2 0 0 2 2 2 2 PhoU domain PspA_IM30 PF04012.7 gi|452210882|ref|YP_007490996.1| - 0.088 12.1 0.0 1.4 8.2 0.0 2.2 2 0 0 2 2 2 0 PspA/IM30 family GTP_EFTU PF00009.22 gi|452210884|ref|YP_007490998.1| - 1.1e-16 60.8 1.7 3.7e-07 29.7 0.4 2.6 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.18 gi|452210884|ref|YP_007490998.1| - 3.5e-16 59.1 0.1 5.1e-16 58.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.16 gi|452210884|ref|YP_007490998.1| - 3.7e-06 26.3 0.1 0.013 14.8 0.0 2.4 2 1 0 2 2 2 2 ADP-ribosylation factor family Septin PF00735.13 gi|452210884|ref|YP_007490998.1| - 1.2e-05 24.4 0.1 1.4e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Septin Miro PF08477.8 gi|452210884|ref|YP_007490998.1| - 1.3e-05 25.6 0.1 3.5e-05 24.2 0.1 1.7 1 1 0 1 1 1 1 Miro-like protein DUF258 PF03193.11 gi|452210884|ref|YP_007490998.1| - 0.00031 19.9 0.1 0.00048 19.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 SRPRB PF09439.5 gi|452210884|ref|YP_007490998.1| - 0.00043 19.5 0.0 0.032 13.4 0.0 2.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_17 PF13207.1 gi|452210884|ref|YP_007490998.1| - 0.00072 20.3 0.0 0.0013 19.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain FeoB_N PF02421.13 gi|452210884|ref|YP_007490998.1| - 0.0026 17.0 0.7 0.024 13.9 0.5 2.5 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.1 gi|452210884|ref|YP_007490998.1| - 0.0036 17.6 0.0 0.0057 16.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|452210884|ref|YP_007490998.1| - 0.0045 16.4 0.0 0.0045 16.4 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain Ras PF00071.17 gi|452210884|ref|YP_007490998.1| - 0.0071 15.7 0.1 2.5 7.4 0.0 2.5 2 1 0 2 2 2 1 Ras family AAA_22 PF13401.1 gi|452210884|ref|YP_007490998.1| - 0.0087 16.2 0.0 0.016 15.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.22 gi|452210884|ref|YP_007490998.1| - 0.0094 16.2 0.0 0.013 15.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter PPV_E1_C PF00519.12 gi|452210884|ref|YP_007490998.1| - 0.01 14.4 0.1 0.014 14.0 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_16 PF13191.1 gi|452210884|ref|YP_007490998.1| - 0.011 15.7 0.0 0.013 15.4 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain Arch_ATPase PF01637.13 gi|452210884|ref|YP_007490998.1| - 0.015 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase NB-ARC PF00931.17 gi|452210884|ref|YP_007490998.1| - 0.015 14.1 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA PF00004.24 gi|452210884|ref|YP_007490998.1| - 0.042 14.0 0.1 0.09 12.9 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_35 PF14516.1 gi|452210884|ref|YP_007490998.1| - 0.061 11.9 0.0 0.09 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain cobW PF02492.14 gi|452210884|ref|YP_007490998.1| - 0.073 12.5 0.2 0.74 9.2 0.1 2.3 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.9 gi|452210884|ref|YP_007490998.1| - 0.075 12.7 0.0 0.13 12.0 0.0 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.17 gi|452210884|ref|YP_007490998.1| - 0.075 13.2 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.12 gi|452210884|ref|YP_007490998.1| - 0.077 11.8 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NTPase_1 PF03266.10 gi|452210884|ref|YP_007490998.1| - 0.091 12.4 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_14 PF13173.1 gi|452210884|ref|YP_007490998.1| - 0.1 12.4 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF2073 PF09846.4 gi|452210885|ref|YP_007490999.1| - 3.5e-47 158.3 0.5 4.1e-47 158.1 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) GatB_Yqey PF02637.13 gi|452210885|ref|YP_007490999.1| - 0.0071 16.0 1.1 0.0089 15.7 0.7 1.3 1 1 0 1 1 1 1 GatB domain SIS PF01380.17 gi|452210887|ref|YP_007491001.1| - 7.5e-18 64.4 0.1 1.1e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.1 gi|452210887|ref|YP_007491001.1| - 2.5e-06 27.2 3.6 0.021 14.5 0.1 2.2 1 1 1 2 2 2 2 SIS domain THF_DHG_CYH_C PF02882.14 gi|452210887|ref|YP_007491001.1| - 0.0036 16.3 1.3 0.005 15.9 0.9 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aminotran_1_2 PF00155.16 gi|452210888|ref|YP_007491002.1| - 8.3e-69 232.2 0.0 1e-68 231.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|452210888|ref|YP_007491002.1| - 1.8e-12 47.0 0.0 3.3e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|452210888|ref|YP_007491002.1| - 1.4e-10 40.4 0.0 2.3e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|452210888|ref|YP_007491002.1| - 4.2e-10 38.4 0.1 6.1e-10 37.9 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|452210888|ref|YP_007491002.1| - 1.5e-07 30.9 0.0 2.6e-07 30.1 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DsbD PF02683.10 gi|452210889|ref|YP_007491003.1| - 5.3e-18 65.3 12.5 7.1e-18 64.9 8.7 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|452210889|ref|YP_007491003.1| - 5.7e-10 39.2 13.4 7.9e-10 38.8 9.3 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2910 PF11139.3 gi|452210889|ref|YP_007491003.1| - 0.0013 17.9 9.0 0.0065 15.6 6.3 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2910) DUF3816 PF12822.2 gi|452210889|ref|YP_007491003.1| - 0.056 13.3 0.3 0.056 13.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3816) Connexin_CCC PF10582.4 gi|452210889|ref|YP_007491003.1| - 0.084 12.7 0.0 0.32 10.8 0.0 2.0 1 0 0 1 1 1 0 Gap junction channel protein cysteine-rich domain NOG1 PF06858.9 gi|452210890|ref|YP_007491004.1| - 4.4e-21 74.4 0.0 7.6e-21 73.7 0.0 1.4 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.18 gi|452210890|ref|YP_007491004.1| - 2.6e-19 69.2 0.0 5.9e-19 68.1 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|452210890|ref|YP_007491004.1| - 5.3e-11 42.0 0.0 9e-11 41.2 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Miro PF08477.8 gi|452210890|ref|YP_007491004.1| - 6.5e-09 36.3 0.0 1.1e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 Miro-like protein Arf PF00025.16 gi|452210890|ref|YP_007491004.1| - 6.1e-06 25.5 0.0 3.9e-05 22.9 0.0 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.22 gi|452210890|ref|YP_007491004.1| - 8.1e-05 22.1 0.0 0.0035 16.7 0.0 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.11 gi|452210890|ref|YP_007491004.1| - 0.0051 15.9 0.0 0.0084 15.2 0.0 1.4 1 0 0 1 1 1 1 AIG1 family DUF258 PF03193.11 gi|452210890|ref|YP_007491004.1| - 0.0066 15.6 0.0 0.031 13.4 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF258 ArgK PF03308.11 gi|452210890|ref|YP_007491004.1| - 0.0069 15.1 0.0 0.57 8.9 0.0 2.6 2 1 1 3 3 3 1 ArgK protein AAA_25 PF13481.1 gi|452210890|ref|YP_007491004.1| - 0.16 11.3 1.2 2.1 7.6 0.0 2.8 1 1 1 3 3 3 0 AAA domain HrcA_DNA-bdg PF03444.10 gi|452210891|ref|YP_007491005.1| - 1e-37 127.4 0.3 2.8e-37 125.9 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.23 gi|452210891|ref|YP_007491005.1| - 2.6e-26 91.1 0.6 6.2e-12 45.1 0.2 2.5 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.15 gi|452210891|ref|YP_007491005.1| - 2.9e-07 30.5 0.1 9.8e-07 28.8 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.7 gi|452210891|ref|YP_007491005.1| - 4.1e-06 26.3 0.1 1.1e-05 24.9 0.1 1.8 1 0 0 1 1 1 1 HTH domain Ribosomal_L9_C PF03948.9 gi|452210891|ref|YP_007491005.1| - 0.022 14.8 0.1 0.051 13.6 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain MarR_2 PF12802.2 gi|452210891|ref|YP_007491005.1| - 0.052 13.2 0.0 0.21 11.2 0.0 2.1 2 0 0 2 2 2 0 MarR family Sigma70_r4_2 PF08281.7 gi|452210891|ref|YP_007491005.1| - 0.06 12.8 0.0 0.26 10.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 Vps4_C PF09336.5 gi|452210891|ref|YP_007491005.1| - 0.15 11.9 0.0 0.43 10.5 0.0 1.8 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain PRA-PH PF01503.12 gi|452210892|ref|YP_007491006.1| - 5e-10 39.5 0.1 5.2e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.12 gi|452210892|ref|YP_007491006.1| - 6.6e-05 22.7 1.1 9.2e-05 22.3 0.8 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain FCD PF07729.7 gi|452210892|ref|YP_007491006.1| - 0.022 15.1 0.6 0.034 14.4 0.4 1.4 1 1 0 1 1 1 0 FCD domain CLTH PF10607.4 gi|452210892|ref|YP_007491006.1| - 0.073 12.7 0.5 0.1 12.3 0.4 1.3 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain Aconitase PF00330.15 gi|452210893|ref|YP_007491007.1| - 8.6e-78 261.8 0.0 8.4e-55 186.0 0.0 2.1 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) CxxCxxCC PF03692.10 gi|452210894|ref|YP_007491008.1| - 1.8e-13 50.7 7.6 4.6e-12 46.2 3.6 3.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain ACT PF01842.20 gi|452210895|ref|YP_007491009.1| - 6.6e-07 28.6 0.1 1.8e-06 27.2 0.0 1.8 1 0 0 1 1 1 1 ACT domain NT5C PF06941.7 gi|452210897|ref|YP_007491011.1| - 1.5e-08 34.3 0.0 2.6e-05 23.8 0.0 2.1 1 1 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RDD PF06271.7 gi|452210898|ref|YP_007491012.1| - 3e-23 82.2 6.8 3.5e-23 82.0 4.7 1.0 1 0 0 1 1 1 1 RDD family DUF3792 PF12670.2 gi|452210898|ref|YP_007491012.1| - 0.48 10.3 6.7 0.32 10.8 2.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) PrgI PF12666.2 gi|452210898|ref|YP_007491012.1| - 1.9 8.6 5.9 2.9 8.1 2.2 2.1 2 0 0 2 2 2 0 PrgI family protein DUF373 PF04123.8 gi|452210900|ref|YP_007491014.1| - 2.4e-116 388.5 10.8 2.7e-116 388.3 7.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) PNP_UDP_1 PF01048.15 gi|452210901|ref|YP_007491015.1| - 2.7e-45 154.1 0.1 3.1e-45 153.9 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DEAD PF00270.24 gi|452210902|ref|YP_007491016.1| - 9e-28 96.8 0.0 2.8e-27 95.2 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452210902|ref|YP_007491016.1| - 7.5e-14 51.3 0.0 1.7e-13 50.1 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452210902|ref|YP_007491016.1| - 7.1e-07 29.2 0.0 1.5e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|452210902|ref|YP_007491016.1| - 0.047 12.4 0.0 0.07 11.9 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain Ribosomal_S13_N PF08069.7 gi|452210902|ref|YP_007491016.1| - 0.048 13.5 0.0 0.26 11.1 0.0 2.3 2 0 0 2 2 2 0 Ribosomal S13/S15 N-terminal domain SecA_DEAD PF07517.9 gi|452210902|ref|YP_007491016.1| - 0.089 12.0 0.0 0.16 11.2 0.0 1.5 1 0 0 1 1 1 0 SecA DEAD-like domain DUF3467 PF11950.3 gi|452210903|ref|YP_007491017.1| - 7.1e-15 54.8 0.0 1e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) PCP_red PF08369.5 gi|452210903|ref|YP_007491017.1| - 0.0038 17.0 0.0 0.0092 15.8 0.0 1.5 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit LSM PF01423.17 gi|452210905|ref|YP_007491019.1| - 1e-15 57.0 0.5 1e-15 57.0 0.3 1.0 1 0 0 1 1 1 1 LSM domain B-block_TFIIIC PF04182.7 gi|452210906|ref|YP_007491020.1| - 3.8e-05 23.4 0.2 5.3e-05 22.9 0.1 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.2 gi|452210906|ref|YP_007491020.1| - 0.0028 17.3 0.0 0.017 14.8 0.0 1.9 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 gi|452210906|ref|YP_007491020.1| - 0.021 14.5 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|452210906|ref|YP_007491020.1| - 0.058 13.1 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF374 PF04028.8 gi|452210906|ref|YP_007491020.1| - 0.15 11.2 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF374) Gag_p15 PF08723.5 gi|452210908|ref|YP_007491022.1| - 0.1 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Gag protein p15 Lambda_CIII PF02061.11 gi|452210909|ref|YP_007491023.1| - 0.13 12.2 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Lambda Phage CIII TraG_N PF07916.6 gi|452210910|ref|YP_007491024.1| - 5.7 5.2 10.1 7.3 4.8 7.0 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region ABC_tran PF00005.22 gi|452210911|ref|YP_007491025.1| - 2.3e-56 189.8 1.3 4.7e-28 98.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452210911|ref|YP_007491025.1| - 3.5e-24 86.2 2.9 5e-10 39.8 0.1 4.2 2 2 0 3 3 3 2 AAA domain SMC_N PF02463.14 gi|452210911|ref|YP_007491025.1| - 4e-17 62.1 2.6 3.5e-08 32.9 0.1 2.7 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|452210911|ref|YP_007491025.1| - 1.6e-09 38.3 5.9 6.3e-05 23.3 0.1 2.3 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|452210911|ref|YP_007491025.1| - 4.6e-09 36.5 1.6 0.002 18.1 0.4 2.7 2 1 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.1 gi|452210911|ref|YP_007491025.1| - 5.3e-09 35.8 3.0 0.0042 16.9 0.0 3.6 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.1 gi|452210911|ref|YP_007491025.1| - 1.7e-08 33.8 0.6 0.0014 18.0 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452210911|ref|YP_007491025.1| - 2.5e-08 33.5 0.9 0.015 14.7 0.0 4.1 4 0 0 4 4 4 2 AAA domain IstB_IS21 PF01695.12 gi|452210911|ref|YP_007491025.1| - 2.1e-06 27.2 6.9 0.056 12.8 0.1 4.2 4 0 0 4 4 4 2 IstB-like ATP binding protein DUF258 PF03193.11 gi|452210911|ref|YP_007491025.1| - 1.2e-05 24.5 0.6 0.015 14.5 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|452210911|ref|YP_007491025.1| - 1.4e-05 25.2 9.8 0.0084 16.2 0.3 4.0 2 2 0 2 2 2 2 AAA domain UPF0079 PF02367.12 gi|452210911|ref|YP_007491025.1| - 1.5e-05 24.5 1.2 0.097 12.3 0.0 2.6 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_19 PF13245.1 gi|452210911|ref|YP_007491025.1| - 0.00012 21.8 0.4 0.68 9.7 0.0 3.1 3 0 0 3 3 3 2 Part of AAA domain T2SE PF00437.15 gi|452210911|ref|YP_007491025.1| - 0.00015 20.8 0.5 0.17 10.7 0.1 2.7 2 0 0 2 2 2 2 Type II/IV secretion system protein NACHT PF05729.7 gi|452210911|ref|YP_007491025.1| - 0.00017 21.2 0.2 0.0065 16.1 0.0 2.5 2 0 0 2 2 2 1 NACHT domain AAA_30 PF13604.1 gi|452210911|ref|YP_007491025.1| - 0.00021 20.9 7.6 0.028 13.9 0.1 3.6 2 2 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|452210911|ref|YP_007491025.1| - 0.00029 20.7 2.7 0.92 9.3 0.1 3.3 2 1 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|452210911|ref|YP_007491025.1| - 0.00033 21.4 5.0 0.23 12.2 0.6 3.4 2 2 0 2 2 2 2 AAA domain AAA PF00004.24 gi|452210911|ref|YP_007491025.1| - 0.00041 20.5 6.1 0.37 10.9 0.1 4.1 3 1 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.1 gi|452210911|ref|YP_007491025.1| - 0.00043 18.9 0.4 0.93 7.8 0.0 3.5 3 1 1 4 4 4 1 AAA domain MobB PF03205.9 gi|452210911|ref|YP_007491025.1| - 0.00051 19.7 0.8 0.28 10.8 0.0 3.2 4 0 0 4 4 2 1 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.17 gi|452210911|ref|YP_007491025.1| - 0.00073 19.6 0.0 2 8.5 0.0 2.9 2 0 0 2 2 2 1 RNA helicase NTPase_1 PF03266.10 gi|452210911|ref|YP_007491025.1| - 0.00073 19.2 6.0 0.098 12.3 0.0 3.5 4 0 0 4 4 4 2 NTPase Mg_chelatase PF01078.16 gi|452210911|ref|YP_007491025.1| - 0.00094 18.3 1.0 0.35 9.9 0.0 3.0 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI ABC_ATPase PF09818.4 gi|452210911|ref|YP_007491025.1| - 0.00098 17.8 10.8 0.63 8.5 0.2 4.2 4 1 0 4 4 4 2 Predicted ATPase of the ABC class PhoH PF02562.11 gi|452210911|ref|YP_007491025.1| - 0.0011 18.2 1.1 3.5 6.7 0.1 3.5 3 0 0 3 3 3 0 PhoH-like protein AAA_10 PF12846.2 gi|452210911|ref|YP_007491025.1| - 0.0023 17.4 4.6 0.21 11.0 0.1 3.8 4 0 0 4 4 4 1 AAA-like domain Miro PF08477.8 gi|452210911|ref|YP_007491025.1| - 0.0026 18.2 0.1 0.15 12.5 0.0 2.8 3 0 0 3 3 2 1 Miro-like protein AAA_18 PF13238.1 gi|452210911|ref|YP_007491025.1| - 0.0027 17.9 8.7 0.27 11.5 0.0 3.7 3 1 1 4 4 3 1 AAA domain PduV-EutP PF10662.4 gi|452210911|ref|YP_007491025.1| - 0.0031 17.0 0.5 0.53 9.7 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.1 gi|452210911|ref|YP_007491025.1| - 0.0042 16.9 0.4 8.4 6.3 0.0 3.6 3 0 0 3 3 3 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|452210911|ref|YP_007491025.1| - 0.0057 16.1 0.1 0.68 9.3 0.0 2.5 2 0 0 2 2 2 1 FtsK/SpoIIIE family DLIC PF05783.6 gi|452210911|ref|YP_007491025.1| - 0.0057 15.3 0.3 0.19 10.3 0.0 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) PRK PF00485.13 gi|452210911|ref|YP_007491025.1| - 0.0057 16.2 0.2 1.6 8.2 0.0 3.1 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family AAA_15 PF13175.1 gi|452210911|ref|YP_007491025.1| - 0.011 14.8 0.2 0.011 14.8 0.1 2.7 3 0 0 3 3 3 0 AAA ATPase domain GTP_EFTU PF00009.22 gi|452210911|ref|YP_007491025.1| - 0.016 14.6 0.2 6.3 6.1 0.1 2.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain DUF87 PF01935.12 gi|452210911|ref|YP_007491025.1| - 0.017 14.9 0.2 0.58 9.9 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF87 KaiC PF06745.8 gi|452210911|ref|YP_007491025.1| - 0.02 14.0 5.3 1.2 8.1 0.0 3.7 3 1 0 3 3 3 0 KaiC APS_kinase PF01583.15 gi|452210911|ref|YP_007491025.1| - 0.02 14.5 2.5 0.21 11.2 0.1 2.8 3 0 0 3 3 2 0 Adenylylsulphate kinase AAA_28 PF13521.1 gi|452210911|ref|YP_007491025.1| - 0.021 14.8 2.8 0.36 10.7 0.1 2.7 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.7 gi|452210911|ref|YP_007491025.1| - 0.034 13.2 0.2 4.3 6.3 0.1 2.5 2 0 0 2 2 2 0 Zeta toxin KTI12 PF08433.5 gi|452210911|ref|YP_007491025.1| - 0.04 13.1 0.7 9.3 5.3 0.0 2.8 3 0 0 3 3 2 0 Chromatin associated protein KTI12 AAA_24 PF13479.1 gi|452210911|ref|YP_007491025.1| - 0.043 13.4 0.6 0.45 10.0 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452210911|ref|YP_007491025.1| - 0.045 13.4 1.3 0.15 11.8 0.0 2.4 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) Zot PF05707.7 gi|452210911|ref|YP_007491025.1| - 0.046 13.1 2.0 4.6 6.6 0.0 3.6 4 1 1 5 5 3 0 Zonular occludens toxin (Zot) Sigma54_activ_2 PF14532.1 gi|452210911|ref|YP_007491025.1| - 0.056 13.4 0.1 0.19 11.7 0.0 1.9 2 0 0 2 2 1 0 Sigma-54 interaction domain MMR_HSR1 PF01926.18 gi|452210911|ref|YP_007491025.1| - 0.064 13.2 2.6 9.7 6.1 0.2 2.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase Arch_ATPase PF01637.13 gi|452210911|ref|YP_007491025.1| - 0.098 12.3 7.0 0.48 10.0 0.0 3.4 1 1 0 2 2 2 0 Archaeal ATPase Caps_synth PF05704.7 gi|452210911|ref|YP_007491025.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein G-alpha PF00503.15 gi|452210911|ref|YP_007491025.1| - 0.14 10.8 0.9 0.69 8.5 0.0 2.3 3 0 0 3 3 2 0 G-protein alpha subunit ATP_bind_1 PF03029.12 gi|452210911|ref|YP_007491025.1| - 0.37 10.2 2.4 2.6 7.5 0.0 2.6 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein CbiQ PF02361.11 gi|452210912|ref|YP_007491026.1| - 6.2e-32 110.9 6.2 7.8e-32 110.6 4.3 1.1 1 0 0 1 1 1 1 Cobalt transport protein PigN PF04987.9 gi|452210912|ref|YP_007491026.1| - 0.043 12.4 6.4 0.054 12.1 4.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) CARDB PF07705.6 gi|452210913|ref|YP_007491027.1| - 3.8e-30 103.9 11.0 4.5e-29 100.4 0.7 4.4 5 1 0 5 5 5 2 CARDB PD40 PF07676.7 gi|452210913|ref|YP_007491027.1| - 7.6e-30 102.0 22.2 1e-06 28.2 0.2 9.1 8 1 0 8 8 8 6 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|452210913|ref|YP_007491027.1| - 2.3e-17 62.6 7.8 3.2e-05 22.7 0.0 5.7 2 1 3 5 5 5 4 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.1 gi|452210913|ref|YP_007491027.1| - 3.1e-07 29.1 0.0 0.2 10.0 0.0 3.7 1 1 1 3 3 3 3 Oligogalacturonate lyase fn3 PF00041.16 gi|452210913|ref|YP_007491027.1| - 0.0036 17.3 0.8 0.035 14.2 0.2 3.0 1 1 1 2 2 2 1 Fibronectin type III domain WD40 PF00400.27 gi|452210913|ref|YP_007491027.1| - 0.0066 16.2 7.2 1.4 8.9 0.1 5.6 6 0 0 6 6 6 1 WD domain, G-beta repeat eIF2A PF08662.6 gi|452210913|ref|YP_007491027.1| - 0.018 14.7 0.2 0.95 9.1 0.0 3.3 2 1 2 4 4 4 0 Eukaryotic translation initiation factor eIF2A Transposase_mut PF00872.13 gi|452210914|ref|YP_007491028.1| - 7.6e-71 238.6 1.1 2.9e-69 233.4 0.8 2.0 1 1 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|452210914|ref|YP_007491028.1| - 5.9e-13 48.7 0.0 1e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|452210914|ref|YP_007491028.1| - 0.0017 18.0 0.2 0.0019 17.8 0.1 1.3 1 0 0 1 1 1 1 Transposase DDE_Tnp_IS240 PF13610.1 gi|452210914|ref|YP_007491028.1| - 0.011 15.6 1.2 0.16 11.9 0.8 2.4 1 1 0 1 1 1 0 DDE domain HTH_24 PF13412.1 gi|452210914|ref|YP_007491028.1| - 0.025 13.9 0.1 7 6.1 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DHQ_synthase PF01761.15 gi|452210914|ref|YP_007491028.1| - 0.061 12.2 0.0 0.091 11.6 0.0 1.3 1 0 0 1 1 1 0 3-dehydroquinate synthase Relaxase PF03432.9 gi|452210914|ref|YP_007491028.1| - 0.12 11.7 1.8 5 6.4 0.9 2.1 1 1 1 2 2 2 0 Relaxase/Mobilisation nuclease domain DNA_processg_A PF02481.10 gi|452210914|ref|YP_007491028.1| - 0.13 11.1 0.0 0.18 10.6 0.0 1.2 1 0 0 1 1 1 0 DNA recombination-mediator protein A DUF2769 PF10967.3 gi|452210915|ref|YP_007491029.1| - 1.3e-15 57.3 19.3 3.2e-15 56.1 10.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2769) AMP-binding PF00501.23 gi|452210916|ref|YP_007491030.1| - 3e-105 352.0 0.0 3.6e-105 351.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|452210916|ref|YP_007491030.1| - 8.1e-16 58.7 0.1 1.7e-15 57.7 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT_2 PF13279.1 gi|452210917|ref|YP_007491031.1| - 1.3e-09 38.5 0.0 1.7e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.17 gi|452210917|ref|YP_007491031.1| - 7.7e-09 35.5 0.0 1.7e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Thioesterase superfamily Acyl-ACP_TE PF01643.12 gi|452210917|ref|YP_007491031.1| - 0.00033 19.6 0.0 0.11 11.3 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase LSPR PF06049.7 gi|452210917|ref|YP_007491031.1| - 0.25 10.8 2.9 16 5.4 0.0 3.1 2 0 0 2 2 2 0 Coagulation Factor V LSPD Repeat Cupin_2 PF07883.6 gi|452210918|ref|YP_007491032.1| - 3.6e-16 58.4 0.6 5.6e-16 57.7 0.4 1.2 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.17 gi|452210918|ref|YP_007491032.1| - 5.6e-11 42.1 0.3 8.1e-11 41.6 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|452210918|ref|YP_007491032.1| - 6.2e-11 42.3 0.4 9.6e-11 41.7 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|452210918|ref|YP_007491032.1| - 2.2e-10 40.4 0.0 3.6e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452210918|ref|YP_007491032.1| - 5.7e-05 23.2 0.0 9.2e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain AraC_binding PF02311.14 gi|452210918|ref|YP_007491032.1| - 8.9e-05 22.1 1.0 0.00012 21.8 0.1 1.6 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|452210918|ref|YP_007491032.1| - 0.0013 18.0 0.0 0.0021 17.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.1 gi|452210918|ref|YP_007491032.1| - 0.0025 17.4 1.3 0.0047 16.5 0.9 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.13 gi|452210918|ref|YP_007491032.1| - 0.038 13.6 0.0 0.059 12.9 0.0 1.3 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Cupin_1 PF00190.17 gi|452210918|ref|YP_007491032.1| - 0.04 13.3 0.0 0.074 12.4 0.0 1.5 1 0 0 1 1 1 0 Cupin HTH_37 PF13744.1 gi|452210918|ref|YP_007491032.1| - 0.048 13.4 0.2 0.086 12.6 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Oxidored_FMN PF00724.15 gi|452210919|ref|YP_007491033.1| - 1.8e-79 267.2 0.0 2.1e-79 266.9 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.16 gi|452210919|ref|YP_007491033.1| - 0.0002 20.6 0.1 0.00056 19.2 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.12 gi|452210919|ref|YP_007491033.1| - 0.00054 18.8 0.0 0.00089 18.1 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|452210919|ref|YP_007491033.1| - 0.08 12.0 0.7 0.16 11.1 0.1 1.6 2 0 0 2 2 2 0 Nitronate monooxygenase HMGL-like PF00682.14 gi|452210919|ref|YP_007491033.1| - 0.091 12.4 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 HMGL-like Cytochrom_C_asm PF01578.15 gi|452210920|ref|YP_007491034.1| - 6.8e-28 97.6 12.8 6.8e-28 97.6 8.9 1.9 2 0 0 2 2 2 1 Cytochrome C assembly protein DUF4149 PF13664.1 gi|452210920|ref|YP_007491034.1| - 0.087 12.8 16.7 0.083 12.9 3.9 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4149) YesK PF14150.1 gi|452210920|ref|YP_007491034.1| - 0.11 12.5 0.1 0.11 12.5 0.0 3.3 4 0 0 4 4 4 0 YesK-like protein CcmB PF03379.8 gi|452210921|ref|YP_007491035.1| - 3.5e-35 121.1 18.1 4.1e-35 120.9 12.6 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.19 gi|452210921|ref|YP_007491035.1| - 3.6e-13 49.1 15.1 5.6e-13 48.5 10.5 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_2 PF12679.2 gi|452210921|ref|YP_007491035.1| - 5.1e-12 45.2 17.7 7.9e-12 44.6 12.3 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|452210921|ref|YP_007491035.1| - 1.1e-08 34.5 15.1 1.1e-08 34.5 10.5 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452210921|ref|YP_007491035.1| - 3.6e-08 32.8 19.1 4.6e-08 32.5 13.2 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|452210921|ref|YP_007491035.1| - 0.00037 19.8 17.4 0.00057 19.2 12.0 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|452210922|ref|YP_007491036.1| - 6e-33 114.0 0.0 7e-33 113.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210922|ref|YP_007491036.1| - 3.8e-14 53.3 0.6 1.2e-12 48.3 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|452210922|ref|YP_007491036.1| - 1.5e-07 31.9 0.6 2.5e-07 31.2 0.4 1.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452210922|ref|YP_007491036.1| - 0.00014 21.3 0.2 0.00023 20.6 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|452210922|ref|YP_007491036.1| - 0.00024 19.7 0.0 0.00028 19.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|452210922|ref|YP_007491036.1| - 0.00026 20.7 0.0 0.00029 20.6 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase AAA_15 PF13175.1 gi|452210922|ref|YP_007491036.1| - 0.001 18.2 0.0 0.0065 15.5 0.0 1.9 1 1 0 2 2 2 1 AAA ATPase domain UPF0079 PF02367.12 gi|452210922|ref|YP_007491036.1| - 0.0014 18.2 0.0 0.0042 16.6 0.0 1.8 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_22 PF13401.1 gi|452210922|ref|YP_007491036.1| - 0.0018 18.4 0.2 0.0056 16.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452210922|ref|YP_007491036.1| - 0.0028 17.8 0.1 0.014 15.5 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MutS_V PF00488.16 gi|452210922|ref|YP_007491036.1| - 0.0043 16.4 0.0 0.027 13.8 0.0 1.9 2 0 0 2 2 2 1 MutS domain V AAA_25 PF13481.1 gi|452210922|ref|YP_007491036.1| - 0.0056 16.1 0.0 0.0093 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|452210922|ref|YP_007491036.1| - 0.0089 15.6 0.0 0.018 14.6 0.0 1.4 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|452210922|ref|YP_007491036.1| - 0.0095 16.7 0.1 0.015 16.1 0.1 1.4 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|452210922|ref|YP_007491036.1| - 0.01 15.0 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|452210922|ref|YP_007491036.1| - 0.012 15.6 0.1 0.02 14.9 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.1 gi|452210922|ref|YP_007491036.1| - 0.013 15.4 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|452210922|ref|YP_007491036.1| - 0.017 14.8 0.0 0.042 13.5 0.0 1.7 2 0 0 2 2 2 0 Part of AAA domain NTPase_1 PF03266.10 gi|452210922|ref|YP_007491036.1| - 0.018 14.7 0.1 0.025 14.2 0.0 1.4 1 1 0 1 1 1 0 NTPase SMC_N PF02463.14 gi|452210922|ref|YP_007491036.1| - 0.021 14.0 0.0 0.048 12.8 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.1 gi|452210922|ref|YP_007491036.1| - 0.024 14.2 0.2 0.038 13.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452210922|ref|YP_007491036.1| - 0.024 14.0 0.2 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_14 PF13173.1 gi|452210922|ref|YP_007491036.1| - 0.039 13.8 0.0 0.077 12.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain NACHT PF05729.7 gi|452210922|ref|YP_007491036.1| - 0.049 13.2 0.0 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 NACHT domain cobW PF02492.14 gi|452210922|ref|YP_007491036.1| - 0.055 12.9 0.0 0.15 11.4 0.0 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP-synt_ab PF00006.20 gi|452210922|ref|YP_007491036.1| - 0.058 12.8 0.0 0.073 12.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.1 gi|452210922|ref|YP_007491036.1| - 0.078 13.2 0.3 0.12 12.7 0.2 1.4 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.3 gi|452210922|ref|YP_007491036.1| - 0.096 9.9 0.0 0.13 9.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Rad17 PF03215.10 gi|452210922|ref|YP_007491036.1| - 0.12 11.0 0.0 0.12 11.0 0.0 1.0 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein DUF3784 PF12650.2 gi|452210922|ref|YP_007491036.1| - 0.14 12.1 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) PEPCK_ATP PF01293.15 gi|452210922|ref|YP_007491036.1| - 0.2 10.1 0.3 0.27 9.7 0.2 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase PMSR PF01625.16 gi|452210924|ref|YP_007491038.1| - 8e-64 214.2 0.9 1e-63 213.8 0.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PBP PF01161.15 gi|452210925|ref|YP_007491039.1| - 1.1e-34 119.3 0.0 1.4e-34 119.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein DZR PF12773.2 gi|452210926|ref|YP_007491040.1| - 0.011 15.5 0.6 0.013 15.2 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon YhfH PF14149.1 gi|452210926|ref|YP_007491040.1| - 0.011 15.4 0.2 0.011 15.4 0.1 2.2 1 1 1 2 2 2 0 YhfH-like protein zf-ribbon_3 PF13248.1 gi|452210926|ref|YP_007491040.1| - 0.015 14.5 4.4 0.03 13.5 3.1 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-B_box PF00643.19 gi|452210926|ref|YP_007491040.1| - 0.045 13.6 1.6 0.063 13.1 1.1 1.2 1 0 0 1 1 1 0 B-box zinc finger PolC_DP2 PF03833.8 gi|452210926|ref|YP_007491040.1| - 0.051 11.2 0.3 0.048 11.3 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 C1_2 PF03107.11 gi|452210926|ref|YP_007491040.1| - 0.17 12.0 5.0 0.4 10.8 3.5 1.7 1 1 0 1 1 1 0 C1 domain Nudix_N_2 PF14803.1 gi|452210926|ref|YP_007491040.1| - 0.61 9.8 3.5 1.8 8.3 0.0 2.5 3 0 0 3 3 3 0 Nudix N-terminal Zn-ribbon_8 PF09723.5 gi|452210926|ref|YP_007491040.1| - 0.78 9.7 4.5 6 6.9 0.1 2.4 2 1 0 2 2 2 0 Zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|452210926|ref|YP_007491040.1| - 2.9 7.4 5.9 61 3.2 3.4 2.8 2 1 0 2 2 2 0 A2L zinc ribbon domain C1_3 PF07649.7 gi|452210926|ref|YP_007491040.1| - 9.1 6.4 9.3 0.75 9.8 2.3 2.2 2 1 0 2 2 2 0 C1-like domain DUF362 PF04015.7 gi|452210927|ref|YP_007491041.1| - 1.3e-39 135.8 0.0 1.6e-39 135.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Antitoxin-MazE PF04014.13 gi|452210927|ref|YP_007491041.1| - 0.074 12.8 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 Antidote-toxin recognition MazE TrkA_C PF02080.16 gi|452210928|ref|YP_007491042.1| - 2.2e-28 97.6 0.1 2.9e-13 49.2 0.0 2.6 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.14 gi|452210928|ref|YP_007491042.1| - 2.2e-15 56.8 16.7 2.2e-09 37.6 4.6 2.9 2 1 1 3 3 3 2 PhoU domain PhoU_div PF01865.11 gi|452210928|ref|YP_007491042.1| - 5e-05 22.5 10.1 0.027 13.6 0.9 2.4 2 0 0 2 2 2 2 Protein of unknown function DUF47 MgtE PF01769.11 gi|452210929|ref|YP_007491043.1| - 2.6e-14 53.6 9.3 4.4e-14 52.9 6.5 1.3 1 0 0 1 1 1 1 Divalent cation transporter DUF1616 PF07760.6 gi|452210929|ref|YP_007491043.1| - 0.057 12.5 3.6 0.12 11.5 2.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) YwiC PF14256.1 gi|452210929|ref|YP_007491043.1| - 0.33 11.0 5.0 0.64 10.1 3.5 1.8 1 1 0 1 1 1 0 YwiC-like protein IncA PF04156.9 gi|452210929|ref|YP_007491043.1| - 1.8 8.1 7.0 3.1 7.3 4.9 1.5 1 0 0 1 1 1 0 IncA protein ABC2_membrane_4 PF12730.2 gi|452210929|ref|YP_007491043.1| - 4.5 6.3 19.7 0.35 9.9 9.9 1.7 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF4396 PF14342.1 gi|452210929|ref|YP_007491043.1| - 5.5 7.1 11.5 36 4.4 7.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4396) MgtE PF01769.11 gi|452210930|ref|YP_007491044.1| - 4.1e-20 72.4 7.7 4.1e-20 72.4 5.3 1.5 2 0 0 2 2 2 1 Divalent cation transporter DUF4257 PF14074.1 gi|452210930|ref|YP_007491044.1| - 0.14 11.8 2.9 0.8 9.3 2.0 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4257) DUF4044 PF13253.1 gi|452210933|ref|YP_007491047.1| - 0.63 9.2 3.0 1.3 8.2 2.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Reprolysin_5 PF13688.1 gi|452210934|ref|YP_007491048.1| - 1.3e-21 77.4 10.1 2.2e-21 76.6 7.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.1 gi|452210934|ref|YP_007491048.1| - 3e-06 27.7 3.9 3e-06 27.7 2.7 1.9 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like DUF948 PF06103.6 gi|452210935|ref|YP_007491049.1| - 0.11 12.4 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) AsnC_trans_reg PF01037.16 gi|452210938|ref|YP_007491052.1| - 4.9e-11 42.1 0.2 5.2e-11 42.0 0.2 1.0 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 gi|452210938|ref|YP_007491052.1| - 3.8e-05 23.3 0.1 4.3e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 GYD domain ACT_4 PF13291.1 gi|452210938|ref|YP_007491052.1| - 0.012 15.9 0.1 0.29 11.5 0.1 2.0 2 0 0 2 2 2 0 ACT domain Chlor_dismutase PF06778.7 gi|452210938|ref|YP_007491052.1| - 0.042 13.5 0.1 0.045 13.4 0.1 1.1 1 0 0 1 1 1 0 Chlorite dismutase Med31 PF05669.7 gi|452210940|ref|YP_007491054.1| - 1.2 8.8 7.8 1.3 8.7 5.4 1.2 1 0 0 1 1 1 0 SOH1 Topo-VIb_trans PF09239.6 gi|452210941|ref|YP_007491055.1| - 7.1e-69 230.4 0.0 1.1e-68 229.7 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|452210941|ref|YP_007491055.1| - 1.3e-13 50.6 0.0 4.9e-13 48.7 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|452210941|ref|YP_007491055.1| - 1.1e-09 38.1 0.0 3.7e-09 36.3 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MAF_flag10 PF01973.13 gi|452210941|ref|YP_007491055.1| - 0.009 15.5 0.0 0.022 14.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF115 FbpA PF05833.6 gi|452210941|ref|YP_007491055.1| - 0.028 12.9 1.4 0.039 12.4 0.0 1.8 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) HATPase_c_2 PF13581.1 gi|452210941|ref|YP_007491055.1| - 0.029 14.1 0.0 0.5 10.1 0.0 2.5 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain PFU PF09070.6 gi|452210941|ref|YP_007491055.1| - 0.14 12.1 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 PFU (PLAA family ubiquitin binding) TP6A_N PF04406.9 gi|452210942|ref|YP_007491056.1| - 1.8e-18 65.9 0.2 3.6e-18 64.9 0.1 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DNA_gyraseB PF00204.20 gi|452210943|ref|YP_007491057.1| - 3.1e-63 212.0 0.9 4.7e-63 211.4 0.6 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.16 gi|452210943|ref|YP_007491057.1| - 1.1e-30 105.1 0.1 2.1e-30 104.2 0.0 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.17 gi|452210943|ref|YP_007491057.1| - 2.2e-25 88.5 0.0 4.8e-25 87.4 0.0 1.6 1 0 0 1 1 1 1 Toprim domain HATPase_c PF02518.21 gi|452210943|ref|YP_007491057.1| - 9.1e-19 67.2 0.1 1.6e-18 66.4 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|452210943|ref|YP_007491057.1| - 5.4e-05 22.8 0.0 0.00014 21.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.15 gi|452210944|ref|YP_007491058.1| - 2.1e-157 524.3 0.6 3.1e-157 523.8 0.4 1.2 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.8 gi|452210944|ref|YP_007491058.1| - 1.2e-67 223.0 15.8 1e-17 63.1 0.1 6.6 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller TraG-D_C PF12696.2 gi|452210944|ref|YP_007491058.1| - 0.12 12.1 0.0 0.12 12.1 0.0 2.3 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG HATPase_c_3 PF13589.1 gi|452210945|ref|YP_007491059.1| - 2.4e-13 49.9 0.0 7.5e-13 48.3 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|452210945|ref|YP_007491059.1| - 3.6e-10 39.5 0.0 9.4e-10 38.2 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.17 gi|452210945|ref|YP_007491059.1| - 0.0037 17.2 2.8 0.029 14.3 1.0 2.9 2 1 0 2 2 2 1 HD domain PDEase_I PF00233.14 gi|452210945|ref|YP_007491059.1| - 0.051 13.3 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase DUF457 PF04307.9 gi|452210946|ref|YP_007491060.1| - 1.8e-30 105.3 14.5 2.9e-30 104.6 10.0 1.3 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Sod_Fe_C PF02777.13 gi|452210947|ref|YP_007491061.1| - 2.1e-38 130.4 0.1 3.7e-38 129.5 0.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|452210947|ref|YP_007491061.1| - 2.2e-27 95.1 1.5 3.9e-27 94.3 1.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain EFhand_Ca_insen PF08726.5 gi|452210947|ref|YP_007491061.1| - 0.13 12.3 0.3 0.26 11.2 0.2 1.5 1 0 0 1 1 1 0 Ca2+ insensitive EF hand DUF457 PF04307.9 gi|452210948|ref|YP_007491062.1| - 2.1e-33 114.8 10.9 9.3e-33 112.7 7.5 1.9 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF3816 PF12822.2 gi|452210948|ref|YP_007491062.1| - 0.046 13.6 1.2 0.082 12.7 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3816) DUF2618 PF10940.3 gi|452210948|ref|YP_007491062.1| - 0.14 11.9 0.3 0.32 10.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) PsbK PF02533.10 gi|452210948|ref|YP_007491062.1| - 0.15 12.0 2.7 0.34 10.8 1.9 1.5 1 0 0 1 1 1 0 Photosystem II 4 kDa reaction centre component DUF2626 PF11117.3 gi|452210948|ref|YP_007491062.1| - 0.25 11.7 4.7 0.11 12.9 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2626) DUF457 PF04307.9 gi|452210950|ref|YP_007491064.1| - 2.8e-29 101.4 14.9 7.9e-29 100.0 10.3 1.7 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF1600 PF07667.6 gi|452210950|ref|YP_007491064.1| - 0.016 15.3 2.8 0.016 15.3 1.9 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1600) DLH PF01738.13 gi|452210951|ref|YP_007491065.1| - 7e-34 117.0 0.0 9.8e-32 109.9 0.0 2.1 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_5 PF12695.2 gi|452210951|ref|YP_007491065.1| - 3.2e-18 65.8 0.0 4.6e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|452210951|ref|YP_007491065.1| - 2.7e-11 43.0 0.0 1.4e-06 27.7 0.0 2.5 1 1 1 2 2 2 2 Prolyl oligopeptidase family Chlorophyllase PF07224.6 gi|452210951|ref|YP_007491065.1| - 5.6e-09 35.2 0.0 8.7e-09 34.5 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase Abhydrolase_6 PF12697.2 gi|452210951|ref|YP_007491065.1| - 2.9e-08 33.8 0.0 6.3e-06 26.2 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Chlorophyllase2 PF12740.2 gi|452210951|ref|YP_007491065.1| - 1.2e-07 30.9 0.0 1.9e-07 30.2 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_3 PF07859.8 gi|452210951|ref|YP_007491065.1| - 0.0019 17.8 0.0 0.14 11.6 0.0 2.3 1 1 1 2 2 2 1 alpha/beta hydrolase fold PAF-AH_p_II PF03403.8 gi|452210951|ref|YP_007491065.1| - 0.0031 15.8 0.0 0.053 11.8 0.0 2.0 1 1 1 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Hydrolase_4 PF12146.3 gi|452210951|ref|YP_007491065.1| - 0.013 15.3 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 Putative lysophospholipase BAAT_C PF08840.6 gi|452210951|ref|YP_007491065.1| - 0.02 14.6 0.0 0.08 12.6 0.0 1.8 1 1 1 3 3 3 0 BAAT / Acyl-CoA thioester hydrolase C terminal TPR_8 PF13181.1 gi|452210951|ref|YP_007491065.1| - 0.23 11.3 1.5 0.34 10.8 0.3 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat URO-D PF01208.12 gi|452210953|ref|YP_007491067.1| - 2.1e-72 243.9 0.0 2.4e-72 243.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) B12-binding PF02310.14 gi|452210954|ref|YP_007491068.1| - 8.6e-20 70.8 0.7 1.4e-19 70.1 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452210954|ref|YP_007491068.1| - 4.1e-10 39.5 0.1 1.4e-09 37.8 0.0 1.9 2 0 0 2 2 2 1 B12 binding domain Peripla_BP_6 PF13458.1 gi|452210954|ref|YP_007491068.1| - 0.056 12.7 0.1 0.081 12.2 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein Peripla_BP_4 PF13407.1 gi|452210954|ref|YP_007491068.1| - 0.059 12.7 0.1 0.95 8.7 0.1 2.0 2 0 0 2 2 2 0 Periplasmic binding protein domain DapB_N PF01113.15 gi|452210954|ref|YP_007491068.1| - 0.079 12.8 0.9 0.34 10.8 0.6 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus zf-IS66 PF13005.2 gi|452210955|ref|YP_007491069.1| - 4.8e-11 42.4 5.9 6.5e-11 42.0 4.1 1.2 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 OrfB_Zn_ribbon PF07282.6 gi|452210955|ref|YP_007491069.1| - 0.046 13.3 2.0 0.52 10.0 0.0 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain DZR PF12773.2 gi|452210955|ref|YP_007491069.1| - 0.088 12.6 4.7 0.13 12.0 3.2 1.3 1 1 0 1 1 1 0 Double zinc ribbon Lar_restr_allev PF14354.1 gi|452210955|ref|YP_007491069.1| - 0.094 13.0 2.8 2.7 8.3 0.1 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.1 gi|452210955|ref|YP_007491069.1| - 0.14 12.2 1.8 1.4 8.9 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HypA PF01155.14 gi|452210955|ref|YP_007491069.1| - 0.28 10.8 1.8 0.36 10.5 1.2 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Mut7-C PF01927.11 gi|452210955|ref|YP_007491069.1| - 0.67 9.9 3.4 0.83 9.6 2.4 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.5 gi|452210955|ref|YP_007491069.1| - 0.72 9.8 5.8 6.8 6.7 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.1 gi|452210955|ref|YP_007491069.1| - 0.87 8.8 7.9 0.73 9.1 0.9 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|452210955|ref|YP_007491069.1| - 2.2 7.9 7.3 6 6.6 5.1 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SOR_SNZ PF01680.12 gi|452210957|ref|YP_007491071.1| - 6.3e-108 359.1 8.5 7.2e-108 358.9 5.9 1.0 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|452210957|ref|YP_007491071.1| - 0.0065 15.5 2.4 0.0096 15.0 1.1 1.6 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG SNO PF01174.14 gi|452210958|ref|YP_007491072.1| - 7.8e-54 182.1 0.0 8.8e-54 181.9 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|452210958|ref|YP_007491072.1| - 1.4e-10 40.9 0.0 2.5e-09 36.8 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|452210958|ref|YP_007491072.1| - 2.4e-10 40.2 0.1 3.5e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.12 gi|452210958|ref|YP_007491072.1| - 1.5e-09 37.7 0.0 1.8e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.4 gi|452210958|ref|YP_007491072.1| - 0.00024 20.0 0.0 0.00032 19.6 0.0 1.2 1 0 0 1 1 1 1 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.19 gi|452210958|ref|YP_007491072.1| - 0.0056 16.1 0.0 0.0075 15.7 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.8 gi|452210958|ref|YP_007491072.1| - 0.026 13.9 0.1 0.091 12.1 0.1 2.1 1 1 0 1 1 1 0 Peptidase C26 DUF4066 PF13278.1 gi|452210958|ref|YP_007491072.1| - 0.041 13.1 0.0 0.062 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative amidotransferase DDE_Tnp_IS66 PF03050.9 gi|452210959|ref|YP_007491073.1| - 7.8e-61 205.6 0.5 9.4e-61 205.4 0.3 1.1 1 0 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.1 gi|452210959|ref|YP_007491073.1| - 1.9e-07 31.1 1.5 0.023 14.6 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|452210959|ref|YP_007491073.1| - 0.017 14.6 0.2 0.027 13.9 0.1 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Laminin_II PF06009.7 gi|452210959|ref|YP_007491073.1| - 0.1 12.3 0.2 0.21 11.3 0.1 1.4 1 0 0 1 1 1 0 Laminin Domain II Takusan PF04822.8 gi|452210959|ref|YP_007491073.1| - 0.14 11.9 3.9 0.076 12.7 1.1 1.7 1 1 1 2 2 2 0 Takusan RBD-FIP PF09457.5 gi|452210959|ref|YP_007491073.1| - 0.2 11.4 2.2 1.3 8.9 1.2 2.6 2 1 0 2 2 2 0 FIP domain Pyridox_oxidase PF01243.15 gi|452210960|ref|YP_007491074.1| - 2.2e-15 56.4 0.0 2.6e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase O-antigen_lig PF13425.1 gi|452210961|ref|YP_007491075.1| - 6.2e-05 23.0 0.6 0.00012 22.0 0.2 1.5 1 1 1 2 2 2 1 O-antigen ligase like membrane protein PPC PF04151.10 gi|452210961|ref|YP_007491075.1| - 0.012 16.6 0.4 0.012 16.6 0.3 2.0 1 1 1 2 2 2 0 Bacterial pre-peptidase C-terminal domain DUF2957 PF11170.3 gi|452210961|ref|YP_007491075.1| - 0.014 14.0 0.1 0.017 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2957) HTH_24 PF13412.1 gi|452210962|ref|YP_007491076.1| - 2.6e-17 61.9 1.2 9.2e-09 34.5 0.4 2.6 3 0 0 3 3 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|452210962|ref|YP_007491076.1| - 5.7e-14 51.6 0.0 2e-06 27.5 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210962|ref|YP_007491076.1| - 1.9e-10 40.1 0.0 0.00023 20.7 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|452210962|ref|YP_007491076.1| - 3.9e-09 36.0 0.2 0.00023 20.7 0.1 2.4 2 0 0 2 2 2 2 HTH domain MarR PF01047.17 gi|452210962|ref|YP_007491076.1| - 1.2e-07 31.2 0.1 0.0034 17.0 0.0 2.8 3 0 0 3 3 2 2 MarR family HTH_Crp_2 PF13545.1 gi|452210962|ref|YP_007491076.1| - 2.3e-07 30.4 0.1 0.0011 18.7 0.0 2.4 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain HTH_34 PF13601.1 gi|452210962|ref|YP_007491076.1| - 1.1e-06 28.6 0.0 0.0021 18.0 0.0 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_28 PF13518.1 gi|452210962|ref|YP_007491076.1| - 2.7e-06 27.2 0.2 0.0047 16.9 0.1 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain TrmB PF01978.14 gi|452210962|ref|YP_007491076.1| - 4e-06 26.4 0.1 0.0022 17.6 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.1 gi|452210962|ref|YP_007491076.1| - 6.8e-06 25.6 0.0 0.0052 16.3 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_36 PF13730.1 gi|452210962|ref|YP_007491076.1| - 1.2e-05 25.3 0.2 0.023 14.8 0.1 3.2 2 1 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.14 gi|452210962|ref|YP_007491076.1| - 1.6e-05 24.1 0.4 0.057 12.7 0.1 2.7 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family FaeA PF04703.7 gi|452210962|ref|YP_007491076.1| - 3.3e-05 23.9 0.3 0.34 11.1 0.0 2.3 2 0 0 2 2 2 2 FaeA-like protein Penicillinase_R PF03965.11 gi|452210962|ref|YP_007491076.1| - 4.4e-05 23.5 0.2 0.021 14.9 0.0 2.3 1 1 1 2 2 2 1 Penicillinase repressor MarR_2 PF12802.2 gi|452210962|ref|YP_007491076.1| - 4.5e-05 23.0 0.0 0.16 11.6 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_IclR PF09339.5 gi|452210962|ref|YP_007491076.1| - 0.0001 21.7 0.0 0.24 11.0 0.0 2.4 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_38 PF13936.1 gi|452210962|ref|YP_007491076.1| - 0.00013 21.3 0.0 0.064 12.8 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|452210962|ref|YP_007491076.1| - 0.00022 20.5 0.1 0.77 9.2 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TetR_N PF00440.18 gi|452210962|ref|YP_007491076.1| - 0.00023 20.7 0.0 0.15 11.7 0.0 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.11 gi|452210962|ref|YP_007491076.1| - 0.00033 19.8 0.0 1 8.6 0.0 3.2 2 1 1 3 3 3 2 Sigma-70, region 4 HTH_23 PF13384.1 gi|452210962|ref|YP_007491076.1| - 0.0004 19.9 0.0 0.083 12.5 0.0 2.6 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.7 gi|452210962|ref|YP_007491076.1| - 0.0011 18.3 0.0 0.096 12.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_10 PF04967.7 gi|452210962|ref|YP_007491076.1| - 0.0015 18.1 0.0 1.6 8.3 0.0 2.5 2 0 0 2 2 2 1 HTH DNA binding domain MerR_1 PF13411.1 gi|452210962|ref|YP_007491076.1| - 0.002 17.8 0.2 0.15 11.8 0.0 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_Tnp_IS630 PF01710.11 gi|452210962|ref|YP_007491076.1| - 0.0023 17.5 0.0 0.39 10.4 0.0 2.3 1 1 1 2 2 2 1 Transposase NUMOD1 PF07453.8 gi|452210962|ref|YP_007491076.1| - 0.0029 17.3 1.5 2.3 8.1 0.0 3.3 3 0 0 3 3 3 1 NUMOD1 domain RepL PF05732.6 gi|452210962|ref|YP_007491076.1| - 0.006 15.8 0.5 0.041 13.1 0.1 2.1 1 1 0 2 2 2 1 Firmicute plasmid replication protein (RepL) KorB PF08535.5 gi|452210962|ref|YP_007491076.1| - 0.011 15.8 0.0 0.22 11.7 0.0 2.5 3 0 0 3 3 2 0 KorB domain GntR PF00392.16 gi|452210962|ref|YP_007491076.1| - 0.011 15.1 0.0 0.38 10.2 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_29 PF13551.1 gi|452210962|ref|YP_007491076.1| - 0.014 15.5 0.0 5.4 7.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix Fe_dep_repress PF01325.14 gi|452210962|ref|YP_007491076.1| - 0.016 15.1 0.0 1.4 8.8 0.0 2.4 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_17 PF12728.2 gi|452210962|ref|YP_007491076.1| - 0.023 14.9 0.3 0.75 10.1 0.1 2.6 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_3 PF01381.17 gi|452210962|ref|YP_007491076.1| - 0.024 14.4 0.1 0.093 12.5 0.0 2.0 2 1 1 3 3 1 0 Helix-turn-helix Crp PF00325.15 gi|452210962|ref|YP_007491076.1| - 0.025 14.0 0.0 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family HTH_45 PF14947.1 gi|452210962|ref|YP_007491076.1| - 0.027 14.2 2.4 0.25 11.1 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix HTH_AsnC-type PF13404.1 gi|452210962|ref|YP_007491076.1| - 0.031 13.8 0.0 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Mrr_N PF14338.1 gi|452210962|ref|YP_007491076.1| - 0.04 14.0 0.0 0.071 13.2 0.0 1.4 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_30 PF13556.1 gi|452210962|ref|YP_007491076.1| - 0.072 12.6 0.0 1 8.9 0.0 2.4 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain DUF2250 PF10007.4 gi|452210962|ref|YP_007491076.1| - 0.086 12.7 0.1 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Phage_CI_repr PF07022.8 gi|452210962|ref|YP_007491076.1| - 0.091 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_19 PF12844.2 gi|452210962|ref|YP_007491076.1| - 0.1 12.6 1.5 2.8 8.0 0.1 2.5 1 1 1 2 2 2 0 Helix-turn-helix domain DsbD PF02683.10 gi|452210964|ref|YP_007491078.1| - 1.7e-10 40.8 5.3 1.9e-10 40.7 3.7 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF4137 PF13593.1 gi|452210964|ref|YP_007491078.1| - 0.077 12.0 1.3 0.084 11.9 0.9 1.0 1 0 0 1 1 1 0 SBF-like CPA transporter family (DUF4137) DUF204 PF02659.10 gi|452210964|ref|YP_007491078.1| - 0.097 12.8 2.4 0.12 12.4 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF DUF2627 PF11118.3 gi|452210964|ref|YP_007491078.1| - 0.34 11.0 6.2 2.9 8.0 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) HTH_24 PF13412.1 gi|452210965|ref|YP_007491079.1| - 1.1e-17 63.1 0.2 5.1e-10 38.5 0.4 2.7 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|452210965|ref|YP_007491079.1| - 5.6e-13 48.4 0.0 2.2e-05 24.1 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.15 gi|452210965|ref|YP_007491079.1| - 8.5e-10 38.1 0.0 6.7e-05 22.4 0.0 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|452210965|ref|YP_007491079.1| - 3e-08 33.1 0.1 0.01 15.4 0.1 2.6 2 0 0 2 2 2 2 HTH domain HTH_36 PF13730.1 gi|452210965|ref|YP_007491079.1| - 1.9e-07 31.0 0.3 0.0052 16.8 0.2 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain TrmB PF01978.14 gi|452210965|ref|YP_007491079.1| - 1.2e-06 28.1 0.1 0.0051 16.4 0.0 2.6 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.1 gi|452210965|ref|YP_007491079.1| - 3e-06 26.9 0.1 0.0024 17.6 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.5 gi|452210965|ref|YP_007491079.1| - 3.3e-06 26.5 0.0 0.032 13.8 0.0 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain GerE PF00196.14 gi|452210965|ref|YP_007491079.1| - 1.1e-05 24.6 0.6 0.0082 15.4 0.1 2.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family FaeA PF04703.7 gi|452210965|ref|YP_007491079.1| - 1.5e-05 25.0 0.4 0.13 12.4 0.0 2.4 2 0 0 2 2 2 2 FaeA-like protein MarR_2 PF12802.2 gi|452210965|ref|YP_007491079.1| - 2.6e-05 23.7 0.0 0.038 13.6 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_10 PF04967.7 gi|452210965|ref|YP_007491079.1| - 8.6e-05 22.0 0.0 0.41 10.2 0.0 2.7 2 0 0 2 2 2 2 HTH DNA binding domain HTH_28 PF13518.1 gi|452210965|ref|YP_007491079.1| - 0.0001 22.2 0.4 0.053 13.5 0.1 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|452210965|ref|YP_007491079.1| - 0.00019 20.9 0.0 0.57 9.9 0.0 2.7 2 0 0 2 2 2 2 Homeodomain-like domain RepL PF05732.6 gi|452210965|ref|YP_007491079.1| - 0.00055 19.1 0.9 0.013 14.7 0.4 2.4 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) Penicillinase_R PF03965.11 gi|452210965|ref|YP_007491079.1| - 0.00067 19.7 0.4 0.025 14.6 0.0 2.5 1 1 1 2 2 2 1 Penicillinase repressor HTH_34 PF13601.1 gi|452210965|ref|YP_007491079.1| - 0.00067 19.6 0.0 0.43 10.6 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_41 PF14502.1 gi|452210965|ref|YP_007491079.1| - 0.00091 18.7 0.0 0.07 12.7 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|452210965|ref|YP_007491079.1| - 0.0011 18.7 2.9 0.48 10.3 0.0 3.2 3 0 0 3 3 3 1 B-block binding subunit of TFIIIC TetR_N PF00440.18 gi|452210965|ref|YP_007491079.1| - 0.0013 18.3 0.0 0.26 10.9 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family MarR PF01047.17 gi|452210965|ref|YP_007491079.1| - 0.0013 18.3 0.0 0.32 10.7 0.0 2.6 2 1 0 2 2 2 1 MarR family Rrf2 PF02082.15 gi|452210965|ref|YP_007491079.1| - 0.0025 17.9 0.1 3.8 7.6 0.0 3.3 3 1 0 3 3 3 0 Transcriptional regulator MerR_1 PF13411.1 gi|452210965|ref|YP_007491079.1| - 0.0037 17.0 0.4 3.3 7.5 0.0 2.4 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_Tnp_IS630 PF01710.11 gi|452210965|ref|YP_007491079.1| - 0.0037 16.9 0.1 0.21 11.2 0.0 2.4 1 1 1 2 2 2 1 Transposase HTH_45 PF14947.1 gi|452210965|ref|YP_007491079.1| - 0.0039 16.9 1.1 0.16 11.8 0.2 3.1 2 1 1 3 3 3 1 Winged helix-turn-helix HTH_29 PF13551.1 gi|452210965|ref|YP_007491079.1| - 0.0059 16.7 0.0 2.2 8.4 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn helix Sigma70_r4_2 PF08281.7 gi|452210965|ref|YP_007491079.1| - 0.0064 15.9 0.0 1.4 8.4 0.0 2.7 2 0 0 2 2 2 1 Sigma-70, region 4 DUF2250 PF10007.4 gi|452210965|ref|YP_007491079.1| - 0.0066 16.3 0.2 0.025 14.4 0.1 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_AsnC-type PF13404.1 gi|452210965|ref|YP_007491079.1| - 0.011 15.2 0.0 1.9 8.0 0.0 2.5 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain LacI PF00356.16 gi|452210965|ref|YP_007491079.1| - 0.012 15.2 0.1 1.5 8.4 0.0 3.4 4 0 0 4 4 3 0 Bacterial regulatory proteins, lacI family Phage_CI_repr PF07022.8 gi|452210965|ref|YP_007491079.1| - 0.012 15.6 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Fe_dep_repress PF01325.14 gi|452210965|ref|YP_007491079.1| - 0.013 15.4 0.0 0.075 12.9 0.0 2.1 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Mrr_N PF14338.1 gi|452210965|ref|YP_007491079.1| - 0.042 13.9 0.1 0.11 12.6 0.1 1.7 1 1 0 1 1 1 0 Mrr N-terminal domain HrcA_DNA-bdg PF03444.10 gi|452210965|ref|YP_007491079.1| - 0.046 13.1 0.2 0.35 10.3 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_17 PF12728.2 gi|452210965|ref|YP_007491079.1| - 0.048 13.9 0.3 2.9 8.2 0.1 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain NUMOD1 PF07453.8 gi|452210965|ref|YP_007491079.1| - 0.049 13.5 2.0 9 6.3 0.0 3.7 4 0 0 4 4 3 0 NUMOD1 domain HTH_3 PF01381.17 gi|452210965|ref|YP_007491079.1| - 0.069 13.0 0.0 0.45 10.3 0.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix HTH_27 PF13463.1 gi|452210965|ref|YP_007491079.1| - 0.07 13.4 0.0 0.31 11.3 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain Sulfolobus_pRN PF05584.6 gi|452210965|ref|YP_007491079.1| - 0.077 12.9 4.6 0.61 10.1 0.1 3.2 3 1 1 4 4 3 0 Sulfolobus plasmid regulatory protein KorB PF08535.5 gi|452210965|ref|YP_007491079.1| - 0.089 12.9 0.0 3.8 7.7 0.0 2.3 2 0 0 2 2 2 0 KorB domain GH97_C PF14509.1 gi|452210965|ref|YP_007491079.1| - 0.098 12.7 0.3 0.37 10.9 0.1 1.9 1 1 1 2 2 2 0 Glycosyl-hydrolase 97 C-terminal, oligomerisation YmgB PF10798.3 gi|452210965|ref|YP_007491079.1| - 0.26 11.1 1.7 0.66 9.8 0.3 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR HTH_19 PF12844.2 gi|452210965|ref|YP_007491079.1| - 1.6 8.8 7.5 8.1 6.5 0.1 3.6 4 1 1 5 5 3 0 Helix-turn-helix domain Transposase_mut PF00872.13 gi|452210968|ref|YP_007491082.1| - 9.4e-91 304.1 0.2 1.3e-90 303.7 0.1 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|452210968|ref|YP_007491082.1| - 3.5e-13 49.5 0.0 7e-13 48.5 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|452210968|ref|YP_007491082.1| - 2.8e-05 23.5 0.4 6.6e-05 22.2 0.3 1.5 1 1 0 1 1 1 1 Transposase IS66 family DDE_Tnp_ISL3 PF01610.12 gi|452210968|ref|YP_007491082.1| - 0.00033 20.3 0.8 0.0051 16.4 0.1 2.1 1 1 1 2 2 2 1 Transposase CobN-Mg_chel PF02514.11 gi|452210968|ref|YP_007491082.1| - 0.014 12.8 0.1 0.3 8.4 0.0 2.2 2 0 0 2 2 2 0 CobN/Magnesium Chelatase HTH_24 PF13412.1 gi|452210968|ref|YP_007491082.1| - 0.018 14.4 0.1 3.9 6.9 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HipA_C PF07804.7 gi|452210968|ref|YP_007491082.1| - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 1 0 0 1 1 1 0 HipA-like C-terminal domain DUF3108 PF11306.3 gi|452210969|ref|YP_007491083.1| - 0.053 13.1 1.2 0.15 11.6 0.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3108) Thioredoxin_3 PF13192.1 gi|452210970|ref|YP_007491084.1| - 9.8e-13 47.7 0.3 9.8e-13 47.7 0.2 1.6 2 0 0 2 2 2 1 Thioredoxin domain DsbD PF02683.10 gi|452210970|ref|YP_007491084.1| - 1.3e-06 28.1 1.7 3e-06 26.9 0.9 1.5 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF836 PF05768.9 gi|452210970|ref|YP_007491084.1| - 0.0084 16.3 0.2 0.016 15.4 0.1 1.5 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) UPF0270 PF06794.7 gi|452210970|ref|YP_007491084.1| - 0.01 15.5 2.2 0.017 14.8 1.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) Thioredoxin PF00085.15 gi|452210970|ref|YP_007491084.1| - 0.021 14.4 0.1 0.034 13.8 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin Glutaredoxin PF00462.19 gi|452210970|ref|YP_007491084.1| - 0.024 14.6 0.5 0.05 13.5 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin RNR_N PF08343.5 gi|452210970|ref|YP_007491084.1| - 0.32 10.8 2.0 0.64 9.8 1.4 1.5 1 0 0 1 1 1 0 Ribonucleotide reductase N-terminal DsbD_2 PF13386.1 gi|452210970|ref|YP_007491084.1| - 0.89 9.2 8.4 0.44 10.2 0.5 2.2 1 1 1 2 2 2 0 Cytochrome C biogenesis protein transmembrane region DsbD PF02683.10 gi|452210971|ref|YP_007491085.1| - 0.00043 19.9 3.2 0.00045 19.8 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|452210971|ref|YP_007491085.1| - 0.11 12.2 1.0 0.12 12.0 0.7 1.0 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region DUF2627 PF11118.3 gi|452210971|ref|YP_007491085.1| - 1.2 9.2 5.7 6.9 6.8 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) Yip1 PF04893.12 gi|452210972|ref|YP_007491086.1| - 1.2e-33 115.9 16.5 1.5e-33 115.6 11.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|452210972|ref|YP_007491086.1| - 1.7e-05 24.5 17.0 0.00019 21.1 11.7 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) DUF4181 PF13789.1 gi|452210972|ref|YP_007491086.1| - 1.2 9.1 11.6 0.73 9.7 3.2 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4181) DUF2937 PF11157.3 gi|452210972|ref|YP_007491086.1| - 3.7 6.8 5.8 3.8 6.8 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) ABC2_membrane PF01061.19 gi|452210973|ref|YP_007491087.1| - 3.2e-36 124.4 24.2 3.2e-36 124.4 16.8 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|452210973|ref|YP_007491087.1| - 8.2e-16 57.9 33.1 1e-15 57.6 22.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|452210973|ref|YP_007491087.1| - 1.8e-07 30.3 23.1 3.5e-07 29.3 16.0 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452210973|ref|YP_007491087.1| - 1.5e-06 27.5 28.2 1.7e-06 27.4 19.2 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|452210974|ref|YP_007491088.1| - 1.1e-32 113.1 0.0 2e-32 112.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452210974|ref|YP_007491088.1| - 5.7e-14 52.7 1.5 1.3e-11 45.0 0.3 2.5 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|452210974|ref|YP_007491088.1| - 1.4e-05 24.3 0.0 0.0064 15.5 0.0 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|452210974|ref|YP_007491088.1| - 2.2e-05 24.8 0.0 3.3e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|452210974|ref|YP_007491088.1| - 2.4e-05 24.7 0.0 5.5e-05 23.6 0.0 1.6 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_29 PF13555.1 gi|452210974|ref|YP_007491088.1| - 2.8e-05 23.5 0.1 5.3e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|452210974|ref|YP_007491088.1| - 0.0013 18.2 0.0 1 8.7 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DUF258 PF03193.11 gi|452210974|ref|YP_007491088.1| - 0.018 14.2 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|452210974|ref|YP_007491088.1| - 0.034 13.3 0.0 2.1 7.4 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Chordopox_L2 PF05803.7 gi|452210974|ref|YP_007491088.1| - 0.047 13.3 0.0 0.52 9.9 0.0 2.2 2 0 0 2 2 2 0 Chordopoxvirus L2 protein AAA PF00004.24 gi|452210974|ref|YP_007491088.1| - 0.048 13.8 0.0 0.52 10.5 0.0 2.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.17 gi|452210974|ref|YP_007491088.1| - 0.052 12.9 0.0 0.27 10.6 0.0 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_22 PF13401.1 gi|452210974|ref|YP_007491088.1| - 0.078 13.1 0.1 0.3 11.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|452210974|ref|YP_007491088.1| - 0.08 12.9 0.4 0.3 11.0 0.3 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.22 gi|452210975|ref|YP_007491089.1| - 1e-54 184.5 0.0 7.9e-29 100.7 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.7 gi|452210975|ref|YP_007491089.1| - 6.9e-21 74.3 0.0 7.6e-18 64.6 0.0 2.4 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|452210975|ref|YP_007491089.1| - 1.6e-18 67.7 0.3 1.3e-05 25.3 0.0 4.1 3 1 0 3 3 3 3 AAA domain SMC_N PF02463.14 gi|452210975|ref|YP_007491089.1| - 1.2e-16 60.6 0.1 2e-08 33.7 0.0 3.0 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|452210975|ref|YP_007491089.1| - 6.7e-13 48.9 1.3 1.4e-05 25.2 0.1 3.7 2 2 0 2 2 2 2 AAA domain AAA_25 PF13481.1 gi|452210975|ref|YP_007491089.1| - 4.5e-10 39.2 0.1 0.00091 18.6 0.0 3.5 3 1 0 3 3 3 2 AAA domain AAA_29 PF13555.1 gi|452210975|ref|YP_007491089.1| - 1.2e-08 34.3 0.2 0.00097 18.6 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MobB PF03205.9 gi|452210975|ref|YP_007491089.1| - 1.2e-07 31.4 0.1 0.0017 18.0 0.0 2.4 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|452210975|ref|YP_007491089.1| - 4.8e-07 29.9 0.9 0.013 15.5 0.0 2.8 2 1 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 gi|452210975|ref|YP_007491089.1| - 5e-07 30.0 0.0 0.022 15.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|452210975|ref|YP_007491089.1| - 5.3e-07 30.4 0.0 0.0059 17.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA PF00004.24 gi|452210975|ref|YP_007491089.1| - 2.1e-06 27.9 0.9 0.033 14.3 0.1 3.9 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 gi|452210975|ref|YP_007491089.1| - 2.3e-06 27.3 0.2 0.058 13.0 0.0 3.1 4 0 0 4 4 3 2 NACHT domain DUF258 PF03193.11 gi|452210975|ref|YP_007491089.1| - 3.6e-06 26.2 0.3 0.012 14.7 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|452210975|ref|YP_007491089.1| - 5.9e-06 26.7 0.1 0.12 12.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_10 PF12846.2 gi|452210975|ref|YP_007491089.1| - 7.1e-06 25.6 4.4 0.086 12.2 0.1 4.0 3 1 1 4 4 4 1 AAA-like domain AAA_33 PF13671.1 gi|452210975|ref|YP_007491089.1| - 7.4e-06 25.8 0.0 0.061 13.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 gi|452210975|ref|YP_007491089.1| - 8.8e-06 25.2 0.9 0.44 9.9 0.0 4.0 4 0 0 4 4 4 1 IstB-like ATP binding protein DUF87 PF01935.12 gi|452210975|ref|YP_007491089.1| - 1.2e-05 25.2 0.7 0.0037 17.1 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function DUF87 T2SE PF00437.15 gi|452210975|ref|YP_007491089.1| - 2e-05 23.6 0.2 0.011 14.6 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein KaiC PF06745.8 gi|452210975|ref|YP_007491089.1| - 2.2e-05 23.6 2.2 2.1 7.4 0.1 3.2 3 0 0 3 3 3 2 KaiC AAA_19 PF13245.1 gi|452210975|ref|YP_007491089.1| - 3.2e-05 23.5 0.6 0.058 13.1 0.0 2.9 3 0 0 3 3 2 1 Part of AAA domain NB-ARC PF00931.17 gi|452210975|ref|YP_007491089.1| - 4.3e-05 22.5 0.6 0.25 10.1 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain APS_kinase PF01583.15 gi|452210975|ref|YP_007491089.1| - 5.3e-05 22.9 0.0 0.085 12.5 0.0 2.5 2 0 0 2 2 2 2 Adenylylsulphate kinase AAA_5 PF07728.9 gi|452210975|ref|YP_007491089.1| - 6.7e-05 22.6 0.1 0.61 9.8 0.0 3.3 4 0 0 4 4 3 2 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.13 gi|452210975|ref|YP_007491089.1| - 8.7e-05 22.0 0.1 0.051 13.0 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family Mg_chelatase PF01078.16 gi|452210975|ref|YP_007491089.1| - 9.2e-05 21.6 0.0 0.29 10.2 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI DEAD PF00270.24 gi|452210975|ref|YP_007491089.1| - 0.00016 21.2 0.0 0.56 9.6 0.0 3.1 2 2 0 2 2 2 1 DEAD/DEAH box helicase PRK PF00485.13 gi|452210975|ref|YP_007491089.1| - 0.00017 21.2 0.0 0.071 12.6 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family UPF0079 PF02367.12 gi|452210975|ref|YP_007491089.1| - 0.00071 19.2 0.2 1.2 8.7 0.0 2.7 2 1 1 3 3 3 1 Uncharacterised P-loop hydrolase UPF0079 AAA_14 PF13173.1 gi|452210975|ref|YP_007491089.1| - 0.00077 19.3 0.1 1 9.2 0.0 3.8 3 1 0 3 3 3 1 AAA domain Zeta_toxin PF06414.7 gi|452210975|ref|YP_007491089.1| - 0.00081 18.5 0.1 0.1 11.6 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin NTPase_1 PF03266.10 gi|452210975|ref|YP_007491089.1| - 0.0013 18.5 1.5 1.6 8.4 0.1 3.0 3 0 0 3 3 3 2 NTPase PhoH PF02562.11 gi|452210975|ref|YP_007491089.1| - 0.0013 18.0 0.0 1.4 8.1 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_31 PF13614.1 gi|452210975|ref|YP_007491089.1| - 0.0019 18.1 0.0 0.11 12.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.17 gi|452210975|ref|YP_007491089.1| - 0.0019 18.3 0.0 0.52 10.5 0.0 2.5 2 0 0 2 2 2 1 RNA helicase ATP-synt_ab PF00006.20 gi|452210975|ref|YP_007491089.1| - 0.0029 17.1 0.1 1.2 8.5 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.17 gi|452210975|ref|YP_007491089.1| - 0.0032 16.9 0.6 0.092 12.1 0.0 2.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Sigma54_activat PF00158.21 gi|452210975|ref|YP_007491089.1| - 0.0044 16.5 0.2 1.6 8.2 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_30 PF13604.1 gi|452210975|ref|YP_007491089.1| - 0.0054 16.3 0.1 1 8.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|452210975|ref|YP_007491089.1| - 0.0068 15.4 0.1 9.7 5.1 0.0 3.2 3 0 0 3 3 3 0 AAA ATPase domain Pox_A32 PF04665.7 gi|452210975|ref|YP_007491089.1| - 0.0069 15.7 0.2 2 7.6 0.0 2.4 2 0 0 2 2 2 1 Poxvirus A32 protein MMR_HSR1 PF01926.18 gi|452210975|ref|YP_007491089.1| - 0.0086 16.0 0.2 0.66 9.9 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase ResIII PF04851.10 gi|452210975|ref|YP_007491089.1| - 0.0097 15.7 0.0 3.9 7.2 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit CbiA PF01656.18 gi|452210975|ref|YP_007491089.1| - 0.01 15.2 1.0 0.91 8.8 0.1 2.5 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_ATPase PF09818.4 gi|452210975|ref|YP_007491089.1| - 0.013 14.1 4.4 6 5.3 0.0 4.2 4 1 0 4 4 4 0 Predicted ATPase of the ABC class Miro PF08477.8 gi|452210975|ref|YP_007491089.1| - 0.013 15.9 0.1 3 8.3 0.0 2.3 2 0 0 2 2 2 0 Miro-like protein SbcCD_C PF13558.1 gi|452210975|ref|YP_007491089.1| - 0.016 15.1 1.8 7 6.6 0.1 3.2 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF2075 PF09848.4 gi|452210975|ref|YP_007491089.1| - 0.026 13.5 0.2 1.3 7.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.1 gi|452210975|ref|YP_007491089.1| - 0.037 13.6 0.4 7.5 6.0 0.1 2.4 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|452210975|ref|YP_007491089.1| - 0.037 13.5 0.6 4 6.9 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TIP49 PF06068.8 gi|452210975|ref|YP_007491089.1| - 0.062 12.0 0.1 1.8 7.1 0.0 2.2 2 0 0 2 2 2 0 TIP49 C-terminus Sigma54_activ_2 PF14532.1 gi|452210975|ref|YP_007491089.1| - 0.064 13.2 0.4 3.6 7.6 0.0 2.7 2 1 0 2 2 2 0 Sigma-54 interaction domain RecA PF00154.16 gi|452210975|ref|YP_007491089.1| - 0.069 12.2 0.7 2.4 7.1 0.1 2.4 2 0 0 2 2 2 0 recA bacterial DNA recombination protein TrwB_AAD_bind PF10412.4 gi|452210975|ref|YP_007491089.1| - 0.097 11.2 0.1 3.2 6.2 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain cobW PF02492.14 gi|452210975|ref|YP_007491089.1| - 0.11 11.9 1.2 6.6 6.1 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Thymidylate_kin PF02223.12 gi|452210975|ref|YP_007491089.1| - 0.11 11.8 0.0 4 6.7 0.0 2.3 2 0 0 2 2 2 0 Thymidylate kinase DUF927 PF06048.6 gi|452210975|ref|YP_007491089.1| - 0.17 11.1 0.1 18 4.5 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF927) Arch_ATPase PF01637.13 gi|452210975|ref|YP_007491089.1| - 0.18 11.4 0.1 9.6 5.8 0.0 2.7 3 0 0 3 3 2 0 Archaeal ATPase BPD_transp_1 PF00528.17 gi|452210976|ref|YP_007491090.1| - 2e-26 92.6 11.5 2e-26 92.6 8.0 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|452210976|ref|YP_007491090.1| - 0.00051 19.3 0.5 0.00051 19.3 0.4 3.6 3 1 1 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C FtsX PF02687.16 gi|452210976|ref|YP_007491090.1| - 0.056 13.2 19.4 0.4 10.4 1.2 3.3 3 0 0 3 3 3 0 FtsX-like permease family BPD_transp_1 PF00528.17 gi|452210977|ref|YP_007491091.1| - 2e-34 118.7 11.1 2e-34 118.7 7.7 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Claudin_2 PF13903.1 gi|452210977|ref|YP_007491091.1| - 3 7.5 9.2 0.31 10.7 0.1 2.9 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction Methyltransf_18 PF12847.2 gi|452210978|ref|YP_007491092.1| - 2.3e-12 47.4 0.0 9e-12 45.5 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452210978|ref|YP_007491092.1| - 3e-11 43.1 0.0 5.1e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|452210978|ref|YP_007491092.1| - 4.6e-10 39.8 0.0 8.6e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452210978|ref|YP_007491092.1| - 6.9e-09 35.6 0.0 1.1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|452210978|ref|YP_007491092.1| - 1.3e-08 35.0 0.0 3.5e-08 33.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|452210978|ref|YP_007491092.1| - 3.1e-08 33.0 0.0 4.9e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.7 gi|452210978|ref|YP_007491092.1| - 1.6e-07 31.6 0.0 3.9e-07 30.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|452210978|ref|YP_007491092.1| - 5.8e-07 28.8 0.0 7.6e-07 28.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.9 gi|452210978|ref|YP_007491092.1| - 7.3e-07 28.7 0.0 1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.6 gi|452210978|ref|YP_007491092.1| - 1.1e-05 24.8 0.0 1.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.8 gi|452210978|ref|YP_007491092.1| - 4.5e-05 22.7 0.0 6.9e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|452210978|ref|YP_007491092.1| - 5.2e-05 23.2 0.0 6.7e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|452210978|ref|YP_007491092.1| - 0.00012 22.0 0.0 0.00023 21.2 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase CMAS PF02353.15 gi|452210978|ref|YP_007491092.1| - 0.00032 19.8 0.0 0.0005 19.2 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|452210978|ref|YP_007491092.1| - 0.00033 19.8 0.0 0.00058 19.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DREV PF05219.7 gi|452210978|ref|YP_007491092.1| - 0.0023 16.8 0.0 0.0033 16.3 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.7 gi|452210978|ref|YP_007491092.1| - 0.0082 15.5 0.1 0.019 14.3 0.0 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW FmrO PF07091.6 gi|452210978|ref|YP_007491092.1| - 0.017 14.1 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Ribosomal_S6e PF01092.14 gi|452210980|ref|YP_007491094.1| - 9.6e-35 119.0 0.4 1.1e-34 118.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|452210981|ref|YP_007491095.1| - 9.2e-33 113.2 0.3 2.2e-31 108.7 0.2 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|452210981|ref|YP_007491095.1| - 5.6e-24 84.1 0.7 5.6e-24 84.1 0.5 2.8 3 0 0 3 3 3 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 gi|452210981|ref|YP_007491095.1| - 2.6e-14 52.6 5.3 5.6e-14 51.5 2.4 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.20 gi|452210981|ref|YP_007491095.1| - 9e-14 51.3 6.1 1.8e-10 40.7 0.1 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|452210981|ref|YP_007491095.1| - 1.5e-07 31.3 0.0 3.4e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.12 gi|452210981|ref|YP_007491095.1| - 0.0011 18.5 0.0 0.0037 16.8 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Miro PF08477.8 gi|452210981|ref|YP_007491095.1| - 0.0037 17.7 0.0 0.012 16.0 0.0 1.9 1 0 0 1 1 1 1 Miro-like protein PduV-EutP PF10662.4 gi|452210981|ref|YP_007491095.1| - 0.0083 15.6 0.0 0.21 11.0 0.0 2.7 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.18 gi|452210981|ref|YP_007491095.1| - 0.032 14.0 0.1 0.97 9.2 0.0 2.6 2 0 0 2 2 2 0 Dynamin family MobB PF03205.9 gi|452210981|ref|YP_007491095.1| - 0.035 13.8 0.3 0.17 11.6 0.1 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NDK PF00334.14 gi|452210983|ref|YP_007491097.1| - 8.3e-56 187.5 0.0 9.5e-56 187.3 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.15 gi|452210984|ref|YP_007491098.1| - 1.1e-19 70.0 0.6 1.1e-19 70.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.8 gi|452210984|ref|YP_007491098.1| - 0.0019 18.0 1.5 0.0025 17.6 1.0 1.2 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.9 gi|452210984|ref|YP_007491098.1| - 0.0036 16.9 4.3 0.0051 16.4 3.0 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Ribosomal_S28e PF01200.13 gi|452210985|ref|YP_007491099.1| - 7.9e-29 99.2 0.5 8.4e-29 99.1 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.21 gi|452210986|ref|YP_007491100.1| - 4.6e-26 90.1 0.8 5.4e-26 89.9 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.1 gi|452210986|ref|YP_007491100.1| - 0.032 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 PELOTA RNA binding domain eRF1_3 PF03465.10 gi|452210986|ref|YP_007491100.1| - 0.11 12.7 0.1 0.13 12.5 0.0 1.3 1 1 0 1 1 1 0 eRF1 domain 3 Radical_SAM PF04055.16 gi|452210987|ref|YP_007491101.1| - 3.3e-20 72.9 0.1 3.7e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|452210987|ref|YP_007491101.1| - 5e-08 32.9 0.0 9.7e-08 32.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452210987|ref|YP_007491101.1| - 3.5e-05 23.9 0.0 0.00017 21.7 0.0 1.8 1 1 1 2 2 2 1 4Fe-4S single cluster domain WD40 PF00400.27 gi|452210989|ref|YP_007491103.1| - 1e-32 110.7 12.1 0.00074 19.3 0.0 8.3 8 0 0 8 8 8 8 WD domain, G-beta repeat PQQ_3 PF13570.1 gi|452210989|ref|YP_007491103.1| - 4.2e-23 80.8 25.9 1.5e-06 28.2 0.1 8.5 8 1 1 9 9 9 4 PQQ-like domain PQQ_2 PF13360.1 gi|452210989|ref|YP_007491103.1| - 7.3e-22 77.9 11.1 9.3e-11 41.6 0.8 3.1 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.16 gi|452210989|ref|YP_007491103.1| - 1.3e-18 65.5 17.5 0.00029 20.2 0.1 7.2 7 0 0 7 7 7 5 PQQ enzyme repeat eIF2A PF08662.6 gi|452210989|ref|YP_007491103.1| - 0.00038 20.2 0.3 0.028 14.1 0.0 3.0 1 1 2 3 3 3 1 Eukaryotic translation initiation factor eIF2A HPS3_N PF14761.1 gi|452210989|ref|YP_007491103.1| - 0.0082 15.5 0.0 0.063 12.6 0.0 2.3 2 0 0 2 2 2 1 Hermansky-Pudlak syndrome 3 Cytochrom_D1 PF02239.11 gi|452210989|ref|YP_007491103.1| - 0.069 11.4 3.7 0.073 11.3 0.1 2.5 2 1 1 3 3 3 0 Cytochrome D1 heme domain VCBS PF13517.1 gi|452210989|ref|YP_007491103.1| - 4 7.8 10.9 47 4.4 1.9 4.5 1 1 2 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella PKD PF00801.15 gi|452210990|ref|YP_007491104.1| - 5.5e-201 650.7 127.3 2.3e-20 72.0 2.9 12.9 13 0 0 13 13 13 12 PKD domain Lactonase PF10282.4 gi|452210990|ref|YP_007491104.1| - 9.5e-34 116.9 13.5 1.2e-08 34.4 0.2 7.9 4 2 5 9 9 9 7 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452210990|ref|YP_007491104.1| - 2.8e-22 78.5 12.5 2.1e-06 26.3 0.2 5.4 2 2 2 5 5 5 4 Cytochrome D1 heme domain SGL PF08450.7 gi|452210990|ref|YP_007491104.1| - 1.3e-16 60.7 18.7 6.4e-08 32.2 1.4 8.3 3 2 3 6 6 6 5 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|452210990|ref|YP_007491104.1| - 1.7e-14 52.9 22.4 0.57 10.2 0.0 11.4 11 0 0 11 11 11 4 NHL repeat Arylesterase PF01731.15 gi|452210990|ref|YP_007491104.1| - 9.7e-14 51.1 21.0 0.18 11.8 0.0 12.1 5 2 8 13 13 13 3 Arylesterase PD40 PF07676.7 gi|452210990|ref|YP_007491104.1| - 1.6e-09 37.1 2.3 5.9 6.6 0.0 9.9 10 0 0 10 10 10 1 WD40-like Beta Propeller Repeat SBP56 PF05694.6 gi|452210990|ref|YP_007491104.1| - 3.4e-07 29.1 0.1 1.4 7.2 0.0 6.2 4 2 3 7 7 7 2 56kDa selenium binding protein (SBP56) Str_synth PF03088.11 gi|452210990|ref|YP_007491104.1| - 1.3e-05 25.0 1.0 33 4.5 0.0 7.8 7 2 2 9 9 9 0 Strictosidine synthase P_proprotein PF01483.15 gi|452210990|ref|YP_007491104.1| - 0.0062 16.2 0.4 61 3.4 0.0 6.2 5 0 0 5 5 5 0 Proprotein convertase P-domain DUF1513 PF07433.6 gi|452210990|ref|YP_007491104.1| - 0.04 12.7 5.0 7.5 5.3 0.0 5.0 3 2 3 7 7 7 0 Protein of unknown function (DUF1513) CPSase_L_chain PF00289.17 gi|452210990|ref|YP_007491104.1| - 9.8 6.3 11.3 5.4 7.1 0.2 5.2 5 2 1 6 6 6 0 Carbamoyl-phosphate synthase L chain, N-terminal domain NosD PF05048.8 gi|452210991|ref|YP_007491105.1| - 6e-66 221.9 46.2 1.2e-56 191.4 19.2 3.0 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452210991|ref|YP_007491105.1| - 2e-25 89.4 52.4 2.8e-15 56.4 21.2 3.1 1 1 1 2 2 2 2 Right handed beta helix region DUF86 PF01934.12 gi|452210992|ref|YP_007491106.1| - 2.1e-25 88.6 0.0 2.8e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Nse4-Nse3_bdg PF15412.1 gi|452210992|ref|YP_007491106.1| - 0.15 11.9 0.1 12 5.8 0.0 3.0 3 0 0 3 3 3 0 Binding domain of Nse4/EID3 to Nse3-MAGE Acetyltransf_3 PF13302.1 gi|452210993|ref|YP_007491107.1| - 5.5e-25 88.1 0.0 6.2e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452210993|ref|YP_007491107.1| - 8e-18 64.8 0.1 9e-18 64.6 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452210993|ref|YP_007491107.1| - 3.2e-06 27.0 0.1 4.7e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 gi|452210993|ref|YP_007491107.1| - 6.8e-06 26.0 0.0 1e-05 25.4 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF217 PF02697.9 gi|452210994|ref|YP_007491108.1| - 1.8e-19 69.7 2.2 2e-19 69.6 1.5 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 PA28_beta PF02252.13 gi|452210994|ref|YP_007491108.1| - 0.041 13.3 0.1 0.047 13.1 0.1 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit ATP-gua_PtransN PF02807.10 gi|452210994|ref|YP_007491108.1| - 0.14 12.3 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain FpoO PF10621.4 gi|452210995|ref|YP_007491109.1| - 5.4e-61 203.9 1.2 6.4e-61 203.6 0.8 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO FYVE PF01363.16 gi|452210995|ref|YP_007491109.1| - 0.016 15.0 2.3 0.34 10.8 1.6 2.3 1 1 0 1 1 1 0 FYVE zinc finger DUF2527 PF10736.4 gi|452210995|ref|YP_007491109.1| - 0.054 13.1 0.1 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF4428 PF14471.1 gi|452210995|ref|YP_007491109.1| - 0.091 12.5 10.3 0.24 11.1 0.9 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) zf-AD PF07776.10 gi|452210995|ref|YP_007491109.1| - 0.67 9.9 5.3 20 5.3 4.5 2.4 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) C1_2 PF03107.11 gi|452210995|ref|YP_007491109.1| - 5.4 7.2 9.4 9.5 6.4 0.1 4.0 4 0 0 4 4 4 0 C1 domain DUF2039 PF10217.4 gi|452210995|ref|YP_007491109.1| - 9.7 6.2 7.5 77 3.4 4.6 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) Oxidored_q1 PF00361.15 gi|452210996|ref|YP_007491110.1| - 9.2e-64 215.3 19.6 9.2e-64 215.3 13.6 2.5 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|452210996|ref|YP_007491110.1| - 0.29 10.7 7.8 0.033 13.7 1.7 2.3 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1 PF00361.15 gi|452210997|ref|YP_007491111.1| - 8.8e-64 215.3 26.5 8.8e-64 215.3 18.3 2.1 2 0 0 2 2 2 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q5_N PF01059.12 gi|452210997|ref|YP_007491111.1| - 0.013 15.3 5.2 0.013 15.3 3.6 4.6 4 1 0 5 5 5 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus 4HB_MCP_1 PF12729.2 gi|452210997|ref|YP_007491111.1| - 2.9 7.2 4.8 0.58 9.4 0.2 2.3 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction Oxidored_q1 PF00361.15 gi|452210998|ref|YP_007491112.1| - 3.7e-73 246.1 17.1 3.7e-73 246.1 11.8 3.5 4 1 0 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|452210998|ref|YP_007491112.1| - 6.6e-13 48.0 1.8 6.6e-13 48.0 1.3 2.7 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1_C PF01010.14 gi|452210998|ref|YP_007491112.1| - 0.017 14.6 6.3 0.25 10.8 4.3 2.5 1 1 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q2 PF00420.19 gi|452210999|ref|YP_007491113.1| - 1e-25 89.1 6.3 1.2e-25 88.9 4.4 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q1_C PF01010.14 gi|452210999|ref|YP_007491113.1| - 0.17 11.3 1.5 0.2 11.1 1.0 1.0 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q3 PF00499.15 gi|452211000|ref|YP_007491114.1| - 0.00052 19.8 1.5 0.00063 19.5 1.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PepSY_TM PF03929.11 gi|452211000|ref|YP_007491114.1| - 0.16 12.4 4.4 0.18 12.2 0.2 2.3 2 0 0 2 2 2 0 PepSY-associated TM helix Oxidored_q3 PF00499.15 gi|452211001|ref|YP_007491115.1| - 2e-15 56.8 11.1 2.5e-15 56.5 7.7 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.1 gi|452211001|ref|YP_007491115.1| - 0.018 15.0 12.7 0.018 15.0 8.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4040) Claudin_2 PF13903.1 gi|452211001|ref|YP_007491115.1| - 0.65 9.6 14.1 0.84 9.3 9.8 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF2109 PF09882.4 gi|452211001|ref|YP_007491115.1| - 0.78 9.7 11.3 0.23 11.4 5.3 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) GPI2 PF06432.6 gi|452211001|ref|YP_007491115.1| - 3 7.1 5.2 4.1 6.6 3.6 1.2 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase HlyIII PF03006.15 gi|452211001|ref|YP_007491115.1| - 3.4 7.0 9.5 4 6.7 6.6 1.1 1 0 0 1 1 1 0 Haemolysin-III related DUF4239 PF14023.1 gi|452211001|ref|YP_007491115.1| - 4.3 6.6 6.1 5.3 6.3 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) V_ATPase_I PF01496.14 gi|452211001|ref|YP_007491115.1| - 6.7 4.4 6.0 8.3 4.1 4.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fer4 PF00037.22 gi|452211002|ref|YP_007491116.1| - 3.5e-15 54.8 10.7 1.9e-08 33.5 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211002|ref|YP_007491116.1| - 6.2e-12 45.7 7.4 1.1e-11 44.8 5.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211002|ref|YP_007491116.1| - 6.3e-10 38.7 19.3 4.6e-08 32.7 7.5 2.3 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211002|ref|YP_007491116.1| - 9.1e-10 38.6 5.8 1.9e-09 37.6 4.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211002|ref|YP_007491116.1| - 3.8e-09 37.1 7.9 0.00052 20.6 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|452211002|ref|YP_007491116.1| - 5.1e-09 36.0 4.9 1.1e-08 34.9 3.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211002|ref|YP_007491116.1| - 2.1e-08 33.5 11.7 9.3e-05 22.1 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452211002|ref|YP_007491116.1| - 2.3e-08 33.7 6.6 4.3e-08 32.9 4.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211002|ref|YP_007491116.1| - 1.5e-07 30.9 14.3 1.3e-05 24.8 1.6 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452211002|ref|YP_007491116.1| - 1.3e-06 28.6 5.7 0.00076 19.8 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211002|ref|YP_007491116.1| - 2.7e-05 24.1 11.9 0.0033 17.6 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211002|ref|YP_007491116.1| - 3.2e-05 24.3 6.4 0.00082 19.8 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452211002|ref|YP_007491116.1| - 7.6e-05 22.9 10.4 0.0021 18.3 6.2 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452211002|ref|YP_007491116.1| - 0.00035 20.9 19.7 0.006 17.0 2.1 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452211002|ref|YP_007491116.1| - 0.0017 18.6 10.5 0.0027 18.0 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Oxidored_q4 PF00507.14 gi|452211003|ref|YP_007491117.1| - 5.1e-29 100.1 6.1 6.2e-29 99.8 4.2 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Amino_oxidase PF01593.19 gi|452211004|ref|YP_007491118.1| - 0.0005 19.2 0.0 0.00071 18.7 0.0 1.3 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.19 gi|452211004|ref|YP_007491118.1| - 0.0012 17.8 0.0 0.0012 17.8 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452211004|ref|YP_007491118.1| - 0.057 11.8 0.0 0.069 11.6 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein GMC_oxred_N PF00732.14 gi|452211004|ref|YP_007491118.1| - 0.12 11.5 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase Radical_SAM PF04055.16 gi|452211006|ref|YP_007491120.1| - 7.2e-21 75.0 0.1 1.1e-20 74.5 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF849 PF05853.7 gi|452211006|ref|YP_007491120.1| - 0.091 11.6 0.0 0.36 9.6 0.0 1.9 1 1 1 2 2 2 0 Prokaryotic protein of unknown function (DUF849) DUF3791 PF12668.2 gi|452211006|ref|YP_007491120.1| - 0.15 11.6 0.2 0.75 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) CofC PF01983.11 gi|452211007|ref|YP_007491121.1| - 8.7e-49 165.4 0.1 1.1e-48 165.1 0.1 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|452211007|ref|YP_007491121.1| - 0.00031 20.8 0.0 0.00041 20.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.4 gi|452211007|ref|YP_007491121.1| - 0.0033 17.0 0.0 0.0054 16.3 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) Lzipper-MIP1 PF14389.1 gi|452211007|ref|YP_007491121.1| - 0.021 14.8 0.6 0.046 13.8 0.4 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 CTP_transf_3 PF02348.14 gi|452211007|ref|YP_007491121.1| - 0.054 13.1 0.2 0.37 10.3 0.0 2.0 2 0 0 2 2 2 0 Cytidylyltransferase TetR_C_3 PF08362.6 gi|452211008|ref|YP_007491122.1| - 0.0011 18.6 0.1 0.0016 18.1 0.1 1.2 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region Fer4 PF00037.22 gi|452211009|ref|YP_007491123.1| - 4.1e-09 35.6 9.3 5.7e-07 28.8 5.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211009|ref|YP_007491123.1| - 8e-07 29.3 14.0 0.00018 21.8 2.6 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211009|ref|YP_007491123.1| - 4.7e-06 26.2 7.9 8.9e-05 22.1 4.0 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211009|ref|YP_007491123.1| - 6.1e-05 22.7 16.2 0.0011 18.7 1.8 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211009|ref|YP_007491123.1| - 9.7e-05 23.0 3.0 0.0049 17.5 1.3 2.0 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452211009|ref|YP_007491123.1| - 0.0013 18.5 5.7 0.0023 17.7 4.0 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211009|ref|YP_007491123.1| - 0.0017 18.5 5.8 0.0062 16.7 4.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211009|ref|YP_007491123.1| - 0.0093 15.8 5.5 0.0093 15.8 3.8 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211009|ref|YP_007491123.1| - 0.027 15.0 7.6 0.38 11.3 5.1 2.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452211009|ref|YP_007491123.1| - 0.03 14.8 10.1 0.38 11.4 4.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211009|ref|YP_007491123.1| - 0.034 14.1 4.3 0.072 13.1 3.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211009|ref|YP_007491123.1| - 0.035 14.5 6.0 0.048 14.0 4.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452211009|ref|YP_007491123.1| - 0.045 14.0 2.6 0.069 13.5 1.8 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452211009|ref|YP_007491123.1| - 0.078 12.8 2.8 10 6.0 0.0 2.9 1 1 0 2 2 2 0 Divergent 4Fe-4S mono-cluster Fer4_13 PF13370.1 gi|452211009|ref|YP_007491123.1| - 1.3 9.4 7.9 0.89 9.9 4.0 1.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain FAD_binding_3 PF01494.14 gi|452211010|ref|YP_007491124.1| - 2.5e-19 69.5 3.6 6.9e-17 61.5 2.5 3.0 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|452211010|ref|YP_007491124.1| - 3.9e-12 45.7 1.2 1.3e-05 24.2 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|452211010|ref|YP_007491124.1| - 9.5e-12 44.4 0.7 8.5e-08 31.4 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|452211010|ref|YP_007491124.1| - 1.2e-10 41.0 3.8 3.8e-10 39.4 2.6 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452211010|ref|YP_007491124.1| - 3.1e-08 32.5 0.3 6.8e-08 31.3 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|452211010|ref|YP_007491124.1| - 3e-07 29.7 0.1 8.2e-06 24.9 0.2 2.3 2 1 0 2 2 2 1 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|452211010|ref|YP_007491124.1| - 4.1e-07 29.9 0.0 1.3e-06 28.3 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|452211010|ref|YP_007491124.1| - 4.2e-06 26.7 8.3 1.6e-05 24.9 5.8 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|452211010|ref|YP_007491124.1| - 1.5e-05 24.0 0.9 2.2e-05 23.4 0.7 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|452211010|ref|YP_007491124.1| - 6.3e-05 22.1 0.2 0.00031 19.9 0.0 2.1 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.9 gi|452211010|ref|YP_007491124.1| - 7.1e-05 21.6 4.2 0.046 12.3 0.2 2.5 2 1 0 3 3 3 2 Tryptophan halogenase Pyr_redox_3 PF13738.1 gi|452211010|ref|YP_007491124.1| - 0.0042 17.1 0.1 0.0057 16.7 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|452211010|ref|YP_007491124.1| - 0.0044 16.6 0.1 0.021 14.4 0.0 2.2 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|452211010|ref|YP_007491124.1| - 0.0083 16.5 0.1 0.0083 16.5 0.0 2.4 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.16 gi|452211010|ref|YP_007491124.1| - 0.032 13.7 0.0 0.06 12.9 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GDI PF00996.13 gi|452211010|ref|YP_007491124.1| - 0.066 11.5 0.0 0.098 10.9 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor Shikimate_DH PF01488.15 gi|452211010|ref|YP_007491124.1| - 0.07 13.2 0.1 0.4 10.7 0.0 2.2 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase SE PF08491.5 gi|452211010|ref|YP_007491124.1| - 0.11 11.2 0.1 0.23 10.2 0.1 1.4 1 0 0 1 1 1 0 Squalene epoxidase XdhC_C PF13478.1 gi|452211010|ref|YP_007491124.1| - 0.12 12.7 0.0 0.37 11.0 0.0 1.8 2 0 0 2 2 2 0 XdhC Rossmann domain NAD_binding_7 PF13241.1 gi|452211010|ref|YP_007491124.1| - 0.13 12.4 0.5 0.39 10.9 0.1 2.0 2 1 0 2 2 2 0 Putative NAD(P)-binding NAD_binding_10 PF13460.1 gi|452211010|ref|YP_007491124.1| - 0.2 11.6 1.6 0.32 10.9 0.1 2.0 2 0 0 2 2 2 0 NADH(P)-binding TrkH PF02386.11 gi|452211011|ref|YP_007491125.1| - 1.1e-61 208.4 30.7 1.1e-60 205.1 14.5 2.2 1 1 1 2 2 2 2 Cation transport protein YniB PF14002.1 gi|452211011|ref|YP_007491125.1| - 0.054 12.9 0.5 0.054 12.9 0.4 2.6 3 1 0 3 3 3 0 YniB-like protein Peptidase_M50 PF02163.17 gi|452211011|ref|YP_007491125.1| - 5.3 5.9 8.6 3.7 6.4 2.0 3.0 2 2 0 2 2 2 0 Peptidase family M50 TrkA_N PF02254.13 gi|452211012|ref|YP_007491126.1| - 8.7e-48 161.1 8.1 8.1e-26 90.3 0.6 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.16 gi|452211012|ref|YP_007491126.1| - 4.8e-32 109.3 2.9 1.6e-15 56.4 0.0 3.1 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|452211012|ref|YP_007491126.1| - 2e-08 34.4 2.8 0.002 18.3 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|452211012|ref|YP_007491126.1| - 8.4e-06 25.9 2.5 0.061 13.4 0.2 2.4 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|452211012|ref|YP_007491126.1| - 0.00011 21.9 0.3 0.45 10.2 0.1 2.6 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|452211012|ref|YP_007491126.1| - 0.001 19.1 1.5 0.0087 16.0 0.3 2.2 2 0 0 2 2 2 1 NADH(P)-binding Pyr_redox PF00070.22 gi|452211012|ref|YP_007491126.1| - 0.0026 18.1 1.6 0.42 11.0 0.1 3.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.16 gi|452211012|ref|YP_007491126.1| - 0.003 17.3 0.3 20 5.0 0.0 3.6 3 0 0 3 3 3 0 ThiF family Pyr_redox_2 PF07992.9 gi|452211012|ref|YP_007491126.1| - 0.0032 17.3 1.1 1.4 8.7 0.1 2.8 2 2 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|452211012|ref|YP_007491126.1| - 0.007 15.8 0.1 2.4 7.5 0.0 2.4 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA Saccharop_dh PF03435.13 gi|452211012|ref|YP_007491126.1| - 0.0072 15.3 3.8 0.78 8.6 0.8 2.2 2 0 0 2 2 2 2 Saccharopine dehydrogenase OCD_Mu_crystall PF02423.10 gi|452211012|ref|YP_007491126.1| - 0.0081 14.9 0.5 0.35 9.5 0.0 2.2 2 0 0 2 2 2 1 Ornithine cyclodeaminase/mu-crystallin family UDPG_MGDP_dh_N PF03721.9 gi|452211012|ref|YP_007491126.1| - 0.0081 15.5 0.8 0.068 12.5 0.1 2.7 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|452211012|ref|YP_007491126.1| - 0.015 14.9 0.3 0.074 12.7 0.1 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.14 gi|452211012|ref|YP_007491126.1| - 0.048 12.7 3.0 1 8.4 0.0 3.0 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Iron_permease PF04120.7 gi|452211012|ref|YP_007491126.1| - 0.065 12.8 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Low affinity iron permease ADH_zinc_N PF00107.21 gi|452211012|ref|YP_007491126.1| - 0.091 12.3 0.2 0.41 10.2 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase TrkH PF02386.11 gi|452211013|ref|YP_007491127.1| - 7.9e-53 179.2 20.5 7.9e-53 179.2 14.2 2.2 1 1 1 2 2 2 2 Cation transport protein TrkA_N PF02254.13 gi|452211014|ref|YP_007491128.1| - 2.5e-51 172.5 7.5 4e-27 94.5 0.3 2.4 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.16 gi|452211014|ref|YP_007491128.1| - 1.4e-32 111.0 0.5 5.2e-16 58.0 0.0 3.4 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|452211014|ref|YP_007491128.1| - 4.1e-09 36.6 4.5 0.00063 19.9 0.6 2.6 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|452211014|ref|YP_007491128.1| - 4.5e-09 36.5 3.2 0.0021 18.1 0.4 2.6 2 1 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 gi|452211014|ref|YP_007491128.1| - 5.4e-06 25.6 3.0 0.0079 15.2 0.3 2.3 2 0 0 2 2 2 2 Saccharopine dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|452211014|ref|YP_007491128.1| - 2.5e-05 24.0 0.6 0.14 11.8 0.1 2.8 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.9 gi|452211014|ref|YP_007491128.1| - 8.4e-05 22.5 0.2 0.44 10.3 0.0 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|452211014|ref|YP_007491128.1| - 9.2e-05 21.9 0.3 0.12 11.7 0.0 2.5 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|452211014|ref|YP_007491128.1| - 9.4e-05 22.7 2.4 0.068 13.6 0.2 3.4 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent OCD_Mu_crystall PF02423.10 gi|452211014|ref|YP_007491128.1| - 0.0002 20.2 1.8 0.033 12.9 0.0 2.2 2 0 0 2 2 2 2 Ornithine cyclodeaminase/mu-crystallin family ThiF PF00899.16 gi|452211014|ref|YP_007491128.1| - 0.0003 20.6 0.1 4.7 7.0 0.0 3.6 3 0 0 3 3 3 1 ThiF family ADH_zinc_N PF00107.21 gi|452211014|ref|YP_007491128.1| - 0.0006 19.3 0.2 0.21 11.1 0.0 3.6 4 0 0 4 4 4 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|452211014|ref|YP_007491128.1| - 0.0012 18.2 0.7 0.029 13.7 0.1 3.0 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF1188 PF06690.6 gi|452211014|ref|YP_007491128.1| - 0.0013 17.9 1.3 0.031 13.4 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1188) NAD_binding_8 PF13450.1 gi|452211014|ref|YP_007491128.1| - 0.0053 16.7 0.1 3.2 7.8 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain CbiA PF01656.18 gi|452211014|ref|YP_007491128.1| - 0.0066 15.8 4.9 0.01 15.2 0.4 2.9 2 2 1 3 3 3 1 CobQ/CobB/MinD/ParA nucleotide binding domain 3HCDH_N PF02737.13 gi|452211014|ref|YP_007491128.1| - 0.0071 16.0 0.4 0.05 13.2 0.1 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|452211014|ref|YP_007491128.1| - 0.0073 16.6 0.8 3.8 7.9 0.0 2.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|452211014|ref|YP_007491128.1| - 0.014 14.3 0.3 2.2 7.1 0.1 2.5 3 0 0 3 3 3 0 Lycopene cyclase protein FAD_binding_3 PF01494.14 gi|452211014|ref|YP_007491128.1| - 0.036 13.1 0.0 0.56 9.1 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain NmrA PF05368.8 gi|452211014|ref|YP_007491128.1| - 0.04 13.1 1.8 0.052 12.7 0.4 1.7 2 0 0 2 2 2 0 NmrA-like family GFO_IDH_MocA PF01408.17 gi|452211014|ref|YP_007491128.1| - 0.044 14.2 0.2 3.4 8.1 0.1 2.6 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Methyltransf_18 PF12847.2 gi|452211014|ref|YP_007491128.1| - 0.055 14.0 0.4 3 8.4 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain 2-Hacid_dh_C PF02826.14 gi|452211014|ref|YP_007491128.1| - 0.064 12.3 0.2 0.93 8.6 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_C PF03720.10 gi|452211014|ref|YP_007491128.1| - 0.084 13.0 0.8 7.3 6.7 0.1 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AdoHcyase_NAD PF00670.16 gi|452211014|ref|YP_007491128.1| - 0.1 12.4 2.9 0.3 10.9 0.7 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CPSase_L_chain PF00289.17 gi|452211014|ref|YP_007491128.1| - 0.32 11.1 2.5 0.24 11.4 0.2 1.9 2 1 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain T4_baseplate PF12322.3 gi|452211015|ref|YP_007491129.1| - 0.016 14.4 0.5 0.016 14.4 0.3 1.0 1 0 0 1 1 1 0 T4 bacteriophage base plate protein CTDII PF01556.13 gi|452211016|ref|YP_007491130.1| - 1.7e-28 98.3 0.2 2.4e-20 72.2 0.2 3.2 3 0 0 3 3 3 2 DnaJ C terminal domain DnaJ PF00226.26 gi|452211016|ref|YP_007491130.1| - 1.9e-28 97.9 2.8 1.9e-28 97.9 1.9 1.8 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|452211016|ref|YP_007491130.1| - 8.2e-16 57.8 16.2 1.4e-15 57.0 11.3 1.4 1 0 0 1 1 1 1 DnaJ central domain Ogr_Delta PF04606.7 gi|452211016|ref|YP_007491130.1| - 0.035 13.7 9.3 1.2 8.8 0.3 3.1 3 1 0 3 3 3 0 Ogr/Delta-like zinc finger Prim_Zn_Ribbon PF08273.7 gi|452211016|ref|YP_007491130.1| - 0.068 13.2 16.6 0.049 13.7 2.3 3.2 2 1 1 3 3 3 0 Zinc-binding domain of primase-helicase Lar_restr_allev PF14354.1 gi|452211016|ref|YP_007491130.1| - 0.18 12.1 7.1 1 9.6 0.6 2.8 1 1 1 2 2 2 0 Restriction alleviation protein Lar Cytochrom_C PF00034.16 gi|452211016|ref|YP_007491130.1| - 1.8 9.4 4.1 0.74 10.6 0.1 2.4 3 0 0 3 3 3 0 Cytochrome c zf-C3HC4_3 PF13920.1 gi|452211016|ref|YP_007491130.1| - 5.9 6.6 7.5 5 6.8 0.5 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) HSP70 PF00012.15 gi|452211017|ref|YP_007491131.1| - 2.1e-253 841.7 13.9 9.6e-223 740.4 5.7 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|452211017|ref|YP_007491131.1| - 2.3e-17 62.5 2.3 2.3e-17 62.5 1.6 2.5 2 1 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.1 gi|452211017|ref|YP_007491131.1| - 7.3e-06 25.8 3.3 0.00049 19.9 0.1 4.1 2 1 0 2 2 2 1 Cell division protein FtsA FGGY_C PF02782.11 gi|452211017|ref|YP_007491131.1| - 1.3e-05 24.9 0.0 2.9e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.15 gi|452211017|ref|YP_007491131.1| - 0.00078 18.8 1.6 0.64 9.2 0.0 2.9 2 1 1 3 3 3 2 BadF/BadG/BcrA/BcrD ATPase family StbA PF06406.6 gi|452211017|ref|YP_007491131.1| - 0.028 13.3 0.2 0.11 11.3 0.0 2.1 3 0 0 3 3 3 0 StbA protein DUF3347 PF11827.3 gi|452211017|ref|YP_007491131.1| - 4.5 7.2 10.8 13 5.7 5.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) DDE_Tnp_1 PF01609.16 gi|452211018|ref|YP_007491132.1| - 3e-10 40.0 1.6 4.1e-10 39.5 1.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain PAH PF02671.16 gi|452211018|ref|YP_007491132.1| - 0.034 13.7 0.1 0.22 11.1 0.0 2.2 2 0 0 2 2 2 0 Paired amphipathic helix repeat Tmpp129 PF10272.4 gi|452211018|ref|YP_007491132.1| - 0.038 12.7 2.7 0.048 12.3 1.8 1.3 1 1 0 1 1 1 0 Putative transmembrane protein precursor ATP-grasp_3 PF02655.9 gi|452211019|ref|YP_007491133.1| - 1.1e-47 161.8 0.0 1.5e-47 161.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|452211019|ref|YP_007491133.1| - 6.9e-08 32.4 0.0 1.1e-06 28.5 0.0 2.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452211019|ref|YP_007491133.1| - 8.5e-05 21.4 0.0 0.016 13.9 0.0 3.0 1 1 1 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|452211019|ref|YP_007491133.1| - 0.045 13.1 0.0 0.2 11.0 0.0 1.9 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus Hydantoinase_A PF01968.13 gi|452211020|ref|YP_007491134.1| - 3.1e-23 82.2 1.9 1.7e-22 79.8 0.1 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.1 gi|452211020|ref|YP_007491134.1| - 2.7e-05 22.6 0.0 0.0048 15.2 0.0 2.2 2 0 0 2 2 2 2 MutL protein Hydant_A_N PF05378.8 gi|452211020|ref|YP_007491134.1| - 1.4 8.4 9.3 7.4 6.0 0.3 3.4 2 2 1 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region Peptidase_C5 PF00770.13 gi|452211021|ref|YP_007491135.1| - 0.02 14.4 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 Adenovirus endoprotease DUF1610 PF07754.6 gi|452211022|ref|YP_007491136.1| - 3.9e-19 68.3 19.0 9.9e-11 41.5 2.9 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) DZR PF12773.2 gi|452211022|ref|YP_007491136.1| - 0.00012 21.8 11.8 0.027 14.2 8.2 2.4 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452211022|ref|YP_007491136.1| - 0.00015 21.1 19.3 0.00047 19.5 2.9 3.2 2 2 1 3 3 3 1 zinc-ribbon domain DUF2039 PF10217.4 gi|452211022|ref|YP_007491136.1| - 0.002 18.0 3.1 0.002 18.0 2.1 1.7 1 1 1 2 2 2 1 Uncharacterized conserved protein (DUF2039) OrfB_Zn_ribbon PF07282.6 gi|452211022|ref|YP_007491136.1| - 0.0027 17.3 9.6 0.0092 15.6 3.7 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.1 gi|452211022|ref|YP_007491136.1| - 0.0032 16.6 16.0 0.7 9.1 1.1 3.8 2 1 1 3 3 3 1 zinc-ribbon domain tRNA-synt_1g PF09334.6 gi|452211022|ref|YP_007491136.1| - 0.016 13.8 1.8 0.017 13.7 1.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-C4_Topoisom PF01396.14 gi|452211022|ref|YP_007491136.1| - 0.05 13.1 12.3 2.5 7.6 0.1 3.5 2 1 1 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|452211022|ref|YP_007491136.1| - 0.079 12.6 9.9 0.54 9.9 2.5 2.3 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS91 PF14319.1 gi|452211022|ref|YP_007491136.1| - 0.12 11.9 9.2 0.21 11.0 6.4 1.5 1 1 0 1 1 1 0 Transposase zinc-binding domain DNA_RNApol_7kD PF03604.8 gi|452211022|ref|YP_007491136.1| - 0.14 11.6 13.0 1.5 8.3 0.1 3.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-UBP PF02148.14 gi|452211022|ref|YP_007491136.1| - 0.15 12.1 1.5 0.15 12.1 1.0 2.2 2 1 1 3 3 3 0 Zn-finger in ubiquitin-hydrolases and other protein zf-HIT PF04438.11 gi|452211022|ref|YP_007491136.1| - 0.2 11.3 15.8 0.23 11.1 3.6 2.9 1 1 1 2 2 2 0 HIT zinc finger UPF0547 PF10571.4 gi|452211022|ref|YP_007491136.1| - 0.21 11.2 11.8 1.5 8.6 5.7 3.2 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.5 gi|452211022|ref|YP_007491136.1| - 0.25 11.3 14.3 19 5.2 0.0 3.3 2 1 0 2 2 2 0 Zinc ribbon domain Prok-RING_1 PF14446.1 gi|452211022|ref|YP_007491136.1| - 0.25 11.0 11.2 0.32 10.7 0.8 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-HYPF PF07503.7 gi|452211022|ref|YP_007491136.1| - 0.27 10.6 12.9 4.7 6.7 5.8 2.4 2 1 0 2 2 2 0 HypF finger PolC_DP2 PF03833.8 gi|452211022|ref|YP_007491136.1| - 0.28 8.7 6.5 0.32 8.6 4.5 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.1 gi|452211022|ref|YP_007491136.1| - 0.33 10.6 14.4 4.2 7.1 0.1 3.8 3 1 1 4 4 4 0 Nudix N-terminal zf-Mss51 PF13824.1 gi|452211022|ref|YP_007491136.1| - 0.37 10.6 12.9 6.6 6.6 1.9 2.7 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C3HC4_4 PF15227.1 gi|452211022|ref|YP_007491136.1| - 0.43 10.5 10.1 0.27 11.1 0.8 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING C1_3 PF07649.7 gi|452211022|ref|YP_007491136.1| - 0.49 10.4 11.1 0.23 11.5 0.9 2.3 2 0 0 2 2 2 0 C1-like domain NMD3 PF04981.8 gi|452211022|ref|YP_007491136.1| - 0.49 9.4 8.0 0.69 8.9 5.5 1.3 1 1 0 1 1 1 0 NMD3 family C1_1 PF00130.17 gi|452211022|ref|YP_007491136.1| - 0.62 9.8 10.5 0.18 11.5 0.5 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C3HC4 PF00097.20 gi|452211022|ref|YP_007491136.1| - 0.74 9.5 12.4 0.21 11.3 1.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DNA_ligase_ZBD PF03119.11 gi|452211022|ref|YP_007491136.1| - 1.1 9.0 9.2 2.6 7.8 0.2 3.3 3 2 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain IBR PF01485.16 gi|452211022|ref|YP_007491136.1| - 1.4 8.8 11.7 45 4.0 8.1 2.3 1 1 0 1 1 1 0 IBR domain DUF4428 PF14471.1 gi|452211022|ref|YP_007491136.1| - 1.6 8.5 6.8 0.93 9.2 2.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) Tnp_zf-ribbon_2 PF13842.1 gi|452211022|ref|YP_007491136.1| - 1.6 9.1 14.3 0.17 12.3 2.4 2.8 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-FCS PF06467.9 gi|452211022|ref|YP_007491136.1| - 1.7 8.3 0.0 1.7 8.3 0.0 2.9 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif zinc-ribbons_6 PF07191.7 gi|452211022|ref|YP_007491136.1| - 1.7 8.5 9.4 18 5.2 6.5 2.2 1 1 0 1 1 1 0 zinc-ribbons HypA PF01155.14 gi|452211022|ref|YP_007491136.1| - 2.4 7.9 11.0 0.58 9.8 0.5 2.1 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family zf-NADH-PPase PF09297.6 gi|452211022|ref|YP_007491136.1| - 2.4 7.7 14.9 2.6 7.6 0.1 4.0 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37ae PF01780.14 gi|452211022|ref|YP_007491136.1| - 2.8 7.8 5.8 1.2 9.0 1.7 2.0 1 1 1 2 2 2 0 Ribosomal L37ae protein family DUF1272 PF06906.6 gi|452211022|ref|YP_007491136.1| - 2.8 7.8 11.7 7.7 6.4 1.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) CpXC PF14353.1 gi|452211022|ref|YP_007491136.1| - 3 7.8 11.1 1.6 8.6 0.2 2.8 1 1 2 3 3 3 0 CpXC protein zf-tcix PF14952.1 gi|452211022|ref|YP_007491136.1| - 3.3 7.0 19.0 9.3 5.6 1.0 3.2 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-C2HC5 PF06221.8 gi|452211022|ref|YP_007491136.1| - 3.7 7.3 10.9 2.7 7.8 2.2 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-B_box PF00643.19 gi|452211022|ref|YP_007491136.1| - 4 7.4 9.9 46 4.0 4.4 2.8 2 1 0 2 2 2 0 B-box zinc finger RecR PF02132.10 gi|452211022|ref|YP_007491136.1| - 4.1 6.9 15.0 6.4 6.3 0.1 3.9 2 1 2 4 4 4 0 RecR protein DUF2296 PF10058.4 gi|452211022|ref|YP_007491136.1| - 4.2 7.1 14.3 4.7 7.0 1.6 3.4 2 2 1 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) zf-LITAF-like PF10601.4 gi|452211022|ref|YP_007491136.1| - 5.6 6.9 12.2 3.2 7.7 0.3 3.4 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|452211022|ref|YP_007491136.1| - 5.6 6.5 14.3 1.8 8.1 2.2 3.4 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-C3HC4_2 PF13923.1 gi|452211022|ref|YP_007491136.1| - 6.3 6.9 10.3 1.6 8.8 0.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-piccolo PF05715.8 gi|452211022|ref|YP_007491136.1| - 6.8 6.7 8.7 9.6 6.3 4.0 2.2 2 1 0 2 2 2 0 Piccolo Zn-finger zf-IS66 PF13005.2 gi|452211022|ref|YP_007491136.1| - 8.2 6.4 13.7 14 5.7 0.2 3.6 3 1 0 3 3 3 0 zinc-finger binding domain of transposase IS66 PhnA_Zn_Ribbon PF08274.7 gi|452211022|ref|YP_007491136.1| - 8.5 6.2 12.9 2.1 8.1 5.0 2.6 2 1 0 2 2 1 0 PhnA Zinc-Ribbon zf-C2H2_4 PF13894.1 gi|452211022|ref|YP_007491136.1| - 8.7 6.9 15.6 7.7 7.0 0.6 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger EF1_GNE PF00736.14 gi|452211023|ref|YP_007491137.1| - 8.9e-21 73.3 0.2 9.3e-21 73.3 0.2 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain PAS_3 PF08447.6 gi|452211024|ref|YP_007491138.1| - 2.9e-89 293.3 15.5 4e-23 81.3 0.4 5.6 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.1 gi|452211024|ref|YP_007491138.1| - 7.4e-49 164.4 1.4 5e-11 42.8 0.1 6.6 6 0 0 6 6 6 5 PAS domain HisKA_2 PF07568.7 gi|452211024|ref|YP_007491138.1| - 8.8e-33 112.0 4.3 8.8e-33 112.0 3.0 3.2 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.19 gi|452211024|ref|YP_007491138.1| - 1.2e-31 108.7 0.3 1.2e-07 31.4 0.0 6.8 6 0 0 6 6 6 5 PAS fold PAS_4 PF08448.5 gi|452211024|ref|YP_007491138.1| - 2.7e-22 78.8 0.0 5.4e-11 42.4 0.0 4.9 4 0 0 4 4 4 4 PAS fold PAS_11 PF14598.1 gi|452211024|ref|YP_007491138.1| - 1.5e-13 50.6 0.0 0.0019 18.1 0.0 5.3 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|452211024|ref|YP_007491138.1| - 4.5e-11 42.4 0.0 4.4e-10 39.2 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|452211024|ref|YP_007491138.1| - 5.7e-05 23.4 0.4 0.00015 22.1 0.3 1.7 1 0 0 1 1 1 1 HWE histidine kinase YcgL PF05166.8 gi|452211024|ref|YP_007491138.1| - 0.00013 22.0 3.1 4.9 7.3 0.0 3.9 3 0 0 3 3 3 2 YcgL domain PAS_8 PF13188.1 gi|452211024|ref|YP_007491138.1| - 0.00024 20.8 0.0 0.12 12.3 0.0 4.1 4 0 0 4 4 4 1 PAS domain PAS_10 PF13596.1 gi|452211024|ref|YP_007491138.1| - 0.0063 16.7 0.0 0.71 10.1 0.0 3.5 3 0 0 3 3 3 1 PAS domain Nit_Regul_Hom PF10126.4 gi|452211024|ref|YP_007491138.1| - 0.017 14.9 0.5 0.32 10.7 0.0 3.1 3 0 0 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII HATPase_c_2 PF13581.1 gi|452211024|ref|YP_007491138.1| - 0.055 13.2 0.0 0.17 11.6 0.0 1.9 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.19 gi|452211025|ref|YP_007491139.1| - 8.4e-22 77.2 0.1 9.8e-22 77.0 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain ThiI PF02568.9 gi|452211027|ref|YP_007491141.1| - 7.9e-53 178.8 0.0 1.1e-52 178.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|452211027|ref|YP_007491141.1| - 5.8e-16 58.6 0.0 2.1e-15 56.8 0.0 2.0 2 0 0 2 2 2 1 THUMP domain QueC PF06508.8 gi|452211027|ref|YP_007491141.1| - 1.8e-05 24.1 0.0 0.022 14.0 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|452211027|ref|YP_007491141.1| - 0.00018 20.1 0.0 0.00039 19.1 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase PAS_9 PF13426.1 gi|452211029|ref|YP_007491143.1| - 3.2e-31 107.7 1.0 3.3e-15 56.3 0.0 3.9 4 0 0 4 4 4 3 PAS domain HATPase_c PF02518.21 gi|452211029|ref|YP_007491143.1| - 2.3e-30 104.5 0.1 4.4e-30 103.6 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|452211029|ref|YP_007491143.1| - 8.3e-30 102.8 0.0 1.8e-11 43.8 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|452211029|ref|YP_007491143.1| - 1.1e-24 85.4 0.0 8.5e-09 34.9 0.0 3.7 3 0 0 3 3 3 3 PAS domain Response_reg PF00072.19 gi|452211029|ref|YP_007491143.1| - 2.8e-20 72.3 0.1 7e-19 67.8 0.0 2.9 3 0 0 3 3 3 1 Response regulator receiver domain HisKA PF00512.20 gi|452211029|ref|YP_007491143.1| - 3.2e-16 59.0 0.0 2.2e-15 56.3 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|452211029|ref|YP_007491143.1| - 2.2e-15 56.6 0.0 1.7e-05 24.7 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|452211029|ref|YP_007491143.1| - 2.8e-07 30.5 0.0 0.035 14.2 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_7 PF12860.2 gi|452211029|ref|YP_007491143.1| - 7e-05 22.8 0.3 0.7 9.9 0.0 4.5 4 1 0 4 4 4 2 PAS fold MMR_HSR1 PF01926.18 gi|452211031|ref|YP_007491145.1| - 9e-18 64.3 0.7 1.8e-13 50.4 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|452211031|ref|YP_007491145.1| - 1.2e-10 40.8 1.0 0.00021 20.6 0.1 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|452211031|ref|YP_007491145.1| - 1.4e-06 27.9 1.8 3.7e-05 23.2 0.1 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain DUF258 PF03193.11 gi|452211031|ref|YP_007491145.1| - 0.00019 20.6 0.1 0.00033 19.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 Miro PF08477.8 gi|452211031|ref|YP_007491145.1| - 0.00035 21.0 0.2 0.21 12.1 0.0 2.7 2 1 0 2 2 2 2 Miro-like protein AIG1 PF04548.11 gi|452211031|ref|YP_007491145.1| - 0.0008 18.5 0.0 0.0016 17.6 0.0 1.5 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.18 gi|452211031|ref|YP_007491145.1| - 0.0011 18.8 2.9 2 8.1 0.1 3.2 2 1 1 3 3 3 2 Dynamin family cobW PF02492.14 gi|452211031|ref|YP_007491145.1| - 0.002 17.5 0.3 0.002 17.5 0.2 1.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.12 gi|452211031|ref|YP_007491145.1| - 0.092 12.2 0.3 0.24 10.8 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ArgK PF03308.11 gi|452211031|ref|YP_007491145.1| - 0.096 11.4 4.7 0.16 10.7 0.2 2.4 2 1 1 3 3 3 0 ArgK protein Lip_prot_lig_C PF10437.4 gi|452211032|ref|YP_007491146.1| - 0.0034 17.0 0.2 0.0034 17.0 0.1 1.0 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus CR6_interact PF10147.4 gi|452211032|ref|YP_007491146.1| - 0.0081 15.5 0.8 0.0088 15.3 0.6 1.0 1 0 0 1 1 1 1 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Transposase_22 PF02994.9 gi|452211032|ref|YP_007491146.1| - 0.014 13.9 0.5 0.014 13.8 0.4 1.0 1 0 0 1 1 1 0 L1 transposable element BLOC1_2 PF10046.4 gi|452211032|ref|YP_007491146.1| - 0.02 15.0 1.1 0.025 14.6 0.7 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Prefoldin_2 PF01920.15 gi|452211032|ref|YP_007491146.1| - 0.024 14.3 1.5 0.027 14.2 1.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit TBPIP PF07106.8 gi|452211032|ref|YP_007491146.1| - 0.026 14.0 0.4 0.026 14.0 0.3 1.0 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) HSBP1 PF06825.7 gi|452211032|ref|YP_007491146.1| - 0.034 13.7 2.0 0.046 13.3 1.3 1.3 1 1 0 1 1 1 0 Heat shock factor binding protein 1 COG6 PF06419.6 gi|452211032|ref|YP_007491146.1| - 0.047 11.8 0.9 0.051 11.7 0.6 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 RmuC PF02646.11 gi|452211032|ref|YP_007491146.1| - 0.05 12.4 0.1 0.053 12.3 0.0 1.0 1 0 0 1 1 1 0 RmuC family GP41 PF00517.12 gi|452211032|ref|YP_007491146.1| - 0.053 13.0 0.1 0.055 13.0 0.1 1.0 1 0 0 1 1 1 0 Retroviral envelope protein Dynamitin PF04912.9 gi|452211032|ref|YP_007491146.1| - 0.057 12.2 0.1 0.057 12.2 0.1 1.0 1 0 0 1 1 1 0 Dynamitin THOC7 PF05615.8 gi|452211032|ref|YP_007491146.1| - 0.058 13.6 0.5 0.061 13.5 0.4 1.0 1 0 0 1 1 1 0 Tho complex subunit 7 DUF4391 PF14335.1 gi|452211032|ref|YP_007491146.1| - 0.062 12.6 1.9 0.067 12.5 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) NPV_P10 PF05531.7 gi|452211032|ref|YP_007491146.1| - 0.068 13.4 0.5 0.081 13.1 0.4 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.7 gi|452211032|ref|YP_007491146.1| - 0.085 12.6 0.2 0.092 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4298 PF14131.1 gi|452211032|ref|YP_007491146.1| - 0.087 12.7 0.6 0.11 12.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) DASH_Dad3 PF08656.5 gi|452211032|ref|YP_007491146.1| - 0.096 12.3 0.3 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 DASH complex subunit Dad3 FlaC_arch PF05377.6 gi|452211032|ref|YP_007491146.1| - 0.14 12.0 2.1 0.19 11.6 1.4 1.2 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) Fib_alpha PF08702.5 gi|452211032|ref|YP_007491146.1| - 0.15 12.2 0.6 0.16 12.0 0.4 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family SlyX PF04102.7 gi|452211032|ref|YP_007491146.1| - 0.15 12.4 1.5 0.18 12.1 1.0 1.1 1 0 0 1 1 1 0 SlyX MerR-DNA-bind PF09278.6 gi|452211032|ref|YP_007491146.1| - 0.15 12.4 0.7 0.19 12.1 0.5 1.2 1 0 0 1 1 1 0 MerR, DNA binding XhlA PF10779.4 gi|452211032|ref|YP_007491146.1| - 0.2 11.6 1.5 0.24 11.3 1.0 1.2 1 0 0 1 1 1 0 Haemolysin XhlA Pput2613-deam PF14427.1 gi|452211033|ref|YP_007491147.1| - 0.0094 15.6 0.4 0.016 14.8 0.2 1.4 1 1 0 1 1 1 1 Pput_2613-like deaminase Toxin_49 PF15529.1 gi|452211033|ref|YP_007491147.1| - 0.081 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Putative toxin 49 Usp PF00582.21 gi|452211035|ref|YP_007491149.1| - 2.6e-39 134.6 0.0 2.9e-39 134.4 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPD52 PF04201.10 gi|452211037|ref|YP_007491151.1| - 0.088 12.5 0.5 0.11 12.2 0.4 1.2 1 0 0 1 1 1 0 Tumour protein D52 family PspA_IM30 PF04012.7 gi|452211038|ref|YP_007491152.1| - 1.5e-24 86.6 32.2 1.7e-24 86.4 22.3 1.0 1 0 0 1 1 1 1 PspA/IM30 family Osmo_CC PF08946.5 gi|452211038|ref|YP_007491152.1| - 0.0089 16.0 2.5 0.0089 16.0 1.8 2.6 2 0 0 2 2 2 1 Osmosensory transporter coiled coil Flagellin_C PF00700.16 gi|452211038|ref|YP_007491152.1| - 0.01 15.9 10.5 0.36 11.0 0.1 3.5 1 1 2 3 3 3 0 Bacterial flagellin C-terminal helical region NOG1 PF06858.9 gi|452211038|ref|YP_007491152.1| - 0.03 14.1 0.2 0.15 11.9 0.0 2.3 2 1 1 3 3 3 0 Nucleolar GTP-binding protein 1 (NOG1) MutS_III PF05192.13 gi|452211038|ref|YP_007491152.1| - 0.063 13.0 0.1 0.063 13.0 0.1 2.3 1 1 0 2 2 2 0 MutS domain III DUF1664 PF07889.7 gi|452211038|ref|YP_007491152.1| - 0.065 13.0 14.9 0.26 11.0 1.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Scaffolding_pro PF11418.3 gi|452211038|ref|YP_007491152.1| - 0.68 10.2 17.5 2.1 8.7 2.8 3.7 1 1 2 3 3 3 0 Phi29 scaffolding protein NPV_P10 PF05531.7 gi|452211038|ref|YP_007491152.1| - 8.1 6.7 11.6 8.7 6.6 0.5 3.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein V4R PF02830.13 gi|452211039|ref|YP_007491153.1| - 5.5e-17 61.3 0.7 1.1e-16 60.3 0.5 1.6 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.15 gi|452211039|ref|YP_007491153.1| - 4.1e-13 48.7 0.0 7.4e-13 47.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|452211039|ref|YP_007491153.1| - 4.1e-06 26.3 0.0 6.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|452211039|ref|YP_007491153.1| - 4.4e-05 23.2 0.0 0.0001 22.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|452211039|ref|YP_007491153.1| - 0.00048 19.6 0.0 0.00087 18.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.1 gi|452211039|ref|YP_007491153.1| - 0.00078 19.7 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452211039|ref|YP_007491153.1| - 0.0075 15.9 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|452211039|ref|YP_007491153.1| - 0.066 12.6 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.6 gi|452211039|ref|YP_007491153.1| - 0.089 12.7 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HxlR PF01638.12 gi|452211039|ref|YP_007491153.1| - 0.13 11.9 0.0 0.26 10.9 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_38 PF13936.1 gi|452211039|ref|YP_007491153.1| - 0.15 11.6 0.0 0.37 10.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2110 PF09883.4 gi|452211040|ref|YP_007491154.1| - 4.3e-89 298.0 0.1 4.9e-89 297.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) MarR PF01047.17 gi|452211041|ref|YP_007491155.1| - 0.0046 16.6 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|452211041|ref|YP_007491155.1| - 0.012 15.2 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.1 gi|452211041|ref|YP_007491155.1| - 0.041 13.7 0.2 0.11 12.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_27 PF13463.1 gi|452211041|ref|YP_007491155.1| - 0.078 13.3 0.0 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF4407 PF14362.1 gi|452211041|ref|YP_007491155.1| - 0.65 8.8 4.2 0.81 8.5 1.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TRM PF02005.11 gi|452211042|ref|YP_007491156.1| - 1.5e-104 349.9 0.0 1.7e-104 349.7 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase DUF3195 PF11424.3 gi|452211042|ref|YP_007491156.1| - 0.0058 16.7 0.0 0.023 14.8 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3195) Cons_hypoth95 PF03602.10 gi|452211042|ref|YP_007491156.1| - 0.015 14.6 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 DZR PF12773.2 gi|452211042|ref|YP_007491156.1| - 0.12 12.2 0.3 0.41 10.4 0.1 2.0 2 0 0 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|452211042|ref|YP_007491156.1| - 0.76 9.0 6.6 0.43 9.8 2.4 2.3 2 1 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|452211042|ref|YP_007491156.1| - 3.8 7.2 7.5 7.6 6.3 0.6 2.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Cupredoxin_1 PF13473.1 gi|452211043|ref|YP_007491157.1| - 0.0021 17.8 0.0 0.004 17.0 0.0 1.5 1 0 0 1 1 1 1 Cupredoxin-like domain Mucin PF01456.12 gi|452211043|ref|YP_007491157.1| - 0.031 14.0 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Copper-bind PF00127.15 gi|452211043|ref|YP_007491157.1| - 0.068 13.4 0.1 0.33 11.2 0.0 2.2 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family TRAP_alpha PF03896.11 gi|452211044|ref|YP_007491158.1| - 0.00021 20.4 1.2 0.00026 20.1 0.8 1.2 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit SpoIIIAH PF12685.2 gi|452211044|ref|YP_007491158.1| - 0.018 14.5 1.5 0.023 14.1 1.1 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein MAGP PF05507.6 gi|452211044|ref|YP_007491158.1| - 0.079 12.7 2.1 0.12 12.1 1.5 1.3 1 0 0 1 1 1 0 Microfibril-associated glycoprotein (MAGP) Herpes_DNAp_acc PF04929.7 gi|452211044|ref|YP_007491158.1| - 0.62 8.9 2.9 0.82 8.5 2.0 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Mucin PF01456.12 gi|452211044|ref|YP_007491158.1| - 0.66 9.7 6.8 0.98 9.1 4.7 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein Trypan_PARP PF05887.6 gi|452211044|ref|YP_007491158.1| - 1.2 8.9 21.5 1.7 8.4 14.9 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Tim54 PF11711.3 gi|452211044|ref|YP_007491158.1| - 1.7 7.1 6.3 2 6.9 4.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 MCPVI PF02993.9 gi|452211044|ref|YP_007491158.1| - 2.5 8.2 5.9 3.1 7.8 4.1 1.1 1 0 0 1 1 1 0 Minor capsid protein VI DUF3332 PF11810.3 gi|452211044|ref|YP_007491158.1| - 2.8 7.5 4.6 3.6 7.2 0.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF3332) Merozoite_SPAM PF07133.6 gi|452211044|ref|YP_007491158.1| - 8.7 6.2 14.3 12 5.7 9.9 1.2 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DASH_Dad4 PF08650.5 gi|452211045|ref|YP_007491159.1| - 0.044 13.6 0.8 0.044 13.6 0.6 1.0 1 0 0 1 1 1 0 DASH complex subunit Dad4 DUF4010 PF13194.1 gi|452211046|ref|YP_007491160.1| - 1.5e-49 168.2 18.7 1.5e-49 168.2 13.0 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.11 gi|452211046|ref|YP_007491160.1| - 1.5e-07 31.3 7.3 1.5e-07 31.3 5.1 3.9 2 2 0 3 3 3 1 MgtC family Metallophos_2 PF12850.2 gi|452211047|ref|YP_007491161.1| - 1.2e-21 77.1 0.0 1.9e-21 76.4 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|452211047|ref|YP_007491161.1| - 7.4e-15 54.8 1.2 3.8e-14 52.5 0.8 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|452211047|ref|YP_007491161.1| - 1.8e-14 53.5 0.6 6.8e-10 38.5 0.1 2.6 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily MT0933_antitox PF14013.1 gi|452211047|ref|YP_007491161.1| - 0.83 9.8 2.8 7.2 6.8 0.0 3.0 3 1 0 3 3 3 0 MT0933-like antitoxin protein Methyltrn_RNA_2 PF04013.7 gi|452211048|ref|YP_007491162.1| - 2.5e-63 213.2 0.0 2.8e-63 213.0 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase THUMP PF02926.12 gi|452211049|ref|YP_007491163.1| - 2.6e-11 43.5 0.8 6.6e-11 42.2 0.0 2.0 2 1 1 3 3 3 1 THUMP domain DNA_pol3_a_NI PF14480.1 gi|452211049|ref|YP_007491163.1| - 0.0038 16.8 0.1 0.0082 15.7 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase III polC-type N-terminus I DrsE PF02635.10 gi|452211049|ref|YP_007491163.1| - 0.095 12.7 0.1 0.52 10.3 0.0 2.1 2 0 0 2 2 2 0 DsrE/DsrF-like family Ribosomal_L21e PF01157.13 gi|452211050|ref|YP_007491164.1| - 1.6e-27 95.1 0.4 1.8e-27 95.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.11 gi|452211051|ref|YP_007491165.1| - 1.7e-14 53.8 1.8 2e-14 53.5 1.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF655 PF04919.7 gi|452211053|ref|YP_007491167.1| - 2.4e-68 229.4 0.1 2.8e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_3 PF12836.2 gi|452211053|ref|YP_007491167.1| - 0.00052 19.8 0.0 0.012 15.5 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_6 PF14579.1 gi|452211053|ref|YP_007491167.1| - 0.00068 19.6 0.0 0.0027 17.7 0.0 1.8 1 1 1 2 2 2 1 Helix-hairpin-helix motif RrnaAD PF00398.15 gi|452211054|ref|YP_007491168.1| - 5.9e-40 136.9 0.0 6.6e-40 136.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|452211054|ref|YP_007491168.1| - 0.0011 18.9 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|452211054|ref|YP_007491168.1| - 0.1 13.2 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452211055|ref|YP_007491169.1| - 7.3e-16 58.2 0.0 1.1e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452211055|ref|YP_007491169.1| - 9.8e-12 44.5 0.0 1.4e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|452211055|ref|YP_007491169.1| - 5.5e-09 36.6 0.0 1.3e-08 35.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452211055|ref|YP_007491169.1| - 2.5e-07 30.3 0.0 3.5e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452211055|ref|YP_007491169.1| - 1.5e-06 27.9 0.0 0.00075 19.2 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452211055|ref|YP_007491169.1| - 9.1e-06 26.0 0.0 0.0078 16.6 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain PCMT PF01135.14 gi|452211055|ref|YP_007491169.1| - 4.5e-05 23.0 0.0 0.00025 20.6 0.0 2.0 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.7 gi|452211055|ref|YP_007491169.1| - 0.00014 22.2 0.0 0.47 10.9 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain MetW PF07021.7 gi|452211055|ref|YP_007491169.1| - 0.0031 16.9 0.0 0.0052 16.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.15 gi|452211055|ref|YP_007491169.1| - 0.009 15.1 0.0 1.2 8.1 0.0 2.1 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase DREV PF05219.7 gi|452211055|ref|YP_007491169.1| - 0.03 13.2 0.0 0.063 12.1 0.0 1.5 2 0 0 2 2 2 0 DREV methyltransferase Met_10 PF02475.11 gi|452211055|ref|YP_007491169.1| - 0.041 13.4 0.1 0.072 12.6 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein PrmA PF06325.8 gi|452211055|ref|YP_007491169.1| - 0.045 12.8 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|452211055|ref|YP_007491169.1| - 0.056 12.4 0.0 0.076 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.1 gi|452211055|ref|YP_007491169.1| - 0.076 13.3 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.4 gi|452211055|ref|YP_007491169.1| - 0.077 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_10 PF05971.7 gi|452211055|ref|YP_007491169.1| - 0.12 11.4 0.0 0.41 9.7 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF890) Cons_hypoth95 PF03602.10 gi|452211055|ref|YP_007491169.1| - 0.13 11.6 0.0 0.25 10.7 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 NUDIX PF00293.23 gi|452211057|ref|YP_007491171.1| - 1.1e-19 70.4 0.0 1.7e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain NUDIX-like PF09296.6 gi|452211057|ref|YP_007491171.1| - 7.1e-14 51.9 0.0 1.3e-13 51.1 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain zf-NADH-PPase PF09297.6 gi|452211057|ref|YP_007491171.1| - 3.5e-12 45.6 3.1 5.5e-12 44.9 2.1 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|452211057|ref|YP_007491171.1| - 7.6e-05 22.4 0.3 0.00052 19.7 0.1 2.1 2 0 0 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.2 gi|452211057|ref|YP_007491171.1| - 0.00099 18.8 0.7 0.0018 18.0 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|452211057|ref|YP_007491171.1| - 0.0011 18.6 0.6 0.0019 17.8 0.4 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|452211057|ref|YP_007491171.1| - 0.013 14.9 4.0 0.51 9.8 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.14 gi|452211057|ref|YP_007491171.1| - 0.016 14.9 0.3 0.025 14.2 0.2 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family UPF0547 PF10571.4 gi|452211057|ref|YP_007491171.1| - 0.041 13.5 1.8 2.1 8.0 0.3 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.1 gi|452211057|ref|YP_007491171.1| - 0.046 12.9 5.1 4.8 6.5 0.4 2.2 1 1 0 1 1 1 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|452211057|ref|YP_007491171.1| - 0.15 11.7 1.2 4 7.1 0.0 2.4 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit RRN7 PF11781.3 gi|452211057|ref|YP_007491171.1| - 0.18 11.3 2.6 1.4 8.4 0.2 2.5 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-C3HC4_2 PF13923.1 gi|452211057|ref|YP_007491171.1| - 0.29 11.2 1.5 0.51 10.4 1.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.20 gi|452211057|ref|YP_007491171.1| - 0.36 10.5 1.6 0.66 9.6 1.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF35_N PF12172.3 gi|452211057|ref|YP_007491171.1| - 0.48 10.4 3.3 1 9.3 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Nudix_N_2 PF14803.1 gi|452211057|ref|YP_007491171.1| - 0.61 9.8 3.2 8.6 6.1 2.2 2.3 1 1 0 1 1 1 0 Nudix N-terminal TetR_N PF00440.18 gi|452211058|ref|YP_007491172.1| - 2.8e-16 58.8 0.2 6e-16 57.8 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family WHG PF13305.1 gi|452211058|ref|YP_007491172.1| - 0.035 14.6 0.0 0.073 13.6 0.0 1.6 1 0 0 1 1 1 0 WHG domain HTH_23 PF13384.1 gi|452211058|ref|YP_007491172.1| - 0.12 12.0 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Fer4 PF00037.22 gi|452211059|ref|YP_007491173.1| - 2e-10 39.8 18.4 1.7e-05 24.2 3.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211059|ref|YP_007491173.1| - 1.1e-06 28.2 32.8 1.1e-05 25.1 12.6 2.0 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211059|ref|YP_007491173.1| - 5.5e-06 27.0 15.4 0.0016 19.1 3.0 2.6 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|452211059|ref|YP_007491173.1| - 5.9e-06 26.4 30.2 0.00016 21.8 12.7 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211059|ref|YP_007491173.1| - 6.7e-06 26.3 19.2 0.00027 21.2 13.7 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211059|ref|YP_007491173.1| - 7.8e-06 25.6 11.3 0.0081 16.0 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452211059|ref|YP_007491173.1| - 2.6e-05 24.1 16.1 0.0006 19.7 1.8 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain FMN_red PF03358.10 gi|452211059|ref|YP_007491173.1| - 0.00038 19.9 0.0 0.00059 19.3 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Fer4_6 PF12837.2 gi|452211059|ref|YP_007491173.1| - 0.00086 19.0 19.3 0.0092 15.8 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452211059|ref|YP_007491173.1| - 0.0037 17.7 24.3 0.1 13.1 5.1 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_2 PF02525.12 gi|452211059|ref|YP_007491173.1| - 0.0062 16.0 0.0 0.0099 15.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452211059|ref|YP_007491173.1| - 0.0076 16.2 0.0 0.013 15.5 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Fer4_2 PF12797.2 gi|452211059|ref|YP_007491173.1| - 0.0089 15.9 18.4 0.021 14.7 2.3 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452211059|ref|YP_007491173.1| - 0.015 15.6 13.4 0.038 14.3 1.9 2.7 2 1 2 4 4 3 0 4Fe-4S dicluster domain Flavodoxin_3 PF12641.2 gi|452211059|ref|YP_007491173.1| - 0.02 14.3 0.1 0.3 10.5 0.0 2.2 2 0 0 2 2 2 0 Flavodoxin domain Fer4_4 PF12800.2 gi|452211059|ref|YP_007491173.1| - 0.53 10.7 28.0 0.3 11.5 3.2 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452211059|ref|YP_007491173.1| - 0.53 10.7 20.7 0.32 11.4 3.1 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452211059|ref|YP_007491173.1| - 4.3 7.8 19.1 1.4 9.3 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Glyoxalase_2 PF12681.2 gi|452211060|ref|YP_007491174.1| - 5.2e-14 52.7 0.0 5.9e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|452211060|ref|YP_007491174.1| - 6.7e-13 48.7 0.0 2.3e-12 46.9 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.1 gi|452211060|ref|YP_007491174.1| - 4e-09 36.4 0.0 1e-08 35.1 0.0 1.6 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.1 gi|452211060|ref|YP_007491174.1| - 0.097 12.5 0.0 1.3 8.9 0.0 2.0 1 1 0 1 1 1 0 Glyoxalase-like domain DUF1102 PF06510.6 gi|452211061|ref|YP_007491175.1| - 0.027 14.2 0.0 0.027 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1102) Pentapeptide_4 PF13599.1 gi|452211062|ref|YP_007491176.1| - 0.00094 18.9 0.2 0.0018 18.0 0.1 1.4 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) Plasmid_stabil PF05016.9 gi|452211062|ref|YP_007491176.1| - 0.014 15.7 0.1 0.022 15.1 0.1 1.3 1 0 0 1 1 1 0 Plasmid stabilisation system protein Pentapeptide_3 PF13576.1 gi|452211062|ref|YP_007491176.1| - 0.032 14.1 0.6 0.032 14.1 0.4 1.6 2 0 0 2 2 2 0 Pentapeptide repeats (9 copies) Abhydrolase_6 PF12697.2 gi|452211063|ref|YP_007491177.1| - 1.3e-27 97.2 0.0 1.8e-27 96.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|452211063|ref|YP_007491177.1| - 2.6e-18 66.4 0.4 1.4e-16 60.7 0.3 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|452211063|ref|YP_007491177.1| - 1.8e-17 63.4 0.4 5.1e-17 61.9 0.3 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.5 gi|452211063|ref|YP_007491177.1| - 1.7e-06 27.8 0.0 2.9e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Ndr PF03096.9 gi|452211063|ref|YP_007491177.1| - 3.9e-06 25.5 0.0 1.3e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 Ndr family Peptidase_S9 PF00326.16 gi|452211063|ref|YP_007491177.1| - 0.00013 21.2 0.2 0.14 11.3 0.1 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family BAAT_C PF08840.6 gi|452211063|ref|YP_007491177.1| - 0.001 18.8 0.4 0.0091 15.7 0.3 2.0 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase_phd PF10503.4 gi|452211063|ref|YP_007491177.1| - 0.0012 18.1 0.1 0.015 14.5 0.0 2.1 2 0 0 2 2 2 1 Esterase PHB depolymerase Abhydrolase_3 PF07859.8 gi|452211063|ref|YP_007491177.1| - 0.0019 17.8 0.6 0.088 12.3 0.1 2.3 1 1 0 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.13 gi|452211063|ref|YP_007491177.1| - 0.0086 15.3 0.0 0.077 12.2 0.0 2.0 2 0 0 2 2 2 1 Dienelactone hydrolase family DUF915 PF06028.6 gi|452211063|ref|YP_007491177.1| - 0.027 13.5 0.0 0.1 11.6 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) FtsL PF04999.8 gi|452211063|ref|YP_007491177.1| - 0.051 13.2 0.1 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Cell division protein FtsL DUF2852 PF11014.3 gi|452211063|ref|YP_007491177.1| - 0.053 13.4 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Ser_hydrolase PF06821.8 gi|452211063|ref|YP_007491177.1| - 0.063 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase DUF1057 PF06342.7 gi|452211063|ref|YP_007491177.1| - 0.07 11.9 0.0 0.1 11.3 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Abhydrolase_2 PF02230.11 gi|452211063|ref|YP_007491177.1| - 0.071 12.5 0.6 2.1 7.7 0.0 2.7 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase DEAD PF00270.24 gi|452211065|ref|YP_007491179.1| - 1.5e-49 167.6 0.5 1.2e-48 164.7 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452211065|ref|YP_007491179.1| - 6.5e-29 99.6 0.4 1.8e-28 98.1 0.2 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452211065|ref|YP_007491179.1| - 1.4e-07 31.5 0.0 2.8e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF1253 PF06862.7 gi|452211065|ref|YP_007491179.1| - 0.00011 20.7 0.1 0.41 8.9 0.0 3.0 2 1 0 3 3 3 2 Protein of unknown function (DUF1253) CMS1 PF14617.1 gi|452211065|ref|YP_007491179.1| - 0.00019 20.6 0.1 0.00063 18.8 0.0 1.7 1 1 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit V-ATPase_H_C PF11698.3 gi|452211065|ref|YP_007491179.1| - 0.0098 15.8 0.5 0.073 12.9 0.0 2.4 2 1 1 3 3 3 1 V-ATPase subunit H Flavi_DEAD PF07652.9 gi|452211065|ref|YP_007491179.1| - 0.011 15.4 0.1 0.084 12.6 0.0 2.5 1 1 1 2 2 2 0 Flavivirus DEAD domain AAA_19 PF13245.1 gi|452211065|ref|YP_007491179.1| - 0.014 15.1 0.1 0.051 13.3 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain AAA_22 PF13401.1 gi|452211065|ref|YP_007491179.1| - 0.078 13.1 0.4 0.43 10.7 0.3 2.3 1 1 0 1 1 1 0 AAA domain Catalase PF00199.14 gi|452211066|ref|YP_007491180.1| - 5.7e-177 588.1 3.6 6.9e-177 587.8 2.5 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.7 gi|452211066|ref|YP_007491180.1| - 3.1e-21 74.9 0.0 6.4e-21 73.9 0.0 1.6 1 0 0 1 1 1 1 Catalase-related immune-responsive DUF258 PF03193.11 gi|452211067|ref|YP_007491181.1| - 1.9e-23 82.3 0.0 3.6e-23 81.5 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function, DUF258 PMBR PF09373.5 gi|452211067|ref|YP_007491181.1| - 0.016 15.1 0.5 0.096 12.6 0.1 2.2 2 0 0 2 2 2 0 Pseudomurein-binding repeat DUF362 PF04015.7 gi|452211068|ref|YP_007491182.1| - 2.6e-28 98.9 1.3 3.3e-27 95.3 0.9 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|452211068|ref|YP_007491182.1| - 6.8e-17 60.2 17.7 1.4e-08 33.9 4.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211068|ref|YP_007491182.1| - 3.7e-15 56.0 36.6 1e-09 38.6 8.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211068|ref|YP_007491182.1| - 8.5e-14 50.7 14.5 9.2e-07 28.4 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211068|ref|YP_007491182.1| - 6.4e-11 41.8 10.4 1.4e-10 40.7 7.2 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211068|ref|YP_007491182.1| - 1.8e-10 40.8 11.1 5.9e-06 26.4 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211068|ref|YP_007491182.1| - 5.3e-09 35.7 12.1 7.1e-05 22.5 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211068|ref|YP_007491182.1| - 6.3e-09 35.2 15.6 6.1e-05 22.6 2.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211068|ref|YP_007491182.1| - 3.7e-08 34.0 12.1 0.00039 21.0 2.4 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|452211068|ref|YP_007491182.1| - 1.1e-07 32.1 8.1 0.00038 20.8 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211068|ref|YP_007491182.1| - 1.3e-07 31.3 11.6 0.0014 18.7 2.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452211068|ref|YP_007491182.1| - 2.4e-07 30.7 20.3 0.002 18.5 5.0 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211068|ref|YP_007491182.1| - 1.7e-06 27.9 22.8 1.9e-05 24.6 8.7 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452211068|ref|YP_007491182.1| - 2.2e-05 24.9 8.6 0.012 16.1 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452211068|ref|YP_007491182.1| - 0.00023 21.4 13.8 0.066 13.5 1.7 2.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|452211068|ref|YP_007491182.1| - 0.00037 19.5 0.2 0.00059 18.9 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) Fer4_13 PF13370.1 gi|452211068|ref|YP_007491182.1| - 0.00062 20.0 13.1 0.069 13.5 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|452211068|ref|YP_007491182.1| - 0.1 12.5 5.8 0.18 11.7 4.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF1757 PF08560.5 gi|452211068|ref|YP_007491182.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) DUF498 PF04430.9 gi|452211069|ref|YP_007491183.1| - 8e-16 57.5 0.0 8.9e-16 57.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) DUF3343 PF11823.3 gi|452211069|ref|YP_007491183.1| - 0.0061 15.7 0.7 0.011 15.0 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3343) Radical_SAM PF04055.16 gi|452211071|ref|YP_007491185.1| - 2.4e-18 66.8 0.0 5.2e-18 65.7 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452211071|ref|YP_007491185.1| - 0.00026 21.1 0.0 0.00082 19.5 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain DZR PF12773.2 gi|452211071|ref|YP_007491185.1| - 0.00067 19.4 0.2 0.00067 19.4 0.1 3.1 4 0 0 4 4 4 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|452211071|ref|YP_007491185.1| - 0.0053 15.9 3.6 0.0053 15.9 2.5 3.3 3 1 2 5 5 5 3 zinc-ribbon domain GFA PF04828.9 gi|452211071|ref|YP_007491185.1| - 0.0059 16.5 0.4 3 7.8 0.0 3.7 3 1 1 4 4 4 1 Glutathione-dependent formaldehyde-activating enzyme DNA_ligase_ZBD PF03119.11 gi|452211071|ref|YP_007491185.1| - 0.0064 16.1 2.2 0.29 10.8 0.0 3.0 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain YhfH PF14149.1 gi|452211071|ref|YP_007491185.1| - 0.012 15.3 1.1 0.17 11.6 0.1 2.8 2 0 0 2 2 2 0 YhfH-like protein TF_Zn_Ribbon PF08271.7 gi|452211071|ref|YP_007491185.1| - 0.047 13.0 1.2 3.4 7.0 0.0 2.8 2 0 0 2 2 2 0 TFIIB zinc-binding zf-C4_Topoisom PF01396.14 gi|452211071|ref|YP_007491185.1| - 0.26 10.8 9.3 1.2 8.6 0.0 3.4 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_2 PF13240.1 gi|452211071|ref|YP_007491185.1| - 1.3 8.6 15.6 1 8.9 0.1 4.2 5 0 0 5 5 5 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|452211071|ref|YP_007491185.1| - 1.3 8.7 8.4 0.51 10.0 1.1 3.2 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.2 gi|452211071|ref|YP_007491185.1| - 3.3 7.5 13.1 12 5.7 0.3 4.2 4 0 0 4 4 4 0 Transposase zinc-ribbon domain UPF0547 PF10571.4 gi|452211071|ref|YP_007491185.1| - 4.9 6.9 17.2 0.42 10.3 0.6 4.1 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 zf-dskA_traR PF01258.12 gi|452211071|ref|YP_007491185.1| - 6 6.7 10.1 0.49 10.1 0.2 3.2 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger DUF4177 PF13783.1 gi|452211072|ref|YP_007491186.1| - 9.2e-12 44.4 0.5 1.1e-11 44.2 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) FGGY_N PF00370.16 gi|452211073|ref|YP_007491187.1| - 0.043 13.1 0.0 0.044 13.1 0.0 1.0 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain SBP_bac_5 PF00496.17 gi|452211074|ref|YP_007491188.1| - 2.5e-91 306.2 0.0 3.2e-91 305.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.17 gi|452211075|ref|YP_007491189.1| - 7.8e-47 159.1 12.2 7.8e-47 159.1 8.4 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3693 PF12472.3 gi|452211075|ref|YP_007491189.1| - 0.0093 15.5 0.1 0.0093 15.5 0.1 2.3 3 0 0 3 3 3 1 Phage related protein Sial-lect-inser PF09264.5 gi|452211075|ref|YP_007491189.1| - 0.096 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Vibrio cholerae sialidase, lectin insertion BPD_transp_1 PF00528.17 gi|452211076|ref|YP_007491190.1| - 5e-29 101.1 9.2 5e-29 101.1 6.4 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|452211076|ref|YP_007491190.1| - 2.8e-09 36.2 0.1 2.8e-09 36.2 0.0 2.6 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.22 gi|452211077|ref|YP_007491191.1| - 1.9e-56 190.1 0.0 2.3e-30 105.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452211077|ref|YP_007491191.1| - 2e-17 64.0 1.6 0.00013 22.0 0.0 4.1 4 0 0 4 4 4 4 AAA domain oligo_HPY PF08352.7 gi|452211077|ref|YP_007491191.1| - 4e-13 49.4 0.7 8e-13 48.5 0.5 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.14 gi|452211077|ref|YP_007491191.1| - 3.8e-08 32.8 0.0 0.00087 18.5 0.0 2.6 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452211077|ref|YP_007491191.1| - 1e-07 31.3 0.1 0.0065 15.9 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|452211077|ref|YP_007491191.1| - 3.2e-07 30.5 5.2 0.022 14.8 0.7 3.6 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|452211077|ref|YP_007491191.1| - 3.5e-06 27.1 0.9 0.0096 15.9 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.1 gi|452211077|ref|YP_007491191.1| - 1.5e-05 25.2 0.2 0.17 12.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|452211077|ref|YP_007491191.1| - 0.00013 20.9 1.3 0.16 10.8 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain AAA_23 PF13476.1 gi|452211077|ref|YP_007491191.1| - 0.0002 21.7 0.1 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.9 gi|452211077|ref|YP_007491191.1| - 0.00034 20.3 1.7 0.7 9.6 0.1 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.24 gi|452211077|ref|YP_007491191.1| - 0.00046 20.4 0.5 0.43 10.7 0.1 2.6 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) DUF258 PF03193.11 gi|452211077|ref|YP_007491191.1| - 0.00049 19.3 0.6 0.051 12.7 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function, DUF258 RNA_helicase PF00910.17 gi|452211077|ref|YP_007491191.1| - 0.00054 20.1 0.5 0.5 10.5 0.1 2.4 2 0 0 2 2 2 1 RNA helicase AAA_25 PF13481.1 gi|452211077|ref|YP_007491191.1| - 0.00069 19.0 0.3 1.3 8.4 0.0 3.3 3 0 0 3 3 3 1 AAA domain AAA_17 PF13207.1 gi|452211077|ref|YP_007491191.1| - 0.00086 20.1 0.1 2 9.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|452211077|ref|YP_007491191.1| - 0.0013 18.4 0.7 1.6 8.4 0.0 2.5 2 1 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B Rad17 PF03215.10 gi|452211077|ref|YP_007491191.1| - 0.0015 17.3 0.1 1 7.9 0.0 2.1 2 0 0 2 2 2 2 Rad17 cell cycle checkpoint protein T2SE PF00437.15 gi|452211077|ref|YP_007491191.1| - 0.0019 17.1 0.2 0.41 9.5 0.2 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein Mg_chelatase PF01078.16 gi|452211077|ref|YP_007491191.1| - 0.0025 16.9 0.1 0.96 8.5 0.0 2.8 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI PRK PF00485.13 gi|452211077|ref|YP_007491191.1| - 0.0032 17.0 0.1 1.9 7.9 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.1 gi|452211077|ref|YP_007491191.1| - 0.0037 17.1 0.1 1.4 8.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|452211077|ref|YP_007491191.1| - 0.0055 16.1 0.2 12 5.2 0.0 3.3 3 0 0 3 3 3 0 AAA-like domain UPF0079 PF02367.12 gi|452211077|ref|YP_007491191.1| - 0.0064 16.1 4.2 0.037 13.6 0.3 2.6 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 MMR_HSR1 PF01926.18 gi|452211077|ref|YP_007491191.1| - 0.013 15.4 0.2 2.7 7.9 0.0 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.7 gi|452211077|ref|YP_007491191.1| - 0.014 15.0 3.2 1.2 8.7 0.3 2.6 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.10 gi|452211077|ref|YP_007491191.1| - 0.017 14.8 2.6 1.4 8.6 0.4 2.5 2 0 0 2 2 2 0 NTPase G-alpha PF00503.15 gi|452211077|ref|YP_007491191.1| - 0.019 13.6 0.1 3.8 6.0 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit FtsK_SpoIIIE PF01580.13 gi|452211077|ref|YP_007491191.1| - 0.022 14.2 0.1 7.1 6.0 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family ATP-synt_ab PF00006.20 gi|452211077|ref|YP_007491191.1| - 0.024 14.1 0.0 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain PduV-EutP PF10662.4 gi|452211077|ref|YP_007491191.1| - 0.08 12.4 2.7 2.5 7.5 0.1 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF87 PF01935.12 gi|452211077|ref|YP_007491191.1| - 0.09 12.5 2.1 3.9 7.2 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF87 KaiC PF06745.8 gi|452211077|ref|YP_007491191.1| - 0.1 11.6 1.5 2.3 7.2 0.1 2.3 2 0 0 2 2 2 0 KaiC Arch_ATPase PF01637.13 gi|452211077|ref|YP_007491191.1| - 0.12 12.0 0.6 10 5.7 0.0 2.4 2 0 0 2 2 2 0 Archaeal ATPase IstB_IS21 PF01695.12 gi|452211077|ref|YP_007491191.1| - 0.12 11.7 0.2 16 4.8 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein Viral_helicase1 PF01443.13 gi|452211077|ref|YP_007491191.1| - 0.13 11.7 0.3 10 5.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AIG1 PF04548.11 gi|452211077|ref|YP_007491191.1| - 0.23 10.5 1.0 4.1 6.4 0.1 2.3 2 0 0 2 2 2 0 AIG1 family AAA_15 PF13175.1 gi|452211077|ref|YP_007491191.1| - 0.34 9.9 0.3 3.7 6.4 0.0 2.5 4 0 0 4 4 4 0 AAA ATPase domain Pox_A32 PF04665.7 gi|452211077|ref|YP_007491191.1| - 1.9 7.7 4.1 2.2 7.5 0.1 2.6 3 0 0 3 3 3 0 Poxvirus A32 protein Methyltransf_2 PF00891.13 gi|452211078|ref|YP_007491192.1| - 3.3e-11 42.8 0.0 5.9e-11 42.0 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase Methyltransf_18 PF12847.2 gi|452211078|ref|YP_007491192.1| - 6.5e-08 33.1 0.0 1.5e-07 31.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|452211078|ref|YP_007491192.1| - 0.003 17.9 0.0 0.0074 16.7 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452211078|ref|YP_007491192.1| - 0.0068 16.0 0.0 0.016 14.7 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|452211078|ref|YP_007491192.1| - 0.0094 15.9 0.0 0.035 14.1 0.0 1.9 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|452211078|ref|YP_007491192.1| - 0.015 14.7 0.0 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Fe_dep_repress PF01325.14 gi|452211079|ref|YP_007491193.1| - 1e-18 66.9 0.5 1.7e-18 66.3 0.4 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|452211079|ref|YP_007491193.1| - 1.6e-16 59.7 1.2 3.3e-16 58.7 0.8 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_45 PF14947.1 gi|452211079|ref|YP_007491193.1| - 8.8e-05 22.2 1.1 0.00018 21.2 0.8 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix LexA_DNA_bind PF01726.11 gi|452211079|ref|YP_007491193.1| - 0.0001 21.7 0.0 0.00018 20.9 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain MarR_2 PF12802.2 gi|452211079|ref|YP_007491193.1| - 0.00015 21.3 0.0 0.0004 19.9 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.1 gi|452211079|ref|YP_007491193.1| - 0.0002 20.7 0.0 0.00042 19.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|452211079|ref|YP_007491193.1| - 0.00026 20.6 0.0 0.00052 19.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|452211079|ref|YP_007491193.1| - 0.00036 20.1 0.0 0.00071 19.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|452211079|ref|YP_007491193.1| - 0.0018 17.9 0.1 0.0046 16.6 0.1 1.8 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.5 gi|452211079|ref|YP_007491193.1| - 0.0019 17.8 0.3 0.0072 16.0 0.2 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain Penicillinase_R PF03965.11 gi|452211079|ref|YP_007491193.1| - 0.002 18.1 0.0 0.0076 16.3 0.0 2.0 1 1 0 1 1 1 1 Penicillinase repressor FeoC PF09012.5 gi|452211079|ref|YP_007491193.1| - 0.0023 17.5 0.0 0.0048 16.5 0.0 1.6 1 1 0 1 1 1 1 FeoC like transcriptional regulator Rrf2 PF02082.15 gi|452211079|ref|YP_007491193.1| - 0.0024 17.9 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.1 gi|452211079|ref|YP_007491193.1| - 0.0031 17.7 0.1 0.017 15.4 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|452211079|ref|YP_007491193.1| - 0.0075 15.8 0.0 0.023 14.2 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain SWIRM PF04433.12 gi|452211079|ref|YP_007491193.1| - 0.017 15.2 0.0 0.1 12.7 0.0 2.0 2 0 0 2 2 2 0 SWIRM domain Mrr_N PF14338.1 gi|452211079|ref|YP_007491193.1| - 0.018 15.1 0.5 0.34 11.0 0.1 2.3 2 0 0 2 2 2 0 Mrr N-terminal domain HTH_40 PF14493.1 gi|452211079|ref|YP_007491193.1| - 0.019 15.2 0.1 0.096 12.9 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_6 PF01418.12 gi|452211079|ref|YP_007491193.1| - 0.063 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family CENP-B_N PF04218.8 gi|452211079|ref|YP_007491193.1| - 0.067 12.6 0.0 0.17 11.3 0.0 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Phage_TAC PF06222.6 gi|452211079|ref|YP_007491193.1| - 0.073 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone HTH_Crp_2 PF13545.1 gi|452211079|ref|YP_007491193.1| - 0.097 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_DeoR PF08220.7 gi|452211079|ref|YP_007491193.1| - 0.11 12.0 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_28 PF13518.1 gi|452211079|ref|YP_007491193.1| - 0.14 12.1 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain FeoC PF09012.5 gi|452211082|ref|YP_007491196.1| - 1.1e-20 73.0 2.3 1.1e-20 73.0 1.6 1.3 1 1 0 1 1 1 1 FeoC like transcriptional regulator HTH_27 PF13463.1 gi|452211082|ref|YP_007491196.1| - 0.00026 21.2 0.2 0.13 12.5 0.0 2.1 2 0 0 2 2 2 2 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|452211082|ref|YP_007491196.1| - 0.0057 16.5 0.2 0.045 13.6 0.0 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.2 gi|452211082|ref|YP_007491196.1| - 0.0095 15.5 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|452211082|ref|YP_007491196.1| - 0.016 14.9 0.9 2.9 7.7 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DUF4423 PF14394.1 gi|452211082|ref|YP_007491196.1| - 0.019 14.5 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) FaeA PF04703.7 gi|452211082|ref|YP_007491196.1| - 0.026 14.6 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein MarR PF01047.17 gi|452211082|ref|YP_007491196.1| - 0.048 13.3 0.2 0.1 12.2 0.1 1.6 2 0 0 2 2 2 0 MarR family TrmB PF01978.14 gi|452211082|ref|YP_007491196.1| - 0.051 13.2 0.0 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|452211082|ref|YP_007491196.1| - 0.056 13.4 0.5 2.5 8.2 0.0 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain RPA_C PF08784.6 gi|452211082|ref|YP_007491196.1| - 0.082 13.3 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Replication protein A C terminal HTH_24 PF13412.1 gi|452211082|ref|YP_007491196.1| - 0.11 11.8 0.1 0.21 11.0 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_28 PF13518.1 gi|452211082|ref|YP_007491196.1| - 0.12 12.3 0.0 0.56 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|452211082|ref|YP_007491196.1| - 0.13 12.4 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_5 PF01022.15 gi|452211082|ref|YP_007491196.1| - 0.13 11.9 0.8 0.26 10.9 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family FeoB_N PF02421.13 gi|452211083|ref|YP_007491197.1| - 6.9e-64 213.8 0.4 1e-63 213.2 0.3 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|452211083|ref|YP_007491197.1| - 2.6e-47 159.2 22.9 5.6e-32 109.8 2.2 2.8 3 0 0 3 3 3 2 Nucleoside recognition FeoB_C PF07664.7 gi|452211083|ref|YP_007491197.1| - 5.6e-18 64.1 0.7 5.6e-18 64.1 0.5 2.6 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.18 gi|452211083|ref|YP_007491197.1| - 3.6e-16 59.1 0.1 7.3e-16 58.1 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.5 gi|452211083|ref|YP_007491197.1| - 0.00026 20.2 0.0 0.00054 19.2 0.0 1.5 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.11 gi|452211083|ref|YP_007491197.1| - 0.031 13.3 0.0 0.05 12.6 0.0 1.3 1 0 0 1 1 1 0 AIG1 family NTPase_1 PF03266.10 gi|452211083|ref|YP_007491197.1| - 0.033 13.8 0.2 0.059 13.0 0.1 1.4 1 0 0 1 1 1 0 NTPase ArgK PF03308.11 gi|452211083|ref|YP_007491197.1| - 0.044 12.5 0.5 2.6 6.7 0.1 2.2 2 0 0 2 2 2 0 ArgK protein Miro PF08477.8 gi|452211083|ref|YP_007491197.1| - 0.075 13.5 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein Dynamin_N PF00350.18 gi|452211083|ref|YP_007491197.1| - 0.13 12.1 0.1 15 5.3 0.0 2.4 2 0 0 2 2 2 0 Dynamin family GTP_EFTU PF00009.22 gi|452211083|ref|YP_007491197.1| - 0.18 11.2 0.2 6.2 6.1 0.2 2.5 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain FeoA PF04023.9 gi|452211084|ref|YP_007491198.1| - 5.2e-19 67.9 0.1 5.9e-19 67.8 0.1 1.0 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.9 gi|452211085|ref|YP_007491199.1| - 8.6e-17 60.8 0.1 9.5e-17 60.7 0.0 1.0 1 0 0 1 1 1 1 FeoA domain zf-ribbon_3 PF13248.1 gi|452211086|ref|YP_007491200.1| - 3.7e-06 25.9 5.2 0.02 14.1 0.1 2.7 2 1 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|452211086|ref|YP_007491200.1| - 1.8e-05 24.4 0.3 3.3e-05 23.6 0.1 1.5 2 0 0 2 2 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452211086|ref|YP_007491200.1| - 3.8e-05 23.0 3.0 0.02 14.3 0.1 2.9 3 0 0 3 3 3 2 zinc-ribbon domain UPF0547 PF10571.4 gi|452211086|ref|YP_007491200.1| - 0.00024 20.6 1.7 0.19 11.4 0.2 2.3 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 YhfH PF14149.1 gi|452211086|ref|YP_007491200.1| - 0.00025 20.7 0.7 0.015 15.0 0.1 2.5 2 0 0 2 2 2 1 YhfH-like protein Zn-ribbon_8 PF09723.5 gi|452211086|ref|YP_007491200.1| - 0.0012 18.7 0.6 1.9 8.5 0.0 2.4 2 0 0 2 2 2 2 Zinc ribbon domain zf-C4_Topoisom PF01396.14 gi|452211086|ref|YP_007491200.1| - 0.0043 16.5 1.4 2.3 7.8 0.1 2.3 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger GFA PF04828.9 gi|452211086|ref|YP_007491200.1| - 0.0048 16.8 0.4 0.1 12.5 0.0 2.2 1 1 1 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.1 gi|452211086|ref|YP_007491200.1| - 0.03 14.0 0.9 1.2 8.8 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-FPG_IleRS PF06827.9 gi|452211086|ref|YP_007491200.1| - 0.031 13.9 2.0 2.1 8.0 0.3 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-NADH-PPase PF09297.6 gi|452211086|ref|YP_007491200.1| - 0.045 13.2 2.1 0.47 10.0 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-dskA_traR PF01258.12 gi|452211086|ref|YP_007491200.1| - 0.062 13.0 2.2 0.39 10.5 0.4 2.2 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger UPF0167 PF03691.9 gi|452211086|ref|YP_007491200.1| - 0.064 12.6 0.1 0.16 11.3 0.0 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0167) zf-RING_3 PF14369.1 gi|452211086|ref|YP_007491200.1| - 0.073 13.0 0.9 12 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-finger zf-ISL3 PF14690.1 gi|452211086|ref|YP_007491200.1| - 0.089 12.8 0.7 11 6.1 0.0 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Auto_anti-p27 PF06677.7 gi|452211086|ref|YP_007491200.1| - 0.12 12.1 1.1 9.4 6.0 0.0 2.4 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.7 gi|452211086|ref|YP_007491200.1| - 0.14 11.5 4.7 0.63 9.4 0.2 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding NOB1_Zn_bind PF08772.6 gi|452211086|ref|YP_007491200.1| - 0.17 11.7 4.1 0.3 10.9 0.2 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-IS66 PF13005.2 gi|452211086|ref|YP_007491200.1| - 0.18 11.7 3.0 2.1 8.4 0.0 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 DUF2256 PF10013.4 gi|452211086|ref|YP_007491200.1| - 0.19 11.5 1.0 1 9.1 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) RNA_POL_M_15KD PF02150.11 gi|452211086|ref|YP_007491200.1| - 0.32 10.7 4.8 1.8 8.3 3.3 2.1 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF1610 PF07754.6 gi|452211086|ref|YP_007491200.1| - 2 8.6 9.1 7.6 6.7 1.7 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Zn_Tnp_IS1595 PF12760.2 gi|452211086|ref|YP_007491200.1| - 3.6 7.4 4.7 16 5.3 0.2 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain NUDIX PF00293.23 gi|452211087|ref|YP_007491201.1| - 6.4e-14 51.7 0.0 8.3e-14 51.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain MttA_Hcf106 PF02416.11 gi|452211088|ref|YP_007491202.1| - 1.4e-17 62.4 1.4 1.7e-17 62.2 1.0 1.4 1 1 0 1 1 1 1 mttA/Hcf106 family RHH_1 PF01402.16 gi|452211088|ref|YP_007491202.1| - 0.15 11.9 0.2 5.1 7.1 0.0 2.8 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family MttA_Hcf106 PF02416.11 gi|452211089|ref|YP_007491203.1| - 1.1e-12 46.8 5.5 2.3e-12 45.8 3.8 1.6 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1510 PF07423.6 gi|452211089|ref|YP_007491203.1| - 0.007 15.7 0.2 0.0085 15.4 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) NARP1 PF12569.3 gi|452211089|ref|YP_007491203.1| - 7.7 5.1 8.4 9 4.9 5.8 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TatC PF00902.13 gi|452211090|ref|YP_007491204.1| - 8.6e-50 169.1 26.5 1e-49 168.8 18.4 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) EamA PF00892.15 gi|452211093|ref|YP_007491207.1| - 3.8e-20 72.2 13.7 4.4e-20 71.9 9.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family EmrE PF13536.1 gi|452211093|ref|YP_007491207.1| - 2.2e-05 24.6 8.1 6.7e-05 23.0 5.6 1.8 1 1 0 1 1 1 1 Multidrug resistance efflux transporter TPT PF03151.11 gi|452211093|ref|YP_007491207.1| - 0.01 15.5 9.8 0.02 14.5 6.8 1.5 1 1 0 1 1 1 0 Triose-phosphate Transporter family UPF0546 PF10639.4 gi|452211093|ref|YP_007491207.1| - 0.021 14.6 3.5 0.021 14.6 1.6 1.6 1 1 0 1 1 1 0 Uncharacterised protein family UPF0546 DAD PF02109.11 gi|452211093|ref|YP_007491207.1| - 0.28 11.2 5.1 0.18 11.8 2.2 1.7 1 1 1 2 2 2 0 DAD family PepSY_TM_2 PF13703.1 gi|452211093|ref|YP_007491207.1| - 2.5 8.3 5.5 3.7 7.7 0.1 2.7 1 1 1 2 2 2 0 PepSY-associated TM helix PetL PF05115.9 gi|452211094|ref|YP_007491208.1| - 5.7 6.9 7.4 6.3 6.8 3.1 2.6 1 1 1 2 2 2 0 Cytochrome B6-F complex subunit VI (PetL) Rnf-Nqr PF02508.9 gi|452211095|ref|YP_007491209.1| - 0.0095 15.5 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein ATPase_gene1 PF09527.5 gi|452211095|ref|YP_007491209.1| - 0.033 13.9 6.1 0.051 13.3 4.2 1.3 1 1 0 1 1 1 0 Putative F0F1-ATPase subunit (ATPase_gene1) DUF3021 PF11457.3 gi|452211095|ref|YP_007491209.1| - 0.038 13.8 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF4191 PF13829.1 gi|452211095|ref|YP_007491209.1| - 0.12 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) EamA PF00892.15 gi|452211097|ref|YP_007491211.1| - 1.9e-30 105.4 30.4 2.1e-16 60.0 5.4 2.4 2 1 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|452211097|ref|YP_007491211.1| - 1.6e-07 31.4 27.2 2.7e-06 27.5 6.5 3.5 3 1 0 3 3 3 2 Multidrug resistance efflux transporter UAA PF08449.6 gi|452211097|ref|YP_007491211.1| - 0.0035 16.3 14.2 0.022 13.6 9.9 2.0 1 1 0 1 1 1 1 UAA transporter family DUF914 PF06027.7 gi|452211097|ref|YP_007491211.1| - 0.31 9.8 9.2 0.94 8.2 3.5 2.2 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF914) TPT PF03151.11 gi|452211097|ref|YP_007491211.1| - 0.44 10.1 21.9 0.27 10.8 3.6 3.5 2 2 0 2 2 2 0 Triose-phosphate Transporter family TPR_11 PF13414.1 gi|452211099|ref|YP_007491213.1| - 2.1e-51 171.4 20.9 1.1e-12 47.4 0.1 5.5 2 2 3 6 6 6 6 TPR repeat TPR_17 PF13431.1 gi|452211099|ref|YP_007491213.1| - 2.7e-47 155.0 6.9 8.5e-05 22.4 0.0 9.4 9 1 0 9 9 9 8 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452211099|ref|YP_007491213.1| - 4.7e-46 151.0 14.6 2.3e-05 23.9 0.0 9.4 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211099|ref|YP_007491213.1| - 4.9e-40 135.3 3.5 4.7e-09 36.6 0.0 5.2 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211099|ref|YP_007491213.1| - 5e-37 125.6 34.2 1.8e-08 34.2 0.8 6.3 2 2 5 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452211099|ref|YP_007491213.1| - 7e-37 123.5 13.8 1.1e-05 24.7 0.0 9.0 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211099|ref|YP_007491213.1| - 1.9e-34 114.8 15.6 0.00042 19.8 0.0 9.6 7 1 3 10 10 10 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211099|ref|YP_007491213.1| - 5.2e-28 94.5 12.0 0.00011 21.6 0.0 9.5 9 1 1 10 10 10 7 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211099|ref|YP_007491213.1| - 6e-28 94.7 5.8 0.00072 19.9 0.0 9.1 1 1 8 9 9 9 7 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211099|ref|YP_007491213.1| - 1.2e-25 89.5 4.5 4.7e-05 23.6 0.1 5.5 3 1 3 6 6 6 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211099|ref|YP_007491213.1| - 1.7e-16 59.8 1.4 0.0025 17.6 0.0 6.0 3 2 2 6 6 6 4 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211099|ref|YP_007491213.1| - 2.9e-15 55.6 21.2 0.0059 16.4 0.0 8.4 9 0 0 9 9 8 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211099|ref|YP_007491213.1| - 9e-12 44.9 11.5 0.0052 16.8 0.4 4.8 1 1 5 6 6 6 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.9 gi|452211099|ref|YP_007491213.1| - 3.9e-11 42.2 0.0 1.9 9.1 0.0 7.2 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|452211099|ref|YP_007491213.1| - 2.4e-10 39.9 1.2 0.00054 19.1 0.0 3.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452211099|ref|YP_007491213.1| - 6.7e-10 38.7 8.9 0.3 11.6 0.0 8.0 9 0 0 9 9 8 1 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452211099|ref|YP_007491213.1| - 1.7e-09 37.6 1.0 0.051 13.6 0.0 5.2 3 1 2 5 5 5 2 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|452211099|ref|YP_007491213.1| - 2.2e-07 30.3 0.3 0.058 12.5 0.0 4.6 2 1 2 5 5 5 1 Coatomer epsilon subunit NARP1 PF12569.3 gi|452211099|ref|YP_007491213.1| - 2.4e-05 23.3 5.8 3.9 6.1 0.4 5.0 1 1 5 6 6 6 1 NMDA receptor-regulated protein 1 BTAD PF03704.12 gi|452211099|ref|YP_007491213.1| - 3.3e-05 24.2 6.4 0.49 10.7 0.3 4.0 1 1 2 3 3 3 2 Bacterial transcriptional activator domain Sec16_C PF12931.2 gi|452211099|ref|YP_007491213.1| - 0.069 12.8 0.8 6.8 6.3 0.1 3.8 2 2 1 3 3 3 0 Sec23-binding domain of Sec16 MIT PF04212.13 gi|452211099|ref|YP_007491213.1| - 0.31 10.9 4.8 8.9 6.2 0.1 4.2 4 2 0 4 4 4 0 MIT (microtubule interacting and transport) domain PvlArgDC PF01862.11 gi|452211100|ref|YP_007491214.1| - 1.4e-66 223.1 0.0 1.6e-66 222.9 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) MVL PF12151.3 gi|452211100|ref|YP_007491214.1| - 0.062 12.9 0.4 0.098 12.3 0.2 1.3 1 0 0 1 1 1 0 Mannan-binding protein Hydantoinase_A PF01968.13 gi|452211101|ref|YP_007491215.1| - 8e-79 264.7 0.1 3.9e-78 262.4 0.0 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|452211101|ref|YP_007491215.1| - 2.7e-44 150.7 0.2 4.8e-41 140.1 0.0 2.6 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|452211101|ref|YP_007491215.1| - 6.1e-06 24.8 0.6 0.041 12.2 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|452211101|ref|YP_007491215.1| - 0.012 14.9 0.0 0.48 9.6 0.0 2.4 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Hydantoinase_A PF01968.13 gi|452211102|ref|YP_007491216.1| - 2.1e-75 253.5 0.0 3.1e-74 249.6 0.0 2.5 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|452211102|ref|YP_007491216.1| - 2e-45 154.4 0.2 6.4e-42 143.0 0.0 2.5 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|452211102|ref|YP_007491216.1| - 1.6e-05 23.4 0.3 0.084 11.1 0.1 2.2 2 0 0 2 2 2 2 MutL protein EutA PF06277.6 gi|452211102|ref|YP_007491216.1| - 0.076 11.6 0.3 1.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutA BcrAD_BadFG PF01869.15 gi|452211102|ref|YP_007491216.1| - 0.085 12.1 0.2 2.5 7.3 0.0 2.4 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Wax2_C PF12076.3 gi|452211104|ref|YP_007491218.1| - 0.067 12.9 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 WAX2 C-terminal domain Plasmid_stabil PF05016.9 gi|452211105|ref|YP_007491219.1| - 2.5e-07 31.0 0.1 2.7e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF45 PF01863.12 gi|452211107|ref|YP_007491221.1| - 2.9e-61 206.8 0.4 3.4e-61 206.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.5 gi|452211107|ref|YP_007491221.1| - 2.6e-05 24.1 0.1 4.3e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 WLM domain SprT-like PF10263.4 gi|452211107|ref|YP_007491221.1| - 0.021 14.4 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 SprT-like family Vir_act_alpha_C PF10400.4 gi|452211107|ref|YP_007491221.1| - 0.023 15.0 0.0 0.055 13.8 0.0 1.5 1 0 0 1 1 1 0 Virulence activator alpha C-term UPF0506 PF11703.3 gi|452211108|ref|YP_007491222.1| - 0.08 12.9 0.4 0.22 11.4 0.3 1.7 1 1 0 1 1 1 0 UPF0506 RseC_MucC PF04246.7 gi|452211109|ref|YP_007491223.1| - 0.0074 15.8 0.6 0.0076 15.8 0.4 1.0 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC YjgP_YjgQ PF03739.9 gi|452211109|ref|YP_007491223.1| - 0.015 14.0 3.1 0.017 13.8 2.1 1.0 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family DUF3040 PF11239.3 gi|452211109|ref|YP_007491223.1| - 0.096 12.7 2.4 0.11 12.5 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) UPF0239 PF06783.6 gi|452211109|ref|YP_007491223.1| - 0.19 11.6 1.5 0.23 11.4 1.0 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0239) Tetraspannin PF00335.15 gi|452211109|ref|YP_007491223.1| - 0.28 10.4 2.9 0.4 9.9 2.0 1.3 1 0 0 1 1 1 0 Tetraspanin family DUF1700 PF08006.6 gi|452211109|ref|YP_007491223.1| - 0.6 9.3 3.8 0.8 8.9 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF308 PF03729.8 gi|452211109|ref|YP_007491223.1| - 1.6 8.7 11.0 2 8.4 7.6 1.1 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) DUF2207 PF09972.4 gi|452211109|ref|YP_007491223.1| - 6.2 5.2 8.2 6.7 5.1 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Lar_restr_allev PF14354.1 gi|452211110|ref|YP_007491224.1| - 0.0085 16.3 6.8 0.13 12.5 0.1 3.3 1 1 1 3 3 3 1 Restriction alleviation protein Lar DUF3797 PF12677.2 gi|452211110|ref|YP_007491224.1| - 0.009 15.6 12.3 0.055 13.0 0.1 4.6 5 0 0 5 5 5 2 Domain of unknown function (DUF3797) 2TM PF13239.1 gi|452211110|ref|YP_007491224.1| - 0.027 14.5 2.0 0.046 13.7 1.4 1.4 1 0 0 1 1 1 0 2TM domain zf-ribbon_3 PF13248.1 gi|452211110|ref|YP_007491224.1| - 0.044 13.0 9.8 0.34 10.1 0.1 3.9 4 0 0 4 4 4 0 zinc-ribbon domain DsbB PF02600.11 gi|452211110|ref|YP_007491224.1| - 0.057 13.1 0.1 0.095 12.4 0.1 1.3 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB Zn_Tnp_IS1595 PF12760.2 gi|452211110|ref|YP_007491224.1| - 0.083 12.7 0.8 0.083 12.7 0.6 3.0 2 1 0 2 2 2 0 Transposase zinc-ribbon domain DUF3784 PF12650.2 gi|452211110|ref|YP_007491224.1| - 0.14 12.1 7.8 0.14 12.1 4.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) DZR PF12773.2 gi|452211110|ref|YP_007491224.1| - 0.22 11.3 11.5 1.4e+02 2.4 8.0 3.2 1 1 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.5 gi|452211110|ref|YP_007491224.1| - 0.33 10.4 15.8 0.53 9.8 0.2 4.7 4 1 0 4 4 4 0 A2L zinc ribbon domain Ribosomal_L37e PF01907.14 gi|452211110|ref|YP_007491224.1| - 0.6 9.9 7.5 4.2 7.2 0.0 3.6 4 0 0 4 4 3 0 Ribosomal protein L37e SdpI PF13630.1 gi|452211110|ref|YP_007491224.1| - 0.71 9.6 6.2 1.1 8.9 4.3 1.3 1 0 0 1 1 1 0 SdpI/YhfL protein family FUR PF01475.14 gi|452211110|ref|YP_007491224.1| - 0.77 9.7 4.4 2.3 8.1 0.1 3.0 1 1 2 3 3 3 0 Ferric uptake regulator family HypA PF01155.14 gi|452211110|ref|YP_007491224.1| - 0.83 9.3 10.3 1.7 8.3 1.4 2.4 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Desulfoferrod_N PF06397.7 gi|452211110|ref|YP_007491224.1| - 1.9 7.9 14.3 0.98 8.8 0.3 3.8 4 0 0 4 4 4 0 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.10 gi|452211110|ref|YP_007491224.1| - 2.1 8.1 14.0 1.7 8.4 0.1 3.7 4 0 0 4 4 3 0 BED zinc finger zinc_ribbon_2 PF13240.1 gi|452211110|ref|YP_007491224.1| - 2.8 7.5 15.6 0.96 9.0 1.1 3.8 4 0 0 4 4 4 0 zinc-ribbon domain FYVE PF01363.16 gi|452211110|ref|YP_007491224.1| - 5.8 6.8 16.2 37 4.3 8.4 3.4 2 1 0 2 2 2 0 FYVE zinc finger TF_Zn_Ribbon PF08271.7 gi|452211110|ref|YP_007491224.1| - 6.5 6.1 10.2 13 5.1 0.1 4.2 4 0 0 4 4 4 0 TFIIB zinc-binding C1_1 PF00130.17 gi|452211110|ref|YP_007491224.1| - 7.9 6.2 14.0 0.15 11.8 1.1 3.0 3 1 0 3 3 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) YesK PF14150.1 gi|452211110|ref|YP_007491224.1| - 9.3 6.4 12.1 3.7 7.7 1.2 2.5 3 0 0 3 3 2 0 YesK-like protein Polysacc_synt_C PF14667.1 gi|452211111|ref|YP_007491225.1| - 0.021 14.6 0.4 0.024 14.4 0.3 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain DUF2929 PF11151.3 gi|452211111|ref|YP_007491225.1| - 0.03 14.3 0.4 0.049 13.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) DUF4418 PF14387.1 gi|452211111|ref|YP_007491225.1| - 0.032 13.9 1.3 0.038 13.7 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4418) CDP-OH_P_tran_2 PF08009.6 gi|452211111|ref|YP_007491225.1| - 0.15 11.7 0.4 0.15 11.7 0.3 1.7 2 0 0 2 2 2 0 CDP-alcohol phosphatidyltransferase 2 Oxidored_q4 PF00507.14 gi|452211111|ref|YP_007491225.1| - 0.18 11.6 2.2 0.25 11.2 1.5 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HypA PF01155.14 gi|452211112|ref|YP_007491226.1| - 0.016 14.8 5.6 0.96 9.1 0.1 2.4 1 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family YhfH PF14149.1 gi|452211112|ref|YP_007491226.1| - 0.058 13.1 6.8 3.6 7.4 0.0 3.5 3 0 0 3 3 3 0 YhfH-like protein zf-ribbon_3 PF13248.1 gi|452211112|ref|YP_007491226.1| - 0.14 11.3 6.5 19 4.6 0.8 3.8 3 1 0 3 3 3 0 zinc-ribbon domain DZR PF12773.2 gi|452211112|ref|YP_007491226.1| - 0.19 11.5 8.1 30 4.5 5.6 2.9 1 1 0 1 1 1 0 Double zinc ribbon FYVE PF01363.16 gi|452211112|ref|YP_007491226.1| - 0.29 11.0 9.2 0.37 10.7 0.8 2.8 1 1 1 2 2 2 0 FYVE zinc finger zf-AN1 PF01428.11 gi|452211112|ref|YP_007491226.1| - 0.44 10.4 12.7 5.1 7.0 0.1 4.1 4 0 0 4 4 4 0 AN1-like Zinc finger zf-trcl PF13451.1 gi|452211112|ref|YP_007491226.1| - 1.2 8.8 8.8 3.2 7.4 0.1 3.8 4 0 0 4 4 4 0 Probable zinc-binding domain zf-C2HC_2 PF13913.1 gi|452211112|ref|YP_007491226.1| - 3.2 7.5 11.2 0.15 11.7 0.4 3.3 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-FCS PF06467.9 gi|452211112|ref|YP_007491226.1| - 3.8 7.2 16.1 4 7.1 0.1 4.1 4 0 0 4 4 4 0 MYM-type Zinc finger with FCS sequence motif VIT1 PF01988.14 gi|452211113|ref|YP_007491227.1| - 0.0085 15.6 0.1 0.0094 15.4 0.1 1.0 1 0 0 1 1 1 1 VIT family DUF2226 PF09987.4 gi|452211113|ref|YP_007491227.1| - 0.073 12.1 0.7 0.077 12.1 0.5 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2226) DUF4158 PF13700.1 gi|452211113|ref|YP_007491227.1| - 0.074 12.5 0.1 0.08 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) DUF3936 PF13072.1 gi|452211113|ref|YP_007491227.1| - 0.079 12.4 0.2 0.079 12.4 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3936) RecX PF02631.11 gi|452211113|ref|YP_007491227.1| - 0.097 12.8 0.1 0.12 12.5 0.1 1.0 1 0 0 1 1 1 0 RecX family DNA_pol_alpha_N PF12254.3 gi|452211113|ref|YP_007491227.1| - 0.16 11.7 2.3 0.2 11.4 1.6 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal DAO PF01266.19 gi|452211115|ref|YP_007491229.1| - 5e-15 55.2 0.3 5.2e-07 28.9 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|452211115|ref|YP_007491229.1| - 1.2e-13 50.7 2.3 3.5e-05 22.8 0.0 3.2 3 0 0 3 3 3 3 FAD binding domain GIDA PF01134.17 gi|452211115|ref|YP_007491229.1| - 1.3e-12 47.2 0.2 0.00068 18.6 0.0 3.2 3 0 0 3 3 3 3 Glucose inhibited division protein A Pyr_redox_2 PF07992.9 gi|452211115|ref|YP_007491229.1| - 1.4e-12 47.9 0.3 6.4e-06 26.1 0.2 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|452211115|ref|YP_007491229.1| - 3.8e-08 32.2 1.7 1.7e-06 26.7 0.1 2.5 3 0 0 3 3 3 1 HI0933-like protein Thi4 PF01946.12 gi|452211115|ref|YP_007491229.1| - 2.8e-06 26.5 0.3 8.7e-05 21.7 0.1 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.1 gi|452211115|ref|YP_007491229.1| - 6e-06 26.1 0.2 2.3e-05 24.3 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|452211115|ref|YP_007491229.1| - 1.5e-05 24.1 0.2 0.00037 19.5 0.1 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein NAD_binding_9 PF13454.1 gi|452211115|ref|YP_007491229.1| - 0.0019 17.9 0.1 0.26 11.0 0.0 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_binding_3 PF01494.14 gi|452211115|ref|YP_007491229.1| - 0.0032 16.5 0.0 0.0057 15.7 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|452211115|ref|YP_007491229.1| - 0.004 17.2 0.6 0.0093 16.0 0.5 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|452211115|ref|YP_007491229.1| - 0.03 13.4 0.8 0.28 10.2 0.4 2.1 2 0 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.22 gi|452211115|ref|YP_007491229.1| - 0.082 13.3 0.0 2.1 8.8 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DEAD PF00270.24 gi|452211117|ref|YP_007491231.1| - 4.9e-25 87.9 0.0 8.3e-25 87.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.5 gi|452211117|ref|YP_007491231.1| - 7.3e-19 68.1 0.0 2.1e-18 66.6 0.0 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.26 gi|452211117|ref|YP_007491231.1| - 2.7e-13 49.5 0.0 1.9e-12 46.8 0.0 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452211117|ref|YP_007491231.1| - 0.00075 19.3 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit LemA PF04011.7 gi|452211118|ref|YP_007491232.1| - 1.4e-66 223.2 4.0 1.5e-66 223.0 2.8 1.0 1 0 0 1 1 1 1 LemA family UPF0118 PF01594.11 gi|452211118|ref|YP_007491232.1| - 0.12 11.3 1.9 0.13 11.1 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function DUF20 P12 PF12669.2 gi|452211118|ref|YP_007491232.1| - 0.32 11.2 1.2 0.48 10.6 0.8 1.2 1 0 0 1 1 1 0 Virus attachment protein p12 family DUF2207 PF09972.4 gi|452211119|ref|YP_007491233.1| - 1.2e-140 469.4 0.8 1.6e-140 469.1 0.6 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF423 PF04241.10 gi|452211119|ref|YP_007491233.1| - 0.026 14.4 0.2 0.057 13.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF423) CRPA PF05745.6 gi|452211119|ref|YP_007491233.1| - 0.044 13.5 0.1 0.092 12.5 0.0 1.5 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) ESSS PF10183.4 gi|452211119|ref|YP_007491233.1| - 0.061 13.7 0.0 0.22 11.9 0.0 1.9 1 0 0 1 1 1 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) DUF2512 PF10710.4 gi|452211119|ref|YP_007491233.1| - 1.7 8.0 7.0 1.1 8.7 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2512) DUF2207 PF09972.4 gi|452211120|ref|YP_007491234.1| - 3.3e-94 316.3 12.7 3.5e-93 312.9 8.8 2.1 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) Ribosomal_L15e PF00827.12 gi|452211122|ref|YP_007491236.1| - 4.9e-84 280.6 7.3 5.8e-84 280.3 5.0 1.0 1 0 0 1 1 1 1 Ribosomal L15 RNA_binding PF01877.12 gi|452211123|ref|YP_007491237.1| - 1.7e-35 121.6 0.5 2e-35 121.4 0.4 1.0 1 0 0 1 1 1 1 RNA binding RPAP1_N PF08621.5 gi|452211123|ref|YP_007491237.1| - 0.049 13.2 0.2 0.093 12.3 0.1 1.5 1 0 0 1 1 1 0 RPAP1-like, N-terminal RNase_P_p30 PF01876.11 gi|452211124|ref|YP_007491238.1| - 2.6e-38 130.5 0.0 3.2e-38 130.3 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit p30 Amidohydro_4 PF13147.1 gi|452211124|ref|YP_007491238.1| - 0.011 15.7 0.0 0.032 14.2 0.0 1.7 1 1 1 2 2 2 0 Amidohydrolase NAD_binding_11 PF14833.1 gi|452211124|ref|YP_007491238.1| - 0.091 12.8 0.2 12 5.9 0.0 2.3 1 1 1 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PNTB PF02233.11 gi|452211124|ref|YP_007491238.1| - 0.16 10.7 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit RNase_P_Rpp14 PF01900.14 gi|452211125|ref|YP_007491239.1| - 6.4e-21 74.2 0.0 7.3e-21 74.0 0.0 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family Proteasome PF00227.21 gi|452211127|ref|YP_007491241.1| - 9.3e-62 207.6 0.6 1.2e-61 207.2 0.4 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|452211127|ref|YP_007491241.1| - 4.1e-15 54.7 0.4 1.2e-14 53.2 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.13 gi|452211128|ref|YP_007491242.1| - 7.9e-26 89.6 0.1 1.4e-25 88.9 0.0 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|452211128|ref|YP_007491242.1| - 8.8e-19 67.4 0.1 1.2e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain DegS PF05384.6 gi|452211128|ref|YP_007491242.1| - 0.033 13.4 0.2 1.5 7.9 0.1 2.3 1 1 1 2 2 2 0 Sensor protein DegS EFG_C PF00679.19 gi|452211128|ref|YP_007491242.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_1 PF00013.24 gi|452211129|ref|YP_007491243.1| - 6.7e-11 41.6 0.3 1.6e-10 40.4 0.2 1.7 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.1 gi|452211129|ref|YP_007491243.1| - 2.1e-08 33.3 0.0 4.8e-08 32.1 0.0 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_3 PF13014.1 gi|452211129|ref|YP_007491243.1| - 2.3e-06 27.0 0.2 5.5e-06 25.9 0.1 1.7 1 0 0 1 1 1 1 KH domain S1 PF00575.18 gi|452211129|ref|YP_007491243.1| - 4.5e-06 26.6 1.0 1.2e-05 25.3 0.0 2.2 3 0 0 3 3 3 1 S1 RNA binding domain KH_2 PF07650.12 gi|452211129|ref|YP_007491243.1| - 0.0007 19.1 0.2 0.0024 17.4 0.1 1.9 1 1 0 1 1 1 1 KH domain DUF812 PF05667.6 gi|452211129|ref|YP_007491243.1| - 0.037 12.5 0.2 0.048 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) RNase_PH PF01138.16 gi|452211130|ref|YP_007491244.1| - 1.1e-30 106.6 0.0 1.1e-30 106.6 0.0 2.7 3 0 0 3 3 3 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|452211130|ref|YP_007491244.1| - 9.7e-18 63.8 0.2 4.5e-17 61.7 0.1 2.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Exonuc_VII_L PF02601.10 gi|452211130|ref|YP_007491244.1| - 7.5 5.6 12.2 13 4.8 8.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit RNase_PH PF01138.16 gi|452211131|ref|YP_007491245.1| - 3.4e-30 105.0 0.0 5.7e-30 104.3 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|452211131|ref|YP_007491245.1| - 2.7e-13 49.6 0.6 5.3e-13 48.6 0.4 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.14 gi|452211132|ref|YP_007491246.1| - 5.4e-29 99.8 2.8 6.2e-29 99.7 1.9 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.2 gi|452211132|ref|YP_007491246.1| - 0.00033 20.3 2.2 0.00051 19.8 1.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.17 gi|452211132|ref|YP_007491246.1| - 0.0045 16.6 0.5 0.0065 16.1 0.4 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF4379 PF14311.1 gi|452211132|ref|YP_007491246.1| - 0.021 14.6 3.1 0.078 12.8 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zf-H2C2_2 PF13465.1 gi|452211132|ref|YP_007491246.1| - 0.043 14.1 0.4 6.7 7.1 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger double domain A2L_zn_ribbon PF08792.5 gi|452211132|ref|YP_007491246.1| - 0.058 12.8 1.7 0.55 9.7 0.3 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|452211132|ref|YP_007491246.1| - 0.059 12.9 0.3 0.059 12.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|452211132|ref|YP_007491246.1| - 0.08 12.6 0.4 0.08 12.6 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|452211132|ref|YP_007491246.1| - 0.086 12.8 1.7 3.1 7.8 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain UPF0547 PF10571.4 gi|452211132|ref|YP_007491246.1| - 0.12 12.1 2.0 0.31 10.7 0.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF951 PF06107.6 gi|452211132|ref|YP_007491246.1| - 0.13 11.7 1.4 0.24 10.9 1.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) TFIIS_C PF01096.13 gi|452211132|ref|YP_007491246.1| - 0.14 11.7 3.0 2.2 7.9 0.4 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-C2H2_4 PF13894.1 gi|452211132|ref|YP_007491246.1| - 0.23 11.8 1.8 1.4 9.4 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-UBP PF02148.14 gi|452211132|ref|YP_007491246.1| - 0.32 11.1 1.8 2.2 8.4 1.7 1.8 1 1 1 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein Nudix_N_2 PF14803.1 gi|452211132|ref|YP_007491246.1| - 0.33 10.6 3.1 11 5.8 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.8 gi|452211133|ref|YP_007491247.1| - 1.4e-09 37.2 8.7 2.1e-09 36.6 6.0 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.1 gi|452211133|ref|YP_007491247.1| - 3.8e-06 26.2 8.0 0.00012 21.4 1.6 1.5 1 1 1 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|452211133|ref|YP_007491247.1| - 0.00021 20.5 1.4 0.00026 20.2 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|452211133|ref|YP_007491247.1| - 0.00029 19.9 0.4 0.048 12.8 0.0 2.0 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.14 gi|452211133|ref|YP_007491247.1| - 0.00079 19.0 0.5 0.00079 19.0 0.3 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family zf-ISL3 PF14690.1 gi|452211133|ref|YP_007491247.1| - 0.0021 18.0 4.3 0.013 15.5 0.5 2.1 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cys_rich_CPXG PF14255.1 gi|452211133|ref|YP_007491247.1| - 0.003 17.3 1.9 0.016 15.0 0.1 2.0 2 0 0 2 2 2 1 Cysteine-rich CPXCG OrfB_Zn_ribbon PF07282.6 gi|452211133|ref|YP_007491247.1| - 0.0031 17.1 2.4 0.007 16.0 1.6 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain DUF951 PF06107.6 gi|452211133|ref|YP_007491247.1| - 0.0039 16.6 3.7 0.087 12.3 0.2 2.0 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF951) Zn_Tnp_IS1595 PF12760.2 gi|452211133|ref|YP_007491247.1| - 0.0081 15.9 2.2 0.24 11.2 0.1 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain Prok-RING_1 PF14446.1 gi|452211133|ref|YP_007491247.1| - 0.0095 15.6 1.9 1.1 8.9 0.0 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 CpXC PF14353.1 gi|452211133|ref|YP_007491247.1| - 0.0096 15.8 2.4 0.81 9.6 0.1 2.0 1 1 1 2 2 2 2 CpXC protein zinc_ribbon_5 PF13719.1 gi|452211133|ref|YP_007491247.1| - 0.011 15.3 3.6 0.19 11.3 2.5 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|452211133|ref|YP_007491247.1| - 0.015 15.0 4.1 0.31 10.7 2.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.2 gi|452211133|ref|YP_007491247.1| - 0.02 14.7 1.0 0.031 14.0 0.7 1.4 1 1 0 1 1 1 0 Double zinc ribbon TFIIS_C PF01096.13 gi|452211133|ref|YP_007491247.1| - 0.027 14.1 2.7 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_6 PF14599.1 gi|452211133|ref|YP_007491247.1| - 0.035 13.9 1.6 0.045 13.5 1.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon DUF329 PF03884.9 gi|452211133|ref|YP_007491247.1| - 0.042 13.3 2.2 2.4 7.7 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-RING_3 PF14369.1 gi|452211133|ref|YP_007491247.1| - 0.045 13.7 0.8 0.063 13.2 0.5 1.3 1 0 0 1 1 1 0 zinc-finger zf-AN1 PF01428.11 gi|452211133|ref|YP_007491247.1| - 0.046 13.5 1.5 0.12 12.2 1.1 1.6 1 1 1 2 2 2 0 AN1-like Zinc finger zf-Di19 PF05605.7 gi|452211133|ref|YP_007491247.1| - 0.065 13.3 0.3 0.52 10.4 0.0 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding C1_1 PF00130.17 gi|452211133|ref|YP_007491247.1| - 0.067 12.9 1.6 0.1 12.3 1.1 1.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_4 PF13894.1 gi|452211133|ref|YP_007491247.1| - 0.075 13.4 1.1 2.4 8.6 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DUF2072 PF09845.4 gi|452211133|ref|YP_007491247.1| - 0.076 12.9 1.0 0.073 13.0 0.7 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) FANCL_C PF11793.3 gi|452211133|ref|YP_007491247.1| - 0.081 12.9 1.7 0.62 10.0 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Ogr_Delta PF04606.7 gi|452211133|ref|YP_007491247.1| - 0.089 12.4 1.6 0.79 9.4 0.1 2.0 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DUF2197 PF09963.4 gi|452211133|ref|YP_007491247.1| - 0.19 11.7 2.4 2.6 8.0 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Cys_rich_KTR PF14205.1 gi|452211133|ref|YP_007491247.1| - 0.2 11.1 5.1 0.76 9.2 0.3 2.1 1 1 1 2 2 2 0 Cysteine-rich KTR DiS_P_DiS PF06750.8 gi|452211133|ref|YP_007491247.1| - 0.21 11.4 2.7 5.9 6.7 0.2 2.0 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain zf-LITAF-like PF10601.4 gi|452211133|ref|YP_007491247.1| - 0.21 11.4 2.3 4.4 7.2 0.1 2.1 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain DUF2752 PF10825.3 gi|452211133|ref|YP_007491247.1| - 0.23 11.5 0.1 0.23 11.5 0.1 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF2752) A2L_zn_ribbon PF08792.5 gi|452211133|ref|YP_007491247.1| - 0.24 10.9 1.9 5 6.7 0.0 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain Ribosomal_S27e PF01667.12 gi|452211133|ref|YP_007491247.1| - 0.25 10.9 1.7 1.1 8.8 0.0 1.8 1 1 0 1 1 1 0 Ribosomal protein S27 zf-TFIIB PF13453.1 gi|452211133|ref|YP_007491247.1| - 0.36 10.0 2.3 0.72 9.0 1.6 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger Cript PF10235.4 gi|452211133|ref|YP_007491247.1| - 0.42 11.0 2.5 0.71 10.2 1.8 1.5 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT zf-FCS PF06467.9 gi|452211133|ref|YP_007491247.1| - 0.66 9.6 4.6 0.71 9.5 0.1 2.1 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Desulfoferrod_N PF06397.7 gi|452211133|ref|YP_007491247.1| - 1 8.7 4.5 2.4 7.5 0.4 2.1 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain Mu-like_Com PF10122.4 gi|452211133|ref|YP_007491247.1| - 1.1 8.3 6.3 2.2 7.4 0.1 2.2 1 1 1 2 2 2 0 Mu-like prophage protein Com DUF2296 PF10058.4 gi|452211133|ref|YP_007491247.1| - 1.1 9.0 4.6 25 4.7 3.0 2.1 1 1 1 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Zn-ribbon_8 PF09723.5 gi|452211133|ref|YP_007491247.1| - 1.2 9.0 7.7 8.1 6.4 5.4 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-FPG_IleRS PF06827.9 gi|452211133|ref|YP_007491247.1| - 2.1 8.0 7.4 2.9 7.6 0.3 2.4 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-C2H2 PF00096.21 gi|452211133|ref|YP_007491247.1| - 2.1 8.8 4.4 9.2 6.8 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_ribbon_recom PF13408.1 gi|452211133|ref|YP_007491247.1| - 4 7.7 6.5 1.2 9.4 0.4 2.1 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain UPF0547 PF10571.4 gi|452211133|ref|YP_007491247.1| - 9.2 6.0 9.3 16 5.2 5.4 2.1 2 1 0 2 2 1 0 Uncharacterised protein family UPF0547 Brix PF04427.13 gi|452211135|ref|YP_007491249.1| - 2.2e-06 27.4 0.0 4.3e-06 26.5 0.0 1.6 1 1 0 1 1 1 1 Brix domain Pcc1 PF09341.5 gi|452211136|ref|YP_007491250.1| - 4.2e-19 68.3 0.5 4.7e-19 68.1 0.4 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4468 PF14730.1 gi|452211136|ref|YP_007491250.1| - 0.065 12.9 0.0 0.074 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold IRS PF02174.12 gi|452211136|ref|YP_007491250.1| - 0.084 12.4 0.2 0.22 11.1 0.0 1.7 1 1 1 2 2 2 0 PTB domain (IRS-1 type) CHASE4 PF05228.8 gi|452211137|ref|YP_007491251.1| - 4.3e-40 136.9 0.0 2.1e-38 131.4 0.0 2.5 2 1 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.21 gi|452211137|ref|YP_007491251.1| - 3.6e-28 97.5 0.0 6.8e-28 96.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452211137|ref|YP_007491251.1| - 1.9e-20 72.6 0.0 4.3e-20 71.4 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|452211137|ref|YP_007491251.1| - 2.5e-13 49.9 0.0 1.5e-12 47.5 0.0 2.2 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|452211137|ref|YP_007491251.1| - 3.3e-10 40.2 0.0 9.8e-10 38.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|452211137|ref|YP_007491251.1| - 3.1e-05 23.7 0.0 0.00011 21.9 0.0 2.0 1 1 0 1 1 1 1 PAS fold PAS_10 PF13596.1 gi|452211137|ref|YP_007491251.1| - 0.00088 19.5 0.0 0.0045 17.2 0.0 2.3 1 1 0 1 1 1 1 PAS domain HAMP PF00672.20 gi|452211137|ref|YP_007491251.1| - 0.0024 17.9 0.0 0.0048 17.0 0.0 1.5 1 0 0 1 1 1 1 HAMP domain PAS_8 PF13188.1 gi|452211137|ref|YP_007491251.1| - 0.0091 15.8 0.0 0.045 13.6 0.0 2.3 1 0 0 1 1 1 1 PAS domain CBS PF00571.23 gi|452211137|ref|YP_007491251.1| - 0.098 12.4 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 CBS domain TerB-N PF13208.1 gi|452211137|ref|YP_007491251.1| - 0.15 11.4 0.1 0.32 10.4 0.1 1.4 1 0 0 1 1 1 0 TerB-N NosD PF05048.8 gi|452211138|ref|YP_007491252.1| - 2e-51 174.4 39.7 2e-51 174.4 27.5 4.8 2 2 3 5 5 5 2 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452211138|ref|YP_007491252.1| - 2.2e-21 75.3 15.7 8.7e-15 54.2 1.4 2.6 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|452211138|ref|YP_007491252.1| - 1.1e-12 47.9 68.2 1.1e-07 31.7 18.0 5.8 3 3 1 4 4 4 2 Right handed beta helix region Kelch_4 PF13418.1 gi|452211138|ref|YP_007491252.1| - 0.0002 21.0 4.2 8.5 6.2 0.1 6.2 6 0 0 6 6 6 2 Galactose oxidase, central domain BssC_TutF PF08201.6 gi|452211139|ref|YP_007491253.1| - 0.054 12.9 1.5 0.092 12.2 1.1 1.6 1 1 0 1 1 1 0 BssC/TutF protein Prok-JAB PF14464.1 gi|452211140|ref|YP_007491254.1| - 1.6e-11 43.7 0.0 1.9e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 gi|452211140|ref|YP_007491254.1| - 0.0021 17.8 0.0 0.004 16.8 0.0 1.5 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease RadC PF04002.10 gi|452211140|ref|YP_007491254.1| - 0.076 12.7 0.0 0.098 12.3 0.0 1.3 1 0 0 1 1 1 0 RadC-like JAB domain Toxin-JAB1 PF15659.1 gi|452211140|ref|YP_007491254.1| - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 JAB-like toxin 1 Malic_M PF03949.10 gi|452211141|ref|YP_007491255.1| - 1e-67 228.3 2.5 1.4e-67 227.9 1.7 1.2 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.14 gi|452211141|ref|YP_007491255.1| - 5.3e-31 107.6 0.2 1.5e-28 99.6 0.1 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain ELFV_dehydrog PF00208.16 gi|452211141|ref|YP_007491255.1| - 1.5e-05 24.6 0.8 0.00023 20.8 0.1 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.16 gi|452211141|ref|YP_007491255.1| - 1.1 9.0 3.6 0.79 9.5 0.7 2.2 2 1 0 2 2 2 0 ThiF family Desulfoferrod_N PF06397.7 gi|452211142|ref|YP_007491256.1| - 0.0093 15.3 13.7 0.25 10.7 9.5 2.2 1 1 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain PhnA_Zn_Ribbon PF08274.7 gi|452211142|ref|YP_007491256.1| - 0.04 13.7 0.3 0.04 13.7 0.2 2.1 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Zn_Tnp_IS91 PF14319.1 gi|452211142|ref|YP_007491256.1| - 0.044 13.2 6.3 0.048 13.1 4.4 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-NADH-PPase PF09297.6 gi|452211142|ref|YP_007491256.1| - 0.28 10.7 3.8 2.7 7.5 0.0 2.7 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain IMD PF08397.6 gi|452211143|ref|YP_007491257.1| - 0.034 13.4 1.1 0.04 13.2 0.7 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain FUSC-like PF12805.2 gi|452211143|ref|YP_007491257.1| - 0.051 12.5 0.3 0.06 12.2 0.2 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS PYRIN PF02758.11 gi|452211143|ref|YP_007491257.1| - 0.083 12.5 0.5 0.21 11.3 0.1 1.8 1 1 1 2 2 2 0 PAAD/DAPIN/Pyrin domain Mastoparan PF08249.6 gi|452211143|ref|YP_007491257.1| - 0.14 12.7 0.3 0.23 12.0 0.2 1.4 1 0 0 1 1 1 0 Mastoparan protein Snapin_Pallidin PF14712.1 gi|452211143|ref|YP_007491257.1| - 0.3 11.4 2.8 2.5 8.4 0.6 2.0 1 1 1 2 2 2 0 Snapin/Pallidin XhlA PF10779.4 gi|452211143|ref|YP_007491257.1| - 0.58 10.1 5.8 0.97 9.3 4.0 1.4 1 0 0 1 1 1 0 Haemolysin XhlA TPP_enzyme_C PF02775.16 gi|452211144|ref|YP_007491258.1| - 4.6e-26 91.2 0.2 8.3e-26 90.3 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|452211144|ref|YP_007491258.1| - 1.1e-17 64.3 0.0 1.8e-17 63.6 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|452211144|ref|YP_007491258.1| - 8.7e-11 40.9 16.0 3.3e-07 29.6 2.1 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211144|ref|YP_007491258.1| - 4e-08 32.7 11.9 0.00016 21.4 1.4 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211144|ref|YP_007491258.1| - 4.5e-08 32.7 7.6 1.3e-07 31.2 5.3 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211144|ref|YP_007491258.1| - 5.8e-07 29.2 13.7 1.6e-05 24.6 8.3 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211144|ref|YP_007491258.1| - 7.4e-07 28.7 17.5 7e-05 22.5 1.1 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452211144|ref|YP_007491258.1| - 1.6e-05 25.0 8.2 1.6e-05 25.0 5.7 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211144|ref|YP_007491258.1| - 3.1e-05 24.2 10.7 3.1e-05 24.2 7.4 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain TPP_enzyme_N PF02776.13 gi|452211144|ref|YP_007491258.1| - 5e-05 22.8 1.3 0.0012 18.3 0.2 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_8 PF13183.1 gi|452211144|ref|YP_007491258.1| - 0.001 19.0 10.7 0.004 17.1 7.1 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211144|ref|YP_007491258.1| - 0.0029 18.3 8.8 0.0077 16.9 1.4 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|452211144|ref|YP_007491258.1| - 0.013 16.0 13.0 0.37 11.3 0.9 3.2 2 1 1 3 3 2 0 4Fe-4S single cluster domain Transket_pyr PF02779.19 gi|452211144|ref|YP_007491258.1| - 0.024 14.1 0.2 0.082 12.3 0.1 2.0 2 1 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_4 PF12800.2 gi|452211144|ref|YP_007491258.1| - 0.028 14.7 18.6 0.055 13.8 2.9 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|452211144|ref|YP_007491258.1| - 0.045 14.1 11.3 1.3 9.4 0.7 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain AAA_19 PF13245.1 gi|452211144|ref|YP_007491258.1| - 0.051 13.3 0.4 0.45 10.2 0.2 2.3 2 0 0 2 2 2 0 Part of AAA domain Fer4_18 PF13746.1 gi|452211144|ref|YP_007491258.1| - 0.11 12.9 10.6 0.16 12.4 1.3 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452211144|ref|YP_007491258.1| - 0.2 11.5 4.0 0.83 9.5 2.8 2.1 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_3 PF12798.2 gi|452211144|ref|YP_007491258.1| - 0.36 11.5 23.3 0.064 13.8 4.5 3.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452211144|ref|YP_007491258.1| - 0.74 10.2 16.5 0.073 13.4 1.3 2.9 2 1 3 5 5 4 0 4Fe-4S dicluster domain POR PF01558.13 gi|452211145|ref|YP_007491259.1| - 1.8e-40 138.6 0.0 2.3e-40 138.3 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding_C_2 PF14535.1 gi|452211146|ref|YP_007491260.1| - 4.7e-25 87.4 0.2 2.5e-24 85.1 0.0 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|452211146|ref|YP_007491260.1| - 2.9e-14 52.2 0.0 4.3e-14 51.7 0.0 1.3 1 1 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.8 gi|452211146|ref|YP_007491260.1| - 0.012 14.1 0.0 0.11 10.9 0.0 2.2 3 0 0 3 3 3 0 GH3 auxin-responsive promoter MS_channel PF00924.13 gi|452211147|ref|YP_007491261.1| - 2.8e-43 147.6 0.5 3.9e-43 147.2 0.3 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel VirE1 PF12189.3 gi|452211147|ref|YP_007491261.1| - 0.12 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Single-strand DNA-binding protein RhodobacterPufX PF11511.3 gi|452211147|ref|YP_007491261.1| - 0.17 11.2 4.3 2.7 7.4 0.2 2.6 1 1 1 2 2 2 0 Intrinsic membrane protein PufX MerC PF03203.9 gi|452211147|ref|YP_007491261.1| - 1.5 9.2 7.3 20 5.5 3.0 2.2 1 1 1 2 2 2 0 MerC mercury resistance protein Fasciclin PF02469.17 gi|452211148|ref|YP_007491262.1| - 3e-63 211.5 5.3 5.1e-33 113.7 0.0 3.2 3 0 0 3 3 3 2 Fasciclin domain DUF4430 PF14478.1 gi|452211148|ref|YP_007491262.1| - 1.6e-23 82.5 15.4 4.8e-08 32.9 0.2 4.0 3 1 0 3 3 3 3 Domain of unknown function (DUF4430) TM_helix PF05552.7 gi|452211150|ref|YP_007491264.1| - 2.4e-30 103.9 38.2 4.1e-12 45.5 1.0 5.1 5 0 0 5 5 5 4 Conserved TM helix DUF3148 PF11347.3 gi|452211151|ref|YP_007491265.1| - 0.11 12.1 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3148) CorA PF01544.13 gi|452211152|ref|YP_007491266.1| - 2.1e-80 269.9 4.6 2.5e-80 269.6 3.2 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein T2SF PF00482.18 gi|452211152|ref|YP_007491266.1| - 0.015 15.2 2.8 0.018 14.9 0.1 2.3 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F DUF432 PF04254.8 gi|452211153|ref|YP_007491267.1| - 2.9e-42 143.4 0.0 4.3e-42 142.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.13 gi|452211154|ref|YP_007491268.1| - 2.3e-55 187.1 0.7 2.3e-55 187.1 0.5 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel ThiS PF02597.15 gi|452211156|ref|YP_007491270.1| - 8.6e-22 77.3 0.0 9.9e-22 77.1 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.6 gi|452211156|ref|YP_007491270.1| - 0.016 15.3 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) AFOR_C PF01314.13 gi|452211157|ref|YP_007491271.1| - 3.1e-145 483.6 0.0 3.5e-145 483.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 PocR PF10114.4 gi|452211158|ref|YP_007491272.1| - 1e-62 210.3 0.4 3.4e-62 208.6 0.0 2.0 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|452211158|ref|YP_007491272.1| - 1.7e-40 137.6 1.1 1.8e-18 66.8 0.0 4.5 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|452211158|ref|YP_007491272.1| - 2e-30 104.8 0.0 9.5e-14 51.1 0.0 3.7 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.7 gi|452211158|ref|YP_007491272.1| - 3e-30 103.8 2.1 5.6e-30 103.0 0.5 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|452211158|ref|YP_007491272.1| - 4.2e-29 100.4 1.1 2.3e-13 50.0 0.1 4.2 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|452211158|ref|YP_007491272.1| - 9.7e-27 93.1 0.0 1.9e-09 37.4 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|452211158|ref|YP_007491272.1| - 7.8e-15 54.1 0.0 8.2e-07 28.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|452211158|ref|YP_007491272.1| - 2.6e-11 43.1 0.3 1.2e-10 41.0 0.2 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|452211158|ref|YP_007491272.1| - 2.9e-06 27.5 0.0 0.00063 19.9 0.0 3.0 2 0 0 2 2 2 1 PAS domain PAS_7 PF12860.2 gi|452211158|ref|YP_007491272.1| - 7.7e-05 22.6 0.3 0.048 13.6 0.0 4.0 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.1 gi|452211158|ref|YP_007491272.1| - 0.00017 21.3 0.0 0.00036 20.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_11 PF14598.1 gi|452211158|ref|YP_007491272.1| - 0.0013 18.6 0.1 0.21 11.5 0.0 3.1 2 1 0 2 2 2 1 PAS domain HWE_HK PF07536.9 gi|452211158|ref|YP_007491272.1| - 0.0019 18.6 0.4 0.0066 16.8 0.0 2.1 2 0 0 2 2 2 1 HWE histidine kinase OEP PF02321.13 gi|452211158|ref|YP_007491272.1| - 0.51 9.9 7.0 0.13 11.8 1.6 2.4 3 0 0 3 3 3 0 Outer membrane efflux protein MULE PF10551.4 gi|452211159|ref|YP_007491273.1| - 4.4e-12 45.9 0.1 8.7e-12 45.0 0.0 1.5 2 0 0 2 2 2 1 MULE transposase domain DUF1250 PF06855.7 gi|452211159|ref|YP_007491273.1| - 0.0019 17.6 0.3 0.068 12.7 0.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1250) DDE_Tnp_IS240 PF13610.1 gi|452211159|ref|YP_007491273.1| - 0.0027 17.6 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 DDE domain DUF468 PF04318.7 gi|452211159|ref|YP_007491273.1| - 0.011 16.3 1.2 1.1 9.8 0.1 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF468) ApbE PF02424.10 gi|452211160|ref|YP_007491274.1| - 4.2e-23 81.9 5.3 6.6e-22 78.0 3.7 2.0 1 1 0 1 1 1 1 ApbE family XdhC_CoxI PF02625.11 gi|452211160|ref|YP_007491274.1| - 1.5 8.4 4.0 6.5 6.4 0.2 2.6 3 0 0 3 3 3 0 XdhC and CoxI family Aminotran_1_2 PF00155.16 gi|452211161|ref|YP_007491275.1| - 3.3e-58 197.3 0.0 3.8e-58 197.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|452211161|ref|YP_007491275.1| - 0.00047 18.5 0.0 0.00065 18.0 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Abhydrolase_6 PF12697.2 gi|452211162|ref|YP_007491276.1| - 5.6e-42 144.1 0.2 6.4e-42 143.9 0.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|452211162|ref|YP_007491276.1| - 7e-20 71.5 0.0 1.4e-18 67.3 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|452211162|ref|YP_007491276.1| - 9.8e-20 70.7 0.0 1e-18 67.4 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.5 gi|452211162|ref|YP_007491276.1| - 1e-05 25.3 0.0 1.7e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein SCFA_trans PF02667.9 gi|452211162|ref|YP_007491276.1| - 0.03 13.1 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Short chain fatty acid transporter Hydrolase_4 PF12146.3 gi|452211162|ref|YP_007491276.1| - 0.046 13.5 0.0 0.098 12.5 0.0 1.6 1 0 0 1 1 1 0 Putative lysophospholipase Transposase_28 PF04195.7 gi|452211162|ref|YP_007491276.1| - 0.084 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative gypsy type transposon FSH1 PF03959.8 gi|452211162|ref|YP_007491276.1| - 0.17 11.3 0.0 3.2 7.1 0.0 2.3 2 1 0 3 3 3 0 Serine hydrolase (FSH1) DUF4605 PF15378.1 gi|452211163|ref|YP_007491277.1| - 0.056 13.1 0.5 0.062 12.9 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4605) DUF2124 PF09897.4 gi|452211164|ref|YP_007491278.1| - 1.6e-52 177.1 0.1 1.8e-52 176.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) MCH PF02289.11 gi|452211165|ref|YP_007491279.1| - 6e-158 524.8 0.6 6.7e-158 524.6 0.4 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Peptidase_U32 PF01136.14 gi|452211166|ref|YP_007491280.1| - 1.2e-80 269.8 0.1 1.6e-80 269.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.20 gi|452211166|ref|YP_007491280.1| - 0.011 15.7 0.2 0.22 11.6 0.1 2.5 1 1 1 2 2 2 0 Elongation factor Tu domain 2 Acyl_transf_3 PF01757.17 gi|452211167|ref|YP_007491281.1| - 7.7e-16 57.8 47.8 1.4e-15 57.0 33.1 1.4 1 1 0 1 1 1 1 Acyltransferase family OpgC_C PF10129.4 gi|452211167|ref|YP_007491281.1| - 0.00012 20.8 31.9 0.00036 19.3 22.1 1.8 1 1 0 1 1 1 1 OpgC protein FKBP_C PF00254.23 gi|452211168|ref|YP_007491282.1| - 2.4e-15 56.2 0.2 4.3e-13 49.0 0.0 2.3 2 0 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase NikR_C PF08753.6 gi|452211169|ref|YP_007491283.1| - 1.2e-30 105.1 0.9 1.7e-30 104.7 0.6 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|452211169|ref|YP_007491283.1| - 0.00017 21.3 0.0 0.00033 20.4 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family Bromo_TP PF07524.8 gi|452211169|ref|YP_007491283.1| - 0.14 11.9 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Bromodomain associated Acetyltransf_1 PF00583.19 gi|452211170|ref|YP_007491284.1| - 4e-14 52.4 0.0 6.1e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.5 gi|452211170|ref|YP_007491284.1| - 1.1e-10 41.1 0.0 1.7e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.1 gi|452211170|ref|YP_007491284.1| - 6.6e-08 32.5 1.6 7.5e-08 32.4 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452211170|ref|YP_007491284.1| - 9.6e-08 32.0 0.0 1.1e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452211170|ref|YP_007491284.1| - 2.2e-07 31.0 0.0 2.7e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452211170|ref|YP_007491284.1| - 3.8e-07 30.1 0.1 4.5e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452211170|ref|YP_007491284.1| - 3e-05 23.8 0.0 7.3e-05 22.6 0.0 1.6 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452211170|ref|YP_007491284.1| - 0.00023 21.3 0.0 0.00026 21.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452211170|ref|YP_007491284.1| - 0.0051 16.6 0.0 0.0071 16.2 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF3749 PF12568.3 gi|452211170|ref|YP_007491284.1| - 0.057 13.0 0.0 0.081 12.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452211171|ref|YP_007491285.1| - 3.3e-17 62.3 0.0 4.5e-17 61.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452211171|ref|YP_007491285.1| - 2.9e-13 49.7 0.3 4.8e-13 49.0 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|452211171|ref|YP_007491285.1| - 7.5e-12 45.4 0.6 9.1e-12 45.1 0.4 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452211171|ref|YP_007491285.1| - 4.2e-11 42.4 0.0 6.3e-11 41.8 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|452211171|ref|YP_007491285.1| - 2.2e-09 37.2 0.0 3e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452211171|ref|YP_007491285.1| - 4.7e-09 36.3 0.0 6.4e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452211171|ref|YP_007491285.1| - 7.2e-09 35.6 0.0 1e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|452211171|ref|YP_007491285.1| - 3.5e-07 30.4 0.0 4.2e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452211171|ref|YP_007491285.1| - 0.0025 17.6 0.0 0.0052 16.6 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF3804 PF12707.2 gi|452211171|ref|YP_007491285.1| - 0.016 14.7 0.1 0.023 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) THF_DHG_CYH PF00763.18 gi|452211171|ref|YP_007491285.1| - 0.1 12.6 0.4 0.5 10.4 0.0 2.1 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Na_Ca_ex PF01699.19 gi|452211172|ref|YP_007491286.1| - 2.6e-51 172.8 37.1 1.2e-26 92.9 9.9 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein ACT_7 PF13840.1 gi|452211173|ref|YP_007491287.1| - 1.5e-25 88.5 0.0 2.1e-25 88.0 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|452211173|ref|YP_007491287.1| - 0.00017 21.0 0.1 0.00032 20.1 0.0 1.5 1 0 0 1 1 1 1 ACT domain Na_Ala_symp PF01235.12 gi|452211174|ref|YP_007491288.1| - 2.5e-136 454.5 21.8 2.8e-136 454.3 15.1 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family CARDB PF07705.6 gi|452211175|ref|YP_007491289.1| - 5.2e-16 58.5 0.0 7.7e-05 22.6 0.0 3.6 2 1 2 4 4 4 3 CARDB DUF11 PF01345.13 gi|452211175|ref|YP_007491289.1| - 0.00028 20.8 0.0 1.7 8.7 0.0 3.4 3 0 0 3 3 3 2 Domain of unknown function DUF11 DUF2393 PF09624.5 gi|452211175|ref|YP_007491289.1| - 0.00044 19.8 0.1 0.45 10.0 0.0 3.3 3 1 0 3 3 3 2 Protein of unknown function (DUF2393) Gryzun PF07919.7 gi|452211175|ref|YP_007491289.1| - 0.00067 18.0 0.0 0.59 8.3 0.0 2.1 1 1 1 2 2 2 2 Gryzun, putative trafficking through Golgi TRAP_beta PF05753.9 gi|452211175|ref|YP_007491289.1| - 0.001 18.2 0.0 1.2 8.2 0.0 3.3 3 0 0 3 3 3 2 Translocon-associated protein beta (TRAPB) NPCBM_assoc PF10633.4 gi|452211175|ref|YP_007491289.1| - 0.011 15.7 0.0 4 7.5 0.0 3.5 5 0 0 5 5 5 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4352 PF11611.3 gi|452211175|ref|YP_007491289.1| - 0.017 15.2 0.1 0.11 12.6 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4352) MacB_PCD PF12704.2 gi|452211176|ref|YP_007491290.1| - 2.8e-16 59.8 1.6 2.8e-16 59.8 1.1 2.0 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452211176|ref|YP_007491290.1| - 8.5e-12 44.9 8.5 8.5e-12 44.9 5.9 2.1 2 0 0 2 2 2 1 FtsX-like permease family ABC_tran PF00005.22 gi|452211177|ref|YP_007491291.1| - 9e-33 113.4 0.1 1.9e-32 112.4 0.0 1.6 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|452211177|ref|YP_007491291.1| - 3.5e-11 43.6 0.0 7.3e-09 35.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|452211177|ref|YP_007491291.1| - 2.9e-08 34.0 0.3 0.00036 20.8 0.0 2.8 3 0 0 3 3 3 2 AAA domain SMC_N PF02463.14 gi|452211177|ref|YP_007491291.1| - 1.3e-07 31.0 0.2 7.6e-07 28.5 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|452211177|ref|YP_007491291.1| - 9.1e-06 25.8 0.4 8.8e-05 22.6 0.3 2.3 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|452211177|ref|YP_007491291.1| - 1.1e-05 24.7 0.1 0.12 11.3 0.0 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|452211177|ref|YP_007491291.1| - 9.8e-05 21.8 0.1 0.00036 20.0 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452211177|ref|YP_007491291.1| - 0.00014 21.3 0.1 0.0043 16.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|452211177|ref|YP_007491291.1| - 0.00016 21.6 0.1 0.00035 20.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|452211177|ref|YP_007491291.1| - 0.00028 21.6 0.2 0.0008 20.2 0.1 2.2 2 1 0 2 2 1 1 AAA domain DUF258 PF03193.11 gi|452211177|ref|YP_007491291.1| - 0.00058 19.0 0.1 0.0012 18.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_28 PF13521.1 gi|452211177|ref|YP_007491291.1| - 0.0007 19.5 0.0 0.0018 18.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|452211177|ref|YP_007491291.1| - 0.00074 19.0 0.0 0.017 14.5 0.0 2.3 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain SbcCD_C PF13558.1 gi|452211177|ref|YP_007491291.1| - 0.0016 18.3 0.2 0.012 15.4 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|452211177|ref|YP_007491291.1| - 0.0016 18.2 0.1 0.0063 16.4 0.0 1.9 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|452211177|ref|YP_007491291.1| - 0.0021 17.4 0.1 0.025 13.9 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein cobW PF02492.14 gi|452211177|ref|YP_007491291.1| - 0.0026 17.2 0.0 0.0061 16.0 0.0 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.2 gi|452211177|ref|YP_007491291.1| - 0.0028 17.1 0.1 0.016 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|452211177|ref|YP_007491291.1| - 0.0037 17.1 0.1 0.011 15.6 0.0 1.9 2 1 0 2 2 1 1 AAA domain AAA_24 PF13479.1 gi|452211177|ref|YP_007491291.1| - 0.0057 16.2 0.6 0.047 13.2 0.0 2.6 3 0 0 3 3 3 1 AAA domain MobB PF03205.9 gi|452211177|ref|YP_007491291.1| - 0.008 15.8 0.1 0.075 12.7 0.0 2.4 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|452211177|ref|YP_007491291.1| - 0.0082 15.2 0.5 0.82 8.7 0.0 3.0 2 1 1 3 3 3 1 KaiC T2SE PF00437.15 gi|452211177|ref|YP_007491291.1| - 0.009 14.9 0.3 0.03 13.2 0.1 1.8 1 1 1 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.1 gi|452211177|ref|YP_007491291.1| - 0.0093 16.3 0.1 0.0093 16.3 0.1 1.8 2 1 0 2 2 1 1 AAA domain Arch_ATPase PF01637.13 gi|452211177|ref|YP_007491291.1| - 0.011 15.4 0.1 0.023 14.3 0.0 1.8 2 1 0 2 2 2 0 Archaeal ATPase MMR_HSR1 PF01926.18 gi|452211177|ref|YP_007491291.1| - 0.015 15.2 0.1 0.041 13.8 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRPRB PF09439.5 gi|452211177|ref|YP_007491291.1| - 0.016 14.4 0.0 0.031 13.4 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit NACHT PF05729.7 gi|452211177|ref|YP_007491291.1| - 0.016 14.8 0.2 0.041 13.5 0.1 1.8 1 1 0 1 1 1 0 NACHT domain Miro PF08477.8 gi|452211177|ref|YP_007491291.1| - 0.034 14.6 0.4 0.12 12.8 0.0 2.1 2 0 0 2 2 2 0 Miro-like protein AAA_30 PF13604.1 gi|452211177|ref|YP_007491291.1| - 0.039 13.5 0.3 0.13 11.8 0.0 1.9 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|452211177|ref|YP_007491291.1| - 0.072 11.9 0.1 0.17 10.7 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain ATP-synt_ab PF00006.20 gi|452211177|ref|YP_007491291.1| - 0.074 12.5 1.3 0.33 10.4 0.0 2.3 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain G-alpha PF00503.15 gi|452211177|ref|YP_007491291.1| - 0.095 11.3 0.0 0.11 11.2 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA PF00004.24 gi|452211177|ref|YP_007491291.1| - 0.84 9.8 6.4 18 5.5 2.5 3.4 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) PepSY_2 PF13670.1 gi|452211179|ref|YP_007491293.1| - 0.16 11.8 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain AAA_3 PF07726.6 gi|452211180|ref|YP_007491294.1| - 1.1e-63 212.6 0.2 1.7e-63 212.0 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|452211180|ref|YP_007491294.1| - 2e-10 40.5 0.0 3.7e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|452211180|ref|YP_007491294.1| - 6.1e-09 35.1 0.4 5.3e-08 32.0 0.3 2.1 1 1 0 1 1 1 1 MCM2/3/5 family AAA PF00004.24 gi|452211180|ref|YP_007491294.1| - 1.7e-06 28.2 0.0 4.2e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|452211180|ref|YP_007491294.1| - 4.3e-06 25.9 0.7 8.6e-05 21.6 0.5 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Mg_chelatase PF01078.16 gi|452211180|ref|YP_007491294.1| - 9e-05 21.7 0.3 0.0072 15.5 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|452211180|ref|YP_007491294.1| - 0.00044 19.7 0.1 0.0091 15.4 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.9 gi|452211180|ref|YP_007491294.1| - 0.073 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF58 PF01882.13 gi|452211181|ref|YP_007491295.1| - 7.9e-20 70.7 0.0 1.3e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_CoxE PF05762.9 gi|452211181|ref|YP_007491295.1| - 4.4e-06 25.9 0.0 7e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.1 gi|452211181|ref|YP_007491295.1| - 5.9e-05 23.2 0.0 8.4e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_22 PF13401.1 gi|452211181|ref|YP_007491295.1| - 0.12 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain BatA PF07584.6 gi|452211182|ref|YP_007491296.1| - 7e-13 48.5 2.9 7e-13 48.5 2.0 2.0 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_2 PF13519.1 gi|452211182|ref|YP_007491296.1| - 0.052 13.6 0.6 0.54 10.3 0.4 2.6 1 1 0 1 1 1 0 von Willebrand factor type A domain VWA_2 PF13519.1 gi|452211183|ref|YP_007491297.1| - 1.5e-12 47.9 0.1 8.4e-10 39.0 0.0 2.6 2 0 0 2 2 2 2 von Willebrand factor type A domain DUF1355 PF07090.6 gi|452211183|ref|YP_007491297.1| - 6.2e-09 35.4 0.0 1.3e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1355) VWA PF00092.23 gi|452211183|ref|YP_007491297.1| - 1.4e-05 24.8 0.3 0.0017 18.0 0.1 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain ThuA PF06283.6 gi|452211183|ref|YP_007491297.1| - 0.014 15.1 0.0 0.08 12.6 0.0 2.2 2 1 0 2 2 2 0 Trehalose utilisation DUF1109 PF06532.6 gi|452211183|ref|YP_007491297.1| - 0.062 12.7 0.1 0.11 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1109) DUF1194 PF06707.6 gi|452211183|ref|YP_007491297.1| - 0.12 11.3 0.1 0.85 8.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1194) UPF0118 PF01594.11 gi|452211185|ref|YP_007491299.1| - 3.8e-46 157.5 40.2 4.5e-46 157.3 27.8 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 DUF4177 PF13783.1 gi|452211186|ref|YP_007491300.1| - 4.1e-05 23.1 0.0 5.1e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4177) DUF3055 PF11256.3 gi|452211186|ref|YP_007491300.1| - 0.14 12.2 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3055) Serpin PF00079.15 gi|452211188|ref|YP_007491302.1| - 4e-114 381.5 2.7 4.5e-114 381.4 1.9 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) DUF2286 PF10051.4 gi|452211189|ref|YP_007491303.1| - 0.022 14.3 0.0 4.9 6.7 0.0 3.6 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2286) DUF3469 PF11952.3 gi|452211189|ref|YP_007491303.1| - 0.034 13.8 3.9 2.7 7.7 0.1 4.0 4 1 0 4 4 4 0 Protein of unknown function (DUF3469) DnaB_bind PF10410.4 gi|452211189|ref|YP_007491303.1| - 3.1 7.8 5.9 16 5.5 0.2 3.6 3 0 0 3 3 3 0 DnaB-helicase binding domain of primase CsbD PF05532.7 gi|452211190|ref|YP_007491304.1| - 1.6e-15 56.5 13.2 1.9e-15 56.2 9.1 1.1 1 0 0 1 1 1 1 CsbD-like ISG65-75 PF11727.3 gi|452211190|ref|YP_007491304.1| - 0.4 9.6 7.7 0.4 9.6 5.3 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein HTH_7 PF02796.10 gi|452211191|ref|YP_007491305.1| - 5.3e-08 32.5 0.9 1e-06 28.4 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase rve PF00665.21 gi|452211191|ref|YP_007491305.1| - 3.3e-07 30.4 0.0 6.9e-07 29.4 0.0 1.5 2 0 0 2 2 1 1 Integrase core domain HTH_38 PF13936.1 gi|452211191|ref|YP_007491305.1| - 9.3e-07 28.3 0.0 2.3e-06 27.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|452211191|ref|YP_007491305.1| - 2e-05 24.0 0.0 4.3e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.5 gi|452211191|ref|YP_007491305.1| - 0.0012 18.4 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Terminase_5 PF06056.7 gi|452211191|ref|YP_007491305.1| - 0.0035 16.8 0.0 0.0066 15.9 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_3 PF01381.17 gi|452211191|ref|YP_007491305.1| - 0.015 15.1 0.1 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix MerR_1 PF13411.1 gi|452211191|ref|YP_007491305.1| - 0.02 14.6 0.1 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 MerR HTH family regulatory protein MerR PF00376.18 gi|452211191|ref|YP_007491305.1| - 0.022 14.2 0.2 0.041 13.4 0.2 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Sigma70_r4_2 PF08281.7 gi|452211191|ref|YP_007491305.1| - 0.023 14.1 0.0 0.047 13.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_5 PF01022.15 gi|452211191|ref|YP_007491305.1| - 0.024 14.3 0.0 2.2 8.0 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_29 PF13551.1 gi|452211191|ref|YP_007491305.1| - 0.027 14.6 0.0 0.053 13.6 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.1 gi|452211191|ref|YP_007491305.1| - 0.038 13.9 0.0 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_NinH PF06322.6 gi|452211191|ref|YP_007491305.1| - 0.046 13.3 0.0 0.15 11.7 0.0 1.8 2 0 0 2 2 2 0 Phage NinH protein HTH_24 PF13412.1 gi|452211191|ref|YP_007491305.1| - 0.062 12.6 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GcrA PF07750.6 gi|452211191|ref|YP_007491305.1| - 0.076 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 GcrA cell cycle regulator HTH_40 PF14493.1 gi|452211191|ref|YP_007491305.1| - 0.088 13.0 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.2 gi|452211191|ref|YP_007491305.1| - 0.11 12.3 0.0 2 8.2 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_26 PF13443.1 gi|452211191|ref|YP_007491305.1| - 0.15 12.2 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_36 PF13730.1 gi|452211191|ref|YP_007491305.1| - 0.16 12.1 0.1 1.7 8.7 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain RVT_1 PF00078.22 gi|452211193|ref|YP_007491307.1| - 1.4e-40 138.9 0.0 4e-40 137.4 0.0 1.8 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.1 gi|452211193|ref|YP_007491307.1| - 4.4e-29 100.3 2.4 1.2e-28 98.9 1.6 1.8 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase GIIM PF08388.6 gi|452211193|ref|YP_007491307.1| - 8.7e-26 89.5 5.4 2.6e-25 88.0 3.7 1.9 1 0 0 1 1 1 1 Group II intron, maturase-specific domain BAG PF02179.11 gi|452211193|ref|YP_007491307.1| - 0.11 12.5 0.1 2.9 8.0 0.0 2.7 3 0 0 3 3 3 0 BAG domain FliD_N PF02465.13 gi|452211193|ref|YP_007491307.1| - 0.12 12.7 0.3 0.25 11.7 0.2 1.5 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus IstB_IS21 PF01695.12 gi|452211194|ref|YP_007491308.1| - 6.7e-23 81.0 0.0 1e-22 80.4 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein DUF258 PF03193.11 gi|452211194|ref|YP_007491308.1| - 0.0064 15.7 0.2 0.015 14.4 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF258 PhoH PF02562.11 gi|452211194|ref|YP_007491308.1| - 0.011 14.9 0.0 0.02 14.1 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.1 gi|452211194|ref|YP_007491308.1| - 0.015 14.7 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|452211194|ref|YP_007491308.1| - 0.022 14.7 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_17 PF13207.1 gi|452211194|ref|YP_007491308.1| - 0.023 15.5 0.1 0.19 12.5 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|452211194|ref|YP_007491308.1| - 0.045 13.4 0.2 0.088 12.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|452211194|ref|YP_007491308.1| - 0.053 13.2 0.0 0.09 12.5 0.0 1.3 1 0 0 1 1 1 0 Part of AAA domain ABC_tran PF00005.22 gi|452211194|ref|YP_007491308.1| - 0.093 13.0 0.0 0.31 11.3 0.0 1.8 2 0 0 2 2 2 0 ABC transporter AAA PF00004.24 gi|452211194|ref|YP_007491308.1| - 0.11 12.7 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.1 gi|452211194|ref|YP_007491308.1| - 0.11 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Mg_chelatase PF01078.16 gi|452211194|ref|YP_007491308.1| - 0.13 11.4 0.1 0.23 10.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.1 gi|452211194|ref|YP_007491308.1| - 0.15 12.2 0.0 0.3 11.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain HTH_32 PF13565.1 gi|452211196|ref|YP_007491310.1| - 0.14 12.9 0.1 0.15 12.9 0.0 1.1 1 0 0 1 1 1 0 Homeodomain-like domain HTH_23 PF13384.1 gi|452211197|ref|YP_007491311.1| - 4.3e-05 23.0 0.0 6.8e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|452211197|ref|YP_007491311.1| - 0.00084 19.2 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.7 gi|452211197|ref|YP_007491311.1| - 0.0011 18.4 0.0 0.0015 18.0 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.1 gi|452211197|ref|YP_007491311.1| - 0.0035 16.8 0.0 0.014 14.9 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|452211197|ref|YP_007491311.1| - 0.023 14.8 0.0 0.032 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Sigma70_r4_2 PF08281.7 gi|452211197|ref|YP_007491311.1| - 0.046 13.1 0.0 0.13 11.7 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 IstB_IS21 PF01695.12 gi|452211199|ref|YP_007491313.1| - 9.5e-71 236.8 0.0 1.5e-70 236.2 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.24 gi|452211199|ref|YP_007491313.1| - 2.4e-05 24.5 0.0 4.6e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|452211199|ref|YP_007491313.1| - 0.0001 22.2 0.6 0.00033 20.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain Bac_DnaA PF00308.13 gi|452211199|ref|YP_007491313.1| - 0.00011 21.8 0.0 0.00028 20.6 0.0 1.7 1 1 1 2 2 2 1 Bacterial dnaA protein AAA_17 PF13207.1 gi|452211199|ref|YP_007491313.1| - 0.00031 21.5 1.9 0.00098 19.9 0.2 2.3 2 1 0 2 2 2 1 AAA domain PhoH PF02562.11 gi|452211199|ref|YP_007491313.1| - 0.00043 19.5 0.0 0.00066 18.9 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_24 PF13479.1 gi|452211199|ref|YP_007491313.1| - 0.00054 19.5 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|452211199|ref|YP_007491313.1| - 0.00059 19.9 0.5 0.59 10.2 0.0 3.0 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.7 gi|452211199|ref|YP_007491313.1| - 0.0008 18.5 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_28 PF13521.1 gi|452211199|ref|YP_007491313.1| - 0.0024 17.8 0.1 0.0084 16.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|452211199|ref|YP_007491313.1| - 0.0033 17.7 3.2 0.0042 17.3 0.2 2.7 2 2 1 3 3 3 1 AAA domain KTI12 PF08433.5 gi|452211199|ref|YP_007491313.1| - 0.0043 16.2 0.0 0.027 13.6 0.0 2.1 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_25 PF13481.1 gi|452211199|ref|YP_007491313.1| - 0.0058 16.0 0.2 0.018 14.4 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|452211199|ref|YP_007491313.1| - 0.0069 16.1 0.1 0.019 14.6 0.0 1.8 1 0 0 1 1 1 1 Part of AAA domain AAA_5 PF07728.9 gi|452211199|ref|YP_007491313.1| - 0.0085 15.8 0.2 0.052 13.2 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) ArgK PF03308.11 gi|452211199|ref|YP_007491313.1| - 0.015 14.0 0.0 0.047 12.4 0.0 1.8 2 0 0 2 2 2 0 ArgK protein DUF258 PF03193.11 gi|452211199|ref|YP_007491313.1| - 0.015 14.4 0.0 0.025 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 RmuC PF02646.11 gi|452211199|ref|YP_007491313.1| - 0.017 13.9 0.1 0.062 12.1 0.0 1.9 2 0 0 2 2 2 0 RmuC family AAA_10 PF12846.2 gi|452211199|ref|YP_007491313.1| - 0.019 14.4 1.0 0.13 11.6 0.1 2.4 2 1 1 3 3 3 0 AAA-like domain NTPase_1 PF03266.10 gi|452211199|ref|YP_007491313.1| - 0.034 13.8 0.4 5.6 6.6 0.0 2.5 1 1 0 2 2 2 0 NTPase AAA_16 PF13191.1 gi|452211199|ref|YP_007491313.1| - 0.039 13.9 0.1 0.095 12.6 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.18 gi|452211199|ref|YP_007491313.1| - 0.041 13.8 0.0 0.075 12.9 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF815 PF05673.8 gi|452211199|ref|YP_007491313.1| - 0.05 12.5 0.0 0.068 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2893 PF11459.3 gi|452211199|ref|YP_007491313.1| - 0.062 13.0 0.1 11 5.8 0.0 2.6 2 0 0 2 2 2 0 Protein of unknwon function (DUF2893) RNA_helicase PF00910.17 gi|452211199|ref|YP_007491313.1| - 0.1 12.8 0.0 0.24 11.5 0.0 1.7 1 1 0 1 1 1 0 RNA helicase AAA_33 PF13671.1 gi|452211199|ref|YP_007491313.1| - 0.1 12.4 0.0 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|452211199|ref|YP_007491313.1| - 0.13 11.4 0.0 0.29 10.2 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI tRNA-synt_2e PF02091.10 gi|452211200|ref|YP_007491314.1| - 0.032 13.3 0.2 0.037 13.1 0.1 1.1 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit Methylase_S PF01420.14 gi|452211201|ref|YP_007491315.1| - 1.9e-23 83.2 0.0 4.2e-18 65.8 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain NPV_P10 PF05531.7 gi|452211201|ref|YP_007491315.1| - 0.13 12.4 0.1 4.4 7.6 0.0 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein N6_Mtase PF02384.11 gi|452211202|ref|YP_007491316.1| - 1.2e-64 218.3 0.0 1.6e-64 217.9 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|452211202|ref|YP_007491316.1| - 1.2e-14 54.9 0.3 9e-13 48.8 0.0 2.7 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|452211202|ref|YP_007491316.1| - 4e-14 52.6 0.0 9.6e-14 51.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452211202|ref|YP_007491316.1| - 9.2e-09 35.1 0.0 1.6e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|452211202|ref|YP_007491316.1| - 6.5e-05 22.3 0.0 0.00021 20.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|452211202|ref|YP_007491316.1| - 0.00018 21.1 0.0 0.0019 17.8 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|452211202|ref|YP_007491316.1| - 0.0023 17.6 0.0 0.023 14.4 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.6 gi|452211202|ref|YP_007491316.1| - 0.0074 16.6 0.0 0.018 15.3 0.0 1.6 1 0 0 1 1 1 1 Eco57I restriction-modification methylase ResIII PF04851.10 gi|452211203|ref|YP_007491317.1| - 1.7e-31 109.4 2.4 1.1e-30 106.8 0.0 2.7 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|452211203|ref|YP_007491317.1| - 2.9e-29 102.0 1.6 2.9e-29 102.0 1.1 1.8 2 0 0 2 2 2 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|452211203|ref|YP_007491317.1| - 3.3e-12 46.5 0.0 3e-07 30.3 0.0 3.0 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|452211203|ref|YP_007491317.1| - 2.6e-07 30.3 0.1 2.1e-06 27.3 0.0 2.3 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452211203|ref|YP_007491317.1| - 7.3e-06 25.7 0.1 2.2e-05 24.2 0.1 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_19 PF13245.1 gi|452211203|ref|YP_007491317.1| - 6e-05 22.7 0.1 0.00013 21.6 0.1 1.5 1 0 0 1 1 1 1 Part of AAA domain UvrD-helicase PF00580.16 gi|452211203|ref|YP_007491317.1| - 0.00056 19.3 0.1 0.00056 19.3 0.1 2.5 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain DUF853 PF05872.7 gi|452211203|ref|YP_007491317.1| - 0.014 13.7 0.0 0.028 12.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.13 gi|452211203|ref|YP_007491317.1| - 0.045 13.2 0.0 0.68 9.3 0.0 2.6 3 0 0 3 3 3 0 FtsK/SpoIIIE family T2SE PF00437.15 gi|452211203|ref|YP_007491317.1| - 0.098 11.5 0.0 0.26 10.1 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein STAT_int PF02865.12 gi|452211203|ref|YP_007491317.1| - 0.12 12.3 2.0 2.6 8.0 0.2 3.0 3 0 0 3 3 3 0 STAT protein, protein interaction domain Phasin PF05597.6 gi|452211205|ref|YP_007491319.1| - 6.5e-08 32.4 5.2 2.2e-06 27.4 3.6 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF883 PF05957.8 gi|452211205|ref|YP_007491319.1| - 0.013 15.9 1.9 0.013 15.9 1.3 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) OCD_Mu_crystall PF02423.10 gi|452211205|ref|YP_007491319.1| - 0.016 13.9 0.0 0.017 13.9 0.0 1.0 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Seryl_tRNA_N PF02403.17 gi|452211205|ref|YP_007491319.1| - 0.025 14.6 5.8 0.031 14.2 4.0 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain GatB_Yqey PF02637.13 gi|452211205|ref|YP_007491319.1| - 0.025 14.2 0.8 0.031 13.9 0.6 1.2 1 0 0 1 1 1 0 GatB domain DGCR6 PF07324.6 gi|452211205|ref|YP_007491319.1| - 0.026 14.0 1.6 0.032 13.7 1.1 1.0 1 0 0 1 1 1 0 DiGeorge syndrome critical region 6 (DGCR6) protein Spc7 PF08317.6 gi|452211205|ref|YP_007491319.1| - 0.027 13.1 2.1 0.031 12.9 1.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein TipAS PF07739.8 gi|452211205|ref|YP_007491319.1| - 0.051 13.8 2.4 3.4 8.0 0.6 2.1 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain CAGE1 PF15066.1 gi|452211205|ref|YP_007491319.1| - 0.1 11.0 4.7 0.11 10.9 3.2 1.0 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family CARD PF00619.16 gi|452211205|ref|YP_007491319.1| - 0.11 12.3 4.0 0.18 11.6 1.5 1.9 2 0 0 2 2 2 0 Caspase recruitment domain TAFH PF07531.9 gi|452211205|ref|YP_007491319.1| - 0.12 12.0 0.2 0.2 11.2 0.1 1.6 1 1 0 1 1 1 0 NHR1 homology to TAF DUF4011 PF13195.1 gi|452211205|ref|YP_007491319.1| - 0.14 12.1 1.2 0.15 12.0 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4011) Rab_eff_C PF04698.7 gi|452211205|ref|YP_007491319.1| - 0.16 10.0 2.2 0.19 9.8 1.5 1.1 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus DUF1319 PF07028.6 gi|452211205|ref|YP_007491319.1| - 0.24 11.5 4.7 1.6 8.9 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) V_ATPase_I PF01496.14 gi|452211205|ref|YP_007491319.1| - 0.32 8.7 1.7 0.31 8.8 1.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BMFP PF04380.8 gi|452211205|ref|YP_007491319.1| - 0.39 10.8 8.4 4.8 7.3 5.8 2.5 1 1 0 1 1 1 0 Membrane fusogenic activity RRF PF01765.14 gi|452211205|ref|YP_007491319.1| - 1.8 8.0 8.2 6 6.3 3.9 1.8 1 1 0 1 1 1 0 Ribosome recycling factor DUF2730 PF10805.3 gi|452211205|ref|YP_007491319.1| - 2.1 8.1 4.8 6.4 6.5 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Prefoldin PF02996.12 gi|452211205|ref|YP_007491319.1| - 2.3 7.8 7.2 10 5.7 1.3 2.2 1 1 1 2 2 2 0 Prefoldin subunit Pox_A_type_inc PF04508.7 gi|452211205|ref|YP_007491319.1| - 5 7.1 12.4 2.4 8.1 1.3 3.6 3 1 1 4 4 4 0 Viral A-type inclusion protein repeat DUF1515 PF07439.6 gi|452211205|ref|YP_007491319.1| - 8.7 6.2 7.2 5.6 6.8 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) LIF_OSM PF01291.12 gi|452211207|ref|YP_007491321.1| - 0.0045 16.9 1.5 1.5 8.7 0.0 3.1 1 1 2 4 4 4 2 LIF / OSM family Laminin_II PF06009.7 gi|452211207|ref|YP_007491321.1| - 0.062 13.0 21.5 2.1 8.1 1.1 3.4 1 1 2 3 3 3 0 Laminin Domain II Peptidase_S46 PF10459.4 gi|452211207|ref|YP_007491321.1| - 0.13 10.6 23.0 0.018 13.4 13.1 1.5 1 1 0 1 1 1 0 Peptidase S46 DUF2203 PF09969.4 gi|452211207|ref|YP_007491321.1| - 0.27 11.4 16.9 3.4 7.9 1.0 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF3452 PF11934.3 gi|452211207|ref|YP_007491321.1| - 1.1 8.5 7.0 5.6 6.2 4.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) HrpB7 PF09486.5 gi|452211207|ref|YP_007491321.1| - 2.1 8.2 23.1 0.11 12.3 1.8 3.5 2 2 1 3 3 3 0 Bacterial type III secretion protein (HrpB7) DUF2312 PF10073.4 gi|452211207|ref|YP_007491321.1| - 2.8 7.3 8.2 0.87 8.9 0.7 3.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Acetyltransf_11 PF13720.1 gi|452211207|ref|YP_007491321.1| - 3.9 7.7 5.9 12 6.1 0.1 3.3 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NPV_P10 PF05531.7 gi|452211207|ref|YP_007491321.1| - 8.2 6.7 12.0 7.1 6.9 0.3 4.1 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Birna_VP5 PF03042.9 gi|452211210|ref|YP_007491324.1| - 0.032 13.7 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Birnavirus VP5 protein Reo_sigmaC PF04582.7 gi|452211211|ref|YP_007491325.1| - 0.16 11.0 9.3 0.46 9.6 1.1 2.1 1 1 1 2 2 2 0 Reovirus sigma C capsid protein DUF4094 PF13334.1 gi|452211211|ref|YP_007491325.1| - 6.7 7.1 10.1 3.2 8.2 0.0 3.5 2 2 2 4 4 4 0 Domain of unknown function (DUF4094) HTH_24 PF13412.1 gi|452211212|ref|YP_007491326.1| - 0.00015 21.1 0.3 0.00031 20.0 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|452211212|ref|YP_007491326.1| - 0.0018 17.8 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|452211212|ref|YP_007491326.1| - 0.0021 17.7 0.1 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|452211212|ref|YP_007491326.1| - 0.0022 17.6 0.1 0.0051 16.4 0.1 1.5 1 0 0 1 1 1 1 MarR family CarboxypepD_reg PF13620.1 gi|452211212|ref|YP_007491326.1| - 0.0076 16.2 0.1 0.02 14.9 0.0 1.8 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain RNA_pol_Rpc34 PF05158.7 gi|452211212|ref|YP_007491326.1| - 0.0093 15.1 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit FeoC PF09012.5 gi|452211212|ref|YP_007491326.1| - 0.011 15.3 0.1 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Penicillinase_R PF03965.11 gi|452211212|ref|YP_007491326.1| - 0.026 14.6 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor DUF4480 PF13715.1 gi|452211212|ref|YP_007491326.1| - 0.028 14.4 0.1 0.083 12.9 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4480) HTH_27 PF13463.1 gi|452211212|ref|YP_007491326.1| - 0.032 14.5 0.0 0.078 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|452211212|ref|YP_007491326.1| - 0.032 14.0 0.1 0.074 12.8 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_IclR PF09339.5 gi|452211212|ref|YP_007491326.1| - 0.036 13.6 0.0 0.067 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF3982 PF13138.1 gi|452211212|ref|YP_007491326.1| - 0.057 13.3 0.2 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3982) ACT PF01842.20 gi|452211213|ref|YP_007491327.1| - 0.0051 16.2 0.6 1.3 8.5 0.0 2.7 2 1 1 3 3 3 2 ACT domain DUF2007 PF09413.5 gi|452211213|ref|YP_007491327.1| - 0.014 15.1 0.0 1.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2007) Homoserine_dh PF00742.14 gi|452211214|ref|YP_007491328.1| - 2.2e-58 196.8 0.3 4.5e-58 195.8 0.1 1.6 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|452211214|ref|YP_007491328.1| - 2.6e-09 37.4 0.1 5.1e-09 36.5 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|452211214|ref|YP_007491328.1| - 0.00036 20.2 0.3 0.00088 18.9 0.2 1.7 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Saccharop_dh PF03435.13 gi|452211214|ref|YP_007491328.1| - 0.0086 15.0 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase MMR_HSR1 PF01926.18 gi|452211215|ref|YP_007491329.1| - 7.2e-15 54.9 0.0 9.8e-15 54.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|452211215|ref|YP_007491329.1| - 4.1e-11 42.4 0.1 1.5e-09 37.2 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|452211215|ref|YP_007491329.1| - 4.1e-05 23.1 0.0 0.0015 17.9 0.0 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Septin PF00735.13 gi|452211215|ref|YP_007491329.1| - 0.00011 21.3 0.0 0.00018 20.5 0.0 1.4 1 0 0 1 1 1 1 Septin MobB PF03205.9 gi|452211215|ref|YP_007491329.1| - 0.0067 16.1 0.3 0.043 13.5 0.0 2.1 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Dynamin_N PF00350.18 gi|452211215|ref|YP_007491329.1| - 0.0091 15.8 0.4 0.039 13.7 0.3 1.9 1 1 0 1 1 1 1 Dynamin family DUF258 PF03193.11 gi|452211215|ref|YP_007491329.1| - 0.01 15.0 0.2 0.035 13.3 0.1 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|452211215|ref|YP_007491329.1| - 0.019 15.2 0.0 0.039 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain Miro PF08477.8 gi|452211215|ref|YP_007491329.1| - 0.11 13.0 0.1 0.17 12.4 0.1 1.7 1 1 0 1 1 1 0 Miro-like protein AAA_17 PF13207.1 gi|452211215|ref|YP_007491329.1| - 0.12 13.2 0.1 0.22 12.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain DHHA1 PF02272.14 gi|452211216|ref|YP_007491330.1| - 1.6e-15 56.5 0.2 3.7e-15 55.3 0.1 1.6 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|452211216|ref|YP_007491330.1| - 7.9e-08 32.0 0.0 1.6e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 DHH family DUF11 PF01345.13 gi|452211217|ref|YP_007491331.1| - 8.8e-20 70.5 6.9 4.8e-13 48.9 0.8 3.8 4 0 0 4 4 4 3 Domain of unknown function DUF11 CARDB PF07705.6 gi|452211217|ref|YP_007491331.1| - 1e-10 41.5 10.3 0.00033 20.6 0.1 3.5 3 0 0 3 3 3 3 CARDB TRAP_beta PF05753.9 gi|452211217|ref|YP_007491331.1| - 4.3e-09 35.7 8.6 0.001 18.2 0.1 3.2 2 1 1 3 3 3 3 Translocon-associated protein beta (TRAPB) BatD PF13584.1 gi|452211217|ref|YP_007491331.1| - 2.7e-08 32.8 9.6 1.6e-05 23.6 0.6 2.7 3 0 0 3 3 3 2 Oxygen tolerance DUF2393 PF09624.5 gi|452211217|ref|YP_007491331.1| - 2.7e-05 23.7 9.7 0.098 12.1 0.1 3.4 3 0 0 3 3 3 3 Protein of unknown function (DUF2393) NPCBM_assoc PF10633.4 gi|452211217|ref|YP_007491331.1| - 0.17 11.9 4.1 18 5.4 0.1 3.7 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF1034 PF06280.7 gi|452211217|ref|YP_007491331.1| - 0.34 11.3 6.2 0.3 11.5 1.9 2.6 2 1 0 2 2 2 0 Fn3-like domain (DUF1034) Glyco_hydro_2 PF00703.16 gi|452211217|ref|YP_007491331.1| - 0.69 10.3 6.4 3.3 8.1 0.2 3.3 2 1 1 3 3 3 0 Glycosyl hydrolases family 2 Big_3_4 PF13754.1 gi|452211217|ref|YP_007491331.1| - 2.2 8.6 9.9 1.6 9.1 2.1 3.4 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) NIF3 PF01784.13 gi|452211220|ref|YP_007491334.1| - 9.6e-55 185.7 0.1 1.2e-54 185.4 0.0 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) TPR_1 PF00515.23 gi|452211222|ref|YP_007491336.1| - 4.9e-167 535.5 75.0 5.3e-10 38.4 0.6 25.0 25 0 0 25 25 25 23 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211222|ref|YP_007491336.1| - 4.7e-150 487.4 68.7 8.2e-14 51.0 0.5 14.6 10 3 3 15 15 15 15 TPR repeat TPR_2 PF07719.12 gi|452211222|ref|YP_007491336.1| - 4.7e-144 457.0 65.6 2e-07 30.4 0.4 24.9 25 0 0 25 25 25 23 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211222|ref|YP_007491336.1| - 1.5e-110 360.0 10.1 6.2e-11 42.6 0.3 15.9 8 4 9 17 17 17 16 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211222|ref|YP_007491336.1| - 1.5e-94 302.5 65.2 7.8e-06 25.6 0.0 25.5 24 1 1 25 25 25 17 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211222|ref|YP_007491336.1| - 4.3e-94 301.4 94.3 2.9e-07 29.8 0.1 23.7 21 4 4 25 25 24 19 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211222|ref|YP_007491336.1| - 7.1e-83 265.4 12.0 0.00017 21.9 0.0 22.5 6 6 17 23 23 23 17 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211222|ref|YP_007491336.1| - 1.6e-80 265.0 54.4 1.1e-09 38.0 0.1 15.8 4 4 16 20 20 20 20 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211222|ref|YP_007491336.1| - 2e-74 245.4 13.9 1.7e-07 30.9 0.0 12.9 6 2 10 16 16 16 14 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211222|ref|YP_007491336.1| - 4.9e-62 206.1 34.4 6.4e-07 29.6 0.2 14.8 10 4 5 16 16 16 12 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211222|ref|YP_007491336.1| - 3.1e-50 164.0 50.0 0.013 15.2 0.2 21.8 21 2 2 23 23 21 12 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452211222|ref|YP_007491336.1| - 5.1e-42 139.4 46.1 0.0038 17.5 0.1 22.6 23 0 0 23 23 23 7 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211222|ref|YP_007491336.1| - 3.8e-38 129.5 43.7 6.5e-05 22.9 0.1 10.9 5 3 4 11 11 11 10 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 gi|452211222|ref|YP_007491336.1| - 4.7e-24 85.0 18.2 0.0004 19.2 0.0 9.9 2 2 5 9 9 9 8 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.1 gi|452211222|ref|YP_007491336.1| - 2.2e-23 81.8 38.6 0.029 14.2 0.0 17.6 16 4 4 20 20 19 6 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.13 gi|452211222|ref|YP_007491336.1| - 9.5e-20 70.2 74.3 0.068 13.0 0.1 20.9 22 0 0 22 22 22 6 MIT (microtubule interacting and transport) domain DUF3856 PF12968.2 gi|452211222|ref|YP_007491336.1| - 1.6e-15 57.2 18.7 0.54 10.0 0.1 13.6 8 4 4 13 13 12 2 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|452211222|ref|YP_007491336.1| - 2.2e-12 46.6 25.0 1.8e-05 23.9 1.0 8.9 3 3 8 11 11 11 3 Tetratricopeptide repeat TPR_5 PF12688.2 gi|452211222|ref|YP_007491336.1| - 9.7e-12 44.9 16.8 1.1e-07 31.8 0.2 9.3 4 3 3 9 9 8 1 Tetratrico peptide repeat TPR_10 PF13374.1 gi|452211222|ref|YP_007491336.1| - 1.3e-10 40.7 32.4 0.62 10.0 0.0 15.3 17 0 0 17 17 16 2 Tetratricopeptide repeat BTAD PF03704.12 gi|452211222|ref|YP_007491336.1| - 3.9e-09 36.9 18.6 0.0061 16.8 0.2 8.6 4 2 5 10 10 10 3 Bacterial transcriptional activator domain FAT PF02259.18 gi|452211222|ref|YP_007491336.1| - 1.8e-06 27.1 20.4 0.09 11.7 0.2 8.2 4 3 4 8 8 8 3 FAT domain ChAPs PF09295.5 gi|452211222|ref|YP_007491336.1| - 3.3e-05 22.8 5.6 0.052 12.3 0.1 5.3 4 1 2 6 6 6 1 ChAPs (Chs5p-Arf1p-binding proteins) DDT PF02791.12 gi|452211222|ref|YP_007491336.1| - 0.0013 18.5 0.0 11 5.9 0.0 6.1 6 1 1 7 7 6 0 DDT domain TPR_3 PF07720.7 gi|452211222|ref|YP_007491336.1| - 0.0034 17.1 34.7 22 4.9 0.4 13.3 15 0 0 15 15 14 0 Tetratricopeptide repeat EST1_DNA_bind PF10373.4 gi|452211222|ref|YP_007491336.1| - 0.016 14.4 2.8 3.7 6.6 0.0 4.4 4 1 1 5 5 5 0 Est1 DNA/RNA binding domain Rapsyn_N PF10579.4 gi|452211222|ref|YP_007491336.1| - 0.02 14.6 3.1 4.4 7.1 0.0 5.7 7 1 1 8 8 6 0 Rapsyn N-terminal myristoylation and linker region PPR PF01535.15 gi|452211222|ref|YP_007491336.1| - 0.038 13.9 21.3 21 5.3 0.1 11.5 16 0 0 16 16 11 0 PPR repeat DUF627 PF04781.7 gi|452211222|ref|YP_007491336.1| - 0.091 12.3 17.5 24 4.5 0.1 8.3 7 3 2 10 10 9 0 Protein of unknown function (DUF627) TPR_4 PF07721.9 gi|452211222|ref|YP_007491336.1| - 0.88 10.1 23.5 2.7 8.6 0.9 8.2 10 0 0 10 10 7 0 Tetratricopeptide repeat dCMP_cyt_deam_1 PF00383.17 gi|452211224|ref|YP_007491338.1| - 2e-24 85.1 0.0 2.6e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.1 gi|452211224|ref|YP_007491338.1| - 0.0018 17.9 0.0 0.0026 17.4 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase DUF3663 PF12404.3 gi|452211224|ref|YP_007491338.1| - 0.05 13.3 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 Peptidase PPDK_N PF01326.14 gi|452211226|ref|YP_007491340.1| - 5.2e-92 308.3 0.0 9.4e-92 307.5 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|452211226|ref|YP_007491340.1| - 3.8e-59 199.9 0.1 5.8e-59 199.3 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|452211226|ref|YP_007491340.1| - 1.4e-24 85.4 0.3 3.8e-24 84.0 0.2 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain zf-FPG_IleRS PF06827.9 gi|452211227|ref|YP_007491341.1| - 1.8e-05 24.2 2.2 2.4e-05 23.8 1.5 1.2 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS zinc_ribbon_2 PF13240.1 gi|452211227|ref|YP_007491341.1| - 0.004 16.6 3.2 1.1 8.8 0.3 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DUF3342 PF11822.3 gi|452211227|ref|YP_007491341.1| - 0.019 14.0 0.6 0.02 14.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) zf-TFIIB PF13453.1 gi|452211227|ref|YP_007491341.1| - 0.02 14.0 2.8 0.028 13.6 2.0 1.2 1 0 0 1 1 1 0 Transcription factor zinc-finger DZR PF12773.2 gi|452211227|ref|YP_007491341.1| - 0.029 14.1 3.2 0.055 13.2 2.2 1.6 1 1 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|452211227|ref|YP_007491341.1| - 0.029 14.3 2.8 3.5 7.6 0.3 2.2 2 0 0 2 2 2 0 Zinc ribbon domain Nudix_N_2 PF14803.1 gi|452211227|ref|YP_007491341.1| - 0.03 14.0 5.8 1.7 8.4 0.1 2.1 2 0 0 2 2 2 0 Nudix N-terminal zinc-ribbons_6 PF07191.7 gi|452211227|ref|YP_007491341.1| - 0.053 13.3 1.0 0.061 13.1 0.7 1.2 1 0 0 1 1 1 0 zinc-ribbons zf-ribbon_3 PF13248.1 gi|452211227|ref|YP_007491341.1| - 0.059 12.6 5.5 0.56 9.4 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-IS66 PF13005.2 gi|452211227|ref|YP_007491341.1| - 0.069 13.1 1.3 4.9 7.2 0.1 2.1 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 C1_1 PF00130.17 gi|452211227|ref|YP_007491341.1| - 0.07 12.8 2.1 0.095 12.4 1.5 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) ADK_lid PF05191.9 gi|452211227|ref|YP_007491341.1| - 0.083 12.5 2.8 3.3 7.4 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid DUF1272 PF06906.6 gi|452211227|ref|YP_007491341.1| - 0.086 12.7 1.1 0.12 12.2 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Mu-like_Com PF10122.4 gi|452211227|ref|YP_007491341.1| - 0.087 11.8 1.4 0.61 9.1 0.1 2.1 2 0 0 2 2 2 0 Mu-like prophage protein Com LIM PF00412.17 gi|452211227|ref|YP_007491341.1| - 0.12 12.4 3.0 0.41 10.7 2.3 1.6 1 1 0 1 1 1 0 LIM domain OrfB_Zn_ribbon PF07282.6 gi|452211227|ref|YP_007491341.1| - 0.15 11.7 3.4 0.22 11.2 2.3 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn_ribbon_2 PF12674.2 gi|452211227|ref|YP_007491341.1| - 0.16 12.3 3.3 0.43 10.9 2.3 1.7 1 1 0 1 1 1 0 Putative zinc ribbon domain RNHCP PF12647.2 gi|452211227|ref|YP_007491341.1| - 0.19 11.5 1.2 0.26 11.1 0.9 1.3 1 1 0 1 1 1 0 RNHCP domain DUF2321 PF10083.4 gi|452211227|ref|YP_007491341.1| - 0.2 11.1 1.2 1.7 8.1 0.1 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) C1_3 PF07649.7 gi|452211227|ref|YP_007491341.1| - 0.4 10.7 5.8 1.1 9.3 4.1 1.8 1 1 0 1 1 1 0 C1-like domain TF_Zn_Ribbon PF08271.7 gi|452211227|ref|YP_007491341.1| - 0.74 9.1 4.3 4.4 6.7 3.0 2.0 1 1 0 1 1 1 0 TFIIB zinc-binding GFA PF04828.9 gi|452211227|ref|YP_007491341.1| - 0.84 9.6 4.9 5.2 7.0 0.8 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF2688 PF10892.3 gi|452211227|ref|YP_007491341.1| - 1.2 8.8 5.4 5.6 6.7 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) Auto_anti-p27 PF06677.7 gi|452211227|ref|YP_007491341.1| - 1.2 8.8 4.9 2.6 7.9 0.2 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_RNApol_7kD PF03604.8 gi|452211227|ref|YP_007491341.1| - 2.5 7.6 7.5 9.3 5.8 5.3 1.8 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-BED PF02892.10 gi|452211227|ref|YP_007491341.1| - 2.7 7.8 5.7 7.1 6.4 4.0 1.8 1 1 0 1 1 1 0 BED zinc finger Zn_ribbon_recom PF13408.1 gi|452211227|ref|YP_007491341.1| - 3.7 7.8 8.0 10 6.4 1.7 2.0 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain Y1_Tnp PF01797.11 gi|452211228|ref|YP_007491342.1| - 8.1e-21 74.1 0.0 8.8e-21 74.0 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.5 gi|452211228|ref|YP_007491342.1| - 0.04 13.1 0.0 0.078 12.2 0.0 1.4 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) Ecl1 PF12855.2 gi|452211229|ref|YP_007491343.1| - 0.00014 21.0 1.0 0.00014 21.0 0.7 1.1 1 0 0 1 1 1 1 Life-span regulatory factor DUF2116 PF09889.4 gi|452211229|ref|YP_007491343.1| - 0.0011 18.7 2.2 0.0014 18.4 1.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF329 PF03884.9 gi|452211229|ref|YP_007491343.1| - 0.0032 16.9 2.6 0.0037 16.7 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF329) C1_1 PF00130.17 gi|452211229|ref|YP_007491343.1| - 0.0036 16.9 0.8 0.0043 16.7 0.5 1.1 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2256 PF10013.4 gi|452211229|ref|YP_007491343.1| - 0.013 15.2 7.7 0.46 10.2 5.3 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-MYND PF01753.13 gi|452211229|ref|YP_007491343.1| - 0.014 15.2 4.0 0.023 14.5 2.8 1.3 1 1 0 1 1 1 0 MYND finger NinG PF05766.7 gi|452211229|ref|YP_007491343.1| - 0.02 14.6 1.2 0.02 14.6 0.8 1.0 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein DUF581 PF04570.9 gi|452211229|ref|YP_007491343.1| - 0.037 13.3 5.2 0.12 11.6 3.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF581) DUF1272 PF06906.6 gi|452211229|ref|YP_007491343.1| - 0.038 13.8 0.7 0.043 13.6 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-FCS PF06467.9 gi|452211229|ref|YP_007491343.1| - 0.071 12.7 5.8 0.28 10.8 4.0 1.8 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif XPA_N PF01286.13 gi|452211229|ref|YP_007491343.1| - 0.13 11.9 1.7 0.91 9.2 0.0 2.1 2 0 0 2 2 2 0 XPA protein N-terminal Peptidase_C39_2 PF13529.1 gi|452211230|ref|YP_007491344.1| - 7.8e-13 49.0 0.2 7.8e-13 49.0 0.2 2.3 2 1 1 3 3 3 1 Peptidase_C39 like family Cytochrom_D1 PF02239.11 gi|452211231|ref|YP_007491345.1| - 2e-16 59.2 10.4 8e-07 27.6 0.1 3.9 2 2 2 4 4 4 4 Cytochrome D1 heme domain Lactonase PF10282.4 gi|452211231|ref|YP_007491345.1| - 2.1e-16 59.9 5.5 1.6e-06 27.4 0.1 3.9 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|452211231|ref|YP_007491345.1| - 1.5e-12 47.4 8.6 0.00053 19.4 0.4 4.2 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region Str_synth PF03088.11 gi|452211231|ref|YP_007491345.1| - 6.1e-08 32.5 0.4 0.67 10.0 0.0 4.8 2 1 3 5 5 5 1 Strictosidine synthase NHL PF01436.16 gi|452211231|ref|YP_007491345.1| - 7.3e-08 31.9 14.5 0.016 15.1 0.3 5.7 5 1 1 6 6 6 3 NHL repeat PD40 PF07676.7 gi|452211231|ref|YP_007491345.1| - 1.5e-06 27.6 6.5 4.4 7.0 0.1 5.9 5 1 1 6 6 6 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.15 gi|452211231|ref|YP_007491345.1| - 1.8e-06 27.8 11.3 0.43 10.5 0.1 5.4 3 2 2 5 5 5 2 Arylesterase DPPIV_N PF00930.16 gi|452211231|ref|YP_007491345.1| - 5.9e-05 21.8 0.3 0.0037 15.8 0.1 2.9 3 0 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region SBP56 PF05694.6 gi|452211231|ref|YP_007491345.1| - 0.00026 19.6 0.4 7.5 4.9 0.0 4.5 1 1 4 5 5 5 0 56kDa selenium binding protein (SBP56) Me-amine-dh_H PF06433.6 gi|452211231|ref|YP_007491345.1| - 0.00077 18.2 11.6 0.056 12.0 1.4 3.7 1 1 3 4 4 4 4 Methylamine dehydrogenase heavy chain (MADH) DUF4102 PF13356.1 gi|452211231|ref|YP_007491345.1| - 0.00087 19.1 0.0 3.1 7.7 0.0 4.4 2 1 1 4 4 4 1 Domain of unknown function (DUF4102) CPSase_L_chain PF00289.17 gi|452211231|ref|YP_007491345.1| - 0.00087 19.3 1.6 0.3 11.1 0.0 3.5 3 1 0 3 3 3 1 Carbamoyl-phosphate synthase L chain, N-terminal domain MMPL PF03176.10 gi|452211231|ref|YP_007491345.1| - 0.0034 16.1 5.8 0.0094 14.6 0.7 2.7 1 1 2 3 3 3 1 MMPL family DUF1513 PF07433.6 gi|452211231|ref|YP_007491345.1| - 0.0035 16.2 3.8 0.16 10.8 0.1 3.4 3 1 2 5 5 5 1 Protein of unknown function (DUF1513) DUF839 PF05787.8 gi|452211231|ref|YP_007491345.1| - 0.0051 15.8 5.2 0.064 12.1 3.6 2.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF839) P_proprotein PF01483.15 gi|452211231|ref|YP_007491345.1| - 0.0099 15.6 1.1 18 5.2 0.0 4.9 5 1 1 6 6 6 0 Proprotein convertase P-domain Kelch_6 PF13964.1 gi|452211231|ref|YP_007491345.1| - 0.099 12.8 8.5 4.4 7.6 0.1 4.8 6 1 1 7 7 5 0 Kelch motif PBCV_basic_adap PF08789.5 gi|452211231|ref|YP_007491345.1| - 0.25 11.0 11.3 11 5.7 0.1 4.5 5 0 0 5 5 4 0 PBCV-specific basic adaptor domain Imm49 PF15660.1 gi|452211231|ref|YP_007491345.1| - 0.43 10.6 3.6 30 4.7 0.0 4.2 2 2 3 5 5 5 0 Immunity protein 49 Pectinesterase PF01095.14 gi|452211231|ref|YP_007491345.1| - 1.7 7.1 14.8 0.0088 14.6 2.5 2.5 2 1 1 3 3 3 0 Pectinesterase PQQ_3 PF13570.1 gi|452211231|ref|YP_007491345.1| - 1.7 9.0 21.0 4.1 7.7 0.5 5.5 5 0 0 5 5 5 0 PQQ-like domain AAA_4 PF04326.9 gi|452211233|ref|YP_007491347.1| - 1.9e-22 79.6 0.0 3e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 Divergent AAA domain MarC PF01914.12 gi|452211234|ref|YP_007491348.1| - 1.5e-54 184.1 18.2 1.7e-54 184.0 12.6 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.11 gi|452211234|ref|YP_007491348.1| - 3.8e-06 26.4 13.2 1.4e-05 24.6 9.2 1.8 1 1 0 1 1 1 1 Integral membrane protein TerC family LysE PF01810.13 gi|452211234|ref|YP_007491348.1| - 6e-06 25.6 10.1 1.1e-05 24.8 7.0 1.5 1 1 0 1 1 1 1 LysE type translocator PsbX PF06596.6 gi|452211234|ref|YP_007491348.1| - 0.0051 16.4 0.9 0.0051 16.4 0.6 3.7 5 0 0 5 5 5 1 Photosystem II reaction centre X protein (PsbX) DUF4134 PF13572.1 gi|452211234|ref|YP_007491348.1| - 0.9 9.6 11.2 0.074 13.1 2.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) Oxidored_q3 PF00499.15 gi|452211234|ref|YP_007491348.1| - 2.4 7.9 20.1 2.1e+02 1.6 14.0 2.6 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCLP PF12304.3 gi|452211234|ref|YP_007491348.1| - 3.8 6.8 12.2 3.3 7.1 2.8 2.2 2 0 0 2 2 2 0 Beta-casein like protein CobD_Cbib PF03186.8 gi|452211234|ref|YP_007491348.1| - 4.6 6.2 6.3 0.33 9.9 0.1 1.9 2 0 0 2 2 2 0 CobD/Cbib protein DUF3278 PF11683.3 gi|452211234|ref|YP_007491348.1| - 9.6 6.2 13.6 0.37 10.8 0.9 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3278) DrrA_P4M PF14860.1 gi|452211237|ref|YP_007491351.1| - 0.04 13.6 0.3 0.055 13.2 0.2 1.3 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain GDI PF00996.13 gi|452211237|ref|YP_007491351.1| - 0.083 11.1 0.1 0.094 11.0 0.1 1.1 1 0 0 1 1 1 0 GDP dissociation inhibitor DUF3871 PF12987.2 gi|452211237|ref|YP_007491351.1| - 0.091 11.4 0.2 0.094 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) N6_Mtase PF02384.11 gi|452211242|ref|YP_007491356.1| - 9.2e-16 57.7 0.0 5.5e-13 48.6 0.0 2.1 1 1 1 2 2 2 2 N-6 DNA Methylase NUDIX PF00293.23 gi|452211245|ref|YP_007491359.1| - 0.0028 17.2 0.0 0.0039 16.8 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain TRL PF13146.1 gi|452211245|ref|YP_007491359.1| - 0.052 13.5 0.0 0.063 13.2 0.0 1.2 1 0 0 1 1 1 0 TRL-like protein family Rubrerythrin PF02915.12 gi|452211247|ref|YP_007491361.1| - 0.00098 19.4 0.5 2 8.7 0.0 3.2 3 0 0 3 3 3 2 Rubrerythrin Phage_min_cap2 PF06152.6 gi|452211247|ref|YP_007491361.1| - 0.007 15.3 0.5 0.014 14.3 0.4 1.4 1 0 0 1 1 1 1 Phage minor capsid protein 2 PocR PF10114.4 gi|452211248|ref|YP_007491362.1| - 9.5e-68 226.7 0.3 2.3e-67 225.4 0.0 1.9 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|452211248|ref|YP_007491362.1| - 3.6e-37 126.9 0.0 7e-17 61.7 0.0 5.6 5 0 0 5 5 5 4 PAS domain HisKA_2 PF07568.7 gi|452211248|ref|YP_007491362.1| - 1.2e-31 108.3 0.6 1.2e-31 108.3 0.5 3.0 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.19 gi|452211248|ref|YP_007491362.1| - 2.4e-31 107.8 0.0 7.1e-15 54.7 0.0 4.7 4 0 0 4 4 4 4 PAS fold PAS_4 PF08448.5 gi|452211248|ref|YP_007491362.1| - 7e-25 87.2 0.0 2.8e-09 36.9 0.0 5.0 4 1 0 4 4 4 4 PAS fold PAS_3 PF08447.6 gi|452211248|ref|YP_007491362.1| - 2.6e-15 56.2 0.0 1.3e-06 28.4 0.0 4.0 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|452211248|ref|YP_007491362.1| - 6.7e-12 44.8 0.0 0.0012 18.6 0.0 5.0 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|452211248|ref|YP_007491362.1| - 7.1e-10 38.5 0.1 2e-09 37.1 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|452211248|ref|YP_007491362.1| - 2.4e-08 34.2 0.0 0.00067 19.8 0.0 3.3 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.2 gi|452211248|ref|YP_007491362.1| - 5.8e-05 23.0 0.4 7.8 6.5 0.0 5.9 5 2 0 5 5 5 1 PAS fold HATPase_c_2 PF13581.1 gi|452211248|ref|YP_007491362.1| - 0.0026 17.5 0.0 0.006 16.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|452211248|ref|YP_007491362.1| - 0.0039 17.6 0.5 0.019 15.3 0.0 2.5 2 0 0 2 2 2 1 HWE histidine kinase FDC-SP PF15215.1 gi|452211248|ref|YP_007491362.1| - 0.18 12.0 0.2 0.53 10.6 0.0 1.8 2 0 0 2 2 1 0 Follicular dendritic cell secreted peptide Peptidase_M20 PF01546.23 gi|452211249|ref|YP_007491363.1| - 1e-18 67.5 0.0 1.7e-18 66.8 0.0 1.3 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|452211249|ref|YP_007491363.1| - 0.00088 18.9 0.0 0.0018 17.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.9 gi|452211249|ref|YP_007491363.1| - 0.0092 14.7 0.0 0.51 9.0 0.0 3.3 3 1 1 4 4 4 1 M42 glutamyl aminopeptidase UPF0114 PF03350.11 gi|452211250|ref|YP_007491364.1| - 6.1e-27 93.9 5.6 1e-26 93.3 3.9 1.3 1 0 0 1 1 1 1 Uncharacterized protein family, UPF0114 DsbD PF02683.10 gi|452211250|ref|YP_007491364.1| - 0.077 12.5 6.3 0.84 9.1 0.0 2.6 1 1 1 2 2 2 0 Cytochrome C biogenesis protein transmembrane region YrhK PF14145.1 gi|452211250|ref|YP_007491364.1| - 1 9.0 5.6 6.5 6.4 0.1 3.0 2 1 0 2 2 2 0 YrhK-like protein Cation_efflux PF01545.16 gi|452211250|ref|YP_007491364.1| - 2.3 7.2 6.3 0.079 12.0 0.3 1.5 2 0 0 2 2 2 0 Cation efflux family DUF1269 PF06897.7 gi|452211251|ref|YP_007491365.1| - 1.3e-36 124.6 0.4 1.8e-36 124.2 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Gly-zipper_OmpA PF13436.1 gi|452211251|ref|YP_007491365.1| - 0.00083 18.9 0.0 0.0012 18.4 0.0 1.2 1 0 0 1 1 1 1 Glycine-zipper containing OmpA-like membrane domain Gly-zipper_Omp PF13488.1 gi|452211251|ref|YP_007491365.1| - 0.0026 17.3 2.9 0.0044 16.6 2.0 1.4 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.1 gi|452211251|ref|YP_007491365.1| - 0.0087 15.5 6.1 0.069 12.6 4.3 2.1 1 1 0 1 1 1 1 YMGG-like Gly-zipper DUF456 PF04306.8 gi|452211251|ref|YP_007491365.1| - 0.015 15.2 1.9 0.02 14.8 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Bacteriocin_IIc PF10439.4 gi|452211251|ref|YP_007491365.1| - 3.1 7.9 8.9 14 5.8 6.1 1.9 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Romo1 PF10247.4 gi|452211251|ref|YP_007491365.1| - 7.9 6.7 8.1 1.4 9.1 0.7 2.2 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 UPF0118 PF01594.11 gi|452211253|ref|YP_007491367.1| - 6.5e-43 146.9 37.9 7.5e-43 146.7 26.3 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 Tub_2 PF04525.7 gi|452211254|ref|YP_007491368.1| - 2.9e-09 36.5 0.0 3.1e-09 36.5 0.0 1.0 1 0 0 1 1 1 1 Tubby C 2 Fe-ADH PF00465.14 gi|452211255|ref|YP_007491369.1| - 3.8e-127 423.8 3.6 4.4e-127 423.6 2.5 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|452211255|ref|YP_007491369.1| - 2.2e-18 66.4 2.3 1.5e-10 40.8 0.0 2.3 1 1 1 2 2 2 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.1 gi|452211255|ref|YP_007491369.1| - 0.0026 17.1 0.2 0.023 14.0 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein LAGLIDADG_3 PF14528.1 gi|452211255|ref|YP_007491369.1| - 0.1 12.8 0.0 3.4 7.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain DUF1508 PF07411.7 gi|452211255|ref|YP_007491369.1| - 0.15 11.4 0.1 9 5.8 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1508) DUF1882 PF08966.6 gi|452211256|ref|YP_007491370.1| - 0.038 13.9 0.1 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1882) GDE_C PF06202.9 gi|452211257|ref|YP_007491371.1| - 2e-141 471.0 0.0 5.2e-141 469.6 0.0 1.6 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|452211257|ref|YP_007491371.1| - 6.5e-62 208.6 0.0 9.2e-62 208.1 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.8 gi|452211257|ref|YP_007491371.1| - 4.1e-05 22.4 2.5 0.00013 20.7 1.7 1.7 1 1 0 1 1 1 1 Protein of unknown function, DUF608 Glyco_hydro_100 PF12899.2 gi|452211257|ref|YP_007491371.1| - 0.0033 15.8 0.9 0.13 10.5 0.0 2.4 2 1 0 2 2 2 2 Alkaline and neutral invertase Bac_rhamnosid PF05592.6 gi|452211257|ref|YP_007491371.1| - 0.018 13.2 0.0 0.025 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase DUF377 PF04041.8 gi|452211258|ref|YP_007491372.1| - 2.9e-59 200.3 0.0 3.6e-59 200.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF377) Fimbrial_PilY2 PF14481.1 gi|452211258|ref|YP_007491372.1| - 0.14 11.6 0.0 1.1 8.6 0.0 2.2 2 0 0 2 2 2 0 Type 4 fimbrial biogenesis protein PilY2 MarR_2 PF12802.2 gi|452211259|ref|YP_007491373.1| - 7.7e-07 28.6 0.0 9e-07 28.4 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|452211259|ref|YP_007491373.1| - 4.2e-05 23.0 0.0 5.2e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|452211259|ref|YP_007491373.1| - 0.0023 17.6 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452211259|ref|YP_007491373.1| - 0.0052 16.1 0.1 0.0095 15.2 0.0 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|452211259|ref|YP_007491373.1| - 0.0073 15.9 0.0 0.0094 15.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|452211259|ref|YP_007491373.1| - 0.0089 16.3 0.0 0.012 15.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF1495 PF07381.6 gi|452211259|ref|YP_007491373.1| - 0.016 14.8 0.0 0.4 10.3 0.0 2.0 1 1 1 2 2 2 0 Winged helix DNA-binding domain (DUF1495) HTH_5 PF01022.15 gi|452211259|ref|YP_007491373.1| - 0.021 14.4 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.15 gi|452211259|ref|YP_007491373.1| - 0.023 14.8 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.6 gi|452211259|ref|YP_007491373.1| - 0.044 13.6 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.2 gi|452211259|ref|YP_007491373.1| - 0.081 12.7 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma54_DBD PF04552.8 gi|452211259|ref|YP_007491373.1| - 0.11 11.9 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54, DNA binding domain Crp PF00325.15 gi|452211259|ref|YP_007491373.1| - 0.11 11.9 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_Crp_2 PF13545.1 gi|452211259|ref|YP_007491373.1| - 0.12 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PrsW-protease PF13367.1 gi|452211262|ref|YP_007491376.1| - 6.6e-32 110.2 17.5 6.6e-32 110.2 12.1 1.5 2 0 0 2 2 2 1 Protease prsW family Acylphosphatase PF00708.13 gi|452211264|ref|YP_007491378.1| - 1.9e-13 50.3 0.0 2.1e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DmpG_comm PF07836.6 gi|452211264|ref|YP_007491378.1| - 0.076 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain Cation_efflux PF01545.16 gi|452211265|ref|YP_007491379.1| - 1.4e-64 217.9 5.1 1.6e-64 217.7 3.6 1.0 1 0 0 1 1 1 1 Cation efflux family Metalloenzyme PF01676.13 gi|452211266|ref|YP_007491380.1| - 1.3e-10 41.1 0.0 2.1e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|452211266|ref|YP_007491380.1| - 1.1e-06 28.2 0.0 5.2e-06 26.0 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|452211266|ref|YP_007491380.1| - 0.00053 19.2 0.0 0.0016 17.6 0.0 1.8 2 0 0 2 2 2 1 Sulfatase Alk_phosphatase PF00245.15 gi|452211266|ref|YP_007491380.1| - 0.0093 14.7 0.0 0.02 13.6 0.0 1.5 1 0 0 1 1 1 1 Alkaline phosphatase DUF89 PF01937.14 gi|452211267|ref|YP_007491381.1| - 1.3e-55 188.6 0.1 1.6e-55 188.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 RNA_bind_2 PF10133.4 gi|452211268|ref|YP_007491382.1| - 1.1e-23 82.9 1.1 1.2e-23 82.8 0.8 1.0 1 0 0 1 1 1 1 Predicted RNA-binding protein YabP PF07873.6 gi|452211268|ref|YP_007491382.1| - 0.0035 16.8 0.4 0.0042 16.6 0.3 1.3 1 1 0 1 1 1 1 YabP family Gp_dh_C PF02800.15 gi|452211269|ref|YP_007491383.1| - 4.5e-25 87.9 0.0 6.6e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|452211269|ref|YP_007491383.1| - 6.2e-21 74.9 0.2 2.5e-20 72.9 0.0 2.1 2 1 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|452211269|ref|YP_007491383.1| - 5.8e-11 42.3 0.1 1.5e-10 41.0 0.0 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|452211269|ref|YP_007491383.1| - 5.5e-05 23.4 0.1 0.00036 20.8 0.0 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|452211269|ref|YP_007491383.1| - 0.00011 22.5 0.1 0.00038 20.8 0.0 1.9 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|452211269|ref|YP_007491383.1| - 0.0017 17.5 0.1 0.0091 15.1 0.1 2.0 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|452211269|ref|YP_007491383.1| - 0.0021 17.1 0.1 0.0037 16.2 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase GFO_IDH_MocA PF01408.17 gi|452211269|ref|YP_007491383.1| - 0.0024 18.3 0.1 0.0052 17.2 0.1 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.13 gi|452211269|ref|YP_007491383.1| - 0.042 13.8 0.0 0.087 12.8 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_2 PF03446.10 gi|452211269|ref|YP_007491383.1| - 0.05 13.4 0.1 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|452211269|ref|YP_007491383.1| - 0.12 12.8 0.2 0.36 11.2 0.2 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Inositol_P PF00459.20 gi|452211270|ref|YP_007491384.1| - 1.8e-40 138.9 0.0 2e-40 138.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|452211270|ref|YP_007491384.1| - 3.3e-08 32.7 0.1 2.3e-06 26.6 0.0 2.3 2 0 0 2 2 2 2 Fructose-1-6-bisphosphatase NAD_kinase PF01513.16 gi|452211271|ref|YP_007491385.1| - 9.4e-59 198.5 0.4 1.1e-58 198.2 0.3 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|452211271|ref|YP_007491385.1| - 0.035 13.5 0.0 0.075 12.4 0.0 1.5 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain HMGL-like PF00682.14 gi|452211272|ref|YP_007491386.1| - 2.5e-73 246.6 2.5 3.7e-73 246.0 1.7 1.3 1 0 0 1 1 1 1 HMGL-like CTP_transf_3 PF02348.14 gi|452211272|ref|YP_007491386.1| - 0.028 14.0 1.8 0.26 10.8 0.1 2.5 3 0 0 3 3 3 0 Cytidylyltransferase Ribosomal_S13 PF00416.17 gi|452211272|ref|YP_007491386.1| - 0.12 12.8 0.5 5.7 7.4 0.1 2.7 2 0 0 2 2 2 0 Ribosomal protein S13/S18 DZR PF12773.2 gi|452211274|ref|YP_007491388.1| - 0.00023 20.8 1.3 0.00029 20.6 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.14 gi|452211274|ref|YP_007491388.1| - 0.00046 19.8 0.7 0.00047 19.8 0.5 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Zn-ribbon_8 PF09723.5 gi|452211274|ref|YP_007491388.1| - 0.001 18.9 4.6 0.0037 17.1 3.2 1.8 1 1 0 1 1 1 1 Zinc ribbon domain TFIIS_C PF01096.13 gi|452211274|ref|YP_007491388.1| - 0.0011 18.5 4.1 0.12 12.0 0.3 2.1 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) Prok-RING_1 PF14446.1 gi|452211274|ref|YP_007491388.1| - 0.0015 18.2 2.1 0.002 17.8 1.4 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 TF_Zn_Ribbon PF08271.7 gi|452211274|ref|YP_007491388.1| - 0.0031 16.8 3.2 0.42 9.9 0.2 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1 PF03811.8 gi|452211274|ref|YP_007491388.1| - 0.0033 16.8 3.4 0.0061 16.0 0.5 2.1 2 0 0 2 2 2 1 InsA N-terminal domain zf-C3HC4_3 PF13920.1 gi|452211274|ref|YP_007491388.1| - 0.0038 16.8 0.9 0.0049 16.5 0.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) CcmH PF03918.9 gi|452211274|ref|YP_007491388.1| - 0.0066 15.4 0.1 0.0069 15.3 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein PhnA_Zn_Ribbon PF08274.7 gi|452211274|ref|YP_007491388.1| - 0.0081 15.9 1.0 2.1 8.2 0.2 2.2 2 0 0 2 2 2 1 PhnA Zinc-Ribbon RRN7 PF11781.3 gi|452211274|ref|YP_007491388.1| - 0.0089 15.5 1.9 0.67 9.5 0.2 2.2 2 0 0 2 2 2 1 RNA polymerase I-specific transcription initiation factor Rrn7 zf-RING_5 PF14634.1 gi|452211274|ref|YP_007491388.1| - 0.0094 15.6 2.5 0.012 15.2 1.8 1.2 1 0 0 1 1 1 1 zinc-RING finger domain DNA_RNApol_7kD PF03604.8 gi|452211274|ref|YP_007491388.1| - 0.011 15.1 3.3 0.017 14.5 2.3 1.3 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|452211274|ref|YP_007491388.1| - 0.028 13.6 5.0 0.35 10.1 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-trcl PF13451.1 gi|452211274|ref|YP_007491388.1| - 0.035 13.7 2.0 1.3 8.7 0.2 2.1 2 0 0 2 2 2 0 Probable zinc-binding domain Zn_Tnp_IS91 PF14319.1 gi|452211274|ref|YP_007491388.1| - 0.036 13.5 0.8 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain zinc_ribbon_5 PF13719.1 gi|452211274|ref|YP_007491388.1| - 0.039 13.5 6.0 1.7 8.2 4.2 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-RING_2 PF13639.1 gi|452211274|ref|YP_007491388.1| - 0.047 13.5 0.1 0.056 13.2 0.1 1.2 1 0 0 1 1 1 0 Ring finger domain DUF4428 PF14471.1 gi|452211274|ref|YP_007491388.1| - 0.049 13.3 3.6 0.082 12.6 2.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) zf-H2C2_2 PF13465.1 gi|452211274|ref|YP_007491388.1| - 0.05 13.9 5.2 0.38 11.1 0.6 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zinc-ribbons_6 PF07191.7 gi|452211274|ref|YP_007491388.1| - 0.053 13.3 1.9 0.08 12.7 1.3 1.3 1 1 0 1 1 1 0 zinc-ribbons zf-C3HC4_2 PF13923.1 gi|452211274|ref|YP_007491388.1| - 0.069 13.1 1.1 0.091 12.8 0.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_4 PF13717.1 gi|452211274|ref|YP_007491388.1| - 0.075 12.7 6.5 2.9 7.6 4.5 2.2 1 1 0 1 1 1 0 zinc-ribbon domain zf-RING_3 PF14369.1 gi|452211274|ref|YP_007491388.1| - 0.091 12.7 0.8 5.7 7.0 0.1 2.1 2 0 0 2 2 2 0 zinc-finger DUF2197 PF09963.4 gi|452211274|ref|YP_007491388.1| - 0.092 12.7 0.4 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) zf-IS66 PF13005.2 gi|452211274|ref|YP_007491388.1| - 0.094 12.6 3.3 0.31 11.0 0.0 2.1 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 HNH_5 PF14279.1 gi|452211274|ref|YP_007491388.1| - 0.098 12.6 2.3 0.14 12.1 1.6 1.5 1 1 0 1 1 1 0 HNH endonuclease Rubredoxin PF00301.15 gi|452211274|ref|YP_007491388.1| - 0.1 12.4 2.7 0.57 10.0 0.0 2.2 1 1 1 2 2 2 0 Rubredoxin A2L_zn_ribbon PF08792.5 gi|452211274|ref|YP_007491388.1| - 0.16 11.4 4.0 0.44 10.0 0.3 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-RING_4 PF14570.1 gi|452211274|ref|YP_007491388.1| - 0.18 11.4 1.7 0.27 10.8 1.2 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain FYDLN_acid PF09538.5 gi|452211274|ref|YP_007491388.1| - 0.19 12.3 0.6 0.2 12.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) UPF0547 PF10571.4 gi|452211274|ref|YP_007491388.1| - 0.22 11.2 2.5 5.5 6.7 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-AN1 PF01428.11 gi|452211274|ref|YP_007491388.1| - 0.22 11.4 3.0 2.1 8.2 0.2 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger Zn_Tnp_IS1595 PF12760.2 gi|452211274|ref|YP_007491388.1| - 0.25 11.1 5.2 3.2 7.6 0.3 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|452211274|ref|YP_007491388.1| - 0.29 10.8 3.4 0.62 9.7 2.4 1.5 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-FPG_IleRS PF06827.9 gi|452211274|ref|YP_007491388.1| - 0.29 10.8 2.9 0.69 9.6 2.0 1.7 1 1 0 1 1 1 0 Zinc finger found in FPG and IleRS Ogr_Delta PF04606.7 gi|452211274|ref|YP_007491388.1| - 0.39 10.4 3.0 8 6.2 0.2 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger ADK_lid PF05191.9 gi|452211274|ref|YP_007491388.1| - 0.66 9.6 3.0 1.7 8.3 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid GATA PF00320.22 gi|452211274|ref|YP_007491388.1| - 0.97 8.8 5.1 0.46 9.8 0.2 2.0 2 0 0 2 2 2 0 GATA zinc finger DUF3797 PF12677.2 gi|452211274|ref|YP_007491388.1| - 1.5 8.5 8.5 6.9 6.3 0.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-HIT PF04438.11 gi|452211274|ref|YP_007491388.1| - 1.5 8.5 7.1 3.4 7.4 0.2 2.4 3 0 0 3 3 2 0 HIT zinc finger zf-C2H2_6 PF13912.1 gi|452211274|ref|YP_007491388.1| - 2 8.4 4.9 1.6 8.7 0.2 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zinc_ribbon_2 PF13240.1 gi|452211274|ref|YP_007491388.1| - 3.2 7.3 8.3 8.1 6.0 1.3 2.3 1 1 2 3 3 3 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|452211274|ref|YP_007491388.1| - 3.4 7.5 5.5 6.8 6.5 3.8 1.5 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2H2 PF00096.21 gi|452211274|ref|YP_007491388.1| - 6 7.4 6.2 2.6 8.5 0.7 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF3160 PF11369.3 gi|452211275|ref|YP_007491389.1| - 1.2e-294 978.5 1.9 1.4e-294 978.3 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) UbiA PF01040.13 gi|452211276|ref|YP_007491390.1| - 0.094 11.9 3.1 0.097 11.8 2.1 1.0 1 0 0 1 1 1 0 UbiA prenyltransferase family Peptidase_M50B PF13398.1 gi|452211276|ref|YP_007491390.1| - 0.16 11.3 1.4 0.16 11.2 1.0 1.0 1 0 0 1 1 1 0 Peptidase M50B-like DUF872 PF05915.7 gi|452211276|ref|YP_007491390.1| - 0.24 11.2 2.4 0.29 11.0 1.7 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Papilloma_E5 PF03025.9 gi|452211276|ref|YP_007491390.1| - 0.33 10.9 3.5 0.42 10.6 2.5 1.2 1 0 0 1 1 1 0 Papillomavirus E5 DUF4131 PF13567.1 gi|452211276|ref|YP_007491390.1| - 0.42 10.0 2.5 0.45 9.9 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) IncA PF04156.9 gi|452211276|ref|YP_007491390.1| - 2 7.9 8.3 2.5 7.6 5.7 1.2 1 0 0 1 1 1 0 IncA protein SdpI PF13630.1 gi|452211276|ref|YP_007491390.1| - 2 8.1 4.5 2.6 7.7 3.1 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF3040 PF11239.3 gi|452211276|ref|YP_007491390.1| - 6.3 6.9 6.0 9 6.4 4.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) DUF2157 PF09925.4 gi|452211276|ref|YP_007491390.1| - 7.4 6.1 7.4 20 4.7 5.3 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF308 PF03729.8 gi|452211276|ref|YP_007491390.1| - 8.7 6.4 9.8 11 6.0 6.8 1.2 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) Mem_trans PF03547.13 gi|452211277|ref|YP_007491391.1| - 0.044 12.0 1.6 0.049 11.9 1.1 1.0 1 0 0 1 1 1 0 Membrane transport protein TPP_enzyme_C PF02775.16 gi|452211278|ref|YP_007491392.1| - 5.4e-10 39.0 0.0 1.3e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|452211278|ref|YP_007491392.1| - 0.011 15.2 0.3 0.28 10.6 0.0 2.4 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain POR_N PF01855.14 gi|452211278|ref|YP_007491392.1| - 0.012 15.1 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DXP_synthase_N PF13292.1 gi|452211278|ref|YP_007491392.1| - 0.02 13.8 0.1 0.033 13.1 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.19 gi|452211278|ref|YP_007491392.1| - 0.028 13.9 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain DUF1743 PF08489.6 gi|452211279|ref|YP_007491393.1| - 1.5e-24 86.0 0.1 2.1e-22 79.0 0.0 3.0 2 1 1 3 3 3 2 Domain of unknown function (DUF1743) RadC PF04002.10 gi|452211281|ref|YP_007491395.1| - 5.1e-47 158.5 0.0 7.6e-47 158.0 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.1 gi|452211281|ref|YP_007491395.1| - 0.00076 19.0 0.0 0.0012 18.3 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain Toxin-JAB1 PF15659.1 gi|452211281|ref|YP_007491395.1| - 0.0026 17.6 0.0 0.0048 16.8 0.0 1.4 1 0 0 1 1 1 1 JAB-like toxin 1 HHH PF00633.18 gi|452211281|ref|YP_007491395.1| - 0.0027 17.3 0.0 0.0097 15.5 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|452211281|ref|YP_007491395.1| - 0.0032 17.2 0.0 0.0063 16.3 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF4312 PF14189.1 gi|452211281|ref|YP_007491395.1| - 0.027 14.2 1.1 0.063 13.1 0.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4312) MoaE PF02391.12 gi|452211282|ref|YP_007491396.1| - 1.4e-27 95.8 0.3 2.1e-27 95.2 0.2 1.2 1 0 0 1 1 1 1 MoaE protein MobB PF03205.9 gi|452211282|ref|YP_007491396.1| - 1.3e-17 63.7 0.1 2.7e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|452211282|ref|YP_007491396.1| - 0.0049 16.8 1.5 0.15 12.0 0.3 2.3 2 0 0 2 2 2 1 AAA ATPase domain GBP PF02263.14 gi|452211282|ref|YP_007491396.1| - 0.013 14.5 0.7 0.019 14.0 0.5 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain Miro PF08477.8 gi|452211282|ref|YP_007491396.1| - 0.014 15.9 0.4 0.05 14.0 0.1 2.0 2 1 0 2 2 2 0 Miro-like protein UPF0128 PF03673.8 gi|452211282|ref|YP_007491396.1| - 0.039 13.2 0.1 0.072 12.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) DUF463 PF04317.7 gi|452211282|ref|YP_007491396.1| - 0.053 12.0 0.1 0.086 11.3 0.0 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 NTP_transf_3 PF12804.2 gi|452211283|ref|YP_007491397.1| - 2.4e-33 115.4 0.0 3e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|452211283|ref|YP_007491397.1| - 0.0018 17.8 0.0 0.0029 17.1 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF523 PF04463.7 gi|452211284|ref|YP_007491398.1| - 3.2e-16 59.3 0.0 4e-16 59.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF523) SPC25 PF06703.6 gi|452211285|ref|YP_007491399.1| - 0.17 11.4 7.1 0.41 10.2 0.1 3.3 3 1 1 4 4 4 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Bestrophin PF01062.16 gi|452211285|ref|YP_007491399.1| - 4.3 6.1 8.4 0.14 11.1 0.3 2.3 2 0 0 2 2 2 0 Bestrophin, RFP-TM, chloride channel DUF872 PF05915.7 gi|452211285|ref|YP_007491399.1| - 9.4 6.1 7.1 4 7.3 1.3 2.6 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) ATP_bind_3 PF01171.15 gi|452211286|ref|YP_007491400.1| - 2.6e-13 49.8 0.0 4.3e-13 49.1 0.0 1.4 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.14 gi|452211286|ref|YP_007491400.1| - 9.6e-07 28.7 0.0 1.5e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.11 gi|452211286|ref|YP_007491400.1| - 1.3e-05 23.9 0.0 1.8e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|452211286|ref|YP_007491400.1| - 1.6e-05 24.5 0.0 2.1e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|452211286|ref|YP_007491400.1| - 0.00039 19.3 0.0 0.00055 18.9 0.0 1.2 1 0 0 1 1 1 1 NAD synthase ATP_bind_4 PF01902.12 gi|452211286|ref|YP_007491400.1| - 0.001 18.4 0.0 0.0016 17.8 0.0 1.2 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|452211286|ref|YP_007491400.1| - 0.0014 17.9 0.0 0.007 15.6 0.0 2.3 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|452211286|ref|YP_007491400.1| - 0.012 15.0 0.1 0.027 13.9 0.0 1.6 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) RecR PF02132.10 gi|452211286|ref|YP_007491400.1| - 0.036 13.4 1.7 0.036 13.4 1.2 3.4 4 0 0 4 4 4 0 RecR protein Ribosomal_S27e PF01667.12 gi|452211286|ref|YP_007491400.1| - 0.05 13.1 0.5 0.05 13.1 0.4 2.4 2 0 0 2 2 2 0 Ribosomal protein S27 Spt5-NGN PF03439.8 gi|452211286|ref|YP_007491400.1| - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section A2L_zn_ribbon PF08792.5 gi|452211286|ref|YP_007491400.1| - 0.13 11.7 0.4 0.13 11.7 0.3 3.0 4 0 0 4 4 4 0 A2L zinc ribbon domain TctA PF01970.11 gi|452211290|ref|YP_007491404.1| - 9.7e-101 337.1 31.8 1.2e-100 336.9 22.0 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family TMEM191C PF15194.1 gi|452211290|ref|YP_007491404.1| - 0.52 10.1 3.3 0.65 9.8 0.2 2.5 3 0 0 3 3 3 0 TMEM191C family PASTA PF03793.14 gi|452211291|ref|YP_007491405.1| - 7.7e-12 44.6 0.1 1.4e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 PASTA domain BAR_3_WASP_bdg PF10456.4 gi|452211291|ref|YP_007491405.1| - 0.028 13.6 0.1 0.034 13.4 0.0 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein Nup54 PF13874.1 gi|452211291|ref|YP_007491405.1| - 0.079 12.6 0.7 0.12 12.0 0.5 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 Cortex-I_coil PF09304.5 gi|452211291|ref|YP_007491405.1| - 0.086 12.8 3.0 0.096 12.7 1.6 1.6 1 1 0 1 1 1 0 Cortexillin I, coiled coil CENP-Q PF13094.1 gi|452211291|ref|YP_007491405.1| - 0.13 12.3 4.5 0.17 11.9 3.1 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Prefoldin_2 PF01920.15 gi|452211291|ref|YP_007491405.1| - 0.26 11.0 4.0 0.39 10.5 2.1 1.9 1 1 0 1 1 1 0 Prefoldin subunit Osmo_CC PF08946.5 gi|452211291|ref|YP_007491405.1| - 1.1 9.3 4.0 0.55 10.3 0.8 2.0 2 0 0 2 2 2 0 Osmosensory transporter coiled coil zf-C4H2 PF10146.4 gi|452211291|ref|YP_007491405.1| - 1.6 8.7 4.2 2.1 8.3 2.9 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein TPR_11 PF13414.1 gi|452211292|ref|YP_007491406.1| - 4.3e-52 173.6 4.9 2.4e-17 62.3 0.5 3.7 2 1 3 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|452211292|ref|YP_007491406.1| - 1e-43 145.1 2.3 3e-07 29.7 0.0 6.8 6 1 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452211292|ref|YP_007491406.1| - 1e-35 118.7 5.3 2.5e-05 23.8 0.1 6.7 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211292|ref|YP_007491406.1| - 1.7e-29 101.7 5.3 2.2e-09 37.7 0.3 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211292|ref|YP_007491406.1| - 2.1e-28 96.0 2.0 0.0018 18.3 0.0 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211292|ref|YP_007491406.1| - 2.2e-24 85.1 3.9 2.3e-08 33.8 0.0 4.3 2 2 2 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211292|ref|YP_007491406.1| - 3.2e-24 82.8 3.4 0.014 15.1 0.0 6.5 4 2 2 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211292|ref|YP_007491406.1| - 1.2e-21 76.7 17.1 2.6e-06 27.6 0.3 4.4 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211292|ref|YP_007491406.1| - 5.1e-19 67.9 2.5 1.6e-07 31.0 0.1 3.9 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211292|ref|YP_007491406.1| - 1.8e-18 65.3 9.5 0.00033 21.0 0.1 7.0 1 1 6 7 7 7 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211292|ref|YP_007491406.1| - 1.8e-12 46.0 2.3 0.01 15.5 0.0 6.5 4 1 2 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452211292|ref|YP_007491406.1| - 1.7e-09 37.4 2.0 1 9.9 0.1 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452211292|ref|YP_007491406.1| - 3.2e-08 33.3 6.8 0.13 12.1 0.0 5.7 5 1 1 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|452211292|ref|YP_007491406.1| - 3.6e-08 33.0 9.7 1.8 8.5 0.0 5.6 5 0 0 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211292|ref|YP_007491406.1| - 3.2e-06 27.1 1.1 0.13 12.3 0.0 3.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|452211292|ref|YP_007491406.1| - 1.3e-05 24.3 5.1 0.07 12.1 1.4 3.5 2 1 2 4 4 4 3 Tetratricopeptide repeat PPTA PF01239.17 gi|452211292|ref|YP_007491406.1| - 3.5e-05 22.9 0.0 0.0076 15.5 0.0 3.2 3 0 0 3 3 3 1 Protein prenyltransferase alpha subunit repeat NARP1 PF12569.3 gi|452211292|ref|YP_007491406.1| - 0.00015 20.6 0.6 1.7 7.2 0.1 3.4 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 BTAD PF03704.12 gi|452211292|ref|YP_007491406.1| - 0.00037 20.8 2.4 1.6 9.0 0.4 3.3 1 1 2 3 3 3 2 Bacterial transcriptional activator domain TPR_4 PF07721.9 gi|452211292|ref|YP_007491406.1| - 0.00085 19.5 1.1 0.61 10.6 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452211292|ref|YP_007491406.1| - 0.0031 17.5 4.4 0.11 12.6 0.0 3.8 3 1 2 5 5 4 1 Tetratricopeptide repeat DUF3856 PF12968.2 gi|452211292|ref|YP_007491406.1| - 0.0091 15.8 1.2 36 4.1 0.0 4.6 3 2 0 4 4 4 0 Domain of Unknown Function (DUF3856) TPR_21 PF09976.4 gi|452211292|ref|YP_007491406.1| - 0.033 14.1 2.2 0.36 10.7 0.2 2.9 3 1 1 4 4 3 0 Tetratricopeptide repeat PPR PF01535.15 gi|452211292|ref|YP_007491406.1| - 0.05 13.6 0.5 38 4.5 0.0 3.9 3 0 0 3 3 3 0 PPR repeat FAT PF02259.18 gi|452211292|ref|YP_007491406.1| - 0.067 12.1 0.0 15 4.4 0.0 2.7 2 1 1 3 3 3 0 FAT domain MIT PF04212.13 gi|452211292|ref|YP_007491406.1| - 0.072 12.9 4.8 23 4.9 0.0 4.6 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain TPR_1 PF00515.23 gi|452211293|ref|YP_007491407.1| - 1.3e-28 97.3 11.7 4.6e-09 35.5 0.0 4.8 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452211293|ref|YP_007491407.1| - 2.8e-25 86.1 2.8 5.3e-07 29.0 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211293|ref|YP_007491407.1| - 1.5e-22 78.9 1.4 7.4e-13 47.9 0.1 2.4 2 0 0 2 2 2 2 TPR repeat TPR_12 PF13424.1 gi|452211293|ref|YP_007491407.1| - 3.4e-20 71.7 3.6 4.5e-08 32.9 0.1 2.7 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211293|ref|YP_007491407.1| - 4.3e-20 69.9 6.6 1.4e-05 24.5 0.0 4.5 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211293|ref|YP_007491407.1| - 1.3e-17 62.4 1.5 0.00049 20.0 0.0 4.8 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211293|ref|YP_007491407.1| - 1.9e-15 56.4 0.3 3e-08 33.3 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211293|ref|YP_007491407.1| - 1.1e-14 53.5 0.3 0.0011 19.4 0.0 4.2 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211293|ref|YP_007491407.1| - 8.5e-14 51.7 0.5 1.1e-06 29.1 0.0 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211293|ref|YP_007491407.1| - 2.8e-13 48.5 3.4 0.0033 17.0 0.0 4.5 4 1 1 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211293|ref|YP_007491407.1| - 8.1e-10 38.7 4.3 3.8e-07 30.1 0.2 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|452211293|ref|YP_007491407.1| - 3.3e-09 36.5 0.5 0.13 12.7 0.0 4.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211293|ref|YP_007491407.1| - 3.6e-09 36.8 0.6 0.0012 19.1 0.0 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat MIT PF04212.13 gi|452211293|ref|YP_007491407.1| - 7.9e-09 35.2 2.8 0.037 13.8 0.0 4.2 4 0 0 4 4 4 3 MIT (microtubule interacting and transport) domain TPR_10 PF13374.1 gi|452211293|ref|YP_007491407.1| - 4.7e-07 29.5 0.2 0.52 10.3 0.1 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|452211293|ref|YP_007491407.1| - 6.6e-07 28.4 1.3 0.0018 17.1 0.0 2.4 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.1 gi|452211293|ref|YP_007491407.1| - 3.7e-06 26.7 4.0 1 9.2 0.0 3.8 3 1 1 4 4 4 3 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.2 gi|452211293|ref|YP_007491407.1| - 6.5e-05 22.7 0.0 0.53 10.0 0.0 2.9 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|452211293|ref|YP_007491407.1| - 0.00033 19.8 0.0 0.25 10.3 0.0 3.2 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|452211293|ref|YP_007491407.1| - 0.0015 18.3 0.5 3 7.7 0.1 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_5 PF12688.2 gi|452211293|ref|YP_007491407.1| - 0.011 15.8 0.0 7.7 6.5 0.0 2.4 1 1 0 2 2 2 0 Tetratrico peptide repeat PPR PF01535.15 gi|452211293|ref|YP_007491407.1| - 0.014 15.3 1.0 3.2 7.9 0.0 3.6 3 1 0 3 3 3 0 PPR repeat BTAD PF03704.12 gi|452211293|ref|YP_007491407.1| - 0.045 14.0 0.2 1.3 9.3 0.0 2.6 1 1 0 2 2 2 0 Bacterial transcriptional activator domain SNAP PF14938.1 gi|452211293|ref|YP_007491407.1| - 0.64 9.1 4.7 5.4 6.0 0.1 3.1 2 1 1 3 3 3 0 Soluble NSF attachment protein, SNAP CbiA PF01656.18 gi|452211294|ref|YP_007491408.1| - 1.9e-12 47.0 0.0 2.4e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|452211294|ref|YP_007491408.1| - 0.017 14.7 0.0 0.026 14.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain RHH_1 PF01402.16 gi|452211294|ref|YP_007491408.1| - 3.6 7.6 9.1 0.82 9.6 0.5 3.7 5 0 0 5 5 5 0 Ribbon-helix-helix protein, copG family Disaggr_repeat PF06848.6 gi|452211296|ref|YP_007491410.1| - 1.6e-89 298.1 2.6 2.9e-89 297.3 1.8 1.4 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|452211296|ref|YP_007491410.1| - 9.5e-87 289.5 13.4 9.5e-87 289.5 9.3 2.0 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.1 gi|452211296|ref|YP_007491410.1| - 1.4e-12 47.6 28.1 2.9e-10 40.1 7.7 3.0 1 1 2 3 3 3 3 Right handed beta helix region TGFb_propeptide PF00688.13 gi|452211296|ref|YP_007491410.1| - 0.031 13.5 0.0 0.42 9.8 0.0 2.1 2 0 0 2 2 2 0 TGF-beta propeptide PurS PF02700.9 gi|452211299|ref|YP_007491413.1| - 5.2e-29 100.0 0.3 5.8e-29 99.8 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.1 gi|452211300|ref|YP_007491414.1| - 2.6e-48 164.1 0.0 2.9e-48 164.0 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|452211300|ref|YP_007491414.1| - 1.9e-09 37.2 0.0 3e-09 36.5 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.19 gi|452211300|ref|YP_007491414.1| - 7.8e-09 35.1 0.0 2.7e-08 33.4 0.0 1.8 1 1 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.9 gi|452211300|ref|YP_007491414.1| - 3.9e-08 33.0 0.0 6.3e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF4066 PF13278.1 gi|452211300|ref|YP_007491414.1| - 2.1e-06 27.0 0.0 3.2e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Putative amidotransferase SNO PF01174.14 gi|452211300|ref|YP_007491414.1| - 6.2e-05 22.7 0.0 0.00017 21.2 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|452211300|ref|YP_007491414.1| - 0.00036 20.0 0.0 0.00083 18.8 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 FGE-sulfatase PF03781.11 gi|452211301|ref|YP_007491415.1| - 6.9e-49 166.5 1.4 4.4e-48 163.8 1.0 2.0 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF3714 PF12508.3 gi|452211301|ref|YP_007491415.1| - 0.025 14.0 0.1 0.039 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3714) DUF1724 PF08350.5 gi|452211303|ref|YP_007491417.1| - 5.9e-23 80.1 0.0 1.2e-22 79.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452211303|ref|YP_007491417.1| - 0.00012 21.7 0.0 0.00026 20.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|452211303|ref|YP_007491417.1| - 0.0044 17.2 0.0 0.0086 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452211303|ref|YP_007491417.1| - 0.022 14.4 0.0 0.052 13.2 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|452211303|ref|YP_007491417.1| - 0.037 13.8 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452211303|ref|YP_007491417.1| - 0.062 12.9 0.4 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 HTH domain HTH_45 PF14947.1 gi|452211303|ref|YP_007491417.1| - 0.1 12.3 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Herpes_TAF50 PF03326.8 gi|452211303|ref|YP_007491417.1| - 0.13 11.1 0.0 0.19 10.6 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) DUF429 PF04250.8 gi|452211304|ref|YP_007491418.1| - 3.1e-61 206.2 0.0 3.6e-61 206.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) tRNA-synt_His PF13393.1 gi|452211305|ref|YP_007491419.1| - 0.058 12.4 1.3 0.074 12.0 0.9 1.1 1 0 0 1 1 1 0 Histidyl-tRNA synthetase B5 PF03484.10 gi|452211306|ref|YP_007491420.1| - 3.1e-18 65.3 0.2 2.1e-17 62.7 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.12 gi|452211306|ref|YP_007491420.1| - 4.3e-15 55.6 0.0 8.6e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.15 gi|452211306|ref|YP_007491420.1| - 8.7e-07 28.3 0.1 2.4e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) ATP_bind_4 PF01902.12 gi|452211308|ref|YP_007491422.1| - 1.9e-42 145.1 0.0 2.2e-42 144.9 0.0 1.0 1 0 0 1 1 1 1 ATP-binding region PIN PF01850.16 gi|452211308|ref|YP_007491422.1| - 0.13 12.5 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 PIN domain Lactamase_B PF00753.22 gi|452211310|ref|YP_007491424.1| - 5.5e-15 55.5 0.1 1.2e-14 54.3 0.1 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452211310|ref|YP_007491424.1| - 4.7e-05 23.0 0.0 7e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|452211310|ref|YP_007491424.1| - 0.00089 18.9 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain SseC PF04888.7 gi|452211312|ref|YP_007491426.1| - 0.0057 16.0 5.6 0.0073 15.6 3.7 1.3 1 1 0 1 1 1 1 Secretion system effector C (SseC) like family Vps5 PF09325.5 gi|452211312|ref|YP_007491426.1| - 0.0083 15.4 2.0 0.011 14.9 0.2 2.0 2 1 0 2 2 2 1 Vps5 C terminal like GATase PF00117.23 gi|452211313|ref|YP_007491427.1| - 4.7e-48 163.1 0.0 5.9e-48 162.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|452211313|ref|YP_007491427.1| - 1.8e-17 63.4 0.0 4.6e-17 62.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.13 gi|452211314|ref|YP_007491428.1| - 3.7e-95 318.1 1.9 2.4e-90 302.3 0.0 2.7 2 1 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|452211314|ref|YP_007491428.1| - 1.1e-25 90.2 3.8 6.1e-25 87.8 1.1 3.1 3 2 1 4 4 4 1 Anthranilate synthase component I, N terminal region HNOBA PF07701.9 gi|452211314|ref|YP_007491428.1| - 0.0021 17.3 0.1 0.0028 16.8 0.0 1.3 1 0 0 1 1 1 1 Heme NO binding associated TPX2 PF06886.6 gi|452211314|ref|YP_007491428.1| - 1.6 8.8 14.8 5.3 7.1 10.2 2.0 1 0 0 1 1 1 0 Targeting protein for Xklp2 (TPX2) PRAI PF00697.17 gi|452211315|ref|YP_007491429.1| - 4.7e-34 117.6 0.0 7.3e-34 117.0 0.0 1.3 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.12 gi|452211315|ref|YP_007491429.1| - 0.0015 17.7 0.0 0.003 16.7 0.0 1.5 2 0 0 2 2 2 1 Thiamine monophosphate synthase/TENI DUF4152 PF13680.1 gi|452211315|ref|YP_007491429.1| - 0.0067 15.4 0.1 0.021 13.8 0.1 1.7 1 1 0 2 2 2 1 Protein of unknown function (DUF4152) FMN_dh PF01070.13 gi|452211315|ref|YP_007491429.1| - 0.024 13.5 0.0 7.6 5.2 0.0 2.5 2 1 0 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|452211315|ref|YP_007491429.1| - 0.027 13.7 0.0 0.062 12.5 0.0 1.5 2 0 0 2 2 2 0 Histidine biosynthesis protein Glyco_trans_4_4 PF13579.1 gi|452211315|ref|YP_007491429.1| - 0.098 12.7 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_3 PF00591.16 gi|452211316|ref|YP_007491430.1| - 1.3e-97 326.1 0.4 2.3e-97 325.3 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|452211316|ref|YP_007491430.1| - 1.9e-16 59.3 0.2 3.9e-16 58.3 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Trp_syntA PF00290.15 gi|452211317|ref|YP_007491431.1| - 8.7e-94 312.8 0.1 1e-93 312.6 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.12 gi|452211317|ref|YP_007491431.1| - 1.4e-06 27.7 0.3 1.6e-05 24.2 0.2 2.1 2 0 0 2 2 2 1 PcrB family PA PF02225.17 gi|452211317|ref|YP_007491431.1| - 3.3e-05 23.5 0.2 0.15 11.7 0.0 2.7 3 0 0 3 3 3 2 PA domain His_biosynth PF00977.16 gi|452211317|ref|YP_007491431.1| - 0.00019 20.8 0.1 0.00042 19.6 0.1 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein IGPS PF00218.16 gi|452211317|ref|YP_007491431.1| - 0.013 14.5 0.0 0.024 13.6 0.0 1.4 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DHO_dh PF01180.16 gi|452211317|ref|YP_007491431.1| - 0.016 14.2 0.2 0.027 13.4 0.1 1.3 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase NanE PF04131.9 gi|452211317|ref|YP_007491431.1| - 0.017 14.1 0.1 0.055 12.4 0.0 1.8 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PucR PF07905.6 gi|452211317|ref|YP_007491431.1| - 0.038 13.5 0.1 0.17 11.4 0.0 2.2 2 1 0 2 2 2 0 Purine catabolism regulatory protein-like family FMN_dh PF01070.13 gi|452211317|ref|YP_007491431.1| - 0.073 11.9 1.2 0.36 9.6 0.3 2.4 3 0 0 3 3 3 0 FMN-dependent dehydrogenase PALP PF00291.20 gi|452211318|ref|YP_007491432.1| - 7.9e-39 133.6 1.6 1e-38 133.3 1.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme SmpB PF01668.13 gi|452211318|ref|YP_007491432.1| - 0.11 12.3 0.0 0.31 10.8 0.0 1.8 1 0 0 1 1 1 0 SmpB protein IGPS PF00218.16 gi|452211319|ref|YP_007491433.1| - 3.3e-65 219.6 0.1 3.9e-65 219.4 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase NanE PF04131.9 gi|452211319|ref|YP_007491433.1| - 3.1e-05 23.0 0.1 0.0068 15.3 0.0 3.0 3 1 1 4 4 4 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.9 gi|452211319|ref|YP_007491433.1| - 0.0013 17.9 0.0 0.0079 15.3 0.0 2.1 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.13 gi|452211319|ref|YP_007491433.1| - 0.0045 15.8 0.0 0.0085 14.9 0.0 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase PcrB PF01884.12 gi|452211319|ref|YP_007491433.1| - 0.0054 15.9 0.0 0.0083 15.3 0.0 1.3 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|452211319|ref|YP_007491433.1| - 0.013 14.7 0.0 0.025 13.8 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein IMPDH PF00478.20 gi|452211319|ref|YP_007491433.1| - 0.03 13.1 0.0 0.053 12.4 0.0 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.16 gi|452211319|ref|YP_007491433.1| - 0.044 12.7 0.0 0.25 10.2 0.0 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase QRPTase_C PF01729.14 gi|452211319|ref|YP_007491433.1| - 0.058 12.9 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Trp_syntA PF00290.15 gi|452211319|ref|YP_007491433.1| - 0.11 10.9 0.0 0.19 10.2 0.0 1.3 1 0 0 1 1 1 0 Tryptophan synthase alpha chain Bac_luciferase PF00296.15 gi|452211320|ref|YP_007491434.1| - 7.4e-39 133.6 0.0 8.3e-39 133.5 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Cyclase PF04199.8 gi|452211321|ref|YP_007491435.1| - 2.7e-23 82.5 0.0 3.4e-23 82.1 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase Pro_isomerase PF00160.16 gi|452211325|ref|YP_007491439.1| - 6.5e-51 172.5 1.6 7.3e-51 172.4 1.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_red_lgC PF02867.10 gi|452211326|ref|YP_007491440.1| - 1.2e-105 354.1 0.0 1.8e-39 135.7 0.1 3.0 2 1 1 3 3 3 3 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.16 gi|452211326|ref|YP_007491440.1| - 9.7e-15 54.1 0.0 2.1e-14 53.0 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain EamA PF00892.15 gi|452211327|ref|YP_007491441.1| - 1.9e-24 86.0 33.1 6.5e-14 52.0 7.6 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|452211327|ref|YP_007491441.1| - 1.9e-07 31.2 28.3 3.5e-07 30.3 2.2 3.6 3 1 1 4 4 4 3 Multidrug resistance efflux transporter EamA PF00892.15 gi|452211328|ref|YP_007491442.1| - 6.7e-26 90.7 31.9 1.5e-14 54.1 6.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|452211328|ref|YP_007491442.1| - 4.8e-07 29.9 26.2 3.4e-06 27.2 4.2 3.2 2 1 1 3 3 3 3 Multidrug resistance efflux transporter Rnf-Nqr PF02508.9 gi|452211328|ref|YP_007491442.1| - 0.006 16.1 3.0 0.006 16.1 2.1 1.9 1 1 0 1 1 1 1 Rnf-Nqr subunit, membrane protein UPF0546 PF10639.4 gi|452211328|ref|YP_007491442.1| - 2 8.2 6.8 0.44 10.3 0.4 2.7 2 2 0 2 2 2 0 Uncharacterised protein family UPF0546 ABC_tran PF00005.22 gi|452211329|ref|YP_007491443.1| - 1.5e-31 109.5 0.0 2e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|452211329|ref|YP_007491443.1| - 7.2e-10 38.4 0.0 1.1e-07 31.2 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|452211329|ref|YP_007491443.1| - 3.9e-09 36.8 0.0 0.00076 19.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|452211329|ref|YP_007491443.1| - 6.5e-05 22.3 0.1 0.00014 21.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452211329|ref|YP_007491443.1| - 0.00012 22.0 0.1 0.00036 20.5 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 gi|452211329|ref|YP_007491443.1| - 0.00018 20.9 0.1 0.004 16.5 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|452211329|ref|YP_007491443.1| - 0.00027 20.4 0.0 0.002 17.6 0.0 2.0 2 0 0 2 2 2 1 AAA-like domain AAA_22 PF13401.1 gi|452211329|ref|YP_007491443.1| - 0.0006 19.9 0.3 0.0041 17.2 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|452211329|ref|YP_007491443.1| - 0.0013 19.5 0.5 0.0028 18.4 0.1 1.7 2 1 0 2 2 1 1 AAA domain AAA_23 PF13476.1 gi|452211329|ref|YP_007491443.1| - 0.0028 18.0 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.7 gi|452211329|ref|YP_007491443.1| - 0.0044 16.6 0.1 0.12 12.0 0.1 2.4 1 1 1 2 2 2 1 NACHT domain DUF258 PF03193.11 gi|452211329|ref|YP_007491443.1| - 0.0059 15.8 0.0 0.0088 15.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_33 PF13671.1 gi|452211329|ref|YP_007491443.1| - 0.013 15.3 0.1 0.036 13.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|452211329|ref|YP_007491443.1| - 0.014 15.0 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RNA12 PF10443.4 gi|452211329|ref|YP_007491443.1| - 0.018 13.5 0.0 0.038 12.4 0.0 1.5 2 0 0 2 2 2 0 RNA12 protein DUF87 PF01935.12 gi|452211329|ref|YP_007491443.1| - 0.022 14.5 0.6 0.041 13.6 0.1 1.6 2 1 0 2 2 2 0 Domain of unknown function DUF87 IstB_IS21 PF01695.12 gi|452211329|ref|YP_007491443.1| - 0.025 13.9 0.0 0.35 10.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|452211329|ref|YP_007491443.1| - 0.052 13.3 0.0 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Part of AAA domain AAA_18 PF13238.1 gi|452211329|ref|YP_007491443.1| - 0.056 13.7 1.1 0.12 12.6 0.8 2.0 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|452211329|ref|YP_007491443.1| - 0.056 13.4 0.6 0.15 12.0 0.4 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.1 gi|452211329|ref|YP_007491443.1| - 0.056 13.0 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|452211329|ref|YP_007491443.1| - 0.064 12.0 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.1 gi|452211329|ref|YP_007491443.1| - 0.076 12.9 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|452211329|ref|YP_007491443.1| - 0.1 12.7 0.0 0.27 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA helicase AAA_15 PF13175.1 gi|452211329|ref|YP_007491443.1| - 0.1 11.5 0.0 2.4 7.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Arch_ATPase PF01637.13 gi|452211329|ref|YP_007491443.1| - 0.12 11.9 0.0 0.4 10.3 0.0 1.9 2 0 0 2 2 2 0 Archaeal ATPase SH3_2 PF07653.12 gi|452211329|ref|YP_007491443.1| - 0.14 11.6 0.0 0.69 9.4 0.0 2.0 2 0 0 2 2 2 0 Variant SH3 domain DUF296 PF03479.10 gi|452211330|ref|YP_007491444.1| - 3.3e-16 58.9 0.0 3.8e-16 58.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF296) TrmB PF01978.14 gi|452211331|ref|YP_007491445.1| - 0.0021 17.7 0.0 0.0044 16.6 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.9 gi|452211331|ref|YP_007491445.1| - 0.0081 15.9 0.5 0.019 14.7 0.0 1.9 3 0 0 3 3 3 1 Transcriptional regulator PadR-like family MarR_2 PF12802.2 gi|452211331|ref|YP_007491445.1| - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF387 PF04079.11 gi|452211331|ref|YP_007491445.1| - 0.032 13.6 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Putative transcriptional regulators (Ypuh-like) Enolase_C PF00113.17 gi|452211333|ref|YP_007491447.1| - 2.6e-99 331.9 0.7 3.5e-99 331.5 0.5 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|452211333|ref|YP_007491447.1| - 1.7e-62 209.1 0.0 3.7e-62 208.0 0.0 1.6 1 0 0 1 1 1 1 Enolase, N-terminal domain MAAL_C PF07476.6 gi|452211333|ref|YP_007491447.1| - 0.0043 16.0 0.0 0.0076 15.2 0.0 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus MR_MLE_C PF13378.1 gi|452211333|ref|YP_007491447.1| - 0.042 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 Enolase C-terminal domain-like AAA_5 PF07728.9 gi|452211334|ref|YP_007491448.1| - 9.1e-26 90.2 0.0 1.8e-25 89.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|452211334|ref|YP_007491448.1| - 1.8e-05 24.3 0.0 0.0002 20.9 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 gi|452211334|ref|YP_007491448.1| - 7.8e-05 22.8 0.0 0.00023 21.3 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.12 gi|452211334|ref|YP_007491448.1| - 0.016 14.6 0.0 0.027 13.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|452211334|ref|YP_007491448.1| - 0.018 14.2 0.0 0.057 12.5 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|452211334|ref|YP_007491448.1| - 0.036 14.0 0.3 0.2 11.6 0.0 2.4 2 1 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.1 gi|452211334|ref|YP_007491448.1| - 0.066 12.6 0.0 0.42 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain HypA PF01155.14 gi|452211334|ref|YP_007491448.1| - 0.1 12.2 0.1 0.29 10.8 0.0 1.7 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family TPP_enzyme_N PF02776.13 gi|452211335|ref|YP_007491449.1| - 5.5e-51 172.4 0.0 3.5e-50 169.8 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|452211335|ref|YP_007491449.1| - 5.4e-40 136.4 0.1 1.2e-38 132.1 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|452211335|ref|YP_007491449.1| - 3e-22 78.8 0.0 6.9e-22 77.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Pyridox_ox_2 PF12900.2 gi|452211336|ref|YP_007491450.1| - 3e-28 98.4 0.0 3.4e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|452211336|ref|YP_007491450.1| - 3e-09 36.7 0.0 4.5e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TIR_2 PF13676.1 gi|452211338|ref|YP_007491452.1| - 0.087 12.9 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 TIR domain AA_permease_2 PF13520.1 gi|452211339|ref|YP_007491453.1| - 3.7e-27 94.9 49.6 4.6e-27 94.6 34.4 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|452211339|ref|YP_007491453.1| - 6.1e-20 71.0 40.9 8e-20 70.6 28.3 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|452211340|ref|YP_007491454.1| - 5e-27 94.4 48.2 6.6e-27 94.1 33.4 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|452211340|ref|YP_007491454.1| - 2.2e-19 69.1 42.8 7.8e-19 67.3 29.7 1.7 1 1 0 1 1 1 1 Amino acid permease Prok-RING_1 PF14446.1 gi|452211341|ref|YP_007491455.1| - 0.078 12.7 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Enterotoxin_b PF01376.13 gi|452211342|ref|YP_007491456.1| - 0.11 12.3 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain TauE PF01925.14 gi|452211343|ref|YP_007491457.1| - 7.8e-46 156.4 31.7 9.2e-46 156.2 21.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MacB_PCD PF12704.2 gi|452211344|ref|YP_007491458.1| - 2.2e-32 112.4 0.7 3.8e-32 111.7 0.5 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452211344|ref|YP_007491458.1| - 1.5e-24 86.0 13.6 4.3e-24 84.5 7.1 2.2 2 0 0 2 2 2 1 FtsX-like permease family DUF788 PF05620.6 gi|452211344|ref|YP_007491458.1| - 0.49 10.2 2.8 5.7 6.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF788) MarR PF01047.17 gi|452211345|ref|YP_007491459.1| - 1.3e-14 53.5 0.1 2.7e-14 52.6 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|452211345|ref|YP_007491459.1| - 7.8e-10 38.9 0.0 1.2e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452211345|ref|YP_007491459.1| - 9.2e-10 38.0 0.0 1.6e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 MarR family HxlR PF01638.12 gi|452211345|ref|YP_007491459.1| - 2.5e-05 23.8 0.0 4.6e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|452211345|ref|YP_007491459.1| - 7.8e-05 22.1 0.0 0.00016 21.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_45 PF14947.1 gi|452211345|ref|YP_007491459.1| - 0.00012 21.7 0.0 0.0002 21.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|452211345|ref|YP_007491459.1| - 0.0002 21.3 0.0 0.00036 20.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452211345|ref|YP_007491459.1| - 0.00029 20.4 0.0 0.00072 19.2 0.0 1.8 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF387 PF04079.11 gi|452211345|ref|YP_007491459.1| - 0.0012 18.1 0.0 0.0018 17.6 0.0 1.4 1 1 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) DUF3116 PF11313.3 gi|452211345|ref|YP_007491459.1| - 0.008 15.7 0.0 0.015 14.8 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3116) FeoC PF09012.5 gi|452211345|ref|YP_007491459.1| - 0.011 15.4 0.6 0.061 13.0 0.0 2.4 2 1 1 3 3 3 0 FeoC like transcriptional regulator Fe_dep_repress PF01325.14 gi|452211345|ref|YP_007491459.1| - 0.02 14.8 0.1 0.089 12.7 0.0 2.1 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.1 gi|452211345|ref|YP_007491459.1| - 0.022 14.5 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF1018 PF06252.7 gi|452211345|ref|YP_007491459.1| - 0.024 15.1 0.0 0.039 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) DUF4364 PF14277.1 gi|452211345|ref|YP_007491459.1| - 0.038 13.5 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) PadR PF03551.9 gi|452211345|ref|YP_007491459.1| - 0.044 13.5 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Ftsk_gamma PF09397.5 gi|452211345|ref|YP_007491459.1| - 0.056 13.1 0.1 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Ftsk gamma domain B-block_TFIIIC PF04182.7 gi|452211345|ref|YP_007491459.1| - 0.1 12.4 0.0 0.17 11.7 0.0 1.4 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC Cas_APE2256 PF09651.5 gi|452211345|ref|YP_007491459.1| - 0.13 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_APE2256) MMPL PF03176.10 gi|452211346|ref|YP_007491460.1| - 1.2e-61 208.2 10.6 1.1e-30 106.5 0.9 2.3 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.3 gi|452211346|ref|YP_007491460.1| - 9.7e-13 47.8 18.8 1.8e-07 30.7 4.2 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.14 gi|452211346|ref|YP_007491460.1| - 3.6e-10 37.9 29.6 5.1e-06 24.2 7.2 2.3 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family SecD_SecF PF02355.11 gi|452211346|ref|YP_007491460.1| - 1.6e-09 37.2 11.6 1.6e-09 37.2 8.0 2.9 2 1 0 2 2 2 1 Protein export membrane protein Patched PF02460.13 gi|452211346|ref|YP_007491460.1| - 2.7e-09 35.5 21.3 5.6e-06 24.5 5.9 2.5 3 0 0 3 3 3 2 Patched family MarR PF01047.17 gi|452211348|ref|YP_007491462.1| - 7.5e-11 41.5 0.1 1.3e-10 40.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|452211348|ref|YP_007491462.1| - 3.4e-09 36.9 0.1 6.8e-09 35.9 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|452211348|ref|YP_007491462.1| - 6.2e-08 32.2 0.0 1.2e-07 31.2 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|452211348|ref|YP_007491462.1| - 0.00032 20.6 0.1 0.00074 19.5 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.7 gi|452211348|ref|YP_007491462.1| - 0.00056 19.6 0.0 0.0011 18.7 0.0 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_45 PF14947.1 gi|452211348|ref|YP_007491462.1| - 0.00059 19.5 1.3 0.00081 19.1 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix TrmB PF01978.14 gi|452211348|ref|YP_007491462.1| - 0.022 14.4 0.1 0.089 12.5 0.0 2.0 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Ftsk_gamma PF09397.5 gi|452211348|ref|YP_007491462.1| - 0.023 14.3 0.0 0.049 13.3 0.0 1.5 1 0 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.12 gi|452211348|ref|YP_007491462.1| - 0.024 14.2 0.1 0.061 12.9 0.0 1.7 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|452211348|ref|YP_007491462.1| - 0.037 13.6 0.0 0.095 12.2 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain FeoC PF09012.5 gi|452211348|ref|YP_007491462.1| - 0.037 13.7 0.1 0.11 12.2 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator DUF3116 PF11313.3 gi|452211348|ref|YP_007491462.1| - 0.1 12.1 1.6 0.35 10.4 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3116) TrmB PF01978.14 gi|452211349|ref|YP_007491463.1| - 1.6e-24 85.3 0.0 2.2e-24 84.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|452211349|ref|YP_007491463.1| - 3.1e-06 26.6 0.0 7e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|452211349|ref|YP_007491463.1| - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|452211349|ref|YP_007491463.1| - 0.0024 17.9 0.0 0.0048 16.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.2 gi|452211349|ref|YP_007491463.1| - 0.0026 17.4 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|452211349|ref|YP_007491463.1| - 0.0059 16.2 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.1 gi|452211349|ref|YP_007491463.1| - 0.011 15.7 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|452211349|ref|YP_007491463.1| - 0.017 14.4 0.0 0.042 13.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|452211349|ref|YP_007491463.1| - 0.021 14.5 0.1 1.5 8.6 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_20 PF12840.2 gi|452211349|ref|YP_007491463.1| - 0.023 14.4 0.0 0.036 13.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|452211349|ref|YP_007491463.1| - 0.044 13.3 0.0 0.086 12.4 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain MerR_1 PF13411.1 gi|452211349|ref|YP_007491463.1| - 0.074 12.8 0.1 5.9 6.7 0.0 2.3 2 0 0 2 2 2 0 MerR HTH family regulatory protein Penicillinase_R PF03965.11 gi|452211349|ref|YP_007491463.1| - 0.1 12.6 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor UPF0118 PF01594.11 gi|452211350|ref|YP_007491464.1| - 3.7e-41 141.1 23.6 4.6e-41 140.8 16.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 ABC_tran PF00005.22 gi|452211351|ref|YP_007491465.1| - 2.3e-25 89.4 0.0 3.1e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452211351|ref|YP_007491465.1| - 5.2e-14 52.8 0.7 3.4e-09 37.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|452211351|ref|YP_007491465.1| - 7.2e-09 35.1 0.0 7.4e-07 28.5 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|452211351|ref|YP_007491465.1| - 0.00045 20.6 0.1 0.00091 19.6 0.1 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|452211351|ref|YP_007491465.1| - 0.0061 15.8 0.2 0.47 9.6 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.1 gi|452211351|ref|YP_007491465.1| - 0.01 14.3 0.2 2.5 6.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|452211351|ref|YP_007491465.1| - 0.015 14.7 0.3 0.026 14.0 0.2 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.1 gi|452211351|ref|YP_007491465.1| - 0.022 14.6 0.2 1.8 8.4 0.0 2.3 1 1 1 2 2 2 0 AAA domain AAA PF00004.24 gi|452211351|ref|YP_007491465.1| - 0.023 14.9 0.0 0.04 14.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|452211351|ref|YP_007491465.1| - 0.029 14.3 0.0 0.05 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.16 gi|452211351|ref|YP_007491465.1| - 0.043 12.9 0.1 0.063 12.4 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_17 PF13207.1 gi|452211351|ref|YP_007491465.1| - 0.061 14.1 0.0 0.24 12.2 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|452211351|ref|YP_007491465.1| - 0.078 12.8 0.1 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|452211351|ref|YP_007491465.1| - 0.094 12.2 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|452211351|ref|YP_007491465.1| - 0.15 11.2 0.1 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Ion_trans_2 PF07885.11 gi|452211354|ref|YP_007491468.1| - 1e-23 82.8 10.8 1.3e-23 82.5 7.5 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.26 gi|452211354|ref|YP_007491468.1| - 0.0015 17.8 2.7 0.0024 17.1 1.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF2254 PF10011.4 gi|452211354|ref|YP_007491468.1| - 0.011 14.2 0.0 0.013 13.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Lig_chan PF00060.21 gi|452211354|ref|YP_007491468.1| - 0.09 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Ligand-gated ion channel DUF2099 PF09872.4 gi|452211357|ref|YP_007491471.1| - 3.7e-114 380.1 2.8 4.2e-114 379.9 2.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Saccharop_dh PF03435.13 gi|452211357|ref|YP_007491471.1| - 0.014 14.4 1.4 0.14 11.1 0.3 2.5 3 0 0 3 3 3 0 Saccharopine dehydrogenase MTH865 PF07747.6 gi|452211358|ref|YP_007491472.1| - 1.1e-34 117.9 0.1 1.2e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_20 PF12840.2 gi|452211360|ref|YP_007491474.1| - 1.1e-05 25.1 0.6 5.5e-05 22.8 0.1 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|452211360|ref|YP_007491474.1| - 0.00026 20.7 2.4 0.00031 20.4 0.0 2.4 2 1 1 3 3 3 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|452211360|ref|YP_007491474.1| - 0.0059 16.2 0.6 0.015 14.9 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.5 gi|452211360|ref|YP_007491474.1| - 0.016 14.9 0.7 0.11 12.2 0.1 2.5 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain Mrr_N PF14338.1 gi|452211360|ref|YP_007491474.1| - 0.042 13.9 0.3 0.24 11.5 0.0 2.4 3 0 0 3 3 3 0 Mrr N-terminal domain Ubiq_cyt_C_chap PF03981.7 gi|452211360|ref|YP_007491474.1| - 0.046 13.5 0.1 0.084 12.7 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone HTH_24 PF13412.1 gi|452211360|ref|YP_007491474.1| - 0.066 12.6 0.0 0.22 10.9 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding CCDC66 PF15236.1 gi|452211360|ref|YP_007491474.1| - 0.081 12.5 1.8 0.26 10.8 0.0 2.5 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 66 Mod_r PF07200.8 gi|452211360|ref|YP_007491474.1| - 0.12 12.2 6.0 0.54 10.1 0.7 2.8 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF2099 PF09872.4 gi|452211362|ref|YP_007491476.1| - 9.4e-117 388.5 1.4 1.1e-116 388.4 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Usp PF00582.21 gi|452211362|ref|YP_007491476.1| - 0.018 15.2 0.2 0.031 14.4 0.2 1.4 1 0 0 1 1 1 0 Universal stress protein family Beta_helix PF13229.1 gi|452211364|ref|YP_007491478.1| - 1.4e-09 37.9 22.9 4.2e-07 29.8 15.9 2.6 1 1 0 1 1 1 1 Right handed beta helix region Glyco_hydro_28 PF00295.12 gi|452211364|ref|YP_007491478.1| - 6.7e-05 22.0 2.6 0.00015 20.8 1.8 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Pectate_lyase_3 PF12708.2 gi|452211364|ref|YP_007491478.1| - 0.00041 20.5 14.9 0.00092 19.3 10.3 1.8 1 1 0 1 1 1 1 Pectate lyase superfamily protein TPR_7 PF13176.1 gi|452211365|ref|YP_007491479.1| - 0.025 14.3 0.1 0.025 14.3 0.0 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452211365|ref|YP_007491479.1| - 0.031 13.9 0.1 0.04 13.5 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat AMP-binding_C_2 PF14535.1 gi|452211369|ref|YP_007491483.1| - 1.1e-29 102.2 0.4 2.5e-29 101.1 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|452211369|ref|YP_007491483.1| - 1.7e-21 76.1 0.0 3.8e-21 74.9 0.0 1.5 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|452211369|ref|YP_007491483.1| - 0.00028 19.6 0.0 0.0006 18.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-protein synthetase, LuxE DUF1843 PF08898.5 gi|452211369|ref|YP_007491483.1| - 0.1 12.6 0.1 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1843) NnrU PF07298.6 gi|452211371|ref|YP_007491485.1| - 3.6e-06 26.4 4.8 7.2e-06 25.5 3.3 1.4 1 1 0 1 1 1 1 NnrU protein PEMT PF04191.8 gi|452211371|ref|YP_007491485.1| - 0.00029 20.8 0.2 0.00055 20.0 0.2 1.6 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF3754 PF12576.3 gi|452211371|ref|YP_007491485.1| - 0.056 13.0 0.3 0.15 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3754) FLILHELTA PF10306.4 gi|452211371|ref|YP_007491485.1| - 0.16 12.0 0.8 0.25 11.3 0.2 1.7 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA MFS_1 PF07690.11 gi|452211371|ref|YP_007491485.1| - 0.41 9.3 7.2 0.29 9.7 4.2 1.3 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF1294 PF06961.8 gi|452211373|ref|YP_007491487.1| - 2.1e-22 78.7 0.1 2.8e-22 78.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) FA_desaturase PF00487.19 gi|452211373|ref|YP_007491487.1| - 0.04 13.3 2.7 0.051 13.0 1.9 1.2 1 0 0 1 1 1 0 Fatty acid desaturase Rubrerythrin PF02915.12 gi|452211374|ref|YP_007491488.1| - 1e-07 32.3 2.1 1.1e-07 32.2 1.4 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.5 gi|452211374|ref|YP_007491488.1| - 0.00022 21.4 0.8 0.00027 21.1 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF4142 PF13628.1 gi|452211374|ref|YP_007491488.1| - 0.00085 19.3 0.0 0.0014 18.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) COQ7 PF03232.8 gi|452211374|ref|YP_007491488.1| - 0.002 17.6 0.4 0.0023 17.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 DUF2202 PF09968.4 gi|452211374|ref|YP_007491488.1| - 0.023 14.3 0.5 0.041 13.5 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein domain (DUF2202) Ferritin PF00210.19 gi|452211374|ref|YP_007491488.1| - 0.028 14.1 0.5 0.033 13.9 0.3 1.2 1 0 0 1 1 1 0 Ferritin-like domain DUF305 PF03713.8 gi|452211374|ref|YP_007491488.1| - 0.029 14.1 0.1 0.033 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF305) DUF211 PF02680.9 gi|452211374|ref|YP_007491488.1| - 0.081 12.7 0.5 0.8 9.5 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized ArCR, COG1888 Elf-1_N PF12310.3 gi|452211374|ref|YP_007491488.1| - 0.093 12.6 0.3 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 Transcription factor protein N terminal Ferritin_2 PF13668.1 gi|452211374|ref|YP_007491488.1| - 0.096 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Ferritin-like domain GSDH PF07995.6 gi|452211375|ref|YP_007491489.1| - 1.9e-32 112.6 0.0 6.4e-32 110.9 0.0 1.8 1 1 0 1 1 1 1 Glucose / Sorbosone dehydrogenase NHL PF01436.16 gi|452211375|ref|YP_007491489.1| - 2.7e-05 23.8 0.2 0.37 10.8 0.0 3.7 5 0 0 5 5 5 2 NHL repeat SGL PF08450.7 gi|452211375|ref|YP_007491489.1| - 0.0025 17.2 0.0 0.015 14.6 0.0 2.1 2 1 0 2 2 2 1 SMP-30/Gluconolaconase/LRE-like region Tachylectin PF14517.1 gi|452211375|ref|YP_007491489.1| - 0.12 11.6 0.0 2.9 7.1 0.0 2.7 2 1 0 2 2 2 0 Tachylectin ATP-synt_10 PF05176.9 gi|452211376|ref|YP_007491490.1| - 4.9e-13 48.9 0.0 5.4e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 ATP10 protein IMS PF00817.15 gi|452211379|ref|YP_007491493.1| - 2e-44 151.0 0.0 3e-44 150.4 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.3 gi|452211379|ref|YP_007491493.1| - 1.8e-17 63.4 0.5 3.2e-17 62.6 0.3 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|452211379|ref|YP_007491493.1| - 6.2e-11 41.6 0.0 2e-10 40.0 0.0 2.0 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|452211379|ref|YP_007491493.1| - 2.7e-07 30.6 0.0 1e-06 28.8 0.0 2.0 1 1 0 1 1 1 1 Helix-hairpin-helix domain Cdd1 PF11731.3 gi|452211379|ref|YP_007491493.1| - 0.00062 19.6 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.1 gi|452211379|ref|YP_007491493.1| - 0.0078 16.1 0.0 0.019 14.9 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4332) TfoX_C PF04994.8 gi|452211379|ref|YP_007491493.1| - 0.025 14.5 0.0 0.061 13.2 0.0 1.7 1 0 0 1 1 1 0 TfoX C-terminal domain UPF0118 PF01594.11 gi|452211380|ref|YP_007491494.1| - 4.6e-40 137.5 49.8 5.1e-40 137.4 34.5 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 CytB6-F_Fe-S PF08802.5 gi|452211380|ref|YP_007491494.1| - 0.11 12.5 0.5 0.11 12.5 0.3 3.2 3 1 0 3 3 3 0 Cytochrome B6-F complex Fe-S subunit SDH_sah PF01972.11 gi|452211381|ref|YP_007491495.1| - 3.2e-75 252.5 0.4 3.5e-75 252.4 0.2 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.18 gi|452211381|ref|YP_007491495.1| - 2.5e-06 27.2 0.0 3.2e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 Clp protease Peptidase_S49 PF01343.13 gi|452211381|ref|YP_007491495.1| - 0.00015 21.5 0.0 0.00029 20.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 TPR_12 PF13424.1 gi|452211382|ref|YP_007491496.1| - 3e-75 248.1 17.3 1.6e-23 82.4 0.4 5.1 3 1 1 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211382|ref|YP_007491496.1| - 2.2e-73 240.3 8.9 4.4e-12 45.5 0.0 8.0 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211382|ref|YP_007491496.1| - 1.9e-49 165.1 26.7 4.6e-13 48.5 0.0 5.2 2 2 4 6 6 6 6 TPR repeat TPR_1 PF00515.23 gi|452211382|ref|YP_007491496.1| - 1.5e-46 154.1 13.8 8.5e-08 31.4 0.1 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211382|ref|YP_007491496.1| - 2.2e-42 139.4 16.1 9.7e-08 31.2 0.0 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452211382|ref|YP_007491496.1| - 4.1e-37 123.1 15.3 2.9e-05 23.6 0.1 8.2 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211382|ref|YP_007491496.1| - 1.6e-23 80.6 15.1 0.0024 17.5 0.2 7.5 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211382|ref|YP_007491496.1| - 5e-22 78.0 0.6 3.4e-06 27.5 0.0 5.0 4 1 1 5 5 4 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211382|ref|YP_007491496.1| - 5.2e-17 60.8 3.1 0.046 14.3 0.0 7.6 4 2 4 8 8 8 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211382|ref|YP_007491496.1| - 1e-13 50.3 7.4 0.095 12.9 0.0 8.2 7 5 0 7 7 6 3 Tetratricopeptide repeat SNAP PF14938.1 gi|452211382|ref|YP_007491496.1| - 5.6e-12 45.3 0.0 0.00014 21.1 0.0 3.2 2 1 0 3 3 3 2 Soluble NSF attachment protein, SNAP MIT PF04212.13 gi|452211382|ref|YP_007491496.1| - 6.6e-12 45.1 15.1 0.25 11.2 0.1 6.9 5 2 1 7 7 7 4 MIT (microtubule interacting and transport) domain 14-3-3 PF00244.15 gi|452211382|ref|YP_007491496.1| - 2e-10 40.1 1.5 0.0056 15.7 0.0 4.0 3 1 1 4 4 4 2 14-3-3 protein TPR_19 PF14559.1 gi|452211382|ref|YP_007491496.1| - 3.6e-10 40.0 13.3 0.19 12.1 0.4 6.3 1 1 7 8 8 8 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211382|ref|YP_007491496.1| - 1.6e-08 34.5 6.3 0.007 16.4 0.0 4.5 1 1 5 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_5 PF12688.2 gi|452211382|ref|YP_007491496.1| - 6.7e-08 32.5 3.6 0.01 15.8 0.1 4.2 4 1 0 4 4 4 2 Tetratrico peptide repeat TPR_6 PF13174.1 gi|452211382|ref|YP_007491496.1| - 7.6e-08 32.3 11.6 2.9 8.5 0.0 7.0 7 2 0 7 7 6 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|452211382|ref|YP_007491496.1| - 9.8e-08 31.1 2.8 4.6 6.5 0.0 6.8 7 0 0 7 7 7 0 SHNi-TPR DUF2225 PF09986.4 gi|452211382|ref|YP_007491496.1| - 2e-06 27.4 6.4 0.0086 15.5 0.1 3.5 1 1 3 4 4 4 3 Uncharacterized protein conserved in bacteria (DUF2225) TPR_9 PF13371.1 gi|452211382|ref|YP_007491496.1| - 2.8e-06 27.1 0.2 0.18 11.6 0.0 4.7 3 2 1 4 4 4 1 Tetratricopeptide repeat RPN7 PF10602.4 gi|452211382|ref|YP_007491496.1| - 5.7e-06 25.8 4.1 0.69 9.2 0.0 5.0 2 2 3 5 5 5 1 26S proteasome subunit RPN7 SPO22 PF08631.5 gi|452211382|ref|YP_007491496.1| - 3.1e-05 23.1 2.9 0.0084 15.2 1.0 2.9 2 1 1 3 3 3 2 Meiosis protein SPO22/ZIP4 like PPR PF01535.15 gi|452211382|ref|YP_007491496.1| - 0.00012 21.8 12.4 1.4 9.0 0.0 7.8 9 0 0 9 9 8 1 PPR repeat Tcf25 PF04910.9 gi|452211382|ref|YP_007491496.1| - 0.00019 20.5 1.0 3.6 6.4 0.0 4.3 2 1 4 6 6 6 1 Transcriptional repressor TCF25 TPR_3 PF07720.7 gi|452211382|ref|YP_007491496.1| - 0.00036 20.2 3.6 14 5.6 0.0 4.9 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_15 PF13429.1 gi|452211382|ref|YP_007491496.1| - 0.00092 18.3 3.7 0.14 11.2 0.6 4.0 4 1 0 4 4 4 1 Tetratricopeptide repeat HHH_8 PF14716.1 gi|452211382|ref|YP_007491496.1| - 0.0037 17.4 3.5 8.5 6.6 0.0 4.9 6 0 0 6 6 5 0 Helix-hairpin-helix domain DUF4404 PF14357.1 gi|452211382|ref|YP_007491496.1| - 0.0058 17.0 0.1 40 4.7 0.0 4.4 4 1 0 4 4 4 0 Domain of unknown function (DUF4404) Vps39_1 PF10366.4 gi|452211382|ref|YP_007491496.1| - 0.0082 16.1 7.2 0.48 10.4 0.1 4.6 3 1 2 5 5 5 1 Vacuolar sorting protein 39 domain 1 TPR_21 PF09976.4 gi|452211382|ref|YP_007491496.1| - 0.016 15.1 1.1 0.91 9.4 0.3 3.3 3 1 1 4 4 3 0 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452211382|ref|YP_007491496.1| - 0.025 14.6 0.7 13 5.9 0.0 3.6 3 1 0 4 4 2 0 Tetratricopeptide repeat RecO_C PF02565.10 gi|452211382|ref|YP_007491496.1| - 0.029 14.2 0.2 0.12 12.2 0.1 2.3 1 1 0 1 1 1 0 Recombination protein O C terminal PPR_3 PF13812.1 gi|452211382|ref|YP_007491496.1| - 0.068 13.4 0.5 17 5.9 0.0 4.1 4 0 0 4 4 3 0 Pentatricopeptide repeat domain Sec5 PF15469.1 gi|452211382|ref|YP_007491496.1| - 0.12 12.1 1.8 9.4 5.9 0.0 3.8 2 1 1 4 4 4 0 Exocyst complex component Sec5 HDOD PF08668.7 gi|452211382|ref|YP_007491496.1| - 0.14 11.3 0.4 1.1 8.4 0.1 2.5 3 1 1 4 4 4 0 HDOD domain Response_reg PF00072.19 gi|452211384|ref|YP_007491498.1| - 3.6e-29 101.0 0.1 4e-29 100.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|452211385|ref|YP_007491499.1| - 2.2e-37 127.5 2.2 7.4e-18 64.5 0.5 2.5 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.21 gi|452211385|ref|YP_007491499.1| - 4.9e-31 106.7 0.2 1e-30 105.6 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452211385|ref|YP_007491499.1| - 8.2e-19 67.3 0.1 2.7e-18 65.7 0.0 2.0 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.1 gi|452211385|ref|YP_007491499.1| - 5.9e-10 39.4 0.0 8.7e-05 22.8 0.0 2.9 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.1 gi|452211385|ref|YP_007491499.1| - 5.4e-09 35.6 0.0 0.00011 21.9 0.0 2.9 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|452211385|ref|YP_007491499.1| - 1.8e-05 24.4 0.0 0.018 14.8 0.0 3.1 2 1 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|452211385|ref|YP_007491499.1| - 0.00064 19.6 0.0 1.7 8.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|452211385|ref|YP_007491499.1| - 0.00093 19.2 0.0 0.018 15.1 0.0 2.8 3 0 0 3 3 3 1 PAS fold HATPase_c_3 PF13589.1 gi|452211385|ref|YP_007491499.1| - 0.03 13.9 0.0 0.062 12.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|452211385|ref|YP_007491499.1| - 0.19 11.7 0.0 0.51 10.3 0.0 1.8 2 0 0 2 2 2 0 PAS fold TaqI_C PF12950.2 gi|452211386|ref|YP_007491500.1| - 2.7e-05 23.8 0.7 6.9e-05 22.5 0.5 1.7 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain DUF72 PF01904.13 gi|452211387|ref|YP_007491501.1| - 8.9e-29 100.8 0.1 6.1e-24 85.0 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF72 SmpA_OmlA PF04355.8 gi|452211387|ref|YP_007491501.1| - 1.1 8.9 3.6 0.51 10.0 0.3 2.0 2 0 0 2 2 2 0 SmpA / OmlA family Peptidase_M23 PF01551.17 gi|452211390|ref|YP_007491504.1| - 2.7e-24 85.0 0.0 4.1e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M23 HhH-GPD PF00730.20 gi|452211392|ref|YP_007491506.1| - 2.6e-16 59.8 0.0 3.7e-16 59.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|452211392|ref|YP_007491506.1| - 2.7e-06 26.7 0.0 6.9e-06 25.4 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|452211392|ref|YP_007491506.1| - 0.008 16.3 0.0 0.018 15.2 0.0 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix domain RanGAP1_C PF07834.6 gi|452211392|ref|YP_007491506.1| - 0.036 13.5 0.0 0.067 12.6 0.0 1.4 1 0 0 1 1 1 0 RanGAP1 C-terminal domain HHH_2 PF12826.2 gi|452211392|ref|YP_007491506.1| - 0.09 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif PsiE PF06146.7 gi|452211394|ref|YP_007491508.1| - 1.8e-10 40.8 5.6 1.8e-10 40.8 3.9 1.9 2 0 0 2 2 2 1 Phosphate-starvation-inducible E Phage_Coat_Gp8 PF05371.7 gi|452211394|ref|YP_007491508.1| - 0.23 11.0 1.0 0.79 9.3 0.2 2.2 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF4245 PF14030.1 gi|452211394|ref|YP_007491508.1| - 0.46 10.2 2.3 1 9.1 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF4245) YlaC PF10777.4 gi|452211394|ref|YP_007491508.1| - 5.8 6.4 8.8 1 8.9 0.6 2.1 1 1 1 2 2 2 0 Inner membrane protein YlaC MacB_PCD PF12704.2 gi|452211396|ref|YP_007491510.1| - 4e-49 167.3 0.3 4e-49 167.3 0.2 3.2 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452211396|ref|YP_007491510.1| - 1.8e-19 69.6 15.9 7.3e-19 67.7 9.1 2.2 2 0 0 2 2 2 1 FtsX-like permease family K1 PF02960.9 gi|452211396|ref|YP_007491510.1| - 0.077 13.0 0.5 0.44 10.5 0.6 2.1 2 0 0 2 2 2 0 K1 glycoprotein NPCBM_assoc PF10633.4 gi|452211397|ref|YP_007491511.1| - 5e-10 39.2 0.0 0.0011 18.9 0.0 4.6 4 1 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|452211397|ref|YP_007491511.1| - 3.2e-09 36.7 5.8 0.024 14.7 0.2 4.2 2 1 2 4 4 4 3 CARDB DUF11 PF01345.13 gi|452211397|ref|YP_007491511.1| - 3.2e-07 30.3 0.2 0.055 13.5 0.1 3.6 3 0 0 3 3 3 2 Domain of unknown function DUF11 Y_Y_Y PF07495.8 gi|452211397|ref|YP_007491511.1| - 0.013 15.2 3.1 11 5.9 0.0 4.1 3 1 1 4 4 4 0 Y_Y_Y domain DUF2393 PF09624.5 gi|452211397|ref|YP_007491511.1| - 0.016 14.7 4.5 0.47 9.9 0.0 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF2393) A2M_N PF01835.14 gi|452211397|ref|YP_007491511.1| - 0.11 12.7 0.1 2.5 8.4 0.0 2.8 3 0 0 3 3 3 0 MG2 domain ABC_tran PF00005.22 gi|452211398|ref|YP_007491512.1| - 7.8e-32 110.4 0.2 1.4e-31 109.6 0.0 1.4 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|452211398|ref|YP_007491512.1| - 1.3e-08 35.1 0.1 0.00097 19.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452211398|ref|YP_007491512.1| - 1.1e-05 24.7 1.1 0.00031 20.0 0.8 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|452211398|ref|YP_007491512.1| - 2.3e-05 23.9 0.1 0.0056 16.1 0.0 2.2 2 0 0 2 2 2 2 AAA-like domain AAA_16 PF13191.1 gi|452211398|ref|YP_007491512.1| - 6.7e-05 22.9 0.3 0.00017 21.6 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|452211398|ref|YP_007491512.1| - 0.00017 21.0 0.2 0.00039 19.9 0.1 1.7 1 1 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|452211398|ref|YP_007491512.1| - 0.00029 20.3 0.1 0.019 14.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|452211398|ref|YP_007491512.1| - 0.0011 18.1 0.1 0.0033 16.6 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|452211398|ref|YP_007491512.1| - 0.0019 17.3 0.0 1.1 8.1 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|452211398|ref|YP_007491512.1| - 0.0027 17.8 1.2 0.065 13.3 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|452211398|ref|YP_007491512.1| - 0.0036 18.1 0.2 0.0057 17.4 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|452211398|ref|YP_007491512.1| - 0.013 15.8 0.1 0.045 14.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|452211398|ref|YP_007491512.1| - 0.014 14.9 0.2 0.041 13.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|452211398|ref|YP_007491512.1| - 0.082 13.2 1.2 0.48 10.7 0.8 2.1 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|452211398|ref|YP_007491512.1| - 0.1 11.0 0.0 1.6 7.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|452211398|ref|YP_007491512.1| - 0.11 12.4 0.3 0.21 11.5 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATP-synt_ab PF00006.20 gi|452211398|ref|YP_007491512.1| - 0.16 11.4 0.2 7.8 5.9 0.1 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain HTH_3 PF01381.17 gi|452211399|ref|YP_007491513.1| - 9.6e-14 50.9 0.0 1.1e-13 50.8 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|452211399|ref|YP_007491513.1| - 3e-10 40.1 0.0 3.6e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|452211399|ref|YP_007491513.1| - 3.4e-09 36.6 0.0 3.7e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452211399|ref|YP_007491513.1| - 9.5e-07 28.9 0.0 1.1e-06 28.7 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|452211399|ref|YP_007491513.1| - 0.0049 16.6 0.0 0.0055 16.4 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|452211399|ref|YP_007491513.1| - 0.007 16.1 0.1 0.013 15.2 0.0 1.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_25 PF13413.1 gi|452211399|ref|YP_007491513.1| - 0.022 14.3 0.0 0.041 13.5 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain MRF_C1 PF13887.1 gi|452211399|ref|YP_007491513.1| - 0.037 13.0 0.1 0.079 12.0 0.1 1.5 1 0 0 1 1 1 0 Myelin gene regulatory factor -C-terminal domain 1 7TMR-DISM_7TM PF07695.6 gi|452211400|ref|YP_007491514.1| - 0.019 14.6 13.6 0.022 14.4 0.4 2.1 2 0 0 2 2 2 0 7TM diverse intracellular signalling IncA PF04156.9 gi|452211400|ref|YP_007491514.1| - 0.021 14.4 1.4 0.021 14.4 1.0 1.6 2 0 0 2 2 2 0 IncA protein PIG-Y PF15159.1 gi|452211400|ref|YP_007491514.1| - 0.048 13.8 0.6 0.048 13.8 0.4 2.6 2 1 1 3 3 3 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF423 PF04241.10 gi|452211400|ref|YP_007491514.1| - 0.071 13.0 5.7 0.21 11.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF423) DUF4271 PF14093.1 gi|452211400|ref|YP_007491514.1| - 0.094 12.3 17.8 0.11 12.1 2.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) AgrB PF04647.10 gi|452211400|ref|YP_007491514.1| - 0.16 11.0 6.9 0.24 10.4 4.8 1.3 1 1 0 1 1 1 0 Accessory gene regulator B EcsB PF05975.7 gi|452211400|ref|YP_007491514.1| - 0.27 9.6 14.0 1.5 7.1 9.8 1.7 1 1 0 1 1 1 0 Bacterial ABC transporter protein EcsB SdpI PF13630.1 gi|452211400|ref|YP_007491514.1| - 0.48 10.1 16.7 0.039 13.6 3.7 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Polysacc_synt PF01943.12 gi|452211400|ref|YP_007491514.1| - 1.5 7.9 17.1 0.17 11.1 3.1 2.0 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein ABC2_membrane_5 PF13346.1 gi|452211400|ref|YP_007491514.1| - 1.7 7.8 17.8 0.043 13.1 2.7 2.1 1 1 1 2 2 2 0 ABC-2 family transporter protein DUF872 PF05915.7 gi|452211400|ref|YP_007491514.1| - 1.8 8.4 7.3 0.14 12.0 1.6 1.7 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF1212 PF06738.7 gi|452211400|ref|YP_007491514.1| - 2 7.8 9.0 0.14 11.5 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1212) PhaG_MnhG_YufB PF03334.9 gi|452211400|ref|YP_007491514.1| - 2.2 8.3 11.5 0.44 10.6 3.3 2.2 1 1 1 2 2 2 0 Na+/H+ antiporter subunit DUF3671 PF12420.3 gi|452211400|ref|YP_007491514.1| - 2.6 8.0 11.4 19 5.2 7.9 2.2 1 1 0 1 1 1 0 Protein of unknown function DUF2306 PF10067.4 gi|452211400|ref|YP_007491514.1| - 2.6 8.2 8.2 1.2 9.3 2.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2306) DUF373 PF04123.8 gi|452211400|ref|YP_007491514.1| - 3.5 6.5 10.4 6 5.7 7.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) DUF4190 PF13828.1 gi|452211400|ref|YP_007491514.1| - 7.5 6.1 8.7 2.9 7.4 2.8 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) DUF4181 PF13789.1 gi|452211400|ref|YP_007491514.1| - 9.3 6.2 14.4 1.1 9.2 4.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) Exosortase_EpsH PF09721.5 gi|452211400|ref|YP_007491514.1| - 9.5 5.3 16.1 0.48 9.6 1.1 2.0 1 1 1 2 2 2 0 Transmembrane exosortase (Exosortase_EpsH) Pirin_C PF05726.8 gi|452211401|ref|YP_007491515.1| - 1.3e-38 131.2 0.0 2.7e-37 126.9 0.0 2.1 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin PF02678.11 gi|452211401|ref|YP_007491515.1| - 2e-37 127.3 0.2 3.2e-37 126.6 0.1 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.6 gi|452211401|ref|YP_007491515.1| - 1.3e-05 24.5 4.3 0.0099 15.3 0.2 3.5 2 1 1 3 3 3 2 Cupin domain AraC_binding PF02311.14 gi|452211401|ref|YP_007491515.1| - 0.018 14.7 2.1 3.4 7.3 0.1 3.0 2 1 0 2 2 2 0 AraC-like ligand binding domain DDE_Tnp_1 PF01609.16 gi|452211402|ref|YP_007491516.1| - 7e-08 32.2 1.3 1.1e-07 31.6 0.9 1.2 1 0 0 1 1 1 1 Transposase DDE domain YqzH PF14164.1 gi|452211402|ref|YP_007491516.1| - 0.012 15.5 0.0 5.1 7.0 0.0 2.8 2 0 0 2 2 2 0 YqzH-like protein DDE_Tnp_1_6 PF13751.1 gi|452211402|ref|YP_007491516.1| - 0.025 14.5 0.2 0.046 13.7 0.1 1.4 1 0 0 1 1 1 0 Transposase DDE domain PcfK PF14058.1 gi|452211402|ref|YP_007491516.1| - 0.056 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 PcfK-like protein PepSY_2 PF13670.1 gi|452211404|ref|YP_007491518.1| - 0.02 14.7 0.2 0.051 13.4 0.1 1.6 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain HMG_box PF00505.14 gi|452211404|ref|YP_007491518.1| - 0.15 12.3 0.9 7.4 6.9 0.3 2.6 2 0 0 2 2 2 0 HMG (high mobility group) box DDE_3 PF13358.1 gi|452211405|ref|YP_007491519.1| - 1.2e-18 67.2 0.0 1.8e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease Pirin_C PF05726.8 gi|452211406|ref|YP_007491520.1| - 1.4e-38 131.0 0.0 5e-37 126.1 0.0 2.3 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin PF02678.11 gi|452211406|ref|YP_007491520.1| - 6.5e-37 125.6 0.2 9.9e-37 125.0 0.1 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.6 gi|452211406|ref|YP_007491520.1| - 0.0012 18.3 3.0 0.025 14.0 0.1 3.1 3 0 0 3 3 3 1 Cupin domain RNA_POL_M_15KD PF02150.11 gi|452211408|ref|YP_007491522.1| - 2.8e-05 23.6 0.6 3.2e-05 23.4 0.4 1.1 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|452211408|ref|YP_007491522.1| - 0.0012 18.6 0.8 0.0015 18.3 0.6 1.1 1 0 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.7 gi|452211408|ref|YP_007491522.1| - 0.0025 17.5 0.6 0.0029 17.3 0.5 1.1 1 0 0 1 1 1 1 zinc-ribbons DNA_ligase_ZBD PF03119.11 gi|452211408|ref|YP_007491522.1| - 0.025 14.2 0.0 0.035 13.8 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain RecR PF02132.10 gi|452211408|ref|YP_007491522.1| - 0.03 13.7 0.9 2.1 7.8 0.0 2.1 2 0 0 2 2 2 0 RecR protein Cys_rich_CPCC PF14206.1 gi|452211408|ref|YP_007491522.1| - 0.031 13.8 0.6 0.031 13.8 0.4 1.1 1 0 0 1 1 1 0 Cysteine-rich CPCC ADK_lid PF05191.9 gi|452211408|ref|YP_007491522.1| - 0.032 13.8 1.2 0.34 10.6 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-TFIIB PF13453.1 gi|452211408|ref|YP_007491522.1| - 0.049 12.8 3.0 0.091 11.9 2.1 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger OrfB_Zn_ribbon PF07282.6 gi|452211408|ref|YP_007491522.1| - 0.063 12.9 0.9 0.076 12.6 0.6 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-C3HC4_3 PF13920.1 gi|452211408|ref|YP_007491522.1| - 0.11 12.1 1.1 0.15 11.7 0.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Auto_anti-p27 PF06677.7 gi|452211408|ref|YP_007491522.1| - 0.29 10.9 2.1 0.38 10.5 1.5 1.2 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C4_Topoisom PF01396.14 gi|452211408|ref|YP_007491522.1| - 0.33 10.4 3.4 0.76 9.3 2.4 1.6 1 1 1 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-HIT PF04438.11 gi|452211408|ref|YP_007491522.1| - 0.59 9.8 3.5 11 5.7 2.9 2.0 1 1 1 2 2 2 0 HIT zinc finger DUF2121 PF09894.4 gi|452211410|ref|YP_007491524.1| - 1.9e-78 262.2 5.8 2.1e-78 262.0 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) Proteasome PF00227.21 gi|452211410|ref|YP_007491524.1| - 0.0017 17.6 0.1 0.15 11.3 0.0 2.5 2 0 0 2 2 2 2 Proteasome subunit Adenine_deam_C PF13382.1 gi|452211411|ref|YP_007491525.1| - 1.4e-59 200.0 0.0 2.3e-59 199.3 0.0 1.3 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|452211411|ref|YP_007491525.1| - 1.5e-27 97.1 0.0 2.2e-26 93.3 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|452211411|ref|YP_007491525.1| - 3.6e-11 43.6 0.0 0.00018 21.6 0.0 2.3 1 1 1 2 2 2 2 Amidohydrolase Amidohydro_5 PF13594.1 gi|452211411|ref|YP_007491525.1| - 6.1e-08 32.3 0.3 1.8e-07 30.8 0.2 1.8 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|452211411|ref|YP_007491525.1| - 0.026 13.7 0.0 4.7 6.3 0.0 2.2 2 0 0 2 2 2 0 Amidohydrolase family Aminotran_5 PF00266.14 gi|452211412|ref|YP_007491526.1| - 7e-08 31.6 0.0 7.5e-08 31.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V HNH_3 PF13392.1 gi|452211412|ref|YP_007491526.1| - 0.0048 16.2 0.0 0.056 12.8 0.0 2.2 2 0 0 2 2 2 1 HNH endonuclease SCRG1 PF15224.1 gi|452211413|ref|YP_007491527.1| - 0.029 14.1 0.6 0.037 13.8 0.4 1.3 1 1 0 1 1 1 0 Scrapie-responsive protein 1 Hydantoinase_B PF02538.9 gi|452211414|ref|YP_007491528.1| - 5e-207 688.3 0.0 7.2e-207 687.7 0.0 1.1 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydant_A_N PF05378.8 gi|452211414|ref|YP_007491528.1| - 2.4e-61 206.3 0.0 1.1e-60 204.1 0.0 2.1 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.13 gi|452211414|ref|YP_007491528.1| - 8.1e-50 169.5 0.2 8.7e-40 136.6 0.1 3.0 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase DUF1297 PF06973.7 gi|452211415|ref|YP_007491529.1| - 2.5e-60 203.0 0.0 3.3e-60 202.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|452211415|ref|YP_007491529.1| - 5.5e-42 142.4 0.0 1.1e-41 141.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.12 gi|452211415|ref|YP_007491529.1| - 0.039 13.2 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 gi|452211415|ref|YP_007491529.1| - 0.043 13.5 0.0 9.8 5.8 0.0 2.3 2 0 0 2 2 2 0 ATP-grasp domain Big_5 PF13205.1 gi|452211416|ref|YP_007491530.1| - 1.3e-05 25.7 0.0 1.8e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain HDOD PF08668.7 gi|452211417|ref|YP_007491531.1| - 0.00097 18.4 0.1 0.27 10.4 0.0 2.2 1 1 1 2 2 2 2 HDOD domain DUF1279 PF06916.8 gi|452211417|ref|YP_007491531.1| - 0.03 14.6 3.7 1 9.6 0.1 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF1279) YopD PF05844.7 gi|452211417|ref|YP_007491531.1| - 0.053 12.5 0.1 0.084 11.8 0.1 1.3 1 0 0 1 1 1 0 YopD protein DUF3042 PF11240.3 gi|452211417|ref|YP_007491531.1| - 0.18 11.6 2.3 0.47 10.2 1.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) COX14 PF14880.1 gi|452211417|ref|YP_007491531.1| - 0.24 11.0 2.7 0.18 11.4 0.3 1.9 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Flavin_Reduct PF01613.13 gi|452211418|ref|YP_007491532.1| - 1e-28 100.1 0.0 1.2e-28 99.8 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Aldo_ket_red PF00248.16 gi|452211420|ref|YP_007491534.1| - 3.6e-44 150.6 0.0 4.9e-44 150.2 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|452211420|ref|YP_007491534.1| - 8.9e-13 48.3 7.6 1.8e-12 47.3 5.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211420|ref|YP_007491534.1| - 2.1e-09 37.5 9.6 3.8e-09 36.6 6.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211420|ref|YP_007491534.1| - 1.5e-08 34.9 2.4 0.00025 21.3 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452211420|ref|YP_007491534.1| - 2e-07 30.9 7.2 3.5e-07 30.1 5.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|452211420|ref|YP_007491534.1| - 5.9e-07 29.1 1.9 1.5e-05 24.5 0.1 2.3 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_10 PF13237.1 gi|452211420|ref|YP_007491534.1| - 1.2e-05 25.0 8.2 3.8e-05 23.3 5.8 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211420|ref|YP_007491534.1| - 8.9e-05 23.1 4.1 0.025 15.3 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452211420|ref|YP_007491534.1| - 0.00013 21.7 6.1 0.072 12.9 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452211420|ref|YP_007491534.1| - 0.0005 19.5 11.1 0.00098 18.6 2.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211420|ref|YP_007491534.1| - 0.035 13.9 1.7 0.035 13.9 1.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452211420|ref|YP_007491534.1| - 0.078 13.3 16.1 0.25 11.7 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain PA_decarbox PF05870.6 gi|452211420|ref|YP_007491534.1| - 0.1 12.0 0.1 12 5.3 0.0 2.5 3 0 0 3 3 3 0 Phenolic acid decarboxylase (PAD) Dynein_light PF01221.13 gi|452211420|ref|YP_007491534.1| - 0.11 12.5 0.2 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Dynein light chain type 1 Fer4_7 PF12838.2 gi|452211420|ref|YP_007491534.1| - 0.23 11.8 15.3 0.37 11.2 3.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211420|ref|YP_007491534.1| - 0.39 10.7 16.0 0.15 12.0 2.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452211420|ref|YP_007491534.1| - 1.5 9.6 15.7 0.11 13.1 3.2 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211420|ref|YP_007491534.1| - 2 9.0 7.0 2 9.0 0.6 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Aldo_ket_red PF00248.16 gi|452211421|ref|YP_007491535.1| - 3.4e-45 154.0 0.0 4.7e-45 153.5 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|452211421|ref|YP_007491535.1| - 1.1e-12 48.0 8.1 2.3e-12 47.0 5.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211421|ref|YP_007491535.1| - 1.2e-06 28.6 8.2 2.2e-06 27.8 5.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452211421|ref|YP_007491535.1| - 5.3e-06 26.3 7.4 1.1e-05 25.3 5.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211421|ref|YP_007491535.1| - 7.5e-05 23.0 2.9 0.028 14.8 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|452211421|ref|YP_007491535.1| - 0.00022 20.8 0.2 0.00022 20.8 0.1 1.9 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.1 gi|452211421|ref|YP_007491535.1| - 0.0027 18.3 5.0 0.065 13.9 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452211421|ref|YP_007491535.1| - 0.0053 16.5 7.3 0.65 9.8 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452211421|ref|YP_007491535.1| - 0.0056 16.2 9.9 0.01 15.3 1.3 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211421|ref|YP_007491535.1| - 0.0085 15.8 12.8 0.015 15.0 1.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211421|ref|YP_007491535.1| - 0.28 11.6 14.1 0.45 10.9 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452211421|ref|YP_007491535.1| - 0.32 11.0 14.1 0.13 12.2 2.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Med27 PF11571.3 gi|452211421|ref|YP_007491535.1| - 0.8 9.8 4.3 0.44 10.7 0.1 2.2 2 0 0 2 2 2 0 Mediator complex subunit 27 Fer4_7 PF12838.2 gi|452211421|ref|YP_007491535.1| - 0.85 10.0 13.0 0.54 10.6 2.3 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452211421|ref|YP_007491535.1| - 1 10.0 4.8 2.6 8.6 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain U79_P34 PF03064.11 gi|452211422|ref|YP_007491536.1| - 0.12 11.8 5.9 0.12 11.8 4.1 1.0 1 0 0 1 1 1 0 HSV U79 / HCMV P34 SR-25 PF10500.4 gi|452211422|ref|YP_007491536.1| - 0.18 11.2 9.7 0.21 11.0 6.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein BLVR PF06375.6 gi|452211422|ref|YP_007491536.1| - 3.8 7.3 10.7 4.8 7.0 7.4 1.1 1 0 0 1 1 1 0 Bovine leukaemia virus receptor (BLVR) Med19 PF10278.4 gi|452211422|ref|YP_007491536.1| - 6.4 6.4 10.9 7.3 6.2 7.6 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CMD PF02627.15 gi|452211423|ref|YP_007491537.1| - 1e-13 50.9 0.0 1.2e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Acetyltransf_3 PF13302.1 gi|452211424|ref|YP_007491538.1| - 2.7e-21 76.2 0.0 3.3e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452211424|ref|YP_007491538.1| - 2e-08 34.1 0.0 2.7e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452211424|ref|YP_007491538.1| - 0.0019 18.2 0.0 0.0032 17.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|452211424|ref|YP_007491538.1| - 0.022 14.6 0.0 0.027 14.3 0.0 1.2 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Cbl_N3 PF02762.9 gi|452211424|ref|YP_007491538.1| - 0.041 13.5 0.0 0.074 12.6 0.0 1.4 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain FR47 PF08445.5 gi|452211424|ref|YP_007491538.1| - 0.051 13.3 0.0 0.093 12.4 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein PGG PF13962.1 gi|452211426|ref|YP_007491540.1| - 0.3 10.7 2.0 0.47 10.0 1.4 1.5 1 0 0 1 1 1 0 Domain of unknown function Lactonase PF10282.4 gi|452211427|ref|YP_007491541.1| - 6.3e-13 48.5 4.5 8.8e-07 28.3 0.3 3.9 1 1 1 3 3 3 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452211427|ref|YP_007491541.1| - 5.8e-11 41.3 7.1 0.00013 20.4 0.6 3.4 2 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.16 gi|452211427|ref|YP_007491541.1| - 1.3e-07 31.1 13.6 1.7 8.7 0.0 7.2 7 0 0 7 7 7 4 NHL repeat PD40 PF07676.7 gi|452211427|ref|YP_007491541.1| - 2.2e-07 30.4 15.9 1.4 8.6 0.0 9.5 9 0 0 9 9 9 3 WD40-like Beta Propeller Repeat SBP56 PF05694.6 gi|452211427|ref|YP_007491541.1| - 1.2e-06 27.2 0.5 0.57 8.6 0.0 5.0 1 1 3 4 4 4 3 56kDa selenium binding protein (SBP56) Arylesterase PF01731.15 gi|452211427|ref|YP_007491541.1| - 6.7e-05 22.7 7.4 20 5.2 0.0 5.9 5 1 1 6 6 6 1 Arylesterase DUF1513 PF07433.6 gi|452211427|ref|YP_007491541.1| - 0.47 9.3 1.6 2.3 7.0 0.1 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1513) DUF3785 PF12653.2 gi|452211428|ref|YP_007491542.1| - 0.4 10.5 2.4 0.38 10.6 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3785) Virul_fac_BrkB PF03631.10 gi|452211429|ref|YP_007491543.1| - 2.1e-51 174.8 19.7 2.3e-51 174.6 13.7 1.0 1 0 0 1 1 1 1 Virulence factor BrkB DUF456 PF04306.8 gi|452211429|ref|YP_007491543.1| - 0.016 15.2 1.5 0.016 15.2 1.0 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF456) Polysacc_synt PF01943.12 gi|452211432|ref|YP_007491546.1| - 2.9e-33 115.3 39.0 4.1e-33 114.8 15.7 2.5 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|452211432|ref|YP_007491546.1| - 2.3e-17 63.1 40.4 8.4e-17 61.3 8.6 3.7 3 1 0 3 3 3 3 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|452211432|ref|YP_007491546.1| - 9.4e-16 58.0 17.9 9.4e-16 58.0 12.4 3.1 3 0 0 3 3 3 1 Polysaccharide biosynthesis protein MatE PF01554.13 gi|452211432|ref|YP_007491546.1| - 4.2e-13 49.2 32.1 2.2e-09 37.1 9.1 3.0 3 0 0 3 3 3 2 MatE MVIN PF03023.9 gi|452211432|ref|YP_007491546.1| - 7.7e-06 24.5 31.0 1.4e-05 23.7 21.5 1.3 1 0 0 1 1 1 1 MviN-like protein zf-ribbon_3 PF13248.1 gi|452211436|ref|YP_007491550.1| - 1.2e-11 43.3 28.0 2.4e-07 29.7 2.3 3.4 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.2 gi|452211436|ref|YP_007491550.1| - 4.7e-10 39.1 12.4 4.7e-10 39.1 8.6 3.4 2 1 2 4 4 4 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452211436|ref|YP_007491550.1| - 1.8e-08 33.6 31.8 9.7e-07 28.0 3.8 4.5 4 1 1 5 5 5 3 zinc-ribbon domain UPF0547 PF10571.4 gi|452211436|ref|YP_007491550.1| - 2.3e-05 23.9 1.5 2.3e-05 23.9 1.1 4.6 4 1 0 4 4 4 2 Uncharacterised protein family UPF0547 zf-NADH-PPase PF09297.6 gi|452211436|ref|YP_007491550.1| - 0.0037 16.7 21.6 0.26 10.8 0.2 5.5 4 1 0 4 4 4 2 NADH pyrophosphatase zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|452211436|ref|YP_007491550.1| - 0.037 13.8 18.2 2.2 8.1 1.0 4.0 3 1 0 3 3 3 0 zinc-ribbons Ribosomal_L32p PF01783.18 gi|452211436|ref|YP_007491550.1| - 0.37 11.0 12.8 1.2 9.4 0.7 3.5 2 1 1 3 3 3 0 Ribosomal L32p protein family PolC_DP2 PF03833.8 gi|452211436|ref|YP_007491550.1| - 0.4 8.2 12.1 0.019 12.6 4.1 1.7 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 NRDD PF13597.1 gi|452211436|ref|YP_007491550.1| - 0.94 7.4 5.9 10 4.0 4.1 2.2 1 1 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase tRNA-synt_1g PF09334.6 gi|452211436|ref|YP_007491550.1| - 1.8 7.1 4.1 0.69 8.5 0.7 1.8 1 1 0 1 1 1 0 tRNA synthetases class I (M) DUF1015 PF06245.6 gi|452211437|ref|YP_007491551.1| - 6.5e-63 212.6 0.0 9.2e-63 212.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) zf-ribbon_3 PF13248.1 gi|452211437|ref|YP_007491551.1| - 5.8e-10 38.0 34.6 0.00087 18.4 2.2 4.8 5 0 0 5 5 5 4 zinc-ribbon domain DZR PF12773.2 gi|452211437|ref|YP_007491551.1| - 8.8e-09 35.0 30.2 3.9e-06 26.5 6.5 3.6 1 1 3 4 4 4 4 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452211437|ref|YP_007491551.1| - 1.5e-07 30.7 38.1 0.0069 15.8 2.3 5.5 4 1 0 4 4 4 4 zinc-ribbon domain Churchill PF06573.6 gi|452211437|ref|YP_007491551.1| - 0.013 15.4 1.3 0.03 14.3 0.1 2.1 1 1 1 2 2 2 0 Churchill protein Rhodanese PF00581.15 gi|452211438|ref|YP_007491552.1| - 9.7e-28 96.7 0.1 3.3e-20 72.5 0.1 2.6 2 0 0 2 2 2 2 Rhodanese-like domain Lactamase_B PF00753.22 gi|452211438|ref|YP_007491552.1| - 2.3e-07 30.6 0.4 6.6e-07 29.1 0.1 1.9 3 0 0 3 3 3 1 Metallo-beta-lactamase superfamily DUF45 PF01863.12 gi|452211440|ref|YP_007491554.1| - 0.015 15.0 0.3 0.023 14.4 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF45 WLM PF08325.5 gi|452211440|ref|YP_007491554.1| - 0.035 13.9 0.1 0.066 13.0 0.0 1.5 1 0 0 1 1 1 0 WLM domain NPCBM_assoc PF10633.4 gi|452211441|ref|YP_007491555.1| - 2.2e-13 50.0 0.6 0.00018 21.4 0.1 5.3 5 2 0 5 5 5 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF1034 PF06280.7 gi|452211441|ref|YP_007491555.1| - 4.7e-12 46.3 5.1 0.00017 21.9 0.4 4.6 3 2 0 3 3 3 2 Fn3-like domain (DUF1034) DUF916 PF06030.7 gi|452211441|ref|YP_007491555.1| - 5.5e-12 45.5 0.4 0.17 11.7 0.0 5.4 5 0 0 5 5 5 4 Bacterial protein of unknown function (DUF916) FixG_C PF11614.3 gi|452211441|ref|YP_007491555.1| - 7.6e-10 38.9 0.8 0.015 15.4 0.0 3.8 3 1 0 3 3 3 3 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4625 PF15418.1 gi|452211441|ref|YP_007491555.1| - 6.6e-06 26.2 2.1 0.025 14.6 0.0 3.6 3 0 0 3 3 3 2 Domain of unknown function (DUF4625) DUF11 PF01345.13 gi|452211441|ref|YP_007491555.1| - 0.00013 21.9 3.4 2 8.5 0.0 4.1 5 0 0 5 5 5 2 Domain of unknown function DUF11 BACON PF13004.2 gi|452211441|ref|YP_007491555.1| - 0.0045 17.1 4.0 1.7 8.9 0.2 4.1 4 0 0 4 4 3 1 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal Big_2 PF02368.13 gi|452211441|ref|YP_007491555.1| - 0.0057 16.5 0.0 3.5 7.5 0.0 3.7 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 2) Imm48 PF15587.1 gi|452211441|ref|YP_007491555.1| - 0.036 13.4 0.1 3.3 7.0 0.0 3.2 3 0 0 3 3 3 0 Immunity protein 48 Gmad2 PF10648.4 gi|452211441|ref|YP_007491555.1| - 0.041 14.0 0.3 17 5.6 0.0 3.2 3 0 0 3 3 3 0 Immunoglobulin-like domain of bacterial spore germination TRAP_alpha PF03896.11 gi|452211441|ref|YP_007491555.1| - 0.046 12.7 0.7 0.28 10.1 0.0 2.2 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit Transglut_N PF00868.15 gi|452211441|ref|YP_007491555.1| - 0.18 11.8 0.0 6.7 6.7 0.0 3.4 3 1 0 3 3 3 0 Transglutaminase family BsuPI PF12690.2 gi|452211441|ref|YP_007491555.1| - 0.24 11.1 1.9 1.3e+02 2.4 0.0 5.0 6 0 0 6 6 6 0 Intracellular proteinase inhibitor HTH_38 PF13936.1 gi|452211443|ref|YP_007491557.1| - 0.00022 20.7 0.8 0.00051 19.5 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.8 gi|452211443|ref|YP_007491557.1| - 0.001 18.5 7.7 0.001 18.5 5.4 1.9 2 1 0 2 2 2 1 InsA N-terminal domain HCaRG PF07258.9 gi|452211443|ref|YP_007491557.1| - 0.0018 17.8 0.4 0.0022 17.5 0.3 1.3 1 0 0 1 1 1 1 HCaRG protein zf-BED PF02892.10 gi|452211443|ref|YP_007491557.1| - 0.01 15.6 1.6 0.026 14.3 1.1 1.7 1 0 0 1 1 1 1 BED zinc finger IBR PF01485.16 gi|452211443|ref|YP_007491557.1| - 0.016 15.0 1.8 0.043 13.6 1.3 1.8 1 1 0 1 1 1 0 IBR domain Thioredoxin_4 PF13462.1 gi|452211443|ref|YP_007491557.1| - 0.047 13.6 0.1 0.063 13.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin PyrI_C PF02748.10 gi|452211443|ref|YP_007491557.1| - 3.5 7.1 7.6 23 4.5 5.3 2.2 1 1 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain UPF0047 PF01894.12 gi|452211444|ref|YP_007491558.1| - 1.3e-32 112.0 0.0 1.5e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 PKD PF00801.15 gi|452211446|ref|YP_007491560.1| - 5.9e-53 176.5 28.5 2.9e-16 58.9 0.7 4.9 4 0 0 4 4 4 4 PKD domain Laminin_G_3 PF13385.1 gi|452211446|ref|YP_007491560.1| - 5.8e-14 52.6 4.0 6.1e-14 52.5 0.0 2.9 2 1 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily Polysacc_deac_1 PF01522.16 gi|452211446|ref|YP_007491560.1| - 1.8e-09 37.2 0.1 6e-09 35.5 0.0 1.9 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.4 gi|452211446|ref|YP_007491560.1| - 2.4e-07 30.4 0.5 5.3e-07 29.2 0.3 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Y_Y_Y PF07495.8 gi|452211446|ref|YP_007491560.1| - 0.13 12.0 13.2 0.47 10.2 0.3 4.5 5 0 0 5 5 5 0 Y_Y_Y domain Disaggr_assoc PF08480.5 gi|452211447|ref|YP_007491561.1| - 2.8e-82 274.9 10.4 2.8e-82 274.9 7.2 2.5 2 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|452211447|ref|YP_007491561.1| - 5.1e-08 32.8 61.2 1.5e-06 28.0 23.5 3.9 2 1 1 3 3 3 2 Right handed beta helix region Hexapep PF00132.19 gi|452211448|ref|YP_007491562.1| - 7.7e-08 31.5 18.2 5e-06 25.7 3.0 2.7 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452211448|ref|YP_007491562.1| - 0.00027 20.4 13.0 0.039 13.5 0.9 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Lactamase_B_2 PF12706.2 gi|452211450|ref|YP_007491564.1| - 8.4e-23 80.9 0.1 9.7e-23 80.7 0.0 1.0 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452211450|ref|YP_007491564.1| - 4.3e-08 33.0 4.5 2.5e-07 30.5 3.1 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|452211450|ref|YP_007491564.1| - 0.0061 16.2 0.0 0.0084 15.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.10 gi|452211450|ref|YP_007491564.1| - 0.041 12.8 0.2 0.085 11.7 0.0 1.6 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II MannoseP_isomer PF01050.13 gi|452211452|ref|YP_007491566.1| - 9.8e-33 112.9 0.8 9.8e-33 112.9 0.5 1.7 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase Glycos_transf_1 PF00534.15 gi|452211452|ref|YP_007491566.1| - 2.5e-22 79.0 0.1 4.5e-22 78.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452211452|ref|YP_007491566.1| - 2.2e-11 44.0 0.0 8.1e-11 42.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Cupin_2 PF07883.6 gi|452211452|ref|YP_007491566.1| - 2e-09 36.7 0.1 4.2e-09 35.7 0.1 1.6 1 0 0 1 1 1 1 Cupin domain Glyco_transf_4 PF13439.1 gi|452211452|ref|YP_007491566.1| - 2.1e-06 27.5 0.4 8.6e-06 25.5 0.1 2.3 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|452211452|ref|YP_007491566.1| - 1.3e-05 25.3 0.0 3.7e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|452211452|ref|YP_007491566.1| - 0.0075 16.4 0.1 0.023 14.8 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain DUF377 PF04041.8 gi|452211453|ref|YP_007491567.1| - 1.6e-62 211.0 0.0 2e-62 210.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF377) Glycos_transf_1 PF00534.15 gi|452211454|ref|YP_007491568.1| - 2.4e-15 56.4 0.1 6.2e-15 55.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|452211454|ref|YP_007491568.1| - 3.9e-13 49.7 0.0 1e-12 48.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|452211454|ref|YP_007491568.1| - 3.2e-05 23.7 0.0 8.7e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|452211454|ref|YP_007491568.1| - 0.0019 18.4 0.0 0.0058 16.8 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_hydro_88 PF07470.8 gi|452211454|ref|YP_007491568.1| - 0.0024 16.9 0.2 0.95 8.4 0.1 2.8 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.9 gi|452211454|ref|YP_007491568.1| - 0.0029 17.0 0.4 0.0058 16.0 0.1 1.6 1 1 1 2 2 2 1 Glycosyl hydrolase family 76 DUF1680 PF07944.7 gi|452211454|ref|YP_007491568.1| - 0.0076 14.5 0.9 0.85 7.8 0.2 2.5 2 1 0 2 2 2 2 Putative glycosyl hydrolase of unknown function (DUF1680) Urease_gamma PF00547.13 gi|452211454|ref|YP_007491568.1| - 0.047 13.7 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Urease, gamma subunit Disaggr_repeat PF06848.6 gi|452211457|ref|YP_007491571.1| - 2.5e-98 326.8 3.5 4.8e-98 325.9 2.4 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|452211457|ref|YP_007491571.1| - 1.9e-83 278.8 13.2 1.9e-83 278.8 9.1 3.6 2 1 1 3 3 3 2 Disaggregatase related Beta_helix PF13229.1 gi|452211457|ref|YP_007491571.1| - 8.5e-19 67.8 48.4 1.7e-13 50.6 15.7 3.8 1 1 2 3 3 3 3 Right handed beta helix region TGFb_propeptide PF00688.13 gi|452211457|ref|YP_007491571.1| - 0.032 13.5 0.0 0.22 10.7 0.0 2.0 2 0 0 2 2 2 0 TGF-beta propeptide Rapsyn_N PF10579.4 gi|452211457|ref|YP_007491571.1| - 0.06 13.1 0.0 1.5 8.6 0.0 2.6 3 0 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region Coat_X PF07552.6 gi|452211457|ref|YP_007491571.1| - 0.15 11.8 0.6 2.6 7.8 0.1 2.3 2 0 0 2 2 2 0 Spore Coat Protein X and V domain YqhG PF11079.3 gi|452211458|ref|YP_007491572.1| - 0.065 12.0 0.9 4.4 6.0 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein YqhG of unknown function DUF1699 PF08004.6 gi|452211459|ref|YP_007491573.1| - 4.4e-68 226.8 0.6 4.9e-68 226.6 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|452211459|ref|YP_007491573.1| - 0.055 13.7 0.1 0.14 12.3 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|452211459|ref|YP_007491573.1| - 0.084 12.4 0.2 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region NinB PF05772.7 gi|452211460|ref|YP_007491574.1| - 0.027 14.1 0.1 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 NinB protein TrmB PF01978.14 gi|452211460|ref|YP_007491574.1| - 0.041 13.6 0.0 0.24 11.1 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2551 PF10826.3 gi|452211461|ref|YP_007491575.1| - 4.2e-35 119.5 0.7 5e-35 119.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.11 gi|452211461|ref|YP_007491575.1| - 0.00018 21.5 0.0 0.00025 21.0 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor RNHCP PF12647.2 gi|452211462|ref|YP_007491576.1| - 0.037 13.8 0.1 0.055 13.2 0.1 1.2 1 0 0 1 1 1 0 RNHCP domain Lar_restr_allev PF14354.1 gi|452211462|ref|YP_007491576.1| - 0.055 13.7 0.4 0.097 12.9 0.3 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar DUF164 PF02591.10 gi|452211462|ref|YP_007491576.1| - 0.11 12.3 0.3 0.19 11.5 0.2 1.4 1 0 0 1 1 1 0 Putative zinc ribbon domain PPK2 PF03976.9 gi|452211464|ref|YP_007491578.1| - 2.7e-135 448.8 5.4 5.7e-85 284.2 1.5 2.1 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) AAA_33 PF13671.1 gi|452211464|ref|YP_007491578.1| - 0.0033 17.3 0.0 0.5 10.2 0.0 3.1 1 1 1 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|452211464|ref|YP_007491578.1| - 0.016 15.5 5.8 0.45 10.8 0.2 3.4 3 0 0 3 3 3 0 AAA domain Response_reg PF00072.19 gi|452211465|ref|YP_007491579.1| - 5e-24 84.4 0.0 6.2e-24 84.1 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Glycos_transf_1 PF00534.15 gi|452211465|ref|YP_007491579.1| - 0.058 12.8 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 Response_reg PF00072.19 gi|452211468|ref|YP_007491582.1| - 8.5e-25 86.9 0.0 1.1e-24 86.5 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.7 gi|452211469|ref|YP_007491583.1| - 1e-30 105.3 2.8 5.7e-30 102.9 1.0 2.8 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|452211469|ref|YP_007491583.1| - 1.8e-16 59.9 0.4 5.2e-16 58.5 0.1 2.0 2 0 0 2 2 2 1 PAS fold Cache_1 PF02743.13 gi|452211469|ref|YP_007491583.1| - 2.5e-13 49.4 0.0 1.2e-12 47.1 0.0 2.1 2 0 0 2 2 2 1 Cache domain HATPase_c PF02518.21 gi|452211469|ref|YP_007491583.1| - 1.1e-11 44.4 0.7 3.1e-11 42.9 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|452211469|ref|YP_007491583.1| - 7.2e-11 42.1 7.5 8.1e-05 22.7 0.0 3.4 2 1 1 3 3 3 2 HAMP domain HATPase_c_2 PF13581.1 gi|452211469|ref|YP_007491583.1| - 0.00039 20.1 0.0 0.0013 18.5 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS PF00989.19 gi|452211469|ref|YP_007491583.1| - 0.00047 19.9 0.1 0.0014 18.3 0.1 1.9 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.9 gi|452211469|ref|YP_007491583.1| - 0.0026 18.1 0.0 0.0075 16.6 0.0 1.8 1 0 0 1 1 1 1 HWE histidine kinase ResB PF05140.9 gi|452211469|ref|YP_007491583.1| - 0.16 10.5 0.1 0.24 9.8 0.1 1.2 1 0 0 1 1 1 0 ResB-like family DUF1724 PF08350.5 gi|452211470|ref|YP_007491584.1| - 2.2e-28 97.5 0.0 4.7e-28 96.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452211470|ref|YP_007491584.1| - 0.0025 17.4 0.2 0.0062 16.1 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|452211470|ref|YP_007491584.1| - 0.023 14.4 0.4 0.057 13.2 0.3 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix DUF1724 PF08350.5 gi|452211474|ref|YP_007491588.1| - 2.1e-24 84.7 0.0 3.7e-24 84.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|452211474|ref|YP_007491588.1| - 0.0008 19.6 0.0 0.0014 18.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIID_90kDa PF04494.10 gi|452211474|ref|YP_007491588.1| - 0.013 15.6 1.1 0.018 15.1 0.1 1.7 2 0 0 2 2 2 0 WD40 associated region in TFIID subunit HTH_45 PF14947.1 gi|452211474|ref|YP_007491588.1| - 0.1 12.4 0.1 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DUF4206 PF13901.1 gi|452211474|ref|YP_007491588.1| - 0.1 12.1 0.2 4.5 6.7 0.0 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4206) PAS_3 PF08447.6 gi|452211475|ref|YP_007491589.1| - 2.5e-37 126.8 0.6 2.4e-18 65.9 0.0 2.2 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.1 gi|452211475|ref|YP_007491589.1| - 8.3e-15 55.0 0.4 1.6e-06 28.4 0.0 2.2 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|452211475|ref|YP_007491589.1| - 4.4e-10 39.3 1.1 0.00045 19.9 0.1 2.6 2 2 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|452211475|ref|YP_007491589.1| - 5.9e-06 26.2 0.0 0.065 13.1 0.0 2.2 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|452211475|ref|YP_007491589.1| - 1.4e-05 25.0 0.0 0.074 13.1 0.0 2.5 2 1 0 2 2 2 2 PAS fold MoaE PF02391.12 gi|452211475|ref|YP_007491589.1| - 0.006 16.3 0.2 0.19 11.5 0.0 2.3 2 0 0 2 2 2 1 MoaE protein zf-ZPR1 PF03367.8 gi|452211475|ref|YP_007491589.1| - 0.0091 15.1 0.8 2.1 7.4 0.2 2.2 2 0 0 2 2 2 2 ZPR1 zinc-finger domain DUF3116 PF11313.3 gi|452211475|ref|YP_007491589.1| - 0.055 13.0 0.4 11 5.6 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3116) DUF2769 PF10967.3 gi|452211476|ref|YP_007491590.1| - 4.6e-06 26.8 1.1 4.9e-06 26.7 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) B12-binding PF02310.14 gi|452211478|ref|YP_007491592.1| - 2.4e-26 91.9 0.4 4.8e-26 91.0 0.3 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|452211478|ref|YP_007491592.1| - 2.1e-18 66.1 0.8 3.7e-18 65.3 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain ComA PF02679.10 gi|452211478|ref|YP_007491592.1| - 0.0091 15.0 0.5 0.069 12.1 0.0 2.1 2 1 0 2 2 2 1 (2R)-phospho-3-sulfolactate synthase (ComA) SpoVAD PF07451.6 gi|452211478|ref|YP_007491592.1| - 0.034 12.6 0.0 0.043 12.2 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) AA_permease_2 PF13520.1 gi|452211479|ref|YP_007491593.1| - 7.5e-67 225.7 48.8 9.1e-67 225.4 33.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|452211479|ref|YP_007491593.1| - 4.6e-13 48.3 41.6 9.2e-13 47.3 28.8 1.5 1 1 0 1 1 1 1 Amino acid permease HisKA_2 PF07568.7 gi|452211480|ref|YP_007491594.1| - 3.5e-31 106.8 1.2 3.5e-31 106.8 0.8 2.2 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|452211480|ref|YP_007491594.1| - 1.4e-16 60.3 0.8 2.4e-16 59.6 0.1 1.8 2 0 0 2 2 2 1 PAS fold Cache_1 PF02743.13 gi|452211480|ref|YP_007491594.1| - 4.8e-13 48.4 0.0 1.3e-12 47.1 0.0 1.7 1 0 0 1 1 1 1 Cache domain HATPase_c PF02518.21 gi|452211480|ref|YP_007491594.1| - 5.6e-11 42.1 0.1 1.3e-10 40.9 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|452211480|ref|YP_007491594.1| - 1e-10 41.5 6.4 1.7e-05 24.8 0.1 3.0 2 1 1 3 3 3 2 HAMP domain HATPase_c_2 PF13581.1 gi|452211480|ref|YP_007491594.1| - 1.2e-06 28.3 0.0 3.2e-06 26.9 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.1 gi|452211480|ref|YP_007491594.1| - 0.00013 22.2 0.1 0.00064 20.0 0.0 2.2 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.9 gi|452211480|ref|YP_007491594.1| - 0.00079 19.8 0.0 0.0027 18.1 0.0 1.9 1 0 0 1 1 1 1 HWE histidine kinase PAS PF00989.19 gi|452211480|ref|YP_007491594.1| - 0.018 14.8 0.3 0.11 12.2 0.0 2.6 3 0 0 3 3 3 0 PAS fold tRNA-synt_1 PF00133.17 gi|452211481|ref|YP_007491595.1| - 3e-157 524.2 0.1 4.2e-157 523.7 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|452211481|ref|YP_007491595.1| - 2.3e-37 128.1 0.3 4.4e-37 127.1 0.2 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|452211481|ref|YP_007491595.1| - 2.4e-19 69.3 0.5 2.2e-11 43.0 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|452211481|ref|YP_007491595.1| - 2.8e-05 23.4 0.0 4.7e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|452211481|ref|YP_007491595.1| - 0.0022 17.2 0.0 0.0067 15.7 0.0 1.8 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.13 gi|452211481|ref|YP_007491595.1| - 0.0046 15.6 0.0 0.009 14.7 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (K) MAF_flag10 PF01973.13 gi|452211482|ref|YP_007491596.1| - 2.7e-25 88.8 0.0 3.7e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 DUF2100 PF09873.4 gi|452211482|ref|YP_007491596.1| - 0.092 12.1 0.0 0.29 10.5 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2100) DUF2082 PF09855.4 gi|452211484|ref|YP_007491598.1| - 2.2e-06 27.4 3.9 1.2e-05 25.0 2.7 1.9 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-ribbon_3 PF13248.1 gi|452211484|ref|YP_007491598.1| - 0.0051 15.9 1.8 0.077 12.2 0.2 2.2 2 0 0 2 2 2 1 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|452211484|ref|YP_007491598.1| - 0.0058 16.0 5.0 0.048 13.1 0.4 2.4 2 0 0 2 2 2 1 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|452211484|ref|YP_007491598.1| - 0.012 14.9 5.1 0.26 10.6 0.7 2.4 2 1 0 2 2 2 0 TFIIB zinc-binding PhnA_Zn_Ribbon PF08274.7 gi|452211484|ref|YP_007491598.1| - 0.016 14.9 3.5 0.072 12.8 0.3 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.1 gi|452211484|ref|YP_007491598.1| - 0.028 13.9 1.3 0.028 13.9 0.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|452211484|ref|YP_007491598.1| - 0.03 13.5 0.7 0.057 12.6 0.5 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.5 gi|452211484|ref|YP_007491598.1| - 0.036 14.0 4.0 1.3 9.0 0.3 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.3 gi|452211484|ref|YP_007491598.1| - 0.067 13.1 0.5 3.2 7.7 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Lar_restr_allev PF14354.1 gi|452211484|ref|YP_007491598.1| - 0.077 13.3 3.7 0.17 12.2 2.6 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar ADK_lid PF05191.9 gi|452211484|ref|YP_007491598.1| - 0.12 12.0 1.8 3 7.6 0.2 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-tcix PF14952.1 gi|452211484|ref|YP_007491598.1| - 0.12 11.6 0.3 0.12 11.6 0.2 1.7 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Zn_Tnp_IS1595 PF12760.2 gi|452211484|ref|YP_007491598.1| - 0.19 11.5 3.1 5.5 6.8 2.3 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-ISL3 PF14690.1 gi|452211484|ref|YP_007491598.1| - 0.22 11.5 1.3 1.8 8.6 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TFIIS_C PF01096.13 gi|452211484|ref|YP_007491598.1| - 0.29 10.8 7.1 2.1 8.0 0.4 2.4 3 0 0 3 3 2 0 Transcription factor S-II (TFIIS) DUF1936 PF09151.5 gi|452211484|ref|YP_007491598.1| - 0.6 9.6 3.9 1.5 8.4 0.3 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1936) OrfB_Zn_ribbon PF07282.6 gi|452211484|ref|YP_007491598.1| - 0.76 9.4 3.1 31 4.3 2.2 2.1 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.14 gi|452211484|ref|YP_007491598.1| - 1.6 8.3 5.2 0.36 10.3 0.9 1.9 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DUF1610 PF07754.6 gi|452211484|ref|YP_007491598.1| - 2.8 8.1 7.3 5.4 7.2 1.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) AAA_14 PF13173.1 gi|452211486|ref|YP_007491600.1| - 3.5e-14 52.8 0.0 9.6e-14 51.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|452211486|ref|YP_007491600.1| - 1.8e-10 40.8 0.1 3e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) CTP_transf_2 PF01467.21 gi|452211487|ref|YP_007491601.1| - 9e-07 29.0 0.0 3.7e-06 27.0 0.0 2.0 2 2 0 2 2 2 1 Cytidylyltransferase TrmB PF01978.14 gi|452211488|ref|YP_007491602.1| - 3.2e-11 42.7 1.1 2.1e-05 24.1 0.1 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.1 gi|452211488|ref|YP_007491602.1| - 9.8e-07 28.2 0.2 0.002 17.7 0.0 2.4 2 0 0 2 2 2 2 Homeodomain-like domain HTH_28 PF13518.1 gi|452211488|ref|YP_007491602.1| - 2e-06 27.6 0.1 0.00037 20.4 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|452211488|ref|YP_007491602.1| - 3.4e-05 23.4 1.3 0.044 13.4 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_29 PF13551.1 gi|452211488|ref|YP_007491602.1| - 5e-05 23.4 0.1 0.0039 17.3 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn helix HTH_24 PF13412.1 gi|452211488|ref|YP_007491602.1| - 0.00045 19.5 0.7 0.0015 17.8 0.2 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|452211488|ref|YP_007491602.1| - 0.00046 19.8 0.0 0.04 13.5 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_17 PF12728.2 gi|452211488|ref|YP_007491602.1| - 0.00078 19.6 1.1 0.94 9.7 0.0 3.1 3 0 0 3 3 3 2 Helix-turn-helix domain GerE PF00196.14 gi|452211488|ref|YP_007491602.1| - 0.0015 17.7 2.7 0.049 12.9 0.4 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_20 PF12840.2 gi|452211488|ref|YP_007491602.1| - 0.0017 18.1 0.0 0.98 9.2 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain TetR_N PF00440.18 gi|452211488|ref|YP_007491602.1| - 0.0029 17.2 2.5 0.24 11.0 0.0 3.2 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family UPF0122 PF04297.9 gi|452211488|ref|YP_007491602.1| - 0.0066 16.4 1.5 0.28 11.2 0.0 2.6 2 0 0 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like MarR PF01047.17 gi|452211488|ref|YP_007491602.1| - 0.0076 15.9 0.7 4.2 7.1 0.1 2.3 2 0 0 2 2 2 2 MarR family Terminase_5 PF06056.7 gi|452211488|ref|YP_007491602.1| - 0.011 15.2 0.2 2.8 7.5 0.0 3.0 3 0 0 3 3 3 0 Putative ATPase subunit of terminase (gpP-like) MotA_activ PF09114.5 gi|452211488|ref|YP_007491602.1| - 0.012 15.2 0.8 0.034 13.9 0.0 2.0 2 0 0 2 2 2 0 Transcription factor MotA, activation domain Rrf2 PF02082.15 gi|452211488|ref|YP_007491602.1| - 0.024 14.7 1.5 0.1 12.7 0.1 2.2 2 0 0 2 2 2 0 Transcriptional regulator PadR PF03551.9 gi|452211488|ref|YP_007491602.1| - 0.035 13.8 0.2 5.1 6.9 0.0 3.0 3 0 0 3 3 3 0 Transcriptional regulator PadR-like family HTH_27 PF13463.1 gi|452211488|ref|YP_007491602.1| - 0.04 14.2 0.8 9.4 6.6 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_6 PF01418.12 gi|452211488|ref|YP_007491602.1| - 0.044 13.5 0.1 3.4 7.4 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_38 PF13936.1 gi|452211488|ref|YP_007491602.1| - 0.044 13.3 0.3 8.7 5.9 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|452211488|ref|YP_007491602.1| - 0.1 11.7 0.0 0.29 10.3 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_1 PF00126.22 gi|452211488|ref|YP_007491602.1| - 0.12 12.1 0.1 0.27 10.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_19 PF12844.2 gi|452211488|ref|YP_007491602.1| - 0.17 11.9 1.5 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|452211488|ref|YP_007491602.1| - 0.17 11.5 3.7 0.81 9.3 0.2 2.7 2 0 0 2 2 2 0 HTH domain HTH_40 PF14493.1 gi|452211488|ref|YP_007491602.1| - 0.2 11.8 3.5 0.52 10.5 0.0 3.0 3 2 0 3 3 3 0 Helix-turn-helix domain Fer4_13 PF13370.1 gi|452211489|ref|YP_007491603.1| - 4e-20 71.9 8.7 4.8e-20 71.7 6.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|452211489|ref|YP_007491603.1| - 8.1e-11 42.3 6.9 1.1e-10 41.9 4.8 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|452211489|ref|YP_007491603.1| - 1.5e-06 28.3 3.3 2.4e-06 27.6 2.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211489|ref|YP_007491603.1| - 0.0052 17.1 4.3 0.024 15.0 3.1 1.9 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|452211489|ref|YP_007491603.1| - 0.0082 15.9 1.1 0.011 15.5 0.8 1.2 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_21 PF14697.1 gi|452211489|ref|YP_007491603.1| - 0.011 15.5 6.4 0.045 13.6 3.2 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452211489|ref|YP_007491603.1| - 0.02 14.5 8.5 0.24 11.0 0.6 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211489|ref|YP_007491603.1| - 0.023 15.4 4.0 0.91 10.3 3.0 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|452211489|ref|YP_007491603.1| - 0.2 11.7 0.4 0.2 11.7 0.3 2.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211489|ref|YP_007491603.1| - 0.78 9.5 6.7 3.3 7.5 4.9 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211489|ref|YP_007491603.1| - 3.8 7.6 10.0 0.3 11.0 1.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211489|ref|YP_007491603.1| - 4.8 7.2 8.7 6.8 6.7 1.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.15 gi|452211490|ref|YP_007491604.1| - 1.3e-06 27.9 0.1 3.4e-06 26.6 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452211490|ref|YP_007491604.1| - 4e-06 26.5 0.3 1.1e-05 25.0 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|452211490|ref|YP_007491604.1| - 0.0027 17.4 0.3 0.0066 16.2 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DUF3826 PF12875.2 gi|452211490|ref|YP_007491604.1| - 0.016 14.8 0.1 0.034 13.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3826) HTH_34 PF13601.1 gi|452211490|ref|YP_007491604.1| - 0.021 14.8 0.1 0.058 13.4 0.1 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|452211490|ref|YP_007491604.1| - 0.041 13.2 0.1 0.12 11.7 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.6 gi|452211490|ref|YP_007491604.1| - 0.072 13.0 0.0 0.23 11.4 0.0 1.8 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein BRCA-2_OB3 PF09104.5 gi|452211490|ref|YP_007491604.1| - 0.091 12.5 0.1 0.18 11.5 0.1 1.5 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DUF919 PF06034.6 gi|452211490|ref|YP_007491604.1| - 0.14 11.7 1.2 5.4 6.7 0.1 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) Wyosine_form PF08608.7 gi|452211491|ref|YP_007491605.1| - 0.075 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Wyosine base formation VWA_2 PF13519.1 gi|452211492|ref|YP_007491606.1| - 6.1e-10 39.4 0.0 1e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|452211492|ref|YP_007491606.1| - 6.4e-06 26.0 0.0 1.6e-05 24.7 0.0 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain CbbQ_C PF08406.5 gi|452211494|ref|YP_007491608.1| - 1e-33 115.1 0.1 9.1e-33 112.1 0.0 2.1 2 0 0 2 2 2 1 CbbQ/NirQ/NorQ C-terminal AAA_5 PF07728.9 gi|452211494|ref|YP_007491608.1| - 3.6e-32 110.9 0.0 4.8e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|452211494|ref|YP_007491608.1| - 0.00034 20.7 0.0 0.00058 19.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|452211494|ref|YP_007491608.1| - 0.0016 18.2 0.0 0.0037 17.1 0.0 1.7 1 1 1 2 2 2 1 AAA domain AAA PF00004.24 gi|452211494|ref|YP_007491608.1| - 0.0021 18.2 0.0 0.0034 17.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.6 gi|452211494|ref|YP_007491608.1| - 0.0041 16.7 0.0 0.0062 16.1 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|452211494|ref|YP_007491608.1| - 0.0089 15.5 0.0 0.022 14.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|452211494|ref|YP_007491608.1| - 0.018 14.2 0.0 2.4 7.2 0.0 2.3 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|452211494|ref|YP_007491608.1| - 0.025 14.7 0.0 0.043 14.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.10 gi|452211494|ref|YP_007491608.1| - 0.027 14.2 0.0 0.041 13.6 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Arch_ATPase PF01637.13 gi|452211494|ref|YP_007491608.1| - 0.028 14.1 0.0 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 Archaeal ATPase NACHT PF05729.7 gi|452211494|ref|YP_007491608.1| - 0.051 13.2 0.0 0.091 12.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Radical_SAM PF04055.16 gi|452211495|ref|YP_007491609.1| - 2.7e-05 24.4 1.0 2.7e-05 24.4 0.7 2.4 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452211495|ref|YP_007491609.1| - 0.00017 21.7 1.5 0.00057 20.0 1.0 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452211495|ref|YP_007491609.1| - 0.026 14.5 0.1 0.076 13.0 0.1 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain zf-tcix PF14952.1 gi|452211495|ref|YP_007491609.1| - 5.2 6.4 11.4 5 6.5 0.3 2.4 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding HisKA_2 PF07568.7 gi|452211496|ref|YP_007491610.1| - 5.6e-28 96.6 0.2 1.3e-27 95.4 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|452211496|ref|YP_007491610.1| - 1.1e-15 57.4 0.0 2e-15 56.6 0.0 1.4 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|452211496|ref|YP_007491610.1| - 2.9e-12 46.2 0.1 7.7e-12 44.9 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|452211496|ref|YP_007491610.1| - 1.4e-06 28.6 0.0 2.7e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.1 gi|452211496|ref|YP_007491610.1| - 0.00021 21.6 0.0 0.00077 19.8 0.0 2.0 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|452211496|ref|YP_007491610.1| - 0.02 14.6 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Nup188 PF10487.4 gi|452211497|ref|YP_007491611.1| - 0.047 11.6 0.1 0.053 11.4 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 Dpoe2NT PF12213.3 gi|452211497|ref|YP_007491611.1| - 0.14 12.0 0.4 0.22 11.4 0.3 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal Nitroreductase PF00881.19 gi|452211498|ref|YP_007491612.1| - 7.5e-21 74.6 0.0 8.6e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family His_Phos_1 PF00300.17 gi|452211499|ref|YP_007491613.1| - 2.4e-40 138.1 0.0 3e-40 137.9 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF4110 PF13422.1 gi|452211499|ref|YP_007491613.1| - 0.022 14.5 0.0 0.049 13.4 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4110) HD PF01966.17 gi|452211500|ref|YP_007491614.1| - 2.6e-08 33.9 0.7 4.2e-08 33.2 0.4 1.4 1 1 0 1 1 1 1 HD domain PepSY PF03413.14 gi|452211501|ref|YP_007491615.1| - 2.6e-08 34.3 0.7 0.0049 17.4 0.1 3.6 3 2 0 3 3 3 2 Peptidase propeptide and YPEB domain YPEB PF14620.1 gi|452211501|ref|YP_007491615.1| - 0.0032 16.5 2.5 0.0097 14.9 0.3 2.1 1 1 1 2 2 2 1 YpeB sporulation PepSY PF03413.14 gi|452211502|ref|YP_007491616.1| - 7.3e-08 32.9 1.2 0.0019 18.8 0.2 3.4 3 0 0 3 3 3 2 Peptidase propeptide and YPEB domain YPEB PF14620.1 gi|452211502|ref|YP_007491616.1| - 0.00074 18.6 2.2 0.0039 16.2 0.1 2.1 1 1 1 2 2 2 1 YpeB sporulation RNA_polI_A14 PF08203.6 gi|452211502|ref|YP_007491616.1| - 0.015 15.5 0.8 0.82 9.9 0.0 2.4 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 DDE_3 PF13358.1 gi|452211503|ref|YP_007491617.1| - 4.3e-20 71.9 0.1 5.4e-20 71.6 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF3228 PF11539.3 gi|452211503|ref|YP_007491617.1| - 0.0003 19.9 0.4 0.00045 19.3 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) rve PF00665.21 gi|452211503|ref|YP_007491617.1| - 0.011 15.7 0.0 0.023 14.8 0.0 1.5 1 0 0 1 1 1 0 Integrase core domain DUF287 PF03384.9 gi|452211503|ref|YP_007491617.1| - 0.044 13.9 0.7 0.044 13.9 0.5 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 Uds1 PF15456.1 gi|452211503|ref|YP_007491617.1| - 0.061 13.3 0.2 0.17 11.8 0.1 1.7 1 0 0 1 1 1 0 Up-regulated During Septation HTH_29 PF13551.1 gi|452211504|ref|YP_007491618.1| - 7.5e-14 51.8 0.0 8.2e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|452211504|ref|YP_007491618.1| - 1.7e-10 41.5 0.0 1.9e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Homeodomain-like domain ResIII PF04851.10 gi|452211505|ref|YP_007491619.1| - 2.4e-26 92.7 0.0 1.6e-24 86.7 0.0 2.8 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|452211505|ref|YP_007491619.1| - 2.5e-17 62.5 0.4 6.5e-17 61.1 0.1 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|452211505|ref|YP_007491619.1| - 1.3e-09 37.7 0.0 3e-09 36.5 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 gi|452211505|ref|YP_007491619.1| - 1.7e-05 23.8 0.0 0.00019 20.3 0.0 2.3 1 1 0 1 1 1 1 SNF2 family N-terminal domain AAA_19 PF13245.1 gi|452211505|ref|YP_007491619.1| - 0.062 13.0 0.3 0.92 9.3 0.0 2.7 3 0 0 3 3 3 0 Part of AAA domain Rubis-subs-bind PF09273.6 gi|452211506|ref|YP_007491620.1| - 0.049 13.5 0.7 0.054 13.4 0.5 1.1 1 0 0 1 1 1 0 Rubisco LSMT substrate-binding HSP20 PF00011.16 gi|452211508|ref|YP_007491622.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.6 1 1 0 1 1 1 0 Hsp20/alpha crystallin family DUF2215 PF10225.4 gi|452211509|ref|YP_007491623.1| - 0.086 12.2 4.7 0.087 12.2 3.2 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2215) DUF975 PF06161.6 gi|452211510|ref|YP_007491624.1| - 0.38 10.4 21.3 0.67 9.6 14.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF975) SID-1_RNA_chan PF13965.1 gi|452211510|ref|YP_007491624.1| - 0.46 8.5 5.3 0.33 9.0 0.4 2.0 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 ERGIC_N PF13850.1 gi|452211510|ref|YP_007491624.1| - 0.76 9.7 4.3 2.8 7.9 0.0 2.4 2 1 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4013 PF13197.1 gi|452211510|ref|YP_007491624.1| - 1.8 7.8 27.7 3 7.1 19.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4013) Acetyltransf_1 PF00583.19 gi|452211511|ref|YP_007491625.1| - 5e-13 48.8 0.4 6.8e-13 48.4 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452211511|ref|YP_007491625.1| - 1.2e-12 47.8 0.1 1.6e-12 47.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452211511|ref|YP_007491625.1| - 1.9e-06 27.9 0.0 2.3e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|452211511|ref|YP_007491625.1| - 0.00045 20.0 0.1 0.0023 17.7 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|452211511|ref|YP_007491625.1| - 0.00081 19.1 0.1 0.0012 18.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_5 PF13444.1 gi|452211511|ref|YP_007491625.1| - 0.0012 19.4 0.1 0.054 14.0 0.0 2.2 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|452211511|ref|YP_007491625.1| - 0.016 15.1 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain KaiC PF06745.8 gi|452211512|ref|YP_007491626.1| - 7.1e-61 205.2 0.0 7.9e-61 205.0 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|452211512|ref|YP_007491626.1| - 1.3e-05 24.6 0.0 2.2e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain GvpD PF07088.6 gi|452211512|ref|YP_007491626.1| - 2.7e-05 22.6 0.2 0.00058 18.3 0.1 2.2 1 1 0 1 1 1 1 GvpD gas vesicle protein DUF2075 PF09848.4 gi|452211512|ref|YP_007491626.1| - 0.00094 18.2 0.0 0.0018 17.3 0.0 1.5 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|452211512|ref|YP_007491626.1| - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 Part of AAA domain RecA PF00154.16 gi|452211512|ref|YP_007491626.1| - 0.0039 16.2 0.0 0.0053 15.8 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|452211512|ref|YP_007491626.1| - 0.0049 16.3 0.1 0.018 14.5 0.0 1.8 2 1 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_22 PF13401.1 gi|452211512|ref|YP_007491626.1| - 0.01 15.9 1.0 0.24 11.5 0.7 2.4 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.21 gi|452211512|ref|YP_007491626.1| - 0.078 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_14 PF13173.1 gi|452211512|ref|YP_007491626.1| - 0.11 12.4 0.1 0.57 10.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain Response_reg PF00072.19 gi|452211513|ref|YP_007491627.1| - 3.7e-28 97.7 0.1 8.1e-28 96.6 0.1 1.6 2 0 0 2 2 2 1 Response regulator receiver domain DUF3939 PF13075.1 gi|452211513|ref|YP_007491627.1| - 0.057 13.1 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3939) KaiC PF06745.8 gi|452211514|ref|YP_007491628.1| - 1e-43 149.0 0.2 1.2e-43 148.9 0.1 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.16 gi|452211514|ref|YP_007491628.1| - 1e-07 31.3 0.4 1.7e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein IstB_IS21 PF01695.12 gi|452211514|ref|YP_007491628.1| - 1.7e-06 27.6 0.3 0.00014 21.3 0.0 2.4 2 1 1 3 3 3 1 IstB-like ATP binding protein GvpD PF07088.6 gi|452211514|ref|YP_007491628.1| - 3.5e-06 25.6 0.1 5.9e-06 24.8 0.1 1.3 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.1 gi|452211514|ref|YP_007491628.1| - 3.7e-06 26.4 0.3 1.5e-05 24.5 0.2 1.9 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.10 gi|452211514|ref|YP_007491628.1| - 1.4e-05 24.0 0.0 0.00033 19.6 0.0 2.2 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_16 PF13191.1 gi|452211514|ref|YP_007491628.1| - 2.6e-05 24.2 0.0 3.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Zot PF05707.7 gi|452211514|ref|YP_007491628.1| - 5.4e-05 22.7 0.0 0.0036 16.8 0.0 2.2 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) NTPase_1 PF03266.10 gi|452211514|ref|YP_007491628.1| - 5.5e-05 22.9 0.9 0.00036 20.2 0.6 2.1 1 1 0 1 1 1 1 NTPase DUF2075 PF09848.4 gi|452211514|ref|YP_007491628.1| - 6e-05 22.1 0.0 7.5e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|452211514|ref|YP_007491628.1| - 0.00012 22.1 0.1 0.00039 20.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain DEAD PF00270.24 gi|452211514|ref|YP_007491628.1| - 0.00027 20.4 0.0 0.00055 19.4 0.0 1.6 1 1 0 1 1 1 1 DEAD/DEAH box helicase cobW PF02492.14 gi|452211514|ref|YP_007491628.1| - 0.00034 20.1 0.7 0.0011 18.3 0.3 1.8 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.9 gi|452211514|ref|YP_007491628.1| - 0.00089 18.9 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|452211514|ref|YP_007491628.1| - 0.0011 18.6 0.0 0.0021 17.7 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_24 PF13479.1 gi|452211514|ref|YP_007491628.1| - 0.003 17.1 1.4 0.04 13.4 1.0 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|452211514|ref|YP_007491628.1| - 0.0031 17.7 0.1 0.022 14.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|452211514|ref|YP_007491628.1| - 0.004 17.0 0.1 0.014 15.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|452211514|ref|YP_007491628.1| - 0.02 14.5 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase T2SE PF00437.15 gi|452211514|ref|YP_007491628.1| - 0.021 13.7 0.0 0.033 13.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ResIII PF04851.10 gi|452211514|ref|YP_007491628.1| - 0.027 14.3 0.0 0.049 13.4 0.0 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ArgK PF03308.11 gi|452211514|ref|YP_007491628.1| - 0.028 13.1 0.3 3 6.5 0.1 2.1 2 0 0 2 2 2 0 ArgK protein AAA_18 PF13238.1 gi|452211514|ref|YP_007491628.1| - 0.068 13.4 2.0 0.18 12.1 1.4 1.8 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.16 gi|452211514|ref|YP_007491628.1| - 0.092 12.1 0.1 0.4 10.1 0.1 1.9 1 1 0 1 1 1 0 Guanylate kinase AAA_28 PF13521.1 gi|452211514|ref|YP_007491628.1| - 0.1 12.5 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF835 PF05763.7 gi|452211514|ref|YP_007491628.1| - 0.12 11.9 0.2 0.23 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_17 PF13207.1 gi|452211514|ref|YP_007491628.1| - 0.12 13.2 1.5 0.29 11.9 1.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|452211514|ref|YP_007491628.1| - 0.12 11.7 0.1 0.42 9.9 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain Peptidase_M50 PF02163.17 gi|452211515|ref|YP_007491629.1| - 3.9e-27 94.4 0.0 6.2e-26 90.5 0.0 2.4 2 1 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 gi|452211515|ref|YP_007491629.1| - 2.3e-15 56.2 0.0 1.5e-08 34.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.19 gi|452211515|ref|YP_007491629.1| - 0.00044 20.3 0.1 0.79 9.9 0.0 2.5 2 0 0 2 2 2 2 PDZ domain (Also known as DHR or GLGF) GRASP55_65 PF04495.9 gi|452211515|ref|YP_007491629.1| - 0.053 13.4 0.1 1.9 8.4 0.0 2.5 1 1 1 2 2 2 0 GRASP55/65 PDZ-like domain CutA1 PF03091.10 gi|452211516|ref|YP_007491630.1| - 1.3e-28 98.6 0.2 1.4e-28 98.5 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein FixG_C PF11614.3 gi|452211517|ref|YP_007491631.1| - 0.0067 16.5 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase Calpain_inhib PF00748.14 gi|452211517|ref|YP_007491631.1| - 0.03 14.6 1.3 0.048 14.0 0.9 1.2 1 0 0 1 1 1 0 Calpain inhibitor NPCBM_assoc PF10633.4 gi|452211517|ref|YP_007491631.1| - 0.053 13.5 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF916 PF06030.7 gi|452211517|ref|YP_007491631.1| - 0.078 12.7 0.5 0.51 10.1 0.0 2.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF916) Cast PF10174.4 gi|452211517|ref|YP_007491631.1| - 0.39 8.7 4.7 0.49 8.3 3.3 1.0 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone DUF2117 PF09890.4 gi|452211518|ref|YP_007491632.1| - 2.6e-82 275.1 0.0 3.4e-82 274.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) MacB_PCD PF12704.2 gi|452211519|ref|YP_007491633.1| - 1.7e-31 109.6 0.0 1.7e-31 109.6 0.0 1.7 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|452211519|ref|YP_007491633.1| - 6.5e-24 84.0 8.7 6.5e-24 84.0 6.0 2.1 2 0 0 2 2 2 1 FtsX-like permease family SUR7 PF06687.7 gi|452211519|ref|YP_007491633.1| - 0.89 9.0 4.1 0.18 11.3 0.3 1.7 2 0 0 2 2 2 0 SUR7/PalI family DUF3344 PF11824.3 gi|452211520|ref|YP_007491634.1| - 3.5e-50 170.8 2.3 4e-50 170.6 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) NPCBM_assoc PF10633.4 gi|452211521|ref|YP_007491635.1| - 0.0092 16.0 0.0 4.3 7.4 0.0 2.9 2 1 1 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase ABC_tran PF00005.22 gi|452211522|ref|YP_007491636.1| - 1e-61 207.2 0.1 2e-32 112.3 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|452211522|ref|YP_007491636.1| - 1.8e-14 54.3 5.5 5e-06 26.6 0.1 4.2 2 2 0 4 4 4 3 AAA domain SMC_N PF02463.14 gi|452211522|ref|YP_007491636.1| - 5.8e-11 42.0 0.2 0.00017 20.8 0.1 3.4 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|452211522|ref|YP_007491636.1| - 1.6e-09 37.9 1.1 0.0002 21.4 0.1 3.3 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|452211522|ref|YP_007491636.1| - 1.4e-08 34.9 4.4 0.00027 20.9 0.1 3.4 3 1 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.1 gi|452211522|ref|YP_007491636.1| - 7.4e-08 31.8 0.0 0.0017 17.8 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF258 PF03193.11 gi|452211522|ref|YP_007491636.1| - 7.5e-08 31.7 0.1 0.00073 18.7 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|452211522|ref|YP_007491636.1| - 1.9e-06 27.3 0.0 0.021 14.2 0.0 3.6 4 0 0 4 4 4 2 AAA domain AAA_33 PF13671.1 gi|452211522|ref|YP_007491636.1| - 7.4e-06 25.8 0.1 0.16 11.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_10 PF12846.2 gi|452211522|ref|YP_007491636.1| - 7.7e-06 25.5 1.9 1.1 8.6 0.0 3.5 3 1 0 3 3 3 2 AAA-like domain AAA_23 PF13476.1 gi|452211522|ref|YP_007491636.1| - 9.6e-06 26.0 1.4 0.072 13.4 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA PF00004.24 gi|452211522|ref|YP_007491636.1| - 1.3e-05 25.3 0.6 0.04 14.1 0.0 3.5 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) UPF0079 PF02367.12 gi|452211522|ref|YP_007491636.1| - 2.6e-05 23.8 0.1 0.11 12.1 0.0 2.6 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_15 PF13175.1 gi|452211522|ref|YP_007491636.1| - 2.9e-05 23.2 0.3 0.41 9.6 0.1 3.9 4 0 0 4 4 4 1 AAA ATPase domain Mg_chelatase PF01078.16 gi|452211522|ref|YP_007491636.1| - 3.2e-05 23.1 0.1 0.01 15.0 0.0 2.6 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI SbcCD_C PF13558.1 gi|452211522|ref|YP_007491636.1| - 3.3e-05 23.7 1.0 0.13 12.1 0.0 3.8 3 2 0 3 3 2 1 Putative exonuclease SbcCD, C subunit NACHT PF05729.7 gi|452211522|ref|YP_007491636.1| - 3.5e-05 23.5 0.3 0.42 10.2 0.0 3.0 3 0 0 3 3 2 2 NACHT domain AAA_5 PF07728.9 gi|452211522|ref|YP_007491636.1| - 3.6e-05 23.5 0.2 0.064 12.9 0.0 3.0 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|452211522|ref|YP_007491636.1| - 4.5e-05 24.2 0.2 0.27 12.0 0.0 3.4 3 0 0 3 3 3 1 AAA domain ABC_ATPase PF09818.4 gi|452211522|ref|YP_007491636.1| - 0.00019 20.1 0.0 0.76 8.2 0.0 3.3 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_14 PF13173.1 gi|452211522|ref|YP_007491636.1| - 0.00032 20.6 0.2 1.4 8.8 0.0 3.1 2 1 0 3 3 3 2 AAA domain Rad17 PF03215.10 gi|452211522|ref|YP_007491636.1| - 0.00042 19.1 0.3 0.0024 16.6 0.0 2.0 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|452211522|ref|YP_007491636.1| - 0.0007 19.9 3.2 0.14 12.4 0.0 3.8 4 1 0 5 5 4 1 AAA domain RNA_helicase PF00910.17 gi|452211522|ref|YP_007491636.1| - 0.00083 19.5 0.1 0.38 10.9 0.0 2.4 2 0 0 2 2 2 1 RNA helicase AAA_28 PF13521.1 gi|452211522|ref|YP_007491636.1| - 0.0011 19.0 0.2 0.65 9.9 0.0 2.8 3 0 0 3 3 2 1 AAA domain Zeta_toxin PF06414.7 gi|452211522|ref|YP_007491636.1| - 0.0015 17.7 0.0 0.14 11.2 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin AAA_19 PF13245.1 gi|452211522|ref|YP_007491636.1| - 0.0041 16.8 0.1 0.36 10.6 0.0 2.7 2 0 0 2 2 2 1 Part of AAA domain MobB PF03205.9 gi|452211522|ref|YP_007491636.1| - 0.0042 16.7 0.0 4.1 7.1 0.0 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|452211522|ref|YP_007491636.1| - 0.0045 15.8 0.0 2.6 6.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain IstB_IS21 PF01695.12 gi|452211522|ref|YP_007491636.1| - 0.0046 16.4 0.0 3 7.2 0.0 2.9 3 0 0 3 3 2 0 IstB-like ATP binding protein AAA_30 PF13604.1 gi|452211522|ref|YP_007491636.1| - 0.005 16.4 0.0 1.4 8.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|452211522|ref|YP_007491636.1| - 0.0054 16.4 0.2 0.46 10.1 0.0 2.6 2 0 0 2 2 2 1 Archaeal ATPase ATP-synt_ab PF00006.20 gi|452211522|ref|YP_007491636.1| - 0.0061 16.0 0.0 1.3 8.4 0.0 2.2 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.17 gi|452211522|ref|YP_007491636.1| - 0.0073 15.7 0.0 0.17 11.3 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain APS_kinase PF01583.15 gi|452211522|ref|YP_007491636.1| - 0.0079 15.8 0.1 4.3 6.9 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_24 PF13479.1 gi|452211522|ref|YP_007491636.1| - 0.0082 15.7 0.1 4.9 6.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain T2SE PF00437.15 gi|452211522|ref|YP_007491636.1| - 0.0098 14.8 0.0 2.8 6.7 0.0 2.6 2 0 0 2 2 2 0 Type II/IV secretion system protein PduV-EutP PF10662.4 gi|452211522|ref|YP_007491636.1| - 0.011 15.2 0.0 1.8 8.0 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Miro PF08477.8 gi|452211522|ref|YP_007491636.1| - 0.011 16.1 0.0 6.4 7.3 0.0 2.9 3 0 0 3 3 2 0 Miro-like protein HeH PF12949.2 gi|452211522|ref|YP_007491636.1| - 0.019 14.4 0.0 0.064 12.8 0.0 1.9 1 0 0 1 1 1 0 HeH/LEM domain DUF815 PF05673.8 gi|452211522|ref|YP_007491636.1| - 0.025 13.5 0.1 0.076 11.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.1 gi|452211522|ref|YP_007491636.1| - 0.028 14.4 0.1 5.5 7.0 0.0 2.7 3 0 0 3 3 2 0 Sigma-54 interaction domain AAA_13 PF13166.1 gi|452211522|ref|YP_007491636.1| - 0.034 12.6 0.1 0.34 9.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|452211522|ref|YP_007491636.1| - 0.038 13.4 0.0 5.2 6.5 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain SAP PF02037.22 gi|452211522|ref|YP_007491636.1| - 0.048 13.1 0.0 0.28 10.7 0.0 2.4 2 0 0 2 2 1 0 SAP domain NTPase_1 PF03266.10 gi|452211522|ref|YP_007491636.1| - 0.062 12.9 0.4 5.7 6.6 0.0 3.2 3 0 0 3 3 3 0 NTPase G-alpha PF00503.15 gi|452211522|ref|YP_007491636.1| - 0.071 11.7 0.1 3.2 6.3 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit GTP_EFTU PF00009.22 gi|452211522|ref|YP_007491636.1| - 0.085 12.2 0.1 0.93 8.8 0.0 2.4 3 0 0 3 3 2 0 Elongation factor Tu GTP binding domain CPT PF07931.7 gi|452211522|ref|YP_007491636.1| - 0.12 12.0 0.0 0.43 10.1 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein ATP_bind_1 PF03029.12 gi|452211522|ref|YP_007491636.1| - 0.13 11.7 0.1 16 4.9 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.18 gi|452211522|ref|YP_007491636.1| - 0.14 12.1 0.4 7.6 6.5 0.0 2.8 3 0 0 3 3 2 0 50S ribosome-binding GTPase cobW PF02492.14 gi|452211522|ref|YP_007491636.1| - 0.58 9.5 3.3 4.5 6.6 0.1 2.8 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF87 PF01935.12 gi|452211522|ref|YP_007491636.1| - 0.64 9.7 3.0 19 4.9 0.0 3.1 3 1 0 3 3 3 0 Domain of unknown function DUF87 CbiQ PF02361.11 gi|452211523|ref|YP_007491637.1| - 2.3e-32 112.3 8.9 3e-32 111.9 6.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein DUF3344 PF11824.3 gi|452211524|ref|YP_007491638.1| - 3.6e-79 265.9 1.7 4.4e-79 265.6 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) DUF3953 PF13129.1 gi|452211524|ref|YP_007491638.1| - 0.056 13.0 0.2 0.12 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) DUF3344 PF11824.3 gi|452211525|ref|YP_007491639.1| - 5.8e-76 255.4 0.2 8.7e-76 254.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) CARDB PF07705.6 gi|452211525|ref|YP_007491639.1| - 4.2e-38 129.4 3.0 4.3e-20 71.6 3.5 2.5 2 0 0 2 2 2 2 CARDB EF-hand_5 PF13202.1 gi|452211525|ref|YP_007491639.1| - 0.045 13.1 2.2 0.14 11.5 1.6 1.9 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.27 gi|452211525|ref|YP_007491639.1| - 0.14 11.5 1.2 0.53 9.7 0.8 2.0 1 0 0 1 1 1 0 EF hand DUF3344 PF11824.3 gi|452211526|ref|YP_007491640.1| - 6.2e-73 245.5 1.3 7.1e-73 245.3 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) ABC_tran PF00005.22 gi|452211527|ref|YP_007491641.1| - 2.7e-33 115.1 0.0 3.7e-33 114.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452211527|ref|YP_007491641.1| - 1.6e-14 54.5 0.0 9.1e-08 32.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452211527|ref|YP_007491641.1| - 1.8e-08 33.8 0.1 1.3e-05 24.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452211527|ref|YP_007491641.1| - 6.2e-07 28.8 0.0 5.8e-05 22.3 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.2 gi|452211527|ref|YP_007491641.1| - 5.1e-05 22.8 0.0 0.087 12.2 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain DUF258 PF03193.11 gi|452211527|ref|YP_007491641.1| - 9.8e-05 21.5 0.0 0.00018 20.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|452211527|ref|YP_007491641.1| - 0.00011 22.1 0.0 0.00022 21.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|452211527|ref|YP_007491641.1| - 0.00014 21.3 0.0 0.00052 19.5 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|452211527|ref|YP_007491641.1| - 0.011 15.8 0.0 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Arch_ATPase PF01637.13 gi|452211527|ref|YP_007491641.1| - 0.018 14.7 0.0 0.038 13.6 0.0 1.5 2 0 0 2 2 2 0 Archaeal ATPase SbcCD_C PF13558.1 gi|452211527|ref|YP_007491641.1| - 0.022 14.6 0.0 0.18 11.7 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.1 gi|452211527|ref|YP_007491641.1| - 0.025 13.9 0.0 0.062 12.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|452211527|ref|YP_007491641.1| - 0.036 13.9 0.0 0.096 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA PF00004.24 gi|452211527|ref|YP_007491641.1| - 0.051 13.7 0.2 1.8 8.7 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|452211527|ref|YP_007491641.1| - 0.11 11.2 0.1 0.43 9.3 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_17 PF13207.1 gi|452211527|ref|YP_007491641.1| - 0.14 13.0 0.1 0.32 11.8 0.1 1.6 1 0 0 1 1 1 0 AAA domain DUF3344 PF11824.3 gi|452211531|ref|YP_007491645.1| - 8.8e-142 471.2 38.5 9.6e-77 258.0 8.4 3.8 4 0 0 4 4 4 2 Protein of unknown function (DUF3344) CARDB PF07705.6 gi|452211531|ref|YP_007491645.1| - 3.5e-21 75.1 2.6 3.5e-21 75.1 1.8 4.3 4 1 0 4 4 4 1 CARDB Lactonase PF10282.4 gi|452211533|ref|YP_007491647.1| - 5.5e-18 65.1 8.9 1.2e-07 31.1 0.3 3.4 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|452211533|ref|YP_007491647.1| - 2.9e-16 58.7 10.0 9.4e-07 27.4 0.4 3.3 1 1 2 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.7 gi|452211533|ref|YP_007491647.1| - 1.7e-11 43.9 12.3 0.00093 18.6 1.8 4.7 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region Arylesterase PF01731.15 gi|452211533|ref|YP_007491647.1| - 5.4e-10 39.1 15.6 0.063 13.2 0.1 6.7 1 1 5 6 6 6 4 Arylesterase NHL PF01436.16 gi|452211533|ref|YP_007491647.1| - 7.2e-08 32.0 31.2 0.095 12.7 0.2 7.1 7 0 0 7 7 6 4 NHL repeat DUF1513 PF07433.6 gi|452211533|ref|YP_007491647.1| - 0.00027 19.9 5.4 0.0047 15.8 0.3 3.3 2 1 2 4 4 4 1 Protein of unknown function (DUF1513) PD40 PF07676.7 gi|452211533|ref|YP_007491647.1| - 0.00062 19.3 4.7 6.1 6.6 0.0 5.9 7 0 0 7 7 7 1 WD40-like Beta Propeller Repeat Str_synth PF03088.11 gi|452211533|ref|YP_007491647.1| - 0.0012 18.8 0.4 31 4.6 0.0 5.3 4 2 2 6 6 6 0 Strictosidine synthase CUB PF00431.15 gi|452211533|ref|YP_007491647.1| - 0.003 17.5 3.1 1.8 8.6 0.1 3.2 2 1 1 3 3 2 2 CUB domain Inh PF02974.9 gi|452211533|ref|YP_007491647.1| - 0.0035 16.8 0.0 4.2 7.0 0.0 3.1 2 0 0 2 2 2 2 Protease inhibitor Inh DUF4369 PF14289.1 gi|452211533|ref|YP_007491647.1| - 0.0053 16.7 13.7 12 5.9 0.1 6.3 5 1 0 6 6 6 0 Domain of unknown function (DUF4369) PBCV_basic_adap PF08789.5 gi|452211533|ref|YP_007491647.1| - 0.098 12.3 9.7 18 5.0 0.1 5.4 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain PQQ_3 PF13570.1 gi|452211533|ref|YP_007491647.1| - 0.37 11.1 29.8 8.4 6.8 0.7 6.5 6 0 0 6 6 6 0 PQQ-like domain CPSase_L_chain PF00289.17 gi|452211533|ref|YP_007491647.1| - 0.4 10.7 7.0 9.8 6.3 0.0 4.8 4 1 2 6 6 5 0 Carbamoyl-phosphate synthase L chain, N-terminal domain Tub_2 PF04525.7 gi|452211533|ref|YP_007491647.1| - 1 8.6 5.0 8.3 5.7 0.0 3.8 3 2 1 4 4 4 0 Tubby C 2 Pathogen_betaC1 PF09593.5 gi|452211534|ref|YP_007491648.1| - 0.075 12.7 0.1 0.075 12.7 0.1 1.0 1 0 0 1 1 1 0 Beta-satellite pathogenicity beta C1 protein dCMP_cyt_deam_1 PF00383.17 gi|452211535|ref|YP_007491649.1| - 1.4e-18 66.3 0.0 2.1e-18 65.8 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.1 gi|452211535|ref|YP_007491649.1| - 0.02 14.7 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase APOBEC_N PF08210.6 gi|452211535|ref|YP_007491649.1| - 0.059 12.9 0.0 0.35 10.4 0.0 1.9 1 1 1 2 2 2 0 APOBEC-like N-terminal domain XOO_2897-deam PF14440.1 gi|452211535|ref|YP_007491649.1| - 0.098 12.3 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase Glyoxalase_2 PF12681.2 gi|452211536|ref|YP_007491650.1| - 0.00042 20.8 0.0 0.00044 20.8 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|452211536|ref|YP_007491650.1| - 0.003 17.5 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CxxCxxCC PF03692.10 gi|452211539|ref|YP_007491653.1| - 4.4e-09 36.7 7.2 7.2e-09 36.0 4.7 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain zf-CDGSH PF09360.5 gi|452211540|ref|YP_007491654.1| - 2.3e-34 116.9 3.3 5e-17 61.4 0.0 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.6 gi|452211540|ref|YP_007491654.1| - 1.2e-12 47.4 0.0 3.2e-12 46.0 0.0 1.8 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster FrhB_FdhB_N PF04422.8 gi|452211541|ref|YP_007491655.1| - 5.8e-33 112.6 0.0 9.2e-33 111.9 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term FrhB_FdhB_C PF04432.8 gi|452211541|ref|YP_007491655.1| - 0.002 17.5 0.1 0.0031 16.9 0.1 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Oxidored_q6 PF01058.17 gi|452211542|ref|YP_007491656.1| - 3.5e-28 97.8 0.2 3.5e-28 97.8 0.1 2.3 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|452211542|ref|YP_007491656.1| - 1.1e-12 46.9 16.1 6.7e-08 31.8 2.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211542|ref|YP_007491656.1| - 4.1e-09 36.0 11.1 7.1e-09 35.3 6.4 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211542|ref|YP_007491656.1| - 6e-09 36.1 10.7 2.9e-08 33.9 6.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211542|ref|YP_007491656.1| - 2.1e-08 34.3 20.1 1.5e-07 31.5 7.3 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211542|ref|YP_007491656.1| - 2.5e-07 30.2 18.2 0.00046 19.9 2.5 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211542|ref|YP_007491656.1| - 3.7e-07 29.7 17.3 3.2e-05 23.6 1.7 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452211542|ref|YP_007491656.1| - 9.3e-07 28.6 12.9 0.0012 18.6 8.6 3.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211542|ref|YP_007491656.1| - 6.4e-06 26.0 18.0 0.0046 17.1 2.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211542|ref|YP_007491656.1| - 1.2e-05 25.2 13.4 0.00055 19.9 8.3 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211542|ref|YP_007491656.1| - 1.3e-05 25.7 8.8 0.0058 17.3 1.0 3.1 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|452211542|ref|YP_007491656.1| - 0.0011 19.2 15.1 0.076 13.3 1.4 3.3 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211542|ref|YP_007491656.1| - 0.014 15.7 18.9 0.083 13.3 3.5 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452211542|ref|YP_007491656.1| - 0.025 14.9 17.0 0.033 14.5 0.9 3.4 3 1 1 4 4 4 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452211542|ref|YP_007491656.1| - 0.37 11.4 24.6 0.36 11.5 4.9 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211542|ref|YP_007491656.1| - 0.93 10.1 21.3 0.5 10.9 0.5 3.8 4 1 0 4 4 3 0 4Fe-4S single cluster domain HycI PF01750.13 gi|452211543|ref|YP_007491657.1| - 8.3e-33 112.7 0.0 1e-32 112.3 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.14 gi|452211544|ref|YP_007491658.1| - 1.5e-24 86.6 8.3 3.4e-19 69.0 3.5 4.0 1 1 1 2 2 2 2 Nickel-dependent hydrogenase DDE_Tnp_1 PF01609.16 gi|452211545|ref|YP_007491659.1| - 7.7e-10 38.6 1.7 1.3e-09 37.9 1.2 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|452211545|ref|YP_007491659.1| - 0.0067 16.1 1.0 0.036 13.8 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|452211545|ref|YP_007491659.1| - 0.045 13.3 1.6 0.47 10.1 0.0 2.9 3 0 0 3 3 3 0 Paired amphipathic helix repeat Prenyltrans PF00432.16 gi|452211546|ref|YP_007491660.1| - 6.4e-07 28.8 0.0 1.1e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Prenyltransferase and squalene oxidase repeat Prenyltrans_1 PF13243.1 gi|452211546|ref|YP_007491660.1| - 1.1e-05 25.3 0.0 1.7e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Prenyltransferase-like Prenyltrans_2 PF13249.1 gi|452211546|ref|YP_007491660.1| - 6.8e-05 23.2 0.0 8.5e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Prenyltransferase-like A2M_comp PF07678.9 gi|452211546|ref|YP_007491660.1| - 0.011 15.0 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 A-macroglobulin complement component Pec_lyase PF09492.5 gi|452211546|ref|YP_007491660.1| - 0.14 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Pectic acid lyase LTD PF00932.14 gi|452211548|ref|YP_007491662.1| - 5.5e-24 84.4 2.4 5.5e-24 84.4 1.7 2.8 3 0 0 3 3 3 1 Lamin Tail Domain Lactamase_B PF00753.22 gi|452211548|ref|YP_007491662.1| - 6.7e-14 51.9 0.8 1.7e-13 50.7 0.5 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|452211548|ref|YP_007491662.1| - 3.3e-05 23.5 0.0 5.8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Inh PF02974.9 gi|452211548|ref|YP_007491662.1| - 0.0084 15.6 0.0 0.21 11.1 0.0 2.3 2 0 0 2 2 2 1 Protease inhibitor Inh Lactamase_B_3 PF13483.1 gi|452211548|ref|YP_007491662.1| - 0.015 15.0 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF3006 PF11213.3 gi|452211549|ref|YP_007491663.1| - 5.4e-22 77.3 1.1 6e-22 77.1 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) DUF904 PF06005.7 gi|452211549|ref|YP_007491663.1| - 0.041 14.1 0.2 0.045 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF904) FMN_red PF03358.10 gi|452211550|ref|YP_007491664.1| - 1.2e-28 99.5 0.0 1.4e-28 99.3 0.0 1.0 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452211550|ref|YP_007491664.1| - 1.2e-14 54.3 0.0 1.7e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold DUF4460 PF14687.1 gi|452211550|ref|YP_007491664.1| - 0.081 12.6 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Peptidase_S8 PF00082.17 gi|452211556|ref|YP_007491670.1| - 8.4e-12 44.8 0.6 5e-08 32.4 0.0 2.0 1 1 1 2 2 2 2 Subtilase family GPW_gp25 PF04965.9 gi|452211557|ref|YP_007491671.1| - 0.0031 17.0 0.2 0.38 10.3 0.0 2.1 1 1 1 2 2 2 2 Gene 25-like lysozyme Fumerase PF05681.9 gi|452211561|ref|YP_007491675.1| - 3.9e-98 327.8 0.0 4.3e-98 327.6 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DBI_PRT PF02277.12 gi|452211561|ref|YP_007491675.1| - 0.049 12.7 0.1 0.092 11.8 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyltransferase Fumerase_C PF05683.7 gi|452211562|ref|YP_007491676.1| - 8.3e-54 181.8 0.0 9.3e-54 181.6 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus DUF1724 PF08350.5 gi|452211563|ref|YP_007491677.1| - 7.8e-16 57.3 0.0 2.1e-15 55.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|452211563|ref|YP_007491677.1| - 1.4e-05 24.6 0.0 2.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452211563|ref|YP_007491677.1| - 0.00031 20.4 0.0 0.00059 19.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|452211563|ref|YP_007491677.1| - 0.0047 16.5 0.0 0.01 15.4 0.0 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.15 gi|452211563|ref|YP_007491677.1| - 0.055 13.5 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator DUF4539 PF15072.1 gi|452211563|ref|YP_007491677.1| - 0.067 12.8 0.0 1.3 8.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4539) E1-E2_ATPase PF00122.15 gi|452211564|ref|YP_007491678.1| - 9.9e-62 207.9 5.1 9.9e-62 207.9 3.5 3.2 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|452211564|ref|YP_007491678.1| - 1.5e-32 113.7 0.2 8.7e-32 111.2 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.16 gi|452211564|ref|YP_007491678.1| - 2.1e-31 108.8 4.6 2.1e-31 108.8 3.2 2.6 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase_like2 PF13246.1 gi|452211564|ref|YP_007491678.1| - 6.2e-19 67.7 0.0 1.2e-18 66.8 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|452211564|ref|YP_007491678.1| - 2.3e-15 57.2 0.0 5.4e-15 56.0 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|452211564|ref|YP_007491678.1| - 1.1e-05 25.1 2.4 0.0014 18.2 0.9 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase TMEM125 PF15109.1 gi|452211564|ref|YP_007491678.1| - 0.0088 16.1 0.2 0.026 14.6 0.2 1.7 1 0 0 1 1 1 1 TMEM125 protein family PPK2 PF03976.9 gi|452211566|ref|YP_007491680.1| - 2.1e-65 220.1 3.6 3.7e-65 219.4 2.5 1.3 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) DUF308 PF03729.8 gi|452211567|ref|YP_007491681.1| - 3.9e-21 74.8 55.9 2.1e-11 43.6 14.5 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) Herpes_UL73 PF03554.8 gi|452211567|ref|YP_007491681.1| - 1.3 8.9 5.9 4 7.3 0.1 3.0 2 1 1 3 3 3 0 UL73 viral envelope glycoprotein NosD PF05048.8 gi|452211568|ref|YP_007491682.1| - 3e-95 317.8 117.6 1.8e-47 161.4 27.4 4.2 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452211568|ref|YP_007491682.1| - 1.3e-48 164.7 175.6 1.1e-12 47.9 17.9 5.0 1 1 5 6 6 6 6 Right handed beta helix region Peptidase_C1 PF00112.18 gi|452211568|ref|YP_007491682.1| - 2.5e-20 73.3 0.0 5e-20 72.3 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.15 gi|452211568|ref|YP_007491682.1| - 7e-16 57.7 1.3 2.4e-15 56.0 0.9 1.9 1 0 0 1 1 1 1 PKD domain DUF367 PF04034.8 gi|452211569|ref|YP_007491683.1| - 3e-46 156.1 0.0 3.7e-46 155.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|452211569|ref|YP_007491683.1| - 5.8e-15 54.5 0.2 5.8e-15 54.5 0.1 1.8 2 0 0 2 2 2 1 Possible Fer4-like domain in RNase L inhibitor, RLI DNA_processg_A PF02481.10 gi|452211570|ref|YP_007491684.1| - 1.3e-09 37.2 0.4 6.8e-07 28.4 0.3 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.9 gi|452211570|ref|YP_007491684.1| - 2.5e-08 33.8 0.0 2.5e-08 33.8 0.0 1.6 2 0 0 2 2 2 1 Possible lysine decarboxylase Topoisom_bac PF01131.15 gi|452211571|ref|YP_007491685.1| - 9.6e-115 383.6 0.0 1.3e-114 383.2 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.17 gi|452211571|ref|YP_007491685.1| - 1e-16 60.7 1.2 1.7e-16 60.0 0.1 2.0 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.14 gi|452211571|ref|YP_007491685.1| - 1.4e-14 53.2 4.8 2.2e-14 52.6 0.9 2.4 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.1 gi|452211571|ref|YP_007491685.1| - 3.6e-07 30.2 0.6 3.6e-07 30.2 0.4 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.3 gi|452211571|ref|YP_007491685.1| - 9.4e-06 25.4 0.1 3e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 Pathogenicity locus DUF4332 PF14229.1 gi|452211571|ref|YP_007491685.1| - 0.00038 20.4 0.0 0.00092 19.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) TfoX_C PF04994.8 gi|452211571|ref|YP_007491685.1| - 0.001 18.8 0.0 0.003 17.4 0.0 1.7 1 0 0 1 1 1 1 TfoX C-terminal domain HEXIM PF15313.1 gi|452211571|ref|YP_007491685.1| - 0.024 14.8 0.6 9.1 6.4 0.0 2.5 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein EF-hand_7 PF13499.1 gi|452211571|ref|YP_007491685.1| - 0.04 14.0 0.3 0.31 11.2 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain pair HEM4 PF02602.10 gi|452211571|ref|YP_007491685.1| - 0.11 11.7 0.2 0.22 10.7 0.1 1.4 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Baculo_E56 PF04639.7 gi|452211573|ref|YP_007491687.1| - 0.0068 15.1 0.6 0.0068 15.1 0.4 1.0 1 0 0 1 1 1 1 Baculoviral E56 protein, specific to ODV envelope DUF3816 PF12822.2 gi|452211573|ref|YP_007491687.1| - 0.034 14.0 0.7 0.034 14.0 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) MpPF26 PF07666.6 gi|452211573|ref|YP_007491687.1| - 0.035 14.0 0.9 0.037 13.9 0.6 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 26 ACR_tran PF00873.14 gi|452211573|ref|YP_007491687.1| - 0.045 11.1 0.1 0.043 11.2 0.1 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family BatA PF07584.6 gi|452211573|ref|YP_007491687.1| - 0.23 11.6 1.9 0.27 11.4 1.3 1.3 1 1 0 1 1 1 0 Aerotolerance regulator N-terminal SKG6 PF08693.5 gi|452211573|ref|YP_007491687.1| - 2.9 7.3 6.2 0.28 10.5 1.4 1.6 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Usp PF00582.21 gi|452211574|ref|YP_007491688.1| - 4e-39 133.9 0.5 4.5e-39 133.8 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family Dynamin_N PF00350.18 gi|452211574|ref|YP_007491688.1| - 0.064 13.0 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 Dynamin family Beta-Casp PF10996.3 gi|452211575|ref|YP_007491689.1| - 2.5e-22 79.1 0.0 7.9e-22 77.5 0.0 1.8 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B_2 PF12706.2 gi|452211575|ref|YP_007491689.1| - 1.7e-12 47.3 0.0 3e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|452211575|ref|YP_007491689.1| - 4.6e-11 42.7 0.8 2.3e-10 40.4 0.4 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|452211575|ref|YP_007491689.1| - 5.9e-10 38.7 0.0 2.2e-09 36.9 0.0 2.0 2 0 0 2 2 2 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|452211575|ref|YP_007491689.1| - 0.00012 21.7 0.0 0.0004 20.1 0.0 1.9 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF3237 PF11578.3 gi|452211576|ref|YP_007491690.1| - 0.021 14.1 0.0 0.037 13.3 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3237) DUF460 PF04312.8 gi|452211577|ref|YP_007491691.1| - 6.5e-46 155.2 0.1 1.9e-45 153.7 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) Reo_sigmaC PF04582.7 gi|452211577|ref|YP_007491691.1| - 0.005 16.0 0.6 0.017 14.2 0.5 1.7 1 1 1 2 2 2 1 Reovirus sigma C capsid protein DUF677 PF05055.7 gi|452211577|ref|YP_007491691.1| - 0.0065 15.1 7.1 0.012 14.3 4.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF677) Herpes_UL6 PF01763.11 gi|452211577|ref|YP_007491691.1| - 0.087 10.9 7.6 0.13 10.3 5.3 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like AAA_13 PF13166.1 gi|452211577|ref|YP_007491691.1| - 0.3 9.4 13.3 0.49 8.7 9.2 1.3 1 0 0 1 1 1 0 AAA domain SlyX PF04102.7 gi|452211577|ref|YP_007491691.1| - 0.4 11.0 7.8 11 6.4 0.2 2.9 1 1 1 2 2 2 0 SlyX V_ATPase_I PF01496.14 gi|452211577|ref|YP_007491691.1| - 0.43 8.3 9.4 0.69 7.6 6.5 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BLOC1_2 PF10046.4 gi|452211577|ref|YP_007491691.1| - 0.52 10.4 8.1 0.19 11.9 0.4 2.5 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fib_alpha PF08702.5 gi|452211577|ref|YP_007491691.1| - 0.85 9.7 14.5 0.92 9.6 8.8 1.9 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.7 gi|452211577|ref|YP_007491691.1| - 1 9.1 7.1 2.6 7.8 4.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) L31 PF09784.4 gi|452211577|ref|YP_007491691.1| - 1.2 9.2 12.2 2.5 8.1 1.0 3.0 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 TMF_DNA_bd PF12329.3 gi|452211577|ref|YP_007491691.1| - 1.6 8.5 23.9 0.051 13.3 2.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding ACCA PF03255.9 gi|452211577|ref|YP_007491691.1| - 1.6 8.2 8.5 0.39 10.2 1.7 2.9 3 1 1 4 4 4 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Spc7 PF08317.6 gi|452211577|ref|YP_007491691.1| - 2.5 6.6 17.5 1.5 7.4 4.8 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.6 gi|452211577|ref|YP_007491691.1| - 2.9 7.8 8.1 5.6 6.9 0.3 3.6 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF641 PF04859.7 gi|452211577|ref|YP_007491691.1| - 3.3 7.4 19.8 0.11 12.2 2.8 3.0 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) TMPIT PF07851.8 gi|452211577|ref|YP_007491691.1| - 3.4 6.6 10.0 5.5 5.9 6.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein RIO1 PF01163.17 gi|452211578|ref|YP_007491692.1| - 1.9e-43 148.0 0.1 1.9e-43 148.0 0.1 1.5 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.6 gi|452211578|ref|YP_007491692.1| - 4.5e-29 100.3 0.0 9.9e-29 99.2 0.0 1.6 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.20 gi|452211578|ref|YP_007491692.1| - 2e-05 23.8 0.0 4.6e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|452211578|ref|YP_007491692.1| - 0.00027 20.7 0.1 0.01 15.5 0.0 2.5 2 1 1 3 3 3 1 Phosphotransferase enzyme family Tbf5 PF06331.7 gi|452211578|ref|YP_007491692.1| - 0.099 12.4 0.4 1.3 8.8 0.0 2.8 2 0 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 AAA_11 PF13086.1 gi|452211578|ref|YP_007491692.1| - 2.7 7.4 5.6 32 3.9 3.9 2.1 1 1 0 1 1 1 0 AAA domain LRR_5 PF13306.1 gi|452211579|ref|YP_007491693.1| - 0.0056 16.3 0.1 0.011 15.4 0.1 1.4 1 0 0 1 1 1 1 Leucine rich repeats (6 copies) PKD PF00801.15 gi|452211579|ref|YP_007491693.1| - 0.052 13.2 0.2 0.11 12.2 0.1 1.6 1 0 0 1 1 1 0 PKD domain LRR_6 PF13516.1 gi|452211579|ref|YP_007491693.1| - 1.7 8.9 11.5 1.9 8.8 0.6 5.4 4 2 0 4 4 4 0 Leucine Rich repeat LRR_4 PF12799.2 gi|452211579|ref|YP_007491693.1| - 5.5 6.7 13.6 0.69 9.6 0.5 4.7 4 2 0 4 4 4 0 Leucine Rich repeats (2 copies) DJ-1_PfpI PF01965.19 gi|452211585|ref|YP_007491699.1| - 3.1e-40 137.0 0.0 3.6e-40 136.7 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|452211585|ref|YP_007491699.1| - 2.2e-13 49.7 0.0 2.7e-13 49.5 0.0 1.0 1 0 0 1 1 1 1 Putative amidotransferase GATase PF00117.23 gi|452211585|ref|YP_007491699.1| - 2e-05 24.1 0.0 2.3e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|452211585|ref|YP_007491699.1| - 0.0092 15.5 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|452211585|ref|YP_007491699.1| - 0.028 13.8 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 GATase_5 PF13507.1 gi|452211585|ref|YP_007491699.1| - 0.038 12.8 0.0 0.064 12.1 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Cys_Met_Meta_PP PF01053.15 gi|452211586|ref|YP_007491700.1| - 4.6e-151 502.5 0.0 5.2e-151 502.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|452211586|ref|YP_007491700.1| - 3.6e-08 32.7 0.1 5.3e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.6 gi|452211586|ref|YP_007491700.1| - 4.3e-06 25.2 0.1 6e-05 21.5 0.1 2.0 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.14 gi|452211586|ref|YP_007491700.1| - 1.9e-05 23.5 0.0 3.2e-05 22.8 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|452211586|ref|YP_007491700.1| - 0.0055 15.8 0.1 0.017 14.2 0.1 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase NAPRTase PF04095.11 gi|452211587|ref|YP_007491701.1| - 3.1e-44 151.0 0.2 1.6e-43 148.7 0.1 1.9 1 1 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family PD40 PF07676.7 gi|452211590|ref|YP_007491704.1| - 1.9e-26 91.2 13.0 2e-14 52.8 0.6 5.0 4 0 0 4 4 4 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|452211590|ref|YP_007491704.1| - 7.6e-06 24.7 1.6 0.0015 17.2 0.3 3.8 1 1 3 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.1 gi|452211590|ref|YP_007491704.1| - 0.00051 18.6 0.4 0.66 8.3 0.0 3.3 3 1 1 4 4 4 3 Oligogalacturonate lyase Lipocalin_3 PF12702.2 gi|452211590|ref|YP_007491704.1| - 0.019 14.9 0.1 0.45 10.5 0.0 2.8 2 0 0 2 2 2 0 Lipocalin-like Hexapep PF00132.19 gi|452211591|ref|YP_007491705.1| - 7.8e-13 47.2 3.1 0.00094 18.5 0.0 4.6 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452211591|ref|YP_007491705.1| - 1.6e-07 30.7 1.4 0.0046 16.4 0.0 4.6 5 0 0 5 5 5 2 Hexapeptide repeat of succinyl-transferase HEAT_2 PF13646.1 gi|452211593|ref|YP_007491707.1| - 1.1e-92 304.4 24.1 1.6e-17 63.5 1.4 7.0 1 1 6 7 7 7 7 HEAT repeats HEAT PF02985.17 gi|452211593|ref|YP_007491707.1| - 7.8e-48 156.3 0.3 0.00016 21.4 0.0 12.7 13 0 0 13 13 13 10 HEAT repeat HEAT_PBS PF03130.11 gi|452211593|ref|YP_007491707.1| - 1.7e-45 148.8 23.3 0.0037 17.5 0.1 14.1 14 0 0 14 14 14 11 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|452211593|ref|YP_007491707.1| - 7.2e-40 134.5 21.1 0.0024 18.2 0.1 12.4 8 3 4 12 12 12 8 HEAT-like repeat Arm PF00514.18 gi|452211593|ref|YP_007491707.1| - 8.2e-17 60.3 4.0 0.21 11.4 0.0 9.3 8 2 2 10 10 9 3 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|452211593|ref|YP_007491707.1| - 1.5e-11 43.3 0.1 3.9e-07 28.7 0.0 5.4 1 1 2 3 3 3 3 Adaptin N terminal region Cnd1 PF12717.2 gi|452211593|ref|YP_007491707.1| - 9.7e-09 35.3 0.5 12 5.6 0.0 8.1 4 3 4 8 8 8 0 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.2 gi|452211593|ref|YP_007491707.1| - 3e-06 27.5 0.0 6.7 7.1 0.0 6.8 4 1 2 7 7 6 0 Vacuolar 14 Fab1-binding region Cohesin_HEAT PF12765.2 gi|452211593|ref|YP_007491707.1| - 2e-05 24.4 3.6 7.4 6.6 0.0 6.0 6 0 0 6 6 6 0 HEAT repeat associated with sister chromatid cohesion CLASP_N PF12348.3 gi|452211593|ref|YP_007491707.1| - 0.0002 20.8 0.0 13 5.0 0.0 5.0 6 0 0 6 6 5 0 CLASP N terminal PPR_3 PF13812.1 gi|452211593|ref|YP_007491707.1| - 0.00025 21.0 0.1 17 6.0 0.0 6.7 9 0 0 9 9 6 0 Pentatricopeptide repeat domain Aconitase_B_N PF11791.3 gi|452211593|ref|YP_007491707.1| - 0.00033 20.5 6.0 1.5 8.6 0.0 6.1 3 1 6 9 9 9 1 Aconitate B N-terminal domain RasGEF_N_2 PF14663.1 gi|452211593|ref|YP_007491707.1| - 0.0017 18.3 1.4 67 3.4 0.0 5.6 4 2 2 7 7 7 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF1641 PF07849.6 gi|452211593|ref|YP_007491707.1| - 0.0026 17.3 7.6 35 4.1 0.0 7.2 7 1 0 7 7 7 0 Protein of unknown function (DUF1641) DUF1546 PF07571.8 gi|452211593|ref|YP_007491707.1| - 0.0047 17.0 0.3 2.6 8.2 0.0 4.6 4 1 1 5 5 5 1 Protein of unknown function (DUF1546) Cnd3 PF12719.2 gi|452211593|ref|YP_007491707.1| - 0.0057 15.6 0.4 11 4.8 0.0 5.0 3 1 0 5 5 5 0 Nuclear condensing complex subunits, C-term domain CHAD PF05235.9 gi|452211593|ref|YP_007491707.1| - 0.0096 15.5 5.6 0.37 10.3 3.0 3.0 2 1 0 2 2 2 1 CHAD domain Pex19 PF04614.7 gi|452211593|ref|YP_007491707.1| - 0.013 15.1 0.1 3.2 7.2 0.0 2.3 2 0 0 2 2 2 0 Pex19 protein family Proteasom_PSMB PF10508.4 gi|452211593|ref|YP_007491707.1| - 0.016 13.4 0.5 0.14 10.4 0.1 2.6 2 1 0 2 2 2 0 Proteasome non-ATPase 26S subunit ERAP1_C PF11838.3 gi|452211593|ref|YP_007491707.1| - 0.016 14.4 0.6 0.34 10.1 0.0 2.8 3 0 0 3 3 3 0 ERAP1-like C-terminal domain RICTOR_V PF14668.1 gi|452211593|ref|YP_007491707.1| - 0.058 13.3 0.0 6.6 6.7 0.0 3.3 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 Urease_alpha PF00449.15 gi|452211593|ref|YP_007491707.1| - 0.11 12.6 0.6 16 5.6 0.0 3.9 3 2 2 5 5 5 0 Urease alpha-subunit, N-terminal domain Ndc80_HEC PF03801.8 gi|452211593|ref|YP_007491707.1| - 0.16 11.3 0.0 4 6.8 0.0 3.0 4 0 0 4 4 4 0 HEC/Ndc80p family zf-AD PF07776.10 gi|452211595|ref|YP_007491709.1| - 0.027 14.4 0.3 0.41 10.6 0.0 2.6 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF2275 PF10039.4 gi|452211595|ref|YP_007491709.1| - 0.03 14.2 1.1 0.036 13.9 0.2 1.6 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2275) CAMP_factor PF07373.6 gi|452211595|ref|YP_007491709.1| - 0.044 13.2 9.8 0.3 10.5 0.1 3.2 2 1 1 3 3 3 0 CAMP factor (Cfa) DUF2762 PF10960.3 gi|452211595|ref|YP_007491709.1| - 0.46 10.2 2.4 4.6 7.0 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2762) Reo_sigmaC PF04582.7 gi|452211595|ref|YP_007491709.1| - 0.5 9.5 10.7 0.051 12.7 3.7 1.8 2 0 0 2 2 2 0 Reovirus sigma C capsid protein FlaC_arch PF05377.6 gi|452211595|ref|YP_007491709.1| - 0.83 9.5 11.6 0.19 11.6 0.5 3.4 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Syntaxin-6_N PF09177.6 gi|452211595|ref|YP_007491709.1| - 1 9.8 4.5 38 4.7 0.0 3.3 2 1 0 2 2 2 0 Syntaxin 6, N-terminal Fib_alpha PF08702.5 gi|452211595|ref|YP_007491709.1| - 2.6 8.1 8.1 3.7 7.6 0.3 2.7 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Osmo_CC PF08946.5 gi|452211595|ref|YP_007491709.1| - 3.3 7.8 6.2 26 4.9 0.1 3.2 3 0 0 3 3 3 0 Osmosensory transporter coiled coil IncA PF04156.9 gi|452211595|ref|YP_007491709.1| - 5 6.6 11.2 0.83 9.2 1.9 2.5 2 1 0 2 2 2 0 IncA protein FlxA PF14282.1 gi|452211595|ref|YP_007491709.1| - 5.4 7.0 12.3 4.4 7.2 0.7 3.3 2 1 1 3 3 3 0 FlxA-like protein AAA_13 PF13166.1 gi|452211595|ref|YP_007491709.1| - 5.5 5.3 9.4 13 4.1 6.5 1.6 1 1 0 1 1 1 0 AAA domain NPV_P10 PF05531.7 gi|452211595|ref|YP_007491709.1| - 6 7.1 12.4 5.4 7.3 0.3 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.7 gi|452211595|ref|YP_007491709.1| - 9.2 6.0 8.5 1.2 8.8 0.5 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) HTH_20 PF12840.2 gi|452211596|ref|YP_007491710.1| - 7.6e-13 48.0 0.1 1.1e-12 47.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|452211596|ref|YP_007491710.1| - 2.3e-05 23.6 1.9 2.3e-05 23.6 1.3 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|452211596|ref|YP_007491710.1| - 0.00019 21.0 0.6 0.00045 19.8 0.4 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|452211596|ref|YP_007491710.1| - 0.0026 17.4 0.4 0.0026 17.4 0.3 2.4 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.1 gi|452211596|ref|YP_007491710.1| - 0.0041 16.7 0.1 0.058 13.0 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain TFIIE_alpha PF02002.12 gi|452211596|ref|YP_007491710.1| - 0.0052 16.2 1.1 0.0068 15.8 0.7 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.2 gi|452211596|ref|YP_007491710.1| - 0.013 15.1 0.2 0.023 14.3 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_30 PF13556.1 gi|452211596|ref|YP_007491710.1| - 0.029 13.9 0.0 0.051 13.1 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|452211596|ref|YP_007491710.1| - 0.03 13.7 0.2 0.23 10.9 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.10 gi|452211596|ref|YP_007491710.1| - 0.032 14.1 0.1 0.13 12.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.1 gi|452211596|ref|YP_007491710.1| - 0.036 13.6 0.1 0.086 12.4 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain DUF742 PF05331.6 gi|452211596|ref|YP_007491710.1| - 0.12 11.9 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF742) CarboxypepD_reg PF13620.1 gi|452211598|ref|YP_007491712.1| - 3.2e-06 27.0 0.0 6e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|452211598|ref|YP_007491712.1| - 8.4e-05 22.5 0.2 0.00032 20.6 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4480) MarR_2 PF12802.2 gi|452211598|ref|YP_007491712.1| - 0.001 18.6 0.0 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|452211598|ref|YP_007491712.1| - 0.0013 18.3 0.1 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452211598|ref|YP_007491712.1| - 0.0023 17.2 0.5 0.0037 16.6 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|452211598|ref|YP_007491712.1| - 0.063 13.6 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain FeoC PF09012.5 gi|452211598|ref|YP_007491712.1| - 0.079 12.6 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator ABC_tran PF00005.22 gi|452211600|ref|YP_007491714.1| - 9.6e-32 110.1 0.0 1.5e-31 109.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|452211600|ref|YP_007491714.1| - 2.8e-12 47.2 1.2 2.8e-12 47.2 0.8 2.4 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|452211600|ref|YP_007491714.1| - 3.3e-07 29.7 0.0 1.5e-06 27.6 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|452211600|ref|YP_007491714.1| - 0.00032 20.9 1.4 0.046 14.0 1.0 2.5 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|452211600|ref|YP_007491714.1| - 0.00043 19.8 0.0 0.00063 19.2 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain AAA_29 PF13555.1 gi|452211600|ref|YP_007491714.1| - 0.00052 19.4 0.0 0.0012 18.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|452211600|ref|YP_007491714.1| - 0.00072 20.3 0.5 0.0041 17.9 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|452211600|ref|YP_007491714.1| - 0.001 19.0 0.5 0.0036 17.3 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|452211600|ref|YP_007491714.1| - 0.0014 17.8 0.0 0.0027 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|452211600|ref|YP_007491714.1| - 0.0015 17.6 0.3 0.043 12.8 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_14 PF13173.1 gi|452211600|ref|YP_007491714.1| - 0.0017 18.2 0.0 0.0042 16.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|452211600|ref|YP_007491714.1| - 0.0041 16.8 0.2 0.018 14.7 0.1 2.2 1 1 1 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|452211600|ref|YP_007491714.1| - 0.0075 16.4 0.1 0.029 14.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|452211600|ref|YP_007491714.1| - 0.0082 15.5 0.0 0.024 14.0 0.0 1.8 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|452211600|ref|YP_007491714.1| - 0.01 15.7 0.4 0.037 13.9 0.3 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_13 PF13166.1 gi|452211600|ref|YP_007491714.1| - 0.014 13.8 0.0 1.2 7.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|452211600|ref|YP_007491714.1| - 0.019 14.8 0.0 0.031 14.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|452211600|ref|YP_007491714.1| - 0.072 11.9 0.0 0.12 11.2 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.17 gi|452211600|ref|YP_007491714.1| - 0.073 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 RNA helicase G-alpha PF00503.15 gi|452211600|ref|YP_007491714.1| - 0.1 11.2 0.0 0.13 10.8 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_23 PF13476.1 gi|452211600|ref|YP_007491714.1| - 0.14 12.4 2.6 0.2 11.9 0.0 2.3 2 2 0 2 2 2 0 AAA domain NPCBM_assoc PF10633.4 gi|452211601|ref|YP_007491715.1| - 8.6e-12 44.9 0.8 0.00042 20.3 0.0 4.4 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|452211601|ref|YP_007491715.1| - 8.9e-09 35.2 8.0 0.00019 21.4 0.9 3.5 3 0 0 3 3 3 2 Domain of unknown function DUF11 CARDB PF07705.6 gi|452211601|ref|YP_007491715.1| - 6.8e-08 32.4 11.9 0.0068 16.4 0.4 3.9 2 1 1 3 3 3 3 CARDB A2M_N PF01835.14 gi|452211601|ref|YP_007491715.1| - 0.00073 19.7 0.7 0.017 15.3 0.0 3.1 3 1 0 3 3 3 1 MG2 domain DUF4469 PF14734.1 gi|452211601|ref|YP_007491715.1| - 0.016 15.1 1.4 0.092 12.6 0.1 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4469) with IG-like fold DUF4366 PF14283.1 gi|452211601|ref|YP_007491715.1| - 0.036 13.5 0.7 0.072 12.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4366) Guanylate_kin PF00625.16 gi|452211601|ref|YP_007491715.1| - 0.057 12.8 0.1 0.11 11.9 0.1 1.4 1 0 0 1 1 1 0 Guanylate kinase OsmC PF02566.14 gi|452211601|ref|YP_007491715.1| - 0.11 12.7 0.0 0.71 10.0 0.0 2.3 2 0 0 2 2 2 0 OsmC-like protein DUF2271 PF10029.4 gi|452211601|ref|YP_007491715.1| - 0.46 9.9 2.7 2.7 7.4 0.0 3.1 3 0 0 3 3 3 0 Predicted periplasmic protein (DUF2271) MacB_PCD PF12704.2 gi|452211602|ref|YP_007491716.1| - 5.7e-45 153.7 3.0 5.7e-45 153.7 2.1 2.6 3 0 0 3 3 3 2 MacB-like periplasmic core domain FtsX PF02687.16 gi|452211602|ref|YP_007491716.1| - 4.4e-23 81.3 16.3 3.1e-22 78.5 7.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family DUF4134 PF13572.1 gi|452211602|ref|YP_007491716.1| - 0.026 14.6 1.2 0.026 14.6 0.8 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF4134) Yip1 PF04893.12 gi|452211602|ref|YP_007491716.1| - 0.26 10.7 15.9 0.72 9.3 8.2 2.3 2 0 0 2 2 2 0 Yip1 domain Transglut_core PF01841.14 gi|452211603|ref|YP_007491717.1| - 0.00034 20.8 0.0 0.00073 19.7 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily CHASE4 PF05228.8 gi|452211604|ref|YP_007491718.1| - 9.2e-42 142.3 0.0 1.5e-41 141.6 0.0 1.4 1 0 0 1 1 1 1 CHASE4 domain HATPase_c PF02518.21 gi|452211604|ref|YP_007491718.1| - 7.4e-32 109.3 0.1 1.3e-31 108.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452211604|ref|YP_007491718.1| - 5.2e-20 71.2 0.2 4.6e-19 68.1 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|452211604|ref|YP_007491718.1| - 3.8e-06 26.8 0.0 0.0029 17.6 0.0 2.4 2 0 0 2 2 2 2 PAS fold HATPase_c_5 PF14501.1 gi|452211604|ref|YP_007491718.1| - 7.4e-06 25.5 0.1 4.4e-05 23.1 0.0 2.3 3 0 0 3 3 3 1 GHKL domain HATPase_c_3 PF13589.1 gi|452211604|ref|YP_007491718.1| - 0.033 13.8 0.1 0.063 12.9 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|452211604|ref|YP_007491718.1| - 0.042 13.6 0.0 0.082 12.6 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain CxxCxxCC PF03692.10 gi|452211605|ref|YP_007491719.1| - 2.9e-06 27.6 1.6 9.3e-06 26.0 0.5 2.2 2 1 1 3 3 3 1 Putative zinc- or iron-chelating domain Kri1_C PF12936.2 gi|452211605|ref|YP_007491719.1| - 0.11 12.5 0.0 0.26 11.2 0.0 1.6 2 0 0 2 2 2 0 KRI1-like family C-terminal CHASE4 PF05228.8 gi|452211606|ref|YP_007491720.1| - 1.7e-39 134.9 0.0 4.2e-39 133.7 0.0 1.7 1 0 0 1 1 1 1 CHASE4 domain HATPase_c PF02518.21 gi|452211606|ref|YP_007491720.1| - 1.5e-32 111.6 0.1 3.3e-32 110.5 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452211606|ref|YP_007491720.1| - 1.8e-21 75.8 0.0 7.1e-21 73.9 0.0 2.1 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|452211606|ref|YP_007491720.1| - 1.9e-14 53.5 0.0 3.9e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|452211606|ref|YP_007491720.1| - 2.9e-08 34.0 0.0 1.2e-07 32.0 0.0 2.2 2 0 0 2 2 1 1 PAS domain HATPase_c_5 PF14501.1 gi|452211606|ref|YP_007491720.1| - 4.3e-06 26.3 0.2 0.00012 21.6 0.0 2.8 1 1 1 2 2 2 1 GHKL domain PAS_10 PF13596.1 gi|452211606|ref|YP_007491720.1| - 0.00046 20.4 0.0 0.0019 18.4 0.0 2.1 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.1 gi|452211606|ref|YP_007491720.1| - 0.0048 16.5 0.0 0.013 15.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|452211606|ref|YP_007491720.1| - 0.0061 16.3 0.1 0.029 14.2 0.0 2.2 2 0 0 2 2 2 1 PAS domain HAMP PF00672.20 gi|452211606|ref|YP_007491720.1| - 0.012 15.7 0.0 0.035 14.2 0.0 1.7 1 0 0 1 1 1 0 HAMP domain STN1_2 PF09170.5 gi|452211606|ref|YP_007491720.1| - 0.021 14.5 1.6 0.07 12.8 0.2 2.3 2 0 0 2 2 2 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 PAS PF00989.19 gi|452211606|ref|YP_007491720.1| - 0.094 12.4 0.1 2.8 7.7 0.0 3.2 2 1 0 2 2 2 0 PAS fold H_kinase_N PF12282.3 gi|452211606|ref|YP_007491720.1| - 0.12 11.9 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 Signal transduction histidine kinase Ly49 PF08391.5 gi|452211606|ref|YP_007491720.1| - 0.63 10.1 3.6 22 5.2 0.0 3.0 3 0 0 3 3 3 0 Ly49-like protein, N-terminal region DUF1638 PF07796.6 gi|452211607|ref|YP_007491721.1| - 7.6e-42 142.7 0.0 1e-41 142.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) FG-GAP PF01839.18 gi|452211609|ref|YP_007491723.1| - 0.12 12.0 0.0 0.34 10.6 0.0 1.8 1 1 0 1 1 1 0 FG-GAP repeat Pyridox_oxidase PF01243.15 gi|452211610|ref|YP_007491724.1| - 3.5e-20 71.8 0.0 4.3e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxase_2 PF12766.2 gi|452211610|ref|YP_007491724.1| - 0.019 15.2 0.0 0.028 14.7 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|452211610|ref|YP_007491724.1| - 0.087 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) dCMP_cyt_deam_1 PF00383.17 gi|452211611|ref|YP_007491725.1| - 7.4e-12 44.8 0.0 1.1e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region DDE_Tnp_IS66_C PF13817.1 gi|452211611|ref|YP_007491725.1| - 0.048 13.6 0.5 0.097 12.6 0.3 1.5 1 0 0 1 1 1 0 IS66 C-terminal element Fasciclin PF02469.17 gi|452211612|ref|YP_007491726.1| - 2.4e-37 127.8 0.0 3.3e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 Fasciclin domain Gram_pos_anchor PF00746.16 gi|452211612|ref|YP_007491726.1| - 2 8.2 6.9 5.6 6.8 0.6 2.6 2 0 0 2 2 2 0 Gram positive anchor Pyridox_oxidase PF01243.15 gi|452211613|ref|YP_007491727.1| - 6.1e-22 77.4 0.0 8.3e-22 77.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|452211613|ref|YP_007491727.1| - 5e-08 32.8 0.0 6.8e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.1 gi|452211613|ref|YP_007491727.1| - 0.0039 16.9 0.0 0.0061 16.3 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Exonuc_VIII PF06630.6 gi|452211613|ref|YP_007491727.1| - 0.066 12.5 0.1 6.6 6.0 0.0 2.1 2 0 0 2 2 2 0 Enterobacterial exodeoxyribonuclease VIII DUF2846 PF11008.3 gi|452211613|ref|YP_007491727.1| - 0.078 12.8 0.0 0.15 11.8 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2846) PAS_3 PF08447.6 gi|452211614|ref|YP_007491728.1| - 2.2e-17 62.9 0.3 3.4e-17 62.3 0.2 1.3 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.1 gi|452211614|ref|YP_007491728.1| - 6.5e-14 52.6 0.0 1.3e-13 51.6 0.0 1.4 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.1 gi|452211614|ref|YP_007491728.1| - 1e-06 28.8 0.0 1.6e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.1 gi|452211614|ref|YP_007491728.1| - 0.00036 20.8 0.1 0.00067 20.0 0.1 1.4 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|452211614|ref|YP_007491728.1| - 0.0017 18.3 0.0 0.0029 17.6 0.0 1.3 1 0 0 1 1 1 1 PAS fold Phosphorylase PF00343.15 gi|452211615|ref|YP_007491729.1| - 3.7e-23 81.3 0.0 9.7e-17 60.1 0.0 3.0 3 0 0 3 3 3 2 Carbohydrate phosphorylase Glyco_transf_5 PF08323.6 gi|452211615|ref|YP_007491729.1| - 0.018 14.5 0.0 0.035 13.5 0.0 1.5 1 0 0 1 1 1 0 Starch synthase catalytic domain TPR_1 PF00515.23 gi|452211617|ref|YP_007491731.1| - 3.3e-40 134.0 9.0 1.3e-07 30.9 0.3 6.9 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211617|ref|YP_007491731.1| - 2.1e-38 129.8 8.1 2.4e-14 52.7 0.0 4.2 3 1 1 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|452211617|ref|YP_007491731.1| - 1.2e-36 121.6 11.8 4.8e-07 29.1 0.0 7.0 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211617|ref|YP_007491731.1| - 1.9e-36 123.9 13.6 4.9e-11 42.9 1.6 4.8 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211617|ref|YP_007491731.1| - 2.3e-28 96.0 4.7 5.9e-05 22.9 0.0 6.8 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211617|ref|YP_007491731.1| - 2.1e-27 92.7 2.3 7.3e-07 28.5 0.0 6.3 6 1 1 7 7 6 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211617|ref|YP_007491731.1| - 1.3e-20 73.0 4.6 2.1e-06 27.5 1.0 4.9 2 2 4 6 6 6 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211617|ref|YP_007491731.1| - 1.3e-20 71.9 8.1 7.7e-06 26.1 0.0 6.2 2 2 4 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211617|ref|YP_007491731.1| - 5.3e-17 61.9 4.8 6.6e-07 29.5 0.5 3.7 3 1 1 4 4 3 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211617|ref|YP_007491731.1| - 2.9e-15 55.8 0.3 2.7e-05 23.9 0.0 3.8 3 1 0 3 3 3 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211617|ref|YP_007491731.1| - 3.2e-14 52.8 0.9 6e-06 26.3 0.1 2.8 3 0 0 3 3 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|452211617|ref|YP_007491731.1| - 1.8e-12 46.8 2.2 0.016 15.5 0.0 5.5 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211617|ref|YP_007491731.1| - 2.1e-12 45.8 2.7 7.7e-05 22.2 0.0 4.9 6 0 0 6 6 4 3 Tetratricopeptide repeat TPR_15 PF13429.1 gi|452211617|ref|YP_007491731.1| - 5.6e-07 28.8 1.9 0.15 11.0 0.0 3.9 2 2 2 4 4 4 3 Tetratricopeptide repeat NARP1 PF12569.3 gi|452211617|ref|YP_007491731.1| - 5.8e-07 28.6 1.1 0.0052 15.6 0.0 2.3 1 1 0 2 2 2 2 NMDA receptor-regulated protein 1 TPR_20 PF14561.1 gi|452211617|ref|YP_007491731.1| - 2.9e-06 27.3 2.6 0.077 13.1 0.0 3.4 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211617|ref|YP_007491731.1| - 8.4e-06 25.5 1.0 0.078 12.9 0.2 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452211617|ref|YP_007491731.1| - 1.4e-05 24.8 0.9 0.3 11.0 0.0 3.7 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat ChAPs PF09295.5 gi|452211617|ref|YP_007491731.1| - 6.8e-05 21.7 0.1 0.18 10.5 0.0 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) BTAD PF03704.12 gi|452211617|ref|YP_007491731.1| - 0.00033 20.9 4.1 0.014 15.6 0.2 3.2 2 2 0 2 2 2 1 Bacterial transcriptional activator domain TOM20_plant PF06552.7 gi|452211617|ref|YP_007491731.1| - 0.00066 19.3 2.8 0.018 14.6 0.6 2.9 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 Apc5 PF12862.2 gi|452211617|ref|YP_007491731.1| - 0.0011 18.7 0.8 1.6 8.6 0.0 3.3 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 5 DUF3856 PF12968.2 gi|452211617|ref|YP_007491731.1| - 0.0015 18.3 4.4 0.25 11.1 0.0 4.1 2 2 2 4 4 4 1 Domain of Unknown Function (DUF3856) Rapsyn_N PF10579.4 gi|452211617|ref|YP_007491731.1| - 0.01 15.6 0.2 10 6.0 0.0 3.3 2 1 1 3 3 3 0 Rapsyn N-terminal myristoylation and linker region PPR PF01535.15 gi|452211617|ref|YP_007491731.1| - 0.028 14.3 1.6 1.5 9.0 0.0 4.0 4 0 0 4 4 4 0 PPR repeat TPR_4 PF07721.9 gi|452211617|ref|YP_007491731.1| - 0.03 14.7 0.2 12 6.6 0.0 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat FliD_C PF07195.7 gi|452211617|ref|YP_007491731.1| - 0.03 13.5 0.0 0.049 12.9 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus TruB_N PF01509.13 gi|452211617|ref|YP_007491731.1| - 0.037 14.1 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 TruB family pseudouridylate synthase (N terminal domain) DUF3808 PF10300.4 gi|452211617|ref|YP_007491731.1| - 0.044 12.3 0.6 1.3 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3808) TPR_21 PF09976.4 gi|452211617|ref|YP_007491731.1| - 0.052 13.4 0.8 2.7 7.9 0.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat I-set PF07679.11 gi|452211619|ref|YP_007491733.1| - 0.0054 16.5 1.9 5 7.0 0.0 4.4 4 2 0 4 4 4 2 Immunoglobulin I-set domain DUF11 PF01345.13 gi|452211619|ref|YP_007491733.1| - 0.031 14.3 8.0 2.1 8.4 0.1 4.0 2 1 2 4 4 4 0 Domain of unknown function DUF11 Lantibiotic_a PF14867.1 gi|452211619|ref|YP_007491733.1| - 4.3 6.6 7.1 14 5.0 0.4 2.8 2 0 0 2 2 2 0 Lantibiotic alpha MatE PF01554.13 gi|452211620|ref|YP_007491734.1| - 0.014 15.0 2.2 0.017 14.7 1.5 1.1 1 0 0 1 1 1 0 MatE DUF2167 PF09935.4 gi|452211620|ref|YP_007491734.1| - 0.41 9.4 2.2 0.48 9.2 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2167) Myc_target_1 PF15179.1 gi|452211620|ref|YP_007491734.1| - 0.59 9.6 1.9 0.69 9.4 1.3 1.1 1 0 0 1 1 1 0 Myc target protein 1 TM2 PF05154.11 gi|452211620|ref|YP_007491734.1| - 0.76 10.0 7.7 1.5 9.0 5.3 1.6 1 1 0 1 1 1 0 TM2 domain Peptidase_M3 PF01432.15 gi|452211621|ref|YP_007491735.1| - 1.8e-29 103.1 6.2 2.7e-29 102.5 4.3 1.3 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.5 gi|452211621|ref|YP_007491735.1| - 2e-05 24.5 0.6 0.00012 22.0 0.1 2.7 2 0 0 2 2 2 1 Oligopeptidase F SCAN PF02023.12 gi|452211621|ref|YP_007491735.1| - 0.099 12.1 0.7 0.36 10.3 0.1 2.2 2 0 0 2 2 2 0 SCAN domain Peptidase_M50B PF13398.1 gi|452211621|ref|YP_007491735.1| - 0.26 10.6 0.0 0.43 9.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase M50B-like TM2 PF05154.11 gi|452211622|ref|YP_007491736.1| - 1.8 8.8 11.8 12 6.1 8.2 1.9 1 1 0 1 1 1 0 TM2 domain Fic PF02661.13 gi|452211623|ref|YP_007491737.1| - 5.6e-21 75.0 0.0 4.2e-20 72.2 0.0 2.3 2 0 0 2 2 2 1 Fic/DOC family HTH_DeoR PF08220.7 gi|452211623|ref|YP_007491737.1| - 4.8e-05 22.8 0.1 0.00013 21.4 0.0 1.8 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain DUF4172 PF13776.1 gi|452211623|ref|YP_007491737.1| - 0.00048 20.1 0.1 0.0014 18.7 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) Fic_N PF13784.1 gi|452211623|ref|YP_007491737.1| - 0.0015 18.3 0.3 0.0046 16.7 0.2 1.8 1 0 0 1 1 1 1 Fic/DOC family N-terminal HTH_11 PF08279.7 gi|452211623|ref|YP_007491737.1| - 0.0019 17.7 0.0 0.0068 16.0 0.0 2.0 1 0 0 1 1 1 1 HTH domain TrmB PF01978.14 gi|452211623|ref|YP_007491737.1| - 0.0021 17.7 0.8 0.0092 15.6 0.1 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|452211623|ref|YP_007491737.1| - 0.0033 16.9 0.0 0.038 13.5 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|452211623|ref|YP_007491737.1| - 0.016 14.7 0.3 0.065 12.7 0.0 2.1 2 0 0 2 2 2 0 LexA DNA binding domain MarR_2 PF12802.2 gi|452211623|ref|YP_007491737.1| - 0.024 14.3 0.2 0.094 12.3 0.0 2.1 3 0 0 3 3 3 0 MarR family Peptidase_U35_2 PF14550.1 gi|452211623|ref|YP_007491737.1| - 0.039 13.5 0.1 0.1 12.2 0.0 1.7 1 0 0 1 1 1 0 Putative phage protease XkdF HTH_27 PF13463.1 gi|452211623|ref|YP_007491737.1| - 0.039 14.2 0.0 0.2 12.0 0.0 2.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|452211623|ref|YP_007491737.1| - 0.043 13.6 0.0 0.62 9.9 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|452211623|ref|YP_007491737.1| - 0.056 13.5 0.8 0.21 11.6 0.0 2.4 2 1 0 2 2 2 0 Penicillinase repressor FaeA PF04703.7 gi|452211623|ref|YP_007491737.1| - 0.058 13.5 0.3 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 FaeA-like protein DSPc PF00782.15 gi|452211624|ref|YP_007491738.1| - 1.2e-06 28.0 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.22 gi|452211624|ref|YP_007491738.1| - 0.00032 20.1 0.0 0.00042 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.1 gi|452211624|ref|YP_007491738.1| - 0.00049 20.3 0.0 0.00068 19.9 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family PTPlike_phytase PF14566.1 gi|452211624|ref|YP_007491738.1| - 0.07 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate MarR PF01047.17 gi|452211625|ref|YP_007491739.1| - 1.3e-10 40.8 0.0 2.8e-10 39.7 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.2 gi|452211625|ref|YP_007491739.1| - 3.8e-10 39.2 0.0 7.1e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|452211625|ref|YP_007491739.1| - 5.3e-08 33.0 0.0 1.9e-07 31.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|452211625|ref|YP_007491739.1| - 0.00016 21.5 0.0 0.00037 20.3 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|452211625|ref|YP_007491739.1| - 0.002 17.7 0.0 0.0045 16.6 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|452211625|ref|YP_007491739.1| - 0.0052 16.1 0.0 0.017 14.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding KIP1 PF07765.7 gi|452211625|ref|YP_007491739.1| - 0.012 15.4 0.1 0.1 12.4 0.0 2.1 2 0 0 2 2 2 0 KIP1-like protein HTH_5 PF01022.15 gi|452211625|ref|YP_007491739.1| - 0.028 14.0 0.2 3.8 7.2 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family RAG1 PF12940.2 gi|452211625|ref|YP_007491739.1| - 0.04 12.2 0.1 0.047 12.0 0.1 1.2 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1) FeoC PF09012.5 gi|452211625|ref|YP_007491739.1| - 0.053 13.2 0.2 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 FeoC like transcriptional regulator Penicillinase_R PF03965.11 gi|452211625|ref|YP_007491739.1| - 0.065 13.3 0.3 0.3 11.1 0.2 1.9 1 1 0 1 1 1 0 Penicillinase repressor Lon_C PF05362.8 gi|452211626|ref|YP_007491740.1| - 7.1e-90 299.8 1.7 1.6e-89 298.6 1.1 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.24 gi|452211626|ref|YP_007491740.1| - 2.6e-21 76.1 0.0 1.5e-20 73.7 0.0 2.4 3 0 0 3 3 1 1 ATPase family associated with various cellular activities (AAA) LON PF02190.11 gi|452211626|ref|YP_007491740.1| - 7.1e-16 58.5 0.4 1.6e-15 57.3 0.2 1.6 1 0 0 1 1 1 1 ATP-dependent protease La (LON) domain ChlI PF13541.1 gi|452211626|ref|YP_007491740.1| - 6.7e-11 41.7 0.2 2.7e-10 39.8 0.0 2.1 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|452211626|ref|YP_007491740.1| - 4.7e-09 36.1 0.0 1.1e-07 31.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|452211626|ref|YP_007491740.1| - 7.7e-06 26.0 0.1 4.4e-05 23.5 0.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|452211626|ref|YP_007491740.1| - 7.9e-06 26.6 1.4 0.0006 20.6 0.5 3.6 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452211626|ref|YP_007491740.1| - 1.4e-05 25.2 0.0 0.00052 20.1 0.0 2.7 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|452211626|ref|YP_007491740.1| - 0.0001 21.8 0.2 0.00078 18.8 0.0 2.4 2 1 0 2 2 2 1 IstB-like ATP binding protein RuvB_N PF05496.7 gi|452211626|ref|YP_007491740.1| - 0.00013 21.0 0.1 0.00045 19.3 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_19 PF13245.1 gi|452211626|ref|YP_007491740.1| - 0.00016 21.3 1.7 0.00032 20.3 0.1 2.2 2 0 0 2 2 2 1 Part of AAA domain AAA_PrkA PF08298.6 gi|452211626|ref|YP_007491740.1| - 0.00027 19.7 0.0 0.00055 18.7 0.0 1.4 1 0 0 1 1 1 1 PrkA AAA domain Birna_VP4 PF01768.11 gi|452211626|ref|YP_007491740.1| - 0.00038 19.6 0.2 0.00083 18.4 0.2 1.5 1 0 0 1 1 1 1 Birnavirus VP4 protein UPF0079 PF02367.12 gi|452211626|ref|YP_007491740.1| - 0.00066 19.3 1.0 0.0028 17.2 0.1 2.2 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Rad17 PF03215.10 gi|452211626|ref|YP_007491740.1| - 0.0014 17.4 0.1 0.0026 16.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|452211626|ref|YP_007491740.1| - 0.002 18.4 6.6 0.016 15.4 0.1 3.9 3 1 0 3 3 3 1 AAA domain AAA_3 PF07726.6 gi|452211626|ref|YP_007491740.1| - 0.0026 17.3 0.0 0.017 14.6 0.0 2.4 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|452211626|ref|YP_007491740.1| - 0.005 16.7 0.0 0.015 15.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.8 gi|452211626|ref|YP_007491740.1| - 0.007 15.3 0.0 0.024 13.5 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.1 gi|452211626|ref|YP_007491740.1| - 0.0082 16.0 0.0 0.025 14.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.13 gi|452211626|ref|YP_007491740.1| - 0.0085 15.6 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase TIP49 PF06068.8 gi|452211626|ref|YP_007491740.1| - 0.012 14.4 0.1 0.012 14.4 0.1 2.8 3 0 0 3 3 3 0 TIP49 C-terminus AAA_30 PF13604.1 gi|452211626|ref|YP_007491740.1| - 0.017 14.7 0.1 0.048 13.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|452211626|ref|YP_007491740.1| - 0.019 14.6 0.0 0.16 11.6 0.0 2.2 2 0 0 2 2 2 0 NACHT domain Zeta_toxin PF06414.7 gi|452211626|ref|YP_007491740.1| - 0.019 14.0 0.2 0.046 12.8 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.10 gi|452211626|ref|YP_007491740.1| - 0.024 14.3 4.3 0.079 12.6 0.0 3.6 3 1 1 4 4 4 0 NTPase AAA_28 PF13521.1 gi|452211626|ref|YP_007491740.1| - 0.033 14.1 0.6 0.081 12.8 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.1 gi|452211626|ref|YP_007491740.1| - 0.037 13.4 0.1 0.082 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|452211626|ref|YP_007491740.1| - 0.041 14.0 0.0 0.15 12.2 0.0 2.0 2 0 0 2 2 1 0 RNA helicase AAA_24 PF13479.1 gi|452211626|ref|YP_007491740.1| - 0.053 13.0 0.5 0.13 11.8 0.4 1.7 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|452211626|ref|YP_007491740.1| - 0.1 11.7 0.3 0.34 10.0 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.22 gi|452211626|ref|YP_007491740.1| - 0.15 12.3 1.2 0.66 10.2 0.1 2.4 2 0 0 2 2 2 0 ABC transporter AAA_11 PF13086.1 gi|452211626|ref|YP_007491740.1| - 2.6 7.5 5.7 0.48 9.9 0.1 2.3 1 1 1 2 2 2 0 AAA domain FMN_red PF03358.10 gi|452211627|ref|YP_007491741.1| - 1.8e-21 76.2 0.0 2.5e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|452211627|ref|YP_007491741.1| - 5e-13 49.0 0.0 6.1e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|452211627|ref|YP_007491741.1| - 0.003 17.5 0.0 0.0053 16.7 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|452211627|ref|YP_007491741.1| - 0.073 12.4 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin PIN PF01850.16 gi|452211628|ref|YP_007491742.1| - 1.6e-14 54.2 0.2 1.9e-14 54.0 0.1 1.0 1 0 0 1 1 1 1 PIN domain EF-hand_like PF09279.6 gi|452211628|ref|YP_007491742.1| - 0.083 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide-specific phospholipase C, efhand-like PH_8 PF15409.1 gi|452211628|ref|YP_007491742.1| - 0.13 12.3 0.3 0.88 9.6 0.0 2.0 1 1 1 2 2 2 0 Pleckstrin homology domain MFS_1 PF07690.11 gi|452211629|ref|YP_007491743.1| - 2.3e-46 158.1 44.4 2.3e-46 158.1 30.7 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|452211629|ref|YP_007491743.1| - 3.5e-08 32.4 13.3 3.5e-08 32.4 9.3 3.0 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|452211629|ref|YP_007491743.1| - 6.2e-08 31.2 15.4 8.4e-08 30.7 10.7 1.3 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.1 gi|452211629|ref|YP_007491743.1| - 1.5e-06 26.8 24.8 1.5e-06 26.8 17.2 2.8 1 1 1 2 2 2 1 MFS/sugar transport protein Abhydrolase_6 PF12697.2 gi|452211631|ref|YP_007491745.1| - 7.8e-16 58.6 0.0 1.1e-15 58.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|452211631|ref|YP_007491745.1| - 3.6e-13 49.5 0.0 5.4e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|452211631|ref|YP_007491745.1| - 6.7e-05 22.6 0.0 0.00014 21.6 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.15 gi|452211631|ref|YP_007491745.1| - 0.0055 16.9 0.0 0.0073 16.5 0.0 1.4 1 1 0 1 1 1 1 Thioesterase domain DLH PF01738.13 gi|452211631|ref|YP_007491745.1| - 0.0069 15.6 0.0 0.21 10.8 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family FSH1 PF03959.8 gi|452211631|ref|YP_007491745.1| - 0.015 14.7 0.0 0.029 13.8 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Sugar-bind PF04198.8 gi|452211631|ref|YP_007491745.1| - 0.044 12.6 0.0 0.058 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative sugar-binding domain Lipase_3 PF01764.20 gi|452211631|ref|YP_007491745.1| - 0.076 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) DUF4316 PF14195.1 gi|452211631|ref|YP_007491745.1| - 0.13 12.3 0.1 2.5 8.2 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4316) DUF2920 PF11144.3 gi|452211631|ref|YP_007491745.1| - 0.15 11.0 0.0 0.43 9.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2920) LysE PF01810.13 gi|452211632|ref|YP_007491746.1| - 1.8e-32 112.1 13.7 2.2e-32 111.9 9.5 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.11 gi|452211632|ref|YP_007491746.1| - 0.011 15.1 9.3 0.1 12.0 6.4 2.2 1 1 0 1 1 1 0 Integral membrane protein TerC family Sulfate_tra_GLY PF13792.1 gi|452211632|ref|YP_007491746.1| - 0.019 14.6 1.3 0.057 13.0 0.9 1.8 1 0 0 1 1 1 0 Sulfate transporter N-terminal domain with GLY motif DUF1418 PF07214.7 gi|452211632|ref|YP_007491746.1| - 0.059 12.9 0.4 0.13 11.9 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) 2TM PF13239.1 gi|452211632|ref|YP_007491746.1| - 0.31 11.1 3.3 1.1 9.4 0.5 2.4 2 0 0 2 2 2 0 2TM domain Cas_Cas1 PF01867.11 gi|452211633|ref|YP_007491747.1| - 0.05 12.6 0.0 0.055 12.5 0.0 1.0 1 0 0 1 1 1 0 CRISPR associated protein Cas1 PAP2 PF01569.16 gi|452211634|ref|YP_007491748.1| - 4.9e-19 68.2 8.6 4.9e-19 68.2 6.0 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.1 gi|452211634|ref|YP_007491748.1| - 0.088 12.3 5.7 0.22 11.0 3.9 1.7 1 1 0 1 1 1 0 PAP2 superfamily PsaX PF08078.7 gi|452211634|ref|YP_007491748.1| - 0.25 11.3 5.0 0.94 9.4 0.8 3.2 3 0 0 3 3 3 0 PsaX family DUF3488 PF11992.3 gi|452211634|ref|YP_007491748.1| - 1.8 7.1 5.6 1.8 7.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) PAP2_C PF14360.1 gi|452211634|ref|YP_007491748.1| - 4.1 7.7 5.9 0.95 9.7 0.7 2.2 2 1 0 2 2 2 0 PAP2 superfamily C-terminal DUF2795 PF11387.3 gi|452211635|ref|YP_007491749.1| - 9.5e-16 57.3 0.0 1.3e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) MatE PF01554.13 gi|452211636|ref|YP_007491750.1| - 1e-56 191.0 33.1 2.4e-29 102.0 9.4 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|452211636|ref|YP_007491750.1| - 1.1e-10 41.5 14.3 1.4e-07 31.4 6.2 4.3 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain PfkB PF00294.19 gi|452211637|ref|YP_007491751.1| - 6.6e-48 163.3 0.0 8.6e-48 162.9 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|452211637|ref|YP_007491751.1| - 0.013 14.7 0.0 0.025 13.7 0.0 1.4 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase DUF457 PF04307.9 gi|452211638|ref|YP_007491752.1| - 2.4e-15 56.1 9.3 3e-15 55.8 6.4 1.1 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF347 PF03988.7 gi|452211638|ref|YP_007491752.1| - 0.0051 16.6 0.5 1.8 8.5 0.0 2.7 2 0 0 2 2 2 2 Repeat of Unknown Function (DUF347) Zn_dep_PLPC PF00882.13 gi|452211638|ref|YP_007491752.1| - 0.041 13.5 0.0 0.072 12.7 0.0 1.4 1 1 0 1 1 1 0 Zinc dependent phospholipase C MFS_Mycoplasma PF07672.8 gi|452211638|ref|YP_007491752.1| - 0.69 9.0 3.7 4 6.5 0.4 2.2 2 0 0 2 2 2 0 Mycoplasma MFS transporter FixQ PF05545.6 gi|452211638|ref|YP_007491752.1| - 0.79 9.4 0.1 0.79 9.4 0.1 2.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ BatA PF07584.6 gi|452211638|ref|YP_007491752.1| - 0.8 9.9 0.1 0.8 9.9 0.1 2.7 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal DUF2085 PF09858.4 gi|452211638|ref|YP_007491752.1| - 0.83 9.7 3.6 2.5 8.2 0.3 2.6 1 1 0 2 2 2 0 Predicted membrane protein (DUF2085) Peptidase_M48 PF01435.13 gi|452211642|ref|YP_007491756.1| - 3.3e-34 118.4 0.0 4.9e-34 117.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|452211642|ref|YP_007491756.1| - 1.3e-07 30.9 0.4 2.5e-06 26.7 0.0 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 MerC PF03203.9 gi|452211642|ref|YP_007491756.1| - 1.6 9.1 7.9 21 5.5 5.5 2.6 1 1 1 2 2 2 0 MerC mercury resistance protein DUF1129 PF06570.6 gi|452211642|ref|YP_007491756.1| - 3.8 6.7 10.3 0.037 13.3 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF3989 PF13150.1 gi|452211642|ref|YP_007491756.1| - 4.5 6.8 6.2 3.5 7.1 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) ABC_tran PF00005.22 gi|452211644|ref|YP_007491758.1| - 2.6e-35 121.7 0.0 6.5e-35 120.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452211644|ref|YP_007491758.1| - 2.7e-15 57.1 0.2 1.8e-13 51.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|452211644|ref|YP_007491758.1| - 2.1e-07 30.3 4.1 8.3e-05 21.7 0.0 2.6 3 0 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.1 gi|452211644|ref|YP_007491758.1| - 2.8e-06 27.7 1.4 5.2e-06 26.9 1.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452211644|ref|YP_007491758.1| - 8.2e-06 25.2 0.2 1.5e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.10 gi|452211644|ref|YP_007491758.1| - 0.00011 21.0 0.0 0.00015 20.6 0.0 1.1 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein SMC_N PF02463.14 gi|452211644|ref|YP_007491758.1| - 0.0032 16.7 0.1 0.019 14.1 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.1 gi|452211644|ref|YP_007491758.1| - 0.0046 16.5 0.1 0.28 10.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|452211644|ref|YP_007491758.1| - 0.0048 16.1 0.5 0.013 14.6 0.0 1.9 3 0 0 3 3 3 1 Protein of unknown function, DUF258 AAA PF00004.24 gi|452211644|ref|YP_007491758.1| - 0.034 14.3 0.4 0.29 11.3 0.3 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|452211644|ref|YP_007491758.1| - 0.047 13.8 0.3 0.14 12.2 0.2 2.0 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.15 gi|452211644|ref|YP_007491758.1| - 0.069 11.8 0.0 0.11 11.1 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_14 PF13173.1 gi|452211644|ref|YP_007491758.1| - 0.078 12.8 0.1 7.4 6.4 0.0 2.6 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|452211644|ref|YP_007491758.1| - 0.086 12.5 0.1 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|452211644|ref|YP_007491758.1| - 0.11 11.8 0.1 0.23 10.8 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain SbcCD_C PF13558.1 gi|452211644|ref|YP_007491758.1| - 0.12 12.2 0.0 0.5 10.3 0.0 2.2 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|452211644|ref|YP_007491758.1| - 0.12 11.9 0.6 1.3 8.6 0.4 2.3 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_33 PF13671.1 gi|452211644|ref|YP_007491758.1| - 0.13 12.0 0.1 0.29 11.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|452211644|ref|YP_007491758.1| - 0.14 12.1 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_10 PF12846.2 gi|452211644|ref|YP_007491758.1| - 0.17 11.2 1.1 0.21 10.9 0.1 1.6 2 1 0 2 2 2 0 AAA-like domain ABC2_membrane PF01061.19 gi|452211645|ref|YP_007491759.1| - 1.2e-46 158.4 22.0 1.2e-46 158.4 15.2 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|452211645|ref|YP_007491759.1| - 1.1e-20 73.9 32.0 1.1e-20 73.9 22.1 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|452211645|ref|YP_007491759.1| - 2.7e-09 36.3 22.2 4.6e-09 35.5 15.4 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452211645|ref|YP_007491759.1| - 1.6e-08 33.9 31.8 5e-08 32.3 22.2 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein CcmB PF03379.8 gi|452211645|ref|YP_007491759.1| - 7.1e-07 28.6 11.3 7.1e-07 28.6 7.9 1.6 2 0 0 2 2 2 1 CcmB protein LysE PF01810.13 gi|452211646|ref|YP_007491760.1| - 2.6e-20 72.4 9.2 3.3e-20 72.1 6.4 1.1 1 0 0 1 1 1 1 LysE type translocator DUF423 PF04241.10 gi|452211646|ref|YP_007491760.1| - 1.3 8.9 6.1 0.58 10.1 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF423) CobA_CobO_BtuR PF02572.10 gi|452211648|ref|YP_007491762.1| - 7.6e-54 181.9 0.0 8.4e-54 181.7 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IstB_IS21 PF01695.12 gi|452211648|ref|YP_007491762.1| - 0.00019 20.9 0.1 0.17 11.2 0.0 2.1 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.1 gi|452211648|ref|YP_007491762.1| - 0.053 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain MscL PF01741.13 gi|452211650|ref|YP_007491764.1| - 8.1e-06 26.0 1.5 8.1e-06 26.0 1.0 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Flavodoxin_5 PF12724.2 gi|452211651|ref|YP_007491765.1| - 4.1e-21 75.4 0.1 4.8e-21 75.2 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|452211651|ref|YP_007491765.1| - 5.6e-07 29.6 0.0 5.6e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|452211651|ref|YP_007491765.1| - 4.1e-06 26.3 0.0 5.4e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|452211651|ref|YP_007491765.1| - 9.5e-06 25.0 0.0 0.039 13.3 0.0 2.0 1 1 1 2 2 2 2 Flavodoxin ERF PF04404.7 gi|452211651|ref|YP_007491765.1| - 0.05 13.1 0.0 0.055 13.0 0.0 1.2 1 0 0 1 1 1 0 ERF superfamily UPF0081 PF03652.10 gi|452211651|ref|YP_007491765.1| - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0081) ResIII PF04851.10 gi|452211652|ref|YP_007491766.1| - 4.2e-32 111.4 1.4 1.8e-31 109.4 0.1 2.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|452211652|ref|YP_007491766.1| - 3.2e-11 43.3 0.5 2.3e-09 37.3 0.0 3.0 3 0 0 3 3 3 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|452211652|ref|YP_007491766.1| - 5.5e-10 39.3 2.2 2.5e-08 33.9 0.0 3.6 4 1 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|452211652|ref|YP_007491766.1| - 4.8e-07 29.4 0.0 9.5e-07 28.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|452211652|ref|YP_007491766.1| - 3.9e-05 23.4 0.0 0.00011 22.0 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF2075 PF09848.4 gi|452211652|ref|YP_007491766.1| - 0.00079 18.4 0.0 0.0017 17.3 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|452211652|ref|YP_007491766.1| - 0.0026 17.4 0.2 0.014 15.1 0.0 2.2 2 0 0 2 2 2 1 Part of AAA domain FtsK_SpoIIIE PF01580.13 gi|452211652|ref|YP_007491766.1| - 0.012 15.1 0.0 0.031 13.7 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_30 PF13604.1 gi|452211652|ref|YP_007491766.1| - 0.016 14.8 0.0 0.096 12.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Ribosomal_L38e PF01781.13 gi|452211652|ref|YP_007491766.1| - 0.016 14.9 0.1 0.064 13.0 0.1 2.0 1 0 0 1 1 1 0 Ribosomal L38e protein family PhoH PF02562.11 gi|452211652|ref|YP_007491766.1| - 0.023 13.9 0.2 0.24 10.6 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein TrwB_AAD_bind PF10412.4 gi|452211652|ref|YP_007491766.1| - 0.092 11.3 1.3 1.7 7.1 0.1 2.4 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain TPR_12 PF13424.1 gi|452211654|ref|YP_007491768.1| - 7.4e-21 73.8 17.4 8e-09 35.3 0.1 5.6 5 2 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211654|ref|YP_007491768.1| - 2.3e-08 33.5 18.9 0.0054 16.3 0.2 6.4 3 1 4 7 7 7 4 TPR repeat TPR_14 PF13428.1 gi|452211654|ref|YP_007491768.1| - 2.8e-07 30.5 2.7 4.7 8.1 0.0 6.7 6 2 1 7 7 7 1 Tetratricopeptide repeat TPR_2 PF07719.12 gi|452211654|ref|YP_007491768.1| - 3.8e-07 29.5 21.4 0.55 10.2 1.3 7.6 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211654|ref|YP_007491768.1| - 1.2e-06 28.2 5.4 7.4 6.6 0.0 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211654|ref|YP_007491768.1| - 0.00025 20.6 29.4 0.083 12.7 1.7 8.2 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452211654|ref|YP_007491768.1| - 0.00026 20.4 21.3 1.1 8.9 0.0 7.2 8 1 0 8 8 8 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211654|ref|YP_007491768.1| - 0.00098 19.1 8.6 2.4 8.5 0.0 6.2 7 0 0 7 7 7 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211654|ref|YP_007491768.1| - 0.0016 18.5 14.3 0.045 13.8 0.0 5.3 4 1 1 5 5 5 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.1 gi|452211654|ref|YP_007491768.1| - 0.0059 16.9 15.7 4.1 7.7 0.2 6.6 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211654|ref|YP_007491768.1| - 0.042 14.5 6.9 45 4.8 0.1 5.5 4 2 0 5 5 5 0 Tetratricopeptide repeat RPN7 PF10602.4 gi|452211654|ref|YP_007491768.1| - 0.11 11.9 0.2 0.11 11.9 0.2 5.1 4 2 2 6 6 6 0 26S proteasome subunit RPN7 DUF4398 PF14346.1 gi|452211654|ref|YP_007491768.1| - 0.51 10.4 9.8 0.57 10.2 0.3 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4398) TPR_6 PF13174.1 gi|452211654|ref|YP_007491768.1| - 9.7 6.8 11.5 23 5.7 0.5 5.2 6 0 0 6 6 6 0 Tetratricopeptide repeat Helicase_C_2 PF13307.1 gi|452211655|ref|YP_007491769.1| - 6.1e-08 32.7 0.0 7.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain TPR_12 PF13424.1 gi|452211657|ref|YP_007491771.1| - 7.1e-49 163.6 31.9 2.1e-08 33.9 0.4 10.7 8 4 2 10 10 10 8 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211657|ref|YP_007491771.1| - 1.3e-26 92.0 45.6 1.5e-05 24.5 1.1 11.9 8 5 4 12 12 12 8 TPR repeat TPR_2 PF07719.12 gi|452211657|ref|YP_007491771.1| - 1.6e-26 90.0 55.6 0.00059 19.5 0.2 15.1 16 0 0 16 16 15 8 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452211657|ref|YP_007491771.1| - 1.4e-23 81.4 52.8 4e-05 23.0 0.2 14.7 15 2 2 17 17 17 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211657|ref|YP_007491771.1| - 6.3e-23 78.7 60.7 8.2e-05 22.1 0.1 14.7 15 0 0 15 15 14 8 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211657|ref|YP_007491771.1| - 8.4e-23 78.7 5.3 0.3 11.8 0.0 14.7 12 6 4 16 16 15 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|452211657|ref|YP_007491771.1| - 1.6e-22 77.4 24.0 0.0013 18.3 0.0 13.1 14 0 0 14 14 13 4 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211657|ref|YP_007491771.1| - 5.4e-22 77.0 10.1 0.0012 18.6 0.0 12.2 13 0 0 13 13 12 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211657|ref|YP_007491771.1| - 1.4e-17 63.7 19.7 0.28 11.5 0.0 13.1 9 4 4 13 13 13 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211657|ref|YP_007491771.1| - 4.2e-13 49.5 22.0 0.74 10.5 0.0 12.2 9 4 4 13 13 12 4 Tetratricopeptide repeat TPR_6 PF13174.1 gi|452211657|ref|YP_007491771.1| - 1.2e-11 44.2 34.5 0.021 15.2 0.3 13.2 13 3 1 14 14 14 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211657|ref|YP_007491771.1| - 1.1e-07 31.5 28.5 0.95 9.8 0.0 13.9 13 3 2 15 15 15 2 Tetratricopeptide repeat TOM20_plant PF06552.7 gi|452211657|ref|YP_007491771.1| - 4.6e-05 23.0 11.8 0.76 9.3 0.3 6.1 5 1 2 7 7 7 2 Plant specific mitochondrial import receptor subunit TOM20 Sel1 PF08238.7 gi|452211657|ref|YP_007491771.1| - 0.00026 21.5 13.5 7.3 7.3 0.1 6.4 6 0 0 6 6 5 0 Sel1 repeat DUF4473 PF14747.1 gi|452211657|ref|YP_007491771.1| - 0.0032 17.6 0.4 3.4 7.9 0.0 4.8 4 0 0 4 4 4 1 Domain of unknown function (DUF4473) TPR_5 PF12688.2 gi|452211657|ref|YP_007491771.1| - 0.0046 16.9 0.1 11 6.0 0.0 3.9 3 0 0 3 3 3 0 Tetratrico peptide repeat TPR_21 PF09976.4 gi|452211657|ref|YP_007491771.1| - 0.019 14.8 7.0 0.95 9.3 0.1 4.1 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211657|ref|YP_007491771.1| - 0.031 14.1 2.9 38 4.2 0.0 6.0 6 1 1 7 7 7 0 Tetratricopeptide repeat DUF2225 PF09986.4 gi|452211657|ref|YP_007491771.1| - 0.057 12.8 28.2 1.2 8.5 0.2 6.5 4 2 3 7 7 7 0 Uncharacterized protein conserved in bacteria (DUF2225) DUF3366 PF11846.3 gi|452211657|ref|YP_007491771.1| - 0.12 12.2 0.0 9.9 5.9 0.0 3.3 3 1 1 4 4 4 0 Domain of unknown function (DUF3366) Apc3 PF12895.2 gi|452211657|ref|YP_007491771.1| - 0.13 12.4 28.4 0.81 9.8 1.2 8.9 6 5 3 10 10 9 0 Anaphase-promoting complex, cyclosome, subunit 3 RPN7 PF10602.4 gi|452211657|ref|YP_007491771.1| - 0.14 11.5 0.1 0.14 11.5 0.1 4.9 4 1 1 5 5 5 0 26S proteasome subunit RPN7 YfdX PF10938.3 gi|452211657|ref|YP_007491771.1| - 0.2 11.3 1.7 15 5.2 0.2 3.6 4 0 0 4 4 4 0 YfdX protein MIT PF04212.13 gi|452211657|ref|YP_007491771.1| - 0.24 11.2 30.5 0.64 9.9 0.5 8.6 9 2 1 10 10 9 0 MIT (microtubule interacting and transport) domain N6_Mtase PF02384.11 gi|452211658|ref|YP_007491772.1| - 5.2e-65 219.5 0.0 8.8e-65 218.8 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|452211658|ref|YP_007491772.1| - 2.5e-17 63.5 0.6 9.4e-17 61.7 0.0 2.2 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|452211658|ref|YP_007491772.1| - 3.2e-13 49.7 0.0 6e-13 48.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|452211658|ref|YP_007491772.1| - 2.3e-09 37.1 0.0 4.3e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|452211658|ref|YP_007491772.1| - 0.00029 20.4 0.0 0.052 13.1 0.0 2.6 2 0 0 2 2 2 1 Methyltransferase domain Eco57I PF07669.6 gi|452211658|ref|YP_007491772.1| - 0.00053 20.2 0.0 0.0012 19.1 0.0 1.6 1 0 0 1 1 1 1 Eco57I restriction-modification methylase MTS PF05175.9 gi|452211658|ref|YP_007491772.1| - 0.011 15.0 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Exo_endo_phos PF03372.18 gi|452211659|ref|YP_007491773.1| - 2e-26 93.4 0.0 2.4e-26 93.2 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.1 gi|452211659|ref|YP_007491773.1| - 2.8e-12 46.3 0.0 6.4e-12 45.1 0.0 1.6 2 0 0 2 2 2 1 Endonuclease-reverse transcriptase Cupin_2 PF07883.6 gi|452211660|ref|YP_007491774.1| - 1.1e-11 44.0 0.1 5e-11 41.9 0.0 2.1 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.17 gi|452211660|ref|YP_007491774.1| - 4.1e-09 36.0 0.0 1.1e-08 34.5 0.0 1.7 1 1 0 1 1 1 1 Cupin MannoseP_isomer PF01050.13 gi|452211660|ref|YP_007491774.1| - 4.2e-05 23.2 0.0 0.00066 19.3 0.0 2.1 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase AraC_binding PF02311.14 gi|452211660|ref|YP_007491774.1| - 0.0011 18.6 0.0 0.0039 16.8 0.0 1.8 2 0 0 2 2 2 1 AraC-like ligand binding domain EutQ PF06249.7 gi|452211660|ref|YP_007491774.1| - 0.012 15.2 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.7 gi|452211660|ref|YP_007491774.1| - 0.059 12.7 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cache_2 PF08269.6 gi|452211660|ref|YP_007491774.1| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Cache domain Met_10 PF02475.11 gi|452211663|ref|YP_007491777.1| - 5.1e-66 222.0 0.0 9.4e-66 221.2 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|452211663|ref|YP_007491777.1| - 7.4e-09 36.1 0.0 1.4e-08 35.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|452211663|ref|YP_007491777.1| - 2.1e-06 27.2 0.0 4.7e-06 26.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.5 gi|452211663|ref|YP_007491777.1| - 3.3e-06 26.7 0.0 6.6e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_26 PF13659.1 gi|452211663|ref|YP_007491777.1| - 7.7e-06 25.9 0.0 1.3e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|452211663|ref|YP_007491777.1| - 0.00018 21.1 0.0 0.0004 19.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.11 gi|452211663|ref|YP_007491777.1| - 0.0015 17.5 0.0 0.0018 17.2 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase GidB PF02527.10 gi|452211663|ref|YP_007491777.1| - 0.0015 17.6 0.0 0.003 16.7 0.0 1.5 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.8 gi|452211663|ref|YP_007491777.1| - 0.0057 15.8 0.0 0.0093 15.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.10 gi|452211663|ref|YP_007491777.1| - 0.044 13.1 0.0 0.092 12.1 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 tRNA_U5-meth_tr PF05958.6 gi|452211663|ref|YP_007491777.1| - 0.097 11.3 0.0 0.15 10.6 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DUF485 PF04341.7 gi|452211664|ref|YP_007491778.1| - 0.053 13.2 0.7 0.095 12.4 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 CCDC-167 PF15188.1 gi|452211664|ref|YP_007491778.1| - 0.061 13.2 0.4 0.1 12.5 0.3 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 ATP_synth_reg PF14960.1 gi|452211664|ref|YP_007491778.1| - 0.11 11.6 0.0 0.21 10.8 0.0 1.4 1 0 0 1 1 1 0 ATP synthase regulation DUF485 PF04341.7 gi|452211665|ref|YP_007491779.1| - 0.054 13.2 0.8 0.08 12.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF485 CCDC-167 PF15188.1 gi|452211665|ref|YP_007491779.1| - 0.12 12.2 0.2 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 FixP_N PF14715.1 gi|452211667|ref|YP_007491781.1| - 0.12 11.8 0.1 0.21 11.0 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP TrkH PF02386.11 gi|452211667|ref|YP_007491781.1| - 0.12 10.9 0.2 0.15 10.5 0.1 1.1 1 0 0 1 1 1 0 Cation transport protein DUF1434 PF07254.7 gi|452211667|ref|YP_007491781.1| - 0.23 11.2 1.6 0.42 10.4 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1434) TcpE PF12648.2 gi|452211667|ref|YP_007491781.1| - 1.7 8.7 5.2 2.2 8.4 0.0 2.5 1 1 1 2 2 2 0 TcpE family CMD PF02627.15 gi|452211668|ref|YP_007491782.1| - 2.7e-13 49.5 0.0 3.1e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family PPR PF01535.15 gi|452211668|ref|YP_007491782.1| - 0.072 13.0 0.1 3.1 7.9 0.0 2.5 2 0 0 2 2 2 0 PPR repeat MreB_Mbl PF06723.8 gi|452211668|ref|YP_007491782.1| - 0.079 11.5 0.0 0.086 11.4 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein Aldo_ket_red PF00248.16 gi|452211669|ref|YP_007491783.1| - 1.3e-44 152.1 0.0 1.9e-44 151.6 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|452211669|ref|YP_007491783.1| - 1.6e-11 44.3 6.5 4e-11 43.0 4.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452211669|ref|YP_007491783.1| - 9.6e-10 38.3 6.0 2.2e-09 37.2 4.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211669|ref|YP_007491783.1| - 1e-09 38.5 7.9 1e-09 38.5 5.5 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211669|ref|YP_007491783.1| - 3e-07 30.7 7.7 4.4e-06 27.0 0.2 2.8 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211669|ref|YP_007491783.1| - 7e-07 28.9 9.5 2.7e-06 27.0 6.7 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211669|ref|YP_007491783.1| - 7.4e-05 23.0 8.4 0.00026 21.2 5.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452211669|ref|YP_007491783.1| - 0.00035 20.0 12.5 0.00055 19.4 3.3 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211669|ref|YP_007491783.1| - 0.0045 16.7 2.8 0.0045 16.7 2.0 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.1 gi|452211669|ref|YP_007491783.1| - 0.0057 16.2 9.6 0.025 14.1 1.3 2.5 1 1 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.2 gi|452211669|ref|YP_007491783.1| - 0.021 15.0 4.0 0.021 15.0 2.8 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|452211669|ref|YP_007491783.1| - 0.041 14.4 5.3 0.041 14.4 3.7 2.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211669|ref|YP_007491783.1| - 0.056 14.1 8.5 0.2 12.4 1.1 2.7 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|452211669|ref|YP_007491783.1| - 0.13 12.1 8.9 0.21 11.4 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211669|ref|YP_007491783.1| - 0.88 9.6 16.5 0.042 13.7 2.1 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Beta-lactamase PF00144.19 gi|452211670|ref|YP_007491784.1| - 1.4e-33 116.3 0.0 2.1e-33 115.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase 2C_adapt PF08793.5 gi|452211671|ref|YP_007491785.1| - 0.056 13.3 0.2 0.21 11.4 0.0 1.9 1 1 1 2 2 2 0 2-cysteine adaptor domain DUF1638 PF07796.6 gi|452211673|ref|YP_007491787.1| - 1.1e-43 148.7 0.1 1.5e-43 148.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF4548 PF15081.1 gi|452211673|ref|YP_007491787.1| - 0.057 12.9 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) Closter_coat PF01785.12 gi|452211673|ref|YP_007491787.1| - 0.068 12.2 0.0 0.12 11.3 0.0 1.4 1 0 0 1 1 1 0 Closterovirus coat protein zf-CSL PF05207.8 gi|452211673|ref|YP_007491787.1| - 0.45 10.0 2.8 0.49 9.9 0.9 1.8 2 0 0 2 2 2 0 CSL zinc finger Whi5 PF08528.6 gi|452211674|ref|YP_007491788.1| - 0.045 13.3 0.0 0.079 12.6 0.0 1.4 1 0 0 1 1 1 0 Whi5 like DUF643 PF04867.7 gi|452211676|ref|YP_007491790.1| - 0.2 12.0 2.3 0.21 11.9 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF643) PKD PF00801.15 gi|452211677|ref|YP_007491791.1| - 7.6e-43 144.1 17.8 7.3e-17 60.8 0.6 4.1 4 0 0 4 4 4 4 PKD domain ETF_QO PF05187.8 gi|452211677|ref|YP_007491791.1| - 0.00012 22.0 0.4 9 6.3 0.1 3.6 3 1 0 3 3 3 3 Electron transfer flavoprotein-ubiquinone oxidoreductase ANT PF03374.9 gi|452211677|ref|YP_007491791.1| - 0.0017 18.3 4.2 1.4 8.9 0.1 3.3 3 0 0 3 3 3 1 Phage antirepressor protein KilAC domain V-set_CD47 PF08204.6 gi|452211677|ref|YP_007491791.1| - 0.0021 17.8 0.0 8.4 6.1 0.0 3.3 3 0 0 3 3 3 1 CD47 immunoglobulin-like domain ChitinaseA_N PF08329.5 gi|452211677|ref|YP_007491791.1| - 0.071 12.8 0.9 40 3.9 0.1 3.1 3 0 0 3 3 3 0 Chitinase A, N-terminal domain TAT_ubiq PF07706.7 gi|452211677|ref|YP_007491791.1| - 0.074 12.9 0.0 1e+02 2.9 0.0 3.2 3 0 0 3 3 3 0 Aminotransferase ubiquitination site ATP-synt_8 PF00895.15 gi|452211677|ref|YP_007491791.1| - 1.2 9.4 9.2 31 4.8 0.2 3.6 3 0 0 3 3 3 0 ATP synthase protein 8 MIB_HERC2 PF06701.8 gi|452211677|ref|YP_007491791.1| - 3.9 7.5 6.2 11 6.0 0.1 3.0 3 0 0 3 3 3 0 Mib_herc2 GyrI-like PF06445.10 gi|452211678|ref|YP_007491792.1| - 3.8e-23 82.2 0.2 5.1e-23 81.8 0.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MerR_1 PF13411.1 gi|452211678|ref|YP_007491792.1| - 3e-10 39.7 0.0 5.1e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein Cass2 PF14526.1 gi|452211678|ref|YP_007491792.1| - 2e-07 31.1 0.0 4e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Integron-associated effector binding protein MerR PF00376.18 gi|452211678|ref|YP_007491792.1| - 1.1e-06 28.1 0.0 2.1e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.6 gi|452211678|ref|YP_007491792.1| - 0.012 16.0 0.1 0.023 15.1 0.1 1.5 1 0 0 1 1 1 0 MerR, DNA binding PKD PF00801.15 gi|452211680|ref|YP_007491794.1| - 9.2e-15 54.1 3.2 3.1e-14 52.4 0.4 3.2 2 0 0 2 2 2 1 PKD domain Acyl-CoA_dh_M PF02770.14 gi|452211680|ref|YP_007491794.1| - 0.22 11.0 7.8 0.78 9.2 0.3 3.7 3 1 1 4 4 4 0 Acyl-CoA dehydrogenase, middle domain NAS PF03059.11 gi|452211681|ref|YP_007491795.1| - 3.7e-43 147.6 0.0 4.9e-43 147.2 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein Sybindin PF04099.7 gi|452211681|ref|YP_007491795.1| - 0.064 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Sybindin-like family DUF2258 PF10015.4 gi|452211681|ref|YP_007491795.1| - 0.096 12.5 0.1 2.8 7.8 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) HTH_5 PF01022.15 gi|452211683|ref|YP_007491797.1| - 9.2e-14 50.8 0.2 1.6e-13 50.0 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|452211683|ref|YP_007491797.1| - 4.1e-13 48.9 0.4 6.5e-13 48.2 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|452211683|ref|YP_007491797.1| - 1.7e-07 30.7 0.2 2.6e-07 30.2 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|452211683|ref|YP_007491797.1| - 5e-07 29.2 0.2 6.5e-07 28.9 0.2 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452211683|ref|YP_007491797.1| - 4.8e-06 25.8 0.1 2.1e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|452211683|ref|YP_007491797.1| - 5.1e-06 26.1 0.6 3.9e-05 23.3 0.4 2.0 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.17 gi|452211683|ref|YP_007491797.1| - 8.3e-06 25.4 0.0 1.4e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|452211683|ref|YP_007491797.1| - 1.7e-05 24.3 0.2 3.4e-05 23.4 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_26 PF13443.1 gi|452211683|ref|YP_007491797.1| - 0.00079 19.5 0.0 0.28 11.4 0.0 2.2 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_34 PF13601.1 gi|452211683|ref|YP_007491797.1| - 0.00088 19.2 0.2 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|452211683|ref|YP_007491797.1| - 0.0022 18.0 0.1 0.0034 17.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_36 PF13730.1 gi|452211683|ref|YP_007491797.1| - 0.0079 16.3 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|452211683|ref|YP_007491797.1| - 0.0087 16.2 0.0 0.023 14.8 0.0 1.7 1 1 1 2 2 2 1 Winged helix-turn helix DUF2250 PF10007.4 gi|452211683|ref|YP_007491797.1| - 0.021 14.7 0.4 0.031 14.1 0.2 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) LexA_DNA_bind PF01726.11 gi|452211683|ref|YP_007491797.1| - 0.036 13.6 0.0 0.066 12.7 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HxlR PF01638.12 gi|452211683|ref|YP_007491797.1| - 0.036 13.6 0.2 0.048 13.3 0.1 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_41 PF14502.1 gi|452211683|ref|YP_007491797.1| - 0.067 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|452211683|ref|YP_007491797.1| - 0.078 12.9 0.1 0.19 11.7 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.16 gi|452211683|ref|YP_007491797.1| - 0.083 12.3 0.0 0.18 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.1 gi|452211683|ref|YP_007491797.1| - 0.095 12.4 0.0 0.17 11.6 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HN PF00423.14 gi|452211684|ref|YP_007491798.1| - 0.0045 15.3 0.0 0.0046 15.3 0.0 1.0 1 0 0 1 1 1 1 Haemagglutinin-neuraminidase EVC2_like PF12297.3 gi|452211684|ref|YP_007491798.1| - 0.0097 14.5 0.0 0.011 14.4 0.0 1.0 1 0 0 1 1 1 1 Ellis van Creveld protein 2 like protein IncA PF04156.9 gi|452211684|ref|YP_007491798.1| - 0.017 14.7 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 IncA protein DUF4577 PF15145.1 gi|452211684|ref|YP_007491798.1| - 0.024 14.5 0.2 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Syntaxin PF00804.20 gi|452211684|ref|YP_007491798.1| - 0.04 14.0 0.2 0.042 14.0 0.1 1.1 1 0 0 1 1 1 0 Syntaxin DUF948 PF06103.6 gi|452211684|ref|YP_007491798.1| - 0.048 13.5 0.2 0.062 13.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Anoctamin PF04547.7 gi|452211684|ref|YP_007491798.1| - 0.12 11.0 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel FlaC_arch PF05377.6 gi|452211684|ref|YP_007491798.1| - 0.14 12.0 1.1 0.18 11.7 0.7 1.2 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) Cation_ATPase_N PF00690.21 gi|452211684|ref|YP_007491798.1| - 0.19 11.1 0.5 0.34 10.3 0.3 1.4 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus MtrF PF09472.5 gi|452211684|ref|YP_007491798.1| - 9.5 5.5 6.7 3.7 6.8 0.1 2.2 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) PepSY PF03413.14 gi|452211685|ref|YP_007491799.1| - 0.014 16.0 2.3 0.032 14.8 1.6 1.7 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain BatA PF07584.6 gi|452211686|ref|YP_007491800.1| - 0.026 14.6 0.1 0.17 12.0 0.0 2.3 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal Phosphodiest PF01663.17 gi|452211687|ref|YP_007491801.1| - 3.6e-16 59.4 0.0 7.2e-15 55.1 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|452211687|ref|YP_007491801.1| - 4.3e-11 42.5 0.0 2.5e-10 40.0 0.0 2.2 2 1 0 2 2 2 1 Sulfatase Metalloenzyme PF01676.13 gi|452211687|ref|YP_007491801.1| - 3.2e-10 39.8 0.1 2.8e-09 36.7 0.1 2.0 1 1 0 1 1 1 1 Metalloenzyme superfamily PglZ PF08665.7 gi|452211687|ref|YP_007491801.1| - 0.0085 15.7 0.0 0.061 12.9 0.0 2.0 1 1 0 1 1 1 1 PglZ domain DUF1704 PF08014.6 gi|452211687|ref|YP_007491801.1| - 0.045 12.7 0.0 0.059 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1704) DUF4434 PF14488.1 gi|452211687|ref|YP_007491801.1| - 0.1 12.3 0.2 5.6 6.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) NosD PF05048.8 gi|452211688|ref|YP_007491802.1| - 1.3e-37 129.2 23.1 1.3e-37 129.2 16.0 1.8 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|452211688|ref|YP_007491802.1| - 2.7e-20 71.8 0.0 1.1e-09 37.9 0.0 2.5 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|452211688|ref|YP_007491802.1| - 5.1e-08 32.8 19.9 5.1e-08 32.8 13.8 2.0 2 0 0 2 2 2 1 Right handed beta helix region Cupin_2 PF07883.6 gi|452211689|ref|YP_007491803.1| - 4.2e-15 54.9 0.1 1.8e-14 52.9 0.0 2.0 1 1 1 2 2 2 1 Cupin domain HTH_19 PF12844.2 gi|452211689|ref|YP_007491803.1| - 1.1e-09 38.1 0.1 1.8e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|452211689|ref|YP_007491803.1| - 6.8e-08 32.2 0.1 1.2e-07 31.4 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|452211689|ref|YP_007491803.1| - 7.6e-06 26.0 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.13 gi|452211689|ref|YP_007491803.1| - 0.0019 17.8 0.1 0.0036 16.9 0.0 1.5 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|452211689|ref|YP_007491803.1| - 0.0055 16.6 0.0 0.015 15.2 0.0 1.7 1 1 1 2 2 2 1 Mif2/CENP-C like AraC_binding PF02311.14 gi|452211689|ref|YP_007491803.1| - 0.0059 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|452211689|ref|YP_007491803.1| - 0.0083 15.4 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.7 gi|452211689|ref|YP_007491803.1| - 0.041 13.4 0.0 0.081 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ AMP-binding PF00501.23 gi|452211690|ref|YP_007491804.1| - 1.5e-80 270.6 0.0 1.8e-80 270.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|452211690|ref|YP_007491804.1| - 2.1e-19 70.2 0.7 4.9e-19 69.0 0.2 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Fer4_7 PF12838.2 gi|452211691|ref|YP_007491805.1| - 1.5e-10 41.2 7.6 2e-10 40.8 5.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211691|ref|YP_007491805.1| - 1.7e-07 30.9 5.2 2.5e-07 30.4 3.6 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211691|ref|YP_007491805.1| - 1.9e-07 30.7 17.3 1.5e-06 27.9 5.6 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452211691|ref|YP_007491805.1| - 3.4e-06 27.3 6.4 0.011 16.1 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211691|ref|YP_007491805.1| - 3.9e-06 27.0 8.3 8.8e-06 25.8 5.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211691|ref|YP_007491805.1| - 4.1e-06 26.6 7.3 0.017 15.3 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452211691|ref|YP_007491805.1| - 6e-06 25.8 11.5 0.0027 17.5 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|452211691|ref|YP_007491805.1| - 1.2e-05 24.6 13.0 0.00014 21.3 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|452211691|ref|YP_007491805.1| - 2.6e-05 23.8 10.0 0.004 16.9 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211691|ref|YP_007491805.1| - 4.5e-05 23.3 8.4 8.8e-05 22.4 5.9 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211691|ref|YP_007491805.1| - 0.00029 21.2 4.3 0.26 11.7 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452211691|ref|YP_007491805.1| - 0.001 19.3 6.5 0.14 12.5 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|452211691|ref|YP_007491805.1| - 0.0013 19.3 10.3 0.032 14.9 7.4 2.1 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|452211691|ref|YP_007491805.1| - 0.0064 16.9 16.6 0.071 13.6 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211691|ref|YP_007491805.1| - 0.0076 16.8 8.7 0.32 11.6 0.5 2.1 1 1 1 2 2 2 2 4Fe-4S single cluster domain P12 PF12669.2 gi|452211691|ref|YP_007491805.1| - 0.025 14.7 3.9 0.063 13.4 0.2 2.1 2 0 0 2 2 2 0 Virus attachment protein p12 family DUF678 PF05077.7 gi|452211691|ref|YP_007491805.1| - 0.16 11.9 1.6 2.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) POR_N PF01855.14 gi|452211692|ref|YP_007491806.1| - 7.9e-60 202.2 0.0 9.8e-60 201.9 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|452211692|ref|YP_007491806.1| - 1.1e-05 25.0 0.1 1.7e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.15 gi|452211692|ref|YP_007491806.1| - 0.00029 20.7 0.0 0.0005 19.9 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fumerase PF05681.9 gi|452211692|ref|YP_007491806.1| - 0.075 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Fumarate hydratase (Fumerase) POR PF01558.13 gi|452211693|ref|YP_007491807.1| - 7.8e-38 130.0 0.2 1.4e-37 129.2 0.1 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|452211693|ref|YP_007491807.1| - 4.2e-24 84.8 0.1 6.8e-24 84.1 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA_permease_2 PF13520.1 gi|452211694|ref|YP_007491808.1| - 3e-42 144.6 47.3 4.6e-42 144.0 32.8 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|452211694|ref|YP_007491808.1| - 1.5e-31 109.2 48.0 2.5e-31 108.5 33.3 1.3 1 1 0 1 1 1 1 Amino acid permease PsbL PF02419.12 gi|452211694|ref|YP_007491808.1| - 2.4 7.6 5.2 0.54 9.7 0.4 2.4 2 0 0 2 2 2 0 PsbL protein Lactamase_B PF00753.22 gi|452211695|ref|YP_007491809.1| - 1.9e-23 83.1 0.0 3e-23 82.4 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|452211695|ref|YP_007491809.1| - 1e-05 25.5 0.0 2.7e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Flavodoxin Lactamase_B_3 PF13483.1 gi|452211695|ref|YP_007491809.1| - 0.00028 20.6 0.0 0.00064 19.4 0.0 1.5 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Flavodoxin_5 PF12724.2 gi|452211695|ref|YP_007491809.1| - 0.0075 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Hydrolase_4 PF12146.3 gi|452211695|ref|YP_007491809.1| - 0.012 15.3 0.0 0.057 13.2 0.0 2.1 2 0 0 2 2 2 0 Putative lysophospholipase UPF0261 PF06792.6 gi|452211695|ref|YP_007491809.1| - 0.096 11.1 0.0 0.16 10.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Gln-synt_C PF00120.19 gi|452211697|ref|YP_007491811.1| - 2e-43 148.3 0.0 5.7e-43 146.9 0.0 1.7 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|452211697|ref|YP_007491811.1| - 5.8e-12 45.0 0.0 1.2e-11 44.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Glycolipid_bind PF06475.6 gi|452211697|ref|YP_007491811.1| - 6.4e-05 22.1 0.0 0.00012 21.3 0.0 1.4 1 0 0 1 1 1 1 Putative glycolipid-binding Ion_trans PF00520.26 gi|452211698|ref|YP_007491812.1| - 2.4e-20 72.6 8.1 2.4e-20 72.6 5.6 1.6 2 0 0 2 2 2 1 Ion transport protein Ion_trans_2 PF07885.11 gi|452211698|ref|YP_007491812.1| - 1.8e-14 53.1 7.7 1.8e-14 53.1 5.3 2.3 2 0 0 2 2 2 1 Ion channel zf-ribbon_3 PF13248.1 gi|452211698|ref|YP_007491812.1| - 5.1e-06 25.5 2.5 7.5e-06 24.9 1.7 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|452211698|ref|YP_007491812.1| - 0.0029 17.3 1.8 0.0049 16.6 1.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|452211698|ref|YP_007491812.1| - 0.16 11.5 4.5 0.63 9.6 3.2 1.8 1 1 1 2 2 2 0 zinc-ribbon domain DUF2304 PF10066.4 gi|452211698|ref|YP_007491812.1| - 1.1 9.1 6.6 7.3 6.4 0.3 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) zf-CCHC_3 PF13917.1 gi|452211698|ref|YP_007491812.1| - 1.2 8.9 6.9 0.66 9.7 0.4 2.2 1 1 1 2 2 2 0 Zinc knuckle Nudix_N_2 PF14803.1 gi|452211698|ref|YP_007491812.1| - 1.3 8.7 5.5 0.54 9.9 0.1 2.6 3 0 0 3 3 3 0 Nudix N-terminal tRNA_deacylase PF04414.7 gi|452211699|ref|YP_007491813.1| - 5.1e-70 234.9 0.0 6.2e-70 234.6 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DUF3147 PF11345.3 gi|452211700|ref|YP_007491814.1| - 8.2e-36 122.3 6.1 9.2e-36 122.1 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) DUF3147 PF11345.3 gi|452211701|ref|YP_007491815.1| - 9.8e-41 138.1 11.5 1.1e-40 137.9 8.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) Bax1-I PF01027.15 gi|452211701|ref|YP_007491815.1| - 0.44 10.1 8.2 0.66 9.5 5.7 1.2 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF4131 PF13567.1 gi|452211701|ref|YP_007491815.1| - 1.8 7.9 7.6 3 7.2 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) PAP2 PF01569.16 gi|452211701|ref|YP_007491815.1| - 6 6.5 8.3 1.6 8.4 3.3 1.7 1 1 1 2 2 2 0 PAP2 superfamily DUF2389 PF09493.5 gi|452211702|ref|YP_007491816.1| - 0.019 15.2 0.2 0.02 15.1 0.2 1.1 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) Desulfoferrod_N PF06397.7 gi|452211703|ref|YP_007491817.1| - 0.21 10.9 20.4 0.14 11.5 2.8 2.5 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain MatE PF01554.13 gi|452211705|ref|YP_007491819.1| - 6.2e-58 194.9 38.4 9.5e-33 113.1 9.3 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|452211705|ref|YP_007491819.1| - 7.5e-11 42.0 22.0 3.4e-09 36.6 9.5 4.6 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.17 gi|452211706|ref|YP_007491820.1| - 4.8e-16 58.2 0.0 5.4e-15 54.8 0.0 2.1 1 1 1 2 2 2 1 MarR family MarR_2 PF12802.2 gi|452211706|ref|YP_007491820.1| - 1e-13 50.6 0.0 1.6e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|452211706|ref|YP_007491820.1| - 2e-08 33.4 0.0 5.8e-08 32.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|452211706|ref|YP_007491820.1| - 2.2e-08 34.3 0.0 3.8e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|452211706|ref|YP_007491820.1| - 2.7e-06 26.9 0.4 8.3e-06 25.4 0.3 1.8 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|452211706|ref|YP_007491820.1| - 4.1e-06 26.2 0.8 5.5e-06 25.8 0.6 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit Fe_dep_repress PF01325.14 gi|452211706|ref|YP_007491820.1| - 5e-06 26.3 0.1 1.2e-05 25.1 0.0 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.1 gi|452211706|ref|YP_007491820.1| - 1.1e-05 25.4 0.2 1.5e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|452211706|ref|YP_007491820.1| - 4.6e-05 22.9 0.0 7.5e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain B-block_TFIIIC PF04182.7 gi|452211706|ref|YP_007491820.1| - 9e-05 22.2 0.1 0.00019 21.2 0.0 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_Crp_2 PF13545.1 gi|452211706|ref|YP_007491820.1| - 0.00019 21.1 0.0 0.00083 19.0 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain RPA_C PF08784.6 gi|452211706|ref|YP_007491820.1| - 0.0003 21.1 0.0 0.00059 20.2 0.0 1.5 1 0 0 1 1 1 1 Replication protein A C terminal HTH_36 PF13730.1 gi|452211706|ref|YP_007491820.1| - 0.0007 19.6 0.4 0.002 18.2 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HxlR PF01638.12 gi|452211706|ref|YP_007491820.1| - 0.00092 18.7 0.0 0.002 17.7 0.0 1.5 2 0 0 2 2 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|452211706|ref|YP_007491820.1| - 0.0016 17.9 0.0 0.0026 17.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain ANT PF03374.9 gi|452211706|ref|YP_007491820.1| - 0.0029 17.6 0.1 0.005 16.8 0.1 1.4 1 0 0 1 1 1 1 Phage antirepressor protein KilAC domain GntR PF00392.16 gi|452211706|ref|YP_007491820.1| - 0.0039 16.6 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_29 PF13551.1 gi|452211706|ref|YP_007491820.1| - 0.0053 16.9 0.0 0.0076 16.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix FUR PF01475.14 gi|452211706|ref|YP_007491820.1| - 0.027 14.4 0.2 0.043 13.7 0.2 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family PadR PF03551.9 gi|452211706|ref|YP_007491820.1| - 0.038 13.7 1.1 0.053 13.2 0.2 1.6 2 0 0 2 2 1 0 Transcriptional regulator PadR-like family DUF4065 PF13274.1 gi|452211706|ref|YP_007491820.1| - 0.04 14.6 0.4 0.068 13.8 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) DUF3116 PF11313.3 gi|452211706|ref|YP_007491820.1| - 0.043 13.4 0.2 0.071 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) HTH_23 PF13384.1 gi|452211706|ref|YP_007491820.1| - 0.043 13.4 0.0 0.096 12.3 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_20 PF12840.2 gi|452211706|ref|YP_007491820.1| - 0.052 13.3 0.0 0.12 12.2 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain Mga PF05043.8 gi|452211706|ref|YP_007491820.1| - 0.06 13.6 0.1 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 Mga helix-turn-helix domain STN1_2 PF09170.5 gi|452211706|ref|YP_007491820.1| - 0.072 12.8 0.2 0.089 12.5 0.1 1.3 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 HTH_DeoR PF08220.7 gi|452211706|ref|YP_007491820.1| - 0.074 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.15 gi|452211706|ref|YP_007491820.1| - 0.092 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_28 PF13518.1 gi|452211706|ref|YP_007491820.1| - 0.12 12.4 0.1 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_4 PF13613.1 gi|452211706|ref|YP_007491820.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease DUF2157 PF09925.4 gi|452211707|ref|YP_007491821.1| - 2.1e-09 37.1 1.1 2.1e-09 37.1 0.8 1.5 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) DUF2881 PF11087.3 gi|452211708|ref|YP_007491822.1| - 0.078 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2881) DUF4401 PF14351.1 gi|452211709|ref|YP_007491823.1| - 0.04 12.9 10.4 0.05 12.5 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) Abhydrolase_6 PF12697.2 gi|452211710|ref|YP_007491824.1| - 1.3e-21 77.4 0.0 1.6e-21 77.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|452211710|ref|YP_007491824.1| - 4.1e-17 62.2 0.0 1.5e-16 60.4 0.0 1.8 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|452211710|ref|YP_007491824.1| - 1.7e-15 56.8 0.0 5e-09 35.6 0.0 2.2 1 1 1 2 2 2 2 Prolyl oligopeptidase family BAAT_C PF08840.6 gi|452211710|ref|YP_007491824.1| - 7e-12 45.5 0.0 8.5e-08 32.1 0.0 2.3 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.13 gi|452211710|ref|YP_007491824.1| - 1.3e-11 44.4 0.0 2.1e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.13 gi|452211710|ref|YP_007491824.1| - 3.1e-08 33.1 0.0 0.0037 16.5 0.0 2.7 3 0 0 3 3 3 2 Dienelactone hydrolase family Abhydrolase_1 PF00561.15 gi|452211710|ref|YP_007491824.1| - 1.7e-06 27.7 0.0 3.3e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.8 gi|452211710|ref|YP_007491824.1| - 2.4e-05 23.9 0.0 0.00028 20.5 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.7 gi|452211710|ref|YP_007491824.1| - 4.7e-05 22.0 0.0 0.034 12.6 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) DUF1100 PF06500.6 gi|452211710|ref|YP_007491824.1| - 0.0016 17.1 0.0 0.0035 15.9 0.0 1.5 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1100) Hydrolase_4 PF12146.3 gi|452211710|ref|YP_007491824.1| - 0.0047 16.7 0.1 0.0094 15.7 0.0 1.4 1 0 0 1 1 1 1 Putative lysophospholipase PGAP1 PF07819.8 gi|452211710|ref|YP_007491824.1| - 0.0075 15.8 0.0 0.018 14.6 0.0 1.6 1 0 0 1 1 1 1 PGAP1-like protein Acyl_transf_2 PF02273.10 gi|452211710|ref|YP_007491824.1| - 0.0098 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Acyl transferase FSH1 PF03959.8 gi|452211710|ref|YP_007491824.1| - 0.013 14.9 0.0 0.15 11.4 0.0 2.2 1 1 0 1 1 1 0 Serine hydrolase (FSH1) DUF2974 PF11187.3 gi|452211710|ref|YP_007491824.1| - 0.043 13.1 0.0 0.066 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Endonuc_Holl PF10107.4 gi|452211710|ref|YP_007491824.1| - 0.097 12.3 0.2 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase EamA PF00892.15 gi|452211711|ref|YP_007491825.1| - 3e-18 66.0 36.1 2.9e-09 37.0 10.5 2.5 2 0 0 2 2 2 2 EamA-like transporter family Trp_oprn_chp PF09534.5 gi|452211711|ref|YP_007491825.1| - 0.35 10.4 2.9 0.43 10.1 0.1 2.3 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) EmrE PF13536.1 gi|452211711|ref|YP_007491825.1| - 5.5 7.2 32.7 0.026 14.7 4.5 3.6 1 1 2 3 3 3 0 Multidrug resistance efflux transporter GATase PF00117.23 gi|452211712|ref|YP_007491826.1| - 3.1e-25 88.7 0.0 6.6e-25 87.6 0.0 1.5 1 1 1 2 2 2 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|452211712|ref|YP_007491826.1| - 3.9e-07 29.7 0.2 1.6e-06 27.7 0.1 1.9 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|452211712|ref|YP_007491826.1| - 2.6e-06 27.1 0.0 3.8e-06 26.5 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain HTS PF04204.11 gi|452211712|ref|YP_007491826.1| - 1.3e-05 24.1 0.0 1.7e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.19 gi|452211712|ref|YP_007491826.1| - 7.7e-05 22.1 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF2156 PF09924.4 gi|452211713|ref|YP_007491827.1| - 1.2e-95 319.8 0.0 1.6e-95 319.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2156) UPF0104 PF03706.8 gi|452211713|ref|YP_007491827.1| - 1.5e-15 57.2 27.7 1.5e-15 57.2 19.2 3.1 2 1 1 3 3 3 1 Uncharacterised protein family (UPF0104) Peptidase_C1 PF00112.18 gi|452211714|ref|YP_007491828.1| - 4.1e-25 88.9 0.1 6.9e-25 88.2 0.1 1.3 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.15 gi|452211714|ref|YP_007491828.1| - 2.7e-21 75.0 5.3 1.3e-12 47.3 0.8 2.8 2 0 0 2 2 2 2 PKD domain Peptidase_C1_2 PF03051.10 gi|452211714|ref|YP_007491828.1| - 0.022 13.2 0.3 0.36 9.2 0.1 2.1 2 0 0 2 2 2 0 Peptidase C1-like family MatE PF01554.13 gi|452211715|ref|YP_007491829.1| - 1.2e-30 106.3 33.8 1.4e-15 57.3 7.9 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|452211715|ref|YP_007491829.1| - 6.2e-10 39.0 24.0 2.3e-08 33.9 11.2 4.8 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Peptidase_M50 PF02163.17 gi|452211715|ref|YP_007491829.1| - 0.11 11.3 1.8 0.32 9.9 1.2 2.1 1 1 0 1 1 1 0 Peptidase family M50 Response_reg PF00072.19 gi|452211717|ref|YP_007491831.1| - 5.8e-40 135.7 1.0 6.2e-19 68.0 0.1 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.21 gi|452211717|ref|YP_007491831.1| - 6.4e-34 116.0 0.0 1.3e-33 114.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|452211717|ref|YP_007491831.1| - 2.9e-19 68.8 0.2 1e-18 67.0 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.1 gi|452211717|ref|YP_007491831.1| - 1.6e-16 60.5 0.0 4.3e-08 33.4 0.0 2.8 3 0 0 3 3 3 2 PAS domain PAS_8 PF13188.1 gi|452211717|ref|YP_007491831.1| - 2.2e-15 55.8 0.0 3.8e-06 26.5 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|452211717|ref|YP_007491831.1| - 3.9e-13 49.1 0.0 7.2e-08 32.2 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|452211717|ref|YP_007491831.1| - 4.6e-08 33.0 0.0 3.1e-05 23.9 0.0 2.6 2 1 0 2 2 2 2 PAS fold PAS_3 PF08447.6 gi|452211717|ref|YP_007491831.1| - 0.00022 21.2 0.0 0.00058 19.9 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.1 gi|452211717|ref|YP_007491831.1| - 0.054 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|452211717|ref|YP_007491831.1| - 0.089 12.5 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.19 gi|452211718|ref|YP_007491832.1| - 8.2e-25 86.9 0.0 9.1e-25 86.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_U32 PF01136.14 gi|452211719|ref|YP_007491833.1| - 3.7e-74 248.5 0.0 4.6e-74 248.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 PEPcase_2 PF14010.1 gi|452211720|ref|YP_007491834.1| - 3.6e-155 517.0 0.0 4.1e-155 516.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Prismane PF03063.15 gi|452211721|ref|YP_007491835.1| - 1.9e-173 577.5 0.0 2.1e-173 577.4 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_7 PF12838.2 gi|452211723|ref|YP_007491837.1| - 5.8e-08 32.9 6.3 0.00014 22.1 0.2 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|452211723|ref|YP_007491837.1| - 5.7e-06 25.7 12.6 0.00067 19.1 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452211723|ref|YP_007491837.1| - 9.6e-06 25.7 20.3 6.2e-05 23.1 7.3 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211723|ref|YP_007491837.1| - 9.7e-06 25.2 11.3 0.0012 18.6 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_3 PF12641.2 gi|452211723|ref|YP_007491837.1| - 1.6e-05 24.3 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Fer4_2 PF12797.2 gi|452211723|ref|YP_007491837.1| - 2.2e-05 24.0 9.6 0.0016 18.2 1.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211723|ref|YP_007491837.1| - 2.2e-05 25.0 6.7 0.016 15.9 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Flavodoxin_5 PF12724.2 gi|452211723|ref|YP_007491837.1| - 2.3e-05 24.4 0.0 3.9e-05 23.6 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin domain Fer4_8 PF13183.1 gi|452211723|ref|YP_007491837.1| - 0.00017 21.5 11.5 0.0048 16.9 8.0 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211723|ref|YP_007491837.1| - 0.00019 21.1 11.5 0.00066 19.4 8.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211723|ref|YP_007491837.1| - 0.0014 18.4 10.6 0.036 13.9 1.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452211723|ref|YP_007491837.1| - 0.011 16.2 14.9 0.22 12.1 2.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452211723|ref|YP_007491837.1| - 0.012 16.0 11.4 0.08 13.3 2.0 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Cbl_N3 PF02762.9 gi|452211723|ref|YP_007491837.1| - 0.097 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain Fer4_17 PF13534.1 gi|452211723|ref|YP_007491837.1| - 0.35 11.2 16.2 20 5.5 8.4 2.7 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211723|ref|YP_007491837.1| - 2.3 8.7 17.0 0.36 11.2 2.6 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211723|ref|YP_007491837.1| - 2.4 8.8 5.5 5 7.7 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452211723|ref|YP_007491837.1| - 7.4 7.0 9.2 27 5.2 1.9 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF2265 PF10023.4 gi|452211725|ref|YP_007491839.1| - 0.2 10.7 9.6 0.22 10.6 6.6 1.0 1 0 0 1 1 1 0 Predicted aminopeptidase (DUF2265) MarR_2 PF12802.2 gi|452211726|ref|YP_007491840.1| - 1.9e-05 24.2 0.0 3.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|452211726|ref|YP_007491840.1| - 4.6e-05 23.6 0.1 0.0001 22.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|452211726|ref|YP_007491840.1| - 0.00021 20.6 1.0 0.00041 19.6 0.7 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding CarboxypepD_reg PF13620.1 gi|452211726|ref|YP_007491840.1| - 0.0032 17.4 0.1 0.0072 16.3 0.0 1.7 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain MarR PF01047.17 gi|452211726|ref|YP_007491840.1| - 0.0047 16.5 0.1 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 MarR family DUF4480 PF13715.1 gi|452211726|ref|YP_007491840.1| - 0.0064 16.5 0.1 0.017 15.1 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4480) FeoC PF09012.5 gi|452211726|ref|YP_007491840.1| - 0.013 15.1 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator Y_Y_Y PF07495.8 gi|452211726|ref|YP_007491840.1| - 0.014 15.0 0.2 0.036 13.8 0.2 1.7 1 0 0 1 1 1 0 Y_Y_Y domain IncA PF04156.9 gi|452211726|ref|YP_007491840.1| - 0.023 14.2 0.0 0.031 13.8 0.0 1.2 1 0 0 1 1 1 0 IncA protein RNA_pol_Rpc34 PF05158.7 gi|452211726|ref|YP_007491840.1| - 0.028 13.5 0.1 0.044 12.9 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_Crp_2 PF13545.1 gi|452211726|ref|YP_007491840.1| - 0.098 12.4 0.1 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Yae1_N PF09811.4 gi|452211727|ref|YP_007491841.1| - 0.00079 18.8 0.6 0.15 11.6 0.1 2.2 2 0 0 2 2 2 2 Essential protein Yae1, N terminal Seadorna_Vp10 PF07322.6 gi|452211727|ref|YP_007491841.1| - 0.0081 15.4 0.6 0.035 13.3 0.1 1.9 1 1 1 2 2 2 1 Seadornavirus Vp10 DUF4179 PF13786.1 gi|452211727|ref|YP_007491841.1| - 0.04 14.1 1.6 0.04 14.1 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4179) HdeA PF06411.6 gi|452211727|ref|YP_007491841.1| - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 HdeA/HdeB family Glyoxalase_2 PF12681.2 gi|452211728|ref|YP_007491842.1| - 1.7e-11 44.6 0.0 2e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|452211728|ref|YP_007491842.1| - 0.0024 17.8 0.0 0.028 14.4 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glycos_transf_2 PF00535.21 gi|452211729|ref|YP_007491843.1| - 0.002 17.8 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.1 gi|452211729|ref|YP_007491843.1| - 0.047 13.3 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Polysacc_synt PF01943.12 gi|452211731|ref|YP_007491845.1| - 2.1e-40 138.6 26.2 2.1e-40 138.6 18.2 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|452211731|ref|YP_007491845.1| - 7.8e-19 68.1 22.9 7.8e-19 68.1 15.9 2.7 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein MatE PF01554.13 gi|452211731|ref|YP_007491845.1| - 2.8e-14 53.0 16.4 2.8e-14 53.0 11.3 4.0 3 1 2 5 5 5 2 MatE Polysacc_synt_C PF14667.1 gi|452211731|ref|YP_007491845.1| - 7.9e-13 48.4 17.9 7.9e-13 48.4 12.4 4.2 3 1 2 5 5 5 1 Polysaccharide biosynthesis C-terminal domain DUF2873 PF11395.3 gi|452211731|ref|YP_007491845.1| - 0.032 13.7 0.2 0.032 13.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) ATP-grasp_4 PF13535.1 gi|452211732|ref|YP_007491846.1| - 3e-37 128.1 0.1 4.6e-37 127.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|452211732|ref|YP_007491846.1| - 2.3e-05 23.3 0.0 3.6e-05 22.6 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|452211732|ref|YP_007491846.1| - 0.00025 20.9 0.0 0.00048 20.0 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain Kinesin PF00225.18 gi|452211732|ref|YP_007491846.1| - 0.043 12.5 0.0 0.062 11.9 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain Phage_FRD3 PF05798.6 gi|452211732|ref|YP_007491846.1| - 0.07 13.4 0.1 7 7.0 0.0 3.3 3 0 0 3 3 3 0 Bacteriophage FRD3 protein THUMP PF02926.12 gi|452211732|ref|YP_007491846.1| - 0.21 11.4 5.8 0.52 10.1 0.5 2.9 2 1 0 3 3 3 0 THUMP domain SpoIIAA-like PF11964.3 gi|452211733|ref|YP_007491847.1| - 4.1e-30 104.2 0.1 4.5e-30 104.1 0.1 1.0 1 0 0 1 1 1 1 SpoIIAA-like ABC_tran PF00005.22 gi|452211735|ref|YP_007491849.1| - 8.3e-18 65.0 0.1 2e-17 63.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452211735|ref|YP_007491849.1| - 1e-11 45.3 0.1 1.6e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|452211735|ref|YP_007491849.1| - 3.8e-08 33.7 0.0 1.2e-07 32.0 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|452211735|ref|YP_007491849.1| - 0.014 14.4 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.1 gi|452211735|ref|YP_007491849.1| - 0.089 12.7 0.0 0.27 11.1 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC2_membrane PF01061.19 gi|452211736|ref|YP_007491850.1| - 5.7e-31 107.3 25.9 5.7e-31 107.3 17.9 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|452211736|ref|YP_007491850.1| - 1.4e-15 57.2 30.3 1.4e-15 57.2 21.0 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|452211736|ref|YP_007491850.1| - 1.5e-08 33.8 21.9 1.7e-08 33.7 15.2 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|452211736|ref|YP_007491850.1| - 0.00026 20.2 29.4 0.00036 19.7 20.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein adh_short PF00106.20 gi|452211738|ref|YP_007491852.1| - 6.2e-35 120.5 0.0 7.3e-35 120.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|452211738|ref|YP_007491852.1| - 9.8e-21 74.6 0.0 1.2e-20 74.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|452211738|ref|YP_007491852.1| - 1.9e-12 47.2 0.0 2.6e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|452211738|ref|YP_007491852.1| - 0.0002 20.8 0.1 0.00031 20.2 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Shikimate_DH PF01488.15 gi|452211738|ref|YP_007491852.1| - 0.0015 18.6 0.4 0.0026 17.8 0.3 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|452211738|ref|YP_007491852.1| - 0.005 17.2 0.3 0.0084 16.5 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.10 gi|452211738|ref|YP_007491852.1| - 0.0088 14.9 0.1 0.01 14.7 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|452211738|ref|YP_007491852.1| - 0.014 15.3 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 NADH(P)-binding 3Beta_HSD PF01073.14 gi|452211738|ref|YP_007491852.1| - 0.027 13.1 0.1 0.038 12.6 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.14 gi|452211738|ref|YP_007491852.1| - 0.057 12.4 0.1 0.11 11.5 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Meth_synt_2 PF01717.13 gi|452211738|ref|YP_007491852.1| - 0.088 11.7 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain NAD_Gly3P_dh_N PF01210.18 gi|452211738|ref|YP_007491852.1| - 0.14 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pribosyltran PF00156.22 gi|452211740|ref|YP_007491854.1| - 7.2e-25 87.1 0.2 1.4e-24 86.1 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|452211740|ref|YP_007491854.1| - 5.1e-05 22.5 0.2 0.0001 21.5 0.1 1.6 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|452211740|ref|YP_007491854.1| - 0.0021 17.4 0.0 0.021 14.1 0.0 2.0 2 0 0 2 2 2 1 Phosphoribosyl transferase Pribosyl_synth PF14572.1 gi|452211740|ref|YP_007491854.1| - 0.029 14.1 0.2 0.041 13.6 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain CbiG_N PF11760.3 gi|452211740|ref|YP_007491854.1| - 0.17 11.6 0.8 0.56 9.9 0.3 2.0 2 1 0 2 2 2 0 Cobalamin synthesis G N-terminal DDE_3 PF13358.1 gi|452211741|ref|YP_007491855.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease HTH_29 PF13551.1 gi|452211742|ref|YP_007491856.1| - 4.9e-25 87.8 0.1 1.9e-24 85.9 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|452211742|ref|YP_007491856.1| - 1.2e-10 42.0 0.1 5.8e-09 36.6 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|452211742|ref|YP_007491856.1| - 9.4e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|452211742|ref|YP_007491856.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|452211742|ref|YP_007491856.1| - 0.041 13.9 0.0 1.8 8.6 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|452211742|ref|YP_007491856.1| - 0.05 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|452211742|ref|YP_007491856.1| - 0.14 11.9 0.8 0.54 9.9 0.2 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB PHO4 PF01384.15 gi|452211744|ref|YP_007491858.1| - 1.6e-101 339.2 41.5 1.8e-101 339.0 28.8 1.0 1 0 0 1 1 1 1 Phosphate transporter family DUF3318 PF11780.3 gi|452211744|ref|YP_007491858.1| - 1.1 8.7 6.3 0.38 10.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3318) PhoU_div PF01865.11 gi|452211745|ref|YP_007491859.1| - 6.3e-51 172.5 0.6 7.1e-51 172.4 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 gi|452211745|ref|YP_007491859.1| - 0.00068 20.0 0.6 1.1 9.7 0.1 2.4 2 0 0 2 2 2 2 PhoU domain DUF2970 PF11174.3 gi|452211746|ref|YP_007491860.1| - 0.013 15.0 1.9 0.013 15.0 1.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) HTH_3 PF01381.17 gi|452211747|ref|YP_007491861.1| - 9.2e-14 51.0 0.1 1.3e-13 50.5 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|452211747|ref|YP_007491861.1| - 1.9e-10 40.6 0.1 3.3e-10 39.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|452211747|ref|YP_007491861.1| - 9.2e-06 25.7 0.0 1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|452211747|ref|YP_007491861.1| - 2.5e-05 24.3 0.0 4e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.7 gi|452211747|ref|YP_007491861.1| - 0.006 16.2 0.1 0.016 14.8 0.0 1.6 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.1 gi|452211747|ref|YP_007491861.1| - 0.0087 15.4 0.1 0.016 14.6 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|452211747|ref|YP_007491861.1| - 0.023 14.3 0.0 0.044 13.4 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Crp_2 PF13545.1 gi|452211747|ref|YP_007491861.1| - 0.028 14.1 0.0 0.05 13.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_10 PF04967.7 gi|452211747|ref|YP_007491861.1| - 0.061 12.9 0.1 0.28 10.7 0.0 1.9 2 0 0 2 2 2 0 HTH DNA binding domain HTH_AsnC-type PF13404.1 gi|452211747|ref|YP_007491861.1| - 0.15 11.6 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.11 gi|452211747|ref|YP_007491861.1| - 0.15 11.3 0.0 0.35 10.2 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.10 gi|452211747|ref|YP_007491861.1| - 0.16 11.8 0.2 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HK PF02110.10 gi|452211748|ref|YP_007491862.1| - 9.3e-74 247.6 4.4 3.9e-46 157.2 0.4 2.0 1 1 1 2 2 2 2 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 gi|452211748|ref|YP_007491862.1| - 3.1e-05 23.2 3.0 0.0019 17.4 2.1 2.1 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase TMP-TENI PF02581.12 gi|452211749|ref|YP_007491863.1| - 2.7e-58 196.0 2.1 3.6e-58 195.6 1.5 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI Ribul_P_3_epim PF00834.14 gi|452211749|ref|YP_007491863.1| - 0.00065 18.8 0.7 0.0013 17.8 0.1 1.8 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family NanE PF04131.9 gi|452211749|ref|YP_007491863.1| - 0.0011 17.9 1.7 0.0014 17.5 0.6 1.7 1 1 1 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase QRPTase_C PF01729.14 gi|452211749|ref|YP_007491863.1| - 0.0083 15.6 0.2 0.025 14.0 0.1 1.8 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain Oxidored_FMN PF00724.15 gi|452211749|ref|YP_007491863.1| - 0.054 12.4 0.6 0.36 9.7 0.1 2.0 1 1 0 2 2 2 0 NADH:flavin oxidoreductase / NADH oxidase family PcrB PF01884.12 gi|452211749|ref|YP_007491863.1| - 0.059 12.6 5.8 0.4 9.8 0.5 2.6 2 1 1 3 3 3 0 PcrB family His_biosynth PF00977.16 gi|452211749|ref|YP_007491863.1| - 0.11 11.8 6.1 0.14 11.3 0.4 2.2 1 1 1 2 2 2 0 Histidine biosynthesis protein DUF308 PF03729.8 gi|452211751|ref|YP_007491865.1| - 9.1e-15 54.4 44.9 7.5e-11 41.8 10.1 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) DUF1776 PF08643.5 gi|452211752|ref|YP_007491866.1| - 0.083 12.0 0.1 0.083 12.0 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Fer2 PF00111.22 gi|452211753|ref|YP_007491867.1| - 0.042 13.5 0.5 0.063 13.0 0.3 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Radical_SAM PF04055.16 gi|452211754|ref|YP_007491868.1| - 2.4e-16 60.3 0.0 4.4e-15 56.2 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|452211754|ref|YP_007491868.1| - 1.9e-10 41.0 0.0 3.6e-10 40.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|452211754|ref|YP_007491868.1| - 2.7e-07 30.6 0.0 7.2e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF308 PF03729.8 gi|452211755|ref|YP_007491869.1| - 0.00021 21.1 3.4 0.00021 21.1 2.3 1.0 1 0 0 1 1 1 1 Short repeat of unknown function (DUF308) DUF4190 PF13828.1 gi|452211755|ref|YP_007491869.1| - 0.0048 16.4 2.2 0.0066 15.9 1.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4190) DUF3185 PF11381.3 gi|452211755|ref|YP_007491869.1| - 0.41 10.4 5.4 0.21 11.3 2.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3185) DUF131 PF01998.12 gi|452211756|ref|YP_007491870.1| - 0.07 12.4 0.2 0.07 12.4 0.2 2.6 3 1 1 4 4 4 0 Protein of unknown function DUF131 NB-ARC PF00931.17 gi|452211757|ref|YP_007491871.1| - 2.8e-16 59.2 0.0 4.9e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain RuvB_N PF05496.7 gi|452211757|ref|YP_007491871.1| - 0.091 11.7 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus ABC_tran PF00005.22 gi|452211757|ref|YP_007491871.1| - 0.12 12.6 0.3 0.3 11.3 0.1 1.8 1 1 1 2 2 2 0 ABC transporter AAA_16 PF13191.1 gi|452211757|ref|YP_007491871.1| - 0.16 11.8 0.6 0.79 9.6 0.1 2.2 2 1 1 3 3 3 0 AAA ATPase domain NACHT PF05729.7 gi|452211757|ref|YP_007491871.1| - 0.17 11.5 1.8 1.6 8.3 1.3 2.4 1 1 0 1 1 1 0 NACHT domain DDE_Tnp_IS66 PF03050.9 gi|452211758|ref|YP_007491872.1| - 1.9e-22 79.7 0.5 2.1e-22 79.6 0.3 1.0 1 0 0 1 1 1 1 Transposase IS66 family Imm25 PF15571.1 gi|452211759|ref|YP_007491873.1| - 0.0039 17.2 0.3 0.009 16.1 0.2 1.7 1 0 0 1 1 1 1 Immunity protein 25 DUF3357 PF11837.3 gi|452211762|ref|YP_007491876.1| - 0.015 15.1 0.0 0.066 13.0 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3357) Endonuc_Holl PF10107.4 gi|452211763|ref|YP_007491877.1| - 1.9e-65 219.3 0.2 2.3e-65 219.0 0.2 1.0 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase Med26 PF08711.6 gi|452211763|ref|YP_007491877.1| - 0.12 11.8 0.2 6.7 6.3 0.0 2.3 1 1 1 2 2 2 0 TFIIS helical bundle-like domain MS_channel PF00924.13 gi|452211765|ref|YP_007491879.1| - 4.9e-37 127.2 0.1 6.3e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF4293 PF14126.1 gi|452211765|ref|YP_007491879.1| - 0.09 12.6 0.4 0.16 11.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) DUF421 PF04239.7 gi|452211766|ref|YP_007491880.1| - 1.2e-18 66.4 0.1 1.6e-18 66.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF421) YpzI PF14140.1 gi|452211766|ref|YP_007491880.1| - 0.033 13.6 0.0 0.059 12.8 0.0 1.4 1 0 0 1 1 1 0 YpzI-like protein MS_channel PF00924.13 gi|452211767|ref|YP_007491881.1| - 7.8e-29 100.4 3.5 1.7e-28 99.4 2.4 1.5 1 1 0 1 1 1 1 Mechanosensitive ion channel AzlC PF03591.9 gi|452211768|ref|YP_007491882.1| - 9.9e-45 151.9 7.6 9.9e-45 151.9 5.3 1.7 2 0 0 2 2 2 1 AzlC protein Sulfate_tra_GLY PF13792.1 gi|452211768|ref|YP_007491882.1| - 1.9 8.2 7.1 0.24 11.1 1.6 2.1 2 0 0 2 2 2 0 Sulfate transporter N-terminal domain with GLY motif AzlD PF05437.7 gi|452211769|ref|YP_007491883.1| - 9.3e-22 76.8 6.2 1e-21 76.6 4.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) NIR_SIR PF01077.17 gi|452211770|ref|YP_007491884.1| - 2.1e-36 124.6 0.4 3.1e-36 124.0 0.3 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|452211770|ref|YP_007491884.1| - 4.4e-20 71.0 0.0 8.1e-20 70.2 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.22 gi|452211770|ref|YP_007491884.1| - 3e-13 48.7 13.3 4.1e-07 29.3 1.6 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211770|ref|YP_007491884.1| - 5.7e-10 39.4 29.3 1.4e-08 34.9 9.0 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211770|ref|YP_007491884.1| - 2.5e-09 36.8 13.4 2.5e-09 36.8 9.3 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211770|ref|YP_007491884.1| - 2.8e-09 36.4 18.6 2.3e-05 24.0 1.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452211770|ref|YP_007491884.1| - 1.1e-07 32.0 12.7 1.1e-07 32.0 8.8 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211770|ref|YP_007491884.1| - 2.9e-06 26.8 14.5 9.6e-05 22.0 2.7 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|452211770|ref|YP_007491884.1| - 2.8e-05 23.8 23.2 0.0014 18.4 3.0 2.9 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|452211770|ref|YP_007491884.1| - 0.00061 19.7 17.1 0.025 14.5 0.1 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452211770|ref|YP_007491884.1| - 0.0023 18.4 0.4 0.0023 18.4 0.3 4.1 4 1 0 4 4 4 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|452211770|ref|YP_007491884.1| - 0.0055 16.9 13.6 0.017 15.3 2.6 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452211770|ref|YP_007491884.1| - 0.022 15.1 4.4 0.022 15.1 3.1 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452211770|ref|YP_007491884.1| - 0.03 14.8 24.4 0.17 12.5 3.3 3.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211770|ref|YP_007491884.1| - 0.045 14.4 21.2 0.11 13.3 2.2 2.9 2 2 1 3 3 2 0 4Fe-4S double cluster binding domain DUF561 PF04481.7 gi|452211770|ref|YP_007491884.1| - 0.1 11.5 0.0 0.17 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Fer4_13 PF13370.1 gi|452211770|ref|YP_007491884.1| - 1.9 8.9 19.1 1 9.7 2.5 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|452211770|ref|YP_007491884.1| - 2.5 8.5 22.0 1.4 9.3 1.7 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain 7TM_GPCR_Srt PF10321.4 gi|452211772|ref|YP_007491886.1| - 0.078 11.7 0.0 0.094 11.4 0.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt DUF342 PF03961.8 gi|452211773|ref|YP_007491887.1| - 0.00061 18.3 14.9 0.0024 16.3 3.5 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF342) Nitroreductase PF00881.19 gi|452211774|ref|YP_007491888.1| - 8.4e-35 120.0 0.0 9.8e-35 119.8 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family Hexapep PF00132.19 gi|452211775|ref|YP_007491889.1| - 3.4e-11 42.0 12.2 3.2e-08 32.7 2.3 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|452211775|ref|YP_007491889.1| - 0.00082 18.8 10.0 0.014 14.9 2.2 2.7 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase FeThRed_B PF02943.10 gi|452211777|ref|YP_007491891.1| - 9.6e-23 79.9 0.8 9.6e-23 79.9 0.5 1.5 2 0 0 2 2 2 1 Ferredoxin thioredoxin reductase catalytic beta chain RecR PF02132.10 gi|452211777|ref|YP_007491891.1| - 0.01 15.2 0.6 0.021 14.2 0.4 1.5 1 0 0 1 1 1 0 RecR protein HypA PF01155.14 gi|452211777|ref|YP_007491891.1| - 0.038 13.6 1.0 0.038 13.6 0.7 2.0 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Rubredoxin PF00301.15 gi|452211777|ref|YP_007491891.1| - 3.5 7.5 17.7 1.6 8.6 5.7 3.6 2 1 0 2 2 2 0 Rubredoxin Glutaredoxin PF00462.19 gi|452211778|ref|YP_007491892.1| - 1.8e-12 47.0 0.1 2.8e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.1 gi|452211778|ref|YP_007491892.1| - 0.00071 19.7 0.0 0.00087 19.4 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.1 gi|452211778|ref|YP_007491892.1| - 0.0061 16.3 0.3 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Thioredoxin domain ArsC PF03960.10 gi|452211778|ref|YP_007491892.1| - 0.029 14.4 0.0 1.5 8.8 0.0 2.1 2 0 0 2 2 2 0 ArsC family GST_N_2 PF13409.1 gi|452211778|ref|YP_007491892.1| - 0.038 13.9 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.1 gi|452211778|ref|YP_007491892.1| - 0.14 12.3 0.1 0.24 11.6 0.1 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain MFS_1 PF07690.11 gi|452211779|ref|YP_007491893.1| - 1.3e-70 237.8 70.6 1.2e-56 191.9 29.8 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|452211779|ref|YP_007491893.1| - 7.4e-13 47.8 14.9 7.4e-13 47.8 10.3 2.6 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.1 gi|452211779|ref|YP_007491893.1| - 1.9e-08 33.1 40.5 1.6e-05 23.5 15.9 2.8 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_3 PF05977.8 gi|452211779|ref|YP_007491893.1| - 8.3e-08 30.7 4.6 8.3e-08 30.7 3.2 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector PUCC PF03209.10 gi|452211779|ref|YP_007491893.1| - 7.4e-06 24.9 17.1 2.1e-05 23.4 3.9 2.4 2 1 0 2 2 2 2 PUCC protein MFS_1_like PF12832.2 gi|452211779|ref|YP_007491893.1| - 1.7e-05 24.4 1.4 0.00089 19.0 0.1 3.1 2 0 0 2 2 2 1 MFS_1 like family OATP PF03137.15 gi|452211779|ref|YP_007491893.1| - 0.87 7.5 20.5 0.17 9.9 1.1 3.5 2 2 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF21 PF01595.15 gi|452211781|ref|YP_007491895.1| - 1.2e-35 122.4 1.1 1.6e-35 122.0 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF21 DUF21 PF01595.15 gi|452211782|ref|YP_007491896.1| - 8.3e-51 171.8 7.2 1.2e-50 171.3 5.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF21 CorC_HlyC PF03471.12 gi|452211782|ref|YP_007491896.1| - 1.3e-20 72.9 0.0 3.4e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.23 gi|452211782|ref|YP_007491896.1| - 8.9e-20 70.2 1.1 7.1e-09 35.3 0.0 2.6 2 0 0 2 2 2 2 CBS domain DJ-1_PfpI PF01965.19 gi|452211783|ref|YP_007491897.1| - 1.7e-31 108.6 0.1 2.1e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|452211783|ref|YP_007491897.1| - 6.1e-11 41.8 0.0 7.9e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 Putative amidotransferase Exonuc_VII_L PF02601.10 gi|452211783|ref|YP_007491897.1| - 0.016 14.4 0.1 0.023 13.9 0.1 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit PS_pyruv_trans PF04230.8 gi|452211783|ref|YP_007491897.1| - 0.069 12.8 0.0 0.079 12.6 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF92 PF01940.11 gi|452211784|ref|YP_007491898.1| - 7e-69 231.4 15.7 7e-69 231.4 10.9 2.3 2 1 0 2 2 2 1 Integral membrane protein DUF92 AgrB PF04647.10 gi|452211784|ref|YP_007491898.1| - 2.5 7.1 19.0 0.096 11.7 6.6 3.0 2 1 1 3 3 3 0 Accessory gene regulator B Pyr_redox_2 PF07992.9 gi|452211785|ref|YP_007491899.1| - 8.5e-29 100.8 0.0 3.5e-26 92.3 0.0 3.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|452211785|ref|YP_007491899.1| - 3.9e-21 75.1 1.4 1.5e-20 73.2 0.1 2.5 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|452211785|ref|YP_007491899.1| - 1.6e-12 47.6 0.3 4.8e-12 46.1 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.1 gi|452211785|ref|YP_007491899.1| - 0.00015 20.8 0.1 0.14 11.0 0.1 2.4 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.19 gi|452211785|ref|YP_007491899.1| - 0.035 12.9 0.0 0.063 12.1 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Helicase_C_2 PF13307.1 gi|452211786|ref|YP_007491900.1| - 1e-22 80.8 0.0 1.8e-22 80.0 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.10 gi|452211786|ref|YP_007491900.1| - 1.7e-07 31.2 0.1 8.9e-07 28.9 0.0 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.10 gi|452211786|ref|YP_007491900.1| - 0.0012 18.2 0.0 0.0027 17.1 0.0 1.6 1 0 0 1 1 1 1 DEAD_2 MeMO_Hyd_G PF02964.11 gi|452211786|ref|YP_007491900.1| - 0.015 15.1 0.9 0.13 12.1 0.1 2.5 1 1 1 2 2 2 0 Methane monooxygenase, hydrolase gamma chain DEAD PF00270.24 gi|452211786|ref|YP_007491900.1| - 0.035 13.5 0.3 0.18 11.3 0.1 2.3 2 1 0 2 2 2 0 DEAD/DEAH box helicase T2SE PF00437.15 gi|452211786|ref|YP_007491900.1| - 0.099 11.5 0.5 0.22 10.3 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein Pyrophosphatase PF00719.14 gi|452211787|ref|YP_007491901.1| - 7.9e-09 35.1 0.0 1.1e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Radical_SAM PF04055.16 gi|452211788|ref|YP_007491902.1| - 1e-17 64.8 0.5 1.6e-17 64.2 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.1 gi|452211788|ref|YP_007491902.1| - 8.1e-07 29.2 0.6 8.1e-07 29.2 0.4 1.9 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.1 gi|452211788|ref|YP_007491902.1| - 6.2e-06 26.2 0.0 1.2e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|452211788|ref|YP_007491902.1| - 6.1e-05 23.1 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Metallophos PF00149.23 gi|452211789|ref|YP_007491903.1| - 3.4e-07 29.8 1.6 2.4e-06 27.0 1.1 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|452211789|ref|YP_007491903.1| - 1.4e-06 28.1 0.0 2.5e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain CoA_binding_2 PF13380.1 gi|452211789|ref|YP_007491903.1| - 0.0022 18.1 0.0 0.017 15.3 0.0 2.2 2 1 1 3 3 3 1 CoA binding domain DUF3508 PF12018.3 gi|452211790|ref|YP_007491904.1| - 0.019 13.9 0.1 0.024 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3508) Pox_A28 PF04584.9 gi|452211791|ref|YP_007491905.1| - 0.17 11.7 1.8 0.2 11.4 1.3 1.3 1 1 0 1 1 1 0 Poxvirus A28 family DUF4234 PF14018.1 gi|452211791|ref|YP_007491905.1| - 0.2 11.4 4.1 0.39 10.4 2.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) DUF3021 PF11457.3 gi|452211791|ref|YP_007491905.1| - 0.21 11.4 2.7 0.27 11.1 1.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3021) CBM_X2 PF03442.9 gi|452211792|ref|YP_007491906.1| - 0.0016 18.2 0.3 0.0038 17.0 0.1 1.7 2 0 0 2 2 2 1 Carbohydrate binding domain X2 Big_3 PF07523.7 gi|452211792|ref|YP_007491906.1| - 0.15 12.1 3.5 0.38 10.8 0.1 2.5 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Flavin_Reduct PF01613.13 gi|452211794|ref|YP_007491908.1| - 3.6e-21 75.6 0.0 4.8e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.7 gi|452211794|ref|YP_007491908.1| - 0.046 13.2 0.0 0.067 12.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF447) UvrB PF12344.3 gi|452211795|ref|YP_007491909.1| - 2.4e-21 74.9 1.7 2.4e-21 74.9 1.2 2.1 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.26 gi|452211795|ref|YP_007491909.1| - 1.5e-15 56.8 0.0 3.2e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452211795|ref|YP_007491909.1| - 4e-14 52.8 0.5 1.2e-12 48.0 0.0 2.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.14 gi|452211795|ref|YP_007491909.1| - 2.5e-08 33.1 2.3 2.5e-08 33.1 1.6 2.6 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.24 gi|452211795|ref|YP_007491909.1| - 1.7e-06 27.6 0.1 0.00026 20.5 0.0 3.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_19 PF13245.1 gi|452211795|ref|YP_007491909.1| - 0.00032 20.3 0.0 0.0042 16.7 0.0 2.5 2 0 0 2 2 2 1 Part of AAA domain AAA_30 PF13604.1 gi|452211795|ref|YP_007491909.1| - 0.0038 16.8 0.1 0.21 11.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|452211795|ref|YP_007491909.1| - 0.0051 16.9 0.1 3.1 7.9 0.0 3.8 3 1 1 4 4 4 1 AAA domain Kinesin PF00225.18 gi|452211795|ref|YP_007491909.1| - 0.032 12.9 0.0 0.056 12.1 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain Ribonuc_red_lgN PF00317.16 gi|452211795|ref|YP_007491909.1| - 0.047 13.4 0.1 0.3 10.9 0.0 2.4 3 1 0 3 3 3 0 Ribonucleotide reductase, all-alpha domain Flavi_DEAD PF07652.9 gi|452211795|ref|YP_007491909.1| - 0.054 13.2 0.6 0.28 10.9 0.1 2.4 3 0 0 3 3 3 0 Flavivirus DEAD domain DUF87 PF01935.12 gi|452211795|ref|YP_007491909.1| - 0.061 13.1 3.2 0.1 12.3 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function DUF87 AAA PF00004.24 gi|452211795|ref|YP_007491909.1| - 0.073 13.2 0.9 3.1 8.0 0.0 3.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|452211795|ref|YP_007491909.1| - 0.075 13.0 0.0 0.72 9.8 0.0 2.5 3 0 0 3 3 3 0 AAA ATPase domain UvrC_HhH_N PF08459.6 gi|452211796|ref|YP_007491910.1| - 1.5e-56 190.1 0.2 3.3e-56 189.1 0.0 1.7 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 gi|452211796|ref|YP_007491910.1| - 6.4e-10 39.2 1.0 3e-09 37.0 0.0 2.7 4 0 0 4 4 4 1 GIY-YIG catalytic domain UVR PF02151.14 gi|452211796|ref|YP_007491910.1| - 9.1e-08 31.3 7.8 2.5e-07 30.0 5.4 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif ABC_tran PF00005.22 gi|452211797|ref|YP_007491911.1| - 9.7e-21 74.4 1.6 1.6e-08 34.9 0.0 4.5 4 1 0 4 4 3 3 ABC transporter SMC_N PF02463.14 gi|452211797|ref|YP_007491911.1| - 2.1e-11 43.4 0.0 0.00056 19.2 0.0 3.9 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|452211797|ref|YP_007491911.1| - 1.2e-08 34.3 0.4 0.0072 15.8 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.1 gi|452211797|ref|YP_007491911.1| - 1.4e-08 35.0 7.9 0.047 13.6 0.0 4.8 6 0 0 6 6 4 2 AAA domain AAA_16 PF13191.1 gi|452211797|ref|YP_007491911.1| - 9.3e-08 32.2 0.1 0.013 15.5 0.0 3.5 3 0 0 3 3 3 2 AAA ATPase domain AAA_14 PF13173.1 gi|452211797|ref|YP_007491911.1| - 6.3e-07 29.3 0.1 0.11 12.3 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_25 PF13481.1 gi|452211797|ref|YP_007491911.1| - 2.5e-06 27.0 0.0 0.092 12.1 0.0 3.0 2 0 0 2 2 2 2 AAA domain DnaJ_CXXCXGXG PF00684.14 gi|452211797|ref|YP_007491911.1| - 8.1e-06 25.7 6.1 0.0089 16.0 0.3 3.8 3 0 0 3 3 3 1 DnaJ central domain AAA_22 PF13401.1 gi|452211797|ref|YP_007491911.1| - 8.5e-06 25.9 2.3 0.38 10.9 0.0 4.2 4 0 0 4 4 4 2 AAA domain AAA_23 PF13476.1 gi|452211797|ref|YP_007491911.1| - 1.5e-05 25.4 11.0 0.018 15.3 0.0 3.4 3 1 0 3 3 3 2 AAA domain DUF258 PF03193.11 gi|452211797|ref|YP_007491911.1| - 2e-05 23.8 0.1 0.16 11.1 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|452211797|ref|YP_007491911.1| - 2e-05 24.8 0.3 0.083 13.2 0.1 3.2 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.13 gi|452211797|ref|YP_007491911.1| - 3.6e-05 23.4 0.1 0.072 12.6 0.0 2.7 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.1 gi|452211797|ref|YP_007491911.1| - 5.4e-05 23.0 0.0 0.46 10.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|452211797|ref|YP_007491911.1| - 7.9e-05 22.3 1.5 0.45 10.3 0.0 3.3 3 0 0 3 3 2 2 Part of AAA domain AAA_15 PF13175.1 gi|452211797|ref|YP_007491911.1| - 8.5e-05 21.7 0.2 0.39 9.7 0.0 4.1 4 0 0 4 4 4 1 AAA ATPase domain DUF2075 PF09848.4 gi|452211797|ref|YP_007491911.1| - 0.00022 20.3 0.1 0.28 10.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) cobW PF02492.14 gi|452211797|ref|YP_007491911.1| - 0.00026 20.4 0.3 0.079 12.3 0.1 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain KaiC PF06745.8 gi|452211797|ref|YP_007491911.1| - 0.00032 19.9 2.5 0.15 11.1 0.0 3.5 4 0 0 4 4 3 1 KaiC Arch_ATPase PF01637.13 gi|452211797|ref|YP_007491911.1| - 0.00046 19.9 0.9 1.1 8.8 0.0 3.2 3 0 0 3 3 3 2 Archaeal ATPase AAA_10 PF12846.2 gi|452211797|ref|YP_007491911.1| - 0.00048 19.6 0.1 1.2 8.5 0.0 3.0 2 1 0 2 2 2 2 AAA-like domain T2SE PF00437.15 gi|452211797|ref|YP_007491911.1| - 0.00051 19.0 0.2 0.83 8.4 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein APS_kinase PF01583.15 gi|452211797|ref|YP_007491911.1| - 0.00091 18.9 0.2 0.98 9.0 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase PRK PF00485.13 gi|452211797|ref|YP_007491911.1| - 0.0017 17.9 0.2 0.97 8.9 0.0 2.8 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family NACHT PF05729.7 gi|452211797|ref|YP_007491911.1| - 0.0018 17.9 0.2 1.1 8.8 0.0 2.4 2 0 0 2 2 2 1 NACHT domain RNA_helicase PF00910.17 gi|452211797|ref|YP_007491911.1| - 0.002 18.2 0.2 0.6 10.2 0.0 2.9 3 0 0 3 3 2 1 RNA helicase BCA_ABC_TP_C PF12399.3 gi|452211797|ref|YP_007491911.1| - 0.0021 17.6 5.3 0.22 11.2 0.1 2.7 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter MMR_HSR1 PF01926.18 gi|452211797|ref|YP_007491911.1| - 0.0055 16.6 0.7 1 9.3 0.1 3.6 4 0 0 4 4 3 1 50S ribosome-binding GTPase MobB PF03205.9 gi|452211797|ref|YP_007491911.1| - 0.008 15.8 1.7 2.1 8.0 0.5 2.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|452211797|ref|YP_007491911.1| - 0.0086 14.8 0.2 4.3 6.0 0.0 2.7 2 0 0 2 2 2 0 ArgK protein Miro PF08477.8 gi|452211797|ref|YP_007491911.1| - 0.01 16.3 1.1 5 7.6 0.0 3.9 5 0 0 5 5 3 0 Miro-like protein AAA_28 PF13521.1 gi|452211797|ref|YP_007491911.1| - 0.021 14.7 0.1 4.9 7.0 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|452211797|ref|YP_007491911.1| - 0.022 14.3 0.1 6.3 6.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain DAP3 PF10236.4 gi|452211797|ref|YP_007491911.1| - 0.024 13.5 0.1 2.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 NTPase_1 PF03266.10 gi|452211797|ref|YP_007491911.1| - 0.055 13.1 3.0 7.4 6.2 0.0 3.0 3 0 0 3 3 2 0 NTPase KTI12 PF08433.5 gi|452211797|ref|YP_007491911.1| - 0.06 12.5 0.0 9.2 5.3 0.0 2.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Lar_restr_allev PF14354.1 gi|452211797|ref|YP_007491911.1| - 0.084 13.1 7.4 4.5 7.6 0.1 3.5 3 0 0 3 3 3 0 Restriction alleviation protein Lar AAA_17 PF13207.1 gi|452211797|ref|YP_007491911.1| - 0.24 12.2 18.8 0.077 13.8 0.8 4.5 5 0 0 5 5 3 0 AAA domain Zn-ribbon_8 PF09723.5 gi|452211797|ref|YP_007491911.1| - 1.9 8.4 10.7 2.6 8.0 0.4 3.7 3 0 0 3 3 3 0 Zinc ribbon domain DrsE PF02635.10 gi|452211798|ref|YP_007491912.1| - 7.9e-09 35.6 0.0 9.3e-09 35.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family Fer4 PF00037.22 gi|452211800|ref|YP_007491914.1| - 3.4e-08 32.7 9.2 9.1e-06 25.0 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211800|ref|YP_007491914.1| - 3e-07 31.0 10.0 9.9e-07 29.4 7.0 1.9 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|452211800|ref|YP_007491914.1| - 1.3e-06 28.1 9.4 3.5e-06 26.7 6.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211800|ref|YP_007491914.1| - 1.3e-06 27.9 7.4 0.00099 18.8 1.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211800|ref|YP_007491914.1| - 1.8e-06 27.8 2.0 0.0036 17.2 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|452211800|ref|YP_007491914.1| - 3.8e-06 27.1 7.9 7.7e-06 26.1 5.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211800|ref|YP_007491914.1| - 1.4e-05 25.2 20.3 0.00087 19.5 7.3 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|452211800|ref|YP_007491914.1| - 0.0002 21.7 4.8 0.022 15.1 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452211800|ref|YP_007491914.1| - 0.00031 21.0 13.2 0.012 16.1 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|452211800|ref|YP_007491914.1| - 0.00055 19.7 9.6 0.026 14.4 1.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|452211800|ref|YP_007491914.1| - 0.00065 19.8 9.2 0.0094 16.2 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452211800|ref|YP_007491914.1| - 0.0014 18.8 8.2 0.27 11.5 4.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Dehalogenase PF13486.1 gi|452211800|ref|YP_007491914.1| - 0.014 14.8 0.0 0.022 14.2 0.0 1.3 1 0 0 1 1 1 0 Reductive dehalogenase subunit Fer4_21 PF14697.1 gi|452211800|ref|YP_007491914.1| - 0.042 13.7 10.6 0.14 12.0 7.3 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452211800|ref|YP_007491914.1| - 0.38 11.1 5.7 6.8 7.1 1.6 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF2061 PF09834.4 gi|452211801|ref|YP_007491915.1| - 0.2 11.8 0.4 0.2 11.8 0.3 2.7 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) GWT1 PF06423.7 gi|452211801|ref|YP_007491915.1| - 0.74 9.9 6.3 7.3 6.6 3.7 2.4 1 1 0 1 1 1 0 GWT1 Mrr_cat PF04471.7 gi|452211802|ref|YP_007491916.1| - 1.3e-30 105.5 0.0 1.5e-30 105.3 0.0 1.0 1 0 0 1 1 1 1 Restriction endonuclease PAS_3 PF08447.6 gi|452211803|ref|YP_007491917.1| - 4.9e-39 132.3 0.3 7.9e-19 67.5 0.3 3.6 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.7 gi|452211803|ref|YP_007491917.1| - 4.3e-32 109.7 2.8 4.3e-32 109.7 2.0 2.0 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|452211803|ref|YP_007491917.1| - 7.7e-32 109.7 0.0 4.1e-11 43.1 0.0 4.0 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|452211803|ref|YP_007491917.1| - 2.9e-22 78.5 0.0 3.3e-06 26.8 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|452211803|ref|YP_007491917.1| - 1.4e-18 66.9 0.0 4.7e-09 36.2 0.0 4.6 4 1 0 4 4 4 3 PAS fold GAF_3 PF13492.1 gi|452211803|ref|YP_007491917.1| - 1.5e-10 41.2 0.0 4.6e-10 39.6 0.0 1.9 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.1 gi|452211803|ref|YP_007491917.1| - 3.6e-07 30.7 0.0 7.4e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.1 gi|452211803|ref|YP_007491917.1| - 1.5e-05 24.9 0.0 0.043 13.7 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|452211803|ref|YP_007491917.1| - 5.8e-05 22.7 0.0 0.0002 21.0 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|452211803|ref|YP_007491917.1| - 9.5e-05 22.7 0.5 0.00018 21.8 0.3 1.5 1 0 0 1 1 1 1 HWE histidine kinase GAF PF01590.21 gi|452211803|ref|YP_007491917.1| - 0.00032 20.8 0.0 0.00084 19.4 0.0 1.7 1 1 0 1 1 1 1 GAF domain PAS_10 PF13596.1 gi|452211803|ref|YP_007491917.1| - 0.13 12.5 0.0 1 9.6 0.0 2.6 2 0 0 2 2 2 0 PAS domain Rubredoxin PF00301.15 gi|452211805|ref|YP_007491919.1| - 9.2e-21 73.4 0.5 1e-20 73.3 0.3 1.0 1 0 0 1 1 1 1 Rubredoxin zf-ribbon_3 PF13248.1 gi|452211805|ref|YP_007491919.1| - 0.0004 19.5 1.3 0.31 10.2 0.0 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|452211805|ref|YP_007491919.1| - 0.00088 18.6 1.3 0.57 9.7 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|452211805|ref|YP_007491919.1| - 0.0012 18.1 0.4 0.66 9.3 0.0 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding TFIIS_C PF01096.13 gi|452211805|ref|YP_007491919.1| - 0.0035 16.9 1.8 0.38 10.4 0.1 2.1 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) Zn-ribbon_8 PF09723.5 gi|452211805|ref|YP_007491919.1| - 0.004 17.0 0.9 2.1 8.3 0.1 2.2 2 0 0 2 2 2 2 Zinc ribbon domain zf-C2H2_3 PF13878.1 gi|452211805|ref|YP_007491919.1| - 0.006 16.1 0.8 0.22 11.0 0.1 2.1 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO zf-HIT PF04438.11 gi|452211805|ref|YP_007491919.1| - 0.0064 16.1 5.4 0.48 10.1 0.0 2.1 2 0 0 2 2 2 1 HIT zinc finger OrfB_Zn_ribbon PF07282.6 gi|452211805|ref|YP_007491919.1| - 0.0065 16.0 1.5 0.37 10.4 1.0 2.1 1 1 0 1 1 1 1 Putative transposase DNA-binding domain UPF0547 PF10571.4 gi|452211805|ref|YP_007491919.1| - 0.0072 16.0 1.4 1.1 8.9 0.0 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zinc_ribbon_4 PF13717.1 gi|452211805|ref|YP_007491919.1| - 0.0072 15.9 0.2 2.3 7.9 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|452211805|ref|YP_007491919.1| - 0.008 15.7 0.2 2.7 7.6 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DUF35_N PF12172.3 gi|452211805|ref|YP_007491919.1| - 0.013 15.3 0.7 3.9 7.5 0.0 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ISL3 PF14690.1 gi|452211805|ref|YP_007491919.1| - 0.016 15.2 0.6 2.6 8.1 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-Sec23_Sec24 PF04810.10 gi|452211805|ref|YP_007491919.1| - 0.017 14.7 3.2 0.73 9.4 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger DUF2296 PF10058.4 gi|452211805|ref|YP_007491919.1| - 0.018 14.7 1.9 3.4 7.4 0.0 2.1 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Mu-like_Com PF10122.4 gi|452211805|ref|YP_007491919.1| - 0.022 13.8 1.0 0.96 8.5 0.0 2.1 2 0 0 2 2 2 0 Mu-like prophage protein Com Zn_Tnp_IS1595 PF12760.2 gi|452211805|ref|YP_007491919.1| - 0.023 14.4 1.9 0.98 9.2 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-RanBP PF00641.13 gi|452211805|ref|YP_007491919.1| - 0.027 13.5 4.7 0.075 12.1 0.4 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Elf1 PF05129.8 gi|452211805|ref|YP_007491919.1| - 0.03 14.0 0.5 0.33 10.6 0.0 2.0 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-Mss51 PF13824.1 gi|452211805|ref|YP_007491919.1| - 0.048 13.5 0.6 1.3 8.9 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1936 PF09151.5 gi|452211805|ref|YP_007491919.1| - 0.053 13.0 2.7 3.8 7.1 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) DUF1610 PF07754.6 gi|452211805|ref|YP_007491919.1| - 0.058 13.5 3.1 3.8 7.7 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-TFIIB PF13453.1 gi|452211805|ref|YP_007491919.1| - 0.063 12.4 2.1 1.4 8.2 0.1 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger DZR PF12773.2 gi|452211805|ref|YP_007491919.1| - 0.087 12.6 2.1 5.5 6.9 1.6 2.0 1 1 1 2 2 2 0 Double zinc ribbon zf-tcix PF14952.1 gi|452211805|ref|YP_007491919.1| - 0.14 11.5 2.0 3.1 7.1 0.2 2.1 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-H2C2_2 PF13465.1 gi|452211805|ref|YP_007491919.1| - 0.16 12.3 1.7 5.2 7.5 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_4 PF13894.1 gi|452211805|ref|YP_007491919.1| - 0.2 12.0 1.0 6.9 7.2 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DUF4379 PF14311.1 gi|452211805|ref|YP_007491919.1| - 0.26 11.1 2.0 4.8 7.0 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) Desulfoferrod_N PF06397.7 gi|452211805|ref|YP_007491919.1| - 0.26 10.6 1.1 4.7 6.6 0.2 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain ADK_lid PF05191.9 gi|452211805|ref|YP_007491919.1| - 0.32 10.7 2.3 1.6 8.4 1.6 1.9 1 1 0 1 1 1 0 Adenylate kinase, active site lid zf-NADH-PPase PF09297.6 gi|452211805|ref|YP_007491919.1| - 0.5 9.9 4.5 3.4 7.2 0.0 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-C2H2 PF00096.21 gi|452211805|ref|YP_007491919.1| - 0.7 10.3 3.6 12 6.4 0.4 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type PHD_2 PF13831.1 gi|452211805|ref|YP_007491919.1| - 1.1 8.6 3.8 0.82 9.0 0.2 2.0 2 0 0 2 2 2 0 PHD-finger Zn_Tnp_IS1 PF03811.8 gi|452211805|ref|YP_007491919.1| - 4.3 6.9 5.4 12 5.4 0.2 2.2 2 0 0 2 2 2 0 InsA N-terminal domain ELFV_dehydrog PF00208.16 gi|452211806|ref|YP_007491920.1| - 8.3e-52 176.1 0.1 9.1e-52 176.0 0.1 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|452211807|ref|YP_007491921.1| - 1.2e-46 157.4 0.0 1.6e-46 157.0 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FAD_binding_3 PF01494.14 gi|452211808|ref|YP_007491922.1| - 2.8e-14 52.9 6.1 6e-09 35.4 1.7 3.6 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|452211808|ref|YP_007491922.1| - 2.7e-10 39.9 0.7 3.9e-10 39.3 0.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.19 gi|452211808|ref|YP_007491922.1| - 6.7e-10 38.3 0.9 4.7e-06 25.7 0.5 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.12 gi|452211808|ref|YP_007491922.1| - 1.3e-08 34.2 0.1 2.5e-08 33.2 0.0 1.5 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.9 gi|452211808|ref|YP_007491922.1| - 1.8e-06 27.9 0.8 1.8e-06 27.9 0.5 1.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|452211808|ref|YP_007491922.1| - 6e-06 24.9 0.3 1.1e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|452211808|ref|YP_007491922.1| - 8.5e-06 24.9 0.1 0.0038 16.1 0.0 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|452211808|ref|YP_007491922.1| - 1e-05 25.4 0.1 2.7e-05 24.1 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|452211808|ref|YP_007491922.1| - 0.00018 20.4 0.7 0.00031 19.7 0.5 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.9 gi|452211808|ref|YP_007491922.1| - 0.00031 19.4 0.4 0.17 10.4 0.4 2.8 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.19 gi|452211808|ref|YP_007491922.1| - 0.003 16.4 1.2 0.0055 15.6 0.8 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|452211808|ref|YP_007491922.1| - 0.014 15.4 0.5 0.028 14.4 0.3 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|452211808|ref|YP_007491922.1| - 0.052 13.1 0.2 0.1 12.2 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|452211808|ref|YP_007491922.1| - 0.059 13.7 1.5 0.49 10.8 0.2 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.16 gi|452211808|ref|YP_007491922.1| - 0.12 12.2 0.1 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 ThiF family UPF0118 PF01594.11 gi|452211810|ref|YP_007491924.1| - 6.7e-42 143.6 41.7 8e-42 143.3 28.9 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 PetG PF02529.10 gi|452211810|ref|YP_007491924.1| - 0.033 13.7 1.1 4.7 6.8 0.1 3.0 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 Rad33 PF08730.5 gi|452211810|ref|YP_007491924.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 Rad33 tRNA-Thr_ED PF08915.6 gi|452211811|ref|YP_007491925.1| - 6.5e-56 188.1 0.5 1.2e-55 187.2 0.3 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|452211811|ref|YP_007491925.1| - 6.7e-24 84.3 1.2 1.3e-23 83.4 0.9 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|452211811|ref|YP_007491925.1| - 4.7e-18 64.9 1.5 4.7e-18 64.9 1.1 2.0 2 0 0 2 2 2 1 Anticodon binding domain Heme_oxygenase PF01126.15 gi|452211811|ref|YP_007491925.1| - 0.019 14.5 0.1 0.044 13.3 0.1 1.6 1 0 0 1 1 1 0 Heme oxygenase Helicase_C PF00271.26 gi|452211813|ref|YP_007491927.1| - 5.5e-08 32.5 0.0 1.6e-07 31.1 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|452211813|ref|YP_007491927.1| - 0.0036 17.1 0.0 0.0072 16.1 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|452211813|ref|YP_007491927.1| - 0.12 11.8 0.0 0.91 8.9 0.0 2.2 2 1 1 3 3 3 0 DEAD/DEAH box helicase Phage_holin_6 PF10746.4 gi|452211814|ref|YP_007491928.1| - 0.3 10.8 2.1 0.94 9.2 1.5 1.8 1 0 0 1 1 1 0 Phage holin family 6 Zn_protease PF05618.6 gi|452211815|ref|YP_007491929.1| - 4.6e-20 71.7 0.0 1.3e-19 70.2 0.0 1.6 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.16 gi|452211815|ref|YP_007491929.1| - 0.0011 18.3 0.1 0.059 12.7 0.1 2.1 1 1 0 1 1 1 1 Polypeptide deformylase Abhydrolase_5 PF12695.2 gi|452211816|ref|YP_007491930.1| - 1.3e-14 54.1 0.0 1.7e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|452211816|ref|YP_007491930.1| - 7.6e-14 52.1 0.0 1.2e-13 51.4 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|452211816|ref|YP_007491930.1| - 0.0046 16.5 0.0 0.18 11.3 0.0 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.8 gi|452211816|ref|YP_007491930.1| - 0.013 14.9 0.0 0.019 14.4 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Nitroreductase PF00881.19 gi|452211817|ref|YP_007491931.1| - 3.6e-27 95.2 0.0 5.1e-27 94.7 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.22 gi|452211817|ref|YP_007491931.1| - 1.5e-11 43.3 12.3 2e-07 30.3 2.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211817|ref|YP_007491931.1| - 4e-10 39.9 9.7 8.3e-10 38.8 6.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|452211817|ref|YP_007491931.1| - 5.9e-09 36.0 7.8 1.1e-08 35.1 5.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211817|ref|YP_007491931.1| - 6.9e-08 32.0 12.4 5.7e-06 25.9 2.3 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|452211817|ref|YP_007491931.1| - 8.7e-08 31.8 11.0 1.2e-07 31.4 6.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|452211817|ref|YP_007491931.1| - 9.6e-07 29.4 7.3 0.0021 18.7 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|452211817|ref|YP_007491931.1| - 2.5e-06 27.0 14.7 2.8e-05 23.7 2.0 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|452211817|ref|YP_007491931.1| - 0.00013 21.8 12.7 0.00013 21.8 8.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|452211817|ref|YP_007491931.1| - 0.00018 21.7 12.9 0.016 15.5 8.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211817|ref|YP_007491931.1| - 0.00038 20.2 11.0 0.00085 19.1 7.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211817|ref|YP_007491931.1| - 0.0011 19.1 14.4 0.011 16.0 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|452211817|ref|YP_007491931.1| - 0.002 18.5 11.0 0.11 12.9 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|452211817|ref|YP_007491931.1| - 0.0082 16.6 1.8 0.0082 16.6 1.2 2.4 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|452211817|ref|YP_007491931.1| - 0.0082 16.5 11.0 0.017 15.4 1.3 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|452211817|ref|YP_007491931.1| - 0.06 13.9 5.2 0.06 13.9 3.6 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain DUF4066 PF13278.1 gi|452211818|ref|YP_007491932.1| - 5.8e-40 136.2 0.0 6.7e-40 136.0 0.0 1.0 1 0 0 1 1 1 1 Putative amidotransferase DJ-1_PfpI PF01965.19 gi|452211818|ref|YP_007491932.1| - 1.6e-20 73.0 0.0 2.2e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF3248 PF11609.3 gi|452211818|ref|YP_007491932.1| - 0.069 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3248) FERM_C PF09380.5 gi|452211818|ref|YP_007491932.1| - 0.077 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 FERM C-terminal PH-like domain UL40 PF10682.4 gi|452211818|ref|YP_007491932.1| - 0.12 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Acetyltransf_9 PF13527.1 gi|452211820|ref|YP_007491934.1| - 1.3e-11 44.4 0.0 1.9e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|452211820|ref|YP_007491934.1| - 2.2e-09 37.1 0.0 4e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|452211820|ref|YP_007491934.1| - 1.4e-06 28.3 0.1 2.5e-06 27.5 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|452211820|ref|YP_007491934.1| - 0.00021 21.4 0.0 0.00032 20.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|452211820|ref|YP_007491934.1| - 0.032 14.1 0.0 0.06 13.2 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase HNH PF01844.18 gi|452211821|ref|YP_007491935.1| - 1e-13 50.8 1.5 1e-13 50.8 1.1 1.7 2 0 0 2 2 2 1 HNH endonuclease ZF-HD_dimer PF04770.7 gi|452211821|ref|YP_007491935.1| - 0.13 12.3 5.8 0.65 10.0 4.0 1.9 1 1 0 1 1 1 0 ZF-HD protein dimerisation region AzlD PF05437.7 gi|452211822|ref|YP_007491936.1| - 0.00077 19.3 7.7 0.0014 18.5 5.3 1.4 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) 7TMR-DISM_7TM PF07695.6 gi|452211822|ref|YP_007491936.1| - 0.065 12.8 11.4 0.083 12.5 7.9 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF1614 PF07758.6 gi|452211822|ref|YP_007491936.1| - 0.21 11.2 4.7 0.26 10.9 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) DUF2892 PF11127.3 gi|452211822|ref|YP_007491936.1| - 0.22 11.3 5.0 0.086 12.6 1.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF4191 PF13829.1 gi|452211822|ref|YP_007491936.1| - 0.53 9.3 5.6 0.62 9.1 3.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF2919 PF11143.3 gi|452211822|ref|YP_007491936.1| - 1.8 8.3 13.3 3.7 7.3 9.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2919) VIT1 PF01988.14 gi|452211822|ref|YP_007491936.1| - 2.5 7.5 9.8 3.8 6.9 6.8 1.2 1 0 0 1 1 1 0 VIT family DUF1129 PF06570.6 gi|452211822|ref|YP_007491936.1| - 3 7.0 9.6 0.58 9.4 4.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3754 PF12576.3 gi|452211822|ref|YP_007491936.1| - 4.1 7.0 6.0 2.1 7.9 2.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3754) PRAI PF00697.17 gi|452211823|ref|YP_007491937.1| - 5.3e-31 107.7 0.0 6.5e-31 107.4 0.0 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RimK PF08443.6 gi|452211823|ref|YP_007491937.1| - 0.056 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATP-grasp domain TMP-TENI PF02581.12 gi|452211823|ref|YP_007491937.1| - 0.065 12.3 0.1 0.29 10.2 0.0 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI DUF3661 PF12400.3 gi|452211825|ref|YP_007491939.1| - 0.07 13.2 0.4 0.092 12.8 0.2 1.1 1 0 0 1 1 1 0 Vaculolar membrane protein NUDIX PF00293.23 gi|452211827|ref|YP_007491941.1| - 3.2e-13 49.4 0.0 4.6e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain NosD PF05048.8 gi|452211828|ref|YP_007491942.1| - 9.6e-125 414.4 129.8 1.2e-54 185.0 11.6 6.3 1 1 5 6 6 6 6 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|452211828|ref|YP_007491942.1| - 2.5e-76 254.8 183.7 2e-20 73.1 21.3 8.9 2 1 6 8 8 8 7 Right handed beta helix region FOP_dimer PF09398.5 gi|452211829|ref|YP_007491943.1| - 0.19 11.7 2.3 0.22 11.5 1.6 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain MFS_1 PF07690.11 gi|452211830|ref|YP_007491944.1| - 1.3e-22 79.9 43.2 4.3e-21 75.0 26.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily BPD_transp_1 PF00528.17 gi|452211831|ref|YP_007491945.1| - 9.1e-34 116.5 4.3 9.1e-34 116.5 3.0 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|452211831|ref|YP_007491945.1| - 7.3e-08 31.6 0.0 3e-07 29.7 0.0 2.1 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C ABC2_membrane_4 PF12730.2 gi|452211831|ref|YP_007491945.1| - 0.23 10.6 14.8 2.1 7.4 3.9 3.1 3 0 0 3 3 3 0 ABC-2 family transporter protein BPD_transp_1 PF00528.17 gi|452211832|ref|YP_007491946.1| - 4.6e-49 166.4 10.3 4.6e-49 166.4 7.2 1.6 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.9 gi|452211832|ref|YP_007491946.1| - 7 7.0 8.9 4.6 7.6 0.4 3.3 3 0 0 3 3 3 0 Renin receptor-like protein SBP_bac_5 PF00496.17 gi|452211833|ref|YP_007491947.1| - 1.7e-84 283.8 3.9 2.3e-84 283.3 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.22 gi|452211834|ref|YP_007491948.1| - 1.2e-31 109.8 0.0 3e-31 108.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|452211834|ref|YP_007491948.1| - 1.2e-11 45.1 0.4 3.2e-07 30.5 0.0 2.3 1 1 0 2 2 2 2 AAA domain oligo_HPY PF08352.7 gi|452211834|ref|YP_007491948.1| - 8.5e-08 32.4 2.6 8.5e-07 29.2 1.8 2.3 1 1 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.14 gi|452211834|ref|YP_007491948.1| - 8.7e-08 31.6 0.0 1.5e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|452211834|ref|YP_007491948.1| - 1.8e-05 24.9 0.5 0.00013 22.1 0.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|452211834|ref|YP_007491948.1| - 7.4e-05 22.1 0.0 0.00017 21.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|452211834|ref|YP_007491948.1| - 0.0011 19.0 0.2 0.0023 17.9 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|452211834|ref|YP_007491948.1| - 0.012 14.7 0.2 0.15 11.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.1 gi|452211834|ref|YP_007491948.1| - 0.039 13.3 0.9 0.6 9.4 0.0 2.7 3 0 0 3 3 3 0 AAA domain DUF258 PF03193.11 gi|452211834|ref|YP_007491948.1| - 0.043 12.9 0.1 0.13 11.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function, DUF258 KaiC PF06745.8 gi|452211834|ref|YP_007491948.1| - 0.049 12.7 0.3 0.16 11.0 0.1 1.8 2 0 0 2 2 2 0 KaiC ATP-synt_ab PF00006.20 gi|452211834|ref|YP_007491948.1| - 0.053 13.0 0.0 0.053 13.0 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain T2SE PF00437.15 gi|452211834|ref|YP_007491948.1| - 0.12 11.2 0.1 0.73 8.6 0.1 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_10 PF12846.2 gi|452211834|ref|YP_007491948.1| - 0.14 11.5 0.5 0.43 9.9 0.1 1.8 1 1 1 2 2 2 0 AAA-like domain DUF3987 PF13148.1 gi|452211834|ref|YP_007491948.1| - 0.16 10.4 0.0 0.27 9.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ABC_tran PF00005.22 gi|452211835|ref|YP_007491949.1| - 8.4e-25 87.6 0.0 1.2e-24 87.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|452211835|ref|YP_007491949.1| - 2.6e-13 50.1 0.4 5.2e-13 49.1 0.3 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|452211835|ref|YP_007491949.1| - 1.2e-08 35.2 0.1 2.7e-06 27.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|452211835|ref|YP_007491949.1| - 0.00075 18.7 0.1 0.0021 17.3 0.1 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|452211835|ref|YP_007491949.1| - 0.018 14.1 0.1 0.18 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.20 gi|452211835|ref|YP_007491949.1| - 0.12 11.8 0.0 0.14 11.6 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain SDF PF00375.13 gi|452211837|ref|YP_007491951.1| - 4.7e-118 394.3 45.0 5.4e-118 394.1 31.2 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family AFOR_C PF01314.13 gi|452211838|ref|YP_007491952.1| - 2.3e-70 237.2 0.1 3.1e-70 236.8 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|452211838|ref|YP_007491952.1| - 5.2e-52 176.1 0.0 1.2e-51 174.9 0.0 1.5 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer4 PF00037.22 gi|452211839|ref|YP_007491953.1| - 6e-13 47.7 33.7 0.00011 21.6 2.0 5.1 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.2 gi|452211839|ref|YP_007491953.1| - 1.5e-12 47.6 25.4 9.7e-06 25.8 7.7 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|452211839|ref|YP_007491953.1| - 1.9e-11 43.3 35.9 2.8e-05 23.7 1.7 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.1 gi|452211839|ref|YP_007491953.1| - 1.1e-09 38.3 27.5 3.4e-05 24.0 8.9 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|452211839|ref|YP_007491953.1| - 3.3e-09 36.4 26.0 0.00024 20.8 6.0 3.2 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|452211839|ref|YP_007491953.1| - 4.5e-09 36.0 12.5 4.5e-09 36.0 8.7 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|452211839|ref|YP_007491953.1| - 8e-09 35.1 28.2 0.0049 16.6 9.1 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|452211839|ref|YP_007491953.1| - 1.1e-08 34.4 35.7 0.00039 20.1 1.8 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.1 gi|452211839|ref|YP_007491953.1| - 7.8e-08 32.9 25.3 0.0026 18.4 0.5 4.5 2 2 3 5 5 5 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|452211839|ref|YP_007491953.1| - 1.5e-06 28.1 25.0 0.01 15.8 4.9 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|452211839|ref|YP_007491953.1| - 7.2e-06 25.9 32.8 0.0017 18.5 0.7 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.1 gi|452211839|ref|YP_007491953.1| - 9.3e-05 22.6 27.9 0.091 13.1 0.4 3.9 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|452211839|ref|YP_007491953.1| - 0.00046 20.5 47.9 0.017 15.6 4.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_15 PF13459.1 gi|452211839|ref|YP_007491953.1| - 0.13 12.8 27.6 0.18 12.4 1.8 3.9 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|452211839|ref|YP_007491953.1| - 2.2 8.7 36.3 0.47 10.9 2.3 4.2 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|452211839|ref|YP_007491953.1| - 5.6 7.4 24.0 1.7 9.1 0.2 3.7 4 0 0 4 4 3 0 4Fe-4S single cluster domain C1q PF00386.16 gi|452211840|ref|YP_007491954.1| - 0.1 12.5 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 C1q domain GATase PF00117.23 gi|452211841|ref|YP_007491955.1| - 2.4e-16 59.7 0.0 4.3e-16 58.9 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|452211841|ref|YP_007491955.1| - 0.0014 18.1 0.0 0.0023 17.5 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|452211841|ref|YP_007491955.1| - 0.0018 17.7 0.0 0.0042 16.5 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 HAD_2 PF13419.1 gi|452211842|ref|YP_007491956.1| - 2.5e-22 79.9 0.0 2.9e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|452211842|ref|YP_007491956.1| - 2.3e-09 38.0 0.1 2.2e-08 34.8 0.0 1.9 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|452211842|ref|YP_007491956.1| - 1.1e-08 34.6 0.0 2.3e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|452211842|ref|YP_007491956.1| - 0.00022 21.4 0.1 0.00034 20.8 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase TPR_2 PF07719.12 gi|452211843|ref|YP_007491957.1| - 1.3e-44 146.5 10.3 1.7e-09 36.8 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_1 PF00515.23 gi|452211843|ref|YP_007491957.1| - 4.2e-42 140.0 12.6 3.3e-10 39.1 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211843|ref|YP_007491957.1| - 2.2e-39 132.9 11.0 7.3e-17 60.7 0.2 4.3 3 1 0 4 4 4 4 TPR repeat TPR_16 PF13432.1 gi|452211843|ref|YP_007491957.1| - 3e-36 123.3 6.4 3.4e-12 46.6 0.0 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211843|ref|YP_007491957.1| - 6.6e-30 100.7 7.0 4e-07 29.7 0.0 7.0 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211843|ref|YP_007491957.1| - 2.2e-28 95.8 6.2 7e-07 28.5 0.1 6.6 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211843|ref|YP_007491957.1| - 3e-25 86.4 1.1 0.00012 22.3 0.1 6.2 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211843|ref|YP_007491957.1| - 7.9e-24 83.3 0.0 4e-05 23.3 0.0 5.2 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211843|ref|YP_007491957.1| - 1.9e-23 82.2 5.6 1.8e-11 43.7 0.1 5.2 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211843|ref|YP_007491957.1| - 2.3e-22 79.1 3.1 2.4e-08 34.1 0.0 4.2 3 1 1 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211843|ref|YP_007491957.1| - 8.3e-20 70.7 3.1 5e-08 32.9 0.0 4.3 2 2 3 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|452211843|ref|YP_007491957.1| - 1.9e-18 65.5 4.5 0.02 15.3 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452211843|ref|YP_007491957.1| - 1.5e-13 50.3 5.7 0.014 15.2 0.0 6.1 6 0 0 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.3 gi|452211843|ref|YP_007491957.1| - 1.1e-10 40.9 0.6 0.0014 17.4 0.0 3.9 2 1 0 4 4 4 3 NMDA receptor-regulated protein 1 TPR_7 PF13176.1 gi|452211843|ref|YP_007491957.1| - 1.3e-10 40.2 5.5 0.12 12.2 0.0 6.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211843|ref|YP_007491957.1| - 9.4e-09 34.9 8.1 1.5 8.8 0.1 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat Apc5 PF12862.2 gi|452211843|ref|YP_007491957.1| - 3.2e-07 30.0 1.1 0.2 11.5 0.0 4.8 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 5 DUF3856 PF12968.2 gi|452211843|ref|YP_007491957.1| - 5.2e-07 29.5 2.8 0.92 9.3 0.0 5.7 3 2 3 6 6 6 2 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|452211843|ref|YP_007491957.1| - 5.6e-07 28.9 0.7 0.00017 20.7 0.0 3.9 1 1 2 4 4 4 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|452211843|ref|YP_007491957.1| - 8.7e-07 28.6 6.9 0.15 11.8 0.0 5.6 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|452211843|ref|YP_007491957.1| - 1.9e-06 27.9 0.5 0.13 12.3 0.0 4.3 3 1 2 5 5 5 3 Tetratricopeptide repeat DUF3829 PF12889.2 gi|452211843|ref|YP_007491957.1| - 7.6e-06 25.3 1.6 1.5e-05 24.3 1.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) BTAD PF03704.12 gi|452211843|ref|YP_007491957.1| - 2e-05 24.9 0.3 0.0094 16.2 0.0 3.4 2 2 1 3 3 3 2 Bacterial transcriptional activator domain Coatomer_E PF04733.9 gi|452211843|ref|YP_007491957.1| - 4.8e-05 22.7 1.0 0.45 9.6 0.0 4.0 3 1 0 4 4 4 2 Coatomer epsilon subunit PPR PF01535.15 gi|452211843|ref|YP_007491957.1| - 0.0002 21.1 2.7 3.8 7.7 0.0 5.2 5 0 0 5 5 5 1 PPR repeat TPR_5 PF12688.2 gi|452211843|ref|YP_007491957.1| - 0.00026 21.0 0.1 1.6 8.8 0.0 3.5 2 2 1 3 3 3 1 Tetratrico peptide repeat SHNi-TPR PF10516.4 gi|452211843|ref|YP_007491957.1| - 0.00047 19.3 1.5 0.76 9.0 0.0 4.0 4 0 0 4 4 4 1 SHNi-TPR TPR_4 PF07721.9 gi|452211843|ref|YP_007491957.1| - 0.0008 19.6 0.0 29 5.4 0.0 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat ChAPs PF09295.5 gi|452211843|ref|YP_007491957.1| - 0.0016 17.2 0.0 0.0029 16.4 0.0 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_21 PF09976.4 gi|452211843|ref|YP_007491957.1| - 0.01 15.7 0.2 9.7 6.1 0.0 3.7 4 1 0 4 4 3 0 Tetratricopeptide repeat YfiO PF13525.1 gi|452211843|ref|YP_007491957.1| - 0.014 14.9 0.1 4.6 6.6 0.0 2.9 2 1 0 2 2 2 0 Outer membrane lipoprotein Alkyl_sulf_dimr PF14863.1 gi|452211843|ref|YP_007491957.1| - 0.1 12.8 0.2 23 5.1 0.0 3.1 3 0 0 3 3 3 0 Alkyl sulfatase dimerisation NAD_binding_8 PF13450.1 gi|452211844|ref|YP_007491958.1| - 9.9e-19 67.1 0.1 2e-18 66.1 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.19 gi|452211844|ref|YP_007491958.1| - 2.3e-15 56.6 0.0 3.9e-14 52.5 0.0 2.3 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.19 gi|452211844|ref|YP_007491958.1| - 3.2e-11 42.7 0.5 1.6e-09 37.1 0.6 2.5 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.19 gi|452211844|ref|YP_007491958.1| - 4.2e-10 39.0 0.5 2.2e-07 30.1 0.6 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|452211844|ref|YP_007491958.1| - 6.7e-09 35.3 0.1 1.3e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|452211844|ref|YP_007491958.1| - 6.7e-08 31.4 0.7 2.8e-07 29.3 0.1 2.2 2 1 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|452211844|ref|YP_007491958.1| - 9.6e-07 28.1 0.6 2.2e-06 26.9 0.2 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.14 gi|452211844|ref|YP_007491958.1| - 2.2e-06 27.0 0.3 3.6e-06 26.2 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain GDI PF00996.13 gi|452211844|ref|YP_007491958.1| - 1e-05 24.0 0.5 2.1e-05 23.0 0.3 1.5 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox PF00070.22 gi|452211844|ref|YP_007491958.1| - 5.5e-05 23.4 1.9 7.3e-05 23.0 0.2 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|452211844|ref|YP_007491958.1| - 0.00018 20.5 0.5 0.00049 19.0 0.3 1.7 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.9 gi|452211844|ref|YP_007491958.1| - 0.00032 20.6 0.0 0.00069 19.5 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|452211844|ref|YP_007491958.1| - 0.00052 20.1 0.2 0.00095 19.2 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|452211844|ref|YP_007491958.1| - 0.0024 16.8 0.2 0.0036 16.2 0.1 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Trp_halogenase PF04820.9 gi|452211844|ref|YP_007491958.1| - 0.19 10.3 0.2 0.31 9.6 0.1 1.3 1 0 0 1 1 1 0 Tryptophan halogenase Rieske PF00355.21 gi|452211845|ref|YP_007491959.1| - 7e-18 64.0 0.0 8.2e-18 63.7 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|452211845|ref|YP_007491959.1| - 3.3e-10 39.6 0.0 3.9e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF3491 PF11996.3 gi|452211845|ref|YP_007491959.1| - 0.15 9.5 0.0 0.17 9.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3491) B12-binding_2 PF02607.12 gi|452211847|ref|YP_007491961.1| - 4.3e-20 71.5 0.0 1e-19 70.3 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|452211847|ref|YP_007491961.1| - 5.3e-17 61.8 0.2 8.2e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain Rep_fac_C PF08542.6 gi|452211847|ref|YP_007491961.1| - 0.048 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Replication factor C C-terminal domain RsbU_N PF08673.5 gi|452211847|ref|YP_007491961.1| - 0.048 13.6 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain MtmB PF05369.7 gi|452211848|ref|YP_007491962.1| - 6.8e-143 476.1 0.9 7.6e-143 475.9 0.6 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB DUF2769 PF10967.3 gi|452211849|ref|YP_007491963.1| - 2e-19 69.6 9.1 3e-19 69.0 6.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) Cys_rich_CWC PF14375.1 gi|452211849|ref|YP_007491963.1| - 0.087 12.7 6.9 0.69 9.8 0.4 2.3 2 0 0 2 2 2 0 Cysteine-rich CWC zf-Paramyx-P PF13008.2 gi|452211849|ref|YP_007491963.1| - 0.09 11.9 6.2 1.7 7.9 0.7 2.4 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein DUF3317 PF11779.3 gi|452211851|ref|YP_007491965.1| - 0.036 13.5 0.0 0.064 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3317) HupE_UreJ PF04955.7 gi|452211851|ref|YP_007491965.1| - 0.16 11.2 1.5 0.29 10.3 1.0 1.5 1 1 0 1 1 1 0 HupE / UreJ protein TPR_1 PF00515.23 gi|452211856|ref|YP_007491970.1| - 5.1e-48 158.7 14.6 6.1e-08 31.9 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.1 gi|452211856|ref|YP_007491970.1| - 3.3e-47 158.0 15.4 1.2e-14 53.7 0.1 4.4 4 0 0 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|452211856|ref|YP_007491970.1| - 1.5e-41 136.9 16.2 4.5e-07 29.2 0.2 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|452211856|ref|YP_007491970.1| - 2.7e-39 130.1 11.5 4.3e-05 23.3 0.0 8.3 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|452211856|ref|YP_007491970.1| - 3.9e-32 110.2 10.4 8.8e-11 42.1 0.6 5.2 3 2 2 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|452211856|ref|YP_007491970.1| - 3.8e-29 100.4 13.4 7.2e-08 32.2 0.0 4.8 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|452211856|ref|YP_007491970.1| - 1.2e-27 93.8 14.3 2.4e-05 24.5 0.6 8.3 1 1 7 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|452211856|ref|YP_007491970.1| - 3.7e-26 88.9 11.5 1.1e-06 27.9 0.1 8.2 7 1 1 8 8 8 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|452211856|ref|YP_007491970.1| - 1.8e-20 72.5 7.9 2.8e-06 27.1 0.1 4.6 2 1 4 6 6 5 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|452211856|ref|YP_007491970.1| - 8.7e-19 67.6 13.6 1e-05 25.7 0.1 5.3 2 2 3 6 6 6 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|452211856|ref|YP_007491970.1| - 8.3e-17 61.1 2.0 9.7e-06 25.6 0.4 3.4 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|452211856|ref|YP_007491970.1| - 6.5e-13 47.4 4.6 0.001 18.6 0.1 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|452211856|ref|YP_007491970.1| - 3.3e-09 36.4 9.3 0.7 9.8 0.0 6.2 6 1 1 7 7 6 4 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|452211856|ref|YP_007491970.1| - 3.7e-08 33.3 6.6 6.9 7.3 0.0 7.8 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_15 PF13429.1 gi|452211856|ref|YP_007491970.1| - 7.6e-08 31.7 10.5 2.4e-05 23.5 1.7 3.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|452211856|ref|YP_007491970.1| - 2.6e-07 30.3 6.6 0.15 12.0 0.3 5.4 5 1 1 6 6 5 2 Tetratricopeptide repeat BTAD PF03704.12 gi|452211856|ref|YP_007491970.1| - 2.6e-06 27.7 2.4 0.15 12.3 0.3 3.6 1 1 2 3 3 3 2 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|452211856|ref|YP_007491970.1| - 8.8e-06 25.7 6.0 0.94 9.6 0.4 5.0 2 2 3 5 5 5 2 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|452211856|ref|YP_007491970.1| - 0.00075 19.2 0.1 0.22 11.3 0.0 3.6 3 1 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region MIT PF04212.13 gi|452211856|ref|YP_007491970.1| - 0.0051 16.6 1.7 3.8 7.4 0.2 4.6 4 0 0 4 4 4 1 MIT (microtubule interacting and transport) domain Apc5 PF12862.2 gi|452211856|ref|YP_007491970.1| - 0.0084 15.9 0.4 15 5.5 0.0 3.7 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 DUF3856 PF12968.2 gi|452211856|ref|YP_007491970.1| - 0.0094 15.7 13.2 0.82 9.4 0.4 6.1 2 1 1 4 4 3 1 Domain of Unknown Function (DUF3856) Coatomer_E PF04733.9 gi|452211856|ref|YP_007491970.1| - 0.039 13.1 0.1 2.9 7.0 0.0 2.6 2 1 0 2 2 2 0 Coatomer epsilon subunit FAT PF02259.18 gi|452211856|ref|YP_007491970.1| - 0.046 12.7 1.7 0.25 10.2 0.6 2.6 2 1 0 2 2 2 0 FAT domain NARP1 PF12569.3 gi|452211856|ref|YP_007491970.1| - 0.17 10.6 27.8 0.45 9.2 0.1 5.3 1 1 6 7 7 6 0 NMDA receptor-regulated protein 1 TPR_4 PF07721.9 gi|452211856|ref|YP_007491970.1| - 0.21 12.0 1.4 38 5.1 0.4 4.2 5 0 0 5 5 3 0 Tetratricopeptide repeat HTH_29 PF13551.1 gi|452211857|ref|YP_007491971.1| - 4.9e-25 87.8 0.1 1.9e-24 85.9 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|452211857|ref|YP_007491971.1| - 1.2e-10 42.0 0.1 5.8e-09 36.6 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|452211857|ref|YP_007491971.1| - 9.4e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|452211857|ref|YP_007491971.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|452211857|ref|YP_007491971.1| - 0.041 13.9 0.0 1.8 8.6 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|452211857|ref|YP_007491971.1| - 0.05 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|452211857|ref|YP_007491971.1| - 0.14 11.9 0.8 0.54 9.9 0.2 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB PRA1 PF03208.14 gi|452211859|ref|YP_007491973.1| - 0.12 11.6 1.2 0.19 11.0 0.8 1.5 1 1 0 1 1 1 0 PRA1 family protein Neurensin PF14927.1 gi|452211859|ref|YP_007491973.1| - 2 7.8 4.8 3 7.2 0.1 2.1 1 1 1 2 2 2 0 Neurensin PepSY_TM PF03929.11 gi|452211859|ref|YP_007491973.1| - 5.7 7.5 8.6 1 9.9 2.2 2.1 2 0 0 2 2 2 0 PepSY-associated TM helix UbiA PF01040.13 gi|452211860|ref|YP_007491974.1| - 0.0036 16.5 0.0 0.0036 16.5 0.0 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family Reticulon PF02453.12 gi|452211860|ref|YP_007491974.1| - 1 8.9 6.2 1.3 8.6 4.3 1.1 1 0 0 1 1 1 0 Reticulon PRiA4_ORF3 PF07929.6 gi|452211866|ref|YP_007491980.1| - 2.6e-70 235.4 0.2 2.9e-70 235.3 0.2 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein CBM_10 PF02013.11 gi|452211866|ref|YP_007491980.1| - 0.054 13.7 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Cellulose or protein binding domain DUF3164 PF11363.3 gi|452211867|ref|YP_007491981.1| - 0.031 13.6 0.2 0.063 12.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) Sigma_1_2 PF03084.9 gi|452211867|ref|YP_007491981.1| - 0.12 10.9 0.3 0.17 10.5 0.2 1.1 1 0 0 1 1 1 0 Reoviral Sigma1/Sigma2 family TPR_6 PF13174.1 gi|452211867|ref|YP_007491981.1| - 0.12 12.8 0.7 5.6 7.6 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat GIIM PF08388.6 gi|452211869|ref|YP_007491983.1| - 0.0036 17.0 0.0 0.0037 17.0 0.0 1.1 1 0 0 1 1 1 1 Group II intron, maturase-specific domain YoaP PF14268.1 gi|452211871|ref|YP_007491985.1| - 7e-16 57.1 0.0 1.3e-15 56.2 0.0 1.5 1 0 0 1 1 1 1 YoaP-like Acetyltransf_1 PF00583.19 gi|452211871|ref|YP_007491985.1| - 3e-06 27.1 0.0 5.8e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.1 gi|452211871|ref|YP_007491985.1| - 0.00013 21.7 0.0 0.00036 20.3 0.0 1.8 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.1 gi|452211871|ref|YP_007491985.1| - 0.018 15.1 0.2 0.036 14.2 0.1 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain