# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SBP_bac_5 PF00496.17 gi|21226103|ref|NP_632025.1| - 2.3e-80 270.2 7.9 3.4e-80 269.6 5.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle SBP_bac_5 PF00496.17 gi|21226104|ref|NP_632026.1| - 8.4e-73 245.3 8.5 1.1e-72 244.9 5.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4329 PF14220.1 gi|21226104|ref|NP_632026.1| - 0.04 13.8 0.0 0.1 12.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4329) 3Beta_HSD PF01073.14 gi|21226105|ref|NP_632027.1| - 0.021 13.5 0.0 0.026 13.2 0.0 1.0 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family BPD_transp_1 PF00528.17 gi|21226106|ref|NP_632028.1| - 1.9e-40 138.3 10.5 3.5e-40 137.5 7.3 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|21226107|ref|NP_632029.1| - 3.7e-22 78.7 10.9 3.7e-22 78.7 7.6 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1719 PF08224.6 gi|21226107|ref|NP_632029.1| - 0.17 10.9 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) SUR7 PF06687.7 gi|21226107|ref|NP_632029.1| - 6.4 6.2 8.3 5.3 6.5 4.5 2.1 1 1 0 1 1 1 0 SUR7/PalI family DUF2244 PF10003.4 gi|21226107|ref|NP_632029.1| - 8.8 5.7 12.5 0.75 9.1 1.0 2.9 3 1 0 3 3 3 0 Integral membrane protein (DUF2244) ABC_tran PF00005.22 gi|21226108|ref|NP_632030.1| - 4e-22 78.9 0.0 5.9e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|21226108|ref|NP_632030.1| - 2.5e-11 43.7 0.0 4.9e-11 42.8 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|21226108|ref|NP_632030.1| - 8.2e-06 25.9 0.0 0.005 16.8 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|21226108|ref|NP_632030.1| - 2.3e-05 24.5 0.0 5.5e-05 23.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21226108|ref|NP_632030.1| - 0.0003 20.0 0.3 0.28 10.3 0.1 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.16 gi|21226108|ref|NP_632030.1| - 0.0006 19.0 0.2 0.0016 17.6 0.1 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|21226108|ref|NP_632030.1| - 0.0012 18.8 0.0 0.0019 18.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|21226108|ref|NP_632030.1| - 0.0012 18.3 0.1 0.0024 17.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|21226108|ref|NP_632030.1| - 0.006 16.3 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_33 PF13671.1 gi|21226108|ref|NP_632030.1| - 0.015 15.2 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|21226108|ref|NP_632030.1| - 0.05 13.0 0.3 0.99 8.7 0.2 2.2 1 1 1 2 2 2 0 AAA-like domain AAA_25 PF13481.1 gi|21226108|ref|NP_632030.1| - 0.051 12.9 0.3 0.61 9.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain DUF258 PF03193.11 gi|21226108|ref|NP_632030.1| - 0.078 12.1 0.0 0.19 10.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function, DUF258 IstB_IS21 PF01695.12 gi|21226108|ref|NP_632030.1| - 0.1 12.0 0.0 0.2 11.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein NB-ARC PF00931.17 gi|21226108|ref|NP_632030.1| - 0.13 11.0 0.1 0.29 9.9 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain ABC_tran PF00005.22 gi|21226109|ref|NP_632031.1| - 2.3e-25 89.4 0.0 3.2e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226109|ref|NP_632031.1| - 2.5e-07 30.9 0.5 0.0026 17.7 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|21226109|ref|NP_632031.1| - 1.4e-06 28.4 0.1 2.4e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21226109|ref|NP_632031.1| - 6.6e-05 22.2 0.7 0.0038 16.4 0.0 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|21226109|ref|NP_632031.1| - 0.00054 19.1 0.2 0.00094 18.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|21226109|ref|NP_632031.1| - 0.00055 20.7 0.1 0.00073 20.3 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21226109|ref|NP_632031.1| - 0.0017 18.6 0.1 0.0043 17.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|21226109|ref|NP_632031.1| - 0.0028 17.3 0.7 0.0088 15.7 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.1 gi|21226109|ref|NP_632031.1| - 0.0032 16.9 0.2 0.0032 16.9 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain NTPase_1 PF03266.10 gi|21226109|ref|NP_632031.1| - 0.0051 16.5 0.7 1.1 8.9 0.1 2.1 2 0 0 2 2 2 1 NTPase AAA_25 PF13481.1 gi|21226109|ref|NP_632031.1| - 0.0096 15.3 0.1 0.1 11.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain UPF0079 PF02367.12 gi|21226109|ref|NP_632031.1| - 0.012 15.2 0.1 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 PduV-EutP PF10662.4 gi|21226109|ref|NP_632031.1| - 0.013 14.9 0.5 0.027 13.9 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.1 gi|21226109|ref|NP_632031.1| - 0.019 14.9 0.1 0.034 14.1 0.1 1.4 1 0 0 1 1 1 0 AAA ATPase domain Miro PF08477.8 gi|21226109|ref|NP_632031.1| - 0.028 14.9 0.0 0.059 13.8 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein AAA_10 PF12846.2 gi|21226109|ref|NP_632031.1| - 0.036 13.5 0.6 0.31 10.4 0.1 2.0 2 0 0 2 2 2 0 AAA-like domain AAA_23 PF13476.1 gi|21226109|ref|NP_632031.1| - 0.041 14.2 0.2 0.27 11.5 0.2 2.1 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|21226109|ref|NP_632031.1| - 0.048 13.6 0.6 0.13 12.2 0.4 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.24 gi|21226109|ref|NP_632031.1| - 0.056 13.6 0.3 0.14 12.3 0.2 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.1 gi|21226109|ref|NP_632031.1| - 0.062 12.3 0.4 6 5.8 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain T2SE PF00437.15 gi|21226109|ref|NP_632031.1| - 0.079 11.8 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.1 gi|21226109|ref|NP_632031.1| - 0.084 12.7 0.1 1.9 8.4 0.1 2.3 1 1 0 1 1 1 0 AAA domain CoaE PF01121.15 gi|21226109|ref|NP_632031.1| - 0.094 12.1 0.2 0.93 8.8 0.1 2.1 2 0 0 2 2 2 0 Dephospho-CoA kinase DEAD PF00270.24 gi|21226109|ref|NP_632031.1| - 0.11 11.9 0.0 1.5 8.3 0.0 2.0 2 0 0 2 2 2 0 DEAD/DEAH box helicase DUF389 PF04087.9 gi|21226110|ref|NP_632032.1| - 9.5e-38 129.2 17.8 9.5e-38 129.2 12.3 2.4 2 1 1 3 3 3 1 Domain of unknown function (DUF389) G0-G1_switch_2 PF15103.1 gi|21226110|ref|NP_632032.1| - 0.0082 16.3 0.0 0.018 15.2 0.0 1.5 1 0 0 1 1 1 1 G0/G1 switch protein 2 DUF4330 PF14221.1 gi|21226110|ref|NP_632032.1| - 0.0096 15.7 0.8 0.029 14.2 0.6 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4330) SCIMP PF15050.1 gi|21226110|ref|NP_632032.1| - 0.016 15.0 0.0 0.037 13.9 0.0 1.5 1 0 0 1 1 1 0 SCIMP protein DUF389 PF04087.9 gi|21226111|ref|NP_632033.1| - 1e-36 125.8 16.0 1e-36 125.8 11.1 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF389) DUF998 PF06197.8 gi|21226112|ref|NP_632034.1| - 0.026 13.8 1.9 0.027 13.7 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF998) DUF1699 PF08004.6 gi|21226113|ref|NP_632035.1| - 9.8e-69 228.9 0.7 1.1e-68 228.7 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21226113|ref|NP_632035.1| - 0.031 14.5 0.1 0.22 11.7 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|21226113|ref|NP_632035.1| - 0.084 12.4 0.1 12 5.6 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF1428 PF07237.6 gi|21226114|ref|NP_632036.1| - 1.2e-39 134.2 1.1 1.6e-39 133.9 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.8 gi|21226114|ref|NP_632036.1| - 0.029 14.3 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 NIPSNAP DUF658 PF04936.7 gi|21226114|ref|NP_632036.1| - 0.051 13.4 0.2 0.083 12.7 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF658) Bactofilin PF04519.8 gi|21226115|ref|NP_632037.1| - 0.014 15.4 0.1 0.024 14.6 0.1 1.5 1 0 0 1 1 1 0 Polymer-forming cytoskeletal Sox_C_TAD PF12067.3 gi|21226115|ref|NP_632037.1| - 0.11 12.6 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Sox C-terminal transactivation domain Prenyltransf PF01255.14 gi|21226116|ref|NP_632038.1| - 1.9e-19 69.6 0.0 5e-19 68.3 0.0 1.6 1 1 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Methyltransf_31 PF13847.1 gi|21226117|ref|NP_632039.1| - 6.6e-20 71.2 0.0 8.5e-20 70.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226117|ref|NP_632039.1| - 9.6e-20 70.8 0.2 1.3e-19 70.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.6 gi|21226117|ref|NP_632039.1| - 3e-18 66.0 0.0 4.3e-18 65.5 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_18 PF12847.2 gi|21226117|ref|NP_632039.1| - 2.3e-17 63.5 0.2 4e-17 62.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21226117|ref|NP_632039.1| - 2.2e-16 60.1 0.1 3e-16 59.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226117|ref|NP_632039.1| - 5.8e-15 55.4 0.2 9.6e-15 54.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226117|ref|NP_632039.1| - 2.8e-13 49.8 0.0 3.6e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21226117|ref|NP_632039.1| - 3.3e-11 43.2 0.0 4.6e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|21226117|ref|NP_632039.1| - 2e-10 40.1 0.0 2.4e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB CMAS PF02353.15 gi|21226117|ref|NP_632039.1| - 7.7e-10 38.3 0.0 8.9e-10 38.0 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|21226117|ref|NP_632039.1| - 8.9e-09 34.9 0.0 1.2e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|21226117|ref|NP_632039.1| - 1.7e-08 33.8 0.1 2.3e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.8 gi|21226117|ref|NP_632039.1| - 2.8e-05 23.4 0.0 3.7e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|21226117|ref|NP_632039.1| - 5.4e-05 22.7 0.2 0.0001 21.8 0.1 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.6 gi|21226117|ref|NP_632039.1| - 6e-05 22.5 0.0 7.7e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.12 gi|21226117|ref|NP_632039.1| - 0.00022 20.3 0.0 0.00061 18.8 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase MetW PF07021.7 gi|21226117|ref|NP_632039.1| - 0.00092 18.6 0.1 0.0012 18.2 0.1 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.14 gi|21226117|ref|NP_632039.1| - 0.0066 15.9 0.2 0.011 15.3 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Spermine_synth PF01564.12 gi|21226117|ref|NP_632039.1| - 0.0086 15.0 0.1 0.01 14.7 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_32 PF13679.1 gi|21226117|ref|NP_632039.1| - 0.0089 15.7 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain AdoMet_MTase PF07757.8 gi|21226117|ref|NP_632039.1| - 0.015 15.4 0.0 0.024 14.7 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase UPF0020 PF01170.13 gi|21226117|ref|NP_632039.1| - 0.023 14.2 0.2 0.034 13.7 0.1 1.4 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.10 gi|21226117|ref|NP_632039.1| - 0.12 11.9 0.3 0.5 9.9 0.2 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase eIF-1a PF01176.14 gi|21226118|ref|NP_632040.1| - 1.1e-12 47.1 0.9 1.3e-12 46.9 0.6 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1317 PF07026.6 gi|21226118|ref|NP_632040.1| - 0.13 12.1 0.1 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) Methyltransf_11 PF08241.7 gi|21226119|ref|NP_632041.1| - 1.7e-20 73.3 0.0 2.9e-19 69.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226119|ref|NP_632041.1| - 3.8e-19 68.7 0.0 1.6e-18 66.7 0.0 1.8 1 1 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226119|ref|NP_632041.1| - 7.1e-18 64.5 0.0 1.3e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21226119|ref|NP_632041.1| - 1.4e-14 54.3 0.0 5.1e-14 52.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226119|ref|NP_632041.1| - 5.2e-14 52.7 0.0 3.1e-13 50.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226119|ref|NP_632041.1| - 5.3e-14 52.2 0.0 8.9e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226119|ref|NP_632041.1| - 5.4e-13 49.1 0.0 1.7e-11 44.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21226119|ref|NP_632041.1| - 4.5e-08 33.1 0.0 9.7e-08 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21226119|ref|NP_632041.1| - 1e-06 28.4 0.0 1.7e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.9 gi|21226119|ref|NP_632041.1| - 5e-05 22.7 0.0 0.00016 21.1 0.0 1.8 2 1 1 3 3 3 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|21226119|ref|NP_632041.1| - 7.3e-05 21.9 0.0 0.00018 20.6 0.0 1.7 1 1 0 1 1 1 1 Putative methyltransferase CMAS PF02353.15 gi|21226119|ref|NP_632041.1| - 0.00026 20.1 0.0 0.00036 19.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.5 gi|21226119|ref|NP_632041.1| - 0.0037 16.7 0.0 0.0062 16.0 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_8 PF05148.10 gi|21226119|ref|NP_632041.1| - 0.0056 16.3 0.0 0.11 12.1 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_3 PF01596.12 gi|21226119|ref|NP_632041.1| - 0.012 14.6 0.0 0.019 14.0 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Pox_MCEL PF03291.11 gi|21226119|ref|NP_632041.1| - 0.08 11.7 0.0 1.2 7.9 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme Methyltransf_24 PF13578.1 gi|21226119|ref|NP_632041.1| - 0.093 13.5 0.0 0.19 12.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF3419 PF11899.3 gi|21226119|ref|NP_632041.1| - 0.1 11.3 0.0 0.19 10.4 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3419) PrmA PF06325.8 gi|21226119|ref|NP_632041.1| - 0.11 11.6 0.0 0.23 10.5 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF4507 PF14964.1 gi|21226120|ref|NP_632042.1| - 0.033 12.9 0.1 0.035 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) AAA_14 PF13173.1 gi|21226121|ref|NP_632043.1| - 1.8e-38 131.3 0.1 4e-38 130.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|21226121|ref|NP_632043.1| - 1.3e-10 41.2 0.1 2.1e-10 40.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) Arch_ATPase PF01637.13 gi|21226121|ref|NP_632043.1| - 3e-08 33.6 0.6 0.00017 21.3 0.0 2.4 1 1 1 2 2 2 2 Archaeal ATPase AAA_25 PF13481.1 gi|21226121|ref|NP_632043.1| - 0.0015 17.9 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21226121|ref|NP_632043.1| - 0.0021 18.8 0.5 0.011 16.5 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21226121|ref|NP_632043.1| - 0.039 14.1 0.0 1.5 8.9 0.0 2.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|21226121|ref|NP_632043.1| - 0.07 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain HEAT_2 PF13646.1 gi|21226122|ref|NP_632044.1| - 3.7e-15 55.9 0.0 0.00077 19.6 0.0 3.6 1 1 3 4 4 4 4 HEAT repeats HEAT PF02985.17 gi|21226122|ref|NP_632044.1| - 2.3e-10 39.6 0.1 0.14 12.2 0.0 5.1 5 0 0 5 5 5 3 HEAT repeat HEAT_EZ PF13513.1 gi|21226122|ref|NP_632044.1| - 2.1e-08 34.3 0.0 0.1 13.1 0.0 4.8 4 2 1 5 5 5 2 HEAT-like repeat Adaptin_N PF01602.15 gi|21226122|ref|NP_632044.1| - 2.5e-06 26.1 0.0 0.00053 18.4 0.0 3.2 1 1 1 2 2 2 1 Adaptin N terminal region ParD PF09386.5 gi|21226122|ref|NP_632044.1| - 4.7e-06 26.6 4.8 1.7 8.8 0.0 5.8 4 2 3 7 7 7 2 Antitoxin ParD Cnd1 PF12717.2 gi|21226122|ref|NP_632044.1| - 0.019 14.8 0.9 73 3.1 0.0 4.4 4 1 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 PPP1R35_C PF15503.1 gi|21226122|ref|NP_632044.1| - 0.053 13.0 0.3 1.2 8.7 0.0 2.7 1 1 2 3 3 3 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DNA_alkylation PF08713.6 gi|21226122|ref|NP_632044.1| - 0.054 12.9 3.9 0.28 10.6 0.2 2.5 1 1 1 2 2 2 0 DNA alkylation repair enzyme P4Ha_N PF08336.6 gi|21226122|ref|NP_632044.1| - 0.13 12.1 1.5 2.4 7.9 0.0 2.9 3 0 0 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Myb_DNA-bind_5 PF13873.1 gi|21226122|ref|NP_632044.1| - 0.99 9.3 16.6 31 4.5 0.0 6.2 6 2 1 8 8 8 0 Myb/SANT-like DNA-binding domain zinc_ribbon_6 PF14599.1 gi|21226123|ref|NP_632045.1| - 0.017 14.9 0.7 0.04 13.7 0.5 1.7 1 1 0 1 1 1 0 Zinc-ribbon Lar_restr_allev PF14354.1 gi|21226123|ref|NP_632045.1| - 0.12 12.6 1.1 0.42 10.9 0.9 1.8 1 1 1 2 2 2 0 Restriction alleviation protein Lar DZR PF12773.2 gi|21226123|ref|NP_632045.1| - 0.13 12.1 0.5 0.19 11.5 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon DNA_RNApol_7kD PF03604.8 gi|21226123|ref|NP_632045.1| - 0.2 11.1 1.9 0.7 9.4 1.3 1.8 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit UPF0150 PF03681.10 gi|21226124|ref|NP_632046.1| - 6.2e-20 70.5 0.3 6.2e-20 70.5 0.2 1.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|21226124|ref|NP_632046.1| - 0.0065 15.9 0.0 0.0092 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) Jag_N PF14804.1 gi|21226124|ref|NP_632046.1| - 0.39 10.7 2.2 7.4 6.6 1.5 2.3 1 1 0 1 1 1 0 Jag N-terminus YcfA PF07927.7 gi|21226125|ref|NP_632047.1| - 2e-13 50.0 0.4 2.3e-13 49.8 0.3 1.1 1 0 0 1 1 1 1 YcfA-like protein Osmo_CC PF08946.5 gi|21226126|ref|NP_632048.1| - 0.00091 19.2 3.0 0.0017 18.3 2.1 1.4 1 0 0 1 1 1 1 Osmosensory transporter coiled coil Staph_haemo PF05480.6 gi|21226126|ref|NP_632048.1| - 0.069 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Staphylococcus haemolytic protein Cir_N PF10197.4 gi|21226126|ref|NP_632048.1| - 0.073 13.1 3.0 0.21 11.6 0.8 2.2 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR GnsAB PF08178.6 gi|21226126|ref|NP_632048.1| - 0.12 11.9 0.3 0.24 11.0 0.0 1.6 2 0 0 2 2 2 0 GnsA/GnsB family CD36 PF01130.16 gi|21226127|ref|NP_632049.1| - 0.051 11.8 0.1 0.064 11.5 0.0 1.1 1 0 0 1 1 1 0 CD36 family DUF234 PF03008.9 gi|21226128|ref|NP_632050.1| - 0.04 14.0 0.0 0.079 13.0 0.0 1.6 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function HTH_5 PF01022.15 gi|21226128|ref|NP_632050.1| - 0.051 13.2 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KilA-N PF04383.8 gi|21226128|ref|NP_632050.1| - 0.096 12.3 0.2 2.1 7.9 0.2 2.4 2 1 0 2 2 2 0 KilA-N domain GYF PF02213.11 gi|21226129|ref|NP_632051.1| - 0.017 14.7 0.8 0.028 13.9 0.5 1.4 1 0 0 1 1 1 0 GYF domain Lipocalin_4 PF13648.1 gi|21226129|ref|NP_632051.1| - 0.067 13.8 0.7 0.078 13.6 0.5 1.2 1 0 0 1 1 1 0 Lipocalin-like domain B3 PF02362.16 gi|21226129|ref|NP_632051.1| - 0.067 12.8 0.1 0.087 12.4 0.1 1.3 1 0 0 1 1 1 0 B3 DNA binding domain UvrD-helicase PF00580.16 gi|21226130|ref|NP_632052.1| - 3.3e-44 151.4 12.9 3.3e-44 151.4 8.9 3.0 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|21226130|ref|NP_632052.1| - 1.8e-21 76.9 1.8 1.5e-16 60.8 0.0 4.7 3 2 1 4 4 4 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.1 gi|21226130|ref|NP_632052.1| - 7.5e-10 38.4 0.1 1.6e-09 37.3 0.1 1.6 1 0 0 1 1 1 1 Part of AAA domain UvrD_C_2 PF13538.1 gi|21226130|ref|NP_632052.1| - 3.5e-09 36.7 0.1 4.2e-08 33.2 0.0 2.9 3 1 0 3 3 3 1 UvrD-like helicase C-terminal domain AAA_30 PF13604.1 gi|21226130|ref|NP_632052.1| - 1e-06 28.5 0.1 8.8e-05 22.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain ResIII PF04851.10 gi|21226130|ref|NP_632052.1| - 0.00023 21.0 4.0 0.0025 17.6 0.7 2.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.1 gi|21226130|ref|NP_632052.1| - 0.0039 16.8 0.4 0.0039 16.8 0.3 2.3 3 1 0 3 3 3 1 AAA domain DEAD PF00270.24 gi|21226130|ref|NP_632052.1| - 0.012 15.0 0.2 0.069 12.6 0.0 2.1 2 0 0 2 2 2 0 DEAD/DEAH box helicase Mannitol_dh PF01232.18 gi|21226130|ref|NP_632052.1| - 0.02 14.8 0.7 0.11 12.4 0.0 2.5 3 0 0 3 3 3 0 Mannitol dehydrogenase Rossmann domain Viral_helicase1 PF01443.13 gi|21226130|ref|NP_632052.1| - 0.037 13.5 4.3 1.4 8.3 0.0 4.5 4 1 2 6 6 6 0 Viral (Superfamily 1) RNA helicase TPR_11 PF13414.1 gi|21226132|ref|NP_632054.1| - 1.5e-16 59.7 9.5 0.00017 21.1 0.0 4.6 4 0 0 4 4 4 3 TPR repeat TPR_2 PF07719.12 gi|21226132|ref|NP_632054.1| - 5.5e-09 35.2 17.2 0.0094 15.8 0.3 6.9 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226132|ref|NP_632054.1| - 8e-08 31.9 3.8 1.4 9.3 0.2 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226132|ref|NP_632054.1| - 1.2e-07 31.6 0.0 0.022 15.3 0.0 4.6 2 1 1 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226132|ref|NP_632054.1| - 3.8e-07 29.9 9.3 0.00037 20.3 0.6 4.6 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226132|ref|NP_632054.1| - 1e-06 29.2 0.0 1.1 9.9 0.0 4.2 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226132|ref|NP_632054.1| - 6.5e-06 25.5 18.2 0.014 15.1 0.8 5.3 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226132|ref|NP_632054.1| - 0.00014 22.1 0.4 1 9.7 0.0 3.2 2 1 0 3 3 2 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226132|ref|NP_632054.1| - 0.0004 20.6 3.2 0.055 13.9 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|21226132|ref|NP_632054.1| - 0.0019 17.4 0.1 0.0055 15.9 0.0 1.8 2 0 0 2 2 2 1 Coatomer epsilon subunit TPR_1 PF00515.23 gi|21226132|ref|NP_632054.1| - 0.0021 17.6 2.6 0.039 13.5 0.1 6.4 7 1 0 7 7 7 2 Tetratricopeptide repeat Sel1 PF08238.7 gi|21226132|ref|NP_632054.1| - 0.019 15.5 4.2 0.25 12.0 0.4 3.0 3 0 0 3 3 3 0 Sel1 repeat TPR_7 PF13176.1 gi|21226132|ref|NP_632054.1| - 0.029 14.1 0.0 1.1 9.2 0.0 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat UPF0150 PF03681.10 gi|21226133|ref|NP_632055.1| - 6.2e-20 70.5 0.3 6.2e-20 70.5 0.2 1.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|21226133|ref|NP_632055.1| - 0.0065 15.9 0.0 0.0092 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) Jag_N PF14804.1 gi|21226133|ref|NP_632055.1| - 0.39 10.7 2.2 7.4 6.6 1.5 2.3 1 1 0 1 1 1 0 Jag N-terminus YcfA PF07927.7 gi|21226134|ref|NP_632056.1| - 3.1e-14 52.6 0.3 4e-14 52.2 0.2 1.2 1 0 0 1 1 1 1 YcfA-like protein B3 PF02362.16 gi|21226135|ref|NP_632057.1| - 0.038 13.6 0.0 0.062 12.9 0.0 1.4 1 0 0 1 1 1 0 B3 DNA binding domain Lipocalin_4 PF13648.1 gi|21226135|ref|NP_632057.1| - 0.11 13.1 0.1 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 Lipocalin-like domain DnaB_2 PF07261.6 gi|21226136|ref|NP_632058.1| - 0.091 12.3 3.8 0.35 10.5 0.3 2.9 2 1 0 2 2 2 0 Replication initiation and membrane attachment PWI PF01480.12 gi|21226136|ref|NP_632058.1| - 0.19 11.8 2.3 4 7.6 0.0 3.0 3 0 0 3 3 3 0 PWI domain ABC2_membrane PF01061.19 gi|21226136|ref|NP_632058.1| - 1.1 8.3 13.6 2.3 7.3 0.4 2.2 2 0 0 2 2 2 0 ABC-2 type transporter Sdh_cyt PF01127.17 gi|21226136|ref|NP_632058.1| - 1.4 8.7 7.3 0.23 11.3 1.3 2.1 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HEAT_2 PF13646.1 gi|21226137|ref|NP_632059.1| - 4.9e-27 94.0 0.0 1.9e-05 24.8 0.0 5.8 4 1 1 5 5 5 5 HEAT repeats HEAT PF02985.17 gi|21226137|ref|NP_632059.1| - 5.8e-13 47.7 0.3 0.22 11.7 0.0 8.6 9 0 0 9 9 9 4 HEAT repeat HEAT_EZ PF13513.1 gi|21226137|ref|NP_632059.1| - 1.2e-10 41.5 1.7 0.023 15.1 0.1 6.9 7 2 1 8 8 8 3 HEAT-like repeat Arginosuc_synth PF00764.14 gi|161485685|ref|NP_632061.2| - 2.3e-181 603.0 0.1 2.6e-181 602.8 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Asn_synthase PF00733.16 gi|161485685|ref|NP_632061.2| - 8e-06 25.5 0.0 1.3e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|161485685|ref|NP_632061.2| - 0.00023 20.5 0.0 0.0022 17.3 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 gi|161485685|ref|NP_632061.2| - 0.004 16.0 0.0 0.0057 15.5 0.0 1.4 1 1 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|161485685|ref|NP_632061.2| - 0.032 12.8 0.0 0.051 12.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase CPSase_L_D2 PF02786.12 gi|21226140|ref|NP_632062.1| - 8.1e-106 352.0 0.7 1.8e-70 236.5 0.1 2.4 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|21226140|ref|NP_632062.1| - 3.1e-49 165.6 0.2 1.3e-23 83.1 0.0 3.3 3 0 0 3 3 3 2 Carbamoyl-phosphate synthase L chain, N-terminal domain CPSase_L_D3 PF02787.14 gi|21226140|ref|NP_632062.1| - 1.6e-45 153.8 0.1 4.3e-45 152.4 0.1 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp_4 PF13535.1 gi|21226140|ref|NP_632062.1| - 1.3e-36 126.0 0.1 4.4e-18 65.6 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21226140|ref|NP_632062.1| - 1.9e-25 89.3 0.0 1e-12 47.4 0.0 3.9 3 1 0 3 3 3 3 ATP-grasp in the biosynthetic pathway with Ter operon MGS PF02142.17 gi|21226140|ref|NP_632062.1| - 4.3e-22 77.8 0.3 4.8e-20 71.2 0.0 3.7 4 0 0 4 4 4 1 MGS-like domain ATP-grasp PF02222.17 gi|21226140|ref|NP_632062.1| - 1.6e-15 56.8 0.1 2.8e-07 30.0 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|21226140|ref|NP_632062.1| - 2.6e-15 56.3 0.1 2e-06 27.3 0.0 2.6 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|21226140|ref|NP_632062.1| - 3.5e-09 36.7 0.4 0.00041 20.2 0.1 2.5 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_5 PF13549.1 gi|21226140|ref|NP_632062.1| - 0.00047 19.4 0.0 0.013 14.7 0.0 2.8 2 0 0 2 2 2 1 ATP-grasp domain Hydrolase PF00702.21 gi|21226140|ref|NP_632062.1| - 0.0024 18.2 0.0 19 5.5 0.0 4.3 4 0 0 4 4 4 0 haloacid dehalogenase-like hydrolase B12-binding PF02310.14 gi|21226140|ref|NP_632062.1| - 0.0027 17.5 0.0 0.19 11.5 0.0 2.9 2 0 0 2 2 2 1 B12 binding domain Hydrolase_6 PF13344.1 gi|21226140|ref|NP_632062.1| - 0.029 14.2 0.2 2.7 7.9 0.0 4.3 4 0 0 4 4 4 0 Haloacid dehalogenase-like hydrolase HTH_19 PF12844.2 gi|21226140|ref|NP_632062.1| - 0.043 13.8 0.0 2.3 8.3 0.0 2.8 1 1 1 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|21226140|ref|NP_632062.1| - 0.048 13.7 0.1 12 6.1 0.0 3.4 3 0 0 3 3 3 0 Transcriptional regulator MerR_1 PF13411.1 gi|21226140|ref|NP_632062.1| - 0.089 12.5 0.2 3.3 7.5 0.0 3.5 3 0 0 3 3 3 0 MerR HTH family regulatory protein CPSase_sm_chain PF00988.17 gi|21226141|ref|NP_632063.1| - 1.5e-51 173.2 0.0 2.3e-51 172.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.23 gi|21226141|ref|NP_632063.1| - 5.3e-41 140.1 0.0 8.7e-41 139.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21226141|ref|NP_632063.1| - 7.7e-07 28.7 0.1 0.00024 20.6 0.0 2.3 1 1 0 1 1 1 1 Peptidase C26 Glycos_transf_N PF04413.11 gi|21226141|ref|NP_632063.1| - 0.11 11.6 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) STb_secrete PF09075.5 gi|21226141|ref|NP_632063.1| - 2.1 8.2 5.3 6 6.8 0.6 3.0 3 0 0 3 3 3 0 Heat-stable enterotoxin B, secretory ABC_tran PF00005.22 gi|21226142|ref|NP_632064.1| - 5.4e-36 123.9 0.0 1.2e-35 122.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter CBS PF00571.23 gi|21226142|ref|NP_632064.1| - 7.2e-13 48.1 0.2 1.6e-05 24.6 0.0 2.5 2 0 0 2 2 2 2 CBS domain AAA_21 PF13304.1 gi|21226142|ref|NP_632064.1| - 7.6e-10 39.2 0.4 6.6e-05 23.0 0.0 2.4 1 1 0 2 2 2 2 AAA domain ABC_ATPase PF09818.4 gi|21226142|ref|NP_632064.1| - 8.7e-06 24.5 0.2 0.035 12.6 0.0 3.1 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_29 PF13555.1 gi|21226142|ref|NP_632064.1| - 0.00028 20.3 0.0 0.00058 19.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|21226142|ref|NP_632064.1| - 0.00032 19.8 2.1 0.12 11.3 1.0 2.3 1 1 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|21226142|ref|NP_632064.1| - 0.00046 19.4 0.1 0.00083 18.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|21226142|ref|NP_632064.1| - 0.00053 20.0 0.4 0.002 18.1 0.3 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|21226142|ref|NP_632064.1| - 0.00069 19.7 2.3 0.028 14.5 0.8 3.2 2 1 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|21226142|ref|NP_632064.1| - 0.0024 18.2 0.2 0.0024 18.2 0.2 2.1 2 2 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|21226142|ref|NP_632064.1| - 0.015 14.4 0.5 0.067 12.4 0.3 1.9 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|21226142|ref|NP_632064.1| - 0.018 15.3 0.0 0.49 10.7 0.0 2.7 2 0 0 2 2 2 0 AAA domain DUF1758 PF05585.7 gi|21226142|ref|NP_632064.1| - 0.026 14.0 0.0 0.067 12.7 0.0 1.6 1 0 0 1 1 1 0 Putative peptidase (DUF1758) T2SE PF00437.15 gi|21226142|ref|NP_632064.1| - 0.029 13.2 0.2 0.17 10.7 0.0 2.2 3 0 0 3 3 3 0 Type II/IV secretion system protein AAA_10 PF12846.2 gi|21226142|ref|NP_632064.1| - 0.056 12.8 1.2 0.29 10.5 0.2 2.1 1 1 1 2 2 2 0 AAA-like domain SbcCD_C PF13558.1 gi|21226142|ref|NP_632064.1| - 0.06 13.2 0.6 0.35 10.8 0.5 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.15 gi|21226142|ref|NP_632064.1| - 0.063 11.9 0.1 0.25 9.9 0.0 1.9 1 1 1 2 2 2 0 G-protein alpha subunit AAA_33 PF13671.1 gi|21226142|ref|NP_632064.1| - 0.071 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|21226142|ref|NP_632064.1| - 0.12 12.1 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain Mg_chelatase PF01078.16 gi|21226142|ref|NP_632064.1| - 0.12 11.4 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI BPD_transp_1 PF00528.17 gi|21226143|ref|NP_632065.1| - 6.2e-28 97.5 9.3 6.2e-28 97.5 6.4 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3464 PF11947.3 gi|21226143|ref|NP_632065.1| - 7.9 5.9 6.6 3.5 7.0 1.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3464) OpuAC PF04069.7 gi|21226144|ref|NP_632066.1| - 2.7e-70 236.6 1.6 3.2e-70 236.4 1.1 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NosD PF05048.8 gi|21226145|ref|NP_632067.1| - 1.5e-57 194.5 33.0 1.5e-57 194.5 22.9 4.9 4 1 1 5 5 5 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226145|ref|NP_632067.1| - 2e-25 89.3 102.1 2.1e-13 50.3 25.5 5.3 3 1 3 6 6 6 3 Right handed beta helix region PKD PF00801.15 gi|21226145|ref|NP_632067.1| - 5e-23 80.6 12.6 4.1e-12 45.6 0.9 3.1 2 0 0 2 2 2 2 PKD domain Lactonase PF10282.4 gi|21226145|ref|NP_632067.1| - 1.4e-12 47.4 6.2 0.00012 21.3 0.0 3.3 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|21226145|ref|NP_632067.1| - 8.9e-12 44.9 5.3 5.6e-05 22.6 1.0 3.7 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|21226145|ref|NP_632067.1| - 8.5e-11 41.2 8.2 0.39 10.7 0.0 6.5 5 0 0 5 5 5 4 NHL repeat Cytochrom_D1 PF02239.11 gi|21226145|ref|NP_632067.1| - 2.2e-08 32.8 5.9 2.5e-06 26.0 4.1 3.2 1 1 0 1 1 1 1 Cytochrome D1 heme domain Arylesterase PF01731.15 gi|21226145|ref|NP_632067.1| - 0.00017 21.5 8.2 0.18 11.8 0.1 5.8 3 2 3 6 6 6 1 Arylesterase SBP56 PF05694.6 gi|21226145|ref|NP_632067.1| - 0.013 14.0 0.1 6.4 5.1 0.0 3.6 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) CPSase_L_chain PF00289.17 gi|21226145|ref|NP_632067.1| - 0.062 13.4 0.4 2.6 8.1 0.0 3.1 2 1 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain DUF1513 PF07433.6 gi|21226145|ref|NP_632067.1| - 0.12 11.2 3.1 2.3 7.0 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1513) PQQ_3 PF13570.1 gi|21226145|ref|NP_632067.1| - 0.53 10.6 28.7 2 8.8 0.2 7.6 6 1 1 7 7 7 0 PQQ-like domain TPR_1 PF00515.23 gi|21226146|ref|NP_632068.1| - 9.3e-43 142.1 2.4 8.1e-09 34.7 0.0 7.2 5 1 2 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226146|ref|NP_632068.1| - 2.4e-36 120.7 3.3 1.3e-07 30.9 0.0 7.2 6 1 1 7 7 7 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226146|ref|NP_632068.1| - 4.5e-36 122.3 2.6 4.7e-13 48.5 0.0 5.6 2 2 2 5 5 5 5 TPR repeat TPR_8 PF13181.1 gi|21226146|ref|NP_632068.1| - 7.7e-28 94.1 1.8 8.3e-05 22.0 0.0 7.1 5 2 2 7 7 7 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226146|ref|NP_632068.1| - 1e-22 80.2 0.0 1.3e-06 28.9 0.0 5.1 4 1 2 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226146|ref|NP_632068.1| - 3e-22 78.2 0.0 6.3e-11 41.9 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226146|ref|NP_632068.1| - 3.7e-21 75.2 0.7 2.7e-07 30.7 0.0 5.2 4 2 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226146|ref|NP_632068.1| - 1.9e-20 72.5 2.1 6.9e-05 22.7 0.0 6.1 3 3 3 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226146|ref|NP_632068.1| - 3.4e-20 70.7 0.2 0.0034 17.8 0.0 6.6 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226146|ref|NP_632068.1| - 1.7e-17 62.0 0.1 0.0076 16.3 0.0 7.0 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226146|ref|NP_632068.1| - 2.2e-14 52.0 0.0 0.17 11.7 0.0 7.0 8 0 0 8 8 7 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226146|ref|NP_632068.1| - 3.5e-13 49.0 0.7 0.31 11.6 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21226146|ref|NP_632068.1| - 2.1e-12 47.0 0.6 0.0022 18.0 0.0 4.2 2 2 2 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|21226146|ref|NP_632068.1| - 2.7e-09 36.7 0.2 0.041 13.7 0.0 5.1 6 0 0 6 6 5 1 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|21226146|ref|NP_632068.1| - 1.1e-08 34.7 0.5 0.51 10.3 0.0 5.5 5 1 1 6 6 5 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|21226146|ref|NP_632068.1| - 2.6e-07 29.8 0.0 0.038 12.7 0.0 3.9 3 1 0 4 4 4 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|21226146|ref|NP_632068.1| - 3.8e-07 29.4 0.1 0.021 13.8 0.0 4.4 2 2 3 5 5 5 2 Tetratricopeptide repeat RPN7 PF10602.4 gi|21226146|ref|NP_632068.1| - 0.00017 20.9 0.5 1.1 8.5 0.1 4.0 2 2 2 4 4 4 1 26S proteasome subunit RPN7 MIT PF04212.13 gi|21226146|ref|NP_632068.1| - 0.00067 19.4 2.6 6.1 6.8 0.0 5.0 4 1 1 5 5 5 1 MIT (microtubule interacting and transport) domain TPR_4 PF07721.9 gi|21226146|ref|NP_632068.1| - 0.0023 18.1 0.0 3.8 8.2 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat DUF3856 PF12968.2 gi|21226146|ref|NP_632068.1| - 0.0042 16.9 1.5 3.6 7.3 0.5 4.4 3 1 1 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_21 PF09976.4 gi|21226146|ref|NP_632068.1| - 0.015 15.2 0.0 26 4.7 0.1 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|21226146|ref|NP_632068.1| - 0.11 11.6 0.0 1.5 7.8 0.0 2.6 3 0 0 3 3 3 0 Coatomer epsilon subunit PPR PF01535.15 gi|21226146|ref|NP_632068.1| - 0.3 11.1 0.0 0.3 11.1 0.0 5.8 7 1 1 8 8 5 0 PPR repeat Ank_2 PF12796.2 gi|21226147|ref|NP_632069.1| - 1.7e-96 316.7 21.3 1.5e-16 60.5 0.0 4.9 1 1 6 7 7 7 7 Ankyrin repeats (3 copies) Ank PF00023.25 gi|21226147|ref|NP_632069.1| - 3e-62 203.4 11.5 9.5e-09 34.6 0.2 9.1 9 0 0 9 9 9 8 Ankyrin repeat Ank_5 PF13857.1 gi|21226147|ref|NP_632069.1| - 2.7e-56 186.3 20.2 3.7e-11 42.8 0.0 6.2 1 1 5 7 7 7 7 Ankyrin repeats (many copies) Ank_4 PF13637.1 gi|21226147|ref|NP_632069.1| - 3.7e-51 170.6 9.7 7.3e-09 35.9 0.3 8.2 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_3 PF13606.1 gi|21226147|ref|NP_632069.1| - 1.7e-40 132.9 8.1 1.9e-05 24.4 0.0 9.0 9 0 0 9 9 9 7 Ankyrin repeat DUF3107 PF11305.3 gi|21226147|ref|NP_632069.1| - 5.5e-08 32.5 7.1 1.1 9.1 0.1 6.4 1 1 6 7 7 7 4 Protein of unknown function (DUF3107) Shigella_OspC PF06128.6 gi|21226147|ref|NP_632069.1| - 0.069 12.6 9.2 8.8 5.7 0.7 4.8 1 1 3 5 5 5 0 Shigella flexneri OspC protein PurS PF02700.9 gi|21226147|ref|NP_632069.1| - 0.27 11.2 2.1 44 4.1 0.0 3.6 4 0 0 4 4 4 0 Phosphoribosylformylglycinamidine (FGAM) synthase Aminotran_3 PF00202.16 gi|21226149|ref|NP_632071.1| - 2.1e-102 342.4 0.0 2.5e-102 342.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aldedh PF00171.17 gi|21226150|ref|NP_632072.1| - 2e-179 596.7 0.0 2.5e-179 596.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|21226150|ref|NP_632072.1| - 0.0022 16.7 0.0 0.006 15.3 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.6 gi|21226150|ref|NP_632072.1| - 0.055 12.6 0.0 2 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) Response_reg PF00072.19 gi|21226151|ref|NP_632073.1| - 2e-21 76.1 0.0 2.4e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF2795 PF11387.3 gi|21226151|ref|NP_632073.1| - 0.017 14.9 0.0 0.35 10.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) ThiG PF05690.9 gi|21226151|ref|NP_632073.1| - 0.021 13.8 0.0 0.029 13.4 0.0 1.2 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF2045 PF09741.4 gi|21226151|ref|NP_632073.1| - 0.055 12.5 0.1 0.06 12.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2045) Fer4_12 PF13353.1 gi|21226151|ref|NP_632073.1| - 0.081 13.0 0.0 12 6.0 0.0 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain GatB_N PF02934.10 gi|21226152|ref|NP_632074.1| - 3e-76 256.0 0.1 4.1e-76 255.5 0.1 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|21226152|ref|NP_632074.1| - 4e-23 81.7 0.1 8.6e-23 80.6 0.1 1.6 1 0 0 1 1 1 1 GatB domain GAD PF02938.9 gi|21226152|ref|NP_632074.1| - 4.4e-15 55.6 0.5 1.8e-14 53.6 0.0 2.2 2 0 0 2 2 2 1 GAD domain YqeY PF09424.5 gi|21226152|ref|NP_632074.1| - 1.6e-05 24.7 0.1 4.6e-05 23.3 0.1 1.8 1 1 0 1 1 1 1 Yqey-like protein DUF2999 PF11212.3 gi|21226152|ref|NP_632074.1| - 0.023 14.7 0.0 0.27 11.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2999) SnoaL_3 PF13474.1 gi|21226153|ref|NP_632075.1| - 3.4e-24 85.1 0.1 3.9e-24 85.0 0.1 1.0 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|21226153|ref|NP_632075.1| - 9.3e-11 41.8 0.1 1.1e-10 41.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.2 gi|21226153|ref|NP_632075.1| - 1.1e-08 35.4 0.0 1.4e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.5 gi|21226153|ref|NP_632075.1| - 7.3e-06 25.8 0.0 1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II Association DUF3225 PF11533.3 gi|21226153|ref|NP_632075.1| - 0.0027 17.4 0.0 0.0036 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3225) Lumazine_bd_2 PF12893.2 gi|21226153|ref|NP_632075.1| - 0.0099 16.4 0.3 0.013 16.0 0.2 1.2 1 0 0 1 1 1 1 Putative lumazine-binding SnoaL_4 PF13577.1 gi|21226153|ref|NP_632075.1| - 0.083 12.8 0.4 1.1 9.1 0.2 2.0 1 1 0 1 1 1 0 SnoaL-like domain DUF2247 PF10004.4 gi|21226153|ref|NP_632075.1| - 0.083 12.5 0.3 0.75 9.4 0.0 2.0 1 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2247) DUF2884 PF11101.3 gi|21226153|ref|NP_632075.1| - 0.11 11.9 0.1 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) Transposase_20 PF02371.11 gi|21226154|ref|NP_632076.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21226154|ref|NP_632076.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21226154|ref|NP_632076.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein Usp PF00582.21 gi|21226156|ref|NP_632078.1| - 2.5e-34 118.4 0.2 2.9e-34 118.2 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family PGM_PMM_I PF02878.11 gi|21226156|ref|NP_632078.1| - 0.0028 17.1 0.0 0.0047 16.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fer4_7 PF12838.2 gi|21226157|ref|NP_632079.1| - 6.2e-29 100.1 69.8 1.3e-10 41.5 5.6 5.6 4 2 0 5 5 5 4 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21226157|ref|NP_632079.1| - 7.8e-27 91.7 92.9 2.8e-07 29.8 1.7 9.0 10 0 0 10 10 8 8 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226157|ref|NP_632079.1| - 4.7e-21 74.3 72.2 1.4e-06 28.0 6.9 6.6 4 2 3 7 7 7 6 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226157|ref|NP_632079.1| - 6.9e-20 71.0 75.4 5.8e-07 29.6 5.4 6.9 2 2 6 8 8 8 8 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226157|ref|NP_632079.1| - 2.5e-18 66.5 69.0 0.0001 22.9 4.3 8.1 5 3 2 7 7 7 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21226157|ref|NP_632079.1| - 6.2e-18 64.4 69.4 9.9e-05 22.1 5.4 6.9 6 1 1 7 7 6 6 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226157|ref|NP_632079.1| - 1.9e-17 62.0 79.1 0.00025 20.7 1.7 9.3 9 0 0 9 9 9 7 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226157|ref|NP_632079.1| - 3.7e-16 58.1 86.2 7.2e-06 25.6 1.6 9.0 9 1 0 9 9 8 8 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226157|ref|NP_632079.1| - 2.6e-12 46.5 72.6 1.2e-05 25.1 7.7 6.4 2 2 6 8 8 8 7 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226157|ref|NP_632079.1| - 4.2e-07 30.2 67.4 0.0058 16.9 7.0 8.3 5 1 5 10 10 9 6 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21226157|ref|NP_632079.1| - 3.6e-06 27.4 58.0 0.069 13.7 0.5 8.9 9 0 0 9 9 9 6 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21226157|ref|NP_632079.1| - 0.00018 21.8 58.3 0.073 13.5 0.1 8.7 9 0 0 9 9 8 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21226157|ref|NP_632079.1| - 0.0012 18.9 89.7 0.015 15.6 2.3 9.4 9 0 0 9 9 9 4 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21226157|ref|NP_632079.1| - 0.003 17.4 44.4 0.022 14.6 9.4 5.8 2 2 2 5 5 5 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21226157|ref|NP_632079.1| - 0.038 14.5 5.9 0.038 14.5 4.1 9.7 10 0 0 10 10 9 0 4Fe-4S binding domain FlpD PF02662.11 gi|21226158|ref|NP_632080.1| - 2.7e-49 165.9 4.8 4.3e-49 165.3 0.1 3.3 4 0 0 4 4 4 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4_7 PF12838.2 gi|21226158|ref|NP_632080.1| - 2.4e-14 53.4 50.0 2.5e-09 37.3 8.8 5.3 3 2 4 7 7 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226158|ref|NP_632080.1| - 6.1e-14 51.1 58.1 7.3e-06 25.6 2.8 6.7 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4 PF00037.22 gi|21226158|ref|NP_632080.1| - 7.6e-14 50.6 57.4 9.6e-07 28.1 2.4 6.2 6 1 0 6 6 5 3 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226158|ref|NP_632080.1| - 3.5e-13 49.1 38.6 5.8e-07 29.2 8.5 5.0 4 1 2 6 6 5 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226158|ref|NP_632080.1| - 1e-12 47.1 46.9 6.6e-06 25.7 1.8 5.9 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21226158|ref|NP_632080.1| - 1.5e-12 47.1 49.5 5.6e-08 32.5 8.0 5.8 7 0 0 7 7 5 3 4Fe-4S dicluster domain Pyr_redox_2 PF07992.9 gi|21226158|ref|NP_632080.1| - 7.5e-11 42.2 4.1 1.1e-08 35.2 2.8 3.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_9 PF13187.1 gi|21226158|ref|NP_632080.1| - 7.5e-11 42.1 42.0 3.1e-07 30.5 8.6 5.3 4 1 2 6 6 6 4 4Fe-4S dicluster domain DAO PF01266.19 gi|21226158|ref|NP_632080.1| - 8.9e-09 34.6 1.1 7.3e-06 25.1 0.4 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_15 PF13459.1 gi|21226158|ref|NP_632080.1| - 1.1e-07 32.3 22.6 0.024 15.1 0.5 5.0 4 0 0 4 4 4 3 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|21226158|ref|NP_632080.1| - 1.1e-07 32.4 34.3 0.0047 17.6 5.8 5.2 6 0 0 6 6 4 3 4Fe-4S double cluster binding domain Pyr_redox PF00070.22 gi|21226158|ref|NP_632080.1| - 7.1e-07 29.5 0.7 1.5e-05 25.2 0.5 2.8 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_17 PF13534.1 gi|21226158|ref|NP_632080.1| - 8.5e-07 29.2 32.3 0.0011 19.2 3.1 4.6 4 1 0 4 4 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226158|ref|NP_632080.1| - 1.7e-06 27.9 40.7 0.00023 21.1 8.0 5.0 2 2 4 6 6 6 4 4Fe-4S dicluster domain FAD_binding_2 PF00890.19 gi|21226158|ref|NP_632080.1| - 2e-06 26.9 0.9 4.4e-06 25.8 0.6 1.5 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.17 gi|21226158|ref|NP_632080.1| - 3.3e-06 26.2 0.4 1e-05 24.6 0.2 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|21226158|ref|NP_632080.1| - 3.7e-06 26.8 0.0 9e-06 25.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.2 gi|21226158|ref|NP_632080.1| - 1e-05 24.8 0.2 1.7e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|21226158|ref|NP_632080.1| - 1.9e-05 24.7 1.1 0.00037 20.6 0.2 2.7 2 1 1 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|21226158|ref|NP_632080.1| - 9.2e-05 21.6 0.7 0.00015 20.9 0.5 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|21226158|ref|NP_632080.1| - 0.00012 20.7 0.5 0.00036 19.1 0.5 1.6 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|21226158|ref|NP_632080.1| - 0.00024 20.2 0.0 0.00054 19.1 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Fer4_13 PF13370.1 gi|21226158|ref|NP_632080.1| - 0.0022 18.3 29.3 0.19 12.1 1.3 4.7 4 0 0 4 4 4 3 4Fe-4S single cluster domain K_oxygenase PF13434.1 gi|21226158|ref|NP_632080.1| - 0.0055 15.6 0.2 3 6.6 0.0 2.8 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Amino_oxidase PF01593.19 gi|21226158|ref|NP_632080.1| - 0.007 15.4 0.1 0.017 14.2 0.0 1.6 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_7 PF13241.1 gi|21226158|ref|NP_632080.1| - 0.0078 16.4 0.2 0.055 13.7 0.0 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.16 gi|21226158|ref|NP_632080.1| - 0.014 14.9 0.1 0.031 13.8 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_4 PF12800.2 gi|21226158|ref|NP_632080.1| - 0.014 15.6 3.5 0.014 15.6 2.4 5.9 7 0 0 7 7 4 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21226158|ref|NP_632080.1| - 0.018 14.9 23.6 0.035 14.0 1.2 3.9 3 1 0 3 3 3 0 4Fe-4S dicluster domain NAD_binding_9 PF13454.1 gi|21226158|ref|NP_632080.1| - 0.022 14.5 0.1 2.6 7.8 0.0 2.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding 3HCDH_N PF02737.13 gi|21226158|ref|NP_632080.1| - 0.024 14.2 0.5 0.051 13.2 0.4 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Response_reg PF00072.19 gi|21226158|ref|NP_632080.1| - 0.11 12.5 0.0 2.8 7.9 0.0 2.6 2 0 0 2 2 2 0 Response regulator receiver domain Lycopene_cycl PF05834.7 gi|21226158|ref|NP_632080.1| - 0.12 11.2 0.3 0.4 9.5 0.3 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.9 gi|21226158|ref|NP_632080.1| - 0.13 10.9 1.7 0.28 9.7 0.5 1.8 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_3 PF12798.2 gi|21226158|ref|NP_632080.1| - 0.14 12.7 67.6 0.078 13.5 2.4 7.1 7 0 0 7 7 5 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21226158|ref|NP_632080.1| - 0.16 12.4 45.9 0.23 11.8 2.7 5.8 5 1 1 6 6 5 0 4Fe-4S dicluster domain FeThRed_B PF02943.10 gi|21226159|ref|NP_632081.1| - 2.2e-23 82.0 1.6 2.6e-23 81.8 1.1 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain FeS PF04060.8 gi|21226160|ref|NP_632082.1| - 6.1e-14 51.3 2.2 6.1e-14 51.3 1.5 2.5 3 0 0 3 3 3 1 Putative Fe-S cluster Fer4_7 PF12838.2 gi|21226160|ref|NP_632082.1| - 1.4e-06 28.5 12.3 0.00029 21.1 4.1 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21226160|ref|NP_632082.1| - 2e-06 27.1 22.2 8.2e-06 25.2 2.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21226160|ref|NP_632082.1| - 3.5e-06 27.1 23.4 0.00017 21.7 2.9 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226160|ref|NP_632082.1| - 0.00017 21.4 11.9 0.0028 17.4 0.4 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226160|ref|NP_632082.1| - 0.00017 21.3 2.5 0.00017 21.3 1.7 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21226160|ref|NP_632082.1| - 0.00073 19.6 1.7 0.00073 19.6 1.2 3.5 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226160|ref|NP_632082.1| - 0.00094 19.1 12.4 0.0039 17.1 4.5 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21226160|ref|NP_632082.1| - 0.0021 18.5 0.2 0.0021 18.5 0.1 2.9 3 1 0 3 3 3 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21226160|ref|NP_632082.1| - 0.0024 18.1 4.4 0.0024 18.1 3.0 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain YhfH PF14149.1 gi|21226160|ref|NP_632082.1| - 0.0051 16.5 2.1 0.0051 16.5 1.4 2.3 2 0 0 2 2 1 1 YhfH-like protein Fer4_6 PF12837.2 gi|21226160|ref|NP_632082.1| - 0.0067 16.2 3.7 0.0067 16.2 2.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226160|ref|NP_632082.1| - 0.014 15.1 10.1 0.014 15.1 7.0 3.3 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226160|ref|NP_632082.1| - 0.031 15.0 16.7 1.1 10.0 0.3 2.9 2 1 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|21226160|ref|NP_632082.1| - 0.37 11.4 24.7 0.25 11.9 1.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21226160|ref|NP_632082.1| - 0.4 10.5 9.2 1.1 9.2 3.5 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226160|ref|NP_632082.1| - 0.46 10.9 15.4 2.2 8.7 5.9 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226160|ref|NP_632082.1| - 2.7 8.4 14.4 3.6 8.0 5.4 3.1 2 1 0 2 2 2 0 4Fe-4S single cluster domain TPP_enzyme_M PF00205.17 gi|21226161|ref|NP_632083.1| - 2.4e-06 27.3 0.6 0.0011 18.6 0.0 3.3 3 1 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|21226161|ref|NP_632083.1| - 0.057 12.9 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Molydop_binding PF01568.16 gi|21226162|ref|NP_632084.1| - 2.4e-14 53.0 0.0 3.6e-14 52.5 0.0 1.3 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.13 gi|21226162|ref|NP_632084.1| - 0.017 15.0 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Methyltransf_11 PF08241.7 gi|21226164|ref|NP_632086.1| - 8.4e-17 61.4 0.0 1.5e-16 60.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226164|ref|NP_632086.1| - 3.8e-11 42.9 0.0 5.7e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21226164|ref|NP_632086.1| - 1.4e-08 35.1 0.0 3.8e-08 33.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226164|ref|NP_632086.1| - 2.8e-08 33.1 0.0 6.8e-08 31.9 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.1 gi|21226164|ref|NP_632086.1| - 9.8e-08 31.7 0.0 5.6e-07 29.2 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226164|ref|NP_632086.1| - 1.8e-06 28.2 0.0 3.5e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226164|ref|NP_632086.1| - 2.1e-06 28.2 1.0 5.5e-06 26.9 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.6 gi|21226164|ref|NP_632086.1| - 8.5e-05 21.3 0.0 0.00011 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MR_MLE_C PF13378.1 gi|21226164|ref|NP_632086.1| - 0.011 15.7 0.0 0.034 14.1 0.0 1.8 2 0 0 2 2 2 0 Enolase C-terminal domain-like Methyltransf_26 PF13659.1 gi|21226164|ref|NP_632086.1| - 0.025 14.6 0.1 0.1 12.6 0.1 2.0 1 1 0 1 1 1 0 Methyltransferase domain MetW PF07021.7 gi|21226164|ref|NP_632086.1| - 0.026 13.9 0.0 0.036 13.4 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.11 gi|21226164|ref|NP_632086.1| - 0.051 11.9 0.0 0.06 11.6 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase DREV PF05219.7 gi|21226164|ref|NP_632086.1| - 0.081 11.7 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_8 PF05148.10 gi|21226164|ref|NP_632086.1| - 0.16 11.5 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase NosD PF05048.8 gi|21226165|ref|NP_632087.1| - 5.8e-79 264.5 55.5 2.9e-61 206.6 23.2 2.5 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226165|ref|NP_632087.1| - 6.5e-23 81.2 30.0 6.5e-23 81.2 20.8 2.8 2 1 1 3 3 3 2 Right handed beta helix region PKD PF00801.15 gi|21226165|ref|NP_632087.1| - 1.2e-08 34.6 0.8 1.2e-08 34.6 0.6 2.3 3 0 0 3 3 3 1 PKD domain VCBS PF13517.1 gi|21226165|ref|NP_632087.1| - 9.2 6.7 7.4 4.4 7.7 0.3 3.6 3 0 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella NosD PF05048.8 gi|21226166|ref|NP_632088.1| - 5.4e-103 343.2 138.3 1.3e-53 181.5 26.8 4.4 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226166|ref|NP_632088.1| - 5.7e-60 201.6 135.7 1.4e-19 70.4 23.2 4.9 2 1 3 5 5 5 4 Right handed beta helix region Pectate_lyase_3 PF12708.2 gi|21226166|ref|NP_632088.1| - 0.12 12.4 71.6 0.056 13.5 9.6 5.4 1 1 4 5 5 5 0 Pectate lyase superfamily protein NosD PF05048.8 gi|21226168|ref|NP_632090.1| - 1.2e-86 289.6 159.7 8.3e-47 159.3 36.5 5.9 2 1 4 6 6 6 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226168|ref|NP_632090.1| - 4.8e-50 169.4 208.2 1.6e-18 66.9 24.1 5.9 2 2 4 6 6 6 4 Right handed beta helix region PKD PF00801.15 gi|21226168|ref|NP_632090.1| - 3e-22 78.1 16.2 1.8e-14 53.2 3.6 2.9 2 0 0 2 2 2 2 PKD domain DUF1565 PF07602.6 gi|21226168|ref|NP_632090.1| - 7.5 5.6 104.8 61 2.6 14.7 6.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1565) Hist_deacetyl PF00850.14 gi|21226169|ref|NP_632091.1| - 1.4e-65 221.5 0.0 1.4e-64 218.3 0.0 1.9 1 1 1 2 2 2 1 Histone deacetylase domain Hydantoinase_A PF01968.13 gi|21226170|ref|NP_632092.1| - 3.1e-68 229.9 8.3 5.7e-64 215.9 2.3 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21226170|ref|NP_632092.1| - 2e-42 144.6 0.3 1e-38 132.6 0.0 3.3 3 1 0 3 3 3 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21226170|ref|NP_632092.1| - 8.2e-06 24.4 1.0 0.012 13.9 0.1 2.3 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21226170|ref|NP_632092.1| - 1.5e-05 24.4 0.0 0.0017 17.7 0.0 3.0 2 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.1 gi|21226170|ref|NP_632092.1| - 8.8e-05 22.3 3.9 0.063 13.1 0.1 3.2 3 1 0 3 3 3 2 Cell division protein FtsA MreB_Mbl PF06723.8 gi|21226170|ref|NP_632092.1| - 0.00052 18.7 1.9 0.005 15.4 0.2 2.7 2 0 0 2 2 2 1 MreB/Mbl protein DDR PF08841.5 gi|21226170|ref|NP_632092.1| - 0.001 17.9 1.9 0.0038 16.1 0.4 2.1 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain EutA PF06277.6 gi|21226170|ref|NP_632092.1| - 0.0021 16.7 3.3 0.61 8.6 0.0 2.7 3 0 0 3 3 3 2 Ethanolamine utilisation protein EutA Ppx-GppA PF02541.11 gi|21226170|ref|NP_632092.1| - 0.0078 15.4 1.9 0.068 12.3 0.1 2.5 3 0 0 3 3 3 1 Ppx/GppA phosphatase family StbA PF06406.6 gi|21226170|ref|NP_632092.1| - 0.012 14.6 1.7 0.28 10.0 0.0 3.0 3 0 0 3 3 3 0 StbA protein DEDD_Tnp_IS110 PF01548.12 gi|21226170|ref|NP_632092.1| - 0.11 12.2 0.0 0.3 10.7 0.0 1.8 1 0 0 1 1 1 0 Transposase SBF PF01758.11 gi|21226171|ref|NP_632093.1| - 7.4e-45 152.6 18.0 1.5e-44 151.6 12.5 1.5 1 0 0 1 1 1 1 Sodium Bile acid symporter family DUF4137 PF13593.1 gi|21226171|ref|NP_632093.1| - 3.8e-19 68.9 20.2 4.5e-19 68.7 14.0 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.13 gi|21226171|ref|NP_632093.1| - 0.47 8.6 18.8 0.012 13.9 4.9 2.8 1 1 3 4 4 4 0 Membrane transport protein S4 PF01479.20 gi|21226172|ref|NP_632094.1| - 2.2e-12 46.2 0.3 5.1e-12 45.0 0.1 1.8 2 0 0 2 2 2 1 S4 domain Methyltransf_31 PF13847.1 gi|21226172|ref|NP_632094.1| - 2.9e-09 36.6 0.0 5.2e-09 35.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.14 gi|21226172|ref|NP_632094.1| - 1.4e-07 31.6 0.0 2.8e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Fibrillarin PF01269.12 gi|21226172|ref|NP_632094.1| - 2.3e-07 30.0 0.0 3e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_26 PF13659.1 gi|21226172|ref|NP_632094.1| - 7.1e-07 29.2 0.0 1.3e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226172|ref|NP_632094.1| - 1.2e-06 29.1 0.0 1.8e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226172|ref|NP_632094.1| - 3.9e-05 23.4 0.0 5.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226172|ref|NP_632094.1| - 8.8e-05 22.9 0.0 0.00019 21.8 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain S4_2 PF13275.1 gi|21226172|ref|NP_632094.1| - 0.00025 20.5 0.0 0.00053 19.5 0.0 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_24 PF13578.1 gi|21226172|ref|NP_632094.1| - 0.0029 18.4 0.0 0.0049 17.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226172|ref|NP_632094.1| - 0.019 15.3 0.0 0.029 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF2119 PF09892.4 gi|21226173|ref|NP_632095.1| - 1.6e-80 268.9 0.0 1.9e-80 268.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) Cpn60_TCP1 PF00118.19 gi|21226174|ref|NP_632096.1| - 3.3e-156 520.7 11.4 3.8e-156 520.5 7.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GARS_A PF01071.14 gi|21226174|ref|NP_632096.1| - 0.011 15.2 1.2 0.072 12.6 0.3 2.3 1 1 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DUF2294 PF10057.4 gi|21226174|ref|NP_632096.1| - 0.033 13.8 0.0 0.096 12.3 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) Rib_5-P_isom_A PF06026.9 gi|21226175|ref|NP_632097.1| - 1.3e-60 203.6 0.2 1.9e-60 203.1 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|21226175|ref|NP_632097.1| - 1.2e-06 28.2 0.5 0.00048 19.8 0.0 2.2 1 1 0 2 2 2 2 DeoR C terminal sensor domain Sugar-bind PF04198.8 gi|21226175|ref|NP_632097.1| - 0.043 12.7 0.1 0.071 11.9 0.0 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain DUF2478 PF10649.4 gi|21226175|ref|NP_632097.1| - 0.044 13.1 0.1 0.11 11.7 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2478) tRNA-synt_2 PF00152.15 gi|21226176|ref|NP_632098.1| - 1.7e-93 313.0 0.3 2.1e-93 312.7 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|21226176|ref|NP_632098.1| - 8.9e-15 54.3 0.1 1.7e-14 53.4 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|21226176|ref|NP_632098.1| - 0.00016 20.9 1.4 0.024 13.8 0.0 3.1 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) Cupredoxin_1 PF13473.1 gi|21226177|ref|NP_632099.1| - 5.5e-10 39.0 0.1 7.1e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|21226177|ref|NP_632099.1| - 1.1e-09 38.4 0.8 8e-09 35.6 0.5 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Metallophos_2 PF12850.2 gi|21226179|ref|NP_632101.1| - 2e-14 53.7 0.1 2.6e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21226179|ref|NP_632101.1| - 2e-06 27.3 4.2 1.7e-05 24.2 2.9 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|21226179|ref|NP_632101.1| - 0.012 14.8 0.0 2.4 7.2 0.0 2.4 2 1 0 2 2 2 0 Metallophosphoesterase, calcineurin superfamily REJ PF02010.10 gi|21226179|ref|NP_632101.1| - 0.087 11.1 0.0 0.094 11.0 0.0 1.1 1 0 0 1 1 1 0 REJ domain EppA_BapA PF07268.6 gi|21226179|ref|NP_632101.1| - 0.15 11.6 0.0 4.7 6.8 0.0 2.8 2 1 0 2 2 2 0 Exported protein precursor (EppA/BapA) Pribosyltran PF00156.22 gi|21226180|ref|NP_632102.1| - 1.7e-09 37.4 0.8 2.2e-09 37.1 0.1 1.5 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Borrelia_lipo_1 PF05714.6 gi|21226181|ref|NP_632103.1| - 0.15 11.1 2.9 0.4 9.7 0.3 2.1 2 0 0 2 2 2 0 Borrelia burgdorferi virulent strain associated lipoprotein GHL5 PF14872.1 gi|21226182|ref|NP_632104.1| - 0.019 12.7 0.3 0.13 9.9 0.1 1.9 1 1 1 2 2 2 0 Hypothetical glycoside hydrolase 5 DUF711 PF05167.7 gi|21226183|ref|NP_632105.1| - 1e-182 607.3 6.8 1.2e-182 607.0 4.7 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) ACT_6 PF13740.1 gi|21226184|ref|NP_632106.1| - 2.5e-18 65.5 0.3 2.9e-18 65.3 0.2 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|21226184|ref|NP_632106.1| - 4.7e-10 38.7 0.3 5.7e-10 38.4 0.2 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.1 gi|21226184|ref|NP_632106.1| - 1.7e-05 25.0 0.9 2.8e-05 24.3 0.6 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.1 gi|21226184|ref|NP_632106.1| - 0.005 16.3 0.6 0.0071 15.8 0.4 1.3 1 0 0 1 1 1 1 ACT domain SKI PF01202.17 gi|21226186|ref|NP_632108.1| - 7.7e-33 113.5 0.0 8.8e-33 113.4 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_17 PF13207.1 gi|21226186|ref|NP_632108.1| - 1.1e-09 39.1 0.1 1.9e-09 38.3 0.1 1.5 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|21226186|ref|NP_632108.1| - 1.2e-07 32.0 0.1 2.3e-07 31.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 gi|21226186|ref|NP_632108.1| - 5.3e-07 29.7 0.2 8.5e-06 25.7 0.1 2.2 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_33 PF13671.1 gi|21226186|ref|NP_632108.1| - 3.9e-05 23.5 0.0 6.1e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21226186|ref|NP_632108.1| - 0.0078 16.4 0.0 0.016 15.3 0.0 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ATP_bind_2 PF03668.10 gi|21226186|ref|NP_632108.1| - 0.012 14.6 0.3 0.037 13.0 0.2 1.6 1 1 0 1 1 1 0 P-loop ATPase protein family ABC_tran PF00005.22 gi|21226186|ref|NP_632108.1| - 0.015 15.6 0.0 0.024 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_2 PF07724.9 gi|21226186|ref|NP_632108.1| - 0.021 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) APS_kinase PF01583.15 gi|21226186|ref|NP_632108.1| - 0.023 14.3 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_22 PF13401.1 gi|21226186|ref|NP_632108.1| - 0.039 14.0 0.0 0.087 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|21226186|ref|NP_632108.1| - 0.046 12.5 0.1 0.067 12.0 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.1 gi|21226186|ref|NP_632108.1| - 0.061 12.8 0.1 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain CoaE PF01121.15 gi|21226186|ref|NP_632108.1| - 0.065 12.6 0.1 0.1 11.9 0.0 1.3 1 0 0 1 1 1 0 Dephospho-CoA kinase Trm56 PF01994.11 gi|21226188|ref|NP_632110.1| - 9.8e-50 167.3 0.0 1.2e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 PYNP_C PF07831.8 gi|21226189|ref|NP_632111.1| - 1.2e-18 66.3 0.1 3e-18 65.0 0.1 1.8 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.16 gi|21226189|ref|NP_632111.1| - 4.1e-15 55.8 0.2 3.5e-14 52.8 0.1 2.1 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|21226189|ref|NP_632111.1| - 1.4e-13 50.2 0.0 3e-13 49.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.16 gi|21226189|ref|NP_632111.1| - 0.00049 19.8 0.0 0.0017 18.1 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Biotin_lipoyl_2 PF13533.1 gi|21226189|ref|NP_632111.1| - 0.0019 17.7 0.1 0.0054 16.3 0.1 1.7 1 0 0 1 1 1 1 Biotin-lipoyl like Biotin_lipoyl PF00364.17 gi|21226189|ref|NP_632111.1| - 0.0069 15.9 0.1 0.046 13.3 0.0 2.5 1 0 0 1 1 1 1 Biotin-requiring enzyme CDC48_N PF02359.13 gi|21226189|ref|NP_632111.1| - 0.018 14.9 0.0 0.049 13.5 0.0 1.7 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain DUF2254 PF10011.4 gi|21226189|ref|NP_632111.1| - 0.02 13.3 0.1 0.03 12.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) HlyD_3 PF13437.1 gi|21226189|ref|NP_632111.1| - 0.058 13.7 0.3 0.37 11.1 0.0 2.5 3 0 0 3 3 3 0 HlyD family secretion protein EamA PF00892.15 gi|21226190|ref|NP_632112.1| - 3.3e-44 149.9 37.3 3.9e-26 91.5 10.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21226190|ref|NP_632112.1| - 1.2e-09 38.3 38.4 5.7e-06 26.5 6.3 3.5 2 2 2 4 4 4 2 Multidrug resistance efflux transporter TPT PF03151.11 gi|21226190|ref|NP_632112.1| - 0.0014 18.3 21.9 0.069 12.8 5.7 2.5 2 1 0 2 2 2 2 Triose-phosphate Transporter family UPF0546 PF10639.4 gi|21226190|ref|NP_632112.1| - 0.051 13.4 8.2 0.94 9.3 0.3 2.6 2 1 0 2 2 2 0 Uncharacterised protein family UPF0546 TcpE PF12648.2 gi|21226190|ref|NP_632112.1| - 0.084 13.0 14.3 0.17 12.0 1.3 3.2 2 1 1 3 3 3 0 TcpE family SLAC1 PF03595.12 gi|21226191|ref|NP_632113.1| - 0.0098 14.5 1.9 0.011 14.4 1.3 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel Arteri_Gl PF00951.13 gi|21226191|ref|NP_632113.1| - 0.013 15.0 1.7 0.013 15.0 1.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2207 PF09972.4 gi|21226191|ref|NP_632113.1| - 0.016 13.7 2.9 0.017 13.7 2.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) VIT1 PF01988.14 gi|21226191|ref|NP_632113.1| - 0.018 14.5 2.9 0.019 14.4 2.0 1.0 1 0 0 1 1 1 0 VIT family ABC2_membrane_5 PF13346.1 gi|21226191|ref|NP_632113.1| - 0.026 13.8 3.9 0.026 13.8 2.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DGF-1_5 PF11038.3 gi|21226191|ref|NP_632113.1| - 0.045 12.9 0.3 0.045 12.9 0.2 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 HlyIII PF03006.15 gi|21226191|ref|NP_632113.1| - 0.049 13.0 2.3 0.051 12.9 1.6 1.0 1 0 0 1 1 1 0 Haemolysin-III related DUF3815 PF12821.2 gi|21226191|ref|NP_632113.1| - 0.083 12.8 2.7 0.1 12.5 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3815) DUF2809 PF10990.3 gi|21226191|ref|NP_632113.1| - 0.09 13.1 1.9 0.11 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) NfeD PF01957.13 gi|21226191|ref|NP_632113.1| - 0.15 12.1 5.0 0.16 12.0 3.5 1.0 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF983 PF06170.7 gi|21226191|ref|NP_632113.1| - 0.18 11.9 2.2 0.2 11.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF983) SUR7 PF06687.7 gi|21226191|ref|NP_632113.1| - 0.19 11.3 2.2 0.19 11.2 1.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family ABC2_membrane_3 PF12698.2 gi|21226191|ref|NP_632113.1| - 0.2 10.6 5.4 0.21 10.5 3.8 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF161 PF02588.10 gi|21226191|ref|NP_632113.1| - 0.26 11.5 3.6 0.36 11.1 2.5 1.3 1 0 0 1 1 1 0 Uncharacterized BCR, YitT family COG1284 RseC_MucC PF04246.7 gi|21226191|ref|NP_632113.1| - 0.26 10.8 3.3 0.28 10.7 2.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1129 PF06570.6 gi|21226191|ref|NP_632113.1| - 0.28 10.4 2.3 0.31 10.3 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF1469 PF07332.6 gi|21226191|ref|NP_632113.1| - 0.36 10.5 4.1 0.42 10.3 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) SdpI PF13630.1 gi|21226191|ref|NP_632113.1| - 0.64 9.7 8.0 0.79 9.4 5.5 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF2975 PF11188.3 gi|21226191|ref|NP_632113.1| - 0.85 9.3 5.7 1 9.0 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Tetraspannin PF00335.15 gi|21226191|ref|NP_632113.1| - 0.91 8.7 4.4 1 8.6 3.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Internalin_N PF12354.3 gi|21226191|ref|NP_632113.1| - 1.8 8.2 4.7 0.76 9.4 0.3 2.0 2 0 0 2 2 2 0 Bacterial adhesion/invasion protein N terminal DUF2681 PF10883.3 gi|21226191|ref|NP_632113.1| - 2 8.6 6.1 2.7 8.2 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) PrgI PF12666.2 gi|21226191|ref|NP_632113.1| - 2.5 8.3 5.7 3.7 7.7 4.0 1.3 1 0 0 1 1 1 0 PrgI family protein DUF4229 PF14012.1 gi|21226191|ref|NP_632113.1| - 4.7 7.1 7.6 6.3 6.7 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) MacB_PCD PF12704.2 gi|21226193|ref|NP_632115.1| - 4.9e-31 108.1 0.3 4.9e-31 108.1 0.2 2.2 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21226193|ref|NP_632115.1| - 3.2e-17 62.4 13.9 3.2e-17 62.4 9.6 2.2 2 0 0 2 2 2 1 FtsX-like permease family Glyco_hydro_2 PF00703.16 gi|21226194|ref|NP_632116.1| - 0.023 15.1 0.8 1.2 9.5 0.1 2.7 2 1 0 2 2 2 0 Glycosyl hydrolases family 2 GATase_3 PF07685.9 gi|21226195|ref|NP_632117.1| - 3.4e-43 146.9 0.1 5.6e-43 146.2 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|21226195|ref|NP_632117.1| - 3.1e-25 88.7 0.0 5e-25 88.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|21226195|ref|NP_632117.1| - 7e-19 68.2 0.0 1.6e-18 67.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain GATase PF00117.23 gi|21226195|ref|NP_632117.1| - 8.6e-07 28.5 0.1 3.1e-06 26.7 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase class-I SNO PF01174.14 gi|21226195|ref|NP_632117.1| - 0.0044 16.6 0.0 0.0085 15.7 0.0 1.5 1 0 0 1 1 1 1 SNO glutamine amidotransferase family MobB PF03205.9 gi|21226195|ref|NP_632117.1| - 0.026 14.2 0.0 0.1 12.3 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Erythro_esteras PF05139.9 gi|21226196|ref|NP_632118.1| - 0.024 13.8 0.1 0.046 12.8 0.0 1.4 2 0 0 2 2 2 0 Erythromycin esterase DUF4528 PF15031.1 gi|21226197|ref|NP_632119.1| - 0.037 13.7 0.2 0.18 11.5 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4528) SWM_repeat PF13753.1 gi|21226197|ref|NP_632119.1| - 0.089 11.8 0.1 0.93 8.4 0.0 2.0 2 0 0 2 2 2 0 Putative flagellar system-associated repeat Transposase_20 PF02371.11 gi|21226198|ref|NP_632120.1| - 3.3e-29 100.8 0.0 8.1e-29 99.5 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21226198|ref|NP_632120.1| - 2.1e-25 89.0 0.1 3.8e-25 88.2 0.1 1.5 1 0 0 1 1 1 1 Transposase OCD_Mu_crystall PF02423.10 gi|21226199|ref|NP_632121.1| - 2.1e-108 361.8 0.1 2.4e-108 361.6 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.15 gi|21226199|ref|NP_632121.1| - 4.2e-07 30.1 0.0 7.9e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|21226199|ref|NP_632121.1| - 0.021 15.2 0.0 0.045 14.1 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sec34 PF04136.10 gi|21226199|ref|NP_632121.1| - 0.053 13.2 0.0 0.094 12.4 0.0 1.4 1 0 0 1 1 1 0 Sec34-like family THF_DHG_CYH_C PF02882.14 gi|21226199|ref|NP_632121.1| - 0.071 12.1 0.0 0.14 11.2 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF434 PF04256.7 gi|21226200|ref|NP_632122.1| - 1.2e-19 69.4 0.0 2.1e-19 68.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF434) TPR_17 PF13431.1 gi|21226201|ref|NP_632123.1| - 9.3e-30 100.3 1.1 7.2e-05 22.6 0.0 6.1 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226201|ref|NP_632123.1| - 5.3e-29 99.6 15.5 2.1e-11 43.2 0.1 3.6 2 1 2 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|21226201|ref|NP_632123.1| - 7.5e-25 84.8 14.6 8.4e-06 25.3 0.0 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226201|ref|NP_632123.1| - 2.6e-22 78.9 11.3 8.3e-08 32.7 0.1 3.8 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226201|ref|NP_632123.1| - 8.1e-21 72.6 7.4 0.0014 19.0 0.0 6.0 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226201|ref|NP_632123.1| - 1.3e-18 67.0 3.9 2.4e-05 24.5 0.3 4.3 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226201|ref|NP_632123.1| - 2.8e-18 64.6 7.5 5.4e-05 22.6 0.0 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226201|ref|NP_632123.1| - 9.6e-18 62.5 5.5 0.006 16.2 0.0 6.0 4 1 2 6 6 6 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226201|ref|NP_632123.1| - 1.2e-17 63.6 16.2 1.7e-07 31.0 0.2 4.3 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226201|ref|NP_632123.1| - 1.8e-09 36.6 8.4 0.073 12.9 0.0 5.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226201|ref|NP_632123.1| - 1.3e-07 31.3 7.3 0.0026 17.5 0.3 3.4 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226201|ref|NP_632123.1| - 1.1e-06 28.6 4.2 5 7.8 0.0 5.5 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|21226201|ref|NP_632123.1| - 1.2e-06 27.8 0.5 0.00088 18.4 0.1 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21226201|ref|NP_632123.1| - 3.8e-06 26.5 5.6 0.032 14.0 0.0 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|21226201|ref|NP_632123.1| - 4.9e-05 22.2 0.4 0.014 14.1 0.0 2.9 2 1 1 3 3 3 1 NMDA receptor-regulated protein 1 Apc3 PF12895.2 gi|21226201|ref|NP_632123.1| - 5.4e-05 23.2 6.1 0.1 12.7 0.0 3.4 1 1 3 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|21226201|ref|NP_632123.1| - 0.00033 20.4 11.9 2 8.4 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|21226201|ref|NP_632123.1| - 0.0052 16.8 0.1 1.8 8.7 0.0 3.6 1 1 4 5 5 5 1 Tetratricopeptide repeat Metallophos_2 PF12850.2 gi|21226201|ref|NP_632123.1| - 0.059 13.2 0.1 0.071 12.9 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain TPR_4 PF07721.9 gi|21226201|ref|NP_632123.1| - 0.42 11.1 9.1 7.8 7.2 0.3 5.2 6 1 0 6 6 6 0 Tetratricopeptide repeat TPPII_N PF12583.3 gi|21226201|ref|NP_632123.1| - 0.73 9.9 3.7 2.3 8.3 0.0 3.1 4 1 0 4 4 4 0 Tripeptidyl peptidase II N terminal TPR_21 PF09976.4 gi|21226201|ref|NP_632123.1| - 2.3 8.1 4.6 6 6.8 0.1 3.3 4 1 0 4 4 3 0 Tetratricopeptide repeat DUF4219 PF13961.1 gi|21226203|ref|NP_632125.1| - 0.0093 15.3 2.4 0.031 13.7 1.6 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4219) YozD PF14162.1 gi|21226203|ref|NP_632125.1| - 0.087 12.9 0.4 1.4 9.0 0.1 2.3 2 0 0 2 2 2 0 YozD-like protein Metallophos PF00149.23 gi|21226204|ref|NP_632126.1| - 2e-30 105.6 0.0 2.9e-30 105.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|21226204|ref|NP_632126.1| - 1.7e-07 31.1 0.0 2.2e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain TPR_11 PF13414.1 gi|21226205|ref|NP_632127.1| - 2.8e-46 155.0 33.8 7.4e-14 51.1 0.7 6.0 4 1 1 6 6 6 4 TPR repeat TPR_17 PF13431.1 gi|21226205|ref|NP_632127.1| - 4.1e-40 132.6 21.9 2.5e-05 24.1 0.0 9.5 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226205|ref|NP_632127.1| - 1.2e-38 127.9 37.6 2e-06 27.2 0.8 9.4 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226205|ref|NP_632127.1| - 1e-36 124.8 45.8 5.2e-08 33.3 1.7 6.0 2 1 4 7 7 7 7 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226205|ref|NP_632127.1| - 5e-30 101.2 20.8 0.0009 19.6 0.1 9.2 1 1 8 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226205|ref|NP_632127.1| - 2.2e-29 98.9 22.6 0.00025 20.6 0.5 8.8 8 1 1 9 9 9 8 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226205|ref|NP_632127.1| - 4.9e-29 100.4 18.3 3e-08 33.8 0.5 5.7 4 2 2 6 6 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226205|ref|NP_632127.1| - 1.1e-26 92.5 33.3 7e-11 41.9 0.8 6.3 3 1 4 7 7 6 5 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226205|ref|NP_632127.1| - 1.5e-25 87.6 27.0 7e-05 22.2 0.7 8.7 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226205|ref|NP_632127.1| - 1.3e-12 46.5 24.1 0.038 13.7 0.3 8.3 10 0 0 10 10 9 5 Tetratricopeptide repeat TPR_15 PF13429.1 gi|21226205|ref|NP_632127.1| - 7.4e-10 38.3 5.9 0.00043 19.4 0.2 3.5 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_4 PF07721.9 gi|21226205|ref|NP_632127.1| - 8.5e-10 38.1 7.0 0.35 11.4 0.3 6.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226205|ref|NP_632127.1| - 6.5e-08 32.3 11.5 0.024 14.4 0.1 4.9 2 1 2 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21226205|ref|NP_632127.1| - 2.6e-05 24.2 17.4 0.028 14.5 0.1 4.6 2 1 4 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|21226205|ref|NP_632127.1| - 4.3e-05 23.2 25.9 2.1 8.3 0.7 7.4 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226205|ref|NP_632127.1| - 0.0001 22.4 15.2 9.3 6.9 0.0 7.7 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_20 PF14561.1 gi|21226205|ref|NP_632127.1| - 0.00023 21.2 5.0 0.1 12.7 0.1 3.6 1 1 1 3 3 3 2 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21226205|ref|NP_632127.1| - 0.00027 20.1 0.6 0.76 9.0 0.0 2.9 3 0 0 3 3 2 2 SHNi-TPR Coatomer_E PF04733.9 gi|21226205|ref|NP_632127.1| - 0.0037 16.4 4.7 0.019 14.1 0.0 3.4 4 1 1 5 5 5 1 Coatomer epsilon subunit DUF627 PF04781.7 gi|21226205|ref|NP_632127.1| - 0.016 14.7 0.4 5.2 6.7 0.1 4.1 2 2 2 4 4 4 0 Protein of unknown function (DUF627) NARP1 PF12569.3 gi|21226205|ref|NP_632127.1| - 0.028 13.1 10.2 1.4 7.5 0.2 4.1 1 1 2 4 4 4 0 NMDA receptor-regulated protein 1 TPPII_N PF12583.3 gi|21226205|ref|NP_632127.1| - 0.03 14.4 0.9 0.61 10.2 0.1 2.9 1 1 0 2 2 2 0 Tripeptidyl peptidase II N terminal BTAD PF03704.12 gi|21226205|ref|NP_632127.1| - 0.18 12.1 15.2 2.9 8.1 1.2 4.3 2 2 3 5 5 5 0 Bacterial transcriptional activator domain TPR_21 PF09976.4 gi|21226205|ref|NP_632127.1| - 0.3 11.0 5.8 57 3.6 0.2 4.4 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21226205|ref|NP_632127.1| - 2.6 7.9 0.0 2.6 7.9 0.0 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat SpoVA PF03862.8 gi|21226207|ref|NP_632129.1| - 0.0016 18.5 4.0 0.0019 18.2 2.7 1.1 1 0 0 1 1 1 1 SpoVA protein Gly-zipper_YMGG PF13441.1 gi|21226207|ref|NP_632129.1| - 0.016 14.6 5.7 0.16 11.5 0.1 2.1 2 0 0 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.1 gi|21226207|ref|NP_632129.1| - 0.092 12.4 7.9 0.17 11.5 5.5 1.5 1 1 0 1 1 1 0 Glycine zipper Bacteriocin_IIc PF10439.4 gi|21226207|ref|NP_632129.1| - 0.1 12.7 7.0 0.14 12.2 4.8 1.2 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide BPD_transp_2 PF02653.11 gi|21226207|ref|NP_632129.1| - 0.17 10.8 6.8 0.19 10.6 4.7 1.1 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component Gly-zipper_OmpA PF13436.1 gi|21226207|ref|NP_632129.1| - 0.49 10.0 8.2 4.8 6.8 5.7 2.0 1 1 0 1 1 1 0 Glycine-zipper containing OmpA-like membrane domain DUF456 PF04306.8 gi|21226207|ref|NP_632129.1| - 0.88 9.5 6.6 1.1 9.2 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Rick_17kDa_Anti PF05433.10 gi|21226207|ref|NP_632129.1| - 1.8 8.2 8.6 2.1 8.0 0.4 2.2 2 0 0 2 2 2 0 Glycine zipper 2TM domain Romo1 PF10247.4 gi|21226207|ref|NP_632129.1| - 2.6 8.3 15.1 1.4 9.1 4.4 2.1 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 DUF2613 PF11021.3 gi|21226207|ref|NP_632129.1| - 9.8 5.9 11.1 0.55 9.9 2.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2613) FxsA PF04186.8 gi|21226208|ref|NP_632130.1| - 8.1e-38 128.7 5.6 1e-37 128.4 3.9 1.0 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein LrgB PF04172.11 gi|21226209|ref|NP_632131.1| - 9.2e-80 266.8 14.3 1.1e-79 266.6 9.9 1.0 1 0 0 1 1 1 1 LrgB-like family CbtA PF09490.5 gi|21226209|ref|NP_632131.1| - 0.061 12.6 0.2 0.061 12.6 0.2 1.9 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtA) LrgA PF03788.9 gi|21226210|ref|NP_632132.1| - 2.5e-28 97.5 6.3 3e-28 97.3 4.4 1.1 1 0 0 1 1 1 1 LrgA family Aminotran_5 PF00266.14 gi|21226211|ref|NP_632133.1| - 4.1e-86 289.0 0.0 5.2e-86 288.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|21226211|ref|NP_632133.1| - 1.8e-07 30.6 0.0 2.5e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|21226211|ref|NP_632133.1| - 2.4e-05 23.5 0.0 3.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.14 gi|21226211|ref|NP_632133.1| - 0.0033 15.9 0.0 0.005 15.3 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.11 gi|21226212|ref|NP_632134.1| - 9.5e-44 148.3 0.1 1.1e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.12 gi|21226212|ref|NP_632134.1| - 0.0066 16.3 0.2 0.011 15.7 0.1 1.4 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Phos_pyr_kin PF08543.7 gi|21226212|ref|NP_632134.1| - 0.096 11.8 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase RimK PF08443.6 gi|21226213|ref|NP_632135.1| - 5.9e-29 100.9 0.0 8.8e-27 93.8 0.0 2.5 2 1 0 2 2 2 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|21226213|ref|NP_632135.1| - 1.7e-16 59.8 0.0 3.4e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_4 PF13535.1 gi|21226213|ref|NP_632135.1| - 9.9e-11 41.7 0.0 1.9e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21226213|ref|NP_632135.1| - 1.4e-09 37.1 0.0 4.2e-09 35.5 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_YheCD PF14398.1 gi|21226213|ref|NP_632135.1| - 2.9e-06 26.2 0.0 7.3e-05 21.6 0.0 2.2 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATP-grasp_3 PF02655.9 gi|21226213|ref|NP_632135.1| - 2.6e-05 24.1 0.1 4.3e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.17 gi|21226213|ref|NP_632135.1| - 0.015 14.6 0.0 0.061 12.6 0.0 1.9 1 1 1 2 2 2 0 ATP-grasp domain ATP-grasp_5 PF13549.1 gi|21226213|ref|NP_632135.1| - 0.033 13.4 0.1 0.13 11.4 0.1 1.9 1 1 1 2 2 2 0 ATP-grasp domain PTH2 PF01981.11 gi|21226214|ref|NP_632136.1| - 1.5e-42 143.9 0.1 1.7e-42 143.7 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DUF4353 PF14262.1 gi|21226214|ref|NP_632136.1| - 0.026 13.7 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4353) Bacillus_HBL PF05791.6 gi|21226214|ref|NP_632136.1| - 0.029 13.7 0.0 1.7 7.9 0.0 2.0 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) SAP PF02037.22 gi|21226214|ref|NP_632136.1| - 0.03 13.8 0.5 1.2 8.6 0.1 2.6 2 0 0 2 2 2 0 SAP domain Transglut_core PF01841.14 gi|21226215|ref|NP_632137.1| - 2.2e-06 27.8 0.0 4.3e-06 26.9 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily FTZ PF03867.9 gi|21226215|ref|NP_632137.1| - 0.061 12.5 0.3 0.1 11.8 0.2 1.3 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region TruD PF01142.13 gi|21226216|ref|NP_632138.1| - 1.9e-113 378.9 0.0 2.1e-113 378.8 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) MatE PF01554.13 gi|21226217|ref|NP_632139.1| - 4.9e-29 101.0 41.8 5.4e-18 65.1 9.8 2.5 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.1 gi|21226217|ref|NP_632139.1| - 3.4e-10 39.9 30.0 2.5e-09 37.0 11.0 4.5 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.17 gi|21226218|ref|NP_632140.1| - 2e-12 46.5 0.0 4.3e-12 45.5 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|21226218|ref|NP_632140.1| - 1.1e-11 44.8 0.0 1.8e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21226218|ref|NP_632140.1| - 1.7e-10 40.3 0.0 2.3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.14 gi|21226218|ref|NP_632140.1| - 5.8e-09 35.7 0.1 1.2e-08 34.7 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|21226218|ref|NP_632140.1| - 2.3e-05 23.9 0.1 5.9e-05 22.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|21226218|ref|NP_632140.1| - 0.00043 19.8 0.0 0.00063 19.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|21226218|ref|NP_632140.1| - 0.001 18.4 0.0 0.0021 17.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|21226218|ref|NP_632140.1| - 0.0019 18.2 0.0 0.004 17.2 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator DUF387 PF04079.11 gi|21226218|ref|NP_632140.1| - 0.0071 15.7 0.0 0.012 14.9 0.0 1.6 1 1 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_Crp_2 PF13545.1 gi|21226218|ref|NP_632140.1| - 0.013 15.2 0.0 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.15 gi|21226218|ref|NP_632140.1| - 0.014 15.0 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21226218|ref|NP_632140.1| - 0.022 14.5 0.0 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.7 gi|21226218|ref|NP_632140.1| - 0.039 13.5 0.4 0.18 11.4 0.0 2.3 4 0 0 4 4 4 0 HTH DNA binding domain HTH_45 PF14947.1 gi|21226218|ref|NP_632140.1| - 0.057 13.2 0.0 0.12 12.2 0.0 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix FeoC PF09012.5 gi|21226218|ref|NP_632140.1| - 0.061 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator DUF4013 PF13197.1 gi|21226219|ref|NP_632141.1| - 5.4e-19 68.1 20.0 3.1e-18 65.6 13.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF4013) AtpR PF12966.2 gi|21226219|ref|NP_632141.1| - 1.1 9.4 7.1 0.095 12.8 1.2 1.9 2 0 0 2 2 2 0 N-ATPase, AtpR subunit DUF1673 PF07895.6 gi|21226219|ref|NP_632141.1| - 2.5 7.5 9.3 3.6 7.0 6.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) CTP_synth_N PF06418.9 gi|21226220|ref|NP_632142.1| - 1.1e-127 424.7 2.0 1.7e-127 424.2 1.4 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|21226220|ref|NP_632142.1| - 2.8e-51 173.7 0.0 5.3e-51 172.8 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.18 gi|21226220|ref|NP_632142.1| - 3.8e-09 36.2 0.1 7.4e-09 35.2 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.8 gi|21226220|ref|NP_632142.1| - 1.3e-08 34.5 0.0 6.6e-08 32.2 0.0 2.0 2 0 0 2 2 2 1 Peptidase C26 ArgK PF03308.11 gi|21226220|ref|NP_632142.1| - 0.039 12.7 0.3 0.11 11.2 0.2 1.7 1 0 0 1 1 1 0 ArgK protein Trm112p PF03966.11 gi|21226222|ref|NP_632144.1| - 2.5e-11 43.7 0.9 3.9e-11 43.1 0.6 1.3 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.8 gi|21226222|ref|NP_632144.1| - 0.0041 16.7 0.0 0.0044 16.6 0.0 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Prim_Zn_Ribbon PF08273.7 gi|21226222|ref|NP_632144.1| - 0.0043 17.1 0.2 0.0074 16.3 0.1 1.4 1 1 0 1 1 1 1 Zinc-binding domain of primase-helicase Cys_rich_KTR PF14205.1 gi|21226222|ref|NP_632144.1| - 0.0047 16.3 1.7 0.009 15.4 1.2 1.5 1 1 0 1 1 1 1 Cysteine-rich KTR Lar_restr_allev PF14354.1 gi|21226222|ref|NP_632144.1| - 0.01 16.1 1.4 0.019 15.2 1.0 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.7 gi|21226222|ref|NP_632144.1| - 0.017 14.4 1.2 2.2 7.6 0.1 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding C1_4 PF07975.7 gi|21226222|ref|NP_632144.1| - 0.037 14.0 0.3 0.081 12.9 0.2 1.5 1 1 0 1 1 1 0 TFIIH C1-like domain zf-RING_4 PF14570.1 gi|21226222|ref|NP_632144.1| - 0.039 13.5 0.6 0.71 9.5 0.0 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-TFIIB PF13453.1 gi|21226222|ref|NP_632144.1| - 0.045 12.9 1.0 2.4 7.4 0.0 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-Di19 PF05605.7 gi|21226222|ref|NP_632144.1| - 0.067 13.3 3.2 4.7 7.4 0.1 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_UBOX PF13445.1 gi|21226222|ref|NP_632144.1| - 0.089 12.5 1.9 0.92 9.2 0.1 2.1 2 0 0 2 2 2 0 RING-type zinc-finger RRN7 PF11781.3 gi|21226222|ref|NP_632144.1| - 0.1 12.1 0.7 6.5 6.3 0.0 2.4 2 1 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 DRP PF06044.7 gi|21226222|ref|NP_632144.1| - 0.11 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 Dam-replacing family zf-C3HC4_3 PF13920.1 gi|21226222|ref|NP_632144.1| - 0.12 12.1 2.4 3.9 7.2 1.7 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CK_II_beta PF01214.13 gi|21226222|ref|NP_632144.1| - 0.16 11.4 0.3 0.17 11.3 0.2 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit NADH-G_4Fe-4S_3 PF10588.4 gi|21226222|ref|NP_632144.1| - 0.24 10.6 2.0 2.1 7.6 0.1 2.1 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Auto_anti-p27 PF06677.7 gi|21226222|ref|NP_632144.1| - 0.47 10.2 3.5 1.7 8.4 0.2 2.1 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF2387 PF09526.5 gi|21226222|ref|NP_632144.1| - 0.51 10.2 2.3 3.9 7.4 1.5 1.9 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Rad50_zn_hook PF04423.9 gi|21226222|ref|NP_632144.1| - 1.2 8.6 7.0 1.5 8.3 0.4 2.3 1 1 1 2 2 2 0 Rad50 zinc hook motif zf-RING_5 PF14634.1 gi|21226222|ref|NP_632144.1| - 3.4 7.4 5.2 8.3 6.2 0.2 2.1 1 1 0 2 2 2 0 zinc-RING finger domain Prismane PF03063.15 gi|21226223|ref|NP_632145.1| - 3.4e-177 589.9 2.2 4e-177 589.7 1.5 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_11 PF13247.1 gi|21226224|ref|NP_632146.1| - 1.7e-19 69.5 14.3 9.3e-11 41.4 4.2 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21226224|ref|NP_632146.1| - 4.9e-12 45.4 20.4 3.8e-06 26.5 3.5 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226224|ref|NP_632146.1| - 2.7e-11 43.6 28.5 9.8e-06 25.8 8.4 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226224|ref|NP_632146.1| - 6.2e-11 41.6 32.8 0.0078 16.0 2.1 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21226224|ref|NP_632146.1| - 4.5e-10 39.6 26.7 8.4e-05 22.7 6.8 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21226224|ref|NP_632146.1| - 1.2e-07 31.0 37.8 0.0067 15.9 2.6 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226224|ref|NP_632146.1| - 1.5e-06 28.1 24.1 0.0012 18.7 6.5 2.5 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226224|ref|NP_632146.1| - 0.00024 20.8 38.1 0.00024 20.8 2.3 4.6 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21226224|ref|NP_632146.1| - 0.00086 19.4 38.1 0.044 14.1 2.9 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21226224|ref|NP_632146.1| - 0.0011 19.3 4.5 0.0011 19.3 3.1 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21226224|ref|NP_632146.1| - 0.012 15.8 29.3 1.1 9.6 7.8 3.6 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226224|ref|NP_632146.1| - 0.021 15.5 31.6 4.3 8.1 1.0 4.6 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21226224|ref|NP_632146.1| - 0.71 9.7 34.3 1.4 8.8 2.2 4.1 2 2 2 4 4 4 0 4Fe-4S dicluster domain GF_recep_IV PF14843.1 gi|21226224|ref|NP_632146.1| - 1.1 8.8 25.3 18 4.9 0.2 3.1 2 1 0 2 2 2 0 Growth factor receptor domain IV Fer4_20 PF14691.1 gi|21226224|ref|NP_632146.1| - 9.1 5.9 23.5 2.5 7.7 0.1 3.6 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Usp PF00582.21 gi|21226225|ref|NP_632147.1| - 2e-37 128.5 0.7 2.2e-37 128.3 0.5 1.0 1 0 0 1 1 1 1 Universal stress protein family GARS_N PF02844.10 gi|21226225|ref|NP_632147.1| - 0.054 13.9 0.1 0.11 12.9 0.0 1.7 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain Gate PF07670.9 gi|21226226|ref|NP_632148.1| - 2.9e-11 43.2 20.4 2.9e-08 33.5 1.3 3.0 2 2 1 3 3 3 2 Nucleoside recognition Usp PF00582.21 gi|21226227|ref|NP_632149.1| - 3e-39 134.4 1.3 3.4e-39 134.2 0.9 1.0 1 0 0 1 1 1 1 Universal stress protein family SIMPL PF04402.9 gi|21226227|ref|NP_632149.1| - 0.0097 15.7 0.5 0.023 14.5 0.3 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF541) FR47 PF08445.5 gi|21226227|ref|NP_632149.1| - 0.051 13.3 0.1 0.53 10.0 0.0 2.3 2 1 0 2 2 2 0 FR47-like protein PmbA_TldD PF01523.11 gi|21226228|ref|NP_632150.1| - 6.8e-67 225.8 2.5 1.1e-66 225.0 1.7 1.4 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.11 gi|21226229|ref|NP_632151.1| - 2.7e-72 243.5 0.7 3.8e-72 243.0 0.5 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Lon_C PF05362.8 gi|21226230|ref|NP_632152.1| - 1.5e-32 112.6 5.8 2.7e-32 111.7 4.0 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.1 gi|21226230|ref|NP_632152.1| - 6.2e-28 97.7 0.1 3.1e-19 69.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|21226230|ref|NP_632152.1| - 1.2e-16 60.5 0.2 5.9e-10 38.6 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|21226230|ref|NP_632152.1| - 2.9e-15 56.1 0.0 9e-09 35.0 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.1 gi|21226230|ref|NP_632152.1| - 1.4e-11 43.9 0.6 2.9e-11 42.9 0.4 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|21226230|ref|NP_632152.1| - 1.1e-10 41.3 0.0 0.00016 21.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|21226230|ref|NP_632152.1| - 1.3e-07 30.7 1.0 0.081 11.7 0.0 3.7 4 0 0 4 4 4 2 MCM2/3/5 family AAA PF00004.24 gi|21226230|ref|NP_632152.1| - 2e-07 31.2 0.0 0.0029 17.7 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|21226230|ref|NP_632152.1| - 1.6e-05 25.0 0.0 0.0052 16.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|21226230|ref|NP_632152.1| - 5.3e-05 23.5 0.0 0.00016 21.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21226230|ref|NP_632152.1| - 8e-05 22.3 0.0 0.00024 20.7 0.0 1.9 1 0 0 1 1 1 1 Part of AAA domain Sigma54_activ_2 PF14532.1 gi|21226230|ref|NP_632152.1| - 9.6e-05 22.4 0.0 0.66 10.0 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_3 PF07726.6 gi|21226230|ref|NP_632152.1| - 0.0003 20.3 0.0 0.99 9.0 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|21226230|ref|NP_632152.1| - 0.00036 19.6 0.0 0.065 12.2 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|21226230|ref|NP_632152.1| - 0.00096 19.1 0.1 0.047 13.6 0.0 2.7 3 0 0 3 3 3 1 AAA ATPase domain T2SE PF00437.15 gi|21226230|ref|NP_632152.1| - 0.0012 17.8 0.0 0.0066 15.3 0.0 2.1 2 0 0 2 2 2 1 Type II/IV secretion system protein PhoH PF02562.11 gi|21226230|ref|NP_632152.1| - 0.0024 17.1 0.0 0.0072 15.5 0.0 1.8 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.1 gi|21226230|ref|NP_632152.1| - 0.0031 17.0 0.0 0.0076 15.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21226230|ref|NP_632152.1| - 0.0058 17.4 0.0 0.026 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Parvo_NS1 PF01057.12 gi|21226230|ref|NP_632152.1| - 0.009 14.9 0.0 0.016 14.1 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 TrwB_AAD_bind PF10412.4 gi|21226230|ref|NP_632152.1| - 0.0097 14.5 0.0 0.017 13.7 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.1 gi|21226230|ref|NP_632152.1| - 0.017 14.9 0.0 0.058 13.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|21226230|ref|NP_632152.1| - 0.022 14.1 0.0 0.069 12.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF815 PF05673.8 gi|21226230|ref|NP_632152.1| - 0.034 13.0 0.0 0.066 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.1 gi|21226230|ref|NP_632152.1| - 0.045 13.7 0.0 0.19 11.7 0.0 2.1 2 1 1 3 3 1 0 AAA domain AAA_2 PF07724.9 gi|21226230|ref|NP_632152.1| - 0.06 13.2 1.0 11 5.9 0.0 3.0 3 1 0 3 3 2 0 AAA domain (Cdc48 subfamily) ABC_tran PF00005.22 gi|21226230|ref|NP_632152.1| - 0.065 13.5 0.0 0.25 11.6 0.0 2.0 2 0 0 2 2 1 0 ABC transporter DUF2075 PF09848.4 gi|21226230|ref|NP_632152.1| - 0.15 11.0 0.0 0.28 10.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TPR_12 PF13424.1 gi|21226231|ref|NP_632153.1| - 3.7e-17 62.0 18.9 2.9e-09 36.7 0.3 4.0 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226231|ref|NP_632153.1| - 4.2e-15 55.1 17.5 2.7e-08 33.3 2.1 4.3 1 1 3 4 4 4 3 TPR repeat TPR_2 PF07719.12 gi|21226231|ref|NP_632153.1| - 5.3e-15 54.0 15.6 3.5e-05 23.3 0.8 6.0 5 1 0 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226231|ref|NP_632153.1| - 2e-12 46.5 4.4 0.0019 18.6 0.1 6.0 3 2 2 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226231|ref|NP_632153.1| - 1.2e-11 43.6 16.8 3.8e-05 23.1 1.7 5.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226231|ref|NP_632153.1| - 2.2e-10 40.9 8.7 0.00021 21.8 0.3 5.3 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21226231|ref|NP_632153.1| - 4.6e-10 39.0 0.9 0.0032 17.3 0.0 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226231|ref|NP_632153.1| - 7.7e-10 38.9 21.9 0.033 14.5 2.1 5.9 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226231|ref|NP_632153.1| - 4.2e-07 29.2 23.6 0.013 15.2 1.0 5.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226231|ref|NP_632153.1| - 1.3e-06 28.5 9.7 1.1 9.8 0.4 5.9 5 2 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226231|ref|NP_632153.1| - 9e-06 25.1 8.4 0.075 12.8 0.1 5.3 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226231|ref|NP_632153.1| - 0.00014 21.7 13.5 0.02 15.0 0.1 6.3 5 4 1 6 6 6 2 Tetratricopeptide repeat PTS_IIA PF02255.11 gi|21226231|ref|NP_632153.1| - 0.0008 19.2 10.4 1.9 8.4 0.0 4.1 3 2 2 5 5 5 2 PTS system, Lactose/Cellobiose specific IIA subunit TPR_21 PF09976.4 gi|21226231|ref|NP_632153.1| - 0.00081 19.3 1.5 0.00081 19.3 1.1 3.7 3 1 1 4 4 4 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21226231|ref|NP_632153.1| - 0.00084 19.1 8.0 3.3 7.6 0.1 4.9 4 1 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat TOM20_plant PF06552.7 gi|21226231|ref|NP_632153.1| - 0.0019 17.8 6.4 0.69 9.4 0.2 3.8 1 1 2 3 3 3 1 Plant specific mitochondrial import receptor subunit TOM20 Arfaptin PF06456.8 gi|21226231|ref|NP_632153.1| - 0.002 17.5 2.1 0.018 14.3 0.3 2.2 2 0 0 2 2 2 1 Arfaptin-like domain SPO22 PF08631.5 gi|21226231|ref|NP_632153.1| - 0.0026 16.9 5.4 0.0058 15.7 0.1 2.4 2 1 0 2 2 2 1 Meiosis protein SPO22/ZIP4 like Apc3 PF12895.2 gi|21226231|ref|NP_632153.1| - 0.0032 17.5 13.7 0.2 11.8 1.6 4.6 3 2 2 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 Ribosomal_S7 PF00177.16 gi|21226231|ref|NP_632153.1| - 0.074 12.6 0.5 1.2 8.6 0.0 2.7 3 0 0 3 3 3 0 Ribosomal protein S7p/S5e YfdX PF10938.3 gi|21226231|ref|NP_632153.1| - 0.076 12.6 8.3 0.094 12.3 0.2 3.6 4 0 0 4 4 4 0 YfdX protein Catalase-rel PF06628.7 gi|21226231|ref|NP_632153.1| - 0.089 12.6 0.1 0.19 11.6 0.1 1.6 1 0 0 1 1 1 0 Catalase-related immune-responsive TPR_9 PF13371.1 gi|21226231|ref|NP_632153.1| - 0.092 12.6 2.4 3.9 7.3 0.1 3.3 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_5 PF12688.2 gi|21226231|ref|NP_632153.1| - 0.097 12.7 0.1 0.097 12.7 0.1 2.9 3 1 1 4 4 3 0 Tetratrico peptide repeat DUF4359 PF14271.1 gi|21226231|ref|NP_632153.1| - 0.14 12.5 3.2 12 6.3 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4359) TPR_3 PF07720.7 gi|21226231|ref|NP_632153.1| - 0.19 11.5 10.8 1.4 8.7 0.2 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat PPR_1 PF12854.2 gi|21226231|ref|NP_632153.1| - 0.31 10.5 1.9 6.9 6.2 0.1 3.1 3 0 0 3 3 3 0 PPR repeat SHNi-TPR PF10516.4 gi|21226231|ref|NP_632153.1| - 0.41 9.9 13.5 2.7 7.3 0.7 3.9 4 0 0 4 4 4 0 SHNi-TPR MIT PF04212.13 gi|21226231|ref|NP_632153.1| - 0.83 9.5 21.0 0.24 11.3 0.7 4.8 4 1 1 5 5 5 0 MIT (microtubule interacting and transport) domain DUF572 PF04502.8 gi|21226231|ref|NP_632153.1| - 2 7.5 8.7 1.4 8.0 3.3 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF572) Sel1 PF08238.7 gi|21226231|ref|NP_632153.1| - 2.8 8.7 5.3 7.1 7.4 0.6 3.5 4 0 0 4 4 3 0 Sel1 repeat PPR PF01535.15 gi|21226231|ref|NP_632153.1| - 3.3 7.9 8.8 26 5.0 0.0 4.9 6 0 0 6 6 5 0 PPR repeat RAMP PF04901.8 gi|21226232|ref|NP_632154.1| - 0.1 12.3 0.0 0.18 11.5 0.0 1.5 1 1 0 1 1 1 0 Receptor activity modifying family DUF4191 PF13829.1 gi|21226232|ref|NP_632154.1| - 0.2 10.7 1.9 0.24 10.4 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1049 PF06305.6 gi|21226232|ref|NP_632154.1| - 4.3 6.8 7.1 1.3 8.5 1.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1049) TPR_12 PF13424.1 gi|21226233|ref|NP_632155.1| - 1.4e-25 89.0 14.5 2e-11 43.6 0.5 4.9 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226233|ref|NP_632155.1| - 2.6e-24 83.7 5.6 2.2e-06 26.9 0.2 6.3 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226233|ref|NP_632155.1| - 2.2e-20 70.8 5.9 5.5e-06 25.8 0.2 6.6 5 2 2 7 7 7 6 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21226233|ref|NP_632155.1| - 2.7e-19 68.4 0.3 1.9e-07 30.7 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226233|ref|NP_632155.1| - 3.6e-18 64.9 14.4 5.5e-08 32.3 2.3 3.5 2 1 1 3 3 3 3 TPR repeat TPR_8 PF13181.1 gi|21226233|ref|NP_632155.1| - 8.7e-16 56.4 11.7 0.0003 20.3 0.4 6.2 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226233|ref|NP_632155.1| - 1.5e-12 46.3 3.2 0.00045 19.8 0.1 5.7 5 2 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226233|ref|NP_632155.1| - 4.2e-10 39.3 0.9 0.03 14.9 0.0 6.1 4 2 3 7 7 5 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226233|ref|NP_632155.1| - 4.9e-09 36.6 0.0 0.078 13.6 0.0 4.2 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226233|ref|NP_632155.1| - 4.9e-09 36.0 2.2 0.00036 20.7 0.0 6.2 5 2 0 5 5 5 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226233|ref|NP_632155.1| - 3.5e-07 29.9 11.1 0.016 15.3 0.0 5.9 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226233|ref|NP_632155.1| - 1.4e-06 28.5 11.0 0.058 13.7 1.6 4.4 2 1 1 3 3 3 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21226233|ref|NP_632155.1| - 2e-05 24.5 5.0 0.28 11.3 0.7 3.7 2 1 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_21 PF09976.4 gi|21226233|ref|NP_632155.1| - 5.1e-05 23.2 0.8 0.34 10.8 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat MIT PF04212.13 gi|21226233|ref|NP_632155.1| - 9.8e-05 22.1 14.4 0.013 15.4 0.4 4.9 5 0 0 5 5 5 2 MIT (microtubule interacting and transport) domain TPR_9 PF13371.1 gi|21226233|ref|NP_632155.1| - 0.00068 19.4 0.3 3.3 7.6 0.0 3.6 3 2 1 4 4 4 2 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21226233|ref|NP_632155.1| - 0.0014 18.4 0.8 1.7 8.5 0.2 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TOM20_plant PF06552.7 gi|21226233|ref|NP_632155.1| - 0.0021 17.7 1.7 0.68 9.4 0.1 3.8 1 1 4 5 5 5 1 Plant specific mitochondrial import receptor subunit TOM20 Fis1_TPR_C PF14853.1 gi|21226233|ref|NP_632155.1| - 0.0035 17.1 4.0 4.6 7.2 0.0 3.9 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21226233|ref|NP_632155.1| - 0.023 13.9 4.9 0.26 10.5 0.4 3.5 3 0 0 3 3 3 0 SHNi-TPR SNAP PF14938.1 gi|21226233|ref|NP_632155.1| - 0.024 13.8 4.3 0.042 12.9 0.7 2.2 1 1 0 2 2 2 0 Soluble NSF attachment protein, SNAP TPR_4 PF07721.9 gi|21226233|ref|NP_632155.1| - 0.034 14.5 0.0 9.5 6.9 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|21226233|ref|NP_632155.1| - 0.04 13.7 1.7 24 4.7 0.0 3.5 2 2 1 3 3 3 0 Domain of Unknown Function (DUF3856) RPN7 PF10602.4 gi|21226233|ref|NP_632155.1| - 0.094 12.0 4.8 2.2 7.6 0.1 3.0 1 1 2 3 3 3 0 26S proteasome subunit RPN7 Aida_N PF08910.5 gi|21226233|ref|NP_632155.1| - 0.14 12.3 1.2 1.3 9.3 0.3 2.4 2 1 0 2 2 2 0 Aida N-terminus Apc5 PF12862.2 gi|21226233|ref|NP_632155.1| - 0.41 10.5 3.8 0.85 9.5 0.2 3.0 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 YfdX PF10938.3 gi|21226233|ref|NP_632155.1| - 0.49 10.0 7.0 0.88 9.2 0.2 3.0 2 1 0 3 3 3 0 YfdX protein GST_C PF00043.20 gi|21226233|ref|NP_632155.1| - 0.61 10.1 6.7 0.99 9.4 0.4 3.1 2 1 1 3 3 3 0 Glutathione S-transferase, C-terminal domain PTS_IIA PF02255.11 gi|21226233|ref|NP_632155.1| - 2.1 8.2 5.7 7.4 6.5 0.6 2.7 3 1 0 3 3 2 0 PTS system, Lactose/Cellobiose specific IIA subunit PALP PF00291.20 gi|21226235|ref|NP_632157.1| - 1.5e-28 99.9 0.0 1.9e-28 99.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.16 gi|21226236|ref|NP_632158.1| - 1.7e-19 69.8 0.1 6.3e-18 64.8 0.0 2.5 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|21226236|ref|NP_632158.1| - 6.5e-11 42.0 0.0 1.2e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|21226236|ref|NP_632158.1| - 0.087 11.7 0.8 3.8 6.3 0.1 2.4 2 1 0 3 3 3 0 1-deoxy-D-xylulose-5-phosphate synthase DUF39 PF01837.11 gi|21226237|ref|NP_632159.1| - 5.7e-107 357.2 0.0 6.5e-107 357.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF39 Fer4 PF00037.22 gi|21226237|ref|NP_632159.1| - 1.2e-05 24.7 14.5 0.0027 17.2 0.4 3.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226237|ref|NP_632159.1| - 2.4e-05 24.0 10.3 2.4e-05 24.0 7.2 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226237|ref|NP_632159.1| - 5.3e-05 23.5 13.4 7e-05 23.1 8.0 2.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226237|ref|NP_632159.1| - 0.00022 21.4 12.2 0.00031 20.9 7.7 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226237|ref|NP_632159.1| - 0.0018 18.0 15.5 0.014 15.3 2.3 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226237|ref|NP_632159.1| - 0.014 15.2 4.4 0.014 15.2 3.1 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21226237|ref|NP_632159.1| - 0.048 14.4 10.7 1.1 10.0 1.7 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21226237|ref|NP_632159.1| - 0.29 11.0 13.1 0.33 10.8 7.0 2.5 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226237|ref|NP_632159.1| - 0.31 11.1 12.5 0.42 10.6 7.4 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226237|ref|NP_632159.1| - 0.61 10.4 11.8 22 5.4 1.8 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226237|ref|NP_632159.1| - 1.9 8.9 8.6 7.2 7.1 0.6 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21226237|ref|NP_632159.1| - 2.3 8.8 15.4 0.9 10.0 1.3 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Lactamase_B PF00753.22 gi|21226238|ref|NP_632160.1| - 1.5e-15 57.3 0.2 2e-15 56.9 0.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21226238|ref|NP_632160.1| - 9.4e-07 28.5 0.1 1.2e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF1287 PF06940.6 gi|21226238|ref|NP_632160.1| - 0.023 14.0 0.2 3.2 7.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1287) ProRS-C_1 PF09180.6 gi|21226238|ref|NP_632160.1| - 0.07 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal ThiS PF02597.15 gi|21226239|ref|NP_632161.1| - 0.00019 21.7 1.5 0.00027 21.2 1.0 1.3 1 1 0 1 1 1 1 ThiS family DUF3712 PF12505.3 gi|21226239|ref|NP_632161.1| - 0.13 12.2 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3712) HTH_34 PF13601.1 gi|21226240|ref|NP_632162.1| - 0.0046 16.9 0.0 0.0096 15.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain DSPc PF00782.15 gi|21226240|ref|NP_632162.1| - 0.022 14.3 0.7 0.14 11.7 0.1 2.1 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.14 gi|21226240|ref|NP_632162.1| - 0.029 14.0 0.2 0.063 12.9 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cytochrom_C_asm PF01578.15 gi|21226241|ref|NP_632163.1| - 1.6e-25 89.9 28.4 1.6e-25 89.9 19.7 2.5 2 1 1 3 3 3 2 Cytochrome C assembly protein ResB PF05140.9 gi|21226242|ref|NP_632164.1| - 3.4e-07 29.1 0.4 0.00043 18.9 0.0 2.1 2 0 0 2 2 2 2 ResB-like family DUF46 PF01864.12 gi|21226243|ref|NP_632165.1| - 5.6e-48 163.1 1.6 6.3e-48 162.9 1.1 1.0 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|21226243|ref|NP_632165.1| - 1.3e-08 34.7 3.1 1.3e-08 34.7 2.1 1.8 1 1 1 2 2 2 1 Cytidylyltransferase family Pribosyltran PF00156.22 gi|21226244|ref|NP_632166.1| - 1.3e-13 50.7 2.0 5.6e-13 48.7 1.4 1.9 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|21226244|ref|NP_632166.1| - 0.1 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase CMD PF02627.15 gi|21226245|ref|NP_632167.1| - 1.9e-14 53.2 0.1 2.1e-14 53.1 0.1 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family GARS_A PF01071.14 gi|21226246|ref|NP_632168.1| - 4.8e-56 189.4 0.0 9.6e-56 188.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|21226246|ref|NP_632168.1| - 9.8e-31 106.1 0.3 1.9e-30 105.2 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|21226246|ref|NP_632168.1| - 2.7e-20 72.3 0.5 7.2e-20 70.9 0.3 1.8 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|21226246|ref|NP_632168.1| - 7.9e-14 51.8 0.0 2.1e-13 50.4 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21226246|ref|NP_632168.1| - 1.3e-05 24.1 0.0 4.2e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|21226246|ref|NP_632168.1| - 0.0014 18.5 0.0 0.0026 17.6 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|21226246|ref|NP_632168.1| - 0.075 12.3 0.0 0.18 11.0 0.0 1.7 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain GFO_IDH_MocA PF01408.17 gi|21226246|ref|NP_632168.1| - 0.089 13.3 0.1 0.39 11.2 0.0 2.2 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold GSH-S_ATP PF02955.11 gi|21226246|ref|NP_632168.1| - 0.094 11.8 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain OTCace PF00185.19 gi|161485684|ref|NP_632169.2| - 3.5e-56 189.4 0.0 4.9e-56 188.9 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|161485684|ref|NP_632169.2| - 2.2e-50 170.0 0.0 3e-50 169.5 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TrmB PF01978.14 gi|21226248|ref|NP_632170.1| - 1.6e-21 75.7 0.3 3.2e-21 74.8 0.2 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|21226248|ref|NP_632170.1| - 0.00054 18.9 0.2 0.00081 18.4 0.1 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB PLDc_2 PF13091.1 gi|21226248|ref|NP_632170.1| - 0.012 15.3 0.2 0.023 14.4 0.1 1.4 1 0 0 1 1 1 0 PLD-like domain Penicillinase_R PF03965.11 gi|21226248|ref|NP_632170.1| - 0.024 14.6 0.2 0.15 12.1 0.1 2.4 3 1 0 3 3 3 0 Penicillinase repressor PadR PF03551.9 gi|21226248|ref|NP_632170.1| - 0.068 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family GntR PF00392.16 gi|21226248|ref|NP_632170.1| - 0.12 11.8 0.0 0.27 10.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family FMN_red PF03358.10 gi|21226249|ref|NP_632171.1| - 1.1e-24 86.6 0.0 1.6e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21226249|ref|NP_632171.1| - 1.4e-12 47.5 0.0 1.9e-12 47.1 0.0 1.3 1 1 0 1 1 1 1 Flavodoxin-like fold DUF169 PF02596.10 gi|21226250|ref|NP_632172.1| - 2.2e-32 112.2 0.0 2.5e-32 112.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 adh_short PF00106.20 gi|21226251|ref|NP_632173.1| - 3.7e-12 46.4 0.0 4.2e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.5 gi|21226251|ref|NP_632173.1| - 7.8e-07 28.9 0.0 9.3e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 KR domain F420_oxidored PF03807.12 gi|21226251|ref|NP_632173.1| - 3.5e-05 24.1 0.1 3.9e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent adh_short_C2 PF13561.1 gi|21226251|ref|NP_632173.1| - 0.00016 21.5 0.1 0.0002 21.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase NAD_binding_10 PF13460.1 gi|21226251|ref|NP_632173.1| - 0.00017 21.6 0.0 0.00019 21.5 0.0 1.0 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|21226251|ref|NP_632173.1| - 0.00051 19.5 0.0 0.00057 19.3 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|21226251|ref|NP_632173.1| - 0.00099 18.0 0.1 0.001 18.0 0.1 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Eno-Rase_NADH_b PF12242.3 gi|21226251|ref|NP_632173.1| - 0.0012 18.5 0.1 0.0015 18.3 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3HCDH_N PF02737.13 gi|21226251|ref|NP_632173.1| - 0.0013 18.4 0.0 0.0014 18.3 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|21226251|ref|NP_632173.1| - 0.002 18.0 0.1 0.0021 18.0 0.0 1.1 1 0 0 1 1 1 1 TrkA-N domain Pyr_redox PF00070.22 gi|21226251|ref|NP_632173.1| - 0.0088 16.4 0.1 0.011 16.1 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase RmlD_sub_bind PF04321.12 gi|21226251|ref|NP_632173.1| - 0.01 14.7 0.0 0.012 14.5 0.0 1.0 1 0 0 1 1 1 0 RmlD substrate binding domain Rossmann-like PF10727.4 gi|21226251|ref|NP_632173.1| - 0.013 15.2 0.2 0.023 14.4 0.1 1.5 1 1 0 1 1 1 0 Rossmann-like domain Saccharop_dh PF03435.13 gi|21226251|ref|NP_632173.1| - 0.018 14.0 0.1 0.021 13.8 0.0 1.0 1 0 0 1 1 1 0 Saccharopine dehydrogenase Helicase_RecD PF05127.9 gi|21226251|ref|NP_632173.1| - 0.021 14.4 0.1 0.022 14.4 0.0 1.0 1 0 0 1 1 1 0 Helicase NAD_binding_2 PF03446.10 gi|21226251|ref|NP_632173.1| - 0.026 14.3 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.15 gi|21226251|ref|NP_632173.1| - 0.032 14.3 0.1 0.036 14.1 0.1 1.0 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase 3Beta_HSD PF01073.14 gi|21226251|ref|NP_632173.1| - 0.061 12.0 0.0 0.067 11.8 0.0 1.0 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family ADH_zinc_N PF00107.21 gi|21226251|ref|NP_632173.1| - 0.068 12.7 0.2 0.1 12.1 0.1 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.14 gi|21226251|ref|NP_632173.1| - 0.08 12.0 0.0 0.08 12.0 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DFP PF04127.10 gi|21226251|ref|NP_632173.1| - 0.092 12.3 0.2 0.16 11.5 0.1 1.5 1 1 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein THF_DHG_CYH_C PF02882.14 gi|21226251|ref|NP_632173.1| - 0.12 11.4 0.1 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ApbA PF02558.11 gi|21226251|ref|NP_632173.1| - 0.13 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NmrA PF05368.8 gi|21226252|ref|NP_632174.1| - 9.6e-30 103.5 0.0 1.2e-29 103.2 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.1 gi|21226252|ref|NP_632174.1| - 1.7e-23 83.5 0.0 2.3e-23 83.1 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|21226252|ref|NP_632174.1| - 1.5e-07 31.1 0.0 2.6e-06 27.0 0.0 2.5 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|21226252|ref|NP_632174.1| - 4.1e-07 28.9 0.0 1.7e-06 26.9 0.0 1.9 2 1 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family TrkA_N PF02254.13 gi|21226252|ref|NP_632174.1| - 0.0002 21.3 0.1 0.0013 18.7 0.0 2.2 2 1 0 2 2 2 1 TrkA-N domain adh_short_C2 PF13561.1 gi|21226252|ref|NP_632174.1| - 0.00054 19.7 0.1 0.39 10.4 0.0 3.2 2 1 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase RmlD_sub_bind PF04321.12 gi|21226252|ref|NP_632174.1| - 0.00067 18.6 0.0 0.66 8.8 0.0 2.2 2 0 0 2 2 2 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|21226252|ref|NP_632174.1| - 0.0012 17.7 0.0 0.0028 16.6 0.0 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_Gly3P_dh_N PF01210.18 gi|21226252|ref|NP_632174.1| - 0.0017 18.0 0.0 0.0046 16.6 0.0 1.7 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus adh_short PF00106.20 gi|21226252|ref|NP_632174.1| - 0.0034 17.3 0.0 0.0076 16.1 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase DapB_N PF01113.15 gi|21226252|ref|NP_632174.1| - 0.013 15.4 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NAD_binding_4 PF07993.7 gi|21226252|ref|NP_632174.1| - 0.052 12.4 0.0 0.27 10.1 0.0 2.0 2 0 0 2 2 2 0 Male sterility protein Semialdhyde_dh PF01118.19 gi|21226252|ref|NP_632174.1| - 0.071 13.4 0.0 0.14 12.4 0.0 1.6 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain KR PF08659.5 gi|21226252|ref|NP_632174.1| - 0.13 11.8 0.1 0.29 10.7 0.0 1.6 2 0 0 2 2 2 0 KR domain D5_N PF08706.6 gi|21226253|ref|NP_632175.1| - 1.1e-07 31.9 0.1 4.3e-07 30.1 0.0 2.0 1 0 0 1 1 1 1 D5 N terminal like Pox_D5 PF03288.11 gi|21226253|ref|NP_632175.1| - 0.0056 16.9 0.4 0.017 15.3 0.1 2.0 2 0 0 2 2 2 1 Poxvirus D5 protein-like PGM_PMM_III PF02880.11 gi|21226253|ref|NP_632175.1| - 0.096 12.7 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Phage_integrase PF00589.17 gi|21226254|ref|NP_632176.1| - 6.9e-19 68.1 0.0 1.2e-18 67.4 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|21226254|ref|NP_632176.1| - 7.1e-09 35.8 1.0 3.2e-08 33.7 0.1 2.2 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|21226254|ref|NP_632176.1| - 1e-06 28.8 0.1 3.7e-06 26.9 0.0 2.0 2 0 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain DZR PF12773.2 gi|21226254|ref|NP_632176.1| - 0.00061 19.5 0.8 0.0011 18.7 0.6 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21226254|ref|NP_632176.1| - 0.0046 16.3 3.5 0.0095 15.4 2.4 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Topoisom_I PF01028.15 gi|21226254|ref|NP_632176.1| - 0.009 15.1 0.0 0.019 14.0 0.0 1.5 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Cript PF10235.4 gi|21226254|ref|NP_632176.1| - 0.011 16.0 0.2 0.027 14.8 0.1 1.6 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT zf-ribbon_3 PF13248.1 gi|21226254|ref|NP_632176.1| - 0.02 14.1 4.4 0.04 13.1 3.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Mu-like_Com PF10122.4 gi|21226254|ref|NP_632176.1| - 0.15 11.1 1.7 0.53 9.3 1.2 1.9 1 1 0 1 1 1 0 Mu-like prophage protein Com DUF1788 PF08747.6 gi|21226255|ref|NP_632177.1| - 7.9e-46 155.0 0.1 1.3e-45 154.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1788) NACHT PF05729.7 gi|21226256|ref|NP_632178.1| - 0.037 13.6 0.0 0.12 12.0 0.0 1.9 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.14 gi|21226256|ref|NP_632178.1| - 0.17 11.1 7.5 0.014 14.6 0.5 2.8 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain TPR_12 PF13424.1 gi|21226257|ref|NP_632179.1| - 6.2e-30 102.9 32.0 6.1e-08 32.4 0.9 7.6 4 3 3 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226257|ref|NP_632179.1| - 1.9e-19 67.9 40.2 0.0034 17.0 0.3 11.4 11 0 0 11 11 11 5 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226257|ref|NP_632179.1| - 4.1e-19 67.3 35.6 0.006 16.1 0.0 10.6 11 1 1 12 12 12 7 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226257|ref|NP_632179.1| - 1.1e-16 59.2 20.4 0.021 14.5 0.1 10.2 11 0 0 11 11 11 4 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226257|ref|NP_632179.1| - 2.7e-16 58.9 30.8 5e-06 26.0 0.7 7.8 4 3 3 7 7 7 7 TPR repeat TPR_10 PF13374.1 gi|21226257|ref|NP_632179.1| - 9.3e-15 54.0 11.2 0.011 15.6 0.1 9.5 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226257|ref|NP_632179.1| - 1.6e-14 53.0 8.9 0.46 11.2 0.2 11.2 9 3 3 12 12 11 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226257|ref|NP_632179.1| - 2.4e-13 48.8 40.8 0.023 14.5 0.4 11.4 11 2 1 12 12 12 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226257|ref|NP_632179.1| - 6.6e-08 32.7 26.6 0.11 12.8 0.0 9.5 5 3 5 10 10 10 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226257|ref|NP_632179.1| - 9.9e-08 32.4 11.5 3.7 8.3 0.0 9.3 7 2 2 9 9 9 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226257|ref|NP_632179.1| - 7.2e-07 29.2 30.7 8.1 7.1 0.5 11.3 11 3 0 11 11 11 2 Tetratricopeptide repeat MIT PF04212.13 gi|21226257|ref|NP_632179.1| - 2.2e-06 27.4 25.0 0.21 11.5 0.3 7.8 8 1 1 9 9 9 3 MIT (microtubule interacting and transport) domain DUF2225 PF09986.4 gi|21226257|ref|NP_632179.1| - 0.0002 20.8 17.6 0.062 12.7 0.2 5.0 2 1 2 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2225) TPR_17 PF13431.1 gi|21226257|ref|NP_632179.1| - 0.00044 20.2 14.4 11 6.5 0.1 9.3 10 1 0 10 10 10 0 Tetratricopeptide repeat X_fast-SP_rel PF06669.6 gi|21226257|ref|NP_632179.1| - 0.15 12.0 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Xylella fastidiosa surface protein related TPR_21 PF09976.4 gi|21226257|ref|NP_632179.1| - 2.8 7.8 15.1 8.2 6.3 0.1 4.8 4 1 0 4 4 4 0 Tetratricopeptide repeat Methyltransf_26 PF13659.1 gi|21226258|ref|NP_632180.1| - 3.3e-17 62.5 0.0 7.1e-17 61.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.11 gi|21226258|ref|NP_632180.1| - 5.7e-11 42.0 0.0 1.7e-05 24.0 0.0 2.4 2 0 0 2 2 2 2 N-6 DNA Methylase Eco57I PF07669.6 gi|21226258|ref|NP_632180.1| - 2.3e-10 40.7 0.0 1.2e-09 38.4 0.0 2.3 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Dzip-like_N PF13815.1 gi|21226258|ref|NP_632180.1| - 0.029 14.1 0.2 0.075 12.8 0.1 1.7 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal UPF0020 PF01170.13 gi|21226258|ref|NP_632180.1| - 0.097 12.2 0.1 6.4 6.3 0.0 2.6 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 HATPase_c_4 PF13749.1 gi|21226259|ref|NP_632181.1| - 2.5e-25 88.0 0.0 4.1e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HTH_27 PF13463.1 gi|21226259|ref|NP_632181.1| - 0.00049 20.3 0.1 0.0011 19.2 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|21226259|ref|NP_632181.1| - 0.0012 18.8 0.1 0.002 18.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|21226259|ref|NP_632181.1| - 0.0034 17.1 0.1 0.0062 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.9 gi|21226259|ref|NP_632181.1| - 0.046 13.4 0.0 0.094 12.4 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|21226260|ref|NP_632182.1| - 7.8e-05 22.4 0.0 0.00017 21.3 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|21226260|ref|NP_632182.1| - 0.0056 16.9 0.0 0.019 15.2 0.0 1.9 2 1 0 2 2 2 1 Winged helix DNA-binding domain PadR PF03551.9 gi|21226260|ref|NP_632182.1| - 0.016 14.9 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family YjcQ PF09639.5 gi|21226260|ref|NP_632182.1| - 0.059 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 YjcQ protein YcfA PF07927.7 gi|21226262|ref|NP_632184.1| - 1.2e-15 57.1 0.1 1.6e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 YcfA-like protein BRX_N PF13713.1 gi|21226262|ref|NP_632184.1| - 0.16 11.4 0.4 0.38 10.2 0.0 1.7 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain UPF0150 PF03681.10 gi|21226263|ref|NP_632185.1| - 0.0071 15.9 0.0 0.0077 15.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) CBM_19 PF03427.8 gi|21226263|ref|NP_632185.1| - 0.081 12.7 0.1 0.081 12.7 0.1 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) Arch_ATPase PF01637.13 gi|21226264|ref|NP_632186.1| - 1.6e-26 93.4 2.0 1.6e-26 93.4 1.4 2.5 2 1 0 2 2 2 1 Archaeal ATPase DUF234 PF03008.9 gi|21226264|ref|NP_632186.1| - 3.5e-23 81.6 0.5 2.5e-22 78.8 0.2 2.5 2 0 0 2 2 2 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.1 gi|21226264|ref|NP_632186.1| - 6.1e-12 45.5 1.0 1.6e-11 44.1 0.2 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21226264|ref|NP_632186.1| - 1.1e-05 25.6 0.0 2.2e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|21226264|ref|NP_632186.1| - 0.00046 20.3 0.2 0.0012 18.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) AAA_16 PF13191.1 gi|21226264|ref|NP_632186.1| - 0.002 18.1 0.1 0.055 13.4 0.0 2.5 1 1 0 2 2 2 1 AAA ATPase domain HAD PF12710.2 gi|21226264|ref|NP_632186.1| - 0.0039 17.3 0.0 0.1 12.7 0.0 2.3 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Miro PF08477.8 gi|21226264|ref|NP_632186.1| - 0.014 15.9 0.0 0.35 11.3 0.0 2.7 3 0 0 3 3 3 0 Miro-like protein HTH_5 PF01022.15 gi|21226264|ref|NP_632186.1| - 0.021 14.4 0.1 0.049 13.3 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|21226264|ref|NP_632186.1| - 0.095 12.1 0.0 0.36 10.2 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding PglZ PF08665.7 gi|21226265|ref|NP_632187.1| - 6.7e-63 211.6 0.1 6.7e-63 211.6 0.1 2.5 3 0 0 3 3 3 1 PglZ domain Thioredoxin_2 PF13098.1 gi|21226265|ref|NP_632187.1| - 0.004 17.3 0.1 0.72 10.0 0.1 3.0 2 0 0 2 2 2 2 Thioredoxin-like domain Lon_2 PF13337.1 gi|21226266|ref|NP_632188.1| - 2.2e-216 718.5 0.8 2.7e-216 718.3 0.6 1.0 1 0 0 1 1 1 1 Putative ATP-dependent Lon protease Lon_C PF05362.8 gi|21226266|ref|NP_632188.1| - 7.3e-07 28.7 0.0 1.5e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.1 gi|21226266|ref|NP_632188.1| - 0.26 10.8 1.0 1.1 8.7 0.1 2.2 2 0 0 2 2 2 0 Subunit ChlI of Mg-chelatase Saccharop_dh PF03435.13 gi|21226268|ref|NP_632190.1| - 2.1e-95 319.9 0.0 2.4e-95 319.7 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase Cation_efflux PF01545.16 gi|21226269|ref|NP_632191.1| - 2.3e-56 190.9 6.1 3e-56 190.5 4.2 1.1 1 0 0 1 1 1 1 Cation efflux family DUF2104 PF09877.4 gi|21226269|ref|NP_632191.1| - 1 9.3 4.9 0.28 11.1 0.2 2.3 2 1 1 3 3 3 0 Predicted membrane protein (DUF2104) PAS_9 PF13426.1 gi|21226270|ref|NP_632192.1| - 4.7e-91 300.0 2.9 1.4e-19 70.3 0.0 9.3 9 0 0 9 9 9 7 PAS domain PAS_4 PF08448.5 gi|21226270|ref|NP_632192.1| - 1.6e-82 272.7 0.0 1.1e-20 73.6 0.0 8.7 8 0 0 8 8 8 6 PAS fold PAS PF00989.19 gi|21226270|ref|NP_632192.1| - 2.3e-75 249.6 0.3 1.2e-16 60.4 0.0 8.9 9 0 0 9 9 9 7 PAS fold PAS_3 PF08447.6 gi|21226270|ref|NP_632192.1| - 1.1e-45 153.6 0.1 4e-16 58.8 0.0 7.4 7 0 0 7 7 6 5 PAS fold GAF_2 PF13185.1 gi|21226270|ref|NP_632192.1| - 6.2e-38 130.5 0.0 5.8e-20 72.2 0.0 3.6 3 0 0 3 3 3 2 GAF domain PAS_8 PF13188.1 gi|21226270|ref|NP_632192.1| - 6.1e-37 124.2 0.0 2.2e-09 36.8 0.0 8.3 9 0 0 9 9 9 6 PAS domain HisKA_2 PF07568.7 gi|21226270|ref|NP_632192.1| - 3.2e-34 116.6 0.4 1.6e-33 114.3 0.2 2.4 1 0 0 1 1 1 1 Histidine kinase PAS_7 PF12860.2 gi|21226270|ref|NP_632192.1| - 3.5e-17 62.4 7.4 0.0074 16.2 0.0 9.4 8 4 0 8 8 8 4 PAS fold PAS_10 PF13596.1 gi|21226270|ref|NP_632192.1| - 1.4e-16 60.6 0.0 1.4e-08 34.9 0.0 6.6 7 0 0 7 7 7 2 PAS domain HATPase_c PF02518.21 gi|21226270|ref|NP_632192.1| - 1e-11 44.4 0.1 2.8e-11 43.1 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_3 PF13492.1 gi|21226270|ref|NP_632192.1| - 5.4e-08 33.0 0.0 0.0094 16.0 0.0 3.6 4 0 0 4 4 4 2 GAF domain HATPase_c_2 PF13581.1 gi|21226270|ref|NP_632192.1| - 3.9e-06 26.6 0.0 9.6e-06 25.3 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21226270|ref|NP_632192.1| - 0.00058 20.2 0.0 0.0027 18.1 0.0 2.2 2 0 0 2 2 2 1 HWE histidine kinase GAF PF01590.21 gi|21226270|ref|NP_632192.1| - 0.0012 18.9 0.0 0.4 10.7 0.0 3.3 4 0 0 4 4 4 1 GAF domain ZYG-11_interact PF05884.7 gi|21226270|ref|NP_632192.1| - 0.55 9.2 0.2 1 8.3 0.2 1.3 1 0 0 1 1 1 0 Interactor of ZYG-11 PAS_3 PF08447.6 gi|21226271|ref|NP_632193.1| - 7.6e-44 147.7 1.3 1.1e-15 57.5 0.1 5.4 4 2 0 4 4 4 4 PAS fold HisKA_2 PF07568.7 gi|21226271|ref|NP_632193.1| - 1.4e-35 120.9 5.0 4.7e-35 119.2 0.6 3.3 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.1 gi|21226271|ref|NP_632193.1| - 8.4e-34 116.0 0.1 2.8e-12 46.9 0.0 5.5 5 0 0 5 5 5 4 PAS domain PAS_4 PF08448.5 gi|21226271|ref|NP_632193.1| - 3.9e-27 94.4 0.3 1.6e-10 40.9 0.0 5.1 4 1 0 4 4 4 3 PAS fold PAS PF00989.19 gi|21226271|ref|NP_632193.1| - 6.5e-18 64.5 0.1 0.0024 17.6 0.0 5.7 5 1 0 5 5 5 4 PAS fold HATPase_c PF02518.21 gi|21226271|ref|NP_632193.1| - 6.7e-10 38.6 0.2 1.7e-09 37.3 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|21226271|ref|NP_632193.1| - 3e-07 30.4 2.8 2.1e-05 24.4 0.0 4.1 4 1 0 4 4 3 1 PAS fold HWE_HK PF07536.9 gi|21226271|ref|NP_632193.1| - 0.00011 22.5 1.3 0.00063 20.1 0.2 2.7 2 0 0 2 2 2 1 HWE histidine kinase PAS_8 PF13188.1 gi|21226271|ref|NP_632193.1| - 0.00039 20.1 0.0 0.007 16.1 0.0 3.0 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|21226271|ref|NP_632193.1| - 0.0022 17.7 0.0 0.0063 16.2 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_10 PF13596.1 gi|21226271|ref|NP_632193.1| - 0.011 16.0 0.4 7.1 6.9 0.0 4.3 5 1 0 5 5 5 0 PAS domain DUF619 PF04768.8 gi|21226271|ref|NP_632193.1| - 0.02 14.3 0.0 0.087 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF619) DUF2560 PF10834.3 gi|21226271|ref|NP_632193.1| - 0.8 9.7 3.8 7.2 6.6 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2560) DDE_3 PF13358.1 gi|21226272|ref|NP_632194.1| - 5.8e-20 71.5 0.1 7.4e-20 71.1 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF3228 PF11539.3 gi|21226272|ref|NP_632194.1| - 0.00036 19.7 0.4 0.00062 18.9 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) rve PF00665.21 gi|21226272|ref|NP_632194.1| - 0.007 16.4 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DUF287 PF03384.9 gi|21226272|ref|NP_632194.1| - 0.037 14.2 1.9 0.054 13.6 0.3 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 zf-C4H2 PF10146.4 gi|21226272|ref|NP_632194.1| - 1.6 8.6 5.3 2.6 8.0 3.1 1.7 1 1 0 1 1 1 0 Zinc finger-containing protein HTH_29 PF13551.1 gi|21226273|ref|NP_632195.1| - 3.6e-22 78.6 0.1 4.5e-22 78.3 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21226273|ref|NP_632195.1| - 3.1e-11 43.8 0.3 7.3e-10 39.5 0.0 2.1 1 1 1 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21226273|ref|NP_632195.1| - 2.6e-09 36.4 0.0 7.4e-09 34.9 0.0 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21226273|ref|NP_632195.1| - 1.7e-08 34.3 0.0 3.7e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.10 gi|21226273|ref|NP_632195.1| - 0.00012 21.8 0.4 0.00077 19.2 0.4 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase TrmB PF01978.14 gi|21226273|ref|NP_632195.1| - 0.0041 16.7 0.1 0.31 10.7 0.1 2.3 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|21226273|ref|NP_632195.1| - 0.0068 16.0 0.1 0.013 15.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_17 PF12728.2 gi|21226273|ref|NP_632195.1| - 0.12 12.6 0.7 0.4 10.9 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain PocR PF10114.4 gi|21226274|ref|NP_632196.1| - 2.4e-70 235.1 0.0 4.1e-70 234.4 0.0 1.4 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|21226274|ref|NP_632196.1| - 7.2e-25 87.3 0.0 4.2e-17 62.4 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|21226274|ref|NP_632196.1| - 2.8e-21 75.5 0.0 6.4e-12 45.4 0.0 2.7 3 0 0 3 3 3 2 PAS fold PAS PF00989.19 gi|21226274|ref|NP_632196.1| - 2e-20 72.6 0.0 1.1e-13 50.9 0.0 3.6 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.6 gi|21226274|ref|NP_632196.1| - 2.1e-08 34.1 0.0 7.9e-05 22.6 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|21226274|ref|NP_632196.1| - 3.7e-08 32.9 0.0 4.5e-06 26.3 0.0 3.6 4 0 0 4 4 4 1 PAS domain CbiZ PF01955.13 gi|21226275|ref|NP_632197.1| - 1.8e-52 177.8 0.1 2.3e-52 177.6 0.1 1.0 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase B12-binding PF02310.14 gi|21226276|ref|NP_632198.1| - 2.9e-20 72.3 0.5 5.7e-20 71.4 0.3 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21226276|ref|NP_632198.1| - 9.5e-15 54.3 0.1 2.1e-14 53.3 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain UPF0180 PF03698.8 gi|21226276|ref|NP_632198.1| - 0.031 14.1 0.0 3 7.7 0.0 3.1 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0180) Mut7-C PF01927.11 gi|21226276|ref|NP_632198.1| - 0.052 13.5 0.0 0.091 12.7 0.0 1.3 1 0 0 1 1 1 0 Mut7-C RNAse domain MtaB PF12176.3 gi|21226277|ref|NP_632199.1| - 2.2e-251 834.0 8.1 2.5e-251 833.9 5.6 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit URO-D PF01208.12 gi|21226278|ref|NP_632200.1| - 4.1e-87 292.2 0.0 4.7e-87 292.1 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Macro PF01661.16 gi|21226279|ref|NP_632201.1| - 4.8e-45 152.2 0.0 7.4e-45 151.6 0.0 1.3 1 0 0 1 1 1 1 Macro domain DHquinase_I PF01487.10 gi|21226279|ref|NP_632201.1| - 0.089 12.4 0.0 4.4 6.9 0.0 2.3 2 1 0 2 2 2 0 Type I 3-dehydroquinase TPR_2 PF07719.12 gi|21226280|ref|NP_632202.1| - 4.6e-245 772.5 145.7 7.9e-07 28.5 0.1 47.9 48 0 0 48 48 48 43 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226280|ref|NP_632202.1| - 1.9e-239 764.6 123.0 2.7e-08 33.0 0.1 47.6 48 0 0 48 48 48 41 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226280|ref|NP_632202.1| - 1.1e-225 729.7 162.1 2.2e-13 49.6 0.5 27.4 8 4 17 33 33 33 32 TPR repeat TPR_16 PF13432.1 gi|21226280|ref|NP_632202.1| - 2.9e-191 617.1 92.4 1.1e-10 41.8 0.6 28.8 15 7 16 33 33 33 31 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226280|ref|NP_632202.1| - 4.3e-154 501.0 97.7 8e-09 35.7 0.6 27.5 18 6 11 29 29 29 27 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226280|ref|NP_632202.1| - 5.7e-135 429.3 111.2 3.4e-05 23.3 0.0 45.2 40 7 8 48 48 46 29 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226280|ref|NP_632202.1| - 8.1e-128 405.0 105.6 0.00015 22.0 0.1 46.5 9 6 39 48 48 48 30 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226280|ref|NP_632202.1| - 1.9e-118 386.5 98.6 2e-08 34.0 0.0 27.4 5 3 26 32 32 32 28 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226280|ref|NP_632202.1| - 6.1e-118 384.8 70.0 1.3e-09 37.7 1.1 29.0 10 8 19 30 30 30 21 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226280|ref|NP_632202.1| - 2.8e-114 364.0 76.8 0.00086 19.3 0.0 41.7 44 0 0 44 44 41 20 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21226280|ref|NP_632202.1| - 8.6e-114 364.5 97.2 0.00031 21.0 0.1 45.3 47 0 0 47 47 45 21 Tetratricopeptide repeat Apc3 PF12895.2 gi|21226280|ref|NP_632202.1| - 5e-103 337.4 80.3 4.9e-08 32.9 0.5 22.6 5 5 21 28 28 28 25 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|21226280|ref|NP_632202.1| - 1.7e-66 219.9 78.5 3.4e-05 23.6 0.0 34.7 17 12 20 37 37 37 14 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.1 gi|21226280|ref|NP_632202.1| - 1.3e-54 177.7 91.3 0.0025 17.4 0.0 38.9 40 5 4 44 44 39 11 Tetratricopeptide repeat NARP1 PF12569.3 gi|21226280|ref|NP_632202.1| - 9e-48 163.2 67.1 7e-05 21.7 1.2 18.7 4 4 11 18 18 18 15 NMDA receptor-regulated protein 1 TPR_10 PF13374.1 gi|21226280|ref|NP_632202.1| - 1.1e-31 107.7 106.0 0.033 14.1 0.0 33.0 39 1 1 40 40 33 8 Tetratricopeptide repeat BTAD PF03704.12 gi|21226280|ref|NP_632202.1| - 2.3e-27 96.1 63.4 0.038 14.2 0.1 18.5 7 6 9 19 19 19 8 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|21226280|ref|NP_632202.1| - 3.3e-27 94.4 60.8 0.011 15.7 0.3 23.2 10 6 12 27 27 26 6 Tetratricopeptide repeat TPR_15 PF13429.1 gi|21226280|ref|NP_632202.1| - 1.9e-23 82.9 63.0 0.0043 16.1 0.1 16.7 5 4 10 16 16 16 9 Tetratricopeptide repeat YfiO PF13525.1 gi|21226280|ref|NP_632202.1| - 4.9e-21 75.1 30.7 0.00016 21.2 0.3 14.0 7 6 8 15 15 15 5 Outer membrane lipoprotein Coatomer_E PF04733.9 gi|21226280|ref|NP_632202.1| - 6.3e-21 74.8 46.9 0.0051 16.0 0.1 16.4 6 4 10 19 19 19 8 Coatomer epsilon subunit TPR_4 PF07721.9 gi|21226280|ref|NP_632202.1| - 1.9e-17 61.8 27.3 12 6.6 0.4 20.0 25 0 0 25 25 17 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|21226280|ref|NP_632202.1| - 3.3e-13 49.6 51.4 0.073 12.8 0.1 22.0 14 9 9 23 23 21 2 Domain of Unknown Function (DUF3856) Paf67 PF10255.4 gi|21226280|ref|NP_632202.1| - 5.8e-12 45.2 0.1 3.5 6.4 0.0 13.8 8 3 9 19 19 19 1 RNA polymerase I-associated factor PAF67 TPR_18 PF13512.1 gi|21226280|ref|NP_632202.1| - 9.3e-10 38.6 20.7 0.79 9.7 0.3 11.2 6 4 4 10 10 10 2 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|21226280|ref|NP_632202.1| - 1.9e-09 37.1 3.9 39 4.1 0.0 13.3 14 3 3 17 17 13 0 Rapsyn N-terminal myristoylation and linker region PPTA PF01239.17 gi|21226280|ref|NP_632202.1| - 6.8e-08 31.5 4.8 1.7 8.1 0.0 9.7 10 0 0 10 10 7 1 Protein prenyltransferase alpha subunit repeat RPN7 PF10602.4 gi|21226280|ref|NP_632202.1| - 1.4e-07 31.0 36.0 0.21 10.9 0.1 14.9 10 6 6 16 16 15 2 26S proteasome subunit RPN7 TPR_5 PF12688.2 gi|21226280|ref|NP_632202.1| - 2.3e-07 30.8 32.3 2.1 8.3 0.0 14.6 9 5 8 18 18 18 1 Tetratrico peptide repeat DUF627 PF04781.7 gi|21226280|ref|NP_632202.1| - 4e-06 26.4 5.0 2.9 7.5 0.0 8.6 9 1 0 9 9 7 1 Protein of unknown function (DUF627) PSDC PF12588.3 gi|21226280|ref|NP_632202.1| - 1e-05 25.1 0.1 22 4.6 0.0 8.1 8 2 1 9 9 9 0 Phophatidylserine decarboxylase FAT PF02259.18 gi|21226280|ref|NP_632202.1| - 3.7e-05 22.8 18.5 0.0031 16.5 0.2 8.5 9 3 0 10 10 10 1 FAT domain FrhB_FdhB_C PF04432.8 gi|21226280|ref|NP_632202.1| - 8.4e-05 22.0 0.1 0.53 9.6 0.0 5.5 5 1 0 5 5 5 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus ChAPs PF09295.5 gi|21226280|ref|NP_632202.1| - 9.1e-05 21.3 8.2 0.7 8.5 0.0 6.8 6 1 1 8 8 8 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_3 PF07720.7 gi|21226280|ref|NP_632202.1| - 0.00016 21.3 63.0 6.6 6.6 0.0 21.0 27 0 0 27 27 20 0 Tetratricopeptide repeat PriCT_2 PF08707.6 gi|21226280|ref|NP_632202.1| - 0.00022 21.0 3.0 13 5.6 0.0 6.3 4 2 2 6 6 5 0 Primase C terminal 2 (PriCT-2) Alkyl_sulf_dimr PF14863.1 gi|21226280|ref|NP_632202.1| - 0.00059 20.0 18.0 20 5.3 0.1 9.9 10 3 0 11 11 7 0 Alkyl sulfatase dimerisation Nterm_IS4 PF13006.2 gi|21226280|ref|NP_632202.1| - 0.001 19.0 0.0 23 5.0 0.0 6.0 6 1 1 7 7 6 0 Insertion element 4 transposase N-terminal TOM20_plant PF06552.7 gi|21226280|ref|NP_632202.1| - 0.015 14.8 26.7 3.2 7.2 0.0 11.6 12 2 0 13 13 13 0 Plant specific mitochondrial import receptor subunit TOM20 PPR PF01535.15 gi|21226280|ref|NP_632202.1| - 0.018 15.0 72.0 12 6.0 0.0 23.8 28 0 0 28 28 23 0 PPR repeat DDT PF02791.12 gi|21226280|ref|NP_632202.1| - 0.073 12.8 3.9 4.7 7.0 0.0 6.1 8 0 0 8 8 4 0 DDT domain Foie-gras_1 PF11817.3 gi|21226280|ref|NP_632202.1| - 1.2 8.5 23.0 0.0088 15.5 1.1 6.5 6 2 2 8 8 6 0 Foie gras liver health family 1 DUF3303 PF11746.3 gi|21226281|ref|NP_632203.1| - 5.6e-05 23.4 0.0 8.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) Acetyltransf_1 PF00583.19 gi|21226282|ref|NP_632204.1| - 2.3e-16 59.6 0.0 3.8e-16 58.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21226282|ref|NP_632204.1| - 5.8e-10 39.1 0.1 9e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21226282|ref|NP_632204.1| - 2.9e-07 30.5 0.0 4e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21226282|ref|NP_632204.1| - 8.1e-06 25.7 0.0 1.5e-05 24.9 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21226282|ref|NP_632204.1| - 0.00014 21.6 0.0 0.00026 20.7 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.1 gi|21226282|ref|NP_632204.1| - 0.0018 18.4 0.0 0.0024 18.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21226282|ref|NP_632204.1| - 0.0037 17.2 0.0 0.0049 16.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|21226282|ref|NP_632204.1| - 0.015 15.2 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21226282|ref|NP_632204.1| - 0.028 14.1 0.0 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 FR47-like protein Acetyltransf_9 PF13527.1 gi|21226282|ref|NP_632204.1| - 0.035 13.9 0.0 0.052 13.4 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF2156 PF09924.4 gi|21226283|ref|NP_632205.1| - 2.2e-57 194.1 0.0 2.5e-57 194.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2156) ThiC PF01964.13 gi|161485683|ref|NP_632206.2| - 4.1e-188 625.1 0.1 4.6e-188 624.9 0.0 1.0 1 0 0 1 1 1 1 ThiC family Adhesin_Dr PF04619.7 gi|161485683|ref|NP_632206.2| - 0.06 13.0 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Dr-family adhesin Topoisom_bac PF01131.15 gi|21226285|ref|NP_632207.1| - 2.6e-102 342.6 0.1 3.6e-102 342.2 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.17 gi|21226285|ref|NP_632207.1| - 3.6e-16 58.9 0.1 1.3e-15 57.2 0.0 2.0 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.14 gi|21226285|ref|NP_632207.1| - 1.7e-13 49.8 10.9 1e-08 34.5 0.3 3.6 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger OEP PF02321.13 gi|21226285|ref|NP_632207.1| - 0.0093 15.5 0.0 0.02 14.4 0.0 1.5 1 0 0 1 1 1 1 Outer membrane efflux protein Auto_anti-p27 PF06677.7 gi|21226285|ref|NP_632207.1| - 0.01 15.5 0.1 0.01 15.5 0.1 3.0 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_4 PF13662.1 gi|21226285|ref|NP_632207.1| - 0.087 12.8 0.4 0.32 11.0 0.3 2.0 1 1 0 1 1 1 0 Toprim domain DUF1451 PF07295.6 gi|21226285|ref|NP_632207.1| - 1.5 8.5 9.4 0.23 11.2 0.7 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1451) Ribosomal_S3Ae PF01015.13 gi|21226286|ref|NP_632208.1| - 5.3e-71 237.9 4.1 6.4e-71 237.7 2.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF3672 PF12421.3 gi|21226286|ref|NP_632208.1| - 0.024 14.7 1.9 0.038 14.1 1.4 1.4 1 1 0 1 1 1 0 Fibronectin type III protein adh_short PF00106.20 gi|21226287|ref|NP_632209.1| - 5.7e-33 114.1 0.0 7.1e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|21226287|ref|NP_632209.1| - 4.2e-29 102.0 0.2 5.1e-29 101.7 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|21226287|ref|NP_632209.1| - 1.5e-14 54.0 0.1 2e-14 53.6 0.1 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.10 gi|21226287|ref|NP_632209.1| - 2e-05 23.6 0.2 2.7e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.16 gi|21226287|ref|NP_632209.1| - 0.00013 21.4 0.1 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.1 gi|21226287|ref|NP_632209.1| - 0.00054 20.0 0.1 0.0013 18.7 0.1 1.6 1 1 0 1 1 1 1 NADH(P)-binding Pyr_redox PF00070.22 gi|21226287|ref|NP_632209.1| - 0.00076 19.8 1.2 0.0031 17.8 0.2 2.5 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3Beta_HSD PF01073.14 gi|21226287|ref|NP_632209.1| - 0.0054 15.4 0.2 0.0067 15.1 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DFP PF04127.10 gi|21226287|ref|NP_632209.1| - 0.021 14.4 0.1 0.041 13.4 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NmrA PF05368.8 gi|21226287|ref|NP_632209.1| - 0.046 12.9 0.1 0.065 12.4 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family Enoyl_reductase PF12241.3 gi|21226287|ref|NP_632209.1| - 0.052 12.5 0.1 0.084 11.8 0.0 1.3 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region 3HCDH_N PF02737.13 gi|21226287|ref|NP_632209.1| - 0.062 12.9 0.9 0.1 12.2 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_transf_5 PF08323.6 gi|21226287|ref|NP_632209.1| - 0.09 12.2 0.0 4.5 6.6 0.0 2.2 2 0 0 2 2 2 0 Starch synthase catalytic domain RmlD_sub_bind PF04321.12 gi|21226287|ref|NP_632209.1| - 0.092 11.6 0.1 0.15 10.9 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Glyco_trans_4_2 PF13477.1 gi|21226287|ref|NP_632209.1| - 0.1 12.4 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase 4-like GYD PF08734.6 gi|21226288|ref|NP_632210.1| - 1.7e-27 94.9 0.0 2e-27 94.7 0.0 1.0 1 0 0 1 1 1 1 GYD domain NTP_transf_2 PF01909.18 gi|21226289|ref|NP_632211.1| - 5.8e-14 52.1 1.0 6.8e-14 51.9 0.7 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21226289|ref|NP_632211.1| - 0.0009 19.2 0.0 0.00094 19.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm DUF86 PF01934.12 gi|21226290|ref|NP_632212.1| - 3.5e-25 87.9 0.0 4.4e-25 87.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 GYD PF08734.6 gi|21226291|ref|NP_632213.1| - 6e-27 93.2 0.0 6.8e-27 93.0 0.0 1.0 1 0 0 1 1 1 1 GYD domain HCV_NS4b PF01001.14 gi|21226291|ref|NP_632213.1| - 0.054 12.8 0.0 0.17 11.2 0.0 1.7 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4b UvrD-helicase PF00580.16 gi|21226292|ref|NP_632214.1| - 5.8e-43 147.3 7.4 3.7e-22 79.0 0.0 3.2 3 1 0 4 4 4 2 UvrD/REP helicase N-terminal domain UvrD_C PF13361.1 gi|21226292|ref|NP_632214.1| - 1.3e-39 136.6 0.0 3.9e-25 89.0 0.0 2.7 3 0 0 3 3 3 2 UvrD-like helicase C-terminal domain PDDEXK_1 PF12705.2 gi|21226292|ref|NP_632214.1| - 4.8e-23 81.8 1.0 1.2e-22 80.6 0.1 2.0 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.12 gi|21226292|ref|NP_632214.1| - 4.7e-12 46.1 2.7 1.1e-11 44.9 1.9 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF83 UvrD_C_2 PF13538.1 gi|21226292|ref|NP_632214.1| - 2.8e-09 37.0 0.0 1.5e-08 34.7 0.0 2.2 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.1 gi|21226292|ref|NP_632214.1| - 1.1e-07 31.5 0.1 2.1e-07 30.6 0.1 1.4 1 0 0 1 1 1 1 Part of AAA domain Viral_helicase1 PF01443.13 gi|21226292|ref|NP_632214.1| - 4.2e-06 26.4 0.0 0.025 14.1 0.0 3.7 4 0 0 4 4 4 2 Viral (Superfamily 1) RNA helicase DUF2800 PF10926.3 gi|21226292|ref|NP_632214.1| - 1.1e-05 24.7 0.0 1.9e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) AAA_30 PF13604.1 gi|21226292|ref|NP_632214.1| - 7.9e-05 22.3 0.1 0.0035 16.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.1 gi|21226292|ref|NP_632214.1| - 0.034 13.5 0.3 1.4 8.2 0.0 3.1 3 0 0 3 3 3 0 AAA domain DUF4277 PF14104.1 gi|21226293|ref|NP_632215.1| - 2.7e-41 140.3 0.0 5.8e-41 139.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21226293|ref|NP_632215.1| - 6.2e-10 38.9 0.1 6.8e-09 35.5 0.1 2.2 1 1 0 1 1 1 1 Transposase DDE domain Imm42 PF15601.1 gi|21226293|ref|NP_632215.1| - 0.055 12.9 0.3 0.13 11.7 0.2 1.6 1 0 0 1 1 1 0 Immunity protein 42 DUF4044 PF13253.1 gi|21226293|ref|NP_632215.1| - 0.069 12.3 0.3 0.15 11.2 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) N6_N4_Mtase PF01555.13 gi|21226295|ref|NP_632217.1| - 8.9e-34 116.9 1.9 8.9e-34 116.9 1.3 3.0 2 1 0 2 2 2 1 DNA methylase Cons_hypoth95 PF03602.10 gi|21226295|ref|NP_632217.1| - 0.014 14.8 0.1 0.53 9.6 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical protein 95 DUF4375 PF14300.1 gi|21226296|ref|NP_632218.1| - 0.032 14.2 0.2 0.045 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) C5-epim_C PF06662.8 gi|21226296|ref|NP_632218.1| - 0.14 11.3 0.5 0.2 10.9 0.4 1.3 1 1 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus ResIII PF04851.10 gi|21226297|ref|NP_632219.1| - 2e-08 34.2 0.4 2e-08 34.2 0.2 2.6 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|21226297|ref|NP_632219.1| - 0.00017 21.1 0.0 0.00027 20.4 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_10 PF12846.2 gi|21226298|ref|NP_632220.1| - 2.2e-10 40.4 0.1 2.7e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 AAA-like domain Swi3 PF07962.7 gi|21226298|ref|NP_632220.1| - 0.013 15.0 0.3 0.097 12.3 0.0 2.5 2 1 0 2 2 2 0 Replication Fork Protection Component Swi3 DUF87 PF01935.12 gi|21226298|ref|NP_632220.1| - 0.022 14.5 0.2 0.022 14.5 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF87 PFO_beta_C PF12367.3 gi|21226298|ref|NP_632220.1| - 0.19 11.6 2.9 0.38 10.6 0.2 2.6 1 1 1 2 2 2 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DsrD PF08679.6 gi|21226298|ref|NP_632220.1| - 0.21 11.6 2.8 1.8 8.6 0.1 3.1 2 1 1 3 3 3 0 Dissimilatory sulfite reductase D (DsrD) NurA PF09376.5 gi|21226299|ref|NP_632221.1| - 2e-33 115.8 1.4 2.5e-33 115.5 1.0 1.1 1 0 0 1 1 1 1 NurA domain zf-dskA_traR PF01258.12 gi|21226299|ref|NP_632221.1| - 0.1 12.3 0.3 0.2 11.3 0.2 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Rep_fac-A_C PF08646.5 gi|21226299|ref|NP_632221.1| - 0.11 12.1 1.4 0.27 10.9 0.3 2.0 2 0 0 2 2 2 0 Replication factor-A C terminal domain AAA_4 PF04326.9 gi|21226300|ref|NP_632222.1| - 1.1e-17 64.3 0.1 3.3e-17 62.7 0.0 1.8 1 0 0 1 1 1 1 Divergent AAA domain HATPase_c_4 PF13749.1 gi|21226300|ref|NP_632222.1| - 1.6e-17 63.0 0.0 3.5e-17 61.9 0.0 1.6 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HTH_24 PF13412.1 gi|21226300|ref|NP_632222.1| - 2.1e-10 39.8 3.4 3.3e-10 39.1 1.8 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21226300|ref|NP_632222.1| - 3.1e-06 27.4 0.1 7.4e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_AsnC-type PF13404.1 gi|21226300|ref|NP_632222.1| - 2.6e-05 23.6 0.3 6.4e-05 22.4 0.2 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Rrf2 PF02082.15 gi|21226300|ref|NP_632222.1| - 0.00066 19.7 0.1 0.0021 18.1 0.1 1.8 1 0 0 1 1 1 1 Transcriptional regulator MarR PF01047.17 gi|21226300|ref|NP_632222.1| - 0.00097 18.8 0.4 0.0026 17.4 0.3 1.8 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.11 gi|21226300|ref|NP_632222.1| - 0.0014 18.1 1.5 0.0051 16.3 1.1 2.0 1 1 0 1 1 1 1 LexA DNA binding domain TrmB PF01978.14 gi|21226300|ref|NP_632222.1| - 0.0015 18.1 0.2 0.0056 16.3 0.1 2.0 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|21226300|ref|NP_632222.1| - 0.0028 17.2 0.9 0.0092 15.6 0.6 1.9 1 0 0 1 1 1 1 HTH domain FaeA PF04703.7 gi|21226300|ref|NP_632222.1| - 0.026 14.6 0.1 0.05 13.7 0.1 1.5 1 0 0 1 1 1 0 FaeA-like protein Fe_dep_repress PF01325.14 gi|21226300|ref|NP_632222.1| - 0.067 13.1 0.4 0.32 10.9 0.1 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.2 gi|21226300|ref|NP_632222.1| - 0.11 12.2 0.1 0.26 10.9 0.1 1.6 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.2 gi|21226300|ref|NP_632222.1| - 0.14 11.9 0.0 0.5 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_10 PF04967.7 gi|21226300|ref|NP_632222.1| - 0.17 11.5 0.6 0.8 9.3 0.1 2.4 2 0 0 2 2 2 0 HTH DNA binding domain Unstab_antitox PF09720.5 gi|21226301|ref|NP_632223.1| - 0.046 13.4 0.2 0.069 12.8 0.1 1.4 1 1 0 1 1 1 0 Putative addiction module component YusW PF14039.1 gi|21226301|ref|NP_632223.1| - 0.083 13.1 0.1 0.089 13.0 0.1 1.1 1 0 0 1 1 1 0 YusW-like protein DUF2283 PF10049.4 gi|21226303|ref|NP_632225.1| - 2.3e-11 43.3 4.9 3.6e-11 42.7 2.8 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2283) DUF3908 PF13048.1 gi|21226303|ref|NP_632225.1| - 0.03 14.3 1.5 0.039 13.9 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3908) UPF0150 PF03681.10 gi|21226304|ref|NP_632226.1| - 1.3e-15 56.7 1.1 1.6e-15 56.4 0.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|21226304|ref|NP_632226.1| - 0.035 13.6 0.0 0.038 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) DUF1016 PF06250.6 gi|21226305|ref|NP_632227.1| - 2.4e-135 450.6 3.9 2.7e-135 450.4 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1016) Acetyltransf_7 PF13508.1 gi|21226306|ref|NP_632228.1| - 0.0038 17.3 0.2 0.01 15.9 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain HATPase_c_4 PF13749.1 gi|21226307|ref|NP_632229.1| - 6.5e-05 22.6 0.0 9.7e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HATPase_c_4 PF13749.1 gi|21226308|ref|NP_632230.1| - 7.5e-10 38.4 0.0 1.7e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HTH_DeoR PF08220.7 gi|21226308|ref|NP_632230.1| - 0.0072 15.8 0.1 0.012 15.1 0.1 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.1 gi|21226308|ref|NP_632230.1| - 0.032 13.6 0.1 0.066 12.6 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|21226308|ref|NP_632230.1| - 0.036 13.7 0.1 0.05 13.3 0.1 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB PIN PF01850.16 gi|21226309|ref|NP_632231.1| - 1.5e-10 41.4 0.0 6.2e-10 39.4 0.0 1.8 1 1 0 1 1 1 1 PIN domain PIN_3 PF13470.1 gi|21226309|ref|NP_632231.1| - 0.0027 18.3 0.0 0.0042 17.7 0.0 1.3 1 0 0 1 1 1 1 PIN domain DUF4325 PF14213.1 gi|21226310|ref|NP_632232.1| - 2e-19 69.0 0.1 3.4e-19 68.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4325) LigD_N PF13298.1 gi|21226311|ref|NP_632233.1| - 2.6e-41 139.9 0.0 3.3e-41 139.6 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) Rubrerythrin PF02915.12 gi|21226312|ref|NP_632234.1| - 9.3e-07 29.2 0.8 9.6e-07 29.1 0.5 1.0 1 0 0 1 1 1 1 Rubrerythrin Ferritin_2 PF13668.1 gi|21226312|ref|NP_632234.1| - 0.0047 16.8 0.1 0.0047 16.8 0.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain COQ7 PF03232.8 gi|21226312|ref|NP_632234.1| - 0.0095 15.4 0.2 0.011 15.2 0.1 1.0 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 DUF2383 PF09537.5 gi|21226312|ref|NP_632234.1| - 0.01 16.0 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2383) Mn_catalase PF05067.7 gi|21226312|ref|NP_632234.1| - 0.04 12.6 0.3 0.043 12.5 0.2 1.0 1 0 0 1 1 1 0 Manganese containing catalase Ferritin-like PF12902.2 gi|21226312|ref|NP_632234.1| - 0.12 12.0 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Ferritin-like Peptidase_C1 PF00112.18 gi|21226313|ref|NP_632235.1| - 1.2e-29 103.7 0.0 2.1e-29 103.0 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.15 gi|21226313|ref|NP_632235.1| - 7e-09 35.3 3.8 7e-09 35.3 2.6 3.9 3 1 1 4 4 4 2 PKD domain Peptidase_C1_2 PF03051.10 gi|21226313|ref|NP_632235.1| - 0.00018 20.1 0.3 0.026 13.0 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Pcc1 PF09341.5 gi|21226314|ref|NP_632236.1| - 0.012 15.6 0.1 0.018 15.0 0.0 1.3 1 1 0 1 1 1 0 Transcription factor Pcc1 Cas_Csy3 PF09615.5 gi|21226314|ref|NP_632236.1| - 0.038 13.0 0.0 0.039 13.0 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy3) Arc PF03869.9 gi|21226314|ref|NP_632236.1| - 0.14 11.8 0.5 0.78 9.4 0.1 2.0 2 0 0 2 2 2 0 Arc-like DNA binding domain DHH PF01368.15 gi|21226315|ref|NP_632237.1| - 1.8e-16 60.1 0.1 3.1e-16 59.3 0.1 1.4 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|21226315|ref|NP_632237.1| - 6.5e-13 48.1 0.3 2.4e-12 46.3 0.2 2.1 1 0 0 1 1 1 1 DHHA1 domain Lactonase PF10282.4 gi|21226316|ref|NP_632238.1| - 1.5e-16 60.4 7.4 4.7e-07 29.2 0.2 4.1 1 1 2 4 4 4 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21226316|ref|NP_632238.1| - 1.5e-11 43.2 7.3 2.7e-06 25.9 0.5 3.1 1 1 2 3 3 3 3 Cytochrome D1 heme domain Arylesterase PF01731.15 gi|21226316|ref|NP_632238.1| - 7.3e-08 32.2 9.6 4.7 7.2 0.0 6.3 1 1 5 6 6 6 4 Arylesterase SGL PF08450.7 gi|21226316|ref|NP_632238.1| - 1.5e-07 31.0 11.1 0.0021 17.4 0.6 4.1 2 1 4 6 6 6 5 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|21226316|ref|NP_632238.1| - 4.1e-05 23.3 23.2 1.2 9.2 0.1 7.7 7 0 0 7 7 7 4 NHL repeat PD40 PF07676.7 gi|21226316|ref|NP_632238.1| - 7.3e-05 22.3 2.1 46 3.8 0.0 6.1 6 0 0 6 6 6 0 WD40-like Beta Propeller Repeat Str_synth PF03088.11 gi|21226316|ref|NP_632238.1| - 0.00012 22.0 0.5 25 4.9 0.0 5.7 4 1 2 6 6 6 0 Strictosidine synthase DUF3312 PF11768.3 gi|21226316|ref|NP_632238.1| - 0.00037 18.8 1.3 0.036 12.2 0.2 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF3312) P_proprotein PF01483.15 gi|21226316|ref|NP_632238.1| - 0.0068 16.1 1.5 28 4.5 0.0 4.8 4 1 1 5 5 5 0 Proprotein convertase P-domain Big_3_4 PF13754.1 gi|21226318|ref|NP_632240.1| - 2.4e-05 24.5 3.6 0.0001 22.5 0.5 2.9 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 3) He_PIG PF05345.7 gi|21226318|ref|NP_632240.1| - 0.0021 18.0 0.8 0.011 15.7 0.1 2.5 3 0 0 3 3 3 1 Putative Ig domain Big_3_4 PF13754.1 gi|21226320|ref|NP_632242.1| - 5.9e-12 45.7 12.2 0.0038 17.5 0.1 6.4 6 0 0 6 6 6 3 Bacterial Ig-like domain (group 3) Big_3_2 PF12245.3 gi|21226320|ref|NP_632242.1| - 1.7e-06 27.4 1.4 0.2 11.2 0.0 4.1 4 0 0 4 4 4 3 Bacterial Ig-like domain (group 3) SWM_repeat PF13753.1 gi|21226320|ref|NP_632242.1| - 1.8e-05 23.9 10.9 0.00057 19.0 0.1 3.1 2 1 1 3 3 3 3 Putative flagellar system-associated repeat COG2 PF06148.6 gi|21226321|ref|NP_632243.1| - 7e-05 22.7 0.1 0.00015 21.5 0.1 1.5 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF2303 PF10065.4 gi|21226321|ref|NP_632243.1| - 0.066 12.0 0.2 0.11 11.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) DUF4559 PF15112.1 gi|21226321|ref|NP_632243.1| - 0.09 11.9 3.2 0.15 11.2 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Glucos_trans_II PF14264.1 gi|21226322|ref|NP_632244.1| - 0.019 14.0 0.3 0.02 13.8 0.2 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII Grp1_Fun34_YaaH PF01184.14 gi|21226322|ref|NP_632244.1| - 0.048 12.9 1.2 0.05 12.9 0.8 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Alg6_Alg8 PF03155.10 gi|21226322|ref|NP_632244.1| - 0.15 10.8 1.7 0.18 10.6 1.2 1.0 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family DUF2101 PF09874.4 gi|21226322|ref|NP_632244.1| - 0.23 10.9 2.7 0.27 10.6 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) DUF843 PF05814.6 gi|21226322|ref|NP_632244.1| - 5.2 6.9 5.7 7.2 6.4 4.0 1.2 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF843) Radical_SAM PF04055.16 gi|21226323|ref|NP_632245.1| - 5.7e-13 49.3 0.0 1.5e-12 48.0 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily HHH_3 PF12836.2 gi|21226323|ref|NP_632245.1| - 0.0013 18.6 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif PsbU PF06514.6 gi|21226323|ref|NP_632245.1| - 0.11 12.4 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) Thi4 PF01946.12 gi|21226324|ref|NP_632246.1| - 3.4e-81 271.6 0.2 3.9e-81 271.4 0.1 1.0 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.2 gi|21226324|ref|NP_632246.1| - 2.6e-06 26.8 0.4 4.5e-06 25.9 0.3 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|21226324|ref|NP_632246.1| - 7.5e-06 25.8 0.5 1.9e-05 24.5 0.3 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|21226324|ref|NP_632246.1| - 1.4e-05 24.1 2.2 0.00018 20.4 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|21226324|ref|NP_632246.1| - 7.4e-05 22.7 0.9 9.8e-05 22.3 0.6 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|21226324|ref|NP_632246.1| - 7.8e-05 21.7 2.0 0.0054 15.6 0.6 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21226324|ref|NP_632246.1| - 0.00051 18.6 0.7 0.001 17.5 0.7 1.3 1 1 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.14 gi|21226324|ref|NP_632246.1| - 0.0019 17.3 0.2 0.0028 16.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.17 gi|21226324|ref|NP_632246.1| - 0.028 13.2 0.8 0.044 12.6 0.6 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|21226324|ref|NP_632246.1| - 0.034 14.5 0.4 0.086 13.2 0.3 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21226324|ref|NP_632246.1| - 0.085 11.7 0.8 0.13 11.1 0.2 1.5 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_7 PF13241.1 gi|21226324|ref|NP_632246.1| - 0.11 12.7 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding META PF03724.11 gi|21226325|ref|NP_632247.1| - 1.4e-14 53.7 0.0 2e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 META domain Lipocalin_4 PF13648.1 gi|21226325|ref|NP_632247.1| - 0.016 15.8 0.0 0.025 15.2 0.0 1.3 1 0 0 1 1 1 0 Lipocalin-like domain OAD_gamma PF04277.8 gi|21226325|ref|NP_632247.1| - 0.16 12.3 1.2 1.1 9.7 0.8 2.1 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TOBE PF03459.12 gi|21226326|ref|NP_632248.1| - 4.2e-20 71.6 0.0 4.5e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.5 gi|21226326|ref|NP_632248.1| - 0.059 13.3 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 TOBE domain TIR_2 PF13676.1 gi|21226327|ref|NP_632249.1| - 2.9e-13 49.8 0.0 4.8e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 TIR domain CpXC PF14353.1 gi|21226327|ref|NP_632249.1| - 0.0012 18.7 0.6 0.0069 16.3 0.6 2.0 1 1 1 2 2 2 2 CpXC protein Cys_rich_CPXG PF14255.1 gi|21226327|ref|NP_632249.1| - 0.0093 15.7 1.7 0.049 13.4 0.1 2.3 2 0 0 2 2 2 1 Cysteine-rich CPXCG PyrI_C PF02748.10 gi|21226327|ref|NP_632249.1| - 0.013 14.9 3.4 0.66 9.4 0.2 2.3 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF866 PF05907.8 gi|21226327|ref|NP_632249.1| - 0.022 14.2 0.1 0.034 13.6 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) zf-ribbon_3 PF13248.1 gi|21226327|ref|NP_632249.1| - 0.086 12.0 2.6 1.1 8.5 2.1 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zf-Di19 PF05605.7 gi|21226327|ref|NP_632249.1| - 0.092 12.8 2.4 0.59 10.3 0.1 2.6 3 0 0 3 3 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_5 PF13719.1 gi|21226327|ref|NP_632249.1| - 0.12 12.0 0.1 3.5 7.2 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|21226327|ref|NP_632249.1| - 0.12 12.6 0.5 0.31 11.3 0.3 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-FCS PF06467.9 gi|21226327|ref|NP_632249.1| - 0.12 12.0 0.4 12 5.6 0.0 2.3 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Mu-like_Com PF10122.4 gi|21226327|ref|NP_632249.1| - 0.15 11.1 0.2 0.83 8.7 0.0 2.1 2 0 0 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_2 PF13240.1 gi|21226327|ref|NP_632249.1| - 0.15 11.5 3.2 1.1 8.7 0.4 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-CHCC PF10276.4 gi|21226327|ref|NP_632249.1| - 0.21 11.4 1.6 4.1 7.3 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger domain zf-C4_ClpX PF06689.8 gi|21226327|ref|NP_632249.1| - 0.49 9.9 2.4 6.8 6.2 1.0 3.0 2 1 0 2 2 2 0 ClpX C4-type zinc finger zf-BED PF02892.10 gi|21226327|ref|NP_632249.1| - 0.52 10.1 5.2 1.6 8.5 0.1 2.6 2 1 1 3 3 3 0 BED zinc finger zinc_ribbon_6 PF14599.1 gi|21226329|ref|NP_632251.1| - 0.19 11.5 1.4 0.89 9.3 1.0 1.9 1 1 0 1 1 1 0 Zinc-ribbon Zn-ribbon_8 PF09723.5 gi|21226329|ref|NP_632251.1| - 0.26 11.2 3.5 0.36 10.8 2.4 1.2 1 0 0 1 1 1 0 Zinc ribbon domain DUF2795 PF11387.3 gi|21226330|ref|NP_632252.1| - 1.9e-19 69.2 0.2 2.3e-19 68.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DDE_Tnp_2 PF04693.7 gi|21226330|ref|NP_632252.1| - 0.085 11.8 0.0 0.096 11.6 0.0 1.0 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 DUF3461 PF11944.3 gi|21226330|ref|NP_632252.1| - 0.09 12.6 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3461) Na_Ca_ex PF01699.19 gi|21226332|ref|NP_632254.1| - 1.4e-57 193.2 37.5 2.5e-30 104.9 8.2 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein UPF0233 PF06781.7 gi|21226332|ref|NP_632254.1| - 0.1 12.1 0.7 3.2 7.4 0.4 2.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0233) CTP_transf_1 PF01148.15 gi|21226333|ref|NP_632255.1| - 3.6e-11 43.2 20.2 8.7e-11 41.9 5.6 2.4 1 1 1 2 2 2 2 Cytidylyltransferase family DUF1469 PF07332.6 gi|21226333|ref|NP_632255.1| - 0.019 14.7 0.1 0.019 14.7 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1469) Glyoxalase_2 PF12681.2 gi|21226334|ref|NP_632256.1| - 9.3e-12 45.5 0.0 1.1e-11 45.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|21226334|ref|NP_632256.1| - 0.0032 17.4 0.0 0.0054 16.7 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily tRNA-synt_2c PF01411.14 gi|21226335|ref|NP_632257.1| - 1.7e-14 53.0 0.0 2.8e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|21226335|ref|NP_632257.1| - 5.5e-13 48.5 0.4 9.6e-13 47.7 0.3 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Nudix_N PF12535.3 gi|21226335|ref|NP_632257.1| - 0.016 14.6 0.5 0.054 12.9 0.0 2.0 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal NosD PF05048.8 gi|21226336|ref|NP_632258.1| - 1.5e-36 125.7 8.9 1.5e-36 125.7 6.2 2.1 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226336|ref|NP_632258.1| - 2.1e-08 34.1 13.6 2.1e-08 34.1 9.4 2.6 2 1 0 2 2 2 1 Right handed beta helix region DUF948 PF06103.6 gi|21226337|ref|NP_632259.1| - 0.0092 15.8 2.9 2.5 8.0 0.1 3.8 3 1 0 3 3 3 1 Bacterial protein of unknown function (DUF948) ATG16 PF08614.6 gi|21226337|ref|NP_632259.1| - 0.058 13.2 27.8 0.73 9.6 9.1 2.9 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) COMP PF11598.3 gi|21226337|ref|NP_632259.1| - 0.2 11.7 0.2 0.2 11.7 0.1 3.3 4 0 0 4 4 4 0 Cartilage oligomeric matrix protein DUF2730 PF10805.3 gi|21226337|ref|NP_632259.1| - 0.71 9.6 0.0 0.71 9.6 0.0 4.1 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) DUF1664 PF07889.7 gi|21226337|ref|NP_632259.1| - 0.71 9.6 5.0 1 9.2 0.4 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) Atg14 PF10186.4 gi|21226337|ref|NP_632259.1| - 1.6 7.5 24.7 0.08 11.8 3.0 2.8 2 1 1 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 Laminin_II PF06009.7 gi|21226337|ref|NP_632259.1| - 4.4 7.0 15.7 7.6 6.2 0.1 4.0 3 1 1 4 4 4 0 Laminin Domain II Fib_alpha PF08702.5 gi|21226337|ref|NP_632259.1| - 7.1 6.7 13.5 2.3 8.3 1.5 3.5 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family MS_channel PF00924.13 gi|21226338|ref|NP_632260.1| - 2.3e-49 167.5 0.3 2.3e-49 167.5 0.2 1.4 2 0 0 2 2 2 1 Mechanosensitive ion channel TM_helix PF05552.7 gi|21226338|ref|NP_632260.1| - 0.12 12.0 2.2 0.13 11.9 0.3 2.0 2 0 0 2 2 2 0 Conserved TM helix DUF498 PF04430.9 gi|21226339|ref|NP_632261.1| - 1.6e-15 56.5 0.0 1.9e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) AIM24 PF01987.12 gi|21226340|ref|NP_632262.1| - 3e-44 151.0 0.0 3.4e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 dTMP_synthase PF02593.9 gi|21226341|ref|NP_632263.1| - 2.3e-76 255.9 0.0 2.6e-76 255.7 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase Fer4 PF00037.22 gi|21226342|ref|NP_632264.1| - 1.2e-15 56.3 15.4 2.1e-08 33.3 2.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226342|ref|NP_632264.1| - 3.7e-11 42.8 3.2 2.3e-05 24.3 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226342|ref|NP_632264.1| - 6.8e-11 42.2 25.9 1.1e-07 31.9 11.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21226342|ref|NP_632264.1| - 7.4e-11 41.6 31.6 7.5e-08 32.0 12.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226342|ref|NP_632264.1| - 1.1e-10 40.8 13.6 2.5e-05 23.9 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21226342|ref|NP_632264.1| - 3.8e-10 39.0 16.9 4.6e-05 23.0 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21226342|ref|NP_632264.1| - 6.2e-10 39.3 15.1 1.1e-09 38.5 10.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226342|ref|NP_632264.1| - 6.4e-09 36.0 6.5 0.00062 20.0 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain NIL PF09383.5 gi|21226342|ref|NP_632264.1| - 2.3e-07 30.2 0.0 2.7e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 NIL domain Fer4_16 PF13484.1 gi|21226342|ref|NP_632264.1| - 5.1e-07 30.3 12.6 0.00065 20.3 1.6 2.3 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21226342|ref|NP_632264.1| - 6.5e-07 29.1 15.2 0.0026 17.5 2.0 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226342|ref|NP_632264.1| - 7.1e-07 29.5 14.7 6.7e-05 23.2 1.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226342|ref|NP_632264.1| - 1.5e-06 28.4 13.5 0.0026 18.0 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|21226342|ref|NP_632264.1| - 3.7e-06 26.8 16.9 0.0007 19.7 2.5 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21226342|ref|NP_632264.1| - 6.6e-05 23.1 23.3 0.011 16.2 3.9 2.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21226342|ref|NP_632264.1| - 0.00021 21.8 15.6 0.063 13.8 3.1 2.8 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|21226342|ref|NP_632264.1| - 0.0017 18.1 7.9 0.0039 17.0 5.5 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain DUF211 PF02680.9 gi|21226342|ref|NP_632264.1| - 0.12 12.1 0.2 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized ArCR, COG1888 c-SKI_SMAD_bind PF08782.5 gi|21226342|ref|NP_632264.1| - 4.4 7.5 9.9 8.9 6.5 0.4 2.2 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Fer4_19 PF06902.6 gi|21226342|ref|NP_632264.1| - 5.9 6.8 9.1 13 5.6 6.3 1.8 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster DUF39 PF01837.11 gi|21226343|ref|NP_632265.1| - 3.1e-149 496.2 0.2 4.1e-149 495.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF39 CBS PF00571.23 gi|21226343|ref|NP_632265.1| - 7.4e-26 89.6 0.1 7e-12 44.9 0.0 2.6 2 0 0 2 2 2 2 CBS domain CTP_transf_2 PF01467.21 gi|21226344|ref|NP_632266.1| - 3.1e-19 69.5 0.0 4.4e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|21226344|ref|NP_632266.1| - 0.048 13.2 0.1 0.14 11.7 0.1 1.7 1 1 0 2 2 2 0 FAD synthetase Urm1 PF09138.6 gi|21226344|ref|NP_632266.1| - 0.05 13.7 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) Aminotran_1_2 PF00155.16 gi|21226345|ref|NP_632267.1| - 6.5e-66 222.7 0.0 7.4e-66 222.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|21226345|ref|NP_632267.1| - 0.0051 15.1 0.0 0.008 14.5 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|21226345|ref|NP_632267.1| - 0.047 12.4 0.0 0.068 11.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V Peptidase_S8 PF00082.17 gi|21226345|ref|NP_632267.1| - 0.088 11.9 0.0 0.12 11.4 0.0 1.5 1 1 0 1 1 1 0 Subtilase family Rsbr_N PF08678.5 gi|21226345|ref|NP_632267.1| - 0.13 12.1 0.0 2.6 7.9 0.0 2.4 2 1 1 3 3 3 0 Rsbr N terminal DMRL_synthase PF00885.14 gi|21226346|ref|NP_632268.1| - 8.3e-33 113.0 0.1 9e-33 112.9 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.14 gi|21226347|ref|NP_632269.1| - 3e-21 75.5 0.1 3.4e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DUF2428 PF10350.4 gi|21226347|ref|NP_632269.1| - 0.11 11.4 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative death-receptor fusion protein (DUF2428) DUF3667 PF12412.3 gi|21226347|ref|NP_632269.1| - 0.14 11.4 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) Aminotran_5 PF00266.14 gi|21226348|ref|NP_632270.1| - 1.2e-41 142.7 0.0 1.5e-41 142.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|21226348|ref|NP_632270.1| - 0.0049 16.0 0.0 0.01 14.9 0.0 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|21226348|ref|NP_632270.1| - 0.0053 15.8 0.1 0.013 14.5 0.0 1.6 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family CBS PF00571.23 gi|21226349|ref|NP_632271.1| - 1.8e-19 69.2 4.4 4.4e-11 42.3 0.4 2.5 2 0 0 2 2 2 2 CBS domain HTH_3 PF01381.17 gi|21226349|ref|NP_632271.1| - 1.7e-15 56.5 0.4 1.4e-14 53.6 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.1 gi|21226349|ref|NP_632271.1| - 2.9e-13 49.7 0.1 9e-13 48.2 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|21226349|ref|NP_632271.1| - 9.2e-12 44.8 0.1 2.8e-11 43.3 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|21226349|ref|NP_632271.1| - 2.7e-05 23.6 0.1 5.5e-05 22.7 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21226349|ref|NP_632271.1| - 3.2e-05 24.0 0.0 0.00022 21.3 0.0 2.2 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|21226349|ref|NP_632271.1| - 0.00033 20.3 0.1 0.0016 18.2 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21226349|ref|NP_632271.1| - 0.0067 15.7 0.4 0.1 12.0 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|21226349|ref|NP_632271.1| - 0.036 13.7 0.0 0.21 11.2 0.0 2.2 2 0 0 2 2 2 0 MarR family LacI PF00356.16 gi|21226349|ref|NP_632271.1| - 0.083 12.5 2.3 4.5 6.9 0.1 3.0 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR PF01047.17 gi|21226349|ref|NP_632271.1| - 0.089 12.5 0.2 0.74 9.5 0.0 2.4 3 0 0 3 3 3 0 MarR family HTH_23 PF13384.1 gi|21226349|ref|NP_632271.1| - 0.15 11.7 0.0 6 6.6 0.0 2.7 2 0 0 2 2 2 0 Homeodomain-like domain AAA PF00004.24 gi|21226350|ref|NP_632272.1| - 1.7e-97 322.6 0.0 5.5e-48 162.5 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|21226350|ref|NP_632272.1| - 3e-25 87.9 0.0 2.3e-24 85.1 0.0 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.12 gi|21226350|ref|NP_632272.1| - 9.9e-19 66.7 1.6 4e-18 64.7 0.2 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.1 gi|21226350|ref|NP_632272.1| - 9.2e-15 55.0 0.0 8.9e-07 29.0 0.0 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21226350|ref|NP_632272.1| - 1.9e-14 53.9 0.1 8.3e-05 22.7 0.0 4.4 2 2 0 2 2 2 2 AAA domain AAA_2 PF07724.9 gi|21226350|ref|NP_632272.1| - 4.8e-14 52.6 0.0 6.3e-08 32.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|21226350|ref|NP_632272.1| - 5.9e-14 51.6 0.0 4.9e-06 25.7 0.0 2.5 2 1 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 gi|21226350|ref|NP_632272.1| - 4.5e-13 49.2 0.0 5.4e-07 29.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|21226350|ref|NP_632272.1| - 2.4e-12 46.7 0.8 8.6e-05 22.2 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21226350|ref|NP_632272.1| - 1.3e-11 45.4 0.0 1.1e-05 26.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|21226350|ref|NP_632272.1| - 3.9e-11 42.9 0.0 2.2e-05 24.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.7 gi|21226350|ref|NP_632272.1| - 1.3e-10 40.7 0.0 2.7e-05 23.3 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin TIP49 PF06068.8 gi|21226350|ref|NP_632272.1| - 3.4e-10 39.2 0.0 0.00034 19.4 0.0 2.3 2 0 0 2 2 2 2 TIP49 C-terminus IstB_IS21 PF01695.12 gi|21226350|ref|NP_632272.1| - 4.5e-10 39.2 0.1 0.00047 19.6 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21226350|ref|NP_632272.1| - 9.5e-10 38.1 1.6 0.0011 18.7 0.1 3.0 2 0 0 2 2 2 2 Part of AAA domain NACHT PF05729.7 gi|21226350|ref|NP_632272.1| - 2.2e-09 37.1 0.2 0.058 13.0 0.0 4.2 3 1 1 4 4 4 2 NACHT domain AAA_25 PF13481.1 gi|21226350|ref|NP_632272.1| - 1.3e-08 34.5 2.5 0.0014 18.0 0.0 3.4 2 1 1 3 3 3 2 AAA domain Sigma54_activat PF00158.21 gi|21226350|ref|NP_632272.1| - 2.8e-08 33.4 0.0 0.0055 16.1 0.0 3.4 2 2 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|21226350|ref|NP_632272.1| - 1.1e-07 31.2 0.5 0.012 14.7 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_18 PF13238.1 gi|21226350|ref|NP_632272.1| - 1.3e-07 31.9 0.0 0.021 15.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.22 gi|21226350|ref|NP_632272.1| - 2.1e-07 31.3 0.0 0.0074 16.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RNA_helicase PF00910.17 gi|21226350|ref|NP_632272.1| - 5.4e-07 29.7 0.0 0.043 13.9 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.1 gi|21226350|ref|NP_632272.1| - 5.4e-07 29.7 0.0 0.017 15.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain Sigma54_activ_2 PF14532.1 gi|21226350|ref|NP_632272.1| - 1e-06 28.8 0.0 0.059 13.4 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.12 gi|21226350|ref|NP_632272.1| - 2.5e-06 26.5 0.0 0.017 13.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_24 PF13479.1 gi|21226350|ref|NP_632272.1| - 2.6e-06 27.1 0.0 0.024 14.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain Arch_ATPase PF01637.13 gi|21226350|ref|NP_632272.1| - 1.2e-05 25.1 0.0 0.24 11.0 0.0 3.6 2 2 1 3 3 3 2 Archaeal ATPase PhoH PF02562.11 gi|21226350|ref|NP_632272.1| - 1.3e-05 24.5 0.6 0.24 10.6 0.0 3.4 4 0 0 4 4 2 2 PhoH-like protein NB-ARC PF00931.17 gi|21226350|ref|NP_632272.1| - 2.1e-05 23.5 0.0 0.088 11.6 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain KaiC PF06745.8 gi|21226350|ref|NP_632272.1| - 2.3e-05 23.6 0.3 0.6 9.1 0.0 3.4 2 1 0 3 3 3 2 KaiC AAA_3 PF07726.6 gi|21226350|ref|NP_632272.1| - 4.5e-05 23.0 0.0 0.32 10.5 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ResIII PF04851.10 gi|21226350|ref|NP_632272.1| - 0.00013 21.8 0.0 0.19 11.5 0.0 2.3 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DUF2075 PF09848.4 gi|21226350|ref|NP_632272.1| - 0.00015 20.8 0.0 0.41 9.5 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.1 gi|21226350|ref|NP_632272.1| - 0.00017 21.2 0.0 0.35 10.3 0.0 2.4 2 1 0 2 2 2 2 AAA domain SKI PF01202.17 gi|21226350|ref|NP_632272.1| - 0.00052 19.9 0.1 1.5 8.6 0.0 3.1 3 0 0 3 3 3 1 Shikimate kinase UPF0079 PF02367.12 gi|21226350|ref|NP_632272.1| - 0.00056 19.5 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 DUF815 PF05673.8 gi|21226350|ref|NP_632272.1| - 0.0009 18.2 0.0 1.2 7.9 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Guanylate_kin PF00625.16 gi|21226350|ref|NP_632272.1| - 0.00096 18.6 0.2 9.9 5.5 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase Bac_DnaA PF00308.13 gi|21226350|ref|NP_632272.1| - 0.00097 18.8 0.0 1.5 8.4 0.0 2.9 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_30 PF13604.1 gi|21226350|ref|NP_632272.1| - 0.0013 18.3 0.0 1.2 8.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain KAP_NTPase PF07693.9 gi|21226350|ref|NP_632272.1| - 0.0021 17.1 0.2 1.4 7.8 0.0 3.3 2 2 2 4 4 4 1 KAP family P-loop domain ATP-synt_ab PF00006.20 gi|21226350|ref|NP_632272.1| - 0.0025 17.3 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain NTPase_1 PF03266.10 gi|21226350|ref|NP_632272.1| - 0.0039 16.9 0.1 4.1 7.0 0.0 3.4 2 1 1 3 3 3 0 NTPase T2SE PF00437.15 gi|21226350|ref|NP_632272.1| - 0.0054 15.6 0.0 3.8 6.3 0.0 2.6 3 0 0 3 3 2 0 Type II/IV secretion system protein AFG1_ATPase PF03969.11 gi|21226350|ref|NP_632272.1| - 0.017 13.9 0.0 2.1 7.0 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase CPT PF07931.7 gi|21226350|ref|NP_632272.1| - 0.018 14.7 0.0 3.5 7.2 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_23 PF13476.1 gi|21226350|ref|NP_632272.1| - 0.024 14.9 0.0 7.5 6.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain Vps4_C PF09336.5 gi|21226350|ref|NP_632272.1| - 0.026 14.4 0.0 8 6.4 0.0 3.1 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain Viral_helicase1 PF01443.13 gi|21226350|ref|NP_632272.1| - 0.036 13.5 0.0 3.1 7.2 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_29 PF13555.1 gi|21226350|ref|NP_632272.1| - 0.053 13.0 0.0 15 5.2 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain cobW PF02492.14 gi|21226350|ref|NP_632272.1| - 0.07 12.5 0.1 13 5.1 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Torsin PF06309.6 gi|21226350|ref|NP_632272.1| - 0.077 12.8 0.0 6.9 6.5 0.0 2.4 2 0 0 2 2 2 0 Torsin PduV-EutP PF10662.4 gi|21226350|ref|NP_632272.1| - 0.1 12.1 0.0 14 5.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IPT PF01745.11 gi|21226350|ref|NP_632272.1| - 0.11 11.6 0.0 16 4.5 0.0 2.7 3 0 0 3 3 3 0 Isopentenyl transferase KTI12 PF08433.5 gi|21226350|ref|NP_632272.1| - 0.16 11.1 0.0 18 4.4 0.0 2.4 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_10 PF12846.2 gi|21226350|ref|NP_632272.1| - 0.19 11.1 0.7 20 4.5 0.0 2.8 3 0 0 3 3 3 0 AAA-like domain DAP3 PF10236.4 gi|21226350|ref|NP_632272.1| - 0.22 10.4 0.0 19 4.0 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 FMN_red PF03358.10 gi|21226351|ref|NP_632273.1| - 3.9e-17 62.1 0.0 5e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21226351|ref|NP_632273.1| - 8e-05 22.2 0.0 0.00023 20.7 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin-like fold DDE_Tnp_IS66 PF03050.9 gi|21226352|ref|NP_632274.1| - 3.1e-71 239.7 0.0 3.7e-71 239.5 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21226352|ref|NP_632274.1| - 1.2e-09 38.0 3.6 3.2e-09 36.6 2.5 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21226352|ref|NP_632274.1| - 1.2e-06 28.5 2.6 0.017 15.0 0.1 3.1 3 0 0 3 3 3 2 DDE domain p31comet PF06581.7 gi|21226352|ref|NP_632274.1| - 0.015 14.1 0.2 0.026 13.3 0.1 1.3 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding Apolipoprotein PF01442.13 gi|21226352|ref|NP_632274.1| - 0.022 14.3 0.4 0.037 13.5 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain zf-ribbon_3 PF13248.1 gi|21226352|ref|NP_632274.1| - 0.12 11.5 4.6 0.29 10.3 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|21226352|ref|NP_632274.1| - 0.15 11.8 3.2 0.34 10.7 1.5 2.3 2 1 0 2 2 1 0 Double zinc ribbon Takusan PF04822.8 gi|21226352|ref|NP_632274.1| - 0.16 11.7 2.8 0.18 11.6 0.9 1.8 1 1 0 1 1 1 0 Takusan zf-RING_5 PF14634.1 gi|21226352|ref|NP_632274.1| - 0.17 11.6 5.7 1.4 8.7 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21226352|ref|NP_632274.1| - 0.26 10.8 6.5 1 8.9 0.1 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|21226352|ref|NP_632274.1| - 3.4 7.3 6.5 2.9 7.6 1.3 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DnaB_C PF03796.10 gi|21226353|ref|NP_632275.1| - 0.008 15.0 0.0 0.0087 14.9 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AKNA PF12443.3 gi|21226353|ref|NP_632275.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor HTH_45 PF14947.1 gi|21226354|ref|NP_632276.1| - 2.4e-23 81.7 1.0 2.5e-23 81.6 0.7 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.15 gi|21226354|ref|NP_632276.1| - 0.01 15.9 0.1 0.016 15.2 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator AAA PF00004.24 gi|21226355|ref|NP_632277.1| - 1e-10 41.8 0.0 2.6e-10 40.5 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|21226355|ref|NP_632277.1| - 1.8e-09 36.8 0.0 0.00093 17.9 0.0 2.2 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|21226355|ref|NP_632277.1| - 2.1e-07 31.1 0.8 0.0057 16.7 0.0 3.5 2 2 1 3 3 3 2 AAA domain RuvB_N PF05496.7 gi|21226355|ref|NP_632277.1| - 1e-05 24.7 0.0 2.2e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|21226355|ref|NP_632277.1| - 7.8e-05 22.7 0.1 0.00056 19.9 0.0 2.3 2 1 1 3 3 3 1 AAA ATPase domain AAA_14 PF13173.1 gi|21226355|ref|NP_632277.1| - 0.00048 20.0 0.0 0.0011 18.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.1 gi|21226355|ref|NP_632277.1| - 0.01 15.4 0.0 0.041 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain IPT PF01745.11 gi|21226355|ref|NP_632277.1| - 0.013 14.6 0.0 0.04 13.0 0.0 1.8 2 0 0 2 2 2 0 Isopentenyl transferase IstB_IS21 PF01695.12 gi|21226355|ref|NP_632277.1| - 0.015 14.7 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF815 PF05673.8 gi|21226355|ref|NP_632277.1| - 0.029 13.2 0.0 0.044 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Zeta_toxin PF06414.7 gi|21226355|ref|NP_632277.1| - 0.042 12.9 0.0 0.078 12.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_17 PF13207.1 gi|21226355|ref|NP_632277.1| - 0.047 14.5 0.2 0.17 12.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|21226355|ref|NP_632277.1| - 0.05 13.0 0.2 0.39 10.0 0.1 2.2 1 1 1 2 2 2 0 AAA domain DUF258 PF03193.11 gi|21226355|ref|NP_632277.1| - 0.076 12.1 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 RNA_helicase PF00910.17 gi|21226355|ref|NP_632277.1| - 0.11 12.6 0.0 0.27 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase DEAD PF00270.24 gi|21226355|ref|NP_632277.1| - 0.13 11.7 0.0 5.6 6.4 0.0 2.5 3 0 0 3 3 3 0 DEAD/DEAH box helicase PTA_PTB PF01515.14 gi|21226356|ref|NP_632278.1| - 0.00031 19.9 0.0 0.6 9.1 0.0 2.3 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase MtrA PF04208.9 gi|21226357|ref|NP_632279.1| - 1.5e-54 184.1 0.1 1.9e-54 183.7 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrH PF02007.13 gi|21226358|ref|NP_632280.1| - 7.3e-143 474.9 0.2 8.3e-143 474.7 0.1 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit DDE_Tnp_1 PF01609.16 gi|21226360|ref|NP_632282.1| - 6.6e-10 38.8 1.9 1.1e-09 38.1 1.3 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|21226360|ref|NP_632282.1| - 0.0043 16.8 1.0 0.034 13.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|21226360|ref|NP_632282.1| - 0.025 14.2 1.8 0.44 10.1 0.0 3.2 3 0 0 3 3 3 0 Paired amphipathic helix repeat ILVD_EDD PF00920.16 gi|21226361|ref|NP_632283.1| - 2.2e-224 745.7 0.8 2.5e-224 745.5 0.6 1.0 1 0 0 1 1 1 1 Dehydratase family Uroplakin_II PF07353.7 gi|21226361|ref|NP_632283.1| - 0.044 13.1 0.1 0.6 9.4 0.0 2.2 2 0 0 2 2 2 0 Uroplakin II PAS_3 PF08447.6 gi|21226362|ref|NP_632284.1| - 1.4e-50 169.3 2.9 2.4e-16 59.6 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.1 gi|21226362|ref|NP_632284.1| - 1.5e-19 70.3 2.9 4.2e-05 23.8 0.3 3.4 3 0 0 3 3 3 3 PAS domain PAS PF00989.19 gi|21226362|ref|NP_632284.1| - 3.7e-12 46.0 0.3 0.00032 20.4 0.0 3.4 3 0 0 3 3 3 3 PAS fold GAF_2 PF13185.1 gi|21226362|ref|NP_632284.1| - 8.2e-11 42.6 0.0 1.9e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.5 gi|21226362|ref|NP_632284.1| - 7.4e-09 35.6 0.0 0.055 13.5 0.0 4.0 4 0 0 4 4 4 2 PAS fold PAS_11 PF14598.1 gi|21226362|ref|NP_632284.1| - 4.8e-07 29.7 0.0 0.15 12.0 0.0 3.3 3 0 0 3 3 3 2 PAS domain GAF_3 PF13492.1 gi|21226362|ref|NP_632284.1| - 0.00013 22.0 0.0 0.00033 20.7 0.0 1.7 1 0 0 1 1 1 1 GAF domain GAF PF01590.21 gi|21226362|ref|NP_632284.1| - 0.00086 19.4 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 GAF domain MoaE PF02391.12 gi|21226362|ref|NP_632284.1| - 0.0056 16.4 1.6 6.1 6.6 0.0 3.7 4 0 0 4 4 4 1 MoaE protein DUF3237 PF11578.3 gi|21226362|ref|NP_632284.1| - 0.082 12.2 0.0 11 5.3 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3237) Mononeg_mRNAcap PF14318.1 gi|21226362|ref|NP_632284.1| - 0.089 11.8 0.1 4.5 6.2 0.0 2.4 2 0 0 2 2 2 0 Mononegavirales mRNA-capping region V Thr_dehydrat_C PF00585.13 gi|21226362|ref|NP_632284.1| - 0.11 12.1 1.0 6.7 6.3 0.0 3.8 3 1 1 4 4 4 0 C-terminal regulatory domain of Threonine dehydratase Flavodoxin_1 PF00258.20 gi|21226363|ref|NP_632285.1| - 2.3e-14 53.5 0.0 4.6e-14 52.6 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.2 gi|21226363|ref|NP_632285.1| - 9.7e-08 32.1 0.0 1.5e-07 31.5 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.2 gi|21226363|ref|NP_632285.1| - 4.7e-06 26.1 0.0 6.6e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|21226363|ref|NP_632285.1| - 7.1e-05 22.2 0.1 0.0004 19.7 0.1 2.1 1 1 0 1 1 1 1 Flavodoxin DUF1724 PF08350.5 gi|21226364|ref|NP_632286.1| - 8.3e-23 79.7 0.3 2e-22 78.4 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|21226364|ref|NP_632286.1| - 0.0073 16.6 0.1 0.015 15.5 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|21226364|ref|NP_632286.1| - 0.0081 15.8 0.2 0.015 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|21226364|ref|NP_632286.1| - 0.015 14.8 0.5 0.038 13.6 0.4 1.6 1 0 0 1 1 1 0 HTH domain BRCA-2_OB3 PF09104.5 gi|21226364|ref|NP_632286.1| - 0.083 12.6 0.8 3.1 7.6 0.0 2.3 2 0 0 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DUF1699 PF08004.6 gi|21226365|ref|NP_632287.1| - 2.4e-69 230.9 0.9 2.7e-69 230.7 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21226365|ref|NP_632287.1| - 0.032 14.4 0.1 0.059 13.6 0.0 1.4 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|21226365|ref|NP_632287.1| - 0.062 12.8 0.1 8 6.2 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region PKD PF00801.15 gi|21226367|ref|NP_632289.1| - 3.2e-102 334.3 81.9 3.8e-19 68.2 2.9 7.4 7 0 0 7 7 7 7 PKD domain Dockerin_1 PF00404.13 gi|21226367|ref|NP_632289.1| - 1 9.2 4.2 24 4.8 0.3 3.0 2 0 0 2 2 2 0 Dockerin type I repeat DUF1724 PF08350.5 gi|21226368|ref|NP_632290.1| - 1.4e-22 78.9 0.6 3.1e-22 77.8 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) ASL_C2 PF14698.1 gi|21226369|ref|NP_632291.1| - 0.11 12.6 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 Argininosuccinate lyase C-terminal G3P_antiterm PF04309.7 gi|21226370|ref|NP_632292.1| - 0.11 11.5 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Cortexin PF11057.3 gi|21226370|ref|NP_632292.1| - 0.15 11.7 0.9 0.23 11.0 0.6 1.4 1 1 0 1 1 1 0 Cortexin of kidney Inhibitor_I42 PF09394.5 gi|21226371|ref|NP_632293.1| - 1.2e-31 108.9 0.9 2.1e-31 108.0 0.6 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Cytomega_UL20A PF05984.7 gi|21226371|ref|NP_632293.1| - 0.012 15.7 1.0 0.016 15.3 0.2 1.6 2 0 0 2 2 2 0 Cytomegalovirus UL20A protein DUF2615 PF11027.3 gi|21226371|ref|NP_632293.1| - 0.083 12.8 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) Inhibitor_I71 PF12628.2 gi|21226371|ref|NP_632293.1| - 0.087 12.4 0.1 0.24 11.0 0.1 1.7 2 0 0 2 2 2 0 Falstatin, cysteine peptidase inhibitor DUF3316 PF11777.3 gi|21226371|ref|NP_632293.1| - 0.13 12.0 0.9 1.7 8.4 0.4 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3316) HTH_5 PF01022.15 gi|21226374|ref|NP_632296.1| - 6.2e-07 28.9 0.1 1.1e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.5 gi|21226374|ref|NP_632296.1| - 2.7e-05 23.6 0.0 4.8e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|21226374|ref|NP_632296.1| - 0.00011 21.8 0.0 0.00018 21.0 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|21226374|ref|NP_632296.1| - 0.00024 20.7 0.1 0.00044 19.8 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|21226374|ref|NP_632296.1| - 0.00036 20.1 0.0 0.0006 19.4 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.1 gi|21226374|ref|NP_632296.1| - 0.00065 19.9 0.0 0.0013 18.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|21226374|ref|NP_632296.1| - 0.0046 16.7 0.0 0.0075 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain FUR PF01475.14 gi|21226374|ref|NP_632296.1| - 0.0051 16.7 0.2 0.01 15.7 0.1 1.4 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_24 PF13412.1 gi|21226374|ref|NP_632296.1| - 0.0086 15.4 0.1 0.023 14.0 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_7 PF02796.10 gi|21226374|ref|NP_632296.1| - 0.019 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase TetR_N PF00440.18 gi|21226374|ref|NP_632296.1| - 0.021 14.4 0.1 0.11 12.1 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_40 PF14493.1 gi|21226374|ref|NP_632296.1| - 0.023 14.9 0.4 0.05 13.8 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.17 gi|21226374|ref|NP_632296.1| - 0.067 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_9 PF08221.6 gi|21226374|ref|NP_632296.1| - 0.084 12.7 0.0 0.19 11.5 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Rrf2 PF02082.15 gi|21226374|ref|NP_632296.1| - 0.09 12.9 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_23 PF13384.1 gi|21226374|ref|NP_632296.1| - 0.11 12.2 0.0 0.2 11.3 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.1 gi|21226374|ref|NP_632296.1| - 0.13 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix zf-CHY PF05495.7 gi|21226375|ref|NP_632297.1| - 0.092 12.9 0.5 0.2 11.8 0.3 1.5 1 0 0 1 1 1 0 CHY zinc finger Paired_CXXCH_1 PF09699.5 gi|21226375|ref|NP_632297.1| - 0.18 11.3 1.0 0.4 10.2 0.7 1.5 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) TF_Zn_Ribbon PF08271.7 gi|21226375|ref|NP_632297.1| - 1.7 8.0 5.8 2.1 7.7 1.3 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding PLDc_2 PF13091.1 gi|21226376|ref|NP_632298.1| - 4.1e-19 68.5 0.4 5.1e-19 68.2 0.3 1.1 1 0 0 1 1 1 1 PLD-like domain Regulator_TrmB PF11495.3 gi|21226376|ref|NP_632298.1| - 5.2e-07 28.8 0.1 6.6e-07 28.5 0.1 1.0 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB DUF1669 PF07894.7 gi|21226376|ref|NP_632298.1| - 0.00064 19.0 0.2 0.042 13.0 0.1 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1669) Tox-ART-HYE1 PF15634.1 gi|21226376|ref|NP_632298.1| - 0.044 12.7 0.1 0.052 12.5 0.1 1.1 1 0 0 1 1 1 0 HYE1 signature containing ADP-ribosyltransferase DUF1998 PF09369.5 gi|21226377|ref|NP_632299.1| - 3.1e-15 56.5 0.4 7.4e-15 55.2 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.26 gi|21226378|ref|NP_632300.1| - 1.9e-09 37.2 0.1 5.3e-09 35.8 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HhH-GPD PF00730.20 gi|21226379|ref|NP_632301.1| - 2.1e-07 31.1 0.0 2.9e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.4 gi|21226379|ref|NP_632301.1| - 0.0012 18.9 4.9 0.0019 18.3 3.4 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III TPR_6 PF13174.1 gi|21226379|ref|NP_632301.1| - 0.16 12.4 0.2 0.68 10.5 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DNA_methylase PF00145.12 gi|21226380|ref|NP_632302.1| - 4.3e-58 197.0 0.6 1.4e-52 178.9 0.1 2.0 2 0 0 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.5 gi|21226380|ref|NP_632302.1| - 0.025 14.1 0.9 0.074 12.6 0.2 2.1 2 1 0 2 2 2 0 RNA cap guanine-N2 methyltransferase DUF3458 PF11940.3 gi|21226381|ref|NP_632303.1| - 1.7e-64 218.0 0.0 2.2e-64 217.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Peptidase_M1 PF01433.15 gi|21226381|ref|NP_632303.1| - 8.5e-29 100.8 0.0 1.3e-17 64.0 0.0 2.1 2 0 0 2 2 2 2 Peptidase family M1 Peptidase_MA_2 PF13485.1 gi|21226381|ref|NP_632303.1| - 1.4e-12 47.7 0.0 3.2e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 Peptidase MA superfamily DUF1622 PF07784.6 gi|21226382|ref|NP_632304.1| - 1.7e-25 88.4 0.2 2.6e-25 87.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) Class_IIIsignal PF04021.7 gi|21226382|ref|NP_632304.1| - 0.043 13.5 1.6 0.043 13.5 1.1 3.1 4 0 0 4 4 4 0 Class III signal peptide Sdh_cyt PF01127.17 gi|21226382|ref|NP_632304.1| - 0.12 12.1 0.5 0.2 11.4 0.4 1.4 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1622 PF07784.6 gi|21226383|ref|NP_632305.1| - 9e-25 86.1 0.6 1.3e-24 85.6 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) DUF502 PF04367.8 gi|21226383|ref|NP_632305.1| - 0.095 12.4 0.3 0.17 11.6 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF502) PALP PF00291.20 gi|21226384|ref|NP_632306.1| - 1.1e-71 241.5 3.0 1.3e-71 241.3 2.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme zinc_ribbon_2 PF13240.1 gi|21226384|ref|NP_632306.1| - 0.047 13.2 2.5 0.11 12.0 1.7 1.6 1 0 0 1 1 1 0 zinc-ribbon domain tRNA-synt_1 PF00133.17 gi|21226385|ref|NP_632307.1| - 5.2e-57 193.1 0.1 1.9e-41 141.7 0.0 2.9 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|21226385|ref|NP_632307.1| - 3.8e-27 94.9 1.8 3.3e-12 45.7 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|21226385|ref|NP_632307.1| - 1.1e-21 77.1 0.2 2e-21 76.3 0.1 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.14 gi|21226385|ref|NP_632307.1| - 8.3e-10 38.2 0.1 3.1e-06 26.5 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|21226385|ref|NP_632307.1| - 1.5e-07 30.9 0.0 2.8e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.14 gi|21226385|ref|NP_632307.1| - 0.00031 19.6 0.0 0.00087 18.2 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.13 gi|21226385|ref|NP_632307.1| - 0.0057 15.3 0.0 0.012 14.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) CN_hydrolase PF00795.17 gi|21226386|ref|NP_632308.1| - 3.8e-24 85.0 0.0 4.5e-22 78.3 0.0 2.2 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase PvlArgDC PF01862.11 gi|21226388|ref|NP_632310.1| - 1.1e-60 204.0 0.0 1.2e-60 203.8 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DS PF01916.12 gi|21226389|ref|NP_632311.1| - 5.9e-72 242.3 0.1 7.6e-72 241.9 0.1 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase DUF970 PF06153.6 gi|21226389|ref|NP_632311.1| - 0.091 12.7 0.0 0.25 11.3 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF970) ArsR PF09824.4 gi|21226390|ref|NP_632312.1| - 8.7e-78 259.1 0.0 9.9e-78 259.0 0.0 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator DUF387 PF04079.11 gi|21226390|ref|NP_632312.1| - 0.0046 16.3 0.0 0.11 11.8 0.0 2.1 2 0 0 2 2 2 1 Putative transcriptional regulators (Ypuh-like) HTH_20 PF12840.2 gi|21226390|ref|NP_632312.1| - 0.01 15.6 0.0 0.26 11.1 0.0 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain DUF3418 PF11898.3 gi|21226390|ref|NP_632312.1| - 0.08 11.3 0.0 0.083 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Retrotrans_gag PF03732.12 gi|21226390|ref|NP_632312.1| - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Retrotransposon gag protein MarR_2 PF12802.2 gi|21226391|ref|NP_632313.1| - 7.2e-11 41.5 0.1 2.7e-10 39.7 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.1 gi|21226391|ref|NP_632313.1| - 1.8e-10 40.0 0.1 2.9e-09 36.1 0.0 2.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21226391|ref|NP_632313.1| - 5.7e-08 32.9 0.0 1.4e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|21226391|ref|NP_632313.1| - 1.5e-07 31.1 0.7 2.3e-05 24.0 0.0 3.2 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain MarR PF01047.17 gi|21226391|ref|NP_632313.1| - 5.1e-07 29.3 0.2 2.8e-06 26.9 0.0 2.3 3 0 0 3 3 3 1 MarR family HTH_45 PF14947.1 gi|21226391|ref|NP_632313.1| - 1.7e-05 24.5 0.0 3.3e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_3 PF01381.17 gi|21226391|ref|NP_632313.1| - 3.6e-05 23.5 0.1 0.003 17.3 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_11 PF08279.7 gi|21226391|ref|NP_632313.1| - 0.00014 21.4 0.1 0.00032 20.2 0.1 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.15 gi|21226391|ref|NP_632313.1| - 0.0002 21.3 0.0 0.00053 20.0 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.14 gi|21226391|ref|NP_632313.1| - 0.00091 19.1 0.1 0.0036 17.2 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Mnd1 PF03962.10 gi|21226391|ref|NP_632313.1| - 0.0032 17.1 0.6 0.009 15.6 0.0 1.9 2 0 0 2 2 2 1 Mnd1 family HTH_36 PF13730.1 gi|21226391|ref|NP_632313.1| - 0.0055 16.8 0.0 0.017 15.2 0.0 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|21226391|ref|NP_632313.1| - 0.0057 16.2 0.0 0.013 15.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4423 PF14394.1 gi|21226391|ref|NP_632313.1| - 0.0059 16.1 0.1 0.012 15.1 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.12 gi|21226391|ref|NP_632313.1| - 0.012 15.2 0.1 0.029 13.9 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_28 PF13518.1 gi|21226391|ref|NP_632313.1| - 0.018 15.0 0.0 0.082 12.9 0.0 2.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_13 PF11972.3 gi|21226391|ref|NP_632313.1| - 0.019 14.8 0.1 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain GntR PF00392.16 gi|21226391|ref|NP_632313.1| - 0.023 14.1 0.3 0.069 12.5 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family HTH_23 PF13384.1 gi|21226391|ref|NP_632313.1| - 0.024 14.2 0.0 0.075 12.7 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.7 gi|21226391|ref|NP_632313.1| - 0.032 13.8 0.0 0.095 12.2 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.15 gi|21226391|ref|NP_632313.1| - 0.038 13.6 0.0 0.089 12.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21226391|ref|NP_632313.1| - 0.041 13.7 0.0 0.092 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|21226391|ref|NP_632313.1| - 0.044 13.9 0.1 0.083 13.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix EAP30 PF04157.11 gi|21226391|ref|NP_632313.1| - 0.051 12.7 0.0 0.097 11.8 0.0 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family TrmB PF01978.14 gi|21226391|ref|NP_632313.1| - 0.055 13.1 0.1 0.15 11.7 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB KorB PF08535.5 gi|21226391|ref|NP_632313.1| - 0.087 12.9 0.0 0.29 11.3 0.0 1.9 1 0 0 1 1 1 0 KorB domain DUF4364 PF14277.1 gi|21226391|ref|NP_632313.1| - 0.089 12.4 0.1 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) Metallophos_2 PF12850.2 gi|21226392|ref|NP_632314.1| - 1e-25 90.3 0.0 1.3e-25 90.0 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21226392|ref|NP_632314.1| - 9.6e-05 21.8 0.2 0.25 10.7 0.1 2.2 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|21226395|ref|NP_632317.1| - 2.9e-07 30.2 0.1 0.00053 19.7 0.0 2.6 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain Na_H_Exchanger PF00999.16 gi|21226396|ref|NP_632318.1| - 8.5e-42 143.0 44.3 1.1e-41 142.6 30.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|21226396|ref|NP_632318.1| - 1.3e-26 92.8 0.2 2.5e-26 91.9 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|21226396|ref|NP_632318.1| - 4.1e-10 39.1 0.4 1.2e-09 37.5 0.1 2.0 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|21226396|ref|NP_632318.1| - 1.5e-06 28.3 0.4 4.3e-06 26.9 0.1 1.8 2 0 0 2 2 2 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|21226396|ref|NP_632318.1| - 3.1e-05 23.4 0.3 5.9e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_10 PF13460.1 gi|21226396|ref|NP_632318.1| - 0.00054 20.0 0.1 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding ApbA PF02558.11 gi|21226396|ref|NP_632318.1| - 0.00098 18.5 0.1 0.0017 17.7 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|21226396|ref|NP_632318.1| - 0.0026 17.6 0.1 0.0051 16.6 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Saccharop_dh PF03435.13 gi|21226396|ref|NP_632318.1| - 0.0042 16.1 0.3 0.0064 15.5 0.2 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase F420_oxidored PF03807.12 gi|21226396|ref|NP_632318.1| - 0.0063 16.9 1.4 0.0082 16.5 0.2 1.9 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|21226396|ref|NP_632318.1| - 0.0064 15.6 0.1 0.013 14.6 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.13 gi|21226396|ref|NP_632318.1| - 0.01 15.5 0.1 0.018 14.7 0.1 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_3 PF01494.14 gi|21226396|ref|NP_632318.1| - 0.11 11.4 0.0 0.15 11.0 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain BPD_transp_1 PF00528.17 gi|21226397|ref|NP_632319.1| - 4.4e-22 78.4 17.9 6e-22 78.0 12.3 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.17 gi|21226398|ref|NP_632320.1| - 1.5e-23 83.2 12.7 2.2e-23 82.7 8.8 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|21226399|ref|NP_632321.1| - 2.8e-31 108.6 0.0 4.6e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226399|ref|NP_632321.1| - 8.5e-12 45.6 0.3 4.5e-07 30.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain CBS PF00571.23 gi|21226399|ref|NP_632321.1| - 1.4e-06 27.9 0.0 0.017 14.9 0.0 2.7 2 0 0 2 2 2 2 CBS domain AAA_16 PF13191.1 gi|21226399|ref|NP_632321.1| - 0.00041 20.4 0.1 0.00082 19.4 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|21226399|ref|NP_632321.1| - 0.00086 19.0 0.0 0.0019 17.8 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_29 PF13555.1 gi|21226399|ref|NP_632321.1| - 0.0019 17.7 0.0 0.0034 16.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21226399|ref|NP_632321.1| - 0.002 18.2 0.0 0.0086 16.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.1 gi|21226399|ref|NP_632321.1| - 0.0083 15.7 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21226399|ref|NP_632321.1| - 0.012 14.8 0.0 0.51 9.5 0.0 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|21226399|ref|NP_632321.1| - 0.012 14.7 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 UPF0079 PF02367.12 gi|21226399|ref|NP_632321.1| - 0.015 14.9 0.0 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 Mg_chelatase PF01078.16 gi|21226399|ref|NP_632321.1| - 0.019 14.1 0.0 0.033 13.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI cobW PF02492.14 gi|21226399|ref|NP_632321.1| - 0.02 14.3 0.0 0.042 13.2 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.13 gi|21226399|ref|NP_632321.1| - 0.03 13.7 0.0 0.054 12.9 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Zeta_toxin PF06414.7 gi|21226399|ref|NP_632321.1| - 0.068 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.1 gi|21226399|ref|NP_632321.1| - 0.074 12.9 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|21226399|ref|NP_632321.1| - 0.093 11.6 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.1 gi|21226399|ref|NP_632321.1| - 0.099 11.6 0.0 3.6 6.5 0.1 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_5 PF07728.9 gi|21226399|ref|NP_632321.1| - 0.1 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.10 gi|21226399|ref|NP_632321.1| - 0.1 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 NTPase G-alpha PF00503.15 gi|21226399|ref|NP_632321.1| - 0.12 11.0 0.0 0.17 10.5 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_17 PF13207.1 gi|21226399|ref|NP_632321.1| - 0.14 12.9 0.7 0.43 11.4 0.5 1.8 1 1 0 1 1 1 0 AAA domain OpuAC PF04069.7 gi|21226400|ref|NP_632322.1| - 2.3e-63 213.9 0.3 2.9e-63 213.6 0.2 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Lipase_bact_N PF12262.3 gi|21226400|ref|NP_632322.1| - 0.1 11.7 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal NTP_transferase PF00483.18 gi|21226401|ref|NP_632323.1| - 2.9e-39 134.8 0.0 3.8e-39 134.4 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|21226401|ref|NP_632323.1| - 1.6e-18 65.2 38.5 6.4e-09 34.9 1.0 5.1 2 1 4 6 6 6 6 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|21226401|ref|NP_632323.1| - 1.6e-13 51.0 0.0 2.2e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|21226401|ref|NP_632323.1| - 1.5e-07 30.8 21.5 9.6e-07 28.2 3.5 4.3 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|21226401|ref|NP_632323.1| - 2.6e-06 27.1 0.0 5.8e-06 25.9 0.0 1.6 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.21 gi|21226401|ref|NP_632323.1| - 0.013 15.1 0.1 0.031 13.9 0.1 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 SIS PF01380.17 gi|21226402|ref|NP_632324.1| - 6.3e-59 197.2 1.2 3.2e-30 104.3 0.1 2.7 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.1 gi|21226402|ref|NP_632324.1| - 8e-24 84.1 0.0 2.1e-23 82.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|21226402|ref|NP_632324.1| - 1.3e-19 70.1 0.0 1.6e-15 56.6 0.0 2.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|21226402|ref|NP_632324.1| - 1.9e-18 66.3 0.0 7.5e-18 64.4 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.1 gi|21226402|ref|NP_632324.1| - 1.3e-07 30.6 0.0 2.1e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF2795 PF11387.3 gi|21226402|ref|NP_632324.1| - 0.072 12.9 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) PGM_PMM_I PF02878.11 gi|21226403|ref|NP_632325.1| - 6.5e-38 129.3 0.0 1.2e-37 128.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|21226403|ref|NP_632325.1| - 3.5e-27 94.7 0.0 8.6e-27 93.4 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|21226403|ref|NP_632325.1| - 6.2e-19 68.1 0.0 1.1e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|21226403|ref|NP_632325.1| - 6.9e-11 41.9 0.1 1.6e-10 40.7 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_18 PF12847.2 gi|21226403|ref|NP_632325.1| - 0.045 14.3 0.0 0.15 12.6 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain NTP_transferase PF00483.18 gi|21226404|ref|NP_632326.1| - 1.1e-43 149.3 0.0 1.4e-43 149.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|21226404|ref|NP_632326.1| - 1.1e-17 62.6 19.7 1.5e-08 33.7 0.5 4.8 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|21226404|ref|NP_632326.1| - 2.2e-13 50.5 0.0 2.7e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|21226404|ref|NP_632326.1| - 7.1e-07 28.6 10.9 2.5e-05 23.7 1.0 4.7 3 1 2 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|21226404|ref|NP_632326.1| - 0.0001 21.8 0.0 0.00035 20.1 0.0 1.8 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AAA PF00004.24 gi|21226406|ref|NP_632328.1| - 8.1e-37 126.3 0.0 1.3e-36 125.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|21226406|ref|NP_632328.1| - 9.9e-10 38.5 0.0 3e-09 37.0 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_17 PF13207.1 gi|21226406|ref|NP_632328.1| - 8.2e-07 29.8 0.2 2.9e-06 28.0 0.1 2.1 2 1 0 2 2 1 1 AAA domain RuvB_N PF05496.7 gi|21226406|ref|NP_632328.1| - 1e-06 28.0 0.0 1.3e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|21226406|ref|NP_632328.1| - 4.4e-06 26.8 0.5 0.00046 20.3 0.3 2.6 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.8 gi|21226406|ref|NP_632328.1| - 1.7e-05 23.7 0.0 4.9e-05 22.2 0.0 1.7 2 0 0 2 2 2 1 TIP49 C-terminus AAA_5 PF07728.9 gi|21226406|ref|NP_632328.1| - 8e-05 22.3 0.0 0.00032 20.4 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.12 gi|21226406|ref|NP_632328.1| - 0.0001 21.7 0.0 0.0002 20.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.1 gi|21226406|ref|NP_632328.1| - 0.00015 21.7 0.0 0.00034 20.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21226406|ref|NP_632328.1| - 0.00031 20.7 0.1 0.0089 16.0 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.1 gi|21226406|ref|NP_632328.1| - 0.00034 20.9 0.0 0.0011 19.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|21226406|ref|NP_632328.1| - 0.0012 18.7 0.0 0.0021 17.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|21226406|ref|NP_632328.1| - 0.0014 17.8 0.0 0.0026 16.9 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI DUF815 PF05673.8 gi|21226406|ref|NP_632328.1| - 0.0031 16.4 0.0 0.0093 14.9 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.1 gi|21226406|ref|NP_632328.1| - 0.0039 16.5 1.4 0.11 11.8 0.1 2.1 1 1 1 2 2 2 1 AAA domain Bac_DnaA PF00308.13 gi|21226406|ref|NP_632328.1| - 0.018 14.7 0.0 0.044 13.4 0.0 1.6 1 1 0 1 1 1 0 Bacterial dnaA protein Sigma54_activat PF00158.21 gi|21226406|ref|NP_632328.1| - 0.024 14.1 0.0 0.062 12.7 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_10 PF12846.2 gi|21226406|ref|NP_632328.1| - 0.026 13.9 0.8 0.1 11.9 0.0 2.2 3 0 0 3 3 3 0 AAA-like domain RNA_helicase PF00910.17 gi|21226406|ref|NP_632328.1| - 0.027 14.6 0.0 0.064 13.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.12 gi|21226406|ref|NP_632328.1| - 0.029 13.2 0.0 0.052 12.4 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 IPT PF01745.11 gi|21226406|ref|NP_632328.1| - 0.035 13.2 0.0 0.065 12.3 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase PduV-EutP PF10662.4 gi|21226406|ref|NP_632328.1| - 0.038 13.4 0.0 0.08 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.1 gi|21226406|ref|NP_632328.1| - 0.04 13.5 0.0 0.066 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|21226406|ref|NP_632328.1| - 0.046 13.3 0.1 0.12 12.0 0.0 1.7 2 0 0 2 2 2 0 NACHT domain PhoH PF02562.11 gi|21226406|ref|NP_632328.1| - 0.049 12.8 0.0 0.12 11.6 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein ABC_tran PF00005.22 gi|21226406|ref|NP_632328.1| - 0.063 13.5 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter AAA_14 PF13173.1 gi|21226406|ref|NP_632328.1| - 0.07 13.0 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Torsin PF06309.6 gi|21226406|ref|NP_632328.1| - 0.073 12.9 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Torsin T2SE PF00437.15 gi|21226406|ref|NP_632328.1| - 0.083 11.7 0.0 0.15 10.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein HARE-HTH PF05066.8 gi|21226406|ref|NP_632328.1| - 0.088 13.1 0.0 0.22 11.9 0.0 1.6 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain PEPCK_ATP PF01293.15 gi|21226406|ref|NP_632328.1| - 0.094 11.2 0.0 0.15 10.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase Sigma54_activ_2 PF14532.1 gi|21226406|ref|NP_632328.1| - 0.12 12.3 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF258 PF03193.11 gi|21226406|ref|NP_632328.1| - 0.15 11.2 0.0 0.27 10.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Lactamase_B_2 PF12706.2 gi|21226408|ref|NP_632330.1| - 3.2e-33 114.9 0.0 4e-33 114.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21226408|ref|NP_632330.1| - 8.4e-14 51.6 0.0 2.4e-11 43.6 0.0 2.2 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.1 gi|21226408|ref|NP_632330.1| - 0.0013 18.1 0.0 0.0027 17.1 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease TP_methylase PF00590.15 gi|21226409|ref|NP_632331.1| - 4.6e-54 183.3 0.1 5.3e-54 183.1 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HEM4 PF02602.10 gi|21226410|ref|NP_632332.1| - 1.4e-49 168.3 0.0 1.7e-49 168.1 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Radical_SAM PF04055.16 gi|21226411|ref|NP_632333.1| - 7.9e-23 81.4 0.0 5.1e-22 78.8 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21226411|ref|NP_632333.1| - 1.3e-10 41.5 0.0 2.6e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21226411|ref|NP_632333.1| - 1.8e-09 37.6 0.0 3.3e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Glyco_hydro_97 PF10566.4 gi|21226411|ref|NP_632333.1| - 0.035 13.2 0.0 0.053 12.6 0.0 1.3 1 0 0 1 1 1 0 Glycoside hydrolase 97 Pterin_bind PF00809.17 gi|21226411|ref|NP_632333.1| - 0.036 13.4 0.0 3 7.1 0.0 2.3 2 0 0 2 2 2 0 Pterin binding enzyme AP_endonuc_2 PF01261.19 gi|21226411|ref|NP_632333.1| - 0.11 11.7 0.0 0.24 10.6 0.0 1.5 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel APH PF01636.18 gi|21226412|ref|NP_632334.1| - 1.4e-28 100.2 0.0 1.7e-28 99.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.9 gi|21226412|ref|NP_632334.1| - 7.9e-05 21.7 0.0 0.00011 21.3 0.0 1.1 1 0 0 1 1 1 1 Fructosamine kinase Choline_kinase PF01633.15 gi|21226412|ref|NP_632334.1| - 0.0014 18.2 0.1 0.0078 15.8 0.0 1.9 2 0 0 2 2 2 1 Choline/ethanolamine kinase APH PF01636.18 gi|21226413|ref|NP_632335.1| - 1.4e-06 28.2 0.0 2e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.17 gi|21226413|ref|NP_632335.1| - 0.012 14.9 0.0 3.7 6.8 0.0 2.3 2 0 0 2 2 2 0 RIO1 family Pkinase_Tyr PF07714.12 gi|21226413|ref|NP_632335.1| - 0.13 11.2 0.0 0.29 10.1 0.0 1.6 1 1 0 1 1 1 0 Protein tyrosine kinase HAD_2 PF13419.1 gi|21226414|ref|NP_632336.1| - 1.2e-23 84.1 0.0 1.5e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21226414|ref|NP_632336.1| - 0.0026 17.4 0.0 0.0043 16.7 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|21226414|ref|NP_632336.1| - 0.053 13.9 0.0 0.13 12.6 0.0 1.6 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|21226415|ref|NP_632337.1| - 1.4e-23 83.9 0.0 1.7e-23 83.7 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21226415|ref|NP_632337.1| - 2.1e-06 27.3 0.0 3.5e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|21226415|ref|NP_632337.1| - 3.9e-05 24.1 0.0 5.9e-05 23.5 0.0 1.6 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|21226415|ref|NP_632337.1| - 0.13 11.3 0.0 0.49 9.5 0.0 1.8 2 0 0 2 2 2 0 Putative Phosphatase tRNA-synt_1 PF00133.17 gi|21226416|ref|NP_632338.1| - 1.3e-135 452.7 1.1 7.9e-135 450.1 0.8 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|21226416|ref|NP_632338.1| - 2.9e-35 121.2 0.0 6.1e-35 120.2 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|21226416|ref|NP_632338.1| - 5.4e-24 84.5 0.1 9.7e-14 50.8 0.0 3.4 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|21226416|ref|NP_632338.1| - 3e-06 26.6 0.0 3.6e-05 23.1 0.0 2.4 2 1 1 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|21226416|ref|NP_632338.1| - 1.3e-05 24.4 0.0 0.037 13.1 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|21226416|ref|NP_632338.1| - 0.036 12.7 0.0 0.97 8.0 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) MatK_N PF01824.13 gi|21226417|ref|NP_632339.1| - 0.0078 15.3 2.0 0.012 14.7 1.4 1.2 1 0 0 1 1 1 1 MatK/TrnK amino terminal region DHBP_synthase PF00926.14 gi|21226417|ref|NP_632339.1| - 0.04 13.1 0.2 0.08 12.1 0.1 1.4 1 0 0 1 1 1 0 3,4-dihydroxy-2-butanone 4-phosphate synthase T2SF PF00482.18 gi|21226418|ref|NP_632340.1| - 5.5e-16 58.5 0.0 5.1e-09 36.0 0.0 3.9 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F DUF2839 PF10999.3 gi|21226418|ref|NP_632340.1| - 0.052 13.5 1.7 7.8 6.6 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2839) FANCF PF11107.3 gi|21226418|ref|NP_632340.1| - 0.071 12.3 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 Fanconi anemia group F protein (FANCF) Peptidase_C97 PF05903.9 gi|21226418|ref|NP_632340.1| - 0.12 12.1 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 PPPDE putative peptidase domain T2SE PF00437.15 gi|21226419|ref|NP_632341.1| - 2.7e-44 151.1 0.0 3.8e-44 150.6 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.22 gi|21226419|ref|NP_632341.1| - 0.015 15.5 0.1 0.064 13.5 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_29 PF13555.1 gi|21226419|ref|NP_632341.1| - 0.099 12.1 0.1 0.24 10.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain KaiC PF06745.8 gi|21226420|ref|NP_632342.1| - 1.7e-26 92.7 0.2 1.9e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.6 gi|21226420|ref|NP_632342.1| - 2.3e-09 36.5 1.6 2.2e-05 23.4 0.1 2.1 1 1 0 2 2 2 2 PAXNEB protein AAA_25 PF13481.1 gi|21226420|ref|NP_632342.1| - 2e-07 30.6 0.0 3.5e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF835 PF05763.7 gi|21226420|ref|NP_632342.1| - 2.8e-06 26.9 0.1 5.9e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF835) AAA_22 PF13401.1 gi|21226420|ref|NP_632342.1| - 0.00053 20.1 0.0 0.001 19.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.6 gi|21226420|ref|NP_632342.1| - 0.00092 18.1 0.2 0.0036 16.2 0.1 2.0 1 1 0 1 1 1 1 Rad51 AAA_14 PF13173.1 gi|21226420|ref|NP_632342.1| - 0.011 15.5 0.5 0.19 11.6 0.3 2.3 1 1 0 1 1 1 0 AAA domain Elong_Iki1 PF10483.4 gi|21226420|ref|NP_632342.1| - 0.025 13.9 0.1 0.03 13.6 0.1 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 RecA PF00154.16 gi|21226420|ref|NP_632342.1| - 0.042 12.9 0.1 0.12 11.3 0.0 1.6 2 0 0 2 2 2 0 recA bacterial DNA recombination protein UPF0079 PF02367.12 gi|21226420|ref|NP_632342.1| - 0.052 13.1 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_15 PF13175.1 gi|21226420|ref|NP_632342.1| - 0.06 12.3 7.0 0.34 9.9 0.4 2.2 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.13 gi|21226420|ref|NP_632342.1| - 0.073 12.5 0.0 1 8.8 0.0 2.0 1 1 1 2 2 2 0 FtsK/SpoIIIE family DUF4097 PF13349.1 gi|21226421|ref|NP_632343.1| - 0.0091 15.5 0.4 0.013 15.0 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4097) Arch_flagellin PF01917.11 gi|21226422|ref|NP_632344.1| - 3.7e-06 26.6 0.0 8.2e-06 25.5 0.0 1.7 1 1 0 1 1 1 1 Archaebacterial flagellin Ribosomal_60s PF00428.14 gi|21226423|ref|NP_632345.1| - 0.011 16.1 1.1 0.026 14.9 0.7 1.6 1 0 0 1 1 1 0 60s Acidic ribosomal protein UCH PF00443.24 gi|21226423|ref|NP_632345.1| - 0.12 11.4 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Arch_flagellin PF01917.11 gi|21226424|ref|NP_632346.1| - 2.7e-29 102.1 6.2 7e-29 100.7 4.3 1.6 1 1 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.11 gi|21226425|ref|NP_632347.1| - 2.9e-29 102.0 7.7 5.7e-29 101.1 5.3 1.4 1 1 0 1 1 1 1 Archaebacterial flagellin CheR PF01739.13 gi|21226427|ref|NP_632349.1| - 1.4e-59 200.7 0.0 1.7e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.10 gi|21226427|ref|NP_632349.1| - 5.6e-15 54.4 0.8 9.2e-15 53.7 0.5 1.3 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_25 PF13649.1 gi|21226427|ref|NP_632349.1| - 0.00011 22.4 0.0 0.00021 21.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21226427|ref|NP_632349.1| - 0.00016 22.0 0.0 0.00063 20.1 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226427|ref|NP_632349.1| - 0.00032 20.4 0.0 0.00039 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226427|ref|NP_632349.1| - 0.00062 20.2 0.0 0.0015 19.0 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226427|ref|NP_632349.1| - 0.0031 18.0 0.0 0.0056 17.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226427|ref|NP_632349.1| - 0.012 15.2 0.1 0.06 12.9 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_2 PF00891.13 gi|21226427|ref|NP_632349.1| - 0.021 13.9 0.0 0.03 13.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase CheD PF03975.8 gi|21226428|ref|NP_632350.1| - 3.1e-31 107.5 0.2 4.5e-31 106.9 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.7 gi|21226429|ref|NP_632351.1| - 1e-25 89.1 0.3 1.4e-13 50.2 0.0 2.5 2 0 0 2 2 2 2 CheC-like family CheX PF13690.1 gi|21226429|ref|NP_632351.1| - 1.1e-12 47.6 0.3 2.5e-07 30.4 0.0 2.2 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX CheW PF01584.14 gi|21226430|ref|NP_632352.1| - 3.7e-28 97.6 0.8 6e-27 93.7 0.3 2.6 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.21 gi|21226430|ref|NP_632352.1| - 1.2e-21 76.4 0.1 3.4e-21 75.0 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P2 PF07194.6 gi|21226430|ref|NP_632352.1| - 1.3e-19 69.8 0.4 1.3e-19 69.8 0.3 2.7 3 0 0 3 3 3 1 P2 response regulator binding domain Hpt PF01627.18 gi|21226430|ref|NP_632352.1| - 1.5e-17 63.3 0.0 4.6e-17 61.8 0.0 1.9 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.9 gi|21226430|ref|NP_632352.1| - 3.5e-17 62.4 3.5 7.5e-17 61.4 0.8 2.7 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.1 gi|21226430|ref|NP_632352.1| - 2.7e-06 27.0 0.1 1e-05 25.1 0.1 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|21226430|ref|NP_632352.1| - 0.00051 19.7 0.6 0.0047 16.6 0.4 2.6 1 1 0 1 1 1 1 GHKL domain CheB_methylest PF01339.12 gi|161485682|ref|NP_632353.2| - 8.7e-60 201.2 0.2 1.3e-59 200.7 0.1 1.2 1 0 0 1 1 1 1 CheB methylesterase Response_reg PF00072.19 gi|161485682|ref|NP_632353.2| - 1e-23 83.4 0.6 2.2e-23 82.3 0.4 1.6 1 0 0 1 1 1 1 Response regulator receiver domain MTD PF01993.13 gi|161485682|ref|NP_632353.2| - 0.028 13.4 1.1 0.96 8.4 0.2 2.2 1 1 1 2 2 2 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase DUF1542 PF07564.6 gi|161485682|ref|NP_632353.2| - 0.035 14.1 0.0 0.38 10.7 0.0 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) Response_reg PF00072.19 gi|21226432|ref|NP_632354.1| - 4.1e-30 104.0 0.9 4.6e-30 103.9 0.6 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CheF-arch PF04283.7 gi|21226433|ref|NP_632355.1| - 1e-49 168.7 1.0 1.4e-49 168.3 0.7 1.1 1 0 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea HTH_45 PF14947.1 gi|21226433|ref|NP_632355.1| - 0.00037 20.2 0.1 0.0089 15.8 0.0 2.8 2 2 1 3 3 3 1 Winged helix-turn-helix CheW PF01584.14 gi|21226434|ref|NP_632356.1| - 6.9e-37 125.9 0.2 7.9e-37 125.7 0.2 1.0 1 0 0 1 1 1 1 CheW-like domain MCPsignal PF00015.16 gi|21226435|ref|NP_632357.1| - 2.8e-48 164.2 46.2 3e-47 160.9 19.4 4.0 3 1 2 5 5 5 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|21226435|ref|NP_632357.1| - 1.5e-20 73.5 0.1 1.4e-09 38.2 0.0 3.1 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|21226435|ref|NP_632357.1| - 1.2e-17 63.7 0.0 1.2e-16 60.5 0.0 2.5 2 0 0 2 2 2 1 PAS fold PAS PF00989.19 gi|21226435|ref|NP_632357.1| - 9.4e-12 44.7 0.0 3.8e-06 26.6 0.0 3.2 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|21226435|ref|NP_632357.1| - 9.7e-12 44.9 0.0 0.00011 22.1 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|21226435|ref|NP_632357.1| - 0.00069 19.5 0.0 0.0091 15.9 0.0 2.6 2 1 1 3 3 3 1 PAS domain HAMP PF00672.20 gi|21226435|ref|NP_632357.1| - 0.00093 19.3 1.0 0.15 12.2 0.0 4.2 3 1 0 3 3 3 1 HAMP domain CK2S PF15011.1 gi|21226435|ref|NP_632357.1| - 0.016 14.9 10.8 0.15 11.8 0.2 3.6 4 1 0 4 4 3 0 Casein Kinase 2 substrate HisKA_2 PF07568.7 gi|21226435|ref|NP_632357.1| - 0.061 13.1 1.2 7.1 6.5 0.1 3.7 3 2 0 3 3 3 0 Histidine kinase PAS_8 PF13188.1 gi|21226435|ref|NP_632357.1| - 0.1 12.5 0.0 1.7 8.6 0.0 2.6 2 0 0 2 2 2 0 PAS domain DUF489 PF04356.7 gi|21226435|ref|NP_632357.1| - 0.18 11.3 11.0 0.17 11.4 4.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF489) Vps53_N PF04100.7 gi|21226435|ref|NP_632357.1| - 3.8 6.1 27.4 3.4 6.3 1.9 4.3 3 2 1 4 4 4 0 Vps53-like, N-terminal Ufd2P_core PF10408.4 gi|21226435|ref|NP_632357.1| - 4.9 5.2 12.0 0.19 9.9 2.3 2.3 2 1 0 2 2 2 0 Ubiquitin elongating factor core FUSC PF04632.7 gi|21226435|ref|NP_632357.1| - 5.6 5.2 11.6 2 6.7 2.4 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family LOH1CR12 PF10158.4 gi|21226435|ref|NP_632357.1| - 5.7 6.7 14.4 4.4 7.1 0.9 3.8 3 2 1 4 4 4 0 Tumour suppressor protein AATF-Che1 PF13339.1 gi|21226435|ref|NP_632357.1| - 6.6 6.8 16.7 2.5 8.2 4.0 3.5 3 1 0 3 3 3 0 Apoptosis antagonizing transcription factor Laminin_II PF06009.7 gi|21226435|ref|NP_632357.1| - 8.8 6.0 38.5 0.55 9.9 4.0 5.8 3 2 1 5 5 5 0 Laminin Domain II DrsE PF02635.10 gi|21226436|ref|NP_632358.1| - 8.5e-11 41.9 0.0 9.8e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.1 gi|21226436|ref|NP_632358.1| - 2.3e-09 37.1 0.1 2.4e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family HMG-CoA_red PF00368.13 gi|21226437|ref|NP_632359.1| - 1.7e-149 497.5 2.1 1.9e-149 497.3 1.4 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase DUF1330 PF07045.6 gi|21226437|ref|NP_632359.1| - 0.045 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1330) DUF1699 PF08004.6 gi|21226438|ref|NP_632360.1| - 1.9e-67 224.7 2.6 2.1e-67 224.5 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21226438|ref|NP_632360.1| - 0.066 13.4 0.2 0.14 12.4 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PALP PF00291.20 gi|161485681|ref|NP_632361.2| - 8.3e-38 130.3 0.0 1e-37 130.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Phos_pyr_kin PF08543.7 gi|21226440|ref|NP_632362.1| - 5.5e-83 277.9 5.2 8.4e-83 277.3 3.6 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Aldolase_2 PF10120.4 gi|21226440|ref|NP_632362.1| - 1.8e-64 216.2 0.2 2.7e-64 215.6 0.1 1.3 1 0 0 1 1 1 1 Putative aldolase PfkB PF00294.19 gi|21226440|ref|NP_632362.1| - 7.3e-10 38.4 1.7 1.1e-09 37.8 1.2 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.10 gi|21226440|ref|NP_632362.1| - 7.7e-05 21.9 1.4 0.00017 20.8 1.0 1.5 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family LSM PF01423.17 gi|21226441|ref|NP_632363.1| - 1.3e-20 72.6 0.1 1.5e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 LSM domain Ribosomal_L37e PF01907.14 gi|21226442|ref|NP_632364.1| - 8.4e-22 76.7 15.6 9e-22 76.6 10.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e zinc_ribbon_2 PF13240.1 gi|21226442|ref|NP_632364.1| - 0.0089 15.4 2.8 0.017 14.5 1.9 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|21226442|ref|NP_632364.1| - 0.012 15.4 1.6 0.017 14.9 1.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS91 PF14319.1 gi|21226442|ref|NP_632364.1| - 0.018 14.5 4.4 0.017 14.6 3.1 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-ribbon_3 PF13248.1 gi|21226442|ref|NP_632364.1| - 0.034 13.3 2.6 0.077 12.2 1.8 1.7 1 1 0 1 1 1 0 zinc-ribbon domain HypA PF01155.14 gi|21226442|ref|NP_632364.1| - 0.22 11.2 2.4 0.24 11.1 1.7 1.2 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Zn-ribbon_8 PF09723.5 gi|21226442|ref|NP_632364.1| - 1.1 9.2 6.0 3.7 7.5 0.2 2.2 1 1 2 3 3 3 0 Zinc ribbon domain YhfH PF14149.1 gi|21226442|ref|NP_632364.1| - 1.3 8.8 6.2 1.5 8.6 0.5 2.3 1 1 1 2 2 2 0 YhfH-like protein OrfB_Zn_ribbon PF07282.6 gi|21226442|ref|NP_632364.1| - 4.6 6.9 7.1 4.1 7.1 4.1 1.6 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|21226442|ref|NP_632364.1| - 6.2 6.3 7.0 15 5.1 0.7 2.3 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit GATase_2 PF00310.16 gi|21226443|ref|NP_632365.1| - 2.1e-22 79.3 0.0 1.4e-15 56.9 0.0 3.0 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_7 PF13537.1 gi|21226443|ref|NP_632365.1| - 3.1e-21 75.3 0.0 5.2e-21 74.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|21226443|ref|NP_632365.1| - 1.9e-20 73.1 0.0 5.3e-20 71.7 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain Pribosyltran PF00156.22 gi|21226443|ref|NP_632365.1| - 6.6e-13 48.4 0.7 1.4e-12 47.3 0.5 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|21226443|ref|NP_632365.1| - 8.6e-09 34.4 0.0 1.5e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II UPF0047 PF01894.12 gi|21226444|ref|NP_632366.1| - 6.9e-42 141.9 0.0 7.9e-42 141.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2113 PF09886.4 gi|21226444|ref|NP_632366.1| - 0.098 11.7 0.0 0.18 10.9 0.0 1.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2113) MatE PF01554.13 gi|21226446|ref|NP_632368.1| - 8.3e-57 191.3 38.5 1.2e-30 106.2 9.6 3.1 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.1 gi|21226446|ref|NP_632368.1| - 5.3e-12 45.7 29.1 1.5e-11 44.3 9.9 4.7 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TrmB PF01978.14 gi|21226447|ref|NP_632369.1| - 1.7e-24 85.2 0.2 4.3e-24 83.9 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.11 gi|21226447|ref|NP_632369.1| - 0.00012 22.1 0.0 0.00015 21.8 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.1 gi|21226447|ref|NP_632369.1| - 0.0002 20.6 0.0 0.00036 19.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.15 gi|21226447|ref|NP_632369.1| - 0.0013 18.7 0.0 0.002 18.2 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.2 gi|21226447|ref|NP_632369.1| - 0.0019 17.8 0.0 0.0035 16.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_9 PF08221.6 gi|21226447|ref|NP_632369.1| - 0.0084 15.9 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain PadR PF03551.9 gi|21226447|ref|NP_632369.1| - 0.0086 15.8 0.3 0.054 13.2 0.0 2.2 2 1 1 3 3 3 1 Transcriptional regulator PadR-like family YflT PF11181.3 gi|21226447|ref|NP_632369.1| - 0.02 15.0 0.1 0.06 13.4 0.0 1.8 2 0 0 2 2 2 0 Heat induced stress protein YflT HTH_IclR PF09339.5 gi|21226447|ref|NP_632369.1| - 0.051 13.1 0.0 0.15 11.6 0.0 1.7 2 0 0 2 2 2 0 IclR helix-turn-helix domain Sulfolobus_pRN PF05584.6 gi|21226447|ref|NP_632369.1| - 0.077 12.9 0.2 0.29 11.1 0.0 1.9 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein TFIIE_alpha PF02002.12 gi|21226447|ref|NP_632369.1| - 0.09 12.2 0.0 0.22 11.0 0.0 1.5 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_34 PF13601.1 gi|21226447|ref|NP_632369.1| - 0.091 12.8 0.0 0.33 11.0 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain MotA_activ PF09114.5 gi|21226447|ref|NP_632369.1| - 0.092 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcription factor MotA, activation domain MarR PF01047.17 gi|21226448|ref|NP_632370.1| - 1.8e-10 40.3 0.0 3.5e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21226448|ref|NP_632370.1| - 1.4e-07 31.7 0.1 5.2e-07 29.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21226448|ref|NP_632370.1| - 4.2e-05 23.1 0.0 6.5e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|21226448|ref|NP_632370.1| - 0.00022 21.1 0.0 0.0005 20.0 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain RPAP1_N PF08621.5 gi|21226448|ref|NP_632370.1| - 0.0024 17.4 1.0 0.0063 16.0 0.7 1.7 1 0 0 1 1 1 1 RPAP1-like, N-terminal HTH_45 PF14947.1 gi|21226448|ref|NP_632370.1| - 0.009 15.8 0.0 0.022 14.5 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix HxlR PF01638.12 gi|21226448|ref|NP_632370.1| - 0.022 14.4 0.1 0.044 13.4 0.0 1.6 2 0 0 2 2 2 0 HxlR-like helix-turn-helix PadR PF03551.9 gi|21226448|ref|NP_632370.1| - 0.05 13.3 0.2 0.14 11.9 0.0 1.8 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family RepL PF05732.6 gi|21226448|ref|NP_632370.1| - 0.09 11.9 0.1 0.39 9.9 0.1 1.9 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) CDC48_2 PF02933.12 gi|21226449|ref|NP_632371.1| - 0.068 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 MatE PF01554.13 gi|21226450|ref|NP_632372.1| - 3.1e-47 160.2 33.3 3.2e-26 91.8 6.7 3.0 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.1 gi|21226450|ref|NP_632372.1| - 8.8e-12 45.0 23.5 1.3e-10 41.2 6.2 4.8 2 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TraS PF10624.4 gi|21226450|ref|NP_632372.1| - 0.055 13.0 2.1 0.15 11.5 1.5 1.8 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Rhodanese PF00581.15 gi|21226452|ref|NP_632374.1| - 1.8e-40 137.7 0.0 2e-19 69.9 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain DUF442 PF04273.8 gi|21226452|ref|NP_632374.1| - 9.2e-06 25.4 0.0 0.18 11.6 0.0 2.4 2 0 0 2 2 2 2 Putative phosphatase (DUF442) DSPc PF00782.15 gi|21226452|ref|NP_632374.1| - 0.11 12.0 0.0 8.5 5.9 0.0 2.2 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain Y1_Tnp PF01797.11 gi|21226457|ref|NP_632379.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like Abhydrolase_6 PF12697.2 gi|21226458|ref|NP_632380.1| - 9.9e-07 28.8 0.0 1.6e-06 28.2 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|21226458|ref|NP_632380.1| - 0.00038 20.2 0.0 0.00058 19.6 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF915 PF06028.6 gi|21226458|ref|NP_632380.1| - 0.054 12.5 0.0 0.089 11.8 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) ELFV_dehydrog PF00208.16 gi|21226459|ref|NP_632381.1| - 1.2e-59 201.9 0.0 1.4e-59 201.6 0.0 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.13 gi|21226459|ref|NP_632381.1| - 1.2e-30 105.8 0.0 1.7e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.14 gi|21226459|ref|NP_632381.1| - 0.012 14.7 0.1 0.024 13.7 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Gp_dh_N PF00044.19 gi|21226459|ref|NP_632381.1| - 0.016 15.1 0.6 0.37 10.7 0.1 2.5 2 1 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Bac_GDH PF05088.7 gi|21226459|ref|NP_632381.1| - 0.02 12.3 0.0 0.027 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase AdoHcyase_NAD PF00670.16 gi|21226459|ref|NP_632381.1| - 0.045 13.6 0.1 0.086 12.6 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_7 PF13241.1 gi|21226459|ref|NP_632381.1| - 0.062 13.5 0.0 0.15 12.3 0.0 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding ThiF PF00899.16 gi|21226459|ref|NP_632381.1| - 0.13 12.1 1.0 0.25 11.1 0.7 1.5 1 0 0 1 1 1 0 ThiF family Succ_CoA_lig PF13607.1 gi|21226460|ref|NP_632382.1| - 2.2e-49 166.5 0.7 2e-48 163.4 0.5 2.3 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|21226460|ref|NP_632382.1| - 2.3e-24 85.8 0.0 2.5e-22 79.2 0.0 3.1 3 1 0 3 3 3 1 CoA binding domain CoA_binding PF02629.14 gi|21226460|ref|NP_632382.1| - 2.5e-13 50.3 0.0 3.5e-11 43.4 0.0 3.4 4 0 0 4 4 4 1 CoA binding domain HEM4 PF02602.10 gi|21226460|ref|NP_632382.1| - 0.006 15.8 0.2 0.16 11.2 0.0 2.8 2 1 1 3 3 3 1 Uroporphyrinogen-III synthase HemD Peripla_BP_3 PF13377.1 gi|21226460|ref|NP_632382.1| - 0.0077 16.2 0.0 0.2 11.6 0.0 2.5 2 0 0 2 2 2 1 Periplasmic binding protein-like domain SAP PF02037.22 gi|21226460|ref|NP_632382.1| - 0.07 12.6 0.3 3 7.4 0.0 3.0 3 0 0 3 3 3 0 SAP domain DEDD_Tnp_IS110 PF01548.12 gi|21226460|ref|NP_632382.1| - 0.11 12.1 0.0 14 5.3 0.0 2.4 2 0 0 2 2 2 0 Transposase HxlR PF01638.12 gi|21226461|ref|NP_632383.1| - 3.6e-20 71.3 0.3 4.3e-20 71.1 0.2 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix YjcQ PF09639.5 gi|21226461|ref|NP_632383.1| - 0.0007 19.6 0.0 0.0014 18.6 0.0 1.5 1 1 0 1 1 1 1 YjcQ protein PadR PF03551.9 gi|21226461|ref|NP_632383.1| - 0.0057 16.3 0.0 0.0085 15.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|21226461|ref|NP_632383.1| - 0.0061 16.6 0.0 0.008 16.2 0.0 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.1 gi|21226461|ref|NP_632383.1| - 0.074 12.8 0.1 0.15 11.8 0.1 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix DUF4393 PF14337.1 gi|21226461|ref|NP_632383.1| - 0.1 12.0 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) DUF3936 PF13072.1 gi|21226461|ref|NP_632383.1| - 0.12 11.8 1.3 0.4 10.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3936) HTH_27 PF13463.1 gi|21226461|ref|NP_632383.1| - 0.12 12.6 0.1 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain NIR_SIR PF01077.17 gi|21226462|ref|NP_632384.1| - 2e-36 124.6 0.0 1.9e-35 121.5 0.0 1.9 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|21226462|ref|NP_632384.1| - 8e-17 60.6 0.0 1.7e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain HxlR PF01638.12 gi|21226463|ref|NP_632385.1| - 4.5e-24 83.8 0.5 5.5e-24 83.6 0.3 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.1 gi|21226463|ref|NP_632385.1| - 4.3e-05 23.4 0.1 5.7e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.9 gi|21226463|ref|NP_632385.1| - 0.00012 21.7 0.0 0.00026 20.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|21226463|ref|NP_632385.1| - 0.00018 21.5 0.1 0.00025 21.0 0.1 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.1 gi|21226463|ref|NP_632385.1| - 0.0024 17.6 0.1 0.0038 16.9 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DUF4423 PF14394.1 gi|21226463|ref|NP_632385.1| - 0.029 13.9 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_24 PF13412.1 gi|21226463|ref|NP_632385.1| - 0.029 13.7 0.4 0.049 13.0 0.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF438 PF04282.8 gi|21226463|ref|NP_632385.1| - 0.071 12.9 0.5 0.13 12.0 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF438) HTH_27 PF13463.1 gi|21226463|ref|NP_632385.1| - 0.1 12.9 0.1 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|21226463|ref|NP_632385.1| - 0.11 12.6 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator NIR_SIR PF01077.17 gi|21226464|ref|NP_632386.1| - 9.6e-38 129.0 0.0 1.6e-37 128.2 0.0 1.4 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|21226464|ref|NP_632386.1| - 1.4e-13 50.2 0.0 2.7e-13 49.3 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain TPR_21 PF09976.4 gi|21226464|ref|NP_632386.1| - 0.1 12.5 0.6 2.5 8.0 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Cupin_2 PF07883.6 gi|21226465|ref|NP_632387.1| - 2.4e-14 52.5 0.1 3.2e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 gi|21226465|ref|NP_632387.1| - 0.00084 18.7 0.0 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.14 gi|21226465|ref|NP_632387.1| - 0.014 15.0 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|21226465|ref|NP_632387.1| - 0.025 14.1 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase DUF4585 PF15232.1 gi|21226465|ref|NP_632387.1| - 0.055 13.3 0.0 0.27 11.1 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4585) cNMP_binding PF00027.24 gi|21226465|ref|NP_632387.1| - 0.077 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Pirin_C PF05726.8 gi|21226465|ref|NP_632387.1| - 0.078 13.0 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain CGGC PF08821.6 gi|21226466|ref|NP_632388.1| - 7.9e-37 125.5 1.2 9e-37 125.4 0.8 1.0 1 0 0 1 1 1 1 CGGC domain B12-binding PF02310.14 gi|21226466|ref|NP_632388.1| - 0.11 12.3 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain zf-C2H2 PF00096.21 gi|21226466|ref|NP_632388.1| - 0.15 12.4 3.0 3.4 8.1 0.1 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type Fer4_7 PF12838.2 gi|21226468|ref|NP_632390.1| - 8.9e-10 38.7 33.4 2.7e-06 27.6 6.5 2.7 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226468|ref|NP_632390.1| - 1.4e-08 34.4 7.5 1.4e-08 34.4 5.2 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226468|ref|NP_632390.1| - 2.3e-08 33.5 8.7 3.7e-07 29.7 2.6 4.1 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4 PF00037.22 gi|21226468|ref|NP_632390.1| - 9e-08 31.4 11.9 7.9e-06 25.2 3.5 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21226468|ref|NP_632390.1| - 9.3e-08 32.2 19.5 2.3e-06 27.7 5.4 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226468|ref|NP_632390.1| - 4.4e-07 30.5 12.6 0.00031 21.4 1.9 2.4 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|21226468|ref|NP_632390.1| - 6e-07 29.1 8.5 6e-07 29.1 5.9 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21226468|ref|NP_632390.1| - 0.00011 22.6 12.6 0.0088 16.5 2.3 2.7 1 1 2 3 3 3 2 4Fe-4S single cluster domain Fer4_2 PF12797.2 gi|21226468|ref|NP_632390.1| - 0.00036 20.2 3.8 0.00036 20.2 2.6 3.9 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21226468|ref|NP_632390.1| - 0.0033 17.7 11.3 0.15 12.4 0.5 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21226468|ref|NP_632390.1| - 0.016 15.4 17.5 0.029 14.6 2.5 4.0 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226468|ref|NP_632390.1| - 0.024 14.6 15.9 0.86 9.6 2.8 3.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|21226468|ref|NP_632390.1| - 0.26 11.1 6.8 12 5.8 4.7 3.4 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_11 PF13247.1 gi|21226468|ref|NP_632390.1| - 0.61 10.0 8.2 0.45 10.4 3.5 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226468|ref|NP_632390.1| - 5.2 7.5 18.5 0.13 12.6 1.3 3.5 2 1 0 2 2 1 0 4Fe-4S dicluster domain zf-RanBP PF00641.13 gi|21226468|ref|NP_632390.1| - 9.1 5.4 11.2 3.5 6.8 0.0 3.2 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Hemerythrin PF01814.18 gi|21226469|ref|NP_632391.1| - 3.9e-22 78.8 0.7 3.9e-22 78.8 0.5 2.0 2 0 0 2 2 2 1 Hemerythrin HHE cation binding domain YgbA_NO PF11756.3 gi|21226469|ref|NP_632391.1| - 0.11 12.5 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter Phage_Integr_2 PF13009.1 gi|21226469|ref|NP_632391.1| - 0.12 11.2 0.0 1.3 7.9 0.0 1.9 2 0 0 2 2 2 0 Putative phage integrase CMD PF02627.15 gi|21226470|ref|NP_632392.1| - 1.5e-18 66.3 0.1 1.8e-18 66.1 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.10 gi|21226470|ref|NP_632392.1| - 0.071 12.9 2.2 0.096 12.5 0.8 1.9 2 1 0 2 2 2 0 Saposin-like type B, region 1 TrmB PF01978.14 gi|21226471|ref|NP_632393.1| - 1.6e-23 82.2 0.2 3.4e-23 81.1 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|21226471|ref|NP_632393.1| - 4.7e-05 22.4 0.0 6.7e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB VirK PF06903.7 gi|21226471|ref|NP_632393.1| - 0.095 12.4 0.0 9.1 6.0 0.0 2.2 2 0 0 2 2 2 0 VirK protein PLDc_2 PF13091.1 gi|21226471|ref|NP_632393.1| - 0.11 12.2 0.0 6.1 6.6 0.0 2.4 2 0 0 2 2 2 0 PLD-like domain PDT PF00800.13 gi|21226472|ref|NP_632394.1| - 3.4e-56 189.6 0.0 4.6e-56 189.2 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|21226472|ref|NP_632394.1| - 9.4e-10 37.7 0.0 3e-09 36.1 0.0 1.9 2 0 0 2 2 2 1 ACT domain SSURE PF11966.3 gi|21226472|ref|NP_632394.1| - 0.12 11.9 0.0 0.29 10.7 0.0 1.6 1 0 0 1 1 1 0 Fibronectin-binding repeat LMBR1 PF04791.11 gi|21226473|ref|NP_632395.1| - 0.0049 15.5 0.3 0.0062 15.1 0.2 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein ABC2_membrane_2 PF12679.2 gi|21226473|ref|NP_632395.1| - 0.055 12.3 1.1 0.097 11.5 0.8 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein TPR_3 PF07720.7 gi|21226473|ref|NP_632395.1| - 0.13 12.0 0.1 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat N_methyl_2 PF13544.1 gi|21226473|ref|NP_632395.1| - 8.2 6.1 6.5 21 4.7 4.5 1.8 1 0 0 1 1 1 0 Type IV pilin N-term methylation site GFxxxE AAA_3 PF07726.6 gi|21226474|ref|NP_632396.1| - 3.3e-63 211.1 0.1 5.4e-63 210.4 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|21226474|ref|NP_632396.1| - 4.1e-13 49.2 0.0 7.1e-13 48.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|21226474|ref|NP_632396.1| - 3.1e-09 36.0 0.0 5.5e-09 35.2 0.0 1.4 1 1 0 1 1 1 1 MCM2/3/5 family AAA PF00004.24 gi|21226474|ref|NP_632396.1| - 1.5e-06 28.4 0.0 2.7e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|21226474|ref|NP_632396.1| - 0.00041 19.4 0.2 0.0036 16.3 0.1 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Sigma54_activat PF00158.21 gi|21226474|ref|NP_632396.1| - 0.00062 19.2 0.0 0.0019 17.6 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.9 gi|21226474|ref|NP_632396.1| - 0.032 14.1 0.0 0.06 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF3425 PF11905.3 gi|21226474|ref|NP_632396.1| - 0.11 12.3 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) DUF58 PF01882.13 gi|21226475|ref|NP_632397.1| - 1.7e-23 82.5 0.1 9.3e-23 80.1 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_2 PF13519.1 gi|21226475|ref|NP_632397.1| - 6.3e-09 36.1 0.0 9.5e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|21226475|ref|NP_632397.1| - 8.3e-07 28.3 0.0 1.5e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.23 gi|21226475|ref|NP_632397.1| - 0.0024 17.6 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain PaaX PF07848.7 gi|21226475|ref|NP_632397.1| - 0.026 14.5 0.0 0.051 13.5 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein BatA PF07584.6 gi|21226476|ref|NP_632398.1| - 2.3e-13 50.1 5.9 2.3e-13 50.1 4.1 1.7 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal DUF2194 PF09960.4 gi|21226476|ref|NP_632398.1| - 1e-07 30.4 0.0 1.8e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2194) VWA_2 PF13519.1 gi|21226476|ref|NP_632398.1| - 1e-06 29.0 0.6 3.6e-06 27.1 0.2 2.0 1 1 0 2 2 2 1 von Willebrand factor type A domain Glyco_hydro_42M PF08532.5 gi|21226476|ref|NP_632398.1| - 0.0012 18.0 0.0 0.0022 17.1 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase trimerisation domain ABC_transp_aux PF09822.4 gi|21226476|ref|NP_632398.1| - 0.029 13.8 0.0 0.061 12.7 0.0 1.6 1 1 0 1 1 1 0 ABC-type uncharacterized transport system DUF1355 PF07090.6 gi|21226476|ref|NP_632398.1| - 0.078 12.3 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1355) ThuA PF06283.6 gi|21226476|ref|NP_632398.1| - 0.11 12.2 0.0 3.2 7.4 0.0 2.2 2 0 0 2 2 2 0 Trehalose utilisation VWA_2 PF13519.1 gi|21226477|ref|NP_632399.1| - 1.2e-21 77.5 3.1 1e-15 58.2 0.0 3.4 2 1 1 3 3 3 2 von Willebrand factor type A domain DUF1355 PF07090.6 gi|21226477|ref|NP_632399.1| - 6.1e-10 38.7 0.0 1.9e-09 37.1 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1355) VWA PF00092.23 gi|21226477|ref|NP_632399.1| - 1.3e-06 28.2 2.2 0.0012 18.6 0.2 2.8 2 0 0 2 2 2 2 von Willebrand factor type A domain DUF4350 PF14258.1 gi|21226477|ref|NP_632399.1| - 0.00031 20.8 0.5 0.093 12.9 0.0 3.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4350) DUF4159 PF13709.1 gi|21226477|ref|NP_632399.1| - 0.0097 15.0 0.0 0.08 12.0 0.0 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4159) Usp PF00582.21 gi|21226477|ref|NP_632399.1| - 0.05 13.7 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Universal stress protein family ThuA PF06283.6 gi|21226477|ref|NP_632399.1| - 0.086 12.5 0.0 0.27 10.9 0.0 1.8 2 0 0 2 2 2 0 Trehalose utilisation CTP_transf_1 PF01148.15 gi|21226478|ref|NP_632400.1| - 2e-14 53.8 13.1 5.2e-11 42.7 1.8 2.4 1 1 1 2 2 2 2 Cytidylyltransferase family SNARE_assoc PF09335.6 gi|21226478|ref|NP_632400.1| - 0.034 14.3 0.7 0.034 14.3 0.5 1.9 2 0 0 2 2 2 0 SNARE associated Golgi protein DUF2061 PF09834.4 gi|21226478|ref|NP_632400.1| - 2.6 8.2 9.2 0.14 12.3 0.8 2.7 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) UPF0104 PF03706.8 gi|21226479|ref|NP_632401.1| - 6.2e-43 147.1 22.2 8.1e-43 146.7 15.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) NTP_transferase PF00483.18 gi|21226480|ref|NP_632402.1| - 3.7e-48 163.9 0.0 5e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|21226480|ref|NP_632402.1| - 4.5e-20 70.2 26.4 3.2e-08 32.7 1.2 5.1 1 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|21226480|ref|NP_632402.1| - 2e-09 37.7 0.0 3.1e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|21226480|ref|NP_632402.1| - 2.4e-09 36.5 25.9 0.00017 21.0 5.8 4.4 1 1 5 6 6 6 6 Hexapeptide repeat of succinyl-transferase Glycos_transf_2 PF00535.21 gi|21226480|ref|NP_632402.1| - 0.02 14.5 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Fucokinase PF07959.7 gi|21226480|ref|NP_632402.1| - 0.16 10.5 3.8 0.36 9.3 0.2 2.2 1 1 1 2 2 2 0 L-fucokinase tRNA_anti-codon PF01336.20 gi|21226481|ref|NP_632403.1| - 1.1e-08 34.7 0.0 1.4e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain FKBP_C PF00254.23 gi|21226482|ref|NP_632404.1| - 8.2e-27 93.0 0.2 1.2e-26 92.5 0.1 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.23 gi|21226483|ref|NP_632405.1| - 5.4e-30 103.2 0.5 8.5e-30 102.6 0.3 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.23 gi|21226484|ref|NP_632406.1| - 1.9e-29 101.5 0.9 2.6e-29 101.0 0.6 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1315 PF07023.7 gi|21226484|ref|NP_632406.1| - 0.057 13.3 0.0 0.13 12.1 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1315) DUF1648 PF07853.6 gi|21226485|ref|NP_632407.1| - 1.1e-21 76.1 0.4 1.1e-21 76.1 0.3 3.4 4 0 0 4 4 4 1 Protein of unknown function (DUF1648) SdpI PF13630.1 gi|21226485|ref|NP_632407.1| - 2.6e-19 68.7 2.1 2.6e-19 68.7 1.4 3.5 2 1 0 3 3 3 1 SdpI/YhfL protein family DUF3429 PF11911.3 gi|21226485|ref|NP_632407.1| - 0.061 13.2 0.3 0.061 13.2 0.2 2.3 2 2 1 3 3 3 0 Protein of unknown function (DUF3429) DUF2208 PF09973.4 gi|21226485|ref|NP_632407.1| - 0.57 9.3 11.3 0.69 9.1 1.3 2.6 3 0 0 3 3 3 0 Predicted membrane protein (DUF2208) ABC2_membrane_4 PF12730.2 gi|21226485|ref|NP_632407.1| - 2.6 7.1 23.0 8.9 5.4 2.8 2.9 1 1 2 3 3 3 0 ABC-2 family transporter protein Oxidored_q3 PF00499.15 gi|21226485|ref|NP_632407.1| - 2.9 7.6 10.6 1.8 8.3 5.1 2.0 1 1 1 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SHP PF03579.8 gi|21226485|ref|NP_632407.1| - 7.9 5.9 13.5 5.3 6.4 1.6 3.2 3 0 0 3 3 3 0 Small hydrophobic protein NosD PF05048.8 gi|21226486|ref|NP_632408.1| - 1.4e-52 178.2 27.1 1.4e-52 178.2 18.8 2.9 2 1 1 3 3 3 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226486|ref|NP_632408.1| - 4.7e-29 101.1 91.9 1.4e-15 57.3 21.5 3.4 2 1 2 4 4 4 3 Right handed beta helix region PKD PF00801.15 gi|21226486|ref|NP_632408.1| - 2.5e-14 52.7 20.3 5.4e-08 32.4 2.3 2.9 3 0 0 3 3 3 2 PKD domain Peptidase_S68 PF10461.4 gi|21226486|ref|NP_632408.1| - 0.016 14.9 0.0 0.039 13.6 0.0 1.6 1 0 0 1 1 1 0 Peptidase S68 Period_C PF12114.3 gi|21226486|ref|NP_632408.1| - 7.7 6.0 11.5 16 5.0 8.0 1.5 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF387 PF04079.11 gi|21226487|ref|NP_632409.1| - 0.0015 17.9 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) PadR PF03551.9 gi|21226487|ref|NP_632409.1| - 0.086 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|21226487|ref|NP_632409.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|21226487|ref|NP_632409.1| - 0.15 11.8 0.7 0.55 10.0 0.0 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Peptidase_M42 PF05343.9 gi|21226488|ref|NP_632410.1| - 0.02 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase PadR PF03551.9 gi|21226488|ref|NP_632410.1| - 0.028 14.1 0.0 0.054 13.2 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family MRP-L20 PF12824.2 gi|21226488|ref|NP_632410.1| - 0.1 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 Fer4 PF00037.22 gi|21226489|ref|NP_632411.1| - 1.5e-12 46.5 35.0 0.00024 20.5 2.7 5.7 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226489|ref|NP_632411.1| - 1.7e-12 46.5 28.2 0.00013 21.6 0.8 5.1 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21226489|ref|NP_632411.1| - 2.9e-11 43.5 32.0 1.9e-05 24.9 8.1 4.8 3 1 2 5 5 5 4 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226489|ref|NP_632411.1| - 6.6e-10 39.5 15.6 0.0016 19.1 0.1 4.9 4 0 0 4 4 4 3 4Fe-4S double cluster binding domain DAO PF01266.19 gi|21226489|ref|NP_632411.1| - 1.2e-09 37.5 0.0 5e-06 25.6 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|21226489|ref|NP_632411.1| - 2.6e-09 37.2 4.6 7.8e-07 29.1 0.3 3.7 3 2 1 4 4 3 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_2 PF12797.2 gi|21226489|ref|NP_632411.1| - 4.9e-09 35.5 30.5 0.0038 17.0 2.5 5.0 4 0 0 4 4 4 3 4Fe-4S binding domain FlpD PF02662.11 gi|21226489|ref|NP_632411.1| - 1.4e-08 34.4 0.1 7.7e-07 28.8 0.0 3.5 3 0 0 3 3 3 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4_10 PF13237.1 gi|21226489|ref|NP_632411.1| - 1.5e-08 34.2 24.4 3e-06 26.9 6.7 3.5 4 0 0 4 4 2 2 4Fe-4S dicluster domain FAD_oxidored PF12831.2 gi|21226489|ref|NP_632411.1| - 4.1e-08 32.7 0.1 6.1e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer4_9 PF13187.1 gi|21226489|ref|NP_632411.1| - 8.9e-08 32.2 35.8 4.7e-05 23.5 6.6 4.2 3 2 1 4 4 4 3 4Fe-4S dicluster domain Pyr_redox_3 PF13738.1 gi|21226489|ref|NP_632411.1| - 1e-07 32.2 0.2 0.00022 21.3 0.1 3.2 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|21226489|ref|NP_632411.1| - 2.7e-07 29.8 0.2 4.9e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.1 gi|21226489|ref|NP_632411.1| - 2.4e-06 27.4 0.1 5.4e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|21226489|ref|NP_632411.1| - 1.1e-05 24.5 0.1 2e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|21226489|ref|NP_632411.1| - 3e-05 23.2 0.1 5.7e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 Thi4 family Fer4_21 PF14697.1 gi|21226489|ref|NP_632411.1| - 8.3e-05 22.3 37.1 0.0067 16.2 4.9 4.6 4 1 0 4 4 3 3 4Fe-4S dicluster domain FAD_binding_3 PF01494.14 gi|21226489|ref|NP_632411.1| - 0.00015 20.9 0.4 0.00023 20.3 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain Fer4_18 PF13746.1 gi|21226489|ref|NP_632411.1| - 0.0011 19.3 23.2 0.0082 16.5 0.7 4.7 4 0 0 4 4 4 2 4Fe-4S dicluster domain HI0933_like PF03486.9 gi|21226489|ref|NP_632411.1| - 0.0015 17.1 0.9 0.0026 16.2 0.6 1.4 1 0 0 1 1 1 1 HI0933-like protein Fer4_8 PF13183.1 gi|21226489|ref|NP_632411.1| - 0.0018 18.2 22.9 0.0041 17.1 7.3 4.7 4 2 2 6 6 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226489|ref|NP_632411.1| - 0.0036 17.6 32.5 0.083 13.2 2.5 5.4 5 2 0 5 5 4 3 4Fe-4S dicluster domain Pyr_redox PF00070.22 gi|21226489|ref|NP_632411.1| - 0.0046 17.3 0.3 0.15 12.4 0.1 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.19 gi|21226489|ref|NP_632411.1| - 0.039 13.0 0.0 0.075 12.0 0.0 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Fer4_4 PF12800.2 gi|21226489|ref|NP_632411.1| - 0.14 12.5 44.8 0.03 14.6 3.6 5.8 5 0 0 5 5 5 0 4Fe-4S binding domain Trp_halogenase PF04820.9 gi|21226489|ref|NP_632411.1| - 0.43 9.1 0.5 1.3 7.6 0.3 1.7 2 0 0 2 2 2 0 Tryptophan halogenase Fer4_15 PF13459.1 gi|21226489|ref|NP_632411.1| - 0.84 10.2 22.7 0.58 10.7 0.2 4.8 4 1 0 4 4 4 0 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|21226490|ref|NP_632412.1| - 2.4e-11 43.4 7.6 4.7e-11 42.5 5.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226490|ref|NP_632412.1| - 2.6e-09 37.3 9.0 5.4e-09 36.2 6.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226490|ref|NP_632412.1| - 2.1e-07 31.0 8.2 4.9e-07 29.9 5.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226490|ref|NP_632412.1| - 1.3e-06 28.7 8.0 2.6e-06 27.7 5.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21226490|ref|NP_632412.1| - 5.2e-06 26.1 9.7 1.4e-05 24.7 6.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226490|ref|NP_632412.1| - 4.7e-05 23.0 11.0 0.00018 21.2 2.5 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21226490|ref|NP_632412.1| - 0.00021 21.6 6.6 0.0051 17.2 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21226490|ref|NP_632412.1| - 0.00022 21.2 2.3 0.00022 21.2 1.6 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4 PF00037.22 gi|21226490|ref|NP_632412.1| - 0.00038 19.9 12.2 0.0011 18.4 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226490|ref|NP_632412.1| - 0.0005 19.8 2.9 0.0005 19.8 2.0 2.7 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21226490|ref|NP_632412.1| - 0.0053 16.5 8.3 0.017 14.9 5.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226490|ref|NP_632412.1| - 0.055 13.8 0.4 0.055 13.8 0.3 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|21226490|ref|NP_632412.1| - 0.19 12.4 13.7 1.8 9.3 9.2 2.5 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain CCG PF02754.11 gi|21226491|ref|NP_632413.1| - 3.1e-17 62.3 9.0 9.6e-09 35.1 2.0 2.7 3 0 0 3 3 3 2 Cysteine-rich domain Lipocalin PF00061.18 gi|21226491|ref|NP_632413.1| - 0.088 12.7 0.0 0.7 9.8 0.0 2.1 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Lactonase PF10282.4 gi|21226492|ref|NP_632414.1| - 1.1e-16 60.8 7.7 2.4e-05 23.6 0.5 4.0 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21226492|ref|NP_632414.1| - 3.1e-13 48.7 7.4 9.5e-07 27.4 0.7 3.1 1 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.16 gi|21226492|ref|NP_632414.1| - 8.4e-10 38.1 26.5 0.0043 16.9 0.2 7.6 8 0 0 8 8 8 3 NHL repeat SGL PF08450.7 gi|21226492|ref|NP_632414.1| - 1.7e-08 34.1 10.8 0.0011 18.3 4.0 4.2 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region PD40 PF07676.7 gi|21226492|ref|NP_632414.1| - 6.1e-05 22.5 0.8 2.9 7.6 0.0 4.6 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Kelch_6 PF13964.1 gi|21226492|ref|NP_632414.1| - 0.00013 21.9 9.3 13 6.1 0.1 6.5 5 2 2 7 7 7 1 Kelch motif Arylesterase PF01731.15 gi|21226492|ref|NP_632414.1| - 0.00023 21.0 4.2 0.54 10.2 0.1 4.8 3 3 2 5 5 5 1 Arylesterase SBP56 PF05694.6 gi|21226492|ref|NP_632414.1| - 0.0035 15.9 0.4 3.2 6.1 0.0 3.9 1 1 2 4 4 4 1 56kDa selenium binding protein (SBP56) DUF1513 PF07433.6 gi|21226492|ref|NP_632414.1| - 0.056 12.3 1.2 1.2 7.9 0.0 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1513) Ldl_recept_b PF00058.12 gi|21226492|ref|NP_632414.1| - 0.1 12.9 0.5 41 4.6 0.0 3.5 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B PQQ PF01011.16 gi|21226492|ref|NP_632414.1| - 0.58 9.8 9.4 7.2 6.3 0.0 4.6 5 0 0 5 5 5 0 PQQ enzyme repeat LVIVD PF08309.6 gi|21226493|ref|NP_632415.1| - 2.1e-272 877.9 125.5 1.1e-22 78.7 1.4 14.2 12 2 2 14 14 14 14 LVIVD repeat Beta_propel PF09826.4 gi|21226493|ref|NP_632415.1| - 5.5e-16 58.0 10.8 0.063 11.6 0.0 9.1 1 1 6 8 8 8 7 Beta propeller domain PKD PF00801.15 gi|21226493|ref|NP_632415.1| - 9.2e-15 54.1 3.5 2.3e-14 52.8 2.4 1.7 1 0 0 1 1 1 1 PKD domain PQQ_3 PF13570.1 gi|21226493|ref|NP_632415.1| - 5e-05 23.4 91.9 0.15 12.3 2.3 14.2 15 0 0 15 15 15 7 PQQ-like domain DUF4263 PF14082.1 gi|21226493|ref|NP_632415.1| - 0.0013 18.7 0.0 87 3.0 0.0 6.9 4 3 7 11 11 11 0 Domain of unknown function (DUF4263) CPSF_A PF03178.10 gi|21226493|ref|NP_632415.1| - 0.0035 16.4 0.7 1 8.3 0.0 3.9 3 1 1 4 4 4 1 CPSF A subunit region DUF1236 PF06823.7 gi|21226493|ref|NP_632415.1| - 1.5 8.5 23.5 1.5 8.6 0.1 6.8 8 0 0 8 8 8 0 Protein of unknown function (DUF1236) MutL_C PF08676.6 gi|21226493|ref|NP_632415.1| - 1.6 8.3 3.6 1.7e+02 1.7 0.0 5.2 8 0 0 8 8 8 0 MutL C terminal dimerisation domain CCG PF02754.11 gi|21226494|ref|NP_632416.1| - 0.00015 21.6 0.0 0.00028 20.8 0.0 1.4 2 0 0 2 2 2 1 Cysteine-rich domain UPF0228 PF05727.6 gi|21226495|ref|NP_632417.1| - 2.1e-45 153.5 3.4 3.1e-45 153.0 2.4 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) Peptidase_C39_2 PF13529.1 gi|21226496|ref|NP_632418.1| - 1.2e-07 32.2 2.7 1.9e-07 31.5 0.3 2.4 2 1 1 3 3 3 1 Peptidase_C39 like family CENP-H PF05837.7 gi|21226496|ref|NP_632418.1| - 0.048 13.8 0.4 0.085 13.0 0.3 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Lactonase PF10282.4 gi|21226497|ref|NP_632419.1| - 1.3e-17 63.8 10.6 9.5e-08 31.4 0.2 3.2 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21226497|ref|NP_632419.1| - 4.1e-10 38.5 5.4 3.8e-08 32.0 2.8 2.8 1 1 1 2 2 2 1 Cytochrome D1 heme domain SGL PF08450.7 gi|21226497|ref|NP_632419.1| - 1.2e-09 37.9 13.9 0.00042 19.7 1.4 3.2 1 1 1 2 2 2 2 SMP-30/Gluconolaconase/LRE-like region NHL PF01436.16 gi|21226497|ref|NP_632419.1| - 1.4e-08 34.2 20.4 0.024 14.6 0.6 7.4 8 0 0 8 8 8 4 NHL repeat Arylesterase PF01731.15 gi|21226497|ref|NP_632419.1| - 4.2e-05 23.4 4.6 0.059 13.3 0.1 4.2 2 1 2 4 4 4 2 Arylesterase DUF3312 PF11768.3 gi|21226497|ref|NP_632419.1| - 0.011 14.0 0.1 0.13 10.4 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3312) Ldl_recept_b PF00058.12 gi|21226497|ref|NP_632419.1| - 0.016 15.5 0.9 0.13 12.6 0.1 2.9 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B Str_synth PF03088.11 gi|21226497|ref|NP_632419.1| - 0.047 13.7 0.1 12 6.0 0.0 3.4 2 1 0 3 3 3 0 Strictosidine synthase Me-amine-dh_H PF06433.6 gi|21226497|ref|NP_632419.1| - 0.05 12.2 6.2 0.46 9.0 0.1 3.7 1 1 2 4 4 4 0 Methylamine dehydrogenase heavy chain (MADH) DUF4102 PF13356.1 gi|21226497|ref|NP_632419.1| - 0.081 12.8 0.0 63 3.5 0.0 4.2 2 2 3 5 5 5 0 Domain of unknown function (DUF4102) DDE_Tnp_IS66 PF03050.9 gi|21226498|ref|NP_632420.1| - 2.2e-72 243.5 0.0 2.6e-72 243.3 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21226498|ref|NP_632420.1| - 1.4e-10 41.0 4.0 3.5e-10 39.7 2.8 1.7 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21226498|ref|NP_632420.1| - 1.9e-06 27.8 5.2 0.0039 17.1 0.1 3.1 3 0 0 3 3 3 2 DDE domain DZR PF12773.2 gi|21226498|ref|NP_632420.1| - 0.013 15.2 1.6 0.047 13.5 0.6 2.4 2 0 0 2 2 2 0 Double zinc ribbon Apolipoprotein PF01442.13 gi|21226498|ref|NP_632420.1| - 0.027 13.9 0.5 0.044 13.2 0.4 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21226498|ref|NP_632420.1| - 0.09 12.5 1.7 0.53 10.1 0.9 2.6 2 1 0 2 2 2 0 FIP domain zf-ribbon_3 PF13248.1 gi|21226498|ref|NP_632420.1| - 0.13 11.5 4.2 0.39 9.9 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DUF164 PF02591.10 gi|21226498|ref|NP_632420.1| - 0.14 11.9 0.1 0.14 11.9 0.1 2.1 2 0 0 2 2 1 0 Putative zinc ribbon domain zf-RING_5 PF14634.1 gi|21226498|ref|NP_632420.1| - 0.3 10.8 6.5 1.4 8.7 0.0 3.2 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21226498|ref|NP_632420.1| - 0.54 9.8 6.9 1.8 8.1 0.2 2.9 2 0 0 2 2 2 0 zinc-ribbon domain Takusan PF04822.8 gi|21226498|ref|NP_632420.1| - 1.4 8.6 6.7 0.22 11.3 1.8 1.8 2 0 0 2 2 2 0 Takusan Mut7-C PF01927.11 gi|21226498|ref|NP_632420.1| - 2.6 7.9 5.8 0.53 10.2 1.3 1.9 2 0 0 2 2 2 0 Mut7-C RNAse domain DnaB_C PF03796.10 gi|21226499|ref|NP_632421.1| - 0.0078 15.1 0.0 0.0086 14.9 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AKNA PF12443.3 gi|21226499|ref|NP_632421.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor Peptidase_C39_2 PF13529.1 gi|21226500|ref|NP_632422.1| - 6.8e-09 36.2 3.3 1.2e-08 35.4 0.1 2.8 2 2 0 2 2 2 1 Peptidase_C39 like family CCG PF02754.11 gi|21226501|ref|NP_632423.1| - 8.8e-05 22.4 0.0 0.00017 21.5 0.0 1.5 2 0 0 2 2 2 1 Cysteine-rich domain UPF0228 PF05727.6 gi|21226502|ref|NP_632424.1| - 4.5e-54 181.5 5.3 5.1e-54 181.4 3.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) UPF0228 PF05727.6 gi|21226503|ref|NP_632425.1| - 5.4e-48 161.9 4.4 9e-48 161.2 3.1 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) ETRAMP PF09716.5 gi|21226503|ref|NP_632425.1| - 0.02 14.8 0.0 0.074 13.0 0.0 2.0 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) tRNA_anti-like PF12869.2 gi|21226503|ref|NP_632425.1| - 0.37 10.2 2.2 9.7 5.6 0.0 2.4 3 0 0 3 3 3 0 tRNA_anti-like Internalin_N PF12354.3 gi|21226503|ref|NP_632425.1| - 0.5 10.0 2.8 1.2 8.8 1.9 1.6 1 0 0 1 1 1 0 Bacterial adhesion/invasion protein N terminal Peptidase_C39_2 PF13529.1 gi|21226504|ref|NP_632426.1| - 8.7e-09 35.8 0.6 3.5e-08 33.9 0.4 2.1 1 0 0 1 1 1 1 Peptidase_C39 like family CENP-H PF05837.7 gi|21226504|ref|NP_632426.1| - 0.031 14.4 0.6 0.077 13.1 0.4 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) CCG PF02754.11 gi|21226505|ref|NP_632427.1| - 6.5e-05 22.8 0.0 0.00014 21.8 0.0 1.5 2 0 0 2 2 2 1 Cysteine-rich domain Cytochrom_C1 PF02167.10 gi|21226505|ref|NP_632427.1| - 0.13 11.8 0.1 0.16 11.6 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C1 family FTR PF01913.13 gi|21226506|ref|NP_632428.1| - 0.072 12.8 0.0 0.078 12.6 0.0 1.0 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase Lactonase PF10282.4 gi|21226507|ref|NP_632429.1| - 1.6e-20 73.4 4.2 9.2e-10 38.1 1.6 3.6 1 1 0 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21226507|ref|NP_632429.1| - 2.6e-11 42.4 6.6 0.00045 18.6 0.1 4.0 1 1 3 4 4 4 3 Cytochrome D1 heme domain SGL PF08450.7 gi|21226507|ref|NP_632429.1| - 1.6e-07 31.0 10.0 0.0041 16.5 0.6 3.8 1 1 1 3 3 3 3 SMP-30/Gluconolaconase/LRE-like region PD40 PF07676.7 gi|21226507|ref|NP_632429.1| - 1.4e-06 27.8 0.1 2.8 7.6 0.0 4.9 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.15 gi|21226507|ref|NP_632429.1| - 5.3e-06 26.3 14.4 0.11 12.5 0.1 6.8 3 2 4 8 8 7 2 Arylesterase NHL PF01436.16 gi|21226507|ref|NP_632429.1| - 2e-05 24.3 19.1 1.4 9.0 0.0 8.0 9 0 0 9 9 8 2 NHL repeat Thioredox_DsbH PF03190.10 gi|21226507|ref|NP_632429.1| - 7.8e-05 22.4 0.2 4.2 7.0 0.0 4.2 3 2 1 4 4 4 1 Protein of unknown function, DUF255 DUF1513 PF07433.6 gi|21226507|ref|NP_632429.1| - 0.0068 15.3 1.8 0.024 13.5 0.1 2.3 1 1 0 2 2 2 1 Protein of unknown function (DUF1513) PQQ_3 PF13570.1 gi|21226507|ref|NP_632429.1| - 0.017 15.3 24.1 5.1 7.5 0.7 6.7 7 0 0 7 7 6 0 PQQ-like domain PBCV_basic_adap PF08789.5 gi|21226507|ref|NP_632429.1| - 0.021 14.4 7.4 28 4.4 0.0 5.7 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain SBP56 PF05694.6 gi|21226507|ref|NP_632429.1| - 0.027 12.9 0.1 25 3.1 0.0 3.9 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) DUF4380 PF14315.1 gi|21226507|ref|NP_632429.1| - 0.033 13.3 2.4 0.37 9.9 0.2 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4380) Kelch_6 PF13964.1 gi|21226507|ref|NP_632429.1| - 0.078 13.1 9.9 5.1 7.4 0.1 6.0 5 1 1 6 6 6 0 Kelch motif HIRA_B PF09453.5 gi|21226507|ref|NP_632429.1| - 0.094 12.2 2.8 12 5.5 0.0 3.5 3 0 0 3 3 3 0 HIRA B motif PapD_N PF00345.15 gi|21226507|ref|NP_632429.1| - 1.1 9.0 5.1 0.98 9.2 0.2 2.9 3 0 0 3 3 3 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain Peptidase_C39_2 PF13529.1 gi|21226508|ref|NP_632430.1| - 2.7e-08 34.2 0.5 9.1e-08 32.5 0.0 2.1 2 1 0 2 2 2 1 Peptidase_C39 like family Peptidase_C39 PF03412.10 gi|21226508|ref|NP_632430.1| - 0.0092 15.7 0.1 0.029 14.1 0.0 1.9 2 0 0 2 2 2 1 Peptidase C39 family CutC PF03932.9 gi|21226508|ref|NP_632430.1| - 0.025 13.8 0.0 0.038 13.2 0.0 1.2 1 0 0 1 1 1 0 CutC family CCG PF02754.11 gi|21226509|ref|NP_632431.1| - 9.3e-05 22.3 0.0 0.00017 21.5 0.0 1.4 1 0 0 1 1 1 1 Cysteine-rich domain Pyridox_oxidase PF01243.15 gi|21226510|ref|NP_632432.1| - 3.2e-10 39.9 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Trehalose_PPase PF02358.11 gi|21226510|ref|NP_632432.1| - 0.067 12.0 0.0 0.088 11.7 0.0 1.2 1 0 0 1 1 1 0 Trehalose-phosphatase Aconitase PF00330.15 gi|21226511|ref|NP_632433.1| - 7.6e-88 295.0 0.2 8.3e-59 199.2 0.0 2.3 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.8 gi|21226511|ref|NP_632433.1| - 0.015 13.8 0.0 0.024 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) WH2 PF02205.15 gi|21226511|ref|NP_632433.1| - 0.084 12.5 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 WH2 motif GIT1_C PF12205.3 gi|21226512|ref|NP_632434.1| - 0.054 13.3 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term ABC_tran_2 PF12848.2 gi|21226512|ref|NP_632434.1| - 0.17 11.7 2.0 0.49 10.2 1.4 1.7 1 1 0 1 1 1 0 ABC transporter Mod_r PF07200.8 gi|21226513|ref|NP_632435.1| - 0.03 14.2 1.8 0.14 12.0 0.0 2.7 2 1 1 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DivIC PF04977.10 gi|21226513|ref|NP_632435.1| - 6.1 6.4 6.8 0.53 9.8 0.5 2.2 2 0 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.17 gi|21226513|ref|NP_632435.1| - 7.9 6.5 11.1 0.27 11.2 0.3 2.8 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain T2SF PF00482.18 gi|21226514|ref|NP_632436.1| - 4.5e-26 91.1 11.4 4e-21 75.1 0.0 3.4 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F MscS_TM PF12794.2 gi|21226514|ref|NP_632436.1| - 0.0047 15.5 2.3 0.0047 15.5 1.6 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 Rifin_STEVOR PF02009.11 gi|21226514|ref|NP_632436.1| - 0.015 14.9 0.3 0.026 14.1 0.2 1.4 1 0 0 1 1 1 0 Rifin/stevor family DUF843 PF05814.6 gi|21226514|ref|NP_632436.1| - 0.02 14.6 3.4 0.02 14.6 2.4 1.9 2 0 0 2 2 2 0 Baculovirus protein of unknown function (DUF843) PrgI PF12666.2 gi|21226514|ref|NP_632436.1| - 1.2 9.3 5.7 0.33 11.1 0.8 2.5 2 0 0 2 2 2 0 PrgI family protein T2SE PF00437.15 gi|21226515|ref|NP_632437.1| - 3.2e-46 157.4 0.0 4.4e-46 156.9 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|21226515|ref|NP_632437.1| - 1.9e-05 24.1 0.0 5.7e-05 22.5 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|21226515|ref|NP_632437.1| - 0.0048 17.2 0.0 0.019 15.2 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.1 gi|21226515|ref|NP_632437.1| - 0.093 12.7 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain KaiC PF06745.8 gi|21226516|ref|NP_632438.1| - 1.4e-22 79.9 0.0 1.7e-22 79.7 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|21226516|ref|NP_632438.1| - 4.9e-11 42.3 0.0 7.3e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21226516|ref|NP_632438.1| - 0.0002 21.1 0.0 0.00029 20.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase RecA PF00154.16 gi|21226516|ref|NP_632438.1| - 0.0015 17.6 0.0 0.0026 16.8 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein PAXNEB PF05625.6 gi|21226516|ref|NP_632438.1| - 0.0078 15.0 0.3 0.016 14.0 0.1 1.6 1 1 1 2 2 2 1 PAXNEB protein AAA_35 PF14516.1 gi|21226516|ref|NP_632438.1| - 0.013 14.1 0.0 0.021 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_14 PF13173.1 gi|21226516|ref|NP_632438.1| - 0.016 15.1 0.2 0.055 13.3 0.2 2.0 1 1 0 1 1 1 0 AAA domain DAP3 PF10236.4 gi|21226516|ref|NP_632438.1| - 0.028 13.3 0.0 0.049 12.5 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Cas_DxTHG PF09455.5 gi|21226516|ref|NP_632438.1| - 0.042 13.0 0.1 0.057 12.5 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family AAA_22 PF13401.1 gi|21226516|ref|NP_632438.1| - 0.069 13.2 0.0 0.14 12.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.1 gi|21226516|ref|NP_632438.1| - 0.076 12.0 0.3 0.15 11.0 0.2 1.4 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.13 gi|21226516|ref|NP_632438.1| - 0.085 12.3 0.0 0.2 11.1 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF835 PF05763.7 gi|21226516|ref|NP_632438.1| - 0.11 12.0 0.3 0.25 10.9 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF835) NPP PF08384.5 gi|21226516|ref|NP_632438.1| - 0.4 10.3 2.5 3.9 7.2 0.4 2.4 2 0 0 2 2 2 0 Pro-opiomelanocortin, N-terminal region Arch_flagellin PF01917.11 gi|21226518|ref|NP_632440.1| - 4.5e-05 23.1 0.0 8e-05 22.3 0.0 1.4 1 1 1 2 2 2 1 Archaebacterial flagellin Arch_fla_DE PF04659.8 gi|21226519|ref|NP_632441.1| - 0.00044 19.9 0.1 0.0015 18.2 0.0 1.9 1 1 1 2 2 2 1 Archaeal flagella protein Arch_flagellin PF01917.11 gi|21226520|ref|NP_632442.1| - 2.9e-21 75.9 9.9 2.7e-20 72.7 6.9 1.9 1 1 0 1 1 1 1 Archaebacterial flagellin TPP_enzyme_C PF02775.16 gi|21226521|ref|NP_632443.1| - 4.7e-29 100.9 0.0 7.2e-29 100.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|21226521|ref|NP_632443.1| - 1.6e-28 98.4 0.3 2.7e-28 97.6 0.2 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.14 gi|21226522|ref|NP_632444.1| - 1.3e-55 188.3 0.0 1.9e-55 187.8 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|21226522|ref|NP_632444.1| - 6.6e-42 143.3 0.0 1.2e-41 142.5 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase OrfB_IS605 PF01385.14 gi|21226523|ref|NP_632445.1| - 5.6e-48 163.2 3.3 5.6e-48 163.2 2.3 1.6 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|21226523|ref|NP_632445.1| - 6.2e-24 83.4 1.4 6.7e-24 83.3 0.1 1.7 2 0 0 2 2 2 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.3 gi|21226523|ref|NP_632445.1| - 1.4e-21 75.5 0.3 2.6e-21 74.6 0.2 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DZR PF12773.2 gi|21226523|ref|NP_632445.1| - 0.055 13.2 0.6 0.11 12.3 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-piccolo PF05715.8 gi|21226523|ref|NP_632445.1| - 0.063 13.3 1.2 0.11 12.4 0.4 1.7 2 0 0 2 2 2 0 Piccolo Zn-finger A2L_zn_ribbon PF08792.5 gi|21226523|ref|NP_632445.1| - 0.08 12.4 1.7 0.17 11.3 1.2 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain HypA PF01155.14 gi|21226523|ref|NP_632445.1| - 0.1 12.2 0.1 0.25 11.0 0.0 1.7 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Rubredoxin PF00301.15 gi|21226523|ref|NP_632445.1| - 0.91 9.4 6.2 10 6.0 4.3 2.4 1 1 0 1 1 1 0 Rubredoxin zf-RanBP PF00641.13 gi|21226523|ref|NP_632445.1| - 1.3 8.2 6.8 7.7 5.7 0.1 2.6 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Rep_fac-A_C PF08646.5 gi|21226523|ref|NP_632445.1| - 2 8.1 6.4 12 5.5 0.0 3.2 1 1 0 3 3 3 0 Replication factor-A C terminal domain Y1_Tnp PF01797.11 gi|21226524|ref|NP_632446.1| - 1.5e-35 121.6 1.9 1.7e-35 121.4 1.3 1.0 1 0 0 1 1 1 1 Transposase IS200 like DUF1699 PF08004.6 gi|21226525|ref|NP_632447.1| - 1.1e-67 225.5 1.1 1.3e-67 225.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21226525|ref|NP_632447.1| - 0.039 14.2 0.3 0.11 12.7 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif Nicastrin PF05450.10 gi|21226525|ref|NP_632447.1| - 0.11 11.6 0.1 0.14 11.3 0.1 1.1 1 0 0 1 1 1 0 Nicastrin Metalloenzyme PF01676.13 gi|21226525|ref|NP_632447.1| - 0.11 11.8 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily Histidinol_dh PF00815.15 gi|21226526|ref|NP_632448.1| - 3.8e-170 565.9 4.4 4.5e-170 565.7 3.1 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Peptidase_S68 PF10461.4 gi|21226526|ref|NP_632448.1| - 0.066 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Peptidase S68 DEAD PF00270.24 gi|21226527|ref|NP_632449.1| - 1.6e-28 99.2 0.0 5e-28 97.6 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21226527|ref|NP_632449.1| - 1.3e-08 34.5 0.0 2.7e-08 33.5 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HHH_5 PF14520.1 gi|21226527|ref|NP_632449.1| - 2.4e-07 30.8 1.5 9.8e-07 28.8 0.0 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix domain ResIII PF04851.10 gi|21226527|ref|NP_632449.1| - 6.3e-05 22.8 0.0 0.00017 21.4 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Sec63 PF02889.11 gi|21226527|ref|NP_632449.1| - 0.00065 19.0 0.0 0.0011 18.2 0.0 1.3 1 0 0 1 1 1 1 Sec63 Brl domain HHH_2 PF12826.2 gi|21226527|ref|NP_632449.1| - 0.0066 16.3 0.0 0.025 14.4 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif gpUL132 PF11359.3 gi|21226527|ref|NP_632449.1| - 0.049 12.9 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Glycoprotein UL132 Cdd1 PF11731.3 gi|21226527|ref|NP_632449.1| - 0.071 13.0 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DUF4332 PF14229.1 gi|21226527|ref|NP_632449.1| - 0.12 12.3 0.0 0.33 10.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.4 gi|21226527|ref|NP_632449.1| - 0.13 11.8 0.0 0.31 10.6 0.0 1.7 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda ABC_tran PF00005.22 gi|21226528|ref|NP_632450.1| - 2.1e-38 131.6 0.0 4.7e-19 69.0 0.1 2.9 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.14 gi|21226528|ref|NP_632450.1| - 1.9e-15 56.6 8.1 2e-05 23.9 0.0 4.1 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain RLI PF04068.10 gi|21226528|ref|NP_632450.1| - 2.5e-12 46.1 4.0 4.7e-12 45.2 2.8 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.1 gi|21226528|ref|NP_632450.1| - 4.1e-12 46.6 6.1 1.6e-06 28.3 0.1 4.4 4 1 0 4 4 3 2 AAA domain Fer4 PF00037.22 gi|21226528|ref|NP_632450.1| - 3.8e-08 32.6 4.5 3.8e-08 32.6 3.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_16 PF13191.1 gi|21226528|ref|NP_632450.1| - 1.8e-06 28.0 0.0 0.0087 16.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain Fer4_6 PF12837.2 gi|21226528|ref|NP_632450.1| - 5e-06 26.1 12.1 1.7e-05 24.4 1.9 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_29 PF13555.1 gi|21226528|ref|NP_632450.1| - 7.6e-06 25.3 2.5 0.016 14.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|21226528|ref|NP_632450.1| - 9.4e-06 26.0 0.9 0.039 14.2 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.1 gi|21226528|ref|NP_632450.1| - 1e-05 25.0 1.8 0.014 14.8 0.0 3.0 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.1 gi|21226528|ref|NP_632450.1| - 4.3e-05 23.6 1.0 0.013 15.6 0.0 2.9 3 0 0 3 3 3 1 AAA domain Rad17 PF03215.10 gi|21226528|ref|NP_632450.1| - 0.00011 21.0 0.5 0.23 10.0 0.0 2.2 2 0 0 2 2 2 2 Rad17 cell cycle checkpoint protein Fer4_9 PF13187.1 gi|21226528|ref|NP_632450.1| - 0.00017 21.7 10.4 0.00032 20.8 7.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain RNA_helicase PF00910.17 gi|21226528|ref|NP_632450.1| - 0.00017 21.7 0.0 0.42 10.8 0.0 2.5 2 0 0 2 2 2 2 RNA helicase Fer4_21 PF14697.1 gi|21226528|ref|NP_632450.1| - 0.00025 20.8 7.4 0.00044 20.0 5.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226528|ref|NP_632450.1| - 0.00035 20.8 9.8 0.00082 19.7 6.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain NACHT PF05729.7 gi|21226528|ref|NP_632450.1| - 0.00043 19.9 0.1 0.062 12.9 0.0 2.7 3 0 0 3 3 3 1 NACHT domain Fer4_2 PF12797.2 gi|21226528|ref|NP_632450.1| - 0.00071 19.3 3.0 0.00071 19.3 2.1 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_17 PF13207.1 gi|21226528|ref|NP_632450.1| - 0.0012 19.6 1.5 0.041 14.6 0.0 2.8 2 2 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|21226528|ref|NP_632450.1| - 0.0033 16.9 0.9 0.32 10.3 0.0 2.7 3 0 0 3 3 3 1 AAA-like domain AAA PF00004.24 gi|21226528|ref|NP_632450.1| - 0.0033 17.6 0.1 0.34 11.1 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.1 gi|21226528|ref|NP_632450.1| - 0.0038 16.3 0.3 0.091 11.7 0.0 2.8 3 0 0 3 3 3 1 AAA ATPase domain AAA_14 PF13173.1 gi|21226528|ref|NP_632450.1| - 0.0049 16.7 1.2 2 8.3 0.0 3.3 3 0 0 3 3 3 1 AAA domain DUF258 PF03193.11 gi|21226528|ref|NP_632450.1| - 0.0068 15.6 7.6 0.059 12.5 0.0 2.7 3 0 0 3 3 2 2 Protein of unknown function, DUF258 Fer4_10 PF13237.1 gi|21226528|ref|NP_632450.1| - 0.0068 16.1 12.1 0.0088 15.8 1.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain SbcCD_C PF13558.1 gi|21226528|ref|NP_632450.1| - 0.008 16.0 0.0 2.4 8.1 0.0 2.6 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit VirE PF05272.6 gi|21226528|ref|NP_632450.1| - 0.013 15.0 0.1 1.3 8.4 0.0 2.3 2 0 0 2 2 2 0 Virulence-associated protein E MobB PF03205.9 gi|21226528|ref|NP_632450.1| - 0.013 15.1 2.3 0.35 10.5 0.0 3.1 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B Miro PF08477.8 gi|21226528|ref|NP_632450.1| - 0.016 15.6 0.3 0.27 11.7 0.0 2.4 2 0 0 2 2 2 0 Miro-like protein AAA_5 PF07728.9 gi|21226528|ref|NP_632450.1| - 0.024 14.3 1.2 13 5.5 0.0 3.2 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|21226528|ref|NP_632450.1| - 0.027 14.7 0.9 7.2 6.9 0.2 3.3 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|21226528|ref|NP_632450.1| - 0.036 14.0 0.1 1.2 9.1 0.0 2.6 2 2 0 2 2 2 0 50S ribosome-binding GTPase Fer4_4 PF12800.2 gi|21226528|ref|NP_632450.1| - 0.04 14.2 13.1 0.041 14.2 1.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain ArgK PF03308.11 gi|21226528|ref|NP_632450.1| - 0.044 12.5 3.4 0.92 8.2 0.2 2.2 2 0 0 2 2 2 0 ArgK protein DUF87 PF01935.12 gi|21226528|ref|NP_632450.1| - 0.048 13.4 3.0 1.4 8.6 0.0 2.7 3 0 0 3 3 2 0 Domain of unknown function DUF87 NTPase_1 PF03266.10 gi|21226528|ref|NP_632450.1| - 0.055 13.1 1.9 2.4 7.8 0.0 3.1 3 0 0 3 3 3 0 NTPase Fer4_16 PF13484.1 gi|21226528|ref|NP_632450.1| - 0.066 13.9 0.5 0.066 13.9 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21226528|ref|NP_632450.1| - 0.16 12.0 7.8 0.47 10.5 5.4 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain AAA_24 PF13479.1 gi|21226528|ref|NP_632450.1| - 0.34 10.4 2.9 4.8 6.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain Fer4_11 PF13247.1 gi|21226528|ref|NP_632450.1| - 0.43 10.5 4.6 0.78 9.6 3.2 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain AAA_33 PF13671.1 gi|21226528|ref|NP_632450.1| - 0.9 9.4 4.9 1.5 8.6 0.0 3.1 4 0 0 4 4 2 0 AAA domain SRP54 PF00448.17 gi|21226528|ref|NP_632450.1| - 0.97 8.8 2.6 12 5.2 0.0 2.7 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain Fer4_18 PF13746.1 gi|21226528|ref|NP_632450.1| - 1.9 8.9 8.8 7.3 7.1 6.1 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21226528|ref|NP_632450.1| - 2.9 8.6 14.9 0.12 12.9 3.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain BacA PF02673.13 gi|21226529|ref|NP_632451.1| - 0.008 15.4 0.1 0.0095 15.1 0.0 1.1 1 0 0 1 1 1 1 Bacitracin resistance protein BacA ATPase_gene1 PF09527.5 gi|21226529|ref|NP_632451.1| - 0.13 12.1 1.8 0.25 11.1 1.2 1.4 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit (ATPase_gene1) Rab5ip PF07019.7 gi|21226529|ref|NP_632451.1| - 9.6 6.4 8.9 27 5.0 6.2 1.7 1 1 0 1 1 1 0 Rab5-interacting protein (Rab5ip) Lactamase_B_2 PF12706.2 gi|21226530|ref|NP_632452.1| - 3.1e-10 39.9 0.5 9.1e-10 38.3 0.1 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21226530|ref|NP_632452.1| - 6.3e-05 22.7 0.5 0.00013 21.6 0.4 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|21226530|ref|NP_632452.1| - 0.0017 18.0 0.1 0.007 16.0 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain N6_Mtase PF02384.11 gi|21226531|ref|NP_632453.1| - 9.3e-122 405.9 0.1 1.3e-121 405.4 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21226531|ref|NP_632453.1| - 4.7e-28 98.3 3.9 4.7e-28 98.3 2.7 2.0 2 0 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21226531|ref|NP_632453.1| - 1e-06 28.7 0.0 2.6e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21226531|ref|NP_632453.1| - 0.0011 18.5 0.0 0.0026 17.3 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methylase_S PF01420.14 gi|21226532|ref|NP_632454.1| - 2.2e-24 86.3 7.9 2.6e-11 43.7 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF3387 PF11867.3 gi|21226533|ref|NP_632455.1| - 4e-138 459.9 8.9 5.8e-138 459.4 6.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) HSDR_N PF04313.9 gi|21226533|ref|NP_632455.1| - 4e-46 157.2 0.3 4e-46 157.2 0.2 3.0 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|21226533|ref|NP_632455.1| - 2.7e-17 63.2 0.5 7.8e-17 61.6 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Nefa_Nip30_N PF10187.4 gi|21226533|ref|NP_632455.1| - 0.0064 16.6 2.5 4.7 7.4 1.9 3.0 2 0 0 2 2 2 2 N-terminal domain of NEFA-interacting nuclear protein NIP30 Thr_synth_N PF14821.1 gi|21226533|ref|NP_632455.1| - 0.0067 16.4 0.0 0.46 10.5 0.0 2.8 2 0 0 2 2 2 1 Threonine synthase N terminus Helicase_C PF00271.26 gi|21226533|ref|NP_632455.1| - 0.012 15.4 0.0 0.044 13.6 0.0 2.0 2 0 0 2 2 2 0 Helicase conserved C-terminal domain TetR_N PF00440.18 gi|21226534|ref|NP_632456.1| - 6.1e-10 38.5 0.0 7e-09 35.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Sigma70_r4_2 PF08281.7 gi|21226534|ref|NP_632456.1| - 0.0015 17.9 0.0 0.0045 16.4 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 Terminase_5 PF06056.7 gi|21226534|ref|NP_632456.1| - 0.0056 16.2 0.0 0.0098 15.4 0.0 1.5 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) GerE PF00196.14 gi|21226534|ref|NP_632456.1| - 0.11 11.8 0.0 0.25 10.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF1638 PF07796.6 gi|21226535|ref|NP_632457.1| - 1.4e-40 138.6 0.0 1.8e-40 138.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Imm46 PF15585.1 gi|21226535|ref|NP_632457.1| - 0.084 12.9 0.0 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Immunity protein 46 DUF1638 PF07796.6 gi|21226536|ref|NP_632458.1| - 9.7e-43 145.6 0.0 1.4e-42 145.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1699 PF08004.6 gi|21226537|ref|NP_632459.1| - 9.8e-70 232.1 1.7 1.1e-69 231.9 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.10 gi|21226537|ref|NP_632459.1| - 0.055 12.9 0.1 7.7 6.2 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region HSBP1 PF06825.7 gi|21226537|ref|NP_632459.1| - 0.077 12.5 0.2 0.18 11.3 0.1 1.6 1 0 0 1 1 1 0 Heat shock factor binding protein 1 LKAAEAR PF15478.1 gi|21226537|ref|NP_632459.1| - 0.092 13.0 0.1 0.26 11.5 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif Thioredoxin PF00085.15 gi|21226538|ref|NP_632460.1| - 4.7e-25 87.2 0.0 5e-25 87.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|21226538|ref|NP_632460.1| - 1.5e-11 44.2 0.0 7.4e-09 35.6 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|21226538|ref|NP_632460.1| - 2e-10 40.8 0.1 6.3e-10 39.2 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.1 gi|21226538|ref|NP_632460.1| - 2.3e-07 30.5 0.0 2.5e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.1 gi|21226538|ref|NP_632460.1| - 3.8e-07 29.7 0.0 4.3e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.19 gi|21226538|ref|NP_632460.1| - 7.8e-07 28.9 0.1 1.4e-06 28.2 0.1 1.4 1 1 0 1 1 1 1 Glutaredoxin Redoxin PF08534.5 gi|21226538|ref|NP_632460.1| - 1.6e-06 27.7 0.1 0.00085 18.8 0.0 2.0 1 1 1 2 2 2 2 Redoxin KaiB PF07689.7 gi|21226538|ref|NP_632460.1| - 3.5e-06 26.3 0.0 4.2e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 KaiB domain Thioredoxin_7 PF13899.1 gi|21226538|ref|NP_632460.1| - 5.7e-06 26.2 0.0 7.7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like DUF836 PF05768.9 gi|21226538|ref|NP_632460.1| - 2.9e-05 24.2 0.0 3.3e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) HyaE PF07449.6 gi|21226538|ref|NP_632460.1| - 6.4e-05 22.8 0.0 8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TraF PF13728.1 gi|21226538|ref|NP_632460.1| - 9.5e-05 21.9 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein ABC_transp_aux PF09822.4 gi|21226538|ref|NP_632460.1| - 0.00026 20.5 0.0 0.0003 20.3 0.0 1.0 1 0 0 1 1 1 1 ABC-type uncharacterized transport system Thioredoxin_4 PF13462.1 gi|21226538|ref|NP_632460.1| - 0.00059 19.8 0.1 0.082 12.9 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.1 gi|21226538|ref|NP_632460.1| - 0.001 18.8 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.15 gi|21226538|ref|NP_632460.1| - 0.0017 17.9 0.1 0.082 12.4 0.0 2.0 1 1 1 2 2 2 1 DSBA-like thioredoxin domain AhpC-TSA PF00578.16 gi|21226538|ref|NP_632460.1| - 0.0021 17.7 0.1 0.23 11.1 0.0 2.0 1 1 1 2 2 2 1 AhpC/TSA family TrbC_Ftype PF09673.5 gi|21226538|ref|NP_632460.1| - 0.048 13.2 0.0 0.051 13.1 0.0 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein Thioredoxin_5 PF13743.1 gi|21226538|ref|NP_632460.1| - 0.054 13.0 0.0 3.4 7.2 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin DUF953 PF06110.6 gi|21226538|ref|NP_632460.1| - 0.13 11.7 0.1 0.55 9.6 0.1 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) F420_ligase PF01996.11 gi|21226539|ref|NP_632461.1| - 2.2e-61 206.8 0.0 2.6e-61 206.6 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase MTHFR PF02219.12 gi|21226540|ref|NP_632462.1| - 8.9e-38 129.9 0.0 1e-37 129.8 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.3 gi|21226541|ref|NP_632463.1| - 9.5e-32 108.4 1.2 9.5e-32 108.4 0.8 1.7 2 0 0 2 2 2 1 Methylene-tetrahydrofolate reductase C terminal PrmA PF06325.8 gi|21226541|ref|NP_632463.1| - 0.14 11.2 0.1 0.2 10.7 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Pterin_bind PF00809.17 gi|21226542|ref|NP_632464.1| - 4.1e-46 157.0 0.1 6.6e-46 156.3 0.0 1.3 1 0 0 1 1 1 1 Pterin binding enzyme THF_DHG_CYH_C PF02882.14 gi|21226543|ref|NP_632465.1| - 7.1e-65 216.9 2.6 9.2e-65 216.6 1.8 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 gi|21226543|ref|NP_632465.1| - 6.7e-42 142.2 0.0 9.6e-42 141.7 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.16 gi|21226543|ref|NP_632465.1| - 0.046 13.5 1.0 2.1 8.1 0.7 2.2 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SHMT PF00464.14 gi|21226544|ref|NP_632466.1| - 4.7e-177 588.3 0.2 5.5e-177 588.0 0.1 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.16 gi|21226544|ref|NP_632466.1| - 9.9e-10 37.8 0.0 1.4e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|21226544|ref|NP_632466.1| - 2.6e-07 30.0 0.0 4.4e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.14 gi|21226544|ref|NP_632466.1| - 0.00086 18.1 0.0 0.002 16.9 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|21226544|ref|NP_632466.1| - 0.01 14.8 0.1 0.017 14.1 0.1 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.15 gi|21226544|ref|NP_632466.1| - 0.048 12.1 0.0 0.1 11.1 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.15 gi|21226544|ref|NP_632466.1| - 0.077 11.2 0.0 0.11 10.7 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Formyl_trans_N PF00551.14 gi|21226545|ref|NP_632467.1| - 1.3e-57 194.2 0.0 1.5e-57 194.1 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase HTH_3 PF01381.17 gi|21226546|ref|NP_632468.1| - 1.8e-08 34.0 0.1 5.7e-08 32.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|21226546|ref|NP_632468.1| - 1.6e-07 31.2 0.0 6.8e-07 29.2 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|21226546|ref|NP_632468.1| - 0.00015 21.8 0.0 0.00031 20.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|21226546|ref|NP_632468.1| - 0.0031 17.1 0.2 0.013 15.1 0.1 2.1 2 0 0 2 2 2 1 HTH domain MerR PF00376.18 gi|21226546|ref|NP_632468.1| - 0.0043 16.5 0.1 0.013 15.0 0.0 1.9 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.1 gi|21226546|ref|NP_632468.1| - 0.0048 16.6 0.0 0.012 15.3 0.0 1.7 1 0 0 1 1 1 1 MerR HTH family regulatory protein DUF1743 PF08489.6 gi|21226547|ref|NP_632469.1| - 3.1e-43 146.2 0.0 6.1e-43 145.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.20 gi|21226547|ref|NP_632469.1| - 0.00036 20.3 0.0 0.00083 19.1 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain OrfB_Zn_ribbon PF07282.6 gi|21226547|ref|NP_632469.1| - 0.0056 16.3 2.8 0.015 14.8 2.0 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.2 gi|21226547|ref|NP_632469.1| - 0.01 15.6 2.2 0.017 14.8 0.8 1.9 2 0 0 2 2 2 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|21226547|ref|NP_632469.1| - 0.043 13.6 4.6 0.14 12.0 3.2 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|21226547|ref|NP_632469.1| - 0.06 13.3 1.5 7.4 6.6 0.1 2.7 2 0 0 2 2 2 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.11 gi|21226547|ref|NP_632469.1| - 0.064 12.9 1.2 0.21 11.3 0.8 1.8 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit C1_1 PF00130.17 gi|21226547|ref|NP_632469.1| - 0.14 11.8 1.6 0.28 10.9 1.1 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Fimbrial_PilY2 PF14481.1 gi|21226547|ref|NP_632469.1| - 0.17 11.3 0.0 0.38 10.1 0.0 1.6 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 zinc_ribbon_2 PF13240.1 gi|21226547|ref|NP_632469.1| - 0.2 11.1 6.6 1.3 8.5 4.6 2.3 1 1 1 2 2 2 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|21226547|ref|NP_632469.1| - 0.3 10.5 2.9 1 8.8 2.0 1.9 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|21226547|ref|NP_632469.1| - 0.31 10.2 3.2 4.7 6.5 0.1 3.1 3 0 0 3 3 3 0 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|21226547|ref|NP_632469.1| - 3.2 7.6 5.6 0.39 10.5 0.4 1.9 2 0 0 2 2 2 0 zinc-ribbons NAD_synthase PF02540.12 gi|21226548|ref|NP_632470.1| - 3.6e-87 291.2 0.0 4.2e-87 291.0 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|21226548|ref|NP_632470.1| - 2.4e-05 23.0 0.0 5.1e-05 22.0 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|21226548|ref|NP_632470.1| - 0.0033 16.9 0.0 0.0046 16.4 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|21226548|ref|NP_632470.1| - 0.044 13.0 0.0 0.14 11.4 0.0 1.7 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC AAA PF00004.24 gi|21226549|ref|NP_632471.1| - 1.7e-97 322.6 0.0 1.8e-47 160.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|21226549|ref|NP_632471.1| - 1.5e-29 101.7 0.4 6.3e-29 99.7 0.1 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.7 gi|21226549|ref|NP_632471.1| - 1.9e-15 56.5 0.0 5.6e-08 32.1 0.0 3.0 2 2 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus CDC48_2 PF02933.12 gi|21226549|ref|NP_632471.1| - 8.1e-15 54.2 0.2 1.1e-13 50.5 0.3 2.6 3 0 0 3 3 2 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.9 gi|21226549|ref|NP_632471.1| - 3.3e-14 52.7 0.2 1.2e-05 25.0 0.0 3.5 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|21226549|ref|NP_632471.1| - 6.5e-14 52.1 0.6 0.00069 19.7 0.0 4.1 2 2 1 3 3 3 3 AAA domain AAA_2 PF07724.9 gi|21226549|ref|NP_632471.1| - 4.6e-13 49.4 0.1 5.7e-05 23.0 0.0 3.1 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_17 PF13207.1 gi|21226549|ref|NP_632471.1| - 4.8e-12 46.7 0.1 0.00019 22.2 0.0 3.5 3 1 0 3 3 2 2 AAA domain AAA_14 PF13173.1 gi|21226549|ref|NP_632471.1| - 8.3e-12 45.1 0.0 6.3e-05 22.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|21226549|ref|NP_632471.1| - 2.6e-11 43.8 0.0 0.00038 20.4 0.0 3.1 2 2 0 2 2 2 2 AAA ATPase domain TIP49 PF06068.8 gi|21226549|ref|NP_632471.1| - 4e-11 42.2 0.7 3.4e-06 26.0 0.0 2.9 2 1 0 2 2 2 2 TIP49 C-terminus IstB_IS21 PF01695.12 gi|21226549|ref|NP_632471.1| - 1.7e-09 37.3 0.0 0.00082 18.8 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.1 gi|21226549|ref|NP_632471.1| - 9.6e-09 35.2 0.0 0.0041 16.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|21226549|ref|NP_632471.1| - 1e-08 35.5 0.1 0.0046 17.2 0.0 3.0 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|21226549|ref|NP_632471.1| - 1.4e-08 34.3 1.1 0.0035 17.0 0.0 2.7 2 0 0 2 2 2 2 Part of AAA domain AAA_25 PF13481.1 gi|21226549|ref|NP_632471.1| - 1.1e-07 31.5 4.7 0.08 12.3 0.1 4.4 2 2 0 4 4 4 3 AAA domain Zeta_toxin PF06414.7 gi|21226549|ref|NP_632471.1| - 1.9e-07 30.4 0.0 0.0047 16.0 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin Sigma54_activat PF00158.21 gi|21226549|ref|NP_632471.1| - 4.3e-07 29.5 0.2 0.018 14.5 0.0 3.7 3 1 0 3 3 3 2 Sigma-54 interaction domain AAA_28 PF13521.1 gi|21226549|ref|NP_632471.1| - 1.1e-06 28.6 0.0 0.045 13.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|21226549|ref|NP_632471.1| - 1.1e-06 27.9 0.3 0.03 13.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|21226549|ref|NP_632471.1| - 1.9e-06 27.9 0.0 0.077 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Arch_ATPase PF01637.13 gi|21226549|ref|NP_632471.1| - 2.4e-06 27.4 0.1 0.036 13.7 0.0 3.4 2 1 0 2 2 2 2 Archaeal ATPase Parvo_NS1 PF01057.12 gi|21226549|ref|NP_632471.1| - 1.1e-05 24.4 0.1 0.096 11.5 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.1 gi|21226549|ref|NP_632471.1| - 1.7e-05 24.8 0.0 0.19 11.7 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain PhoH PF02562.11 gi|21226549|ref|NP_632471.1| - 1.8e-05 24.0 0.6 0.24 10.6 0.0 3.0 3 0 0 3 3 2 2 PhoH-like protein KaiC PF06745.8 gi|21226549|ref|NP_632471.1| - 1.9e-05 23.8 3.5 0.029 13.4 0.0 4.0 2 2 1 4 4 4 1 KaiC NB-ARC PF00931.17 gi|21226549|ref|NP_632471.1| - 2.5e-05 23.2 0.0 0.12 11.2 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain ABC_tran PF00005.22 gi|21226549|ref|NP_632471.1| - 3.6e-05 24.0 0.1 0.31 11.3 0.0 3.0 3 0 0 3 3 2 2 ABC transporter AAA_24 PF13479.1 gi|21226549|ref|NP_632471.1| - 6.5e-05 22.6 1.0 0.36 10.3 0.1 2.6 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.6 gi|21226549|ref|NP_632471.1| - 6.8e-05 22.4 0.0 0.6 9.7 0.0 3.0 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.4 gi|21226549|ref|NP_632471.1| - 7.2e-05 21.9 0.0 0.17 10.8 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.8 gi|21226549|ref|NP_632471.1| - 0.00019 20.4 0.0 0.16 10.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ATP-synt_ab PF00006.20 gi|21226549|ref|NP_632471.1| - 0.00026 20.5 0.0 0.094 12.2 0.0 2.6 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain NTPase_1 PF03266.10 gi|21226549|ref|NP_632471.1| - 0.00057 19.6 1.3 3.3 7.4 0.0 3.7 2 1 1 3 3 3 0 NTPase Cytidylate_kin2 PF13189.1 gi|21226549|ref|NP_632471.1| - 0.00079 19.3 0.0 0.54 10.1 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_11 PF13086.1 gi|21226549|ref|NP_632471.1| - 0.0011 18.5 0.0 0.74 9.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain NACHT PF05729.7 gi|21226549|ref|NP_632471.1| - 0.0012 18.5 1.4 4.4 6.9 0.0 4.0 5 0 0 5 5 4 0 NACHT domain T2SE PF00437.15 gi|21226549|ref|NP_632471.1| - 0.0019 17.1 0.0 0.16 10.8 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.1 gi|21226549|ref|NP_632471.1| - 0.0026 17.3 1.1 2.5 7.6 0.0 3.0 3 0 0 3 3 3 1 AAA domain ResIII PF04851.10 gi|21226549|ref|NP_632471.1| - 0.003 17.4 0.1 0.91 9.3 0.0 2.9 2 1 1 3 3 2 1 Type III restriction enzyme, res subunit Bac_DnaA PF00308.13 gi|21226549|ref|NP_632471.1| - 0.0033 17.0 0.0 2.1 7.9 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein SKI PF01202.17 gi|21226549|ref|NP_632471.1| - 0.0036 17.1 0.1 2 8.2 0.0 2.9 3 0 0 3 3 2 1 Shikimate kinase IPT PF01745.11 gi|21226549|ref|NP_632471.1| - 0.0039 16.4 0.1 1.1 8.3 0.0 2.7 2 0 0 2 2 2 1 Isopentenyl transferase Guanylate_kin PF00625.16 gi|21226549|ref|NP_632471.1| - 0.0056 16.1 0.1 5.6 6.3 0.0 4.0 2 2 2 4 4 4 0 Guanylate kinase UPF0079 PF02367.12 gi|21226549|ref|NP_632471.1| - 0.0072 15.9 0.2 5.4 6.6 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised P-loop hydrolase UPF0079 Viral_helicase1 PF01443.13 gi|21226549|ref|NP_632471.1| - 0.018 14.5 0.0 0.14 11.7 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Vps4_C PF09336.5 gi|21226549|ref|NP_632471.1| - 0.022 14.6 0.1 0.32 10.9 0.0 2.5 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain AAA_23 PF13476.1 gi|21226549|ref|NP_632471.1| - 0.024 14.9 0.8 11 6.2 0.0 3.1 3 0 0 3 3 3 0 AAA domain KAP_NTPase PF07693.9 gi|21226549|ref|NP_632471.1| - 0.048 12.6 0.1 3.4 6.5 0.0 3.1 3 1 1 4 4 4 0 KAP family P-loop domain KTI12 PF08433.5 gi|21226549|ref|NP_632471.1| - 0.059 12.5 0.0 10 5.1 0.0 2.5 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_21 PF13304.1 gi|21226549|ref|NP_632471.1| - 0.45 10.4 1.1 40 4.0 0.3 3.1 2 1 1 3 3 3 0 AAA domain PRC PF05239.11 gi|21226550|ref|NP_632472.1| - 1.1e-16 60.4 0.1 1.2e-16 60.3 0.1 1.0 1 0 0 1 1 1 1 PRC-barrel domain Methyltransf_11 PF08241.7 gi|21226551|ref|NP_632473.1| - 7.2e-12 45.6 0.0 1.2e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21226551|ref|NP_632473.1| - 2.5e-11 43.1 0.0 3.4e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.2 gi|21226551|ref|NP_632473.1| - 9.7e-10 39.0 0.0 3.5e-09 37.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226551|ref|NP_632473.1| - 2.4e-09 36.9 0.0 4.7e-09 36.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226551|ref|NP_632473.1| - 2.8e-08 33.6 0.0 3.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226551|ref|NP_632473.1| - 1.9e-05 24.9 0.0 3.2e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21226551|ref|NP_632473.1| - 2e-05 24.6 0.0 3.4e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|21226551|ref|NP_632473.1| - 2.1e-05 23.7 0.0 3.1e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.7 gi|21226551|ref|NP_632473.1| - 6.3e-05 23.3 0.0 0.00011 22.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21226551|ref|NP_632473.1| - 8.1e-05 22.0 0.0 0.00012 21.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.14 gi|21226551|ref|NP_632473.1| - 0.00054 19.5 0.0 0.00097 18.7 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.1 gi|21226551|ref|NP_632473.1| - 0.0012 18.5 0.0 0.0023 17.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|21226551|ref|NP_632473.1| - 0.0032 16.6 0.0 0.0073 15.4 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|21226551|ref|NP_632473.1| - 0.0032 16.5 0.0 0.0048 15.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|21226551|ref|NP_632473.1| - 0.0045 17.7 0.0 0.012 16.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226551|ref|NP_632473.1| - 0.018 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.4 gi|21226551|ref|NP_632473.1| - 0.039 13.4 0.1 0.068 12.6 0.0 1.5 1 1 0 1 1 1 0 Putative methyltransferase TPMT PF05724.6 gi|21226551|ref|NP_632473.1| - 0.054 12.9 0.0 0.068 12.5 0.0 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MetW PF07021.7 gi|21226551|ref|NP_632473.1| - 0.082 12.2 0.2 0.14 11.5 0.0 1.5 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW GrpB PF04229.9 gi|21226552|ref|NP_632474.1| - 2.2e-51 173.8 0.0 2.5e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 GrpB protein Kinesin-related PF06548.6 gi|21226552|ref|NP_632474.1| - 0.14 10.6 0.0 0.18 10.3 0.0 1.1 1 0 0 1 1 1 0 Kinesin-related Cupin_2 PF07883.6 gi|21226553|ref|NP_632475.1| - 1.5e-06 27.5 0.0 2.8e-06 26.7 0.0 1.5 1 1 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|21226553|ref|NP_632475.1| - 2.2e-05 24.1 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|21226553|ref|NP_632475.1| - 0.017 14.7 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|21226553|ref|NP_632475.1| - 0.097 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like Crisp PF08562.5 gi|21226554|ref|NP_632476.1| - 0.12 12.6 3.9 0.12 12.6 1.6 1.8 2 1 0 2 2 2 0 Crisp DUF2795 PF11387.3 gi|21226555|ref|NP_632477.1| - 1.2e-17 63.4 0.1 1.6e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) MerC PF03203.9 gi|21226556|ref|NP_632478.1| - 0.012 15.9 1.6 0.012 15.9 1.1 2.3 2 1 0 2 2 2 0 MerC mercury resistance protein DUF2189 PF09955.4 gi|21226556|ref|NP_632478.1| - 0.016 15.1 0.0 0.016 15.1 0.0 3.0 3 1 0 3 3 3 0 Predicted integral membrane protein (DUF2189) DUF3593 PF12159.3 gi|21226556|ref|NP_632478.1| - 0.016 14.9 3.7 0.019 14.7 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3593) 7TMR-DISM_7TM PF07695.6 gi|21226556|ref|NP_632478.1| - 0.048 13.3 14.9 0.48 10.0 3.7 2.1 2 0 0 2 2 2 0 7TM diverse intracellular signalling E1-E2_ATPase PF00122.15 gi|21226556|ref|NP_632478.1| - 0.055 12.5 4.0 0.27 10.2 0.1 2.1 2 0 0 2 2 2 0 E1-E2 ATPase DUF202 PF02656.10 gi|21226556|ref|NP_632478.1| - 2.4 8.4 11.3 6.6 7.0 1.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Transglut_core PF01841.14 gi|21226557|ref|NP_632479.1| - 2.4e-13 50.2 0.0 3.4e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily Hydrolase_3 PF08282.7 gi|21226558|ref|NP_632480.1| - 6.4e-30 104.5 2.3 1.8e-21 76.8 0.2 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|21226558|ref|NP_632480.1| - 2.4e-08 33.5 0.0 1.2e-06 27.9 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.2 gi|21226558|ref|NP_632480.1| - 1.4e-06 28.6 0.2 0.00035 20.7 0.0 2.6 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21226558|ref|NP_632480.1| - 6.6e-05 23.4 5.3 0.059 13.7 1.4 2.9 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.11 gi|21226558|ref|NP_632480.1| - 0.00085 18.2 0.0 0.0015 17.5 0.0 1.4 1 0 0 1 1 1 1 Trehalose-phosphatase Rad51 PF08423.6 gi|21226559|ref|NP_632481.1| - 9.5e-90 299.9 0.1 1.2e-89 299.6 0.1 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.1 gi|21226559|ref|NP_632481.1| - 1e-14 54.4 0.7 2.7e-14 53.0 0.5 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_25 PF13481.1 gi|21226559|ref|NP_632481.1| - 6.6e-10 38.7 0.0 1e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|21226559|ref|NP_632481.1| - 3.4e-08 32.9 0.1 1e-06 28.0 0.1 2.1 1 1 0 1 1 1 1 recA bacterial DNA recombination protein KaiC PF06745.8 gi|21226559|ref|NP_632481.1| - 5.3e-07 28.9 0.1 8.7e-07 28.2 0.1 1.3 1 0 0 1 1 1 1 KaiC HHH PF00633.18 gi|21226559|ref|NP_632481.1| - 5.8e-07 28.8 2.9 0.0011 18.5 0.1 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.2 gi|21226559|ref|NP_632481.1| - 3.5e-06 26.8 0.2 7.7e-06 25.7 0.2 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.3 gi|21226559|ref|NP_632481.1| - 0.00015 21.6 0.0 0.00037 20.3 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.3 gi|21226559|ref|NP_632481.1| - 0.00046 20.0 0.0 0.0025 17.7 0.0 2.3 2 0 0 2 2 2 1 IMS family HHH motif AAA_22 PF13401.1 gi|21226559|ref|NP_632481.1| - 0.0016 18.5 0.0 0.0033 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain DNA_pol_lambd_f PF10391.4 gi|21226559|ref|NP_632481.1| - 0.0025 17.3 0.0 0.0078 15.7 0.0 1.9 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH_8 PF14716.1 gi|21226559|ref|NP_632481.1| - 0.0031 17.6 0.1 0.25 11.5 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain BAF PF02961.9 gi|21226559|ref|NP_632481.1| - 0.016 15.5 0.0 0.21 11.8 0.0 2.3 2 0 0 2 2 2 0 Barrier to autointegration factor HHH_3 PF12836.2 gi|21226559|ref|NP_632481.1| - 0.02 14.8 0.1 3.4 7.6 0.0 2.6 2 0 0 2 2 2 0 Helix-hairpin-helix motif ATP-synt_ab PF00006.20 gi|21226559|ref|NP_632481.1| - 0.036 13.5 0.0 0.075 12.5 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF4332 PF14229.1 gi|21226559|ref|NP_632481.1| - 0.036 14.0 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) AAA_24 PF13479.1 gi|21226559|ref|NP_632481.1| - 0.044 13.3 0.0 0.081 12.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|21226559|ref|NP_632481.1| - 0.057 13.0 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 NACHT domain TrwB_AAD_bind PF10412.4 gi|21226559|ref|NP_632481.1| - 0.082 11.5 0.1 0.14 10.7 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain UPF0079 PF02367.12 gi|21226559|ref|NP_632481.1| - 0.11 12.1 0.1 0.28 10.8 0.1 1.7 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 DUF2075 PF09848.4 gi|21226559|ref|NP_632481.1| - 0.11 11.3 0.1 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) CTP_transf_2 PF01467.21 gi|21226560|ref|NP_632482.1| - 7.2e-13 48.8 0.0 1.4e-12 47.9 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase Nefa_Nip30_N PF10187.4 gi|21226561|ref|NP_632483.1| - 1.1 9.4 3.5 4.4 7.5 0.9 2.1 1 1 1 2 2 2 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 AP_endonuc_2 PF01261.19 gi|21226562|ref|NP_632484.1| - 1.3e-20 73.6 0.1 1.6e-20 73.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Meth_synt_2 PF01717.13 gi|21226563|ref|NP_632485.1| - 3.3e-06 26.3 0.1 0.011 14.7 0.0 2.1 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain AAA PF00004.24 gi|21226563|ref|NP_632485.1| - 0.18 12.0 0.2 0.18 12.0 0.1 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.22 gi|21226564|ref|NP_632486.1| - 2.2e-32 112.2 0.0 3.5e-32 111.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226564|ref|NP_632486.1| - 3.1e-15 56.9 0.6 4.6e-09 36.6 0.0 2.3 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21226564|ref|NP_632486.1| - 2.5e-07 30.1 0.0 4.8e-07 29.2 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21226564|ref|NP_632486.1| - 1.4e-05 24.3 0.1 0.00077 18.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|21226564|ref|NP_632486.1| - 0.00015 21.1 0.1 0.00032 20.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|21226564|ref|NP_632486.1| - 0.0008 18.0 0.7 0.48 8.8 0.1 2.1 2 0 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|21226564|ref|NP_632486.1| - 0.0032 16.6 0.0 0.007 15.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|21226564|ref|NP_632486.1| - 0.0086 16.4 0.2 0.018 15.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|21226564|ref|NP_632486.1| - 0.096 12.6 0.1 0.4 10.6 0.1 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Pr_beta_C PF12465.3 gi|21226564|ref|NP_632486.1| - 0.12 11.6 0.0 0.25 10.6 0.0 1.5 1 0 0 1 1 1 0 Proteasome beta subunits C terminal CbiQ PF02361.11 gi|21226565|ref|NP_632487.1| - 2.6e-34 118.7 12.1 2.6e-34 118.7 8.4 1.4 2 0 0 2 2 2 1 Cobalt transport protein CbiN PF02553.10 gi|21226566|ref|NP_632488.1| - 3e-27 94.4 0.2 3.9e-27 94.0 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN DUF3989 PF13150.1 gi|21226566|ref|NP_632488.1| - 0.048 13.1 0.1 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) CbiM PF01891.11 gi|21226567|ref|NP_632489.1| - 9.7e-56 188.6 21.3 1.1e-55 188.4 14.8 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region ATP-synt_J PF04911.7 gi|21226567|ref|NP_632489.1| - 0.89 9.0 2.7 2 7.9 0.0 2.9 3 0 0 3 3 3 0 ATP synthase j chain YqzM PF14141.1 gi|21226567|ref|NP_632489.1| - 1 9.2 6.2 0.26 11.1 0.9 2.4 2 0 0 2 2 2 0 YqzM-like protein SNARE_assoc PF09335.6 gi|21226568|ref|NP_632490.1| - 2e-20 73.2 4.7 2e-20 73.2 3.3 1.5 1 1 1 2 2 2 1 SNARE associated Golgi protein DUF4112 PF13430.1 gi|21226568|ref|NP_632490.1| - 0.1 12.5 0.1 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) S-layer PF07752.6 gi|21226569|ref|NP_632491.1| - 3.4e-187 619.6 28.3 1.1e-94 316.5 6.8 2.8 3 0 0 3 3 3 2 S-layer protein CARDB PF07705.6 gi|21226569|ref|NP_632491.1| - 3.4e-10 39.8 1.8 1.1e-09 38.2 0.5 2.5 2 0 0 2 2 2 1 CARDB DUF4480 PF13715.1 gi|21226569|ref|NP_632491.1| - 1.6e-08 34.4 2.3 6.1e-06 26.1 0.2 4.1 3 1 0 4 4 4 1 Domain of unknown function (DUF4480) CarboxypepD_reg PF13620.1 gi|21226569|ref|NP_632491.1| - 5.7e-08 32.7 10.6 6.4e-06 26.1 0.4 4.7 5 0 0 5 5 5 2 Carboxypeptidase regulatory-like domain tRNA-synt_1c_C PF03950.13 gi|21226569|ref|NP_632491.1| - 0.005 16.5 0.1 1.4 8.5 0.0 3.6 4 0 0 4 4 4 1 tRNA synthetases class I (E and Q), anti-codon binding domain DUF499 PF04465.7 gi|21226569|ref|NP_632491.1| - 0.014 13.0 0.8 0.02 12.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF499) Cupredoxin_1 PF13473.1 gi|21226569|ref|NP_632491.1| - 0.015 15.1 1.7 0.21 11.4 0.2 3.4 4 1 1 5 5 5 0 Cupredoxin-like domain DUF824 PF05688.6 gi|21226569|ref|NP_632491.1| - 0.021 14.4 2.0 18 5.0 0.1 3.9 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) A2M PF00207.17 gi|21226569|ref|NP_632491.1| - 0.033 13.7 0.1 1.5 8.4 0.0 3.3 3 0 0 3 3 3 0 Alpha-2-macroglobulin family YtkA PF13115.1 gi|21226569|ref|NP_632491.1| - 0.095 13.0 6.5 4 7.8 0.0 3.9 4 1 0 4 4 3 0 YtkA-like DUF3380 PF11860.3 gi|21226569|ref|NP_632491.1| - 0.17 11.9 0.5 14 5.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3380) TonB_2 PF13103.1 gi|21226569|ref|NP_632491.1| - 0.2 11.7 2.2 3.4 7.7 0.1 3.6 4 0 0 4 4 4 0 TonB C terminal DUF4198 PF10670.4 gi|21226569|ref|NP_632491.1| - 0.48 10.3 6.3 5.9 6.8 0.2 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4198) DUF165 PF02592.10 gi|21226570|ref|NP_632492.1| - 4e-44 150.3 5.4 4e-44 150.3 3.7 2.0 2 0 0 2 2 2 1 Uncharacterized ACR, YhhQ family COG1738 BioY PF02632.9 gi|21226570|ref|NP_632492.1| - 0.026 14.1 6.0 0.055 13.1 4.2 1.6 1 0 0 1 1 1 0 BioY family Prion_bPrPp PF11587.3 gi|21226570|ref|NP_632492.1| - 0.036 13.7 0.4 5 6.8 0.0 2.6 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal DUF3382 PF11862.3 gi|21226570|ref|NP_632492.1| - 0.061 13.2 1.3 0.09 12.6 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) Phytoreo_Pns PF05451.6 gi|21226570|ref|NP_632492.1| - 0.088 11.4 1.1 0.13 10.8 0.8 1.2 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 tRNA_NucTransf2 PF09249.6 gi|21226571|ref|NP_632493.1| - 3.2e-45 152.6 0.0 6.3e-45 151.7 0.0 1.5 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|21226571|ref|NP_632493.1| - 2.6e-10 40.4 0.2 2.4e-09 37.4 0.0 2.8 3 1 0 3 3 3 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21226571|ref|NP_632493.1| - 0.029 14.4 0.0 0.066 13.2 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm OAS1_C PF10421.4 gi|21226571|ref|NP_632493.1| - 0.034 13.6 0.0 0.16 11.4 0.0 1.9 1 1 1 2 2 2 0 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus ETRAMP PF09716.5 gi|21226572|ref|NP_632494.1| - 0.17 11.8 1.8 0.63 10.0 1.3 2.0 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) OGG_N PF07934.7 gi|21226573|ref|NP_632495.1| - 4.4e-28 97.5 0.4 9.1e-28 96.5 0.1 1.6 2 0 0 2 2 2 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.20 gi|21226573|ref|NP_632495.1| - 8.7e-08 32.4 0.0 2.8e-07 30.7 0.0 1.7 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|21226573|ref|NP_632495.1| - 0.0066 16.0 0.0 0.015 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif ADP_PFK_GK PF04587.10 gi|21226574|ref|NP_632496.1| - 5.6e-60 202.8 0.0 3e-25 88.3 0.0 3.0 3 0 0 3 3 3 3 ADP-specific Phosphofructokinase/Glucokinase conserved region ADP_PFK_GK PF04587.10 gi|21226575|ref|NP_632497.1| - 1.2e-112 376.4 0.0 1.5e-112 376.1 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region ArgJ PF01960.13 gi|21226576|ref|NP_632498.1| - 1.8e-139 464.5 2.4 2.1e-139 464.2 1.7 1.0 1 0 0 1 1 1 1 ArgJ family Bcl-2 PF00452.14 gi|21226576|ref|NP_632498.1| - 0.16 12.1 0.0 0.3 11.2 0.0 1.6 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family CBS PF00571.23 gi|21226577|ref|NP_632499.1| - 1.3e-36 124.1 1.8 1.2e-18 66.5 0.1 2.1 2 0 0 2 2 2 2 CBS domain Semialdhyde_dh PF01118.19 gi|21226578|ref|NP_632500.1| - 7.4e-32 110.2 0.0 1.2e-31 109.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|21226578|ref|NP_632500.1| - 1.4e-24 86.9 0.0 1.8e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|21226578|ref|NP_632500.1| - 0.0043 17.5 0.0 0.017 15.6 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold DUF1628 PF07790.6 gi|21226579|ref|NP_632501.1| - 1.2e-08 35.5 0.1 2e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) Nuc_deoxyrib_tr PF05014.10 gi|21226580|ref|NP_632502.1| - 3.2e-34 117.2 0.1 3.7e-34 116.9 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase TIR_2 PF13676.1 gi|21226580|ref|NP_632502.1| - 0.003 17.6 0.0 0.0083 16.2 0.0 1.7 1 1 0 1 1 1 1 TIR domain DUF4406 PF14359.1 gi|21226580|ref|NP_632502.1| - 0.0033 17.4 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4406) DUF2872 PF11071.3 gi|21226580|ref|NP_632502.1| - 0.022 14.6 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2872) Mn_catalase PF05067.7 gi|21226580|ref|NP_632502.1| - 0.083 11.6 0.0 0.098 11.3 0.0 1.2 1 0 0 1 1 1 0 Manganese containing catalase Transferrin PF00405.12 gi|21226580|ref|NP_632502.1| - 0.086 11.7 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Transferrin Acetyltransf_7 PF13508.1 gi|21226583|ref|NP_632505.1| - 1.2e-10 41.3 0.1 1.9e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21226583|ref|NP_632505.1| - 4.3e-10 39.7 0.0 5.4e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21226583|ref|NP_632505.1| - 6.5e-10 38.9 0.3 3.4e-09 36.6 0.2 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|21226583|ref|NP_632505.1| - 0.00018 21.6 0.0 0.00027 21.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21226583|ref|NP_632505.1| - 0.0024 17.7 0.0 0.04 13.7 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21226583|ref|NP_632505.1| - 0.0072 16.0 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein TPR_11 PF13414.1 gi|21226584|ref|NP_632506.1| - 0.013 15.1 0.6 0.047 13.3 0.4 1.9 1 0 0 1 1 1 0 TPR repeat Spore_coat_CotO PF14153.1 gi|21226584|ref|NP_632506.1| - 1.8 7.9 9.9 4.4 6.6 6.9 1.7 1 1 0 1 1 1 0 Spore coat protein CotO HSP20 PF00011.16 gi|21226585|ref|NP_632507.1| - 6.5e-22 77.3 0.9 8.3e-22 76.9 0.6 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21226585|ref|NP_632507.1| - 0.0012 19.3 0.1 0.019 15.5 0.0 2.1 1 1 0 1 1 1 1 CS domain PIH1 PF08190.7 gi|21226585|ref|NP_632507.1| - 0.028 13.8 0.1 0.03 13.7 0.1 1.1 1 0 0 1 1 1 0 pre-RNA processing PIH1/Nop17 Dynamin_N PF00350.18 gi|21226585|ref|NP_632507.1| - 0.096 12.5 0.2 0.28 10.9 0.1 1.6 1 1 1 2 2 2 0 Dynamin family AMMECR1 PF01871.12 gi|21226586|ref|NP_632508.1| - 5e-57 191.7 0.0 6e-57 191.4 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PGK PF00162.14 gi|21226587|ref|NP_632509.1| - 5.6e-121 403.7 1.6 6.4e-121 403.5 1.1 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase UDG PF03167.14 gi|21226588|ref|NP_632510.1| - 2.7e-37 127.5 0.0 3.1e-37 127.4 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily HSP20 PF00011.16 gi|21226589|ref|NP_632511.1| - 7.2e-06 25.7 0.9 5.4e-05 22.9 0.6 1.9 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21226589|ref|NP_632511.1| - 0.002 18.6 0.2 0.0076 16.7 0.0 1.8 1 1 1 2 2 2 1 CS domain Fer4 PF00037.22 gi|21226590|ref|NP_632512.1| - 7e-12 44.4 14.7 4.2e-07 29.3 4.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226590|ref|NP_632512.1| - 5.7e-11 41.7 13.4 2.1e-05 24.1 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226590|ref|NP_632512.1| - 7.6e-10 38.4 8.7 1e-09 37.9 6.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226590|ref|NP_632512.1| - 1.9e-09 36.8 10.8 0.00016 21.4 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21226590|ref|NP_632512.1| - 2.8e-09 37.1 10.0 3.3e-09 36.8 6.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226590|ref|NP_632512.1| - 3.6e-09 36.8 10.3 5e-09 36.3 7.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226590|ref|NP_632512.1| - 4.8e-08 32.7 7.7 6.4e-08 32.3 5.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226590|ref|NP_632512.1| - 4e-06 26.7 8.8 8.6e-06 25.6 6.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226590|ref|NP_632512.1| - 4.8e-06 27.2 7.5 0.00066 20.3 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21226590|ref|NP_632512.1| - 7.5e-06 25.8 8.6 0.0005 20.1 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21226590|ref|NP_632512.1| - 2.2e-05 24.9 10.8 0.0016 18.9 7.4 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21226590|ref|NP_632512.1| - 0.00022 21.4 11.5 0.0094 16.2 2.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226590|ref|NP_632512.1| - 0.0004 20.7 10.8 0.017 15.5 3.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21226590|ref|NP_632512.1| - 0.00077 19.8 14.2 0.0083 16.6 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21226590|ref|NP_632512.1| - 0.0018 18.1 4.7 0.0068 16.2 3.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226590|ref|NP_632512.1| - 0.0023 18.2 13.5 0.03 14.7 9.4 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_19 PF06902.6 gi|21226590|ref|NP_632512.1| - 1.3 8.8 5.4 2.7 7.8 3.7 1.6 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Toxin_2 PF00451.14 gi|21226590|ref|NP_632512.1| - 2.6 8.2 9.0 1.3 9.1 0.2 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Fer4 PF00037.22 gi|21226591|ref|NP_632513.1| - 1.4e-10 40.2 10.3 1.9e-08 33.5 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21226591|ref|NP_632513.1| - 1.5e-09 38.0 10.2 1.8e-09 37.8 7.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226591|ref|NP_632513.1| - 7.7e-09 35.6 9.5 9e-09 35.4 6.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226591|ref|NP_632513.1| - 2.3e-07 30.5 8.2 2.7e-07 30.3 5.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226591|ref|NP_632513.1| - 2.8e-07 30.1 13.4 1.3e-05 24.8 4.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226591|ref|NP_632513.1| - 7.8e-07 28.7 10.1 1.3e-06 28.1 7.1 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226591|ref|NP_632513.1| - 1.2e-06 29.1 7.6 4.7e-05 24.0 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21226591|ref|NP_632513.1| - 5.6e-06 26.2 11.7 0.00059 19.9 3.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21226591|ref|NP_632513.1| - 4.3e-05 23.7 11.5 0.00035 20.9 3.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226591|ref|NP_632513.1| - 0.00029 20.7 10.3 0.00084 19.3 7.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226591|ref|NP_632513.1| - 0.00053 19.7 12.0 0.00084 19.1 3.2 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21226591|ref|NP_632513.1| - 0.0021 17.9 4.4 0.0022 17.8 3.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226591|ref|NP_632513.1| - 0.003 17.9 4.7 0.003 17.9 3.3 2.1 1 1 2 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226591|ref|NP_632513.1| - 0.0035 17.6 10.5 0.12 12.7 7.3 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226591|ref|NP_632513.1| - 0.11 12.9 12.8 0.92 9.9 8.9 2.4 1 1 0 1 1 1 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|21226591|ref|NP_632513.1| - 0.46 11.0 12.6 0.71 10.4 3.8 2.4 1 1 0 1 1 1 0 4Fe-4S single cluster domain PAR1 PF06521.6 gi|21226591|ref|NP_632513.1| - 7.7 6.0 7.7 9.2 5.8 0.4 2.1 1 1 1 2 2 2 0 PAR1 protein HEAT_2 PF13646.1 gi|21226592|ref|NP_632514.1| - 8.1e-125 407.4 35.7 3.6e-19 68.8 1.6 6.7 1 1 8 9 9 9 9 HEAT repeats HEAT_PBS PF03130.11 gi|21226592|ref|NP_632514.1| - 5e-54 175.2 17.5 8.2e-05 22.7 0.1 12.3 12 0 0 12 12 12 10 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|21226592|ref|NP_632514.1| - 1.2e-46 152.5 1.1 0.00013 21.7 0.0 11.6 12 0 0 12 12 12 7 HEAT repeat HEAT_EZ PF13513.1 gi|21226592|ref|NP_632514.1| - 8.3e-41 137.5 19.2 6.6e-06 26.4 0.0 11.3 7 4 4 11 11 11 7 HEAT-like repeat Arm PF00514.18 gi|21226592|ref|NP_632514.1| - 2.2e-22 78.0 0.5 0.00045 19.9 0.0 9.5 8 3 4 12 12 12 5 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|21226592|ref|NP_632514.1| - 1.1e-10 40.5 0.0 3.2e-05 22.4 0.0 2.8 2 1 0 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.2 gi|21226592|ref|NP_632514.1| - 5.7e-06 26.2 0.0 0.98 9.2 0.0 5.7 2 2 2 5 5 5 2 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.3 gi|21226592|ref|NP_632514.1| - 0.00025 20.4 0.0 6.2 6.1 0.0 4.1 4 1 0 4 4 4 2 CLASP N terminal Aconitase_B_N PF11791.3 gi|21226592|ref|NP_632514.1| - 0.00027 20.8 0.1 19 5.0 0.0 5.6 3 2 2 6 6 6 0 Aconitate B N-terminal domain ALF PF03752.8 gi|21226592|ref|NP_632514.1| - 0.00032 20.5 9.4 0.63 9.9 0.0 6.7 9 0 0 9 9 8 2 Short repeats of unknown function UPF0147 PF03685.8 gi|21226592|ref|NP_632514.1| - 0.0043 16.8 0.5 0.44 10.4 0.0 4.2 5 0 0 5 5 5 1 Uncharacterised protein family (UPF0147) Vitellogenin_N PF01347.17 gi|21226592|ref|NP_632514.1| - 0.096 10.8 0.0 4.5 5.3 0.0 2.9 4 0 0 4 4 4 0 Lipoprotein amino terminal region ERAP1_C PF11838.3 gi|21226592|ref|NP_632514.1| - 0.12 11.5 0.1 28 3.8 0.0 3.9 1 1 2 3 3 3 0 ERAP1-like C-terminal domain MmoB_DmpM PF02406.12 gi|21226592|ref|NP_632514.1| - 0.14 12.1 0.3 10 6.1 0.0 3.4 2 2 2 4 4 4 0 MmoB/DmpM family MarR_2 PF12802.2 gi|21226594|ref|NP_632516.1| - 0.00077 19.0 0.0 0.0016 18.0 0.0 1.6 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|21226594|ref|NP_632516.1| - 0.0031 17.1 0.1 0.0054 16.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|21226594|ref|NP_632516.1| - 0.019 14.5 0.0 0.15 11.6 0.0 2.1 2 0 0 2 2 2 0 IclR helix-turn-helix domain TrmB PF01978.14 gi|21226594|ref|NP_632516.1| - 0.029 14.0 0.1 0.068 12.8 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DAO PF01266.19 gi|21226594|ref|NP_632516.1| - 0.05 12.5 0.0 0.059 12.2 0.0 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase B-block_TFIIIC PF04182.7 gi|21226594|ref|NP_632516.1| - 0.06 13.1 0.1 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC GntR PF00392.16 gi|21226594|ref|NP_632516.1| - 0.061 12.7 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family ATP-grasp_5 PF13549.1 gi|21226595|ref|NP_632517.1| - 5.1e-82 274.3 0.3 6e-82 274.1 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|21226595|ref|NP_632517.1| - 0.00026 20.7 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.5 gi|21226595|ref|NP_632517.1| - 0.0005 19.5 0.4 0.0015 17.9 0.3 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|21226595|ref|NP_632517.1| - 0.0087 15.3 0.1 0.015 14.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.6 gi|21226595|ref|NP_632517.1| - 0.022 14.2 0.1 0.053 12.9 0.0 1.6 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Acetate_kinase PF00871.12 gi|21226597|ref|NP_632519.1| - 2.4e-175 582.6 0.9 2.8e-175 582.5 0.6 1.0 1 0 0 1 1 1 1 Acetokinase family PTA_PTB PF01515.14 gi|21226598|ref|NP_632520.1| - 2.3e-127 424.4 4.9 2.6e-127 424.2 3.4 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF3663 PF12404.3 gi|21226598|ref|NP_632520.1| - 0.017 14.9 0.2 0.058 13.1 0.0 1.9 2 0 0 2 2 2 0 Peptidase FMN_red PF03358.10 gi|21226599|ref|NP_632521.1| - 5.7e-38 129.7 0.0 7.2e-38 129.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21226599|ref|NP_632521.1| - 2.1e-13 50.2 0.0 2.8e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|21226599|ref|NP_632521.1| - 0.007 16.3 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Voltage_CLC PF00654.15 gi|21226600|ref|NP_632522.1| - 9.3e-84 281.4 40.4 2.9e-83 279.8 25.0 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.23 gi|21226600|ref|NP_632522.1| - 2.7e-24 84.6 0.5 5.4e-11 42.0 0.0 2.5 2 0 0 2 2 2 2 CBS domain CMD PF02627.15 gi|21226601|ref|NP_632523.1| - 5.7e-18 64.5 0.0 7.4e-18 64.1 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Pinin_SDK_memA PF04696.8 gi|21226601|ref|NP_632523.1| - 0.014 14.9 0.1 0.017 14.7 0.0 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region DUF4206 PF13901.1 gi|21226601|ref|NP_632523.1| - 0.05 13.1 0.8 0.056 12.9 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4206) AHSA1 PF08327.6 gi|21226602|ref|NP_632524.1| - 2.6e-25 88.8 0.0 3.3e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.4 gi|21226602|ref|NP_632524.1| - 0.0095 16.1 0.0 0.017 15.2 0.0 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport 3-dmu-9_3-mt PF06983.8 gi|21226603|ref|NP_632525.1| - 5.3e-50 168.6 0.1 6.9e-50 168.2 0.1 1.1 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Ribonuc_L-PSP PF01042.16 gi|21226604|ref|NP_632526.1| - 1.7e-18 66.5 0.1 2.2e-18 66.1 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Abi PF02517.11 gi|21226605|ref|NP_632527.1| - 1.8e-09 37.5 9.1 1.8e-09 37.5 6.3 2.4 3 1 0 3 3 3 1 CAAX protease self-immunity DUF2953 PF11167.3 gi|21226605|ref|NP_632527.1| - 1.1 9.1 4.5 0.88 9.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) DUF4260 PF14079.1 gi|21226605|ref|NP_632527.1| - 2.5 7.9 9.3 0.19 11.5 0.2 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF4260) HEAT_2 PF13646.1 gi|21226606|ref|NP_632528.1| - 8.1e-119 388.1 59.4 3.4e-18 65.7 0.2 9.5 1 1 8 10 10 10 10 HEAT repeats HEAT_PBS PF03130.11 gi|21226606|ref|NP_632528.1| - 6.5e-59 190.4 50.1 0.00091 19.4 0.1 18.1 18 0 0 18 18 18 14 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|21226606|ref|NP_632528.1| - 1.5e-54 177.2 11.4 2.4e-05 24.0 0.0 17.3 17 0 0 17 17 17 11 HEAT repeat HEAT_EZ PF13513.1 gi|21226606|ref|NP_632528.1| - 1.2e-46 156.1 36.8 9.9e-07 29.0 0.1 14.2 10 2 5 15 15 15 12 HEAT-like repeat Adaptin_N PF01602.15 gi|21226606|ref|NP_632528.1| - 7.1e-18 64.2 2.0 0.00044 18.7 0.1 6.4 1 1 3 6 6 6 4 Adaptin N terminal region Arm PF00514.18 gi|21226606|ref|NP_632528.1| - 4.4e-14 51.7 4.8 0.38 10.6 0.0 12.3 12 2 2 14 14 14 2 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.2 gi|21226606|ref|NP_632528.1| - 3.1e-12 46.6 0.0 0.37 11.2 0.0 9.0 4 2 5 10 10 10 1 Vacuolar 14 Fab1-binding region Aconitase_B_N PF11791.3 gi|21226606|ref|NP_632528.1| - 9.9e-09 35.1 6.6 2 8.1 0.1 7.2 5 3 2 7 7 7 3 Aconitate B N-terminal domain NACHT PF05729.7 gi|21226606|ref|NP_632528.1| - 9.7e-08 31.8 0.0 4.1e-07 29.7 0.0 2.1 2 0 0 2 2 2 1 NACHT domain Cnd1 PF12717.2 gi|21226606|ref|NP_632528.1| - 1.8e-05 24.6 15.1 3 7.6 0.0 8.0 4 1 5 9 9 9 2 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.3 gi|21226606|ref|NP_632528.1| - 2.5e-05 23.7 0.1 0.11 11.8 0.0 3.5 2 1 1 3 3 3 2 CLASP N terminal DUF2019 PF09450.5 gi|21226606|ref|NP_632528.1| - 0.00055 19.7 5.9 4.1 7.3 0.0 7.0 3 2 6 9 9 9 1 Domain of unknown function (DUF2019) AAA_22 PF13401.1 gi|21226606|ref|NP_632528.1| - 0.0049 17.0 0.4 0.052 13.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain T2SE PF00437.15 gi|21226606|ref|NP_632528.1| - 0.017 14.0 0.0 0.036 12.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein IstB_IS21 PF01695.12 gi|21226606|ref|NP_632528.1| - 0.035 13.5 0.0 0.077 12.4 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.13 gi|21226606|ref|NP_632528.1| - 0.066 12.6 0.0 0.18 11.2 0.0 1.7 1 0 0 1 1 1 0 FtsK/SpoIIIE family KaiC PF06745.8 gi|21226606|ref|NP_632528.1| - 0.078 12.0 0.0 0.32 10.0 0.0 2.0 2 0 0 2 2 2 0 KaiC ALF PF03752.8 gi|21226606|ref|NP_632528.1| - 0.52 10.2 20.9 32 4.4 0.0 8.6 9 1 1 10 10 8 0 Short repeats of unknown function AAA_16 PF13191.1 gi|21226606|ref|NP_632528.1| - 0.57 10.1 6.4 3.9 7.4 0.0 4.0 2 1 0 2 2 2 0 AAA ATPase domain URO-D PF01208.12 gi|21226607|ref|NP_632529.1| - 2.3e-85 286.5 0.0 2.6e-85 286.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Cupin_2 PF07883.6 gi|21226608|ref|NP_632530.1| - 2e-15 56.0 0.0 3.1e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|21226608|ref|NP_632530.1| - 8.8e-07 28.6 0.0 1.2e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.17 gi|21226608|ref|NP_632530.1| - 1.3e-06 27.8 0.0 1.6e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Cupin MannoseP_isomer PF01050.13 gi|21226608|ref|NP_632530.1| - 1.6e-05 24.5 0.0 2e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.7 gi|21226608|ref|NP_632530.1| - 0.00034 20.5 0.1 0.00044 20.1 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.7 gi|21226608|ref|NP_632530.1| - 0.00042 19.6 0.0 0.00057 19.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF861) GPI PF06560.6 gi|21226608|ref|NP_632530.1| - 0.00059 18.9 0.0 0.00086 18.3 0.0 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Auxin_BP PF02041.11 gi|21226608|ref|NP_632530.1| - 0.004 16.6 0.0 0.0084 15.5 0.0 1.5 1 1 0 1 1 1 1 Auxin binding protein DUF2335 PF10097.4 gi|21226608|ref|NP_632530.1| - 0.12 12.0 0.2 0.27 10.8 0.0 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2335) Cupin_6 PF12852.2 gi|21226608|ref|NP_632530.1| - 0.14 11.7 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Cupin DUF3348 PF11828.3 gi|21226609|ref|NP_632531.1| - 0.15 11.4 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3348) PHP_C PF13263.1 gi|21226610|ref|NP_632532.1| - 3.3e-23 80.9 0.1 1.1e-22 79.3 0.1 1.9 2 0 0 2 2 2 1 PHP-associated PHP PF02811.14 gi|21226610|ref|NP_632532.1| - 2.1e-13 50.4 0.0 9.5e-13 48.3 0.0 1.9 1 1 0 1 1 1 1 PHP domain DUF4277 PF14104.1 gi|21226611|ref|NP_632533.1| - 2.7e-41 140.3 0.0 5.8e-41 139.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21226611|ref|NP_632533.1| - 6.2e-10 38.9 0.1 6.8e-09 35.5 0.1 2.2 1 1 0 1 1 1 1 Transposase DDE domain Imm42 PF15601.1 gi|21226611|ref|NP_632533.1| - 0.055 12.9 0.3 0.13 11.7 0.2 1.6 1 0 0 1 1 1 0 Immunity protein 42 DUF4044 PF13253.1 gi|21226611|ref|NP_632533.1| - 0.069 12.3 0.3 0.15 11.2 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) MMR_HSR1 PF01926.18 gi|21226612|ref|NP_632534.1| - 8.6e-21 74.0 0.0 1.7e-20 73.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 gi|21226612|ref|NP_632534.1| - 5.8e-10 38.9 0.1 1.4e-07 31.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.13 gi|21226612|ref|NP_632534.1| - 5.6e-08 32.2 0.5 2.6e-07 30.0 0.3 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.14 gi|21226612|ref|NP_632534.1| - 0.00046 19.6 0.6 0.065 12.6 0.0 2.8 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.4 gi|21226612|ref|NP_632534.1| - 0.0013 18.2 0.1 0.31 10.5 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.18 gi|21226612|ref|NP_632534.1| - 0.0016 18.2 0.1 0.0079 16.0 0.0 2.0 1 1 1 2 2 2 1 Dynamin family GTP-bdg_N PF13167.1 gi|21226612|ref|NP_632534.1| - 0.0054 16.8 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal Arf PF00025.16 gi|21226612|ref|NP_632534.1| - 0.0075 15.5 0.1 0.024 13.8 0.1 1.9 1 1 0 1 1 1 1 ADP-ribosylation factor family AAA_29 PF13555.1 gi|21226612|ref|NP_632534.1| - 0.018 14.5 0.0 0.04 13.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21226612|ref|NP_632534.1| - 0.021 14.0 0.0 0.14 11.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|21226612|ref|NP_632534.1| - 0.021 15.1 2.8 0.17 12.1 0.1 2.4 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|21226612|ref|NP_632534.1| - 0.022 14.4 0.0 0.046 13.4 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.22 gi|21226612|ref|NP_632534.1| - 0.025 14.8 0.1 0.077 13.2 0.0 2.1 1 1 1 2 2 2 0 ABC transporter Miro PF08477.8 gi|21226612|ref|NP_632534.1| - 0.063 13.7 0.0 0.19 12.2 0.0 1.9 1 1 0 1 1 1 0 Miro-like protein T2SE PF00437.15 gi|21226612|ref|NP_632534.1| - 0.096 11.5 0.0 0.16 10.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ATP_bind_1 PF03029.12 gi|21226612|ref|NP_632534.1| - 0.12 11.9 0.1 0.69 9.4 0.0 2.1 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein Fzo_mitofusin PF04799.8 gi|21226612|ref|NP_632534.1| - 0.15 11.4 0.1 3.4 7.0 0.0 2.2 1 1 1 2 2 2 0 fzo-like conserved region NOG1 PF06858.9 gi|21226612|ref|NP_632534.1| - 0.15 11.9 0.3 1.3 9.0 0.0 2.4 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) DUF2209 PF09974.4 gi|21226613|ref|NP_632535.1| - 1.8e-60 202.6 0.1 2.1e-60 202.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) Methyltransf_7 PF03492.10 gi|21226613|ref|NP_632535.1| - 0.07 11.8 0.0 0.083 11.6 0.0 1.1 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase tRNA_int_endo PF01974.12 gi|21226614|ref|NP_632536.1| - 8.6e-49 163.2 2.9 5.2e-25 87.0 0.4 2.2 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|21226614|ref|NP_632536.1| - 9.6e-42 140.3 2.8 3.9e-21 74.3 0.0 2.5 2 0 0 2 2 2 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.2 gi|21226614|ref|NP_632536.1| - 0.0067 15.8 0.0 2.3 7.7 0.0 2.6 2 0 0 2 2 2 2 tRNA-splicing endonuclease subunit sen54 N-term Sen15 PF09631.5 gi|21226614|ref|NP_632536.1| - 0.096 12.9 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Sen15 protein GATase_3 PF07685.9 gi|21226615|ref|NP_632537.1| - 5.5e-35 120.2 0.2 1.1e-34 119.3 0.1 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|21226615|ref|NP_632537.1| - 4.3e-22 78.4 0.0 7.8e-22 77.6 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|21226615|ref|NP_632537.1| - 6.9e-18 64.9 0.1 3.4e-12 46.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain DUF2620 PF10941.3 gi|21226615|ref|NP_632537.1| - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF2620 MipZ PF09140.6 gi|21226615|ref|NP_632537.1| - 0.13 11.2 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_NifH PF00142.13 gi|21226616|ref|NP_632538.1| - 1.8e-87 292.9 1.3 2.2e-87 292.7 0.9 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|21226616|ref|NP_632538.1| - 6.5e-11 41.9 0.0 9.4e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|21226616|ref|NP_632538.1| - 5.5e-09 35.4 1.0 5.8e-08 32.1 0.3 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|21226616|ref|NP_632538.1| - 1.3e-06 28.4 0.0 2.8e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|21226616|ref|NP_632538.1| - 7.5e-05 21.6 0.1 0.00012 20.9 0.1 1.2 1 0 0 1 1 1 1 ArgK protein MipZ PF09140.6 gi|21226616|ref|NP_632538.1| - 0.00011 21.3 0.1 0.0042 16.1 0.0 2.2 2 0 0 2 2 2 1 ATPase MipZ SRP54 PF00448.17 gi|21226616|ref|NP_632538.1| - 0.00074 19.0 0.1 0.0013 18.2 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|21226616|ref|NP_632538.1| - 0.0012 18.3 0.0 0.002 17.6 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain AAA_16 PF13191.1 gi|21226616|ref|NP_632538.1| - 0.0037 17.2 0.1 0.039 13.9 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.1 gi|21226616|ref|NP_632538.1| - 0.0045 16.4 0.1 0.0083 15.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|21226616|ref|NP_632538.1| - 0.0048 16.5 0.2 0.055 13.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21226616|ref|NP_632538.1| - 0.01 15.9 0.0 0.023 14.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|21226616|ref|NP_632538.1| - 0.018 13.8 0.2 0.032 13.0 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|21226616|ref|NP_632538.1| - 0.022 14.3 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|21226616|ref|NP_632538.1| - 0.026 14.0 0.3 0.33 10.4 0.2 2.3 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein MobB PF03205.9 gi|21226616|ref|NP_632538.1| - 0.03 14.0 0.1 0.056 13.1 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.1 gi|21226616|ref|NP_632538.1| - 0.034 13.8 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain adh_short_C2 PF13561.1 gi|21226616|ref|NP_632538.1| - 0.038 13.7 0.2 0.98 9.1 0.0 2.4 2 1 0 3 3 3 0 Enoyl-(Acyl carrier protein) reductase RNA_helicase PF00910.17 gi|21226616|ref|NP_632538.1| - 0.13 12.4 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Oxidored_nitro PF00148.14 gi|21226617|ref|NP_632539.1| - 7.9e-18 64.2 0.0 9.7e-18 63.9 0.0 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GvpG PF05120.7 gi|21226617|ref|NP_632539.1| - 0.011 15.4 0.1 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 Gas vesicle protein G Mur_ligase_M PF08245.7 gi|21226618|ref|NP_632540.1| - 9.7e-07 29.0 0.0 2.9e-06 27.4 0.0 1.8 1 1 0 1 1 1 1 Mur ligase middle domain CbiX PF01903.12 gi|21226619|ref|NP_632541.1| - 5e-30 103.7 0.0 5.7e-30 103.5 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.6 gi|21226619|ref|NP_632541.1| - 8.7e-08 31.5 0.0 1e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|21226619|ref|NP_632541.1| - 0.011 14.7 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase PAS_9 PF13426.1 gi|21226620|ref|NP_632542.1| - 5.1e-49 164.9 0.6 1.7e-20 73.3 0.0 4.8 5 0 0 5 5 5 3 PAS domain PAS PF00989.19 gi|21226620|ref|NP_632542.1| - 1.5e-38 131.0 0.0 2.2e-16 59.6 0.0 4.6 4 0 0 4 4 4 3 PAS fold PAS_3 PF08447.6 gi|21226620|ref|NP_632542.1| - 4.9e-38 129.1 1.0 3.5e-19 68.6 0.0 4.2 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|21226620|ref|NP_632542.1| - 1.2e-34 118.6 0.0 4.8e-16 58.7 0.0 3.6 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.7 gi|21226620|ref|NP_632542.1| - 4.2e-31 106.6 1.0 4.2e-31 106.6 0.7 2.8 4 0 0 4 4 3 1 Histidine kinase PAS_8 PF13188.1 gi|21226620|ref|NP_632542.1| - 1.7e-16 59.4 0.0 3.7e-09 36.0 0.0 3.7 4 0 0 4 4 3 2 PAS domain HATPase_c PF02518.21 gi|21226620|ref|NP_632542.1| - 1.4e-13 50.5 0.1 5e-13 48.7 0.1 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|21226620|ref|NP_632542.1| - 3.7e-09 36.7 0.5 0.00078 19.6 0.0 3.7 4 0 0 4 4 3 2 PAS domain GAF_2 PF13185.1 gi|21226620|ref|NP_632542.1| - 4.1e-09 37.0 0.0 1e-08 35.7 0.0 1.7 1 0 0 1 1 1 1 GAF domain PAS_7 PF12860.2 gi|21226620|ref|NP_632542.1| - 1.5e-08 34.6 2.2 0.00074 19.5 0.0 4.9 5 1 0 5 5 5 1 PAS fold GAF_3 PF13492.1 gi|21226620|ref|NP_632542.1| - 4.4e-08 33.2 0.0 9.6e-08 32.1 0.0 1.6 1 0 0 1 1 1 1 GAF domain GAF PF01590.21 gi|21226620|ref|NP_632542.1| - 4.9e-07 29.9 0.0 9.7e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.1 gi|21226620|ref|NP_632542.1| - 4.5e-06 26.5 0.0 0.054 13.4 0.0 3.6 3 0 0 3 3 3 1 PAS domain HATPase_c_2 PF13581.1 gi|21226620|ref|NP_632542.1| - 0.0041 16.9 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21226620|ref|NP_632542.1| - 0.017 15.5 0.7 0.044 14.2 0.1 2.0 2 0 0 2 2 1 0 HWE histidine kinase Tocopherol_cycl PF14249.1 gi|21226621|ref|NP_632543.1| - 3.8e-25 88.3 0.1 4.5e-21 74.9 0.0 2.1 2 0 0 2 2 2 2 Tocopherol cyclase Methylase_S PF01420.14 gi|21226623|ref|NP_632545.1| - 0.13 12.2 0.3 0.15 11.9 0.2 1.0 1 0 0 1 1 1 0 Type I restriction modification DNA specificity domain Transposase_20 PF02371.11 gi|21226624|ref|NP_632546.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21226624|ref|NP_632546.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21226624|ref|NP_632546.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein DUF624 PF04854.9 gi|21226625|ref|NP_632547.1| - 0.14 12.0 0.1 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF624 DUF389 PF04087.9 gi|21226626|ref|NP_632548.1| - 3e-36 124.4 17.7 3e-36 124.4 12.3 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF389) PTS_EIIC_2 PF13303.1 gi|21226626|ref|NP_632548.1| - 0.66 8.7 28.8 13 4.5 20.0 2.4 1 1 0 1 1 1 0 Phosphotransferase system, EIIC DUF2892 PF11127.3 gi|21226627|ref|NP_632549.1| - 6.2e-06 25.9 0.0 9.1e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Cas_Csd1 PF09709.5 gi|21226627|ref|NP_632549.1| - 0.0033 15.7 0.1 0.0043 15.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csd1) Wzy_C PF04932.10 gi|21226628|ref|NP_632550.1| - 0.092 12.5 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase Transglut_core PF01841.14 gi|21226629|ref|NP_632551.1| - 1.4e-09 38.1 0.1 3.2e-09 36.9 0.1 1.6 1 1 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.7 gi|21226629|ref|NP_632551.1| - 0.0028 16.9 0.1 0.005 16.1 0.0 1.4 1 1 0 1 1 1 1 Transglutaminase-like domain Peptidase_C71 PF12386.3 gi|21226629|ref|NP_632551.1| - 0.011 15.2 0.6 0.016 14.6 0.4 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Peptidase_C93 PF06035.6 gi|21226629|ref|NP_632551.1| - 0.084 12.2 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP Abhydrolase_6 PF12697.2 gi|21226631|ref|NP_632553.1| - 1.7e-33 116.4 0.0 2e-33 116.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|21226631|ref|NP_632553.1| - 2.6e-18 66.4 0.0 2e-16 60.2 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|21226631|ref|NP_632553.1| - 1.5e-13 50.6 0.0 5.2e-13 48.9 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|21226631|ref|NP_632553.1| - 0.0001 22.1 0.1 0.00018 21.2 0.1 1.3 1 0 0 1 1 1 1 Putative lysophospholipase Ndr PF03096.9 gi|21226631|ref|NP_632553.1| - 0.0017 16.9 0.0 0.01 14.3 0.0 1.9 1 1 0 1 1 1 1 Ndr family Esterase PF00756.15 gi|21226631|ref|NP_632553.1| - 0.13 11.6 0.0 0.38 10.1 0.0 1.9 3 0 0 3 3 3 0 Putative esterase AA_permease PF00324.16 gi|21226632|ref|NP_632554.1| - 2.9e-43 147.9 42.2 4e-43 147.4 29.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|21226632|ref|NP_632554.1| - 7.7e-42 143.3 47.4 1e-41 142.8 32.9 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.21 gi|21226632|ref|NP_632554.1| - 2e-27 96.0 0.0 2e-12 47.4 0.0 2.4 2 0 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.8 gi|21226632|ref|NP_632554.1| - 5e-12 45.1 16.4 5e-12 45.1 11.4 1.9 2 0 0 2 2 2 1 Spore germination protein DcpS PF05652.7 gi|21226633|ref|NP_632555.1| - 0.057 13.8 0.2 0.08 13.3 0.1 1.3 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme (DcpS) N-terminal DUF573 PF04504.9 gi|21226633|ref|NP_632555.1| - 0.074 13.3 0.3 0.074 13.3 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function, DUF573 NTP_transf_2 PF01909.18 gi|21226634|ref|NP_632556.1| - 0.057 13.7 0.0 0.067 13.5 0.0 1.5 1 1 0 1 1 1 0 Nucleotidyltransferase domain DUF2578 PF10843.3 gi|21226635|ref|NP_632557.1| - 0.017 14.8 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2578) DUF3942 PF13078.1 gi|21226635|ref|NP_632557.1| - 0.027 14.5 0.4 0.064 13.3 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3942) Acyl_transf_3 PF01757.17 gi|21226636|ref|NP_632558.1| - 6.7e-29 100.7 45.8 3.5e-28 98.4 31.8 1.8 1 1 0 1 1 1 1 Acyltransferase family SpoVAB PF13782.1 gi|21226636|ref|NP_632558.1| - 0.096 12.6 0.4 0.096 12.6 0.3 2.9 2 1 1 3 3 3 0 Stage V sporulation protein AB CxxCxxCC PF03692.10 gi|21226637|ref|NP_632559.1| - 0.078 13.4 0.1 0.098 13.1 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain NosD PF05048.8 gi|21226638|ref|NP_632560.1| - 5.8e-13 48.5 16.4 7.3e-13 48.2 11.4 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21226638|ref|NP_632560.1| - 3e-11 43.3 44.4 3.7e-10 39.7 13.4 1.5 1 1 1 2 2 2 2 Right handed beta helix region DUF1565 PF07602.6 gi|21226638|ref|NP_632560.1| - 2.6e-05 23.5 16.6 0.0039 16.3 11.5 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1565) Cupin_2 PF07883.6 gi|21226639|ref|NP_632561.1| - 6.1e-18 64.0 0.1 8.1e-18 63.6 0.0 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|21226639|ref|NP_632561.1| - 0.0002 21.0 0.0 0.00027 20.6 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.13 gi|21226639|ref|NP_632561.1| - 0.00024 20.7 0.0 0.00029 20.4 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|21226639|ref|NP_632561.1| - 0.00037 20.3 0.0 0.00048 20.0 0.0 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_1 PF00190.17 gi|21226639|ref|NP_632561.1| - 0.0034 16.8 0.0 0.0041 16.5 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|21226639|ref|NP_632561.1| - 0.03 13.7 0.0 0.047 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cupin_6 PF12852.2 gi|21226639|ref|NP_632561.1| - 0.13 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Cupin DUF1958 PF09211.5 gi|21226639|ref|NP_632561.1| - 0.14 12.2 0.1 0.81 9.8 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1958) DUF3763 PF12592.3 gi|21226640|ref|NP_632562.1| - 0.12 12.0 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3763) CENP-B_dimeris PF09026.5 gi|21226641|ref|NP_632563.1| - 0.17 12.1 3.5 0.18 12.0 2.4 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Histone_HNS PF00816.16 gi|21226641|ref|NP_632563.1| - 0.21 12.0 4.2 0.23 11.9 2.9 1.1 1 0 0 1 1 1 0 H-NS histone family Peptidase_S49_N PF08496.5 gi|21226641|ref|NP_632563.1| - 0.45 10.3 4.3 0.48 10.2 3.0 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2779 PF11074.3 gi|21226641|ref|NP_632563.1| - 0.56 10.2 3.0 0.63 10.0 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) DUF2098 PF09871.4 gi|21226641|ref|NP_632563.1| - 0.69 9.8 5.6 0.7 9.8 3.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) IncA PF04156.9 gi|21226641|ref|NP_632563.1| - 1.9 8.0 5.5 2.2 7.8 3.8 1.0 1 0 0 1 1 1 0 IncA protein SHR3_chaperone PF08229.6 gi|21226641|ref|NP_632563.1| - 2 7.3 5.1 2.2 7.2 3.5 1.0 1 0 0 1 1 1 0 ER membrane protein SH3 VIT1 PF01988.14 gi|21226641|ref|NP_632563.1| - 2.1 7.7 4.7 2.4 7.6 3.3 1.0 1 0 0 1 1 1 0 VIT family Radial_spoke PF04712.7 gi|21226641|ref|NP_632563.1| - 3.6 6.2 9.5 3.5 6.2 6.6 1.0 1 0 0 1 1 1 0 Radial spokehead-like protein DUF4342 PF14242.1 gi|21226641|ref|NP_632563.1| - 9 6.1 7.7 12 5.7 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) Metallophos PF00149.23 gi|21226642|ref|NP_632564.1| - 4.6e-14 52.2 1.6 9.3e-14 51.2 1.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|21226642|ref|NP_632564.1| - 2.3e-11 43.7 0.0 3.5e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Glyco_tran_WecB PF03808.8 gi|21226642|ref|NP_632564.1| - 0.11 11.9 0.0 0.27 10.6 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family OppC_N PF12911.2 gi|21226642|ref|NP_632564.1| - 0.12 11.7 1.1 0.26 10.7 0.3 1.9 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DUF1510 PF07423.6 gi|21226643|ref|NP_632565.1| - 1.1 8.5 3.6 1.6 8.0 0.7 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1510) RNB PF00773.14 gi|21226646|ref|NP_632568.1| - 5.1e-65 219.8 0.0 8.1e-65 219.2 0.0 1.2 1 0 0 1 1 1 1 RNB domain dsrm PF00035.20 gi|21226646|ref|NP_632568.1| - 4.6e-14 52.7 0.1 1.3e-10 41.7 0.1 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif DND1_DSRM PF14709.1 gi|21226646|ref|NP_632568.1| - 0.00011 22.4 0.4 0.011 15.9 0.2 2.8 2 1 0 2 2 2 1 double strand RNA binding domain from DEAD END PROTEIN 1 Plasmid_stabil PF05016.9 gi|21226648|ref|NP_632570.1| - 0.0018 18.6 0.0 0.0025 18.1 0.0 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF4358 PF14270.1 gi|21226648|ref|NP_632570.1| - 0.0064 16.3 0.1 0.0086 15.9 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4358) Ycf4 PF02392.11 gi|21226649|ref|NP_632571.1| - 7.7 5.7 10.7 1.9 7.7 3.7 2.2 2 0 0 2 2 2 0 Ycf4 Fic PF02661.13 gi|21226651|ref|NP_632573.1| - 4e-11 43.4 0.0 7.5e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Fic/DOC family HTH_32 PF13565.1 gi|21226651|ref|NP_632573.1| - 0.03 15.0 0.0 0.055 14.2 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF217 PF02697.9 gi|21226652|ref|NP_632574.1| - 0.00017 21.7 1.8 0.00024 21.3 1.2 1.4 1 1 0 1 1 1 1 Uncharacterized ACR, COG1753 Rota_NSP3 PF01665.11 gi|21226652|ref|NP_632574.1| - 0.046 12.6 0.1 0.051 12.5 0.1 1.0 1 0 0 1 1 1 0 Rotavirus non-structural protein NSP3 Mt_ATP-synt_B PF05405.9 gi|21226652|ref|NP_632574.1| - 0.11 11.9 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) IBR PF01485.16 gi|21226655|ref|NP_632577.1| - 0.029 14.2 2.0 1.9 8.4 0.1 2.1 1 1 1 2 2 2 0 IBR domain EGF PF00008.22 gi|21226655|ref|NP_632577.1| - 2.9 7.9 6.8 8.1 6.5 0.3 2.3 2 0 0 2 2 2 0 EGF-like domain FXa_inhibition PF14670.1 gi|21226655|ref|NP_632577.1| - 3.8 7.7 7.4 15 5.8 0.6 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site Cas_Cas4 PF01930.12 gi|21226659|ref|NP_632581.1| - 2.8e-18 66.3 7.5 3.4e-18 66.0 5.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|21226659|ref|NP_632581.1| - 3.4e-11 43.0 1.6 3.4e-11 43.0 1.1 1.7 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily Phage_NinH PF06322.6 gi|21226659|ref|NP_632581.1| - 0.044 13.4 0.4 0.14 11.8 0.0 2.0 2 0 0 2 2 2 0 Phage NinH protein CRISPR_Cas2 PF09827.4 gi|21226660|ref|NP_632582.1| - 1e-22 80.0 0.5 1.2e-22 79.7 0.4 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas2CT1978 PF09707.5 gi|21226660|ref|NP_632582.1| - 0.047 13.6 0.0 0.065 13.1 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Cas_Cas1 PF01867.11 gi|21226661|ref|NP_632583.1| - 1.8e-79 266.7 0.0 2.1e-79 266.5 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 DUF2276 PF10040.4 gi|21226662|ref|NP_632584.1| - 0.13 12.5 0.4 0.58 10.3 0.2 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2276) DEAD PF00270.24 gi|21226663|ref|NP_632585.1| - 3e-09 36.6 0.0 1e-08 34.8 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|21226663|ref|NP_632585.1| - 8.9e-07 28.9 5.5 6.1e-06 26.1 0.9 3.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HD PF01966.17 gi|21226663|ref|NP_632585.1| - 0.00031 20.7 0.8 0.00092 19.2 0.1 2.2 2 0 0 2 2 2 1 HD domain AAA_22 PF13401.1 gi|21226663|ref|NP_632585.1| - 0.0026 17.9 0.3 0.05 13.7 0.1 2.9 2 1 0 2 2 2 1 AAA domain PhoH PF02562.11 gi|21226663|ref|NP_632585.1| - 0.0058 15.8 0.0 0.3 10.3 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein Helicase_C PF00271.26 gi|21226663|ref|NP_632585.1| - 0.0072 16.1 0.1 0.057 13.2 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain IstB_IS21 PF01695.12 gi|21226663|ref|NP_632585.1| - 0.0099 15.3 0.0 0.52 9.6 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein Cas_Cas5d PF09704.5 gi|21226664|ref|NP_632586.1| - 3e-07 30.2 0.0 4.4e-07 29.7 0.0 1.3 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DUF694 PF05107.7 gi|21226665|ref|NP_632587.1| - 4e-57 193.5 0.2 4.5e-57 193.3 0.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF694) Cas_TM1802 PF09484.5 gi|21226666|ref|NP_632588.1| - 9.6e-124 414.0 33.8 2.7e-123 412.5 23.4 1.6 1 1 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) NMD3 PF04981.8 gi|21226666|ref|NP_632588.1| - 0.03 13.4 2.7 0.035 13.2 0.9 1.8 2 0 0 2 2 2 0 NMD3 family HTH_24 PF13412.1 gi|21226667|ref|NP_632589.1| - 2.1e-07 30.1 0.1 3.9e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.1 gi|21226667|ref|NP_632589.1| - 5.4e-07 29.3 0.1 1.1e-06 28.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix Cas_APE2256 PF09651.5 gi|21226667|ref|NP_632589.1| - 1.2e-05 25.0 0.1 2.4e-05 24.0 0.0 1.6 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) DUF1887 PF09002.6 gi|21226667|ref|NP_632589.1| - 3.4e-05 22.4 0.2 4.1e-05 22.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) HTH_5 PF01022.15 gi|21226667|ref|NP_632589.1| - 4.1e-05 23.1 0.1 9.1e-05 22.0 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|21226667|ref|NP_632589.1| - 0.00013 21.5 0.4 0.0004 20.0 0.0 2.0 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB Cas_Cas02710 PF09670.5 gi|21226667|ref|NP_632589.1| - 0.00017 20.3 0.1 0.00023 19.9 0.1 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) HTH_20 PF12840.2 gi|21226667|ref|NP_632589.1| - 0.002 17.8 0.0 0.0039 16.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|21226667|ref|NP_632589.1| - 0.015 15.5 0.1 0.061 13.6 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|21226667|ref|NP_632589.1| - 0.02 14.4 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_28 PF13518.1 gi|21226667|ref|NP_632589.1| - 0.032 14.2 0.0 0.062 13.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|21226667|ref|NP_632589.1| - 0.038 13.6 0.1 0.092 12.4 0.0 1.6 1 0 0 1 1 1 0 HTH domain MarR PF01047.17 gi|21226667|ref|NP_632589.1| - 0.054 13.2 0.3 0.16 11.7 0.1 1.9 2 0 0 2 2 2 0 MarR family HTH_36 PF13730.1 gi|21226667|ref|NP_632589.1| - 0.055 13.5 0.5 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain RNase_HII PF01351.13 gi|21226667|ref|NP_632589.1| - 0.057 13.0 0.7 0.33 10.5 0.1 2.0 2 0 0 2 2 2 0 Ribonuclease HII Cas_NE0113 PF09623.5 gi|21226667|ref|NP_632589.1| - 0.062 12.7 0.0 0.13 11.6 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) TetR_N PF00440.18 gi|21226667|ref|NP_632589.1| - 0.13 11.9 0.1 0.27 10.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family DNA_alkylation PF08713.6 gi|21226668|ref|NP_632590.1| - 2.9e-69 232.8 1.5 3.3e-69 232.6 1.0 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme YvbH_ext PF11724.3 gi|21226668|ref|NP_632590.1| - 5.8e-05 22.6 0.7 0.0002 20.9 0.5 1.9 1 0 0 1 1 1 1 YvbH-like oligomerisation region Dna2 PF08696.6 gi|21226668|ref|NP_632590.1| - 0.0042 16.4 0.0 0.0066 15.7 0.0 1.4 1 0 0 1 1 1 1 DNA replication factor Dna2 HEAT_2 PF13646.1 gi|21226668|ref|NP_632590.1| - 0.14 12.4 0.0 4.3 7.7 0.0 2.3 2 0 0 2 2 2 0 HEAT repeats Acetyltransf_3 PF13302.1 gi|21226669|ref|NP_632591.1| - 1.2e-21 77.3 0.0 1.5e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21226669|ref|NP_632591.1| - 3.3e-13 49.8 0.4 3.6e-13 49.7 0.3 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21226669|ref|NP_632591.1| - 3.4e-12 46.2 0.0 5.3e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 gi|21226669|ref|NP_632591.1| - 4.3e-05 23.4 0.0 5.2e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|21226669|ref|NP_632591.1| - 0.0047 17.0 0.2 0.015 15.4 0.1 1.9 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain ABC_tran PF00005.22 gi|21226672|ref|NP_632594.1| - 1.6e-24 86.7 0.0 2.7e-24 85.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226672|ref|NP_632594.1| - 4.1e-10 40.0 4.4 5.9e-07 29.7 3.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|21226672|ref|NP_632594.1| - 3.1e-05 24.1 0.1 0.00017 21.7 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21226672|ref|NP_632594.1| - 5.8e-05 23.1 0.2 0.003 17.5 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_15 PF13175.1 gi|21226672|ref|NP_632594.1| - 0.00011 21.4 0.1 0.4 9.6 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_10 PF12846.2 gi|21226672|ref|NP_632594.1| - 0.00013 21.5 0.1 0.033 13.6 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain AAA_29 PF13555.1 gi|21226672|ref|NP_632594.1| - 0.00015 21.1 0.5 0.00052 19.4 0.1 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|21226672|ref|NP_632594.1| - 0.00054 19.2 0.7 0.0019 17.4 0.2 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|21226672|ref|NP_632594.1| - 0.00065 20.0 0.3 0.0013 19.0 0.2 1.5 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|21226672|ref|NP_632594.1| - 0.0017 18.3 0.2 0.0067 16.3 0.0 1.9 1 1 0 2 2 2 1 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.13 gi|21226672|ref|NP_632594.1| - 0.0042 16.5 0.1 0.011 15.1 0.0 1.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family NTPase_1 PF03266.10 gi|21226672|ref|NP_632594.1| - 0.0048 16.6 0.1 2.7 7.6 0.0 2.3 2 0 0 2 2 2 2 NTPase Miro PF08477.8 gi|21226672|ref|NP_632594.1| - 0.0055 17.1 0.0 0.012 16.1 0.0 1.5 1 0 0 1 1 1 1 Miro-like protein DUF815 PF05673.8 gi|21226672|ref|NP_632594.1| - 0.0057 15.6 0.0 0.0085 15.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF258 PF03193.11 gi|21226672|ref|NP_632594.1| - 0.0082 15.3 0.1 0.013 14.7 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_14 PF13173.1 gi|21226672|ref|NP_632594.1| - 0.0085 15.9 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|21226672|ref|NP_632594.1| - 0.015 15.0 0.1 0.055 13.1 0.0 1.9 2 0 0 2 2 2 0 Archaeal ATPase AAA_24 PF13479.1 gi|21226672|ref|NP_632594.1| - 0.015 14.9 0.0 0.12 11.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|21226672|ref|NP_632594.1| - 0.021 15.6 0.4 0.039 14.7 0.3 1.9 1 1 0 1 1 1 0 AAA domain MobB PF03205.9 gi|21226672|ref|NP_632594.1| - 0.029 14.0 0.3 0.078 12.6 0.0 1.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.12 gi|21226672|ref|NP_632594.1| - 0.037 13.8 0.2 0.079 12.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function DUF87 ATP-synt_ab PF00006.20 gi|21226672|ref|NP_632594.1| - 0.041 13.3 0.0 0.055 12.9 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_33 PF13671.1 gi|21226672|ref|NP_632594.1| - 0.063 13.1 0.0 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.12 gi|21226672|ref|NP_632594.1| - 0.094 12.1 0.2 1.1 8.6 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Metallophos_2 PF12850.2 gi|21226673|ref|NP_632595.1| - 2.1e-17 63.3 0.0 2.9e-17 62.9 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21226673|ref|NP_632595.1| - 1.5e-14 53.8 3.6 1.9e-13 50.2 2.5 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|21226673|ref|NP_632595.1| - 0.0015 17.7 0.0 0.0024 17.0 0.0 1.3 1 0 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily MutL PF13941.1 gi|21226673|ref|NP_632595.1| - 0.031 12.6 0.0 0.041 12.2 0.0 1.1 1 0 0 1 1 1 0 MutL protein BtpA PF03437.10 gi|21226673|ref|NP_632595.1| - 0.057 12.6 0.0 0.082 12.1 0.0 1.2 1 0 0 1 1 1 0 BtpA family DNA_pol_E_B PF04042.11 gi|21226673|ref|NP_632595.1| - 0.14 11.4 0.0 0.23 10.6 0.0 1.4 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Alk_phosphatase PF00245.15 gi|21226674|ref|NP_632596.1| - 1.3e-87 294.2 0.1 1.9e-87 293.6 0.0 1.2 1 0 0 1 1 1 1 Alkaline phosphatase Metalloenzyme PF01676.13 gi|21226674|ref|NP_632596.1| - 0.012 15.0 0.2 0.058 12.7 0.0 2.1 3 0 0 3 3 3 0 Metalloenzyme superfamily PsiE PF06146.7 gi|21226675|ref|NP_632597.1| - 4.9e-12 45.9 4.4 4.9e-12 45.9 3.0 2.0 2 1 0 2 2 2 1 Phosphate-starvation-inducible E Phage_Coat_Gp8 PF05371.7 gi|21226675|ref|NP_632597.1| - 0.043 13.3 1.5 1 9.0 0.3 2.4 2 0 0 2 2 2 0 Phage major coat protein, Gp8 LMWPc PF01451.16 gi|21226676|ref|NP_632598.1| - 9.7e-27 93.9 0.0 1.1e-26 93.7 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase Rad50_zn_hook PF04423.9 gi|21226676|ref|NP_632598.1| - 0.073 12.5 0.1 0.18 11.2 0.1 1.6 1 0 0 1 1 1 0 Rad50 zinc hook motif PhoU PF01895.14 gi|21226677|ref|NP_632599.1| - 3e-22 78.8 9.4 1.4e-17 63.8 1.0 2.5 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|21226677|ref|NP_632599.1| - 3e-10 39.5 0.0 5.8e-10 38.6 0.0 1.5 1 0 0 1 1 1 1 Antidote-toxin recognition MazE PhoU PF01895.14 gi|21226678|ref|NP_632600.1| - 5.7e-33 113.2 8.0 5.8e-20 71.5 1.0 2.1 2 0 0 2 2 2 2 PhoU domain ABC_tran PF00005.22 gi|21226679|ref|NP_632601.1| - 0.00058 20.1 0.0 0.0008 19.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.1 gi|21226679|ref|NP_632601.1| - 0.0034 17.5 0.0 0.0044 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.10 gi|21226679|ref|NP_632601.1| - 0.013 14.2 0.0 0.017 13.8 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein Viral_helicase1 PF01443.13 gi|21226679|ref|NP_632601.1| - 0.021 14.3 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.1 gi|21226679|ref|NP_632601.1| - 0.042 13.8 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.1 gi|21226679|ref|NP_632601.1| - 0.12 11.8 0.1 0.25 10.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21226679|ref|NP_632601.1| - 0.13 11.4 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 DUF4227 PF14004.1 gi|21226679|ref|NP_632601.1| - 1.2 9.0 6.4 0.099 12.5 1.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) PBP_like_2 PF12849.2 gi|21226680|ref|NP_632602.1| - 8e-50 169.8 4.7 1.4e-49 169.0 3.3 1.3 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.2 gi|21226680|ref|NP_632602.1| - 2.3e-22 78.9 0.0 2.8e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|21226680|ref|NP_632602.1| - 1.5e-08 34.5 0.0 2.5e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|21226680|ref|NP_632602.1| - 0.037 13.7 0.6 0.12 12.1 0.4 1.8 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein OrfB_Zn_ribbon PF07282.6 gi|21226681|ref|NP_632603.1| - 4e-27 93.6 0.5 8.1e-27 92.6 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.14 gi|21226681|ref|NP_632603.1| - 0.0026 17.4 2.5 0.0055 16.3 0.4 2.2 2 0 0 2 2 2 1 Hydrogenase expression/synthesis hypA family OrfB_IS605 PF01385.14 gi|21226681|ref|NP_632603.1| - 0.0028 17.0 1.5 0.0044 16.4 1.0 1.3 1 0 0 1 1 1 1 Probable transposase BsuBI_PstI_RE PF06616.6 gi|21226681|ref|NP_632603.1| - 0.033 12.9 0.3 0.17 10.6 0.0 1.9 2 0 0 2 2 2 0 BsuBI/PstI restriction endonuclease C-terminus DUF2775 PF10950.3 gi|21226681|ref|NP_632603.1| - 1.3 9.2 4.7 0.42 10.8 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2775) UPF0547 PF10571.4 gi|21226681|ref|NP_632603.1| - 1.5 8.5 9.3 2.7 7.7 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.1 gi|21226681|ref|NP_632603.1| - 4.6 6.5 8.7 9.9 5.5 0.3 2.4 1 1 2 3 3 3 0 zinc-ribbon domain HAD_2 PF13419.1 gi|21226682|ref|NP_632604.1| - 1.6e-22 80.5 0.0 1.9e-22 80.3 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21226682|ref|NP_632604.1| - 1.9e-05 24.3 0.0 3.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|21226682|ref|NP_632604.1| - 0.005 17.2 0.0 0.008 16.6 0.0 1.5 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase DUF3206 PF11472.3 gi|21226682|ref|NP_632604.1| - 0.045 13.5 0.0 0.071 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3206) PHP PF02811.14 gi|21226683|ref|NP_632605.1| - 1.4e-05 24.9 0.0 1.7e-05 24.6 0.0 1.4 1 1 0 1 1 1 1 PHP domain PHP_C PF13263.1 gi|21226683|ref|NP_632605.1| - 0.16 11.4 0.2 0.56 9.7 0.1 2.0 2 0 0 2 2 2 0 PHP-associated Glyco_trans_1_3 PF13528.1 gi|21226684|ref|NP_632606.1| - 3.2e-34 118.5 0.0 4e-19 68.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|21226684|ref|NP_632606.1| - 4.6e-15 55.6 0.0 8.1e-15 54.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.15 gi|21226684|ref|NP_632606.1| - 5.8e-07 29.3 0.0 1.3e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_1_4 PF13692.1 gi|21226684|ref|NP_632606.1| - 4.9e-05 23.4 0.0 8.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21226684|ref|NP_632606.1| - 0.0014 18.4 0.0 0.0042 16.9 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase 4-like UDPGT PF00201.13 gi|21226684|ref|NP_632606.1| - 0.01 14.4 0.0 0.016 13.7 0.0 1.2 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase DUF1638 PF07796.6 gi|21226685|ref|NP_632607.1| - 7.4e-42 142.7 0.0 9.9e-42 142.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Paramyxo_PCT PF14320.1 gi|21226685|ref|NP_632607.1| - 0.17 10.7 0.0 0.23 10.3 0.0 1.1 1 0 0 1 1 1 0 Phosphoprotein P region PCT disordered DUF1638 PF07796.6 gi|21226686|ref|NP_632608.1| - 1.2e-42 145.4 0.3 2.4e-42 144.3 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) Imm17 PF15591.1 gi|21226686|ref|NP_632608.1| - 0.019 14.7 0.6 0.047 13.4 0.1 1.9 2 0 0 2 2 2 0 Immunity protein 17 Spore_YhcN_YlaJ PF09580.5 gi|21226686|ref|NP_632608.1| - 0.17 11.9 0.0 0.68 10.0 0.0 1.8 2 0 0 2 2 2 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) Glycogen_syn PF05693.8 gi|21226687|ref|NP_632609.1| - 1.6e-16 59.6 0.0 2.7e-09 35.8 0.0 3.1 3 1 0 3 3 3 2 Glycogen synthase Glyco_transf_5 PF08323.6 gi|21226687|ref|NP_632609.1| - 0.00049 19.6 0.0 0.0022 17.5 0.0 1.9 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.15 gi|21226687|ref|NP_632609.1| - 0.0029 17.0 0.1 0.014 14.8 0.0 2.1 3 0 0 3 3 3 1 Glycosyl transferases group 1 GalP_UDP_transf PF01087.17 gi|21226688|ref|NP_632610.1| - 4.2e-12 46.4 0.0 4.4e-11 43.1 0.0 2.5 2 1 0 2 2 2 1 Galactose-1-phosphate uridyl transferase, N-terminal domain Cas_CXXC_CXXC PF09706.5 gi|21226688|ref|NP_632610.1| - 0.017 15.2 3.7 0.2 11.8 0.0 3.1 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_CXXC_CXXC) GalP_UDP_tr_C PF02744.12 gi|21226688|ref|NP_632610.1| - 0.081 12.4 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain DcpS_C PF11969.3 gi|21226688|ref|NP_632610.1| - 0.12 12.6 0.0 0.64 10.2 0.0 2.0 2 0 0 2 2 2 0 Scavenger mRNA decapping enzyme C-term binding HIT PF01230.18 gi|21226688|ref|NP_632610.1| - 0.15 12.6 0.0 3.4 8.2 0.0 2.2 2 0 0 2 2 2 0 HIT domain Glycos_transf_1 PF00534.15 gi|21226689|ref|NP_632611.1| - 2.1e-31 108.6 0.0 4.5e-31 107.5 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21226689|ref|NP_632611.1| - 3.5e-20 72.7 0.0 5.9e-20 72.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|21226689|ref|NP_632611.1| - 4.6e-15 55.9 0.0 1e-14 54.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|21226689|ref|NP_632611.1| - 8.9e-14 51.5 0.1 3.3e-06 26.7 0.0 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_transf_4 PF13439.1 gi|21226689|ref|NP_632611.1| - 6.2e-12 45.5 0.3 5.2e-11 42.5 0.2 2.1 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|21226689|ref|NP_632611.1| - 2.3e-06 27.4 0.0 4.9e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|21226689|ref|NP_632611.1| - 0.0017 18.6 0.0 0.004 17.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2150 PF09920.4 gi|21226690|ref|NP_632612.1| - 8e-73 244.0 5.2 9.5e-73 243.8 3.6 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) UPF0179 PF03684.8 gi|21226691|ref|NP_632613.1| - 6.1e-54 181.4 3.3 6.8e-54 181.3 2.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) Fe-ADH_2 PF13685.1 gi|21226692|ref|NP_632614.1| - 1.1e-74 250.8 1.2 1.4e-74 250.5 0.9 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|21226692|ref|NP_632614.1| - 5.9e-28 97.5 5.3 1.5e-27 96.2 3.7 1.5 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|21226692|ref|NP_632614.1| - 2.5e-10 39.7 0.2 1.4e-09 37.2 0.2 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.15 gi|21226692|ref|NP_632614.1| - 0.0036 16.5 0.3 0.01 15.1 0.2 1.8 1 1 0 1 1 1 1 AIR carboxylase Ribosomal_S11 PF00411.14 gi|21226692|ref|NP_632614.1| - 0.038 14.1 0.0 0.1 12.8 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein S11 DUF63 PF01889.12 gi|21226693|ref|NP_632615.1| - 3.4e-105 352.0 12.0 3.8e-105 351.8 8.3 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 DUF2627 PF11118.3 gi|21226693|ref|NP_632615.1| - 0.049 13.7 1.5 0.094 12.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF95 PF01944.12 gi|21226694|ref|NP_632616.1| - 6.5e-34 117.0 20.3 8e-34 116.7 14.1 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF95 DUF1297 PF06973.7 gi|21226695|ref|NP_632617.1| - 2.8e-78 261.5 0.0 3.8e-78 261.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|21226695|ref|NP_632617.1| - 1.2e-44 151.0 0.0 2e-44 150.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|21226695|ref|NP_632617.1| - 0.032 13.9 0.0 2.6 7.7 0.0 2.4 1 1 0 1 1 1 0 ATP-grasp domain GTP_EFTU PF00009.22 gi|21226696|ref|NP_632618.1| - 2.4e-44 151.0 0.2 3.8e-44 150.3 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|21226696|ref|NP_632618.1| - 4.8e-29 100.2 0.8 1.1e-28 99.0 0.5 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|21226696|ref|NP_632618.1| - 2.1e-07 30.9 0.3 6.2e-07 29.4 0.2 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 PolC_DP2 PF03833.8 gi|21226696|ref|NP_632618.1| - 0.00082 17.1 0.3 0.0011 16.7 0.2 1.1 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 MMR_HSR1 PF01926.18 gi|21226696|ref|NP_632618.1| - 0.0009 19.1 0.0 0.003 17.4 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase PduV-EutP PF10662.4 gi|21226696|ref|NP_632618.1| - 0.0031 16.9 3.9 1.1 8.7 0.0 3.0 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.13 gi|21226696|ref|NP_632618.1| - 0.0051 16.1 1.6 0.78 9.0 0.5 2.9 2 1 0 2 2 2 1 Ferrous iron transport protein B Nop10p PF04135.7 gi|21226696|ref|NP_632618.1| - 0.015 14.9 2.5 0.03 14.0 1.7 1.4 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family zf-ribbon_3 PF13248.1 gi|21226696|ref|NP_632618.1| - 0.036 13.2 1.1 0.036 13.2 0.8 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|21226696|ref|NP_632618.1| - 0.54 10.2 2.4 1 9.3 1.6 1.4 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.7 gi|21226696|ref|NP_632618.1| - 7.4 5.9 9.3 24 4.3 6.4 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding Fcf1 PF04900.7 gi|21226697|ref|NP_632619.1| - 5.4e-07 29.6 0.0 7e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Fcf1 UPF0278 PF08745.6 gi|21226697|ref|NP_632619.1| - 8.9e-06 25.0 0.3 0.0037 16.5 0.0 2.1 1 1 0 2 2 2 2 UPF0278 family PIN PF01850.16 gi|21226697|ref|NP_632619.1| - 0.00015 22.0 0.2 0.25 11.6 0.0 2.1 1 1 1 2 2 2 2 PIN domain PIN_4 PF13638.1 gi|21226697|ref|NP_632619.1| - 0.0025 17.9 0.1 0.039 14.0 0.0 2.0 1 1 1 2 2 2 1 PIN domain DUF188 PF02639.9 gi|21226697|ref|NP_632619.1| - 0.046 13.1 0.0 0.059 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 XPG_I_2 PF12813.2 gi|21226697|ref|NP_632619.1| - 0.082 12.3 0.1 0.33 10.3 0.1 1.8 1 1 1 2 2 2 0 XPG domain containing RNase_Zc3h12a PF11977.3 gi|21226697|ref|NP_632619.1| - 0.11 12.2 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain SHS2_Rpb7-N PF03876.12 gi|21226698|ref|NP_632620.1| - 1.1e-20 73.4 0.2 3.2e-20 72.0 0.0 1.8 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|21226698|ref|NP_632620.1| - 1.6e-09 37.7 0.2 2.7e-09 36.9 0.2 1.4 1 0 0 1 1 1 1 S1 RNA binding domain Spt4 PF06093.8 gi|21226699|ref|NP_632621.1| - 2.4e-13 49.7 0.0 3e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger DZR PF12773.2 gi|21226699|ref|NP_632621.1| - 0.012 15.4 0.6 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|21226699|ref|NP_632621.1| - 0.026 13.8 0.4 0.06 12.6 0.0 1.7 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RING_5 PF14634.1 gi|21226699|ref|NP_632621.1| - 0.046 13.4 2.2 0.061 13.0 1.5 1.2 1 0 0 1 1 1 0 zinc-RING finger domain Rad50_zn_hook PF04423.9 gi|21226699|ref|NP_632621.1| - 0.079 12.4 1.8 0.59 9.6 1.3 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C3HC4_3 PF13920.1 gi|21226699|ref|NP_632621.1| - 0.081 12.6 1.9 0.12 12.1 1.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|21226699|ref|NP_632621.1| - 0.17 11.1 4.8 0.31 10.2 0.3 2.1 1 1 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|21226699|ref|NP_632621.1| - 0.67 9.9 5.0 1 9.3 0.2 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Prim_Zn_Ribbon PF08273.7 gi|21226699|ref|NP_632621.1| - 1.1 9.3 6.2 0.77 9.8 0.5 2.2 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase UPF0547 PF10571.4 gi|21226699|ref|NP_632621.1| - 1.3 8.8 4.4 3.7 7.3 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 YhfH PF14149.1 gi|21226699|ref|NP_632621.1| - 1.8 8.4 3.9 10 5.9 0.1 2.2 1 1 1 2 2 2 0 YhfH-like protein DUF2256 PF10013.4 gi|21226699|ref|NP_632621.1| - 2.1 8.1 6.4 1.8 8.3 0.4 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zinc_ribbon_2 PF13240.1 gi|21226699|ref|NP_632621.1| - 4.1 7.0 6.1 1.1 8.7 0.4 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DUF359 PF04019.7 gi|21226700|ref|NP_632622.1| - 1.4e-42 143.9 0.1 1.8e-42 143.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S24e PF01282.14 gi|21226701|ref|NP_632623.1| - 6.8e-30 102.7 0.2 8.5e-30 102.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e NADPH_Ox PF08414.5 gi|21226701|ref|NP_632623.1| - 0.086 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Respiratory burst NADPH oxidase Ribosomal_S27 PF01599.14 gi|21226702|ref|NP_632624.1| - 2.3e-21 75.3 2.1 2.6e-21 75.1 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.1 gi|21226702|ref|NP_632624.1| - 0.00034 20.2 3.8 0.01 15.5 3.2 2.3 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.14 gi|21226702|ref|NP_632624.1| - 0.0011 18.7 1.2 0.0012 18.5 0.9 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.2 gi|21226702|ref|NP_632624.1| - 0.0013 18.4 0.5 0.0017 18.1 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|21226702|ref|NP_632624.1| - 0.0027 17.3 2.8 0.35 10.5 0.0 2.1 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit GFA PF04828.9 gi|21226702|ref|NP_632624.1| - 0.0049 16.7 1.1 0.039 13.9 0.0 1.9 1 1 1 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme IBR PF01485.16 gi|21226702|ref|NP_632624.1| - 0.0087 15.9 0.2 0.0092 15.8 0.1 1.1 1 0 0 1 1 1 1 IBR domain zf-NADH-PPase PF09297.6 gi|21226702|ref|NP_632624.1| - 0.01 15.3 4.5 0.062 12.8 0.3 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|21226702|ref|NP_632624.1| - 0.022 14.0 1.2 0.032 13.5 0.8 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding Lar_restr_allev PF14354.1 gi|21226702|ref|NP_632624.1| - 0.035 14.3 1.0 0.053 13.8 0.7 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.1 gi|21226702|ref|NP_632624.1| - 0.036 13.2 4.3 0.52 9.5 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2082 PF09855.4 gi|21226702|ref|NP_632624.1| - 0.038 13.8 2.3 0.17 11.7 0.3 2.2 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HypA PF01155.14 gi|21226702|ref|NP_632624.1| - 0.058 13.0 0.3 0.061 13.0 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Auto_anti-p27 PF06677.7 gi|21226702|ref|NP_632624.1| - 0.061 13.0 1.2 0.089 12.5 0.9 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1451 PF07295.6 gi|21226702|ref|NP_632624.1| - 0.11 12.3 0.3 0.1 12.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) zinc_ribbon_2 PF13240.1 gi|21226702|ref|NP_632624.1| - 0.12 11.9 5.2 1.8 8.1 1.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|21226702|ref|NP_632624.1| - 0.13 11.9 0.9 0.19 11.3 0.6 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-HYPF PF07503.7 gi|21226702|ref|NP_632624.1| - 0.22 10.9 3.4 0.64 9.4 0.2 2.2 2 0 0 2 2 2 0 HypF finger NOB1_Zn_bind PF08772.6 gi|21226702|ref|NP_632624.1| - 0.32 10.8 6.1 0.25 11.1 0.5 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Zn_Tnp_IS1595 PF12760.2 gi|21226702|ref|NP_632624.1| - 0.66 9.8 4.5 2 8.2 3.1 1.8 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF2072 PF09845.4 gi|21226702|ref|NP_632624.1| - 0.69 9.8 2.8 1.1 9.2 0.0 1.9 1 1 1 2 2 2 0 Zn-ribbon containing protein (DUF2072) Zn-ribbon_8 PF09723.5 gi|21226702|ref|NP_632624.1| - 1.1 9.2 3.6 10 6.1 0.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF1936 PF09151.5 gi|21226702|ref|NP_632624.1| - 1.3 8.5 7.0 0.25 10.8 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1936) A2L_zn_ribbon PF08792.5 gi|21226702|ref|NP_632624.1| - 1.4 8.5 6.5 3.4 7.2 2.1 2.6 2 1 1 3 3 3 0 A2L zinc ribbon domain UPF0547 PF10571.4 gi|21226702|ref|NP_632624.1| - 3.3 7.4 6.0 4.1 7.1 1.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TPR_1 PF00515.23 gi|21226703|ref|NP_632625.1| - 2.4e-92 299.0 65.6 6e-08 31.9 0.1 21.1 21 1 0 21 21 21 16 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226703|ref|NP_632625.1| - 1.4e-90 290.0 71.4 8e-08 31.6 0.2 21.9 21 1 0 21 21 21 17 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226703|ref|NP_632625.1| - 3.1e-90 295.8 55.3 1.6e-12 46.8 0.4 14.0 8 1 7 16 16 16 14 TPR repeat TPR_16 PF13432.1 gi|21226703|ref|NP_632625.1| - 5.4e-72 237.1 43.8 7.1e-10 39.3 0.1 13.7 12 2 1 14 14 13 10 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226703|ref|NP_632625.1| - 7.2e-55 183.2 32.7 9.1e-10 38.7 0.0 12.2 10 2 2 13 13 12 10 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226703|ref|NP_632625.1| - 1.9e-53 174.2 38.6 0.00018 21.4 0.0 21.4 22 2 1 23 23 21 9 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226703|ref|NP_632625.1| - 6.6e-53 172.3 44.1 0.00014 22.2 0.0 19.9 7 5 13 20 20 20 12 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226703|ref|NP_632625.1| - 5.2e-51 170.4 50.7 3.4e-09 36.5 0.6 14.2 5 3 9 14 14 14 11 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226703|ref|NP_632625.1| - 4.1e-47 154.4 53.9 0.00066 19.2 0.0 20.3 21 2 1 22 22 20 11 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226703|ref|NP_632625.1| - 1.6e-35 118.0 38.6 0.0015 18.1 0.1 18.6 20 0 0 20 20 20 7 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226703|ref|NP_632625.1| - 3.5e-34 116.4 25.0 1.1e-05 25.1 0.0 12.5 7 2 5 14 14 14 11 Tetratricopeptide repeat Apc3 PF12895.2 gi|21226703|ref|NP_632625.1| - 1.7e-33 114.6 31.4 2.5e-05 24.3 1.7 11.0 5 3 8 13 13 12 10 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|21226703|ref|NP_632625.1| - 1.7e-24 84.5 41.9 0.037 14.5 0.1 16.8 19 0 0 19 19 15 5 Tetratricopeptide repeat NARP1 PF12569.3 gi|21226703|ref|NP_632625.1| - 2.8e-16 59.4 6.3 0.013 14.2 0.4 8.2 4 2 3 7 7 7 4 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|21226703|ref|NP_632625.1| - 4.9e-13 48.7 11.3 0.0061 15.6 0.0 7.4 3 2 3 7 7 6 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21226703|ref|NP_632625.1| - 6.9e-11 41.6 47.4 0.26 11.2 0.0 14.5 14 1 1 15 15 15 4 Tetratricopeptide repeat BTAD PF03704.12 gi|21226703|ref|NP_632625.1| - 5.3e-09 36.5 14.3 0.048 13.9 0.1 8.0 6 2 3 10 10 9 2 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|21226703|ref|NP_632625.1| - 6.8e-09 35.7 13.3 0.091 12.8 0.0 8.4 5 2 3 10 10 8 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21226703|ref|NP_632625.1| - 7.1e-09 35.4 34.6 0.23 11.3 0.0 13.3 14 1 2 16 16 15 1 Fis1 C-terminal tetratricopeptide repeat PPTA PF01239.17 gi|21226703|ref|NP_632625.1| - 5.1e-08 31.9 0.5 0.11 11.8 0.0 6.4 6 0 0 6 6 6 1 Protein prenyltransferase alpha subunit repeat RPN7 PF10602.4 gi|21226703|ref|NP_632625.1| - 2.4e-07 30.3 20.0 1.6 8.0 0.0 10.4 8 2 3 11 11 11 1 26S proteasome subunit RPN7 DUF3856 PF12968.2 gi|21226703|ref|NP_632625.1| - 2.4e-05 24.2 25.7 1.4 8.7 0.3 11.3 5 3 7 13 13 13 1 Domain of Unknown Function (DUF3856) Rapsyn_N PF10579.4 gi|21226703|ref|NP_632625.1| - 5e-05 23.0 0.4 0.79 9.5 0.0 5.6 6 0 0 6 6 5 1 Rapsyn N-terminal myristoylation and linker region TPR_21 PF09976.4 gi|21226703|ref|NP_632625.1| - 0.0019 18.1 19.9 0.78 9.6 0.0 7.3 9 1 0 9 9 6 2 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21226703|ref|NP_632625.1| - 0.12 12.1 32.1 5 7.0 0.0 9.8 11 0 0 11 11 9 0 Tetratricopeptide repeat PPR PF01535.15 gi|21226703|ref|NP_632625.1| - 0.18 11.8 31.7 1.8 8.7 0.0 12.0 14 0 0 14 14 12 0 PPR repeat TPR_4 PF07721.9 gi|21226703|ref|NP_632625.1| - 0.18 12.3 22.5 32 5.3 0.0 9.6 12 0 0 12 12 7 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21226703|ref|NP_632625.1| - 0.19 10.9 3.1 4.2 6.6 0.1 4.7 4 0 0 4 4 4 0 SHNi-TPR Coatomer_E PF04733.9 gi|21226703|ref|NP_632625.1| - 0.35 10.0 2.4 71 2.4 0.0 4.5 4 2 1 6 6 6 0 Coatomer epsilon subunit Peptidase_M22 PF00814.20 gi|21226704|ref|NP_632626.1| - 2e-88 296.3 0.1 2.5e-88 296.0 0.1 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.17 gi|21226704|ref|NP_632626.1| - 2.7e-08 33.4 0.0 4.9e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|21226704|ref|NP_632626.1| - 6e-08 32.7 0.2 0.00036 20.3 0.0 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.9 gi|21226704|ref|NP_632626.1| - 2.9e-06 26.5 0.0 9.1e-05 21.6 0.0 2.2 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.20 gi|21226704|ref|NP_632626.1| - 1.2e-05 24.6 0.1 2.1e-05 23.8 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain B12-binding PF02310.14 gi|21226704|ref|NP_632626.1| - 0.01 15.7 0.2 1.1 9.0 0.0 2.9 3 0 0 3 3 3 0 B12 binding domain CmcH_NodU PF02543.10 gi|21226704|ref|NP_632626.1| - 0.017 14.2 0.0 0.024 13.7 0.0 1.2 1 0 0 1 1 1 0 Carbamoyltransferase Pkinase_Tyr PF07714.12 gi|21226704|ref|NP_632626.1| - 0.036 13.1 0.0 0.062 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase WaaY PF06176.6 gi|21226704|ref|NP_632626.1| - 0.049 12.8 0.0 0.082 12.1 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Ham1p_like PF01725.11 gi|21226705|ref|NP_632627.1| - 2.1e-54 183.8 0.0 2.3e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 Ham1 family TatC PF00902.13 gi|21226707|ref|NP_632629.1| - 0.016 14.6 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) Cyclase PF04199.8 gi|21226708|ref|NP_632630.1| - 1.6e-25 89.7 0.0 2.1e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Fer4 PF00037.22 gi|21226709|ref|NP_632631.1| - 5.1e-11 41.6 15.5 6.8e-06 25.4 3.6 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226709|ref|NP_632631.1| - 8.8e-09 35.0 12.2 1.1e-08 34.7 8.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226709|ref|NP_632631.1| - 1.3e-08 34.3 15.7 0.00013 21.6 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21226709|ref|NP_632631.1| - 8.6e-08 32.8 12.0 8.6e-06 26.4 2.8 2.0 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|21226709|ref|NP_632631.1| - 2.9e-07 30.7 11.7 3.7e-07 30.4 8.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226709|ref|NP_632631.1| - 4.7e-07 29.9 12.8 7e-07 29.4 8.9 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226709|ref|NP_632631.1| - 1.3e-06 27.9 14.2 0.0019 18.0 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21226709|ref|NP_632631.1| - 9.4e-06 25.5 14.5 0.0033 17.6 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226709|ref|NP_632631.1| - 6.4e-05 22.8 13.2 0.00023 21.0 9.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226709|ref|NP_632631.1| - 0.00025 20.8 12.7 0.042 13.7 2.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21226709|ref|NP_632631.1| - 0.00037 20.8 16.1 0.0028 18.0 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21226709|ref|NP_632631.1| - 0.00078 19.7 13.9 0.82 10.0 9.6 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21226709|ref|NP_632631.1| - 0.0074 16.1 6.4 0.0086 15.9 4.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21226709|ref|NP_632631.1| - 0.39 11.1 11.0 0.32 11.4 0.5 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21226709|ref|NP_632631.1| - 0.46 10.9 17.2 0.21 12.0 4.0 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21226709|ref|NP_632631.1| - 1.9 9.1 15.3 0.75 10.3 2.3 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain UPF0167 PF03691.9 gi|21226709|ref|NP_632631.1| - 2.8 7.2 6.3 3.7 6.9 4.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) Radical_SAM PF04055.16 gi|21226710|ref|NP_632632.1| - 6.8e-10 39.3 0.2 6.9e-09 36.0 0.0 2.4 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21226710|ref|NP_632632.1| - 8.4e-05 22.5 0.0 0.00023 21.1 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21226710|ref|NP_632632.1| - 0.00013 22.1 0.0 0.00027 21.0 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF457 PF04307.9 gi|21226711|ref|NP_632633.1| - 2.1e-12 46.6 13.7 3.7e-12 45.8 9.5 1.4 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Hexapep PF00132.19 gi|21226712|ref|NP_632634.1| - 2.2e-10 39.5 12.6 2.2e-06 26.9 5.7 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21226712|ref|NP_632634.1| - 7.7e-06 25.3 15.0 0.00091 18.7 5.9 3.5 3 0 0 3 3 3 3 Hexapeptide repeat of succinyl-transferase DUF362 PF04015.7 gi|21226713|ref|NP_632635.1| - 2.8e-63 213.1 0.0 3.5e-63 212.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|21226713|ref|NP_632635.1| - 6.2e-09 35.0 14.4 3.4e-05 23.2 4.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21226713|ref|NP_632635.1| - 1.1e-06 28.1 14.9 0.0035 17.1 3.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226713|ref|NP_632635.1| - 1.8e-06 27.6 14.9 3.5e-06 26.7 10.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226713|ref|NP_632635.1| - 2e-05 24.8 15.3 4.7e-05 23.6 10.6 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226713|ref|NP_632635.1| - 9.3e-05 22.6 15.5 0.0002 21.5 10.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226713|ref|NP_632635.1| - 0.00012 21.9 14.8 0.00023 20.9 10.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226713|ref|NP_632635.1| - 0.00015 21.5 15.1 0.0009 19.0 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain DUF2088 PF09861.4 gi|21226713|ref|NP_632635.1| - 0.025 13.5 0.0 0.045 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2088) Fer4_15 PF13459.1 gi|21226713|ref|NP_632635.1| - 0.027 15.0 9.3 0.59 10.7 0.7 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|21226713|ref|NP_632635.1| - 0.034 14.8 12.7 0.65 10.7 1.7 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21226713|ref|NP_632635.1| - 0.042 13.8 14.8 0.32 11.0 3.9 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226713|ref|NP_632635.1| - 2.4 8.5 18.3 8.6 6.8 2.1 2.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain NAD_synthase PF02540.12 gi|21226714|ref|NP_632636.1| - 9.2e-56 188.4 0.1 2.6e-33 114.9 0.0 2.1 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.11 gi|21226714|ref|NP_632636.1| - 0.0026 16.4 0.0 0.0069 14.9 0.0 1.7 2 0 0 2 2 2 1 tRNA methyl transferase QueC PF06508.8 gi|21226714|ref|NP_632636.1| - 0.0045 16.2 0.0 0.17 11.1 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|21226715|ref|NP_632637.1| - 0.00045 18.8 0.2 0.0011 17.5 0.1 1.6 1 1 1 2 2 2 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|21226715|ref|NP_632637.1| - 0.005 15.7 0.0 0.0077 15.1 0.0 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|21226715|ref|NP_632637.1| - 0.019 14.2 0.0 0.041 13.1 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ATP_bind_4 PF01902.12 gi|21226715|ref|NP_632637.1| - 0.024 14.0 0.0 0.045 13.1 0.0 1.5 1 0 0 1 1 1 0 ATP-binding region Asn_synthase PF00733.16 gi|21226715|ref|NP_632637.1| - 0.029 13.8 0.0 0.047 13.1 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Cytomega_UL84 PF06284.6 gi|21226715|ref|NP_632637.1| - 0.064 11.6 0.0 0.088 11.2 0.0 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein ATP_bind_3 PF01171.15 gi|21226715|ref|NP_632637.1| - 0.12 11.8 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 PP-loop family AMP-binding PF00501.23 gi|21226716|ref|NP_632638.1| - 1.8e-72 244.0 0.0 2e-72 243.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|21226716|ref|NP_632638.1| - 5.2e-07 30.5 0.0 1e-06 29.5 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.20 gi|21226717|ref|NP_632639.1| - 3.6e-06 27.1 0.3 4.1e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site ACPS PF01648.15 gi|21226718|ref|NP_632640.1| - 0.0036 17.0 0.9 0.046 13.5 0.1 2.6 2 2 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily DUF2551 PF10826.3 gi|21226719|ref|NP_632641.1| - 5.7e-34 115.8 0.6 6.4e-34 115.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.14 gi|21226719|ref|NP_632641.1| - 0.043 13.7 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Ferric uptake regulator family Prenyltransf PF01255.14 gi|21226720|ref|NP_632642.1| - 4.8e-78 261.3 0.0 6.1e-78 260.9 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Glyoxal_oxid_N PF07250.6 gi|21226720|ref|NP_632642.1| - 0.12 11.4 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Glyoxal oxidase N-terminus Thioredox_DsbH PF03190.10 gi|21226721|ref|NP_632643.1| - 4.4e-76 254.1 0.1 7.8e-76 253.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.1 gi|21226721|ref|NP_632643.1| - 2.4e-12 46.6 0.0 4.7e-12 45.7 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like C5-epim_C PF06662.8 gi|21226721|ref|NP_632643.1| - 2e-05 23.9 0.9 0.0085 15.3 0.0 3.0 3 0 0 3 3 3 2 D-glucuronyl C5-epimerase C-terminus Thioredoxin_2 PF13098.1 gi|21226721|ref|NP_632643.1| - 0.00027 21.0 0.0 0.0008 19.5 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin-like domain Glyco_hydro_76 PF03663.9 gi|21226721|ref|NP_632643.1| - 0.00062 19.2 0.0 0.71 9.1 0.0 2.8 2 1 0 2 2 2 2 Glycosyl hydrolase family 76 Glyco_hydro_88 PF07470.8 gi|21226721|ref|NP_632643.1| - 0.0055 15.7 0.9 1.4 7.9 0.1 2.8 2 1 1 3 3 3 2 Glycosyl Hydrolase Family 88 LANC_like PF05147.8 gi|21226721|ref|NP_632643.1| - 0.01 14.4 0.4 0.48 8.9 0.0 3.0 3 0 0 3 3 3 0 Lanthionine synthetase C-like protein GlcNAc_2-epim PF07221.6 gi|21226721|ref|NP_632643.1| - 0.024 13.6 0.1 1.8 7.5 0.0 2.7 2 1 0 3 3 3 0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Pec_lyase PF09492.5 gi|21226721|ref|NP_632643.1| - 0.045 12.9 0.0 0.42 9.7 0.0 2.3 3 0 0 3 3 3 0 Pectic acid lyase cwf21 PF08312.7 gi|21226721|ref|NP_632643.1| - 3.5 7.5 7.0 0.13 12.1 0.3 2.2 2 0 0 2 2 2 0 cwf21 domain Cyt-b5 PF00173.23 gi|21226722|ref|NP_632644.1| - 4e-11 42.5 0.2 5e-11 42.2 0.1 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain YonK PF09642.5 gi|21226722|ref|NP_632644.1| - 0.07 12.8 0.2 0.12 12.0 0.2 1.5 1 0 0 1 1 1 0 YonK protein Pyridox_oxidase PF01243.15 gi|21226723|ref|NP_632645.1| - 1.8e-15 56.7 0.0 6.9e-15 54.8 0.0 1.8 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.1 gi|21226723|ref|NP_632645.1| - 2.5e-08 33.8 0.0 3e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|21226723|ref|NP_632645.1| - 0.0015 18.3 0.0 0.0022 17.8 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HTH_29 PF13551.1 gi|21226724|ref|NP_632646.1| - 1.2e-13 51.1 0.0 2.2e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21226724|ref|NP_632646.1| - 2.5e-11 44.2 0.1 6.3e-11 42.9 0.0 1.7 2 0 0 2 2 2 1 Homeodomain-like domain HTH_33 PF13592.1 gi|21226724|ref|NP_632646.1| - 3.6e-10 39.2 0.0 1.2e-09 37.5 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.1 gi|21226724|ref|NP_632646.1| - 2.8e-08 33.6 0.5 1.3e-07 31.4 0.3 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|21226724|ref|NP_632646.1| - 2.2e-07 30.3 0.1 4.8e-07 29.2 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain LZ_Tnp_IS481 PF13011.1 gi|21226724|ref|NP_632646.1| - 0.0002 21.6 0.0 0.00031 21.0 0.0 1.3 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 DDE_3 PF13358.1 gi|21226725|ref|NP_632647.1| - 6.2e-19 68.1 0.1 8.4e-19 67.7 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.14 gi|21226725|ref|NP_632647.1| - 1.8e-05 24.0 0.6 6.7e-05 22.1 0.4 1.8 1 1 0 1 1 1 1 DDE superfamily endonuclease rve PF00665.21 gi|21226725|ref|NP_632647.1| - 0.0012 18.9 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain DUF1462 PF07315.6 gi|21226725|ref|NP_632647.1| - 0.054 13.4 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1462) DUF3718 PF12514.3 gi|21226725|ref|NP_632647.1| - 0.074 13.1 0.1 0.86 9.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3718) AAA_18 PF13238.1 gi|21226727|ref|NP_632649.1| - 6.6e-27 94.3 4.0 1.8e-26 92.9 2.3 1.8 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|21226727|ref|NP_632649.1| - 1.1e-16 61.7 1.4 1.5e-16 61.2 0.8 1.4 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|21226727|ref|NP_632649.1| - 2.5e-05 24.3 0.4 5e-05 23.3 0.2 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|21226727|ref|NP_632649.1| - 3.6e-05 23.6 0.0 0.00027 20.8 0.0 2.1 1 1 0 1 1 1 1 AAA domain CoaE PF01121.15 gi|21226727|ref|NP_632649.1| - 0.00068 19.0 0.0 0.045 13.1 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase SKI PF01202.17 gi|21226727|ref|NP_632649.1| - 0.0027 17.5 0.2 0.11 12.3 0.1 2.3 1 1 0 1 1 1 1 Shikimate kinase MobB PF03205.9 gi|21226727|ref|NP_632649.1| - 0.0035 17.0 0.5 0.16 11.6 0.1 2.3 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.9 gi|21226727|ref|NP_632649.1| - 0.0044 16.7 0.2 0.0095 15.6 0.1 1.9 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.7 gi|21226727|ref|NP_632649.1| - 0.0059 15.7 0.0 0.011 14.8 0.0 1.7 1 1 0 1 1 1 1 Zeta toxin PRK PF00485.13 gi|21226727|ref|NP_632649.1| - 0.012 15.2 0.1 0.084 12.4 0.0 2.2 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family dNK PF01712.14 gi|21226727|ref|NP_632649.1| - 0.012 15.4 0.2 0.02 14.7 0.1 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA PF00004.24 gi|21226727|ref|NP_632649.1| - 0.016 15.4 0.1 0.035 14.3 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) KTI12 PF08433.5 gi|21226727|ref|NP_632649.1| - 0.017 14.3 0.1 0.034 13.3 0.0 1.5 1 1 0 1 1 1 0 Chromatin associated protein KTI12 AAA_22 PF13401.1 gi|21226727|ref|NP_632649.1| - 0.06 13.4 0.4 0.1 12.7 0.3 1.7 1 1 0 1 1 1 0 AAA domain UPF0180 PF03698.8 gi|21226727|ref|NP_632649.1| - 0.097 12.5 0.4 5.1 7.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0180) ADK PF00406.17 gi|21226727|ref|NP_632649.1| - 0.1 12.4 0.2 0.33 10.8 0.1 1.9 1 1 0 1 1 1 0 Adenylate kinase AAA_19 PF13245.1 gi|21226727|ref|NP_632649.1| - 0.11 12.2 0.8 0.24 11.1 0.3 1.7 2 0 0 2 2 1 0 Part of AAA domain KAP_NTPase PF07693.9 gi|21226727|ref|NP_632649.1| - 0.11 11.4 0.1 0.21 10.5 0.1 1.5 1 1 0 1 1 1 0 KAP family P-loop domain ArgK PF03308.11 gi|21226727|ref|NP_632649.1| - 0.11 11.2 0.9 0.17 10.6 0.1 1.7 2 1 0 2 2 2 0 ArgK protein DUF3213 PF11491.3 gi|21226727|ref|NP_632649.1| - 0.73 9.7 4.5 1.6 8.6 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3213) CTP_transf_2 PF01467.21 gi|21226728|ref|NP_632650.1| - 1.2e-15 57.9 0.2 1.7e-15 57.4 0.1 1.2 1 0 0 1 1 1 1 Cytidylyltransferase FrhB_FdhB_C PF04432.8 gi|21226729|ref|NP_632651.1| - 1.6e-44 151.1 0.1 3.1e-44 150.2 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|21226729|ref|NP_632651.1| - 5e-18 64.7 0.0 8.5e-18 63.9 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|21226729|ref|NP_632651.1| - 1.3e-05 24.5 17.8 0.00038 19.9 4.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21226729|ref|NP_632651.1| - 2e-05 24.5 5.3 2e-05 24.5 3.7 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21226729|ref|NP_632651.1| - 2.6e-05 23.9 9.4 2.6e-05 23.9 6.5 2.1 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226729|ref|NP_632651.1| - 3.9e-05 23.9 23.4 0.00047 20.4 8.3 2.5 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226729|ref|NP_632651.1| - 0.00023 21.3 8.4 0.00023 21.3 5.8 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21226729|ref|NP_632651.1| - 0.0012 19.1 6.5 0.0012 19.1 4.5 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226729|ref|NP_632651.1| - 0.0016 18.2 15.8 0.043 13.7 3.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21226729|ref|NP_632651.1| - 0.0031 18.2 9.6 0.021 15.5 6.6 2.4 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21226729|ref|NP_632651.1| - 0.0041 16.9 14.7 0.0041 16.9 10.2 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21226729|ref|NP_632651.1| - 0.022 15.0 2.1 0.022 15.0 1.4 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226729|ref|NP_632651.1| - 0.028 14.2 5.2 0.028 14.2 3.6 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21226729|ref|NP_632651.1| - 0.056 14.0 6.0 1.7 9.3 0.9 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF2442 PF10387.4 gi|21226729|ref|NP_632651.1| - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) Fer4_13 PF13370.1 gi|21226729|ref|NP_632651.1| - 8.6 6.8 13.1 18 5.8 3.7 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain Bac_luciferase PF00296.15 gi|21226730|ref|NP_632652.1| - 2e-66 224.2 0.0 2.2e-66 224.0 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF2180 PF09947.4 gi|21226731|ref|NP_632653.1| - 2.3e-33 113.7 7.0 2.7e-33 113.5 4.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) FYVE PF01363.16 gi|21226731|ref|NP_632653.1| - 0.017 14.9 2.2 0.027 14.3 1.5 1.4 1 1 0 1 1 1 0 FYVE zinc finger Cytochrom_c3_2 PF14537.1 gi|21226731|ref|NP_632653.1| - 0.84 10.0 3.9 1.7 9.0 2.7 1.6 1 1 0 1 1 1 0 Cytochrome c3 Nudix_N_2 PF14803.1 gi|21226731|ref|NP_632653.1| - 0.97 9.1 0.1 0.97 9.1 0.0 2.5 3 0 0 3 3 3 0 Nudix N-terminal DZR PF12773.2 gi|21226731|ref|NP_632653.1| - 2.5 7.9 7.3 28 4.6 5.0 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF2180 PF09947.4 gi|21226732|ref|NP_632654.1| - 1e-30 105.2 5.7 1.2e-30 105.0 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) FYVE PF01363.16 gi|21226732|ref|NP_632654.1| - 0.016 15.0 2.2 0.032 14.1 1.5 1.5 1 1 0 1 1 1 0 FYVE zinc finger zf-UBR PF02207.15 gi|21226732|ref|NP_632654.1| - 0.036 13.7 1.7 0.18 11.5 0.4 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Tnp_zf-ribbon_2 PF13842.1 gi|21226732|ref|NP_632654.1| - 0.22 11.9 4.9 0.26 11.7 1.0 2.3 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon DZR PF12773.2 gi|21226732|ref|NP_632654.1| - 0.46 10.3 3.5 1.6 8.6 2.5 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf-AD PF07776.10 gi|21226732|ref|NP_632654.1| - 0.87 9.6 0.0 0.87 9.6 0.0 2.4 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) zf-RING_5 PF14634.1 gi|21226732|ref|NP_632654.1| - 0.94 9.2 7.1 0.72 9.6 0.9 2.3 2 0 0 2 2 2 0 zinc-RING finger domain zf-C3HC4_2 PF13923.1 gi|21226732|ref|NP_632654.1| - 1.6 8.7 8.8 4.6 7.3 1.9 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) CMD PF02627.15 gi|21226733|ref|NP_632655.1| - 1.3e-18 66.6 0.1 1.5e-18 66.3 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Desulfoferrodox PF01880.13 gi|21226734|ref|NP_632656.1| - 3.2e-29 101.0 0.9 6.7e-29 100.0 0.6 1.5 1 1 0 1 1 1 1 Desulfoferrodoxin Oxysterol_BP PF01237.13 gi|21226734|ref|NP_632656.1| - 0.11 11.0 0.1 0.12 10.8 0.1 1.1 1 0 0 1 1 1 0 Oxysterol-binding protein Cytochrome_C554 PF13435.1 gi|21226735|ref|NP_632657.1| - 1.9e-14 53.8 2.3 1.1e-10 41.7 0.2 2.3 1 1 1 2 2 2 2 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.1 gi|21226735|ref|NP_632657.1| - 1.9e-08 33.8 6.0 0.0059 16.2 0.9 3.5 1 1 1 2 2 2 2 Cytochrome c7 C1_1 PF00130.17 gi|21226735|ref|NP_632657.1| - 0.00016 21.3 4.1 0.097 12.4 0.0 3.6 3 1 0 3 3 3 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrom_NNT PF03264.9 gi|21226735|ref|NP_632657.1| - 0.0002 20.8 7.2 0.23 10.8 0.1 3.2 2 1 1 3 3 3 2 NapC/NirT cytochrome c family, N-terminal region Cytochrom_c3_2 PF14537.1 gi|21226735|ref|NP_632657.1| - 0.0005 20.3 9.5 6.3 7.2 0.2 3.8 1 1 1 2 2 2 1 Cytochrome c3 DUF2296 PF10058.4 gi|21226735|ref|NP_632657.1| - 0.068 12.9 0.4 32 4.3 0.0 3.4 3 0 0 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) Cytochrome_CBB3 PF13442.1 gi|21226735|ref|NP_632657.1| - 0.082 13.0 17.4 2.9 8.1 0.0 5.0 2 2 3 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III DZR PF12773.2 gi|21226735|ref|NP_632657.1| - 0.11 12.3 5.0 7.8 6.4 0.1 3.3 3 0 0 3 3 3 0 Double zinc ribbon zf-BED PF02892.10 gi|21226735|ref|NP_632657.1| - 0.12 12.1 1.0 17 5.2 0.0 3.1 3 0 0 3 3 3 0 BED zinc finger Paired_CXXCH_1 PF09699.5 gi|21226735|ref|NP_632657.1| - 0.33 10.4 16.8 23 4.6 0.1 5.0 3 2 2 5 5 5 0 Doubled CXXCH motif (Paired_CXXCH_1) GFA PF04828.9 gi|21226735|ref|NP_632657.1| - 0.43 10.5 4.2 0.47 10.4 0.1 3.0 2 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme FMN_red PF03358.10 gi|21226736|ref|NP_632658.1| - 1.2e-30 106.0 0.0 1.6e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21226736|ref|NP_632658.1| - 1e-05 25.1 0.0 1.8e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin-like fold Flavoprotein PF02441.14 gi|21226737|ref|NP_632659.1| - 9.2e-20 70.6 0.0 1.3e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Rubrerythrin PF02915.12 gi|21226738|ref|NP_632660.1| - 2.7e-12 47.1 8.8 4.6e-12 46.4 6.1 1.4 1 1 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.5 gi|21226738|ref|NP_632660.1| - 1.6e-05 25.1 5.0 0.016 15.4 0.4 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF2383) Ferritin_2 PF13668.1 gi|21226738|ref|NP_632660.1| - 2.1e-05 24.4 1.4 0.1 12.5 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain Ferritin PF00210.19 gi|21226738|ref|NP_632660.1| - 0.00016 21.3 6.0 0.00048 19.8 4.1 1.7 1 1 1 2 2 2 2 Ferritin-like domain DUF2202 PF09968.4 gi|21226738|ref|NP_632660.1| - 0.00043 19.9 1.6 0.31 10.7 0.0 2.1 2 0 0 2 2 2 2 Uncharacterized protein domain (DUF2202) COQ7 PF03232.8 gi|21226738|ref|NP_632660.1| - 0.02 14.3 1.7 0.036 13.5 0.2 1.9 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 FadR_C PF07840.7 gi|21226738|ref|NP_632660.1| - 0.23 11.1 2.0 0.38 10.3 0.2 1.9 2 0 0 2 2 2 0 FadR C-terminal domain OmdA PF13376.1 gi|21226738|ref|NP_632660.1| - 2 8.1 7.0 7.6 6.2 0.5 3.4 2 2 2 4 4 4 0 Bacteriocin-protection, YdeI or OmpD-Associated Lactamase_B PF00753.22 gi|21226740|ref|NP_632662.1| - 7e-06 25.8 0.0 7.3e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily AAL_decarboxy PF03306.8 gi|21226741|ref|NP_632663.1| - 2.3e-87 291.6 0.0 3e-87 291.2 0.0 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase ANTH PF07651.11 gi|21226742|ref|NP_632664.1| - 0.047 12.4 0.1 0.048 12.3 0.1 1.1 1 0 0 1 1 1 0 ANTH domain Iso_dh PF00180.15 gi|21226744|ref|NP_632666.1| - 1.3e-95 320.3 0.0 1.5e-95 320.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF204 PF02659.10 gi|21226745|ref|NP_632667.1| - 7.4e-39 131.7 19.0 4.5e-21 74.7 3.8 2.1 2 0 0 2 2 2 2 Domain of unknown function DUF DUF373 PF04123.8 gi|21226745|ref|NP_632667.1| - 0.0045 16.0 0.5 0.0051 15.8 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF373) Aconitase_C PF00694.14 gi|21226747|ref|NP_632669.1| - 4.1e-21 75.4 0.0 6.5e-21 74.7 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|21226747|ref|NP_632669.1| - 1.2e-05 24.8 0.0 0.0014 18.1 0.0 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus WSK PF03832.8 gi|21226747|ref|NP_632669.1| - 0.061 12.6 0.4 0.11 11.8 0.3 1.4 1 0 0 1 1 1 0 WSK motif STT3 PF02516.9 gi|21226748|ref|NP_632670.1| - 3.8e-35 121.7 38.8 3e-33 115.5 26.9 2.2 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit STT3 PF02516.9 gi|21226749|ref|NP_632671.1| - 4.2e-30 105.1 41.2 2.7e-29 102.4 28.5 2.3 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit YwiC PF14256.1 gi|21226749|ref|NP_632671.1| - 2.4 8.2 17.8 0.48 10.5 2.6 3.3 3 1 1 4 4 4 0 YwiC-like protein Glycos_transf_1 PF00534.15 gi|21226750|ref|NP_632672.1| - 5.8e-21 74.6 0.0 9.7e-21 73.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21226750|ref|NP_632672.1| - 2.4e-09 37.4 0.0 6e-09 36.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21226750|ref|NP_632672.1| - 5.5e-09 36.3 0.0 3.2e-08 33.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|21226750|ref|NP_632672.1| - 1.1e-06 28.4 0.0 2.6e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|21226750|ref|NP_632672.1| - 9.2e-06 25.5 0.1 1.8e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_1 PF00534.15 gi|21226751|ref|NP_632673.1| - 3.2e-30 104.7 0.3 5.9e-30 103.9 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21226751|ref|NP_632673.1| - 1.2e-24 87.0 0.2 1.7e-24 86.4 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21226751|ref|NP_632673.1| - 5.3e-23 81.9 0.0 1.1e-22 80.8 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|21226751|ref|NP_632673.1| - 1.2e-14 54.5 0.0 6.1e-14 52.3 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21226751|ref|NP_632673.1| - 1.9e-12 47.1 0.3 3.8e-12 46.2 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.6 gi|21226751|ref|NP_632673.1| - 5.3e-05 22.8 0.7 0.028 13.9 0.0 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.1 gi|21226751|ref|NP_632673.1| - 0.0033 17.6 0.1 0.013 15.7 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 DUF2325 PF10087.4 gi|21226751|ref|NP_632673.1| - 0.076 12.8 0.0 1 9.2 0.0 2.7 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) Glycos_transf_1 PF00534.15 gi|21226752|ref|NP_632674.1| - 1.7e-41 141.5 0.3 3e-41 140.7 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21226752|ref|NP_632674.1| - 9.7e-17 61.3 0.0 1.6e-16 60.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21226752|ref|NP_632674.1| - 2.3e-11 43.8 0.0 7.9e-11 42.0 0.0 1.9 3 0 0 3 3 3 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21226752|ref|NP_632674.1| - 1.6e-09 37.6 0.3 1.1e-08 34.9 0.1 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_transf_20 PF00982.16 gi|21226752|ref|NP_632674.1| - 2.5e-05 22.9 0.1 5.4e-05 21.8 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase family 20 Glycogen_syn PF05693.8 gi|21226752|ref|NP_632674.1| - 0.028 12.6 0.0 0.053 11.7 0.0 1.4 1 0 0 1 1 1 0 Glycogen synthase Glycos_transf_2 PF00535.21 gi|21226753|ref|NP_632675.1| - 3.1e-21 75.7 1.3 1.3e-09 37.9 0.1 2.6 3 0 0 3 3 3 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21226753|ref|NP_632675.1| - 2.5e-11 43.8 0.0 6.1e-05 22.9 0.0 2.5 1 1 1 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|21226753|ref|NP_632675.1| - 4.2e-06 26.1 0.0 2.9e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase like family Glyco_trans_2_3 PF13632.1 gi|21226753|ref|NP_632675.1| - 0.00012 21.8 0.0 0.00024 20.8 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.21 gi|21226754|ref|NP_632676.1| - 5.4e-43 146.6 0.3 8.6e-43 145.9 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|21226754|ref|NP_632676.1| - 8.5e-23 80.8 0.2 1.4e-22 80.1 0.1 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|21226754|ref|NP_632676.1| - 2.9e-22 79.6 0.0 3.9e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21226754|ref|NP_632676.1| - 4.2e-06 26.9 0.1 7.8e-06 26.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 GNT-I PF03071.10 gi|21226754|ref|NP_632676.1| - 0.013 14.1 0.0 0.017 13.6 0.0 1.2 1 0 0 1 1 1 0 GNT-I family Glycos_transf_2 PF00535.21 gi|21226755|ref|NP_632677.1| - 3.1e-29 101.8 4.4 4.6e-29 101.2 3.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21226755|ref|NP_632677.1| - 2e-11 44.1 0.0 2.8e-11 43.6 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|21226755|ref|NP_632677.1| - 7.1e-08 31.8 4.2 1e-07 31.3 2.9 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|21226755|ref|NP_632677.1| - 1.2e-05 24.7 6.1 3.3e-05 23.2 0.4 2.3 1 1 1 2 2 2 2 Glycosyltransferase like family MULE PF10551.4 gi|21226755|ref|NP_632677.1| - 0.042 14.0 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 MULE transposase domain Glycos_transf_1 PF00534.15 gi|21226756|ref|NP_632678.1| - 2.3e-28 98.7 0.0 4.2e-28 97.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21226756|ref|NP_632678.1| - 5.4e-11 42.7 0.0 8.1e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21226756|ref|NP_632678.1| - 2e-10 40.6 0.3 2.3e-08 33.9 0.0 2.5 3 0 0 3 3 3 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|21226756|ref|NP_632678.1| - 1.2e-06 28.6 0.0 2.3e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21226756|ref|NP_632678.1| - 8.4e-05 22.7 0.0 0.00024 21.2 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain ABC_tran PF00005.22 gi|21226758|ref|NP_632680.1| - 2.7e-22 79.5 0.0 5.3e-22 78.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter Wzt_C PF14524.1 gi|21226758|ref|NP_632680.1| - 1.8e-13 50.4 0.7 3.3e-13 49.5 0.5 1.5 1 0 0 1 1 1 1 Wzt C-terminal domain AAA_21 PF13304.1 gi|21226758|ref|NP_632680.1| - 1e-08 35.5 7.8 9.8e-05 22.4 0.2 3.2 2 1 1 3 3 3 2 AAA domain AAA_29 PF13555.1 gi|21226758|ref|NP_632680.1| - 0.00059 19.3 0.0 0.0015 18.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|21226758|ref|NP_632680.1| - 0.00061 20.1 4.8 0.0095 16.2 0.3 2.7 2 1 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|21226758|ref|NP_632680.1| - 0.0043 16.9 0.0 0.01 15.7 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF258 PF03193.11 gi|21226758|ref|NP_632680.1| - 0.0045 16.1 0.3 0.015 14.4 0.0 1.9 2 1 0 2 2 2 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|21226758|ref|NP_632680.1| - 0.064 14.0 0.4 0.18 12.6 0.2 1.7 1 1 0 1 1 1 0 AAA domain ArgK PF03308.11 gi|21226758|ref|NP_632680.1| - 0.079 11.7 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 ArgK protein ABC2_membrane PF01061.19 gi|21226759|ref|NP_632681.1| - 1.4e-28 99.5 23.5 1.4e-28 99.5 16.3 2.0 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21226759|ref|NP_632681.1| - 0.0026 16.8 21.5 0.0026 16.8 14.9 2.0 1 1 0 2 2 2 1 ABC-2 family transporter protein PepSY_TM PF03929.11 gi|21226759|ref|NP_632681.1| - 0.57 10.6 17.2 0.49 10.8 1.4 4.5 3 0 0 3 3 3 0 PepSY-associated TM helix Epimerase PF01370.16 gi|21226760|ref|NP_632682.1| - 3.5e-76 255.7 0.0 4.1e-76 255.5 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|21226760|ref|NP_632682.1| - 1.9e-09 36.8 0.0 5.2e-09 35.4 0.0 1.7 1 1 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.10 gi|21226760|ref|NP_632682.1| - 1.9e-06 26.9 0.0 0.00011 21.2 0.0 2.3 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|21226760|ref|NP_632682.1| - 0.0034 17.4 0.0 0.0058 16.6 0.0 1.5 1 1 0 1 1 1 1 NADH(P)-binding Epimerase PF01370.16 gi|21226761|ref|NP_632683.1| - 5.9e-72 241.9 0.1 7.2e-72 241.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|21226761|ref|NP_632683.1| - 1.3e-08 34.0 0.0 2.2e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase_Csub PF13950.1 gi|21226761|ref|NP_632683.1| - 0.00013 21.8 0.0 0.00027 20.8 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit Polysacc_synt_2 PF02719.10 gi|21226761|ref|NP_632683.1| - 0.00017 20.6 0.0 0.00027 19.9 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein adh_short PF00106.20 gi|21226761|ref|NP_632683.1| - 0.016 15.1 0.0 0.028 14.3 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase MannoseP_isomer PF01050.13 gi|21226762|ref|NP_632684.1| - 4.2e-54 182.2 0.0 6.4e-54 181.6 0.0 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.18 gi|21226762|ref|NP_632684.1| - 3.6e-40 137.8 0.0 6.8e-40 136.9 0.0 1.5 1 1 0 1 1 1 1 Nucleotidyl transferase Cupin_2 PF07883.6 gi|21226762|ref|NP_632684.1| - 6e-11 41.6 0.0 1.1e-10 40.8 0.0 1.4 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|21226762|ref|NP_632684.1| - 0.013 15.1 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_6 PF12852.2 gi|21226762|ref|NP_632684.1| - 0.014 15.0 0.0 0.026 14.1 0.0 1.4 1 0 0 1 1 1 0 Cupin Methyltransf_31 PF13847.1 gi|21226763|ref|NP_632685.1| - 1.7e-41 141.3 0.0 2.4e-41 140.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226763|ref|NP_632685.1| - 1.3e-23 83.3 0.0 2.9e-23 82.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226763|ref|NP_632685.1| - 7e-21 74.4 0.0 1.1e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|21226763|ref|NP_632685.1| - 1.3e-16 61.1 0.6 2.1e-16 60.5 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226763|ref|NP_632685.1| - 2.8e-16 59.7 0.1 7.2e-16 58.3 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226763|ref|NP_632685.1| - 2.3e-15 56.6 0.0 3.1e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21226763|ref|NP_632685.1| - 2.5e-12 46.8 0.0 3.8e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|21226763|ref|NP_632685.1| - 3e-12 46.5 0.0 5.2e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21226763|ref|NP_632685.1| - 1.8e-11 44.3 0.0 3.1e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21226763|ref|NP_632685.1| - 4.3e-09 35.9 0.0 7.1e-09 35.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.10 gi|21226763|ref|NP_632685.1| - 6.5e-08 32.4 0.3 2.9e-07 30.3 0.2 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase UPF0020 PF01170.13 gi|21226763|ref|NP_632685.1| - 2.3e-07 30.5 0.0 4e-07 29.7 0.0 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|21226763|ref|NP_632685.1| - 6e-06 25.5 0.0 8.6e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|21226763|ref|NP_632685.1| - 2.5e-05 23.9 0.0 4.2e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|21226763|ref|NP_632685.1| - 9.3e-05 22.0 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.15 gi|21226763|ref|NP_632685.1| - 0.00055 19.0 0.0 0.0008 18.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.12 gi|21226763|ref|NP_632685.1| - 0.00066 18.7 0.0 0.0027 16.7 0.0 1.8 1 1 0 2 2 2 1 Putative methyltransferase Methyltransf_3 PF01596.12 gi|21226763|ref|NP_632685.1| - 0.0055 15.7 0.0 0.008 15.2 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase FtsJ PF01728.14 gi|21226763|ref|NP_632685.1| - 0.0095 15.9 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Met_10 PF02475.11 gi|21226763|ref|NP_632685.1| - 0.024 14.2 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein DOT1 PF08123.8 gi|21226763|ref|NP_632685.1| - 0.054 12.8 0.1 0.084 12.1 0.1 1.4 1 1 0 1 1 1 0 Histone methylation protein DOT1 GidB PF02527.10 gi|21226763|ref|NP_632685.1| - 0.097 11.8 0.1 0.21 10.6 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_24 PF13578.1 gi|21226763|ref|NP_632685.1| - 0.098 13.4 0.0 0.16 12.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain HTH_5 PF01022.15 gi|21226764|ref|NP_632686.1| - 1.9e-13 49.8 0.2 3.1e-13 49.1 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21226764|ref|NP_632686.1| - 1.2e-11 44.1 0.0 1.8e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|21226764|ref|NP_632686.1| - 0.0027 17.7 0.2 0.0051 16.8 0.1 1.5 1 1 0 1 1 1 1 Penicillinase repressor HTH_34 PF13601.1 gi|21226764|ref|NP_632686.1| - 0.003 17.5 0.1 0.0046 16.9 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|21226764|ref|NP_632686.1| - 0.029 14.5 0.2 0.055 13.6 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|21226764|ref|NP_632686.1| - 0.083 12.2 0.0 8.7 5.8 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding NAD_binding_1 PF00175.16 gi|21226765|ref|NP_632687.1| - 2.6e-18 66.5 0.0 5.2e-18 65.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|21226765|ref|NP_632687.1| - 2.1e-12 46.3 3.7 4.1e-12 45.3 2.6 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|21226765|ref|NP_632687.1| - 5.5e-05 23.2 0.0 9.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cpn10 PF00166.16 gi|21226765|ref|NP_632687.1| - 0.008 16.0 1.1 0.066 13.1 0.0 2.5 1 1 1 2 2 2 1 Chaperonin 10 Kd subunit Pept_tRNA_hydro PF01195.14 gi|21226765|ref|NP_632687.1| - 0.043 13.2 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase NAD_binding_6 PF08030.7 gi|21226765|ref|NP_632687.1| - 0.075 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer4_20 PF14691.1 gi|21226766|ref|NP_632688.1| - 9.6e-45 150.7 6.1 1.5e-44 150.1 4.2 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.9 gi|21226766|ref|NP_632688.1| - 3.7e-20 72.6 4.7 1.6e-10 41.1 0.3 4.5 1 1 2 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|21226766|ref|NP_632688.1| - 4.5e-17 62.2 3.9 3.9e-08 33.5 0.2 3.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21226766|ref|NP_632688.1| - 2e-14 54.1 0.2 1.4e-05 25.2 0.0 3.2 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.1 gi|21226766|ref|NP_632688.1| - 1.2e-08 35.1 0.3 0.0015 18.7 0.1 2.7 2 1 0 2 2 2 2 Putative NAD(P)-binding NAD_binding_8 PF13450.1 gi|21226766|ref|NP_632688.1| - 1.6e-08 34.4 1.4 2.8e-08 33.6 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.16 gi|21226766|ref|NP_632688.1| - 2.9e-07 30.2 9.7 0.0025 17.3 0.0 3.4 4 0 0 4 4 3 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.12 gi|21226766|ref|NP_632688.1| - 4.5e-07 29.1 0.1 5.9e-06 25.5 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.2 gi|21226766|ref|NP_632688.1| - 4.7e-07 29.2 2.7 0.00011 21.4 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21226766|ref|NP_632688.1| - 6.6e-06 25.2 1.2 6.6e-06 25.2 0.8 2.9 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.9 gi|21226766|ref|NP_632688.1| - 2.7e-05 22.8 0.4 2.7e-05 22.8 0.3 2.0 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.17 gi|21226766|ref|NP_632688.1| - 2.7e-05 23.2 3.2 0.0004 19.3 0.0 2.8 3 0 0 3 3 3 1 Glucose inhibited division protein A DAO PF01266.19 gi|21226766|ref|NP_632688.1| - 4.5e-05 22.5 4.8 8.1e-05 21.6 0.1 2.8 3 1 0 3 3 3 1 FAD dependent oxidoreductase Shikimate_DH PF01488.15 gi|21226766|ref|NP_632688.1| - 8.2e-05 22.7 0.7 0.21 11.7 0.0 3.9 5 0 0 5 5 4 1 Shikimate / quinate 5-dehydrogenase ELFV_dehydrog PF00208.16 gi|21226766|ref|NP_632688.1| - 0.00011 21.8 0.1 0.13 11.8 0.0 2.2 2 0 0 2 2 2 2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FAD_binding_3 PF01494.14 gi|21226766|ref|NP_632688.1| - 0.00031 19.9 0.7 0.0012 18.0 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain 2-Hacid_dh_C PF02826.14 gi|21226766|ref|NP_632688.1| - 0.0007 18.7 0.0 0.94 8.6 0.0 2.6 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|21226766|ref|NP_632688.1| - 0.0011 19.4 0.5 1 9.8 0.0 3.1 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent FMO-like PF00743.14 gi|21226766|ref|NP_632688.1| - 0.0011 17.2 0.0 0.3 9.2 0.0 2.3 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Oxidored_nitro PF00148.14 gi|21226766|ref|NP_632688.1| - 0.0012 17.5 2.0 0.35 9.4 0.0 2.5 2 1 1 3 3 3 2 Nitrogenase component 1 type Oxidoreductase UDPG_MGDP_dh_N PF03721.9 gi|21226766|ref|NP_632688.1| - 0.0016 17.8 0.1 0.0075 15.6 0.1 2.1 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ-1_PfpI PF01965.19 gi|21226766|ref|NP_632688.1| - 0.0026 17.2 0.2 0.14 11.5 0.0 2.8 3 0 0 3 3 2 1 DJ-1/PfpI family NAD_Gly3P_dh_N PF01210.18 gi|21226766|ref|NP_632688.1| - 0.0056 16.4 0.4 0.091 12.4 0.1 2.5 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.19 gi|21226766|ref|NP_632688.1| - 0.0058 15.7 0.1 0.0058 15.7 0.1 1.8 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase CPSase_L_chain PF00289.17 gi|21226766|ref|NP_632688.1| - 0.0093 16.0 0.2 3.9 7.6 0.0 2.8 3 0 0 3 3 2 1 Carbamoyl-phosphate synthase L chain, N-terminal domain NAD_binding_9 PF13454.1 gi|21226766|ref|NP_632688.1| - 0.016 14.9 0.2 0.068 12.9 0.1 2.1 3 0 0 3 3 2 0 FAD-NAD(P)-binding NAD_binding_10 PF13460.1 gi|21226766|ref|NP_632688.1| - 0.017 15.1 4.3 9 6.2 0.1 4.3 4 1 1 5 5 5 0 NADH(P)-binding PALP PF00291.20 gi|21226766|ref|NP_632688.1| - 0.021 14.0 1.6 0.45 9.7 0.0 3.0 2 2 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme K_oxygenase PF13434.1 gi|21226766|ref|NP_632688.1| - 0.021 13.7 0.0 2.1 7.1 0.0 2.4 3 0 0 3 3 2 0 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.13 gi|21226766|ref|NP_632688.1| - 0.027 14.1 0.2 0.3 10.7 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YjeF_N PF03853.10 gi|21226766|ref|NP_632688.1| - 0.032 13.8 0.0 6.7 6.2 0.0 2.4 2 0 0 2 2 2 0 YjeF-related protein N-terminus TrkA_N PF02254.13 gi|21226766|ref|NP_632688.1| - 0.049 13.6 0.1 10 6.1 0.0 2.6 2 0 0 2 2 2 0 TrkA-N domain Trp_halogenase PF04820.9 gi|21226766|ref|NP_632688.1| - 0.35 9.4 3.6 0.16 10.5 0.2 1.8 2 0 0 2 2 2 0 Tryptophan halogenase AdoHcyase_NAD PF00670.16 gi|21226766|ref|NP_632688.1| - 0.83 9.4 5.5 10 5.8 0.0 3.0 3 0 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FTHFS PF01268.14 gi|21226767|ref|NP_632689.1| - 0.011 13.7 0.9 0.015 13.3 0.6 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase DUF4398 PF14346.1 gi|21226767|ref|NP_632689.1| - 0.013 15.5 8.3 1.2 9.2 0.4 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4398) SLS PF14611.1 gi|21226767|ref|NP_632689.1| - 0.051 12.9 4.5 0.078 12.3 3.1 1.3 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator Tropomyosin_1 PF12718.2 gi|21226767|ref|NP_632689.1| - 0.35 10.7 8.3 0.053 13.3 2.4 2.1 2 1 0 2 2 2 0 Tropomyosin like Fib_alpha PF08702.5 gi|21226767|ref|NP_632689.1| - 1 9.4 7.3 2.7 8.0 0.7 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.6 gi|21226767|ref|NP_632689.1| - 7.6 7.0 9.0 9 6.7 1.6 3.2 2 1 1 3 3 3 0 Syntaxin 6, N-terminal NikR_C PF08753.6 gi|21226768|ref|NP_632690.1| - 1.6e-31 107.9 1.2 2.2e-31 107.5 0.8 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|21226768|ref|NP_632690.1| - 2.9e-09 36.4 0.9 4.5e-09 35.8 0.0 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family Nitroreductase PF00881.19 gi|21226769|ref|NP_632691.1| - 4.5e-34 117.6 0.0 5.7e-34 117.3 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|21226769|ref|NP_632691.1| - 0.012 14.8 0.3 0.15 11.2 0.2 2.5 1 1 1 2 2 2 0 Putative TM nitroreductase DUF4258 PF14076.1 gi|21226769|ref|NP_632691.1| - 0.059 13.3 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) IlvN PF07991.7 gi|21226770|ref|NP_632692.1| - 3.3e-80 267.2 0.5 5e-80 266.6 0.3 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|21226770|ref|NP_632692.1| - 5e-54 182.1 0.2 6.9e-54 181.7 0.2 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.14 gi|21226770|ref|NP_632692.1| - 2.4e-07 30.0 0.0 4.9e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|21226770|ref|NP_632692.1| - 3e-07 30.7 0.1 1.1e-06 28.9 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|21226770|ref|NP_632692.1| - 5.9e-07 29.4 0.0 1e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.16 gi|21226770|ref|NP_632692.1| - 0.0011 18.7 0.0 0.002 17.9 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.14 gi|21226770|ref|NP_632692.1| - 0.0079 16.6 0.0 0.019 15.4 0.0 1.7 1 0 0 1 1 1 1 CoA binding domain ApbA PF02558.11 gi|21226770|ref|NP_632692.1| - 0.022 14.2 0.1 0.048 13.1 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Nitro_FeMo-Co PF02579.12 gi|21226770|ref|NP_632692.1| - 0.03 14.4 0.0 0.074 13.1 0.0 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Rossmann-like PF10727.4 gi|21226770|ref|NP_632692.1| - 0.11 12.2 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Rossmann-like domain GFO_IDH_MocA PF01408.17 gi|21226770|ref|NP_632692.1| - 0.12 12.9 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold ALS_ss_C PF10369.4 gi|21226771|ref|NP_632693.1| - 4.9e-33 112.6 2.9 4.9e-33 112.6 2.0 1.9 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|21226771|ref|NP_632693.1| - 1.3e-21 76.1 0.4 5.8e-20 70.8 0.1 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 gi|21226771|ref|NP_632693.1| - 8e-16 57.1 3.2 4.7e-15 54.7 0.2 2.7 1 1 1 3 3 3 1 ACT domain ACT_4 PF13291.1 gi|21226771|ref|NP_632693.1| - 6.5e-06 26.4 1.2 6.5e-06 26.4 0.8 1.7 2 0 0 2 2 2 1 ACT domain NIL PF09383.5 gi|21226771|ref|NP_632693.1| - 0.037 13.6 0.1 0.55 9.8 0.0 2.3 2 1 0 2 2 2 0 NIL domain YbbR PF07949.7 gi|21226771|ref|NP_632693.1| - 0.094 12.8 4.4 3.2 7.9 0.0 2.4 2 0 0 2 2 2 0 YbbR-like protein Nucleo_P87 PF07267.6 gi|21226771|ref|NP_632693.1| - 0.13 10.9 0.3 0.14 10.8 0.2 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 TOBE PF03459.12 gi|21226771|ref|NP_632693.1| - 0.19 11.8 1.0 0.41 10.7 0.0 2.0 2 1 0 2 2 2 0 TOBE domain TPP_enzyme_N PF02776.13 gi|21226772|ref|NP_632694.1| - 1.1e-62 210.6 0.1 1e-61 207.4 0.0 2.4 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|21226772|ref|NP_632694.1| - 3.4e-56 189.0 0.0 3.4e-55 185.8 0.0 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|21226772|ref|NP_632694.1| - 1e-49 167.8 0.1 3.1e-49 166.2 0.0 1.9 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.14 gi|21226772|ref|NP_632694.1| - 0.014 14.9 0.0 0.031 13.7 0.0 1.6 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HMGL-like PF00682.14 gi|21226773|ref|NP_632695.1| - 9.3e-71 238.2 1.0 1.9e-70 237.1 0.7 1.5 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|21226773|ref|NP_632695.1| - 1.6e-36 125.0 1.9 3e-36 124.1 1.3 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain DUF489 PF04356.7 gi|21226773|ref|NP_632695.1| - 0.11 12.0 0.0 0.93 9.0 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF489) Acetyltransf_6 PF13480.1 gi|21226774|ref|NP_632696.1| - 3.1e-11 43.4 0.0 3.8e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FemAB PF02388.11 gi|21226774|ref|NP_632696.1| - 1.5e-09 37.0 7.9 1.5e-05 23.8 0.6 2.1 1 1 1 2 2 2 2 FemAB family Peptidase_M42 PF05343.9 gi|21226775|ref|NP_632697.1| - 2.3e-116 387.6 0.9 2.7e-116 387.4 0.6 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.23 gi|21226775|ref|NP_632697.1| - 2.5e-09 36.9 0.0 4.1e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|21226775|ref|NP_632697.1| - 0.024 14.4 0.0 0.26 10.9 0.0 2.2 2 0 0 2 2 2 0 Peptidase family M28 Peptidase_M18 PF02127.10 gi|21226775|ref|NP_632697.1| - 0.038 12.4 0.0 0.065 11.7 0.0 1.3 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Prefoldin_2 PF01920.15 gi|21226776|ref|NP_632698.1| - 3.3e-25 87.9 17.7 3.6e-25 87.7 12.3 1.0 1 0 0 1 1 1 1 Prefoldin subunit IMS PF00817.15 gi|21226776|ref|NP_632698.1| - 0.002 17.9 1.2 0.0026 17.5 0.8 1.1 1 0 0 1 1 1 1 impB/mucB/samB family Snf7 PF03357.16 gi|21226776|ref|NP_632698.1| - 0.0069 15.7 13.6 0.1 11.9 3.2 2.2 2 0 0 2 2 2 2 Snf7 GAS PF13851.1 gi|21226776|ref|NP_632698.1| - 0.031 13.4 16.2 0.12 11.5 11.2 1.7 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF948 PF06103.6 gi|21226776|ref|NP_632698.1| - 0.04 13.7 9.3 0.24 11.2 0.6 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Phasin_2 PF09361.5 gi|21226776|ref|NP_632698.1| - 0.061 13.3 9.0 0.079 12.9 4.9 2.1 1 1 0 1 1 1 0 Phasin protein DUF4559 PF15112.1 gi|21226776|ref|NP_632698.1| - 0.069 12.2 7.4 0.076 12.1 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Curto_V3 PF07436.6 gi|21226776|ref|NP_632698.1| - 0.084 13.0 1.0 0.24 11.5 0.1 2.0 2 1 0 2 2 2 0 Curtovirus V3 protein Binary_toxB PF03495.9 gi|21226776|ref|NP_632698.1| - 0.26 9.8 2.7 0.3 9.6 1.9 1.0 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Gp58 PF07902.6 gi|21226776|ref|NP_632698.1| - 0.31 9.2 5.7 0.43 8.7 4.0 1.2 1 0 0 1 1 1 0 gp58-like protein Init_tRNA_PT PF04179.7 gi|21226776|ref|NP_632698.1| - 0.33 9.7 6.8 0.34 9.7 4.7 1.0 1 0 0 1 1 1 0 Initiator tRNA phosphoribosyl transferase Radical_SAM_N PF08497.5 gi|21226776|ref|NP_632698.1| - 0.36 9.7 2.0 0.4 9.5 1.4 1.1 1 0 0 1 1 1 0 Radical SAM N-terminal AAA_27 PF13514.1 gi|21226776|ref|NP_632698.1| - 0.41 8.2 13.8 0.9 7.1 9.6 1.5 1 1 0 1 1 1 0 AAA domain DUF1465 PF07323.7 gi|21226776|ref|NP_632698.1| - 0.8 9.2 8.9 2.9 7.4 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) V_ATPase_I PF01496.14 gi|21226776|ref|NP_632698.1| - 0.87 7.3 7.8 1.2 6.8 5.4 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc24 PF08286.6 gi|21226776|ref|NP_632698.1| - 0.9 9.2 12.5 1 9.0 4.1 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF4404 PF14357.1 gi|21226776|ref|NP_632698.1| - 1 9.7 10.3 4.7 7.6 1.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Mnd1 PF03962.10 gi|21226776|ref|NP_632698.1| - 1.3 8.7 13.5 1.9 8.0 2.5 2.1 1 1 0 2 2 2 0 Mnd1 family Viral_P18 PF04521.8 gi|21226776|ref|NP_632698.1| - 1.3 8.5 10.5 0.97 8.8 0.9 2.3 2 0 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein Laminin_II PF06009.7 gi|21226776|ref|NP_632698.1| - 1.4 8.6 13.4 9 6.0 9.3 1.9 1 1 0 1 1 1 0 Laminin Domain II DUF4239 PF14023.1 gi|21226776|ref|NP_632698.1| - 1.6 8.0 5.3 1.3 8.3 3.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) CENP-F_leu_zip PF10473.4 gi|21226776|ref|NP_632698.1| - 1.9 8.3 19.6 18 5.2 14.0 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3552 PF12072.3 gi|21226776|ref|NP_632698.1| - 1.9 7.6 21.4 0.16 11.1 4.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF1481 PF07356.7 gi|21226776|ref|NP_632698.1| - 2.2 7.7 8.6 0.44 9.9 3.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1481) H-kinase_dim PF02895.9 gi|21226776|ref|NP_632698.1| - 2.2 8.6 12.4 2.4 8.5 1.6 2.4 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain DUF1825 PF08855.5 gi|21226776|ref|NP_632698.1| - 2.5 8.1 9.9 4.4 7.3 6.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1825) Syntaxin PF00804.20 gi|21226776|ref|NP_632698.1| - 2.7 8.2 15.2 1.3e+02 2.7 10.6 2.2 1 1 0 1 1 1 0 Syntaxin Prefoldin PF02996.12 gi|21226776|ref|NP_632698.1| - 4.2 7.0 16.1 1.8e+02 1.7 11.1 2.5 1 1 0 1 1 1 0 Prefoldin subunit Adeno_PIX PF03955.9 gi|21226776|ref|NP_632698.1| - 4.8 7.7 11.7 1.4 9.4 2.9 2.1 1 1 1 2 2 2 0 Adenovirus hexon-associated protein (IX) Spc7 PF08317.6 gi|21226776|ref|NP_632698.1| - 5.4 5.5 15.6 8.8 4.8 10.8 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein Tweety PF04906.8 gi|21226776|ref|NP_632698.1| - 6.4 5.0 6.8 0.81 8.0 1.1 1.8 1 1 1 2 2 2 0 Tweety Syntaxin_2 PF14523.1 gi|21226776|ref|NP_632698.1| - 7.7 6.6 15.9 46 4.1 11.1 1.9 1 1 0 1 1 1 0 Syntaxin-like protein APG6 PF04111.7 gi|21226776|ref|NP_632698.1| - 7.9 5.4 17.7 7.7 5.4 9.2 1.9 1 1 1 2 2 2 0 Autophagy protein Apg6 DUF4140 PF13600.1 gi|21226776|ref|NP_632698.1| - 8.3 6.9 13.9 6.7 7.2 1.7 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF3450 PF11932.3 gi|21226776|ref|NP_632698.1| - 8.5 5.5 20.4 2.6 7.2 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) SseC PF04888.7 gi|21226776|ref|NP_632698.1| - 9.6 5.4 15.1 0.53 9.5 0.7 2.1 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family DHH PF01368.15 gi|21226777|ref|NP_632699.1| - 1.1e-12 47.8 0.5 5e-12 45.6 0.3 1.9 1 1 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|21226777|ref|NP_632699.1| - 2.3e-08 33.5 0.9 5.5e-08 32.4 0.6 1.7 1 0 0 1 1 1 1 DHHA1 domain AMP-binding_C_2 PF14535.1 gi|21226778|ref|NP_632700.1| - 4.4e-32 109.9 0.4 1.1e-31 108.7 0.0 1.9 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|21226778|ref|NP_632700.1| - 1.4e-25 89.5 0.1 3.3e-25 88.3 0.0 1.6 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|21226778|ref|NP_632700.1| - 1.1e-07 30.8 0.0 0.00013 20.7 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE GH3 PF03321.8 gi|21226778|ref|NP_632700.1| - 0.097 11.1 0.0 1.2 7.5 0.0 2.2 2 0 0 2 2 2 0 GH3 auxin-responsive promoter ACT PF01842.20 gi|21226779|ref|NP_632701.1| - 5.8e-20 70.3 0.2 5.2e-10 38.6 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.1 gi|21226779|ref|NP_632701.1| - 2.6e-07 30.0 0.3 0.02 14.3 0.0 2.6 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.1 gi|21226779|ref|NP_632701.1| - 2e-06 28.0 0.5 0.0049 17.1 0.0 2.3 2 0 0 2 2 2 2 ACT domain DUF2103 PF09876.4 gi|21226780|ref|NP_632702.1| - 2e-40 136.7 1.1 2.4e-40 136.4 0.8 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) Semialdhyde_dh PF01118.19 gi|21226780|ref|NP_632702.1| - 0.045 14.0 0.1 0.058 13.7 0.1 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NYN PF01936.13 gi|21226782|ref|NP_632704.1| - 1.5e-23 83.6 0.0 2.1e-23 83.2 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.8 gi|21226782|ref|NP_632704.1| - 0.018 14.5 0.0 0.95 8.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF460) Rhomboid PF01694.17 gi|21226784|ref|NP_632706.1| - 1.1e-31 109.7 14.1 1.1e-31 109.7 9.8 1.8 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.5 gi|21226784|ref|NP_632706.1| - 1.6e-05 25.1 0.6 1.6e-05 25.1 0.4 2.3 2 1 1 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) DUF1576 PF07613.6 gi|21226784|ref|NP_632706.1| - 0.0045 16.5 4.4 0.0072 15.8 3.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1576) DUF457 PF04307.9 gi|21226784|ref|NP_632706.1| - 0.84 8.9 7.3 0.094 12.0 1.8 1.8 2 0 0 2 2 2 0 Predicted membrane-bound metal-dependent hydrolase (DUF457) Prismane PF03063.15 gi|21226786|ref|NP_632708.1| - 7.1e-115 384.3 3.6 1.3e-95 320.7 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.2 gi|21226786|ref|NP_632708.1| - 3.6e-06 27.2 7.4 3.6e-06 27.2 5.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21226786|ref|NP_632708.1| - 1.4e-05 25.4 11.0 0.006 16.9 0.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226786|ref|NP_632708.1| - 3.4e-05 24.0 10.2 3.4e-05 24.0 7.0 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226786|ref|NP_632708.1| - 4.1e-05 23.5 7.0 4.1e-05 23.5 4.8 2.6 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226786|ref|NP_632708.1| - 5.6e-05 22.9 6.3 5.6e-05 22.9 4.3 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21226786|ref|NP_632708.1| - 0.00095 18.9 18.7 0.0062 16.3 9.6 3.5 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226786|ref|NP_632708.1| - 0.0024 17.6 22.1 0.018 14.9 1.4 3.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21226786|ref|NP_632708.1| - 0.0077 16.5 0.9 0.0077 16.5 0.6 3.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Ribosomal_S2 PF00318.15 gi|21226786|ref|NP_632708.1| - 0.027 13.6 0.0 0.052 12.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S2 Fer4_4 PF12800.2 gi|21226786|ref|NP_632708.1| - 0.034 14.4 26.0 0.12 12.7 1.2 4.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21226786|ref|NP_632708.1| - 0.055 14.2 11.1 0.61 10.8 0.1 3.4 3 0 0 3 3 2 0 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|21226786|ref|NP_632708.1| - 0.21 11.2 26.4 0.047 13.3 2.4 3.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21226786|ref|NP_632708.1| - 0.38 10.7 27.2 0.045 13.6 2.6 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain CO_dh PF02552.11 gi|21226787|ref|NP_632709.1| - 3.7e-31 107.9 0.0 4.4e-31 107.6 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.17 gi|21226787|ref|NP_632709.1| - 1.2e-08 34.7 0.0 1.8e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain SpoVS PF04232.7 gi|21226787|ref|NP_632709.1| - 0.016 14.7 0.7 0.22 11.1 0.1 2.4 2 2 0 2 2 2 0 Stage V sporulation protein S (SpoVS) SBP_bac_11 PF13531.1 gi|21226787|ref|NP_632709.1| - 0.023 14.3 0.3 0.11 12.1 0.2 1.8 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein Mfa2 PF08842.5 gi|21226787|ref|NP_632709.1| - 0.11 11.8 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CdhC PF03598.10 gi|21226788|ref|NP_632710.1| - 2.9e-186 618.8 0.2 3.5e-186 618.6 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CbiA PF01656.18 gi|21226789|ref|NP_632711.1| - 4.3e-32 111.1 0.3 5.4e-32 110.7 0.2 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|21226789|ref|NP_632711.1| - 7.6e-09 35.1 2.3 5.6e-08 32.3 1.6 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|21226789|ref|NP_632711.1| - 4.5e-07 29.2 2.5 1.4e-05 24.3 1.8 2.3 1 1 1 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|21226789|ref|NP_632711.1| - 1.4e-05 25.1 0.3 0.056 13.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.10 gi|21226789|ref|NP_632711.1| - 2.6e-05 23.9 0.4 0.13 11.9 0.1 2.2 2 0 0 2 2 2 2 NTPase Toprim PF01751.17 gi|21226789|ref|NP_632711.1| - 0.00018 21.4 0.1 0.25 11.3 0.0 2.4 2 0 0 2 2 2 2 Toprim domain YhjQ PF06564.7 gi|21226789|ref|NP_632711.1| - 0.00027 20.3 0.1 0.12 11.7 0.0 2.3 2 1 0 2 2 2 1 YhjQ protein MipZ PF09140.6 gi|21226789|ref|NP_632711.1| - 0.00037 19.6 0.6 0.0098 15.0 0.0 2.3 1 1 0 2 2 2 1 ATPase MipZ AAA_26 PF13500.1 gi|21226789|ref|NP_632711.1| - 0.00079 19.0 3.1 0.12 12.0 0.1 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|21226789|ref|NP_632711.1| - 0.0022 18.0 0.1 0.004 17.1 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|21226789|ref|NP_632711.1| - 0.0029 18.4 3.8 0.11 13.3 2.4 2.5 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.12 gi|21226789|ref|NP_632711.1| - 0.0033 17.2 3.9 0.0065 16.3 0.5 2.3 2 1 0 2 2 2 1 Domain of unknown function DUF87 AAA_19 PF13245.1 gi|21226789|ref|NP_632711.1| - 0.0035 17.0 0.3 0.0099 15.6 0.2 1.8 1 0 0 1 1 1 1 Part of AAA domain MobB PF03205.9 gi|21226789|ref|NP_632711.1| - 0.0047 16.6 0.0 0.011 15.4 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B APS_kinase PF01583.15 gi|21226789|ref|NP_632711.1| - 0.0052 16.4 0.1 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_22 PF13401.1 gi|21226789|ref|NP_632711.1| - 0.0068 16.5 0.9 0.08 13.0 0.1 2.2 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|21226789|ref|NP_632711.1| - 0.0098 16.2 0.4 0.022 15.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain Toprim_4 PF13662.1 gi|21226789|ref|NP_632711.1| - 0.013 15.4 0.2 0.18 11.8 0.0 2.2 2 0 0 2 2 2 0 Toprim domain DUF2365 PF10157.4 gi|21226789|ref|NP_632711.1| - 0.017 15.0 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2365) DUF2075 PF09848.4 gi|21226789|ref|NP_632711.1| - 0.018 14.0 0.0 0.021 13.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) PRK PF00485.13 gi|21226789|ref|NP_632711.1| - 0.022 14.3 0.2 0.15 11.5 0.0 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family TIP49 PF06068.8 gi|21226789|ref|NP_632711.1| - 0.031 13.0 0.2 0.088 11.5 0.2 1.7 2 0 0 2 2 2 0 TIP49 C-terminus AAA_30 PF13604.1 gi|21226789|ref|NP_632711.1| - 0.032 13.7 0.3 0.088 12.3 0.2 1.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|21226789|ref|NP_632711.1| - 0.034 14.4 0.3 0.044 14.0 0.2 1.6 1 1 0 1 1 1 0 ABC transporter KaiC PF06745.8 gi|21226789|ref|NP_632711.1| - 0.036 13.1 0.3 0.32 10.0 0.0 2.2 2 1 0 2 2 2 0 KaiC AAA_10 PF12846.2 gi|21226789|ref|NP_632711.1| - 0.039 13.3 0.2 0.059 12.7 0.2 1.7 1 1 0 1 1 1 0 AAA-like domain NB-ARC PF00931.17 gi|21226789|ref|NP_632711.1| - 0.041 12.7 0.0 0.059 12.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain SRP54 PF00448.17 gi|21226789|ref|NP_632711.1| - 0.042 13.3 3.0 0.29 10.5 0.6 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF853 PF05872.7 gi|21226789|ref|NP_632711.1| - 0.052 11.8 0.1 0.077 11.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Helicase_RecD PF05127.9 gi|21226789|ref|NP_632711.1| - 0.054 13.1 0.1 0.091 12.3 0.1 1.6 1 1 0 1 1 1 0 Helicase PIF1 PF05970.9 gi|21226789|ref|NP_632711.1| - 0.07 12.0 0.1 0.12 11.3 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase ArgK PF03308.11 gi|21226789|ref|NP_632711.1| - 0.074 11.8 1.9 0.25 10.0 0.1 2.0 2 0 0 2 2 2 0 ArgK protein KAP_NTPase PF07693.9 gi|21226789|ref|NP_632711.1| - 0.075 12.0 0.0 0.079 11.9 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain RecA PF00154.16 gi|21226789|ref|NP_632711.1| - 0.096 11.7 0.2 1.3 7.9 0.0 2.2 2 0 0 2 2 2 0 recA bacterial DNA recombination protein Zeta_toxin PF06414.7 gi|21226789|ref|NP_632711.1| - 0.097 11.7 0.1 0.2 10.7 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.7 gi|21226789|ref|NP_632711.1| - 0.11 12.0 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.21 gi|21226789|ref|NP_632711.1| - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|21226789|ref|NP_632711.1| - 0.12 12.5 0.0 0.9 9.7 0.0 2.3 3 0 0 3 3 2 0 RNA helicase VirC1 PF07015.6 gi|21226789|ref|NP_632711.1| - 0.14 11.2 0.7 2.7 7.0 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein PEPcase_2 PF14010.1 gi|21226789|ref|NP_632711.1| - 0.15 10.3 0.5 0.21 9.8 0.3 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase AAA_25 PF13481.1 gi|21226789|ref|NP_632711.1| - 0.18 11.1 4.6 0.64 9.3 2.0 2.7 1 1 1 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.4 gi|21226789|ref|NP_632711.1| - 0.19 10.3 0.5 0.29 9.7 0.3 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CdhD PF03599.11 gi|21226790|ref|NP_632712.1| - 1.3e-92 310.3 2.1 5e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit Pterin_bind PF00809.17 gi|21226790|ref|NP_632712.1| - 0.086 12.1 0.3 0.94 8.7 0.2 2.3 1 1 0 1 1 1 0 Pterin binding enzyme CdhD PF03599.11 gi|21226791|ref|NP_632713.1| - 1.3e-158 527.4 0.3 1.6e-158 527.2 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|21226791|ref|NP_632713.1| - 5.2e-16 57.9 1.5 5.2e-16 57.9 1.1 2.1 2 0 0 2 2 2 1 Putative Fe-S cluster Peripla_BP_6 PF13458.1 gi|21226791|ref|NP_632713.1| - 0.00014 21.3 0.1 0.0061 15.9 0.0 2.2 2 0 0 2 2 2 1 Periplasmic binding protein Pterin_bind PF00809.17 gi|21226791|ref|NP_632713.1| - 0.00055 19.3 0.0 0.0034 16.7 0.0 2.0 1 1 0 1 1 1 1 Pterin binding enzyme DUF2007 PF09413.5 gi|21226791|ref|NP_632713.1| - 0.014 15.1 0.0 0.058 13.2 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2007) MOFRL PF05161.8 gi|21226791|ref|NP_632713.1| - 0.037 14.1 0.1 0.072 13.2 0.1 1.4 1 0 0 1 1 1 0 MOFRL family NMD3 PF04981.8 gi|21226792|ref|NP_632714.1| - 1.6e-66 223.8 0.3 2.5e-66 223.1 0.1 1.3 2 0 0 2 2 2 1 NMD3 family zinc_ribbon_2 PF13240.1 gi|21226792|ref|NP_632714.1| - 0.035 13.6 3.5 1.4 8.5 0.7 2.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-tcix PF14952.1 gi|21226792|ref|NP_632714.1| - 0.056 12.7 6.5 2.6 7.4 1.1 2.7 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding Prok-RING_1 PF14446.1 gi|21226792|ref|NP_632714.1| - 0.066 12.9 0.1 0.066 12.9 0.0 3.0 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.1 gi|21226792|ref|NP_632714.1| - 0.13 11.4 7.2 6.8 6.0 3.2 2.6 2 0 0 2 2 2 0 zinc-ribbon domain ATP-grasp_3 PF02655.9 gi|21226793|ref|NP_632715.1| - 3e-53 180.0 0.0 4.6e-53 179.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|21226793|ref|NP_632715.1| - 4.1e-21 75.5 0.0 6.3e-21 74.9 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21226793|ref|NP_632715.1| - 2.1e-17 62.9 0.0 4.7e-17 61.7 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 gi|21226793|ref|NP_632715.1| - 1.5e-13 50.5 0.0 1e-12 47.7 0.0 2.0 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.6 gi|21226793|ref|NP_632715.1| - 2e-09 37.2 0.0 4.2e-09 36.1 0.0 1.6 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|21226793|ref|NP_632715.1| - 5.4e-08 32.4 0.0 1.2e-06 28.0 0.0 2.1 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.14 gi|21226793|ref|NP_632715.1| - 0.00097 18.7 0.1 0.33 10.4 0.0 2.3 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.1 gi|21226793|ref|NP_632715.1| - 0.0032 16.6 0.0 0.0086 15.2 0.0 1.6 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.17 gi|21226793|ref|NP_632715.1| - 0.0042 16.4 0.0 0.021 14.1 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain TFIIE_alpha PF02002.12 gi|21226794|ref|NP_632716.1| - 6.6e-18 64.1 0.5 1e-17 63.5 0.4 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit RepL PF05732.6 gi|21226794|ref|NP_632716.1| - 0.023 13.8 0.0 0.035 13.3 0.0 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) TF_Zn_Ribbon PF08271.7 gi|21226794|ref|NP_632716.1| - 0.03 13.6 3.6 0.069 12.4 1.8 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding DUF1610 PF07754.6 gi|21226794|ref|NP_632716.1| - 0.13 12.4 1.7 0.69 10.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) HD PF01966.17 gi|21226795|ref|NP_632717.1| - 9.6e-16 57.8 1.8 1.5e-15 57.2 1.3 1.3 1 0 0 1 1 1 1 HD domain DUF4033 PF13225.1 gi|21226795|ref|NP_632717.1| - 0.086 12.4 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Proteasome PF00227.21 gi|21226796|ref|NP_632718.1| - 2.2e-55 186.9 1.1 2.4e-55 186.7 0.7 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.1 gi|21226796|ref|NP_632718.1| - 0.036 13.1 0.0 0.052 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Beta-Casp PF10996.3 gi|21226797|ref|NP_632719.1| - 1.5e-36 125.0 0.0 3.6e-36 123.8 0.0 1.7 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|21226797|ref|NP_632719.1| - 1e-24 87.2 0.3 1.8e-24 86.4 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|21226797|ref|NP_632719.1| - 9.2e-12 44.5 0.0 2.2e-11 43.3 0.0 1.7 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|21226797|ref|NP_632719.1| - 8.5e-11 41.7 0.1 2.3e-10 40.3 0.1 1.8 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.12 gi|21226797|ref|NP_632719.1| - 4e-06 26.2 2.6 2.5e-05 23.7 0.6 3.1 2 1 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.1 gi|21226797|ref|NP_632719.1| - 1.1e-05 25.1 0.0 3.7e-05 23.4 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_1 PF00013.24 gi|21226797|ref|NP_632719.1| - 0.0003 20.3 2.8 0.0029 17.2 0.5 2.5 2 0 0 2 2 2 1 KH domain KH_4 PF13083.1 gi|21226797|ref|NP_632719.1| - 0.0032 17.0 0.0 0.0078 15.8 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|21226797|ref|NP_632719.1| - 0.025 14.2 1.8 0.13 11.9 0.3 2.6 2 0 0 2 2 2 0 KH domain HAD_2 PF13419.1 gi|21226798|ref|NP_632720.1| - 9.9e-26 91.0 0.0 1.2e-25 90.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21226798|ref|NP_632720.1| - 1.4e-10 41.9 0.0 3.4e-09 37.4 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21226798|ref|NP_632720.1| - 1.8e-05 24.3 0.0 3.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|21226798|ref|NP_632720.1| - 0.00044 20.4 0.1 0.00095 19.3 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.13 gi|21226798|ref|NP_632720.1| - 0.0087 15.7 0.0 0.22 11.1 0.0 2.1 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase FtsZ_C PF12327.3 gi|21226799|ref|NP_632721.1| - 8.4e-34 115.5 1.9 1.8e-33 114.4 0.1 2.5 3 1 0 3 3 3 1 FtsZ family, C-terminal domain Tubulin PF00091.20 gi|21226799|ref|NP_632721.1| - 7.5e-33 114.1 0.5 3.1e-32 112.1 0.4 1.9 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain ThiF PF00899.16 gi|21226799|ref|NP_632721.1| - 0.0082 15.9 0.0 0.057 13.2 0.0 2.1 2 0 0 2 2 2 1 ThiF family TrkA_N PF02254.13 gi|21226799|ref|NP_632721.1| - 0.21 11.6 1.4 1.8 8.5 0.1 2.9 3 1 0 3 3 3 0 TrkA-N domain Pterin_bind PF00809.17 gi|21226800|ref|NP_632722.1| - 2.2e-14 53.3 0.5 6.5e-13 48.5 0.4 2.7 1 1 0 1 1 1 1 Pterin binding enzyme DUF4346 PF14251.1 gi|21226800|ref|NP_632722.1| - 7.1e-10 38.6 0.0 1.9e-09 37.2 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) CdhD PF03599.11 gi|21226800|ref|NP_632722.1| - 2.5e-05 22.9 0.0 0.00011 20.8 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF561 PF04481.7 gi|21226800|ref|NP_632722.1| - 0.039 12.8 0.1 0.064 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) H_PPase PF03030.11 gi|21226802|ref|NP_632724.1| - 1.9e-271 902.2 59.1 2.1e-271 902.0 41.0 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase UPF0139 PF03669.8 gi|21226802|ref|NP_632724.1| - 0.055 12.9 0.1 0.29 10.6 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) H_PPase PF03030.11 gi|21226803|ref|NP_632725.1| - 1.3e-268 892.8 47.3 1.5e-268 892.7 32.8 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase MFS_1 PF07690.11 gi|21226804|ref|NP_632726.1| - 6.3e-35 120.5 43.6 2.1e-28 99.0 18.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|21226804|ref|NP_632726.1| - 1.4e-09 37.1 10.1 1.4e-09 37.1 7.0 3.1 1 1 2 3 3 3 1 Sugar (and other) transporter MFS_3 PF05977.8 gi|21226804|ref|NP_632726.1| - 0.00026 19.2 0.7 0.00026 19.2 0.5 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_1 PF07690.11 gi|21226805|ref|NP_632727.1| - 6.6e-34 117.1 40.4 9.8e-26 90.2 6.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|21226805|ref|NP_632727.1| - 1.2e-07 30.6 7.6 1.2e-07 30.6 5.3 2.2 2 1 0 2 2 2 1 Sugar (and other) transporter DUF1228 PF06779.9 gi|21226805|ref|NP_632727.1| - 0.049 13.6 0.4 0.049 13.6 0.3 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1228) PUA PF01472.15 gi|21226806|ref|NP_632728.1| - 1.5e-21 75.9 1.0 2.3e-21 75.2 0.7 1.3 1 0 0 1 1 1 1 PUA domain KH_2 PF07650.12 gi|21226806|ref|NP_632728.1| - 0.00039 19.9 1.2 0.49 9.9 0.0 2.7 2 1 0 2 2 2 2 KH domain DUF552 PF04472.7 gi|21226807|ref|NP_632729.1| - 6.2e-18 64.4 2.2 9.8e-18 63.8 1.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF552) Beta-lactamase2 PF13354.1 gi|21226807|ref|NP_632729.1| - 0.096 12.1 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Beta-lactamase enzyme family zf-ZPR1 PF03367.8 gi|21226808|ref|NP_632730.1| - 1.1e-44 151.4 0.1 1.4e-44 151.1 0.1 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain YdjO PF14169.1 gi|21226808|ref|NP_632730.1| - 0.013 14.9 0.2 0.63 9.5 0.0 2.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Nse4-Nse3_bdg PF15412.1 gi|21226808|ref|NP_632730.1| - 0.027 14.3 0.1 0.054 13.3 0.0 1.5 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE tRNA-synt_2b PF00587.20 gi|21226809|ref|NP_632731.1| - 5.9e-21 74.8 0.1 1.3e-20 73.6 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|21226809|ref|NP_632731.1| - 1.7e-20 72.7 1.0 2.6e-20 72.1 0.1 1.7 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.6 gi|21226809|ref|NP_632731.1| - 8.4e-17 60.8 1.0 1.6e-16 59.9 0.1 1.9 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal UPF0150 PF03681.10 gi|21226809|ref|NP_632731.1| - 0.022 14.3 0.6 0.064 12.8 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0150) DBI_PRT PF02277.12 gi|21226810|ref|NP_632732.1| - 1.5e-23 83.4 1.3 2e-23 82.9 0.9 1.1 1 0 0 1 1 1 1 Phosphoribosyltransferase zf-ribbon_3 PF13248.1 gi|21226811|ref|NP_632733.1| - 0.00047 19.2 0.8 0.51 9.6 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|21226811|ref|NP_632733.1| - 0.00054 19.7 1.3 0.00084 19.1 0.9 1.4 1 0 0 1 1 1 1 Double zinc ribbon C1_1 PF00130.17 gi|21226811|ref|NP_632733.1| - 0.0043 16.7 1.9 0.0054 16.4 1.3 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zinc_ribbon_2 PF13240.1 gi|21226811|ref|NP_632733.1| - 0.0056 16.1 2.2 0.87 9.1 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|21226811|ref|NP_632733.1| - 0.006 16.3 1.4 0.0085 15.8 1.0 1.3 1 0 0 1 1 1 1 zinc-ribbons Nudix_N_2 PF14803.1 gi|21226811|ref|NP_632733.1| - 0.011 15.3 2.3 0.85 9.3 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal Lant_dehyd_N PF04737.8 gi|21226811|ref|NP_632733.1| - 0.012 15.5 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 Lantibiotic dehydratase, N terminus FYVE PF01363.16 gi|21226811|ref|NP_632733.1| - 0.037 13.9 4.9 0.065 13.1 3.4 1.5 1 1 0 1 1 1 0 FYVE zinc finger OrfB_Zn_ribbon PF07282.6 gi|21226811|ref|NP_632733.1| - 0.095 12.3 1.8 0.13 11.9 1.2 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain RNA_POL_M_15KD PF02150.11 gi|21226811|ref|NP_632733.1| - 0.13 11.9 4.0 0.33 10.6 2.7 1.6 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit UPF0547 PF10571.4 gi|21226811|ref|NP_632733.1| - 0.37 10.5 3.3 0.89 9.3 0.2 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TFIIS_C PF01096.13 gi|21226811|ref|NP_632733.1| - 0.54 9.9 3.6 0.73 9.5 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Prim_Zn_Ribbon PF08273.7 gi|21226811|ref|NP_632733.1| - 0.55 10.3 3.0 9.6 6.3 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase RRN7 PF11781.3 gi|21226811|ref|NP_632733.1| - 1.5 8.4 7.7 16 5.0 5.3 2.1 1 1 0 1 1 1 0 RNA polymerase I-specific transcription initiation factor Rrn7 GFA PF04828.9 gi|21226811|ref|NP_632733.1| - 2.3 8.2 5.7 1.2 9.1 0.2 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Zn-ribbon_8 PF09723.5 gi|21226811|ref|NP_632733.1| - 4.2 7.4 6.2 13 5.7 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DDE_Tnp_1 PF01609.16 gi|21226813|ref|NP_632735.1| - 4.8e-12 45.8 0.8 2.4e-11 43.5 0.6 2.0 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.6 gi|21226813|ref|NP_632735.1| - 0.075 13.0 1.1 12 5.9 0.0 2.8 2 0 0 2 2 2 0 TnsA endonuclease N terminal DUF1670 PF07900.6 gi|21226814|ref|NP_632736.1| - 1.4e-84 282.7 0.4 1.7e-84 282.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) HTH_29 PF13551.1 gi|21226814|ref|NP_632736.1| - 0.00027 21.0 0.1 2.6 8.2 0.0 3.1 2 1 1 3 3 3 2 Winged helix-turn helix HTH_DeoR PF08220.7 gi|21226814|ref|NP_632736.1| - 0.0012 18.3 0.1 0.0027 17.2 0.0 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_23 PF13384.1 gi|21226814|ref|NP_632736.1| - 0.025 14.2 1.2 0.43 10.2 0.1 2.7 2 1 1 3 3 3 0 Homeodomain-like domain HTH_11 PF08279.7 gi|21226814|ref|NP_632736.1| - 0.21 11.2 2.2 0.29 10.8 0.2 2.1 2 0 0 2 2 2 0 HTH domain HTH_7 PF02796.10 gi|21226814|ref|NP_632736.1| - 4 7.3 5.1 14 5.6 0.1 2.8 2 1 1 3 3 3 0 Helix-turn-helix domain of resolvase DUF1670 PF07900.6 gi|21226815|ref|NP_632737.1| - 4.6e-94 313.7 0.8 5.5e-94 313.5 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) DeoC PF01791.4 gi|21226816|ref|NP_632738.1| - 5.1e-53 179.7 0.0 6.2e-53 179.5 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PK PF00224.16 gi|21226817|ref|NP_632739.1| - 1.4e-125 418.5 1.4 1.8e-125 418.1 1.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.11 gi|21226817|ref|NP_632739.1| - 7.5e-24 83.5 0.0 2.3e-23 81.9 0.0 1.9 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.9 gi|21226817|ref|NP_632739.1| - 4.2e-06 25.8 0.9 9.1e-06 24.7 0.6 1.6 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family CP_ATPgrasp_2 PF14403.1 gi|21226818|ref|NP_632740.1| - 0.059 12.0 0.0 0.078 11.6 0.0 1.1 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 TPR_11 PF13414.1 gi|21226819|ref|NP_632741.1| - 2.6e-16 58.9 0.8 7.6e-08 31.8 0.0 2.2 1 1 1 2 2 2 2 TPR repeat TPR_1 PF00515.23 gi|21226819|ref|NP_632741.1| - 4.7e-13 48.1 0.2 3.2e-09 35.9 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21226819|ref|NP_632741.1| - 1.1e-08 34.3 4.1 4.7e-07 29.2 0.0 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21226819|ref|NP_632741.1| - 2.4e-08 33.7 0.1 0.00063 19.6 0.0 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21226819|ref|NP_632741.1| - 3.8e-08 32.5 1.6 1.5e-05 24.3 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21226819|ref|NP_632741.1| - 2.4e-06 28.0 0.4 0.00048 20.7 0.1 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21226819|ref|NP_632741.1| - 1.4e-05 25.3 0.2 0.021 15.3 0.0 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21226819|ref|NP_632741.1| - 4.1e-05 23.3 0.0 5e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21226819|ref|NP_632741.1| - 0.0011 18.9 0.2 0.22 11.8 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21226819|ref|NP_632741.1| - 0.0022 18.2 0.6 0.04 14.2 0.2 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21226819|ref|NP_632741.1| - 0.0086 15.2 0.0 0.015 14.5 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_6 PF13174.1 gi|21226819|ref|NP_632741.1| - 0.012 16.0 0.2 3.4 8.3 0.0 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21226819|ref|NP_632741.1| - 0.024 14.4 0.2 4.8 7.2 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat DAO PF01266.19 gi|21226820|ref|NP_632742.1| - 2.6e-15 56.1 1.8 2.2e-07 30.1 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|21226820|ref|NP_632742.1| - 2.7e-11 43.1 5.5 2.1e-06 27.0 0.0 2.4 3 0 0 3 3 3 2 FAD binding domain FAD_oxidored PF12831.2 gi|21226820|ref|NP_632742.1| - 9.2e-11 41.4 0.4 2.2e-10 40.2 0.3 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21226820|ref|NP_632742.1| - 3.4e-09 35.6 1.5 1.9e-08 33.2 0.1 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.9 gi|21226820|ref|NP_632742.1| - 1.5e-08 34.7 0.0 3.5e-08 33.5 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21226820|ref|NP_632742.1| - 1.6e-07 30.5 2.9 7.5e-07 28.3 2.0 1.9 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|21226820|ref|NP_632742.1| - 1.7e-07 30.4 1.3 2.6e-07 29.8 0.2 1.8 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.1 gi|21226820|ref|NP_632742.1| - 1.9e-07 31.0 0.3 5.7e-07 29.4 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|21226820|ref|NP_632742.1| - 9.2e-07 28.0 1.4 1.5e-05 24.0 0.9 2.5 1 1 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.12 gi|21226820|ref|NP_632742.1| - 1.1e-06 27.9 0.1 4.7e-06 25.8 0.0 1.9 2 0 0 2 2 2 1 Thi4 family Pyr_redox_3 PF13738.1 gi|21226820|ref|NP_632742.1| - 9.9e-05 22.4 0.0 0.00043 20.4 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|21226820|ref|NP_632742.1| - 0.00029 19.5 0.8 0.04 12.5 0.2 2.3 1 1 1 2 2 2 2 Tryptophan halogenase Pyr_redox PF00070.22 gi|21226820|ref|NP_632742.1| - 0.0013 19.0 1.4 0.086 13.2 0.0 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|21226820|ref|NP_632742.1| - 0.0054 16.4 0.0 0.048 13.3 0.0 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.1 gi|21226820|ref|NP_632742.1| - 0.0073 16.0 0.1 2 8.1 0.0 2.5 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_Gly3P_dh_N PF01210.18 gi|21226820|ref|NP_632742.1| - 0.06 13.0 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K_oxygenase PF13434.1 gi|21226820|ref|NP_632742.1| - 0.18 10.6 0.0 7.5 5.3 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Fer4_NifH PF00142.13 gi|21226821|ref|NP_632743.1| - 5.1e-129 429.2 1.2 5.7e-129 429.1 0.8 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|21226821|ref|NP_632743.1| - 6.9e-10 38.6 0.5 2.4e-09 36.8 0.1 2.0 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|21226821|ref|NP_632743.1| - 2.9e-06 26.5 0.2 4.9e-06 25.7 0.1 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|21226821|ref|NP_632743.1| - 6.7e-06 26.1 0.0 1.3e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|21226821|ref|NP_632743.1| - 0.00066 19.2 0.1 0.00096 18.6 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain ArgK PF03308.11 gi|21226821|ref|NP_632743.1| - 0.0013 17.5 0.4 0.0018 17.1 0.3 1.3 1 0 0 1 1 1 1 ArgK protein YhjQ PF06564.7 gi|21226821|ref|NP_632743.1| - 0.0021 17.4 0.0 0.11 11.8 0.0 2.1 2 0 0 2 2 2 1 YhjQ protein SRP54 PF00448.17 gi|21226821|ref|NP_632743.1| - 0.0069 15.8 0.6 0.013 14.9 0.4 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain MipZ PF09140.6 gi|21226821|ref|NP_632743.1| - 0.0089 15.1 0.4 0.041 12.9 0.1 1.9 2 0 0 2 2 2 1 ATPase MipZ RNA_helicase PF00910.17 gi|21226821|ref|NP_632743.1| - 0.0099 16.0 0.2 0.032 14.4 0.1 1.9 2 0 0 2 2 2 1 RNA helicase AAA_25 PF13481.1 gi|21226821|ref|NP_632743.1| - 0.01 15.2 0.1 0.021 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|21226821|ref|NP_632743.1| - 0.021 14.3 0.2 0.032 13.7 0.1 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_16 PF13191.1 gi|21226821|ref|NP_632743.1| - 0.029 14.3 0.0 0.056 13.4 0.0 1.5 2 0 0 2 2 1 0 AAA ATPase domain DUF87 PF01935.12 gi|21226821|ref|NP_632743.1| - 0.051 13.3 0.3 0.096 12.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|21226821|ref|NP_632743.1| - 0.07 13.2 0.1 0.26 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.1 gi|21226821|ref|NP_632743.1| - 0.084 12.4 0.7 0.15 11.6 0.1 1.7 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|21226821|ref|NP_632743.1| - 0.14 12.4 0.5 0.23 11.7 0.1 1.5 2 0 0 2 2 1 0 ABC transporter NB-ARC PF00931.17 gi|21226821|ref|NP_632743.1| - 0.14 10.9 0.4 0.22 10.3 0.3 1.3 1 0 0 1 1 1 0 NB-ARC domain P-II PF00543.17 gi|21226822|ref|NP_632744.1| - 2.7e-32 111.2 0.8 3e-32 111.1 0.6 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II MEKHLA PF08670.6 gi|21226822|ref|NP_632744.1| - 0.09 12.3 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 MEKHLA domain P-II PF00543.17 gi|21226823|ref|NP_632745.1| - 1.2e-34 118.8 0.1 1.6e-34 118.3 0.0 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.14 gi|21226824|ref|NP_632746.1| - 5.8e-148 492.7 0.3 8e-148 492.3 0.2 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Thioredoxin_6 PF13848.1 gi|21226824|ref|NP_632746.1| - 0.041 13.6 0.1 0.18 11.6 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin-like domain Cob_adeno_trans PF01923.13 gi|21226824|ref|NP_632746.1| - 0.048 13.4 0.1 0.3 10.8 0.0 2.1 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Oxidored_nitro PF00148.14 gi|21226825|ref|NP_632747.1| - 1.6e-122 409.0 0.0 1.8e-122 408.8 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.14 gi|21226826|ref|NP_632748.1| - 3.8e-124 414.3 0.2 4.4e-124 414.1 0.1 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase TPP_enzyme_N PF02776.13 gi|21226826|ref|NP_632748.1| - 0.13 11.6 0.0 2.2 7.7 0.0 2.2 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Oxidored_nitro PF00148.14 gi|21226827|ref|NP_632749.1| - 9e-138 459.2 0.0 1.1e-137 458.9 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase SBP_bac_11 PF13531.1 gi|21226828|ref|NP_632750.1| - 1.2e-56 191.9 0.0 1.3e-56 191.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|21226828|ref|NP_632750.1| - 2.2e-17 63.7 0.1 7.1e-16 58.8 0.1 2.1 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.1 gi|21226828|ref|NP_632750.1| - 2.7e-08 33.4 0.0 1e-07 31.5 0.0 1.7 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like_2 PF12849.2 gi|21226828|ref|NP_632750.1| - 1.8e-07 30.9 1.1 5.3e-07 29.3 0.3 1.8 1 1 1 2 2 2 1 PBP superfamily domain SBP_bac_8 PF13416.1 gi|21226828|ref|NP_632750.1| - 1e-05 25.4 0.0 0.027 14.2 0.0 2.2 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.2 gi|21226828|ref|NP_632750.1| - 0.00033 20.1 0.0 0.00046 19.6 0.0 1.4 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein PBP_like PF12727.2 gi|21226828|ref|NP_632750.1| - 0.0011 17.9 0.1 0.012 14.6 0.0 2.2 1 1 0 1 1 1 1 PBP superfamily domain LysR_substrate PF03466.15 gi|21226828|ref|NP_632750.1| - 0.0032 16.6 0.0 0.011 14.7 0.0 1.9 2 1 0 2 2 2 1 LysR substrate binding domain BPD_transp_1 PF00528.17 gi|21226829|ref|NP_632751.1| - 1.5e-20 73.4 12.6 2e-20 73.1 8.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|21226830|ref|NP_632752.1| - 4.9e-28 98.1 0.0 8.7e-28 97.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226830|ref|NP_632752.1| - 5.5e-13 49.5 0.1 2.1e-10 41.0 0.1 2.2 1 1 0 1 1 1 1 AAA domain TOBE_2 PF08402.5 gi|21226830|ref|NP_632752.1| - 1.6e-10 40.8 0.0 3.4e-10 39.7 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_15 PF13175.1 gi|21226830|ref|NP_632752.1| - 0.00014 21.0 0.0 0.39 9.7 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21226830|ref|NP_632752.1| - 0.0007 19.7 0.1 0.0064 16.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|21226830|ref|NP_632752.1| - 0.002 17.4 0.0 0.42 9.8 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|21226830|ref|NP_632752.1| - 0.036 13.9 0.3 0.32 10.9 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.1 gi|21226830|ref|NP_632752.1| - 0.048 13.9 0.0 0.081 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|21226830|ref|NP_632752.1| - 0.063 13.5 0.2 1.2 9.4 0.1 2.6 2 1 0 2 2 2 0 AAA domain TOBE PF03459.12 gi|21226830|ref|NP_632752.1| - 0.064 13.3 0.0 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 TOBE domain AAA_17 PF13207.1 gi|21226830|ref|NP_632752.1| - 0.075 13.8 0.1 0.39 11.5 0.1 2.2 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|21226830|ref|NP_632752.1| - 0.11 12.0 0.1 0.22 11.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain PEPCK_ATP PF01293.15 gi|21226830|ref|NP_632752.1| - 0.12 10.8 0.4 0.19 10.1 0.3 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase AAA_19 PF13245.1 gi|21226830|ref|NP_632752.1| - 0.14 11.9 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain SBP_bac_3 PF00497.15 gi|21226831|ref|NP_632753.1| - 1.9e-48 164.6 2.5 2.5e-25 89.0 0.4 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 Cache_2 PF08269.6 gi|21226831|ref|NP_632753.1| - 1.4e-34 117.9 0.9 4.7e-14 52.1 0.0 3.9 4 0 0 4 4 4 3 Cache domain Methyltransf_31 PF13847.1 gi|21226832|ref|NP_632754.1| - 1.5e-24 86.3 0.0 2.1e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226832|ref|NP_632754.1| - 1.9e-23 82.7 0.0 3.3e-23 82.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226832|ref|NP_632754.1| - 1.6e-17 63.4 0.0 6e-17 61.5 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21226832|ref|NP_632754.1| - 1.6e-16 60.5 0.0 2.5e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226832|ref|NP_632754.1| - 2.7e-16 59.6 0.0 4.9e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226832|ref|NP_632754.1| - 3.6e-15 56.5 0.0 5.5e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226832|ref|NP_632754.1| - 3.3e-14 53.0 0.0 5.6e-14 52.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21226832|ref|NP_632754.1| - 1.2e-10 41.0 0.0 1.8e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|21226832|ref|NP_632754.1| - 6.8e-10 38.3 0.0 2.7e-09 36.3 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_26 PF13659.1 gi|21226832|ref|NP_632754.1| - 8.2e-08 32.2 0.0 1.5e-07 31.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21226832|ref|NP_632754.1| - 1.2e-05 24.5 0.0 1.7e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.1 gi|21226832|ref|NP_632754.1| - 3.1e-05 23.6 0.0 4.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|21226832|ref|NP_632754.1| - 6.5e-05 22.6 0.0 0.00044 19.9 0.0 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase FmrO PF07091.6 gi|21226832|ref|NP_632754.1| - 0.00014 20.9 0.0 0.00021 20.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Methyltransf_9 PF08003.6 gi|21226832|ref|NP_632754.1| - 0.0002 20.1 0.0 0.00026 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) UPF0020 PF01170.13 gi|21226832|ref|NP_632754.1| - 0.00051 19.6 0.0 0.00093 18.8 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|21226832|ref|NP_632754.1| - 0.00086 18.5 0.0 0.0012 18.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.14 gi|21226832|ref|NP_632754.1| - 0.00088 18.8 0.0 0.0014 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_29 PF03141.11 gi|21226832|ref|NP_632754.1| - 0.0013 17.1 0.0 0.0016 16.8 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF938 PF06080.7 gi|21226832|ref|NP_632754.1| - 0.086 12.3 0.0 0.23 10.9 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF938) RrnaAD PF00398.15 gi|21226832|ref|NP_632754.1| - 0.098 11.6 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase UPF0066 PF01980.11 gi|21226832|ref|NP_632754.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0066 MetW PF07021.7 gi|21226832|ref|NP_632754.1| - 0.14 11.4 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW P-II PF00543.17 gi|21226834|ref|NP_632756.1| - 8.2e-33 112.9 0.2 9.3e-33 112.7 0.1 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.16 gi|21226835|ref|NP_632757.1| - 1.9e-118 395.4 39.9 2.1e-118 395.2 27.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family CD99L2 PF12301.3 gi|21226835|ref|NP_632757.1| - 0.065 12.9 0.5 0.13 11.9 0.3 1.5 1 0 0 1 1 1 0 CD99 antigen like protein 2 DUF2627 PF11118.3 gi|21226835|ref|NP_632757.1| - 8.9 6.4 13.6 5.4 7.1 0.3 4.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2627) Wyosine_form PF08608.7 gi|21226836|ref|NP_632758.1| - 0.019 15.0 0.1 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Wyosine base formation NUC130_3NT PF08158.7 gi|21226836|ref|NP_632758.1| - 0.11 12.8 0.1 1.6 9.0 0.0 2.3 1 1 1 2 2 2 0 NUC130/3NT domain UPF0060 PF02694.10 gi|21226837|ref|NP_632759.1| - 1.2e-12 47.7 0.8 1.4e-12 47.5 0.6 1.2 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family DUF3925 PF13063.1 gi|21226837|ref|NP_632759.1| - 3.7 7.6 6.0 4.8 7.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3925) DUF318 PF03773.8 gi|21226838|ref|NP_632760.1| - 4.5e-84 282.0 28.5 5.9e-84 281.6 19.7 1.1 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.1 gi|21226839|ref|NP_632761.1| - 9.1e-31 105.5 1.5 1e-30 105.3 1.0 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|21226839|ref|NP_632761.1| - 1.4e-05 24.9 0.5 2.5e-05 24.1 0.3 1.4 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.15 gi|21226839|ref|NP_632761.1| - 0.047 13.3 0.3 0.05 13.2 0.2 1.1 1 0 0 1 1 1 0 Thioredoxin DUF150 PF02576.12 gi|21226839|ref|NP_632761.1| - 0.052 13.1 0.0 0.067 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YhbC family COG0779 Thioredoxin_4 PF13462.1 gi|21226839|ref|NP_632761.1| - 0.067 13.1 0.6 2.2 8.2 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin Ribosomal_S24e PF01282.14 gi|21226839|ref|NP_632761.1| - 0.071 12.9 0.4 0.43 10.3 0.1 1.9 1 1 1 2 2 2 0 Ribosomal protein S24e DGC PF08859.6 gi|21226840|ref|NP_632762.1| - 2.3e-38 130.4 0.7 2.8e-38 130.1 0.5 1.1 1 0 0 1 1 1 1 DGC domain DDE_Tnp_IS66 PF03050.9 gi|21226841|ref|NP_632763.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21226841|ref|NP_632763.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21226841|ref|NP_632763.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21226841|ref|NP_632763.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21226841|ref|NP_632763.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21226841|ref|NP_632763.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain DnaB_C PF03796.10 gi|21226842|ref|NP_632764.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21226842|ref|NP_632764.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21226842|ref|NP_632764.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21226842|ref|NP_632764.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Usp PF00582.21 gi|21226843|ref|NP_632765.1| - 6.8e-46 155.9 0.3 3.6e-24 85.5 0.0 2.1 2 0 0 2 2 2 2 Universal stress protein family ArsA_ATPase PF02374.10 gi|21226843|ref|NP_632765.1| - 0.028 13.4 0.2 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase SBF PF01758.11 gi|21226844|ref|NP_632766.1| - 3.5e-42 143.9 24.2 3.5e-42 143.9 16.8 2.4 3 0 0 3 3 3 2 Sodium Bile acid symporter family CMD PF02627.15 gi|21226845|ref|NP_632767.1| - 5.3e-25 87.0 0.1 6.1e-25 86.8 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Methyltransf_12 PF08242.7 gi|21226847|ref|NP_632769.1| - 5.6e-14 52.4 0.0 1.1e-13 51.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226847|ref|NP_632769.1| - 2.6e-13 50.2 0.0 4.7e-13 49.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226847|ref|NP_632769.1| - 8.5e-13 48.1 0.0 1.4e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226847|ref|NP_632769.1| - 2.8e-12 47.2 0.1 4.8e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21226847|ref|NP_632769.1| - 3.2e-12 46.1 0.1 1.1e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.1 gi|21226847|ref|NP_632769.1| - 1.1e-11 44.6 0.0 1.7e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226847|ref|NP_632769.1| - 2.4e-10 39.9 0.0 3.6e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|21226847|ref|NP_632769.1| - 3.3e-09 36.9 0.0 7.4e-09 35.8 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain MTS PF05175.9 gi|21226847|ref|NP_632769.1| - 3.5e-07 29.7 0.0 6.4e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|21226847|ref|NP_632769.1| - 8.7e-06 25.0 0.0 1.1e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_26 PF13659.1 gi|21226847|ref|NP_632769.1| - 0.0014 18.6 0.0 0.0033 17.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|21226847|ref|NP_632769.1| - 0.0015 17.9 0.0 0.0022 17.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.14 gi|21226847|ref|NP_632769.1| - 0.0016 18.0 0.0 0.0022 17.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|21226847|ref|NP_632769.1| - 0.0016 17.5 0.0 0.0034 16.4 0.0 1.6 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_PK PF05891.7 gi|21226847|ref|NP_632769.1| - 0.004 16.4 0.0 0.006 15.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Pox_MCEL PF03291.11 gi|21226847|ref|NP_632769.1| - 0.0063 15.4 0.0 0.023 13.5 0.0 1.9 1 1 0 1 1 1 1 mRNA capping enzyme PrmA PF06325.8 gi|21226847|ref|NP_632769.1| - 0.0084 15.2 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_2 PF00891.13 gi|21226847|ref|NP_632769.1| - 0.037 13.2 0.0 0.11 11.6 0.0 1.7 1 1 0 1 1 1 0 O-methyltransferase TPMT PF05724.6 gi|21226847|ref|NP_632769.1| - 0.055 12.8 0.0 0.089 12.2 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) tRNA_U5-meth_tr PF05958.6 gi|21226847|ref|NP_632769.1| - 0.093 11.4 0.0 0.13 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Mis12 PF05859.7 gi|21226848|ref|NP_632770.1| - 0.054 13.3 0.1 0.09 12.5 0.1 1.3 1 0 0 1 1 1 0 Mis12 protein SF-assemblin PF06705.6 gi|21226848|ref|NP_632770.1| - 0.062 12.4 0.1 0.41 9.7 0.1 1.9 1 1 0 1 1 1 0 SF-assemblin/beta giardin DEAD PF00270.24 gi|21226849|ref|NP_632771.1| - 6e-48 162.5 0.3 2e-47 160.8 0.0 1.9 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21226849|ref|NP_632771.1| - 5.4e-29 99.8 0.0 1.4e-28 98.5 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DbpA PF03880.10 gi|21226849|ref|NP_632771.1| - 4.9e-13 48.5 0.0 3.3e-12 45.9 0.0 2.5 2 0 0 2 2 2 1 DbpA RNA binding domain ResIII PF04851.10 gi|21226849|ref|NP_632771.1| - 0.00011 22.0 0.0 0.00036 20.4 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.1 gi|21226849|ref|NP_632771.1| - 0.0016 17.5 0.9 0.003 16.6 0.0 1.9 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit AAA_30 PF13604.1 gi|21226849|ref|NP_632771.1| - 0.008 15.7 0.0 0.022 14.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21226849|ref|NP_632771.1| - 0.069 12.9 0.3 2.4 7.9 0.0 2.8 3 0 0 3 3 3 0 Part of AAA domain Methyltransf_12 PF08242.7 gi|21226850|ref|NP_632772.1| - 2.1e-17 63.4 0.0 3.1e-17 62.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226850|ref|NP_632772.1| - 1.9e-13 50.9 0.0 3e-13 50.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226850|ref|NP_632772.1| - 7.9e-12 45.4 0.0 1.6e-11 44.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226850|ref|NP_632772.1| - 8.6e-10 38.9 0.0 1.3e-09 38.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226850|ref|NP_632772.1| - 2.2e-09 37.0 0.0 2.9e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21226850|ref|NP_632772.1| - 9.4e-08 31.9 0.0 1.2e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226850|ref|NP_632772.1| - 2.9e-07 29.8 0.0 4.4e-07 29.2 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family ResIII PF04851.10 gi|21226850|ref|NP_632772.1| - 5.7e-05 23.0 0.0 0.00012 22.0 0.0 1.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Methyltransf_26 PF13659.1 gi|21226850|ref|NP_632772.1| - 0.013 15.5 0.0 0.028 14.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.14 gi|21226850|ref|NP_632772.1| - 0.057 12.6 0.0 0.083 12.1 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family CMAS PF02353.15 gi|21226850|ref|NP_632772.1| - 0.068 12.2 0.0 0.092 11.8 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|21226850|ref|NP_632772.1| - 0.086 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain ADH_N PF08240.7 gi|21226851|ref|NP_632773.1| - 4.5e-27 93.9 0.2 7e-27 93.3 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.1 gi|21226851|ref|NP_632773.1| - 1.4e-12 47.0 0.3 2.6e-11 42.9 0.7 2.5 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.21 gi|21226851|ref|NP_632773.1| - 0.00019 20.9 0.0 0.0017 17.9 0.0 2.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Methyltransf_18 PF12847.2 gi|21226851|ref|NP_632773.1| - 0.0076 16.8 0.0 0.018 15.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Hydantoinase_A PF01968.13 gi|21226852|ref|NP_632774.1| - 4.4e-83 278.7 1.5 1.8e-82 276.7 0.1 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21226852|ref|NP_632774.1| - 6.7e-43 146.2 0.1 2.1e-40 138.1 0.0 2.7 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21226852|ref|NP_632774.1| - 6.2e-06 24.8 1.1 0.0048 15.2 0.1 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21226852|ref|NP_632774.1| - 0.066 12.4 0.9 0.29 10.3 0.0 2.4 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Metallophos_2 PF12850.2 gi|21226853|ref|NP_632775.1| - 1.1e-29 103.2 0.0 1.4e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21226853|ref|NP_632775.1| - 1.5e-13 50.6 0.2 2.4e-13 49.9 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.6 gi|21226853|ref|NP_632775.1| - 0.0045 15.1 0.3 0.13 10.2 0.0 2.1 1 1 1 2 2 2 2 Firmicute fructose-1,6-bisphosphatase tRNA_m1G_MT PF01746.16 gi|21226853|ref|NP_632775.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 tRNA (Guanine-1)-methyltransferase Metallophos_2 PF12850.2 gi|21226854|ref|NP_632776.1| - 1.1e-26 93.5 0.1 1.3e-26 93.2 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21226854|ref|NP_632776.1| - 8.2e-06 25.3 0.9 0.00055 19.3 0.7 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|21226854|ref|NP_632776.1| - 0.00059 19.0 0.1 0.47 9.5 0.1 2.1 2 0 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily QueC PF06508.8 gi|21226855|ref|NP_632777.1| - 1e-59 201.3 0.0 1.2e-59 201.1 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|21226855|ref|NP_632777.1| - 9.3e-05 21.9 0.0 0.0072 15.7 0.0 2.4 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.16 gi|21226855|ref|NP_632777.1| - 0.00072 19.1 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.15 gi|21226855|ref|NP_632777.1| - 0.0013 18.2 0.0 0.0044 16.5 0.0 1.8 2 0 0 2 2 2 1 PP-loop family Fer2 PF00111.22 gi|21226855|ref|NP_632777.1| - 0.059 13.1 0.2 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain NAD_synthase PF02540.12 gi|21226855|ref|NP_632777.1| - 0.064 12.1 0.1 0.11 11.3 0.0 1.4 2 0 0 2 2 2 0 NAD synthase tRNA_Me_trans PF03054.11 gi|21226855|ref|NP_632777.1| - 0.12 10.9 0.1 0.47 8.9 0.0 1.8 2 0 0 2 2 2 0 tRNA methyl transferase DUF366 PF04017.7 gi|21226856|ref|NP_632778.1| - 1.1e-74 249.7 0.5 1.2e-74 249.5 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) Tox-PL-2 PF15643.1 gi|21226856|ref|NP_632778.1| - 0.0014 18.5 0.0 0.0022 17.9 0.0 1.4 1 0 0 1 1 1 1 Papain fold toxin 2 Fer4_14 PF13394.1 gi|21226857|ref|NP_632779.1| - 5e-14 52.3 0.0 8.5e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|21226857|ref|NP_632779.1| - 6.2e-13 49.2 0.0 9.2e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21226857|ref|NP_632779.1| - 2.6e-08 34.0 0.0 3.5e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.14 gi|21226858|ref|NP_632780.1| - 2.9e-29 101.2 0.0 3.5e-29 101.0 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.16 gi|21226859|ref|NP_632781.1| - 4.2e-20 72.5 0.1 6.7e-20 71.9 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21226859|ref|NP_632781.1| - 1.7e-05 24.8 0.2 5.3e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21226859|ref|NP_632781.1| - 0.0003 20.9 0.0 0.00066 19.7 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|21226861|ref|NP_632783.1| - 1.5e-18 67.5 0.1 2.3e-18 66.9 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21226861|ref|NP_632783.1| - 3.8e-05 23.6 0.0 9.7e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21226861|ref|NP_632783.1| - 0.00028 21.0 0.0 0.00074 19.6 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4 PF00037.22 gi|21226862|ref|NP_632784.1| - 6.4e-19 66.7 19.7 7.6e-10 37.9 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226862|ref|NP_632784.1| - 2.7e-15 55.8 24.0 7e-11 41.7 9.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226862|ref|NP_632784.1| - 1.4e-14 53.1 19.6 1.1e-07 31.3 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21226862|ref|NP_632784.1| - 1.8e-13 49.5 18.2 1.3e-06 27.9 3.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21226862|ref|NP_632784.1| - 5e-13 49.2 13.1 6.4e-13 48.8 9.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21226862|ref|NP_632784.1| - 4.2e-12 46.1 11.4 5e-12 45.9 7.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226862|ref|NP_632784.1| - 2.1e-10 41.1 10.9 3.6e-05 24.4 1.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21226862|ref|NP_632784.1| - 5.1e-10 38.8 13.1 9e-05 22.4 2.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21226862|ref|NP_632784.1| - 2.3e-09 36.9 12.9 3.4e-09 36.4 9.0 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226862|ref|NP_632784.1| - 4.7e-09 36.1 11.2 1.2e-08 34.8 7.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21226862|ref|NP_632784.1| - 8e-07 29.5 19.0 0.00012 22.6 3.5 2.2 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21226862|ref|NP_632784.1| - 1.2e-06 28.7 12.3 0.0033 17.7 1.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21226862|ref|NP_632784.1| - 3.2e-06 27.2 22.2 0.0014 18.9 5.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21226862|ref|NP_632784.1| - 6.3e-06 26.4 18.2 0.0024 18.2 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21226862|ref|NP_632784.1| - 2.2e-05 24.7 17.3 0.0047 17.3 2.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21226862|ref|NP_632784.1| - 3.2e-05 23.7 5.2 3.2e-05 23.7 3.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|21226862|ref|NP_632784.1| - 0.14 12.0 7.5 0.22 11.3 5.2 1.5 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster DUF164 PF02591.10 gi|21226862|ref|NP_632784.1| - 1.4 8.7 6.6 4.2 7.2 4.6 1.8 1 1 0 1 1 1 0 Putative zinc ribbon domain AIRS PF00586.19 gi|21226863|ref|NP_632785.1| - 4.7e-20 71.6 1.4 1.1e-19 70.4 1.0 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|21226863|ref|NP_632785.1| - 5.7e-15 55.6 0.0 1e-14 54.7 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain SH3_3 PF08239.6 gi|21226863|ref|NP_632785.1| - 0.013 15.6 0.1 15 5.8 0.0 3.1 3 0 0 3 3 3 0 Bacterial SH3 domain Urease_alpha PF00449.15 gi|21226865|ref|NP_632787.1| - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain DUF98 PF01947.11 gi|21226866|ref|NP_632788.1| - 1.4e-16 60.5 0.0 1.8e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF98) UTRA PF07702.8 gi|21226866|ref|NP_632788.1| - 3.5e-06 26.6 0.1 4.5e-06 26.3 0.1 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.8 gi|21226866|ref|NP_632788.1| - 0.01 15.2 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase TPR_2 PF07719.12 gi|21226867|ref|NP_632789.1| - 1.1e-06 28.1 0.0 2.2e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21226867|ref|NP_632789.1| - 1.7e-05 24.1 0.0 3.6e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21226867|ref|NP_632789.1| - 0.00042 19.9 0.0 0.00086 18.9 0.0 1.5 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.1 gi|21226867|ref|NP_632789.1| - 0.0018 17.9 0.0 0.0046 16.6 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21226867|ref|NP_632789.1| - 0.0023 17.1 0.0 0.0042 16.3 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_12 PF13424.1 gi|21226867|ref|NP_632789.1| - 0.0062 16.4 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat PQQ_2 PF13360.1 gi|21226867|ref|NP_632789.1| - 0.021 14.2 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 PQQ-like domain TPR_16 PF13432.1 gi|21226867|ref|NP_632789.1| - 0.13 13.0 0.0 0.25 12.0 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat OrfB_Zn_ribbon PF07282.6 gi|21226868|ref|NP_632790.1| - 9.6e-26 89.2 0.4 2e-25 88.2 0.2 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.14 gi|21226868|ref|NP_632790.1| - 2.7e-17 62.9 0.5 4.7e-17 62.1 0.3 1.5 1 1 0 1 1 1 1 Probable transposase C1_3 PF07649.7 gi|21226868|ref|NP_632790.1| - 0.0077 16.2 1.6 0.015 15.3 1.1 1.5 1 0 0 1 1 1 1 C1-like domain C1_1 PF00130.17 gi|21226868|ref|NP_632790.1| - 0.021 14.5 1.0 0.048 13.3 0.7 1.5 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.11 gi|21226868|ref|NP_632790.1| - 0.34 11.0 4.1 1.1 9.4 2.8 2.0 1 1 0 1 1 1 0 C1 domain zf-ribbon_3 PF13248.1 gi|21226869|ref|NP_632791.1| - 0.0079 15.3 2.2 0.45 9.7 0.2 2.9 3 0 0 3 3 3 1 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|21226869|ref|NP_632791.1| - 0.0083 15.7 3.5 1.4 8.6 0.2 3.0 3 0 0 3 3 3 2 Nudix N-terminal DZR PF12773.2 gi|21226869|ref|NP_632791.1| - 0.015 15.0 2.4 0.015 15.0 1.7 2.8 1 1 1 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21226869|ref|NP_632791.1| - 0.024 14.0 2.8 1.9 8.0 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf-dskA_traR PF01258.12 gi|21226869|ref|NP_632791.1| - 0.051 13.3 12.1 5.8 6.7 0.0 4.2 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger DUF2175 PF09943.4 gi|21226869|ref|NP_632791.1| - 0.069 13.2 3.2 0.3 11.1 0.2 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) zf-NADH-PPase PF09297.6 gi|21226869|ref|NP_632791.1| - 0.094 12.2 2.1 0.22 11.0 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-CCHC_4 PF14392.1 gi|21226869|ref|NP_632791.1| - 0.44 10.2 6.5 0.9 9.2 0.8 2.7 2 0 0 2 2 2 0 Zinc knuckle NOB1_Zn_bind PF08772.6 gi|21226869|ref|NP_632791.1| - 0.47 10.3 6.5 2.2 8.1 0.0 2.8 3 0 0 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zf-RING_5 PF14634.1 gi|21226869|ref|NP_632791.1| - 0.8 9.4 8.1 9.1 6.1 0.4 3.3 3 0 0 3 3 3 0 zinc-RING finger domain A2L_zn_ribbon PF08792.5 gi|21226869|ref|NP_632791.1| - 2.3 7.7 12.0 3.4 7.2 0.1 3.9 4 0 0 4 4 4 0 A2L zinc ribbon domain FYVE PF01363.16 gi|21226869|ref|NP_632791.1| - 2.5 8.0 5.4 18 5.2 3.7 2.3 1 1 0 1 1 1 0 FYVE zinc finger Cys_rich_CWC PF14375.1 gi|21226869|ref|NP_632791.1| - 5.5 6.9 8.0 1.1 9.2 1.0 3.0 3 1 0 3 3 3 0 Cysteine-rich CWC ATPgrasp_TupA PF14305.1 gi|21226870|ref|NP_632792.1| - 4.9e-98 327.2 0.7 5.8e-98 326.9 0.5 1.1 1 0 0 1 1 1 1 TupA-like ATPgrasp Metallophos_2 PF12850.2 gi|21226871|ref|NP_632793.1| - 0.0033 17.2 0.0 0.0041 16.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DHHA1 PF02272.14 gi|21226872|ref|NP_632794.1| - 1.3e-05 24.8 0.0 2.5e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|21226872|ref|NP_632794.1| - 0.089 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 DHH family DDE_Tnp_1 PF01609.16 gi|21226873|ref|NP_632795.1| - 4.8e-12 45.8 0.8 2.4e-11 43.5 0.6 2.0 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.6 gi|21226873|ref|NP_632795.1| - 0.075 13.0 1.1 12 5.9 0.0 2.8 2 0 0 2 2 2 0 TnsA endonuclease N terminal DUF1699 PF08004.6 gi|21226874|ref|NP_632796.1| - 1.2e-68 228.6 0.8 1.4e-68 228.4 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PAM2 PF07145.10 gi|21226874|ref|NP_632796.1| - 0.083 12.4 0.1 12 5.6 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region LKAAEAR PF15478.1 gi|21226874|ref|NP_632796.1| - 0.1 12.8 0.1 0.31 11.3 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif ChaB PF06150.7 gi|21226875|ref|NP_632797.1| - 2.5e-27 94.4 2.0 3e-27 94.1 1.4 1.1 1 0 0 1 1 1 1 ChaB Chorismate_synt PF01264.16 gi|21226875|ref|NP_632797.1| - 0.0098 14.4 0.0 0.011 14.2 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase HYLS1_C PF15311.1 gi|21226875|ref|NP_632797.1| - 0.087 13.0 1.5 0.13 12.4 1.0 1.4 1 1 0 1 1 1 0 Hydrolethalus syndrome protein 1 C-terminus DUF1699 PF08004.6 gi|21226876|ref|NP_632798.1| - 5.6e-69 229.7 2.3 6.2e-69 229.5 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21226876|ref|NP_632798.1| - 0.048 13.9 0.2 0.085 13.1 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|21226876|ref|NP_632798.1| - 0.086 12.3 0.2 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region Img2 PF05046.9 gi|21226876|ref|NP_632798.1| - 0.12 12.6 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Reo_sigmaC PF04582.7 gi|21226877|ref|NP_632799.1| - 2.1e-11 43.5 14.8 4e-05 22.9 1.3 3.2 2 1 0 3 3 3 3 Reovirus sigma C capsid protein ATG16 PF08614.6 gi|21226877|ref|NP_632799.1| - 6.3e-08 32.6 69.0 0.0036 17.1 9.1 5.7 1 1 4 5 5 5 4 Autophagy protein 16 (ATG16) Fib_alpha PF08702.5 gi|21226877|ref|NP_632799.1| - 1.3e-06 28.6 44.5 0.0097 16.0 2.1 6.1 1 1 5 6 6 6 5 Fibrinogen alpha/beta chain family SlyX PF04102.7 gi|21226877|ref|NP_632799.1| - 1e-05 25.8 48.0 0.011 16.1 1.7 7.2 1 1 8 9 9 9 5 SlyX IncA PF04156.9 gi|21226877|ref|NP_632799.1| - 7e-05 22.4 77.6 0.26 10.8 19.6 4.1 1 1 2 3 3 3 1 IncA protein AAA_13 PF13166.1 gi|21226877|ref|NP_632799.1| - 9.2e-05 21.1 57.8 0.00038 19.0 16.6 3.0 1 1 2 3 3 3 2 AAA domain DUF641 PF04859.7 gi|21226877|ref|NP_632799.1| - 0.003 17.3 55.1 0.097 12.4 0.7 7.7 1 1 6 8 8 8 3 Plant protein of unknown function (DUF641) TPR_7 PF13176.1 gi|21226877|ref|NP_632799.1| - 0.0037 16.9 0.6 0.16 11.8 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat HOOK PF05622.7 gi|21226877|ref|NP_632799.1| - 0.12 10.2 64.1 0.091 10.5 20.1 3.4 1 1 2 3 3 3 0 HOOK protein Nsp1_C PF05064.8 gi|21226877|ref|NP_632799.1| - 0.14 11.7 45.2 0.29 10.8 1.9 5.2 1 1 4 5 5 5 0 Nsp1-like C-terminal region Tropomyosin PF00261.15 gi|21226877|ref|NP_632799.1| - 0.15 11.1 81.8 2.9 6.9 13.7 3.3 1 1 2 3 3 3 0 Tropomyosin Phage_GP20 PF06810.6 gi|21226877|ref|NP_632799.1| - 0.21 11.0 63.4 0.24 10.8 6.3 6.0 1 1 4 5 5 5 0 Phage minor structural protein GP20 ERM PF00769.14 gi|21226877|ref|NP_632799.1| - 0.33 10.4 70.5 0.017 14.6 14.1 4.0 1 1 3 4 4 4 0 Ezrin/radixin/moesin family Spc7 PF08317.6 gi|21226877|ref|NP_632799.1| - 0.41 9.2 72.3 0.065 11.8 12.1 4.2 1 1 5 6 6 6 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.4 gi|21226877|ref|NP_632799.1| - 0.48 10.2 84.0 2.9 7.7 8.7 4.9 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4201 PF13870.1 gi|21226877|ref|NP_632799.1| - 0.48 9.8 64.6 0.015 14.7 6.3 5.3 1 1 3 5 5 5 0 Domain of unknown function (DUF4201) Lebercilin PF15619.1 gi|21226877|ref|NP_632799.1| - 0.79 9.1 64.1 0.082 12.3 13.6 3.8 1 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Mod_r PF07200.8 gi|21226877|ref|NP_632799.1| - 0.99 9.3 55.5 2.8 7.8 2.8 4.8 1 1 3 5 5 5 0 Modifier of rudimentary (Mod(r)) protein Rnk_N PF14760.1 gi|21226877|ref|NP_632799.1| - 1.2 9.3 7.1 15 5.7 0.0 3.8 3 0 0 3 3 3 0 Rnk N-terminus DUF3552 PF12072.3 gi|21226877|ref|NP_632799.1| - 2.5 7.2 84.3 0.019 14.1 6.2 5.5 1 1 6 7 7 7 0 Domain of unknown function (DUF3552) Cast PF10174.4 gi|21226877|ref|NP_632799.1| - 4.2 5.2 73.8 0.023 12.7 16.1 2.8 1 1 1 2 2 2 0 RIM-binding protein of the cytomatrix active zone DUF228 PF02989.9 gi|21226877|ref|NP_632799.1| - 4.6 6.7 12.2 0.6 9.6 0.9 3.7 3 1 1 4 4 4 0 Lyme disease proteins of unknown function NPV_P10 PF05531.7 gi|21226877|ref|NP_632799.1| - 6 7.2 20.5 11 6.3 0.8 5.6 3 2 3 6 6 5 0 Nucleopolyhedrovirus P10 protein DUF1699 PF08004.6 gi|21226878|ref|NP_632800.1| - 1.9e-54 182.7 0.1 2.1e-54 182.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Sua5_yciO_yrdC PF01300.13 gi|21226879|ref|NP_632801.1| - 8.9e-45 152.1 0.0 1.6e-44 151.2 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.7 gi|21226879|ref|NP_632801.1| - 1e-32 111.1 17.9 1.8e-17 62.4 3.6 2.4 2 0 0 2 2 2 2 HypF finger Acylphosphatase PF00708.13 gi|21226879|ref|NP_632801.1| - 2.6e-23 81.9 0.0 6.3e-23 80.6 0.0 1.7 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.20 gi|21226879|ref|NP_632801.1| - 0.016 14.7 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family FYDLN_acid PF09538.5 gi|21226879|ref|NP_632801.1| - 0.47 11.0 2.0 0.35 11.4 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) DUF4379 PF14311.1 gi|21226879|ref|NP_632801.1| - 0.58 10.0 4.3 1.5 8.6 3.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4379) Cys_rich_KTR PF14205.1 gi|21226879|ref|NP_632801.1| - 1.7 8.1 6.6 1.4 8.4 1.2 2.6 2 0 0 2 2 2 0 Cysteine-rich KTR ATP-synt_D PF01813.12 gi|21226880|ref|NP_632802.1| - 3.1e-64 216.1 7.2 3.5e-64 215.9 5.0 1.0 1 0 0 1 1 1 1 ATP synthase subunit D PP_kinase_C PF13090.1 gi|21226880|ref|NP_632802.1| - 0.015 13.9 0.1 0.02 13.4 0.1 1.3 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain Ead_Ea22 PF13935.1 gi|21226880|ref|NP_632802.1| - 0.059 13.6 0.8 0.1 12.9 0.1 1.7 1 1 1 2 2 2 0 Ead/Ea22-like protein Syntaxin_2 PF14523.1 gi|21226880|ref|NP_632802.1| - 0.1 12.6 1.5 2.2 8.3 0.1 2.2 2 0 0 2 2 2 0 Syntaxin-like protein ATP-synt_ab PF00006.20 gi|21226881|ref|NP_632803.1| - 1.2e-59 201.4 0.0 1.5e-59 201.0 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|21226881|ref|NP_632803.1| - 8.7e-17 61.6 0.0 1.6e-16 60.7 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|21226881|ref|NP_632803.1| - 4.8e-13 49.1 2.2 4.8e-13 49.1 1.5 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|21226881|ref|NP_632803.1| - 1.8e-05 24.5 0.6 5e-05 23.1 0.4 1.8 1 0 0 1 1 1 1 HAS barrel domain DUF561 PF04481.7 gi|21226881|ref|NP_632803.1| - 0.015 14.2 0.0 0.025 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP-synt_ab PF00006.20 gi|21226882|ref|NP_632804.1| - 6.7e-97 323.1 0.0 1e-96 322.5 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|21226882|ref|NP_632804.1| - 1.4e-20 73.8 1.0 2.9e-20 72.8 0.7 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|21226882|ref|NP_632804.1| - 3.3e-11 43.2 2.4 1.5e-10 41.1 1.3 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.1 gi|21226882|ref|NP_632804.1| - 0.0025 17.4 0.2 0.0069 16.0 0.1 1.7 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain DUF1932 PF09130.6 gi|21226882|ref|NP_632804.1| - 0.11 12.2 1.9 1.5 8.5 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1932) ATP-synt_F PF01990.12 gi|21226883|ref|NP_632805.1| - 5.7e-17 61.8 0.0 6.5e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit SOCS PF12610.3 gi|21226883|ref|NP_632805.1| - 0.16 12.3 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 Suppressor of cytokine signalling vATP-synt_AC39 PF01992.11 gi|21226884|ref|NP_632806.1| - 3e-116 388.2 7.9 3.4e-116 388.0 5.5 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit DUF4391 PF14335.1 gi|21226884|ref|NP_632806.1| - 0.037 13.4 0.2 0.062 12.6 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) vATP-synt_E PF01991.13 gi|21226885|ref|NP_632807.1| - 3e-39 134.3 15.6 9e-39 132.7 10.8 1.6 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit V-ATPase_G PF03179.10 gi|21226885|ref|NP_632807.1| - 0.19 12.0 8.2 0.16 12.3 4.4 1.8 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.13 gi|21226885|ref|NP_632807.1| - 0.5 10.1 11.1 0.3 10.9 5.8 2.0 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Prominin PF05478.6 gi|21226885|ref|NP_632807.1| - 0.81 7.1 5.0 0.98 6.8 3.4 1.1 1 0 0 1 1 1 0 Prominin ATP-synt_C PF00137.16 gi|21226886|ref|NP_632808.1| - 3.1e-17 62.2 10.9 3.7e-17 61.9 7.6 1.1 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.12 gi|21226886|ref|NP_632808.1| - 0.011 15.1 0.5 0.012 15.0 0.3 1.2 1 0 0 1 1 1 0 Competence-damaged protein TraT PF05818.7 gi|21226886|ref|NP_632808.1| - 0.36 10.2 4.1 0.38 10.1 2.8 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein V_ATPase_I PF01496.14 gi|21226887|ref|NP_632809.1| - 1.1e-148 496.3 8.3 6.1e-114 381.5 1.1 2.2 1 1 0 2 2 2 2 V-type ATPase 116kDa subunit family MerR-DNA-bind PF09278.6 gi|21226887|ref|NP_632809.1| - 0.0076 16.6 0.9 5.2 7.5 0.1 3.5 3 0 0 3 3 3 1 MerR, DNA binding Vps51 PF08700.6 gi|21226887|ref|NP_632809.1| - 0.027 14.3 1.8 1 9.2 0.1 2.7 2 1 0 2 2 2 0 Vps51/Vps67 FimP PF09766.4 gi|21226887|ref|NP_632809.1| - 0.043 12.8 0.3 0.075 12.0 0.2 1.3 1 0 0 1 1 1 0 Fms-interacting protein Spc7 PF08317.6 gi|21226887|ref|NP_632809.1| - 0.071 11.7 3.6 0.022 13.4 0.4 1.6 2 0 0 2 2 2 0 Spc7 kinetochore protein Cortex-I_coil PF09304.5 gi|21226887|ref|NP_632809.1| - 0.091 12.8 3.4 2.5 8.1 0.0 2.3 2 0 0 2 2 2 0 Cortexillin I, coiled coil DivIC PF04977.10 gi|21226887|ref|NP_632809.1| - 0.19 11.2 4.6 5.5 6.5 1.1 2.7 2 0 0 2 2 2 0 Septum formation initiator DUF4140 PF13600.1 gi|21226887|ref|NP_632809.1| - 0.33 11.4 1.5 1.2 9.5 0.3 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF3972 PF13118.1 gi|21226887|ref|NP_632809.1| - 0.42 10.6 3.5 0.55 10.3 0.8 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3972) DUF904 PF06005.7 gi|21226887|ref|NP_632809.1| - 0.45 10.8 5.5 2.3 8.5 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF904) TMF_DNA_bd PF12329.3 gi|21226887|ref|NP_632809.1| - 0.54 10.0 6.8 0.5 10.2 1.6 2.6 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Fib_alpha PF08702.5 gi|21226887|ref|NP_632809.1| - 1.3 9.1 3.2 7.4 6.6 0.5 2.2 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF4200 PF13863.1 gi|21226887|ref|NP_632809.1| - 4.3 7.3 6.4 2.2 8.2 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Prefoldin_2 PF01920.15 gi|21226887|ref|NP_632809.1| - 6.3 6.6 7.5 5.7 6.7 1.4 2.6 3 0 0 3 3 3 0 Prefoldin subunit V-ATPase_G PF03179.10 gi|21226888|ref|NP_632810.1| - 0.0032 17.7 9.1 0.0038 17.4 6.3 1.1 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.13 gi|21226888|ref|NP_632810.1| - 0.0052 16.5 14.2 0.03 14.1 4.2 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) DUF2259 PF10016.4 gi|21226888|ref|NP_632810.1| - 0.036 13.7 0.2 0.043 13.5 0.1 1.0 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) HrpE PF06188.7 gi|21226888|ref|NP_632810.1| - 0.047 13.4 3.3 0.053 13.2 2.3 1.1 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E DUF3043 PF11241.3 gi|21226888|ref|NP_632810.1| - 0.11 12.0 1.3 0.16 11.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) LemA PF04011.7 gi|21226888|ref|NP_632810.1| - 0.86 8.6 4.3 1.1 8.3 0.2 2.0 1 1 1 2 2 2 0 LemA family DUF4398 PF14346.1 gi|21226888|ref|NP_632810.1| - 1.4 9.0 9.4 0.42 10.6 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4398) Y1_Tnp PF01797.11 gi|21226889|ref|NP_632811.1| - 3.5e-37 126.9 0.8 4.2e-37 126.6 0.5 1.1 1 0 0 1 1 1 1 Transposase IS200 like Radical_SAM PF04055.16 gi|21226890|ref|NP_632812.1| - 4.3e-17 62.7 0.0 8.1e-17 61.8 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.1 gi|21226890|ref|NP_632812.1| - 2.5e-09 37.3 0.1 6.5e-09 36.0 0.1 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|21226890|ref|NP_632812.1| - 0.044 13.9 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain polyprenyl_synt PF00348.12 gi|21226891|ref|NP_632813.1| - 2.6e-45 154.2 0.0 3.4e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase CcmE PF03100.10 gi|21226892|ref|NP_632814.1| - 2.8e-10 39.8 0.0 3.2e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 CcmE tRNA_anti-like PF12869.2 gi|21226892|ref|NP_632814.1| - 0.064 12.7 0.0 0.087 12.3 0.0 1.3 1 0 0 1 1 1 0 tRNA_anti-like Lactamase_B PF00753.22 gi|21226894|ref|NP_632816.1| - 9.1e-09 35.2 0.0 1.1e-07 31.7 0.1 2.2 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily ACT PF01842.20 gi|21226894|ref|NP_632816.1| - 7.3e-07 28.5 0.0 8.4e-06 25.1 0.0 2.5 2 0 0 2 2 2 1 ACT domain Thr_dehydrat_C PF00585.13 gi|21226894|ref|NP_632816.1| - 1.4e-05 24.6 0.0 0.085 12.4 0.0 2.6 1 1 1 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase ACT_4 PF13291.1 gi|21226894|ref|NP_632816.1| - 0.0078 16.5 0.0 7.5 6.9 0.0 2.5 2 0 0 2 2 2 2 ACT domain Lactamase_B_2 PF12706.2 gi|21226894|ref|NP_632816.1| - 0.016 14.7 0.0 0.025 14.1 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain TetR_C_5 PF08360.6 gi|21226894|ref|NP_632816.1| - 0.018 15.0 0.1 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 QacR-like protein, C-terminal region DUF123 PF01986.11 gi|21226895|ref|NP_632817.1| - 7.8e-29 99.7 0.0 9.6e-29 99.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 ADP_ribosyl_GH PF03747.9 gi|21226896|ref|NP_632818.1| - 2.7e-65 221.0 0.2 3.1e-65 220.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Inhibitor_I42 PF09394.5 gi|21226897|ref|NP_632819.1| - 1.8e-19 69.8 0.0 2.8e-19 69.2 0.0 1.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Inhibitor_I71 PF12628.2 gi|21226897|ref|NP_632819.1| - 0.021 14.4 2.7 0.48 10.0 0.3 2.7 1 1 2 3 3 3 0 Falstatin, cysteine peptidase inhibitor Hexapep_2 PF14602.1 gi|21226897|ref|NP_632819.1| - 0.074 12.6 0.7 0.13 11.8 0.1 1.7 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase AAA PF00004.24 gi|21226900|ref|NP_632822.1| - 3.1e-43 147.1 0.0 8.2e-43 145.7 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|21226900|ref|NP_632822.1| - 7.7e-06 25.6 0.1 2.5e-05 24.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|21226900|ref|NP_632822.1| - 1.8e-05 24.8 0.1 0.00014 21.9 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|21226900|ref|NP_632822.1| - 3.3e-05 24.0 0.1 0.0013 18.8 0.1 2.5 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|21226900|ref|NP_632822.1| - 8.2e-05 21.7 0.0 0.0002 20.4 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_19 PF13245.1 gi|21226900|ref|NP_632822.1| - 0.00016 21.3 0.1 0.00044 19.9 0.1 1.7 1 0 0 1 1 1 1 Part of AAA domain AAA_2 PF07724.9 gi|21226900|ref|NP_632822.1| - 0.00017 21.5 0.0 0.0004 20.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.1 gi|21226900|ref|NP_632822.1| - 0.00034 20.5 0.0 0.0012 18.8 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.1 gi|21226900|ref|NP_632822.1| - 0.0013 19.5 0.1 0.0035 18.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain Leu_zip PF15294.1 gi|21226900|ref|NP_632822.1| - 0.0016 17.6 0.8 0.0024 17.0 0.5 1.2 1 0 0 1 1 1 1 Leucine zipper IstB_IS21 PF01695.12 gi|21226900|ref|NP_632822.1| - 0.0028 17.0 0.0 0.0049 16.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein KaiC PF06745.8 gi|21226900|ref|NP_632822.1| - 0.0047 16.0 0.0 0.03 13.4 0.0 2.2 1 1 1 2 2 2 1 KaiC AAA_3 PF07726.6 gi|21226900|ref|NP_632822.1| - 0.005 16.4 0.0 0.012 15.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.6 gi|21226900|ref|NP_632822.1| - 0.0055 16.5 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 Torsin RNA_helicase PF00910.17 gi|21226900|ref|NP_632822.1| - 0.0058 16.7 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 RNA helicase CPT PF07931.7 gi|21226900|ref|NP_632822.1| - 0.0058 16.2 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_33 PF13671.1 gi|21226900|ref|NP_632822.1| - 0.0059 16.4 0.0 0.013 15.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.1 gi|21226900|ref|NP_632822.1| - 0.0063 16.5 0.0 0.025 14.6 0.0 1.9 2 0 0 2 2 2 1 Sigma-54 interaction domain TIP49 PF06068.8 gi|21226900|ref|NP_632822.1| - 0.0076 15.0 0.1 0.014 14.1 0.0 1.4 1 0 0 1 1 1 1 TIP49 C-terminus Sigma54_activat PF00158.21 gi|21226900|ref|NP_632822.1| - 0.0077 15.7 0.1 0.046 13.2 0.0 2.3 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_18 PF13238.1 gi|21226900|ref|NP_632822.1| - 0.013 15.8 0.0 0.033 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.4 gi|21226900|ref|NP_632822.1| - 0.017 14.1 0.0 0.026 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.1 gi|21226900|ref|NP_632822.1| - 0.033 14.1 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|21226900|ref|NP_632822.1| - 0.034 13.2 0.0 0.069 12.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Viral_helicase1 PF01443.13 gi|21226900|ref|NP_632822.1| - 0.043 13.3 0.0 0.073 12.5 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Mg_chelatase PF01078.16 gi|21226900|ref|NP_632822.1| - 0.045 12.8 0.1 0.1 11.7 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF815 PF05673.8 gi|21226900|ref|NP_632822.1| - 0.05 12.5 0.0 0.096 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NACHT PF05729.7 gi|21226900|ref|NP_632822.1| - 0.055 13.1 0.3 0.19 11.3 0.1 1.9 1 1 1 2 2 2 0 NACHT domain AAA_25 PF13481.1 gi|21226900|ref|NP_632822.1| - 0.056 12.8 0.6 0.15 11.4 0.2 2.0 2 1 0 2 2 2 0 AAA domain Lum_binding PF00677.12 gi|21226900|ref|NP_632822.1| - 0.071 13.0 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 Lumazine binding domain ADK PF00406.17 gi|21226900|ref|NP_632822.1| - 0.16 11.8 0.7 3.3 7.5 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase Parvo_NS1 PF01057.12 gi|21226900|ref|NP_632822.1| - 0.18 10.6 0.0 0.32 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF131 PF01998.12 gi|21226901|ref|NP_632823.1| - 1.6e-15 56.2 4.3 1.6e-15 56.2 3.0 1.8 1 1 1 2 2 2 1 Protein of unknown function DUF131 Na_sulph_symp PF00939.14 gi|21226901|ref|NP_632823.1| - 0.035 12.9 3.7 0.082 11.7 2.6 1.5 1 1 0 1 1 1 0 Sodium:sulfate symporter transmembrane region DUF1634 PF07843.6 gi|21226901|ref|NP_632823.1| - 0.036 13.7 1.9 0.047 13.3 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1634) DUF1049 PF06305.6 gi|21226901|ref|NP_632823.1| - 0.38 10.2 3.3 2.6 7.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1049) SecG PF03840.9 gi|21226901|ref|NP_632823.1| - 0.87 9.3 6.6 1.7 8.4 4.6 1.6 1 1 0 1 1 1 0 Preprotein translocase SecG subunit PIRT PF15099.1 gi|21226901|ref|NP_632823.1| - 4.5 6.5 5.6 9.2 5.4 3.8 1.7 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family DUF131 PF01998.12 gi|21226902|ref|NP_632824.1| - 4.9e-25 86.6 0.2 5.7e-25 86.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF131 Adenylsucc_synt PF00709.16 gi|21226903|ref|NP_632825.1| - 6.8e-131 436.7 0.3 8.1e-131 436.5 0.2 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_S19e PF01090.14 gi|21226904|ref|NP_632826.1| - 1.5e-56 189.7 0.0 1.7e-56 189.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.8 gi|21226904|ref|NP_632826.1| - 0.011 15.3 0.0 4.9 6.8 0.0 2.6 3 0 0 3 3 3 0 Holliday junction DNA helicase ruvB C-terminus HTH_27 PF13463.1 gi|21226904|ref|NP_632826.1| - 0.061 13.6 0.0 0.28 11.5 0.0 2.1 1 1 0 1 1 1 0 Winged helix DNA-binding domain dsDNA_bind PF01984.15 gi|21226905|ref|NP_632827.1| - 4.3e-30 103.8 18.6 4.9e-30 103.6 12.9 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain PTRF_SDPR PF15237.1 gi|21226905|ref|NP_632827.1| - 0.012 15.0 3.8 0.012 15.0 2.6 1.2 1 1 0 1 1 1 0 PTRF/SDPR family 4HB_MCP_1 PF12729.2 gi|21226905|ref|NP_632827.1| - 0.058 12.7 1.1 0.2 10.9 0.1 1.9 1 1 1 2 2 2 0 Four helix bundle sensory module for signal transduction Caps_synth_GfcC PF06251.6 gi|21226905|ref|NP_632827.1| - 4.4 6.4 7.6 6 5.9 5.2 1.2 1 0 0 1 1 1 0 Capsule biosynthesis GfcC Endonuc_Holl PF10107.4 gi|21226905|ref|NP_632827.1| - 6 6.5 7.3 1.2 8.7 2.8 1.5 2 0 0 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase Asn_synthase PF00733.16 gi|21226906|ref|NP_632828.1| - 0.00041 19.9 0.0 0.0007 19.1 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|21226906|ref|NP_632828.1| - 0.013 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ATP_bind_4 PF01902.12 gi|21226906|ref|NP_632828.1| - 0.028 13.7 0.0 0.086 12.1 0.0 1.7 2 0 0 2 2 2 0 ATP-binding region tRNA_Me_trans PF03054.11 gi|21226906|ref|NP_632828.1| - 0.047 12.2 0.0 0.083 11.4 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase Ribosomal_L39 PF00832.15 gi|161485680|ref|NP_632829.2| - 3.6e-21 74.3 7.7 4.1e-21 74.1 5.3 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein PGAMP PF07644.6 gi|161485680|ref|NP_632829.2| - 0.023 14.4 0.2 0.037 13.7 0.1 1.3 1 0 0 1 1 1 0 Planctomycete PGAMP Ribosomal_L31e PF01198.14 gi|21226908|ref|NP_632830.1| - 7.4e-28 96.0 0.3 8.7e-28 95.8 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.13 gi|21226909|ref|NP_632831.1| - 1.6e-65 219.9 1.1 1.9e-65 219.6 0.7 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L18ae PF01775.12 gi|21226910|ref|NP_632832.1| - 6.1e-12 45.5 0.6 6.5e-12 45.4 0.4 1.0 1 0 0 1 1 1 1 Ribosomal L18ae/LX protein domain SelR PF01641.13 gi|21226910|ref|NP_632832.1| - 0.043 13.4 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 SelR domain Prefoldin PF02996.12 gi|21226911|ref|NP_632833.1| - 3.9e-30 103.9 2.7 3.9e-30 103.9 1.9 1.3 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|21226911|ref|NP_632833.1| - 1.9e-06 27.5 5.8 0.00025 20.7 0.3 2.2 2 0 0 2 2 2 2 Prefoldin subunit Peptidase_M13_N PF05649.8 gi|21226911|ref|NP_632833.1| - 0.0014 17.7 0.3 0.0017 17.4 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M13 CENP-F_leu_zip PF10473.4 gi|21226911|ref|NP_632833.1| - 0.0032 17.3 7.1 0.063 13.1 0.6 2.1 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF342 PF03961.8 gi|21226911|ref|NP_632833.1| - 0.0043 15.5 1.4 0.58 8.5 0.1 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF342) DUF4140 PF13600.1 gi|21226911|ref|NP_632833.1| - 0.0057 17.0 10.6 0.045 14.1 1.1 2.3 2 1 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) GAS PF13851.1 gi|21226911|ref|NP_632833.1| - 0.0061 15.7 4.8 0.11 11.7 0.4 2.1 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF1664 PF07889.7 gi|21226911|ref|NP_632833.1| - 0.0079 15.9 0.8 1.4 8.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) PMEI PF04043.10 gi|21226911|ref|NP_632833.1| - 0.0086 15.9 0.9 0.013 15.4 0.6 1.3 1 0 0 1 1 1 1 Plant invertase/pectin methylesterase inhibitor Effector_1 PF04518.7 gi|21226911|ref|NP_632833.1| - 0.01 14.8 5.9 0.24 10.3 0.7 2.1 2 0 0 2 2 2 0 Effector from type III secretion system Nup54 PF13874.1 gi|21226911|ref|NP_632833.1| - 0.012 15.2 7.0 0.57 9.8 0.4 2.3 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 Sec3_C_2 PF15278.1 gi|21226911|ref|NP_632833.1| - 0.016 15.3 0.6 6.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Sec3 exocyst complex subunit DegS PF05384.6 gi|21226911|ref|NP_632833.1| - 0.018 14.2 3.6 0.78 8.9 0.4 2.4 2 1 0 2 2 2 0 Sensor protein DegS Spc7 PF08317.6 gi|21226911|ref|NP_632833.1| - 0.02 13.5 7.1 0.27 9.8 0.6 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein XRCC4 PF06632.7 gi|21226911|ref|NP_632833.1| - 0.022 13.6 1.4 0.22 10.3 0.0 2.0 1 1 1 2 2 2 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Seryl_tRNA_N PF02403.17 gi|21226911|ref|NP_632833.1| - 0.023 14.6 7.1 0.43 10.6 1.2 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Tropomyosin_1 PF12718.2 gi|21226911|ref|NP_632833.1| - 0.026 14.3 7.2 0.5 10.2 0.5 2.1 2 0 0 2 2 2 0 Tropomyosin like Baculo_PEP_C PF04513.7 gi|21226911|ref|NP_632833.1| - 0.027 14.3 1.6 2.1 8.1 0.1 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.6 gi|21226911|ref|NP_632833.1| - 0.029 14.2 1.4 0.62 9.9 0.1 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) MIF4G_like_2 PF09090.6 gi|21226911|ref|NP_632833.1| - 0.031 13.5 0.3 0.038 13.2 0.2 1.1 1 0 0 1 1 1 0 MIF4G like DUF148 PF02520.12 gi|21226911|ref|NP_632833.1| - 0.031 14.0 7.2 0.4 10.4 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF148 IncA PF04156.9 gi|21226911|ref|NP_632833.1| - 0.036 13.6 6.1 1.3 8.5 1.3 2.0 2 0 0 2 2 2 0 IncA protein DUF3287 PF11690.3 gi|21226911|ref|NP_632833.1| - 0.051 13.6 0.6 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) CDC37_N PF03234.9 gi|21226911|ref|NP_632833.1| - 0.059 13.6 1.4 0.096 12.9 1.0 1.3 1 1 0 1 1 1 0 Cdc37 N terminal kinase binding COG2 PF06148.6 gi|21226911|ref|NP_632833.1| - 0.065 13.1 3.2 0.4 10.5 0.4 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 NPV_P10 PF05531.7 gi|21226911|ref|NP_632833.1| - 0.067 13.4 1.1 6.7 7.0 0.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF3450 PF11932.3 gi|21226911|ref|NP_632833.1| - 0.077 12.2 9.1 0.22 10.7 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) RmuC PF02646.11 gi|21226911|ref|NP_632833.1| - 0.079 11.7 7.6 0.15 10.8 0.4 2.0 2 0 0 2 2 2 0 RmuC family Hemerythrin PF01814.18 gi|21226911|ref|NP_632833.1| - 0.082 13.0 1.8 1 9.5 0.4 2.1 2 0 0 2 2 2 0 Hemerythrin HHE cation binding domain AAA_13 PF13166.1 gi|21226911|ref|NP_632833.1| - 0.087 11.2 6.2 0.28 9.5 0.7 2.0 2 0 0 2 2 2 0 AAA domain YqjK PF13997.1 gi|21226911|ref|NP_632833.1| - 0.096 12.8 0.7 0.41 10.8 0.1 2.2 2 1 0 2 2 2 0 YqjK-like protein TBPIP PF07106.8 gi|21226911|ref|NP_632833.1| - 0.11 12.0 5.6 0.59 9.6 0.3 2.1 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) DUF4200 PF13863.1 gi|21226911|ref|NP_632833.1| - 0.11 12.4 13.2 1 9.2 2.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) DUF972 PF06156.8 gi|21226911|ref|NP_632833.1| - 0.12 12.7 4.2 2.6 8.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF972) WXG100 PF06013.7 gi|21226911|ref|NP_632833.1| - 0.12 12.3 9.8 0.37 10.8 0.6 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG Synaptobrevin PF00957.16 gi|21226911|ref|NP_632833.1| - 0.13 11.8 3.4 0.41 10.2 0.1 2.2 2 0 0 2 2 2 0 Synaptobrevin DUF2458 PF10454.4 gi|21226911|ref|NP_632833.1| - 0.13 12.0 4.5 0.18 11.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2458) Syntaxin PF00804.20 gi|21226911|ref|NP_632833.1| - 0.14 12.3 5.1 2.5 8.3 3.5 2.1 1 1 0 1 1 1 0 Syntaxin Helicase_IV_N PF12462.3 gi|21226911|ref|NP_632833.1| - 0.15 11.6 1.9 1.8 8.1 0.0 2.1 2 0 0 2 2 2 0 DNA helicase IV / RNA helicase N terminal DivIVA PF05103.8 gi|21226911|ref|NP_632833.1| - 0.15 12.0 8.3 0.44 10.6 1.1 2.1 2 0 0 2 2 2 0 DivIVA protein EMP24_GP25L PF01105.19 gi|21226911|ref|NP_632833.1| - 0.16 11.6 2.1 0.9 9.2 0.0 2.0 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD TMPIT PF07851.8 gi|21226911|ref|NP_632833.1| - 0.17 10.9 1.2 1.4 7.9 0.1 2.0 2 0 0 2 2 2 0 TMPIT-like protein MAD PF05557.8 gi|21226911|ref|NP_632833.1| - 0.17 9.9 4.4 0.34 8.9 0.3 1.9 2 0 0 2 2 2 0 Mitotic checkpoint protein Nsp1_C PF05064.8 gi|21226911|ref|NP_632833.1| - 0.2 11.3 2.5 3.8 7.1 0.2 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region Reo_sigmaC PF04582.7 gi|21226911|ref|NP_632833.1| - 0.2 10.7 3.2 2.3 7.3 0.2 2.0 1 1 0 2 2 2 0 Reovirus sigma C capsid protein Laminin_II PF06009.7 gi|21226911|ref|NP_632833.1| - 0.21 11.3 5.0 2 8.1 0.4 2.2 2 0 0 2 2 2 0 Laminin Domain II Fib_alpha PF08702.5 gi|21226911|ref|NP_632833.1| - 0.22 11.6 2.5 11 6.1 0.2 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Bacillus_HBL PF05791.6 gi|21226911|ref|NP_632833.1| - 0.25 10.6 4.1 3.5 6.9 0.4 2.1 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Vps51 PF08700.6 gi|21226911|ref|NP_632833.1| - 0.27 11.0 2.8 13 5.7 0.3 2.8 2 1 0 2 2 2 0 Vps51/Vps67 BLOC1_2 PF10046.4 gi|21226911|ref|NP_632833.1| - 0.3 11.2 6.4 1.8 8.7 0.5 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EzrA PF06160.7 gi|21226911|ref|NP_632833.1| - 0.31 9.1 5.3 1.2 7.2 0.8 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Syntaxin-6_N PF09177.6 gi|21226911|ref|NP_632833.1| - 0.34 11.3 2.4 4.8 7.6 0.2 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal APG6 PF04111.7 gi|21226911|ref|NP_632833.1| - 0.35 9.8 7.5 1.8 7.5 0.8 2.1 2 0 0 2 2 2 0 Autophagy protein Apg6 Laminin_I PF06008.9 gi|21226911|ref|NP_632833.1| - 0.43 9.8 9.0 1.5 8.1 1.3 2.1 2 0 0 2 2 2 0 Laminin Domain I PspA_IM30 PF04012.7 gi|21226911|ref|NP_632833.1| - 0.49 9.7 12.8 0.97 8.7 2.7 2.1 2 0 0 2 2 2 0 PspA/IM30 family ADIP PF11559.3 gi|21226911|ref|NP_632833.1| - 0.49 10.2 8.6 1.2 9.0 0.8 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding RasGAP_C PF03836.10 gi|21226911|ref|NP_632833.1| - 0.5 10.0 4.0 9 5.9 0.2 2.1 2 0 0 2 2 2 0 RasGAP C-terminus APG17 PF04108.7 gi|21226911|ref|NP_632833.1| - 0.51 9.0 4.6 2.9 6.5 0.3 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 DUF4446 PF14584.1 gi|21226911|ref|NP_632833.1| - 0.53 10.1 3.9 6.3 6.6 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) DUF4515 PF14988.1 gi|21226911|ref|NP_632833.1| - 0.54 9.8 8.9 4.5 6.8 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4515) CCDC155 PF14662.1 gi|21226911|ref|NP_632833.1| - 0.58 9.7 7.5 0.14 11.7 0.5 2.0 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 TMF_DNA_bd PF12329.3 gi|21226911|ref|NP_632833.1| - 0.59 9.9 9.6 1.6 8.5 0.5 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding bZIP_1 PF00170.16 gi|21226911|ref|NP_632833.1| - 0.68 9.9 4.7 3.2 7.7 0.1 2.4 2 0 0 2 2 2 0 bZIP transcription factor CHDCT2 PF08074.6 gi|21226911|ref|NP_632833.1| - 0.68 9.6 3.3 0.74 9.5 0.4 1.9 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain DUF2968 PF11180.3 gi|21226911|ref|NP_632833.1| - 0.7 9.2 9.6 0.51 9.6 1.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) HlyD PF00529.15 gi|21226911|ref|NP_632833.1| - 0.81 8.9 9.6 1 8.5 6.7 1.1 1 0 0 1 1 1 0 HlyD family secretion protein M_domain PF12938.2 gi|21226911|ref|NP_632833.1| - 0.91 9.2 5.5 0.52 10.0 1.1 1.9 1 1 0 2 2 2 0 M domain of GW182 Tropomyosin PF00261.15 gi|21226911|ref|NP_632833.1| - 0.92 8.5 9.5 0.81 8.7 0.3 2.1 2 0 0 2 2 2 0 Tropomyosin Cortex-I_coil PF09304.5 gi|21226911|ref|NP_632833.1| - 1 9.4 8.0 3 7.9 0.6 2.2 2 0 0 2 2 2 0 Cortexillin I, coiled coil DUF607 PF04678.8 gi|21226911|ref|NP_632833.1| - 1.1 9.1 7.6 5.8 6.8 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function, DUF607 bZIP_Maf PF03131.12 gi|21226911|ref|NP_632833.1| - 1.2 9.5 5.6 8.2 6.8 0.2 2.2 2 0 0 2 2 2 0 bZIP Maf transcription factor NTR2 PF15458.1 gi|21226911|ref|NP_632833.1| - 1.4 8.1 10.2 1.3 8.2 1.3 2.1 2 0 0 2 2 2 0 Nineteen complex-related protein 2 Zwint PF15556.1 gi|21226911|ref|NP_632833.1| - 1.4 8.0 7.4 0.89 8.7 0.4 2.1 2 0 0 2 2 2 0 ZW10 interactor FadA PF09403.5 gi|21226911|ref|NP_632833.1| - 1.5 8.8 5.5 2 8.4 1.0 2.2 2 0 0 2 2 2 0 Adhesion protein FadA Flagellin_N PF00669.15 gi|21226911|ref|NP_632833.1| - 1.6 8.5 8.9 2.1 8.1 2.2 2.2 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region DUF2203 PF09969.4 gi|21226911|ref|NP_632833.1| - 1.7 8.8 6.2 8.9 6.5 1.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) GrpE PF01025.14 gi|21226911|ref|NP_632833.1| - 2.6 7.5 6.7 4.6 6.7 0.5 2.1 2 0 0 2 2 2 0 GrpE HAUS6_N PF14661.1 gi|21226911|ref|NP_632833.1| - 3 7.1 6.5 7.1 5.9 1.7 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF3584 PF12128.3 gi|21226911|ref|NP_632833.1| - 3.4 4.8 9.6 28 1.8 6.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Tektin PF03148.9 gi|21226911|ref|NP_632833.1| - 3.5 6.0 8.7 2.5 6.5 0.8 2.0 2 0 0 2 2 2 0 Tektin family Adeno_PIX PF03955.9 gi|21226911|ref|NP_632833.1| - 3.6 8.1 8.3 4.9 7.7 0.6 2.4 1 1 2 3 3 3 0 Adenovirus hexon-associated protein (IX) Mnd1 PF03962.10 gi|21226911|ref|NP_632833.1| - 3.7 7.1 8.0 51 3.4 5.5 2.1 1 1 0 1 1 1 0 Mnd1 family ERM PF00769.14 gi|21226911|ref|NP_632833.1| - 3.9 6.9 9.9 5.7 6.3 0.8 2.1 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Ax_dynein_light PF10211.4 gi|21226911|ref|NP_632833.1| - 4.2 7.1 8.7 2.3 8.0 0.9 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain Tup_N PF08581.5 gi|21226911|ref|NP_632833.1| - 4.6 7.5 6.4 2.7 8.2 0.7 2.1 2 0 0 2 2 2 0 Tup N-terminal DUF812 PF05667.6 gi|21226911|ref|NP_632833.1| - 5.2 5.4 11.1 3 6.2 1.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF812) HAUS-augmin3 PF14932.1 gi|21226911|ref|NP_632833.1| - 5.3 6.1 9.0 3.8 6.6 0.7 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 EAP30 PF04157.11 gi|21226911|ref|NP_632833.1| - 5.9 5.9 8.6 5.1 6.1 0.6 2.1 2 0 0 2 2 2 0 EAP30/Vps36 family DUF724 PF05266.9 gi|21226911|ref|NP_632833.1| - 5.9 6.4 7.9 10 5.7 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) MerR-DNA-bind PF09278.6 gi|21226911|ref|NP_632833.1| - 7.8 6.9 9.4 12 6.3 2.1 2.3 2 0 0 2 2 2 0 MerR, DNA binding TPR_MLP1_2 PF07926.7 gi|21226911|ref|NP_632833.1| - 8.9 6.0 11.1 1.3e+02 2.3 7.7 2.3 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein SRP54 PF00448.17 gi|21226912|ref|NP_632834.1| - 2.6e-71 239.1 0.2 4.4e-71 238.3 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|21226912|ref|NP_632834.1| - 2.2e-11 43.6 0.7 2.2e-11 43.6 0.5 3.1 4 0 0 4 4 4 1 SRP54-type protein, helical bundle domain APS_kinase PF01583.15 gi|21226912|ref|NP_632834.1| - 0.00038 20.1 0.2 0.00092 18.9 0.0 1.7 2 0 0 2 2 2 1 Adenylylsulphate kinase MobB PF03205.9 gi|21226912|ref|NP_632834.1| - 0.0029 17.2 0.7 0.0029 17.2 0.5 2.6 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_28 PF13521.1 gi|21226912|ref|NP_632834.1| - 0.0034 17.3 0.1 0.018 14.9 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|21226912|ref|NP_632834.1| - 0.004 16.7 0.2 0.011 15.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|21226912|ref|NP_632834.1| - 0.0083 15.2 0.0 0.018 14.1 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.1 gi|21226912|ref|NP_632834.1| - 0.021 14.9 0.1 0.089 12.9 0.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|21226912|ref|NP_632834.1| - 0.028 14.3 0.0 0.071 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA PF00004.24 gi|21226912|ref|NP_632834.1| - 0.061 13.5 0.1 0.37 10.9 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.12 gi|21226912|ref|NP_632834.1| - 0.072 12.4 4.3 0.25 10.6 0.0 3.2 3 0 0 3 3 3 0 Thymidylate kinase ArgK PF03308.11 gi|21226912|ref|NP_632834.1| - 0.085 11.6 1.3 0.14 10.9 0.0 2.0 2 0 0 2 2 2 0 ArgK protein AAA_10 PF12846.2 gi|21226912|ref|NP_632834.1| - 0.11 11.8 0.0 0.24 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA-like domain AAA_23 PF13476.1 gi|21226912|ref|NP_632834.1| - 1.3 9.3 12.5 4 7.7 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|21226912|ref|NP_632834.1| - 9.4 7.0 7.5 11 6.8 0.3 3.0 2 2 1 3 3 3 0 AAA domain PspC PF04024.7 gi|21226913|ref|NP_632835.1| - 5.3e-28 96.2 1.1 5.7e-28 96.1 0.8 1.0 1 0 0 1 1 1 1 PspC domain DUF539 PF04400.8 gi|21226913|ref|NP_632835.1| - 0.019 14.4 0.2 0.027 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF539) DUF11 PF01345.13 gi|21226914|ref|NP_632836.1| - 0.25 11.3 3.2 0.47 10.5 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF11 DUF523 PF04463.7 gi|21226915|ref|NP_632837.1| - 5.7e-40 136.3 0.0 1e-39 135.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF523) DUF1722 PF08349.6 gi|21226915|ref|NP_632837.1| - 2.4e-37 127.3 0.0 6.3e-37 126.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1722) AhpC-TSA PF00578.16 gi|21226916|ref|NP_632838.1| - 8.5e-35 119.1 0.1 1.2e-34 118.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.4 gi|21226916|ref|NP_632838.1| - 2.4e-16 59.0 1.1 1e-15 57.0 0.3 2.1 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.5 gi|21226916|ref|NP_632838.1| - 1.5e-14 53.7 0.0 2e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin DUF4511 PF14974.1 gi|21226916|ref|NP_632838.1| - 0.0068 16.1 0.3 0.015 15.0 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4511) KAT11 PF08214.6 gi|21226916|ref|NP_632838.1| - 0.11 11.5 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Histone acetylation protein SlyX PF04102.7 gi|21226917|ref|NP_632839.1| - 0.0036 17.6 0.1 0.0052 17.1 0.1 1.2 1 0 0 1 1 1 1 SlyX DASH_Spc34 PF08657.5 gi|21226917|ref|NP_632839.1| - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 Tantalus PF15386.1 gi|21226917|ref|NP_632839.1| - 5.2 6.9 5.7 13 5.5 4.0 1.9 1 1 0 1 1 1 0 Drosophila Tantalus-like DDE_Tnp_IS66 PF03050.9 gi|21226918|ref|NP_632840.1| - 1.2e-70 237.8 0.0 1.4e-70 237.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21226918|ref|NP_632840.1| - 1.2e-09 37.9 3.6 3.2e-09 36.6 2.5 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21226918|ref|NP_632840.1| - 7.9e-07 29.1 1.4 0.017 15.0 0.1 3.1 3 0 0 3 3 3 2 DDE domain p31comet PF06581.7 gi|21226918|ref|NP_632840.1| - 0.017 14.0 0.2 0.029 13.2 0.1 1.3 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding Apolipoprotein PF01442.13 gi|21226918|ref|NP_632840.1| - 0.022 14.3 0.4 0.037 13.5 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain zf-ribbon_3 PF13248.1 gi|21226918|ref|NP_632840.1| - 0.12 11.5 4.6 0.29 10.3 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|21226918|ref|NP_632840.1| - 0.15 11.8 3.2 0.34 10.7 1.5 2.3 2 1 0 2 2 1 0 Double zinc ribbon Takusan PF04822.8 gi|21226918|ref|NP_632840.1| - 0.17 11.6 2.8 0.18 11.6 0.9 1.8 1 1 0 1 1 1 0 Takusan zf-RING_5 PF14634.1 gi|21226918|ref|NP_632840.1| - 0.17 11.6 5.7 1.4 8.7 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21226918|ref|NP_632840.1| - 0.26 10.8 6.5 1 8.9 0.1 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|21226918|ref|NP_632840.1| - 3.5 7.3 6.5 2.9 7.6 1.3 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) P5CR_dimer PF14748.1 gi|21226919|ref|NP_632841.1| - 8.6e-42 141.5 2.0 8.6e-42 141.5 1.4 1.9 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.12 gi|21226919|ref|NP_632841.1| - 1e-20 73.9 2.1 3.4e-20 72.2 0.4 2.2 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|21226919|ref|NP_632841.1| - 5.2e-07 29.5 4.6 6.4e-06 25.9 3.0 2.3 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.10 gi|21226919|ref|NP_632841.1| - 7.3e-06 25.9 0.5 1.7e-05 24.6 0.3 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase PDH PF02153.12 gi|21226919|ref|NP_632841.1| - 0.0073 15.2 0.0 0.014 14.3 0.0 1.4 1 0 0 1 1 1 1 Prephenate dehydrogenase DapB_N PF01113.15 gi|21226919|ref|NP_632841.1| - 0.077 12.9 0.1 0.22 11.4 0.1 1.8 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.11 gi|21226919|ref|NP_632841.1| - 0.11 11.9 1.7 0.26 10.7 1.2 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.9 gi|21226919|ref|NP_632841.1| - 0.34 10.2 2.6 2.3 7.5 0.7 2.7 1 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA_kinase PF00696.23 gi|21226920|ref|NP_632842.1| - 2.5e-35 122.1 0.1 3.2e-35 121.8 0.1 1.1 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.15 gi|21226920|ref|NP_632842.1| - 1.1e-19 69.9 0.7 1.1e-19 69.9 0.5 1.9 2 0 0 2 2 2 1 PUA domain Aldedh PF00171.17 gi|21226921|ref|NP_632843.1| - 4.9e-16 58.1 0.1 3.8e-12 45.3 0.0 2.3 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF356 PF04009.7 gi|21226922|ref|NP_632844.1| - 1.5e-44 150.4 0.1 1.8e-44 150.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF356) Abhydrolase_7 PF12715.2 gi|21226922|ref|NP_632844.1| - 0.037 12.9 0.0 0.046 12.6 0.0 1.0 1 0 0 1 1 1 0 Abhydrolase family Toprim_4 PF13662.1 gi|21226923|ref|NP_632845.1| - 1.2e-06 28.3 0.0 5.3e-06 26.3 0.0 1.9 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|21226923|ref|NP_632845.1| - 6.8e-06 25.9 0.1 0.0002 21.2 0.1 2.4 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.1 gi|21226923|ref|NP_632845.1| - 0.0094 16.2 0.0 0.017 15.3 0.0 1.5 1 1 0 1 1 1 1 Toprim-like DUF3529 PF12046.3 gi|21226923|ref|NP_632845.1| - 0.029 13.3 0.1 0.072 12.1 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3529) DUF167 PF02594.11 gi|21226924|ref|NP_632846.1| - 2.6e-22 78.5 0.0 3.1e-22 78.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Phosphoprotein PF00922.12 gi|21226924|ref|NP_632846.1| - 0.075 12.2 0.1 0.085 12.0 0.1 1.1 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein Amidohydro_1 PF01979.15 gi|21226925|ref|NP_632847.1| - 4.7e-14 52.7 0.2 9.9e-13 48.4 0.1 2.0 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.17 gi|21226925|ref|NP_632847.1| - 2.1e-08 33.4 0.0 3.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_4 PF13147.1 gi|21226925|ref|NP_632847.1| - 1e-07 32.3 0.0 5.7e-07 29.8 0.0 1.9 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_5 PF13594.1 gi|21226925|ref|NP_632847.1| - 5.8e-05 22.8 0.1 0.00011 21.9 0.0 1.5 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|21226925|ref|NP_632847.1| - 0.00026 20.3 0.0 0.0034 16.6 0.0 2.2 2 0 0 2 2 2 1 Amidohydrolase family Peripla_BP_2 PF01497.13 gi|21226925|ref|NP_632847.1| - 0.0068 15.5 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Usp PF00582.21 gi|21226926|ref|NP_632848.1| - 2.4e-39 134.7 0.2 2.7e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF1693 PF07984.7 gi|21226926|ref|NP_632848.1| - 0.14 11.2 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1693) CBS PF00571.23 gi|21226927|ref|NP_632849.1| - 3e-48 161.3 10.9 1.1e-15 57.0 0.1 4.1 4 0 0 4 4 4 4 CBS domain H_kinase_N PF12282.3 gi|21226927|ref|NP_632849.1| - 0.014 15.0 1.2 2.7 7.6 0.0 2.9 2 1 1 3 3 3 0 Signal transduction histidine kinase GAF_2 PF13185.1 gi|21226927|ref|NP_632849.1| - 0.081 13.4 0.6 1.4 9.4 0.0 2.5 2 1 1 3 3 3 0 GAF domain Peptidase_S55 PF05580.7 gi|21226927|ref|NP_632849.1| - 0.12 11.8 0.2 1.8 7.9 0.0 2.4 2 1 0 2 2 2 0 SpoIVB peptidase S55 Cache_3 PF14827.1 gi|21226927|ref|NP_632849.1| - 0.9 9.4 3.4 38 4.2 0.1 3.4 3 1 1 4 4 4 0 Sensory domain of two-component sensor kinase RibD_C PF01872.12 gi|21226928|ref|NP_632850.1| - 9.5e-57 191.8 0.0 1.1e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DUF1851 PF08906.6 gi|21226928|ref|NP_632850.1| - 0.13 12.2 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1851) CxxCxxCC PF03692.10 gi|21226929|ref|NP_632851.1| - 6.7e-12 45.7 2.1 1.8e-11 44.3 1.4 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain CRCB PF02537.10 gi|21226930|ref|NP_632852.1| - 6e-26 90.6 8.5 6.8e-26 90.4 5.9 1.0 1 0 0 1 1 1 1 CrcB-like protein MFS_1 PF07690.11 gi|21226930|ref|NP_632852.1| - 0.083 11.5 6.9 0.11 11.1 4.8 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily SCAMP PF04144.8 gi|21226930|ref|NP_632852.1| - 0.16 11.8 1.6 0.18 11.6 1.1 1.1 1 0 0 1 1 1 0 SCAMP family CRCB PF02537.10 gi|21226931|ref|NP_632853.1| - 5e-23 81.2 12.6 5.8e-23 81.0 8.7 1.0 1 0 0 1 1 1 1 CrcB-like protein MoeA_N PF03453.12 gi|21226932|ref|NP_632854.1| - 2.6e-45 153.6 0.1 4.7e-45 152.8 0.0 1.5 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|21226932|ref|NP_632854.1| - 2.4e-30 104.8 0.0 4.1e-30 104.0 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|21226932|ref|NP_632854.1| - 2.5e-14 52.9 3.1 1.1e-13 50.8 0.0 2.8 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) MutL PF13941.1 gi|21226932|ref|NP_632854.1| - 0.025 12.9 0.1 0.036 12.3 0.0 1.2 1 0 0 1 1 1 0 MutL protein UPF0052 PF01933.13 gi|21226932|ref|NP_632854.1| - 0.087 12.1 0.0 0.14 11.4 0.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0052 ThiS PF02597.15 gi|21226933|ref|NP_632855.1| - 4.5e-20 71.8 0.1 5.3e-20 71.6 0.0 1.1 1 0 0 1 1 1 1 ThiS family Colicin_Pyocin PF01320.13 gi|21226933|ref|NP_632855.1| - 0.07 12.9 0.0 0.093 12.5 0.0 1.3 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein Cut8_M PF14483.1 gi|21226933|ref|NP_632855.1| - 0.094 12.5 0.3 1.1 9.1 0.0 2.1 2 0 0 2 2 2 0 Cut8 dimerisation domain PMT_2 PF13231.1 gi|21226934|ref|NP_632856.1| - 5.4e-13 49.1 9.9 5.4e-13 49.1 6.9 4.3 4 1 1 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase STT3 PF02516.9 gi|21226934|ref|NP_632856.1| - 0.24 10.3 28.7 1.8 7.4 19.5 2.3 1 1 0 1 1 1 0 Oligosaccharyl transferase STT3 subunit CBS PF00571.23 gi|21226935|ref|NP_632857.1| - 3.8e-33 113.0 2.1 1.4e-15 56.7 0.1 2.1 2 0 0 2 2 2 2 CBS domain Cache_1 PF02743.13 gi|21226935|ref|NP_632857.1| - 0.047 13.2 0.2 0.15 11.6 0.0 1.8 2 1 0 2 2 2 0 Cache domain Na_H_Exchanger PF00999.16 gi|21226936|ref|NP_632858.1| - 4.5e-57 193.2 52.1 5e-57 193.1 36.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family E1-E2_ATPase PF00122.15 gi|21226937|ref|NP_632859.1| - 2.6e-73 245.8 0.1 2.6e-73 245.8 0.1 2.2 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|21226937|ref|NP_632859.1| - 2.3e-47 160.8 10.6 2.3e-47 160.8 7.3 2.8 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|21226937|ref|NP_632859.1| - 1.2e-39 136.9 0.0 5.1e-39 134.9 0.0 2.1 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|21226937|ref|NP_632859.1| - 9.3e-24 83.2 0.0 2.8e-23 81.6 0.0 1.9 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Cation_ATPase_N PF00690.21 gi|21226937|ref|NP_632859.1| - 1.7e-20 72.2 0.0 3.8e-20 71.1 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|21226937|ref|NP_632859.1| - 8.5e-18 65.2 0.0 1.8e-17 64.1 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21226937|ref|NP_632859.1| - 1.9e-05 24.3 1.2 0.0056 16.2 0.6 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.16 gi|21226937|ref|NP_632859.1| - 0.043 14.0 0.2 0.31 11.1 0.1 2.4 1 1 0 1 1 1 0 Radical SAM superfamily Amino_oxidase PF01593.19 gi|21226938|ref|NP_632860.1| - 2.6e-20 72.9 0.0 2.7e-19 69.5 0.0 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 gi|21226938|ref|NP_632860.1| - 9.2e-12 44.8 0.1 4.1e-11 42.7 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|21226938|ref|NP_632860.1| - 1.4e-10 40.6 0.1 2e-05 23.6 0.0 2.6 2 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21226938|ref|NP_632860.1| - 4.7e-07 29.0 0.0 0.0002 20.3 0.0 2.5 3 0 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.9 gi|21226938|ref|NP_632860.1| - 0.00017 21.4 0.0 0.0049 16.7 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|21226938|ref|NP_632860.1| - 0.00047 18.7 0.1 0.47 8.8 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein Thi4 PF01946.12 gi|21226938|ref|NP_632860.1| - 0.0023 17.0 1.1 0.0081 15.2 0.1 2.2 2 0 0 2 2 2 1 Thi4 family Lycopene_cycl PF05834.7 gi|21226938|ref|NP_632860.1| - 0.012 14.6 0.0 1.5 7.6 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein GIDA PF01134.17 gi|21226938|ref|NP_632860.1| - 0.027 13.3 0.0 0.12 11.2 0.0 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|21226938|ref|NP_632860.1| - 0.054 13.9 0.2 7.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21226938|ref|NP_632860.1| - 0.083 12.9 0.0 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|21226938|ref|NP_632860.1| - 0.11 12.3 0.1 0.43 10.3 0.0 2.0 3 0 0 3 3 3 0 FAD-NAD(P)-binding DUF3303 PF11746.3 gi|21226939|ref|NP_632861.1| - 6.8e-08 32.7 0.0 7.1e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) Herpes_IE1 PF07340.6 gi|21226939|ref|NP_632861.1| - 0.006 15.0 0.0 0.0072 14.8 0.0 1.0 1 0 0 1 1 1 1 Cytomegalovirus IE1 protein Aldedh PF00171.17 gi|21226940|ref|NP_632862.1| - 2.3e-165 550.3 0.0 2.8e-165 550.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|21226940|ref|NP_632862.1| - 0.0027 16.4 0.0 0.006 15.3 0.0 1.5 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF2298 PF10060.4 gi|21226941|ref|NP_632863.1| - 1.6e-145 485.5 46.3 2.3e-145 485.0 32.1 1.2 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) UPF0104 PF03706.8 gi|21226942|ref|NP_632864.1| - 5.9e-43 147.2 21.4 8.4e-43 146.7 14.8 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) CRA PF06589.6 gi|21226942|ref|NP_632864.1| - 0.0038 16.5 0.2 0.0065 15.7 0.1 1.4 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) Glycos_transf_2 PF00535.21 gi|21226942|ref|NP_632864.1| - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF4175 PF13779.1 gi|21226942|ref|NP_632864.1| - 0.43 8.2 1.1 0.89 7.1 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4175) DUF3357 PF11837.3 gi|21226942|ref|NP_632864.1| - 0.8 9.5 2.7 20 5.0 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF3357) HTH_5 PF01022.15 gi|21226943|ref|NP_632865.1| - 4.2e-16 58.3 0.9 7.3e-16 57.5 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21226943|ref|NP_632865.1| - 4.7e-14 51.9 0.7 1e-13 50.8 0.5 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|21226943|ref|NP_632865.1| - 0.0028 17.4 0.0 0.0049 16.6 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DUF2513 PF10711.4 gi|21226943|ref|NP_632865.1| - 0.006 16.6 0.1 0.01 15.9 0.0 1.5 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) HTH_34 PF13601.1 gi|21226943|ref|NP_632865.1| - 0.0088 16.0 0.1 0.014 15.4 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21226943|ref|NP_632865.1| - 0.0098 15.5 0.2 0.024 14.2 0.1 1.7 1 1 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21226943|ref|NP_632865.1| - 0.011 16.0 0.0 0.025 14.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain ArsR PF09824.4 gi|21226943|ref|NP_632865.1| - 0.037 13.3 0.0 0.045 13.0 0.0 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator FAM74 PF15026.1 gi|21226943|ref|NP_632865.1| - 0.037 13.6 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 FAM74 protein PadR PF03551.9 gi|21226943|ref|NP_632865.1| - 0.049 13.4 0.1 0.12 12.2 0.1 1.8 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_24 PF13412.1 gi|21226943|ref|NP_632865.1| - 0.051 12.9 1.5 0.28 10.5 0.0 2.5 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding LETM1 PF07766.8 gi|21226943|ref|NP_632865.1| - 0.059 12.4 0.1 0.068 12.2 0.1 1.1 1 0 0 1 1 1 0 LETM1-like protein Mrr_N PF14338.1 gi|21226943|ref|NP_632865.1| - 0.11 12.5 0.1 0.32 11.1 0.0 1.8 2 1 0 2 2 2 0 Mrr N-terminal domain NikR_C PF08753.6 gi|21226944|ref|NP_632866.1| - 1.1e-34 118.1 2.4 1.5e-34 117.6 1.7 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|21226944|ref|NP_632866.1| - 4.2e-08 32.7 0.1 4.2e-08 32.7 0.0 2.2 3 0 0 3 3 3 1 Ribbon-helix-helix protein, copG family AMP-binding PF00501.23 gi|21226945|ref|NP_632867.1| - 1.4e-20 73.1 0.0 3.4e-20 71.8 0.0 1.4 1 1 0 1 1 1 1 AMP-binding enzyme LIM PF00412.17 gi|21226946|ref|NP_632868.1| - 0.00092 19.2 1.5 0.0016 18.4 1.0 1.4 1 0 0 1 1 1 1 LIM domain TrmB PF01978.14 gi|21226946|ref|NP_632868.1| - 0.0021 17.7 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|21226946|ref|NP_632868.1| - 0.03 13.6 0.0 0.048 13.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Metallothio_Pro PF02069.11 gi|21226946|ref|NP_632868.1| - 0.052 13.3 5.3 0.089 12.6 3.6 1.3 1 0 0 1 1 1 0 Prokaryotic metallothionein FaeA PF04703.7 gi|21226946|ref|NP_632868.1| - 0.054 13.6 0.0 0.084 13.0 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein Sigma70_ECF PF07638.6 gi|21226946|ref|NP_632868.1| - 0.078 12.6 0.0 0.098 12.3 0.0 1.1 1 0 0 1 1 1 0 ECF sigma factor DZR PF12773.2 gi|21226946|ref|NP_632868.1| - 0.61 9.9 4.3 1.1 9.0 3.0 1.4 1 0 0 1 1 1 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|21226946|ref|NP_632868.1| - 1.6 8.4 5.5 1.1 8.9 2.7 1.5 2 0 0 2 2 2 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|21226946|ref|NP_632868.1| - 3.2 7.1 7.7 2.7 7.3 0.4 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding CMD PF02627.15 gi|21226947|ref|NP_632869.1| - 4.4e-20 71.2 0.1 5.3e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF1144 PF06610.8 gi|21226947|ref|NP_632869.1| - 0.029 14.1 0.4 0.22 11.2 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1144) TrmB PF01978.14 gi|21226948|ref|NP_632870.1| - 7.5e-05 22.3 0.0 0.26 11.0 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB LIM PF00412.17 gi|21226948|ref|NP_632870.1| - 0.0011 18.9 1.4 0.0021 18.0 1.0 1.4 1 0 0 1 1 1 1 LIM domain Penicillinase_R PF03965.11 gi|21226948|ref|NP_632870.1| - 0.0078 16.2 0.0 0.028 14.5 0.0 1.8 2 0 0 2 2 2 1 Penicillinase repressor HTH_IclR PF09339.5 gi|21226948|ref|NP_632870.1| - 0.009 15.5 0.0 0.024 14.2 0.0 1.8 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|21226948|ref|NP_632870.1| - 0.012 15.4 0.0 0.84 9.4 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_9 PF08221.6 gi|21226948|ref|NP_632870.1| - 0.017 14.9 0.0 0.044 13.6 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PadR PF03551.9 gi|21226948|ref|NP_632870.1| - 0.02 14.6 0.0 0.04 13.6 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Prot_inhib_II PF02428.10 gi|21226948|ref|NP_632870.1| - 0.063 13.3 1.3 0.1 12.6 0.9 1.3 1 0 0 1 1 1 0 Potato type II proteinase inhibitor family Phage_DsbA PF11126.3 gi|21226948|ref|NP_632870.1| - 0.065 13.3 0.0 1.2 9.3 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator DsbA zf-FCS PF06467.9 gi|21226948|ref|NP_632870.1| - 0.067 12.8 0.4 0.14 11.8 0.3 1.5 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif TFIIE_alpha PF02002.12 gi|21226948|ref|NP_632870.1| - 0.069 12.6 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit RPA_C PF08784.6 gi|21226948|ref|NP_632870.1| - 0.14 12.5 0.0 4.1 7.8 0.0 2.1 2 0 0 2 2 2 0 Replication protein A C terminal zf-B_box PF00643.19 gi|21226948|ref|NP_632870.1| - 5.4 6.9 6.0 0.99 9.3 1.5 1.9 2 1 0 2 2 2 0 B-box zinc finger Pyr_excise PF03013.9 gi|21226949|ref|NP_632871.1| - 3.9e-13 49.2 0.9 6.9e-13 48.5 0.6 1.4 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase UPF0242 PF06785.6 gi|21226949|ref|NP_632871.1| - 0.086 11.5 0.0 0.1 11.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) DUF1129 PF06570.6 gi|21226950|ref|NP_632872.1| - 0.018 14.3 0.5 0.027 13.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) PPC PF04151.10 gi|21226950|ref|NP_632872.1| - 0.021 15.7 0.1 0.71 10.8 0.1 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain DUF4131 PF13567.1 gi|21226950|ref|NP_632872.1| - 1.3 8.4 16.0 0.55 9.6 2.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) AhpC-TSA PF00578.16 gi|21226951|ref|NP_632873.1| - 3.2e-37 126.9 0.0 3.8e-37 126.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|21226951|ref|NP_632873.1| - 7.6e-20 70.9 0.0 9e-20 70.7 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.1 gi|21226951|ref|NP_632873.1| - 0.00018 21.5 0.0 0.00024 21.1 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like SCO1-SenC PF02630.9 gi|21226951|ref|NP_632873.1| - 0.00043 19.9 0.0 0.00076 19.1 0.0 1.3 1 1 0 1 1 1 1 SCO1/SenC AhpC-TSA_2 PF13911.1 gi|21226951|ref|NP_632873.1| - 0.018 14.9 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme DUF899 PF05988.7 gi|21226951|ref|NP_632873.1| - 0.045 13.1 0.0 0.051 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) DUF378 PF04070.7 gi|21226952|ref|NP_632874.1| - 4.4e-24 83.8 8.2 5e-24 83.7 5.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) IBV_3C PF03620.8 gi|21226952|ref|NP_632874.1| - 0.11 12.3 0.2 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 IBV 3C protein DUF751 PF05421.6 gi|21226952|ref|NP_632874.1| - 0.15 12.3 2.9 3.1 8.1 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF751) DUF981 PF06168.6 gi|21226952|ref|NP_632874.1| - 3 7.5 7.2 3.9 7.2 0.4 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF981) Tetraspannin PF00335.15 gi|21226953|ref|NP_632875.1| - 0.047 12.9 0.8 0.073 12.3 0.5 1.3 1 0 0 1 1 1 0 Tetraspanin family FAD_binding_7 PF03441.9 gi|21226954|ref|NP_632876.1| - 3.1e-42 144.7 0.1 4.4e-41 140.9 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.13 gi|21226954|ref|NP_632876.1| - 9.2e-31 106.8 0.0 4e-30 104.7 0.0 1.9 2 0 0 2 2 2 1 DNA photolyase Lactamase_B_2 PF12706.2 gi|21226955|ref|NP_632877.1| - 1.4e-25 90.0 0.5 1.7e-25 89.7 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21226955|ref|NP_632877.1| - 1.6e-20 73.5 0.6 2.4e-20 73.0 0.4 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|21226955|ref|NP_632877.1| - 1.2e-11 44.5 0.3 1.8e-11 43.9 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.24 gi|21226956|ref|NP_632878.1| - 3.2e-38 130.9 0.3 2.1e-37 128.2 0.0 2.3 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|21226956|ref|NP_632878.1| - 4.5e-08 33.9 3.2 3.2e-07 31.1 0.0 3.4 2 2 0 2 2 2 1 AAA domain AAA_5 PF07728.9 gi|21226956|ref|NP_632878.1| - 4e-06 26.5 0.0 2e-05 24.3 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|21226956|ref|NP_632878.1| - 4e-06 27.1 1.0 6.5e-05 23.2 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|21226956|ref|NP_632878.1| - 7.1e-05 22.8 2.4 0.0055 16.7 0.0 3.1 2 1 1 4 4 4 1 AAA ATPase domain AAA_33 PF13671.1 gi|21226956|ref|NP_632878.1| - 0.0001 22.1 0.0 0.00022 21.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.9 gi|21226956|ref|NP_632878.1| - 0.00014 21.8 1.4 0.00054 19.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|21226956|ref|NP_632878.1| - 0.00018 21.6 0.6 0.0065 16.6 0.1 3.1 3 1 0 3 3 2 1 AAA domain RuvB_N PF05496.7 gi|21226956|ref|NP_632878.1| - 0.00023 20.2 0.1 0.00048 19.2 0.1 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_25 PF13481.1 gi|21226956|ref|NP_632878.1| - 0.00063 19.2 0.9 0.051 12.9 0.0 2.6 2 1 1 3 3 3 1 AAA domain TIP49 PF06068.8 gi|21226956|ref|NP_632878.1| - 0.00068 18.4 0.1 0.0037 16.0 0.0 2.2 2 1 0 2 2 2 1 TIP49 C-terminus DUF815 PF05673.8 gi|21226956|ref|NP_632878.1| - 0.00082 18.3 0.1 0.0016 17.3 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_14 PF13173.1 gi|21226956|ref|NP_632878.1| - 0.00092 19.1 0.2 0.0071 16.2 0.0 2.4 2 2 0 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|21226956|ref|NP_632878.1| - 0.0012 18.8 0.0 0.0038 17.2 0.0 1.9 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|21226956|ref|NP_632878.1| - 0.0031 17.4 0.0 0.012 15.6 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase Mg_chelatase PF01078.16 gi|21226956|ref|NP_632878.1| - 0.0032 16.6 0.0 0.0092 15.1 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI SKI PF01202.17 gi|21226956|ref|NP_632878.1| - 0.0037 17.1 0.0 0.012 15.5 0.0 1.9 1 0 0 1 1 1 1 Shikimate kinase ResIII PF04851.10 gi|21226956|ref|NP_632878.1| - 0.0072 16.1 0.2 0.026 14.3 0.0 2.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.1 gi|21226956|ref|NP_632878.1| - 0.0085 15.6 0.1 0.03 13.9 0.0 1.9 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|21226956|ref|NP_632878.1| - 0.0087 15.4 0.0 0.023 14.1 0.0 1.7 1 1 0 1 1 1 1 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21226956|ref|NP_632878.1| - 0.013 15.2 0.1 0.049 13.3 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain AAA_23 PF13476.1 gi|21226956|ref|NP_632878.1| - 0.016 15.5 4.2 5.4 7.2 0.0 2.8 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.7 gi|21226956|ref|NP_632878.1| - 0.037 13.1 0.0 0.15 11.1 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_24 PF13479.1 gi|21226956|ref|NP_632878.1| - 0.045 13.3 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.1 gi|21226956|ref|NP_632878.1| - 0.048 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain CPT PF07931.7 gi|21226956|ref|NP_632878.1| - 0.065 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein RNA_helicase PF00910.17 gi|21226956|ref|NP_632878.1| - 0.11 12.6 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.21 gi|21226956|ref|NP_632878.1| - 0.13 11.7 0.0 0.37 10.2 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.22 gi|21226956|ref|NP_632878.1| - 0.14 12.4 0.1 0.52 10.6 0.0 2.1 2 0 0 2 2 2 0 ABC transporter Herpes_UL31 PF02718.9 gi|21226956|ref|NP_632878.1| - 0.14 10.7 0.6 0.24 10.0 0.4 1.3 1 0 0 1 1 1 0 Herpesvirus UL31-like protein SAICAR_synt PF01259.13 gi|21226957|ref|NP_632879.1| - 8.7e-57 192.0 0.1 9.8e-57 191.8 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF650 PF04894.7 gi|21226958|ref|NP_632880.1| - 4.2e-102 341.2 0.0 5.2e-102 340.9 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|21226958|ref|NP_632880.1| - 7.7e-39 131.7 0.0 1.2e-38 131.0 0.0 1.3 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) Sigma70_r4 PF04545.11 gi|21226959|ref|NP_632881.1| - 0.00059 19.1 0.0 0.0014 17.9 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.17 gi|21226959|ref|NP_632881.1| - 0.001 18.8 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4_2 PF08281.7 gi|21226959|ref|NP_632881.1| - 0.0029 17.0 0.0 0.0088 15.4 0.0 1.8 1 1 1 2 2 2 1 Sigma-70, region 4 HTH_Crp_2 PF13545.1 gi|21226959|ref|NP_632881.1| - 0.013 15.2 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|21226959|ref|NP_632881.1| - 0.022 14.1 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|21226959|ref|NP_632881.1| - 0.022 14.3 0.0 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_19 PF12844.2 gi|21226959|ref|NP_632881.1| - 0.033 14.2 0.0 0.09 12.8 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain MarR_2 PF12802.2 gi|21226959|ref|NP_632881.1| - 0.037 13.6 0.0 0.065 12.9 0.0 1.5 1 0 0 1 1 1 0 MarR family Phage_NinH PF06322.6 gi|21226959|ref|NP_632881.1| - 0.074 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Phage NinH protein HTH_31 PF13560.1 gi|21226959|ref|NP_632881.1| - 0.1 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_37 PF13744.1 gi|21226959|ref|NP_632881.1| - 0.13 12.0 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain SUI1 PF01253.17 gi|21226960|ref|NP_632882.1| - 8.7e-24 83.1 0.4 1e-23 82.9 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 TrmB PF01978.14 gi|21226961|ref|NP_632883.1| - 1.6e-06 27.7 0.5 2.1e-06 27.3 0.4 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|21226961|ref|NP_632883.1| - 4.4e-06 26.4 1.1 5.2e-06 26.1 0.7 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_20 PF12840.2 gi|21226961|ref|NP_632883.1| - 0.0001 22.0 0.0 0.00014 21.5 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|21226961|ref|NP_632883.1| - 0.0001 21.9 0.2 0.00014 21.5 0.1 1.2 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|21226961|ref|NP_632883.1| - 0.00019 21.3 0.3 0.00031 20.7 0.2 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|21226961|ref|NP_632883.1| - 0.00027 21.1 0.1 0.00033 20.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.12 gi|21226961|ref|NP_632883.1| - 0.0003 20.2 0.3 0.00032 20.1 0.2 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit Fe_dep_repress PF01325.14 gi|21226961|ref|NP_632883.1| - 0.0026 17.6 0.7 0.0054 16.6 0.2 1.7 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain DUF4364 PF14277.1 gi|21226961|ref|NP_632883.1| - 0.007 15.9 0.5 0.01 15.4 0.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_24 PF13412.1 gi|21226961|ref|NP_632883.1| - 0.0075 15.6 0.3 0.01 15.1 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DDE_Tnp_2 PF04693.7 gi|21226961|ref|NP_632883.1| - 0.0098 14.9 0.1 0.011 14.7 0.1 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DUF3895 PF13034.1 gi|21226961|ref|NP_632883.1| - 0.01 15.3 0.1 0.013 14.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3895) Penicillinase_R PF03965.11 gi|21226961|ref|NP_632883.1| - 0.017 15.2 0.2 0.024 14.6 0.1 1.2 1 0 0 1 1 1 0 Penicillinase repressor DUF2250 PF10007.4 gi|21226961|ref|NP_632883.1| - 0.018 14.9 0.2 0.023 14.5 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_DeoR PF08220.7 gi|21226961|ref|NP_632883.1| - 0.022 14.3 0.1 0.039 13.4 0.1 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Syntaxin-6_N PF09177.6 gi|21226961|ref|NP_632883.1| - 0.047 14.0 0.1 0.057 13.8 0.1 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DUF1495 PF07381.6 gi|21226961|ref|NP_632883.1| - 0.048 13.3 1.0 1.6 8.4 0.1 2.0 1 1 1 2 2 2 0 Winged helix DNA-binding domain (DUF1495) HemN_C PF06969.11 gi|21226961|ref|NP_632883.1| - 0.051 13.6 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 HemN C-terminal domain Ftsk_gamma PF09397.5 gi|21226961|ref|NP_632883.1| - 0.052 13.2 0.0 0.077 12.7 0.0 1.4 1 1 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.12 gi|21226961|ref|NP_632883.1| - 0.054 13.1 0.8 0.16 11.6 0.5 1.8 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_5 PF01022.15 gi|21226961|ref|NP_632883.1| - 0.072 12.7 0.2 0.092 12.4 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.9 gi|21226961|ref|NP_632883.1| - 0.082 12.6 0.7 0.29 10.9 0.5 2.0 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_11 PF08279.7 gi|21226961|ref|NP_632883.1| - 0.13 11.9 0.4 0.26 10.9 0.3 1.6 1 1 0 1 1 1 0 HTH domain TBPIP PF07106.8 gi|21226961|ref|NP_632883.1| - 0.14 11.7 1.9 0.7 9.4 0.7 1.9 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) AIRS_C PF02769.17 gi|21226962|ref|NP_632884.1| - 5.4e-45 153.1 6.4 1.3e-29 103.2 0.2 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|21226962|ref|NP_632884.1| - 1e-43 147.5 2.4 5.4e-26 90.6 0.1 3.5 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain Glyco_hydro_57 PF03065.10 gi|21226963|ref|NP_632885.1| - 4.4e-48 164.0 0.0 8.1e-47 159.8 0.0 2.0 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.10 gi|21226964|ref|NP_632886.1| - 1.9e-76 257.3 0.1 2.5e-75 253.6 0.1 2.1 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.16 gi|21226964|ref|NP_632886.1| - 5.3e-05 22.8 0.0 8.4e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase BTAD PF03704.12 gi|21226964|ref|NP_632886.1| - 0.082 13.2 0.1 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial transcriptional activator domain V4R PF02830.13 gi|21226965|ref|NP_632887.1| - 3.7e-19 68.3 0.0 7.4e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 V4R domain Glyco_hydro_15 PF00723.16 gi|21226966|ref|NP_632888.1| - 1.1e-13 50.5 0.0 5.8e-07 28.4 0.1 3.4 2 1 1 3 3 3 3 Glycosyl hydrolases family 15 DUF608 PF04685.8 gi|21226966|ref|NP_632888.1| - 3.8e-06 25.8 0.1 7.2e-06 24.9 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF608 Prenyltrans_2 PF13249.1 gi|21226966|ref|NP_632888.1| - 0.0005 20.4 0.6 0.084 13.2 0.1 2.9 2 1 1 3 3 3 2 Prenyltransferase-like DUF3938 PF13074.1 gi|21226966|ref|NP_632888.1| - 0.023 14.5 0.0 0.091 12.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) Prenyltrans_1 PF13243.1 gi|21226966|ref|NP_632888.1| - 0.12 12.4 0.9 0.71 9.9 0.6 2.3 1 1 0 1 1 1 0 Prenyltransferase-like tRNA-synt_2b PF00587.20 gi|21226967|ref|NP_632889.1| - 1.9e-36 125.2 0.0 2.9e-36 124.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|21226967|ref|NP_632889.1| - 1.1e-30 105.8 2.4 1.8e-30 105.1 1.6 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Laminin_I PF06008.9 gi|21226967|ref|NP_632889.1| - 0.06 12.6 0.1 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Laminin Domain I Phage_GP20 PF06810.6 gi|21226967|ref|NP_632889.1| - 0.088 12.2 2.2 0.15 11.5 1.5 1.2 1 0 0 1 1 1 0 Phage minor structural protein GP20 DivIC PF04977.10 gi|21226967|ref|NP_632889.1| - 0.38 10.2 4.1 0.71 9.3 1.6 2.0 1 1 1 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.3 gi|21226967|ref|NP_632889.1| - 8.3 6.2 7.7 0.45 10.3 1.4 1.8 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Peptidase_S49 PF01343.13 gi|21226968|ref|NP_632890.1| - 7.2e-45 152.5 0.2 1.4e-44 151.5 0.1 1.5 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.18 gi|21226968|ref|NP_632890.1| - 2.6e-05 23.9 1.6 0.0022 17.6 0.3 2.3 2 0 0 2 2 2 2 Clp protease Ligase_CoA PF00549.14 gi|21226968|ref|NP_632890.1| - 0.01 15.4 0.1 0.022 14.3 0.1 1.5 1 0 0 1 1 1 0 CoA-ligase Zip PF02535.17 gi|21226968|ref|NP_632890.1| - 0.037 13.0 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter p25-alpha PF05517.7 gi|21226968|ref|NP_632890.1| - 0.054 13.7 0.1 5.4 7.2 0.0 2.3 2 0 0 2 2 2 0 p25-alpha Peptidase_S8 PF00082.17 gi|21226968|ref|NP_632890.1| - 0.092 11.8 6.3 0.14 11.2 4.3 1.4 1 1 0 1 1 1 0 Subtilase family DUF912 PF06024.7 gi|21226968|ref|NP_632890.1| - 0.12 12.4 0.1 0.3 11.1 0.1 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF912) tRNA-synt_1g PF09334.6 gi|161485679|ref|NP_632891.2| - 5.6e-147 489.4 0.0 7e-147 489.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.15 gi|161485679|ref|NP_632891.2| - 2.5e-26 91.3 0.4 2.5e-26 91.3 0.3 2.3 3 0 0 3 3 3 1 Putative tRNA binding domain tRNA-synt_1 PF00133.17 gi|161485679|ref|NP_632891.2| - 4.5e-20 71.2 0.0 9.6e-11 40.3 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|161485679|ref|NP_632891.2| - 6.9e-20 71.3 0.1 1.1e-19 70.6 0.0 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.14 gi|161485679|ref|NP_632891.2| - 3.3e-16 59.2 0.0 3.4e-10 39.5 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|161485679|ref|NP_632891.2| - 0.0053 15.4 0.0 0.062 11.9 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|161485679|ref|NP_632891.2| - 0.033 13.0 0.0 3.4 6.3 0.0 2.6 2 1 1 3 3 3 0 tRNA synthetases class I (R) DZR PF12773.2 gi|161485679|ref|NP_632891.2| - 0.34 10.7 9.8 2.5 7.9 7.0 2.1 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|161485679|ref|NP_632891.2| - 5.3 6.3 14.0 5.3 6.3 3.9 3.2 2 1 1 3 3 3 0 zinc-ribbon domain CYTH PF01928.16 gi|21226970|ref|NP_632892.1| - 8.8e-42 142.8 0.2 9.8e-42 142.7 0.2 1.0 1 0 0 1 1 1 1 CYTH domain DUF35 PF01796.12 gi|21226971|ref|NP_632893.1| - 2.8e-17 62.6 0.0 3.8e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|21226971|ref|NP_632893.1| - 1.7e-11 43.6 1.0 2.7e-11 43.0 0.7 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-dskA_traR PF01258.12 gi|21226971|ref|NP_632893.1| - 0.047 13.4 2.9 0.087 12.5 2.0 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.2 gi|21226971|ref|NP_632893.1| - 0.086 12.6 1.1 0.13 12.0 0.8 1.2 1 0 0 1 1 1 0 Double zinc ribbon Thiolase_C PF02803.13 gi|21226972|ref|NP_632894.1| - 3.7e-12 45.7 3.0 1.8e-11 43.5 1.3 2.7 2 1 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|21226972|ref|NP_632894.1| - 1.1e-11 44.2 2.5 1.1e-10 40.9 0.8 2.2 2 0 0 2 2 2 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|21226972|ref|NP_632894.1| - 0.00015 21.3 4.8 0.00015 21.3 3.4 1.8 2 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.17 gi|21226972|ref|NP_632894.1| - 0.038 13.8 0.1 0.038 13.8 0.1 3.1 4 0 0 4 4 4 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.5 gi|21226972|ref|NP_632894.1| - 0.18 11.4 4.4 0.33 10.6 0.7 2.6 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.5 gi|21226973|ref|NP_632895.1| - 6.6e-11 42.0 0.0 1.5e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.5 gi|21226973|ref|NP_632895.1| - 5.4e-06 26.0 0.0 0.00024 20.7 0.0 2.1 1 1 1 2 2 2 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.12 gi|21226973|ref|NP_632895.1| - 0.00014 21.4 0.2 0.0002 20.9 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.5 gi|21226973|ref|NP_632895.1| - 0.0087 15.7 2.9 0.0087 15.7 2.0 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.18 gi|21226973|ref|NP_632895.1| - 0.075 11.9 0.7 0.12 11.3 0.5 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain HTH_3 PF01381.17 gi|21226974|ref|NP_632896.1| - 3.5e-08 33.1 0.0 1.6e-07 31.0 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|21226974|ref|NP_632896.1| - 1.6e-07 31.2 0.0 4.5e-07 29.8 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|21226974|ref|NP_632896.1| - 0.0021 18.2 0.0 0.0061 16.7 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain NUMOD1 PF07453.8 gi|21226974|ref|NP_632896.1| - 0.042 13.6 0.1 0.13 12.1 0.0 1.9 2 0 0 2 2 2 0 NUMOD1 domain Cas_Cas4 PF01930.12 gi|21226975|ref|NP_632897.1| - 1.7e-10 41.0 0.1 1.4e-08 34.8 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF83 DUF1258 PF06869.7 gi|21226976|ref|NP_632898.1| - 0.062 12.3 0.0 0.086 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) DUF4026 PF13218.1 gi|21226978|ref|NP_632900.1| - 0.078 11.8 0.1 0.1 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) DDE_Tnp_1 PF01609.16 gi|21226979|ref|NP_632901.1| - 1e-05 25.2 0.0 1.6e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain Plasmid_parti PF01672.11 gi|21226980|ref|NP_632902.1| - 0.065 13.6 0.1 0.065 13.6 0.1 1.0 1 0 0 1 1 1 0 Putative plasmid partition protein DUF996 PF06195.8 gi|21226981|ref|NP_632903.1| - 0.011 15.7 1.6 0.013 15.4 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF996) RseC_MucC PF04246.7 gi|21226981|ref|NP_632903.1| - 0.12 11.9 1.5 0.14 11.6 1.0 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1571 PF07608.6 gi|21226982|ref|NP_632904.1| - 2.8e-05 23.3 0.0 6.5e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) LolA PF03548.10 gi|21226982|ref|NP_632904.1| - 3.4e-05 23.5 0.0 0.00012 21.7 0.0 1.9 1 1 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF1329 PF07044.6 gi|21226982|ref|NP_632904.1| - 0.00048 19.1 0.2 0.0016 17.4 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1329) MucB_RseB PF03888.9 gi|21226982|ref|NP_632904.1| - 0.011 14.7 0.0 0.028 13.4 0.0 1.6 1 1 1 2 2 2 0 MucB/RseB family DUF3139 PF11337.3 gi|21226982|ref|NP_632904.1| - 0.091 13.0 0.3 0.091 13.0 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) MULE PF10551.4 gi|21226983|ref|NP_632905.1| - 3.6e-11 43.0 0.0 8.4e-11 41.8 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21226983|ref|NP_632905.1| - 0.0001 21.6 1.6 0.0006 19.1 1.1 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21226983|ref|NP_632905.1| - 0.023 14.2 1.9 0.033 13.7 0.6 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-ribbon_3 PF13248.1 gi|21226983|ref|NP_632905.1| - 0.57 9.4 2.7 0.28 10.4 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain DUF3038 PF11237.3 gi|21226984|ref|NP_632906.1| - 0.061 13.1 0.4 6.2 6.5 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3038) Scm3 PF10384.4 gi|21226984|ref|NP_632906.1| - 0.08 12.4 4.6 2.2 7.8 0.3 2.6 2 0 0 2 2 2 0 Centromere protein Scm3 DUF3613 PF12266.3 gi|21226984|ref|NP_632906.1| - 0.25 10.8 2.6 2.2 7.8 0.0 3.5 4 1 0 4 4 4 0 Protein of unknown function (DUF3613) DUF883 PF05957.8 gi|21226984|ref|NP_632906.1| - 0.35 11.2 5.9 6 7.3 0.3 2.7 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) CCDC84 PF14968.1 gi|21226984|ref|NP_632906.1| - 2.9 7.2 5.6 10 5.5 0.3 2.2 2 0 0 2 2 2 0 Coiled coil protein 84 PAPS_reduct PF01507.14 gi|21226985|ref|NP_632907.1| - 3.9e-40 137.5 0.0 6.5e-40 136.7 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.15 gi|21226985|ref|NP_632907.1| - 8.5e-21 73.4 0.1 1.9e-20 72.3 0.1 1.6 1 0 0 1 1 1 1 PUA domain Fer4 PF00037.22 gi|21226985|ref|NP_632907.1| - 1.3e-08 34.0 15.4 5.3e-05 22.6 2.1 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21226985|ref|NP_632907.1| - 6.9e-07 29.4 6.8 6.9e-07 29.4 4.7 2.3 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21226985|ref|NP_632907.1| - 7.5e-07 29.4 11.8 7.5e-07 29.4 8.2 2.2 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21226985|ref|NP_632907.1| - 9.1e-07 28.4 13.4 8.7e-05 22.2 1.5 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21226985|ref|NP_632907.1| - 0.00012 21.7 11.4 0.0005 19.8 7.9 2.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21226985|ref|NP_632907.1| - 0.00013 21.7 10.1 0.00013 21.7 7.0 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21226985|ref|NP_632907.1| - 0.00043 20.2 11.5 0.0025 17.8 8.0 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21226985|ref|NP_632907.1| - 0.00061 19.5 2.5 0.00061 19.5 1.7 3.6 4 0 0 4 4 3 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21226985|ref|NP_632907.1| - 0.0062 16.7 3.1 0.0062 16.7 2.2 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21226985|ref|NP_632907.1| - 0.013 15.8 12.0 0.32 11.3 2.2 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21226985|ref|NP_632907.1| - 0.014 16.1 3.2 0.014 16.1 2.2 3.8 4 1 1 5 5 2 0 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|21226985|ref|NP_632907.1| - 0.019 15.5 5.8 0.019 15.5 4.0 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21226985|ref|NP_632907.1| - 0.032 14.6 13.4 1.3 9.4 1.1 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain S19 PF06756.6 gi|21226985|ref|NP_632907.1| - 0.049 13.4 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Chorion protein S19 C-terminal Fer4_15 PF13459.1 gi|21226985|ref|NP_632907.1| - 6.1 7.4 15.0 17 6.0 2.2 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain Inhibitor_I42 PF09394.5 gi|21226986|ref|NP_632908.1| - 5.3e-17 61.9 0.0 6.1e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 IMS PF00817.15 gi|21226988|ref|NP_632910.1| - 5.3e-40 136.6 0.0 1e-39 135.7 0.0 1.5 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.3 gi|21226988|ref|NP_632910.1| - 4.1e-14 52.6 0.4 6.6e-14 51.9 0.3 1.3 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|21226988|ref|NP_632910.1| - 2.1e-11 43.1 0.1 7.3e-11 41.4 0.0 2.0 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|21226988|ref|NP_632910.1| - 1.8e-05 24.8 0.2 4.3e-05 23.6 0.1 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.4 gi|21226988|ref|NP_632910.1| - 0.00066 19.1 0.0 0.0016 17.9 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.3 gi|21226988|ref|NP_632910.1| - 0.013 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DUF1805 PF08827.6 gi|21226988|ref|NP_632910.1| - 0.077 12.7 0.0 1.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) ABC_tran PF00005.22 gi|21226989|ref|NP_632911.1| - 2.7e-32 111.9 0.0 4e-32 111.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21226989|ref|NP_632911.1| - 1.8e-16 60.9 0.5 6.8e-12 45.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21226989|ref|NP_632911.1| - 7.9e-09 35.0 0.0 2.4e-08 33.5 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21226989|ref|NP_632911.1| - 0.0015 18.0 0.0 0.0028 17.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|21226989|ref|NP_632911.1| - 0.0023 17.4 0.1 1.8 7.9 0.1 2.2 1 1 0 2 2 2 2 AAA-like domain SbcCD_C PF13558.1 gi|21226989|ref|NP_632911.1| - 0.0028 17.5 0.0 0.043 13.7 0.0 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.1 gi|21226989|ref|NP_632911.1| - 0.0079 15.2 0.0 1.2 8.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain MMR_HSR1 PF01926.18 gi|21226989|ref|NP_632911.1| - 0.023 14.6 0.2 0.21 11.5 0.1 2.3 2 1 0 2 2 2 0 50S ribosome-binding GTPase BCA_ABC_TP_C PF12399.3 gi|21226989|ref|NP_632911.1| - 0.029 14.0 0.0 0.078 12.6 0.0 1.8 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter AAA_28 PF13521.1 gi|21226989|ref|NP_632911.1| - 0.046 13.6 0.5 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|21226989|ref|NP_632911.1| - 0.047 14.0 0.0 0.082 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|21226989|ref|NP_632911.1| - 0.057 12.5 0.1 0.13 11.4 0.0 1.6 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI DUF258 PF03193.11 gi|21226989|ref|NP_632911.1| - 0.062 12.4 0.0 0.095 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Miro PF08477.8 gi|21226989|ref|NP_632911.1| - 0.078 13.4 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein CbiQ PF02361.11 gi|21226990|ref|NP_632912.1| - 3e-30 105.4 6.0 3.9e-30 105.1 4.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein Ytp1 PF10355.4 gi|21226990|ref|NP_632912.1| - 0.14 11.2 0.8 0.23 10.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (Ytp1) PAS_3 PF08447.6 gi|21226991|ref|NP_632913.1| - 1.9e-40 136.8 0.4 6.8e-21 74.1 0.0 2.8 2 0 0 2 2 2 2 PAS fold HisKA_2 PF07568.7 gi|21226991|ref|NP_632913.1| - 1e-31 108.6 1.4 1e-31 108.6 1.0 2.2 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|21226991|ref|NP_632913.1| - 1.6e-16 60.5 0.2 5.3e-07 29.9 0.0 3.6 3 1 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|21226991|ref|NP_632913.1| - 6.1e-13 48.4 0.7 1.7e-12 47.0 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|21226991|ref|NP_632913.1| - 2.1e-09 37.1 0.1 0.00032 20.4 0.0 3.0 3 0 0 3 3 3 2 PAS fold HATPase_c_2 PF13581.1 gi|21226991|ref|NP_632913.1| - 8.9e-08 31.9 0.0 2.1e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.5 gi|21226991|ref|NP_632913.1| - 0.0002 21.3 0.0 0.016 15.2 0.0 2.5 2 0 0 2 2 2 1 PAS fold HWE_HK PF07536.9 gi|21226991|ref|NP_632913.1| - 0.00041 20.7 2.0 0.00054 20.3 0.3 2.1 2 0 0 2 2 1 1 HWE histidine kinase HATPase_c_3 PF13589.1 gi|21226991|ref|NP_632913.1| - 0.0041 16.7 0.1 0.01 15.4 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4468 PF14730.1 gi|21226991|ref|NP_632913.1| - 0.0079 15.8 0.4 1.6 8.5 0.0 3.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4468) with TBP-like fold MEDS PF14417.1 gi|21226991|ref|NP_632913.1| - 0.0089 15.1 0.0 0.019 14.0 0.0 1.6 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain NAS PF03059.11 gi|21226992|ref|NP_632914.1| - 1.6e-32 112.8 0.0 2e-32 112.4 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein Methyltransf_26 PF13659.1 gi|21226992|ref|NP_632914.1| - 0.0073 16.3 0.0 0.02 14.9 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226992|ref|NP_632914.1| - 0.0096 16.4 0.0 0.018 15.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NAS PF03059.11 gi|21226993|ref|NP_632915.1| - 2.9e-18 66.0 0.0 3.7e-18 65.6 0.0 1.2 1 0 0 1 1 1 1 Nicotianamine synthase protein Methyltransf_18 PF12847.2 gi|21226993|ref|NP_632915.1| - 6.1e-07 30.0 0.0 1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226993|ref|NP_632915.1| - 3.6e-06 26.6 0.0 6.2e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21226993|ref|NP_632915.1| - 0.008 16.1 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|21226993|ref|NP_632915.1| - 0.015 14.9 0.0 0.021 14.4 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_3 PF01596.12 gi|21226993|ref|NP_632915.1| - 0.02 13.9 0.0 0.025 13.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_25 PF13649.1 gi|21226993|ref|NP_632915.1| - 0.062 13.6 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21226993|ref|NP_632915.1| - 0.074 13.5 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Vel1p PF10339.4 gi|21226993|ref|NP_632915.1| - 0.096 11.8 0.1 0.16 11.1 0.1 1.4 1 0 0 1 1 1 0 Yeast-specific zinc responsive Methyltransf_11 PF08241.7 gi|21226994|ref|NP_632916.1| - 2.8e-26 91.8 0.0 4.1e-26 91.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21226994|ref|NP_632916.1| - 5.7e-23 81.1 0.0 7.7e-23 80.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21226994|ref|NP_632916.1| - 1.9e-17 63.1 0.0 2.5e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|21226994|ref|NP_632916.1| - 9.3e-16 57.9 0.0 1.3e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21226994|ref|NP_632916.1| - 2e-15 57.3 0.0 3.4e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21226994|ref|NP_632916.1| - 3.1e-15 56.3 0.0 5e-15 55.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21226994|ref|NP_632916.1| - 4.6e-13 49.2 0.0 1.5e-12 47.5 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21226994|ref|NP_632916.1| - 9.4e-12 45.2 0.0 1.6e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21226994|ref|NP_632916.1| - 4.3e-08 32.7 0.0 8.9e-08 31.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|21226994|ref|NP_632916.1| - 2.4e-06 26.9 0.0 3.3e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.14 gi|21226994|ref|NP_632916.1| - 1.4e-05 24.7 0.0 2.1e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.7 gi|21226994|ref|NP_632916.1| - 2.8e-05 23.6 0.0 4.5e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.6 gi|21226994|ref|NP_632916.1| - 3.6e-05 23.2 0.0 5.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.1 gi|21226994|ref|NP_632916.1| - 6.5e-05 22.6 0.0 9.8e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|21226994|ref|NP_632916.1| - 0.00083 18.5 0.0 0.0013 17.8 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB TPMT PF05724.6 gi|21226994|ref|NP_632916.1| - 0.00093 18.6 0.0 0.0021 17.5 0.0 1.6 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_15 PF09445.5 gi|21226994|ref|NP_632916.1| - 0.0018 17.8 0.0 0.0028 17.2 0.0 1.4 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.15 gi|21226994|ref|NP_632916.1| - 0.0035 16.4 0.0 0.0053 15.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_8 PF05148.10 gi|21226994|ref|NP_632916.1| - 0.005 16.5 0.0 0.0093 15.6 0.0 1.5 1 1 0 1 1 1 1 Hypothetical methyltransferase CMAS PF02353.15 gi|21226994|ref|NP_632916.1| - 0.0091 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Mur_ligase PF01225.20 gi|21226994|ref|NP_632916.1| - 0.0093 16.0 0.0 0.027 14.5 0.0 1.9 2 0 0 2 2 1 1 Mur ligase family, catalytic domain UPF0020 PF01170.13 gi|21226994|ref|NP_632916.1| - 0.011 15.3 0.0 0.018 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GidB PF02527.10 gi|21226994|ref|NP_632916.1| - 0.04 13.0 0.0 0.098 11.7 0.0 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G CbiM PF01891.11 gi|21226995|ref|NP_632917.1| - 5.7e-58 195.8 23.3 6.4e-58 195.7 16.2 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region PDGLE PF13190.1 gi|21226996|ref|NP_632918.1| - 1.6e-17 62.9 2.5 1.9e-17 62.7 1.7 1.0 1 0 0 1 1 1 1 PDGLE domain DUF2273 PF10031.4 gi|21226996|ref|NP_632918.1| - 2.4 7.8 6.0 3.8 7.2 1.2 2.2 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) HhH-GPD PF00730.20 gi|21226997|ref|NP_632919.1| - 1.1e-21 77.0 0.1 1.5e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|21226997|ref|NP_632919.1| - 5.9e-09 35.1 0.0 1.9e-08 33.5 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.4 gi|21226997|ref|NP_632919.1| - 0.00017 21.6 4.5 0.0003 20.8 3.1 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.1 gi|21226997|ref|NP_632919.1| - 0.00072 19.6 0.0 0.46 10.6 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix domain Pyr_redox_dim PF02852.17 gi|21226998|ref|NP_632920.1| - 1.4e-16 60.4 0.0 1.7e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.9 gi|21226999|ref|NP_632921.1| - 1.1e-30 106.9 0.0 1.5e-30 106.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|21226999|ref|NP_632921.1| - 5.1e-17 62.0 0.3 9e-15 54.8 0.0 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|21226999|ref|NP_632921.1| - 1.4e-08 34.0 0.2 0.00048 19.1 0.1 2.4 2 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|21226999|ref|NP_632921.1| - 1.5e-07 31.6 0.0 0.00024 21.2 0.0 2.4 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|21226999|ref|NP_632921.1| - 7.5e-05 21.3 0.1 0.27 9.6 0.0 2.4 2 0 0 2 2 2 2 HI0933-like protein GDI PF00996.13 gi|21226999|ref|NP_632921.1| - 0.0014 17.0 0.0 0.0019 16.5 0.0 1.2 1 0 0 1 1 1 1 GDP dissociation inhibitor FAD_oxidored PF12831.2 gi|21226999|ref|NP_632921.1| - 0.003 16.6 0.4 0.47 9.4 0.0 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21226999|ref|NP_632921.1| - 0.0072 15.2 0.7 0.041 12.7 0.0 2.2 2 1 1 3 3 3 1 FAD binding domain 2-Hacid_dh_C PF02826.14 gi|21226999|ref|NP_632921.1| - 0.019 14.1 0.0 0.16 11.1 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amino_oxidase PF01593.19 gi|21226999|ref|NP_632921.1| - 0.035 13.1 0.1 0.2 10.7 0.0 2.0 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.14 gi|21226999|ref|NP_632921.1| - 0.051 12.6 0.0 3.3 6.6 0.0 2.3 2 0 0 2 2 2 0 FAD binding domain NAD_binding_8 PF13450.1 gi|21226999|ref|NP_632921.1| - 0.056 13.4 0.6 0.46 10.5 0.1 2.5 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.13 gi|21226999|ref|NP_632921.1| - 0.062 13.2 0.3 0.27 11.2 0.0 2.2 2 1 1 3 3 3 0 TrkA-N domain XdhC_C PF13478.1 gi|21226999|ref|NP_632921.1| - 0.063 13.5 0.0 2 8.7 0.0 2.3 2 0 0 2 2 2 0 XdhC Rossmann domain Lycopene_cycl PF05834.7 gi|21226999|ref|NP_632921.1| - 0.074 11.9 0.1 0.15 10.9 0.0 1.5 1 0 0 1 1 1 0 Lycopene cyclase protein Thi4 PF01946.12 gi|21226999|ref|NP_632921.1| - 0.094 11.7 0.2 0.33 10.0 0.0 1.9 2 0 0 2 2 2 0 Thi4 family E1-N PF14463.1 gi|21226999|ref|NP_632921.1| - 0.13 11.8 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 E1 N-terminal domain AICARFT_IMPCHas PF01808.13 gi|21227000|ref|NP_632922.1| - 2.6e-90 302.7 0.0 3.3e-90 302.3 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.17 gi|21227000|ref|NP_632922.1| - 2.2e-26 91.6 0.0 3.8e-26 90.8 0.0 1.4 1 0 0 1 1 1 1 MGS-like domain MgsA_C PF12002.3 gi|21227000|ref|NP_632922.1| - 0.0016 18.1 0.0 0.0045 16.7 0.0 1.7 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DUF1724 PF08350.5 gi|21227001|ref|NP_632923.1| - 2.9e-23 81.1 0.5 7e-23 79.9 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_24 PF13412.1 gi|21227001|ref|NP_632923.1| - 0.0034 16.7 0.1 0.029 13.7 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|21227001|ref|NP_632923.1| - 0.011 15.3 0.0 0.023 14.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227001|ref|NP_632923.1| - 0.068 12.9 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain UbiA PF01040.13 gi|21227002|ref|NP_632924.1| - 1.6e-29 102.9 7.4 1.9e-29 102.6 5.1 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family E1-E2_ATPase PF00122.15 gi|21227003|ref|NP_632925.1| - 4.2e-67 225.5 9.4 4.2e-67 225.5 6.5 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|21227003|ref|NP_632925.1| - 3.5e-42 143.9 9.6 9.5e-42 142.5 6.7 1.8 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|21227003|ref|NP_632925.1| - 1.2e-31 110.8 0.1 7.9e-31 108.1 0.1 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|21227003|ref|NP_632925.1| - 8.2e-20 70.0 0.1 4.1e-19 67.7 0.0 2.2 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_like2 PF13246.1 gi|21227003|ref|NP_632925.1| - 6.8e-15 54.8 0.1 1.5e-14 53.6 0.0 1.6 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|21227003|ref|NP_632925.1| - 2.6e-14 53.8 0.0 8.3e-14 52.1 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227003|ref|NP_632925.1| - 2.3e-07 30.6 0.3 0.00012 21.7 0.2 2.6 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|21227003|ref|NP_632925.1| - 0.0044 17.2 0.0 0.0096 16.1 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Methyltransf_18 PF12847.2 gi|21227004|ref|NP_632926.1| - 5e-12 46.3 0.0 1e-11 45.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21227004|ref|NP_632926.1| - 5.5e-08 32.1 0.0 7.9e-08 31.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.1 gi|21227004|ref|NP_632926.1| - 4.4e-07 29.7 0.0 7.1e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227004|ref|NP_632926.1| - 4.5e-07 29.5 0.0 9.2e-07 28.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21227004|ref|NP_632926.1| - 4.9e-07 29.4 0.0 7.7e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|21227004|ref|NP_632926.1| - 1e-06 29.1 0.0 2e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|21227004|ref|NP_632926.1| - 4.3e-06 26.3 0.0 8.5e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_26 PF13659.1 gi|21227004|ref|NP_632926.1| - 1e-05 25.5 0.0 1.4e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227004|ref|NP_632926.1| - 3.1e-05 24.2 0.0 6.7e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21227004|ref|NP_632926.1| - 0.0001 21.7 0.0 0.00022 20.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain GidB PF02527.10 gi|21227004|ref|NP_632926.1| - 0.00015 20.9 0.0 0.00036 19.7 0.0 1.6 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G Methyltransf_11 PF08241.7 gi|21227004|ref|NP_632926.1| - 0.00021 21.7 0.0 0.0004 20.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|21227004|ref|NP_632926.1| - 0.00055 19.4 0.1 0.00083 18.8 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase CMAS PF02353.15 gi|21227004|ref|NP_632926.1| - 0.0012 17.9 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase DREV PF05219.7 gi|21227004|ref|NP_632926.1| - 0.0014 17.5 0.0 0.0021 16.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Cons_hypoth95 PF03602.10 gi|21227004|ref|NP_632926.1| - 0.0038 16.6 0.0 0.0066 15.8 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.13 gi|21227004|ref|NP_632926.1| - 0.0073 15.4 0.0 0.01 14.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.12 gi|21227004|ref|NP_632926.1| - 0.02 13.9 0.1 0.058 12.4 0.1 1.8 1 1 0 1 1 1 0 Putative methyltransferase PrmA PF06325.8 gi|21227004|ref|NP_632926.1| - 0.022 13.9 0.0 0.05 12.7 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF938 PF06080.7 gi|21227004|ref|NP_632926.1| - 0.031 13.8 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Met_10 PF02475.11 gi|21227004|ref|NP_632926.1| - 0.073 12.6 0.0 0.17 11.4 0.0 1.5 1 1 0 1 1 1 0 Met-10+ like-protein Phage_Coat_A PF05357.8 gi|21227004|ref|NP_632926.1| - 0.093 12.3 0.4 15 5.2 0.0 2.5 2 0 0 2 2 2 0 Phage Coat Protein A P21-Arc PF04062.9 gi|21227004|ref|NP_632926.1| - 0.1 12.3 0.0 2.3 7.9 0.0 2.5 2 1 1 3 3 3 0 ARP2/3 complex ARPC3 (21 kDa) subunit Grp1_Fun34_YaaH PF01184.14 gi|21227005|ref|NP_632927.1| - 2.8e-56 190.1 17.9 3.3e-56 189.9 12.4 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Tetraspannin PF00335.15 gi|21227005|ref|NP_632927.1| - 1.8 7.8 9.3 2.6 7.2 6.3 1.4 1 1 0 1 1 1 0 Tetraspanin family iPGM_N PF06415.8 gi|21227006|ref|NP_632928.1| - 5.9e-93 310.3 0.0 8.1e-93 309.8 0.0 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.13 gi|21227006|ref|NP_632928.1| - 4.4e-86 288.3 0.0 5.1e-86 288.1 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|21227006|ref|NP_632928.1| - 9.2e-07 28.4 0.0 1.3e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|21227006|ref|NP_632928.1| - 0.0023 17.1 0.0 0.0052 16.0 0.0 1.6 1 0 0 1 1 1 1 Sulfatase PglZ PF08665.7 gi|21227006|ref|NP_632928.1| - 0.019 14.6 0.1 0.033 13.8 0.1 1.4 1 0 0 1 1 1 0 PglZ domain DUF1554 PF07588.6 gi|21227006|ref|NP_632928.1| - 0.13 11.7 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1554) GHMP_kinases_N PF00288.21 gi|21227007|ref|NP_632929.1| - 9e-07 28.8 0.3 1.8e-06 27.9 0.2 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|21227007|ref|NP_632929.1| - 1.3e-05 25.3 0.0 3.3e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal XPG_I PF00867.13 gi|21227008|ref|NP_632930.1| - 2.5e-27 94.7 0.3 7.7e-27 93.1 0.0 1.9 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.12 gi|21227008|ref|NP_632930.1| - 2.6e-20 72.5 0.0 5.3e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.15 gi|21227008|ref|NP_632930.1| - 6.3e-05 23.1 0.6 0.00015 21.9 0.0 1.9 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.2 gi|21227008|ref|NP_632930.1| - 0.023 14.5 0.0 0.047 13.5 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif Herpes_U26 PF07402.6 gi|21227010|ref|NP_632932.1| - 0.019 14.2 0.5 0.024 13.9 0.3 1.1 1 0 0 1 1 1 0 Human herpesvirus U26 protein HAUS-augmin3 PF14932.1 gi|21227010|ref|NP_632932.1| - 0.02 14.0 0.2 0.026 13.6 0.1 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 DUF1664 PF07889.7 gi|21227010|ref|NP_632932.1| - 0.036 13.8 0.4 0.046 13.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF603 PF04645.7 gi|21227010|ref|NP_632932.1| - 0.039 13.9 1.1 0.045 13.6 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF603 ABC2_membrane PF01061.19 gi|21227010|ref|NP_632932.1| - 0.04 13.0 0.5 0.052 12.7 0.4 1.1 1 0 0 1 1 1 0 ABC-2 type transporter Baculo_PEP_C PF04513.7 gi|21227010|ref|NP_632932.1| - 0.08 12.7 0.5 0.097 12.5 0.3 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus YvrJ PF12841.2 gi|21227010|ref|NP_632932.1| - 0.18 11.1 1.8 5.1 6.4 0.1 2.6 2 0 0 2 2 2 0 YvrJ protein family DUF1119 PF06550.6 gi|21227011|ref|NP_632933.1| - 5.1e-133 442.5 26.1 6.1e-133 442.2 18.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1119) ORMDL PF04061.9 gi|21227011|ref|NP_632933.1| - 2.1 7.9 8.5 0.78 9.3 1.9 2.4 2 0 0 2 2 2 0 ORMDL family Hydrolase PF00702.21 gi|21227012|ref|NP_632934.1| - 7.4e-16 59.2 0.4 3.3e-15 57.0 0.3 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|21227012|ref|NP_632934.1| - 1.2e-06 28.7 0.1 1.5e-06 28.4 0.1 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21227012|ref|NP_632934.1| - 2.1e-05 24.1 0.1 6.2e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_3 PF08282.7 gi|21227012|ref|NP_632934.1| - 0.00027 20.6 0.5 0.18 11.3 0.0 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase ABC_tran PF00005.22 gi|21227013|ref|NP_632935.1| - 4.4e-51 172.7 0.0 2.7e-25 89.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|21227013|ref|NP_632935.1| - 5.5e-07 29.8 1.1 0.26 11.2 0.1 4.1 3 1 0 3 3 3 1 AAA domain DUF258 PF03193.11 gi|21227013|ref|NP_632935.1| - 2e-05 23.8 0.2 0.14 11.3 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|21227013|ref|NP_632935.1| - 2.5e-05 23.6 0.9 0.53 9.4 0.0 3.3 2 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21227013|ref|NP_632935.1| - 2.9e-05 23.3 0.7 0.22 10.5 0.0 3.4 4 0 0 4 4 4 2 AAA ATPase domain AAA_17 PF13207.1 gi|21227013|ref|NP_632935.1| - 0.00028 21.6 1.2 0.11 13.3 0.2 2.9 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|21227013|ref|NP_632935.1| - 0.00057 19.3 1.3 0.84 9.2 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|21227013|ref|NP_632935.1| - 0.00061 19.6 0.0 1 9.3 0.0 3.3 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|21227013|ref|NP_632935.1| - 0.001 18.7 0.6 1.4 8.5 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_18 PF13238.1 gi|21227013|ref|NP_632935.1| - 0.0011 19.2 2.4 0.17 12.2 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.1 gi|21227013|ref|NP_632935.1| - 0.0014 18.6 1.0 1.2 9.0 0.0 3.4 4 0 0 4 4 4 1 AAA ATPase domain AAA_23 PF13476.1 gi|21227013|ref|NP_632935.1| - 0.0018 18.6 0.7 1.1 9.5 0.2 2.6 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21227013|ref|NP_632935.1| - 0.003 17.6 0.1 2.5 8.2 0.0 2.8 2 0 0 2 2 2 1 AAA domain PRK PF00485.13 gi|21227013|ref|NP_632935.1| - 0.0037 16.8 0.1 2.2 7.7 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.1 gi|21227013|ref|NP_632935.1| - 0.0046 16.8 0.1 1.1 9.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|21227013|ref|NP_632935.1| - 0.0058 15.5 2.1 0.81 8.4 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_30 PF13604.1 gi|21227013|ref|NP_632935.1| - 0.021 14.3 0.1 9.6 5.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|21227013|ref|NP_632935.1| - 0.023 13.8 0.1 0.47 9.5 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_10 PF12846.2 gi|21227013|ref|NP_632935.1| - 0.031 13.6 0.3 7.8 5.8 0.1 2.5 2 0 0 2 2 2 0 AAA-like domain MobB PF03205.9 gi|21227013|ref|NP_632935.1| - 0.04 13.6 1.7 2.6 7.7 0.1 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|21227013|ref|NP_632935.1| - 0.043 12.9 2.1 0.89 8.6 0.1 2.7 3 0 0 3 3 3 0 KaiC Rad50_zn_hook PF04423.9 gi|21227013|ref|NP_632935.1| - 0.046 13.2 0.6 0.68 9.4 0.0 2.7 2 0 0 2 2 2 0 Rad50 zinc hook motif AAA_19 PF13245.1 gi|21227013|ref|NP_632935.1| - 0.11 12.2 0.3 29 4.5 0.1 3.0 2 0 0 2 2 2 0 Part of AAA domain PduV-EutP PF10662.4 gi|21227013|ref|NP_632935.1| - 0.11 11.9 0.6 5.7 6.4 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.12 gi|21227013|ref|NP_632935.1| - 0.12 11.7 0.8 41 3.5 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein zf-C3HC4_3 PF13920.1 gi|21227013|ref|NP_632935.1| - 0.19 11.4 0.5 0.31 10.7 0.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-FPG_IleRS PF06827.9 gi|21227013|ref|NP_632935.1| - 0.25 11.0 0.0 0.25 11.0 0.0 1.9 2 0 0 2 2 1 0 Zinc finger found in FPG and IleRS AAA_13 PF13166.1 gi|21227013|ref|NP_632935.1| - 0.28 9.5 0.7 3.7 5.8 0.0 2.5 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.12 gi|21227013|ref|NP_632935.1| - 0.47 10.2 8.6 0.71 9.6 0.2 2.8 3 0 0 3 3 3 0 Domain of unknown function DUF87 NACHT PF05729.7 gi|21227013|ref|NP_632935.1| - 1.8 8.1 5.7 1 8.9 0.3 2.6 2 0 0 2 2 2 0 NACHT domain Cut12 PF11500.3 gi|21227014|ref|NP_632936.1| - 0.0059 16.3 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 Spindle pole body formation-associated protein DUF4120 PF13496.1 gi|21227014|ref|NP_632936.1| - 0.011 15.7 0.0 0.035 14.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Fer2_4 PF13510.1 gi|21227014|ref|NP_632936.1| - 0.14 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF2102 PF09875.4 gi|21227015|ref|NP_632937.1| - 9.2e-45 150.4 0.0 1.2e-44 150.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) BCL_N PF04714.8 gi|21227015|ref|NP_632937.1| - 0.29 10.7 2.4 12 5.5 0.0 3.1 3 1 0 3 3 3 0 BCL7, N-terminal conserver region DUF2112 PF09885.4 gi|21227016|ref|NP_632938.1| - 9.6e-67 223.0 0.1 1.1e-66 222.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) Oxidored_nitro PF00148.14 gi|21227016|ref|NP_632938.1| - 0.034 12.7 0.0 0.036 12.7 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase BcrAD_BadFG PF01869.15 gi|21227017|ref|NP_632939.1| - 3e-56 190.7 4.0 3.9e-56 190.3 2.8 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.8 gi|21227017|ref|NP_632939.1| - 0.0025 17.3 1.9 0.003 17.0 0.4 1.8 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase N-terminal region FtsA PF14450.1 gi|21227017|ref|NP_632939.1| - 0.023 14.5 3.3 0.78 9.5 0.1 2.6 2 0 0 2 2 2 0 Cell division protein FtsA MutL PF13941.1 gi|21227017|ref|NP_632939.1| - 0.033 12.5 2.2 0.44 8.8 0.3 2.4 2 0 0 2 2 2 0 MutL protein DUF2113 PF09886.4 gi|21227018|ref|NP_632940.1| - 6.2e-68 227.6 0.5 7e-68 227.4 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) MCR_C PF04609.7 gi|21227019|ref|NP_632941.1| - 5.9e-115 382.6 0.4 6.7e-115 382.4 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C CMD PF02627.15 gi|21227020|ref|NP_632942.1| - 8.5e-16 57.5 0.0 1.5e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DUF4599 PF15371.1 gi|21227020|ref|NP_632942.1| - 0.012 15.7 0.1 0.021 14.8 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4599) Peptidase_M10 PF00413.19 gi|21227021|ref|NP_632943.1| - 4.1e-14 52.5 0.0 9.7e-14 51.3 0.0 1.5 1 1 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.4 gi|21227021|ref|NP_632943.1| - 0.0015 17.4 0.1 0.0022 16.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase M66 Reprolysin_2 PF13574.1 gi|21227021|ref|NP_632943.1| - 0.0023 18.0 0.0 0.0027 17.8 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.3 gi|21227021|ref|NP_632943.1| - 0.0061 15.0 0.0 0.0081 14.6 0.0 1.1 1 0 0 1 1 1 1 Putative peptidase family Peptidase_M57 PF12388.3 gi|21227021|ref|NP_632943.1| - 0.021 14.1 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Reprolysin_3 PF13582.1 gi|21227021|ref|NP_632943.1| - 0.026 15.0 0.0 0.033 14.6 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Astacin PF01400.19 gi|21227021|ref|NP_632943.1| - 0.076 12.4 0.1 0.23 10.8 0.0 1.7 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) Peptidase_M54 PF07998.6 gi|21227021|ref|NP_632943.1| - 0.09 12.5 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M54 Reprolysin_5 PF13688.1 gi|21227021|ref|NP_632943.1| - 0.16 11.8 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 RCR PF12273.3 gi|21227021|ref|NP_632943.1| - 0.25 11.9 1.3 1.8 9.1 0.0 2.2 2 0 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red NUDIX PF00293.23 gi|21227022|ref|NP_632944.1| - 3.5e-22 78.5 0.0 4.4e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.1 gi|21227022|ref|NP_632944.1| - 9.7e-05 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain AFOR_C PF01314.13 gi|21227023|ref|NP_632945.1| - 6.7e-106 354.1 0.0 1.1e-105 353.5 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|21227023|ref|NP_632945.1| - 1.9e-62 210.1 2.8 2.9e-62 209.5 2.0 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain eIF-5a PF01287.15 gi|21227024|ref|NP_632946.1| - 8.9e-13 47.9 0.4 8.9e-13 47.9 0.3 1.5 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|21227024|ref|NP_632946.1| - 0.00046 19.9 0.0 0.0008 19.2 0.0 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain PLDc PF00614.17 gi|21227024|ref|NP_632946.1| - 0.16 11.8 0.2 0.48 10.3 0.0 1.9 2 1 0 2 2 2 0 Phospholipase D Active site motif Arginase PF00491.16 gi|21227025|ref|NP_632947.1| - 1.5e-78 263.9 0.0 1.7e-78 263.7 0.0 1.0 1 0 0 1 1 1 1 Arginase family IPPT PF01715.12 gi|21227025|ref|NP_632947.1| - 0.13 11.2 0.0 0.3 10.0 0.0 1.5 2 0 0 2 2 2 0 IPP transferase SpoA PF01052.15 gi|21227027|ref|NP_632949.1| - 0.13 11.8 0.0 0.23 11.0 0.0 1.4 1 1 0 1 1 1 0 Surface presentation of antigens (SPOA) DUF4277 PF14104.1 gi|21227028|ref|NP_632950.1| - 7.2e-41 138.9 0.0 1.6e-40 137.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21227028|ref|NP_632950.1| - 4.3e-10 39.4 0.1 5.2e-09 35.9 0.0 2.2 1 1 0 1 1 1 1 Transposase DDE domain HTH_3 PF01381.17 gi|21227029|ref|NP_632951.1| - 4.4e-15 55.2 0.0 4.9e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|21227029|ref|NP_632951.1| - 1.6e-13 50.4 0.1 1.7e-13 50.3 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|21227029|ref|NP_632951.1| - 7.7e-10 38.8 0.0 9.6e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21227029|ref|NP_632951.1| - 8.5e-07 29.0 0.0 9.4e-07 28.9 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.11 gi|21227029|ref|NP_632951.1| - 0.00037 19.7 0.0 0.00053 19.2 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_25 PF13413.1 gi|21227029|ref|NP_632951.1| - 0.0031 17.1 0.0 0.0038 16.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|21227029|ref|NP_632951.1| - 0.0031 17.1 0.0 0.0049 16.4 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.1 gi|21227029|ref|NP_632951.1| - 0.0089 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_37 PF13744.1 gi|21227029|ref|NP_632951.1| - 0.037 13.8 0.0 0.043 13.6 0.0 1.3 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_CodY PF08222.6 gi|21227029|ref|NP_632951.1| - 0.11 11.8 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_7 PF02796.10 gi|21227029|ref|NP_632951.1| - 0.15 11.9 0.1 0.71 9.7 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.2 gi|21227029|ref|NP_632951.1| - 0.15 11.7 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 MarR family DUF2178 PF09946.4 gi|21227030|ref|NP_632952.1| - 1.1e-41 141.0 3.3 1.2e-41 140.8 2.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) IncA PF04156.9 gi|21227030|ref|NP_632952.1| - 0.0012 18.4 3.9 0.0012 18.4 2.7 1.7 1 1 0 1 1 1 1 IncA protein UbiA PF01040.13 gi|21227030|ref|NP_632952.1| - 0.0075 15.5 3.5 0.0093 15.2 2.4 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF4131 PF13567.1 gi|21227030|ref|NP_632952.1| - 0.086 12.2 0.5 0.17 11.2 0.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_4 PF12730.2 gi|21227030|ref|NP_632952.1| - 0.13 11.3 12.0 0.87 8.6 3.9 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein TcpE PF12648.2 gi|21227030|ref|NP_632952.1| - 0.33 11.1 1.6 1.2 9.3 0.3 1.9 2 0 0 2 2 2 0 TcpE family Bax1-I PF01027.15 gi|21227030|ref|NP_632952.1| - 0.57 9.7 11.9 0.062 12.8 3.0 2.0 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF4191 PF13829.1 gi|21227030|ref|NP_632952.1| - 5.4 6.0 7.2 2.1 7.3 2.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) RseC_MucC PF04246.7 gi|21227030|ref|NP_632952.1| - 6.1 6.4 6.4 0.64 9.5 0.5 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Na_H_Exchanger PF00999.16 gi|21227031|ref|NP_632953.1| - 2.7e-80 269.7 53.2 4.3e-80 269.0 36.9 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|21227031|ref|NP_632953.1| - 1.3e-19 70.3 0.3 2.3e-19 69.5 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|21227031|ref|NP_632953.1| - 1.5e-12 46.9 0.0 4.2e-12 45.4 0.0 1.9 1 0 0 1 1 1 1 TrkA-C domain P-II PF00543.17 gi|21227032|ref|NP_632954.1| - 0.00016 22.1 0.5 0.0002 21.7 0.3 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1538 PF07556.6 gi|21227033|ref|NP_632955.1| - 6.3e-71 237.8 21.6 7.5e-71 237.5 15.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) DUF4153 PF13687.1 gi|21227033|ref|NP_632955.1| - 0.41 10.1 14.1 0.017 14.6 3.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4153) DUF1538 PF07556.6 gi|21227034|ref|NP_632956.1| - 1.9e-68 229.7 26.3 2.1e-68 229.5 18.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) Na_H_Exchanger PF00999.16 gi|21227035|ref|NP_632957.1| - 5e-67 226.0 62.3 6.9e-67 225.6 43.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|21227035|ref|NP_632957.1| - 3.6e-24 85.0 1.9 6.8e-24 84.1 0.7 1.9 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.16 gi|21227035|ref|NP_632957.1| - 3.3e-15 55.4 0.7 9e-15 54.0 0.1 2.1 2 0 0 2 2 2 1 TrkA-C domain AlaDh_PNT_C PF01262.16 gi|21227035|ref|NP_632957.1| - 0.016 14.7 0.1 0.036 13.6 0.1 1.5 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.13 gi|21227035|ref|NP_632957.1| - 0.018 14.7 0.4 0.029 14.0 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LAM_C PF12544.3 gi|21227036|ref|NP_632958.1| - 5e-37 126.7 0.0 9.1e-37 125.9 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.16 gi|21227036|ref|NP_632958.1| - 3.5e-07 30.5 0.6 2.9e-06 27.5 0.1 2.3 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21227036|ref|NP_632958.1| - 5.3e-05 23.3 1.5 0.00037 20.6 0.0 2.6 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227036|ref|NP_632958.1| - 0.00017 21.5 1.3 0.042 13.8 0.0 3.2 3 1 1 4 4 4 2 4Fe-4S single cluster domain FixO PF02433.10 gi|21227036|ref|NP_632958.1| - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Acetyltransf_10 PF13673.1 gi|21227037|ref|NP_632959.1| - 6.6e-05 23.0 0.0 0.00011 22.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21227037|ref|NP_632959.1| - 6.7e-05 22.8 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21227037|ref|NP_632959.1| - 7.8e-05 22.6 0.0 0.00017 21.5 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21227037|ref|NP_632959.1| - 0.00019 21.5 0.0 0.00041 20.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227037|ref|NP_632959.1| - 0.0063 16.3 0.0 0.027 14.3 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain ADH_zinc_N_2 PF13602.1 gi|21227037|ref|NP_632959.1| - 0.18 12.7 0.1 5.6 7.8 0.0 2.6 2 1 0 3 3 3 0 Zinc-binding dehydrogenase Proteasom_Rpn13 PF04683.8 gi|21227038|ref|NP_632960.1| - 0.019 15.0 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 Proteasome complex subunit Rpn13 ubiquitin receptor T2SF PF00482.18 gi|21227039|ref|NP_632961.1| - 3.5e-34 117.3 6.7 2.5e-17 62.9 0.5 3.1 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F DUF912 PF06024.7 gi|21227039|ref|NP_632961.1| - 0.018 15.1 2.1 0.058 13.4 0.1 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) Pex24p PF06398.6 gi|21227039|ref|NP_632961.1| - 0.16 10.7 1.2 2 7.1 0.1 2.3 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin TRAP-gamma PF07074.7 gi|21227039|ref|NP_632961.1| - 0.42 10.1 3.9 1.5 8.3 0.1 3.0 3 0 0 3 3 3 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF1129 PF06570.6 gi|21227039|ref|NP_632961.1| - 0.61 9.3 5.6 2.5 7.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) Baculo_11_kDa PF06143.6 gi|21227039|ref|NP_632961.1| - 5.9 6.3 7.9 9.1 5.7 0.3 3.5 3 0 0 3 3 3 0 Baculovirus 11 kDa family T2SE PF00437.15 gi|21227040|ref|NP_632962.1| - 4.5e-44 150.3 0.0 7.5e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|21227040|ref|NP_632962.1| - 0.025 14.0 0.0 0.054 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|21227040|ref|NP_632962.1| - 0.054 13.8 0.9 0.3 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.1 gi|21227040|ref|NP_632962.1| - 1.1 9.0 0.0 1.1 9.0 0.0 3.0 3 1 0 3 3 3 0 AAA domain KaiC PF06745.8 gi|21227041|ref|NP_632963.1| - 4e-46 156.9 0.0 4.6e-46 156.7 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|21227041|ref|NP_632963.1| - 9.9e-08 31.6 0.2 2.5e-07 30.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain RecA PF00154.16 gi|21227041|ref|NP_632963.1| - 4.9e-06 25.8 0.0 8.1e-06 25.1 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein GvpD PF07088.6 gi|21227041|ref|NP_632963.1| - 8.1e-06 24.4 0.2 0.00018 19.9 0.1 2.1 1 1 0 1 1 1 1 GvpD gas vesicle protein NTPase_1 PF03266.10 gi|21227041|ref|NP_632963.1| - 1.6e-05 24.6 0.2 4.4e-05 23.2 0.1 1.6 1 1 0 1 1 1 1 NTPase IstB_IS21 PF01695.12 gi|21227041|ref|NP_632963.1| - 6e-05 22.5 0.3 0.00028 20.3 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21227041|ref|NP_632963.1| - 7.2e-05 22.4 0.1 0.00013 21.6 0.1 1.3 1 0 0 1 1 1 1 Part of AAA domain AAA_16 PF13191.1 gi|21227041|ref|NP_632963.1| - 0.0011 19.0 0.1 0.0015 18.5 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain T2SE PF00437.15 gi|21227041|ref|NP_632963.1| - 0.0046 15.9 0.0 0.0071 15.2 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein MORN_2 PF07661.8 gi|21227041|ref|NP_632963.1| - 0.0057 16.5 0.1 0.014 15.3 0.1 1.7 1 0 0 1 1 1 1 MORN repeat variant AAA_22 PF13401.1 gi|21227041|ref|NP_632963.1| - 0.0066 16.5 0.4 0.021 14.9 0.3 1.9 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|21227041|ref|NP_632963.1| - 0.0072 16.0 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DEAD PF00270.24 gi|21227041|ref|NP_632963.1| - 0.0088 15.5 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase PAXNEB PF05625.6 gi|21227041|ref|NP_632963.1| - 0.012 14.4 0.1 0.016 14.0 0.1 1.2 1 0 0 1 1 1 0 PAXNEB protein Sigma54_activat PF00158.21 gi|21227041|ref|NP_632963.1| - 0.013 15.0 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain UPF0079 PF02367.12 gi|21227041|ref|NP_632963.1| - 0.016 14.8 0.1 0.029 13.9 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 ResIII PF04851.10 gi|21227041|ref|NP_632963.1| - 0.019 14.7 0.0 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit TIP49 PF06068.8 gi|21227041|ref|NP_632963.1| - 0.02 13.6 0.0 0.03 13.0 0.0 1.3 1 0 0 1 1 1 0 TIP49 C-terminus DUF2075 PF09848.4 gi|21227041|ref|NP_632963.1| - 0.022 13.7 0.0 0.023 13.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.1 gi|21227041|ref|NP_632963.1| - 0.022 14.3 0.4 0.14 11.7 0.3 2.0 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|21227041|ref|NP_632963.1| - 0.025 14.0 0.5 0.061 12.7 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_29 PF13555.1 gi|21227041|ref|NP_632963.1| - 0.029 13.8 0.2 0.071 12.6 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.1 gi|21227041|ref|NP_632963.1| - 0.031 14.1 0.2 0.3 11.0 0.1 2.3 1 1 0 1 1 1 0 AAA domain DnaB_C PF03796.10 gi|21227041|ref|NP_632963.1| - 0.057 12.2 0.0 0.077 11.8 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Rad51 PF08423.6 gi|21227041|ref|NP_632963.1| - 0.078 11.8 0.1 0.1 11.4 0.0 1.3 1 0 0 1 1 1 0 Rad51 TrwB_AAD_bind PF10412.4 gi|21227041|ref|NP_632963.1| - 0.098 11.2 0.1 0.16 10.5 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CbiA PF01656.18 gi|21227041|ref|NP_632963.1| - 0.26 10.6 1.2 0.48 9.7 0.8 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.1 gi|21227041|ref|NP_632963.1| - 0.44 10.8 3.3 0.97 9.7 2.4 1.6 1 1 0 1 1 1 0 AAA domain DUF4445 PF14574.1 gi|21227042|ref|NP_632964.1| - 1.7e-101 339.4 4.7 2.9e-101 338.7 3.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4_7 PF12838.2 gi|21227042|ref|NP_632964.1| - 1e-06 28.9 12.2 2.3e-06 27.8 8.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227042|ref|NP_632964.1| - 4.8e-05 23.0 11.5 0.00011 21.9 7.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227042|ref|NP_632964.1| - 9.2e-05 22.6 12.1 0.00021 21.4 8.4 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227042|ref|NP_632964.1| - 0.00021 21.0 11.3 0.00043 20.0 7.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227042|ref|NP_632964.1| - 0.00053 20.6 12.7 0.0021 18.7 2.5 2.6 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|21227042|ref|NP_632964.1| - 0.0007 19.0 3.2 0.0007 19.0 2.2 2.6 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21227042|ref|NP_632964.1| - 0.0015 18.3 5.9 0.003 17.4 4.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227042|ref|NP_632964.1| - 0.0065 16.3 14.3 0.05 13.4 2.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21227042|ref|NP_632964.1| - 0.023 15.0 13.3 0.79 10.2 0.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227042|ref|NP_632964.1| - 0.026 14.9 7.5 0.079 13.3 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227042|ref|NP_632964.1| - 0.098 12.6 12.1 0.44 10.5 1.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DUF326 PF03860.11 gi|21227042|ref|NP_632964.1| - 0.56 10.1 10.3 4.9 7.1 2.1 2.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Fer4_3 PF12798.2 gi|21227042|ref|NP_632964.1| - 1.5 9.5 17.8 1.7 9.4 3.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21227042|ref|NP_632964.1| - 4.9 7.2 13.0 2.6 8.1 2.5 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227042|ref|NP_632964.1| - 5.4 7.4 13.3 0.49 10.7 1.6 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Lyase_1 PF00206.15 gi|21227043|ref|NP_632965.1| - 3e-54 184.3 1.0 4.1e-54 183.8 0.7 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|21227043|ref|NP_632965.1| - 3.1e-26 91.2 0.2 9.5e-26 89.6 0.0 2.0 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus ASL_C2 PF14698.1 gi|21227043|ref|NP_632965.1| - 0.06 13.4 0.1 5.2 7.2 0.0 3.1 3 0 0 3 3 3 0 Argininosuccinate lyase C-terminal Ribosomal_L40e PF01020.12 gi|298205308|ref|YP_003717786.1| - 3.9e-06 26.3 6.8 4.5e-06 26.1 4.7 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 gi|298205308|ref|YP_003717786.1| - 0.0011 18.7 1.1 0.0012 18.6 0.8 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-DHHC PF01529.15 gi|298205308|ref|YP_003717786.1| - 0.003 16.9 1.3 0.0032 16.8 0.9 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase zf-RanBP PF00641.13 gi|298205308|ref|YP_003717786.1| - 0.0044 16.0 4.4 0.0061 15.6 3.1 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zinc_ribbon_2 PF13240.1 gi|298205308|ref|YP_003717786.1| - 0.0089 15.4 0.4 0.013 14.9 0.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain HypA PF01155.14 gi|298205308|ref|YP_003717786.1| - 0.048 13.3 2.1 0.054 13.1 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family FYVE PF01363.16 gi|298205308|ref|YP_003717786.1| - 0.048 13.5 2.5 0.054 13.3 1.8 1.2 1 0 0 1 1 1 0 FYVE zinc finger DNA_RNApol_7kD PF03604.8 gi|298205308|ref|YP_003717786.1| - 0.074 12.5 6.0 0.15 11.5 4.1 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|298205308|ref|YP_003717786.1| - 0.089 12.0 1.5 0.14 11.4 1.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|298205308|ref|YP_003717786.1| - 0.12 12.1 2.5 1.2 8.9 2.1 1.9 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|298205308|ref|YP_003717786.1| - 0.52 10.3 4.5 1.6 8.7 0.4 2.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF2082 PF09855.4 gi|298205308|ref|YP_003717786.1| - 0.64 9.8 3.6 8.2 6.3 0.1 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-tcix PF14952.1 gi|298205308|ref|YP_003717786.1| - 0.82 9.0 9.2 1.2 8.4 6.4 1.4 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding Ribosomal_L37e PF01907.14 gi|298205308|ref|YP_003717786.1| - 0.86 9.4 7.1 0.83 9.4 3.0 2.0 1 1 1 2 2 2 0 Ribosomal protein L37e PcrB PF01884.12 gi|21227045|ref|NP_632967.1| - 5.7e-79 264.6 2.1 6.7e-79 264.3 1.5 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|21227045|ref|NP_632967.1| - 4e-06 26.2 0.3 7.4e-06 25.3 0.2 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein Trp_syntA PF00290.15 gi|21227045|ref|NP_632967.1| - 0.0048 15.4 0.8 0.024 13.2 0.2 1.9 2 0 0 2 2 2 1 Tryptophan synthase alpha chain NanE PF04131.9 gi|21227045|ref|NP_632967.1| - 0.033 13.1 1.2 0.16 10.9 0.2 2.0 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribul_P_3_epim PF00834.14 gi|21227045|ref|NP_632967.1| - 0.041 13.0 0.2 0.077 12.0 0.2 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family CsgG PF03783.9 gi|21227045|ref|NP_632967.1| - 0.041 12.9 0.3 0.065 12.3 0.2 1.3 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG ThiG PF05690.9 gi|21227045|ref|NP_632967.1| - 0.32 10.0 4.4 2 7.4 1.1 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG ABC_tran PF00005.22 gi|21227046|ref|NP_632968.1| - 4.6e-52 175.9 0.0 1.6e-26 93.2 0.0 2.5 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|21227046|ref|NP_632968.1| - 4.1e-15 56.5 5.1 1.9e-06 28.0 0.4 4.1 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|21227046|ref|NP_632968.1| - 2.4e-08 33.4 1.3 0.012 14.6 0.0 4.1 4 0 0 4 4 4 2 AAA ATPase domain AAA_22 PF13401.1 gi|21227046|ref|NP_632968.1| - 3e-08 33.8 2.5 0.031 14.4 0.0 3.7 2 1 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|21227046|ref|NP_632968.1| - 3.6e-08 33.9 0.3 0.0026 18.1 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|21227046|ref|NP_632968.1| - 4.4e-08 32.5 0.3 0.005 16.3 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21227046|ref|NP_632968.1| - 4.7e-08 32.3 0.1 0.0066 15.6 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|21227046|ref|NP_632968.1| - 8.3e-07 29.8 5.2 0.048 14.4 0.4 3.9 4 1 0 4 4 3 2 AAA domain AAA_16 PF13191.1 gi|21227046|ref|NP_632968.1| - 9.1e-07 29.0 0.4 0.1 12.6 0.2 3.3 3 1 0 3 3 3 2 AAA ATPase domain SbcCD_C PF13558.1 gi|21227046|ref|NP_632968.1| - 1.1e-05 25.2 0.2 0.064 13.1 0.0 3.4 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.1 gi|21227046|ref|NP_632968.1| - 1.5e-05 24.4 0.1 1.3 8.3 0.0 4.0 4 0 0 4 4 4 2 AAA domain AAA_18 PF13238.1 gi|21227046|ref|NP_632968.1| - 2.5e-05 24.5 0.1 0.15 12.3 0.0 3.2 3 0 0 3 3 2 2 AAA domain AAA_30 PF13604.1 gi|21227046|ref|NP_632968.1| - 3.4e-05 23.5 0.1 0.19 11.2 0.0 2.7 3 0 0 3 3 2 2 AAA domain NB-ARC PF00931.17 gi|21227046|ref|NP_632968.1| - 8.5e-05 21.5 0.4 0.1 11.4 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain MobB PF03205.9 gi|21227046|ref|NP_632968.1| - 9.9e-05 22.0 0.3 0.55 9.9 0.0 2.9 3 0 0 3 3 2 2 Molybdopterin guanine dinucleotide synthesis protein B SMC_N PF02463.14 gi|21227046|ref|NP_632968.1| - 0.00013 21.3 0.0 4.1 6.5 0.0 4.0 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain PRK PF00485.13 gi|21227046|ref|NP_632968.1| - 0.00018 21.1 0.2 0.47 9.9 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_10 PF12846.2 gi|21227046|ref|NP_632968.1| - 0.00028 20.4 3.3 0.97 8.8 0.1 3.6 3 2 1 4 4 4 2 AAA-like domain AAA_19 PF13245.1 gi|21227046|ref|NP_632968.1| - 0.0012 18.5 0.7 2.5 7.9 0.0 3.3 3 0 0 3 3 3 1 Part of AAA domain AAA_33 PF13671.1 gi|21227046|ref|NP_632968.1| - 0.0026 17.6 0.0 0.52 10.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA PF00004.24 gi|21227046|ref|NP_632968.1| - 0.0028 17.8 1.0 3.3 7.9 0.0 3.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|21227046|ref|NP_632968.1| - 0.003 17.4 1.1 10 6.0 0.0 3.7 4 0 0 4 4 3 0 AAA domain UPF0079 PF02367.12 gi|21227046|ref|NP_632968.1| - 0.0045 16.6 0.8 0.92 9.1 0.0 2.8 3 0 0 3 3 2 1 Uncharacterised P-loop hydrolase UPF0079 MMR_HSR1 PF01926.18 gi|21227046|ref|NP_632968.1| - 0.0058 16.5 0.8 1.2 9.0 0.3 2.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_28 PF13521.1 gi|21227046|ref|NP_632968.1| - 0.0071 16.3 0.4 1.3 8.9 0.0 3.1 3 1 0 3 3 3 1 AAA domain ArgK PF03308.11 gi|21227046|ref|NP_632968.1| - 0.01 14.5 0.3 0.061 12.0 0.0 2.0 2 0 0 2 2 2 0 ArgK protein PduV-EutP PF10662.4 gi|21227046|ref|NP_632968.1| - 0.012 15.1 0.1 1.2 8.5 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Arch_ATPase PF01637.13 gi|21227046|ref|NP_632968.1| - 0.012 15.3 1.6 4.5 6.9 0.0 3.1 3 0 0 3 3 3 0 Archaeal ATPase APS_kinase PF01583.15 gi|21227046|ref|NP_632968.1| - 0.012 15.2 0.1 3.1 7.4 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase Rad17 PF03215.10 gi|21227046|ref|NP_632968.1| - 0.022 13.4 0.0 1.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Rad17 cell cycle checkpoint protein Mg_chelatase PF01078.16 gi|21227046|ref|NP_632968.1| - 0.022 13.9 0.1 0.71 8.9 0.0 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.15 gi|21227046|ref|NP_632968.1| - 0.034 12.8 0.1 1.6 7.3 0.0 2.3 2 0 0 2 2 2 0 G-protein alpha subunit NACHT PF05729.7 gi|21227046|ref|NP_632968.1| - 0.035 13.7 3.2 2.2 7.8 0.1 3.1 3 0 0 3 3 3 0 NACHT domain DUF3987 PF13148.1 gi|21227046|ref|NP_632968.1| - 0.036 12.6 0.1 4.3 5.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) cobW PF02492.14 gi|21227046|ref|NP_632968.1| - 0.042 13.2 1.0 3.3 7.1 0.0 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain T2SE PF00437.15 gi|21227046|ref|NP_632968.1| - 0.046 12.6 0.1 1.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein RNA_helicase PF00910.17 gi|21227046|ref|NP_632968.1| - 0.05 13.7 0.4 6.1 7.0 0.0 2.5 2 0 0 2 2 2 0 RNA helicase Miro PF08477.8 gi|21227046|ref|NP_632968.1| - 0.068 13.6 0.7 7 7.1 0.0 3.2 3 0 0 3 3 3 0 Miro-like protein NTPase_1 PF03266.10 gi|21227046|ref|NP_632968.1| - 0.078 12.6 4.0 0.7 9.5 0.1 2.7 3 0 0 3 3 2 0 NTPase IstB_IS21 PF01695.12 gi|21227046|ref|NP_632968.1| - 0.082 12.3 0.1 6.8 6.0 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF87 PF01935.12 gi|21227046|ref|NP_632968.1| - 0.084 12.6 2.8 3.5 7.3 0.1 2.9 2 1 0 2 2 2 0 Domain of unknown function DUF87 AAA_5 PF07728.9 gi|21227046|ref|NP_632968.1| - 0.1 12.3 0.9 4.5 6.9 0.1 2.9 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.7 gi|21227046|ref|NP_632968.1| - 0.17 10.9 0.6 9.9 5.1 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin FMN_red PF03358.10 gi|21227047|ref|NP_632969.1| - 1.2e-14 54.1 0.0 1.8e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21227047|ref|NP_632969.1| - 1.6e-07 31.0 0.0 2e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavin_Reduct PF01613.13 gi|21227048|ref|NP_632970.1| - 2.1e-22 79.6 0.0 2.7e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain MacB_PCD PF12704.2 gi|21227049|ref|NP_632971.1| - 4.5e-36 124.6 5.0 4.5e-36 124.6 3.5 1.9 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21227049|ref|NP_632971.1| - 7.2e-20 70.9 13.7 7.2e-20 70.9 9.5 2.1 2 0 0 2 2 2 1 FtsX-like permease family TMEM141 PF15110.1 gi|21227049|ref|NP_632971.1| - 0.13 12.5 0.1 0.31 11.3 0.1 1.6 1 0 0 1 1 1 0 TMEM141 protein family DUF1053 PF06327.9 gi|21227049|ref|NP_632971.1| - 0.14 12.5 1.4 1.8 8.9 0.3 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) YjgP_YjgQ PF03739.9 gi|21227049|ref|NP_632971.1| - 0.96 8.1 7.9 0.73 8.5 2.8 2.2 2 0 0 2 2 2 0 Predicted permease YjgP/YjgQ family HATPase_c PF02518.21 gi|21227050|ref|NP_632972.1| - 9.1e-35 118.7 0.2 2.5e-34 117.3 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21227050|ref|NP_632972.1| - 2.7e-18 65.7 0.0 1.7e-17 63.1 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain MEDS PF14417.1 gi|21227050|ref|NP_632972.1| - 1.5e-11 43.7 0.0 2.5e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c_3 PF13589.1 gi|21227050|ref|NP_632972.1| - 7.4e-05 22.4 0.1 0.00014 21.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|21227050|ref|NP_632972.1| - 0.0071 16.1 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NPCBM_assoc PF10633.4 gi|21227051|ref|NP_632973.1| - 3.8e-08 33.2 0.0 0.15 12.1 0.0 3.9 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|21227051|ref|NP_632973.1| - 7.5e-08 32.3 1.7 3.7e-05 23.7 0.0 3.2 3 2 1 4 4 4 2 CARDB DUF2393 PF09624.5 gi|21227051|ref|NP_632973.1| - 0.00048 19.6 0.2 0.0025 17.3 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2393) DUF11 PF01345.13 gi|21227051|ref|NP_632973.1| - 0.045 13.8 6.5 0.32 11.0 0.2 3.1 3 1 0 3 3 3 0 Domain of unknown function DUF11 DUF4366 PF14283.1 gi|21227051|ref|NP_632973.1| - 0.082 12.3 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) ABC_tran PF00005.22 gi|21227052|ref|NP_632974.1| - 3.2e-35 121.4 0.1 1.3e-34 119.3 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21227052|ref|NP_632974.1| - 6.1e-12 46.0 0.0 8.3e-05 22.6 0.0 2.4 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21227052|ref|NP_632974.1| - 2.1e-06 27.1 0.3 2.8e-05 23.4 0.0 2.5 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21227052|ref|NP_632974.1| - 0.00016 21.1 0.8 0.00098 18.6 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|21227052|ref|NP_632974.1| - 0.00062 19.2 0.1 0.0016 17.9 0.0 1.7 2 0 0 2 2 2 1 AAA-like domain MMR_HSR1 PF01926.18 gi|21227052|ref|NP_632974.1| - 0.0022 17.9 0.0 0.0059 16.5 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF258 PF03193.11 gi|21227052|ref|NP_632974.1| - 0.0035 16.5 0.0 0.0064 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|21227052|ref|NP_632974.1| - 0.0061 17.3 0.0 0.012 16.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21227052|ref|NP_632974.1| - 0.0079 16.4 0.0 0.3 11.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|21227052|ref|NP_632974.1| - 0.011 15.7 0.1 0.015 15.3 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|21227052|ref|NP_632974.1| - 0.017 15.2 0.1 0.053 13.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|21227052|ref|NP_632974.1| - 0.022 14.1 0.0 0.047 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|21227052|ref|NP_632974.1| - 0.12 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_23 PF13476.1 gi|21227052|ref|NP_632974.1| - 0.12 12.6 0.1 0.12 12.6 0.1 1.8 2 0 0 2 2 1 0 AAA domain RNA_helicase PF00910.17 gi|21227052|ref|NP_632974.1| - 0.14 12.3 0.4 0.66 10.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase MacB_PCD PF12704.2 gi|21227053|ref|NP_632975.1| - 2.6e-37 128.6 3.4 2.6e-37 128.6 2.4 2.0 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21227053|ref|NP_632975.1| - 4.8e-21 74.7 9.6 4.8e-21 74.7 6.7 2.1 2 0 0 2 2 2 1 FtsX-like permease family CARDB PF07705.6 gi|21227054|ref|NP_632976.1| - 1e-09 38.3 3.8 4.5e-06 26.6 0.1 3.1 3 1 0 3 3 3 2 CARDB NPCBM_assoc PF10633.4 gi|21227054|ref|NP_632976.1| - 2.6e-07 30.6 0.0 0.12 12.4 0.0 3.9 3 0 0 3 3 3 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|21227054|ref|NP_632976.1| - 4.9e-06 26.4 4.0 0.01 15.8 0.3 3.1 2 1 0 2 2 2 2 Domain of unknown function DUF11 DUF2393 PF09624.5 gi|21227054|ref|NP_632976.1| - 0.00012 21.6 0.3 0.004 16.6 0.0 2.7 2 1 0 2 2 2 1 Protein of unknown function (DUF2393) Pilin PF00114.14 gi|21227054|ref|NP_632976.1| - 0.28 11.9 1.6 0.63 10.7 0.2 2.2 2 0 0 2 2 2 0 Pilin (bacterial filament) Cadherin-like PF12733.2 gi|21227054|ref|NP_632976.1| - 4.1 7.7 11.5 2.8e+02 1.8 0.6 4.4 1 1 2 3 3 3 0 Cadherin-like beta sandwich domain ABC_tran PF00005.22 gi|21227055|ref|NP_632977.1| - 3.2e-35 121.4 0.0 4.1e-35 121.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227055|ref|NP_632977.1| - 1.1e-13 51.8 0.1 2.8e-11 43.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21227055|ref|NP_632977.1| - 2.1e-05 23.8 0.1 0.0062 15.7 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|21227055|ref|NP_632977.1| - 7.6e-05 22.2 0.1 0.00012 21.6 0.1 1.5 1 1 0 1 1 1 1 AAA-like domain AAA_29 PF13555.1 gi|21227055|ref|NP_632977.1| - 9.4e-05 21.8 0.0 0.0002 20.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21227055|ref|NP_632977.1| - 0.00012 22.1 0.1 0.0016 18.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21227055|ref|NP_632977.1| - 0.00098 18.3 0.1 0.0015 17.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|21227055|ref|NP_632977.1| - 0.0018 18.3 0.1 0.0021 18.0 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|21227055|ref|NP_632977.1| - 0.0019 18.9 0.0 0.0036 18.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|21227055|ref|NP_632977.1| - 0.0029 17.0 0.0 0.0055 16.1 0.0 1.5 2 0 0 2 2 1 1 AAA domain AAA_23 PF13476.1 gi|21227055|ref|NP_632977.1| - 0.015 15.6 0.1 0.026 14.8 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|21227055|ref|NP_632977.1| - 0.016 15.5 0.7 0.12 12.6 0.5 2.2 1 1 0 1 1 1 0 AAA domain MobB PF03205.9 gi|21227055|ref|NP_632977.1| - 0.027 14.1 0.1 0.064 12.9 0.0 1.6 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_15 PF13175.1 gi|21227055|ref|NP_632977.1| - 0.027 13.5 0.0 1.9 7.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1 PF01926.18 gi|21227055|ref|NP_632977.1| - 0.029 14.3 0.0 0.06 13.3 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Arch_ATPase PF01637.13 gi|21227055|ref|NP_632977.1| - 0.031 13.9 0.1 0.42 10.2 0.0 2.1 2 0 0 2 2 2 0 Archaeal ATPase AAA_33 PF13671.1 gi|21227055|ref|NP_632977.1| - 0.042 13.7 0.0 0.094 12.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|21227055|ref|NP_632977.1| - 0.044 13.2 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family ABC_ATPase PF09818.4 gi|21227055|ref|NP_632977.1| - 0.065 11.8 0.1 2.5 6.5 0.0 2.6 3 0 0 3 3 3 0 Predicted ATPase of the ABC class AAA_19 PF13245.1 gi|21227055|ref|NP_632977.1| - 0.067 12.9 0.0 0.32 10.7 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain DUF87 PF01935.12 gi|21227055|ref|NP_632977.1| - 0.074 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_30 PF13604.1 gi|21227055|ref|NP_632977.1| - 0.11 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|21227055|ref|NP_632977.1| - 0.13 11.0 0.0 0.21 10.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain G-alpha PF00503.15 gi|21227055|ref|NP_632977.1| - 0.17 10.5 0.0 0.19 10.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit ABC2_membrane PF01061.19 gi|21227057|ref|NP_632979.1| - 2.5e-26 92.1 23.7 2.5e-26 92.1 16.5 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21227057|ref|NP_632979.1| - 7e-11 41.7 32.6 7e-11 41.7 22.6 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21227057|ref|NP_632979.1| - 0.067 12.3 35.8 0.22 10.6 24.7 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.22 gi|21227058|ref|NP_632980.1| - 5.9e-35 120.5 0.1 1.3e-34 119.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21227058|ref|NP_632980.1| - 1.2e-14 55.0 0.1 1e-08 35.4 0.0 2.4 1 1 1 2 2 2 2 AAA domain DUF4162 PF13732.1 gi|21227058|ref|NP_632980.1| - 1.6e-11 44.5 0.6 4.5e-11 43.1 0.2 2.0 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|21227058|ref|NP_632980.1| - 1.8e-05 24.0 0.3 0.044 12.8 0.7 2.4 2 0 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|21227058|ref|NP_632980.1| - 3.1e-05 23.2 0.1 6.7e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|21227058|ref|NP_632980.1| - 0.00099 18.5 0.1 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|21227058|ref|NP_632980.1| - 0.0027 16.9 0.5 0.018 14.2 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|21227058|ref|NP_632980.1| - 0.0076 16.5 5.7 0.029 14.7 3.9 2.1 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21227058|ref|NP_632980.1| - 0.012 15.9 1.6 2.1 8.6 0.1 2.6 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|21227058|ref|NP_632980.1| - 0.012 15.7 1.0 0.053 13.6 0.3 2.3 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.1 gi|21227058|ref|NP_632980.1| - 0.016 15.1 0.0 0.045 13.7 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain ACT_4 PF13291.1 gi|21227058|ref|NP_632980.1| - 0.041 14.2 0.5 3 8.2 0.0 2.7 2 0 0 2 2 2 0 ACT domain MMR_HSR1 PF01926.18 gi|21227058|ref|NP_632980.1| - 0.06 13.3 2.3 0.17 11.8 1.5 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_10 PF12846.2 gi|21227058|ref|NP_632980.1| - 0.072 12.5 1.1 2.3 7.6 0.1 2.3 1 1 0 2 2 2 0 AAA-like domain Ammonium_transp PF00909.16 gi|21227059|ref|NP_632981.1| - 7.7e-123 409.8 37.3 9.2e-123 409.6 25.8 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family P-II PF00543.17 gi|21227060|ref|NP_632982.1| - 4.1e-40 136.3 2.4 4.6e-40 136.1 1.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PBP5_C PF07943.8 gi|21227060|ref|NP_632982.1| - 0.011 15.6 0.4 0.017 15.0 0.3 1.2 1 0 0 1 1 1 0 Penicillin-binding protein 5, C-terminal domain HSP20 PF00011.16 gi|21227062|ref|NP_632984.1| - 1e-06 28.5 0.5 6.9e-05 22.6 0.3 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21227062|ref|NP_632984.1| - 0.022 15.3 0.2 0.037 14.5 0.1 1.4 1 1 0 1 1 1 0 CS domain Dehydratase_MU PF02288.10 gi|21227062|ref|NP_632984.1| - 0.12 12.1 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Dehydratase medium subunit HSP20 PF00011.16 gi|21227063|ref|NP_632985.1| - 2.8e-05 23.9 0.3 0.001 18.8 0.2 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21227063|ref|NP_632985.1| - 0.0017 18.8 0.0 0.0021 18.5 0.0 1.2 1 0 0 1 1 1 1 CS domain RIP PF00161.14 gi|21227063|ref|NP_632985.1| - 0.0027 16.9 0.0 0.003 16.7 0.0 1.0 1 0 0 1 1 1 1 Ribosome inactivating protein DUF1059 PF06348.6 gi|21227064|ref|NP_632986.1| - 0.00017 21.3 2.5 0.00025 20.8 1.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) PhosphMutase PF10143.4 gi|21227064|ref|NP_632986.1| - 0.044 13.4 0.1 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DUF832 PF05734.6 gi|21227064|ref|NP_632986.1| - 0.088 12.0 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) TspO_MBR PF03073.10 gi|21227065|ref|NP_632987.1| - 1.5e-55 186.7 21.2 1.8e-55 186.5 14.7 1.0 1 0 0 1 1 1 1 TspO/MBR family Voltage_CLC PF00654.15 gi|21227065|ref|NP_632987.1| - 0.65 8.9 7.2 0.79 8.6 5.0 1.2 1 0 0 1 1 1 0 Voltage gated chloride channel Gln-synt_C PF00120.19 gi|21227066|ref|NP_632988.1| - 1.6e-102 342.0 0.0 2e-102 341.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|21227066|ref|NP_632988.1| - 2.9e-27 94.0 0.0 6e-27 93.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain GATase_2 PF00310.16 gi|21227068|ref|NP_632990.1| - 8.1e-23 80.6 0.0 8.1e-22 77.4 0.0 1.9 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|21227068|ref|NP_632990.1| - 3.9e-17 62.4 0.0 5.5e-16 58.7 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|21227068|ref|NP_632990.1| - 3.7e-09 36.3 0.0 6.4e-08 32.3 0.0 2.2 1 1 0 1 1 1 1 Glutamine amidotransferase domain Glu_synthase PF01645.12 gi|21227069|ref|NP_632991.1| - 1.6e-134 448.4 0.0 2.2e-134 448.0 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|21227069|ref|NP_632991.1| - 1.3e-11 43.9 5.3 9.4e-09 34.5 1.6 3.2 3 0 0 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|21227069|ref|NP_632991.1| - 5.8e-10 38.5 0.1 3.3e-07 29.5 0.6 2.9 2 1 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain Glu_syn_central PF04898.9 gi|21227069|ref|NP_632991.1| - 2.2e-09 36.9 0.2 5.2e-05 22.6 0.0 2.3 2 0 0 2 2 2 2 Glutamate synthase central domain Fer4_10 PF13237.1 gi|21227069|ref|NP_632991.1| - 3.5e-09 36.3 22.3 5.6e-07 29.2 8.7 2.9 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227069|ref|NP_632991.1| - 5.6e-09 36.2 15.7 1.8e-06 28.2 7.9 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227069|ref|NP_632991.1| - 2.9e-08 33.8 17.5 1.1e-07 31.9 7.6 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21227069|ref|NP_632991.1| - 1.5e-07 30.6 21.8 1e-05 24.9 0.7 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain NMO PF03060.10 gi|21227069|ref|NP_632991.1| - 3.1e-07 29.8 8.7 2.8e-06 26.7 6.0 2.0 1 1 0 1 1 1 1 Nitronate monooxygenase Fer4_16 PF13484.1 gi|21227069|ref|NP_632991.1| - 1.1e-06 29.3 11.1 0.00057 20.5 0.3 3.4 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|21227069|ref|NP_632991.1| - 1.4e-06 27.8 21.3 1.3e-05 24.8 1.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227069|ref|NP_632991.1| - 2.6e-06 27.1 9.6 2.6e-06 27.1 6.7 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227069|ref|NP_632991.1| - 4.7e-06 26.8 7.8 0.13 12.6 0.1 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain DHO_dh PF01180.16 gi|21227069|ref|NP_632991.1| - 1.2e-05 24.4 0.6 0.00015 20.8 0.2 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_8 PF13183.1 gi|21227069|ref|NP_632991.1| - 1.3e-05 25.1 15.5 0.0031 17.4 8.9 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227069|ref|NP_632991.1| - 0.00011 21.9 22.5 0.0016 18.2 1.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain His_biosynth PF00977.16 gi|21227069|ref|NP_632991.1| - 0.00083 18.6 0.2 0.0017 17.7 0.2 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_18 PF13746.1 gi|21227069|ref|NP_632991.1| - 0.0034 17.7 15.8 0.085 13.2 1.2 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227069|ref|NP_632991.1| - 0.011 15.5 5.6 0.011 15.5 3.9 2.0 2 1 0 2 2 1 0 4Fe-4S dicluster domain PcrB PF01884.12 gi|21227069|ref|NP_632991.1| - 0.012 14.8 0.8 0.19 10.9 0.3 2.3 1 1 1 2 2 2 0 PcrB family Fer4_4 PF12800.2 gi|21227069|ref|NP_632991.1| - 0.045 14.1 2.5 0.045 14.1 1.7 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21227069|ref|NP_632991.1| - 0.56 10.8 17.3 2.5 8.7 7.7 3.3 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21227069|ref|NP_632991.1| - 9.1 6.7 21.2 0.33 11.3 1.2 3.2 3 0 0 3 3 2 0 4Fe-4S single cluster domain GXGXG PF01493.14 gi|21227070|ref|NP_632992.1| - 2.4e-34 118.1 11.7 2.8e-34 117.9 8.1 1.0 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.8 gi|21227071|ref|NP_632993.1| - 5e-39 133.3 0.0 5e-39 133.3 0.0 1.5 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|21227071|ref|NP_632993.1| - 9.4e-21 73.4 0.3 2.3e-20 72.2 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|21227071|ref|NP_632993.1| - 1e-07 31.2 2.8 1e-07 31.2 1.9 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227071|ref|NP_632993.1| - 1.3e-06 27.9 17.3 2.7e-06 26.9 1.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227071|ref|NP_632993.1| - 1.4e-06 27.9 8.3 3.3e-06 26.7 5.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227071|ref|NP_632993.1| - 2e-05 24.7 8.5 2e-05 24.7 5.9 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227071|ref|NP_632993.1| - 5.3e-05 23.5 11.0 5.3e-05 23.5 7.6 2.1 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227071|ref|NP_632993.1| - 7e-05 23.0 2.1 0.073 13.4 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227071|ref|NP_632993.1| - 9.2e-05 22.4 14.5 0.0054 16.9 1.1 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227071|ref|NP_632993.1| - 0.0002 21.0 2.8 0.0002 21.0 1.9 3.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227071|ref|NP_632993.1| - 0.0017 19.0 13.7 0.0084 16.8 7.4 2.8 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|21227071|ref|NP_632993.1| - 0.002 18.4 11.0 0.0028 18.0 0.3 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain DUF1344 PF07076.6 gi|21227071|ref|NP_632993.1| - 0.031 13.8 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1344) Fer4_8 PF13183.1 gi|21227071|ref|NP_632993.1| - 0.04 13.9 14.7 0.042 13.8 7.1 2.5 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227071|ref|NP_632993.1| - 0.14 12.0 3.2 0.26 11.2 1.7 1.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227071|ref|NP_632993.1| - 0.19 12.4 24.4 0.078 13.5 5.6 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21227071|ref|NP_632993.1| - 0.23 11.8 7.2 1.7 9.0 0.8 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|21227071|ref|NP_632993.1| - 0.95 9.3 14.8 0.12 12.2 1.8 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227071|ref|NP_632993.1| - 1.2 9.7 9.6 0.56 10.8 1.7 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain Zn_dep_PLPC PF00882.13 gi|21227073|ref|NP_632995.1| - 0.0092 15.6 1.6 0.014 15.0 1.1 1.3 1 0 0 1 1 1 1 Zinc dependent phospholipase C Apc3 PF12895.2 gi|21227073|ref|NP_632995.1| - 1.9 8.6 5.5 0.3 11.2 0.4 2.3 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 PPC PF04151.10 gi|21227074|ref|NP_632996.1| - 0.063 14.2 0.3 0.073 14.0 0.2 1.1 1 0 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain CMV_1a PF12467.3 gi|21227075|ref|NP_632997.1| - 0.0004 20.8 0.3 0.00062 20.1 0.2 1.2 1 0 0 1 1 1 1 Cucumber mosaic virus 1a protein family GST_N_2 PF13409.1 gi|21227075|ref|NP_632997.1| - 0.014 15.3 0.0 0.83 9.6 0.0 2.7 3 0 0 3 3 3 0 Glutathione S-transferase, N-terminal domain Unstab_antitox PF09720.5 gi|21227075|ref|NP_632997.1| - 0.018 14.7 0.3 0.073 12.7 0.0 2.2 3 0 0 3 3 3 0 Putative addiction module component DUF2201_N PF13203.1 gi|21227075|ref|NP_632997.1| - 0.16 11.0 0.1 0.27 10.3 0.1 1.3 1 0 0 1 1 1 0 Putative metallopeptidase domain Peptidase_M24 PF00557.19 gi|21227076|ref|NP_632998.1| - 5.3e-38 130.6 0.0 7.3e-38 130.2 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|21227076|ref|NP_632998.1| - 1.6e-12 48.0 0.0 2.5e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DUF2284 PF10050.4 gi|21227077|ref|NP_632999.1| - 2.5e-50 170.3 0.5 2.9e-50 170.1 0.4 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_S8 PF00082.17 gi|21227078|ref|NP_633000.1| - 9.4e-23 80.7 0.1 4e-18 65.5 0.0 2.2 2 0 0 2 2 2 2 Subtilase family F420_oxidored PF03807.12 gi|21227079|ref|NP_633001.1| - 6.6e-25 87.3 0.3 1.4e-24 86.3 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|21227079|ref|NP_633001.1| - 0.006 16.6 0.2 0.064 13.3 0.1 2.1 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Ldh_1_N PF00056.18 gi|21227079|ref|NP_633001.1| - 0.015 15.1 0.1 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|21227079|ref|NP_633001.1| - 0.019 13.9 0.0 0.027 13.4 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase DXP_reductoisom PF02670.11 gi|21227079|ref|NP_633001.1| - 0.1 13.1 2.4 5.4 7.5 0.0 2.6 2 1 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase KR PF08659.5 gi|21227079|ref|NP_633001.1| - 0.37 10.4 1.3 0.65 9.6 0.1 1.8 2 0 0 2 2 2 0 KR domain Fer4_8 PF13183.1 gi|21227081|ref|NP_633003.1| - 5.3e-14 51.9 7.7 8.9e-14 51.2 5.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227081|ref|NP_633003.1| - 2.8e-11 43.5 7.1 4.5e-11 42.9 4.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227081|ref|NP_633003.1| - 1.1e-08 35.1 5.9 5.9e-08 32.8 4.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227081|ref|NP_633003.1| - 1.3e-07 31.2 5.9 2.7e-07 30.2 4.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227081|ref|NP_633003.1| - 4.2e-06 27.0 10.2 7.4e-06 26.2 6.4 1.9 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227081|ref|NP_633003.1| - 1.2e-05 24.8 9.9 0.0025 17.6 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227081|ref|NP_633003.1| - 1.3e-05 24.9 4.9 2.3e-05 24.1 3.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21227081|ref|NP_633003.1| - 0.00021 20.7 12.1 0.02 14.5 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227081|ref|NP_633003.1| - 0.00052 20.3 12.0 0.0064 16.8 0.7 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227081|ref|NP_633003.1| - 0.0032 17.6 11.1 0.027 14.7 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21227081|ref|NP_633003.1| - 0.025 15.1 16.7 0.17 12.4 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227081|ref|NP_633003.1| - 0.14 12.9 13.3 2.8 8.7 2.4 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain PLAC8 PF04749.12 gi|21227081|ref|NP_633003.1| - 0.16 12.5 3.3 0.26 11.8 2.3 1.3 1 0 0 1 1 1 0 PLAC8 family Fer4_11 PF13247.1 gi|21227081|ref|NP_633003.1| - 0.27 11.1 3.6 0.77 9.6 2.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227081|ref|NP_633003.1| - 0.3 11.0 11.0 0.59 10.1 1.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DUF678 PF05077.7 gi|21227081|ref|NP_633003.1| - 0.82 9.7 5.7 1.5 8.8 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF678) CCG PF02754.11 gi|21227082|ref|NP_633004.1| - 4e-31 106.8 5.2 1.8e-18 66.2 0.9 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Prok-RING_4 PF14447.1 gi|21227082|ref|NP_633004.1| - 0.053 13.0 0.6 0.053 13.0 0.4 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 DUF1284 PF06935.6 gi|21227083|ref|NP_633005.1| - 3.5e-26 91.3 0.5 4.5e-26 91.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) DDE_Tnp_1_6 PF13751.1 gi|21227083|ref|NP_633005.1| - 0.22 11.5 2.9 3.6 7.6 0.1 2.2 2 0 0 2 2 2 0 Transposase DDE domain Rdx PF10262.4 gi|21227083|ref|NP_633005.1| - 1.1 9.2 3.8 0.72 9.9 1.2 1.7 2 1 1 3 3 3 0 Rdx family SlyX PF04102.7 gi|21227084|ref|NP_633006.1| - 0.0036 17.6 0.1 0.0052 17.1 0.1 1.2 1 0 0 1 1 1 1 SlyX DASH_Spc34 PF08657.5 gi|21227084|ref|NP_633006.1| - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 Tantalus PF15386.1 gi|21227084|ref|NP_633006.1| - 5.2 6.9 5.7 13 5.5 4.0 1.9 1 1 0 1 1 1 0 Drosophila Tantalus-like DUF1847 PF08901.6 gi|21227085|ref|NP_633007.1| - 2.9e-49 166.5 0.0 3.7e-49 166.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1847) HCV_NS1 PF01560.12 gi|21227085|ref|NP_633007.1| - 0.073 11.5 0.0 0.099 11.0 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 DUF169 PF02596.10 gi|21227086|ref|NP_633008.1| - 1.3e-66 224.1 0.0 1.5e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CbiA PF01656.18 gi|21227087|ref|NP_633009.1| - 6.3e-25 87.7 0.0 8.3e-25 87.3 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.22 gi|21227087|ref|NP_633009.1| - 1.1e-11 43.8 13.2 5.5e-07 28.9 1.5 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227087|ref|NP_633009.1| - 3e-08 33.8 8.8 0.0016 18.8 1.2 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227087|ref|NP_633009.1| - 1.4e-07 31.0 13.5 0.0013 18.5 1.5 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227087|ref|NP_633009.1| - 2.1e-07 30.5 8.7 2.1e-07 30.5 6.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227087|ref|NP_633009.1| - 6e-07 29.0 16.2 0.00055 19.6 0.7 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227087|ref|NP_633009.1| - 1.8e-05 25.3 7.9 0.033 14.9 0.8 3.0 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_NifH PF00142.13 gi|21227087|ref|NP_633009.1| - 0.0001 21.5 1.4 0.01 15.0 0.0 2.5 3 0 0 3 3 3 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_9 PF13187.1 gi|21227087|ref|NP_633009.1| - 0.00028 21.0 12.5 0.0012 19.0 8.8 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain ParA PF10609.4 gi|21227087|ref|NP_633009.1| - 0.0004 20.2 0.2 0.00096 18.9 0.2 1.7 1 1 0 1 1 1 1 ParA/MinD ATPase like Fer4_4 PF12800.2 gi|21227087|ref|NP_633009.1| - 0.00056 20.0 11.2 0.11 12.8 1.7 3.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227087|ref|NP_633009.1| - 0.00057 19.6 10.9 0.00057 19.6 7.6 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain FTHFS PF01268.14 gi|21227087|ref|NP_633009.1| - 0.00059 17.9 0.0 0.00087 17.4 0.0 1.1 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase AAA_19 PF13245.1 gi|21227087|ref|NP_633009.1| - 0.00067 19.3 0.5 0.65 9.7 0.1 2.5 2 0 0 2 2 2 2 Part of AAA domain Fer4_15 PF13459.1 gi|21227087|ref|NP_633009.1| - 0.0011 19.4 8.3 0.19 12.3 1.1 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|21227087|ref|NP_633009.1| - 0.0047 16.9 13.0 0.33 11.0 8.8 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain ArsA_ATPase PF02374.10 gi|21227087|ref|NP_633009.1| - 0.015 14.3 0.4 0.03 13.3 0.3 1.5 1 0 0 1 1 1 0 Anion-transporting ATPase AAA_25 PF13481.1 gi|21227087|ref|NP_633009.1| - 0.018 14.4 0.2 0.62 9.4 0.5 2.2 2 0 0 2 2 2 0 AAA domain Fer4_17 PF13534.1 gi|21227087|ref|NP_633009.1| - 0.019 15.2 11.7 0.34 11.2 1.0 2.6 1 1 2 3 3 3 0 4Fe-4S dicluster domain AAA_16 PF13191.1 gi|21227087|ref|NP_633009.1| - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 gi|21227087|ref|NP_633009.1| - 0.048 13.9 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.1 gi|21227087|ref|NP_633009.1| - 0.049 14.4 1.4 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.1 gi|21227087|ref|NP_633009.1| - 0.05 13.7 0.0 0.8 9.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|21227087|ref|NP_633009.1| - 0.087 12.4 0.1 0.2 11.2 0.0 1.7 2 0 0 2 2 1 0 NACHT domain AAA_13 PF13166.1 gi|21227087|ref|NP_633009.1| - 0.16 10.3 0.0 0.23 9.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain Herpeto_peptide PF14409.1 gi|21227087|ref|NP_633009.1| - 0.16 11.7 1.5 0.24 11.1 0.2 1.9 2 0 0 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon Fer4_18 PF13746.1 gi|21227087|ref|NP_633009.1| - 0.81 10.1 12.0 4.2 7.8 1.1 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21227087|ref|NP_633009.1| - 1 9.7 13.1 3.5 8.0 1.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21227087|ref|NP_633009.1| - 1.1 10.0 23.7 0.34 11.5 2.3 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain CbiA PF01656.18 gi|21227088|ref|NP_633010.1| - 2.4e-26 92.3 0.0 3.6e-26 91.7 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.22 gi|21227088|ref|NP_633010.1| - 8.4e-11 40.9 14.2 8.4e-06 25.1 1.4 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227088|ref|NP_633010.1| - 3.8e-08 32.8 14.0 3e-05 23.6 0.8 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227088|ref|NP_633010.1| - 2.4e-06 27.2 15.9 4.1e-05 23.3 6.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227088|ref|NP_633010.1| - 7.1e-06 25.7 5.0 1.8e-05 24.4 3.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227088|ref|NP_633010.1| - 1.3e-05 25.3 8.1 0.016 15.4 0.5 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227088|ref|NP_633010.1| - 4.2e-05 23.8 30.2 0.00064 20.0 7.9 2.6 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227088|ref|NP_633010.1| - 0.00042 20.9 9.3 0.0011 19.6 0.3 2.8 3 0 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_NifH PF00142.13 gi|21227088|ref|NP_633010.1| - 0.00069 18.8 0.0 0.2 10.8 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.1 gi|21227088|ref|NP_633010.1| - 0.00072 19.0 0.0 0.002 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.1 gi|21227088|ref|NP_633010.1| - 0.0016 18.0 0.0 0.043 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_2 PF12797.2 gi|21227088|ref|NP_633010.1| - 0.003 17.3 15.0 0.024 14.5 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain AAA_19 PF13245.1 gi|21227088|ref|NP_633010.1| - 0.0035 17.0 0.1 0.067 12.9 0.0 2.6 3 0 0 3 3 2 1 Part of AAA domain AAA_31 PF13614.1 gi|21227088|ref|NP_633010.1| - 0.0036 17.2 0.0 0.013 15.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|21227088|ref|NP_633010.1| - 0.0048 15.9 0.3 0.0093 15.0 0.2 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.6 gi|21227088|ref|NP_633010.1| - 0.0095 15.0 0.0 0.013 14.6 0.0 1.1 1 0 0 1 1 1 1 ATPase MipZ Fer4_8 PF13183.1 gi|21227088|ref|NP_633010.1| - 0.013 15.5 13.8 0.084 12.9 1.5 2.6 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227088|ref|NP_633010.1| - 0.02 15.2 11.3 8 6.9 1.8 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227088|ref|NP_633010.1| - 0.022 15.3 20.8 0.1 13.1 5.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain ParA PF10609.4 gi|21227088|ref|NP_633010.1| - 0.032 14.1 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 ParA/MinD ATPase like AAA_17 PF13207.1 gi|21227088|ref|NP_633010.1| - 0.067 14.0 0.0 0.13 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain PhoH PF02562.11 gi|21227088|ref|NP_633010.1| - 0.074 12.2 0.2 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 PhoH-like protein DUF2075 PF09848.4 gi|21227088|ref|NP_633010.1| - 0.092 11.6 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_18 PF13238.1 gi|21227088|ref|NP_633010.1| - 0.14 12.4 0.0 1 9.6 0.0 2.2 3 0 0 3 3 3 0 AAA domain Fer4_4 PF12800.2 gi|21227088|ref|NP_633010.1| - 0.58 10.6 17.6 0.6 10.5 2.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227088|ref|NP_633010.1| - 4.9 7.6 10.3 0.92 9.9 1.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Nitro_FeMo-Co PF02579.12 gi|21227089|ref|NP_633011.1| - 5.2e-20 71.3 0.0 7.1e-20 70.8 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor Nitro_FeMo-Co PF02579.12 gi|21227090|ref|NP_633012.1| - 7.3e-22 77.2 0.0 8.5e-22 77.0 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF134 PF02001.11 gi|21227091|ref|NP_633013.1| - 1.5e-26 92.3 0.1 1.8e-26 92.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_23 PF13384.1 gi|21227091|ref|NP_633013.1| - 0.0019 17.7 0.2 0.0037 16.8 0.1 1.5 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.7 gi|21227091|ref|NP_633013.1| - 0.0023 17.3 0.1 0.0036 16.7 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.6 gi|21227091|ref|NP_633013.1| - 0.0052 16.4 1.1 0.0068 16.1 0.2 1.5 2 0 0 2 2 2 1 ECF sigma factor HTH_31 PF13560.1 gi|21227091|ref|NP_633013.1| - 0.016 15.4 0.1 0.025 14.7 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|21227091|ref|NP_633013.1| - 0.14 11.8 0.2 0.66 9.6 0.0 2.0 1 1 1 2 2 2 0 HTH domain ParA PF10609.4 gi|21227092|ref|NP_633014.1| - 3e-32 110.3 0.1 5.7e-32 109.4 0.1 1.5 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|21227092|ref|NP_633014.1| - 1.1e-21 77.1 0.0 1.6e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|21227092|ref|NP_633014.1| - 2.7e-09 37.1 0.0 1.9e-07 31.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.10 gi|21227092|ref|NP_633014.1| - 2.1e-07 30.3 0.1 4.6e-07 29.1 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.6 gi|21227092|ref|NP_633014.1| - 1.5e-06 27.5 0.0 3e-06 26.4 0.0 1.6 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.13 gi|21227092|ref|NP_633014.1| - 2.5e-06 26.9 0.0 3.2e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.1 gi|21227092|ref|NP_633014.1| - 5.9e-06 25.8 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|21227092|ref|NP_633014.1| - 0.0015 17.3 0.2 0.0025 16.6 0.1 1.4 1 0 0 1 1 1 1 ArgK protein DUF258 PF03193.11 gi|21227092|ref|NP_633014.1| - 0.0059 15.8 0.1 0.012 14.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_19 PF13245.1 gi|21227092|ref|NP_633014.1| - 0.0068 16.1 2.5 0.064 13.0 0.2 2.6 2 1 0 2 2 2 1 Part of AAA domain YhjQ PF06564.7 gi|21227092|ref|NP_633014.1| - 0.0092 15.3 0.1 0.67 9.2 0.1 2.1 2 0 0 2 2 2 1 YhjQ protein SRP54 PF00448.17 gi|21227092|ref|NP_633014.1| - 0.012 15.0 0.2 0.022 14.2 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_10 PF12846.2 gi|21227092|ref|NP_633014.1| - 0.016 14.6 0.2 0.026 13.9 0.1 1.2 1 0 0 1 1 1 0 AAA-like domain VirC1 PF07015.6 gi|21227092|ref|NP_633014.1| - 0.025 13.6 0.1 0.043 12.8 0.0 1.2 1 0 0 1 1 1 0 VirC1 protein APS_kinase PF01583.15 gi|21227092|ref|NP_633014.1| - 0.026 14.1 0.1 0.047 13.3 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase zinc_ribbon_2 PF13240.1 gi|21227092|ref|NP_633014.1| - 0.035 13.5 1.5 0.044 13.2 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain AAA_26 PF13500.1 gi|21227092|ref|NP_633014.1| - 0.041 13.4 0.7 0.73 9.4 0.1 2.3 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|21227092|ref|NP_633014.1| - 0.043 13.5 0.1 0.085 12.5 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|21227092|ref|NP_633014.1| - 0.046 12.5 0.2 0.093 11.5 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain zf-ribbon_3 PF13248.1 gi|21227092|ref|NP_633014.1| - 0.24 10.6 1.5 0.34 10.1 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin PF00085.15 gi|21227093|ref|NP_633015.1| - 1.5e-14 53.4 0.0 2.1e-14 53.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.1 gi|21227093|ref|NP_633015.1| - 7.7e-05 22.6 0.0 0.00014 21.7 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.1 gi|21227093|ref|NP_633015.1| - 0.00041 20.5 0.0 0.00074 19.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|21227093|ref|NP_633015.1| - 0.00042 20.3 0.0 0.00078 19.5 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.5 gi|21227093|ref|NP_633015.1| - 0.002 17.7 0.0 0.0026 17.3 0.0 1.4 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.16 gi|21227093|ref|NP_633015.1| - 0.015 15.0 0.0 0.02 14.6 0.0 1.4 1 1 0 1 1 1 0 AhpC/TSA family DUF836 PF05768.9 gi|21227093|ref|NP_633015.1| - 0.021 15.0 0.0 0.036 14.3 0.0 1.6 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DIM1 PF02966.11 gi|21227093|ref|NP_633015.1| - 0.026 14.0 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_9 PF14595.1 gi|21227093|ref|NP_633015.1| - 0.027 14.0 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin TraF PF13728.1 gi|21227093|ref|NP_633015.1| - 0.044 13.2 0.0 0.11 11.9 0.0 1.7 2 0 0 2 2 2 0 F plasmid transfer operon protein Lipase_bact_N PF12262.3 gi|21227093|ref|NP_633015.1| - 0.066 12.4 0.1 0.1 11.8 0.1 1.3 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal DUF2847 PF11009.3 gi|21227093|ref|NP_633015.1| - 0.069 12.7 0.0 0.12 11.9 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) DsbD PF02683.10 gi|21227094|ref|NP_633016.1| - 4.2e-39 134.3 22.7 5e-39 134.0 15.7 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|21227094|ref|NP_633016.1| - 1.2e-14 54.5 22.7 1.6e-14 54.1 15.7 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF3899 PF13038.1 gi|21227094|ref|NP_633016.1| - 0.51 10.5 6.5 2.5 8.3 0.4 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) MerE PF05052.7 gi|21227094|ref|NP_633016.1| - 0.76 9.7 7.4 0.5 10.3 0.2 2.9 1 1 2 3 3 3 0 MerE protein CAAD PF14159.1 gi|21227094|ref|NP_633016.1| - 1.8 8.2 8.5 1.9 8.1 0.8 3.4 2 2 2 4 4 4 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF4097 PF13349.1 gi|21227095|ref|NP_633017.1| - 0.33 10.4 7.4 1.1 8.7 0.0 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4097) CbiC PF02570.10 gi|21227096|ref|NP_633018.1| - 1.4e-61 207.3 0.6 1.7e-61 207.1 0.4 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase Reductase_C PF14759.1 gi|21227096|ref|NP_633018.1| - 0.097 12.9 0.0 4.2 7.7 0.0 2.7 3 0 0 3 3 3 0 Reductase C-terminal TP_methylase PF00590.15 gi|21227097|ref|NP_633019.1| - 2e-34 119.1 0.3 2.3e-34 118.9 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DAGK_cat PF00781.19 gi|21227097|ref|NP_633019.1| - 0.031 13.7 0.1 0.9 8.9 0.1 2.2 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain CbiG_C PF01890.11 gi|21227098|ref|NP_633020.1| - 1.5e-32 112.3 0.0 1.7e-32 112.2 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus RNase_PH_C PF03725.10 gi|21227098|ref|NP_633020.1| - 0.12 12.3 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 Smr PF01713.16 gi|21227098|ref|NP_633020.1| - 0.13 12.4 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Smr domain Histone_HNS PF00816.16 gi|21227098|ref|NP_633020.1| - 0.15 12.5 0.1 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 H-NS histone family CbiG_N PF11760.3 gi|21227099|ref|NP_633021.1| - 1.3e-24 85.7 2.3 4.6e-24 83.9 0.0 2.1 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal TP_methylase PF00590.15 gi|21227100|ref|NP_633022.1| - 2.2e-42 145.1 0.2 2.5e-42 144.9 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|21227100|ref|NP_633022.1| - 0.018 15.2 0.1 0.052 13.7 0.1 1.8 1 1 0 1 1 1 0 Radical SAM superfamily TP_methylase PF00590.15 gi|21227101|ref|NP_633023.1| - 4.2e-34 118.1 0.0 1.9e-33 115.9 0.0 1.8 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_31 PF13847.1 gi|21227102|ref|NP_633024.1| - 6.3e-11 42.0 0.2 7.6e-11 41.8 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227102|ref|NP_633024.1| - 1.1e-10 42.1 0.2 1.7e-10 41.4 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21227102|ref|NP_633024.1| - 7.4e-10 38.4 0.1 1.2e-09 37.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.13 gi|21227102|ref|NP_633024.1| - 1.6e-07 31.0 0.1 2.7e-07 30.3 0.1 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|21227102|ref|NP_633024.1| - 1.6e-06 28.4 0.0 2.4e-06 27.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21227102|ref|NP_633024.1| - 7.3e-06 26.0 0.0 8.6e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|21227102|ref|NP_633024.1| - 1.4e-05 24.3 0.6 1.7e-05 24.1 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.14 gi|21227102|ref|NP_633024.1| - 2.3e-05 24.0 0.2 9.6e-05 22.0 0.0 1.8 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|21227102|ref|NP_633024.1| - 2.4e-05 23.4 0.0 3.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.13 gi|21227102|ref|NP_633024.1| - 3.3e-05 23.1 0.3 5.5e-05 22.4 0.2 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21227102|ref|NP_633024.1| - 4.2e-05 23.9 0.1 5.7e-05 23.5 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21227102|ref|NP_633024.1| - 7.3e-05 21.9 0.0 7.6e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.7 gi|21227102|ref|NP_633024.1| - 0.00012 22.5 0.0 0.00018 21.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.5 gi|21227102|ref|NP_633024.1| - 0.00065 19.2 0.0 0.00078 19.0 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Cons_hypoth95 PF03602.10 gi|21227102|ref|NP_633024.1| - 0.00082 18.8 0.2 0.0011 18.4 0.1 1.3 1 1 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.10 gi|21227102|ref|NP_633024.1| - 0.0016 17.6 0.2 0.0026 16.9 0.2 1.3 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G DOT1 PF08123.8 gi|21227102|ref|NP_633024.1| - 0.0027 17.0 0.0 0.0047 16.2 0.0 1.4 1 0 0 1 1 1 1 Histone methylation protein DOT1 DUF633 PF04816.7 gi|21227102|ref|NP_633024.1| - 0.0041 16.4 0.2 0.0084 15.4 0.1 1.4 1 1 1 2 2 2 1 Family of unknown function (DUF633) Methyltransf_23 PF13489.1 gi|21227102|ref|NP_633024.1| - 0.0062 16.2 0.0 0.0077 15.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|21227102|ref|NP_633024.1| - 0.013 15.0 0.3 0.098 12.2 0.0 1.9 1 1 1 2 2 2 0 Met-10+ like-protein Methyltransf_32 PF13679.1 gi|21227102|ref|NP_633024.1| - 0.11 12.1 0.0 0.22 11.2 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain Tetraspannin PF00335.15 gi|21227103|ref|NP_633025.1| - 0.17 11.1 1.8 0.27 10.4 1.2 1.3 1 0 0 1 1 1 0 Tetraspanin family HMGL-like PF00682.14 gi|21227104|ref|NP_633026.1| - 5.4e-33 114.6 0.0 8.1e-33 114.0 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Iso_dh PF00180.15 gi|21227105|ref|NP_633027.1| - 1.4e-83 280.6 0.0 1.8e-83 280.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Acetyltransf_CG PF14542.1 gi|21227105|ref|NP_633027.1| - 0.02 14.7 0.0 0.35 10.7 0.0 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase TatD_DNase PF01026.16 gi|21227106|ref|NP_633028.1| - 7.3e-26 90.9 0.0 8.9e-26 90.6 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase CBS PF00571.23 gi|21227106|ref|NP_633028.1| - 0.071 12.9 0.4 18 5.2 0.0 3.4 3 1 1 4 4 4 0 CBS domain HTH_3 PF01381.17 gi|21227107|ref|NP_633029.1| - 7.1e-10 38.5 1.1 1.1e-09 38.0 0.7 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|21227107|ref|NP_633029.1| - 9.5e-09 35.1 0.6 9.5e-09 35.1 0.4 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|21227107|ref|NP_633029.1| - 2.2e-08 34.1 0.0 3.3e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|21227107|ref|NP_633029.1| - 1e-05 25.0 0.9 1.6e-05 24.4 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Arc_trans_TRASH PF08394.5 gi|21227107|ref|NP_633029.1| - 0.037 14.1 0.4 0.09 12.9 0.3 1.7 1 0 0 1 1 1 0 Archaeal TRASH domain HTH_37 PF13744.1 gi|21227107|ref|NP_633029.1| - 0.076 12.8 0.5 0.15 11.8 0.2 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain AAA PF00004.24 gi|21227108|ref|NP_633030.1| - 3.9e-44 150.0 0.2 2e-43 147.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|21227108|ref|NP_633030.1| - 8.4e-09 35.2 0.9 2.7e-08 33.6 0.1 2.2 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|21227108|ref|NP_633030.1| - 7.4e-07 29.3 0.6 6.7e-06 26.2 0.1 2.6 2 1 0 2 2 2 1 AAA ATPase domain DUF815 PF05673.8 gi|21227108|ref|NP_633030.1| - 1.2e-06 27.6 0.0 2.5e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.9 gi|21227108|ref|NP_633030.1| - 9.6e-06 25.6 0.5 2.4e-05 24.3 0.0 1.9 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|21227108|ref|NP_633030.1| - 8.5e-05 22.6 2.7 0.0018 18.3 0.4 2.9 2 1 0 2 2 2 1 AAA domain Filament PF00038.16 gi|21227108|ref|NP_633030.1| - 0.0003 20.3 1.5 0.0003 20.3 1.1 1.8 2 0 0 2 2 1 1 Intermediate filament protein AAA_19 PF13245.1 gi|21227108|ref|NP_633030.1| - 0.00039 20.1 0.4 0.0013 18.4 0.3 1.9 1 1 0 1 1 1 1 Part of AAA domain RuvB_N PF05496.7 gi|21227108|ref|NP_633030.1| - 0.0004 19.5 0.0 0.00093 18.3 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_17 PF13207.1 gi|21227108|ref|NP_633030.1| - 0.00054 20.7 0.0 0.0018 19.0 0.0 1.9 2 0 0 2 2 1 1 AAA domain KaiC PF06745.8 gi|21227108|ref|NP_633030.1| - 0.0018 17.4 2.5 0.12 11.4 0.0 3.1 2 1 1 3 3 3 1 KaiC CCDC144C PF14915.1 gi|21227108|ref|NP_633030.1| - 0.0025 16.8 2.6 0.0045 15.9 1.8 1.3 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region AAA_28 PF13521.1 gi|21227108|ref|NP_633030.1| - 0.0033 17.4 0.0 0.0067 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|21227108|ref|NP_633030.1| - 0.0038 17.0 0.0 0.0094 15.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|21227108|ref|NP_633030.1| - 0.0039 17.0 0.0 0.012 15.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain Tropomyosin_1 PF12718.2 gi|21227108|ref|NP_633030.1| - 0.0041 16.9 3.1 0.0041 16.9 2.2 2.2 3 0 0 3 3 2 1 Tropomyosin like AAA_3 PF07726.6 gi|21227108|ref|NP_633030.1| - 0.0045 16.5 0.0 0.0094 15.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.1 gi|21227108|ref|NP_633030.1| - 0.0047 17.2 0.8 0.023 14.9 0.0 2.4 2 1 0 2 2 2 1 AAA domain Phage_GP20 PF06810.6 gi|21227108|ref|NP_633030.1| - 0.0055 16.1 1.4 0.062 12.7 0.0 2.3 2 0 0 2 2 2 1 Phage minor structural protein GP20 Tektin PF03148.9 gi|21227108|ref|NP_633030.1| - 0.0063 15.1 3.3 0.0069 14.9 0.7 2.1 2 0 0 2 2 2 1 Tektin family IstB_IS21 PF01695.12 gi|21227108|ref|NP_633030.1| - 0.01 15.2 0.3 0.032 13.6 0.0 1.9 2 0 0 2 2 1 0 IstB-like ATP binding protein ADIP PF11559.3 gi|21227108|ref|NP_633030.1| - 0.013 15.3 2.0 0.032 14.1 1.4 1.6 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Sigma54_activat PF00158.21 gi|21227108|ref|NP_633030.1| - 0.018 14.5 0.1 0.43 10.0 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain Zeta_toxin PF06414.7 gi|21227108|ref|NP_633030.1| - 0.022 13.8 1.1 0.036 13.1 0.0 1.9 2 1 0 2 2 2 0 Zeta toxin AAA_25 PF13481.1 gi|21227108|ref|NP_633030.1| - 0.024 14.0 3.3 0.44 9.9 0.1 2.9 2 1 1 3 3 3 0 AAA domain Sigma54_activ_2 PF14532.1 gi|21227108|ref|NP_633030.1| - 0.027 14.4 0.0 0.28 11.2 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain APG6 PF04111.7 gi|21227108|ref|NP_633030.1| - 0.034 13.2 0.7 0.075 12.0 0.5 1.5 1 0 0 1 1 1 0 Autophagy protein Apg6 Arch_ATPase PF01637.13 gi|21227108|ref|NP_633030.1| - 0.039 13.6 3.0 0.34 10.5 0.1 3.1 2 1 0 2 2 2 0 Archaeal ATPase bZIP_2 PF07716.10 gi|21227108|ref|NP_633030.1| - 0.047 13.5 0.4 0.047 13.5 0.3 3.1 2 1 1 3 3 2 0 Basic region leucine zipper Mg_chelatase PF01078.16 gi|21227108|ref|NP_633030.1| - 0.059 12.5 0.0 0.16 11.1 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.22 gi|21227108|ref|NP_633030.1| - 0.08 13.2 0.1 3.5 7.9 0.0 2.9 3 0 0 3 3 3 0 ABC transporter AAA_24 PF13479.1 gi|21227108|ref|NP_633030.1| - 0.1 12.1 0.0 0.21 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain IncA PF04156.9 gi|21227108|ref|NP_633030.1| - 0.11 12.0 4.7 0.15 11.6 1.5 2.1 2 0 0 2 2 2 0 IncA protein Syntaxin-6_N PF09177.6 gi|21227108|ref|NP_633030.1| - 0.13 12.6 2.6 9 6.7 0.0 2.8 2 0 0 2 2 2 0 Syntaxin 6, N-terminal V-SNARE PF05008.10 gi|21227108|ref|NP_633030.1| - 0.16 12.1 5.1 0.66 10.1 3.5 2.0 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus V_ATPase_I PF01496.14 gi|21227108|ref|NP_633030.1| - 0.16 9.7 1.1 0.21 9.4 0.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc7 PF08317.6 gi|21227108|ref|NP_633030.1| - 0.28 9.7 6.7 0.24 10.0 2.4 2.3 2 1 0 2 2 2 0 Spc7 kinetochore protein XhlA PF10779.4 gi|21227108|ref|NP_633030.1| - 0.81 9.6 3.0 0.97 9.3 0.5 2.3 2 0 0 2 2 2 0 Haemolysin XhlA CCDC155 PF14662.1 gi|21227108|ref|NP_633030.1| - 2.3 7.7 9.8 0.89 9.1 2.7 2.7 3 0 0 3 3 2 0 Coiled-coil region of CCDC155 DUF99 PF01949.11 gi|21227109|ref|NP_633031.1| - 1.6e-72 242.5 0.3 1.8e-72 242.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 CutC PF03932.9 gi|21227109|ref|NP_633031.1| - 0.031 13.5 0.2 0.68 9.1 0.0 2.1 2 0 0 2 2 2 0 CutC family ODC_AZ PF02100.12 gi|21227109|ref|NP_633031.1| - 0.12 11.8 0.0 0.31 10.5 0.0 1.6 1 1 1 2 2 2 0 Ornithine decarboxylase antizyme Tubulin PF00091.20 gi|21227110|ref|NP_633032.1| - 2.1e-35 122.5 4.6 2.2e-35 122.4 1.0 2.4 2 1 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|21227110|ref|NP_633032.1| - 2.4e-35 120.4 1.0 7.5e-35 118.8 0.7 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain SecE PF00584.15 gi|21227111|ref|NP_633033.1| - 0.03 13.8 0.1 0.036 13.6 0.1 1.2 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex Tox-WTIP PF15654.1 gi|21227111|ref|NP_633033.1| - 0.11 12.1 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif UCR_Fe-S_N PF10399.4 gi|21227111|ref|NP_633033.1| - 0.22 10.7 0.8 0.53 9.4 0.2 1.9 2 1 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Spt5-NGN PF03439.8 gi|21227112|ref|NP_633034.1| - 4.1e-25 87.3 0.1 6e-25 86.8 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|21227112|ref|NP_633034.1| - 1.9e-06 27.3 1.0 1.6e-05 24.4 0.2 2.3 2 0 0 2 2 2 1 KOW motif NusG PF02357.14 gi|21227112|ref|NP_633034.1| - 0.00075 19.6 0.0 0.0024 18.0 0.0 1.9 1 1 0 1 1 1 1 Transcription termination factor nusG Ribosomal_L11_N PF03946.9 gi|21227113|ref|NP_633035.1| - 5e-26 89.9 1.8 5e-26 89.9 1.3 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|21227113|ref|NP_633035.1| - 4.7e-23 81.1 0.6 4.7e-23 81.1 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain CTDII PF01556.13 gi|21227113|ref|NP_633035.1| - 0.03 14.2 0.4 0.054 13.3 0.3 1.4 1 0 0 1 1 1 0 DnaJ C terminal domain HGTP_anticodon PF03129.15 gi|21227113|ref|NP_633035.1| - 0.064 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Anticodon binding domain DUF1351 PF07083.6 gi|21227113|ref|NP_633035.1| - 0.091 12.3 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) Ribosomal_L1 PF00687.16 gi|21227114|ref|NP_633036.1| - 1.7e-46 158.3 0.3 1.9e-46 158.1 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.15 gi|21227115|ref|NP_633037.1| - 1.3e-22 79.5 0.3 3.1e-22 78.3 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.14 gi|21227115|ref|NP_633037.1| - 1.5e-09 38.1 26.9 1.5e-09 38.1 18.6 2.9 3 1 0 3 3 3 1 60s Acidic ribosomal protein Brevenin PF03032.10 gi|21227115|ref|NP_633037.1| - 3.3 7.6 7.0 7.4 6.4 4.8 1.5 1 0 0 1 1 1 0 Brevenin/esculentin/gaegurin/rugosin family Ribosomal_60s PF00428.14 gi|21227116|ref|NP_633038.1| - 1.5e-20 73.3 24.7 1.8e-20 73.1 17.1 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein CAP_N PF01213.14 gi|21227116|ref|NP_633038.1| - 0.35 10.1 1.4 0.43 9.8 1.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF1631 PF07793.6 gi|21227116|ref|NP_633038.1| - 0.45 8.5 3.6 0.5 8.4 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DEC-1_N PF04625.8 gi|21227116|ref|NP_633038.1| - 1 8.0 6.7 0.99 8.0 4.6 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Hc1 PF07432.8 gi|21227116|ref|NP_633038.1| - 1.1 9.4 6.2 1.3 9.2 4.3 1.1 1 0 0 1 1 1 0 Histone H1-like protein Hc1 DUF2360 PF10152.4 gi|21227116|ref|NP_633038.1| - 2.1 8.6 4.2 2.7 8.2 2.9 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein (DUF2360) PepSY_2 PF13670.1 gi|21227116|ref|NP_633038.1| - 4.8 7.1 16.5 1.8 8.5 0.1 2.2 1 1 0 2 2 2 0 Peptidase propeptide and YPEB domain Radical_SAM PF04055.16 gi|21227117|ref|NP_633039.1| - 1.8e-14 54.2 0.1 3.8e-14 53.1 0.0 1.6 1 1 0 1 1 1 1 Radical SAM superfamily UPF0150 PF03681.10 gi|21227117|ref|NP_633039.1| - 1.4e-06 27.8 0.1 3.9e-06 26.3 0.1 1.8 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3463 PF11946.3 gi|21227117|ref|NP_633039.1| - 3.1e-06 26.8 1.2 3.8e-06 26.5 0.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3463) SPASM PF13186.1 gi|21227117|ref|NP_633039.1| - 0.00014 22.0 0.6 0.00091 19.5 0.2 2.6 2 1 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|21227117|ref|NP_633039.1| - 0.0018 18.3 0.1 0.0056 16.8 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227117|ref|NP_633039.1| - 0.015 15.3 0.0 0.046 13.7 0.0 1.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain Acetyltransf_7 PF13508.1 gi|21227118|ref|NP_633040.1| - 8.7e-11 41.8 0.0 1.3e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21227118|ref|NP_633040.1| - 2.6e-08 33.7 0.0 3.3e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|21227118|ref|NP_633040.1| - 6.7e-05 22.9 0.0 8.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MOZ_SAS PF01853.13 gi|21227118|ref|NP_633040.1| - 0.0046 16.2 0.0 0.0062 15.7 0.0 1.3 1 0 0 1 1 1 1 MOZ/SAS family GNAT_acetyltr_2 PF13718.1 gi|21227118|ref|NP_633040.1| - 0.0077 15.5 0.0 0.016 14.5 0.0 1.6 1 1 0 1 1 1 1 GNAT acetyltransferase 2 FR47 PF08445.5 gi|21227118|ref|NP_633040.1| - 0.0086 15.8 0.0 0.036 13.8 0.0 1.9 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|21227118|ref|NP_633040.1| - 0.016 15.1 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.1 gi|21227118|ref|NP_633040.1| - 0.027 14.3 0.0 0.077 12.8 0.0 1.8 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF2540 PF10802.3 gi|21227118|ref|NP_633040.1| - 0.086 12.5 0.1 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2540) DUF498 PF04430.9 gi|21227118|ref|NP_633040.1| - 0.09 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) Uso1_p115_C PF04871.8 gi|21227118|ref|NP_633040.1| - 0.14 12.0 0.2 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region SAM_adeno_trans PF01887.11 gi|21227119|ref|NP_633041.1| - 2.9e-90 301.8 0.1 3.3e-90 301.6 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase DUF1616 PF07760.6 gi|21227120|ref|NP_633042.1| - 9e-31 107.0 0.0 1e-30 106.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Fer4 PF00037.22 gi|21227121|ref|NP_633043.1| - 0.03 13.9 1.9 0.03 13.9 1.3 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227121|ref|NP_633043.1| - 0.075 13.7 5.0 0.26 12.0 3.5 1.9 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|21227121|ref|NP_633043.1| - 0.61 10.5 6.4 1.3 9.4 4.5 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227121|ref|NP_633043.1| - 0.7 10.1 5.6 1.2 9.4 3.3 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain DNA_binding_1 PF01035.15 gi|21227122|ref|NP_633044.1| - 6.8e-31 105.8 0.0 9.6e-31 105.3 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.10 gi|21227122|ref|NP_633044.1| - 7.6e-08 32.8 0.0 1.3e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LolA PF03548.10 gi|21227124|ref|NP_633046.1| - 0.00032 20.3 0.0 0.0027 17.3 0.0 2.0 1 1 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA MucB_RseB PF03888.9 gi|21227124|ref|NP_633046.1| - 0.00058 18.9 0.0 0.00085 18.4 0.0 1.3 1 0 0 1 1 1 1 MucB/RseB family Sec62 PF03839.11 gi|21227124|ref|NP_633046.1| - 0.013 14.9 0.1 0.017 14.5 0.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF2092 PF09865.4 gi|21227124|ref|NP_633046.1| - 0.029 13.4 0.0 3 6.8 0.0 2.1 2 0 0 2 2 2 0 Predicted periplasmic protein (DUF2092) DUF1329 PF07044.6 gi|21227124|ref|NP_633046.1| - 0.13 11.1 1.0 0.4 9.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1329) DUF4367 PF14285.1 gi|21227126|ref|NP_633048.1| - 2.3e-13 49.8 4.2 2.3e-13 49.8 2.9 2.5 2 1 0 2 2 2 1 Domain of unknown function (DUF4367) DUF1571 PF07608.6 gi|21227126|ref|NP_633048.1| - 0.00016 20.8 0.0 0.00033 19.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) DUF1329 PF07044.6 gi|21227126|ref|NP_633048.1| - 0.021 13.7 0.0 0.038 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) ThiC PF01964.13 gi|161485678|ref|NP_633049.2| - 1.3e-181 603.7 0.2 1.5e-181 603.5 0.1 1.0 1 0 0 1 1 1 1 ThiC family Glycos_transf_2 PF00535.21 gi|21227128|ref|NP_633050.1| - 1.2e-16 60.9 0.0 1.7e-16 60.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227128|ref|NP_633050.1| - 4.3e-06 26.6 0.0 6.1e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227128|ref|NP_633050.1| - 0.0083 16.4 0.0 0.014 15.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 CBS PF00571.23 gi|21227128|ref|NP_633050.1| - 0.026 14.2 0.0 0.062 13.0 0.0 1.6 1 0 0 1 1 1 0 CBS domain DUF1600 PF07667.6 gi|21227128|ref|NP_633050.1| - 0.25 11.4 3.8 0.46 10.6 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) DUF2422 PF10337.4 gi|21227128|ref|NP_633050.1| - 0.57 8.9 4.9 0.77 8.4 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2422) TBP PF00352.16 gi|21227129|ref|NP_633051.1| - 8.4e-64 210.9 0.1 3.4e-31 106.4 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|21227129|ref|NP_633051.1| - 1.1e-05 25.4 0.0 0.18 11.9 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|21227129|ref|NP_633051.1| - 0.0026 17.1 0.0 0.72 9.3 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF3252) TBP PF00352.16 gi|21227130|ref|NP_633052.1| - 3.6e-65 215.3 0.2 6e-32 108.8 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|21227130|ref|NP_633052.1| - 6e-06 26.2 0.0 0.13 12.3 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|21227130|ref|NP_633052.1| - 0.0025 17.1 0.0 0.71 9.3 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3252) DUF387 PF04079.11 gi|21227131|ref|NP_633053.1| - 7.9e-40 135.8 0.0 2.2e-39 134.3 0.0 1.7 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) HTH_15 PF12324.3 gi|21227131|ref|NP_633053.1| - 0.001 18.6 0.0 0.015 14.9 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain of alkylmercury lyase HTH_20 PF12840.2 gi|21227131|ref|NP_633053.1| - 0.043 13.6 0.0 3 7.6 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3150 PF11348.3 gi|21227131|ref|NP_633053.1| - 0.044 12.8 0.1 0.083 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) TrmB PF01978.14 gi|21227131|ref|NP_633053.1| - 0.056 13.1 0.0 2 8.1 0.0 2.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB ScpA_ScpB PF02616.9 gi|21227132|ref|NP_633054.1| - 1.4e-30 106.6 0.0 2.3e-30 105.9 0.0 1.3 1 0 0 1 1 1 1 ScpA/B protein CbbQ_C PF08406.5 gi|21227132|ref|NP_633054.1| - 0.03 14.3 0.3 5.6 7.0 0.0 2.4 2 0 0 2 2 2 0 CbbQ/NirQ/NorQ C-terminal SMC_N PF02463.14 gi|21227133|ref|NP_633055.1| - 1e-70 237.4 0.0 1.8e-70 236.5 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.8 gi|21227133|ref|NP_633055.1| - 8e-34 116.1 0.1 7.7e-33 113.0 0.0 2.7 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.1 gi|21227133|ref|NP_633055.1| - 1.4e-13 51.6 21.1 1.4e-13 51.6 14.6 6.7 2 2 1 3 3 3 1 AAA domain AAA_21 PF13304.1 gi|21227133|ref|NP_633055.1| - 6.3e-07 29.6 3.0 3.2e-05 24.0 0.2 4.9 4 2 0 4 4 4 2 AAA domain AAA_29 PF13555.1 gi|21227133|ref|NP_633055.1| - 6.8e-07 28.7 0.0 1.5e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain BLOC1_2 PF10046.4 gi|21227133|ref|NP_633055.1| - 0.027 14.6 0.1 0.027 14.6 0.1 9.5 5 3 3 10 10 10 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF869 PF05911.6 gi|21227133|ref|NP_633055.1| - 0.34 9.0 82.3 0.0069 14.6 9.0 3.8 2 2 1 3 3 3 0 Plant protein of unknown function (DUF869) Reo_sigmaC PF04582.7 gi|21227133|ref|NP_633055.1| - 1.3 8.0 33.2 5.7 6.0 1.3 5.0 3 2 0 4 4 4 0 Reovirus sigma C capsid protein ABC_tran PF00005.22 gi|21227133|ref|NP_633055.1| - 1.9 8.7 0.0 1.9 8.7 0.0 5.2 3 2 0 3 3 3 0 ABC transporter Tektin PF03148.9 gi|21227134|ref|NP_633056.1| - 0.00021 19.9 0.6 0.00031 19.4 0.4 1.3 1 0 0 1 1 1 1 Tektin family Usp PF00582.21 gi|21227134|ref|NP_633056.1| - 0.083 13.0 0.1 0.29 11.3 0.0 1.9 2 0 0 2 2 2 0 Universal stress protein family Siah-Interact_N PF09032.6 gi|21227134|ref|NP_633056.1| - 0.2 11.7 0.1 0.2 11.7 0.1 2.6 4 0 0 4 4 4 0 Siah interacting protein, N terminal Tup_N PF08581.5 gi|21227134|ref|NP_633056.1| - 0.56 10.4 3.8 0.52 10.5 1.0 2.3 2 1 0 2 2 2 0 Tup N-terminal FeoB_N PF02421.13 gi|21227135|ref|NP_633057.1| - 4.3e-56 188.5 0.3 7e-56 187.8 0.2 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|21227135|ref|NP_633057.1| - 7.6e-28 96.5 26.6 4.6e-15 55.4 5.1 3.0 4 0 0 4 4 4 2 Nucleoside recognition MMR_HSR1 PF01926.18 gi|21227135|ref|NP_633057.1| - 1.6e-16 60.2 0.1 2.9e-16 59.4 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.7 gi|21227135|ref|NP_633057.1| - 1.6e-16 59.4 0.6 1.6e-16 59.4 0.4 3.8 4 0 0 4 4 4 1 Ferrous iron transport protein B C terminus AIG1 PF04548.11 gi|21227135|ref|NP_633057.1| - 0.00012 21.3 0.0 0.00018 20.6 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.18 gi|21227135|ref|NP_633057.1| - 0.0043 16.8 1.1 0.039 13.7 0.0 2.2 1 1 1 2 2 2 1 Dynamin family Miro PF08477.8 gi|21227135|ref|NP_633057.1| - 0.0058 17.1 0.0 0.011 16.2 0.0 1.4 1 0 0 1 1 1 1 Miro-like protein ATP_bind_1 PF03029.12 gi|21227135|ref|NP_633057.1| - 0.0082 15.7 0.4 0.024 14.1 0.1 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein SRPRB PF09439.5 gi|21227135|ref|NP_633057.1| - 0.11 11.7 0.0 0.18 10.9 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Fe_dep_repr_C PF02742.10 gi|21227136|ref|NP_633058.1| - 1.4e-28 98.4 0.9 4.1e-28 96.8 0.2 2.1 2 1 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.14 gi|21227136|ref|NP_633058.1| - 2e-22 78.8 0.8 7.4e-22 77.0 0.3 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.9 gi|21227136|ref|NP_633058.1| - 2.9e-15 55.9 0.7 4.8e-14 52.0 0.2 2.4 2 1 0 2 2 2 1 FeoA domain HTH_24 PF13412.1 gi|21227136|ref|NP_633058.1| - 2e-07 30.2 0.0 1.8e-06 27.2 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|21227136|ref|NP_633058.1| - 3.5e-07 29.8 0.0 1.1e-06 28.2 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|21227136|ref|NP_633058.1| - 1e-06 28.2 0.0 3e-06 26.7 0.0 1.9 2 0 0 2 2 1 1 HTH domain HTH_27 PF13463.1 gi|21227136|ref|NP_633058.1| - 1.7e-06 28.2 0.0 4.4e-06 26.9 0.0 1.7 2 0 0 2 2 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21227136|ref|NP_633058.1| - 1.9e-06 27.4 0.1 3.8e-06 26.5 0.1 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|21227136|ref|NP_633058.1| - 5.8e-06 25.8 0.0 1.4e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_12 PF08461.5 gi|21227136|ref|NP_633058.1| - 7.1e-06 25.6 0.0 1.9e-05 24.2 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_5 PF01022.15 gi|21227136|ref|NP_633058.1| - 9.8e-05 21.9 0.0 0.00018 21.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2250 PF10007.4 gi|21227136|ref|NP_633058.1| - 0.00012 21.9 0.7 0.00022 21.0 0.5 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HrcA_DNA-bdg PF03444.10 gi|21227136|ref|NP_633058.1| - 0.00013 21.3 0.1 0.00027 20.2 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LexA_DNA_bind PF01726.11 gi|21227136|ref|NP_633058.1| - 0.00014 21.3 0.0 0.00034 20.1 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain Rrf2 PF02082.15 gi|21227136|ref|NP_633058.1| - 0.00017 21.6 0.1 0.00072 19.6 0.0 2.1 1 1 0 2 2 2 1 Transcriptional regulator HTH_6 PF01418.12 gi|21227136|ref|NP_633058.1| - 0.00029 20.5 0.0 0.00056 19.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family HTH_IclR PF09339.5 gi|21227136|ref|NP_633058.1| - 0.00053 19.5 0.0 0.00097 18.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.16 gi|21227136|ref|NP_633058.1| - 0.0026 17.1 0.0 0.0071 15.7 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_45 PF14947.1 gi|21227136|ref|NP_633058.1| - 0.0028 17.4 0.2 0.0049 16.6 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix FeoC PF09012.5 gi|21227136|ref|NP_633058.1| - 0.008 15.8 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF4423 PF14394.1 gi|21227136|ref|NP_633058.1| - 0.008 15.7 0.1 0.015 14.8 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_AsnC-type PF13404.1 gi|21227136|ref|NP_633058.1| - 0.019 14.4 0.0 0.044 13.3 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|21227136|ref|NP_633058.1| - 0.026 14.3 0.0 0.051 13.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_28 PF13518.1 gi|21227136|ref|NP_633058.1| - 0.032 14.2 0.0 0.076 13.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.7 gi|21227136|ref|NP_633058.1| - 0.049 13.8 0.0 0.099 12.8 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein TFIIE_alpha PF02002.12 gi|21227136|ref|NP_633058.1| - 0.059 12.8 0.0 0.14 11.7 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit DUF4093 PF13331.1 gi|21227136|ref|NP_633058.1| - 0.067 13.4 0.0 4.9 7.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4093) HTH_23 PF13384.1 gi|21227136|ref|NP_633058.1| - 0.069 12.8 0.0 0.19 11.4 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_10 PF04967.7 gi|21227136|ref|NP_633058.1| - 0.074 12.6 0.0 0.21 11.2 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain HTH_1 PF00126.22 gi|21227136|ref|NP_633058.1| - 0.084 12.6 0.0 0.4 10.4 0.0 2.2 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family IF2_N PF04760.10 gi|21227136|ref|NP_633058.1| - 0.084 12.5 0.1 0.36 10.5 0.0 2.1 2 0 0 2 2 1 0 Translation initiation factor IF-2, N-terminal region GLTP PF08718.6 gi|21227136|ref|NP_633058.1| - 0.091 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) Acetyltransf_1 PF00583.19 gi|21227137|ref|NP_633059.1| - 1.1e-13 50.9 0.0 1.7e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21227137|ref|NP_633059.1| - 6.7e-11 42.2 0.0 1.2e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21227137|ref|NP_633059.1| - 6.2e-09 36.0 0.0 8.9e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227137|ref|NP_633059.1| - 2.3e-06 27.4 0.0 6.7e-06 25.9 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21227137|ref|NP_633059.1| - 2.9e-06 27.3 0.0 4.4e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21227137|ref|NP_633059.1| - 0.00017 21.7 0.0 0.00024 21.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21227137|ref|NP_633059.1| - 0.00027 20.7 0.1 0.00038 20.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.5 gi|21227137|ref|NP_633059.1| - 0.0025 17.5 0.0 0.0079 15.9 0.0 1.9 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.1 gi|21227137|ref|NP_633059.1| - 0.005 16.7 0.0 0.0067 16.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain BioY PF02632.9 gi|21227138|ref|NP_633060.1| - 4.5e-47 159.4 18.8 6.7e-47 158.8 13.0 1.2 1 0 0 1 1 1 1 BioY family ECF-ribofla_trS PF07155.7 gi|21227138|ref|NP_633060.1| - 0.00067 19.4 1.7 0.00067 19.4 1.2 2.9 2 1 1 3 3 3 1 ECF-type riboflavin transporter, S component DUF3816 PF12822.2 gi|21227138|ref|NP_633060.1| - 0.013 15.3 18.4 0.018 14.9 12.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3816) ABC_tran PF00005.22 gi|21227139|ref|NP_633061.1| - 5.5e-28 97.9 0.0 9.2e-28 97.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227139|ref|NP_633061.1| - 5.1e-10 39.8 0.1 1.9e-07 31.3 0.0 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21227139|ref|NP_633061.1| - 9.9e-10 38.0 0.3 1.7e-08 34.0 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21227139|ref|NP_633061.1| - 0.0016 17.5 0.1 0.13 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.2 gi|21227139|ref|NP_633061.1| - 0.0055 16.1 0.0 0.22 10.9 0.0 2.2 2 0 0 2 2 2 1 AAA-like domain AAA_29 PF13555.1 gi|21227139|ref|NP_633061.1| - 0.008 15.6 0.2 0.017 14.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21227139|ref|NP_633061.1| - 0.015 15.4 0.2 0.38 10.9 0.1 2.7 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|21227139|ref|NP_633061.1| - 0.022 14.1 0.1 0.31 10.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|21227139|ref|NP_633061.1| - 0.041 13.7 0.0 7.8 6.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.1 gi|21227139|ref|NP_633061.1| - 0.067 11.6 0.1 0.21 10.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain Zot PF05707.7 gi|21227139|ref|NP_633061.1| - 0.077 12.4 0.3 1.7 8.0 0.2 2.5 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) RecA PF00154.16 gi|21227139|ref|NP_633061.1| - 0.077 12.0 0.2 5 6.0 0.0 2.3 1 1 1 2 2 2 0 recA bacterial DNA recombination protein AAA_18 PF13238.1 gi|21227139|ref|NP_633061.1| - 0.12 12.7 0.8 3.1 8.1 0.1 2.6 2 1 1 3 3 3 0 AAA domain MobB PF03205.9 gi|21227139|ref|NP_633061.1| - 0.12 12.0 0.5 0.25 11.0 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.22 gi|21227140|ref|NP_633062.1| - 8.5e-31 107.0 0.0 1.7e-30 106.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227140|ref|NP_633062.1| - 1.1e-09 38.6 0.1 9.9e-06 25.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|21227140|ref|NP_633062.1| - 3.9e-05 24.0 0.1 0.00012 22.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|21227140|ref|NP_633062.1| - 4.7e-05 22.2 0.0 0.00011 21.0 0.0 1.5 1 0 0 1 1 1 1 ArgK protein AAA_29 PF13555.1 gi|21227140|ref|NP_633062.1| - 0.001 18.5 0.0 0.0021 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21227140|ref|NP_633062.1| - 0.0017 18.3 0.0 0.0058 16.6 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.14 gi|21227140|ref|NP_633062.1| - 0.01 15.0 0.0 0.12 11.5 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|21227140|ref|NP_633062.1| - 0.013 14.9 0.1 2.8 7.2 0.1 2.3 2 0 0 2 2 2 0 AAA-like domain AAA_15 PF13175.1 gi|21227140|ref|NP_633062.1| - 0.016 14.2 0.1 0.56 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.1 gi|21227140|ref|NP_633062.1| - 0.018 15.1 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Imm5 PF14423.1 gi|21227140|ref|NP_633062.1| - 0.055 13.0 0.1 0.077 12.5 0.0 1.2 1 0 0 1 1 1 0 Immunity protein Imm5 DUF258 PF03193.11 gi|21227140|ref|NP_633062.1| - 0.067 12.3 0.1 0.13 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SbcCD_C PF13558.1 gi|21227140|ref|NP_633062.1| - 0.07 13.0 0.0 0.69 9.8 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.1 gi|21227140|ref|NP_633062.1| - 0.11 11.9 0.0 0.62 9.4 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_14 PF13173.1 gi|21227140|ref|NP_633062.1| - 0.11 12.3 0.0 1.7 8.5 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|21227140|ref|NP_633062.1| - 0.14 11.7 1.2 0.22 11.0 0.0 1.9 3 0 0 3 3 3 0 AAA domain Miro PF08477.8 gi|21227140|ref|NP_633062.1| - 0.14 12.6 0.9 0.31 11.5 0.1 1.9 2 0 0 2 2 2 0 Miro-like protein CbiQ PF02361.11 gi|21227141|ref|NP_633063.1| - 3.7e-37 128.0 9.8 5.1e-37 127.6 6.8 1.1 1 0 0 1 1 1 1 Cobalt transport protein HTH_5 PF01022.15 gi|21227142|ref|NP_633064.1| - 3.3e-17 61.8 1.5 5.4e-17 61.1 1.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227142|ref|NP_633064.1| - 1.2e-12 47.3 1.2 2.3e-12 46.5 0.9 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Arg_repressor PF01316.16 gi|21227142|ref|NP_633064.1| - 5.1e-05 22.7 0.1 0.00011 21.6 0.0 1.6 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain TrmB PF01978.14 gi|21227142|ref|NP_633064.1| - 0.00023 20.8 0.0 0.0004 20.0 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|21227142|ref|NP_633064.1| - 0.00046 19.7 0.2 0.00075 19.1 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|21227142|ref|NP_633064.1| - 0.00074 19.4 0.1 0.0017 18.3 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF4423 PF14394.1 gi|21227142|ref|NP_633064.1| - 0.0087 15.6 0.4 0.12 11.9 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) MarR PF01047.17 gi|21227142|ref|NP_633064.1| - 0.023 14.3 0.2 0.023 14.3 0.2 1.6 2 0 0 2 2 2 0 MarR family HTH_1 PF00126.22 gi|21227142|ref|NP_633064.1| - 0.041 13.6 0.1 0.13 12.0 0.1 1.8 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.7 gi|21227142|ref|NP_633064.1| - 0.042 13.5 0.1 0.12 12.0 0.0 1.9 1 1 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.1 gi|21227142|ref|NP_633064.1| - 0.13 12.1 0.4 0.28 11.0 0.3 1.8 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain DUF318 PF03773.8 gi|21227143|ref|NP_633065.1| - 3.5e-48 164.1 16.8 3.3e-47 160.9 11.6 2.0 1 1 0 1 1 1 1 Predicted permease PspC PF04024.7 gi|21227144|ref|NP_633066.1| - 6.1e-23 80.0 0.3 7.5e-23 79.7 0.2 1.1 1 0 0 1 1 1 1 PspC domain HTH_29 PF13551.1 gi|21227145|ref|NP_633067.1| - 2.7e-25 88.6 0.1 1.1e-24 86.7 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21227145|ref|NP_633067.1| - 1.2e-10 41.9 0.1 6.1e-09 36.5 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21227145|ref|NP_633067.1| - 9.3e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|21227145|ref|NP_633067.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|21227145|ref|NP_633067.1| - 0.04 13.9 0.0 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|21227145|ref|NP_633067.1| - 0.051 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21227145|ref|NP_633067.1| - 0.15 11.7 0.8 0.59 9.8 0.1 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DDE_3 PF13358.1 gi|21227146|ref|NP_633068.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease Aminotran_4 PF01063.14 gi|21227147|ref|NP_633069.1| - 1.2e-50 172.1 0.0 1.4e-50 171.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class IV MoeA_N PF03453.12 gi|21227148|ref|NP_633070.1| - 1.4e-54 183.7 0.7 2.3e-54 183.0 0.5 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) PBP_like PF12727.2 gi|21227148|ref|NP_633070.1| - 2.2e-53 180.0 0.4 6.2e-53 178.6 0.0 1.9 2 0 0 2 2 2 1 PBP superfamily domain MoCF_biosynth PF00994.19 gi|21227148|ref|NP_633070.1| - 2.7e-29 101.4 0.0 5.8e-29 100.3 0.0 1.6 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|21227148|ref|NP_633070.1| - 1.2e-14 53.9 0.0 8.5e-14 51.2 0.0 2.5 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Phosphonate-bd PF12974.2 gi|21227148|ref|NP_633070.1| - 0.0065 15.8 0.0 0.014 14.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein T2SE PF00437.15 gi|21227148|ref|NP_633070.1| - 0.035 12.9 0.0 0.063 12.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.18 gi|21227149|ref|NP_633071.1| - 3.4e-18 65.6 0.1 6.1e-18 64.8 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 gi|21227149|ref|NP_633071.1| - 1.3e-16 60.1 0.0 2.7e-16 59.1 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|21227149|ref|NP_633071.1| - 6.1e-12 45.0 0.0 1.9e-11 43.5 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B Miro PF08477.8 gi|21227149|ref|NP_633071.1| - 0.00075 19.9 0.5 0.0021 18.5 0.0 1.9 2 0 0 2 2 2 1 Miro-like protein Dynamin_N PF00350.18 gi|21227149|ref|NP_633071.1| - 0.0018 18.1 2.8 0.66 9.7 0.2 3.1 2 1 1 3 3 3 2 Dynamin family DUF258 PF03193.11 gi|21227149|ref|NP_633071.1| - 0.026 13.7 0.2 0.15 11.2 0.2 2.1 2 1 0 2 2 2 0 Protein of unknown function, DUF258 AIG1 PF04548.11 gi|21227149|ref|NP_633071.1| - 0.028 13.5 0.6 0.042 12.9 0.0 1.6 2 0 0 2 2 2 0 AIG1 family SRPRB PF09439.5 gi|21227149|ref|NP_633071.1| - 0.11 11.7 0.0 0.25 10.5 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF1192 PF06698.6 gi|21227149|ref|NP_633071.1| - 0.12 12.1 0.2 0.12 12.1 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) DUF2106 PF09879.4 gi|21227149|ref|NP_633071.1| - 0.12 11.6 0.0 0.29 10.4 0.0 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2106) Dala_Dala_lig_C PF07478.8 gi|21227150|ref|NP_633072.1| - 2.1e-26 92.6 0.0 3.3e-26 91.9 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Methyltransf_25 PF13649.1 gi|21227150|ref|NP_633072.1| - 3e-18 66.0 0.0 4e-17 62.4 0.0 2.5 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227150|ref|NP_633072.1| - 8.6e-18 64.6 0.0 2e-17 63.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227150|ref|NP_633072.1| - 2.9e-17 62.6 0.0 5.2e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227150|ref|NP_633072.1| - 7.6e-17 61.9 0.0 2.2e-16 60.4 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain ATP-grasp_4 PF13535.1 gi|21227150|ref|NP_633072.1| - 6.8e-16 58.5 0.0 1.8e-14 53.9 0.0 2.5 2 1 0 2 2 2 1 ATP-grasp domain Ubie_methyltran PF01209.13 gi|21227150|ref|NP_633072.1| - 1.9e-14 53.3 0.0 2.9e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|21227150|ref|NP_633072.1| - 2.8e-11 43.3 0.0 6.8e-11 42.1 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21227150|ref|NP_633072.1| - 2.5e-09 37.1 0.0 1e-08 35.1 0.0 2.1 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227150|ref|NP_633072.1| - 3.5e-08 33.8 0.0 9.1e-07 29.2 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain ATPgrasp_Ter PF15632.1 gi|21227150|ref|NP_633072.1| - 7.1e-08 31.5 0.0 0.011 14.4 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon TehB PF03848.9 gi|21227150|ref|NP_633072.1| - 6e-06 25.5 0.0 9.1e-06 24.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.9 gi|21227150|ref|NP_633072.1| - 0.00035 19.9 0.0 0.00065 19.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Pox_MCEL PF03291.11 gi|21227150|ref|NP_633072.1| - 0.00064 18.6 0.0 0.068 12.0 0.0 2.1 1 1 1 2 2 2 1 mRNA capping enzyme CMAS PF02353.15 gi|21227150|ref|NP_633072.1| - 0.0012 17.9 0.0 0.0019 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.12 gi|21227150|ref|NP_633072.1| - 0.0035 16.4 0.0 0.021 13.8 0.0 2.1 2 0 0 2 2 2 1 Putative methyltransferase ATP-grasp_3 PF02655.9 gi|21227150|ref|NP_633072.1| - 0.016 15.0 0.0 0.037 13.9 0.0 1.6 1 1 0 1 1 1 0 ATP-grasp domain UPF0020 PF01170.13 gi|21227150|ref|NP_633072.1| - 0.13 11.8 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 CitMHS PF03600.11 gi|21227151|ref|NP_633073.1| - 3.3e-30 104.8 25.5 1.3e-29 102.8 12.3 2.1 1 1 1 2 2 2 2 Citrate transporter UPF0150 PF03681.10 gi|21227152|ref|NP_633074.1| - 1.8e-09 37.0 0.1 2.2e-09 36.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|21227152|ref|NP_633074.1| - 0.01 15.8 0.0 0.012 15.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) MC1 PF05854.6 gi|21227153|ref|NP_633075.1| - 1.4e-45 153.1 1.9 1.6e-45 153.0 1.3 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 UPF0150 PF03681.10 gi|21227154|ref|NP_633076.1| - 3.3e-12 45.8 0.0 4.1e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|21227154|ref|NP_633076.1| - 0.00088 19.2 0.1 0.0013 18.7 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3832) Humanin PF15040.1 gi|21227154|ref|NP_633076.1| - 0.089 12.0 1.3 0.2 10.9 0.0 2.0 2 0 0 2 2 2 0 Humanin family GARS_C PF02843.11 gi|21227154|ref|NP_633076.1| - 0.14 12.2 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain PAS_3 PF08447.6 gi|21227155|ref|NP_633077.1| - 5.9e-33 112.8 3.6 2.1e-15 56.6 0.1 3.2 3 0 0 3 3 3 2 PAS fold DUF2111 PF09884.4 gi|21227155|ref|NP_633077.1| - 7.1e-33 112.2 0.5 3.5e-32 110.0 0.2 2.3 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2111) PAS_9 PF13426.1 gi|21227155|ref|NP_633077.1| - 4e-17 62.4 1.8 1.9e-06 28.2 0.0 3.4 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.1 gi|21227155|ref|NP_633077.1| - 6.4e-15 55.9 0.0 2.2e-12 47.7 0.0 2.5 2 0 0 2 2 2 1 GAF domain PAS PF00989.19 gi|21227155|ref|NP_633077.1| - 1e-10 41.3 2.0 0.00023 20.9 0.1 3.0 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|21227155|ref|NP_633077.1| - 2.3e-09 37.2 0.1 0.001 19.0 0.0 3.4 3 0 0 3 3 3 2 PAS fold GAF_3 PF13492.1 gi|21227155|ref|NP_633077.1| - 6.4e-06 26.2 0.0 8.8e-05 22.6 0.0 2.3 2 0 0 2 2 2 1 GAF domain PAS_11 PF14598.1 gi|21227155|ref|NP_633077.1| - 9e-06 25.6 0.0 0.19 11.6 0.0 2.7 2 0 0 2 2 2 2 PAS domain DUF3237 PF11578.3 gi|21227155|ref|NP_633077.1| - 0.0046 16.2 0.0 2.7 7.2 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3237) GAF PF01590.21 gi|21227155|ref|NP_633077.1| - 0.022 14.9 0.0 0.06 13.4 0.0 1.7 2 0 0 2 2 2 0 GAF domain DUF3654 PF12376.3 gi|21227155|ref|NP_633077.1| - 0.028 14.2 0.6 0.13 12.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) DUF3155 PF11352.3 gi|21227155|ref|NP_633077.1| - 0.035 14.3 0.1 8.9 6.6 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3155) NosD PF05048.8 gi|21227156|ref|NP_633078.1| - 3.3e-87 291.5 95.4 1.8e-40 138.6 21.7 4.1 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21227156|ref|NP_633078.1| - 7.7e-48 162.2 97.3 6.7e-18 64.9 13.1 4.2 1 1 3 4 4 4 4 Right handed beta helix region Pectinesterase PF01095.14 gi|21227156|ref|NP_633078.1| - 0.0012 17.5 0.2 0.0032 16.0 0.0 1.8 2 0 0 2 2 2 1 Pectinesterase B12-binding PF02310.14 gi|21227157|ref|NP_633079.1| - 1.2e-18 67.1 0.3 1.5e-18 66.8 0.2 1.1 1 0 0 1 1 1 1 B12 binding domain Peripla_BP_6 PF13458.1 gi|21227157|ref|NP_633079.1| - 0.0022 17.3 0.2 0.0028 17.0 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein PTS_IIB PF02302.12 gi|21227157|ref|NP_633079.1| - 0.024 15.1 0.7 1.1 9.7 0.0 2.3 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit ABC2_membrane_3 PF12698.2 gi|21227158|ref|NP_633080.1| - 3.6e-45 154.5 16.8 4.2e-45 154.2 11.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|21227158|ref|NP_633080.1| - 1e-18 67.1 7.2 3.5e-18 65.4 5.0 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21227158|ref|NP_633080.1| - 2.3e-12 46.6 5.1 3.6e-12 45.9 3.6 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|21227158|ref|NP_633080.1| - 4.4e-07 29.2 19.3 4.4e-07 29.2 13.4 2.7 2 1 1 3 3 3 1 ABC-2 type transporter Git3 PF11710.3 gi|21227158|ref|NP_633080.1| - 0.0007 19.2 6.0 0.084 12.4 2.9 2.3 2 0 0 2 2 2 2 G protein-coupled glucose receptor regulating Gpa2 ABC_tran PF00005.22 gi|21227159|ref|NP_633081.1| - 2.7e-28 98.9 0.0 5e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.1 gi|21227159|ref|NP_633081.1| - 7.7e-18 64.7 0.1 1.9e-17 63.5 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.1 gi|21227159|ref|NP_633081.1| - 7.1e-13 49.1 3.0 1.4e-11 44.8 2.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21227159|ref|NP_633081.1| - 0.00051 20.0 0.2 0.0017 18.3 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.1 gi|21227159|ref|NP_633081.1| - 0.0011 19.3 0.2 0.0011 19.3 0.1 2.7 2 1 0 3 3 3 1 AAA domain AAA_22 PF13401.1 gi|21227159|ref|NP_633081.1| - 0.0015 18.6 0.4 0.0069 16.5 0.3 2.0 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21227159|ref|NP_633081.1| - 0.0017 17.5 0.3 0.0053 15.9 0.0 2.0 3 0 0 3 3 3 1 Protein of unknown function, DUF258 Arch_ATPase PF01637.13 gi|21227159|ref|NP_633081.1| - 0.0023 17.6 0.3 0.0053 16.4 0.1 1.7 2 0 0 2 2 2 1 Archaeal ATPase NTPase_1 PF03266.10 gi|21227159|ref|NP_633081.1| - 0.0041 16.8 0.4 0.49 10.1 0.0 2.6 2 1 1 3 3 3 1 NTPase AAA_13 PF13166.1 gi|21227159|ref|NP_633081.1| - 0.0042 15.6 1.0 0.36 9.2 0.0 2.5 1 1 0 2 2 2 1 AAA domain UPF0079 PF02367.12 gi|21227159|ref|NP_633081.1| - 0.0058 16.2 0.1 0.02 14.4 0.0 1.9 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 SMC_N PF02463.14 gi|21227159|ref|NP_633081.1| - 0.0076 15.4 0.2 0.97 8.6 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21227159|ref|NP_633081.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|21227159|ref|NP_633081.1| - 0.012 15.1 0.0 0.045 13.3 0.0 2.0 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|21227159|ref|NP_633081.1| - 0.022 14.4 0.0 0.053 13.2 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.1 gi|21227159|ref|NP_633081.1| - 0.033 14.0 0.0 0.07 13.0 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA PF00004.24 gi|21227159|ref|NP_633081.1| - 0.037 14.2 0.5 0.15 12.3 0.3 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Nnf1 PF03980.9 gi|21227159|ref|NP_633081.1| - 0.041 13.8 0.9 0.15 12.0 0.1 2.0 2 0 0 2 2 2 0 Nnf1 PIF1 PF05970.9 gi|21227159|ref|NP_633081.1| - 0.054 12.4 0.1 0.24 10.3 0.0 1.9 2 0 0 2 2 2 0 PIF1-like helicase cobW PF02492.14 gi|21227159|ref|NP_633081.1| - 0.065 12.6 0.4 0.17 11.3 0.1 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.1 gi|21227159|ref|NP_633081.1| - 0.067 13.0 0.0 0.89 9.4 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|21227159|ref|NP_633081.1| - 0.068 12.8 0.1 0.36 10.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21227159|ref|NP_633081.1| - 0.08 13.7 0.6 0.31 11.8 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|21227159|ref|NP_633081.1| - 0.14 11.9 0.0 0.41 10.4 0.0 1.8 1 0 0 1 1 1 0 Part of AAA domain AAA_14 PF13173.1 gi|21227159|ref|NP_633081.1| - 0.37 10.6 2.0 2.8 7.8 0.4 2.8 2 2 0 2 2 2 0 AAA domain AAA_15 PF13175.1 gi|21227159|ref|NP_633081.1| - 0.43 9.5 4.6 8.9 5.2 0.5 2.4 1 1 1 2 2 2 0 AAA ATPase domain RibD_C PF01872.12 gi|21227160|ref|NP_633082.1| - 1e-13 51.3 0.0 1.3e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 RibD C-terminal domain Oxidored_q1 PF00361.15 gi|21227161|ref|NP_633083.1| - 4.2e-58 196.7 19.6 4.2e-58 196.7 13.6 3.1 2 1 2 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains SID-1_RNA_chan PF13965.1 gi|21227161|ref|NP_633083.1| - 2.7 6.0 7.0 0.13 10.4 0.8 1.7 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 NADHdh PF00146.16 gi|21227162|ref|NP_633084.1| - 7.5e-13 48.2 18.8 1e-12 47.8 13.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q1 PF00361.15 gi|21227164|ref|NP_633086.1| - 3.3e-47 161.0 20.3 3.3e-47 161.0 14.1 2.4 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains DUF4212 PF13937.1 gi|21227164|ref|NP_633086.1| - 4 7.5 7.8 0.79 9.7 1.8 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) Complex1_49kDa PF00346.14 gi|21227165|ref|NP_633087.1| - 4.7e-25 88.1 0.0 2.2e-19 69.5 0.0 2.2 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.14 gi|21227165|ref|NP_633087.1| - 2.1e-21 76.0 0.0 3.8e-21 75.2 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.14 gi|21227165|ref|NP_633087.1| - 3.4e-09 36.0 0.2 0.001 17.9 0.0 2.1 2 0 0 2 2 2 2 Nickel-dependent hydrogenase Oxidored_q6 PF01058.17 gi|21227166|ref|NP_633088.1| - 1.4e-22 79.7 0.0 1.8e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit VKOR PF07884.9 gi|21227167|ref|NP_633089.1| - 0.1 12.4 6.0 0.14 12.0 4.1 1.1 1 0 0 1 1 1 0 Vitamin K epoxide reductase family DUF1724 PF08350.5 gi|21227169|ref|NP_633091.1| - 1.9e-25 88.1 0.3 3.3e-25 87.4 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_11 PF08279.7 gi|21227169|ref|NP_633091.1| - 0.0012 18.4 0.1 0.0026 17.3 0.1 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.14 gi|21227169|ref|NP_633091.1| - 0.012 15.3 0.1 0.03 14.0 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|21227169|ref|NP_633091.1| - 0.015 15.1 0.1 0.038 13.8 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix Phage_rep_org_N PF09681.5 gi|21227169|ref|NP_633091.1| - 0.018 14.5 0.1 0.05 13.1 0.1 1.7 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_27 PF13463.1 gi|21227169|ref|NP_633091.1| - 0.02 15.1 0.0 0.039 14.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|21227169|ref|NP_633091.1| - 0.052 13.2 0.0 0.097 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227169|ref|NP_633091.1| - 0.098 12.4 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.9 gi|21227169|ref|NP_633091.1| - 0.1 12.3 0.0 0.28 10.9 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Response_reg PF00072.19 gi|21227170|ref|NP_633092.1| - 8.1e-29 99.8 0.4 9e-29 99.7 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain NCD1 PF04904.8 gi|21227170|ref|NP_633092.1| - 0.088 12.5 0.1 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 NAB conserved region 1 (NCD1) E1-E2_ATPase PF00122.15 gi|21227171|ref|NP_633093.1| - 2.6e-66 222.9 0.3 8.1e-66 221.3 0.2 1.9 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|21227171|ref|NP_633093.1| - 7.2e-43 146.2 5.1 7.4e-43 146.1 0.9 2.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|21227171|ref|NP_633093.1| - 3.5e-36 125.6 0.1 1.2e-30 107.5 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|21227171|ref|NP_633093.1| - 4.3e-19 68.2 0.0 8.1e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Cation_ATPase_N PF00690.21 gi|21227171|ref|NP_633093.1| - 1.4e-18 66.1 0.1 4e-18 64.6 0.1 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|21227171|ref|NP_633093.1| - 1.1e-16 61.6 0.0 3.1e-16 60.1 0.0 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227171|ref|NP_633093.1| - 1.2e-09 38.0 1.6 1.2e-05 25.0 1.1 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase DUF3650 PF12368.3 gi|21227171|ref|NP_633093.1| - 0.025 14.0 1.4 0.098 12.1 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3650) HAD_2 PF13419.1 gi|21227171|ref|NP_633093.1| - 0.052 13.7 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase URO-D PF01208.12 gi|21227172|ref|NP_633094.1| - 7.9e-90 301.2 0.0 9e-90 301.0 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF4445 PF14574.1 gi|21227173|ref|NP_633095.1| - 1.4e-96 323.2 7.3 2.3e-96 322.5 5.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4_7 PF12838.2 gi|21227173|ref|NP_633095.1| - 1.1e-06 28.9 10.5 2.3e-06 27.8 7.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227173|ref|NP_633095.1| - 7.4e-06 26.1 11.0 1.6e-05 25.1 7.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227173|ref|NP_633095.1| - 1.3e-05 24.7 10.7 0.0045 16.7 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227173|ref|NP_633095.1| - 3.2e-05 24.5 10.0 0.00015 22.4 1.5 2.5 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|21227173|ref|NP_633095.1| - 4.4e-05 22.9 3.9 4.4e-05 22.9 2.7 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227173|ref|NP_633095.1| - 5.9e-05 22.8 11.8 0.00046 19.9 1.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227173|ref|NP_633095.1| - 8.8e-05 22.2 12.9 0.00091 18.9 9.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21227173|ref|NP_633095.1| - 0.00016 22.0 2.6 0.011 16.1 0.0 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227173|ref|NP_633095.1| - 0.00081 19.6 4.4 0.013 15.8 0.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227173|ref|NP_633095.1| - 0.00091 19.0 4.3 0.0018 18.1 3.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227173|ref|NP_633095.1| - 0.0053 16.9 12.7 0.011 16.0 1.7 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227173|ref|NP_633095.1| - 0.018 14.9 11.7 0.073 13.0 1.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21227173|ref|NP_633095.1| - 0.043 14.3 17.9 0.69 10.6 4.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21227173|ref|NP_633095.1| - 0.099 12.6 11.2 0.047 13.7 1.2 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227173|ref|NP_633095.1| - 2.2 8.9 9.9 18 5.9 6.9 2.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain cobW PF02492.14 gi|21227174|ref|NP_633096.1| - 1.3e-35 122.4 1.0 1.9e-35 121.9 0.7 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.18 gi|21227174|ref|NP_633096.1| - 0.00032 20.1 1.5 0.00095 18.6 1.0 1.8 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.17 gi|21227174|ref|NP_633096.1| - 0.00034 20.0 2.7 0.00066 19.1 0.4 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MobB PF03205.9 gi|21227174|ref|NP_633096.1| - 0.0018 18.0 2.5 0.0038 16.9 1.1 2.1 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|21227174|ref|NP_633096.1| - 0.0043 15.8 0.5 0.011 14.5 0.3 1.7 1 0 0 1 1 1 1 ArgK protein DUF2922 PF11148.3 gi|21227174|ref|NP_633096.1| - 0.0077 15.8 1.3 0.067 12.8 0.1 3.0 3 0 0 3 3 3 1 Protein of unknown function (DUF2922) AAA_19 PF13245.1 gi|21227174|ref|NP_633096.1| - 0.021 14.5 0.2 0.047 13.4 0.1 1.5 1 0 0 1 1 1 0 Part of AAA domain KTI12 PF08433.5 gi|21227174|ref|NP_633096.1| - 0.036 13.2 0.0 0.089 11.9 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_31 PF13614.1 gi|21227174|ref|NP_633096.1| - 0.048 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain LpxK PF02606.9 gi|21227174|ref|NP_633096.1| - 0.06 12.3 0.9 0.11 11.4 0.7 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase SelP_N PF04592.9 gi|21227174|ref|NP_633096.1| - 5 6.4 7.6 1.3 8.3 3.2 1.5 2 0 0 2 2 2 0 Selenoprotein P, N terminal region B12-binding PF02310.14 gi|21227175|ref|NP_633097.1| - 5e-17 61.8 0.2 7.7e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21227175|ref|NP_633097.1| - 3.2e-13 49.4 0.0 7.9e-13 48.2 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain MtaB PF12176.3 gi|21227176|ref|NP_633098.1| - 3.9e-252 836.6 5.8 4.3e-252 836.4 4.0 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Grp1_Fun34_YaaH PF01184.14 gi|21227177|ref|NP_633099.1| - 9.2e-41 139.4 27.7 1.1e-40 139.2 19.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DIM PF08194.7 gi|21227177|ref|NP_633099.1| - 1.3 9.0 5.7 10 6.1 2.0 3.0 2 0 0 2 2 2 0 DIM protein Cation_efflux PF01545.16 gi|21227178|ref|NP_633100.1| - 3e-49 167.6 0.1 3.4e-49 167.4 0.1 1.0 1 0 0 1 1 1 1 Cation efflux family DUF2244 PF10003.4 gi|21227178|ref|NP_633100.1| - 0.099 12.0 0.1 7.7 5.8 0.1 2.5 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) Hydantoinase_A PF01968.13 gi|21227179|ref|NP_633101.1| - 1.6e-86 290.0 0.6 9.1e-86 287.5 0.0 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21227179|ref|NP_633101.1| - 5.1e-44 149.8 0.1 3.8e-40 137.2 0.0 2.7 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21227179|ref|NP_633101.1| - 8.7e-06 24.3 0.7 0.056 11.7 0.0 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21227179|ref|NP_633101.1| - 0.0006 19.1 0.2 0.25 10.6 0.0 3.2 3 0 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family KH_5 PF13184.1 gi|21227179|ref|NP_633101.1| - 0.11 12.3 0.4 25 4.7 0.0 3.2 3 0 0 3 3 3 0 NusA-like KH domain StbA PF06406.6 gi|21227179|ref|NP_633101.1| - 0.11 11.3 0.0 0.23 10.3 0.0 1.4 1 0 0 1 1 1 0 StbA protein FtsA PF14450.1 gi|21227179|ref|NP_633101.1| - 0.13 12.0 1.4 3.7 7.4 0.0 2.7 2 0 0 2 2 2 0 Cell division protein FtsA EutA PF06277.6 gi|21227179|ref|NP_633101.1| - 0.25 9.8 1.1 1.9 6.9 0.1 2.3 3 0 0 3 3 3 0 Ethanolamine utilisation protein EutA Hydantoinase_A PF01968.13 gi|21227180|ref|NP_633102.1| - 6.5e-84 281.4 0.7 6.6e-83 278.1 0.0 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21227180|ref|NP_633102.1| - 8.2e-47 158.9 1.2 8.6e-43 145.8 0.0 3.1 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21227180|ref|NP_633102.1| - 1e-06 27.3 1.4 0.00074 17.9 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21227180|ref|NP_633102.1| - 0.00025 20.4 0.3 0.037 13.3 0.0 2.9 3 0 0 3 3 3 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.1 gi|21227180|ref|NP_633102.1| - 0.028 14.2 4.1 1.2 8.9 0.4 2.7 1 1 1 2 2 2 0 Cell division protein FtsA DDR PF08841.5 gi|21227180|ref|NP_633102.1| - 0.031 13.1 0.8 0.054 12.3 0.1 1.7 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain StbA PF06406.6 gi|21227180|ref|NP_633102.1| - 0.12 11.2 0.0 0.23 10.3 0.0 1.4 1 0 0 1 1 1 0 StbA protein DUF1724 PF08350.5 gi|21227181|ref|NP_633103.1| - 9.8e-27 92.2 0.1 1.9e-26 91.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|21227181|ref|NP_633103.1| - 0.0018 18.5 0.2 0.0043 17.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21227181|ref|NP_633103.1| - 0.0022 17.6 0.1 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|21227181|ref|NP_633103.1| - 0.0035 17.0 0.4 0.027 14.1 0.1 2.3 2 0 0 2 2 2 1 MarR family HTH_45 PF14947.1 gi|21227181|ref|NP_633103.1| - 0.0061 16.3 0.4 0.021 14.6 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_11 PF08279.7 gi|21227181|ref|NP_633103.1| - 0.048 13.3 1.4 0.14 11.7 0.3 2.2 2 0 0 2 2 2 0 HTH domain DUF1724 PF08350.5 gi|21227182|ref|NP_633104.1| - 1.2e-28 98.3 0.3 4.1e-28 96.7 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21227182|ref|NP_633104.1| - 0.0018 17.8 0.4 0.0032 17.0 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|21227182|ref|NP_633104.1| - 0.031 14.6 0.1 0.058 13.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain ParcG PF10274.4 gi|21227182|ref|NP_633104.1| - 0.063 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 Parkin co-regulated protein HTH_20 PF12840.2 gi|21227182|ref|NP_633104.1| - 0.067 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.14 gi|21227182|ref|NP_633104.1| - 0.088 12.5 0.1 0.26 11.0 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Phage_rep_org_N PF09681.5 gi|21227182|ref|NP_633104.1| - 0.13 11.8 1.9 0.15 11.6 0.3 1.8 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) DUF4349 PF14257.1 gi|21227183|ref|NP_633105.1| - 0.027 13.7 0.7 0.034 13.3 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Cupredoxin_1 PF13473.1 gi|21227183|ref|NP_633105.1| - 0.04 13.8 0.0 0.051 13.4 0.0 1.2 1 0 0 1 1 1 0 Cupredoxin-like domain Exo5 PF09810.4 gi|21227183|ref|NP_633105.1| - 0.056 12.6 0.1 0.069 12.3 0.0 1.1 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease MMR_HSR1_C PF08438.5 gi|21227184|ref|NP_633106.1| - 9e-35 119.2 0.0 1.5e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|21227184|ref|NP_633106.1| - 1.6e-15 57.0 0.0 7.8e-15 54.8 0.0 2.2 1 1 1 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.16 gi|21227184|ref|NP_633106.1| - 7.5e-14 51.3 0.0 1.7e-13 50.1 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.13 gi|21227184|ref|NP_633106.1| - 4.3e-09 35.8 0.9 5.8e-07 28.9 0.0 2.8 3 0 0 3 3 3 2 Ferrous iron transport protein B Prenyltransf PF01255.14 gi|21227185|ref|NP_633107.1| - 6.9e-30 103.8 0.0 6.8e-29 100.5 0.0 2.0 2 0 0 2 2 2 1 Putative undecaprenyl diphosphate synthase DUF1922 PF09082.5 gi|21227186|ref|NP_633108.1| - 0.0034 17.3 0.3 0.0086 16.1 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1922) Ogr_Delta PF04606.7 gi|21227186|ref|NP_633108.1| - 0.011 15.3 1.5 3.9 7.1 0.2 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger TF_Zn_Ribbon PF08271.7 gi|21227186|ref|NP_633108.1| - 0.015 14.6 0.0 0.035 13.4 0.0 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|21227186|ref|NP_633108.1| - 0.018 14.8 2.8 0.036 13.8 2.0 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|21227186|ref|NP_633108.1| - 0.051 13.0 1.1 6.4 6.3 0.0 2.4 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger OrfB_Zn_ribbon PF07282.6 gi|21227186|ref|NP_633108.1| - 0.053 13.1 1.6 0.13 11.9 1.1 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.1 gi|21227186|ref|NP_633108.1| - 0.075 12.2 0.8 22 4.3 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain DUF655 PF04919.7 gi|21227186|ref|NP_633108.1| - 0.079 12.6 0.0 1.4 8.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF655) DZR PF12773.2 gi|21227186|ref|NP_633108.1| - 0.082 12.7 2.4 0.099 12.4 0.9 1.7 2 0 0 2 2 2 0 Double zinc ribbon PHD PF00628.24 gi|21227186|ref|NP_633108.1| - 0.089 12.4 0.8 0.18 11.5 0.6 1.5 1 0 0 1 1 1 0 PHD-finger C1_1 PF00130.17 gi|21227186|ref|NP_633108.1| - 0.12 12.0 2.7 0.21 11.3 1.8 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF1610 PF07754.6 gi|21227186|ref|NP_633108.1| - 0.16 12.1 0.2 0.16 12.1 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) Ribosomal_S27e PF01667.12 gi|21227186|ref|NP_633108.1| - 0.2 11.2 3.9 0.09 12.3 1.1 1.6 2 0 0 2 2 1 0 Ribosomal protein S27 zinc_ribbon_5 PF13719.1 gi|21227186|ref|NP_633108.1| - 0.2 11.2 5.2 0.7 9.5 3.6 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21227186|ref|NP_633108.1| - 0.3 10.8 5.7 1 9.1 3.9 2.0 1 1 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|21227186|ref|NP_633108.1| - 0.33 10.4 2.9 0.78 9.2 2.0 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.5 gi|21227186|ref|NP_633108.1| - 1.5 8.8 4.8 22 5.1 3.4 2.5 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.1 gi|21227186|ref|NP_633108.1| - 1.7 8.2 7.1 10 5.7 3.4 2.9 2 1 0 2 2 2 0 zinc-ribbon domain DUF128 PF01995.11 gi|21227187|ref|NP_633109.1| - 9.9e-95 315.9 0.5 1.2e-94 315.6 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF128 HTH_12 PF08461.5 gi|21227187|ref|NP_633109.1| - 4e-32 109.7 0.8 8.7e-32 108.6 0.5 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.1 gi|21227187|ref|NP_633109.1| - 0.063 13.2 1.1 0.12 12.3 0.8 1.4 1 0 0 1 1 1 0 HTH-like domain HTH_20 PF12840.2 gi|21227187|ref|NP_633109.1| - 0.14 11.9 0.0 0.34 10.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain FUR PF01475.14 gi|21227187|ref|NP_633109.1| - 0.15 11.9 0.0 0.71 9.8 0.0 2.0 2 0 0 2 2 2 0 Ferric uptake regulator family Lactamase_B PF00753.22 gi|21227188|ref|NP_633110.1| - 8.1e-15 54.9 0.1 3e-14 53.1 0.1 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21227188|ref|NP_633110.1| - 9.1e-09 35.1 0.0 1e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain ABC_tran PF00005.22 gi|21227189|ref|NP_633111.1| - 2.2e-21 76.6 0.0 5.5e-21 75.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21227189|ref|NP_633111.1| - 4.8e-10 39.8 0.0 4.5e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21227189|ref|NP_633111.1| - 1.4e-05 24.4 0.1 0.0021 17.3 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|21227189|ref|NP_633111.1| - 0.0014 19.0 0.0 0.0027 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21227189|ref|NP_633111.1| - 0.0059 16.1 0.0 0.013 14.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21227189|ref|NP_633111.1| - 0.0067 15.6 0.0 0.014 14.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_13 PF13166.1 gi|21227189|ref|NP_633111.1| - 0.022 13.2 0.0 0.03 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.10 gi|21227189|ref|NP_633111.1| - 0.046 12.3 0.0 0.06 11.9 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_10 PF12846.2 gi|21227189|ref|NP_633111.1| - 0.058 12.8 0.2 0.12 11.8 0.1 1.5 1 0 0 1 1 1 0 AAA-like domain MutS_V PF00488.16 gi|21227189|ref|NP_633111.1| - 0.059 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 MutS domain V Arch_ATPase PF01637.13 gi|21227189|ref|NP_633111.1| - 0.072 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Archaeal ATPase UPF0051 PF01458.12 gi|21227190|ref|NP_633112.1| - 9.5e-55 185.5 0.0 1.2e-54 185.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) KaiC PF06745.8 gi|21227191|ref|NP_633113.1| - 2.5e-30 105.2 0.1 2.9e-30 105.1 0.0 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.16 gi|21227191|ref|NP_633113.1| - 8.5e-07 28.3 0.0 9.9e-07 28.1 0.0 1.0 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.1 gi|21227191|ref|NP_633113.1| - 0.00016 21.1 0.0 0.00017 21.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.10 gi|21227191|ref|NP_633113.1| - 0.084 11.7 0.0 0.088 11.6 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain KaiC PF06745.8 gi|21227192|ref|NP_633114.1| - 9.6e-76 253.8 1.9 3.3e-42 144.1 0.0 2.4 3 0 0 3 3 3 2 KaiC AAA_25 PF13481.1 gi|21227192|ref|NP_633114.1| - 1.5e-17 63.6 0.0 1.7e-16 60.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain GvpD PF07088.6 gi|21227192|ref|NP_633114.1| - 6.5e-05 21.4 0.0 0.061 11.6 0.0 2.2 2 0 0 2 2 2 2 GvpD gas vesicle protein AAA_16 PF13191.1 gi|21227192|ref|NP_633114.1| - 7.4e-05 22.8 0.7 0.00076 19.5 0.0 2.5 3 0 0 3 3 2 1 AAA ATPase domain RecA PF00154.16 gi|21227192|ref|NP_633114.1| - 0.00017 20.7 0.0 0.00027 20.0 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_17 PF13207.1 gi|21227192|ref|NP_633114.1| - 0.0002 22.1 0.5 0.004 17.9 0.0 2.9 3 0 0 3 3 3 1 AAA domain DnaB_C PF03796.10 gi|21227192|ref|NP_633114.1| - 0.00037 19.4 0.0 0.00073 18.4 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.12 gi|21227192|ref|NP_633114.1| - 0.00091 18.6 0.0 0.0022 17.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_14 PF13173.1 gi|21227192|ref|NP_633114.1| - 0.0011 18.9 0.0 0.0063 16.4 0.0 2.4 2 1 0 2 2 1 1 AAA domain NACHT PF05729.7 gi|21227192|ref|NP_633114.1| - 0.0021 17.7 0.0 0.0041 16.8 0.0 1.6 1 0 0 1 1 1 1 NACHT domain PAXNEB PF05625.6 gi|21227192|ref|NP_633114.1| - 0.0021 16.9 0.2 0.011 14.5 0.1 2.0 2 0 0 2 2 2 1 PAXNEB protein CobU PF02283.11 gi|21227192|ref|NP_633114.1| - 0.0075 15.6 0.0 0.068 12.5 0.0 2.4 2 0 0 2 2 2 1 Cobinamide kinase / cobinamide phosphate guanyltransferase GAS PF13851.1 gi|21227192|ref|NP_633114.1| - 0.01 15.0 5.8 0.016 14.4 4.0 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding AAA_22 PF13401.1 gi|21227192|ref|NP_633114.1| - 0.011 15.8 0.1 0.05 13.7 0.0 2.2 2 1 0 2 2 1 0 AAA domain IncA PF04156.9 gi|21227192|ref|NP_633114.1| - 0.017 14.6 4.3 0.028 14.0 3.0 1.3 1 0 0 1 1 1 0 IncA protein FlaC_arch PF05377.6 gi|21227192|ref|NP_633114.1| - 0.018 14.8 1.0 0.051 13.4 0.7 1.8 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) FrhB_FdhB_N PF04422.8 gi|21227192|ref|NP_633114.1| - 0.034 13.9 0.0 0.091 12.6 0.0 1.7 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term AAA_24 PF13479.1 gi|21227192|ref|NP_633114.1| - 0.037 13.6 0.0 0.11 12.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain FlxA PF14282.1 gi|21227192|ref|NP_633114.1| - 0.037 13.9 2.2 0.041 13.8 0.8 1.5 1 1 0 1 1 1 0 FlxA-like protein AAA_19 PF13245.1 gi|21227192|ref|NP_633114.1| - 0.039 13.7 0.0 0.091 12.5 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain DUF3450 PF11932.3 gi|21227192|ref|NP_633114.1| - 0.039 13.2 2.8 0.061 12.5 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA PF00004.24 gi|21227192|ref|NP_633114.1| - 0.048 13.8 0.1 0.27 11.4 0.0 2.4 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) PAN_4 PF14295.1 gi|21227192|ref|NP_633114.1| - 0.055 13.1 0.1 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 PAN domain MobB PF03205.9 gi|21227192|ref|NP_633114.1| - 0.059 13.0 0.0 0.51 10.0 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|21227192|ref|NP_633114.1| - 0.064 13.5 0.2 0.19 12.0 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_23 PF13476.1 gi|21227192|ref|NP_633114.1| - 0.078 13.2 1.8 6.1 7.1 0.1 2.3 2 0 0 2 2 2 0 AAA domain FliD_C PF07195.7 gi|21227192|ref|NP_633114.1| - 0.086 12.1 1.8 0.37 10.0 1.3 1.9 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus ATP-synt_ab PF00006.20 gi|21227192|ref|NP_633114.1| - 0.089 12.2 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activat PF00158.21 gi|21227192|ref|NP_633114.1| - 0.094 12.1 0.0 0.32 10.4 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF972 PF06156.8 gi|21227192|ref|NP_633114.1| - 0.15 12.4 0.9 0.35 11.2 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF972) RNA_helicase PF00910.17 gi|21227192|ref|NP_633114.1| - 0.17 12.0 0.0 0.43 10.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase DUF4407 PF14362.1 gi|21227192|ref|NP_633114.1| - 0.19 10.6 4.3 0.27 10.1 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Med4 PF10018.4 gi|21227192|ref|NP_633114.1| - 0.24 10.8 4.3 0.38 10.1 3.0 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Atg14 PF10186.4 gi|21227192|ref|NP_633114.1| - 0.24 10.2 2.7 0.39 9.6 1.9 1.2 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Vac_Fusion PF02346.11 gi|21227192|ref|NP_633114.1| - 0.34 10.3 2.1 0.62 9.5 0.4 2.2 2 0 0 2 2 2 0 Chordopoxvirus fusion protein APG6 PF04111.7 gi|21227192|ref|NP_633114.1| - 0.98 8.3 5.0 1.6 7.7 3.5 1.2 1 0 0 1 1 1 0 Autophagy protein Apg6 KaiB PF07689.7 gi|21227193|ref|NP_633115.1| - 1.9e-30 104.1 0.0 2.8e-30 103.6 0.0 1.3 1 0 0 1 1 1 1 KaiB domain KaiB PF07689.7 gi|21227194|ref|NP_633116.1| - 1.7e-29 101.0 0.0 2.2e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 KaiB domain PAS_9 PF13426.1 gi|21227195|ref|NP_633117.1| - 7.8e-52 174.0 0.1 1.6e-18 67.0 0.0 5.3 5 0 0 5 5 5 4 PAS domain PAS PF00989.19 gi|21227195|ref|NP_633117.1| - 5.3e-38 129.2 0.1 3.9e-15 55.6 0.0 5.4 5 0 0 5 5 5 5 PAS fold HisKA_2 PF07568.7 gi|21227195|ref|NP_633117.1| - 2.5e-33 113.7 0.7 1e-32 111.8 0.5 2.1 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|21227195|ref|NP_633117.1| - 2.6e-32 110.7 0.0 6.5e-19 67.8 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.5 gi|21227195|ref|NP_633117.1| - 5.3e-32 110.1 0.0 1.9e-11 43.9 0.0 5.5 4 1 0 4 4 4 4 PAS fold PAS_8 PF13188.1 gi|21227195|ref|NP_633117.1| - 1.9e-23 81.4 0.0 3.3e-11 42.6 0.0 4.2 4 0 0 4 4 4 3 PAS domain PAS_7 PF12860.2 gi|21227195|ref|NP_633117.1| - 5.4e-13 48.9 0.0 0.0053 16.7 0.0 6.0 6 1 0 6 6 6 3 PAS fold PAS_10 PF13596.1 gi|21227195|ref|NP_633117.1| - 8.4e-11 42.0 0.1 0.00011 22.4 0.0 5.3 5 1 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|21227195|ref|NP_633117.1| - 3.4e-09 36.4 0.1 8.1e-09 35.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|21227195|ref|NP_633117.1| - 6.6e-08 32.4 0.0 0.0072 16.2 0.0 3.8 4 0 0 4 4 3 2 PAS domain HATPase_c_2 PF13581.1 gi|21227195|ref|NP_633117.1| - 0.00037 20.2 0.0 0.0013 18.5 0.0 2.0 2 0 0 2 2 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21227195|ref|NP_633117.1| - 0.00055 20.3 0.1 0.0021 18.4 0.1 2.0 1 0 0 1 1 1 1 HWE histidine kinase RolB_RolC PF02027.12 gi|21227195|ref|NP_633117.1| - 2 7.5 4.8 3.6 6.7 0.0 2.9 4 0 0 4 4 4 0 RolB/RolC glucosidase family TrmB PF01978.14 gi|21227196|ref|NP_633118.1| - 3.6e-05 23.3 0.1 5.7e-05 22.7 0.1 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|21227196|ref|NP_633118.1| - 0.00016 21.2 0.0 0.00024 20.7 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|21227196|ref|NP_633118.1| - 0.00094 18.8 0.3 0.0016 18.0 0.1 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|21227196|ref|NP_633118.1| - 0.00097 19.4 0.0 0.0015 18.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|21227196|ref|NP_633118.1| - 0.0019 18.0 0.5 0.0041 17.0 0.1 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Penicillinase_R PF03965.11 gi|21227196|ref|NP_633118.1| - 0.0023 18.0 0.2 0.0035 17.4 0.2 1.4 1 1 0 1 1 1 1 Penicillinase repressor TFIIE_alpha PF02002.12 gi|21227196|ref|NP_633118.1| - 0.0087 15.5 2.4 0.011 15.2 1.2 1.5 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_24 PF13412.1 gi|21227196|ref|NP_633118.1| - 0.01 15.1 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF2042 PF09743.4 gi|21227196|ref|NP_633118.1| - 0.019 14.2 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2042) Rio2_N PF09202.6 gi|21227196|ref|NP_633118.1| - 0.026 14.5 0.1 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Rio2, N-terminal Gp-FAR-1 PF05823.7 gi|21227196|ref|NP_633118.1| - 0.031 14.2 0.5 0.041 13.8 0.4 1.2 1 1 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) HTH_36 PF13730.1 gi|21227196|ref|NP_633118.1| - 0.052 13.6 0.3 0.18 11.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|21227196|ref|NP_633118.1| - 0.094 12.3 0.1 0.21 11.2 0.0 1.7 1 1 0 1 1 1 0 HTH domain Cullin_Nedd8 PF10557.4 gi|21227196|ref|NP_633118.1| - 0.11 12.3 0.9 0.19 11.5 0.1 1.8 2 0 0 2 2 2 0 Cullin protein neddylation domain HTH_Crp_2 PF13545.1 gi|21227196|ref|NP_633118.1| - 0.12 12.2 0.0 0.32 10.7 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain CtsR PF05848.6 gi|21227196|ref|NP_633118.1| - 0.33 10.8 2.5 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 Firmicute transcriptional repressor of class III stress genes (CtsR) Fer4_5 PF12801.2 gi|21227197|ref|NP_633119.1| - 7.8e-14 51.2 10.4 4.3e-10 39.2 0.6 3.6 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227197|ref|NP_633119.1| - 2.3e-09 37.5 11.4 0.00018 21.7 1.7 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21227197|ref|NP_633119.1| - 2.8e-09 36.1 23.4 4.7e-06 25.9 1.9 3.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21227197|ref|NP_633119.1| - 9.6e-08 31.9 12.2 0.00014 21.7 2.0 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227197|ref|NP_633119.1| - 8.5e-07 29.1 18.6 9e-05 22.6 12.6 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227197|ref|NP_633119.1| - 4.8e-06 26.2 24.4 5.3e-06 26.1 14.1 2.9 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227197|ref|NP_633119.1| - 7.5e-06 25.5 23.8 0.0011 18.7 3.6 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227197|ref|NP_633119.1| - 9e-06 25.4 17.8 0.00028 20.6 2.7 2.8 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227197|ref|NP_633119.1| - 6.3e-05 22.9 27.4 0.00074 19.6 3.6 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227197|ref|NP_633119.1| - 9.7e-05 22.7 22.5 0.0022 18.3 2.6 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227197|ref|NP_633119.1| - 0.00027 21.6 16.3 0.013 16.2 1.4 3.0 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|21227197|ref|NP_633119.1| - 0.00057 19.6 24.7 0.00082 19.1 1.6 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21227197|ref|NP_633119.1| - 0.00064 20.0 19.1 0.046 14.0 4.5 3.1 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227197|ref|NP_633119.1| - 0.0023 18.3 4.0 0.0023 18.3 2.8 4.5 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21227197|ref|NP_633119.1| - 0.085 13.2 16.8 0.45 10.9 2.1 2.7 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|21227197|ref|NP_633119.1| - 1.3 9.6 14.0 4.5 7.8 2.2 2.4 1 1 1 2 2 2 0 4Fe-4S single cluster domain Cpn60_TCP1 PF00118.19 gi|21227198|ref|NP_633120.1| - 1.5e-164 548.2 14.3 1.8e-164 547.9 9.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF473 PF04322.7 gi|21227199|ref|NP_633121.1| - 2.2e-43 146.6 0.3 2.5e-43 146.4 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) PAC2 PF09754.4 gi|21227200|ref|NP_633122.1| - 1.7e-52 178.4 0.3 2.1e-52 178.1 0.2 1.0 1 0 0 1 1 1 1 PAC2 family Pentapeptide_4 PF13599.1 gi|21227201|ref|NP_633123.1| - 0.052 13.3 2.2 0.12 12.2 1.5 1.7 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 gi|21227201|ref|NP_633123.1| - 7.4 6.5 8.9 1.2e+02 2.6 6.2 2.4 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) PK_C PF02887.11 gi|21227202|ref|NP_633124.1| - 3.1e-20 71.8 0.7 4.1e-20 71.4 0.5 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Asp_Glu_race PF01177.17 gi|21227202|ref|NP_633124.1| - 0.0012 18.7 0.1 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase DUF2855 PF11017.3 gi|21227202|ref|NP_633124.1| - 0.026 13.6 0.1 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) TGT PF01702.13 gi|21227203|ref|NP_633125.1| - 3.1e-53 180.5 0.0 3.9e-53 180.1 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase UbiA PF01040.13 gi|21227205|ref|NP_633127.1| - 9.1e-17 61.1 22.0 1.1e-16 60.8 15.3 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF3704 PF12488.3 gi|21227205|ref|NP_633127.1| - 0.49 10.0 0.2 0.49 10.0 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3704) DAO PF01266.19 gi|21227206|ref|NP_633128.1| - 3.2e-15 55.8 0.0 1.2e-09 37.5 0.0 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21227206|ref|NP_633128.1| - 1.9e-09 36.5 0.2 1.4e-07 30.3 0.1 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.14 gi|21227206|ref|NP_633128.1| - 2.3e-09 36.7 0.0 1.8e-05 23.9 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|21227206|ref|NP_633128.1| - 2.7e-06 26.7 0.0 7.9e-06 25.2 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|21227206|ref|NP_633128.1| - 6.5e-06 25.2 0.0 8.9e-06 24.8 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.12 gi|21227206|ref|NP_633128.1| - 6.9e-05 22.0 0.3 0.00014 21.0 0.0 1.7 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.9 gi|21227206|ref|NP_633128.1| - 7.5e-05 22.6 0.2 0.00018 21.4 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|21227206|ref|NP_633128.1| - 0.00027 20.8 0.0 0.00083 19.3 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|21227206|ref|NP_633128.1| - 0.00029 19.7 0.0 0.00068 18.5 0.0 1.7 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.22 gi|21227206|ref|NP_633128.1| - 0.00031 21.0 0.0 0.038 14.3 0.0 3.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21227206|ref|NP_633128.1| - 0.00059 19.9 0.0 0.0043 17.1 0.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21227206|ref|NP_633128.1| - 0.003 16.4 0.0 0.0085 14.9 0.0 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.9 gi|21227206|ref|NP_633128.1| - 0.042 12.4 0.0 2.6 6.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Radical_SAM PF04055.16 gi|21227207|ref|NP_633129.1| - 1.5e-19 70.8 0.0 2.1e-19 70.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.1 gi|21227207|ref|NP_633129.1| - 6.5e-06 26.4 1.4 1.3e-05 25.4 0.4 1.9 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|21227207|ref|NP_633129.1| - 2.6e-05 24.3 0.0 4.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227207|ref|NP_633129.1| - 0.013 15.5 0.0 0.026 14.5 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain Costars PF14705.1 gi|21227208|ref|NP_633130.1| - 0.1 12.5 3.6 0.52 10.3 0.2 2.9 2 1 0 2 2 2 0 Costars DUF1353 PF07087.6 gi|21227208|ref|NP_633130.1| - 0.66 9.4 2.5 0.82 9.1 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1353) HAD PF12710.2 gi|21227209|ref|NP_633131.1| - 6.8e-17 62.2 0.0 8.6e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21227209|ref|NP_633131.1| - 6.2e-16 59.4 1.4 2.8e-14 54.0 1.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227209|ref|NP_633131.1| - 8.6e-11 41.8 0.0 7.2e-09 35.5 0.0 2.6 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|21227209|ref|NP_633131.1| - 1e-08 35.5 0.0 4.3e-08 33.5 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.7 gi|21227209|ref|NP_633131.1| - 3.2e-06 26.4 0.0 0.0091 15.1 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase S6PP PF05116.8 gi|21227209|ref|NP_633131.1| - 0.00033 20.0 0.1 0.039 13.2 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase DUF373 PF04123.8 gi|21227209|ref|NP_633131.1| - 0.026 13.5 0.0 0.04 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF705 PF05152.7 gi|21227209|ref|NP_633131.1| - 0.044 12.7 0.1 0.067 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Ribosomal_S24e PF01282.14 gi|21227209|ref|NP_633131.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S24e MTD PF01993.13 gi|21227210|ref|NP_633132.1| - 8.5e-96 320.2 2.7 9.6e-96 320.0 1.9 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase CheD PF03975.8 gi|21227210|ref|NP_633132.1| - 0.039 13.6 0.1 0.083 12.6 0.1 1.5 1 0 0 1 1 1 0 CheD chemotactic sensory transduction DUF2111 PF09884.4 gi|21227211|ref|NP_633133.1| - 1.5e-35 120.8 0.2 2.1e-35 120.3 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) dTMP_synthase PF02593.9 gi|21227212|ref|NP_633134.1| - 4.3e-69 232.1 0.0 4.9e-69 232.0 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase DapB_N PF01113.15 gi|21227212|ref|NP_633134.1| - 0.0011 18.8 0.0 0.0042 16.9 0.0 1.9 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Thymidylate_kin PF02223.12 gi|21227213|ref|NP_633135.1| - 1.6e-45 154.7 0.0 1.9e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_18 PF13238.1 gi|21227213|ref|NP_633135.1| - 5.8e-06 26.6 0.0 1.7e-05 25.1 0.0 1.7 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|21227213|ref|NP_633135.1| - 7.4e-06 25.8 0.0 1.6e-05 24.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|21227213|ref|NP_633135.1| - 1.5e-05 25.0 0.0 3.8e-05 23.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21227213|ref|NP_633135.1| - 0.00025 21.8 0.1 0.0019 19.0 0.1 2.3 1 1 0 1 1 1 1 AAA domain CPT PF07931.7 gi|21227213|ref|NP_633135.1| - 0.015 14.9 0.1 0.11 12.0 0.1 2.3 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_22 PF13401.1 gi|21227213|ref|NP_633135.1| - 0.024 14.7 0.0 0.061 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|21227213|ref|NP_633135.1| - 0.041 12.9 0.1 0.37 9.8 0.1 2.3 2 1 0 2 2 2 0 Zeta toxin NB-ARC PF00931.17 gi|21227213|ref|NP_633135.1| - 0.064 12.1 0.0 0.084 11.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Cytidylate_kin2 PF13189.1 gi|21227213|ref|NP_633135.1| - 0.12 12.2 0.0 0.21 11.4 0.0 1.6 1 1 0 1 1 1 0 Cytidylate kinase-like family DUF3107 PF11305.3 gi|21227213|ref|NP_633135.1| - 0.13 12.1 0.2 7.1 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) His_biosynth PF00977.16 gi|21227215|ref|NP_633137.1| - 4.3e-39 134.1 0.0 4.9e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PRAI PF00697.17 gi|21227215|ref|NP_633137.1| - 0.0095 15.5 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FMN_dh PF01070.13 gi|21227215|ref|NP_633137.1| - 0.025 13.4 1.1 0.61 8.8 0.1 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase DUF556 PF04476.8 gi|21227216|ref|NP_633138.1| - 2.3e-98 328.1 0.8 2.5e-98 327.9 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF556) PIG-L PF02585.12 gi|21227216|ref|NP_633138.1| - 0.064 13.7 0.0 9.7 6.7 0.0 2.1 1 1 1 2 2 2 0 GlcNAc-PI de-N-acetylase DUF457 PF04307.9 gi|21227217|ref|NP_633139.1| - 6.1e-19 67.8 6.1 7.2e-19 67.6 4.2 1.1 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) MscS_TM PF12794.2 gi|21227217|ref|NP_633139.1| - 0.048 12.2 0.0 0.087 11.4 0.0 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF2665 PF11654.3 gi|21227217|ref|NP_633139.1| - 3 7.4 5.8 0.43 10.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2665) DUF373 PF04123.8 gi|21227218|ref|NP_633140.1| - 0.24 10.3 4.5 0.56 9.1 3.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF3473 PF11959.3 gi|21227219|ref|NP_633141.1| - 1.3e-23 82.8 0.0 2.8e-23 81.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.16 gi|21227219|ref|NP_633141.1| - 3.3e-20 71.9 0.0 4.6e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2540 PF10802.3 gi|21227219|ref|NP_633141.1| - 0.023 14.3 0.1 7.7 6.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) Disaggr_repeat PF06848.6 gi|21227220|ref|NP_633142.1| - 3e-96 320.0 3.0 2.4e-95 317.1 3.0 1.8 2 0 0 2 2 2 1 Disaggregatase related repeat Pectate_lyase_3 PF12708.2 gi|21227220|ref|NP_633142.1| - 4.5e-13 49.8 9.0 4.5e-13 49.8 6.3 2.4 2 0 0 2 2 2 1 Pectate lyase superfamily protein Beta_helix PF13229.1 gi|21227220|ref|NP_633142.1| - 4.4e-11 42.7 50.3 1.4e-07 31.3 11.0 3.4 2 1 1 3 3 3 2 Right handed beta helix region TGFb_propeptide PF00688.13 gi|21227220|ref|NP_633142.1| - 0.0022 17.3 0.0 0.094 11.9 0.0 2.3 2 0 0 2 2 2 1 TGF-beta propeptide Phage_integrase PF00589.17 gi|21227220|ref|NP_633142.1| - 0.048 13.3 0.0 1.2 8.8 0.0 2.3 2 0 0 2 2 2 0 Phage integrase family Disaggr_assoc PF08480.5 gi|21227221|ref|NP_633143.1| - 3.3e-99 330.2 13.4 3.3e-99 330.2 9.3 2.7 3 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|21227221|ref|NP_633143.1| - 1.1e-15 57.7 39.3 5.2e-12 45.8 15.5 3.5 1 1 2 3 3 3 2 Right handed beta helix region Disaggr_repeat PF06848.6 gi|21227222|ref|NP_633144.1| - 4.1e-91 303.3 3.2 7.9e-91 302.4 2.2 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|21227222|ref|NP_633144.1| - 3.7e-75 251.7 3.7 3.7e-75 251.7 2.6 2.7 2 1 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.1 gi|21227222|ref|NP_633144.1| - 2.5e-23 82.5 67.8 8.7e-13 48.3 13.3 3.1 1 1 2 3 3 3 3 Right handed beta helix region CarboxypepD_reg PF13620.1 gi|21227222|ref|NP_633144.1| - 0.026 14.5 0.1 0.064 13.3 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Glycos_transf_2 PF00535.21 gi|21227223|ref|NP_633145.1| - 1.2e-29 103.1 0.0 7.9e-24 84.2 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227223|ref|NP_633145.1| - 5.4e-07 29.6 0.0 2.5e-05 24.1 0.0 2.2 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227223|ref|NP_633145.1| - 3.2e-06 27.3 0.0 0.00066 19.9 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 GFO_IDH_MocA PF01408.17 gi|21227224|ref|NP_633146.1| - 3.2e-30 105.0 0.0 5.1e-30 104.4 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|21227224|ref|NP_633146.1| - 8.8e-07 28.7 0.0 2.2e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.19 gi|21227224|ref|NP_633146.1| - 1.5e-05 25.2 0.0 2.7e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|21227224|ref|NP_633146.1| - 0.02 14.7 0.1 0.055 13.3 0.0 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus F420_oxidored PF03807.12 gi|21227224|ref|NP_633146.1| - 0.071 13.5 0.0 0.19 12.1 0.0 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.9 gi|21227224|ref|NP_633146.1| - 0.076 12.3 0.0 0.2 11.0 0.0 1.6 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Gp_dh_N PF00044.19 gi|21227224|ref|NP_633146.1| - 0.1 12.5 0.1 0.21 11.5 0.0 1.6 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ESSS PF10183.4 gi|21227225|ref|NP_633147.1| - 0.99 9.8 1.9 2.2 8.7 0.0 2.5 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Polysacc_synt_3 PF13440.1 gi|21227226|ref|NP_633148.1| - 3.4e-22 79.1 12.1 3.4e-22 79.1 8.4 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.12 gi|21227226|ref|NP_633148.1| - 1.6e-20 73.5 23.4 1.6e-20 73.5 16.2 2.4 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Acetyltransf_6 PF13480.1 gi|21227227|ref|NP_633149.1| - 2.8e-14 53.2 0.0 2.1e-13 50.4 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.11 gi|21227227|ref|NP_633149.1| - 3e-05 22.8 0.0 0.16 10.6 0.0 2.9 2 1 1 3 3 3 2 FemAB family DUF482 PF04339.7 gi|21227227|ref|NP_633149.1| - 0.053 12.3 0.0 0.096 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF482 Glycos_transf_1 PF00534.15 gi|21227228|ref|NP_633150.1| - 4.6e-34 117.3 0.0 9.9e-34 116.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227228|ref|NP_633150.1| - 1.2e-23 83.7 0.1 1.9e-23 83.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227228|ref|NP_633150.1| - 1.1e-12 48.0 0.0 2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227228|ref|NP_633150.1| - 5.3e-11 42.5 0.0 8.2e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21227228|ref|NP_633150.1| - 2.5e-10 40.7 0.0 3.6e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|21227228|ref|NP_633150.1| - 2.9e-06 27.1 0.0 1.3e-05 25.0 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|21227229|ref|NP_633151.1| - 1.8e-17 63.5 0.0 2.7e-16 59.7 0.0 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227229|ref|NP_633151.1| - 3.3e-08 33.6 0.0 9.2e-07 28.8 0.0 2.1 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21227229|ref|NP_633151.1| - 0.001 18.7 0.0 0.01 15.5 0.0 2.1 1 1 1 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|21227229|ref|NP_633151.1| - 0.0066 16.7 0.0 0.02 15.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 2 Polysacc_deac_1 PF01522.16 gi|21227230|ref|NP_633152.1| - 0.015 14.9 0.0 0.074 12.6 0.0 2.0 1 1 0 1 1 1 0 Polysaccharide deacetylase DUF354 PF04007.7 gi|21227231|ref|NP_633153.1| - 5.3e-39 134.0 0.0 6.4e-39 133.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.1 gi|21227231|ref|NP_633153.1| - 0.0034 17.2 1.5 0.013 15.3 0.3 2.1 2 0 0 2 2 2 1 Glycosyl transferase 4-like BRCA2 PF00634.13 gi|21227231|ref|NP_633153.1| - 0.05 12.9 0.1 0.15 11.3 0.1 1.8 1 0 0 1 1 1 0 BRCA2 repeat HTH_psq PF05225.11 gi|21227231|ref|NP_633153.1| - 0.059 12.9 0.0 0.16 11.5 0.0 1.7 1 0 0 1 1 1 0 helix-turn-helix, Psq domain UDPG_MGDP_dh_N PF03721.9 gi|21227234|ref|NP_633156.1| - 1.8e-57 193.7 0.8 2.6e-57 193.1 0.2 1.5 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|21227234|ref|NP_633156.1| - 1.5e-35 121.2 0.3 5.1e-35 119.5 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|21227234|ref|NP_633156.1| - 4.5e-31 107.1 0.2 1.3e-30 105.6 0.1 1.9 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.12 gi|21227234|ref|NP_633156.1| - 0.00065 20.0 0.2 0.59 10.5 0.0 3.6 3 1 1 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|21227234|ref|NP_633156.1| - 0.0012 18.5 0.3 0.011 15.4 0.0 2.7 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_11 PF14833.1 gi|21227234|ref|NP_633156.1| - 0.0026 17.8 0.2 0.0076 16.3 0.1 1.9 1 1 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NAD_binding_2 PF03446.10 gi|21227234|ref|NP_633156.1| - 0.0047 16.7 0.1 0.82 9.4 0.0 2.6 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|21227234|ref|NP_633156.1| - 0.04 13.5 0.0 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NTP_transferase PF00483.18 gi|21227235|ref|NP_633157.1| - 3.2e-30 105.2 0.0 4.4e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|21227235|ref|NP_633157.1| - 5.5e-09 36.2 0.0 1.1e-08 35.3 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.21 gi|21227235|ref|NP_633157.1| - 0.00073 19.2 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 IspD PF01128.14 gi|21227235|ref|NP_633157.1| - 0.01 15.3 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Smr PF01713.16 gi|21227235|ref|NP_633157.1| - 0.014 15.6 0.0 0.066 13.4 0.0 2.0 2 0 0 2 2 2 0 Smr domain CTP_transf_3 PF02348.14 gi|21227235|ref|NP_633157.1| - 0.05 13.2 0.0 0.083 12.5 0.0 1.4 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.16 gi|21227236|ref|NP_633158.1| - 1.6e-49 168.4 0.0 1.9e-49 168.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|21227236|ref|NP_633158.1| - 1e-21 76.8 0.0 1.3e-21 76.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|21227236|ref|NP_633158.1| - 6.7e-20 71.1 0.0 9.8e-19 67.3 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|21227236|ref|NP_633158.1| - 1.2e-19 70.3 0.0 1.4e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|21227236|ref|NP_633158.1| - 1.2e-17 63.6 0.0 1.6e-15 56.7 0.0 2.3 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.1 gi|21227236|ref|NP_633158.1| - 1.7e-11 44.4 0.0 2.5e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|21227236|ref|NP_633158.1| - 3.2e-07 30.4 0.0 1.1e-06 28.6 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|21227236|ref|NP_633158.1| - 9.6e-05 21.7 0.0 0.0028 16.9 0.0 2.3 2 1 0 2 2 2 1 NmrA-like family Saccharop_dh PF03435.13 gi|21227236|ref|NP_633158.1| - 0.0036 16.3 0.0 0.0053 15.7 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase TrkA_N PF02254.13 gi|21227236|ref|NP_633158.1| - 0.008 16.1 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain KR PF08659.5 gi|21227236|ref|NP_633158.1| - 0.016 14.8 0.0 0.031 13.9 0.0 1.4 1 1 0 1 1 1 0 KR domain NAD_binding_7 PF13241.1 gi|21227236|ref|NP_633158.1| - 0.025 14.8 0.0 0.05 13.8 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Polysacc_synt PF01943.12 gi|21227237|ref|NP_633159.1| - 1.7e-27 96.3 34.4 1.7e-27 96.3 23.8 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21227237|ref|NP_633159.1| - 2e-23 83.1 28.2 2e-23 83.1 19.5 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|21227237|ref|NP_633159.1| - 3.3e-18 65.8 20.7 3.3e-18 65.8 14.3 3.9 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|21227237|ref|NP_633159.1| - 4.4e-08 31.9 43.8 4.4e-08 31.9 30.4 1.7 1 1 1 2 2 2 1 MviN-like protein Disaggr_repeat PF06848.6 gi|21227238|ref|NP_633160.1| - 6.6e-288 944.7 35.0 3.4e-98 326.4 4.5 3.3 3 0 0 3 3 3 3 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|21227238|ref|NP_633160.1| - 2.4e-92 307.8 11.9 2.4e-92 307.8 8.2 3.4 3 1 0 3 3 3 1 Disaggregatase related TGFb_propeptide PF00688.13 gi|21227238|ref|NP_633160.1| - 4.7e-13 48.9 0.0 0.52 9.5 0.0 6.2 6 0 0 6 6 6 5 TGF-beta propeptide Beta_helix PF13229.1 gi|21227238|ref|NP_633160.1| - 1.7e-11 44.1 48.1 3.6e-07 30.0 11.8 3.9 1 1 1 2 2 2 2 Right handed beta helix region DUF3940 PF13076.1 gi|21227238|ref|NP_633160.1| - 0.053 13.0 3.3 27 4.4 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3940) JHBP PF06585.6 gi|21227238|ref|NP_633160.1| - 0.071 11.9 0.4 0.25 10.1 0.1 1.9 2 0 0 2 2 2 0 Haemolymph juvenile hormone binding protein (JHBP) p31comet PF06581.7 gi|21227238|ref|NP_633160.1| - 0.15 10.8 0.0 29 3.4 0.0 3.3 4 0 0 4 4 4 0 Mad1 and Cdc20-bound-Mad2 binding Glycos_transf_1 PF00534.15 gi|21227239|ref|NP_633161.1| - 1.5e-27 96.0 0.0 5.3e-27 94.3 0.0 2.0 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227239|ref|NP_633161.1| - 3.5e-25 88.7 0.0 9e-25 87.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227239|ref|NP_633161.1| - 5.2e-12 45.8 0.0 1.7e-11 44.2 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227239|ref|NP_633161.1| - 1.4e-10 41.2 0.0 2.6e-10 40.3 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21227239|ref|NP_633161.1| - 2.9e-08 34.0 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|21227240|ref|NP_633162.1| - 1.8e-45 154.4 0.1 3.1e-45 153.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227240|ref|NP_633162.1| - 1.4e-17 64.1 0.0 2.2e-17 63.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227240|ref|NP_633162.1| - 2e-12 47.2 0.0 3.9e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227240|ref|NP_633162.1| - 2.8e-12 46.6 0.0 9.1e-12 45.0 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21227240|ref|NP_633162.1| - 1.1e-11 45.1 0.0 1.7e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|21227240|ref|NP_633162.1| - 0.00066 19.5 0.1 0.013 15.3 0.1 2.5 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|21227241|ref|NP_633163.1| - 1.7e-28 99.3 0.0 2.6e-28 98.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227241|ref|NP_633163.1| - 2e-17 63.7 0.0 4.3e-17 62.6 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|21227241|ref|NP_633163.1| - 7.9e-14 51.4 0.0 1.5e-13 50.5 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21227241|ref|NP_633163.1| - 9.8e-10 38.4 0.0 1.9e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|21227241|ref|NP_633163.1| - 0.00018 21.7 0.0 0.00042 20.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_5 PF13712.1 gi|21227241|ref|NP_633163.1| - 0.016 14.4 0.1 0.81 8.8 0.0 2.4 1 1 0 1 1 1 0 Glycosyltransferase like family Anp1 PF03452.9 gi|21227241|ref|NP_633163.1| - 0.055 12.6 0.0 0.76 8.8 0.0 2.0 1 1 1 2 2 2 0 Anp1 GNT-I PF03071.10 gi|21227241|ref|NP_633163.1| - 0.062 11.8 0.0 0.083 11.4 0.0 1.1 1 0 0 1 1 1 0 GNT-I family Glycos_transf_2 PF00535.21 gi|21227242|ref|NP_633164.1| - 1.3e-25 90.0 0.0 2.1e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227242|ref|NP_633164.1| - 7.4e-07 29.1 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227242|ref|NP_633164.1| - 9.1e-06 25.9 0.0 0.00019 21.6 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 DUF373 PF04123.8 gi|21227242|ref|NP_633164.1| - 0.098 11.6 8.3 0.018 14.0 1.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Glycos_transf_2 PF00535.21 gi|21227243|ref|NP_633165.1| - 6.4e-37 126.8 0.3 9.6e-37 126.2 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227243|ref|NP_633165.1| - 8.6e-16 58.4 0.0 1.5e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|21227243|ref|NP_633165.1| - 3.6e-13 49.2 1.0 5.9e-13 48.5 0.7 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227243|ref|NP_633165.1| - 0.011 16.0 0.0 0.025 14.8 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|21227244|ref|NP_633166.1| - 4.8e-49 166.0 0.0 1e-48 164.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227244|ref|NP_633166.1| - 9.2e-25 87.3 0.0 2.6e-24 85.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227244|ref|NP_633166.1| - 7.8e-22 77.8 0.1 1.1e-21 77.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21227244|ref|NP_633166.1| - 1.6e-17 64.0 0.0 2.2e-17 63.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|21227244|ref|NP_633166.1| - 2.5e-16 59.6 0.0 5.2e-16 58.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21227244|ref|NP_633166.1| - 3.7e-10 39.7 2.8 7.2e-10 38.8 1.4 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.6 gi|21227244|ref|NP_633166.1| - 2.4e-07 30.4 0.2 1.4e-06 28.0 0.0 2.3 2 1 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.15 gi|21227245|ref|NP_633167.1| - 1.1e-31 109.6 0.0 2.9e-31 108.1 0.0 1.7 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227245|ref|NP_633167.1| - 3.8e-24 85.3 0.0 5.9e-24 84.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227245|ref|NP_633167.1| - 1e-13 51.3 0.0 3.7e-13 49.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227245|ref|NP_633167.1| - 1.8e-11 44.0 0.0 3.5e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|21227245|ref|NP_633167.1| - 2.3e-06 27.5 0.4 3.8e-06 26.7 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|21227245|ref|NP_633167.1| - 0.00075 19.6 0.0 0.0013 18.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Disaggr_repeat PF06848.6 gi|21227246|ref|NP_633168.1| - 3.4e-284 932.6 37.9 4.9e-96 319.4 4.6 3.4 3 0 0 3 3 3 3 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|21227246|ref|NP_633168.1| - 2.5e-87 291.4 12.7 2.5e-87 291.4 8.8 3.4 3 0 0 3 3 3 1 Disaggregatase related TGFb_propeptide PF00688.13 gi|21227246|ref|NP_633168.1| - 6.2e-14 51.8 0.0 0.32 10.2 0.0 6.1 6 0 0 6 6 6 6 TGF-beta propeptide Disaggr_assoc PF08480.5 gi|21227247|ref|NP_633169.1| - 1.2e-101 338.2 7.0 1.2e-101 338.2 4.9 3.3 2 1 2 4 4 4 1 Disaggregatase related Beta_helix PF13229.1 gi|21227247|ref|NP_633169.1| - 3.8e-15 56.0 46.3 2.7e-11 43.4 17.1 3.4 1 1 1 2 2 2 2 Right handed beta helix region DUF1565 PF07602.6 gi|21227247|ref|NP_633169.1| - 0.0029 16.7 17.4 0.39 9.8 1.0 3.3 1 1 2 3 3 3 2 Protein of unknown function (DUF1565) YqfD PF06898.6 gi|21227248|ref|NP_633170.1| - 0.23 10.1 0.7 0.5 9.0 0.5 1.5 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Glycos_transf_2 PF00535.21 gi|21227249|ref|NP_633171.1| - 1.3e-25 90.0 0.0 2.1e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227249|ref|NP_633171.1| - 7.2e-07 29.2 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227249|ref|NP_633171.1| - 9.2e-06 25.8 0.0 0.00019 21.6 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 DUF373 PF04123.8 gi|21227249|ref|NP_633171.1| - 0.012 14.6 1.9 0.012 14.6 1.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.6 gi|21227250|ref|NP_633172.1| - 4.2e-97 324.7 1.5 4.7e-97 324.5 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CopD PF05425.8 gi|21227250|ref|NP_633172.1| - 1.4 9.2 7.5 4 7.6 3.9 2.5 1 1 0 1 1 1 0 Copper resistance protein D Abi PF02517.11 gi|21227251|ref|NP_633173.1| - 1.9e-17 63.1 9.8 1.9e-17 63.1 6.8 2.8 2 1 0 2 2 2 1 CAAX protease self-immunity Vma12 PF11712.3 gi|21227251|ref|NP_633173.1| - 7.7 6.2 11.2 3 7.5 0.0 3.0 3 0 0 3 3 3 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF3675 PF12428.3 gi|21227252|ref|NP_633174.1| - 0.24 11.6 1.3 0.25 11.6 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Hexapep PF00132.19 gi|21227253|ref|NP_633175.1| - 1e-34 116.4 24.1 9.5e-09 34.3 1.9 5.2 5 0 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21227253|ref|NP_633175.1| - 8.1e-14 50.8 24.9 4.5e-06 26.1 3.7 5.2 5 0 0 5 5 5 4 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.8 gi|21227253|ref|NP_633175.1| - 0.07 13.1 1.5 0.25 11.3 0.4 2.5 2 1 0 2 2 2 0 Polymer-forming cytoskeletal DegT_DnrJ_EryC1 PF01041.12 gi|21227254|ref|NP_633176.1| - 8.5e-134 446.1 0.1 9.6e-134 445.9 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|21227254|ref|NP_633176.1| - 4.1e-10 39.2 0.4 9.8e-10 38.0 0.3 1.6 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|21227254|ref|NP_633176.1| - 1.2e-06 27.0 0.1 3.5e-06 25.5 0.1 1.7 2 1 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|21227254|ref|NP_633176.1| - 4.7e-06 25.5 0.1 0.0009 18.0 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V SelA PF03841.8 gi|21227254|ref|NP_633176.1| - 0.11 11.2 0.1 0.53 8.9 0.0 1.9 1 1 0 1 1 1 0 L-seryl-tRNA selenium transferase GFO_IDH_MocA PF01408.17 gi|21227255|ref|NP_633177.1| - 4.4e-33 114.3 1.3 7.6e-33 113.5 0.9 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|21227255|ref|NP_633177.1| - 3.8e-07 29.9 0.0 7.8e-07 28.8 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain OCD_Mu_crystall PF02423.10 gi|21227255|ref|NP_633177.1| - 1.9e-05 23.6 0.9 4.4e-05 22.3 0.3 1.8 2 0 0 2 2 2 1 Ornithine cyclodeaminase/mu-crystallin family NAD_binding_2 PF03446.10 gi|21227255|ref|NP_633177.1| - 2.2e-05 24.3 1.4 4.7e-05 23.2 1.0 1.6 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Semialdhyde_dh PF01118.19 gi|21227255|ref|NP_633177.1| - 5.3e-05 23.5 0.7 0.0001 22.6 0.3 1.6 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|21227255|ref|NP_633177.1| - 0.00051 20.4 1.3 0.0011 19.3 0.4 1.9 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.15 gi|21227255|ref|NP_633177.1| - 0.0022 17.9 3.2 0.064 13.1 2.2 2.4 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.14 gi|21227255|ref|NP_633177.1| - 0.0034 16.5 0.5 0.0081 15.3 0.1 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.14 gi|21227255|ref|NP_633177.1| - 0.01 16.3 0.8 0.031 14.7 0.6 1.9 1 0 0 1 1 1 1 CoA binding domain NAD_binding_3 PF03447.11 gi|21227255|ref|NP_633177.1| - 0.014 15.7 0.9 0.033 14.5 0.6 1.6 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Gp_dh_N PF00044.19 gi|21227255|ref|NP_633177.1| - 0.032 14.2 0.1 0.05 13.5 0.1 1.5 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IlvN PF07991.7 gi|21227255|ref|NP_633177.1| - 0.049 12.9 1.0 0.12 11.7 0.7 1.6 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain UDPG_MGDP_dh_N PF03721.9 gi|21227256|ref|NP_633178.1| - 3e-36 124.5 0.0 6.8e-36 123.3 0.0 1.5 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.10 gi|21227256|ref|NP_633178.1| - 3.9e-21 75.1 0.0 1.2e-20 73.5 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.14 gi|21227256|ref|NP_633178.1| - 2.2e-18 66.2 0.0 7.1e-18 64.6 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain THF_DHG_CYH_C PF02882.14 gi|21227256|ref|NP_633178.1| - 0.018 14.1 1.2 2.2 7.3 0.1 2.8 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_Gly3P_dh_N PF01210.18 gi|21227256|ref|NP_633178.1| - 0.037 13.7 0.0 5.7 6.6 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.14 gi|21227256|ref|NP_633178.1| - 0.047 12.8 0.1 7.3 5.7 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_deac_1 PF01522.16 gi|21227257|ref|NP_633179.1| - 6.7e-05 22.5 0.0 0.00025 20.6 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide deacetylase Polysacc_synt PF01943.12 gi|21227258|ref|NP_633180.1| - 3.4e-13 49.4 10.6 3.4e-13 49.4 7.3 3.3 2 2 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21227258|ref|NP_633180.1| - 3.6e-08 33.1 15.0 3.6e-08 33.1 10.4 3.1 2 2 0 2 2 2 1 Polysaccharide biosynthesis protein Y_Y_Y PF07495.8 gi|21227259|ref|NP_633181.1| - 0.00041 20.0 1.4 0.023 14.4 0.0 3.1 3 0 0 3 3 3 1 Y_Y_Y domain BatD PF13584.1 gi|21227259|ref|NP_633181.1| - 0.0039 15.8 0.1 0.025 13.1 0.0 1.9 1 1 1 2 2 2 1 Oxygen tolerance LEA_2 PF03168.8 gi|21227259|ref|NP_633181.1| - 0.017 15.4 0.1 0.12 12.7 0.0 2.2 1 1 1 2 2 2 0 Late embryogenesis abundant protein TIG PF01833.19 gi|21227259|ref|NP_633181.1| - 0.022 14.7 0.1 0.22 11.5 0.0 2.3 2 1 0 2 2 2 0 IPT/TIG domain Ribosomal_L31 PF01197.13 gi|21227260|ref|NP_633182.1| - 0.053 13.5 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 Ribosomal protein L31 Acylphosphatase PF00708.13 gi|21227261|ref|NP_633183.1| - 2.6e-23 81.9 0.1 4.2e-23 81.2 0.1 1.3 1 0 0 1 1 1 1 Acylphosphatase LPP PF04728.8 gi|21227261|ref|NP_633183.1| - 0.046 13.5 0.0 4.5 7.1 0.0 2.7 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DUF1115 PF06544.7 gi|21227261|ref|NP_633183.1| - 0.059 13.0 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1115) BLOC1_2 PF10046.4 gi|21227261|ref|NP_633183.1| - 0.087 12.9 0.0 0.44 10.7 0.0 2.3 3 0 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HSBP1 PF06825.7 gi|21227261|ref|NP_633183.1| - 0.092 12.3 3.0 6.7 6.3 0.6 4.0 2 1 1 3 3 3 0 Heat shock factor binding protein 1 DUF2884 PF11101.3 gi|21227261|ref|NP_633183.1| - 0.15 11.4 0.3 2.3 7.5 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2884) DUF552 PF04472.7 gi|21227261|ref|NP_633183.1| - 3.1 7.7 5.5 14 5.6 0.1 3.5 2 1 2 4 4 4 0 Protein of unknown function (DUF552) NTP_transf_2 PF01909.18 gi|21227262|ref|NP_633184.1| - 7.5e-10 39.0 0.7 2e-09 37.6 0.5 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|21227262|ref|NP_633184.1| - 0.026 14.1 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF86 PF01934.12 gi|21227263|ref|NP_633185.1| - 3.8e-25 87.8 0.1 4.4e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Epimerase PF01370.16 gi|21227264|ref|NP_633186.1| - 1.1e-63 214.8 0.1 1.7e-63 214.2 0.0 1.3 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|21227264|ref|NP_633186.1| - 9.7e-24 83.5 0.0 1.3e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|21227264|ref|NP_633186.1| - 1.8e-18 66.4 0.1 9.3e-18 64.1 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|21227264|ref|NP_633186.1| - 1.6e-16 60.0 0.0 2e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|21227264|ref|NP_633186.1| - 4.8e-10 38.7 0.0 5.5e-06 25.5 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.1 gi|21227264|ref|NP_633186.1| - 6.7e-10 39.2 0.2 1.6e-09 38.0 0.1 1.6 1 1 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|21227264|ref|NP_633186.1| - 5.1e-09 36.2 0.0 9.3e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.8 gi|21227264|ref|NP_633186.1| - 6e-07 28.9 0.0 8e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family KR PF08659.5 gi|21227264|ref|NP_633186.1| - 0.0015 18.2 0.0 0.0026 17.4 0.0 1.5 1 1 0 1 1 1 1 KR domain ApbA PF02558.11 gi|21227264|ref|NP_633186.1| - 0.0017 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|21227264|ref|NP_633186.1| - 0.0044 17.4 0.0 0.0084 16.5 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.13 gi|21227264|ref|NP_633186.1| - 0.0068 16.0 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|21227264|ref|NP_633186.1| - 0.0079 15.6 0.1 0.023 14.0 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.13 gi|21227264|ref|NP_633186.1| - 0.014 15.3 0.2 0.033 14.1 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain DapB_N PF01113.15 gi|21227264|ref|NP_633186.1| - 0.022 14.6 0.2 0.044 13.7 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pyr_redox PF00070.22 gi|21227264|ref|NP_633186.1| - 0.027 14.8 0.3 0.11 12.9 0.0 2.2 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.9 gi|21227264|ref|NP_633186.1| - 0.057 13.2 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|21227264|ref|NP_633186.1| - 0.074 11.9 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|21227264|ref|NP_633186.1| - 0.09 12.8 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain NTP_transf_2 PF01909.18 gi|21227265|ref|NP_633187.1| - 7.7e-14 51.7 0.1 9e-14 51.5 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21227265|ref|NP_633187.1| - 0.035 14.1 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm Adenyl_cycl_N PF12633.2 gi|21227265|ref|NP_633187.1| - 0.12 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain DUF86 PF01934.12 gi|21227266|ref|NP_633188.1| - 4.9e-26 90.7 0.2 5.8e-26 90.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Glycos_transf_2 PF00535.21 gi|21227267|ref|NP_633189.1| - 3.3e-19 69.1 0.1 7.6e-19 68.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227267|ref|NP_633189.1| - 4.2e-06 26.7 0.1 5.3e-06 26.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|21227267|ref|NP_633189.1| - 0.0046 16.2 0.1 0.012 14.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|21227267|ref|NP_633189.1| - 0.012 15.9 0.0 0.029 14.7 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase family 2 dTDP_sugar_isom PF00908.12 gi|21227268|ref|NP_633190.1| - 1.1e-69 233.3 0.0 1.2e-69 233.1 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Epimerase PF01370.16 gi|21227269|ref|NP_633191.1| - 1e-67 228.0 0.0 1.4e-67 227.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|21227269|ref|NP_633191.1| - 4.4e-24 84.6 0.0 6e-24 84.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|21227269|ref|NP_633191.1| - 4.8e-23 81.4 0.0 8e-22 77.4 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|21227269|ref|NP_633191.1| - 8.1e-19 67.5 0.0 9.5e-18 64.0 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.12 gi|21227269|ref|NP_633191.1| - 2.3e-18 66.0 0.0 3e-18 65.7 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|21227269|ref|NP_633191.1| - 1e-05 25.6 0.0 1.5e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NmrA PF05368.8 gi|21227269|ref|NP_633191.1| - 0.00095 18.4 0.0 0.0014 17.9 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family adh_short PF00106.20 gi|21227269|ref|NP_633191.1| - 0.014 15.3 0.0 0.043 13.7 0.0 1.8 1 1 0 1 1 1 0 short chain dehydrogenase RmlD_sub_bind PF04321.12 gi|21227270|ref|NP_633192.1| - 4.8e-91 304.6 0.0 5.8e-91 304.3 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|21227270|ref|NP_633192.1| - 1.1e-16 60.9 0.0 8.3e-16 58.1 0.0 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.10 gi|21227270|ref|NP_633192.1| - 2.1e-10 39.9 0.5 2.8e-09 36.2 0.0 2.8 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.7 gi|21227270|ref|NP_633192.1| - 9.5e-07 27.9 0.0 1.4e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.14 gi|21227270|ref|NP_633192.1| - 3.6e-06 25.8 0.4 2.3e-05 23.2 0.1 2.1 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NTP_transferase PF00483.18 gi|21227271|ref|NP_633193.1| - 1.4e-23 83.4 0.0 1.5e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|21227271|ref|NP_633193.1| - 1.6e-09 38.0 0.0 1.9e-09 37.7 0.0 1.0 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|21227271|ref|NP_633193.1| - 0.018 14.6 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 Cytidylyltransferase IspD PF01128.14 gi|21227271|ref|NP_633193.1| - 0.036 13.5 0.0 0.037 13.5 0.0 1.0 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Epimerase_2 PF02350.14 gi|21227272|ref|NP_633194.1| - 1.7e-111 372.3 0.0 1.9e-111 372.1 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.1 gi|21227272|ref|NP_633194.1| - 0.00023 21.0 0.1 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like DUF354 PF04007.7 gi|21227272|ref|NP_633194.1| - 0.0037 16.2 0.0 0.0078 15.1 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_4 PF13579.1 gi|21227272|ref|NP_633194.1| - 0.017 15.2 0.0 0.048 13.7 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain MGDG_synth PF06925.6 gi|21227272|ref|NP_633194.1| - 0.16 11.8 0.1 1.2 9.0 0.0 2.2 2 0 0 2 2 2 0 Monogalactosyldiacylglycerol (MGDG) synthase Acyl_transf_3 PF01757.17 gi|21227273|ref|NP_633195.1| - 1.2e-27 96.6 43.1 1.4e-27 96.4 29.9 1.0 1 0 0 1 1 1 1 Acyltransferase family CobD_Cbib PF03186.8 gi|21227273|ref|NP_633195.1| - 0.15 11.1 0.5 0.29 10.1 0.3 1.4 1 0 0 1 1 1 0 CobD/Cbib protein UDPG_MGDP_dh_N PF03721.9 gi|21227274|ref|NP_633196.1| - 2.4e-55 186.7 0.0 4.7e-55 185.8 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|21227274|ref|NP_633196.1| - 2e-29 101.6 0.0 4.2e-29 100.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|21227274|ref|NP_633196.1| - 4e-24 84.8 0.1 1.3e-23 83.1 0.0 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.10 gi|21227274|ref|NP_633196.1| - 6.6e-09 35.8 0.0 1.8e-08 34.3 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|21227274|ref|NP_633196.1| - 8.9e-05 22.2 0.2 0.0012 18.6 0.0 3.0 4 1 0 4 4 4 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 gi|21227274|ref|NP_633196.1| - 0.00042 20.0 0.0 0.00085 19.0 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|21227274|ref|NP_633196.1| - 0.00068 19.6 0.0 0.0025 17.7 0.0 2.0 2 0 0 2 2 2 1 TrkA-N domain Pyr_redox PF00070.22 gi|21227274|ref|NP_633196.1| - 0.0017 18.6 0.9 0.018 15.4 0.0 3.1 4 0 0 4 4 3 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.14 gi|21227274|ref|NP_633196.1| - 0.0023 17.1 0.1 0.73 8.9 0.0 3.0 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|21227274|ref|NP_633196.1| - 0.0044 16.4 0.0 0.0083 15.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.16 gi|21227274|ref|NP_633196.1| - 0.015 14.8 0.0 0.046 13.2 0.0 1.7 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.12 gi|21227274|ref|NP_633196.1| - 0.02 15.3 0.0 0.12 12.8 0.0 2.4 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent DAO PF01266.19 gi|21227274|ref|NP_633196.1| - 0.1 11.4 0.1 0.18 10.6 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase DDE_Tnp_IS66 PF03050.9 gi|21227275|ref|NP_633197.1| - 0.0058 15.8 0.0 0.0075 15.5 0.0 1.1 1 0 0 1 1 1 1 Transposase IS66 family DUF4096 PF13340.1 gi|21227276|ref|NP_633198.1| - 0.00029 20.6 0.0 0.00032 20.4 0.0 1.1 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) Polysacc_synt PF01943.12 gi|21227277|ref|NP_633199.1| - 1.3e-39 136.1 30.7 1.3e-39 136.1 21.3 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21227277|ref|NP_633199.1| - 2.4e-18 66.5 20.3 2.4e-18 66.5 14.1 3.0 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|21227277|ref|NP_633199.1| - 2.8e-17 62.8 58.8 6.1e-14 52.0 17.0 3.7 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MVIN PF03023.9 gi|21227277|ref|NP_633199.1| - 1e-08 34.0 41.3 1e-08 34.0 28.6 1.6 1 1 0 1 1 1 1 MviN-like protein DUF2206 PF09971.4 gi|21227278|ref|NP_633200.1| - 6.3e-89 298.3 40.8 6.3e-89 298.3 28.3 1.9 3 0 0 3 3 3 1 Predicted membrane protein (DUF2206) Glycos_transf_1 PF00534.15 gi|21227279|ref|NP_633201.1| - 5.3e-18 65.0 0.0 9.1e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21227279|ref|NP_633201.1| - 1.6e-08 34.4 0.8 3.8e-08 33.2 0.6 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|21227279|ref|NP_633201.1| - 2.6e-06 27.6 0.0 4.5e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227279|ref|NP_633201.1| - 0.00011 22.3 0.0 0.00019 21.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21227279|ref|NP_633201.1| - 0.007 16.5 0.0 0.0098 16.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|21227280|ref|NP_633202.1| - 1.9e-23 82.7 0.0 3.8e-23 81.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227280|ref|NP_633202.1| - 7.9e-12 45.4 0.0 1.3e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227280|ref|NP_633202.1| - 6.6e-07 29.5 0.0 1e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21227280|ref|NP_633202.1| - 3.6e-06 27.1 0.0 5.3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|21227280|ref|NP_633202.1| - 1.2e-05 25.1 3.2 0.00024 20.9 1.9 2.9 2 1 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|21227280|ref|NP_633202.1| - 1.6e-05 24.7 0.0 5.5e-05 22.9 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.15 gi|21227281|ref|NP_633203.1| - 3.6e-26 91.6 0.0 5.6e-26 90.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21227281|ref|NP_633203.1| - 6.5e-18 65.3 0.0 8.7e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|21227281|ref|NP_633203.1| - 3.2e-17 62.8 0.1 6.6e-17 61.7 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|21227281|ref|NP_633203.1| - 5.6e-15 55.6 0.0 9.5e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21227281|ref|NP_633203.1| - 3.9e-06 26.7 0.3 1.1e-05 25.2 0.2 1.8 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.6 gi|21227281|ref|NP_633203.1| - 7.8e-05 22.2 0.2 0.022 14.2 0.1 2.2 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_transf_41 PF13844.1 gi|21227281|ref|NP_633203.1| - 0.00028 18.9 0.0 0.00037 18.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 41 Syntaxin-18_N PF10496.4 gi|21227281|ref|NP_633203.1| - 0.019 14.7 0.2 0.044 13.6 0.2 1.6 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus GFO_IDH_MocA PF01408.17 gi|21227282|ref|NP_633204.1| - 3e-22 79.3 0.1 2.7e-21 76.2 0.0 2.3 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N PF00107.21 gi|21227282|ref|NP_633204.1| - 2.3e-20 72.4 0.0 1.2e-19 70.0 0.0 2.2 2 0 0 2 2 2 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|21227282|ref|NP_633204.1| - 5.8e-05 22.5 0.1 0.00015 21.2 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFO_IDH_MocA_C PF02894.12 gi|21227282|ref|NP_633204.1| - 0.00084 19.1 0.0 0.0023 17.7 0.0 1.7 2 0 0 2 2 1 1 Oxidoreductase family, C-terminal alpha/beta domain 2-Hacid_dh_C PF02826.14 gi|21227282|ref|NP_633204.1| - 0.0044 16.2 0.1 0.0088 15.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|21227282|ref|NP_633204.1| - 0.0098 15.8 0.0 0.025 14.5 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_18 PF12847.2 gi|21227282|ref|NP_633204.1| - 0.022 15.3 0.0 0.066 13.7 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N_2 PF13602.1 gi|21227282|ref|NP_633204.1| - 0.059 14.2 0.0 0.25 12.2 0.0 2.2 2 0 0 2 2 1 0 Zinc-binding dehydrogenase 3HCDH_N PF02737.13 gi|21227282|ref|NP_633204.1| - 0.068 12.8 0.1 0.068 12.8 0.1 2.7 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|21227282|ref|NP_633204.1| - 0.1 13.0 0.1 1 9.7 0.0 2.2 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain ADH_N PF08240.7 gi|21227282|ref|NP_633204.1| - 0.28 10.9 0.1 0.28 10.9 0.0 2.6 2 1 1 3 3 3 0 Alcohol dehydrogenase GroES-like domain Prenyltrans_1 PF13243.1 gi|21227283|ref|NP_633205.1| - 8.3e-09 35.4 0.0 0.0012 18.8 0.0 2.3 1 1 1 2 2 2 2 Prenyltransferase-like Pec_lyase PF09492.5 gi|21227283|ref|NP_633205.1| - 3.3e-05 23.2 0.8 2 7.5 0.0 3.1 2 1 1 3 3 3 3 Pectic acid lyase Glyco_hydro_88 PF07470.8 gi|21227283|ref|NP_633205.1| - 0.0011 18.1 0.0 0.0028 16.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl Hydrolase Family 88 Prenyltrans_2 PF13249.1 gi|21227283|ref|NP_633205.1| - 0.0016 18.8 0.1 0.008 16.5 0.0 2.2 1 1 1 2 2 2 1 Prenyltransferase-like Glycos_transf_1 PF00534.15 gi|21227284|ref|NP_633206.1| - 6.5e-21 74.4 0.0 1e-20 73.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227284|ref|NP_633206.1| - 5.5e-19 68.6 0.0 9.5e-19 67.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227284|ref|NP_633206.1| - 2.7e-10 40.3 0.0 5.7e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227284|ref|NP_633206.1| - 2.8e-10 40.1 0.0 7.4e-09 35.5 0.0 2.2 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21227284|ref|NP_633206.1| - 1.2e-06 28.7 0.0 1.5e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|21227284|ref|NP_633206.1| - 0.0084 15.9 0.2 0.042 13.6 0.1 2.1 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.21 gi|21227285|ref|NP_633207.1| - 2.4e-23 82.6 0.0 3.5e-23 82.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227285|ref|NP_633207.1| - 1.9e-10 40.9 0.0 2.6e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227285|ref|NP_633207.1| - 0.0073 16.6 0.0 0.014 15.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 MR_MLE_C PF13378.1 gi|21227285|ref|NP_633207.1| - 0.089 12.7 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Enolase C-terminal domain-like Tiny_TM_bacill PF09680.5 gi|21227285|ref|NP_633207.1| - 0.55 9.6 3.5 1.5 8.2 2.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (Tiny_TM_bacill) Glycos_transf_2 PF00535.21 gi|21227286|ref|NP_633208.1| - 8.3e-17 61.3 0.0 1.2e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227286|ref|NP_633208.1| - 4.4e-07 29.9 0.0 6.1e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227286|ref|NP_633208.1| - 0.041 14.1 0.0 0.08 13.2 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF373 PF04123.8 gi|21227286|ref|NP_633208.1| - 0.12 11.3 2.7 0.96 8.4 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF373) Glyco_transf_21 PF13506.1 gi|21227286|ref|NP_633208.1| - 0.12 11.6 0.0 0.21 10.8 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 DUF1616 PF07760.6 gi|21227287|ref|NP_633209.1| - 7.3e-115 383.0 3.4 8.2e-115 382.8 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) 7tm_3 PF00003.17 gi|21227287|ref|NP_633209.1| - 0.012 15.0 0.0 0.02 14.2 0.0 1.4 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR Abi PF02517.11 gi|21227288|ref|NP_633210.1| - 5e-17 61.8 7.3 5e-17 61.8 5.1 3.1 3 1 0 3 3 3 1 CAAX protease self-immunity DUF3236 PF11576.3 gi|21227288|ref|NP_633210.1| - 0.0043 16.4 0.2 0.0071 15.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3236) OCIA PF07051.6 gi|21227288|ref|NP_633210.1| - 0.27 10.6 5.8 0.42 10.0 0.2 2.8 2 1 1 3 3 3 0 Ovarian carcinoma immunoreactive antigen (OCIA) DUF2069 PF09842.4 gi|21227290|ref|NP_633212.1| - 0.0042 17.0 0.2 0.0043 16.9 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2069) Y_Y_Y PF07495.8 gi|21227291|ref|NP_633213.1| - 0.0024 17.5 0.4 0.077 12.7 0.0 2.8 3 0 0 3 3 3 1 Y_Y_Y domain PBP_sp32 PF07222.7 gi|21227291|ref|NP_633213.1| - 0.01 15.0 0.7 0.016 14.4 0.5 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF2271 PF10029.4 gi|21227291|ref|NP_633213.1| - 0.015 14.8 0.1 0.035 13.6 0.0 1.6 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) FlgD_ig PF13860.1 gi|21227291|ref|NP_633213.1| - 0.044 13.5 0.3 0.27 11.0 0.0 2.4 2 2 0 2 2 2 0 FlgD Ig-like domain Polysacc_synt_2 PF02719.10 gi|21227293|ref|NP_633215.1| - 0.032 13.1 0.0 0.032 13.1 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF4277 PF14104.1 gi|21227294|ref|NP_633216.1| - 1.3e-45 154.3 0.0 2.5e-45 153.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21227294|ref|NP_633216.1| - 2.3e-14 53.4 3.7 1.4e-13 50.9 2.6 2.0 1 1 0 1 1 1 1 Transposase DDE domain DUF2887 PF11103.3 gi|21227294|ref|NP_633216.1| - 4e-05 23.3 3.1 7.6e-05 22.3 2.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2887) Epimerase PF01370.16 gi|21227295|ref|NP_633217.1| - 1.2e-64 218.0 0.0 1.4e-64 217.7 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|21227295|ref|NP_633217.1| - 8.4e-29 100.1 0.0 1.1e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|21227295|ref|NP_633217.1| - 1.5e-18 66.7 0.0 1e-17 63.9 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|21227295|ref|NP_633217.1| - 1e-17 64.7 0.0 2.3e-17 63.5 0.0 1.5 1 1 0 1 1 1 1 NADH(P)-binding RmlD_sub_bind PF04321.12 gi|21227295|ref|NP_633217.1| - 3.9e-15 55.5 0.0 4.3e-15 55.3 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|21227295|ref|NP_633217.1| - 1.2e-11 43.9 0.0 1.2e-09 37.5 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.20 gi|21227295|ref|NP_633217.1| - 6.4e-10 39.1 0.0 1.6e-09 37.8 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase NmrA PF05368.8 gi|21227295|ref|NP_633217.1| - 7.6e-09 35.1 0.1 1.6e-08 34.0 0.0 1.5 2 0 0 2 2 2 1 NmrA-like family 3HCDH_N PF02737.13 gi|21227295|ref|NP_633217.1| - 0.00034 20.3 0.0 0.00046 19.8 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KR PF08659.5 gi|21227295|ref|NP_633217.1| - 0.0004 20.0 0.2 0.014 15.0 0.1 2.7 1 1 0 1 1 1 1 KR domain TrkA_N PF02254.13 gi|21227295|ref|NP_633217.1| - 0.0044 16.9 0.0 0.0081 16.1 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain NAD_Gly3P_dh_N PF01210.18 gi|21227295|ref|NP_633217.1| - 0.028 14.1 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.22 gi|21227295|ref|NP_633217.1| - 0.065 13.6 0.1 0.12 12.7 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Saccharop_dh PF03435.13 gi|21227295|ref|NP_633217.1| - 0.098 11.6 0.0 0.27 10.1 0.0 1.6 2 0 0 2 2 2 0 Saccharopine dehydrogenase DUF1616 PF07760.6 gi|21227296|ref|NP_633218.1| - 6e-104 347.2 1.8 6.7e-104 347.0 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Abi PF02517.11 gi|21227297|ref|NP_633219.1| - 1.6e-17 63.4 8.9 1.6e-17 63.4 6.2 2.4 2 1 0 2 2 2 1 CAAX protease self-immunity DUF1212 PF06738.7 gi|21227297|ref|NP_633219.1| - 8 5.8 10.7 8.4 5.8 1.7 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1212) Y_Y_Y PF07495.8 gi|21227298|ref|NP_633220.1| - 0.0048 16.6 0.1 0.026 14.2 0.0 2.2 2 0 0 2 2 2 1 Y_Y_Y domain DUF2407_C PF13373.1 gi|21227298|ref|NP_633220.1| - 0.022 14.6 0.0 0.043 13.7 0.0 1.4 1 0 0 1 1 1 0 DUF2407 C-terminal domain Filamin PF00630.14 gi|21227298|ref|NP_633220.1| - 0.043 14.3 0.6 0.39 11.3 0.0 2.3 1 1 1 2 2 2 0 Filamin/ABP280 repeat DUF3244 PF11589.3 gi|21227298|ref|NP_633220.1| - 0.091 12.4 0.2 0.31 10.7 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF3244) DUF1624 PF07786.7 gi|21227299|ref|NP_633221.1| - 4.5e-78 261.6 9.4 5.2e-78 261.4 6.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.17 gi|21227299|ref|NP_633221.1| - 1.9e-10 40.1 26.2 5.6e-05 22.1 11.7 2.4 1 1 1 2 2 2 2 Acyltransferase family OpgC_C PF10129.4 gi|21227299|ref|NP_633221.1| - 0.00012 20.8 8.3 0.00036 19.3 2.1 2.5 1 1 2 3 3 3 2 OpgC protein MULE PF10551.4 gi|21227300|ref|NP_633222.1| - 3.4e-11 43.1 0.0 8.4e-11 41.8 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21227300|ref|NP_633222.1| - 6.5e-05 22.2 1.0 0.00046 19.4 0.7 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21227300|ref|NP_633222.1| - 0.028 13.9 1.3 0.051 13.1 0.3 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Sgf11 PF08209.6 gi|21227300|ref|NP_633222.1| - 0.21 10.9 3.7 4.3 6.7 0.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) DUF4199 PF13858.1 gi|21227301|ref|NP_633223.1| - 0.18 11.7 2.4 0.18 11.7 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Ribosomal_S17e PF00833.13 gi|21227302|ref|NP_633224.1| - 4.5e-16 58.7 2.7 5e-16 58.5 1.9 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.17 gi|21227303|ref|NP_633225.1| - 3.4e-102 340.9 0.0 3.8e-102 340.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ThiG PF05690.9 gi|21227303|ref|NP_633225.1| - 0.04 12.9 0.0 0.07 12.1 0.0 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG DapB_C PF05173.9 gi|21227304|ref|NP_633226.1| - 1.7e-49 166.9 0.1 2.4e-49 166.5 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.15 gi|21227304|ref|NP_633226.1| - 5.8e-33 113.4 2.0 9.1e-33 112.8 1.4 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|21227304|ref|NP_633226.1| - 0.021 15.1 0.5 0.063 13.5 0.2 2.0 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain 3Beta_HSD PF01073.14 gi|21227304|ref|NP_633226.1| - 0.022 13.4 0.7 0.031 12.9 0.5 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family GFO_IDH_MocA PF01408.17 gi|21227304|ref|NP_633226.1| - 0.027 14.9 0.4 0.82 10.2 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold LPAM_2 PF13627.1 gi|21227304|ref|NP_633226.1| - 0.22 11.2 0.2 0.22 11.2 0.1 2.4 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site HTH_Tnp_4 PF13613.1 gi|21227306|ref|NP_633228.1| - 0.0097 15.4 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_23 PF13384.1 gi|21227306|ref|NP_633228.1| - 0.023 14.3 0.0 0.054 13.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_24 PF13412.1 gi|21227306|ref|NP_633228.1| - 0.025 13.9 0.0 0.045 13.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.1 gi|21227306|ref|NP_633228.1| - 0.042 13.6 0.6 0.13 12.0 0.1 2.1 2 1 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_7 PF02796.10 gi|21227306|ref|NP_633228.1| - 0.096 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_10 PF04967.7 gi|21227306|ref|NP_633228.1| - 0.11 12.0 0.1 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_1 PF00126.22 gi|21227306|ref|NP_633228.1| - 0.14 11.9 0.2 0.22 11.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF1673 PF07895.6 gi|21227307|ref|NP_633229.1| - 1.7e-74 249.7 18.5 7.3e-74 247.7 12.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) Hid1 PF12722.2 gi|21227307|ref|NP_633229.1| - 0.13 9.8 4.9 0.19 9.3 3.4 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein NDUF_B12 PF08122.7 gi|21227307|ref|NP_633229.1| - 1.6 8.5 5.4 12 5.6 0.4 2.7 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase B12 subunit family DUF4131 PF13567.1 gi|21227307|ref|NP_633229.1| - 3.7 6.9 17.8 3 7.2 0.3 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4131) DUF1673 PF07895.6 gi|21227308|ref|NP_633230.1| - 5.2e-74 248.2 7.7 5.9e-74 248.0 5.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) UPF0154 PF03672.8 gi|21227308|ref|NP_633230.1| - 0.32 10.6 2.3 2.6 7.7 0.2 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) DUF4131 PF13567.1 gi|21227308|ref|NP_633230.1| - 1.7 8.0 6.2 2.7 7.3 3.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) RseC_MucC PF04246.7 gi|21227308|ref|NP_633230.1| - 6.4 6.3 6.5 2.1 7.9 0.5 2.1 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF1673 PF07895.6 gi|21227309|ref|NP_633231.1| - 3.9e-68 229.0 5.8 4.4e-68 228.8 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) DUF872 PF05915.7 gi|21227309|ref|NP_633231.1| - 0.0014 18.4 0.3 0.0024 17.7 0.2 1.4 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) OppC_N PF12911.2 gi|21227309|ref|NP_633231.1| - 0.0016 17.7 1.7 0.0036 16.6 1.2 1.7 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C PrgI PF12666.2 gi|21227309|ref|NP_633231.1| - 0.073 13.2 5.4 1.2 9.3 0.9 2.2 1 1 1 2 2 2 0 PrgI family protein DUF3488 PF11992.3 gi|21227309|ref|NP_633231.1| - 0.14 10.7 3.0 0.11 11.0 1.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3488) RDD PF06271.7 gi|21227309|ref|NP_633231.1| - 0.31 10.9 4.9 0.61 9.9 2.4 1.9 2 0 0 2 2 2 0 RDD family DUF4131 PF13567.1 gi|21227309|ref|NP_633231.1| - 0.55 9.6 4.6 0.52 9.6 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF2207 PF09972.4 gi|21227309|ref|NP_633231.1| - 3.5 6.0 7.7 13 4.2 5.3 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1673 PF07895.6 gi|21227310|ref|NP_633232.1| - 1.6e-66 223.7 3.5 1.8e-66 223.5 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) NMN_transporter PF04973.7 gi|21227310|ref|NP_633232.1| - 0.13 11.6 8.8 0.18 11.2 6.1 1.2 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter DUF2976 PF11190.3 gi|21227310|ref|NP_633232.1| - 0.19 11.2 1.8 0.33 10.4 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) DUF4097 PF13349.1 gi|21227310|ref|NP_633232.1| - 0.76 9.3 4.0 2.5 7.6 0.9 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4097) DUF2985 PF11204.3 gi|21227310|ref|NP_633232.1| - 1.1 9.0 5.6 0.51 10.1 1.1 2.4 1 1 1 3 3 3 0 Protein of unknown function (DUF2985) DUF3671 PF12420.3 gi|21227310|ref|NP_633232.1| - 1.6 8.7 6.7 5.8 6.9 1.9 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF3353 PF11833.3 gi|21227310|ref|NP_633232.1| - 3.7 6.9 5.2 17 4.7 3.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3353) RDD PF06271.7 gi|21227310|ref|NP_633232.1| - 3.7 7.4 9.0 2.5 8.0 1.4 2.3 2 0 0 2 2 2 0 RDD family DUF1673 PF07895.6 gi|21227311|ref|NP_633233.1| - 2.7e-73 245.8 5.2 3.1e-73 245.6 3.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) DUF4131 PF13567.1 gi|21227311|ref|NP_633233.1| - 0.3 10.4 5.5 2.8 7.3 3.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1673 PF07895.6 gi|21227312|ref|NP_633234.1| - 3.9e-42 144.1 7.3 4.6e-42 143.8 5.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) PyrI PF01948.13 gi|21227314|ref|NP_633236.1| - 2.8e-32 110.6 1.7 3.8e-32 110.1 1.2 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|21227314|ref|NP_633236.1| - 1.3e-17 62.9 3.7 2.6e-17 62.0 2.5 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.16 gi|21227315|ref|NP_633237.1| - 1.9e-46 157.2 0.0 1e-45 154.8 0.0 1.9 2 1 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.19 gi|21227315|ref|NP_633237.1| - 4.5e-38 130.6 0.0 6.2e-38 130.1 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Borrelia_P83 PF05262.6 gi|21227316|ref|NP_633238.1| - 2.2 6.4 7.2 5.3 5.1 0.4 2.0 1 1 1 2 2 2 0 Borrelia P83/100 protein Methyltransf_6 PF03737.10 gi|21227317|ref|NP_633239.1| - 8.6e-36 123.1 1.1 8.6e-36 123.1 0.8 2.2 2 0 0 2 2 2 1 Demethylmenaquinone methyltransferase OMPdecase PF00215.19 gi|21227317|ref|NP_633239.1| - 1.9e-17 63.4 5.3 5.2e-17 62.0 3.6 1.8 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.9 gi|21227317|ref|NP_633239.1| - 5e-07 28.8 1.9 5e-07 28.8 1.3 1.9 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.16 gi|21227317|ref|NP_633239.1| - 1.7e-06 27.5 2.6 1.1e-05 24.8 0.9 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|21227317|ref|NP_633239.1| - 4.5e-05 22.8 7.7 0.00038 19.7 0.8 3.3 2 1 1 3 3 3 1 PcrB family PEP_mutase PF13714.1 gi|21227317|ref|NP_633239.1| - 0.00068 18.9 2.6 0.023 13.9 0.1 2.8 1 1 2 3 3 3 2 Phosphoenolpyruvate phosphomutase HMGL-like PF00682.14 gi|21227317|ref|NP_633239.1| - 0.0017 18.0 1.5 0.016 14.8 0.1 2.4 1 1 1 2 2 2 1 HMGL-like Peripla_BP_4 PF13407.1 gi|21227317|ref|NP_633239.1| - 0.017 14.5 1.6 0.026 13.9 1.1 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain ADH_zinc_N PF00107.21 gi|21227317|ref|NP_633239.1| - 0.017 14.6 2.6 2 7.9 0.2 2.6 1 1 1 2 2 2 0 Zinc-binding dehydrogenase Ribul_P_3_epim PF00834.14 gi|21227317|ref|NP_633239.1| - 0.037 13.1 1.5 0.41 9.7 0.1 2.4 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family IGPS PF00218.16 gi|21227317|ref|NP_633239.1| - 0.094 11.7 0.7 0.14 11.1 0.5 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DUF561 PF04481.7 gi|21227317|ref|NP_633239.1| - 0.23 10.3 2.2 0.96 8.3 0.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF561) TPP_enzyme_M PF00205.17 gi|21227317|ref|NP_633239.1| - 0.3 10.8 2.5 2.9 7.6 0.1 3.0 2 2 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain DUF1628 PF07790.6 gi|21227318|ref|NP_633240.1| - 0.022 15.4 0.1 0.051 14.3 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) RQC PF09382.5 gi|21227319|ref|NP_633241.1| - 2.9e-29 100.8 0.0 9.3e-29 99.2 0.0 1.9 1 0 0 1 1 1 1 RQC domain DEAD PF00270.24 gi|21227319|ref|NP_633241.1| - 1.2e-20 73.7 0.0 2.9e-19 69.1 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase HRDC PF00570.18 gi|21227319|ref|NP_633241.1| - 2.2e-20 72.1 0.0 4.5e-20 71.1 0.0 1.6 1 0 0 1 1 1 1 HRDC domain Helicase_C PF00271.26 gi|21227319|ref|NP_633241.1| - 8.1e-19 67.2 0.4 4.9e-17 61.5 0.0 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain HTH_40 PF14493.1 gi|21227319|ref|NP_633241.1| - 8.3e-11 41.9 0.6 2.3e-10 40.5 0.4 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Helicase_Sgs1 PF11408.3 gi|21227319|ref|NP_633241.1| - 1.1e-06 28.3 0.0 2.6e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Sgs1 RecQ helicase ResIII PF04851.10 gi|21227319|ref|NP_633241.1| - 0.0035 17.2 0.0 0.028 14.2 0.0 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Sigma70_r4_2 PF08281.7 gi|21227319|ref|NP_633241.1| - 0.08 12.4 0.0 0.25 10.8 0.0 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 GMP_synt_C PF00958.17 gi|21227320|ref|NP_633242.1| - 3.6e-30 103.5 0.0 8e-30 102.4 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|21227320|ref|NP_633242.1| - 2.1e-09 36.6 0.0 0.00012 21.1 0.0 2.1 2 0 0 2 2 2 2 NAD synthase Asn_synthase PF00733.16 gi|21227320|ref|NP_633242.1| - 0.00021 20.8 0.1 0.00056 19.4 0.0 1.6 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.8 gi|21227320|ref|NP_633242.1| - 0.00046 19.5 0.0 0.00096 18.4 0.0 1.5 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|21227320|ref|NP_633242.1| - 0.0011 17.5 0.0 0.033 12.7 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.14 gi|21227320|ref|NP_633242.1| - 0.0058 16.4 0.0 0.0088 15.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.9 gi|21227320|ref|NP_633242.1| - 0.018 14.5 0.1 0.04 13.3 0.0 1.7 2 1 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Radical_SAM PF04055.16 gi|21227321|ref|NP_633243.1| - 1.9e-07 31.3 0.0 3.8e-07 30.4 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily ELYS PF13934.1 gi|21227321|ref|NP_633243.1| - 0.044 13.5 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Nuclear pore complex assembly AgrD PF05931.6 gi|21227321|ref|NP_633243.1| - 0.12 12.0 0.2 1.6 8.4 0.0 2.4 2 0 0 2 2 2 0 Staphylococcal AgrD protein AA_kinase PF00696.23 gi|21227322|ref|NP_633244.1| - 3.6e-41 141.3 5.4 4.1e-41 141.1 3.7 1.0 1 0 0 1 1 1 1 Amino acid kinase family MC1 PF05854.6 gi|21227323|ref|NP_633245.1| - 2e-47 159.1 1.8 2.2e-47 158.9 1.3 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 GCHY-1 PF02649.9 gi|21227324|ref|NP_633246.1| - 7.8e-94 313.9 2.4 8.8e-94 313.8 1.6 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.13 gi|21227324|ref|NP_633246.1| - 0.0057 16.8 1.0 0.51 10.5 0.0 3.4 4 1 0 4 4 4 1 Dihydroneopterin aldolase DUF2098 PF09871.4 gi|21227325|ref|NP_633247.1| - 1.5e-29 101.8 2.1 1.7e-29 101.5 1.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) DUF2114 PF09887.4 gi|21227326|ref|NP_633248.1| - 3.8e-229 760.4 6.2 4.5e-229 760.2 4.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) FrhB_FdhB_C PF04432.8 gi|21227327|ref|NP_633249.1| - 7.7e-43 145.6 0.0 7.7e-43 145.6 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|21227327|ref|NP_633249.1| - 2.8e-26 91.1 0.0 6.7e-26 89.9 0.0 1.7 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.8 gi|21227327|ref|NP_633249.1| - 4.7e-11 42.3 3.1 7.5e-11 41.7 1.4 1.9 2 0 0 2 2 2 1 YHS domain Fer4_7 PF12838.2 gi|21227327|ref|NP_633249.1| - 0.0045 17.3 10.8 0.057 13.8 0.6 3.1 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227327|ref|NP_633249.1| - 0.0058 16.6 12.6 0.21 11.6 1.5 3.0 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227327|ref|NP_633249.1| - 0.0062 16.3 14.1 0.0065 16.2 8.0 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain zf-FCS PF06467.9 gi|21227327|ref|NP_633249.1| - 0.0068 16.0 3.3 0.0068 16.0 2.3 2.7 4 0 0 4 4 2 1 MYM-type Zinc finger with FCS sequence motif Fer4_15 PF13459.1 gi|21227327|ref|NP_633249.1| - 0.028 14.9 5.1 3 8.4 0.1 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4 PF00037.22 gi|21227327|ref|NP_633249.1| - 0.065 12.8 18.0 0.14 11.8 2.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21227327|ref|NP_633249.1| - 0.17 12.1 16.3 0.31 11.3 1.9 2.7 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227327|ref|NP_633249.1| - 0.17 12.6 12.4 1.6 9.5 0.5 3.2 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|21227327|ref|NP_633249.1| - 0.24 11.3 15.3 0.14 12.0 1.4 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain DUF581 PF04570.9 gi|21227327|ref|NP_633249.1| - 0.35 10.1 4.8 0.67 9.2 1.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF581) Fer4_17 PF13534.1 gi|21227327|ref|NP_633249.1| - 0.36 11.2 17.3 0.84 10.0 2.0 3.0 2 1 2 4 4 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227327|ref|NP_633249.1| - 0.51 10.2 10.9 1.8 8.4 7.5 2.0 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227327|ref|NP_633249.1| - 1.3 9.4 22.3 0.2 12.0 0.7 3.5 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227327|ref|NP_633249.1| - 1.8 8.6 18.0 0.46 10.5 2.1 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Glu-tRNAGln PF02686.10 gi|21227328|ref|NP_633250.1| - 2.3e-21 75.3 0.4 2.8e-21 75.1 0.3 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.16 gi|21227329|ref|NP_633251.1| - 2e-158 527.8 0.0 2.3e-158 527.6 0.0 1.0 1 0 0 1 1 1 1 Amidase PSII_BNR PF14870.1 gi|21227329|ref|NP_633251.1| - 0.033 13.2 0.0 0.053 12.5 0.0 1.3 1 0 0 1 1 1 0 Photosynthesis system II assembly factor YCF48 GatB_N PF02934.10 gi|21227330|ref|NP_633252.1| - 2.7e-113 377.6 0.0 3.5e-113 377.2 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|21227330|ref|NP_633252.1| - 5.8e-49 165.6 0.2 9e-49 164.9 0.1 1.3 1 0 0 1 1 1 1 GatB domain CN_hydrolase PF00795.17 gi|21227331|ref|NP_633253.1| - 1.5e-22 79.8 0.0 1.9e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF1056 PF06341.6 gi|21227332|ref|NP_633254.1| - 9.1 6.3 14.6 0.36 10.8 3.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1056) Methyltransf_31 PF13847.1 gi|21227333|ref|NP_633255.1| - 1.6e-23 82.9 0.0 1.9e-23 82.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227333|ref|NP_633255.1| - 5.7e-16 58.7 0.0 7.9e-16 58.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227333|ref|NP_633255.1| - 8.8e-14 51.5 0.0 1.1e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227333|ref|NP_633255.1| - 2.4e-11 43.9 0.0 3.4e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227333|ref|NP_633255.1| - 3.2e-10 40.5 0.0 4.2e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227333|ref|NP_633255.1| - 4.9e-10 39.6 0.0 6.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21227333|ref|NP_633255.1| - 9.7e-09 34.6 0.0 1.2e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|21227333|ref|NP_633255.1| - 2.6e-08 33.9 0.0 3.8e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21227333|ref|NP_633255.1| - 7.2e-07 28.7 0.0 9.5e-07 28.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.9 gi|21227333|ref|NP_633255.1| - 1.8e-06 27.4 0.0 2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Fibrillarin PF01269.12 gi|21227333|ref|NP_633255.1| - 6.3e-06 25.2 0.0 7.5e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin FtsJ PF01728.14 gi|21227333|ref|NP_633255.1| - 3.9e-05 23.7 0.0 6.3e-05 23.0 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase PrmA PF06325.8 gi|21227333|ref|NP_633255.1| - 7e-05 22.0 0.0 8e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.9 gi|21227333|ref|NP_633255.1| - 0.00023 20.3 0.0 0.00032 19.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.14 gi|21227333|ref|NP_633255.1| - 0.00039 20.0 0.0 0.00045 19.8 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.15 gi|21227333|ref|NP_633255.1| - 0.00084 18.4 0.0 0.0011 18.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FmrO PF07091.6 gi|21227333|ref|NP_633255.1| - 0.00088 18.3 0.0 0.001 18.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) TPMT PF05724.6 gi|21227333|ref|NP_633255.1| - 0.015 14.7 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) GCD14 PF08704.5 gi|21227333|ref|NP_633255.1| - 0.051 13.0 0.0 0.08 12.4 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Met_10 PF02475.11 gi|21227333|ref|NP_633255.1| - 0.051 13.1 0.0 0.055 13.0 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_29 PF03141.11 gi|21227333|ref|NP_633255.1| - 0.062 11.6 0.0 0.38 9.0 0.0 1.7 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_24 PF13578.1 gi|21227333|ref|NP_633255.1| - 0.094 13.5 0.0 0.13 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain VKOR PF07884.9 gi|21227335|ref|NP_633257.1| - 0.0021 17.8 2.2 0.0033 17.2 1.5 1.2 1 0 0 1 1 1 1 Vitamin K epoxide reductase family Rpr2 PF04032.11 gi|21227335|ref|NP_633257.1| - 0.013 15.2 8.8 0.36 10.7 1.0 2.4 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Zn_Tnp_IS1595 PF12760.2 gi|21227335|ref|NP_633257.1| - 0.023 14.4 2.0 0.023 14.4 1.4 3.1 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Ammonium_transp PF00909.16 gi|21227335|ref|NP_633257.1| - 0.034 12.6 1.0 0.047 12.1 0.7 1.2 1 0 0 1 1 1 0 Ammonium Transporter Family zf-RanBP PF00641.13 gi|21227335|ref|NP_633257.1| - 0.065 12.3 0.2 0.065 12.3 0.1 2.9 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Cytochrome_C7 PF14522.1 gi|21227335|ref|NP_633257.1| - 0.09 12.4 0.7 0.61 9.7 0.1 2.1 1 1 1 2 2 2 0 Cytochrome c7 C1_1 PF00130.17 gi|21227335|ref|NP_633257.1| - 0.32 10.7 5.5 2 8.1 0.6 2.8 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ribbon_3 PF13248.1 gi|21227335|ref|NP_633257.1| - 0.34 10.1 7.0 10 5.5 0.6 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|21227335|ref|NP_633257.1| - 0.71 10.2 9.5 9.5 6.6 2.5 3.0 1 1 2 3 3 3 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.1 gi|21227335|ref|NP_633257.1| - 1.2 8.7 5.6 6.4 6.3 0.3 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Zn_ribbon_recom PF13408.1 gi|21227335|ref|NP_633257.1| - 1.3 9.3 15.8 1.7 8.9 2.5 2.7 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain HypA PF01155.14 gi|21227335|ref|NP_633257.1| - 1.6 8.4 11.2 10 5.8 1.4 2.6 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family FYVE PF01363.16 gi|21227335|ref|NP_633257.1| - 3.7 7.5 11.8 34 4.4 8.1 2.4 1 1 0 1 1 1 0 FYVE zinc finger A2L_zn_ribbon PF08792.5 gi|21227335|ref|NP_633257.1| - 4.6 6.8 11.8 22 4.6 0.4 4.0 4 0 0 4 4 4 0 A2L zinc ribbon domain DZR PF12773.2 gi|21227335|ref|NP_633257.1| - 6.2 6.7 12.8 8.1 6.3 2.6 2.8 2 2 0 2 2 2 0 Double zinc ribbon Zn-ribbon_8 PF09723.5 gi|21227335|ref|NP_633257.1| - 8 6.5 12.2 7.3 6.6 0.0 4.0 4 0 0 4 4 4 0 Zinc ribbon domain RibD_C PF01872.12 gi|21227336|ref|NP_633258.1| - 1.3e-16 60.8 0.0 1.5e-16 60.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain DHFR_1 PF00186.14 gi|21227336|ref|NP_633258.1| - 1.8e-07 30.8 0.0 1.9e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Dihydrofolate reductase NTS PF15447.1 gi|21227336|ref|NP_633258.1| - 0.029 14.7 0.0 0.086 13.2 0.0 1.7 2 0 0 2 2 2 0 N-terminal segments of PfEMP1 Mrr_cat PF04471.7 gi|21227337|ref|NP_633259.1| - 3.9e-36 123.3 0.0 6.7e-36 122.6 0.0 1.4 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.1 gi|21227337|ref|NP_633259.1| - 7.5e-31 106.0 0.1 1.5e-30 105.1 0.0 1.5 1 0 0 1 1 1 1 Mrr N-terminal domain Peptidase_M48 PF01435.13 gi|21227338|ref|NP_633260.1| - 3e-37 128.3 0.0 3.8e-37 128.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|21227338|ref|NP_633260.1| - 0.0001 21.3 0.0 0.00018 20.6 0.0 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 Peptidase_MA_2 PF13485.1 gi|21227338|ref|NP_633260.1| - 0.12 12.3 0.5 0.32 11.0 0.4 1.8 1 1 0 1 1 1 0 Peptidase MA superfamily DUF1282 PF06930.7 gi|21227338|ref|NP_633260.1| - 2.1 7.9 8.1 0.22 11.1 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1282) Thymidylat_synt PF00303.14 gi|21227339|ref|NP_633261.1| - 1e-36 126.3 0.0 1.3e-35 122.7 0.0 1.9 1 1 0 1 1 1 1 Thymidylate synthase EPSP_synthase PF00275.15 gi|21227340|ref|NP_633262.1| - 2.6e-108 362.1 1.0 3e-108 361.9 0.7 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MTS PF05175.9 gi|21227341|ref|NP_633263.1| - 2.9e-06 26.7 0.0 5e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|21227341|ref|NP_633263.1| - 1.7e-05 24.0 0.0 4.4e-05 22.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|21227341|ref|NP_633263.1| - 0.00068 19.6 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|21227341|ref|NP_633263.1| - 0.0023 17.3 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.2 gi|21227341|ref|NP_633263.1| - 0.0078 16.7 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227341|ref|NP_633263.1| - 0.019 14.5 0.1 0.23 11.0 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain CbiA PF01656.18 gi|21227341|ref|NP_633263.1| - 0.032 13.6 0.0 0.07 12.5 0.0 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain MCR_alpha_N PF02745.10 gi|21227342|ref|NP_633264.1| - 3.8e-146 485.3 1.3 4.9e-146 484.9 0.9 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|21227342|ref|NP_633264.1| - 1.8e-66 221.9 4.4 6.1e-66 220.2 3.0 2.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.11 gi|21227343|ref|NP_633265.1| - 1e-124 414.5 0.3 1.2e-124 414.3 0.2 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.7 gi|21227344|ref|NP_633266.1| - 3.3e-43 147.4 4.1 6.4e-37 126.8 1.7 2.8 1 1 1 2 2 2 2 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.9 gi|21227345|ref|NP_633267.1| - 5.9e-56 188.2 0.1 6.8e-56 188.0 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.13 gi|21227346|ref|NP_633268.1| - 2.8e-129 429.8 6.5 4.3e-129 429.1 4.5 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|21227346|ref|NP_633268.1| - 2.3e-82 274.9 3.3 2.3e-82 274.9 2.3 1.8 2 0 0 2 2 2 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain DUF512 PF04459.7 gi|21227347|ref|NP_633269.1| - 8e-27 93.6 0.0 1.2e-26 93.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF512) Radical_SAM PF04055.16 gi|21227347|ref|NP_633269.1| - 6.7e-10 39.3 5.7 3.9e-08 33.6 4.0 2.8 1 1 0 1 1 1 1 Radical SAM superfamily PolC_DP2 PF03833.8 gi|21227348|ref|NP_633270.1| - 0 1217.0 0.1 0 1216.3 0.0 1.3 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 TerY-C PF15616.1 gi|21227348|ref|NP_633270.1| - 0.00023 21.0 2.7 0.00023 21.0 1.9 2.4 2 0 0 2 2 2 1 TerY-C metal binding domain HTH_3 PF01381.17 gi|21227348|ref|NP_633270.1| - 0.034 13.9 1.4 1 9.2 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix DUF2072 PF09845.4 gi|21227348|ref|NP_633270.1| - 0.061 13.2 0.1 0.061 13.2 0.1 3.0 3 0 0 3 3 3 0 Zn-ribbon containing protein (DUF2072) DUF555 PF04475.7 gi|21227348|ref|NP_633270.1| - 0.11 12.5 1.2 1.6 8.8 0.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF555) HypA PF01155.14 gi|21227348|ref|NP_633270.1| - 3.8 7.2 13.3 0.39 10.4 0.2 3.1 2 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family MarC PF01914.12 gi|21227349|ref|NP_633271.1| - 0.0026 16.9 0.4 0.0028 16.8 0.3 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein Tic20 PF09685.5 gi|21227349|ref|NP_633271.1| - 0.027 14.4 0.1 0.03 14.2 0.1 1.1 1 0 0 1 1 1 0 Tic20-like protein DUF4191 PF13829.1 gi|21227349|ref|NP_633271.1| - 0.085 11.9 0.3 0.092 11.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF4212 PF13937.1 gi|21227349|ref|NP_633271.1| - 0.096 12.6 0.3 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) Tetraspannin PF00335.15 gi|21227349|ref|NP_633271.1| - 0.17 11.1 1.2 0.19 10.9 0.8 1.1 1 0 0 1 1 1 0 Tetraspanin family Sua5_yciO_yrdC PF01300.13 gi|21227350|ref|NP_633272.1| - 9.4e-56 187.8 0.0 1.3e-55 187.4 0.0 1.2 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.8 gi|21227350|ref|NP_633272.1| - 9.1e-23 80.6 0.0 1.6e-22 79.8 0.0 1.4 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding DUF613 PF04764.7 gi|21227350|ref|NP_633272.1| - 0.15 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF613) RuBisCO_large PF00016.15 gi|21227351|ref|NP_633273.1| - 6.3e-87 291.3 0.0 7.7e-87 291.0 0.0 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.11 gi|21227351|ref|NP_633273.1| - 1.8e-21 76.0 0.0 1e-20 73.6 0.0 2.1 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1646 PF07854.7 gi|21227352|ref|NP_633274.1| - 9.9e-156 518.1 30.2 1.1e-155 517.9 20.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) Caveolin PF01146.12 gi|21227352|ref|NP_633274.1| - 0.4 10.2 6.7 1.7 8.2 1.8 2.6 2 0 0 2 2 2 0 Caveolin DUF1646 PF07854.7 gi|21227353|ref|NP_633275.1| - 3.3e-160 532.9 25.3 3.8e-160 532.7 17.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.7 gi|21227354|ref|NP_633276.1| - 2e-159 530.3 26.9 2.3e-159 530.1 18.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF1646 PF07854.7 gi|21227355|ref|NP_633277.1| - 8.6e-163 541.4 27.8 9.9e-163 541.2 19.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DUF2976 PF11190.3 gi|21227355|ref|NP_633277.1| - 6.3 6.4 13.0 0.34 10.4 2.0 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2976) HSP20 PF00011.16 gi|21227356|ref|NP_633278.1| - 1.2e-05 25.0 0.5 6.5e-05 22.7 0.1 1.9 1 1 1 2 2 2 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21227356|ref|NP_633278.1| - 0.025 15.1 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 CS domain GvpH PF05455.6 gi|21227356|ref|NP_633278.1| - 0.064 12.8 0.0 5.6 6.5 0.0 2.1 2 0 0 2 2 2 0 GvpH HSP20 PF00011.16 gi|21227357|ref|NP_633279.1| - 1.1e-08 34.8 0.6 1.8e-06 27.7 0.4 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21227357|ref|NP_633279.1| - 0.071 13.6 0.1 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 CS domain Imm42 PF15601.1 gi|21227357|ref|NP_633279.1| - 0.1 12.0 0.0 0.22 10.9 0.0 1.6 2 0 0 2 2 2 0 Immunity protein 42 AAA PF00004.24 gi|21227358|ref|NP_633280.1| - 1.9e-100 332.2 0.1 1.8e-49 167.3 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|21227358|ref|NP_633280.1| - 2.9e-28 97.6 0.7 8.4e-27 92.9 0.7 2.8 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|21227358|ref|NP_633280.1| - 5.3e-17 62.2 0.0 5.4e-07 29.6 0.0 3.2 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|21227358|ref|NP_633280.1| - 5.1e-16 58.4 0.1 6.1e-08 32.0 0.0 3.1 2 2 1 3 3 3 2 Holliday junction DNA helicase ruvB N-terminus CDC48_2 PF02933.12 gi|21227358|ref|NP_633280.1| - 6.1e-16 57.8 0.3 2.1e-15 56.1 0.2 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.1 gi|21227358|ref|NP_633280.1| - 3e-15 56.6 0.0 5.3e-06 26.5 0.0 3.0 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21227358|ref|NP_633280.1| - 4.4e-13 49.5 0.2 0.0003 20.9 0.0 4.3 2 2 0 2 2 2 2 AAA domain AAA_5 PF07728.9 gi|21227358|ref|NP_633280.1| - 6e-13 48.7 1.1 4.8e-05 23.1 0.1 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21227358|ref|NP_633280.1| - 8.4e-13 49.2 0.1 2.4e-05 25.1 0.0 3.0 2 1 1 3 3 2 2 AAA domain AAA_14 PF13173.1 gi|21227358|ref|NP_633280.1| - 2.2e-12 46.9 0.0 3.4e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|21227358|ref|NP_633280.1| - 7.8e-12 45.2 0.0 2.4e-05 24.2 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.8 gi|21227358|ref|NP_633280.1| - 7.9e-12 44.5 0.1 3.7e-05 22.6 0.0 2.4 2 0 0 2 2 2 2 TIP49 C-terminus Zeta_toxin PF06414.7 gi|21227358|ref|NP_633280.1| - 3.2e-10 39.4 2.7 0.00021 20.4 0.0 2.9 3 0 0 3 3 2 2 Zeta toxin AAA_19 PF13245.1 gi|21227358|ref|NP_633280.1| - 7.5e-10 38.4 0.1 0.0023 17.6 0.1 3.0 2 0 0 2 2 2 2 Part of AAA domain Sigma54_activat PF00158.21 gi|21227358|ref|NP_633280.1| - 1.2e-08 34.6 0.1 0.0084 15.5 0.0 4.0 2 2 0 2 2 2 2 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|21227358|ref|NP_633280.1| - 3.2e-08 33.1 0.0 0.0049 16.3 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.1 gi|21227358|ref|NP_633280.1| - 3.4e-08 33.8 0.2 0.0086 16.3 0.0 3.4 3 0 0 3 3 2 2 AAA domain AAA_28 PF13521.1 gi|21227358|ref|NP_633280.1| - 1.2e-07 31.8 0.4 0.01 15.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain Mg_chelatase PF01078.16 gi|21227358|ref|NP_633280.1| - 1.5e-07 30.8 0.0 0.013 14.6 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.6 gi|21227358|ref|NP_633280.1| - 3.1e-07 30.0 0.0 0.016 14.8 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.22 gi|21227358|ref|NP_633280.1| - 4.2e-07 30.3 0.0 0.045 14.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter NACHT PF05729.7 gi|21227358|ref|NP_633280.1| - 6e-07 29.2 0.2 0.31 10.6 0.0 4.1 3 1 1 4 4 4 2 NACHT domain Sigma54_activ_2 PF14532.1 gi|21227358|ref|NP_633280.1| - 2.1e-06 27.8 0.0 0.081 12.9 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|21227358|ref|NP_633280.1| - 3.4e-06 27.1 0.0 0.076 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase DUF815 PF05673.8 gi|21227358|ref|NP_633280.1| - 6.5e-06 25.2 0.0 0.067 12.1 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.1 gi|21227358|ref|NP_633280.1| - 2.3e-05 23.9 6.6 0.61 9.4 0.1 4.1 2 2 1 3 3 3 2 AAA domain PhoH PF02562.11 gi|21227358|ref|NP_633280.1| - 2.5e-05 23.6 0.1 0.15 11.3 0.0 2.6 2 0 0 2 2 2 2 PhoH-like protein Arch_ATPase PF01637.13 gi|21227358|ref|NP_633280.1| - 2.6e-05 24.0 4.7 0.14 11.7 0.0 3.8 3 2 1 4 4 4 2 Archaeal ATPase ATP-synt_ab PF00006.20 gi|21227358|ref|NP_633280.1| - 2.7e-05 23.7 0.0 0.096 12.1 0.0 2.4 2 1 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain AAA_11 PF13086.1 gi|21227358|ref|NP_633280.1| - 5.6e-05 22.8 1.1 0.16 11.5 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.1 gi|21227358|ref|NP_633280.1| - 7.8e-05 22.3 0.0 0.64 9.5 0.0 2.8 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.5 gi|21227358|ref|NP_633280.1| - 0.00011 22.0 0.6 0.046 13.6 0.0 3.6 3 0 0 3 3 3 1 Vps4 C terminal oligomerisation domain AAA_24 PF13479.1 gi|21227358|ref|NP_633280.1| - 0.00012 21.7 0.1 0.28 10.7 0.0 2.9 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.17 gi|21227358|ref|NP_633280.1| - 0.00012 21.0 0.0 0.33 9.7 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain Parvo_NS1 PF01057.12 gi|21227358|ref|NP_633280.1| - 0.00032 19.6 0.0 0.75 8.6 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.4 gi|21227358|ref|NP_633280.1| - 0.00035 19.6 0.0 0.44 9.4 0.0 2.4 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.10 gi|21227358|ref|NP_633280.1| - 0.00051 19.7 6.2 1.8 8.2 0.0 4.8 3 2 1 4 4 4 2 NTPase UPF0079 PF02367.12 gi|21227358|ref|NP_633280.1| - 0.00062 19.3 0.2 1.1 8.9 0.0 2.9 2 1 1 3 3 3 1 Uncharacterised P-loop hydrolase UPF0079 ResIII PF04851.10 gi|21227358|ref|NP_633280.1| - 0.0013 18.5 0.4 0.48 10.2 0.0 3.1 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit AFG1_ATPase PF03969.11 gi|21227358|ref|NP_633280.1| - 0.0015 17.4 0.0 0.6 8.8 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase Guanylate_kin PF00625.16 gi|21227358|ref|NP_633280.1| - 0.0018 17.7 0.5 3.9 6.8 0.0 4.3 4 1 1 5 5 3 0 Guanylate kinase KaiC PF06745.8 gi|21227358|ref|NP_633280.1| - 0.0021 17.2 6.8 1.6 7.7 0.0 4.4 3 2 1 5 5 5 1 KaiC Bac_DnaA PF00308.13 gi|21227358|ref|NP_633280.1| - 0.0032 17.1 0.0 2.2 7.8 0.0 2.8 2 1 0 2 2 2 1 Bacterial dnaA protein SKI PF01202.17 gi|21227358|ref|NP_633280.1| - 0.0033 17.3 3.7 1.4 8.7 0.0 3.3 3 0 0 3 3 3 1 Shikimate kinase Viral_helicase1 PF01443.13 gi|21227358|ref|NP_633280.1| - 0.0038 16.7 0.0 1.5 8.3 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Cytidylate_kin2 PF13189.1 gi|21227358|ref|NP_633280.1| - 0.0051 16.7 3.2 0.53 10.1 0.0 3.3 3 0 0 3 3 3 1 Cytidylate kinase-like family CPT PF07931.7 gi|21227358|ref|NP_633280.1| - 0.0074 15.9 0.0 1.1 8.8 0.0 2.9 3 0 0 3 3 3 1 Chloramphenicol phosphotransferase-like protein T2SE PF00437.15 gi|21227358|ref|NP_633280.1| - 0.013 14.4 0.0 3.8 6.3 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF1677 PF07911.8 gi|21227358|ref|NP_633280.1| - 0.018 15.2 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1677) KAP_NTPase PF07693.9 gi|21227358|ref|NP_633280.1| - 0.019 13.9 0.0 3.5 6.5 0.0 2.7 2 1 0 3 3 3 0 KAP family P-loop domain KTI12 PF08433.5 gi|21227358|ref|NP_633280.1| - 0.033 13.3 0.0 8.4 5.5 0.0 2.5 2 0 0 2 2 2 0 Chromatin associated protein KTI12 IPT PF01745.11 gi|21227358|ref|NP_633280.1| - 0.044 12.9 0.1 9.3 5.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase GIDA_assoc_3 PF13932.1 gi|21227358|ref|NP_633280.1| - 0.053 13.5 0.2 0.65 10.0 0.0 2.9 2 0 0 2 2 1 0 GidA associated domain 3 Torsin PF06309.6 gi|21227358|ref|NP_633280.1| - 0.068 13.0 0.0 4.4 7.2 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_23 PF13476.1 gi|21227358|ref|NP_633280.1| - 1.8 8.8 10.3 6.9 6.9 0.0 3.9 4 1 0 4 4 3 0 AAA domain HTH_5 PF01022.15 gi|21227359|ref|NP_633281.1| - 4.7e-16 58.1 0.2 8.9e-12 44.4 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227359|ref|NP_633281.1| - 1.9e-12 46.7 0.1 1.2e-09 37.8 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.2 gi|21227359|ref|NP_633281.1| - 1.9e-09 37.0 0.0 0.0017 17.9 0.0 2.4 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 gi|21227359|ref|NP_633281.1| - 9.5e-06 25.2 0.0 0.017 14.8 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|21227359|ref|NP_633281.1| - 1.6e-05 24.8 0.0 0.027 14.4 0.0 2.6 2 0 0 2 2 2 2 Winged helix DNA-binding domain LexA_DNA_bind PF01726.11 gi|21227359|ref|NP_633281.1| - 0.00046 19.6 0.0 0.17 11.4 0.0 2.6 2 0 0 2 2 2 1 LexA DNA binding domain HTH_Crp_2 PF13545.1 gi|21227359|ref|NP_633281.1| - 0.00073 19.2 1.1 0.22 11.3 0.0 3.1 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|21227359|ref|NP_633281.1| - 0.00084 18.6 1.6 0.012 14.9 0.1 3.0 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21227359|ref|NP_633281.1| - 0.00091 19.5 0.0 0.065 13.5 0.0 2.6 3 0 0 3 3 2 1 Winged helix DNA-binding domain MarR PF01047.17 gi|21227359|ref|NP_633281.1| - 0.0055 16.3 0.0 0.072 12.8 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.7 gi|21227359|ref|NP_633281.1| - 0.0059 16.2 0.4 0.018 14.7 0.0 2.0 2 0 0 2 2 2 1 HTH domain HTH_36 PF13730.1 gi|21227359|ref|NP_633281.1| - 0.019 15.1 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.9 gi|21227359|ref|NP_633281.1| - 0.025 14.3 0.0 3.2 7.5 0.0 3.1 3 1 0 3 3 3 0 Transcriptional regulator PadR-like family DUF742 PF05331.6 gi|21227359|ref|NP_633281.1| - 0.027 14.0 0.0 2 8.0 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_45 PF14947.1 gi|21227359|ref|NP_633281.1| - 0.029 14.1 0.0 0.52 10.1 0.0 2.6 2 1 1 3 3 3 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|21227359|ref|NP_633281.1| - 0.06 13.4 0.1 0.51 10.4 0.0 2.3 3 0 0 3 3 3 0 Transcriptional regulator DUF2513 PF10711.4 gi|21227359|ref|NP_633281.1| - 0.11 12.5 0.2 0.79 9.8 0.0 2.3 3 0 0 3 3 3 0 Hypothetical protein (DUF2513) Pep_M12B_propep PF01562.14 gi|21227360|ref|NP_633282.1| - 0.00055 19.7 0.1 0.0013 18.5 0.0 1.6 1 1 1 2 2 2 1 Reprolysin family propeptide CBM_4_9 PF02018.12 gi|21227360|ref|NP_633282.1| - 0.03 14.3 0.5 0.054 13.5 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain DnaB_C PF03796.10 gi|21227361|ref|NP_633283.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21227361|ref|NP_633283.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21227361|ref|NP_633283.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21227361|ref|NP_633283.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.9 gi|21227362|ref|NP_633284.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21227362|ref|NP_633284.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21227362|ref|NP_633284.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21227362|ref|NP_633284.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21227362|ref|NP_633284.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21227362|ref|NP_633284.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain DUF2072 PF09845.4 gi|21227363|ref|NP_633285.1| - 3.8e-48 162.7 0.1 4.6e-48 162.4 0.0 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein (DUF2072) AnfO_nitrog PF09582.5 gi|21227363|ref|NP_633285.1| - 0.0084 15.2 0.5 0.019 14.0 0.3 1.5 1 1 1 2 2 2 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) zf-ribbon_3 PF13248.1 gi|21227363|ref|NP_633285.1| - 0.016 14.3 1.3 2 7.7 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|21227363|ref|NP_633285.1| - 0.018 14.4 1.0 0.034 13.6 0.7 1.5 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|21227363|ref|NP_633285.1| - 0.1 11.9 1.3 1.3 8.4 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.5 gi|21227363|ref|NP_633285.1| - 0.86 9.6 3.1 5.8 6.9 2.1 2.1 1 1 0 1 1 1 0 Zinc ribbon domain UPF0547 PF10571.4 gi|21227363|ref|NP_633285.1| - 4.2 7.1 5.3 9.9 5.9 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Pribosyltran PF00156.22 gi|21227364|ref|NP_633286.1| - 6e-22 77.6 0.0 9.8e-22 76.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|21227364|ref|NP_633286.1| - 0.066 12.3 0.0 0.099 11.8 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF1724 PF08350.5 gi|21227365|ref|NP_633287.1| - 1.5e-23 82.1 0.5 5.7e-22 77.0 0.1 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|21227365|ref|NP_633287.1| - 0.0013 18.9 0.1 0.0032 17.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|21227365|ref|NP_633287.1| - 0.02 14.5 0.1 0.054 13.1 0.1 1.7 1 0 0 1 1 1 0 HTH domain HTH_45 PF14947.1 gi|21227365|ref|NP_633287.1| - 0.03 14.1 0.4 0.068 12.9 0.3 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix YopJ PF03421.11 gi|21227365|ref|NP_633287.1| - 0.069 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 YopJ Serine/Threonine acetyltransferase HTH_20 PF12840.2 gi|21227365|ref|NP_633287.1| - 0.08 12.7 0.0 0.22 11.3 0.0 1.7 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|21227365|ref|NP_633287.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Inhibitor_I42 PF09394.5 gi|21227367|ref|NP_633289.1| - 2.2e-16 59.9 0.1 2.4e-16 59.8 0.0 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 zf-FCS PF06467.9 gi|21227368|ref|NP_633290.1| - 0.047 13.3 3.5 0.047 13.3 2.4 1.8 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif DNA_ligase_IV PF11411.3 gi|21227368|ref|NP_633290.1| - 0.11 12.2 0.1 0.31 10.8 0.0 1.7 2 0 0 2 2 2 0 DNA ligase IV PMT_C PF11647.3 gi|21227368|ref|NP_633290.1| - 0.15 11.7 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 C-terminal region of Pasteurella multocida toxin residues 569-1285 zf-C4_ClpX PF06689.8 gi|21227368|ref|NP_633290.1| - 0.15 11.6 0.2 0.15 11.6 0.2 2.3 2 0 0 2 2 2 0 ClpX C4-type zinc finger DUF3795 PF12675.2 gi|21227368|ref|NP_633290.1| - 1.1 9.5 8.7 1.5 9.0 6.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) SRP54 PF00448.17 gi|21227369|ref|NP_633291.1| - 1.4e-71 240.0 0.4 2.2e-71 239.3 0.3 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|21227369|ref|NP_633291.1| - 6.4e-32 109.9 6.0 2.9e-31 107.7 2.4 2.7 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.14 gi|21227369|ref|NP_633291.1| - 5e-21 74.5 0.2 4.7e-17 61.8 0.0 2.8 2 0 0 2 2 2 2 SRP54-type protein, helical bundle domain CbiA PF01656.18 gi|21227369|ref|NP_633291.1| - 2.1e-05 24.0 0.7 0.00011 21.7 0.3 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.1 gi|21227369|ref|NP_633291.1| - 0.00022 21.1 0.0 0.00048 20.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.15 gi|21227369|ref|NP_633291.1| - 0.00022 20.8 0.0 0.00078 19.1 0.0 1.9 1 0 0 1 1 1 1 Adenylylsulphate kinase 6PF2K PF01591.13 gi|21227369|ref|NP_633291.1| - 0.00047 19.2 0.0 0.001 18.2 0.0 1.5 1 0 0 1 1 1 1 6-phosphofructo-2-kinase Zeta_toxin PF06414.7 gi|21227369|ref|NP_633291.1| - 0.00058 19.0 0.1 0.0012 17.9 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin MobB PF03205.9 gi|21227369|ref|NP_633291.1| - 0.00059 19.5 0.1 0.0014 18.3 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.14 gi|21227369|ref|NP_633291.1| - 0.0012 18.3 0.5 0.0086 15.5 0.3 2.3 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_31 PF13614.1 gi|21227369|ref|NP_633291.1| - 0.0026 17.7 0.0 0.7 9.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21227369|ref|NP_633291.1| - 0.0032 17.6 0.1 0.014 15.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|21227369|ref|NP_633291.1| - 0.0035 17.0 0.1 0.042 13.6 0.0 2.3 2 0 0 2 2 2 1 Part of AAA domain KTI12 PF08433.5 gi|21227369|ref|NP_633291.1| - 0.0044 16.2 0.0 0.0086 15.3 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ArgK PF03308.11 gi|21227369|ref|NP_633291.1| - 0.0048 15.7 0.0 0.017 13.9 0.0 1.8 2 0 0 2 2 2 1 ArgK protein AAA_17 PF13207.1 gi|21227369|ref|NP_633291.1| - 0.0067 17.2 0.1 0.018 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.12 gi|21227369|ref|NP_633291.1| - 0.0085 15.4 0.2 0.032 13.6 0.1 2.0 2 0 0 2 2 2 1 Thymidylate kinase AAA_16 PF13191.1 gi|21227369|ref|NP_633291.1| - 0.0089 16.0 0.0 0.018 14.9 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain DUF1611 PF07755.6 gi|21227369|ref|NP_633291.1| - 0.02 13.5 0.3 0.033 12.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1611) ATP_bind_1 PF03029.12 gi|21227369|ref|NP_633291.1| - 0.055 12.9 0.5 0.28 10.6 0.0 2.3 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein TrwB_AAD_bind PF10412.4 gi|21227369|ref|NP_633291.1| - 0.072 11.6 0.1 0.13 10.8 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Spectrin PF00435.16 gi|21227369|ref|NP_633291.1| - 0.075 13.3 0.6 14 6.0 0.0 2.9 3 0 0 3 3 2 0 Spectrin repeat AAA_10 PF12846.2 gi|21227369|ref|NP_633291.1| - 0.1 12.0 0.4 0.14 11.5 0.3 1.5 1 1 0 1 1 1 0 AAA-like domain NACHT PF05729.7 gi|21227369|ref|NP_633291.1| - 0.11 12.1 0.1 0.2 11.2 0.1 1.4 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.17 gi|21227369|ref|NP_633291.1| - 0.16 10.7 1.8 3 6.6 0.1 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.9 gi|21227369|ref|NP_633291.1| - 0.18 11.5 1.5 1.5 8.5 0.1 2.8 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.1 gi|21227369|ref|NP_633291.1| - 0.21 11.5 0.6 0.94 9.4 0.2 2.2 1 1 1 2 2 2 0 AAA domain VESA1_N PF12785.2 gi|21227370|ref|NP_633292.1| - 0.0037 16.3 0.2 1.1 8.1 0.0 2.0 1 1 1 2 2 2 2 Variant erythrocyte surface antigen-1 DUF4046 PF13255.1 gi|21227371|ref|NP_633293.1| - 0.018 13.8 1.7 0.024 13.3 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) GATase PF00117.23 gi|21227372|ref|NP_633294.1| - 1.2e-40 139.0 0.0 1.3e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21227372|ref|NP_633294.1| - 5.3e-13 48.9 0.3 9.4e-12 44.8 0.1 2.4 2 1 0 2 2 2 1 Peptidase C26 DeoC PF01791.4 gi|21227373|ref|NP_633295.1| - 7.2e-59 198.9 0.0 8.4e-59 198.7 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 gi|21227373|ref|NP_633295.1| - 0.082 12.1 0.4 2.4 7.3 0.0 2.8 1 1 2 3 3 3 0 Phosphoenolpyruvate phosphomutase OMPdecase PF00215.19 gi|21227373|ref|NP_633295.1| - 0.085 12.2 0.1 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHQS PF01959.11 gi|21227374|ref|NP_633296.1| - 3.2e-153 509.5 1.5 3.7e-153 509.3 1.1 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) DUF2577 PF10844.3 gi|21227374|ref|NP_633296.1| - 0.0083 16.1 0.1 9 6.4 0.0 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF2577) Peripla_BP_4 PF13407.1 gi|21227374|ref|NP_633296.1| - 0.011 15.0 0.6 2.4 7.4 0.0 2.7 3 0 0 3 3 3 0 Periplasmic binding protein domain QRPTase_C PF01729.14 gi|21227374|ref|NP_633296.1| - 0.015 14.8 0.2 0.041 13.4 0.1 1.7 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Response_reg PF00072.19 gi|21227374|ref|NP_633296.1| - 0.057 13.4 0.0 0.52 10.3 0.0 2.3 2 0 0 2 2 2 0 Response regulator receiver domain DHquinase_I PF01487.10 gi|21227375|ref|NP_633297.1| - 5.4e-60 202.8 0.0 6.6e-60 202.5 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.14 gi|21227375|ref|NP_633297.1| - 0.0033 17.1 0.1 0.91 9.1 0.0 2.3 2 0 0 2 2 2 2 HMGL-like Shikimate_dh_N PF08501.6 gi|21227376|ref|NP_633298.1| - 7.7e-25 86.7 0.0 1.6e-24 85.7 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|21227376|ref|NP_633298.1| - 8.2e-15 55.0 0.1 1.2e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.14 gi|21227376|ref|NP_633298.1| - 0.0003 20.0 0.2 0.0014 17.8 0.1 2.1 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|21227376|ref|NP_633298.1| - 0.00073 19.5 0.5 0.0013 18.7 0.4 1.5 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_7 PF13241.1 gi|21227376|ref|NP_633298.1| - 0.005 17.0 0.1 0.0077 16.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|21227376|ref|NP_633298.1| - 0.0099 15.8 0.4 0.019 14.9 0.3 1.5 1 1 0 1 1 1 1 TrkA-N domain ApbA PF02558.11 gi|21227376|ref|NP_633298.1| - 0.02 14.3 0.4 0.042 13.3 0.2 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Saccharop_dh PF03435.13 gi|21227376|ref|NP_633298.1| - 0.027 13.4 0.2 0.037 13.0 0.2 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase Ldh_1_N PF00056.18 gi|21227376|ref|NP_633298.1| - 0.029 14.2 0.1 0.054 13.3 0.1 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PDH PF02153.12 gi|21227377|ref|NP_633299.1| - 1.9e-52 177.7 0.0 2.4e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.10 gi|21227377|ref|NP_633299.1| - 4.8e-09 36.2 0.0 8.8e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|21227377|ref|NP_633299.1| - 7.8e-07 28.4 0.1 2.3e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|21227377|ref|NP_633299.1| - 1.2e-06 28.8 0.0 3.4e-06 27.3 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|21227377|ref|NP_633299.1| - 0.0014 18.3 1.3 0.047 13.4 0.9 2.6 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|21227377|ref|NP_633299.1| - 0.0067 15.8 0.1 0.023 14.1 0.0 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Epimerase PF01370.16 gi|21227377|ref|NP_633299.1| - 0.0097 15.3 0.0 0.015 14.7 0.0 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.8 gi|21227377|ref|NP_633299.1| - 0.022 14.0 0.0 0.054 12.7 0.0 1.7 2 0 0 2 2 2 0 NmrA-like family CoA_binding PF02629.14 gi|21227377|ref|NP_633299.1| - 0.035 14.5 0.3 0.12 12.8 0.1 2.1 2 0 0 2 2 1 0 CoA binding domain FDX-ACB PF03147.9 gi|21227377|ref|NP_633299.1| - 0.041 14.0 0.0 0.082 13.0 0.0 1.5 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain NAD_binding_10 PF13460.1 gi|21227377|ref|NP_633299.1| - 0.075 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 NADH(P)-binding 3HCDH_N PF02737.13 gi|21227377|ref|NP_633299.1| - 0.081 12.5 0.1 11 5.6 0.0 2.3 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HEAT_2 PF13646.1 gi|21227378|ref|NP_633300.1| - 2.5e-50 168.6 7.6 3.1e-13 49.7 0.1 6.6 2 2 3 5 5 5 5 HEAT repeats HEAT_PBS PF03130.11 gi|21227378|ref|NP_633300.1| - 6.3e-39 128.4 1.0 0.0009 19.4 0.0 10.8 10 0 0 10 10 10 7 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|21227378|ref|NP_633300.1| - 3.7e-11 43.1 8.3 0.0013 19.1 0.1 7.5 4 3 4 8 8 8 4 HEAT-like repeat HEAT PF02985.17 gi|21227378|ref|NP_633300.1| - 8e-11 41.0 0.0 0.39 10.9 0.0 6.7 8 0 0 8 8 8 3 HEAT repeat Vitellogenin_N PF01347.17 gi|21227378|ref|NP_633300.1| - 3e-06 25.7 0.0 0.0071 14.6 0.0 2.5 1 1 1 2 2 2 2 Lipoprotein amino terminal region Cnd1 PF12717.2 gi|21227378|ref|NP_633300.1| - 0.024 14.4 0.2 1.6 8.5 0.0 3.7 4 1 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 Arm PF00514.18 gi|21227378|ref|NP_633300.1| - 0.028 14.2 0.1 65 3.5 0.0 4.8 4 0 0 4 4 4 0 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|21227378|ref|NP_633300.1| - 0.067 11.4 0.1 0.8 7.9 0.0 2.3 1 1 1 2 2 2 0 Adaptin N terminal region Nipped-B_C PF12830.2 gi|21227378|ref|NP_633300.1| - 0.091 12.3 0.1 0.19 11.3 0.1 1.5 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus A2M_comp PF07678.9 gi|21227378|ref|NP_633300.1| - 0.1 11.8 0.5 0.54 9.4 0.0 2.2 2 1 0 2 2 2 0 A-macroglobulin complement component Methyltransf_11 PF08241.7 gi|21227379|ref|NP_633301.1| - 8.9e-25 87.0 0.0 1.4e-24 86.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227379|ref|NP_633301.1| - 1.5e-22 79.8 0.0 2e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21227379|ref|NP_633301.1| - 2.4e-16 59.5 0.0 5e-16 58.5 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|21227379|ref|NP_633301.1| - 3.8e-16 59.2 0.0 5e-16 58.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227379|ref|NP_633301.1| - 1.8e-15 57.0 0.0 2.9e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227379|ref|NP_633301.1| - 2.3e-15 57.1 0.0 4.2e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227379|ref|NP_633301.1| - 2.1e-13 50.6 0.0 3.3e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21227379|ref|NP_633301.1| - 8.9e-11 41.8 0.0 2e-10 40.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21227379|ref|NP_633301.1| - 1.7e-08 34.0 0.0 2.8e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.6 gi|21227379|ref|NP_633301.1| - 8e-06 25.3 0.0 1.5e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Nodulation protein S (NodS) RrnaAD PF00398.15 gi|21227379|ref|NP_633301.1| - 2.2e-05 23.6 0.0 3.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.8 gi|21227379|ref|NP_633301.1| - 0.00011 21.4 0.0 0.00016 20.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.7 gi|21227379|ref|NP_633301.1| - 0.00041 19.3 0.0 0.00062 18.7 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase TehB PF03848.9 gi|21227379|ref|NP_633301.1| - 0.0014 17.7 0.0 0.0025 16.9 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB PCMT PF01135.14 gi|21227379|ref|NP_633301.1| - 0.004 16.7 0.0 0.011 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.7 gi|21227379|ref|NP_633301.1| - 0.0042 16.4 0.0 0.018 14.4 0.0 1.8 1 1 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.1 gi|21227379|ref|NP_633301.1| - 0.0099 15.5 0.0 0.014 15.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.6 gi|21227379|ref|NP_633301.1| - 0.011 14.4 0.0 0.016 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) GidB PF02527.10 gi|21227379|ref|NP_633301.1| - 0.012 14.7 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G UPF0020 PF01170.13 gi|21227379|ref|NP_633301.1| - 0.014 15.0 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_15 PF09445.5 gi|21227379|ref|NP_633301.1| - 0.017 14.6 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase 3HCDH_N PF02737.13 gi|21227379|ref|NP_633301.1| - 0.14 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TIM PF00121.13 gi|21227380|ref|NP_633302.1| - 1.5e-29 102.7 0.2 4.3e-20 71.8 0.0 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase ThiG PF05690.9 gi|21227380|ref|NP_633302.1| - 0.00013 21.0 0.2 0.00031 19.8 0.2 1.6 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|21227380|ref|NP_633302.1| - 0.0023 17.1 0.4 0.0035 16.5 0.3 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.13 gi|21227380|ref|NP_633302.1| - 0.0049 15.7 0.9 0.036 12.9 0.2 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase Hydrolase_like PF13242.1 gi|21227380|ref|NP_633302.1| - 0.0058 16.3 0.1 3.7 7.3 0.0 2.3 2 0 0 2 2 2 2 HAD-hyrolase-like IGPS PF00218.16 gi|21227380|ref|NP_633302.1| - 0.0098 14.9 0.0 0.025 13.6 0.0 1.7 1 1 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.16 gi|21227380|ref|NP_633302.1| - 0.022 14.0 0.1 0.14 11.4 0.0 2.0 2 0 0 2 2 2 0 Histidine biosynthesis protein Fae PF08714.6 gi|21227381|ref|NP_633303.1| - 7.5e-73 243.5 0.1 1.6e-72 242.4 0.1 1.6 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.19 gi|21227381|ref|NP_633303.1| - 1.7e-21 76.6 2.8 2e-20 73.2 1.9 2.2 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.14 gi|21227381|ref|NP_633303.1| - 0.0001 21.4 1.4 0.00043 19.4 1.0 2.1 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Cas_csx3 PF09620.5 gi|21227381|ref|NP_633303.1| - 0.004 16.9 0.1 1.5 8.6 0.0 2.6 1 1 1 2 2 2 2 CRISPR-associated protein (Cas_csx3) PcrB PF01884.12 gi|21227381|ref|NP_633303.1| - 0.0092 15.2 2.0 0.014 14.7 0.3 1.9 2 0 0 2 2 2 1 PcrB family QRPTase_C PF01729.14 gi|21227381|ref|NP_633303.1| - 0.014 14.8 0.2 0.028 13.9 0.1 1.6 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain HhH-GPD PF00730.20 gi|21227382|ref|NP_633304.1| - 3.3e-23 82.0 0.0 4.4e-23 81.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|21227382|ref|NP_633304.1| - 1.5e-10 40.1 0.4 1.7e-09 36.8 0.0 2.8 4 0 0 4 4 4 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|21227382|ref|NP_633304.1| - 0.0003 20.8 0.1 0.0015 18.6 0.1 2.0 1 1 0 1 1 1 1 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.4 gi|21227382|ref|NP_633304.1| - 0.00032 20.7 3.2 0.00032 20.7 2.2 1.8 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_2 PF12826.2 gi|21227382|ref|NP_633304.1| - 0.0012 18.7 0.0 0.42 10.5 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif Yip1 PF04893.12 gi|21227383|ref|NP_633305.1| - 2.3e-24 85.7 19.3 2.3e-24 85.7 13.4 1.3 1 1 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|21227383|ref|NP_633305.1| - 0.0083 15.7 18.7 0.031 13.9 12.6 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) Sdh5 PF03937.11 gi|21227384|ref|NP_633306.1| - 0.004 16.8 0.0 0.022 14.4 0.0 1.9 2 0 0 2 2 2 1 Flavinator of succinate dehydrogenase GRIM-19 PF06212.7 gi|21227384|ref|NP_633306.1| - 0.14 11.8 0.0 1.4 8.6 0.0 2.0 1 1 1 2 2 2 0 GRIM-19 protein Ferritin PF00210.19 gi|21227385|ref|NP_633307.1| - 1.1e-33 116.0 2.8 1.2e-33 115.8 1.9 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 gi|21227385|ref|NP_633307.1| - 2.4e-05 24.7 3.0 3.3e-05 24.2 2.0 1.3 1 0 0 1 1 1 1 Rubrerythrin DUF892 PF05974.7 gi|21227385|ref|NP_633307.1| - 0.00019 21.2 0.7 0.00033 20.4 0.0 1.7 2 1 0 2 2 2 1 Domain of unknown function (DUF892) Phenol_Hydrox PF02332.13 gi|21227385|ref|NP_633307.1| - 0.012 14.8 0.1 0.036 13.3 0.0 1.7 2 0 0 2 2 2 0 Methane/Phenol/Toluene Hydroxylase Hypoth_Ymh PF09509.5 gi|21227385|ref|NP_633307.1| - 0.031 13.8 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) HMGL-like PF00682.14 gi|21227386|ref|NP_633308.1| - 1.2e-77 260.7 0.9 2.3e-77 259.8 0.6 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|21227386|ref|NP_633308.1| - 8.7e-36 122.6 1.1 2.4e-35 121.2 0.8 1.8 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TatD_DNase PF01026.16 gi|21227387|ref|NP_633309.1| - 4.7e-65 219.3 0.0 5.4e-65 219.1 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.9 gi|21227387|ref|NP_633309.1| - 1.4e-06 28.0 0.1 2.5e-06 27.2 0.1 1.6 1 1 0 1 1 1 1 Amidohydrolase AP_endonuc_2 PF01261.19 gi|21227387|ref|NP_633309.1| - 0.053 12.7 0.3 0.099 11.9 0.2 1.7 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel Amidohydro_4 PF13147.1 gi|21227387|ref|NP_633309.1| - 0.099 12.6 0.0 1.4 8.9 0.0 2.2 1 1 0 1 1 1 0 Amidohydrolase Lactamase_B PF00753.22 gi|21227388|ref|NP_633310.1| - 1.1e-26 93.7 0.2 1.3e-26 93.5 0.1 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21227388|ref|NP_633310.1| - 1.4e-05 24.7 0.0 2e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Radical_SAM_N PF08497.5 gi|21227389|ref|NP_633311.1| - 1.8e-130 434.2 0.0 2.4e-130 433.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal Radical_SAM PF04055.16 gi|21227389|ref|NP_633311.1| - 5.6e-19 68.9 1.5 7e-18 65.3 0.2 2.6 3 0 0 3 3 3 1 Radical SAM superfamily DUF3362 PF11842.3 gi|21227389|ref|NP_633311.1| - 1.1e-15 57.8 0.1 2.2e-15 56.8 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) B12-binding PF02310.14 gi|21227389|ref|NP_633311.1| - 0.00019 21.2 0.0 0.43 10.4 0.0 3.7 4 1 0 4 4 4 2 B12 binding domain ELFV_dehydrog PF00208.16 gi|21227389|ref|NP_633311.1| - 0.13 11.8 0.1 0.29 10.6 0.0 1.5 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Serglycin PF04360.7 gi|21227391|ref|NP_633313.1| - 0.033 13.9 0.0 0.038 13.7 0.0 1.1 1 0 0 1 1 1 0 Serglycin CCG PF02754.11 gi|21227392|ref|NP_633314.1| - 1.5e-35 121.0 1.2 1.4e-16 60.2 0.1 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|21227392|ref|NP_633314.1| - 1.4e-11 44.2 4.7 1.4e-11 44.2 3.2 2.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227392|ref|NP_633314.1| - 1.1e-10 41.6 3.2 1.1e-10 41.6 2.2 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227392|ref|NP_633314.1| - 3.4e-07 29.9 6.2 3.4e-07 29.9 4.3 2.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227392|ref|NP_633314.1| - 7.6e-07 29.7 9.8 0.0025 18.5 0.5 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|21227392|ref|NP_633314.1| - 1.9e-05 24.9 10.6 1.9e-05 24.9 7.4 2.7 3 1 2 5 5 4 3 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227392|ref|NP_633314.1| - 3.5e-05 23.9 18.0 0.0013 18.9 0.7 3.8 4 1 1 5 5 5 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21227392|ref|NP_633314.1| - 0.00033 21.0 16.4 0.0027 18.0 1.1 3.8 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227392|ref|NP_633314.1| - 0.00036 20.2 2.0 0.00036 20.2 1.4 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4 PF00037.22 gi|21227392|ref|NP_633314.1| - 0.0014 18.1 25.7 0.0024 17.4 2.6 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain UPF0004 PF00919.15 gi|21227392|ref|NP_633314.1| - 0.002 17.9 0.0 1.5 8.6 0.0 3.2 2 1 1 3 3 3 1 Uncharacterized protein family UPF0004 Fer4_21 PF14697.1 gi|21227392|ref|NP_633314.1| - 0.0021 17.8 14.7 0.0097 15.7 0.5 3.7 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227392|ref|NP_633314.1| - 0.021 15.1 3.2 0.021 15.1 2.2 3.9 4 0 0 4 4 3 0 4Fe-4S binding domain Eapp_C PF10238.4 gi|21227392|ref|NP_633314.1| - 0.27 11.1 4.0 1 9.2 1.8 2.4 2 0 0 2 2 2 0 E2F-associated phosphoprotein Fer4_15 PF13459.1 gi|21227392|ref|NP_633314.1| - 0.43 11.1 9.4 5.4 7.6 0.1 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain Fer4_6 PF12837.2 gi|21227392|ref|NP_633314.1| - 2.7 8.0 27.6 0.14 12.0 2.2 3.4 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21227392|ref|NP_633314.1| - 3.6 8.0 15.6 0.3 11.5 0.4 3.1 3 0 0 3 3 2 0 4Fe-4S single cluster domain FAD-oxidase_C PF02913.14 gi|21227393|ref|NP_633315.1| - 3e-56 190.5 0.0 3.8e-56 190.1 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.18 gi|21227393|ref|NP_633315.1| - 8.4e-47 158.1 0.1 1.5e-46 157.3 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain TGT PF01702.13 gi|21227394|ref|NP_633316.1| - 1.5e-24 86.5 0.0 5e-24 84.8 0.0 1.7 2 0 0 2 2 2 1 Queuine tRNA-ribosyltransferase TGT_C2 PF14810.1 gi|21227394|ref|NP_633316.1| - 2.9e-14 52.6 0.0 7.7e-14 51.2 0.0 1.7 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|21227394|ref|NP_633316.1| - 3.7e-14 52.2 0.3 7.6e-14 51.1 0.2 1.5 1 0 0 1 1 1 1 PUA domain Acetyltransf_1 PF00583.19 gi|21227395|ref|NP_633317.1| - 5.1e-20 71.2 0.7 7.8e-20 70.7 0.5 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|21227395|ref|NP_633317.1| - 9.8e-13 48.2 0.0 1.3e-12 47.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|21227395|ref|NP_633317.1| - 2.7e-12 46.6 0.4 4.9e-12 45.8 0.3 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21227395|ref|NP_633317.1| - 1.8e-09 37.2 0.1 2.7e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.1 gi|21227395|ref|NP_633317.1| - 2.2e-09 37.4 0.1 3.7e-09 36.7 0.1 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227395|ref|NP_633317.1| - 6.4e-09 35.7 0.1 2e-08 34.1 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21227395|ref|NP_633317.1| - 3.4e-08 33.7 0.3 1e-07 32.2 0.2 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21227395|ref|NP_633317.1| - 4.5e-07 29.8 0.0 1.1e-06 28.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21227395|ref|NP_633317.1| - 3.9e-05 23.4 0.1 7e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF1999 PF09390.5 gi|21227395|ref|NP_633317.1| - 0.037 13.3 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) Acetyltransf_6 PF13480.1 gi|21227395|ref|NP_633317.1| - 0.04 13.8 0.1 0.065 13.1 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain UPF0058 PF01893.11 gi|21227396|ref|NP_633318.1| - 7.5e-32 109.2 1.6 8.2e-32 109.1 1.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 Toprim_4 PF13662.1 gi|21227397|ref|NP_633319.1| - 1.4e-08 34.5 0.2 4.7e-08 32.9 0.1 1.9 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|21227397|ref|NP_633319.1| - 0.0092 15.9 0.1 0.046 13.6 0.0 2.2 1 1 0 1 1 1 1 Toprim domain Rdx PF10262.4 gi|21227397|ref|NP_633319.1| - 0.1 12.6 0.0 0.73 9.9 0.0 2.2 2 0 0 2 2 2 0 Rdx family Pyr_redox_2 PF07992.9 gi|21227398|ref|NP_633320.1| - 2.1e-27 96.3 0.4 2.2e-14 53.8 0.0 4.1 2 1 1 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|21227398|ref|NP_633320.1| - 2.8e-22 78.9 8.9 3.9e-18 65.6 0.1 3.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|21227398|ref|NP_633320.1| - 9e-13 48.2 0.0 2e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.19 gi|21227398|ref|NP_633320.1| - 9.6e-13 47.7 1.5 0.00041 19.3 0.3 4.1 4 0 0 4 4 4 3 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21227398|ref|NP_633320.1| - 6.6e-09 35.1 0.5 0.0078 15.0 0.0 3.2 3 0 0 3 3 3 3 FAD binding domain Pyr_redox_3 PF13738.1 gi|21227398|ref|NP_633320.1| - 1.6e-08 34.8 0.0 0.00012 22.1 0.0 2.7 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|21227398|ref|NP_633320.1| - 3.5e-08 32.3 0.1 0.071 11.5 0.0 3.6 4 0 0 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.1 gi|21227398|ref|NP_633320.1| - 4.3e-08 33.0 0.2 0.0046 16.9 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|21227398|ref|NP_633320.1| - 6.1e-07 28.6 0.1 0.00036 19.5 0.0 3.1 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.14 gi|21227398|ref|NP_633320.1| - 4e-06 26.1 0.4 0.0011 18.0 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_7 PF13241.1 gi|21227398|ref|NP_633320.1| - 2.3e-05 24.6 0.1 0.061 13.5 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding Thi4 PF01946.12 gi|21227398|ref|NP_633320.1| - 0.00019 20.6 0.4 0.29 10.2 0.0 2.7 3 0 0 3 3 3 2 Thi4 family NAD_binding_9 PF13454.1 gi|21227398|ref|NP_633320.1| - 0.00044 20.0 0.8 1.9 8.2 0.0 4.0 4 0 0 4 4 4 1 FAD-NAD(P)-binding K_oxygenase PF13434.1 gi|21227398|ref|NP_633320.1| - 0.00045 19.2 0.0 0.011 14.7 0.0 2.4 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) ApbA PF02558.11 gi|21227398|ref|NP_633320.1| - 0.00064 19.1 0.1 0.022 14.2 0.0 2.4 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.13 gi|21227398|ref|NP_633320.1| - 0.00095 18.8 0.1 0.016 14.8 0.0 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.9 gi|21227398|ref|NP_633320.1| - 0.0019 16.8 0.3 0.2 10.2 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase NAD_Gly3P_dh_N PF01210.18 gi|21227398|ref|NP_633320.1| - 0.0026 17.5 0.1 1.9 8.1 0.0 2.5 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amino_oxidase PF01593.19 gi|21227398|ref|NP_633320.1| - 0.0028 16.8 0.0 0.0056 15.8 0.0 1.4 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.7 gi|21227398|ref|NP_633320.1| - 0.0036 16.2 0.1 1 8.1 0.0 2.4 2 1 0 2 2 2 1 Lycopene cyclase protein 2-Hacid_dh_C PF02826.14 gi|21227398|ref|NP_633320.1| - 0.005 16.0 1.0 2.6 7.1 0.2 2.5 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|21227398|ref|NP_633320.1| - 0.0068 16.4 0.2 1.6 8.7 0.0 2.5 2 0 0 2 2 2 1 TrkA-N domain Shikimate_DH PF01488.15 gi|21227398|ref|NP_633320.1| - 0.0069 16.4 0.0 2 8.5 0.0 2.5 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.2 gi|21227398|ref|NP_633320.1| - 0.012 14.7 1.7 0.21 10.6 0.2 2.3 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_10 PF13460.1 gi|21227398|ref|NP_633320.1| - 0.014 15.3 0.2 0.29 11.1 0.1 2.4 2 0 0 2 2 2 0 NADH(P)-binding CPSase_L_chain PF00289.17 gi|21227398|ref|NP_633320.1| - 0.015 15.4 0.1 0.19 11.8 0.0 2.4 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain AlaDh_PNT_C PF01262.16 gi|21227398|ref|NP_633320.1| - 0.015 14.8 0.1 3.2 7.3 0.0 2.5 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain ThiF PF00899.16 gi|21227398|ref|NP_633320.1| - 0.029 14.1 1.3 0.57 9.9 0.2 2.3 2 0 0 2 2 2 0 ThiF family UDPG_MGDP_dh_N PF03721.9 gi|21227398|ref|NP_633320.1| - 0.1 11.9 0.8 0.8 9.0 0.1 2.2 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Saccharop_dh PF03435.13 gi|21227398|ref|NP_633320.1| - 0.12 11.2 0.5 0.38 9.6 0.0 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase RTC PF01137.16 gi|21227399|ref|NP_633321.1| - 6.9e-95 316.1 0.0 7.9e-95 315.9 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.8 gi|21227399|ref|NP_633321.1| - 2.2e-22 79.0 0.1 4.4e-22 78.0 0.1 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain PTS_2-RNA PF01885.11 gi|21227400|ref|NP_633322.1| - 4e-38 130.6 0.0 4.9e-38 130.3 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Phlebovirus_G1 PF07243.6 gi|21227400|ref|NP_633322.1| - 0.0035 15.5 0.0 0.0044 15.2 0.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 tRNA_anti-codon PF01336.20 gi|21227401|ref|NP_633323.1| - 3e-32 110.2 12.9 1.3e-07 31.3 0.1 4.4 4 0 0 4 4 4 4 OB-fold nucleic acid binding domain Rep_fac-A_C PF08646.5 gi|21227401|ref|NP_633323.1| - 3.6e-05 23.4 1.4 5.3 6.7 0.0 4.1 4 0 0 4 4 4 3 Replication factor-A C terminal domain DUF3127 PF11325.3 gi|21227401|ref|NP_633323.1| - 0.011 15.7 1.8 7 6.7 0.0 4.3 4 0 0 4 4 4 0 Domain of unknown function (DUF3127) T2SS-T3SS_pil_N PF13629.1 gi|21227401|ref|NP_633323.1| - 0.064 12.7 3.7 19 4.8 0.0 4.1 4 0 0 4 4 4 0 Pilus formation protein N terminal region DUF4277 PF14104.1 gi|21227402|ref|NP_633324.1| - 7.2e-41 138.9 0.0 1.6e-40 137.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21227402|ref|NP_633324.1| - 4.3e-10 39.4 0.1 5.2e-09 35.9 0.0 2.2 1 1 0 1 1 1 1 Transposase DDE domain CBS PF00571.23 gi|21227403|ref|NP_633325.1| - 1.5e-22 79.0 4.2 1.2e-12 47.4 0.2 2.2 2 0 0 2 2 2 2 CBS domain CBS PF00571.23 gi|21227404|ref|NP_633326.1| - 2e-50 168.3 8.5 1.1e-13 50.6 0.0 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.23 gi|21227405|ref|NP_633327.1| - 4.1e-56 186.5 3.5 1.3e-16 60.1 0.1 4.3 4 0 0 4 4 4 4 CBS domain CBS PF00571.23 gi|21227406|ref|NP_633328.1| - 2.9e-49 164.5 16.4 1.4e-12 47.1 0.5 4.1 4 0 0 4 4 4 4 CBS domain PduV-EutP PF10662.4 gi|21227406|ref|NP_633328.1| - 0.015 14.7 0.2 2.6 7.5 0.1 2.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation CBS PF00571.23 gi|21227407|ref|NP_633329.1| - 2.5e-46 155.2 9.2 1.9e-13 49.9 0.1 4.1 4 0 0 4 4 4 4 CBS domain AIM24 PF01987.12 gi|21227408|ref|NP_633330.1| - 5.2e-68 228.7 0.6 6e-68 228.5 0.4 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DNA_ligase_A_M PF01068.16 gi|21227409|ref|NP_633331.1| - 7.7e-25 87.4 0.1 2.2e-24 85.9 0.0 1.7 1 1 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.5 gi|21227409|ref|NP_633331.1| - 1.5e-07 31.3 0.1 1.6e-06 28.0 0.1 2.2 1 1 0 1 1 1 1 RNA ligase TusA PF01206.12 gi|21227409|ref|NP_633331.1| - 0.0077 15.8 0.0 0.36 10.4 0.0 2.8 2 0 0 2 2 2 1 Sulfurtransferase TusA DDE_Tnp_1_6 PF13751.1 gi|21227410|ref|NP_633332.1| - 2.6e-29 101.7 2.0 8.1e-29 100.1 1.0 2.2 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|21227410|ref|NP_633332.1| - 1.1e-19 70.7 0.2 2.5e-19 69.6 0.1 1.7 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.6 gi|21227410|ref|NP_633332.1| - 4.3e-18 64.9 0.1 1.5e-17 63.2 0.0 2.0 2 0 0 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.1 gi|21227410|ref|NP_633332.1| - 0.0033 17.5 0.1 0.14 12.3 0.0 2.8 2 0 0 2 2 2 1 Transposase DDE domain GTP_EFTU_D4 PF14578.1 gi|21227411|ref|NP_633333.1| - 0.0022 17.5 1.1 0.015 14.9 0.5 2.4 2 1 0 2 2 2 1 Elongation factor Tu domain 4 F420_oxidored PF03807.12 gi|21227411|ref|NP_633333.1| - 0.011 16.1 0.0 0.042 14.2 0.0 2.0 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent GTP_EFTU PF00009.22 gi|21227411|ref|NP_633333.1| - 0.019 14.3 0.1 0.079 12.3 0.1 1.9 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Sarcoglycan_1 PF04790.8 gi|21227411|ref|NP_633333.1| - 0.06 12.5 0.1 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein AIG2 PF06094.7 gi|21227412|ref|NP_633334.1| - 2.8e-09 37.4 0.1 4e-09 36.9 0.1 1.2 1 0 0 1 1 1 1 AIG2-like family AP_endonuc_2 PF01261.19 gi|21227413|ref|NP_633335.1| - 4.6e-35 120.8 0.0 5.5e-35 120.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Ribonuc_P_40 PF08584.6 gi|21227413|ref|NP_633335.1| - 0.064 12.2 0.0 0.092 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease P 40kDa (Rpp40) subunit RNA_binding PF01877.12 gi|21227414|ref|NP_633336.1| - 8.4e-24 83.8 0.0 1e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 RNA binding DUF668 PF05003.7 gi|21227414|ref|NP_633336.1| - 0.12 12.5 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF668) AAA_18 PF13238.1 gi|161485677|ref|NP_633337.2| - 2.6e-16 60.1 0.1 3.9e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|161485677|ref|NP_633337.2| - 9.4e-12 45.8 0.0 1.6e-11 45.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|161485677|ref|NP_633337.2| - 7.7e-06 25.8 0.0 1.1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|161485677|ref|NP_633337.2| - 5.4e-05 22.3 0.0 6.6e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin ADK PF00406.17 gi|161485677|ref|NP_633337.2| - 0.0018 18.1 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Adenylate kinase KTI12 PF08433.5 gi|161485677|ref|NP_633337.2| - 0.048 12.8 0.0 0.16 11.1 0.0 2.0 1 1 0 1 1 1 0 Chromatin associated protein KTI12 Cdc6_C PF09079.6 gi|21227416|ref|NP_633338.1| - 8.8e-28 95.8 0.4 2.3e-27 94.5 0.3 1.7 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|21227416|ref|NP_633338.1| - 3e-13 50.0 0.0 7.3e-13 48.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21227416|ref|NP_633338.1| - 4e-10 39.9 0.4 9.8e-09 35.4 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|21227416|ref|NP_633338.1| - 3.1e-09 37.1 0.0 7.9e-09 35.8 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|21227416|ref|NP_633338.1| - 1.4e-08 34.7 0.1 3.1e-08 33.5 0.1 1.5 1 0 0 1 1 1 1 Archaeal ATPase KAP_NTPase PF07693.9 gi|21227416|ref|NP_633338.1| - 3.1e-05 23.1 1.0 0.015 14.2 0.0 2.2 1 1 1 2 2 2 2 KAP family P-loop domain DEAD PF00270.24 gi|21227416|ref|NP_633338.1| - 6.9e-05 22.3 0.6 0.7 9.3 0.0 3.2 3 0 0 3 3 3 2 DEAD/DEAH box helicase NACHT PF05729.7 gi|21227416|ref|NP_633338.1| - 0.00017 21.3 0.0 0.00037 20.1 0.0 1.6 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.21 gi|21227416|ref|NP_633338.1| - 0.0005 19.5 0.0 0.0011 18.4 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain DUF2075 PF09848.4 gi|21227416|ref|NP_633338.1| - 0.00067 18.7 0.0 0.00099 18.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.8 gi|21227416|ref|NP_633338.1| - 0.0008 18.4 0.2 0.006 15.5 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) RuvB_N PF05496.7 gi|21227416|ref|NP_633338.1| - 0.0012 17.9 0.4 0.019 14.0 0.0 2.5 3 0 0 3 3 3 1 Holliday junction DNA helicase ruvB N-terminus Bac_DnaA PF00308.13 gi|21227416|ref|NP_633338.1| - 0.0022 17.6 0.3 0.019 14.5 0.2 2.1 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_17 PF13207.1 gi|21227416|ref|NP_633338.1| - 0.0024 18.6 0.3 0.0066 17.2 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21227416|ref|NP_633338.1| - 0.0028 17.9 0.5 0.0098 16.1 0.1 2.1 1 1 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|21227416|ref|NP_633338.1| - 0.0049 15.7 0.1 0.0074 15.1 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain AAA_24 PF13479.1 gi|21227416|ref|NP_633338.1| - 0.0093 15.5 0.2 0.019 14.5 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.9 gi|21227416|ref|NP_633338.1| - 0.014 15.2 0.7 0.085 12.7 0.5 2.1 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_25 PF13481.1 gi|21227416|ref|NP_633338.1| - 0.017 14.5 0.1 0.051 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|21227416|ref|NP_633338.1| - 0.024 13.5 0.0 0.046 12.6 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.17 gi|21227416|ref|NP_633338.1| - 0.053 13.7 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.1 gi|21227416|ref|NP_633338.1| - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_5 PF07728.9 gi|21227416|ref|NP_633338.1| - 0.13 11.9 0.5 0.68 9.6 0.3 2.3 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) SSF PF00474.12 gi|21227417|ref|NP_633339.1| - 5.8e-07 28.4 0.1 5.8e-07 28.4 0.0 1.5 2 0 0 2 2 2 1 Sodium:solute symporter family SSF PF00474.12 gi|21227418|ref|NP_633340.1| - 3.7e-87 292.6 23.8 4.7e-87 292.2 16.5 1.1 1 0 0 1 1 1 1 Sodium:solute symporter family DUF3753 PF12575.3 gi|21227418|ref|NP_633340.1| - 1 9.1 6.9 4.4 7.1 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3753) Pyridoxal_deC PF00282.14 gi|21227419|ref|NP_633341.1| - 3.5e-33 114.5 0.0 5.1e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|21227419|ref|NP_633341.1| - 9.8e-09 34.4 0.1 4.8e-08 32.1 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|21227419|ref|NP_633341.1| - 9.5e-08 31.3 0.0 1e-06 27.9 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|21227419|ref|NP_633341.1| - 0.099 11.7 0.0 0.15 11.1 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase CBS PF00571.23 gi|21227420|ref|NP_633342.1| - 1.8e-27 94.8 3.4 3.3e-13 49.1 0.0 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.17 gi|21227420|ref|NP_633342.1| - 1.3e-20 73.2 8.7 3.4e-15 55.5 2.4 2.3 1 1 1 2 2 2 2 Peptidase family M50 Peptidase_M50B PF13398.1 gi|21227420|ref|NP_633342.1| - 0.00039 19.8 0.3 0.00039 19.8 0.2 2.1 2 0 0 2 2 2 1 Peptidase M50B-like TraB PF01963.12 gi|21227421|ref|NP_633343.1| - 2e-52 178.2 0.0 2.5e-52 177.8 0.0 1.1 1 0 0 1 1 1 1 TraB family DUF1625 PF07787.7 gi|21227421|ref|NP_633343.1| - 1 8.5 4.5 21 4.2 2.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1625) DUF4405 PF14358.1 gi|21227422|ref|NP_633344.1| - 1.1e-08 35.1 5.9 1.5e-08 34.6 4.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4405) Ferric_reduct PF01794.14 gi|21227422|ref|NP_633344.1| - 9.3e-05 22.5 0.1 9.3e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component Cytochrom_B_N PF00033.14 gi|21227422|ref|NP_633344.1| - 0.0054 16.0 0.2 0.0054 16.0 0.1 1.2 1 0 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB PspB PF06667.7 gi|21227422|ref|NP_633344.1| - 0.095 12.6 5.9 1.5 8.7 0.5 2.2 1 1 1 2 2 2 0 Phage shock protein B FTR_C PF02741.10 gi|21227423|ref|NP_633345.1| - 5.3e-69 230.7 3.2 8.4e-69 230.1 2.2 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.13 gi|21227423|ref|NP_633345.1| - 2.2e-66 222.0 1.0 3.3e-66 221.4 0.1 1.7 2 1 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase PAS_4 PF08448.5 gi|21227423|ref|NP_633345.1| - 0.053 13.5 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 PAS fold CheD PF03975.8 gi|21227424|ref|NP_633346.1| - 4.4e-32 110.2 0.1 5.9e-32 109.8 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.7 gi|21227425|ref|NP_633347.1| - 2.1e-09 36.9 0.5 0.00057 19.5 0.1 2.5 2 0 0 2 2 2 2 CheC-like family CheX PF13690.1 gi|21227425|ref|NP_633347.1| - 0.00064 19.5 0.2 0.0035 17.1 0.0 2.0 2 0 0 2 2 2 1 Chemotaxis phosphatase CheX CheR PF01739.13 gi|21227426|ref|NP_633348.1| - 2.2e-58 196.7 0.2 3.4e-58 196.1 0.1 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.10 gi|21227426|ref|NP_633348.1| - 2.7e-15 55.4 0.4 5.9e-15 54.3 0.3 1.6 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_12 PF08242.7 gi|21227426|ref|NP_633348.1| - 1.1e-05 25.8 0.1 4.3e-05 23.8 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227426|ref|NP_633348.1| - 2.2e-05 24.1 0.2 0.16 11.5 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227426|ref|NP_633348.1| - 5.9e-05 23.6 0.0 0.00014 22.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227426|ref|NP_633348.1| - 0.018 14.7 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227426|ref|NP_633348.1| - 0.025 15.0 0.1 0.46 10.9 0.1 2.7 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|21227426|ref|NP_633348.1| - 0.051 12.9 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Nodulation protein S (NodS) CheW PF01584.14 gi|21227427|ref|NP_633349.1| - 1.2e-25 89.5 0.8 3.9e-25 87.9 0.4 1.9 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.21 gi|21227427|ref|NP_633349.1| - 6.9e-25 86.9 0.2 1.4e-24 85.9 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.18 gi|21227427|ref|NP_633349.1| - 1.6e-20 72.8 0.1 4.3e-20 71.5 0.1 1.8 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.9 gi|21227427|ref|NP_633349.1| - 1.8e-15 57.0 1.5 1.8e-15 57.0 1.0 2.8 3 1 0 3 3 3 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.1 gi|21227427|ref|NP_633349.1| - 0.00019 21.1 0.0 0.00019 21.1 0.0 2.5 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIP-T3 PF10243.4 gi|21227427|ref|NP_633349.1| - 0.014 13.8 53.3 0.022 13.2 36.9 1.3 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 CENP-T PF15511.1 gi|21227427|ref|NP_633349.1| - 0.36 10.0 22.5 0.53 9.4 15.6 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T Mitofilin PF09731.4 gi|21227427|ref|NP_633349.1| - 0.75 8.3 39.3 9.9 4.6 0.0 2.1 2 0 0 2 2 2 0 Mitochondrial inner membrane protein Borrelia_P83 PF05262.6 gi|21227427|ref|NP_633349.1| - 3.6 5.7 30.5 5 5.2 21.1 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein CheB_methylest PF01339.12 gi|21227428|ref|NP_633350.1| - 1.3e-66 223.5 0.1 1.1e-65 220.4 0.0 2.2 2 0 0 2 2 2 1 CheB methylesterase Response_reg PF00072.19 gi|21227428|ref|NP_633350.1| - 1.6e-21 76.4 0.4 3.8e-21 75.1 0.1 1.7 2 0 0 2 2 2 1 Response regulator receiver domain Eno-Rase_NADH_b PF12242.3 gi|21227428|ref|NP_633350.1| - 0.025 14.3 0.0 0.055 13.2 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Response_reg PF00072.19 gi|21227429|ref|NP_633351.1| - 4.4e-28 97.5 1.9 5.2e-28 97.2 1.3 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|21227430|ref|NP_633352.1| - 2.3e-22 79.1 0.0 2.5e-22 78.9 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MCPsignal PF00015.16 gi|21227431|ref|NP_633353.1| - 9.7e-57 191.9 65.3 3.8e-56 189.9 19.3 4.9 4 1 2 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.20 gi|21227431|ref|NP_633353.1| - 1.4e-11 44.4 0.0 1.4e-11 44.4 0.0 5.1 4 2 1 5 5 5 1 HAMP domain SNARE PF05739.14 gi|21227431|ref|NP_633353.1| - 0.029 14.0 18.2 0.059 13.0 2.2 5.5 3 1 1 4 4 4 0 SNARE domain DUF948 PF06103.6 gi|21227431|ref|NP_633353.1| - 0.059 13.2 27.2 0.37 10.6 2.0 5.9 3 2 2 6 6 6 0 Bacterial protein of unknown function (DUF948) cwf21 PF08312.7 gi|21227431|ref|NP_633353.1| - 0.11 12.4 4.1 1.2 9.0 0.0 3.7 3 0 0 3 3 3 0 cwf21 domain Alg14 PF08660.6 gi|21227431|ref|NP_633353.1| - 1 9.3 0.0 1 9.3 0.0 3.0 3 0 0 3 3 3 0 Oligosaccharide biosynthesis protein Alg14 like PhageMin_Tail PF10145.4 gi|21227431|ref|NP_633353.1| - 2.3 7.8 23.5 0.047 13.3 7.5 3.2 3 1 0 3 3 3 0 Phage-related minor tail protein CheW PF01584.14 gi|21227432|ref|NP_633354.1| - 2e-34 117.9 0.3 2.5e-34 117.7 0.2 1.1 1 0 0 1 1 1 1 CheW-like domain Pol_alpha_B_N PF08418.5 gi|21227432|ref|NP_633354.1| - 0.0073 15.8 3.8 0.0097 15.4 2.6 1.2 1 0 0 1 1 1 1 DNA polymerase alpha subunit B N-terminal Pex14_N PF04695.8 gi|21227432|ref|NP_633354.1| - 1.3 9.0 7.8 1.9 8.5 5.4 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Herpes_capsid PF06112.6 gi|21227432|ref|NP_633354.1| - 2.6 8.0 12.4 3.3 7.7 8.6 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein GntP_permease PF02447.11 gi|21227433|ref|NP_633355.1| - 3.3e-66 223.6 19.5 4.3e-66 223.2 13.5 1.1 1 0 0 1 1 1 1 GntP family permease DUF2583 PF10762.4 gi|21227433|ref|NP_633355.1| - 3.6 7.7 5.3 8.4 6.6 0.2 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2583) Fe_dep_repress PF01325.14 gi|21227434|ref|NP_633356.1| - 1.3e-13 50.6 0.0 2e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|21227434|ref|NP_633356.1| - 1.3e-11 43.9 0.0 2e-11 43.3 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.2 gi|21227434|ref|NP_633356.1| - 2.2e-05 24.0 0.0 6.1e-05 22.6 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.2 gi|21227434|ref|NP_633356.1| - 0.00011 21.9 0.0 0.0021 17.7 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.17 gi|21227434|ref|NP_633356.1| - 0.00016 21.3 0.0 0.00037 20.1 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|21227434|ref|NP_633356.1| - 0.00062 20.0 0.0 0.00087 19.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21227434|ref|NP_633356.1| - 0.0017 18.0 0.0 0.007 16.0 0.0 2.0 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_DeoR PF08220.7 gi|21227434|ref|NP_633356.1| - 0.0036 16.8 0.0 0.33 10.5 0.0 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain Rrf2 PF02082.15 gi|21227434|ref|NP_633356.1| - 0.0076 16.3 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.5 gi|21227434|ref|NP_633356.1| - 0.02 14.4 0.0 0.04 13.4 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|21227434|ref|NP_633356.1| - 0.023 14.4 0.0 0.092 12.5 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Topoisom_bac PF01131.15 gi|21227434|ref|NP_633356.1| - 0.034 12.9 0.0 0.041 12.6 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase HTH_23 PF13384.1 gi|21227434|ref|NP_633356.1| - 0.067 12.8 0.0 7.7 6.3 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain HTH_5 PF01022.15 gi|21227434|ref|NP_633356.1| - 0.11 12.2 0.0 0.4 10.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.1 gi|21227434|ref|NP_633356.1| - 0.11 12.6 0.1 0.72 10.0 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain TroA PF01297.12 gi|21227435|ref|NP_633357.1| - 1.6e-74 250.3 0.2 1.9e-74 250.1 0.2 1.0 1 0 0 1 1 1 1 Periplasmic solute binding protein family Aminotran_MocR PF12897.2 gi|21227435|ref|NP_633357.1| - 0.022 13.3 0.0 0.036 12.6 0.0 1.3 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glyco_tran_WecB PF03808.8 gi|21227435|ref|NP_633357.1| - 0.081 12.3 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family FtsH_ext PF06480.10 gi|21227435|ref|NP_633357.1| - 0.12 12.5 0.5 0.5 10.5 0.1 2.0 2 1 0 2 2 2 0 FtsH Extracellular ABC_tran PF00005.22 gi|21227436|ref|NP_633358.1| - 2.6e-29 102.2 0.0 3.7e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227436|ref|NP_633358.1| - 1.1e-19 71.4 0.3 3.1e-11 43.7 0.0 2.1 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21227436|ref|NP_633358.1| - 9.8e-08 31.4 0.0 2.5e-07 30.1 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21227436|ref|NP_633358.1| - 6.9e-06 25.3 0.4 0.0082 15.2 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21227436|ref|NP_633358.1| - 0.00035 20.7 0.1 0.0011 19.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|21227436|ref|NP_633358.1| - 0.00083 19.7 1.9 0.0014 19.0 1.3 1.6 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|21227436|ref|NP_633358.1| - 0.00089 19.1 0.0 0.024 14.5 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|21227436|ref|NP_633358.1| - 0.005 16.3 0.4 0.15 11.4 0.1 2.1 1 1 0 2 2 2 1 AAA-like domain AAA PF00004.24 gi|21227436|ref|NP_633358.1| - 0.0051 16.9 1.3 0.064 13.4 0.9 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.1 gi|21227436|ref|NP_633358.1| - 0.011 15.4 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain Arch_ATPase PF01637.13 gi|21227436|ref|NP_633358.1| - 0.012 15.3 0.4 0.023 14.3 0.3 1.8 1 1 0 1 1 1 0 Archaeal ATPase T2SE PF00437.15 gi|21227436|ref|NP_633358.1| - 0.023 13.5 0.0 0.042 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|21227436|ref|NP_633358.1| - 0.041 13.4 0.1 0.082 12.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.10 gi|21227436|ref|NP_633358.1| - 0.056 12.1 0.0 0.14 10.8 0.0 1.5 1 1 0 2 2 2 0 Rad17 cell cycle checkpoint protein ABC_ATPase PF09818.4 gi|21227436|ref|NP_633358.1| - 0.061 11.9 0.7 6.4 5.2 0.5 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.1 gi|21227436|ref|NP_633358.1| - 0.061 13.1 0.2 0.55 10.0 0.1 2.3 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|21227436|ref|NP_633358.1| - 0.065 12.8 0.9 0.36 10.4 0.4 2.0 2 0 0 2 2 2 0 NACHT domain AAA_14 PF13173.1 gi|21227436|ref|NP_633358.1| - 0.079 12.8 0.6 4.4 7.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|21227436|ref|NP_633358.1| - 0.16 11.7 0.5 3.5 7.3 0.1 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21227436|ref|NP_633358.1| - 0.17 12.7 1.9 0.73 10.6 1.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|21227436|ref|NP_633358.1| - 0.22 11.8 1.0 1.1 9.6 0.7 2.2 1 1 0 1 1 1 0 AAA domain ABC-3 PF00950.12 gi|21227437|ref|NP_633359.1| - 4.4e-82 275.2 28.6 5.3e-82 274.9 19.8 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.13 gi|21227437|ref|NP_633359.1| - 1.1e-09 37.6 18.3 1.1e-09 37.6 12.7 1.8 1 1 0 1 1 1 1 FecCD transport family Ninjurin PF04923.7 gi|21227437|ref|NP_633359.1| - 0.23 11.1 4.0 0.64 9.7 2.8 1.7 1 0 0 1 1 1 0 Ninjurin DUF11 PF01345.13 gi|21227440|ref|NP_633362.1| - 5.4e-45 151.3 72.9 1.1e-06 28.6 1.0 11.3 9 3 0 9 9 9 8 Domain of unknown function DUF11 MazG PF03819.12 gi|21227440|ref|NP_633362.1| - 0.0064 16.4 0.1 14 5.7 0.0 3.9 4 0 0 4 4 4 1 MazG nucleotide pyrophosphohydrolase domain AbrB-like PF14250.1 gi|21227440|ref|NP_633362.1| - 0.064 13.1 4.6 15 5.6 0.1 4.9 5 0 0 5 5 5 0 AbrB-like transcriptional regulator DUF2393 PF09624.5 gi|21227440|ref|NP_633362.1| - 0.37 10.2 30.9 0.66 9.4 0.1 6.8 7 0 0 7 7 7 0 Protein of unknown function (DUF2393) TPP_enzyme_C PF02775.16 gi|21227441|ref|NP_633363.1| - 8.7e-28 96.8 0.0 1.5e-27 96.0 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|21227442|ref|NP_633364.1| - 1.2e-66 224.5 0.1 1.6e-66 224.0 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|21227442|ref|NP_633364.1| - 8.1e-07 29.0 0.0 1.9e-06 27.8 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4 PF00037.22 gi|21227443|ref|NP_633365.1| - 4.6e-13 48.1 22.7 5.5e-08 32.0 3.2 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227443|ref|NP_633365.1| - 1.9e-11 43.5 22.3 1.3e-08 34.5 8.9 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227443|ref|NP_633365.1| - 1.1e-09 37.7 20.3 1.7e-05 24.4 2.5 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227443|ref|NP_633365.1| - 2.6e-09 36.4 17.0 6.1e-05 22.6 2.3 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227443|ref|NP_633365.1| - 1.7e-08 34.6 12.3 1.7e-08 34.6 8.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227443|ref|NP_633365.1| - 1e-07 31.6 10.4 1e-07 31.6 7.2 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227443|ref|NP_633365.1| - 1.9e-07 31.2 15.3 3.3e-07 30.4 9.0 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227443|ref|NP_633365.1| - 8.9e-06 26.3 17.4 0.0011 19.7 1.6 2.9 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21227443|ref|NP_633365.1| - 2.5e-05 24.2 18.5 0.0025 18.0 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21227443|ref|NP_633365.1| - 0.00018 21.4 19.0 0.00055 19.9 10.2 2.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227443|ref|NP_633365.1| - 0.0017 18.6 18.5 0.5 10.7 5.3 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227443|ref|NP_633365.1| - 0.013 15.3 5.2 0.013 15.3 3.6 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21227443|ref|NP_633365.1| - 0.027 14.8 15.1 0.11 12.8 2.4 2.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21227443|ref|NP_633365.1| - 0.15 12.4 18.0 1 9.8 2.8 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227443|ref|NP_633365.1| - 0.27 11.8 18.4 0.2 12.2 2.4 2.6 2 1 1 3 3 2 0 4Fe-4S single cluster domain TNFR_c6 PF00020.13 gi|21227443|ref|NP_633365.1| - 4.6 7.3 12.1 12 6.0 0.1 3.3 3 0 0 3 3 3 0 TNFR/NGFR cysteine-rich region POR PF01558.13 gi|21227444|ref|NP_633366.1| - 2.4e-40 138.2 1.1 2.8e-40 138.0 0.8 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Dus PF01207.12 gi|21227445|ref|NP_633367.1| - 4.4e-78 262.2 0.0 5.2e-78 262.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Oxidored_FMN PF00724.15 gi|21227445|ref|NP_633367.1| - 2.8e-05 23.3 0.0 4.7e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.16 gi|21227445|ref|NP_633367.1| - 6e-05 22.4 0.0 9.9e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|21227445|ref|NP_633367.1| - 0.0069 15.4 0.1 0.012 14.6 0.0 1.4 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG BtpA PF03437.10 gi|21227445|ref|NP_633367.1| - 0.081 12.1 0.1 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 BtpA family Peptidase_S24 PF00717.18 gi|21227446|ref|NP_633368.1| - 5.1e-05 22.8 0.2 9.1e-05 22.0 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.11 gi|21227447|ref|NP_633369.1| - 1.2e-16 60.6 0.0 1.9e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|21227447|ref|NP_633369.1| - 1.6e-11 44.2 0.0 3.6e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21227447|ref|NP_633369.1| - 7e-10 38.6 0.2 1.3e-09 37.7 0.1 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|21227447|ref|NP_633369.1| - 6.4e-05 22.7 0.0 0.00015 21.5 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Wyosine_form PF08608.7 gi|21227448|ref|NP_633370.1| - 7.3e-25 86.8 0.0 2.7e-24 85.0 0.0 2.0 2 0 0 2 2 2 1 Wyosine base formation Radical_SAM PF04055.16 gi|21227448|ref|NP_633370.1| - 3.3e-21 76.1 0.3 1.4e-19 70.8 0.1 2.7 3 1 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21227448|ref|NP_633370.1| - 0.0034 17.3 0.0 0.01 15.8 0.0 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain HAD_2 PF13419.1 gi|21227448|ref|NP_633370.1| - 0.015 15.5 0.0 0.12 12.6 0.0 2.3 2 1 1 3 3 3 0 Haloacid dehalogenase-like hydrolase Inhibitor_I29 PF08246.7 gi|21227448|ref|NP_633370.1| - 0.11 12.7 0.1 0.22 11.8 0.1 1.4 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) eRF1_2 PF03464.10 gi|21227449|ref|NP_633371.1| - 4.2e-35 120.9 0.0 7.3e-35 120.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.10 gi|21227449|ref|NP_633371.1| - 1.1e-30 106.1 0.0 4.8e-30 104.1 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.10 gi|21227449|ref|NP_633371.1| - 7.5e-24 83.7 0.0 1.4e-23 82.8 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 zinc_ribbon_2 PF13240.1 gi|21227449|ref|NP_633371.1| - 0.012 15.0 1.5 0.3 10.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|21227449|ref|NP_633371.1| - 0.031 13.9 0.3 7.7 6.2 0.0 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit AMP_N PF05195.11 gi|21227449|ref|NP_633371.1| - 0.041 13.2 0.1 0.41 10.0 0.0 2.5 3 0 0 3 3 3 0 Aminopeptidase P, N-terminal domain DUF1759 PF03564.10 gi|21227449|ref|NP_633371.1| - 0.085 12.6 0.0 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) HypA PF01155.14 gi|21227449|ref|NP_633371.1| - 0.099 12.3 0.1 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_4 PF13717.1 gi|21227449|ref|NP_633371.1| - 0.11 12.2 0.3 4.2 7.1 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|21227449|ref|NP_633371.1| - 0.12 11.9 0.3 5.7 6.6 0.0 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|21227449|ref|NP_633371.1| - 0.23 10.7 2.8 1.1 8.6 2.0 1.9 1 1 1 2 2 2 0 zinc-ribbon domain tRNA-synt_1d PF00750.14 gi|21227450|ref|NP_633372.1| - 2.1e-56 191.2 0.1 2.8e-56 190.8 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|21227450|ref|NP_633372.1| - 5.1e-33 113.5 0.1 1.1e-32 112.4 0.0 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|21227450|ref|NP_633372.1| - 1.7e-13 50.9 0.1 5.1e-13 49.3 0.0 1.9 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.13 gi|21227450|ref|NP_633372.1| - 1.3e-07 30.6 0.0 0.0082 14.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|21227450|ref|NP_633372.1| - 9.2e-07 27.8 0.0 0.0015 17.2 0.0 3.3 1 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|21227450|ref|NP_633372.1| - 8.8e-05 21.7 0.1 0.00014 21.0 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.17 gi|21227450|ref|NP_633372.1| - 0.0036 15.3 0.0 0.0054 14.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) TUG-UBL1 PF11470.3 gi|21227450|ref|NP_633372.1| - 0.0093 15.8 0.0 0.031 14.1 0.0 1.8 2 0 0 2 2 2 1 GLUT4 regulating protein TUG Phage_int_SAM_4 PF13495.1 gi|21227451|ref|NP_633373.1| - 0.0022 18.2 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Asn_synthase PF00733.16 gi|21227453|ref|NP_633375.1| - 6e-18 65.2 0.0 3.8e-08 33.1 0.0 2.2 2 0 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.1 gi|21227453|ref|NP_633375.1| - 3.7e-05 23.4 0.0 8.5e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain QueC PF06508.8 gi|21227453|ref|NP_633375.1| - 0.0002 20.7 0.0 0.0011 18.3 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.12 gi|21227453|ref|NP_633375.1| - 0.011 14.6 0.0 0.022 13.6 0.0 1.6 1 0 0 1 1 1 0 NAD synthase GATase_6 PF13522.1 gi|21227453|ref|NP_633375.1| - 0.013 15.4 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|21227453|ref|NP_633375.1| - 0.046 12.4 0.0 0.14 10.8 0.0 1.7 2 0 0 2 2 2 0 Glutamine amidotransferases class-II Meth_synt_2 PF01717.13 gi|21227454|ref|NP_633376.1| - 0.00018 20.5 0.1 0.076 11.9 0.0 2.3 2 1 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|21227454|ref|NP_633376.1| - 0.018 14.3 0.1 0.03 13.5 0.1 1.3 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain HMGL-like PF00682.14 gi|21227454|ref|NP_633376.1| - 0.045 13.3 0.0 0.087 12.4 0.0 1.5 1 1 0 1 1 1 0 HMGL-like Meth_synt_2 PF01717.13 gi|21227455|ref|NP_633377.1| - 9.5e-06 24.8 0.0 0.00083 18.4 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain RHH_1 PF01402.16 gi|21227456|ref|NP_633378.1| - 0.007 16.2 0.1 0.018 14.8 0.0 1.7 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Latarcin PF10279.4 gi|21227456|ref|NP_633378.1| - 0.0073 16.4 0.2 0.0084 16.2 0.1 1.1 1 0 0 1 1 1 1 Latarcin precursor BLOC1_2 PF10046.4 gi|21227456|ref|NP_633378.1| - 0.0096 16.0 0.1 0.0096 16.0 0.1 1.1 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4113 PF13438.1 gi|21227456|ref|NP_633378.1| - 0.16 11.6 1.1 3.2 7.4 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) TRAM PF01938.15 gi|21227457|ref|NP_633379.1| - 4.5e-17 61.5 0.8 5e-17 61.4 0.6 1.0 1 0 0 1 1 1 1 TRAM domain S1 PF00575.18 gi|21227457|ref|NP_633379.1| - 0.091 12.8 1.4 0.26 11.4 1.0 1.7 1 1 0 1 1 1 0 S1 RNA binding domain DUF4265 PF14085.1 gi|21227457|ref|NP_633379.1| - 0.12 12.1 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) TRAM PF01938.15 gi|21227458|ref|NP_633380.1| - 1.1e-16 60.2 1.1 1.3e-16 60.1 0.8 1.0 1 0 0 1 1 1 1 TRAM domain S1 PF00575.18 gi|21227458|ref|NP_633380.1| - 0.065 13.3 2.2 0.18 11.9 1.5 1.7 1 1 0 1 1 1 0 S1 RNA binding domain DUF4265 PF14085.1 gi|21227458|ref|NP_633380.1| - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) TRAM PF01938.15 gi|21227459|ref|NP_633381.1| - 2.5e-16 59.2 1.3 2.8e-16 59.0 0.9 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.19 gi|21227459|ref|NP_633381.1| - 0.09 12.3 0.1 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) S1 PF00575.18 gi|21227459|ref|NP_633381.1| - 0.15 12.1 3.9 3.8 7.6 2.3 2.1 1 1 1 2 2 2 0 S1 RNA binding domain TRAM PF01938.15 gi|21227460|ref|NP_633382.1| - 3.8e-17 61.8 0.6 4.3e-17 61.6 0.4 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.19 gi|21227460|ref|NP_633382.1| - 0.091 12.3 0.1 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) S1 PF00575.18 gi|21227460|ref|NP_633382.1| - 0.16 12.1 2.2 2 8.5 1.7 2.1 1 1 1 2 2 2 0 S1 RNA binding domain Bactofilin PF04519.8 gi|21227461|ref|NP_633383.1| - 1.5e-05 24.9 0.8 2.8e-05 24.0 0.3 1.6 1 1 0 1 1 1 1 Polymer-forming cytoskeletal Hexapep PF00132.19 gi|21227461|ref|NP_633383.1| - 0.0049 16.3 0.4 0.13 11.8 0.1 3.0 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) DUF3494 PF11999.3 gi|21227461|ref|NP_633383.1| - 0.1 12.2 0.1 0.32 10.6 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3494) Borrelia_P13 PF05628.7 gi|21227461|ref|NP_633383.1| - 0.13 12.0 0.9 0.44 10.3 0.1 1.9 1 1 1 2 2 2 0 Borrelia membrane protein P13 ABC_tran PF00005.22 gi|21227462|ref|NP_633384.1| - 1e-32 113.3 0.0 1.5e-32 112.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227462|ref|NP_633384.1| - 1.2e-08 35.3 0.0 0.00021 21.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA PF00004.24 gi|21227462|ref|NP_633384.1| - 2.9e-06 27.5 0.9 3e-05 24.2 0.6 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|21227462|ref|NP_633384.1| - 3.5e-06 27.1 0.0 6.5e-06 26.2 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|21227462|ref|NP_633384.1| - 7.9e-05 21.8 0.0 0.007 15.4 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|21227462|ref|NP_633384.1| - 0.00032 20.8 0.6 0.005 16.9 0.4 2.3 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21227462|ref|NP_633384.1| - 0.00093 18.4 0.1 0.0016 17.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_33 PF13671.1 gi|21227462|ref|NP_633384.1| - 0.0015 18.4 0.0 0.0044 16.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21227462|ref|NP_633384.1| - 0.0017 18.0 0.0 0.052 13.2 0.0 2.2 2 0 0 2 2 2 1 Archaeal ATPase AAA_28 PF13521.1 gi|21227462|ref|NP_633384.1| - 0.0058 16.6 0.4 0.023 14.6 0.0 2.1 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|21227462|ref|NP_633384.1| - 0.0085 15.5 0.0 0.015 14.7 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_10 PF12846.2 gi|21227462|ref|NP_633384.1| - 0.012 15.0 0.2 0.13 11.7 0.0 2.0 1 1 0 2 2 2 0 AAA-like domain SMC_N PF02463.14 gi|21227462|ref|NP_633384.1| - 0.015 14.5 0.0 1.2 8.3 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|21227462|ref|NP_633384.1| - 0.015 14.6 0.1 0.038 13.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|21227462|ref|NP_633384.1| - 0.017 14.6 0.0 0.036 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.10 gi|21227462|ref|NP_633384.1| - 0.021 13.5 0.0 0.029 13.0 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_17 PF13207.1 gi|21227462|ref|NP_633384.1| - 0.026 15.3 0.4 0.13 13.0 0.1 2.1 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|21227462|ref|NP_633384.1| - 0.028 14.1 0.4 0.096 12.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NACHT PF05729.7 gi|21227462|ref|NP_633384.1| - 0.028 14.0 0.5 0.068 12.8 0.1 1.8 2 1 0 2 2 2 0 NACHT domain ABC_ATPase PF09818.4 gi|21227462|ref|NP_633384.1| - 0.034 12.7 0.6 0.21 10.1 0.1 2.2 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_18 PF13238.1 gi|21227462|ref|NP_633384.1| - 0.035 14.4 0.3 0.092 13.0 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|21227462|ref|NP_633384.1| - 0.044 14.0 0.2 0.092 13.0 0.0 1.6 2 0 0 2 2 1 0 AAA domain SbcCD_C PF13558.1 gi|21227462|ref|NP_633384.1| - 0.07 13.0 0.1 0.18 11.7 0.1 1.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PduV-EutP PF10662.4 gi|21227462|ref|NP_633384.1| - 0.1 12.1 0.2 0.25 10.8 0.1 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.1 gi|21227462|ref|NP_633384.1| - 0.12 12.2 0.1 0.32 10.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain UPF0079 PF02367.12 gi|21227462|ref|NP_633384.1| - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 NTPase_1 PF03266.10 gi|21227462|ref|NP_633384.1| - 0.17 11.6 1.5 3.9 7.1 0.2 2.4 2 0 0 2 2 2 0 NTPase BPD_transp_1 PF00528.17 gi|21227463|ref|NP_633385.1| - 6.2e-23 81.2 11.5 6.2e-23 81.2 8.0 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.1 gi|21227464|ref|NP_633386.1| - 9.6e-46 156.2 0.1 1.2e-45 155.8 0.1 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|21227464|ref|NP_633386.1| - 5.1e-18 65.4 0.0 7e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|21227464|ref|NP_633386.1| - 6.6e-09 35.5 0.0 8.4e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.15 gi|21227464|ref|NP_633386.1| - 0.00059 19.1 0.0 0.011 15.0 0.0 2.1 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 SBP_bac_7 PF03480.8 gi|21227464|ref|NP_633386.1| - 0.0027 16.8 0.0 0.0054 15.8 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 LysR_substrate PF03466.15 gi|21227464|ref|NP_633386.1| - 0.0044 16.1 0.0 0.0073 15.4 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain CBF PF03914.12 gi|21227464|ref|NP_633386.1| - 0.18 11.2 0.3 0.49 9.8 0.0 1.7 2 0 0 2 2 2 0 CBF/Mak21 family HTH_3 PF01381.17 gi|21227465|ref|NP_633387.1| - 1.4e-08 34.4 0.1 4.6e-08 32.7 0.0 1.9 2 1 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.2 gi|21227465|ref|NP_633387.1| - 2.1e-06 27.6 0.0 5e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21227465|ref|NP_633387.1| - 0.004 17.3 0.0 0.0096 16.1 0.0 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain CENP-B_N PF04218.8 gi|21227465|ref|NP_633387.1| - 0.0074 15.6 1.6 0.26 10.7 0.0 3.4 4 0 0 4 4 4 1 CENP-B N-terminal DNA-binding domain HTH_31 PF13560.1 gi|21227465|ref|NP_633387.1| - 0.03 14.5 0.0 0.058 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain PrpR_N PF06506.6 gi|21227465|ref|NP_633387.1| - 0.056 12.8 0.6 0.2 11.0 0.1 1.8 1 1 0 1 1 1 0 Propionate catabolism activator HTH_psq PF05225.11 gi|21227465|ref|NP_633387.1| - 0.063 12.8 0.6 0.95 9.0 0.0 2.6 2 0 0 2 2 2 0 helix-turn-helix, Psq domain S-layer PF07752.6 gi|21227466|ref|NP_633388.1| - 1.7e-186 617.3 33.6 7.9e-96 320.2 6.5 2.5 2 0 0 2 2 2 2 S-layer protein CarboxypepD_reg PF13620.1 gi|21227466|ref|NP_633388.1| - 3.4e-09 36.6 24.6 6.9e-05 22.8 0.3 6.3 5 1 1 6 6 6 2 Carboxypeptidase regulatory-like domain I-set PF07679.11 gi|21227466|ref|NP_633388.1| - 6.7e-05 22.6 12.3 0.0077 16.0 0.7 5.7 6 1 0 6 6 6 2 Immunoglobulin I-set domain Y_Y_Y PF07495.8 gi|21227466|ref|NP_633388.1| - 0.00017 21.2 10.1 0.021 14.5 0.8 4.3 4 1 1 5 5 5 2 Y_Y_Y domain PKD PF00801.15 gi|21227466|ref|NP_633388.1| - 0.0019 17.8 5.0 0.0019 17.8 3.4 6.5 4 1 1 5 5 5 1 PKD domain Big_3_4 PF13754.1 gi|21227466|ref|NP_633388.1| - 0.0048 17.1 2.4 0.0048 17.1 1.6 8.8 8 2 1 9 9 8 1 Bacterial Ig-like domain (group 3) Big_1 PF02369.11 gi|21227466|ref|NP_633388.1| - 0.007 16.2 0.9 0.007 16.2 0.6 6.7 7 0 0 7 7 6 2 Bacterial Ig-like domain (group 1) PEGA PF08308.6 gi|21227466|ref|NP_633388.1| - 0.039 13.7 5.9 0.23 11.2 0.2 4.2 4 0 0 4 4 4 0 PEGA domain PapC_N PF13954.1 gi|21227466|ref|NP_633388.1| - 0.04 13.4 0.8 0.78 9.3 0.0 2.8 2 1 1 3 3 3 0 PapC N-terminal domain Fn3-like PF14310.1 gi|21227466|ref|NP_633388.1| - 0.057 13.3 1.1 13 5.8 0.0 4.1 3 0 0 3 3 3 0 Fibronectin type III-like domain Cupredoxin_1 PF13473.1 gi|21227466|ref|NP_633388.1| - 0.11 12.3 5.4 0.3 11.0 0.1 4.0 3 1 1 4 4 4 0 Cupredoxin-like domain tRNA-synt_1c_C PF03950.13 gi|21227466|ref|NP_633388.1| - 1 8.9 7.8 3.7 7.1 0.1 4.2 4 1 1 5 5 5 0 tRNA synthetases class I (E and Q), anti-codon binding domain DUF4198 PF10670.4 gi|21227466|ref|NP_633388.1| - 2.4 8.0 12.0 0.69 9.8 0.2 3.9 3 1 1 4 4 4 0 Domain of unknown function (DUF4198) Pollen_Ole_e_I PF01190.12 gi|21227466|ref|NP_633388.1| - 7.8 6.4 7.8 1.3 8.8 0.1 3.5 5 0 0 5 5 5 0 Pollen proteins Ole e I like AIRS PF00586.19 gi|21227467|ref|NP_633389.1| - 1.8e-21 76.2 0.5 3.1e-21 75.4 0.4 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|21227467|ref|NP_633389.1| - 5.1e-08 33.0 0.0 9.4e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Radical_SAM PF04055.16 gi|21227468|ref|NP_633390.1| - 7.8e-19 68.4 0.0 1.3e-18 67.6 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21227468|ref|NP_633390.1| - 4.6e-10 39.5 0.0 1.2e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21227468|ref|NP_633390.1| - 6.3e-10 39.3 0.0 1.2e-09 38.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3381 PF11861.3 gi|21227468|ref|NP_633390.1| - 0.04 13.4 0.1 0.068 12.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) NRDD PF13597.1 gi|21227469|ref|NP_633391.1| - 1.5e-170 567.8 0.0 1.8e-170 567.6 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Glutaredoxin PF00462.19 gi|21227470|ref|NP_633392.1| - 5.1e-10 39.1 0.1 6.7e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|21227470|ref|NP_633392.1| - 0.00015 21.9 0.0 0.00018 21.6 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) ArsC PF03960.10 gi|21227470|ref|NP_633392.1| - 0.013 15.5 0.0 0.018 15.0 0.0 1.2 1 1 0 1 1 1 0 ArsC family Thioredoxin_2 PF13098.1 gi|21227470|ref|NP_633392.1| - 0.033 14.3 0.2 0.05 13.8 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain GST_N_3 PF13417.1 gi|21227470|ref|NP_633392.1| - 0.094 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Rad51 PF08423.6 gi|21227471|ref|NP_633393.1| - 5.7e-31 107.3 0.2 6.7e-31 107.1 0.1 1.0 1 0 0 1 1 1 1 Rad51 KaiC PF06745.8 gi|21227471|ref|NP_633393.1| - 5.2e-15 55.1 0.4 2.5e-14 52.9 0.3 1.9 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|21227471|ref|NP_633393.1| - 6.3e-13 48.5 0.0 9.8e-13 47.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|21227471|ref|NP_633393.1| - 8.1e-10 38.2 0.1 9.5e-10 38.0 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|21227471|ref|NP_633393.1| - 8e-07 28.7 0.0 9.8e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) IstB_IS21 PF01695.12 gi|21227471|ref|NP_633393.1| - 8.8e-05 21.9 0.0 0.00015 21.2 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein TrwB_AAD_bind PF10412.4 gi|21227471|ref|NP_633393.1| - 9.6e-05 21.1 0.2 0.00021 20.0 0.1 1.5 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain PhoH PF02562.11 gi|21227471|ref|NP_633393.1| - 0.00068 18.9 0.1 0.0013 18.0 0.1 1.3 1 0 0 1 1 1 1 PhoH-like protein SRP54 PF00448.17 gi|21227471|ref|NP_633393.1| - 0.001 18.5 0.0 0.0013 18.1 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DUF815 PF05673.8 gi|21227471|ref|NP_633393.1| - 0.001 18.0 0.0 0.0015 17.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF2075 PF09848.4 gi|21227471|ref|NP_633393.1| - 0.0025 16.8 0.0 0.0031 16.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CbiA PF01656.18 gi|21227471|ref|NP_633393.1| - 0.0055 16.1 0.0 0.0077 15.6 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain UvrD-helicase PF00580.16 gi|21227471|ref|NP_633393.1| - 0.016 14.5 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain MobB PF03205.9 gi|21227471|ref|NP_633393.1| - 0.018 14.7 0.1 0.035 13.7 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.1 gi|21227471|ref|NP_633393.1| - 0.021 14.4 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|21227471|ref|NP_633393.1| - 0.024 14.2 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|21227471|ref|NP_633393.1| - 0.034 13.8 0.0 0.071 12.8 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA_10 PF12846.2 gi|21227471|ref|NP_633393.1| - 0.039 13.4 0.1 2.2 7.6 0.0 2.2 2 0 0 2 2 2 0 AAA-like domain AAA PF00004.24 gi|21227471|ref|NP_633393.1| - 0.061 13.5 0.0 0.085 13.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_31 PF13614.1 gi|21227471|ref|NP_633393.1| - 0.066 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|21227471|ref|NP_633393.1| - 0.069 13.9 0.0 0.2 12.5 0.0 1.9 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|21227471|ref|NP_633393.1| - 0.075 12.8 0.0 0.25 11.1 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function DUF87 MipZ PF09140.6 gi|21227471|ref|NP_633393.1| - 0.077 12.0 0.0 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ IPT PF01745.11 gi|21227471|ref|NP_633393.1| - 0.14 11.3 0.1 0.36 9.9 0.1 1.7 2 0 0 2 2 2 0 Isopentenyl transferase NAD_binding_5 PF07994.7 gi|21227472|ref|NP_633394.1| - 5.7e-63 213.1 0.0 1.6e-62 211.6 0.0 1.6 1 1 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.12 gi|21227472|ref|NP_633394.1| - 5.3e-34 116.4 0.0 9.9e-34 115.5 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase IF-2B PF01008.12 gi|21227473|ref|NP_633395.1| - 2.1e-79 266.4 0.0 2.6e-79 266.1 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Sec61_beta PF03911.11 gi|21227474|ref|NP_633396.1| - 9.3e-09 34.9 0.1 1.3e-08 34.5 0.1 1.2 1 0 0 1 1 1 1 Sec61beta family DUF4341 PF14241.1 gi|21227474|ref|NP_633396.1| - 0.038 13.6 0.3 0.058 13.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4341) Abhydrolase_5 PF12695.2 gi|21227475|ref|NP_633397.1| - 6.6e-17 61.6 0.0 9.5e-17 61.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family AXE1 PF05448.7 gi|21227475|ref|NP_633397.1| - 2.5e-10 39.3 0.0 1.8e-09 36.5 0.0 1.9 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Abhydrolase_6 PF12697.2 gi|21227475|ref|NP_633397.1| - 6.3e-08 32.7 0.0 8.7e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|21227475|ref|NP_633397.1| - 1e-06 28.1 0.0 3.7e-05 23.0 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.13 gi|21227475|ref|NP_633397.1| - 0.0014 17.9 0.0 0.002 17.4 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.8 gi|21227475|ref|NP_633397.1| - 0.0039 16.8 0.0 0.0049 16.4 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.6 gi|21227475|ref|NP_633397.1| - 0.055 13.1 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF981 PF06168.6 gi|21227475|ref|NP_633397.1| - 0.15 11.8 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF981) MutS_V PF00488.16 gi|21227476|ref|NP_633398.1| - 3.2e-09 36.5 0.0 5.1e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.1 gi|21227476|ref|NP_633398.1| - 0.0091 16.1 0.5 2.6 8.2 0.0 3.1 2 0 0 2 2 2 2 Helix-hairpin-helix domain AAA_23 PF13476.1 gi|21227476|ref|NP_633398.1| - 0.031 14.5 4.1 1.2 9.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain HHH_2 PF12826.2 gi|21227476|ref|NP_633398.1| - 0.071 13.0 3.1 0.077 12.8 0.1 2.6 3 0 0 3 3 3 0 Helix-hairpin-helix motif PP_kinase_C PF13090.1 gi|21227477|ref|NP_633399.1| - 1.5e-151 503.9 0.0 2e-151 503.6 0.0 1.1 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain PP_kinase PF02503.12 gi|21227477|ref|NP_633399.1| - 1.1e-62 211.2 0.1 4.3e-62 209.2 0.0 1.9 2 0 0 2 2 2 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.1 gi|21227477|ref|NP_633399.1| - 5.6e-35 119.7 0.2 1.6e-34 118.2 0.1 1.8 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.1 gi|21227477|ref|NP_633399.1| - 6.6e-09 35.5 0.0 9.9e-05 22.0 0.0 2.9 1 1 1 2 2 2 2 PLD-like domain Succ_CoA_lig PF13607.1 gi|21227477|ref|NP_633399.1| - 0.093 12.3 0.3 0.18 11.4 0.2 1.4 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain Ppx-GppA PF02541.11 gi|21227478|ref|NP_633400.1| - 4.7e-64 216.3 0.9 9.3e-64 215.3 0.6 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.17 gi|21227478|ref|NP_633400.1| - 2.2e-10 40.5 2.1 3.5e-10 39.9 0.7 1.9 2 0 0 2 2 2 1 HD domain FtsA PF14450.1 gi|21227478|ref|NP_633400.1| - 0.00014 21.6 0.0 0.038 13.8 0.0 2.8 2 1 0 2 2 2 2 Cell division protein FtsA Hydantoinase_A PF01968.13 gi|21227478|ref|NP_633400.1| - 0.017 14.1 0.3 0.06 12.4 0.0 2.0 1 1 1 2 2 2 0 Hydantoinase/oxoprolinase CAF1 PF04857.15 gi|21227478|ref|NP_633400.1| - 0.055 12.7 0.0 0.1 11.8 0.0 1.4 1 0 0 1 1 1 0 CAF1 family ribonuclease CHAD PF05235.9 gi|21227479|ref|NP_633401.1| - 2.1e-54 184.5 0.2 2.1e-54 184.5 0.2 1.9 2 0 0 2 2 2 1 CHAD domain CYTH PF01928.16 gi|21227479|ref|NP_633401.1| - 1.6e-24 86.6 2.6 1.6e-24 86.5 0.4 2.1 2 0 0 2 2 2 1 CYTH domain AAA_16 PF13191.1 gi|21227480|ref|NP_633402.1| - 1.9e-12 47.5 0.0 5.2e-12 46.1 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain Cdc6_C PF09079.6 gi|21227480|ref|NP_633402.1| - 2.3e-08 33.6 0.1 6.5e-08 32.1 0.1 1.8 1 0 0 1 1 1 1 CDC6, C terminal AAA_22 PF13401.1 gi|21227480|ref|NP_633402.1| - 2.7e-06 27.5 0.0 5.2e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21227480|ref|NP_633402.1| - 8.5e-06 26.0 0.0 1.8e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.1 gi|21227480|ref|NP_633402.1| - 0.0001 22.0 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21227480|ref|NP_633402.1| - 0.0019 17.9 0.1 0.0045 16.7 0.1 1.6 1 0 0 1 1 1 1 Part of AAA domain Arch_ATPase PF01637.13 gi|21227480|ref|NP_633402.1| - 0.0019 17.9 0.0 0.0066 16.1 0.0 1.8 2 0 0 2 2 2 1 Archaeal ATPase IstB_IS21 PF01695.12 gi|21227480|ref|NP_633402.1| - 0.0045 16.4 0.1 0.58 9.5 0.0 2.4 2 0 0 2 2 2 1 IstB-like ATP binding protein DUF815 PF05673.8 gi|21227480|ref|NP_633402.1| - 0.011 14.6 0.0 0.05 12.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Zeta_toxin PF06414.7 gi|21227480|ref|NP_633402.1| - 0.012 14.7 0.0 0.022 13.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_32 PF13654.1 gi|21227480|ref|NP_633402.1| - 0.028 13.0 0.0 0.63 8.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|21227480|ref|NP_633402.1| - 0.033 13.5 0.0 0.11 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|21227480|ref|NP_633402.1| - 0.047 13.4 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RuvB_N PF05496.7 gi|21227480|ref|NP_633402.1| - 0.064 12.2 0.0 0.1 11.6 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus DUF835 PF05763.7 gi|21227480|ref|NP_633402.1| - 0.067 12.7 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF835) Phage-MuB_C PF09077.6 gi|21227480|ref|NP_633402.1| - 0.091 12.4 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Mu B transposition protein, C terminal AAA_24 PF13479.1 gi|21227480|ref|NP_633402.1| - 0.15 11.6 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Penicillinase_R PF03965.11 gi|21227480|ref|NP_633402.1| - 0.16 12.0 0.0 0.38 10.8 0.0 1.7 1 0 0 1 1 1 0 Penicillinase repressor Cpn60_TCP1 PF00118.19 gi|21227481|ref|NP_633403.1| - 2.6e-169 563.9 14.7 2.9e-169 563.7 10.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HSP70 PF00012.15 gi|21227482|ref|NP_633404.1| - 4.4e-177 589.6 3.8 1.8e-174 581.0 2.6 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.8 gi|21227482|ref|NP_633404.1| - 6e-14 51.3 0.6 1.1e-13 50.5 0.4 1.4 1 0 0 1 1 1 1 MreB/Mbl protein Hydantoinase_A PF01968.13 gi|21227482|ref|NP_633404.1| - 0.084 11.9 0.5 3.1 6.8 0.1 2.4 1 1 0 2 2 2 0 Hydantoinase/oxoprolinase FtsA PF14450.1 gi|21227482|ref|NP_633404.1| - 0.11 12.3 4.5 0.83 9.5 1.3 2.9 2 1 0 2 2 2 0 Cell division protein FtsA DnaJ PF00226.26 gi|21227483|ref|NP_633405.1| - 6.8e-20 70.5 6.3 1.1e-19 69.8 4.4 1.4 1 0 0 1 1 1 1 DnaJ domain DUF169 PF02596.10 gi|21227484|ref|NP_633406.1| - 3.6e-61 206.3 0.0 4.6e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF3721 PF12518.3 gi|21227484|ref|NP_633406.1| - 0.15 11.6 1.6 2.7 7.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function tRNA-synt_2d PF01409.15 gi|21227485|ref|NP_633407.1| - 1e-54 185.3 0.0 2.1e-49 167.9 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|21227485|ref|NP_633407.1| - 0.00059 19.4 0.1 0.0032 17.0 0.1 2.1 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Translin PF01997.11 gi|21227486|ref|NP_633408.1| - 9.5e-39 133.0 0.0 1.2e-38 132.7 0.0 1.1 1 0 0 1 1 1 1 Translin family UPF0147 PF03685.8 gi|21227487|ref|NP_633409.1| - 5.5e-37 125.5 1.6 6.3e-37 125.3 1.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.7 gi|21227487|ref|NP_633409.1| - 0.0069 16.4 0.0 1.9 8.6 0.0 2.2 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0253) Mating_N PF12731.2 gi|21227487|ref|NP_633409.1| - 0.093 12.6 0.0 0.14 12.0 0.0 1.3 1 1 0 1 1 1 0 Mating-type protein beta 1 RasGEF_N_2 PF14663.1 gi|21227487|ref|NP_633409.1| - 0.14 12.1 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Auto_anti-p27 PF06677.7 gi|21227488|ref|NP_633410.1| - 1.9e-17 62.7 1.0 3e-17 62.1 0.7 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DMP1 PF07263.6 gi|21227488|ref|NP_633410.1| - 0.12 11.0 8.3 0.16 10.7 5.7 1.0 1 0 0 1 1 1 0 Dentin matrix protein 1 (DMP1) BHD_2 PF10404.4 gi|21227488|ref|NP_633410.1| - 0.24 11.7 1.9 0.48 10.7 1.3 1.5 1 0 0 1 1 1 0 Rad4 beta-hairpin domain 2 eIF3g PF12353.3 gi|21227488|ref|NP_633410.1| - 1.9 8.4 4.8 0.6 10.0 0.7 2.0 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G ERCC4 PF02732.10 gi|21227489|ref|NP_633411.1| - 1.6e-25 89.5 0.0 5e-25 87.9 0.0 1.9 1 0 0 1 1 1 1 ERCC4 domain DEAD PF00270.24 gi|21227489|ref|NP_633411.1| - 1.6e-19 70.0 0.0 7.5e-19 67.8 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21227489|ref|NP_633411.1| - 2.5e-19 68.9 0.1 1.4e-18 66.5 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|21227489|ref|NP_633411.1| - 4.4e-15 55.9 0.8 5e-14 52.5 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_5 PF14520.1 gi|21227489|ref|NP_633411.1| - 8.8e-14 51.4 0.1 1.4e-12 47.5 0.1 2.8 3 0 0 3 3 2 1 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|21227489|ref|NP_633411.1| - 4.8e-12 45.5 0.0 1.6e-11 43.8 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.18 gi|21227489|ref|NP_633411.1| - 1.2e-06 27.9 0.1 1.9e-05 24.0 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.15 gi|21227489|ref|NP_633411.1| - 0.00017 21.7 0.8 0.0022 18.2 0.0 3.1 2 1 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_8 PF14716.1 gi|21227489|ref|NP_633411.1| - 0.00096 19.2 0.2 0.0045 17.1 0.1 2.3 1 1 1 2 2 2 1 Helix-hairpin-helix domain HHH_3 PF12836.2 gi|21227489|ref|NP_633411.1| - 0.0017 18.2 0.1 0.021 14.7 0.1 3.0 3 1 0 3 3 3 1 Helix-hairpin-helix motif DUF1870 PF08965.5 gi|21227489|ref|NP_633411.1| - 0.0054 16.3 0.0 0.016 14.8 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1870) tRNA-synt_2b PF00587.20 gi|21227490|ref|NP_633412.1| - 6.5e-58 195.1 0.2 1e-57 194.5 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|21227490|ref|NP_633412.1| - 3.9e-22 78.0 0.5 7.1e-21 73.9 0.0 2.8 2 0 0 2 2 2 1 Anticodon binding domain Zn-ribbon_8 PF09723.5 gi|21227490|ref|NP_633412.1| - 0.061 13.2 2.7 4.6 7.2 0.1 2.7 2 0 0 2 2 2 0 Zinc ribbon domain Abi PF02517.11 gi|21227491|ref|NP_633413.1| - 2.6e-10 40.2 10.1 2.6e-10 40.2 7.0 3.2 2 1 1 3 3 3 1 CAAX protease self-immunity Sex_peptide PF08138.6 gi|21227491|ref|NP_633413.1| - 0.47 10.3 0.1 0.47 10.3 0.0 2.7 4 0 0 4 4 4 0 Sex peptide (SP) family Choline_transpo PF04515.7 gi|21227491|ref|NP_633413.1| - 3.3 6.3 10.8 0.79 8.4 2.3 2.1 2 0 0 2 2 2 0 Plasma-membrane choline transporter CAAD PF14159.1 gi|21227491|ref|NP_633413.1| - 7 6.3 7.7 0.89 9.2 0.8 2.8 2 1 1 3 3 3 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Grp1_Fun34_YaaH PF01184.14 gi|21227492|ref|NP_633414.1| - 1e-41 142.6 21.7 1.2e-41 142.3 15.0 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family FixP_N PF14715.1 gi|21227492|ref|NP_633414.1| - 2.9 7.3 0.0 2.9 7.3 0.0 3.6 4 0 0 4 4 4 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SurE PF01975.12 gi|21227493|ref|NP_633415.1| - 1.8e-55 187.3 0.0 2.1e-55 187.0 0.0 1.0 1 0 0 1 1 1 1 Survival protein SurE Radical_SAM PF04055.16 gi|21227495|ref|NP_633417.1| - 5.9e-33 114.3 0.8 7.2e-32 110.8 0.1 2.2 2 1 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.8 gi|21227495|ref|NP_633417.1| - 1.8e-25 89.0 0.0 2.8e-25 88.4 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.1 gi|21227495|ref|NP_633417.1| - 1e-07 32.1 0.2 2.2e-07 31.1 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227495|ref|NP_633417.1| - 5.5e-07 29.6 0.6 1.1e-06 28.6 0.4 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain CdhD PF03599.11 gi|21227495|ref|NP_633417.1| - 0.028 12.9 0.0 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit GATase_3 PF07685.9 gi|21227496|ref|NP_633418.1| - 1.1e-29 103.0 0.0 1.7e-29 102.4 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|21227496|ref|NP_633418.1| - 8.4e-25 87.3 0.0 1.4e-24 86.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|21227496|ref|NP_633418.1| - 3.1e-20 72.6 2.6 1.7e-17 63.7 1.8 2.2 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|21227496|ref|NP_633418.1| - 0.03 14.0 0.1 0.88 9.2 0.1 2.3 2 0 0 2 2 2 0 NTPase DUF1611 PF07755.6 gi|21227496|ref|NP_633418.1| - 0.064 11.8 0.1 0.21 10.2 0.0 1.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1611) CTP_synth_N PF06418.9 gi|21227496|ref|NP_633418.1| - 0.064 12.3 0.2 0.19 10.7 0.0 1.8 2 0 0 2 2 2 0 CTP synthase N-terminus MobB PF03205.9 gi|21227496|ref|NP_633418.1| - 0.13 12.0 0.2 0.44 10.2 0.2 1.9 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.13 gi|21227496|ref|NP_633418.1| - 0.15 11.6 0.2 17 4.9 0.0 2.4 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family TIP49 PF06068.8 gi|21227496|ref|NP_633418.1| - 0.17 10.5 0.2 0.25 10.0 0.1 1.2 1 0 0 1 1 1 0 TIP49 C-terminus Glyoxalase_2 PF12681.2 gi|21227497|ref|NP_633419.1| - 4.4e-21 75.5 0.0 8.1e-21 74.6 0.0 1.4 2 0 0 2 2 2 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|21227497|ref|NP_633419.1| - 4.7e-06 26.6 0.2 0.00026 20.9 0.2 2.4 2 1 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNA_primase_lrg PF04104.9 gi|21227498|ref|NP_633420.1| - 4.8e-35 121.0 0.0 8.3e-35 120.3 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit DUF1805 PF08827.6 gi|21227498|ref|NP_633420.1| - 0.03 14.1 0.0 0.25 11.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) PCNA_N PF00705.13 gi|21227499|ref|NP_633421.1| - 7.2e-13 48.1 0.5 1.5e-12 47.0 0.1 1.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|21227499|ref|NP_633421.1| - 1.3e-10 41.2 0.0 4.5e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.8 gi|21227499|ref|NP_633421.1| - 3.2e-05 23.2 0.0 0.0003 19.9 0.0 2.0 2 0 0 2 2 2 1 Rad9 DNA_pol3_beta_3 PF02768.10 gi|21227499|ref|NP_633421.1| - 0.46 10.0 1.7 3.5 7.2 0.3 2.7 2 2 0 2 2 2 0 DNA polymerase III beta subunit, C-terminal domain TFIIS_C PF01096.13 gi|21227500|ref|NP_633422.1| - 1.3e-18 66.3 3.8 1.3e-18 66.3 2.6 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.11 gi|21227500|ref|NP_633422.1| - 1.3e-08 34.4 17.8 2e-08 33.7 1.9 3.1 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|21227500|ref|NP_633422.1| - 4.8e-07 29.4 6.6 0.0022 17.7 0.8 2.3 2 0 0 2 2 2 2 Double zinc ribbon Zn_Tnp_IS1595 PF12760.2 gi|21227500|ref|NP_633422.1| - 0.0002 21.0 11.6 0.00022 20.9 0.6 2.5 2 1 0 2 2 2 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|21227500|ref|NP_633422.1| - 0.001 18.6 10.9 0.0037 16.8 1.1 2.5 1 1 1 2 2 2 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|21227500|ref|NP_633422.1| - 0.0013 18.1 16.4 0.37 10.3 2.8 3.7 3 1 0 3 3 3 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|21227500|ref|NP_633422.1| - 0.0014 17.8 11.0 0.021 14.1 0.9 2.9 2 2 0 2 2 2 2 TFIIB zinc-binding Ogr_Delta PF04606.7 gi|21227500|ref|NP_633422.1| - 0.0016 18.0 0.7 0.0016 18.0 0.5 2.9 3 0 0 3 3 3 1 Ogr/Delta-like zinc finger zf-ribbon_3 PF13248.1 gi|21227500|ref|NP_633422.1| - 0.0022 17.1 11.2 0.71 9.1 0.3 4.0 4 0 0 4 4 4 1 zinc-ribbon domain DUF2387 PF09526.5 gi|21227500|ref|NP_633422.1| - 0.0029 17.4 0.2 0.0029 17.4 0.1 2.4 2 1 0 2 2 2 1 Probable metal-binding protein (DUF2387) C1_1 PF00130.17 gi|21227500|ref|NP_633422.1| - 0.01 15.5 6.4 0.55 10.0 1.0 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) UPF0547 PF10571.4 gi|21227500|ref|NP_633422.1| - 0.011 15.3 9.0 0.33 10.7 0.0 3.7 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 zinc-ribbons_6 PF07191.7 gi|21227500|ref|NP_633422.1| - 0.012 15.3 0.7 0.012 15.3 0.5 2.7 2 1 1 3 3 3 0 zinc-ribbons DNA_RNApol_7kD PF03604.8 gi|21227500|ref|NP_633422.1| - 0.015 14.7 9.7 0.69 9.4 0.1 3.9 4 0 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_5 PF13719.1 gi|21227500|ref|NP_633422.1| - 0.017 14.7 11.9 0.26 10.8 0.3 4.2 3 1 0 3 3 3 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|21227500|ref|NP_633422.1| - 0.019 14.7 7.5 0.32 10.7 0.4 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.5 gi|21227500|ref|NP_633422.1| - 0.027 14.4 13.8 2.7 8.0 0.1 4.1 4 0 0 4 4 4 0 Zinc ribbon domain HypA PF01155.14 gi|21227500|ref|NP_633422.1| - 0.033 13.8 9.8 0.27 10.9 0.7 3.0 1 1 1 3 3 3 0 Hydrogenase expression/synthesis hypA family zinc_ribbon_4 PF13717.1 gi|21227500|ref|NP_633422.1| - 0.035 13.8 12.8 0.29 10.8 0.4 4.1 4 0 0 4 4 4 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|21227500|ref|NP_633422.1| - 0.059 13.0 9.5 3 7.6 0.7 3.9 3 1 0 3 3 3 0 Nudix N-terminal Lar_restr_allev PF14354.1 gi|21227500|ref|NP_633422.1| - 0.069 13.4 7.7 0.11 12.7 0.4 2.8 1 1 0 2 2 2 0 Restriction alleviation protein Lar FYVE PF01363.16 gi|21227500|ref|NP_633422.1| - 0.096 12.5 9.2 0.73 9.7 6.4 2.3 1 1 0 1 1 1 0 FYVE zinc finger GFA PF04828.9 gi|21227500|ref|NP_633422.1| - 0.14 12.1 12.3 2.5 8.1 0.0 3.8 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme Terminase_GpA PF05876.7 gi|21227500|ref|NP_633422.1| - 0.15 10.3 6.6 0.092 11.0 1.4 2.0 1 1 0 2 2 2 0 Phage terminase large subunit (GpA) DUF3797 PF12677.2 gi|21227500|ref|NP_633422.1| - 0.16 11.5 0.2 0.16 11.5 0.1 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF3797) FdhE PF04216.7 gi|21227500|ref|NP_633422.1| - 0.18 11.4 3.4 0.095 12.4 0.6 1.8 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation Stc1 PF12898.2 gi|21227500|ref|NP_633422.1| - 0.19 11.7 6.1 3.1 7.9 0.6 2.4 1 1 1 2 2 2 0 Stc1 domain Ribosomal_S27e PF01667.12 gi|21227500|ref|NP_633422.1| - 0.26 10.8 6.3 3.1 7.3 0.0 3.4 3 1 0 3 3 3 0 Ribosomal protein S27 zf-UBP PF02148.14 gi|21227500|ref|NP_633422.1| - 0.4 10.8 2.9 19 5.4 0.1 2.6 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-ISL3 PF14690.1 gi|21227500|ref|NP_633422.1| - 0.4 10.7 10.0 9.9 6.2 0.0 4.0 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Baculo_LEF5_C PF11792.3 gi|21227500|ref|NP_633422.1| - 0.56 9.6 0.1 0.56 9.6 0.1 3.6 4 0 0 4 4 3 0 Baculoviridae late expression factor 5 C-terminal domain PolC_DP2 PF03833.8 gi|21227500|ref|NP_633422.1| - 0.71 7.4 5.1 0.11 10.1 0.3 1.7 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 ArfGap PF01412.13 gi|21227500|ref|NP_633422.1| - 0.75 9.5 5.7 0.61 9.8 0.3 2.4 2 1 0 2 2 2 0 Putative GTPase activating protein for Arf TerY-C PF15616.1 gi|21227500|ref|NP_633422.1| - 0.78 9.6 8.3 22 4.9 5.7 2.2 1 1 0 1 1 1 0 TerY-C metal binding domain zf-H2C2_2 PF13465.1 gi|21227500|ref|NP_633422.1| - 1.4 9.3 14.2 1.9 8.9 0.4 3.7 3 1 1 4 4 3 0 Zinc-finger double domain zf-RING_4 PF14570.1 gi|21227500|ref|NP_633422.1| - 1.4 8.5 10.9 1.9 8.1 0.1 3.2 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain YhfH PF14149.1 gi|21227500|ref|NP_633422.1| - 1.5 8.7 12.3 11 5.8 0.1 3.8 3 1 1 4 4 3 0 YhfH-like protein Auto_anti-p27 PF06677.7 gi|21227500|ref|NP_633422.1| - 1.9 8.3 19.2 0.25 11.1 4.8 3.3 3 1 1 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) A2L_zn_ribbon PF08792.5 gi|21227500|ref|NP_633422.1| - 2.3 7.7 15.8 0.18 11.2 1.2 3.4 3 1 0 3 3 3 0 A2L zinc ribbon domain IBR PF01485.16 gi|21227500|ref|NP_633422.1| - 2.6 8.0 14.6 3.5e+03 -2.1 10.1 3.2 1 1 0 1 1 0 0 IBR domain zf-LITAF-like PF10601.4 gi|21227500|ref|NP_633422.1| - 2.7 7.9 8.7 22 5.0 0.0 3.2 3 1 0 3 3 3 0 LITAF-like zinc ribbon domain Mcm10 PF09332.6 gi|21227500|ref|NP_633422.1| - 3.6 6.8 5.5 0.97 8.7 0.1 2.4 3 0 0 3 3 3 0 Mcm10 replication factor DUF35_N PF12172.3 gi|21227500|ref|NP_633422.1| - 3.7 7.5 9.7 6 6.9 0.5 3.6 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rpr2 PF04032.11 gi|21227500|ref|NP_633422.1| - 3.9 7.4 10.1 6.8e+02 0.2 7.0 2.9 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-AN1 PF01428.11 gi|21227500|ref|NP_633422.1| - 4 7.3 13.5 17 5.3 2.7 3.2 3 0 0 3 3 3 0 AN1-like Zinc finger PADR1 PF08063.7 gi|21227500|ref|NP_633422.1| - 4.2 6.8 9.8 7.6 6.0 1.7 2.9 3 0 0 3 3 3 0 PADR1 (NUC008) domain DUF2318 PF10080.4 gi|21227500|ref|NP_633422.1| - 5 6.9 7.2 0.4 10.4 0.8 2.3 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf-C2H2_4 PF13894.1 gi|21227500|ref|NP_633422.1| - 5.1 7.6 9.5 24 5.5 0.0 4.0 4 0 0 4 4 4 0 C2H2-type zinc finger Baculo_ME53 PF06061.6 gi|21227500|ref|NP_633422.1| - 5.4 5.9 7.2 0.98 8.3 0.2 2.3 2 1 0 2 2 2 0 Baculoviridae ME53 Tnp_zf-ribbon_2 PF13842.1 gi|21227500|ref|NP_633422.1| - 5.9 7.3 10.6 22 5.5 0.0 3.4 3 1 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon zf-C4_Topoisom PF01396.14 gi|21227500|ref|NP_633422.1| - 6.1 6.4 12.6 1.6 8.3 0.6 3.8 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Rep_fac-A_C PF08646.5 gi|21227500|ref|NP_633422.1| - 7.3 6.2 9.7 0.23 11.1 0.8 2.3 1 1 0 2 2 2 0 Replication factor-A C terminal domain zf-UBR PF02207.15 gi|21227500|ref|NP_633422.1| - 9.2 6.0 9.9 8.5 6.1 2.3 2.8 1 1 1 2 2 2 0 Putative zinc finger in N-recognin (UBR box) NUDIX PF00293.23 gi|21227501|ref|NP_633423.1| - 3.5e-19 68.7 0.0 4.1e-19 68.5 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain Exosortase_EpsH PF09721.5 gi|21227503|ref|NP_633425.1| - 1.2e-57 195.1 20.0 1.4e-57 194.8 13.9 1.0 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) PS_Dcarbxylase PF02666.10 gi|21227504|ref|NP_633426.1| - 2.3e-31 108.6 1.9 1.7e-25 89.5 0.2 2.0 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase RnfC_N PF13375.1 gi|21227504|ref|NP_633426.1| - 0.0014 18.3 0.7 5.7 6.7 0.0 3.8 1 1 3 4 4 4 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.17 gi|21227504|ref|NP_633426.1| - 0.022 14.8 0.5 4.5 7.3 0.1 3.1 1 1 2 3 3 3 0 Peptidase family M23 HlyD_3 PF13437.1 gi|21227504|ref|NP_633426.1| - 0.11 12.8 0.6 2.6 8.4 0.0 3.0 3 1 1 4 4 4 0 HlyD family secretion protein CDP-OH_P_transf PF01066.16 gi|21227505|ref|NP_633427.1| - 2.2e-13 50.3 7.2 2.2e-13 50.3 5.0 2.7 1 1 1 2 2 2 1 CDP-alcohol phosphatidyltransferase Chitin_synth_2 PF03142.10 gi|21227505|ref|NP_633427.1| - 0.39 9.0 4.0 0.51 8.6 2.8 1.1 1 0 0 1 1 1 0 Chitin synthase DUF381 PF04038.7 gi|21227506|ref|NP_633428.1| - 1.7e-28 98.4 0.7 2.3e-28 97.9 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF381) DUF372 PF04036.7 gi|21227506|ref|NP_633428.1| - 1e-22 79.3 0.0 1.4e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF372) Aminotran_1_2 PF00155.16 gi|21227507|ref|NP_633429.1| - 3.1e-62 210.6 0.0 3.5e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|21227507|ref|NP_633429.1| - 3.1e-11 42.9 0.0 4.3e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|21227507|ref|NP_633429.1| - 3e-07 29.5 0.0 1.2e-06 27.5 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.8 gi|21227507|ref|NP_633429.1| - 0.0003 19.5 0.0 0.00054 18.7 0.0 1.3 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.15 gi|21227507|ref|NP_633429.1| - 0.0012 17.2 0.0 0.0019 16.5 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_3 PF00202.16 gi|21227508|ref|NP_633430.1| - 6.7e-108 360.5 1.0 8e-108 360.2 0.7 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|21227508|ref|NP_633430.1| - 2.9e-06 26.4 0.0 4.8e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|21227508|ref|NP_633430.1| - 2e-05 23.9 0.2 3.8e-05 22.9 0.0 1.5 2 0 0 2 2 2 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|21227508|ref|NP_633430.1| - 0.00017 20.0 0.0 0.00022 19.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|21227508|ref|NP_633430.1| - 0.0025 16.9 3.5 0.0026 16.8 1.2 2.0 1 1 1 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|21227508|ref|NP_633430.1| - 0.0083 14.9 0.1 0.033 12.9 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Hexapep PF00132.19 gi|21227509|ref|NP_633431.1| - 5e-07 28.9 24.2 9.4e-06 24.9 0.0 6.6 6 1 0 6 6 6 3 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.8 gi|21227509|ref|NP_633431.1| - 4.7e-06 26.5 17.1 4.7e-05 23.3 2.7 3.6 2 2 1 3 3 3 3 Polymer-forming cytoskeletal DUF3494 PF11999.3 gi|21227509|ref|NP_633431.1| - 0.15 11.6 1.1 0.64 9.6 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3494) Fucokinase PF07959.7 gi|21227509|ref|NP_633431.1| - 4.5 5.7 6.7 9.6 4.6 0.5 2.6 2 1 1 3 3 3 0 L-fucokinase TGT_C2 PF14810.1 gi|21227510|ref|NP_633432.1| - 1.6e-30 104.7 0.1 2.9e-30 103.9 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|21227510|ref|NP_633432.1| - 2.5e-16 59.1 0.1 5.6e-16 58.0 0.1 1.6 1 0 0 1 1 1 1 PUA domain RHH_1 PF01402.16 gi|21227511|ref|NP_633433.1| - 0.022 14.6 0.1 0.078 12.8 0.1 2.0 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family FlaG PF03646.10 gi|21227512|ref|NP_633434.1| - 0.12 12.5 0.2 3.8 7.6 0.0 2.6 2 1 1 3 3 3 0 FlaG protein DUF1894 PF08979.6 gi|21227515|ref|NP_633437.1| - 9.6e-32 108.8 0.1 1.1e-31 108.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.6 gi|21227516|ref|NP_633438.1| - 3.4e-59 198.8 0.3 3.9e-59 198.6 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) B12-binding PF02310.14 gi|21227516|ref|NP_633438.1| - 0.0033 17.3 0.0 0.0049 16.7 0.0 1.3 1 1 0 1 1 1 1 B12 binding domain DUF2870 PF11069.3 gi|21227516|ref|NP_633438.1| - 0.0081 16.1 0.0 0.023 14.7 0.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF2870) DUF1894 PF08979.6 gi|21227517|ref|NP_633439.1| - 3.5e-37 126.3 0.1 4.2e-37 126.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) AIRS_C PF02769.17 gi|21227518|ref|NP_633440.1| - 5.7e-17 62.1 0.0 1.1e-16 61.2 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|21227518|ref|NP_633440.1| - 1e-15 57.7 0.2 1.9e-15 56.8 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain S4 PF01479.20 gi|21227518|ref|NP_633440.1| - 0.023 14.1 0.3 0.053 12.9 0.2 1.6 1 0 0 1 1 1 0 S4 domain AA_kinase PF00696.23 gi|21227519|ref|NP_633441.1| - 7e-53 179.6 0.8 1.2e-52 178.8 0.1 1.7 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.1 gi|21227519|ref|NP_633441.1| - 7e-26 89.5 3.6 8.5e-13 47.6 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.20 gi|21227519|ref|NP_633441.1| - 1.5e-24 84.9 0.6 1.1e-11 43.9 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.1 gi|21227519|ref|NP_633441.1| - 0.00023 20.8 2.6 0.025 14.2 0.0 3.6 3 0 0 3 3 3 1 ACT domain PPK2 PF03976.9 gi|21227519|ref|NP_633441.1| - 0.014 14.6 0.1 3.1 7.0 0.0 2.4 1 1 1 2 2 2 0 Polyphosphate kinase 2 (PPK2) HAD_2 PF13419.1 gi|21227519|ref|NP_633441.1| - 0.091 12.9 0.0 30 4.7 0.0 3.3 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase PhosphMutase PF10143.4 gi|161485676|ref|NP_633442.2| - 2.8e-57 193.0 0.0 4.9e-57 192.3 0.0 1.4 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|161485676|ref|NP_633442.2| - 2.7e-45 154.7 0.0 3.4e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.15 gi|161485676|ref|NP_633442.2| - 0.027 13.1 0.1 0.14 10.8 0.0 1.8 2 0 0 2 2 2 0 Alkaline phosphatase HSP20 PF00011.16 gi|21227521|ref|NP_633443.1| - 5.4e-22 77.5 0.7 6.6e-22 77.3 0.5 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|21227521|ref|NP_633443.1| - 0.00033 21.1 0.0 0.0029 18.0 0.0 2.1 1 1 0 1 1 1 1 CS domain GvpH PF05455.6 gi|21227521|ref|NP_633443.1| - 0.088 12.4 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 GvpH RecX PF02631.11 gi|21227522|ref|NP_633444.1| - 0.087 13.0 0.3 0.14 12.3 0.1 1.5 2 0 0 2 2 2 0 RecX family F420_ligase PF01996.11 gi|21227523|ref|NP_633445.1| - 9e-67 224.4 0.1 1e-66 224.2 0.1 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase ScdA_N PF04405.9 gi|21227523|ref|NP_633445.1| - 0.055 12.8 0.0 0.24 10.8 0.0 2.0 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) Cupin_2 PF07883.6 gi|21227524|ref|NP_633446.1| - 1.9e-07 30.4 0.0 2.8e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.7 gi|21227524|ref|NP_633446.1| - 0.0018 17.8 0.1 0.002 17.6 0.1 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding PF02311.14 gi|21227524|ref|NP_633446.1| - 0.028 14.1 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF1255 PF06865.6 gi|21227524|ref|NP_633446.1| - 0.086 13.1 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1255) Cupin_6 PF12852.2 gi|21227524|ref|NP_633446.1| - 0.12 11.9 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Cupin dCMP_cyt_deam_1 PF00383.17 gi|21227525|ref|NP_633447.1| - 2.6e-29 100.8 1.4 3.2e-29 100.5 1.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region XOO_2897-deam PF14440.1 gi|21227525|ref|NP_633447.1| - 6.1e-05 22.7 0.0 6.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Xanthomonas XOO_2897-like deaminase APOBEC_N PF08210.6 gi|21227525|ref|NP_633447.1| - 0.00021 20.9 1.4 0.00032 20.3 1.0 1.2 1 0 0 1 1 1 1 APOBEC-like N-terminal domain Bd3614-deam PF14439.1 gi|21227525|ref|NP_633447.1| - 0.0012 18.7 0.6 0.0027 17.5 0.4 1.6 1 1 1 2 2 2 1 Bd3614-like deaminase MafB19-deam PF14437.1 gi|21227525|ref|NP_633447.1| - 0.018 14.7 0.9 0.024 14.2 0.6 1.2 1 0 0 1 1 1 0 MafB19-like deaminase zf-C3HC4 PF00097.20 gi|21227525|ref|NP_633447.1| - 0.064 12.9 3.5 0.19 11.3 2.4 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SecD_SecF PF02355.11 gi|21227526|ref|NP_633448.1| - 1.7e-37 128.4 12.1 2.7e-37 127.8 8.4 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|21227526|ref|NP_633448.1| - 1.7e-05 23.7 0.1 5.4e-05 22.1 0.0 2.0 2 0 0 2 2 2 1 SecD/SecF GG Motif Patched PF02460.13 gi|21227526|ref|NP_633448.1| - 0.13 10.1 13.7 0.19 9.5 9.5 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.11 gi|21227527|ref|NP_633449.1| - 3.9e-14 52.2 7.6 6.5e-14 51.5 5.3 1.2 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|21227527|ref|NP_633449.1| - 3.9e-05 22.6 0.2 0.00013 21.0 0.1 2.0 1 0 0 1 1 1 1 SecD/SecF GG Motif DNA_pol3_delta2 PF13177.1 gi|21227528|ref|NP_633450.1| - 7.3e-17 61.4 0.0 9.9e-17 61.0 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.6 gi|21227528|ref|NP_633450.1| - 6.7e-16 58.0 0.2 1.9e-15 56.5 0.0 1.8 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA PF00004.24 gi|21227528|ref|NP_633450.1| - 8.6e-11 42.1 0.0 1.9e-10 41.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|21227528|ref|NP_633450.1| - 6.3e-08 32.8 0.0 2.9e-07 30.6 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|21227528|ref|NP_633450.1| - 4e-06 26.7 0.1 1.5e-05 24.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21227528|ref|NP_633450.1| - 0.00021 22.1 0.1 0.0005 20.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|21227528|ref|NP_633450.1| - 0.00057 19.3 0.0 0.0023 17.3 0.0 2.0 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.7 gi|21227528|ref|NP_633450.1| - 0.0011 18.0 0.0 0.14 11.1 0.0 2.7 2 1 1 3 3 3 1 Holliday junction DNA helicase ruvB N-terminus DNA_pol3_delta PF06144.8 gi|21227528|ref|NP_633450.1| - 0.0019 17.7 0.0 0.01 15.3 0.0 2.1 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Arch_ATPase PF01637.13 gi|21227528|ref|NP_633450.1| - 0.0038 16.9 0.0 0.0082 15.8 0.0 1.6 1 1 0 1 1 1 1 Archaeal ATPase TIP49 PF06068.8 gi|21227528|ref|NP_633450.1| - 0.0063 15.2 0.0 0.014 14.0 0.0 1.5 1 0 0 1 1 1 1 TIP49 C-terminus Rad17 PF03215.10 gi|21227528|ref|NP_633450.1| - 0.0064 15.2 0.0 0.083 11.5 0.0 2.1 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein AAA_16 PF13191.1 gi|21227528|ref|NP_633450.1| - 0.0066 16.4 0.3 0.05 13.5 0.2 2.5 1 1 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.17 gi|21227528|ref|NP_633450.1| - 0.03 14.5 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Sigma54_activ_2 PF14532.1 gi|21227528|ref|NP_633450.1| - 0.035 14.1 0.0 0.22 11.5 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_33 PF13671.1 gi|21227528|ref|NP_633450.1| - 0.074 12.9 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|21227528|ref|NP_633450.1| - 0.081 13.2 0.0 0.24 11.7 0.0 1.9 1 1 0 1 1 1 0 AAA domain Peptidase_C39_2 PF13529.1 gi|21227529|ref|NP_633451.1| - 0.0059 16.9 1.2 0.016 15.5 0.9 1.7 1 1 0 1 1 1 1 Peptidase_C39 like family UPF0228 PF05727.6 gi|21227530|ref|NP_633452.1| - 1e-52 177.1 4.3 1.5e-52 176.7 3.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) HTH_19 PF12844.2 gi|21227530|ref|NP_633452.1| - 0.0066 16.4 0.2 0.031 14.3 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain DUF4373 PF14297.1 gi|21227530|ref|NP_633452.1| - 0.0077 16.4 0.1 1.5 9.1 0.0 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4373) Ofd1_CTDD PF10637.4 gi|21227530|ref|NP_633452.1| - 0.061 12.4 0.3 0.078 12.0 0.2 1.2 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term DDE_Tnp_1 PF01609.16 gi|21227531|ref|NP_633453.1| - 1.2e-07 31.4 4.8 3.8e-07 29.8 3.3 1.6 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.1 gi|21227531|ref|NP_633453.1| - 0.006 16.7 1.1 0.0097 16.0 0.8 1.4 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_6 PF13751.1 gi|21227531|ref|NP_633453.1| - 0.014 15.4 2.7 0.02 14.8 1.9 1.3 1 0 0 1 1 1 0 Transposase DDE domain DUF4309 PF14172.1 gi|21227531|ref|NP_633453.1| - 0.077 12.9 0.8 0.12 12.3 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Transposase_20 PF02371.11 gi|21227532|ref|NP_633454.1| - 1.2e-29 102.1 0.0 1.8e-29 101.6 0.0 1.3 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21227533|ref|NP_633455.1| - 6e-27 94.0 0.1 7.7e-27 93.7 0.1 1.1 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21227533|ref|NP_633455.1| - 0.0091 16.0 0.0 0.024 14.7 0.0 1.7 1 0 0 1 1 1 1 Orthopoxvirus F14 protein Cytochrom_C_asm PF01578.15 gi|21227535|ref|NP_633457.1| - 0.054 13.0 1.3 0.07 12.6 0.9 1.2 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF3671 PF12420.3 gi|21227535|ref|NP_633457.1| - 0.24 11.4 1.9 0.29 11.1 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function SUR7 PF06687.7 gi|21227535|ref|NP_633457.1| - 0.88 9.0 4.7 1 8.9 3.3 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF4282 PF14110.1 gi|21227535|ref|NP_633457.1| - 1.9 8.7 7.2 2.6 8.3 5.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) ATG22 PF11700.3 gi|21227536|ref|NP_633458.1| - 0.036 12.5 0.6 0.039 12.4 0.4 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like DUF2207 PF09972.4 gi|21227536|ref|NP_633458.1| - 0.21 10.1 0.7 0.21 10.1 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AA_permease PF00324.16 gi|21227537|ref|NP_633459.1| - 1.5e-40 138.9 46.6 2e-40 138.5 32.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|21227537|ref|NP_633459.1| - 1.2e-24 86.7 44.8 2e-24 85.9 30.4 1.6 1 1 1 2 2 2 1 Amino acid permease Herpes_LMP1 PF05297.6 gi|21227537|ref|NP_633459.1| - 0.001 18.0 3.5 0.001 18.0 2.4 2.9 3 0 0 3 3 3 1 Herpesvirus latent membrane protein 1 (LMP1) Peptidase_M50 PF02163.17 gi|21227537|ref|NP_633459.1| - 0.17 10.7 2.3 8.9 5.2 0.1 3.2 1 1 1 2 2 2 0 Peptidase family M50 MtmB PF05369.7 gi|21227538|ref|NP_633460.1| - 7.7e-165 548.4 2.8 8.6e-165 548.3 1.9 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB MtmB PF05369.7 gi|21227539|ref|NP_633461.1| - 6.8e-143 476.1 0.9 7.6e-143 475.9 0.6 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB B12-binding_2 PF02607.12 gi|21227540|ref|NP_633462.1| - 6.8e-20 70.8 0.0 1.5e-19 69.7 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|21227540|ref|NP_633462.1| - 8.5e-17 61.1 0.2 1.4e-16 60.4 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain Rep_fac_C PF08542.6 gi|21227540|ref|NP_633462.1| - 0.03 14.3 0.0 0.07 13.1 0.0 1.7 1 0 0 1 1 1 0 Replication factor C C-terminal domain RsbU_N PF08673.5 gi|21227540|ref|NP_633462.1| - 0.047 13.6 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain URO-D PF01208.12 gi|21227541|ref|NP_633463.1| - 1.8e-86 290.1 0.1 2.1e-86 290.0 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) DUF4445 PF14574.1 gi|21227542|ref|NP_633464.1| - 6.2e-111 370.5 1.6 9.1e-111 369.9 1.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer4 PF00037.22 gi|21227542|ref|NP_633464.1| - 2.6e-10 39.4 9.6 1.2e-05 24.7 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227542|ref|NP_633464.1| - 4e-09 35.9 11.2 3.1e-06 26.7 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227542|ref|NP_633464.1| - 5.3e-09 36.3 11.4 9.6e-09 35.5 7.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227542|ref|NP_633464.1| - 3.3e-08 33.2 10.8 6.1e-08 32.4 7.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227542|ref|NP_633464.1| - 6.2e-08 32.3 9.9 1.4e-07 31.2 6.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227542|ref|NP_633464.1| - 1.7e-07 31.4 12.1 3e-07 30.5 8.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227542|ref|NP_633464.1| - 1.5e-06 27.7 12.6 0.00074 19.2 1.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227542|ref|NP_633464.1| - 3.5e-06 27.6 12.3 0.00026 21.6 8.7 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21227542|ref|NP_633464.1| - 8e-05 22.5 11.1 0.00015 21.6 7.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227542|ref|NP_633464.1| - 0.0016 18.6 13.4 0.02 15.1 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21227542|ref|NP_633464.1| - 0.006 17.0 14.9 0.19 12.3 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21227542|ref|NP_633464.1| - 0.092 12.6 5.2 0.17 11.8 3.6 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21227542|ref|NP_633464.1| - 0.18 12.2 12.9 0.41 11.0 1.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227542|ref|NP_633464.1| - 1 9.7 15.2 1.6 9.1 3.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227542|ref|NP_633464.1| - 2 9.0 9.8 8.9 6.9 6.8 2.1 1 1 0 1 1 1 0 4Fe-4S single cluster domain Pyrophosphatase PF00719.14 gi|161485675|ref|NP_633465.2| - 3.2e-58 195.5 0.1 3.8e-58 195.3 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase NAD_binding_2 PF03446.10 gi|21227544|ref|NP_633466.1| - 0.0008 19.2 0.0 0.0022 17.8 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|21227544|ref|NP_633466.1| - 0.086 12.2 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|21227544|ref|NP_633466.1| - 0.13 11.9 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mur_ligase PF01225.20 gi|21227544|ref|NP_633466.1| - 0.14 12.2 0.1 10 6.2 0.0 2.4 1 1 1 2 2 2 0 Mur ligase family, catalytic domain ATP-grasp_4 PF13535.1 gi|21227545|ref|NP_633467.1| - 1.3e-12 47.8 0.0 3.1e-12 46.6 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|21227545|ref|NP_633467.1| - 6.3e-09 35.8 0.0 1.2e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|21227545|ref|NP_633467.1| - 0.0013 18.1 0.0 0.0028 17.0 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Pyr_redox PF00070.22 gi|21227545|ref|NP_633467.1| - 0.046 14.1 0.0 0.12 12.7 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21227545|ref|NP_633467.1| - 0.09 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_8 PF13450.1 gi|21227545|ref|NP_633467.1| - 0.13 12.3 0.0 0.3 11.1 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Radical_SAM PF04055.16 gi|21227546|ref|NP_633468.1| - 1.3e-09 38.4 0.4 5.8e-09 36.3 0.1 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21227546|ref|NP_633468.1| - 1e-05 25.6 0.2 1.9e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain BATS PF06968.8 gi|21227546|ref|NP_633468.1| - 0.0027 17.5 0.1 0.024 14.4 0.0 2.4 3 0 0 3 3 3 1 Biotin and Thiamin Synthesis associated domain Fer4_14 PF13394.1 gi|21227546|ref|NP_633468.1| - 0.0045 17.0 0.2 0.0074 16.2 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain tRNA-synt_2b PF00587.20 gi|21227547|ref|NP_633469.1| - 1.1e-13 51.0 0.0 1.8e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.15 gi|21227547|ref|NP_633469.1| - 3.4e-12 46.0 0.0 5e-09 35.7 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|21227547|ref|NP_633469.1| - 3.8e-10 39.0 0.1 1.2e-08 34.1 0.1 2.6 2 1 0 2 2 2 1 tRNA synthetases class II (D, K and N) tRNA-synt_His PF13393.1 gi|21227547|ref|NP_633469.1| - 0.0032 16.5 0.0 0.0063 15.6 0.0 1.4 1 0 0 1 1 1 1 Histidyl-tRNA synthetase DMAP1 PF05499.7 gi|21227547|ref|NP_633469.1| - 0.0057 16.2 0.5 0.011 15.2 0.3 1.4 1 0 0 1 1 1 1 DNA methyltransferase 1-associated protein 1 (DMAP1) Prenyltrans_2 PF13249.1 gi|21227549|ref|NP_633471.1| - 4.5e-08 33.4 2.9 0.019 15.3 0.0 4.0 2 1 0 2 2 2 2 Prenyltransferase-like Prenyltrans_1 PF13243.1 gi|21227549|ref|NP_633471.1| - 4.1e-05 23.5 1.7 0.02 14.9 0.4 3.0 1 1 1 2 2 2 2 Prenyltransferase-like Prenyltrans PF00432.16 gi|21227549|ref|NP_633471.1| - 0.032 13.7 6.4 2.6 7.6 1.3 4.6 3 1 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat A2M_comp PF07678.9 gi|21227549|ref|NP_633471.1| - 0.09 11.9 0.1 7.8 5.6 0.0 3.2 2 1 1 4 4 4 0 A-macroglobulin complement component DUF134 PF02001.11 gi|21227550|ref|NP_633472.1| - 3.9e-20 71.7 0.1 6.9e-20 70.9 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.7 gi|21227550|ref|NP_633472.1| - 1.1e-05 24.7 0.4 2.1e-05 23.8 0.3 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.11 gi|21227550|ref|NP_633472.1| - 0.00017 20.7 0.2 0.00026 20.2 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_37 PF13744.1 gi|21227550|ref|NP_633472.1| - 0.0011 18.7 0.2 0.0018 18.0 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|21227550|ref|NP_633472.1| - 0.005 16.4 0.0 0.0094 15.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21227550|ref|NP_633472.1| - 0.0091 15.9 0.0 0.02 14.8 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|21227550|ref|NP_633472.1| - 0.013 15.6 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix MarR_2 PF12802.2 gi|21227550|ref|NP_633472.1| - 0.026 14.1 0.1 0.047 13.3 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_30 PF13556.1 gi|21227550|ref|NP_633472.1| - 0.027 14.0 0.1 0.046 13.3 0.1 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Sigma70_ECF PF07638.6 gi|21227550|ref|NP_633472.1| - 0.06 13.0 0.2 0.081 12.5 0.1 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_1 PF00126.22 gi|21227550|ref|NP_633472.1| - 0.08 12.6 0.4 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_10 PF04967.7 gi|21227550|ref|NP_633472.1| - 0.1 12.1 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Radical_SAM PF04055.16 gi|21227552|ref|NP_633474.1| - 7.6e-12 45.7 0.1 1.8e-11 44.5 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily TrmB PF01978.14 gi|21227552|ref|NP_633474.1| - 0.034 13.8 0.0 0.1 12.3 0.0 1.9 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Usp PF00582.21 gi|21227553|ref|NP_633475.1| - 2.6e-31 108.7 0.0 3.3e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|21227554|ref|NP_633476.1| - 3.8e-74 247.5 5.5 1.3e-36 125.8 0.4 2.0 2 0 0 2 2 2 2 Universal stress protein family GARS_N PF02844.10 gi|21227554|ref|NP_633476.1| - 2.2e-05 24.8 0.4 0.38 11.2 0.0 2.6 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, N domain B12-binding PF02310.14 gi|21227554|ref|NP_633476.1| - 0.0012 18.6 0.3 1.6 8.6 0.0 2.4 2 0 0 2 2 2 2 B12 binding domain Nitro_FeMo-Co PF02579.12 gi|21227554|ref|NP_633476.1| - 0.0032 17.4 2.3 1 9.4 0.1 3.7 2 2 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor Toprim_4 PF13662.1 gi|21227554|ref|NP_633476.1| - 0.0041 17.1 3.8 0.25 11.3 0.0 3.5 3 1 1 4 4 4 1 Toprim domain NIF3 PF01784.13 gi|21227554|ref|NP_633476.1| - 0.0066 16.0 1.0 3.2 7.2 0.1 2.5 2 0 0 2 2 2 2 NIF3 (NGG1p interacting factor 3) PGM_PMM_I PF02878.11 gi|21227554|ref|NP_633476.1| - 0.0082 15.6 0.1 3.9 6.9 0.0 2.7 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CoA_binding_3 PF13727.1 gi|21227554|ref|NP_633476.1| - 0.011 15.6 0.5 2.1 8.1 0.0 2.3 2 0 0 2 2 2 0 CoA-binding domain PPDK_N PF01326.14 gi|21227554|ref|NP_633476.1| - 0.025 13.6 0.0 0.88 8.5 0.0 2.1 2 0 0 2 2 2 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VWA_2 PF13519.1 gi|21227554|ref|NP_633476.1| - 0.058 13.4 0.2 0.34 10.9 0.1 2.4 1 1 0 1 1 1 0 von Willebrand factor type A domain GTP-bdg_N PF13167.1 gi|21227554|ref|NP_633476.1| - 0.059 13.4 0.6 6.1 7.0 0.0 2.4 2 0 0 2 2 2 0 GTP-binding GTPase N-terminal Usp PF00582.21 gi|21227555|ref|NP_633477.1| - 1.7e-38 131.9 0.1 1.9e-38 131.8 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Toprim_4 PF13662.1 gi|21227555|ref|NP_633477.1| - 0.062 13.3 0.3 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 Toprim domain Nitro_FeMo-Co PF02579.12 gi|21227555|ref|NP_633477.1| - 0.067 13.2 0.1 0.2 11.7 0.0 1.8 1 1 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor GARS_N PF02844.10 gi|21227555|ref|NP_633477.1| - 0.093 13.2 0.2 0.37 11.2 0.1 2.0 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, N domain MGS PF02142.17 gi|21227555|ref|NP_633477.1| - 0.11 12.4 0.4 0.61 10.0 0.0 2.2 1 1 0 2 2 2 0 MGS-like domain PUD PF03714.9 gi|21227555|ref|NP_633477.1| - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial pullanase-associated domain Usp PF00582.21 gi|21227556|ref|NP_633478.1| - 3.4e-38 130.9 0.0 3.8e-38 130.8 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.21 gi|21227557|ref|NP_633479.1| - 2.5e-38 131.4 0.2 2.8e-38 131.2 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Nitro_FeMo-Co PF02579.12 gi|21227557|ref|NP_633479.1| - 0.044 13.8 0.3 0.086 12.9 0.0 1.7 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor DNA_photolyase PF00875.13 gi|21227557|ref|NP_633479.1| - 0.079 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase Usp PF00582.21 gi|21227558|ref|NP_633480.1| - 4.2e-38 130.6 0.1 4.8e-38 130.5 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Nitro_FeMo-Co PF02579.12 gi|21227558|ref|NP_633480.1| - 0.11 12.6 0.1 0.37 10.8 0.0 1.9 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor TfuA PF07812.7 gi|21227559|ref|NP_633481.1| - 1.1e-45 153.9 0.0 3.1e-45 152.4 0.0 1.8 2 0 0 2 2 2 1 TfuA-like protein SHOCT PF09851.4 gi|21227559|ref|NP_633481.1| - 6.3 6.4 6.9 2.8 7.5 0.6 2.9 3 0 0 3 3 3 0 Short C-terminal domain YcaO PF02624.11 gi|21227560|ref|NP_633482.1| - 3.9e-85 286.2 0.0 4.8e-85 285.9 0.0 1.1 1 0 0 1 1 1 1 YcaO-like family DUF2892 PF11127.3 gi|21227561|ref|NP_633483.1| - 3.1e-15 55.7 0.2 3.9e-15 55.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Kei1 PF08552.6 gi|21227561|ref|NP_633483.1| - 0.03 13.9 0.3 0.033 13.8 0.2 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 DUF3017 PF11222.3 gi|21227561|ref|NP_633483.1| - 0.052 13.3 0.6 0.066 13.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3017) DUF4234 PF14018.1 gi|21227561|ref|NP_633483.1| - 0.18 11.5 0.4 0.18 11.5 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4234) Terminase_GpA PF05876.7 gi|21227562|ref|NP_633484.1| - 0.005 15.2 0.8 0.005 15.2 0.6 1.0 1 0 0 1 1 1 1 Phage terminase large subunit (GpA) zf-ribbon_3 PF13248.1 gi|21227562|ref|NP_633484.1| - 0.0056 15.8 1.0 0.75 9.0 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zf-RING_4 PF14570.1 gi|21227562|ref|NP_633484.1| - 0.0073 15.8 4.3 0.38 10.3 0.3 2.9 3 0 0 3 3 3 1 RING/Ubox like zinc-binding domain Pox_F17 PF04767.7 gi|21227562|ref|NP_633484.1| - 0.016 15.4 1.3 0.018 15.2 0.9 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein zf-Di19 PF05605.7 gi|21227562|ref|NP_633484.1| - 0.018 15.1 1.8 0.41 10.7 0.0 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding GILT PF03227.11 gi|21227562|ref|NP_633484.1| - 0.023 14.5 0.8 0.12 12.2 0.5 1.8 1 1 1 2 2 2 0 Gamma interferon inducible lysosomal thiol reductase (GILT) zf-H2C2_2 PF13465.1 gi|21227562|ref|NP_633484.1| - 0.025 14.8 2.7 0.48 10.8 0.3 2.4 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2_jaz PF12171.3 gi|21227562|ref|NP_633484.1| - 0.048 13.8 1.6 1.5 9.0 0.1 2.7 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zinc_ribbon_2 PF13240.1 gi|21227562|ref|NP_633484.1| - 0.055 12.9 2.3 4.3 6.9 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain FANCL_C PF11793.3 gi|21227562|ref|NP_633484.1| - 0.056 13.4 1.2 2.2 8.2 0.0 2.3 2 0 0 2 2 2 0 FANCL C-terminal domain zf-C2H2_4 PF13894.1 gi|21227562|ref|NP_633484.1| - 0.063 13.6 3.8 2.1 8.8 0.7 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger zf-U1 PF06220.7 gi|21227562|ref|NP_633484.1| - 0.088 12.3 0.1 0.088 12.3 0.1 1.6 2 0 0 2 2 1 0 U1 zinc finger CpXC PF14353.1 gi|21227562|ref|NP_633484.1| - 0.13 12.2 1.4 0.33 10.9 1.0 1.7 1 1 0 1 1 1 0 CpXC protein zf-C3HC4_3 PF13920.1 gi|21227562|ref|NP_633484.1| - 0.13 11.9 3.4 1.8 8.2 0.0 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) dCMP_cyt_deam_1 PF00383.17 gi|21227562|ref|NP_633484.1| - 0.15 11.7 0.7 0.2 11.3 0.1 1.6 1 1 1 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region DUF329 PF03884.9 gi|21227562|ref|NP_633484.1| - 0.16 11.5 2.2 3.9 7.1 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF329) DUF4451 PF14616.1 gi|21227562|ref|NP_633484.1| - 0.18 11.5 3.1 1.1 9.0 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) Fer4_14 PF13394.1 gi|21227562|ref|NP_633484.1| - 0.26 11.3 1.9 0.61 10.1 0.9 1.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain zf-FCS PF06467.9 gi|21227562|ref|NP_633484.1| - 0.31 10.7 3.7 3.2 7.4 0.2 2.3 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-C2H2_6 PF13912.1 gi|21227562|ref|NP_633484.1| - 0.34 10.8 2.1 0.54 10.2 0.2 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger UPF0547 PF10571.4 gi|21227562|ref|NP_633484.1| - 0.38 10.4 5.6 1.2 8.8 0.2 2.7 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Thioredoxin_2 PF13098.1 gi|21227562|ref|NP_633484.1| - 0.41 10.8 3.5 0.99 9.6 0.1 2.1 1 1 1 2 2 2 0 Thioredoxin-like domain Thioredoxin_4 PF13462.1 gi|21227562|ref|NP_633484.1| - 0.46 10.4 2.9 7.1 6.6 0.4 2.1 1 1 1 2 2 2 0 Thioredoxin Zn_Tnp_IS1595 PF12760.2 gi|21227562|ref|NP_633484.1| - 0.57 10.0 4.0 8.7 6.2 0.1 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Rad50_zn_hook PF04423.9 gi|21227562|ref|NP_633484.1| - 0.7 9.4 4.0 0.57 9.6 0.1 2.1 1 1 1 2 2 2 0 Rad50 zinc hook motif DZR PF12773.2 gi|21227562|ref|NP_633484.1| - 0.77 9.6 5.1 8.1 6.3 2.9 2.2 1 1 1 2 2 2 0 Double zinc ribbon zinc_ribbon_5 PF13719.1 gi|21227562|ref|NP_633484.1| - 0.83 9.2 6.1 0.98 9.0 1.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Thioredoxin_3 PF13192.1 gi|21227562|ref|NP_633484.1| - 2.4 8.0 4.1 21 5.0 0.1 2.2 1 1 1 2 2 2 0 Thioredoxin domain Sgf11 PF08209.6 gi|21227562|ref|NP_633484.1| - 3.4 7.0 5.7 17 4.8 1.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) E1-E2_ATPase PF00122.15 gi|21227563|ref|NP_633485.1| - 1.4e-71 240.2 10.7 1.4e-71 240.2 7.4 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|21227563|ref|NP_633485.1| - 8.9e-53 178.5 5.4 8.9e-53 178.5 3.7 2.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|21227563|ref|NP_633485.1| - 7.8e-37 127.7 1.8 1.2e-36 127.1 0.0 2.3 2 2 1 3 3 3 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|21227563|ref|NP_633485.1| - 5.1e-22 77.6 0.0 9.8e-22 76.7 0.0 1.4 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Cation_ATPase_N PF00690.21 gi|21227563|ref|NP_633485.1| - 4.2e-21 74.1 0.0 9.3e-21 73.0 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.2 gi|21227563|ref|NP_633485.1| - 1e-15 58.4 0.0 2.3e-15 57.2 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227563|ref|NP_633485.1| - 0.00015 21.4 0.4 0.0037 16.8 0.4 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Tetraspannin PF00335.15 gi|21227563|ref|NP_633485.1| - 0.15 11.3 1.9 2.3 7.4 0.1 2.8 2 0 0 2 2 2 0 Tetraspanin family DUF2207 PF09972.4 gi|21227564|ref|NP_633486.1| - 0.00088 17.9 1.0 0.00088 17.9 0.7 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) UPF0104 PF03706.8 gi|21227564|ref|NP_633486.1| - 0.0031 16.8 4.6 0.0038 16.5 3.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Tetraspannin PF00335.15 gi|21227564|ref|NP_633486.1| - 0.45 9.7 6.6 1.1 8.5 1.2 2.1 2 0 0 2 2 2 0 Tetraspanin family E1-E2_ATPase PF00122.15 gi|21227565|ref|NP_633487.1| - 2.7e-50 170.5 4.2 4.6e-50 169.8 2.9 1.4 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.21 gi|21227565|ref|NP_633487.1| - 1.1e-43 150.2 1.0 1.8e-43 149.4 0.1 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|21227565|ref|NP_633487.1| - 1.4e-14 54.6 0.0 2.8e-14 53.7 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227565|ref|NP_633487.1| - 5.5e-05 22.8 0.1 0.0017 17.9 0.1 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase FlbD PF06289.6 gi|21227565|ref|NP_633487.1| - 0.072 12.4 0.1 0.32 10.3 0.0 2.1 2 0 0 2 2 2 0 Flagellar protein (FlbD) PLDc_N PF13396.1 gi|21227566|ref|NP_633488.1| - 9e-14 50.8 2.5 9e-14 50.8 1.7 1.6 2 0 0 2 2 2 1 Phospholipase_D-nuclease N-terminal HlyIII PF03006.15 gi|21227566|ref|NP_633488.1| - 0.0046 16.3 1.5 0.0055 16.1 1.0 1.1 1 0 0 1 1 1 1 Haemolysin-III related Glucos_trans_II PF14264.1 gi|21227566|ref|NP_633488.1| - 0.013 14.5 1.5 0.012 14.6 1.1 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII NnrS PF05940.7 gi|21227566|ref|NP_633488.1| - 0.017 14.0 0.2 0.017 14.0 0.2 1.0 1 0 0 1 1 1 0 NnrS protein Tmemb_9 PF05434.6 gi|21227566|ref|NP_633488.1| - 0.019 14.7 1.3 0.02 14.6 0.5 1.3 1 1 0 1 1 1 0 TMEM9 LGT PF01790.13 gi|21227566|ref|NP_633488.1| - 0.024 13.5 2.6 0.024 13.5 1.8 1.0 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase DUF4131 PF13567.1 gi|21227566|ref|NP_633488.1| - 0.03 13.7 1.4 0.033 13.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) XK-related PF09815.4 gi|21227566|ref|NP_633488.1| - 0.05 12.6 3.1 0.05 12.6 2.1 1.0 1 0 0 1 1 1 0 XK-related protein DUF4149 PF13664.1 gi|21227566|ref|NP_633488.1| - 0.069 13.2 0.5 0.079 13.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) DUF4184 PF13803.1 gi|21227566|ref|NP_633488.1| - 0.085 12.1 0.4 0.086 12.1 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) TatC PF00902.13 gi|21227566|ref|NP_633488.1| - 0.09 12.1 2.7 0.12 11.7 1.9 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF1469 PF07332.6 gi|21227566|ref|NP_633488.1| - 0.099 12.3 0.3 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF3366 PF11846.3 gi|21227566|ref|NP_633488.1| - 0.1 12.4 0.5 0.13 12.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3366) Lig_chan PF00060.21 gi|21227566|ref|NP_633488.1| - 0.39 10.4 1.6 0.77 9.4 0.1 1.9 2 0 0 2 2 2 0 Ligand-gated ion channel Tetraspannin PF00335.15 gi|21227566|ref|NP_633488.1| - 0.77 8.9 5.6 0.88 8.7 3.9 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4282 PF14110.1 gi|21227566|ref|NP_633488.1| - 0.87 9.8 7.1 1 9.5 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) EI24 PF07264.6 gi|21227566|ref|NP_633488.1| - 2 7.8 7.6 2.3 7.5 5.3 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) DUF1625 PF07787.7 gi|21227566|ref|NP_633488.1| - 2.4 7.3 4.2 2.6 7.2 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1625) CcmH PF03918.9 gi|21227566|ref|NP_633488.1| - 2.5 7.0 4.3 0.61 9.0 0.1 1.8 1 1 1 2 2 2 0 Cytochrome C biogenesis protein DUF3784 PF12650.2 gi|21227566|ref|NP_633488.1| - 4.6 7.2 8.0 15 5.6 5.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) MFS_1 PF07690.11 gi|21227566|ref|NP_633488.1| - 10 4.7 12.2 5.7 5.5 0.1 2.0 1 1 1 2 2 2 0 Major Facilitator Superfamily MFS_1 PF07690.11 gi|21227567|ref|NP_633489.1| - 1.8e-53 181.5 57.9 6.6e-45 153.3 18.7 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|21227567|ref|NP_633489.1| - 2.4e-08 32.9 1.6 2.4e-08 32.9 1.1 2.3 1 1 0 2 2 2 1 Sugar (and other) transporter MFS_2 PF13347.1 gi|21227567|ref|NP_633489.1| - 7.4e-08 31.2 16.5 6.4e-07 28.1 2.6 2.4 2 1 0 2 2 2 2 MFS/sugar transport protein Sigma70_r4_2 PF08281.7 gi|21227568|ref|NP_633490.1| - 1.1e-05 24.7 0.1 3.8e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|21227568|ref|NP_633490.1| - 7.1e-05 22.3 0.0 0.00018 21.0 0.0 1.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21227568|ref|NP_633490.1| - 0.0024 17.8 0.0 0.0056 16.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_40 PF14493.1 gi|21227568|ref|NP_633490.1| - 0.0025 17.9 0.1 0.0039 17.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.1 gi|21227568|ref|NP_633490.1| - 0.005 16.3 0.1 0.011 15.2 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.14 gi|21227568|ref|NP_633490.1| - 0.013 14.8 0.1 0.023 13.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_Tnp_IS630 PF01710.11 gi|21227568|ref|NP_633490.1| - 0.036 13.7 0.1 0.07 12.8 0.0 1.5 2 0 0 2 2 2 0 Transposase HTH_26 PF13443.1 gi|21227568|ref|NP_633490.1| - 0.054 13.6 0.1 1.3 9.2 0.0 2.3 1 1 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2197 PF09963.4 gi|21227568|ref|NP_633490.1| - 0.061 13.2 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) ADK_lid PF05191.9 gi|21227568|ref|NP_633490.1| - 0.067 12.8 0.2 0.19 11.4 0.0 1.8 2 0 0 2 2 2 0 Adenylate kinase, active site lid HTH_29 PF13551.1 gi|21227568|ref|NP_633490.1| - 0.069 13.3 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix DDE_Tnp_IS1 PF03400.8 gi|21227569|ref|NP_633491.1| - 0.00011 22.3 0.2 0.00015 21.8 0.2 1.3 1 0 0 1 1 1 1 IS1 transposase TAP42 PF04177.7 gi|21227569|ref|NP_633491.1| - 0.041 12.8 1.4 0.047 12.6 1.0 1.1 1 0 0 1 1 1 0 TAP42-like family Zn_Tnp_IS1595 PF12760.2 gi|21227570|ref|NP_633492.1| - 0.00026 20.7 0.2 0.00036 20.2 0.1 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|21227570|ref|NP_633492.1| - 0.00059 19.9 1.0 0.043 14.1 0.1 2.2 2 0 0 2 2 2 1 Zinc-finger double domain Zn-ribbon_8 PF09723.5 gi|21227570|ref|NP_633492.1| - 0.0037 17.1 1.8 0.082 12.8 1.2 2.1 1 1 0 1 1 1 1 Zinc ribbon domain HXXEE PF13787.1 gi|21227570|ref|NP_633492.1| - 0.011 16.0 2.5 0.014 15.7 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif zf-ribbon_3 PF13248.1 gi|21227570|ref|NP_633492.1| - 0.022 13.9 0.4 0.069 12.3 0.3 1.8 1 1 0 1 1 1 0 zinc-ribbon domain FdhE PF04216.7 gi|21227570|ref|NP_633492.1| - 0.025 14.3 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation TF_Zn_Ribbon PF08271.7 gi|21227570|ref|NP_633492.1| - 0.025 13.8 0.3 0.53 9.6 0.0 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_5 PF13719.1 gi|21227570|ref|NP_633492.1| - 0.026 14.1 3.2 0.3 10.7 2.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zf-FPG_IleRS PF06827.9 gi|21227570|ref|NP_633492.1| - 0.033 13.8 3.5 1.7 8.3 1.3 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zinc_ribbon_4 PF13717.1 gi|21227570|ref|NP_633492.1| - 0.04 13.6 2.8 0.2 11.3 2.0 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zf-CSL PF05207.8 gi|21227570|ref|NP_633492.1| - 0.072 12.6 0.7 0.16 11.5 0.5 1.5 1 1 0 1 1 1 0 CSL zinc finger zinc_ribbon_2 PF13240.1 gi|21227570|ref|NP_633492.1| - 0.083 12.3 1.3 1.9 8.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF1610 PF07754.6 gi|21227570|ref|NP_633492.1| - 0.1 12.7 1.2 0.1 12.7 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DUF3797 PF12677.2 gi|21227570|ref|NP_633492.1| - 0.11 12.1 0.6 2.1 8.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) A2L_zn_ribbon PF08792.5 gi|21227570|ref|NP_633492.1| - 0.14 11.6 0.7 0.41 10.1 0.0 1.9 2 0 0 2 2 2 0 A2L zinc ribbon domain 2TM PF13239.1 gi|21227570|ref|NP_633492.1| - 0.16 12.0 2.8 0.22 11.6 1.9 1.2 1 0 0 1 1 1 0 2TM domain zf-HIT PF04438.11 gi|21227570|ref|NP_633492.1| - 0.2 11.3 4.7 3.3 7.4 0.1 2.2 2 0 0 2 2 2 0 HIT zinc finger DZR PF12773.2 gi|21227570|ref|NP_633492.1| - 0.21 11.4 1.0 0.44 10.3 0.7 1.6 1 1 0 1 1 1 0 Double zinc ribbon DUF4234 PF14018.1 gi|21227570|ref|NP_633492.1| - 0.22 11.2 2.9 0.78 9.5 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4234) DUF4337 PF14235.1 gi|21227570|ref|NP_633492.1| - 0.22 11.3 0.8 0.27 11.0 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) zf-LITAF-like PF10601.4 gi|21227570|ref|NP_633492.1| - 0.44 10.4 7.4 14 5.6 4.0 2.9 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain zf-CCHC_5 PF14787.1 gi|21227570|ref|NP_633492.1| - 0.5 9.8 7.3 2.8 7.4 1.5 2.4 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger zf-C2HC_2 PF13913.1 gi|21227570|ref|NP_633492.1| - 0.65 9.7 0.0 0.65 9.7 0.0 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Cys_rich_KTR PF14205.1 gi|21227570|ref|NP_633492.1| - 0.91 9.0 6.3 9.3 5.7 0.1 2.5 2 1 0 2 2 2 0 Cysteine-rich KTR zf-TFIIB PF13453.1 gi|21227570|ref|NP_633492.1| - 1.1 8.5 3.5 15 4.9 2.6 2.2 1 1 1 2 2 2 0 Transcription factor zinc-finger Corona_S2 PF01601.11 gi|21227570|ref|NP_633492.1| - 1.1 7.2 3.2 1 7.3 2.2 1.2 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF4191 PF13829.1 gi|21227570|ref|NP_633492.1| - 1.2 8.2 3.2 1.4 8.0 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) TMEM52 PF14979.1 gi|21227570|ref|NP_633492.1| - 2 8.2 4.8 2.7 7.8 3.4 1.3 1 0 0 1 1 1 0 Transmembrane 52 FixQ PF05545.6 gi|21227570|ref|NP_633492.1| - 2.6 7.7 7.9 0.97 9.1 1.3 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ UPF0547 PF10571.4 gi|21227570|ref|NP_633492.1| - 3.2 7.5 6.8 7.1 6.4 0.2 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF454 PF04304.8 gi|21227570|ref|NP_633492.1| - 5.9 6.9 11.9 10 6.1 8.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF454) RELT PF12606.3 gi|21227570|ref|NP_633492.1| - 6.6 5.9 8.8 0.15 11.2 0.8 2.0 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 ABC_membrane PF00664.18 gi|21227570|ref|NP_633492.1| - 8.6 5.6 9.6 12 5.2 6.7 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region LCM PF04072.9 gi|21227571|ref|NP_633493.1| - 2.3e-39 134.8 0.0 3.2e-39 134.3 0.0 1.1 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase tRNA-synt_2d PF01409.15 gi|21227572|ref|NP_633494.1| - 8.2e-91 303.5 0.0 1.1e-90 303.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|21227572|ref|NP_633494.1| - 0.00067 18.5 3.6 0.066 11.9 0.0 3.5 4 1 0 4 4 4 2 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 gi|21227572|ref|NP_633494.1| - 0.0069 15.9 0.0 0.03 13.9 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) ssDNA-exonuc_C PF10141.4 gi|21227572|ref|NP_633494.1| - 0.1 12.0 0.2 0.28 10.6 0.0 1.7 2 0 0 2 2 2 0 Single-strand DNA-specific exonuclease, C terminal domain tRNA-synt_1b PF00579.20 gi|21227573|ref|NP_633495.1| - 2.5e-33 115.4 0.0 2.5e-18 66.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) NTP_transf_2 PF01909.18 gi|21227574|ref|NP_633496.1| - 0.00094 19.4 1.5 0.0013 19.0 1.1 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF86 PF01934.12 gi|21227575|ref|NP_633497.1| - 1.7e-29 101.8 0.1 2.1e-29 101.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Radical_SAM PF04055.16 gi|21227576|ref|NP_633498.1| - 2.6e-11 43.9 0.0 9.3e-11 42.1 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.1 gi|21227576|ref|NP_633498.1| - 1.7e-06 28.2 0.0 3.4e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain NAD_binding_2 PF03446.10 gi|21227576|ref|NP_633498.1| - 0.0023 17.7 0.0 0.005 16.6 0.0 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase eIF-5_eIF-2B PF01873.12 gi|21227577|ref|NP_633499.1| - 8.6e-40 135.2 0.0 1.2e-39 134.7 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.15 gi|21227577|ref|NP_633499.1| - 6e-12 45.1 0.8 1.6e-11 43.8 0.5 1.7 1 0 0 1 1 1 1 TRAM domain Zn-ribbon_8 PF09723.5 gi|21227577|ref|NP_633499.1| - 0.0082 16.0 0.6 0.018 14.9 0.4 1.6 1 0 0 1 1 1 1 Zinc ribbon domain DUF4265 PF14085.1 gi|21227577|ref|NP_633499.1| - 0.014 15.1 0.0 0.039 13.6 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4265) ZF-HD_dimer PF04770.7 gi|21227577|ref|NP_633499.1| - 0.033 14.2 0.2 0.058 13.4 0.1 1.5 1 0 0 1 1 1 0 ZF-HD protein dimerisation region NMD3 PF04981.8 gi|21227577|ref|NP_633499.1| - 0.034 13.2 0.2 0.048 12.7 0.1 1.2 1 0 0 1 1 1 0 NMD3 family zf-ribbon_3 PF13248.1 gi|21227577|ref|NP_633499.1| - 0.077 12.2 0.3 8.3 5.7 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|21227577|ref|NP_633499.1| - 0.12 11.8 0.9 9.4 5.8 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.13 gi|21227577|ref|NP_633499.1| - 0.35 9.9 0.1 0.35 9.9 0.1 1.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Ribosomal_L16 PF00252.13 gi|21227578|ref|NP_633500.1| - 5.5e-31 107.0 0.5 6.4e-31 106.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF1786 PF08735.5 gi|21227579|ref|NP_633501.1| - 5.8e-102 340.2 0.0 7.1e-102 339.9 0.0 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) DDR PF08841.5 gi|21227579|ref|NP_633501.1| - 0.0075 15.1 0.2 0.0075 15.1 0.1 1.6 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain MoCF_biosynth PF00994.19 gi|21227580|ref|NP_633502.1| - 3.4e-32 110.8 0.0 4e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain SNF2_N PF00176.18 gi|21227581|ref|NP_633503.1| - 8.2e-66 221.8 0.0 1.1e-65 221.4 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.3 gi|21227581|ref|NP_633503.1| - 1.3e-42 144.6 0.5 2.9e-42 143.4 0.4 1.7 1 0 0 1 1 1 1 SNF2 Helicase protein Helicase_C PF00271.26 gi|21227581|ref|NP_633503.1| - 4.9e-16 58.3 0.0 1.9e-15 56.4 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain MAGE PF01454.14 gi|21227581|ref|NP_633503.1| - 0.045 13.0 0.0 0.11 11.8 0.0 1.6 1 0 0 1 1 1 0 MAGE family SWIM PF04434.12 gi|21227582|ref|NP_633504.1| - 3.3e-07 29.6 0.1 6.3e-07 28.7 0.1 1.4 1 0 0 1 1 1 1 SWIM zinc finger FeoA PF04023.9 gi|21227583|ref|NP_633505.1| - 6.9e-07 29.1 0.0 6.9e-07 29.1 0.0 1.0 1 0 0 1 1 1 1 FeoA domain Gate PF07670.9 gi|21227584|ref|NP_633506.1| - 0.1 12.4 0.3 0.1 12.4 0.2 1.7 2 0 0 2 2 2 0 Nucleoside recognition Gate PF07670.9 gi|21227585|ref|NP_633507.1| - 0.011 15.6 1.1 0.013 15.4 0.8 1.1 1 0 0 1 1 1 0 Nucleoside recognition DUF1724 PF08350.5 gi|21227586|ref|NP_633508.1| - 4.6e-24 83.7 0.0 9.1e-24 82.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21227586|ref|NP_633508.1| - 3.6e-05 23.3 0.1 6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|21227586|ref|NP_633508.1| - 6.1e-05 22.6 0.1 0.00013 21.5 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|21227586|ref|NP_633508.1| - 0.0032 17.2 0.1 0.0068 16.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HemN_C PF06969.11 gi|21227586|ref|NP_633508.1| - 0.0053 16.7 0.7 1.2 9.2 0.0 2.7 2 0 0 2 2 2 2 HemN C-terminal domain HTH_11 PF08279.7 gi|21227586|ref|NP_633508.1| - 0.047 13.3 0.1 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 HTH domain CRS1_YhbY PF01985.16 gi|21227587|ref|NP_633509.1| - 1.4e-25 89.0 2.0 1.6e-25 88.9 1.4 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain CCDC155 PF14662.1 gi|21227587|ref|NP_633509.1| - 0.043 13.4 0.2 0.046 13.3 0.2 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 tRNA-synt_2c PF01411.14 gi|21227588|ref|NP_633510.1| - 8.2e-130 433.6 0.0 1e-129 433.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|21227588|ref|NP_633510.1| - 4.9e-14 51.9 2.2 1.4e-13 50.4 1.5 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|21227588|ref|NP_633510.1| - 2.7e-09 36.5 1.9 8.1e-09 35.0 1.3 1.8 1 0 0 1 1 1 1 DHHA1 domain Methyltransf_15 PF09445.5 gi|21227589|ref|NP_633511.1| - 6.1e-13 48.6 0.0 1.1e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.1 gi|21227589|ref|NP_633511.1| - 5.3e-11 42.3 0.0 9.5e-11 41.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21227589|ref|NP_633511.1| - 3.7e-09 36.6 0.0 5.5e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227589|ref|NP_633511.1| - 1e-08 35.7 0.0 2.1e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|21227589|ref|NP_633511.1| - 3e-07 29.7 0.0 5.5e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.7 gi|21227589|ref|NP_633511.1| - 1.4e-05 25.4 0.0 2.9e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227589|ref|NP_633511.1| - 2.7e-05 24.4 0.0 5e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21227589|ref|NP_633511.1| - 4.5e-05 22.8 0.0 7.1e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain tRNA_U5-meth_tr PF05958.6 gi|21227589|ref|NP_633511.1| - 0.00024 19.9 0.0 0.00038 19.2 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.11 gi|21227589|ref|NP_633511.1| - 0.00038 20.1 0.0 0.00061 19.4 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein UPF0020 PF01170.13 gi|21227589|ref|NP_633511.1| - 0.0023 17.5 0.0 0.0042 16.6 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 RrnaAD PF00398.15 gi|21227589|ref|NP_633511.1| - 0.0039 16.2 0.0 0.0062 15.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.10 gi|21227589|ref|NP_633511.1| - 0.018 14.4 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 PCMT PF01135.14 gi|21227589|ref|NP_633511.1| - 0.057 12.9 0.0 0.098 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.14 gi|21227589|ref|NP_633511.1| - 0.061 13.3 0.0 0.24 11.3 0.0 1.9 2 0 0 2 2 2 0 FtsJ-like methyltransferase Methyltransf_30 PF05430.6 gi|21227589|ref|NP_633511.1| - 0.12 12.0 0.0 0.76 9.4 0.0 2.0 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase Acetyltransf_1 PF00583.19 gi|21227590|ref|NP_633512.1| - 2.3e-18 65.9 0.1 1.4e-17 63.5 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21227590|ref|NP_633512.1| - 1.7e-12 47.3 0.0 7.6e-11 42.0 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21227590|ref|NP_633512.1| - 2e-10 40.8 0.0 1.4e-09 38.1 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21227590|ref|NP_633512.1| - 1.5e-08 34.8 0.2 1.2e-07 31.9 0.0 2.3 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227590|ref|NP_633512.1| - 1.4e-07 31.3 0.2 1.3e-06 28.2 0.0 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21227590|ref|NP_633512.1| - 3.1e-07 30.0 0.0 1.3e-06 28.0 0.0 1.9 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_4 PF13420.1 gi|21227590|ref|NP_633512.1| - 9.1e-05 22.4 0.1 0.00023 21.1 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21227590|ref|NP_633512.1| - 0.00077 19.2 0.1 0.0016 18.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_8 PF13523.1 gi|21227590|ref|NP_633512.1| - 0.0021 17.9 0.0 0.0037 17.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Iso_dh PF00180.15 gi|21227591|ref|NP_633513.1| - 2.6e-93 312.7 0.0 2.9e-93 312.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aconitase_C PF00694.14 gi|21227592|ref|NP_633514.1| - 6.3e-19 68.3 0.0 8e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|21227592|ref|NP_633514.1| - 0.0046 16.4 0.2 0.06 12.7 0.2 2.0 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus AAA_10 PF12846.2 gi|21227593|ref|NP_633515.1| - 8.5e-14 51.6 0.0 2.4e-11 43.6 0.0 2.2 1 1 0 2 2 2 2 AAA-like domain DUF87 PF01935.12 gi|21227593|ref|NP_633515.1| - 5.3e-09 36.2 0.0 9.9e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF87 FtsK_SpoIIIE PF01580.13 gi|21227593|ref|NP_633515.1| - 4.6e-08 32.7 0.0 0.0038 16.7 0.0 2.2 2 0 0 2 2 2 2 FtsK/SpoIIIE family Zot PF05707.7 gi|21227593|ref|NP_633515.1| - 0.0042 16.5 0.1 0.01 15.2 0.0 1.6 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) DUF853 PF05872.7 gi|21227593|ref|NP_633515.1| - 0.0074 14.6 0.0 0.019 13.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA PF00004.24 gi|21227593|ref|NP_633515.1| - 0.029 14.5 0.0 0.66 10.1 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|21227593|ref|NP_633515.1| - 0.055 13.6 0.0 4.4 7.4 0.0 2.6 3 0 0 3 3 3 0 AAA domain Imm15 PF15590.1 gi|21227593|ref|NP_633515.1| - 0.056 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 15 TrwB_AAD_bind PF10412.4 gi|21227593|ref|NP_633515.1| - 0.19 10.3 0.0 8.2 4.9 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF1724 PF08350.5 gi|21227594|ref|NP_633516.1| - 2e-24 84.9 0.5 4.7e-24 83.6 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21227594|ref|NP_633516.1| - 6.6e-07 28.9 0.1 1.2e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|21227594|ref|NP_633516.1| - 0.0019 18.4 0.0 0.0039 17.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|21227594|ref|NP_633516.1| - 0.0072 16.1 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|21227594|ref|NP_633516.1| - 0.0095 15.6 0.1 0.023 14.4 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|21227594|ref|NP_633516.1| - 0.031 13.9 0.1 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 MarR family DUF1495 PF07381.6 gi|21227594|ref|NP_633516.1| - 0.044 13.4 0.1 0.79 9.4 0.1 2.5 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_24 PF13412.1 gi|21227594|ref|NP_633516.1| - 0.08 12.3 0.1 0.23 10.8 0.1 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Phage_rep_org_N PF09681.5 gi|21227594|ref|NP_633516.1| - 0.094 12.2 0.4 0.69 9.4 0.1 2.3 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) DUF1297 PF06973.7 gi|21227595|ref|NP_633517.1| - 7.1e-67 224.3 0.1 9.8e-67 223.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|21227595|ref|NP_633517.1| - 9.1e-46 154.6 0.0 1.7e-45 153.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) ATP-grasp_4 PF13535.1 gi|21227595|ref|NP_633517.1| - 1.4e-05 24.9 0.1 0.006 16.3 0.0 2.5 1 1 0 2 2 2 2 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|21227595|ref|NP_633517.1| - 0.0003 20.6 0.0 0.0011 18.9 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|21227595|ref|NP_633517.1| - 0.003 16.8 0.0 0.0055 16.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.14 gi|21227595|ref|NP_633517.1| - 0.11 12.0 0.0 16 5.0 0.0 2.3 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HTH_20 PF12840.2 gi|21227596|ref|NP_633518.1| - 1.7e-10 40.5 0.0 2.9e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21227596|ref|NP_633518.1| - 5.6e-07 28.8 0.5 5.6e-07 28.8 0.4 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF742 PF05331.6 gi|21227596|ref|NP_633518.1| - 2.4e-05 23.8 0.0 4.6e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF742) TrmB PF01978.14 gi|21227596|ref|NP_633518.1| - 3.6e-05 23.3 0.3 9.4e-05 22.0 0.2 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|21227596|ref|NP_633518.1| - 0.0003 20.3 0.2 0.00055 19.5 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.12 gi|21227596|ref|NP_633518.1| - 0.011 15.1 0.6 0.022 14.2 0.4 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit DUF2250 PF10007.4 gi|21227596|ref|NP_633518.1| - 0.032 14.1 0.5 0.059 13.2 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.5 gi|21227596|ref|NP_633518.1| - 0.033 13.7 0.0 0.064 12.8 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_45 PF14947.1 gi|21227596|ref|NP_633518.1| - 0.035 13.9 0.8 0.072 12.9 0.5 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_27 PF13463.1 gi|21227596|ref|NP_633518.1| - 0.066 13.5 0.1 0.14 12.5 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21227596|ref|NP_633518.1| - 0.066 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 MarR family PseudoU_synth_1 PF01416.15 gi|21227597|ref|NP_633519.1| - 5.7e-38 129.5 0.0 2.1e-22 79.5 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase UPF0020 PF01170.13 gi|21227598|ref|NP_633520.1| - 3.3e-34 118.0 0.0 4.7e-34 117.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.12 gi|21227598|ref|NP_633520.1| - 2e-15 56.9 1.3 4.8e-15 55.7 0.9 1.5 2 0 0 2 2 2 1 THUMP domain Methyltransf_26 PF13659.1 gi|21227598|ref|NP_633520.1| - 3.5e-14 52.8 0.0 5.9e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227598|ref|NP_633520.1| - 2.6e-09 37.4 0.0 1e-08 35.5 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|21227598|ref|NP_633520.1| - 1.6e-08 34.3 0.0 0.0015 18.0 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_31 PF13847.1 gi|21227598|ref|NP_633520.1| - 5e-08 32.6 0.0 8.6e-08 31.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|21227598|ref|NP_633520.1| - 0.00014 21.3 0.0 0.00023 20.5 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|21227598|ref|NP_633520.1| - 0.00039 20.0 0.0 0.00072 19.1 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.13 gi|21227598|ref|NP_633520.1| - 0.0028 16.8 0.0 0.0067 15.5 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|21227598|ref|NP_633520.1| - 0.0028 18.2 0.0 0.0083 16.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain N6_Mtase PF02384.11 gi|21227598|ref|NP_633520.1| - 0.0083 15.2 0.0 0.016 14.2 0.0 1.4 1 0 0 1 1 1 1 N-6 DNA Methylase MTS PF05175.9 gi|21227598|ref|NP_633520.1| - 0.019 14.3 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Mtf2_C PF14061.1 gi|21227598|ref|NP_633520.1| - 0.027 14.3 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Methyltransf_23 PF13489.1 gi|21227598|ref|NP_633520.1| - 0.08 12.6 0.0 0.37 10.4 0.0 2.1 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_8 PF05148.10 gi|21227598|ref|NP_633520.1| - 0.13 11.8 0.0 0.32 10.5 0.0 1.7 2 0 0 2 2 2 0 Hypothetical methyltransferase Methyltransf_25 PF13649.1 gi|21227598|ref|NP_633520.1| - 0.14 12.5 0.0 0.31 11.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain DUF1805 PF08827.6 gi|21227599|ref|NP_633521.1| - 7.3e-27 92.9 2.0 9.3e-27 92.6 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) Peptidase_M24 PF00557.19 gi|21227601|ref|NP_633523.1| - 8.9e-48 162.6 0.0 1e-47 162.4 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24 PF00557.19 gi|21227602|ref|NP_633524.1| - 2.3e-41 141.6 0.8 3.4e-41 141.0 0.5 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2452 PF10504.4 gi|21227602|ref|NP_633524.1| - 0.045 13.0 0.0 0.088 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) Mob_Pre PF01076.14 gi|21227603|ref|NP_633525.1| - 0.07 12.7 0.2 0.61 9.7 0.0 2.0 2 0 0 2 2 2 0 Plasmid recombination enzyme AdoMet_Synthase PF01941.14 gi|21227604|ref|NP_633526.1| - 4e-184 611.6 0.7 4.5e-184 611.5 0.5 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.13 gi|21227605|ref|NP_633527.1| - 4.8e-51 172.5 0.3 7.1e-51 172.0 0.2 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|21227605|ref|NP_633527.1| - 1.5e-26 92.0 0.3 2.9e-26 91.1 0.2 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.6 gi|21227605|ref|NP_633527.1| - 8e-07 28.8 0.1 0.00011 21.9 0.0 2.5 1 1 2 3 3 3 1 NMT1/THI5 like SBP_bac_3 PF00497.15 gi|21227605|ref|NP_633527.1| - 0.00014 21.2 0.0 0.00026 20.3 0.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF4265 PF14085.1 gi|21227605|ref|NP_633527.1| - 0.056 13.1 0.1 0.9 9.3 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4265) Phosphonate-bd PF12974.2 gi|21227605|ref|NP_633527.1| - 0.063 12.6 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF111 PF01969.12 gi|21227605|ref|NP_633527.1| - 0.068 11.9 0.5 9.2 4.9 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function DUF111 His_biosynth PF00977.16 gi|21227606|ref|NP_633528.1| - 8.5e-79 264.0 0.5 9.5e-79 263.8 0.3 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.12 gi|21227606|ref|NP_633528.1| - 4.1e-10 38.9 0.1 0.00013 20.9 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|21227606|ref|NP_633528.1| - 1.1e-08 34.6 0.9 0.00012 21.4 0.0 2.1 2 0 0 2 2 2 2 PcrB family DHO_dh PF01180.16 gi|21227606|ref|NP_633528.1| - 3.9e-08 32.5 0.3 0.00023 20.2 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.10 gi|21227606|ref|NP_633528.1| - 6.3e-08 32.1 0.2 6.6e-07 28.7 0.0 2.0 2 0 0 2 2 2 1 Nitronate monooxygenase NanE PF04131.9 gi|21227606|ref|NP_633528.1| - 2.4e-07 29.9 0.2 0.017 14.0 0.1 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.16 gi|21227606|ref|NP_633528.1| - 5.2e-06 25.6 0.2 0.00062 18.9 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase TMP-TENI PF02581.12 gi|21227606|ref|NP_633528.1| - 6e-06 25.4 1.6 4.5e-05 22.6 0.1 2.3 2 1 0 2 2 2 1 Thiamine monophosphate synthase/TENI ThiG PF05690.9 gi|21227606|ref|NP_633528.1| - 1.4e-05 24.3 0.7 0.036 13.1 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.15 gi|21227606|ref|NP_633528.1| - 3.9e-05 22.3 0.9 0.0038 15.7 0.1 2.1 2 0 0 2 2 2 2 Tryptophan synthase alpha chain IMPDH PF00478.20 gi|21227606|ref|NP_633528.1| - 0.00039 19.4 0.3 0.17 10.7 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.13 gi|21227606|ref|NP_633528.1| - 0.0013 17.6 0.6 0.094 11.5 0.0 2.1 2 0 0 2 2 2 1 FMN-dependent dehydrogenase G3P_antiterm PF04309.7 gi|21227606|ref|NP_633528.1| - 0.0048 15.9 1.0 0.026 13.5 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Ribul_P_3_epim PF00834.14 gi|21227606|ref|NP_633528.1| - 0.013 14.5 0.2 2.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family DUF561 PF04481.7 gi|21227606|ref|NP_633528.1| - 0.021 13.7 0.2 0.038 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) IGPD PF00475.13 gi|21227607|ref|NP_633529.1| - 1e-63 213.5 2.2 1.3e-63 213.1 1.5 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase FdhD-NarQ PF02634.10 gi|21227608|ref|NP_633530.1| - 1.2e-55 188.5 0.0 2e-55 187.8 0.0 1.3 1 1 0 1 1 1 1 FdhD/NarQ family RE_Eco47II PF09553.5 gi|21227608|ref|NP_633530.1| - 0.053 12.6 0.0 0.072 12.1 0.0 1.2 1 0 0 1 1 1 0 Eco47II restriction endonuclease DUF1628 PF07790.6 gi|21227610|ref|NP_633532.1| - 1.8 9.4 8.5 3.1 8.6 4.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|21227611|ref|NP_633533.1| - 5.4e-21 75.1 0.3 1.6e-20 73.6 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) PKD_channel PF08016.7 gi|21227611|ref|NP_633533.1| - 0.066 11.6 0.1 0.15 10.4 0.1 1.5 2 0 0 2 2 2 0 Polycystin cation channel DUF1628 PF07790.6 gi|21227612|ref|NP_633534.1| - 1.8e-21 76.6 1.6 3.7e-21 75.6 1.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) Arch_flagellin PF01917.11 gi|21227612|ref|NP_633534.1| - 0.019 14.5 0.1 0.019 14.5 0.1 1.6 2 0 0 2 2 2 0 Archaebacterial flagellin LTD PF00932.14 gi|21227612|ref|NP_633534.1| - 0.13 12.3 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Lamin Tail Domain DUF1628 PF07790.6 gi|21227613|ref|NP_633535.1| - 4.4e-25 88.2 1.0 4.4e-25 88.2 0.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|21227615|ref|NP_633537.1| - 1.8e-21 76.7 0.5 2.5e-21 76.1 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|21227616|ref|NP_633538.1| - 1.3e-19 70.7 2.3 2.8e-19 69.6 0.8 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) T2SF PF00482.18 gi|21227617|ref|NP_633539.1| - 3.4e-34 117.4 4.6 4e-21 75.2 1.4 4.1 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F T2SE PF00437.15 gi|21227618|ref|NP_633540.1| - 4e-45 153.8 0.0 6.5e-45 153.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|21227618|ref|NP_633540.1| - 0.0062 16.0 0.1 0.016 14.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Aminotran_5 PF00266.14 gi|21227619|ref|NP_633541.1| - 1.6e-131 438.4 0.0 1.8e-131 438.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|21227619|ref|NP_633541.1| - 3e-11 42.9 0.0 4e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.16 gi|21227619|ref|NP_633541.1| - 1.5e-07 30.7 0.1 5.4e-06 25.5 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|21227619|ref|NP_633541.1| - 9.7e-07 27.3 0.0 1.6e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|21227619|ref|NP_633541.1| - 1.7e-06 27.4 0.0 2.8e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase SHMT PF00464.14 gi|21227619|ref|NP_633541.1| - 0.0054 15.1 0.0 0.0083 14.5 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase OKR_DC_1 PF01276.15 gi|21227619|ref|NP_633541.1| - 0.075 11.5 0.1 0.3 9.5 0.0 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain DUF531 PF04407.7 gi|21227620|ref|NP_633542.1| - 1.9e-85 285.0 0.1 2.3e-85 284.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF531) Acetyltransf_1 PF00583.19 gi|21227621|ref|NP_633543.1| - 2.3e-12 46.7 0.0 3.8e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21227621|ref|NP_633543.1| - 9.8e-11 41.6 0.0 1.4e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21227621|ref|NP_633543.1| - 6e-07 29.6 0.0 7.4e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227621|ref|NP_633543.1| - 1.1e-05 25.2 0.0 3e-05 23.8 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21227621|ref|NP_633543.1| - 2.4e-05 24.1 0.0 3.8e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.5 gi|21227621|ref|NP_633543.1| - 7.4e-05 22.4 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|21227621|ref|NP_633543.1| - 0.0051 16.6 0.0 0.0091 15.8 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21227621|ref|NP_633543.1| - 0.021 14.7 0.0 0.54 10.2 0.0 2.1 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.1 gi|21227621|ref|NP_633543.1| - 0.024 13.9 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Asn_synthase PF00733.16 gi|21227622|ref|NP_633544.1| - 4.5e-08 32.8 0.3 3.5e-07 29.9 0.0 2.3 2 1 1 3 3 3 1 Asparagine synthase NAD_synthase PF02540.12 gi|21227622|ref|NP_633544.1| - 1.4e-06 27.3 0.0 2.2e-06 26.7 0.0 1.4 1 1 0 1 1 1 1 NAD synthase QueC PF06508.8 gi|21227622|ref|NP_633544.1| - 3.7e-06 26.3 0.0 8.4e-05 21.9 0.0 2.7 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 gi|21227622|ref|NP_633544.1| - 0.00064 19.2 0.0 0.0062 16.0 0.0 2.2 1 1 0 1 1 1 1 PP-loop family ThiI PF02568.9 gi|21227622|ref|NP_633544.1| - 0.0021 17.5 0.0 0.0058 16.1 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.11 gi|21227622|ref|NP_633544.1| - 0.017 13.7 0.0 0.95 7.9 0.0 2.3 2 0 0 2 2 2 0 tRNA methyl transferase PAPS_reduct PF01507.14 gi|21227622|ref|NP_633544.1| - 0.026 14.3 0.0 0.43 10.3 0.0 2.2 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family PGM_PMM_I PF02878.11 gi|21227623|ref|NP_633545.1| - 6.6e-42 142.2 0.1 1.7e-41 140.9 0.1 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|21227623|ref|NP_633545.1| - 1e-26 93.2 0.0 1.9e-26 92.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|21227623|ref|NP_633545.1| - 3.5e-25 88.2 0.1 6.4e-25 87.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|21227623|ref|NP_633545.1| - 6e-12 45.3 0.1 2.2e-11 43.5 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Methyltransf_18 PF12847.2 gi|21227623|ref|NP_633545.1| - 0.1 13.2 0.0 0.32 11.5 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227623|ref|NP_633545.1| - 0.11 12.2 0.0 0.5 10.0 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Radical_SAM PF04055.16 gi|21227624|ref|NP_633546.1| - 2.2e-26 92.9 0.2 1.9e-25 89.9 0.1 2.1 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|21227624|ref|NP_633546.1| - 8.4e-11 41.7 0.0 5.2e-10 39.2 0.0 2.2 2 0 0 2 2 2 1 B12 binding domain Peptidase_M50 PF02163.17 gi|21227625|ref|NP_633547.1| - 9.8e-16 57.2 11.9 3.7e-15 55.3 5.5 2.7 2 1 0 2 2 2 1 Peptidase family M50 2TM PF13239.1 gi|21227625|ref|NP_633547.1| - 3.6 7.7 7.8 0.27 11.3 1.2 2.3 2 0 0 2 2 2 0 2TM domain DUF126 PF01989.11 gi|21227626|ref|NP_633548.1| - 1.4e-36 124.0 0.3 1.9e-36 123.5 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 DUF521 PF04412.8 gi|21227627|ref|NP_633549.1| - 3.8e-153 509.7 0.2 4.3e-153 509.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) UbiD PF01977.11 gi|21227628|ref|NP_633550.1| - 2.7e-128 427.9 0.9 3.1e-128 427.7 0.6 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Citrate_synt PF00285.16 gi|21227629|ref|NP_633551.1| - 5.4e-121 403.6 0.0 6e-121 403.5 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase Aconitase PF00330.15 gi|161485674|ref|NP_633552.2| - 3.9e-142 473.9 0.0 2.8e-100 335.9 0.0 2.1 2 0 0 2 2 2 2 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|161485674|ref|NP_633552.2| - 7.2e-39 132.8 0.0 1.8e-38 131.6 0.0 1.7 1 0 0 1 1 1 1 Aconitase C-terminal domain HDC PF02329.11 gi|21227631|ref|NP_633553.1| - 0.0089 14.7 0.0 0.2 10.2 0.0 2.6 2 1 1 3 3 3 1 Histidine carboxylase PI chain DUF496 PF04363.7 gi|21227631|ref|NP_633553.1| - 0.015 15.0 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF496) DNA_ligase_A_N PF04675.9 gi|21227631|ref|NP_633553.1| - 0.033 14.0 0.7 0.18 11.6 0.1 2.1 2 0 0 2 2 2 0 DNA ligase N terminus VWA_2 PF13519.1 gi|21227632|ref|NP_633554.1| - 3.9e-10 40.1 0.0 6.4e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|21227632|ref|NP_633554.1| - 8.5e-10 38.1 0.0 1.4e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.1 gi|21227632|ref|NP_633554.1| - 8e-08 32.1 0.0 2e-07 30.8 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|21227632|ref|NP_633554.1| - 2e-07 30.8 0.0 4.4e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.4 gi|21227632|ref|NP_633554.1| - 0.00017 21.5 0.0 0.00039 20.4 0.0 1.6 1 0 0 1 1 1 1 VWA-like domain (DUF2201) CobT_C PF11775.3 gi|21227632|ref|NP_633554.1| - 0.025 14.0 0.1 0.24 10.7 0.0 2.3 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain RP-C_C PF11800.3 gi|21227632|ref|NP_633554.1| - 0.56 9.8 4.5 0.98 9.0 3.1 1.3 1 0 0 1 1 1 0 Replication protein C C-terminal region AAA_5 PF07728.9 gi|21227633|ref|NP_633555.1| - 8.7e-28 96.7 0.0 1.6e-27 95.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.24 gi|21227633|ref|NP_633555.1| - 7.7e-07 29.3 0.0 2.5e-06 27.6 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.6 gi|21227633|ref|NP_633555.1| - 7.8e-07 28.7 0.0 1.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|21227633|ref|NP_633555.1| - 0.0002 21.4 0.0 0.0017 18.3 0.0 2.2 1 1 0 2 2 2 1 AAA ATPase domain KaiC PF06745.8 gi|21227633|ref|NP_633555.1| - 0.0003 19.9 0.8 0.38 9.8 0.1 2.7 2 1 0 2 2 2 2 KaiC RuvB_N PF05496.7 gi|21227633|ref|NP_633555.1| - 0.0042 16.1 0.1 0.19 10.7 0.1 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus Mg_chelatase PF01078.16 gi|21227633|ref|NP_633555.1| - 0.0063 15.6 0.1 0.021 13.9 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|21227633|ref|NP_633555.1| - 0.017 14.5 0.0 0.047 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|21227633|ref|NP_633555.1| - 0.018 15.8 3.2 1.9 9.3 0.0 2.9 2 1 1 3 3 3 0 AAA domain SpvB PF03534.8 gi|21227633|ref|NP_633555.1| - 0.024 13.6 0.1 0.048 12.6 0.1 1.4 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein Sigma54_activat PF00158.21 gi|21227633|ref|NP_633555.1| - 0.025 14.0 0.0 0.24 10.8 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain PRP1_N PF06424.7 gi|21227633|ref|NP_633555.1| - 0.04 14.2 2.1 0.19 12.0 0.0 2.2 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal AAA_19 PF13245.1 gi|21227633|ref|NP_633555.1| - 0.075 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Part of AAA domain UPF0270 PF06794.7 gi|21227633|ref|NP_633555.1| - 0.093 12.4 0.6 18 5.2 0.0 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0270) AAA_22 PF13401.1 gi|21227633|ref|NP_633555.1| - 0.11 12.6 0.1 1.6 8.8 0.1 2.9 2 1 0 2 2 2 0 AAA domain DUF2909 PF11137.3 gi|21227634|ref|NP_633556.1| - 2.1 8.1 4.9 0.43 10.3 0.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2909) ThiF PF00899.16 gi|21227635|ref|NP_633557.1| - 5e-44 149.4 0.1 9.1e-44 148.5 0.0 1.4 1 1 1 2 2 2 1 ThiF family MoeZ_MoeB PF05237.8 gi|21227635|ref|NP_633557.1| - 7e-23 80.0 0.0 1.4e-22 79.0 0.0 1.6 1 0 0 1 1 1 1 MoeZ/MoeB domain Shikimate_DH PF01488.15 gi|21227635|ref|NP_633557.1| - 0.056 13.5 0.4 0.15 12.1 0.3 1.8 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF2007 PF09413.5 gi|21227635|ref|NP_633557.1| - 0.13 12.1 0.1 0.32 10.8 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF2007) Aldolase_II PF00596.16 gi|21227637|ref|NP_633559.1| - 2.4e-35 121.7 0.1 2.7e-35 121.6 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CDP-OH_P_transf PF01066.16 gi|21227638|ref|NP_633560.1| - 3.8e-15 56.0 12.1 2e-14 53.7 7.7 2.3 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase TMEM238 PF15125.1 gi|21227638|ref|NP_633560.1| - 4.2 7.3 9.2 0.1 12.4 0.9 2.4 3 0 0 3 3 3 0 TMEM238 protein family Archease PF01951.11 gi|21227639|ref|NP_633561.1| - 3.1e-47 159.9 0.8 3.5e-47 159.8 0.6 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) UPF0150 PF03681.10 gi|21227639|ref|NP_633561.1| - 0.14 11.7 0.9 0.36 10.5 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0150) RtcB PF01139.12 gi|21227640|ref|NP_633562.1| - 3.6e-155 517.1 0.1 4.1e-155 516.9 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB MtrH PF02007.13 gi|21227642|ref|NP_633564.1| - 4.4e-147 488.7 0.5 5e-147 488.6 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.8 gi|21227643|ref|NP_633565.1| - 5.3e-36 122.1 0.5 5.9e-36 121.9 0.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G TIM PF00121.13 gi|21227643|ref|NP_633565.1| - 0.002 17.2 0.0 0.0026 16.8 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase MtrF PF09472.5 gi|21227644|ref|NP_633566.1| - 3.7e-29 99.7 1.5 4.1e-29 99.6 1.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrA PF04208.9 gi|21227645|ref|NP_633567.1| - 4.8e-84 280.1 0.7 6.2e-84 279.7 0.5 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.5 gi|21227645|ref|NP_633567.1| - 0.074 12.2 0.7 0.18 11.0 0.5 1.7 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.7 gi|21227646|ref|NP_633568.1| - 7.1e-47 157.4 0.0 8.1e-47 157.2 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.8 gi|21227647|ref|NP_633569.1| - 1e-112 375.5 30.9 1.2e-112 375.3 21.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C MtrD PF04207.7 gi|21227648|ref|NP_633570.1| - 9.4e-112 371.8 29.4 1.1e-111 371.5 20.4 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.7 gi|21227649|ref|NP_633571.1| - 1.6e-134 447.0 12.1 1.9e-134 446.8 8.4 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E DUF1673 PF07895.6 gi|21227649|ref|NP_633571.1| - 0.0018 17.8 0.6 0.8 9.2 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1673) SpecificRecomb PF10136.4 gi|21227649|ref|NP_633571.1| - 0.093 10.7 0.3 0.13 10.2 0.2 1.2 1 0 0 1 1 1 0 Site-specific recombinase AP_endonuc_2 PF01261.19 gi|21227650|ref|NP_633572.1| - 2.1e-27 95.8 0.0 2.4e-27 95.6 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel SSF PF00474.12 gi|21227651|ref|NP_633573.1| - 4.9e-36 124.2 30.8 1.2e-35 122.9 21.0 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family DUF2613 PF11021.3 gi|21227651|ref|NP_633573.1| - 0.049 13.3 0.0 0.049 13.3 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF2613) TOBE PF03459.12 gi|21227652|ref|NP_633574.1| - 4.6e-15 55.4 0.2 7.5e-15 54.7 0.1 1.4 1 0 0 1 1 1 1 TOBE domain HTH_1 PF00126.22 gi|21227652|ref|NP_633574.1| - 6e-07 29.1 0.0 9.9e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TOBE_2 PF08402.5 gi|21227652|ref|NP_633574.1| - 0.048 13.6 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 TOBE domain ENT PF03735.9 gi|21227652|ref|NP_633574.1| - 0.063 13.0 0.0 0.22 11.2 0.0 1.9 2 0 0 2 2 2 0 ENT domain LZ_Tnp_IS481 PF13011.1 gi|21227652|ref|NP_633574.1| - 0.12 12.7 0.0 0.93 9.8 0.0 2.1 2 0 0 2 2 2 0 leucine-zipper of insertion element IS481 NPCBM_assoc PF10633.4 gi|21227653|ref|NP_633575.1| - 7.2e-10 38.7 0.4 0.0018 18.2 0.1 3.3 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|21227653|ref|NP_633575.1| - 0.0011 18.9 0.5 0.11 12.5 0.0 3.1 2 1 1 3 3 3 1 CARDB NPCBM_assoc PF10633.4 gi|21227654|ref|NP_633576.1| - 0.00038 20.4 0.1 0.11 12.4 0.0 3.1 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF1616 PF07760.6 gi|21227654|ref|NP_633576.1| - 2.5 7.1 7.1 1.2 8.1 0.0 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF1616) MMPL PF03176.10 gi|21227655|ref|NP_633577.1| - 2.3e-55 187.6 15.1 2.5e-27 95.5 0.1 2.1 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.3 gi|21227655|ref|NP_633577.1| - 1.9e-18 66.3 7.8 1e-09 38.0 0.5 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.13 gi|21227655|ref|NP_633577.1| - 8.8e-12 43.7 20.9 1.5e-05 23.1 0.4 3.1 3 0 0 3 3 3 3 Patched family SecD_SecF PF02355.11 gi|21227655|ref|NP_633577.1| - 5.5e-10 38.7 7.8 5.5e-10 38.7 5.4 2.5 2 0 0 2 2 2 1 Protein export membrane protein ACR_tran PF00873.14 gi|21227655|ref|NP_633577.1| - 1.4e-08 32.6 25.9 1.7e-05 22.4 6.2 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family QCR10 PF09796.4 gi|21227655|ref|NP_633577.1| - 0.034 13.8 0.1 0.12 12.0 0.0 1.9 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) TrmB PF01978.14 gi|21227656|ref|NP_633578.1| - 2.6e-24 84.7 0.4 4.3e-24 84.0 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.3 gi|21227656|ref|NP_633578.1| - 0.00011 21.2 0.0 0.00017 20.6 0.0 1.3 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_27 PF13463.1 gi|21227656|ref|NP_633578.1| - 0.0026 18.0 0.0 0.0059 16.9 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|21227656|ref|NP_633578.1| - 0.0032 16.9 0.1 0.006 16.1 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.16 gi|21227656|ref|NP_633578.1| - 0.0058 16.0 0.0 0.019 14.3 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_34 PF13601.1 gi|21227656|ref|NP_633578.1| - 0.0059 16.6 0.0 0.018 15.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain Helicase_C_2 PF13307.1 gi|21227656|ref|NP_633578.1| - 0.0094 15.9 0.1 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain HTH_20 PF12840.2 gi|21227656|ref|NP_633578.1| - 0.023 14.4 0.1 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|21227656|ref|NP_633578.1| - 0.025 14.6 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Lactamase_B_3 PF13483.1 gi|21227657|ref|NP_633579.1| - 4.2e-37 127.3 0.0 5.1e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|21227657|ref|NP_633579.1| - 2.3e-18 66.4 0.1 4.6e-18 65.4 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21227657|ref|NP_633579.1| - 0.00045 19.9 0.5 0.15 11.7 0.1 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Rpr2 PF04032.11 gi|21227658|ref|NP_633580.1| - 2.7e-21 75.2 0.3 3.6e-21 74.8 0.2 1.2 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF164 PF02591.10 gi|21227658|ref|NP_633580.1| - 0.018 14.8 0.4 0.038 13.8 0.3 1.5 1 0 0 1 1 1 0 Putative zinc ribbon domain DZR PF12773.2 gi|21227658|ref|NP_633580.1| - 0.02 14.7 0.4 0.043 13.6 0.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-FCS PF06467.9 gi|21227658|ref|NP_633580.1| - 0.033 13.8 1.8 0.26 10.9 0.1 2.2 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Zn_Tnp_IS1595 PF12760.2 gi|21227658|ref|NP_633580.1| - 0.12 12.2 0.5 2.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain CpXC PF14353.1 gi|21227658|ref|NP_633580.1| - 0.15 12.0 1.7 0.44 10.5 0.7 2.0 1 1 2 3 3 3 0 CpXC protein zf-BED PF02892.10 gi|21227658|ref|NP_633580.1| - 0.3 10.8 2.2 2.1 8.1 0.2 2.5 3 0 0 3 3 3 0 BED zinc finger zinc_ribbon_6 PF14599.1 gi|21227658|ref|NP_633580.1| - 0.35 10.7 2.6 6.2 6.6 0.0 2.7 2 1 1 3 3 3 0 Zinc-ribbon SRP19 PF01922.12 gi|21227659|ref|NP_633581.1| - 1.6e-27 95.8 0.2 1.9e-27 95.6 0.1 1.0 1 0 0 1 1 1 1 SRP19 protein DUF1628 PF07790.6 gi|21227662|ref|NP_633584.1| - 1.1e-11 45.3 0.2 5.4e-11 43.0 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Arch_flagellin PF01917.11 gi|21227662|ref|NP_633584.1| - 2.3 7.8 5.5 0.7 9.4 0.7 2.1 2 1 0 2 2 2 0 Archaebacterial flagellin PBP_like_2 PF12849.2 gi|21227663|ref|NP_633585.1| - 5.9e-26 91.5 1.0 7.4e-26 91.2 0.7 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|21227663|ref|NP_633585.1| - 1.4e-14 54.3 0.0 1.9e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|21227663|ref|NP_633585.1| - 0.00052 19.8 0.1 0.7 9.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein DUF3994 PF13159.1 gi|21227663|ref|NP_633585.1| - 5.9 7.1 6.7 14 6.0 0.0 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF3994) BPD_transp_1 PF00528.17 gi|21227664|ref|NP_633586.1| - 1.7e-14 53.7 22.8 2.2e-14 53.3 15.8 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|21227665|ref|NP_633587.1| - 3.3e-33 114.8 0.0 7.6e-33 113.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.12 gi|21227665|ref|NP_633587.1| - 4.6e-13 49.0 0.0 1.3e-12 47.6 0.0 1.8 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.1 gi|21227665|ref|NP_633587.1| - 1.7e-12 47.9 1.0 1e-10 42.1 0.2 2.5 2 1 0 2 2 2 1 AAA domain TOBE_2 PF08402.5 gi|21227665|ref|NP_633587.1| - 3.3e-09 36.6 0.0 7e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.14 gi|21227665|ref|NP_633587.1| - 2.7e-05 23.4 2.2 0.0012 18.1 0.3 2.8 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21227665|ref|NP_633587.1| - 4.4e-05 22.6 2.2 0.0012 17.9 0.1 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|21227665|ref|NP_633587.1| - 0.00018 21.6 0.5 0.0026 17.9 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21227665|ref|NP_633587.1| - 0.004 17.1 0.0 0.0094 15.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.1 gi|21227665|ref|NP_633587.1| - 0.0066 16.3 0.0 0.041 13.7 0.0 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DEAD PF00270.24 gi|21227665|ref|NP_633587.1| - 0.01 15.3 0.0 0.021 14.3 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_23 PF13476.1 gi|21227665|ref|NP_633587.1| - 0.011 16.0 3.7 0.045 14.0 2.5 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|21227665|ref|NP_633587.1| - 0.014 14.9 0.1 0.026 14.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ResIII PF04851.10 gi|21227665|ref|NP_633587.1| - 0.024 14.4 0.1 0.085 12.6 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit CheB_methylest PF01339.12 gi|21227665|ref|NP_633587.1| - 0.047 13.1 0.0 0.095 12.1 0.0 1.5 1 1 0 1 1 1 0 CheB methylesterase Arch_ATPase PF01637.13 gi|21227665|ref|NP_633587.1| - 0.059 13.0 0.1 0.16 11.6 0.1 1.8 1 1 0 1 1 1 0 Archaeal ATPase IstB_IS21 PF01695.12 gi|21227665|ref|NP_633587.1| - 0.15 11.4 0.4 3.5 7.0 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein FmdE PF02663.9 gi|21227666|ref|NP_633588.1| - 5.7e-28 97.4 0.0 7.5e-28 97.0 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Fer4 PF00037.22 gi|21227667|ref|NP_633589.1| - 5.1e-52 171.5 84.2 2.1e-08 33.4 1.2 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227667|ref|NP_633589.1| - 1.2e-48 163.2 151.8 1e-10 41.8 8.1 6.0 1 1 8 9 9 9 9 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227667|ref|NP_633589.1| - 1.9e-35 119.1 80.9 1.9e-06 27.4 0.5 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21227667|ref|NP_633589.1| - 7.3e-35 119.0 58.8 1.5e-10 41.1 4.3 5.6 4 2 1 5 5 5 5 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227667|ref|NP_633589.1| - 3.4e-32 110.9 54.0 1.6e-11 44.7 3.3 7.1 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|21227667|ref|NP_633589.1| - 3.6e-29 100.3 62.7 2.8e-09 36.6 6.2 6.7 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227667|ref|NP_633589.1| - 1.7e-27 95.0 66.5 1.9e-07 30.8 5.8 6.4 4 2 4 8 8 8 8 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227667|ref|NP_633589.1| - 2.1e-25 88.5 134.5 1.3e-08 34.7 5.4 5.5 1 1 7 8 8 8 8 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227667|ref|NP_633589.1| - 9.8e-24 81.8 79.1 9.8e-07 28.3 2.1 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21227667|ref|NP_633589.1| - 1e-20 73.8 51.8 3e-05 24.2 6.6 5.8 5 1 0 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227667|ref|NP_633589.1| - 1e-18 65.9 76.4 0.00065 19.8 1.9 8.2 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227667|ref|NP_633589.1| - 1.2e-17 64.1 60.9 0.0012 19.2 0.4 8.1 7 1 1 8 8 8 7 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227667|ref|NP_633589.1| - 2.3e-13 49.6 107.9 0.0063 16.9 4.4 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21227667|ref|NP_633589.1| - 8.1e-09 35.9 67.0 0.025 15.1 0.7 8.7 7 2 1 8 8 8 5 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21227667|ref|NP_633589.1| - 0.0021 18.4 79.6 0.058 13.7 2.1 8.6 7 1 0 7 7 7 3 4Fe-4S single cluster domain Amidohydro_3 PF07969.6 gi|21227668|ref|NP_633590.1| - 2.1e-74 251.1 0.2 2.5e-74 250.9 0.1 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|21227668|ref|NP_633590.1| - 1e-10 41.2 0.1 1.1e-09 38.0 0.0 2.5 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|21227668|ref|NP_633590.1| - 4.5e-06 26.9 0.5 0.0015 18.6 0.1 2.5 2 0 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|21227668|ref|NP_633590.1| - 0.00018 21.2 0.5 0.26 10.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family GXGXG PF01493.14 gi|21227669|ref|NP_633591.1| - 9.7e-43 145.5 22.8 1.5e-42 144.9 15.8 1.2 1 0 0 1 1 1 1 GXGXG motif Molydop_binding PF01568.16 gi|21227670|ref|NP_633592.1| - 5.5e-16 58.3 0.0 7.1e-16 58.0 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.17 gi|21227671|ref|NP_633593.1| - 1.5e-15 56.9 0.0 5.5e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Cyt-b5 PF00173.23 gi|21227672|ref|NP_633594.1| - 1.3e-09 37.6 0.1 1.7e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ArdA PF07275.6 gi|21227672|ref|NP_633594.1| - 0.02 15.1 0.2 0.023 14.9 0.2 1.0 1 0 0 1 1 1 0 Antirestriction protein (ArdA) SIMPL PF04402.9 gi|21227673|ref|NP_633595.1| - 1.4e-49 168.8 11.1 1.7e-49 168.5 7.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) YbaB_DNA_bd PF02575.11 gi|21227673|ref|NP_633595.1| - 0.0062 16.3 3.5 0.0071 16.2 0.1 2.6 3 0 0 3 3 3 1 YbaB/EbfC DNA-binding family DUF4448 PF14610.1 gi|21227673|ref|NP_633595.1| - 0.033 13.6 0.3 0.17 11.3 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF4448) Acetyltransf_6 PF13480.1 gi|21227674|ref|NP_633596.1| - 1.1e-10 41.5 0.0 2e-09 37.5 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.11 gi|21227674|ref|NP_633596.1| - 0.00011 21.0 0.0 0.023 13.4 0.0 2.8 2 1 1 3 3 3 2 FemAB family Acetyltransf_9 PF13527.1 gi|21227674|ref|NP_633596.1| - 0.048 13.5 0.0 0.17 11.7 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4301 PF14134.1 gi|21227674|ref|NP_633596.1| - 0.12 10.9 0.0 0.19 10.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) MULE PF10551.4 gi|21227675|ref|NP_633597.1| - 3.6e-11 43.0 0.0 8.4e-11 41.8 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21227675|ref|NP_633597.1| - 0.0001 21.6 1.6 0.0006 19.1 1.1 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21227675|ref|NP_633597.1| - 0.023 14.2 1.9 0.033 13.7 0.6 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-ribbon_3 PF13248.1 gi|21227675|ref|NP_633597.1| - 0.57 9.4 2.7 0.28 10.4 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain CMAS PF02353.15 gi|21227676|ref|NP_633598.1| - 7.4e-12 44.9 0.0 2.1e-11 43.4 0.0 1.6 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.1 gi|21227676|ref|NP_633598.1| - 3.3e-11 42.9 0.0 4.5e-11 42.5 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227676|ref|NP_633598.1| - 5.2e-11 42.8 0.0 7.9e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227676|ref|NP_633598.1| - 5.1e-10 39.7 0.0 8.7e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227676|ref|NP_633598.1| - 1.4e-09 37.8 0.0 2.5e-09 37.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227676|ref|NP_633598.1| - 5.7e-09 36.5 0.0 9.2e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227676|ref|NP_633598.1| - 4.7e-08 33.2 0.0 6.8e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21227676|ref|NP_633598.1| - 4e-06 26.4 0.0 5.8e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|21227676|ref|NP_633598.1| - 2.3e-05 23.5 0.0 3.4e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.9 gi|21227676|ref|NP_633598.1| - 7.4e-05 22.1 0.0 0.00019 20.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|21227676|ref|NP_633598.1| - 0.00021 20.4 0.0 0.00032 19.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|21227676|ref|NP_633598.1| - 0.0017 18.3 0.0 0.0024 17.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|21227676|ref|NP_633598.1| - 0.01 14.9 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.6 gi|21227676|ref|NP_633598.1| - 0.017 14.5 0.0 0.035 13.4 0.0 1.6 2 0 0 2 2 2 0 Nodulation protein S (NodS) TPMT PF05724.6 gi|21227676|ref|NP_633598.1| - 0.028 13.8 0.0 0.035 13.5 0.0 1.1 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_15 PF09445.5 gi|21227676|ref|NP_633598.1| - 0.072 12.6 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF364 PF04016.7 gi|21227678|ref|NP_633600.1| - 7.2e-42 142.1 0.0 1.1e-41 141.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF364) DUF4213 PF13938.1 gi|21227678|ref|NP_633600.1| - 8.2e-24 83.5 0.0 1.4e-23 82.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4213) QRPTase_C PF01729.14 gi|21227679|ref|NP_633601.1| - 2.4e-27 95.4 0.0 4.1e-27 94.7 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|21227679|ref|NP_633601.1| - 5e-13 48.6 0.0 1.2e-12 47.4 0.0 1.7 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain Tropomodulin PF03250.9 gi|21227679|ref|NP_633601.1| - 0.0047 16.4 0.2 0.0095 15.4 0.1 1.5 1 0 0 1 1 1 1 Tropomodulin B12-binding PF02310.14 gi|21227679|ref|NP_633601.1| - 0.093 12.5 0.0 1.9 8.3 0.0 2.2 2 0 0 2 2 2 0 B12 binding domain ABC_tran PF00005.22 gi|21227680|ref|NP_633602.1| - 2.4e-31 108.8 0.0 4e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.12 gi|21227680|ref|NP_633602.1| - 7.8e-18 64.3 0.9 7.2e-15 54.8 0.1 3.1 2 1 0 2 2 2 2 TOBE domain AAA_21 PF13304.1 gi|21227680|ref|NP_633602.1| - 1.4e-09 38.3 0.2 0.00015 21.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21227680|ref|NP_633602.1| - 8.5e-06 25.1 0.1 0.00026 20.3 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.1 gi|21227680|ref|NP_633602.1| - 5.9e-05 22.9 0.1 0.00069 19.4 0.1 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.1 gi|21227680|ref|NP_633602.1| - 0.0002 21.4 0.0 0.00045 20.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|21227680|ref|NP_633602.1| - 0.00076 18.6 0.0 0.022 13.8 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain TOBE_2 PF08402.5 gi|21227680|ref|NP_633602.1| - 0.0046 16.9 0.1 0.012 15.6 0.1 1.8 1 1 0 1 1 1 1 TOBE domain T2SE PF00437.15 gi|21227680|ref|NP_633602.1| - 0.01 14.7 0.0 0.021 13.7 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|21227680|ref|NP_633602.1| - 0.015 14.8 0.1 0.03 13.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21227680|ref|NP_633602.1| - 0.015 15.4 0.1 0.055 13.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|21227680|ref|NP_633602.1| - 0.066 12.3 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NACHT PF05729.7 gi|21227680|ref|NP_633602.1| - 0.084 12.5 0.2 0.89 9.1 0.0 2.1 2 0 0 2 2 2 0 NACHT domain AAA_10 PF12846.2 gi|21227680|ref|NP_633602.1| - 0.12 11.7 0.0 0.54 9.6 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain Zeta_toxin PF06414.7 gi|21227680|ref|NP_633602.1| - 0.12 11.4 0.0 0.24 10.4 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin BPD_transp_1 PF00528.17 gi|21227681|ref|NP_633603.1| - 1.9e-17 63.3 13.0 1.9e-17 63.3 9.0 1.8 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.1 gi|21227682|ref|NP_633604.1| - 1.8e-46 158.6 0.0 2.1e-46 158.4 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.15 gi|21227682|ref|NP_633604.1| - 1.1e-05 24.8 0.0 1.8e-05 24.0 0.0 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|21227682|ref|NP_633604.1| - 0.0058 16.0 0.0 0.017 14.5 0.0 1.8 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein PBP_like PF12727.2 gi|21227682|ref|NP_633604.1| - 0.03 13.2 0.1 0.13 11.1 0.0 2.0 1 1 0 1 1 1 0 PBP superfamily domain YhfZ_C PF14503.1 gi|21227682|ref|NP_633604.1| - 0.053 12.8 0.4 0.14 11.5 0.2 1.6 2 0 0 2 2 2 0 YhfZ C-terminal domain Flavodoxin_2 PF02525.12 gi|21227683|ref|NP_633605.1| - 8.3e-56 188.6 0.1 9.8e-56 188.4 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.10 gi|21227683|ref|NP_633605.1| - 5.9e-16 58.3 0.1 1.1e-14 54.1 0.0 2.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Pox_A_type_inc PF04508.7 gi|21227683|ref|NP_633605.1| - 0.19 11.6 1.3 0.46 10.3 0.9 1.7 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat FMN_red PF03358.10 gi|21227684|ref|NP_633606.1| - 4.6e-29 100.8 0.0 5.9e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21227684|ref|NP_633606.1| - 5e-10 39.2 0.0 5.9e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.4 gi|21227684|ref|NP_633606.1| - 0.036 13.6 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) ABM PF03992.11 gi|21227685|ref|NP_633607.1| - 5.3e-19 68.0 0.0 6.9e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Xpo1 PF08389.7 gi|21227685|ref|NP_633607.1| - 0.024 14.5 0.2 0.2 11.5 0.2 1.9 1 1 0 1 1 1 0 Exportin 1-like protein DUF1160 PF06648.6 gi|21227685|ref|NP_633607.1| - 0.13 12.0 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) Nitroreductase PF00881.19 gi|21227686|ref|NP_633608.1| - 4.8e-35 120.8 0.0 7.2e-35 120.2 0.0 1.3 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|21227686|ref|NP_633608.1| - 0.053 12.7 0.3 5.2 6.1 0.0 2.3 1 1 1 2 2 2 0 Putative TM nitroreductase FMN_red PF03358.10 gi|21227687|ref|NP_633609.1| - 2.8e-26 91.8 0.0 3.2e-26 91.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21227687|ref|NP_633609.1| - 7.2e-14 51.7 0.0 8.2e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|21227687|ref|NP_633609.1| - 0.0018 18.3 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain HxlR PF01638.12 gi|21227688|ref|NP_633610.1| - 1.3e-34 117.6 0.1 1.6e-34 117.3 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.17 gi|21227688|ref|NP_633610.1| - 0.0024 17.5 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|21227688|ref|NP_633610.1| - 0.0054 16.4 0.0 0.0085 15.8 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family B-block_TFIIIC PF04182.7 gi|21227688|ref|NP_633610.1| - 0.012 15.4 0.0 0.031 14.1 0.0 1.8 1 1 1 2 2 2 0 B-block binding subunit of TFIIIC DUF505 PF04458.7 gi|21227688|ref|NP_633610.1| - 0.027 12.6 0.0 0.03 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_34 PF13601.1 gi|21227688|ref|NP_633610.1| - 0.052 13.5 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|21227688|ref|NP_633610.1| - 0.054 12.8 0.0 0.084 12.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|21227688|ref|NP_633610.1| - 0.064 13.0 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain RP-C PF03428.8 gi|21227688|ref|NP_633610.1| - 0.098 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_45 PF14947.1 gi|21227688|ref|NP_633610.1| - 0.1 12.4 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|21227688|ref|NP_633610.1| - 0.12 12.5 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Helicase_C_2 PF13307.1 gi|21227689|ref|NP_633611.1| - 1.2e-27 96.8 0.0 3.2e-27 95.5 0.0 1.7 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.10 gi|21227689|ref|NP_633611.1| - 1.3e-17 63.7 1.9 2e-16 59.8 1.3 2.2 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.10 gi|21227689|ref|NP_633611.1| - 1.7e-08 34.4 1.9 5.5e-08 32.8 1.3 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|21227689|ref|NP_633611.1| - 2.3e-05 23.9 0.2 0.001 18.5 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase PhoH PF02562.11 gi|21227689|ref|NP_633611.1| - 5.4e-05 22.5 0.1 0.00023 20.4 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein Zot PF05707.7 gi|21227689|ref|NP_633611.1| - 0.00073 19.0 0.0 0.069 12.6 0.0 2.4 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) KaiC PF06745.8 gi|21227689|ref|NP_633611.1| - 0.022 13.8 0.0 0.037 13.1 0.0 1.3 1 0 0 1 1 1 0 KaiC Sigma54_activat PF00158.21 gi|21227689|ref|NP_633611.1| - 0.032 13.7 0.1 0.092 12.2 0.1 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF2075 PF09848.4 gi|21227689|ref|NP_633611.1| - 0.043 12.7 1.1 1.1 8.2 0.1 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) MCM_N PF14551.1 gi|21227689|ref|NP_633611.1| - 0.065 13.7 0.0 0.15 12.5 0.0 1.8 1 0 0 1 1 1 0 MCM N-terminal domain AAA_34 PF13872.1 gi|21227689|ref|NP_633611.1| - 0.14 10.9 0.0 0.81 8.4 0.0 2.0 1 1 0 2 2 2 0 P-loop containing NTP hydrolase pore-1 Sigma54_activ_2 PF14532.1 gi|21227689|ref|NP_633611.1| - 0.14 12.2 0.1 6.5 6.8 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_22 PF13401.1 gi|21227689|ref|NP_633611.1| - 0.16 12.1 1.5 15 5.7 0.0 2.8 2 1 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|21227689|ref|NP_633611.1| - 0.16 10.8 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.24 gi|21227689|ref|NP_633611.1| - 0.56 10.4 6.8 16 5.6 2.5 3.2 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) PKD PF00801.15 gi|21227690|ref|NP_633612.1| - 1e-71 236.6 54.9 1.3e-20 72.8 8.1 4.6 4 0 0 4 4 4 4 PKD domain NosD PF05048.8 gi|21227690|ref|NP_633612.1| - 9.5e-56 188.5 36.6 9.5e-56 188.5 25.3 2.4 3 1 0 3 3 3 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21227690|ref|NP_633612.1| - 4.3e-12 46.0 52.2 4.3e-12 46.0 36.2 3.7 4 1 0 4 4 4 1 Right handed beta helix region ThiC-associated PF13667.1 gi|21227690|ref|NP_633612.1| - 0.12 11.9 1.8 14 5.3 0.1 2.7 2 0 0 2 2 2 0 ThiC-associated domain Cadherin PF00028.12 gi|21227690|ref|NP_633612.1| - 0.53 10.5 11.3 17 5.7 0.3 5.6 7 1 0 7 7 7 0 Cadherin domain Big_3_4 PF13754.1 gi|21227690|ref|NP_633612.1| - 0.8 10.0 73.5 0.97 9.8 2.8 7.5 4 2 4 8 8 8 0 Bacterial Ig-like domain (group 3) NosD PF05048.8 gi|21227691|ref|NP_633613.1| - 8.3e-57 192.0 30.7 8.3e-57 192.0 21.3 2.5 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|21227691|ref|NP_633613.1| - 8.5e-42 140.7 38.4 1.3e-16 60.0 3.0 4.5 4 0 0 4 4 4 4 PKD domain Beta_helix PF13229.1 gi|21227691|ref|NP_633613.1| - 2.2e-14 53.5 36.1 2.2e-14 53.5 25.0 3.2 2 1 0 2 2 2 1 Right handed beta helix region DUF3876 PF12992.2 gi|21227691|ref|NP_633613.1| - 0.14 12.1 2.2 35 4.4 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function, B. Theta Gene description (DUF3876) Spore_YtfJ PF09579.5 gi|21227692|ref|NP_633614.1| - 1.2e-20 73.0 3.8 2.1e-20 72.3 2.6 1.4 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) DUF2953 PF11167.3 gi|21227693|ref|NP_633615.1| - 1.8e-14 53.3 0.0 4.1e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) Tetraspannin PF00335.15 gi|21227693|ref|NP_633615.1| - 0.0098 15.1 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 1 Tetraspanin family CbiQ PF02361.11 gi|21227693|ref|NP_633615.1| - 0.015 14.9 0.0 0.084 12.4 0.0 2.0 2 0 0 2 2 2 0 Cobalt transport protein Phage-tail_3 PF13550.1 gi|21227693|ref|NP_633615.1| - 0.1 12.3 0.2 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Putative phage tail protein Srg PF02118.16 gi|21227693|ref|NP_633615.1| - 4.4 6.6 12.0 0.21 11.0 4.0 1.8 2 0 0 2 2 2 0 Srg family chemoreceptor GHMP_kinases_N PF00288.21 gi|21227694|ref|NP_633616.1| - 3e-10 40.0 0.7 6e-10 39.0 0.5 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|21227694|ref|NP_633616.1| - 1.3e-07 31.6 0.0 2.4e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal Nop PF01798.13 gi|21227695|ref|NP_633617.1| - 1.7e-56 189.7 0.2 2.8e-56 189.0 0.1 1.3 1 0 0 1 1 1 1 Putative snoRNA binding domain NOSIC PF08060.8 gi|21227695|ref|NP_633617.1| - 9.8e-11 41.2 0.0 2e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 NOSIC (NUC001) domain PspB PF06667.7 gi|21227695|ref|NP_633617.1| - 0.1 12.5 0.3 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 Phage shock protein B Fibrillarin PF01269.12 gi|21227696|ref|NP_633618.1| - 9.8e-88 292.9 0.0 1.1e-87 292.6 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin HTH_20 PF12840.2 gi|21227697|ref|NP_633619.1| - 3.9e-11 42.5 0.0 7e-11 41.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|21227697|ref|NP_633619.1| - 2.7e-10 39.7 0.3 4.3e-10 39.1 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|21227697|ref|NP_633619.1| - 8e-05 22.2 0.0 0.00019 21.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21227697|ref|NP_633619.1| - 0.00016 20.9 0.1 0.00044 19.5 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|21227697|ref|NP_633619.1| - 0.00022 20.8 0.2 0.0085 15.7 0.1 2.3 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|21227697|ref|NP_633619.1| - 0.00031 20.3 0.0 0.00054 19.5 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF4430 PF14478.1 gi|21227697|ref|NP_633619.1| - 0.0034 17.3 0.7 0.01 15.8 0.5 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) HTH_34 PF13601.1 gi|21227697|ref|NP_633619.1| - 0.0044 17.0 0.0 0.027 14.4 0.0 2.1 1 1 1 2 2 2 1 Winged helix DNA-binding domain HxlR PF01638.12 gi|21227697|ref|NP_633619.1| - 0.016 14.8 0.0 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_45 PF14947.1 gi|21227697|ref|NP_633619.1| - 0.024 14.4 0.0 0.075 12.8 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix Rrf2 PF02082.15 gi|21227697|ref|NP_633619.1| - 0.061 13.4 0.1 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator Nit_Regul_Hom PF10126.4 gi|21227697|ref|NP_633619.1| - 0.063 13.0 0.2 0.16 11.7 0.1 1.7 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII DUF4423 PF14394.1 gi|21227697|ref|NP_633619.1| - 0.092 12.2 0.0 0.15 11.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_IclR PF09339.5 gi|21227697|ref|NP_633619.1| - 0.1 12.1 0.0 0.33 10.5 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.14 gi|21227697|ref|NP_633619.1| - 0.11 12.4 0.4 0.3 11.0 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF2162 PF09930.4 gi|21227698|ref|NP_633620.1| - 1.9e-78 262.6 19.1 2.2e-78 262.4 13.2 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) ABC2_membrane_5 PF13346.1 gi|21227698|ref|NP_633620.1| - 0.17 11.1 22.3 0.9 8.7 4.5 2.2 1 1 1 2 2 2 0 ABC-2 family transporter protein MnhB PF04039.8 gi|21227698|ref|NP_633620.1| - 2.1 8.4 17.7 0.85 9.6 0.5 3.0 2 1 1 3 3 3 0 Domain related to MnhB subunit of Na+/H+ antiporter MotA_ExbB PF01618.11 gi|21227699|ref|NP_633621.1| - 4.8e-11 42.4 0.7 7.2e-11 41.8 0.4 1.3 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family VIT1 PF01988.14 gi|21227699|ref|NP_633621.1| - 5e-05 22.9 0.2 8.5e-05 22.1 0.1 1.4 1 1 0 1 1 1 1 VIT family Spore_III_AB PF09548.5 gi|21227699|ref|NP_633621.1| - 0.022 14.5 0.4 3.1 7.5 0.1 2.4 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4363 PF14276.1 gi|21227699|ref|NP_633621.1| - 0.042 13.5 0.1 0.079 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) MbeD_MobD PF04899.7 gi|21227699|ref|NP_633621.1| - 1.2 9.0 3.5 36 4.3 0.1 2.9 2 1 0 3 3 3 0 MbeD/MobD like DUF2149 PF09919.4 gi|21227700|ref|NP_633622.1| - 3.8e-32 110.2 0.2 4.8e-32 109.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) Zip PF02535.17 gi|21227701|ref|NP_633623.1| - 4.5e-26 91.6 20.9 3.2e-21 75.6 2.2 2.0 2 0 0 2 2 2 2 ZIP Zinc transporter E1-E2_ATPase PF00122.15 gi|21227701|ref|NP_633623.1| - 0.0096 14.9 0.0 0.022 13.7 0.0 1.6 1 1 0 1 1 1 1 E1-E2 ATPase SnoaL_2 PF12680.2 gi|21227702|ref|NP_633624.1| - 2.9e-10 40.4 0.0 3.3e-10 40.2 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.7 gi|21227702|ref|NP_633624.1| - 5.4e-06 26.0 0.0 6e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Lumazine_bd_2 PF12893.2 gi|21227702|ref|NP_633624.1| - 0.0029 18.1 0.2 0.0036 17.8 0.1 1.1 1 0 0 1 1 1 1 Putative lumazine-binding SnoaL_3 PF13474.1 gi|21227702|ref|NP_633624.1| - 0.0039 17.2 0.1 0.0077 16.2 0.1 1.5 1 1 0 1 1 1 1 SnoaL-like domain DUF3502 PF12010.3 gi|21227702|ref|NP_633624.1| - 0.057 13.3 0.1 0.071 13.0 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3502) CobN-Mg_chel PF02514.11 gi|21227703|ref|NP_633625.1| - 0 1211.1 0.0 0 1210.4 0.0 1.3 2 0 0 2 2 2 1 CobN/Magnesium Chelatase CobN-Mg_chel PF02514.11 gi|21227704|ref|NP_633626.1| - 0 1280.8 1.2 0 1280.8 0.0 1.5 2 0 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.1 gi|21227704|ref|NP_633626.1| - 1.9e-05 24.5 0.1 7.8e-05 22.6 0.1 2.1 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Cna_B PF05738.8 gi|21227704|ref|NP_633626.1| - 0.0014 18.3 0.1 0.0042 16.8 0.0 1.8 1 0 0 1 1 1 1 Cna protein B-type domain UPF0066 PF01980.11 gi|21227705|ref|NP_633627.1| - 1.8e-34 118.2 0.0 2.2e-34 118.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0066 FmdE PF02663.9 gi|21227706|ref|NP_633628.1| - 1.4e-30 105.8 0.0 1.7e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.12 gi|21227706|ref|NP_633628.1| - 5e-06 26.1 0.5 1.1e-05 24.9 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger zf-RING_3 PF14369.1 gi|21227706|ref|NP_633628.1| - 0.072 13.0 0.3 0.59 10.1 0.0 2.3 2 0 0 2 2 2 0 zinc-finger Auto_anti-p27 PF06677.7 gi|21227706|ref|NP_633628.1| - 0.11 12.3 1.3 0.24 11.2 0.9 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF1936 PF09151.5 gi|21227706|ref|NP_633628.1| - 0.21 11.1 1.3 0.55 9.7 0.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) TF_Zn_Ribbon PF08271.7 gi|21227706|ref|NP_633628.1| - 1.2 8.5 4.6 19 4.6 3.2 2.6 1 1 0 1 1 1 0 TFIIB zinc-binding DUF1724 PF08350.5 gi|21227707|ref|NP_633629.1| - 6.5e-27 92.8 0.0 1.3e-26 91.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_11 PF08279.7 gi|21227707|ref|NP_633629.1| - 0.037 13.6 0.0 0.5 10.0 0.0 2.2 2 0 0 2 2 2 0 HTH domain HTH_27 PF13463.1 gi|21227707|ref|NP_633629.1| - 0.11 12.7 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain IF-2B PF01008.12 gi|21227708|ref|NP_633630.1| - 8.8e-82 274.2 0.6 1e-81 274.0 0.4 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Acetyltransf_1 PF00583.19 gi|21227709|ref|NP_633631.1| - 1.5e-16 60.1 0.0 2e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21227709|ref|NP_633631.1| - 1.3e-11 44.5 0.1 1.9e-11 43.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21227709|ref|NP_633631.1| - 5.4e-08 32.9 0.7 6.8e-08 32.5 0.5 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21227709|ref|NP_633631.1| - 2.8e-07 30.6 0.0 3.6e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21227709|ref|NP_633631.1| - 1.3e-05 24.8 0.0 1.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|21227709|ref|NP_633631.1| - 1.5e-05 24.7 0.0 2.7e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.1 gi|21227709|ref|NP_633631.1| - 4.9e-05 23.5 0.1 5.6e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21227709|ref|NP_633631.1| - 0.00033 20.5 0.0 0.00055 19.8 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|21227709|ref|NP_633631.1| - 0.0012 18.8 0.0 0.0014 18.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21227709|ref|NP_633631.1| - 0.0015 18.3 0.0 0.0017 18.1 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF3749 PF12568.3 gi|21227709|ref|NP_633631.1| - 0.019 14.5 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Mec-17 PF05301.6 gi|21227709|ref|NP_633631.1| - 0.059 13.3 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 Touch receptor neuron protein Mec-17 DUF2264 PF10022.4 gi|21227709|ref|NP_633631.1| - 0.092 11.3 0.0 0.13 10.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2264) EndoU_bacteria PF14436.1 gi|21227709|ref|NP_633631.1| - 0.1 12.4 1.1 0.53 10.1 0.1 2.0 1 1 1 2 2 2 0 Bacterial EndoU nuclease ABC_tran PF00005.22 gi|21227710|ref|NP_633632.1| - 5e-34 117.5 0.2 1e-33 116.5 0.0 1.6 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|21227710|ref|NP_633632.1| - 8.1e-10 39.1 0.1 1.9e-07 31.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21227710|ref|NP_633632.1| - 3e-09 36.4 0.1 4.8e-06 25.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21227710|ref|NP_633632.1| - 0.00015 21.2 0.1 0.00031 20.2 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.1 gi|21227710|ref|NP_633632.1| - 0.0013 18.5 0.5 0.0086 15.9 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|21227710|ref|NP_633632.1| - 0.0016 18.4 2.2 0.012 15.6 1.5 2.1 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.1 gi|21227710|ref|NP_633632.1| - 0.0016 18.2 0.1 0.02 14.7 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.1 gi|21227710|ref|NP_633632.1| - 0.0034 17.5 0.9 0.022 14.8 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|21227710|ref|NP_633632.1| - 0.0036 16.7 0.6 0.0072 15.8 0.1 1.8 2 1 0 2 2 2 1 AAA-like domain AAA_19 PF13245.1 gi|21227710|ref|NP_633632.1| - 0.0037 16.9 1.3 0.093 12.4 0.2 2.7 3 1 0 3 3 2 1 Part of AAA domain DUF258 PF03193.11 gi|21227710|ref|NP_633632.1| - 0.0047 16.1 0.1 0.011 14.8 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|21227710|ref|NP_633632.1| - 0.0085 15.5 0.9 0.033 13.5 0.1 2.1 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|21227710|ref|NP_633632.1| - 0.0091 16.8 1.1 0.018 15.8 0.8 1.8 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|21227710|ref|NP_633632.1| - 0.012 15.0 0.4 1.4 8.3 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_18 PF13238.1 gi|21227710|ref|NP_633632.1| - 0.014 15.7 3.1 0.47 10.7 2.2 2.5 1 1 0 1 1 1 0 AAA domain KaiC PF06745.8 gi|21227710|ref|NP_633632.1| - 0.019 14.0 0.7 0.98 8.4 0.0 2.3 2 0 0 2 2 2 0 KaiC AAA_30 PF13604.1 gi|21227710|ref|NP_633632.1| - 0.02 14.4 0.4 0.1 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|21227710|ref|NP_633632.1| - 0.022 13.6 0.1 0.048 12.5 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein IstB_IS21 PF01695.12 gi|21227710|ref|NP_633632.1| - 0.028 13.8 0.1 0.29 10.5 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.1 gi|21227710|ref|NP_633632.1| - 0.029 14.7 1.3 0.11 12.7 0.2 2.1 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|21227710|ref|NP_633632.1| - 0.03 13.8 0.4 2.7 7.4 0.1 2.3 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein ABC_ATPase PF09818.4 gi|21227710|ref|NP_633632.1| - 0.036 12.6 0.1 0.51 8.8 0.1 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class NB-ARC PF00931.17 gi|21227710|ref|NP_633632.1| - 0.047 12.5 1.8 2.3 7.0 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain Rad17 PF03215.10 gi|21227710|ref|NP_633632.1| - 0.085 11.5 0.0 0.087 11.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein NACHT PF05729.7 gi|21227710|ref|NP_633632.1| - 0.13 11.9 2.1 0.2 11.2 0.1 2.2 2 1 1 3 3 3 0 NACHT domain Arch_ATPase PF01637.13 gi|21227710|ref|NP_633632.1| - 0.13 11.8 0.3 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Archaeal ATPase DUF87 PF01935.12 gi|21227710|ref|NP_633632.1| - 0.19 11.5 1.7 0.39 10.4 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF87 MacB_PCD PF12704.2 gi|21227711|ref|NP_633633.1| - 9.7e-36 123.5 0.6 9.7e-36 123.5 0.4 3.0 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21227711|ref|NP_633633.1| - 5.6e-23 80.9 19.1 5.6e-23 80.9 10.7 2.3 2 0 0 2 2 2 1 FtsX-like permease family AA_kinase PF00696.23 gi|21227713|ref|NP_633635.1| - 6.7e-27 94.5 0.4 8.2e-27 94.2 0.3 1.1 1 0 0 1 1 1 1 Amino acid kinase family DUF111 PF01969.12 gi|21227715|ref|NP_633637.1| - 1.7e-21 76.4 0.0 2.1e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF111 TetR_N PF00440.18 gi|21227716|ref|NP_633638.1| - 4.9e-17 61.2 0.0 8e-17 60.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Aldo_ket_red PF00248.16 gi|21227717|ref|NP_633639.1| - 8.1e-43 146.2 0.0 9.8e-43 145.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|21227717|ref|NP_633639.1| - 2.2e-12 47.1 6.6 4.6e-12 46.0 4.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227717|ref|NP_633639.1| - 4.1e-09 36.5 7.4 7.6e-09 35.7 5.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21227717|ref|NP_633639.1| - 1.1e-07 32.1 0.7 0.00038 20.8 0.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227717|ref|NP_633639.1| - 2.3e-07 30.7 7.2 4.1e-07 29.9 5.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227717|ref|NP_633639.1| - 0.00022 20.9 9.0 0.0017 18.0 6.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227717|ref|NP_633639.1| - 0.0013 18.5 6.4 0.13 12.1 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227717|ref|NP_633639.1| - 0.0015 19.2 5.0 0.31 11.8 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|21227717|ref|NP_633639.1| - 0.0019 17.6 10.2 0.0038 16.7 1.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.1 gi|21227717|ref|NP_633639.1| - 0.003 17.1 2.9 0.014 15.0 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.2 gi|21227717|ref|NP_633639.1| - 0.061 13.2 1.1 0.061 13.2 0.8 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain NPR1_like_C PF12313.3 gi|21227717|ref|NP_633639.1| - 0.16 11.3 0.1 0.75 9.1 0.0 1.9 2 0 0 2 2 2 0 NPR1/NIM1 like defence protein C terminal Fer4_2 PF12797.2 gi|21227717|ref|NP_633639.1| - 0.31 11.0 12.6 0.94 9.5 1.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21227717|ref|NP_633639.1| - 0.42 11.0 13.2 1.3 9.5 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227717|ref|NP_633639.1| - 0.67 10.3 13.4 5.5 7.4 9.3 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain AIRC PF00731.15 gi|21227718|ref|NP_633640.1| - 3.7e-22 78.2 2.7 3.7e-22 78.2 1.9 1.6 2 0 0 2 2 2 1 AIR carboxylase DUF111 PF01969.12 gi|21227719|ref|NP_633641.1| - 2.3e-131 438.1 0.1 2.6e-131 437.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Semialdhyde_dhC PF02774.13 gi|21227720|ref|NP_633642.1| - 4.5e-37 127.6 0.0 7.5e-37 126.9 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.19 gi|21227720|ref|NP_633642.1| - 1.1e-34 119.2 0.0 1.7e-34 118.6 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.17 gi|21227720|ref|NP_633642.1| - 2.4e-05 24.8 0.1 4.3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DXP_reductoisom PF02670.11 gi|21227720|ref|NP_633642.1| - 0.0022 18.5 0.0 0.0044 17.5 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase NAD_binding_10 PF13460.1 gi|21227720|ref|NP_633642.1| - 0.0056 16.7 0.1 0.01 15.8 0.1 1.4 1 0 0 1 1 1 1 NADH(P)-binding DapB_N PF01113.15 gi|21227720|ref|NP_633642.1| - 0.0077 16.1 0.0 0.015 15.2 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_C PF02800.15 gi|21227720|ref|NP_633642.1| - 0.12 11.7 0.0 0.42 10.0 0.0 1.8 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Fer4 PF00037.22 gi|21227721|ref|NP_633643.1| - 4.3e-18 64.0 18.2 2e-09 36.6 3.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227721|ref|NP_633643.1| - 7.2e-15 54.5 26.0 3.2e-10 39.6 9.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227721|ref|NP_633643.1| - 1e-12 48.2 13.6 1.3e-12 47.9 9.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227721|ref|NP_633643.1| - 1.3e-11 44.5 12.9 1.5e-11 44.3 8.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227721|ref|NP_633643.1| - 5.3e-11 41.8 17.4 4.2e-06 26.3 3.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227721|ref|NP_633643.1| - 5.7e-11 41.6 16.5 2.8e-06 26.8 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227721|ref|NP_633643.1| - 1.4e-09 38.5 13.3 1.5e-05 25.6 1.0 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21227721|ref|NP_633643.1| - 3.8e-09 36.2 14.5 9.5e-09 34.9 10.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227721|ref|NP_633643.1| - 1.6e-08 34.3 6.5 1.7e-08 34.2 4.5 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227721|ref|NP_633643.1| - 8.8e-08 31.8 14.9 0.001 19.2 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21227721|ref|NP_633643.1| - 1.1e-07 32.0 13.6 8.8e-05 22.7 9.5 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227721|ref|NP_633643.1| - 2.5e-07 31.1 17.3 0.00013 22.4 2.3 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|21227721|ref|NP_633643.1| - 2.9e-07 30.4 14.6 1.4e-06 28.2 10.2 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227721|ref|NP_633643.1| - 2.5e-06 27.6 20.3 0.0038 17.6 4.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21227721|ref|NP_633643.1| - 1.2e-05 25.5 19.0 0.0053 17.1 4.4 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21227721|ref|NP_633643.1| - 0.00068 19.9 17.7 0.0089 16.4 3.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain HemN_C PF06969.11 gi|21227722|ref|NP_633644.1| - 0.0016 18.4 0.1 0.0023 17.9 0.1 1.3 1 0 0 1 1 1 1 HemN C-terminal domain HTH_45 PF14947.1 gi|21227722|ref|NP_633644.1| - 0.0038 17.0 0.1 0.0059 16.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix cobW PF02492.14 gi|21227723|ref|NP_633645.1| - 7.1e-37 126.5 0.1 9.7e-37 126.1 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|21227723|ref|NP_633645.1| - 0.00061 18.6 0.6 0.0065 15.2 0.4 2.2 1 1 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|21227723|ref|NP_633645.1| - 0.00093 18.9 0.0 0.0021 17.7 0.0 1.7 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|21227723|ref|NP_633645.1| - 0.0028 16.7 0.0 0.0052 15.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin Viral_helicase1 PF01443.13 gi|21227723|ref|NP_633645.1| - 0.0079 15.7 0.1 0.015 14.8 0.1 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.1 gi|21227723|ref|NP_633645.1| - 0.01 16.1 0.3 0.037 14.3 0.1 2.0 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.4 gi|21227723|ref|NP_633645.1| - 0.019 13.5 0.2 0.03 12.9 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.2 gi|21227723|ref|NP_633645.1| - 0.021 14.2 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_19 PF13245.1 gi|21227723|ref|NP_633645.1| - 0.024 14.3 0.0 0.061 13.0 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain ATP_bind_1 PF03029.12 gi|21227723|ref|NP_633645.1| - 0.032 13.7 0.0 0.3 10.6 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SRP54 PF00448.17 gi|21227723|ref|NP_633645.1| - 0.033 13.6 0.1 0.063 12.7 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.1 gi|21227723|ref|NP_633645.1| - 0.047 13.8 0.0 0.098 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|21227723|ref|NP_633645.1| - 0.056 13.1 1.0 0.24 11.1 0.1 2.3 2 1 0 2 2 2 0 NTPase LpxK PF02606.9 gi|21227723|ref|NP_633645.1| - 0.09 11.7 0.0 0.18 10.7 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase PduV-EutP PF10662.4 gi|21227723|ref|NP_633645.1| - 0.18 11.2 1.1 0.56 9.6 0.1 2.3 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation AAA_11 PF13086.1 gi|21227723|ref|NP_633645.1| - 0.56 9.7 3.2 9.4 5.7 0.1 2.6 3 1 0 3 3 3 0 AAA domain HTH_45 PF14947.1 gi|21227724|ref|NP_633646.1| - 1.8e-05 24.4 0.1 3e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_N PF14338.1 gi|21227724|ref|NP_633646.1| - 0.033 14.2 0.0 0.046 13.8 0.0 1.3 1 1 0 1 1 1 0 Mrr N-terminal domain HTH_12 PF08461.5 gi|21227724|ref|NP_633646.1| - 0.042 13.5 0.6 0.067 12.9 0.1 1.6 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain DnaB_C PF03796.10 gi|21227725|ref|NP_633647.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21227725|ref|NP_633647.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21227725|ref|NP_633647.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21227725|ref|NP_633647.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.9 gi|21227726|ref|NP_633648.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21227726|ref|NP_633648.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21227726|ref|NP_633648.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21227726|ref|NP_633648.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21227726|ref|NP_633648.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21227726|ref|NP_633648.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain MORN_2 PF07661.8 gi|21227727|ref|NP_633649.1| - 0.0093 15.8 0.7 6.4 7.1 0.0 3.3 2 1 1 3 3 3 2 MORN repeat variant Pput2613-deam PF14427.1 gi|21227727|ref|NP_633649.1| - 0.028 14.0 1.2 0.066 12.9 0.2 1.9 1 1 1 2 2 2 0 Pput_2613-like deaminase CopK PF11525.3 gi|21227727|ref|NP_633649.1| - 1.9 8.1 5.8 2.6 7.7 1.0 2.2 2 0 0 2 2 2 0 Copper resistance protein K Radical_SAM PF04055.16 gi|21227728|ref|NP_633650.1| - 4e-09 36.8 0.3 6.9e-09 36.0 0.2 1.4 1 0 0 1 1 1 1 Radical SAM superfamily DeoC PF01791.4 gi|21227729|ref|NP_633651.1| - 6.3e-54 182.7 0.0 7.6e-54 182.4 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.19 gi|21227729|ref|NP_633651.1| - 5.5e-06 25.9 0.0 8e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.9 gi|21227729|ref|NP_633651.1| - 0.018 14.0 1.2 0.042 12.9 0.2 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Flu_B_M2 PF04772.7 gi|21227729|ref|NP_633651.1| - 0.11 12.5 0.3 0.29 11.2 0.1 1.8 2 0 0 2 2 2 0 Influenza B matrix protein 2 (BM2) dUTPase PF00692.14 gi|21227730|ref|NP_633652.1| - 2.3e-11 43.2 0.0 3.3e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.6 gi|21227730|ref|NP_633652.1| - 0.037 12.4 0.0 0.17 10.2 0.0 1.9 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF2341 PF10102.4 gi|21227731|ref|NP_633653.1| - 3.1e-26 91.3 0.0 8.3e-26 89.9 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) FMN_red PF03358.10 gi|21227733|ref|NP_633655.1| - 4e-26 91.3 0.0 4.6e-26 91.1 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21227733|ref|NP_633655.1| - 4.9e-21 75.1 0.0 6e-21 74.8 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|21227733|ref|NP_633655.1| - 0.0012 18.8 0.0 0.042 13.8 0.0 2.2 1 1 1 2 2 2 1 Flavodoxin domain FMN_red PF03358.10 gi|21227734|ref|NP_633656.1| - 8.2e-25 87.0 0.0 8.8e-25 86.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21227734|ref|NP_633656.1| - 9e-20 71.0 0.0 1e-19 70.8 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|21227734|ref|NP_633656.1| - 0.03 14.3 0.0 0.23 11.4 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|21227734|ref|NP_633656.1| - 0.12 12.3 0.1 8.7 6.3 0.0 2.2 2 1 0 2 2 2 0 Flavodoxin MacB_PCD PF12704.2 gi|21227735|ref|NP_633657.1| - 9.9e-40 136.5 6.6 9.9e-40 136.5 4.6 2.1 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21227735|ref|NP_633657.1| - 3.6e-22 78.3 19.3 3.8e-22 78.3 9.5 2.2 2 0 0 2 2 2 1 FtsX-like permease family Toxin_61 PF15538.1 gi|21227735|ref|NP_633657.1| - 0.068 13.1 0.9 0.15 12.0 0.1 1.9 2 0 0 2 2 2 0 Putative toxin 61 SelR PF01641.13 gi|21227736|ref|NP_633658.1| - 4e-53 178.3 0.2 4.8e-53 178.1 0.1 1.0 1 0 0 1 1 1 1 SelR domain TF_Zn_Ribbon PF08271.7 gi|21227736|ref|NP_633658.1| - 0.0019 17.4 0.5 1.7 8.0 0.1 2.6 2 0 0 2 2 2 2 TFIIB zinc-binding DUF2296 PF10058.4 gi|21227736|ref|NP_633658.1| - 0.0022 17.6 1.1 0.081 12.6 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane metal-binding protein (DUF2296) DUF2318 PF10080.4 gi|21227736|ref|NP_633658.1| - 0.011 15.4 0.8 4.2 7.1 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf-ribbon_3 PF13248.1 gi|21227736|ref|NP_633658.1| - 0.012 14.7 2.4 2.7 7.2 0.4 2.5 2 1 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|21227736|ref|NP_633658.1| - 0.014 14.8 5.0 0.033 13.6 0.2 2.5 3 0 0 3 3 3 0 A2L zinc ribbon domain GFA PF04828.9 gi|21227736|ref|NP_633658.1| - 0.018 14.9 1.0 4 7.4 0.0 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF2082 PF09855.4 gi|21227736|ref|NP_633658.1| - 0.022 14.6 0.3 0.27 11.0 0.0 2.1 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DUF678 PF05077.7 gi|21227736|ref|NP_633658.1| - 0.023 14.6 0.1 5.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) DZR PF12773.2 gi|21227736|ref|NP_633658.1| - 0.032 14.0 1.0 0.23 11.3 0.7 2.2 1 1 0 1 1 1 0 Double zinc ribbon Yippee-Mis18 PF03226.9 gi|21227736|ref|NP_633658.1| - 0.037 14.0 0.6 0.15 12.0 0.4 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zinc_ribbon_2 PF13240.1 gi|21227736|ref|NP_633658.1| - 0.045 13.2 0.9 3.3 7.2 0.0 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|21227736|ref|NP_633658.1| - 0.091 12.5 2.2 6.8 6.5 0.2 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain HNH_5 PF14279.1 gi|21227736|ref|NP_633658.1| - 0.11 12.4 0.0 0.64 10.0 0.0 2.0 2 0 0 2 2 2 0 HNH endonuclease Ribosomal_L37e PF01907.14 gi|21227736|ref|NP_633658.1| - 0.18 11.6 1.0 18 5.2 0.1 2.4 2 0 0 2 2 2 0 Ribosomal protein L37e zf-NADH-PPase PF09297.6 gi|21227736|ref|NP_633658.1| - 1.6 8.3 4.3 20 4.7 0.6 2.5 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain HAD_2 PF13419.1 gi|21227737|ref|NP_633659.1| - 6.2e-28 98.2 0.0 7.5e-28 97.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21227737|ref|NP_633659.1| - 1.6e-10 41.7 0.0 1.2e-09 38.9 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21227737|ref|NP_633659.1| - 7.4e-08 32.0 0.0 1.5e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|21227737|ref|NP_633659.1| - 6.9e-07 29.6 0.0 8.2e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NIF PF03031.13 gi|21227737|ref|NP_633659.1| - 0.00028 20.5 0.0 0.0076 15.9 0.0 2.2 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase NT5C PF06941.7 gi|21227737|ref|NP_633659.1| - 0.023 14.2 0.2 0.054 13.0 0.1 1.7 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.1 gi|21227737|ref|NP_633659.1| - 0.13 12.1 0.0 1.4 8.8 0.0 2.6 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Glyco_trans_1_3 PF13528.1 gi|21227738|ref|NP_633660.1| - 1e-31 110.3 0.0 3.1e-17 62.7 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|21227738|ref|NP_633660.1| - 1.2e-12 47.8 0.0 2e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.15 gi|21227738|ref|NP_633660.1| - 6.9e-08 32.3 0.0 3.5e-07 30.0 0.0 2.1 2 1 1 3 3 3 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_4_2 PF13477.1 gi|21227738|ref|NP_633660.1| - 3e-06 27.0 0.0 8.4e-06 25.6 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like UDPGT PF00201.13 gi|21227738|ref|NP_633660.1| - 4.1e-06 25.6 0.0 0.00021 19.9 0.0 2.0 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.1 gi|21227738|ref|NP_633660.1| - 7.1e-05 22.9 0.0 0.00015 21.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21227738|ref|NP_633660.1| - 0.00047 20.3 0.0 0.00079 19.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|21227738|ref|NP_633660.1| - 0.0008 18.8 0.0 0.0016 17.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21227738|ref|NP_633660.1| - 0.079 12.6 0.0 1.8 8.2 0.0 2.1 1 1 0 1 1 1 0 Glycosyltransferase Family 4 DUF457 PF04307.9 gi|21227739|ref|NP_633661.1| - 1.8e-10 40.3 14.4 6e-10 38.6 10.0 1.7 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF3353 PF11833.3 gi|21227739|ref|NP_633661.1| - 0.29 10.5 6.1 0.87 9.0 2.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3353) FtsX PF02687.16 gi|21227739|ref|NP_633661.1| - 3.8 7.2 16.4 0.071 12.8 3.0 2.9 2 2 0 2 2 2 0 FtsX-like permease family Glycos_transf_2 PF00535.21 gi|21227740|ref|NP_633662.1| - 3.9e-26 91.7 0.0 6.4e-26 91.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227740|ref|NP_633662.1| - 8e-07 29.0 0.0 9.4e-07 28.8 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21227740|ref|NP_633662.1| - 0.00017 21.8 0.0 0.00035 20.8 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.1 gi|21227740|ref|NP_633662.1| - 0.0061 15.8 0.0 0.0099 15.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 PGM_PMM_II PF02879.11 gi|21227740|ref|NP_633662.1| - 0.026 14.8 0.0 0.12 12.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Cys_Met_Meta_PP PF01053.15 gi|21227740|ref|NP_633662.1| - 0.16 10.2 0.0 0.25 9.5 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme RseC_MucC PF04246.7 gi|21227740|ref|NP_633662.1| - 0.18 11.3 1.1 0.33 10.5 0.8 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Hexapep PF00132.19 gi|21227741|ref|NP_633663.1| - 9.7e-12 43.8 8.5 1.6e-08 33.6 0.7 3.7 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21227741|ref|NP_633663.1| - 2.4e-06 26.9 4.2 0.0019 17.6 0.5 3.1 2 2 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF3473 PF11959.3 gi|21227742|ref|NP_633664.1| - 8.5e-33 112.6 0.1 1.2e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.16 gi|21227742|ref|NP_633664.1| - 4.2e-26 90.9 0.0 7.1e-26 90.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.10 gi|21227742|ref|NP_633664.1| - 6.9e-05 21.9 0.1 0.00013 21.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glycos_transf_1 PF00534.15 gi|21227743|ref|NP_633665.1| - 1.3e-30 106.0 0.2 1.9e-30 105.5 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21227743|ref|NP_633665.1| - 1.9e-13 50.7 0.0 1.1e-12 48.2 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21227743|ref|NP_633665.1| - 3.6e-06 27.1 0.0 9.1e-06 25.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21227743|ref|NP_633665.1| - 0.0034 17.5 0.0 0.0053 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|21227743|ref|NP_633665.1| - 0.0045 16.8 0.1 0.011 15.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|21227743|ref|NP_633665.1| - 0.02 14.5 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 DUF2206 PF09971.4 gi|21227744|ref|NP_633666.1| - 3.5e-38 131.3 41.3 3.5e-38 131.3 28.6 4.1 3 2 1 4 4 4 1 Predicted membrane protein (DUF2206) DUF1616 PF07760.6 gi|21227744|ref|NP_633666.1| - 3.9e-29 101.6 26.7 3.9e-29 101.6 18.5 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF1616) Polysacc_synt PF01943.12 gi|21227745|ref|NP_633667.1| - 3.6e-11 42.8 40.9 3.6e-11 42.8 28.3 2.4 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21227745|ref|NP_633667.1| - 8.8e-08 31.9 55.1 7.8e-05 22.2 18.8 2.1 1 1 1 2 2 2 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|21227745|ref|NP_633667.1| - 1.2e-07 31.5 10.6 1.2e-07 31.5 7.3 4.7 2 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Methyltransf_11 PF08241.7 gi|21227746|ref|NP_633668.1| - 8.1e-20 71.1 0.0 1.7e-19 70.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227746|ref|NP_633668.1| - 4e-16 59.1 0.0 5.5e-16 58.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227746|ref|NP_633668.1| - 3.3e-12 46.2 0.0 8.4e-12 44.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227746|ref|NP_633668.1| - 5.7e-11 42.7 0.0 1.6e-10 41.3 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227746|ref|NP_633668.1| - 1.6e-08 35.0 0.0 3.9e-08 33.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227746|ref|NP_633668.1| - 3.7e-07 30.4 0.0 6.8e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|21227746|ref|NP_633668.1| - 2.5e-06 26.5 0.0 3.4e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_29 PF03141.11 gi|21227746|ref|NP_633668.1| - 1.2e-05 23.9 0.1 2.3e-05 22.9 0.0 1.6 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase MetW PF07021.7 gi|21227746|ref|NP_633668.1| - 1.2e-05 24.7 0.0 2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.13 gi|21227746|ref|NP_633668.1| - 0.00011 21.4 0.0 0.00015 21.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.9 gi|21227746|ref|NP_633668.1| - 0.012 15.0 0.0 0.018 14.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|21227746|ref|NP_633668.1| - 0.039 13.9 0.0 0.085 12.8 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|21227746|ref|NP_633668.1| - 0.09 12.1 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF362 PF04015.7 gi|21227747|ref|NP_633669.1| - 1.1e-16 60.9 0.0 1.6e-16 60.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF362) SDF PF00375.13 gi|21227748|ref|NP_633670.1| - 0.051 12.3 3.8 0.058 12.1 2.6 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family Transport_MerF PF11431.3 gi|21227748|ref|NP_633670.1| - 0.086 12.5 1.0 0.1 12.2 0.1 1.7 2 0 0 2 2 2 0 Membrane transport protein MerF DUF2985 PF11204.3 gi|21227748|ref|NP_633670.1| - 0.21 11.3 1.5 0.46 10.2 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2985) MtaB PF12176.3 gi|21227749|ref|NP_633671.1| - 1.1e-253 841.7 5.3 1.2e-253 841.5 3.7 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit B12-binding PF02310.14 gi|21227750|ref|NP_633672.1| - 1.5e-18 66.8 0.2 2.5e-18 66.0 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21227750|ref|NP_633672.1| - 1.2e-13 50.8 0.5 4.3e-13 49.0 0.1 2.1 2 0 0 2 2 2 1 B12 binding domain DUF1724 PF08350.5 gi|21227751|ref|NP_633673.1| - 2.6e-24 84.4 0.2 7.4e-24 83.0 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_45 PF14947.1 gi|21227751|ref|NP_633673.1| - 0.0042 16.8 0.0 0.0092 15.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.1 gi|21227751|ref|NP_633673.1| - 0.012 15.9 0.0 0.021 15.1 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1724 PF08350.5 gi|21227752|ref|NP_633674.1| - 4.9e-28 96.4 0.3 8.7e-28 95.6 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21227752|ref|NP_633674.1| - 0.00024 20.7 0.3 0.0004 19.9 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|21227752|ref|NP_633674.1| - 0.00054 19.6 0.1 0.0012 18.5 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|21227752|ref|NP_633674.1| - 0.001 19.3 0.1 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|21227752|ref|NP_633674.1| - 0.014 15.0 0.3 0.025 14.1 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.2 gi|21227752|ref|NP_633674.1| - 0.02 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|21227752|ref|NP_633674.1| - 0.027 13.8 0.3 0.051 12.9 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF4423 PF14394.1 gi|21227752|ref|NP_633674.1| - 0.048 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_45 PF14947.1 gi|21227752|ref|NP_633674.1| - 0.059 13.1 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix Sin3_corepress PF08295.7 gi|21227752|ref|NP_633674.1| - 0.083 12.6 0.3 0.18 11.5 0.1 1.6 2 0 0 2 2 2 0 Sin3 family co-repressor MarR PF01047.17 gi|21227752|ref|NP_633674.1| - 0.12 12.1 0.1 0.26 11.0 0.1 1.5 1 0 0 1 1 1 0 MarR family UDG PF03167.14 gi|21227753|ref|NP_633675.1| - 8.7e-13 48.0 0.0 9.8e-13 47.8 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Fer4 PF00037.22 gi|21227754|ref|NP_633676.1| - 2.1e-18 65.0 23.1 2.8e-09 36.1 4.2 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227754|ref|NP_633676.1| - 1.7e-11 43.4 21.7 7.5e-06 25.5 2.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227754|ref|NP_633676.1| - 2.6e-11 43.6 16.8 3.3e-11 43.3 11.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227754|ref|NP_633676.1| - 3.7e-11 43.1 16.3 4.7e-11 42.7 11.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227754|ref|NP_633676.1| - 1.1e-10 41.0 15.6 1.4e-10 40.7 10.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227754|ref|NP_633676.1| - 5.8e-10 38.5 22.3 1.9e-05 24.2 3.2 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227754|ref|NP_633676.1| - 1.1e-09 37.9 18.8 5.2e-09 35.8 13.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227754|ref|NP_633676.1| - 6.4e-08 32.3 18.3 0.00036 20.6 2.5 2.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227754|ref|NP_633676.1| - 1.5e-07 32.0 14.7 0.0012 19.5 2.7 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21227754|ref|NP_633676.1| - 1.7e-07 31.1 16.9 3.3e-06 27.0 11.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21227754|ref|NP_633676.1| - 1e-06 28.5 8.6 1.1e-06 28.4 6.0 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227754|ref|NP_633676.1| - 1.7e-05 25.2 23.0 0.00032 21.2 5.1 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21227754|ref|NP_633676.1| - 1.8e-05 24.9 25.3 0.0032 17.9 4.6 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227754|ref|NP_633676.1| - 2e-05 24.8 20.3 0.0034 17.7 4.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227754|ref|NP_633676.1| - 2.6e-05 24.4 15.2 0.018 15.3 2.4 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21227754|ref|NP_633676.1| - 2.9e-05 24.3 20.6 0.0063 16.8 3.4 2.9 2 1 0 2 2 2 2 4Fe-4S single cluster domain Glycos_transf_2 PF00535.21 gi|21227756|ref|NP_633678.1| - 8e-35 120.0 0.1 3e-34 118.1 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21227756|ref|NP_633678.1| - 8.1e-29 101.0 0.0 1.3e-28 100.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21227756|ref|NP_633678.1| - 2.9e-21 76.0 0.2 7.7e-21 74.6 0.1 1.8 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 gi|21227756|ref|NP_633678.1| - 1.3e-12 47.3 0.1 5e-12 45.4 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|21227756|ref|NP_633678.1| - 3.9e-09 36.0 0.0 6.6e-09 35.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 DUF2334 PF10096.4 gi|21227756|ref|NP_633678.1| - 0.00013 21.4 0.0 0.00045 19.7 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2334) Polysacc_deac_1 PF01522.16 gi|21227756|ref|NP_633678.1| - 0.00045 19.8 0.0 0.0013 18.3 0.0 1.8 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_tranf_2_5 PF13712.1 gi|21227756|ref|NP_633678.1| - 0.0038 16.4 0.2 0.018 14.2 0.2 2.2 1 1 0 1 1 1 1 Glycosyltransferase like family Glyco_tranf_2_4 PF13704.1 gi|21227756|ref|NP_633678.1| - 0.007 16.6 0.0 0.036 14.3 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 2 TPR_14 PF13428.1 gi|21227757|ref|NP_633679.1| - 0.001 19.5 0.2 2.2 9.1 0.0 5.6 6 1 1 7 7 7 1 Tetratricopeptide repeat SWIM PF04434.12 gi|21227757|ref|NP_633679.1| - 0.0039 16.6 0.2 0.0073 15.7 0.2 1.4 1 0 0 1 1 1 1 SWIM zinc finger PUA PF01472.15 gi|21227757|ref|NP_633679.1| - 0.022 14.4 0.1 0.058 13.1 0.0 1.7 1 0 0 1 1 1 0 PUA domain Death PF00531.17 gi|21227757|ref|NP_633679.1| - 0.057 13.1 4.2 1.2 8.9 0.0 4.5 4 1 1 5 5 5 0 Death domain DUF4378 PF14309.1 gi|21227757|ref|NP_633679.1| - 0.063 13.3 2.8 2 8.4 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4378) 4HB_MCP_1 PF12729.2 gi|21227757|ref|NP_633679.1| - 0.79 9.0 7.0 0.57 9.5 2.4 2.6 2 1 1 3 3 3 0 Four helix bundle sensory module for signal transduction DAO PF01266.19 gi|21227758|ref|NP_633680.1| - 2.3e-46 158.3 0.0 3.6e-46 157.7 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Rieske PF00355.21 gi|21227758|ref|NP_633680.1| - 1.5e-16 59.6 0.3 5.5e-16 57.9 0.1 1.8 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain NAD_binding_8 PF13450.1 gi|21227758|ref|NP_633680.1| - 2.2e-07 30.8 1.1 5.7e-07 29.4 0.4 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|21227758|ref|NP_633680.1| - 6.3e-05 21.9 1.9 9.4e-05 21.4 1.3 1.4 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|21227758|ref|NP_633680.1| - 9.2e-05 22.5 0.1 0.00065 19.8 0.1 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.14 gi|21227758|ref|NP_633680.1| - 0.00028 20.0 0.0 0.00043 19.4 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|21227758|ref|NP_633680.1| - 0.00086 17.8 0.2 0.043 12.2 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|21227758|ref|NP_633680.1| - 0.0026 16.8 0.1 0.0045 16.1 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.9 gi|21227758|ref|NP_633680.1| - 0.0039 17.1 0.2 0.01 15.7 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|21227758|ref|NP_633680.1| - 0.0061 15.2 0.5 0.0093 14.6 0.4 1.3 1 0 0 1 1 1 1 Tryptophan halogenase Pyr_redox PF00070.22 gi|21227758|ref|NP_633680.1| - 0.011 16.0 0.9 0.029 14.7 0.2 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21227758|ref|NP_633680.1| - 0.029 13.3 0.1 0.13 11.1 0.1 1.8 2 0 0 2 2 2 0 Lycopene cyclase protein AlaDh_PNT_C PF01262.16 gi|21227758|ref|NP_633680.1| - 0.029 13.9 0.1 0.055 13.0 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AAA_33 PF13671.1 gi|21227759|ref|NP_633681.1| - 1e-16 61.1 0.0 2.3e-16 59.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain Metallophos PF00149.23 gi|21227759|ref|NP_633681.1| - 3.2e-08 33.2 0.0 8.4e-08 31.8 0.0 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase KTI12 PF08433.5 gi|21227759|ref|NP_633681.1| - 0.0013 17.9 0.0 0.0023 17.2 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_17 PF13207.1 gi|21227759|ref|NP_633681.1| - 0.039 14.7 0.1 0.084 13.6 0.1 1.8 1 1 0 1 1 1 0 AAA domain MCPsignal PF00015.16 gi|21227760|ref|NP_633682.1| - 2.9e-46 157.6 45.7 1.5e-45 155.3 19.6 3.3 1 1 2 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|21227760|ref|NP_633682.1| - 1.8e-23 82.8 0.1 1e-10 41.8 0.0 2.8 3 0 0 3 3 2 2 PAS domain PAS_3 PF08447.6 gi|21227760|ref|NP_633682.1| - 9.3e-18 64.1 0.0 5e-17 61.7 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_4 PF08448.5 gi|21227760|ref|NP_633682.1| - 1.1e-14 54.3 0.0 2.6e-08 33.8 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|21227760|ref|NP_633682.1| - 5.2e-13 48.7 0.0 2.2e-07 30.6 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|21227760|ref|NP_633682.1| - 0.00012 21.9 0.0 0.0071 16.2 0.0 2.7 2 0 0 2 2 2 1 PAS domain HAMP PF00672.20 gi|21227760|ref|NP_633682.1| - 0.0067 16.5 1.3 0.52 10.5 0.0 4.2 4 1 0 4 4 4 1 HAMP domain PAS_8 PF13188.1 gi|21227760|ref|NP_633682.1| - 0.014 15.2 0.0 0.18 11.7 0.0 2.5 2 0 0 2 2 2 0 PAS domain PAS_10 PF13596.1 gi|21227760|ref|NP_633682.1| - 0.06 13.6 1.9 0.94 9.7 0.0 3.4 4 0 0 4 4 4 0 PAS domain BSP PF04450.7 gi|21227760|ref|NP_633682.1| - 0.11 11.9 5.1 1.2 8.5 0.1 2.6 2 0 0 2 2 2 0 Peptidase of plants and bacteria Vps53_N PF04100.7 gi|21227760|ref|NP_633682.1| - 0.2 10.3 27.7 0.46 9.2 4.1 3.8 3 1 1 4 4 4 0 Vps53-like, N-terminal CK2S PF15011.1 gi|21227760|ref|NP_633682.1| - 0.34 10.6 8.8 0.16 11.7 0.3 3.2 2 2 1 3 3 3 0 Casein Kinase 2 substrate DUF552 PF04472.7 gi|21227760|ref|NP_633682.1| - 0.4 10.6 3.6 4.9 7.1 0.0 3.7 3 1 1 4 4 3 0 Protein of unknown function (DUF552) Spc7 PF08317.6 gi|21227760|ref|NP_633682.1| - 0.71 8.4 24.7 1.4 7.5 6.9 2.7 2 1 1 3 3 3 0 Spc7 kinetochore protein Wx5_PLAF3D7 PF09688.5 gi|21227760|ref|NP_633682.1| - 0.89 9.5 5.4 18 5.2 0.1 3.7 3 0 0 3 3 3 0 Protein of unknown function (Wx5_PLAF3D7) DUF948 PF06103.6 gi|21227760|ref|NP_633682.1| - 1.7 8.5 25.4 2.7 7.8 0.9 5.3 3 3 2 5 5 5 0 Bacterial protein of unknown function (DUF948) CorA PF01544.13 gi|21227760|ref|NP_633682.1| - 2.7 6.9 11.7 3.3 6.6 0.2 3.6 2 1 2 4 4 4 0 CorA-like Mg2+ transporter protein HisKA_3 PF07730.8 gi|21227760|ref|NP_633682.1| - 4.6 7.6 10.9 19 5.6 0.1 4.6 3 2 0 3 3 3 0 Histidine kinase Laminin_II PF06009.7 gi|21227760|ref|NP_633682.1| - 6.9 6.4 33.1 0.71 9.6 2.7 4.7 2 2 2 4 4 4 0 Laminin Domain II DUF489 PF04356.7 gi|21227760|ref|NP_633682.1| - 7 6.1 11.6 2.1 7.8 3.4 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF489) MgtE PF01769.11 gi|21227762|ref|NP_633684.1| - 2.1e-27 96.0 7.4 4.2e-27 95.0 5.2 1.5 1 0 0 1 1 1 1 Divalent cation transporter MgtE_N PF03448.12 gi|21227762|ref|NP_633684.1| - 9.5e-25 86.8 1.1 5.5e-24 84.4 0.2 2.2 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.23 gi|21227762|ref|NP_633684.1| - 2e-09 37.0 0.1 0.00035 20.3 0.1 2.6 2 0 0 2 2 2 2 CBS domain ResIII PF04851.10 gi|21227763|ref|NP_633685.1| - 6.5e-43 146.7 0.2 3.9e-42 144.1 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|21227763|ref|NP_633685.1| - 2.4e-35 121.7 1.2 2.4e-35 121.7 0.9 2.6 2 0 0 2 2 2 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|21227763|ref|NP_633685.1| - 5.6e-09 36.0 3.7 3.5e-06 26.8 0.0 3.8 2 2 1 3 3 3 2 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|21227763|ref|NP_633685.1| - 7e-09 35.4 0.0 3.4e-08 33.1 0.0 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 gi|21227763|ref|NP_633685.1| - 0.00068 18.5 0.0 0.0026 16.6 0.0 1.9 2 0 0 2 2 2 1 SNF2 family N-terminal domain Zot PF05707.7 gi|21227763|ref|NP_633685.1| - 0.007 15.8 0.2 0.45 9.9 0.1 2.6 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) FtsK_SpoIIIE PF01580.13 gi|21227763|ref|NP_633685.1| - 0.032 13.6 0.0 0.12 11.8 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family TFIIH_BTF_p62_N PF08567.6 gi|21227763|ref|NP_633685.1| - 0.066 12.8 0.0 0.15 11.7 0.0 1.6 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain AAA_18 PF13238.1 gi|21227763|ref|NP_633685.1| - 0.16 12.2 3.1 0.74 10.1 0.8 2.9 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.1 gi|21227763|ref|NP_633685.1| - 0.19 11.4 0.0 0.47 10.2 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain HTH_24 PF13412.1 gi|21227764|ref|NP_633686.1| - 4.2e-09 35.6 0.9 5.9e-09 35.1 0.6 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|21227764|ref|NP_633686.1| - 7.9e-07 28.6 0.1 1e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 HTH domain HTH_DeoR PF08220.7 gi|21227764|ref|NP_633686.1| - 0.00027 20.4 0.0 0.00034 20.1 0.0 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain MarR PF01047.17 gi|21227764|ref|NP_633686.1| - 0.00042 19.9 0.0 0.00057 19.5 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_AsnC-type PF13404.1 gi|21227764|ref|NP_633686.1| - 0.00045 19.6 0.0 0.00062 19.2 0.0 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_28 PF13518.1 gi|21227764|ref|NP_633686.1| - 0.0041 17.0 0.0 0.0052 16.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.6 gi|21227764|ref|NP_633686.1| - 0.0059 16.3 0.1 0.0091 15.7 0.1 1.2 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain MarR_2 PF12802.2 gi|21227764|ref|NP_633686.1| - 0.0072 15.9 0.0 0.0083 15.7 0.0 1.1 1 0 0 1 1 1 1 MarR family Mga PF05043.8 gi|21227764|ref|NP_633686.1| - 0.0089 16.2 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 Mga helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|21227764|ref|NP_633686.1| - 0.0096 15.4 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 LexA DNA binding domain Rrf2 PF02082.15 gi|21227764|ref|NP_633686.1| - 0.015 15.4 0.0 0.019 15.0 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator DUF746 PF05344.6 gi|21227764|ref|NP_633686.1| - 0.018 14.5 0.0 0.025 14.1 0.0 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF746) HTH_27 PF13463.1 gi|21227764|ref|NP_633686.1| - 0.02 15.2 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_10 PF04967.7 gi|21227764|ref|NP_633686.1| - 0.027 14.0 0.3 0.054 13.0 0.0 1.6 2 0 0 2 2 2 0 HTH DNA binding domain HTH_34 PF13601.1 gi|21227764|ref|NP_633686.1| - 0.027 14.4 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_23 PF13384.1 gi|21227764|ref|NP_633686.1| - 0.038 13.6 0.0 0.045 13.4 0.0 1.1 1 0 0 1 1 1 0 Homeodomain-like domain FeoC PF09012.5 gi|21227764|ref|NP_633686.1| - 0.04 13.6 0.0 0.048 13.3 0.0 1.1 1 0 0 1 1 1 0 FeoC like transcriptional regulator CheR_N PF03705.10 gi|21227765|ref|NP_633687.1| - 0.039 13.3 0.0 2.9 7.3 0.0 3.5 4 0 0 4 4 4 0 CheR methyltransferase, all-alpha domain DUF3368 PF11848.3 gi|21227766|ref|NP_633688.1| - 0.057 12.9 0.4 0.21 11.1 0.3 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3368) UPF0175 PF03683.8 gi|21227767|ref|NP_633689.1| - 6.7e-07 28.6 0.0 1.5e-06 27.5 0.0 1.7 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0175) DUF4393 PF14337.1 gi|21227767|ref|NP_633689.1| - 7e-05 22.3 1.4 0.00087 18.7 1.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4393) HTH_45 PF14947.1 gi|21227767|ref|NP_633689.1| - 0.004 16.9 0.1 0.023 14.5 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DUF4364 PF14277.1 gi|21227767|ref|NP_633689.1| - 0.0066 16.0 0.3 0.013 15.1 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) DUF2250 PF10007.4 gi|21227767|ref|NP_633689.1| - 0.031 14.1 0.0 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) SIS PF01380.17 gi|21227767|ref|NP_633689.1| - 0.034 13.7 0.1 0.063 12.8 0.0 1.4 1 0 0 1 1 1 0 SIS domain DUF1495 PF07381.6 gi|21227767|ref|NP_633689.1| - 0.13 11.9 0.8 1.1 9.0 0.0 2.4 2 1 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) SMC_N PF02463.14 gi|21227768|ref|NP_633690.1| - 5.1e-06 25.8 9.7 0.0078 15.4 1.7 2.8 2 2 1 3 3 3 2 RecF/RecN/SMC N terminal domain Miro PF08477.8 gi|21227768|ref|NP_633690.1| - 0.00049 20.5 2.5 0.084 13.3 0.0 3.9 3 0 0 3 3 3 1 Miro-like protein AAA_29 PF13555.1 gi|21227768|ref|NP_633690.1| - 0.00057 19.3 0.1 0.0014 18.0 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain PMBR PF09373.5 gi|21227768|ref|NP_633690.1| - 0.0017 18.2 1.2 0.09 12.7 0.0 3.3 3 0 0 3 3 3 1 Pseudomurein-binding repeat AAA_16 PF13191.1 gi|21227768|ref|NP_633690.1| - 0.012 15.6 0.0 0.028 14.3 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.1 gi|21227768|ref|NP_633690.1| - 0.013 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain AAA PF00004.24 gi|21227768|ref|NP_633690.1| - 0.036 14.2 2.4 1.5 9.0 0.0 4.2 4 1 0 4 4 4 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.1 gi|21227768|ref|NP_633690.1| - 0.091 12.7 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|21227768|ref|NP_633690.1| - 0.13 12.1 0.0 2.5 7.9 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_17 PF13207.1 gi|21227768|ref|NP_633690.1| - 6.9 7.5 12.3 12 6.7 4.1 4.4 3 2 0 3 3 3 0 AAA domain Methylase_S PF01420.14 gi|21227769|ref|NP_633691.1| - 1e-33 116.6 3.9 9.7e-17 61.4 0.1 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain CheZ PF04344.8 gi|21227769|ref|NP_633691.1| - 0.054 13.1 1.2 0.13 11.9 0.1 2.1 2 1 0 2 2 2 0 Chemotaxis phosphatase, CheZ DUF4558 PF15104.1 gi|21227769|ref|NP_633691.1| - 5.6 6.9 9.4 4.1 7.3 1.1 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4558) AAA_4 PF04326.9 gi|21227770|ref|NP_633692.1| - 1.8e-14 53.9 0.0 3.9e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 Divergent AAA domain HATPase_c_4 PF13749.1 gi|21227770|ref|NP_633692.1| - 0.00057 19.6 0.0 0.0016 18.1 0.0 1.8 1 0 0 1 1 1 1 ATP-dependent DNA helicase recG C-terminal HTH_5 PF01022.15 gi|21227770|ref|NP_633692.1| - 0.006 16.2 0.0 0.012 15.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family N6_Mtase PF02384.11 gi|21227771|ref|NP_633693.1| - 4.6e-69 232.8 0.0 6.8e-69 232.3 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21227771|ref|NP_633693.1| - 2.2e-14 54.0 0.2 2.5e-13 50.6 0.0 2.7 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21227771|ref|NP_633693.1| - 1.7e-10 40.9 0.0 3.3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21227771|ref|NP_633693.1| - 8.8e-05 22.1 0.0 0.00025 20.6 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.6 gi|21227771|ref|NP_633693.1| - 0.0006 20.1 0.1 0.0034 17.7 0.0 2.2 2 0 0 2 2 2 1 Eco57I restriction-modification methylase MTS PF05175.9 gi|21227771|ref|NP_633693.1| - 0.012 15.0 0.0 0.37 10.1 0.0 2.5 2 1 0 2 2 2 0 Methyltransferase small domain Pga1 PF10333.4 gi|21227772|ref|NP_633694.1| - 0.08 12.5 0.1 0.15 11.6 0.1 1.4 1 0 0 1 1 1 0 GPI-Mannosyltransferase II co-activator PocR PF10114.4 gi|21227773|ref|NP_633695.1| - 1.1e-67 226.5 0.0 4.7e-67 224.4 0.0 2.1 2 1 1 3 3 3 1 Sensory domain found in PocR HisKA_2 PF07568.7 gi|21227773|ref|NP_633695.1| - 7.1e-33 112.2 1.4 7.1e-33 112.2 1.0 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|21227773|ref|NP_633695.1| - 2.5e-29 101.2 3.6 6.4e-15 55.0 0.1 4.2 4 0 0 4 4 4 3 PAS fold PAS_9 PF13426.1 gi|21227773|ref|NP_633695.1| - 7.6e-21 74.4 2.8 2.6e-14 53.4 0.0 4.1 3 1 0 3 3 3 2 PAS domain PAS PF00989.19 gi|21227773|ref|NP_633695.1| - 9.2e-19 67.2 0.0 1e-14 54.2 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|21227773|ref|NP_633695.1| - 1.2e-17 63.9 0.0 3.5e-12 46.3 0.0 3.4 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.21 gi|21227773|ref|NP_633695.1| - 2.5e-12 46.4 0.0 5.5e-12 45.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|21227773|ref|NP_633695.1| - 1.8e-06 27.6 0.0 6.7e-06 25.7 0.0 2.0 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.9 gi|21227773|ref|NP_633695.1| - 0.0018 18.7 1.0 0.0035 17.7 0.1 1.9 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|21227773|ref|NP_633695.1| - 0.017 14.9 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF4463 PF14703.1 gi|21227773|ref|NP_633695.1| - 0.79 10.2 4.0 18 5.8 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4463) Methyltransf_11 PF08241.7 gi|21227774|ref|NP_633696.1| - 3.8e-18 65.7 0.0 6.7e-18 64.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227774|ref|NP_633696.1| - 0.00042 20.0 0.0 0.0015 18.3 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227774|ref|NP_633696.1| - 0.00099 19.4 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227774|ref|NP_633696.1| - 0.00099 18.7 0.0 0.0018 17.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21227774|ref|NP_633696.1| - 0.0013 17.8 0.0 0.0017 17.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21227774|ref|NP_633696.1| - 0.0021 18.5 0.0 0.0043 17.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|21227774|ref|NP_633696.1| - 0.073 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF268 PF03269.9 gi|21227774|ref|NP_633696.1| - 0.094 12.2 0.2 0.24 10.9 0.1 1.7 1 1 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF268 CMAS PF02353.15 gi|21227774|ref|NP_633696.1| - 0.13 11.3 0.2 0.22 10.5 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DsbC_N PF10411.4 gi|21227774|ref|NP_633696.1| - 0.16 11.2 0.0 0.28 10.4 0.0 1.4 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus Mac PF12464.3 gi|21227775|ref|NP_633697.1| - 5.6e-16 58.2 0.3 1e-15 57.4 0.2 1.4 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.19 gi|21227775|ref|NP_633697.1| - 3.6e-14 51.5 13.2 5.2e-11 41.5 4.0 3.2 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21227775|ref|NP_633697.1| - 7.2e-12 44.6 7.8 1.3e-10 40.6 2.6 2.5 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Ala_racemase_N PF01168.15 gi|21227777|ref|NP_633699.1| - 1e-41 142.9 0.0 1.2e-41 142.6 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Uteroglobin PF01099.12 gi|21227777|ref|NP_633699.1| - 0.028 14.2 0.0 0.21 11.4 0.0 2.3 2 0 0 2 2 2 0 Uteroglobin family Lactamase_B PF00753.22 gi|21227778|ref|NP_633700.1| - 1.8e-10 40.7 4.4 8.5e-10 38.6 3.1 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21227778|ref|NP_633700.1| - 0.00029 20.4 0.1 0.0005 19.6 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactonase PF10282.4 gi|21227779|ref|NP_633701.1| - 1.8e-17 63.4 9.5 7.6e-07 28.5 0.4 4.5 2 1 1 4 4 4 3 Lactonase, 7-bladed beta-propeller PKD PF00801.15 gi|21227779|ref|NP_633701.1| - 7.2e-14 51.2 4.7 4.5e-13 48.7 3.2 2.5 1 0 0 1 1 1 1 PKD domain Cytochrom_D1 PF02239.11 gi|21227779|ref|NP_633701.1| - 7.1e-12 44.3 9.7 4e-06 25.3 0.2 4.0 2 2 1 3 3 3 3 Cytochrome D1 heme domain Inhibitor_I42 PF09394.5 gi|21227779|ref|NP_633701.1| - 1.2e-10 41.5 0.1 5.5e-10 39.4 0.0 2.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 NHL PF01436.16 gi|21227779|ref|NP_633701.1| - 9.1e-10 37.9 20.5 0.33 10.9 0.0 6.9 6 0 0 6 6 6 5 NHL repeat PD40 PF07676.7 gi|21227779|ref|NP_633701.1| - 2.3e-05 23.9 16.0 3.7 7.3 0.0 8.8 9 1 0 9 9 9 1 WD40-like Beta Propeller Repeat Kelch_4 PF13418.1 gi|21227779|ref|NP_633701.1| - 0.00023 20.8 3.9 0.34 10.7 0.0 6.2 7 0 0 7 7 7 1 Galactose oxidase, central domain Arylesterase PF01731.15 gi|21227779|ref|NP_633701.1| - 0.00051 19.9 21.7 1.1 9.2 0.0 7.5 3 2 5 8 8 8 2 Arylesterase DUF4102 PF13356.1 gi|21227779|ref|NP_633701.1| - 0.0013 18.6 0.0 6.8 6.6 0.0 4.6 1 1 2 3 3 3 1 Domain of unknown function (DUF4102) Peptidase_S68 PF10461.4 gi|21227779|ref|NP_633701.1| - 0.04 13.6 0.0 0.069 12.8 0.0 1.4 1 0 0 1 1 1 0 Peptidase S68 DUF295 PF03478.13 gi|21227779|ref|NP_633701.1| - 0.36 10.2 8.8 4.8 6.6 0.0 4.6 6 0 0 6 6 6 0 Protein of unknown function (DUF295) Arc_PepC_II PF06847.6 gi|21227780|ref|NP_633702.1| - 1e-30 105.9 0.2 2.8e-30 104.6 0.0 1.7 2 0 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.13 gi|21227780|ref|NP_633702.1| - 5.5e-16 58.6 9.0 5.5e-16 58.6 6.2 2.3 2 1 1 3 3 3 1 Type IV leader peptidase family DUF1056 PF06341.6 gi|21227780|ref|NP_633702.1| - 1.1 9.3 8.6 0.26 11.3 1.8 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1056) Transposase_20 PF02371.11 gi|21227781|ref|NP_633703.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21227781|ref|NP_633703.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21227781|ref|NP_633703.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein TP_methylase PF00590.15 gi|21227782|ref|NP_633704.1| - 4.8e-27 95.0 0.0 1.1e-26 93.8 0.0 1.5 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.12 gi|21227783|ref|NP_633705.1| - 7.7e-53 179.1 1.4 1.2e-52 178.5 1.0 1.3 1 0 0 1 1 1 1 CbiD DNA_mis_repair PF01119.14 gi|21227784|ref|NP_633706.1| - 6e-39 132.1 0.0 1.2e-38 131.2 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.6 gi|21227784|ref|NP_633706.1| - 2.3e-37 127.7 0.0 5.3e-37 126.6 0.0 1.6 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.1 gi|21227784|ref|NP_633706.1| - 9.4e-15 54.4 0.1 9.4e-15 54.4 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|21227784|ref|NP_633706.1| - 9e-11 41.4 0.2 2.6e-10 39.9 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSG_B PF13206.1 gi|21227784|ref|NP_633706.1| - 0.19 10.8 4.6 0.31 10.0 3.2 1.2 1 0 0 1 1 1 0 Trypanosomal VSG domain Ycf1 PF05758.7 gi|21227784|ref|NP_633706.1| - 3.4 5.2 8.1 4.6 4.8 5.6 1.1 1 0 0 1 1 1 0 Ycf1 MutS_V PF00488.16 gi|21227785|ref|NP_633707.1| - 7e-101 336.5 0.0 1.3e-100 335.6 0.0 1.5 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.13 gi|21227785|ref|NP_633707.1| - 2.6e-48 164.5 0.8 4.4e-48 163.7 0.2 1.7 2 0 0 2 2 2 1 MutS domain III MutS_I PF01624.15 gi|21227785|ref|NP_633707.1| - 5.9e-45 151.9 0.0 2.1e-44 150.1 0.0 1.9 2 0 0 2 2 2 1 MutS domain I MutS_IV PF05190.13 gi|21227785|ref|NP_633707.1| - 5.3e-32 109.8 0.4 1.8e-31 108.1 0.3 2.0 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.12 gi|21227785|ref|NP_633707.1| - 8.9e-23 80.8 0.0 3.9e-22 78.8 0.0 2.2 2 0 0 2 2 2 1 MutS domain II AAA_29 PF13555.1 gi|21227785|ref|NP_633707.1| - 0.0078 15.7 0.0 0.018 14.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rotamase_2 PF13145.1 gi|21227785|ref|NP_633707.1| - 0.076 13.6 0.2 6.8 7.3 0.2 2.9 3 0 0 3 3 3 0 PPIC-type PPIASE domain TLV_coat PF00429.14 gi|21227785|ref|NP_633707.1| - 0.23 9.8 0.0 0.33 9.3 0.0 1.1 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) Acyl_transf_3 PF01757.17 gi|21227786|ref|NP_633708.1| - 2.8e-25 88.8 34.9 4.8e-25 88.1 24.2 1.4 1 1 0 1 1 1 1 Acyltransferase family SCFA_trans PF02667.9 gi|21227786|ref|NP_633708.1| - 0.023 13.4 6.6 0.12 11.0 1.6 2.2 2 0 0 2 2 2 0 Short chain fatty acid transporter CDP-OH_P_transf PF01066.16 gi|21227787|ref|NP_633709.1| - 8.3e-12 45.2 4.2 1.7e-11 44.3 2.9 1.6 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase GerA PF03323.8 gi|21227787|ref|NP_633709.1| - 0.28 9.2 1.2 0.37 8.8 0.8 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein CCG PF02754.11 gi|21227788|ref|NP_633710.1| - 2.1e-30 104.5 4.9 1.5e-14 53.7 0.1 2.4 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.1 gi|21227788|ref|NP_633710.1| - 3.2e-08 33.2 3.5 3.2e-08 33.2 2.5 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227788|ref|NP_633710.1| - 1.6e-07 31.2 4.8 1.6e-07 31.2 3.3 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227788|ref|NP_633710.1| - 4.8e-06 26.8 11.9 5.9e-06 26.5 4.8 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227788|ref|NP_633710.1| - 5e-05 23.4 14.7 0.029 14.6 1.7 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227788|ref|NP_633710.1| - 0.0004 20.1 9.0 0.0014 18.4 0.6 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227788|ref|NP_633710.1| - 0.00042 20.0 1.5 0.00042 20.0 1.0 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.22 gi|21227788|ref|NP_633710.1| - 0.00043 19.7 12.1 0.0035 16.8 2.2 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21227788|ref|NP_633710.1| - 0.0027 17.9 10.4 0.008 16.4 0.7 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227788|ref|NP_633710.1| - 0.0028 18.0 15.1 0.018 15.4 0.1 3.7 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21227788|ref|NP_633710.1| - 0.0028 18.0 5.3 0.38 11.1 0.1 3.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_7 PF12838.2 gi|21227788|ref|NP_633710.1| - 0.005 17.1 12.4 0.005 17.1 8.6 3.5 3 1 2 5 5 5 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227788|ref|NP_633710.1| - 0.005 17.5 13.0 0.021 15.5 0.1 3.3 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|21227788|ref|NP_633710.1| - 0.015 15.8 7.1 1.3 9.6 0.5 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21227788|ref|NP_633710.1| - 0.2 12.2 29.2 0.25 12.0 2.3 4.7 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227788|ref|NP_633710.1| - 1.5 8.7 20.8 0.054 13.3 7.5 3.3 3 1 0 3 3 3 0 4Fe-4S dicluster domain B12-binding PF02310.14 gi|21227789|ref|NP_633711.1| - 3e-26 91.6 0.2 4.3e-26 91.1 0.1 1.2 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21227789|ref|NP_633711.1| - 1.6e-09 37.6 0.1 3.3e-09 36.6 0.0 1.6 1 0 0 1 1 1 1 B12 binding domain SpoVAD PF07451.6 gi|21227789|ref|NP_633711.1| - 0.036 12.5 0.1 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) MTTB PF06253.6 gi|21227790|ref|NP_633712.1| - 1.3e-55 188.1 0.0 1.6e-55 187.8 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.6 gi|21227791|ref|NP_633713.1| - 3.8e-24 84.3 0.0 4.4e-24 84.1 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B12-binding PF02310.14 gi|21227792|ref|NP_633714.1| - 6.1e-22 77.7 0.3 1.2e-21 76.7 0.2 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21227792|ref|NP_633714.1| - 2.6e-18 65.8 0.8 2.6e-18 65.8 0.6 2.0 3 0 0 3 3 3 1 B12 binding domain SpoVAD PF07451.6 gi|21227792|ref|NP_633714.1| - 0.028 12.8 0.1 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) EamA PF00892.15 gi|21227793|ref|NP_633715.1| - 7.7e-11 42.1 45.5 1.9e-07 31.1 9.3 3.7 4 2 1 5 5 5 2 EamA-like transporter family EmrE PF13536.1 gi|21227793|ref|NP_633715.1| - 2.1e-10 40.7 9.9 2.1e-10 40.7 6.9 3.6 3 1 0 3 3 3 2 Multidrug resistance efflux transporter DUF1440 PF07274.7 gi|21227793|ref|NP_633715.1| - 5.2 7.0 8.4 1.1 9.2 1.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1440) SepZ PF06066.6 gi|21227793|ref|NP_633715.1| - 7 6.7 9.3 9.8 6.2 1.6 3.0 2 2 1 3 3 3 0 SepZ Dimeth_Pyl PF09505.5 gi|21227795|ref|NP_633717.1| - 2.4e-243 807.5 6.2 2.7e-243 807.3 4.3 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) XFP_C PF09363.5 gi|21227795|ref|NP_633717.1| - 0.0035 16.7 0.2 0.0056 16.1 0.1 1.2 1 0 0 1 1 1 1 XFP C-terminal domain Dimeth_Pyl PF09505.5 gi|21227796|ref|NP_633718.1| - 7.5e-62 209.1 2.1 8.3e-62 208.9 1.5 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) PPP5 PF08321.7 gi|21227796|ref|NP_633718.1| - 0.03 14.3 0.5 0.035 14.0 0.3 1.3 1 1 0 1 1 1 0 PPP5 TPR repeat region PepSY PF03413.14 gi|21227797|ref|NP_633719.1| - 4.2e-21 75.3 6.3 4.2e-10 40.1 0.2 2.3 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain PepSY_2 PF13670.1 gi|21227797|ref|NP_633719.1| - 0.0024 17.7 3.8 0.42 10.5 0.5 3.2 2 2 1 3 3 3 2 Peptidase propeptide and YPEB domain Myco_19_kDa PF05481.7 gi|21227797|ref|NP_633719.1| - 0.057 13.2 0.3 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 Mycobacterium 19 kDa lipoprotein antigen DUF2874 PF11396.3 gi|21227797|ref|NP_633719.1| - 1 9.3 3.7 1.1 9.2 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2874) tRNA-synt_1f PF01921.13 gi|21227798|ref|NP_633720.1| - 9.4e-139 462.0 0.0 1.2e-138 461.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|21227798|ref|NP_633720.1| - 6.2e-09 34.9 0.1 0.00034 19.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|21227798|ref|NP_633720.1| - 1.4e-05 24.3 0.0 0.14 11.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.20 gi|21227798|ref|NP_633720.1| - 0.12 11.5 0.0 4.2 6.3 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Methyltransf_11 PF08241.7 gi|21227799|ref|NP_633721.1| - 1.1e-15 57.8 0.0 1.8e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227799|ref|NP_633721.1| - 7.4e-14 51.7 0.0 9.6e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21227799|ref|NP_633721.1| - 1.2e-10 41.6 0.0 2.5e-10 40.6 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227799|ref|NP_633721.1| - 4.4e-08 33.4 0.0 8e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227799|ref|NP_633721.1| - 5.2e-07 29.3 0.0 7.1e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227799|ref|NP_633721.1| - 1.5e-06 28.7 0.0 2.2e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21227799|ref|NP_633721.1| - 0.00046 19.3 0.0 0.0011 18.1 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_26 PF13659.1 gi|21227799|ref|NP_633721.1| - 0.00065 19.7 0.0 0.0011 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21227799|ref|NP_633721.1| - 0.096 12.0 0.0 0.14 11.5 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW BofA PF07441.6 gi|21227800|ref|NP_633722.1| - 1.1e-07 31.6 12.9 1.3e-07 31.4 9.0 1.1 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA ABC2_membrane PF01061.19 gi|21227800|ref|NP_633722.1| - 0.49 9.5 10.2 0.51 9.4 7.0 1.0 1 0 0 1 1 1 0 ABC-2 type transporter Herpes_US9 PF06072.6 gi|21227800|ref|NP_633722.1| - 9.1 6.1 10.7 1.6 8.5 3.9 1.9 1 1 1 2 2 2 0 Alphaherpesvirus tegument protein US9 Nuc_deoxyrib_tr PF05014.10 gi|21227801|ref|NP_633723.1| - 8.2e-10 38.5 0.0 1e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase DUF849 PF05853.7 gi|21227801|ref|NP_633723.1| - 0.088 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic protein of unknown function (DUF849) Peptidase_U32 PF01136.14 gi|21227802|ref|NP_633724.1| - 3.9e-125 415.3 0.0 2.3e-81 272.1 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|21227802|ref|NP_633724.1| - 2e-34 118.2 0.2 2.4e-33 114.8 0.2 2.3 2 0 0 2 2 2 1 Collagenase Dus PF01207.12 gi|21227802|ref|NP_633724.1| - 0.028 13.2 0.0 8.5 5.0 0.0 3.5 4 0 0 4 4 4 0 Dihydrouridine synthase (Dus) NmrA PF05368.8 gi|21227803|ref|NP_633725.1| - 2e-15 56.6 0.0 3.3e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.1 gi|21227803|ref|NP_633725.1| - 6.6e-15 55.5 0.0 2.4e-14 53.7 0.0 1.8 2 0 0 2 2 2 1 NADH(P)-binding Epimerase PF01370.16 gi|21227803|ref|NP_633725.1| - 6.2e-08 32.3 0.0 1.1e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family TrkA_N PF02254.13 gi|21227803|ref|NP_633725.1| - 1.3e-05 25.1 0.0 2.3e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain 3Beta_HSD PF01073.14 gi|21227803|ref|NP_633725.1| - 0.0058 15.3 0.0 0.0083 14.8 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DUF3753 PF12575.3 gi|21227803|ref|NP_633725.1| - 0.028 14.1 0.0 0.084 12.6 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3753) ApbA PF02558.11 gi|21227803|ref|NP_633725.1| - 0.054 12.9 0.0 0.088 12.2 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA RmlD_sub_bind PF04321.12 gi|21227803|ref|NP_633725.1| - 0.057 12.2 0.0 0.74 8.6 0.1 2.1 2 0 0 2 2 2 0 RmlD substrate binding domain MazG PF03819.12 gi|21227805|ref|NP_633727.1| - 2.3e-17 62.7 0.0 2.8e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.12 gi|21227805|ref|NP_633727.1| - 0.00017 21.7 0.2 0.00019 21.6 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase His_biosynth PF00977.16 gi|21227806|ref|NP_633728.1| - 7.5e-89 296.9 0.3 8.7e-89 296.7 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|21227806|ref|NP_633728.1| - 1.7e-05 23.9 0.2 0.096 11.7 0.0 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.10 gi|21227806|ref|NP_633728.1| - 0.00012 21.3 0.6 0.16 11.1 0.1 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.12 gi|21227806|ref|NP_633728.1| - 0.00013 20.9 0.0 0.0025 16.7 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|21227806|ref|NP_633728.1| - 0.00013 21.3 0.2 0.00041 19.6 0.1 1.9 2 1 0 2 2 2 1 PcrB family TMP-TENI PF02581.12 gi|21227806|ref|NP_633728.1| - 0.00027 20.1 0.1 0.2 10.7 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI DHO_dh PF01180.16 gi|21227806|ref|NP_633728.1| - 0.00034 19.6 0.1 0.41 9.5 0.0 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase IMPDH PF00478.20 gi|21227806|ref|NP_633728.1| - 0.0007 18.5 0.5 0.27 10.0 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain SBP_bac_3 PF00497.15 gi|21227806|ref|NP_633728.1| - 0.065 12.4 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 G3P_antiterm PF04309.7 gi|21227806|ref|NP_633728.1| - 0.098 11.6 0.2 0.63 9.0 0.1 2.0 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DNase-RNase PF02577.9 gi|21227807|ref|NP_633729.1| - 2.9e-40 136.6 0.1 3.5e-40 136.3 0.1 1.1 1 0 0 1 1 1 1 Bifunctional nuclease PCMT PF01135.14 gi|21227808|ref|NP_633730.1| - 1.8e-71 240.0 0.1 2.2e-71 239.7 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.1 gi|21227808|ref|NP_633730.1| - 1e-09 38.1 0.0 1.7e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227808|ref|NP_633730.1| - 3.1e-08 34.1 0.0 1.6e-07 31.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain GCD14 PF08704.5 gi|21227808|ref|NP_633730.1| - 1.2e-07 31.5 0.0 2.1e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.12 gi|21227808|ref|NP_633730.1| - 9.9e-06 24.6 0.0 1.8e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Fibrillarin Ubie_methyltran PF01209.13 gi|21227808|ref|NP_633730.1| - 1e-05 24.7 0.0 1.6e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.12 gi|21227808|ref|NP_633730.1| - 1.1e-05 24.5 0.0 9.3e-05 21.5 0.0 2.0 2 0 0 2 2 2 1 O-methyltransferase Methyltransf_26 PF13659.1 gi|21227808|ref|NP_633730.1| - 8e-05 22.6 0.0 0.00043 20.3 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|21227808|ref|NP_633730.1| - 0.00028 20.3 0.0 0.00045 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.1 gi|21227808|ref|NP_633730.1| - 0.00037 20.2 0.0 0.0011 18.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21227808|ref|NP_633730.1| - 0.00042 19.4 0.0 0.00059 18.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|21227808|ref|NP_633730.1| - 0.0047 17.7 0.0 0.043 14.6 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227808|ref|NP_633730.1| - 0.019 15.4 0.1 0.095 13.2 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.15 gi|21227808|ref|NP_633730.1| - 0.038 13.0 0.0 0.055 12.5 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ACP_syn_III_C PF08541.5 gi|21227808|ref|NP_633730.1| - 0.11 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Methyltransf_28 PF02636.12 gi|21227808|ref|NP_633730.1| - 0.11 11.9 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF2387 PF09526.5 gi|21227809|ref|NP_633731.1| - 0.0018 18.1 1.0 0.0044 16.9 0.7 1.7 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) DUF4625 PF15418.1 gi|21227809|ref|NP_633731.1| - 0.028 14.5 0.1 0.047 13.8 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4625) zinc_ribbon_5 PF13719.1 gi|21227809|ref|NP_633731.1| - 0.04 13.5 0.5 0.089 12.3 0.3 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21227809|ref|NP_633731.1| - 0.061 13.0 0.6 0.14 11.8 0.4 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1 PF03811.8 gi|21227809|ref|NP_633731.1| - 0.096 12.2 1.8 0.28 10.6 1.3 1.9 1 1 0 1 1 1 0 InsA N-terminal domain Cupredoxin_1 PF13473.1 gi|21227809|ref|NP_633731.1| - 0.19 11.6 1.8 5.5 6.9 0.2 2.4 1 1 1 2 2 2 0 Cupredoxin-like domain CTP-dep_RFKase PF01982.11 gi|21227811|ref|NP_633733.1| - 1.2e-46 157.2 0.0 1.7e-46 156.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HxlR PF01638.12 gi|21227811|ref|NP_633733.1| - 0.078 12.6 0.3 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 HxlR-like helix-turn-helix DHBP_synthase PF00926.14 gi|21227812|ref|NP_633734.1| - 2.7e-67 225.7 0.0 3.1e-67 225.5 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase Cation_efflux PF01545.16 gi|21227813|ref|NP_633735.1| - 2.5e-58 197.4 8.4 2.9e-58 197.1 5.8 1.0 1 0 0 1 1 1 1 Cation efflux family Intg_mem_TP0381 PF09529.5 gi|21227813|ref|NP_633735.1| - 0.34 10.1 5.4 0.24 10.6 0.1 2.3 2 1 0 2 2 2 0 Integral membrane protein (intg_mem_TP0381) Chorismate_synt PF01264.16 gi|21227814|ref|NP_633736.1| - 1.8e-153 510.0 0.1 2.1e-153 509.8 0.1 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3160 PF11369.3 gi|21227815|ref|NP_633737.1| - 6e-286 949.8 6.8 6.9e-286 949.6 4.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) DUF1724 PF08350.5 gi|21227818|ref|NP_633740.1| - 2e-22 78.4 1.7 5.2e-22 77.1 0.3 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HxlR PF01638.12 gi|21227818|ref|NP_633740.1| - 0.00099 18.7 0.0 0.0024 17.4 0.0 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|21227818|ref|NP_633740.1| - 0.022 15.0 0.1 0.046 14.0 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF4367 PF14285.1 gi|21227819|ref|NP_633741.1| - 4.4e-10 39.1 9.9 4.4e-10 39.1 6.9 2.7 2 1 1 3 3 3 1 Domain of unknown function (DUF4367) DUF1329 PF07044.6 gi|21227819|ref|NP_633741.1| - 0.0021 17.0 0.0 0.0034 16.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1329) DUF2092 PF09865.4 gi|21227819|ref|NP_633741.1| - 0.004 16.2 0.1 0.26 10.3 0.0 2.2 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) DUF4412 PF14371.1 gi|21227819|ref|NP_633741.1| - 0.0066 16.9 0.0 0.02 15.3 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4412) DUF1571 PF07608.6 gi|21227819|ref|NP_633741.1| - 0.0076 15.3 0.0 0.017 14.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1571) MucB_RseB PF03888.9 gi|21227819|ref|NP_633741.1| - 0.018 14.0 0.0 0.084 11.8 0.0 2.0 2 0 0 2 2 2 0 MucB/RseB family Brevenin PF03032.10 gi|21227819|ref|NP_633741.1| - 0.21 11.4 0.2 0.21 11.4 0.1 1.7 2 0 0 2 2 2 0 Brevenin/esculentin/gaegurin/rugosin family hSH3 PF14603.1 gi|21227820|ref|NP_633742.1| - 0.066 13.2 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Helically-extended SH3 domain Med17 PF10156.4 gi|21227821|ref|NP_633743.1| - 0.064 11.5 0.0 0.072 11.3 0.0 1.3 1 1 0 1 1 1 0 Subunit 17 of Mediator complex DUF1724 PF08350.5 gi|21227823|ref|NP_633745.1| - 6.3e-22 76.8 2.4 9.1e-22 76.3 0.3 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF1724) HxlR PF01638.12 gi|21227823|ref|NP_633745.1| - 0.00045 19.7 0.1 0.0015 18.1 0.0 1.8 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|21227823|ref|NP_633745.1| - 0.00047 20.4 0.1 0.0011 19.2 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HemN_C PF06969.11 gi|21227823|ref|NP_633745.1| - 0.011 15.7 0.1 0.043 13.8 0.0 2.1 2 0 0 2 2 2 0 HemN C-terminal domain HTH_5 PF01022.15 gi|21227823|ref|NP_633745.1| - 0.49 10.1 2.2 0.41 10.3 0.2 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Peptidase_C3 PF00548.15 gi|21227824|ref|NP_633746.1| - 0.5 10.1 2.8 0.96 9.2 2.0 1.4 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Radical_SAM PF04055.16 gi|21227828|ref|NP_633750.1| - 1.8e-23 83.5 0.1 5.7e-23 81.9 0.0 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21227828|ref|NP_633750.1| - 2.1e-09 37.6 0.0 4.4e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227828|ref|NP_633750.1| - 2.8e-08 33.8 0.0 8.8e-08 32.1 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|21227828|ref|NP_633750.1| - 1.2e-06 28.7 1.1 2.5e-06 27.7 0.8 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain AP_endonuc_2 PF01261.19 gi|21227828|ref|NP_633750.1| - 0.016 14.5 0.0 0.042 13.1 0.0 1.7 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel PARG_cat PF05028.9 gi|21227828|ref|NP_633750.1| - 0.029 13.5 0.0 0.04 13.1 0.0 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Arif-1 PF06770.6 gi|21227828|ref|NP_633750.1| - 0.031 13.6 0.4 0.071 12.4 0.0 1.7 2 0 0 2 2 2 0 Actin-rearrangement-inducing factor (Arif-1) Hydrolase_6 PF13344.1 gi|21227828|ref|NP_633750.1| - 0.13 12.1 0.0 5.6 6.9 0.0 2.8 2 1 1 3 3 3 0 Haloacid dehalogenase-like hydrolase HTH_AsnC-type PF13404.1 gi|21227829|ref|NP_633751.1| - 4.6e-07 29.2 0.1 1.1e-06 28.0 0.0 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|21227829|ref|NP_633751.1| - 0.012 14.9 3.7 0.043 13.2 0.8 2.7 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding CoA_binding_3 PF13727.1 gi|21227829|ref|NP_633751.1| - 0.094 12.5 0.0 12 5.6 0.0 2.1 2 0 0 2 2 2 0 CoA-binding domain HTH_20 PF12840.2 gi|21227829|ref|NP_633751.1| - 0.14 12.0 0.1 0.3 10.9 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|21227830|ref|NP_633752.1| - 2.8e-05 23.5 0.0 6.1e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|21227830|ref|NP_633752.1| - 0.0025 17.1 0.3 0.29 10.5 0.0 2.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 gi|21227830|ref|NP_633752.1| - 0.012 15.3 0.1 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 AsnC family DegV PF02645.11 gi|21227830|ref|NP_633752.1| - 0.018 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.4 gi|21227830|ref|NP_633752.1| - 0.055 12.8 0.0 0.092 12.1 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain Aldo_ket_red PF00248.16 gi|21227830|ref|NP_633752.1| - 0.062 12.1 0.0 0.074 11.8 0.0 1.3 1 1 0 1 1 1 0 Aldo/keto reductase family FaeA PF04703.7 gi|21227830|ref|NP_633752.1| - 0.076 13.1 0.0 0.51 10.5 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein Picorna_P3A PF06363.6 gi|21227830|ref|NP_633752.1| - 0.092 12.7 0.0 1.8 8.6 0.0 2.2 2 0 0 2 2 2 0 Picornaviridae P3A protein IF2_N PF04760.10 gi|21227830|ref|NP_633752.1| - 0.12 12.0 0.3 0.42 10.2 0.0 2.2 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region Y1_Tnp PF01797.11 gi|21227831|ref|NP_633753.1| - 2.5e-40 137.1 0.7 2.8e-40 136.9 0.5 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.4 gi|21227831|ref|NP_633753.1| - 0.0049 16.1 0.1 0.24 10.6 0.0 2.1 2 0 0 2 2 2 2 Conserved mid region of cactin OrfB_IS605 PF01385.14 gi|21227832|ref|NP_633754.1| - 2.9e-44 151.1 0.1 5.2e-44 150.3 0.1 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|21227832|ref|NP_633754.1| - 1.4e-26 91.8 0.5 2.7e-26 91.0 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.3 gi|21227832|ref|NP_633754.1| - 8.3e-16 57.0 1.9 1.7e-15 56.0 1.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.1 gi|21227832|ref|NP_633754.1| - 0.0043 16.6 1.0 0.0078 15.8 0.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 gi|21227832|ref|NP_633754.1| - 0.046 13.5 1.0 0.097 12.5 0.7 1.5 1 0 0 1 1 1 0 Double zinc ribbon DUF1724 PF08350.5 gi|21227834|ref|NP_633756.1| - 2.3e-22 78.2 1.2 9.1e-22 76.3 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.12 gi|21227834|ref|NP_633756.1| - 0.0026 17.3 0.2 0.0081 15.7 0.1 1.8 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.15 gi|21227834|ref|NP_633756.1| - 0.58 9.8 2.3 0.46 10.1 0.2 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Peptidase_M10 PF00413.19 gi|21227835|ref|NP_633757.1| - 4.6e-15 55.6 0.1 6.6e-15 55.1 0.1 1.4 1 1 0 1 1 1 1 Matrixin Peptidase_M43 PF05572.8 gi|21227835|ref|NP_633757.1| - 0.0057 16.2 1.4 0.0057 16.2 1.0 1.7 1 1 1 2 2 2 1 Pregnancy-associated plasma protein-A Reprolysin_3 PF13582.1 gi|21227835|ref|NP_633757.1| - 0.017 15.6 0.3 0.025 15.1 0.2 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.1 gi|21227835|ref|NP_633757.1| - 0.049 13.6 1.2 0.059 13.4 0.8 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF3988 PF13149.1 gi|21227836|ref|NP_633758.1| - 0.023 14.2 0.2 0.033 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3988) AIP3 PF03915.8 gi|21227836|ref|NP_633758.1| - 0.13 11.1 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 SlyX PF04102.7 gi|21227837|ref|NP_633759.1| - 0.0036 17.6 0.1 0.0052 17.1 0.1 1.2 1 0 0 1 1 1 1 SlyX DASH_Spc34 PF08657.5 gi|21227837|ref|NP_633759.1| - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 Tantalus PF15386.1 gi|21227837|ref|NP_633759.1| - 5.2 6.9 5.7 13 5.5 4.0 1.9 1 1 0 1 1 1 0 Drosophila Tantalus-like DDE_Tnp_IS66 PF03050.9 gi|21227838|ref|NP_633760.1| - 2e-71 240.3 0.0 2.4e-71 240.1 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21227838|ref|NP_633760.1| - 1.2e-09 38.0 3.6 3.2e-09 36.6 2.5 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21227838|ref|NP_633760.1| - 7e-06 26.0 1.7 0.017 15.0 0.1 3.1 3 0 0 3 3 3 2 DDE domain p31comet PF06581.7 gi|21227838|ref|NP_633760.1| - 0.017 14.0 0.2 0.029 13.2 0.1 1.3 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding Apolipoprotein PF01442.13 gi|21227838|ref|NP_633760.1| - 0.022 14.3 0.4 0.037 13.5 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain zf-ribbon_3 PF13248.1 gi|21227838|ref|NP_633760.1| - 0.12 11.5 4.6 0.29 10.3 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|21227838|ref|NP_633760.1| - 0.15 11.8 3.2 0.34 10.7 1.5 2.3 2 1 0 2 2 1 0 Double zinc ribbon Takusan PF04822.8 gi|21227838|ref|NP_633760.1| - 0.17 11.6 2.8 0.18 11.6 0.9 1.8 1 1 0 1 1 1 0 Takusan zf-RING_5 PF14634.1 gi|21227838|ref|NP_633760.1| - 0.17 11.6 5.7 1.4 8.7 0.0 3.1 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21227838|ref|NP_633760.1| - 0.26 10.8 6.5 1 8.9 0.1 2.8 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC4_3 PF13920.1 gi|21227838|ref|NP_633760.1| - 3.5 7.3 6.5 2.9 7.6 1.3 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Radical_SAM PF04055.16 gi|21227839|ref|NP_633761.1| - 1e-23 84.3 0.2 4e-23 82.4 0.0 2.1 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21227839|ref|NP_633761.1| - 1.2e-09 38.3 0.0 2.5e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227839|ref|NP_633761.1| - 1.5e-08 34.6 0.0 3.8e-08 33.3 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|21227839|ref|NP_633761.1| - 3.8e-07 30.3 1.0 7.7e-07 29.3 0.7 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain AP_endonuc_2 PF01261.19 gi|21227839|ref|NP_633761.1| - 0.029 13.6 0.0 0.34 10.1 0.0 2.2 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Arif-1 PF06770.6 gi|21227839|ref|NP_633761.1| - 0.03 13.6 1.2 0.033 13.5 0.0 1.6 2 0 0 2 2 2 0 Actin-rearrangement-inducing factor (Arif-1) PARG_cat PF05028.9 gi|21227839|ref|NP_633761.1| - 0.12 11.6 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) HTH_AsnC-type PF13404.1 gi|21227840|ref|NP_633762.1| - 1.6e-09 37.1 0.0 3.1e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|21227840|ref|NP_633762.1| - 0.00057 19.2 2.8 0.0052 16.1 1.9 2.2 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.11 gi|21227840|ref|NP_633762.1| - 0.026 14.0 0.2 0.059 12.9 0.2 1.6 1 1 0 1 1 1 0 LexA DNA binding domain TrmB PF01978.14 gi|21227840|ref|NP_633762.1| - 0.034 13.8 0.2 0.096 12.4 0.1 1.8 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|21227840|ref|NP_633762.1| - 0.066 13.0 0.1 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|21227841|ref|NP_633763.1| - 2.8e-05 23.5 0.0 6.1e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|21227841|ref|NP_633763.1| - 0.0025 17.1 0.3 0.29 10.5 0.0 2.5 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.16 gi|21227841|ref|NP_633763.1| - 0.012 15.3 0.1 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 AsnC family DegV PF02645.11 gi|21227841|ref|NP_633763.1| - 0.018 14.1 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.4 gi|21227841|ref|NP_633763.1| - 0.055 12.8 0.0 0.092 12.1 0.0 1.3 1 0 0 1 1 1 0 DDRGK domain Aldo_ket_red PF00248.16 gi|21227841|ref|NP_633763.1| - 0.062 12.1 0.0 0.074 11.8 0.0 1.3 1 1 0 1 1 1 0 Aldo/keto reductase family FaeA PF04703.7 gi|21227841|ref|NP_633763.1| - 0.076 13.1 0.0 0.51 10.5 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein Picorna_P3A PF06363.6 gi|21227841|ref|NP_633763.1| - 0.092 12.7 0.0 1.8 8.6 0.0 2.2 2 0 0 2 2 2 0 Picornaviridae P3A protein IF2_N PF04760.10 gi|21227841|ref|NP_633763.1| - 0.12 12.0 0.3 0.42 10.2 0.0 2.2 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region NAD_binding_7 PF13241.1 gi|21227842|ref|NP_633764.1| - 5.7e-19 68.2 0.0 1e-18 67.4 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Saccharop_dh PF03435.13 gi|21227842|ref|NP_633764.1| - 0.0013 17.7 0.0 0.034 13.1 0.0 2.0 1 1 1 2 2 2 2 Saccharopine dehydrogenase TrkA_N PF02254.13 gi|21227842|ref|NP_633764.1| - 0.016 15.1 0.1 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain GlutR_N PF05201.10 gi|21227843|ref|NP_633765.1| - 3.1e-40 137.2 0.0 6.2e-40 136.2 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.15 gi|21227843|ref|NP_633765.1| - 9e-39 132.6 0.2 2e-38 131.5 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.15 gi|21227843|ref|NP_633765.1| - 1.9e-23 82.3 0.5 4.2e-23 81.1 0.4 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.12 gi|21227843|ref|NP_633765.1| - 4.6e-06 26.9 0.1 1.5e-05 25.3 0.1 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh PF03435.13 gi|21227843|ref|NP_633765.1| - 5e-06 25.7 0.2 8e-06 25.0 0.2 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase 2-Hacid_dh_C PF02826.14 gi|21227843|ref|NP_633765.1| - 8e-06 25.1 0.1 1.5e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_10 PF13460.1 gi|21227843|ref|NP_633765.1| - 4.3e-05 23.6 0.4 9.4e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 NADH(P)-binding NAD_binding_7 PF13241.1 gi|21227843|ref|NP_633765.1| - 6.7e-05 23.0 0.1 0.00028 21.0 0.0 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding CPSase_L_chain PF00289.17 gi|21227843|ref|NP_633765.1| - 0.0024 17.9 0.1 0.0051 16.9 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, N-terminal domain NAD_binding_2 PF03446.10 gi|21227843|ref|NP_633765.1| - 0.0034 17.2 0.0 0.0082 15.9 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase THF_DHG_CYH_C PF02882.14 gi|21227843|ref|NP_633765.1| - 0.0053 15.8 0.1 2.5 7.1 0.0 2.8 3 0 0 3 3 3 2 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ThiF PF00899.16 gi|21227843|ref|NP_633765.1| - 0.025 14.3 2.8 0.032 14.0 0.2 2.5 2 2 1 3 3 3 0 ThiF family TrkA_N PF02254.13 gi|21227843|ref|NP_633765.1| - 0.036 14.0 2.3 0.046 13.7 0.2 2.3 2 0 0 2 2 2 0 TrkA-N domain adh_short PF00106.20 gi|21227843|ref|NP_633765.1| - 0.052 13.4 0.1 0.12 12.3 0.0 1.6 1 0 0 1 1 1 0 short chain dehydrogenase IlvN PF07991.7 gi|21227843|ref|NP_633765.1| - 0.052 12.9 0.1 0.2 10.9 0.0 1.9 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain NAD_Gly3P_dh_N PF01210.18 gi|21227843|ref|NP_633765.1| - 0.09 12.5 0.1 0.19 11.4 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALAD PF00490.16 gi|21227844|ref|NP_633766.1| - 3.1e-147 489.6 0.0 3.5e-147 489.5 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Aminotran_3 PF00202.16 gi|21227845|ref|NP_633767.1| - 9.4e-68 228.5 0.0 1.3e-67 228.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.15 gi|21227846|ref|NP_633768.1| - 7.8e-67 224.3 0.0 1e-66 223.9 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|21227846|ref|NP_633768.1| - 7.2e-13 48.4 0.1 1.7e-12 47.2 0.0 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DHO_dh PF01180.16 gi|161485673|ref|NP_633769.2| - 4.4e-65 219.5 0.4 4.9e-65 219.3 0.3 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|161485673|ref|NP_633769.2| - 2.8e-11 42.8 0.3 2.4e-06 26.5 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|161485673|ref|NP_633769.2| - 3.8e-05 23.0 5.7 8.3e-05 21.8 3.9 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.16 gi|161485673|ref|NP_633769.2| - 0.00035 19.9 1.3 0.00054 19.2 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|161485673|ref|NP_633769.2| - 0.0041 16.3 1.7 0.013 14.7 0.2 2.1 2 0 0 2 2 2 1 PcrB family IMPDH PF00478.20 gi|161485673|ref|NP_633769.2| - 0.093 11.6 2.3 0.13 11.1 1.6 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DUF561 PF04481.7 gi|161485673|ref|NP_633769.2| - 0.13 11.1 1.3 0.15 10.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) NAD_binding_1 PF00175.16 gi|21227848|ref|NP_633770.1| - 1.4e-15 57.8 0.0 2.1e-15 57.2 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DHODB_Fe-S_bind PF10418.4 gi|21227848|ref|NP_633770.1| - 1.6e-12 46.7 4.6 3e-12 45.8 3.2 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FAD_binding_6 PF00970.19 gi|21227848|ref|NP_633770.1| - 0.00012 22.1 0.0 0.00045 20.2 0.0 2.0 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain FAA_hydrolase PF01557.13 gi|21227849|ref|NP_633771.1| - 1.1e-70 237.5 0.0 1.6e-70 237.0 0.0 1.2 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family TrmB PF01978.14 gi|21227850|ref|NP_633772.1| - 0.0029 17.2 0.2 0.0055 16.3 0.1 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB RepL PF05732.6 gi|21227850|ref|NP_633772.1| - 0.008 15.4 0.1 0.019 14.1 0.1 1.8 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_24 PF13412.1 gi|21227850|ref|NP_633772.1| - 0.018 14.4 0.2 0.027 13.8 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|21227850|ref|NP_633772.1| - 0.018 14.7 0.1 0.037 13.7 0.1 1.5 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227850|ref|NP_633772.1| - 0.027 14.2 0.1 0.037 13.8 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|21227850|ref|NP_633772.1| - 0.039 14.0 0.1 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_12 PF08461.5 gi|21227850|ref|NP_633772.1| - 0.059 13.0 0.6 0.31 10.8 0.0 2.4 2 1 1 3 3 3 0 Ribonuclease R winged-helix domain DUF4423 PF14394.1 gi|21227850|ref|NP_633772.1| - 0.076 12.5 0.3 0.35 10.3 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) HSBP1 PF06825.7 gi|21227850|ref|NP_633772.1| - 0.077 12.5 0.1 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Heat shock factor binding protein 1 DUF2513 PF10711.4 gi|21227850|ref|NP_633772.1| - 0.08 13.0 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) RNA_pol_Rpc34 PF05158.7 gi|21227850|ref|NP_633772.1| - 0.084 12.0 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit MarR PF01047.17 gi|21227850|ref|NP_633772.1| - 0.093 12.4 0.1 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 MarR family Phage_rep_org_N PF09681.5 gi|21227850|ref|NP_633772.1| - 0.12 11.9 0.1 0.14 11.7 0.1 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) FaeA PF04703.7 gi|21227850|ref|NP_633772.1| - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein tRNA-synt_1c PF00749.16 gi|21227851|ref|NP_633773.1| - 7e-65 218.7 0.0 8.5e-65 218.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|21227851|ref|NP_633773.1| - 9.8e-29 100.2 0.0 2e-28 99.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain DUF1087 PF06465.8 gi|21227851|ref|NP_633773.1| - 0.039 13.8 0.1 0.078 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) NosD PF05048.8 gi|21227852|ref|NP_633774.1| - 2.3e-45 154.5 20.9 5.5e-45 153.3 14.5 1.6 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21227852|ref|NP_633774.1| - 8.3e-14 51.6 18.3 1.9e-13 50.4 12.7 1.6 1 0 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.6 gi|21227852|ref|NP_633774.1| - 2.7e-06 26.6 9.1 0.042 12.9 4.8 2.9 2 1 1 3 3 3 3 Protein of unknown function (DUF1565) Pectate_lyase_3 PF12708.2 gi|21227852|ref|NP_633774.1| - 0.00021 21.4 8.0 0.00067 19.8 5.5 1.8 1 1 0 1 1 1 1 Pectate lyase superfamily protein TraW_N PF12477.3 gi|21227852|ref|NP_633774.1| - 8.6 6.4 6.3 1.4 8.9 1.0 2.1 2 0 0 2 2 2 0 Sex factor F TraW protein N terminal tRNA_anti-codon PF01336.20 gi|21227853|ref|NP_633775.1| - 6.1e-10 38.8 0.1 0.039 13.8 0.0 3.8 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain 2-Hacid_dh_C PF02826.14 gi|21227855|ref|NP_633777.1| - 2.3e-61 206.0 0.0 3.8e-61 205.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|21227855|ref|NP_633777.1| - 8.6e-41 138.5 2.3 1.4e-40 137.8 0.4 2.1 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.20 gi|21227855|ref|NP_633777.1| - 8.4e-06 25.1 0.0 2.8e-05 23.4 0.0 2.0 1 0 0 1 1 1 1 ACT domain IlvN PF07991.7 gi|21227855|ref|NP_633777.1| - 3e-05 23.4 0.2 0.00011 21.6 0.0 2.0 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.10 gi|21227855|ref|NP_633777.1| - 0.00021 21.1 2.4 0.0003 20.6 0.1 2.3 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|21227855|ref|NP_633777.1| - 0.039 14.3 1.2 0.77 10.2 0.0 3.2 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent DUF2240 PF09999.4 gi|21227856|ref|NP_633778.1| - 5.8e-60 200.9 0.3 6.5e-60 200.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) UTP15_C PF09384.5 gi|21227856|ref|NP_633778.1| - 0.023 14.3 0.1 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 UTP15 C terminal Ribosomal_L18e PF00828.14 gi|21227857|ref|NP_633779.1| - 1.2e-17 64.4 0.0 1.7e-17 64.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 Trp_Tyr_perm PF03222.8 gi|21227857|ref|NP_633779.1| - 0.063 12.0 0.0 0.076 11.8 0.0 1.1 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family LysM PF01476.15 gi|21227857|ref|NP_633779.1| - 0.12 12.3 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 LysM domain Ribosomal_L13 PF00572.13 gi|161485672|ref|NP_633780.2| - 2.8e-25 88.8 0.0 3.5e-25 88.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 Ribosomal_S9 PF00380.14 gi|21227859|ref|NP_633781.1| - 1.2e-32 112.6 0.2 1.4e-32 112.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SLH PF00395.15 gi|21227859|ref|NP_633781.1| - 0.055 13.2 0.1 0.15 11.8 0.0 1.8 2 0 0 2 2 2 0 S-layer homology domain RNA_pol_N PF01194.12 gi|21227860|ref|NP_633782.1| - 1.3e-29 101.9 0.4 1.4e-29 101.8 0.3 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit RNA_pol_Rpb6 PF01192.17 gi|21227861|ref|NP_633783.1| - 8.8e-20 70.2 0.0 1e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 Ribosomal_S2 PF00318.15 gi|21227862|ref|NP_633784.1| - 2.3e-38 131.5 0.0 1.7e-19 69.8 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Avirulence PF03377.8 gi|21227862|ref|NP_633784.1| - 0.023 13.4 0.0 0.026 13.2 0.0 1.2 1 0 0 1 1 1 0 Xanthomonas avirulence protein, Avr/PthA Peripla_BP_4 PF13407.1 gi|21227862|ref|NP_633784.1| - 0.13 11.6 0.1 0.22 10.8 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein domain Peripla_BP_1 PF00532.16 gi|21227862|ref|NP_633784.1| - 0.16 11.1 0.2 0.28 10.3 0.1 1.4 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family Memo PF01875.12 gi|21227863|ref|NP_633785.1| - 7.9e-83 277.5 0.0 9e-83 277.3 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.13 gi|21227863|ref|NP_633785.1| - 0.001 18.1 0.0 0.0013 17.7 0.0 1.2 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase GHMP_kinases_N PF00288.21 gi|21227864|ref|NP_633786.1| - 9.3e-19 67.2 0.8 9.3e-19 67.2 0.5 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|21227864|ref|NP_633786.1| - 1.6e-13 50.6 0.3 1.6e-13 50.6 0.2 2.2 3 0 0 3 3 3 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.4 gi|21227864|ref|NP_633786.1| - 0.03 13.5 0.0 0.06 12.6 0.0 1.6 1 0 0 1 1 1 0 Galactokinase galactose-binding signature AA_kinase PF00696.23 gi|21227865|ref|NP_633787.1| - 2.3e-36 125.5 0.1 2.7e-36 125.3 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family FMN_dh PF01070.13 gi|21227866|ref|NP_633788.1| - 4.2e-37 127.8 0.0 1.9e-24 86.2 0.0 2.3 1 1 1 2 2 2 2 FMN-dependent dehydrogenase NMO PF03060.10 gi|21227866|ref|NP_633788.1| - 8.4e-05 21.8 0.1 0.00021 20.5 0.1 1.6 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.20 gi|21227866|ref|NP_633788.1| - 0.00019 20.4 4.8 0.0017 17.2 0.2 3.0 4 0 0 4 4 4 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.16 gi|21227866|ref|NP_633788.1| - 0.00044 19.3 2.0 0.0092 14.9 0.0 2.5 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Glu_synthase PF01645.12 gi|21227866|ref|NP_633788.1| - 0.0031 16.4 0.3 0.0052 15.7 0.2 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase Amidohydro_2 PF04909.9 gi|21227866|ref|NP_633788.1| - 0.011 15.3 0.1 0.014 14.9 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase His_biosynth PF00977.16 gi|21227866|ref|NP_633788.1| - 0.014 14.6 0.7 0.57 9.4 0.1 2.6 3 0 0 3 3 3 0 Histidine biosynthesis protein ORC4_C PF14629.1 gi|21227867|ref|NP_633789.1| - 0.022 14.1 0.3 0.025 13.9 0.2 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus DUF4298 PF14131.1 gi|21227867|ref|NP_633789.1| - 0.22 11.4 2.2 0.25 11.2 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Plasmodium_Vir PF05795.6 gi|21227867|ref|NP_633789.1| - 0.3 10.2 11.4 0.3 10.2 7.9 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein RPM2 PF08579.6 gi|21227867|ref|NP_633789.1| - 3 7.9 5.0 4.2 7.5 2.2 1.9 1 1 1 2 2 2 0 Mitochondrial ribonuclease P subunit (RPM2) Lactamase_B PF00753.22 gi|21227868|ref|NP_633790.1| - 3e-17 62.9 1.5 4.2e-17 62.4 0.0 2.0 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|21227868|ref|NP_633790.1| - 2.6e-09 36.7 0.5 5.9e-09 35.6 0.3 1.6 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|21227868|ref|NP_633790.1| - 7.6e-08 32.1 0.1 5.3e-07 29.3 0.0 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain polyprenyl_synt PF00348.12 gi|21227869|ref|NP_633791.1| - 4.5e-67 225.6 0.0 5.4e-67 225.3 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Transposase_22 PF02994.9 gi|21227870|ref|NP_633792.1| - 0.029 12.8 1.7 0.042 12.3 1.2 1.1 1 0 0 1 1 1 0 L1 transposable element FtsH_ext PF06480.10 gi|21227870|ref|NP_633792.1| - 5 7.3 9.2 0.91 9.7 1.1 2.8 3 1 0 3 3 3 0 FtsH Extracellular Y1_Tnp PF01797.11 gi|21227871|ref|NP_633793.1| - 1.2e-37 128.4 1.3 1.4e-37 128.1 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like PEP-utilizers_C PF02896.13 gi|21227872|ref|NP_633794.1| - 4e-102 341.0 0.1 7.6e-102 340.1 0.1 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.14 gi|21227872|ref|NP_633794.1| - 4.9e-65 219.7 0.0 2.5e-64 217.3 0.0 1.9 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.18 gi|21227872|ref|NP_633794.1| - 6.8e-23 80.0 0.5 1.7e-22 78.7 0.4 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.8 gi|21227872|ref|NP_633794.1| - 0.029 14.1 0.7 0.74 9.6 0.0 2.9 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal Gar1 PF04410.9 gi|21227873|ref|NP_633795.1| - 4.9e-08 32.5 0.0 5e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region TFIIB PF00382.14 gi|21227874|ref|NP_633796.1| - 2.6e-47 158.4 2.6 3.7e-24 84.3 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|21227874|ref|NP_633796.1| - 5.9e-19 67.1 1.4 1.3e-18 66.0 0.6 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.6 gi|21227874|ref|NP_633796.1| - 0.00017 21.1 0.4 0.0004 19.9 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.11 gi|21227874|ref|NP_633796.1| - 0.0031 16.7 0.5 0.017 14.4 0.1 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 Cyclin_N PF00134.18 gi|21227874|ref|NP_633796.1| - 0.015 14.8 0.0 2.6 7.6 0.0 2.4 1 1 1 2 2 2 0 Cyclin, N-terminal domain zf-ribbon_3 PF13248.1 gi|21227874|ref|NP_633796.1| - 0.017 14.3 0.4 0.017 14.3 0.3 1.9 2 0 0 2 2 1 0 zinc-ribbon domain HTH_AsnC-type PF13404.1 gi|21227874|ref|NP_633796.1| - 0.02 14.4 0.2 0.084 12.4 0.1 2.1 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Lar_restr_allev PF14354.1 gi|21227874|ref|NP_633796.1| - 0.025 14.8 0.9 0.25 11.6 0.3 2.5 2 0 0 2 2 2 0 Restriction alleviation protein Lar A2L_zn_ribbon PF08792.5 gi|21227874|ref|NP_633796.1| - 0.028 13.8 1.9 0.11 11.9 1.3 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain RPA_interact_C PF14768.1 gi|21227874|ref|NP_633796.1| - 0.039 14.3 0.1 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 Replication protein A interacting C-terminal Cyclin_C PF02984.14 gi|21227874|ref|NP_633796.1| - 0.039 13.8 0.0 7.2 6.5 0.0 2.5 2 0 0 2 2 2 0 Cyclin, C-terminal domain DZR PF12773.2 gi|21227874|ref|NP_633796.1| - 0.05 13.4 1.5 0.18 11.6 0.3 2.2 2 0 0 2 2 2 0 Double zinc ribbon FYDLN_acid PF09538.5 gi|21227874|ref|NP_633796.1| - 0.055 14.0 0.2 0.19 12.3 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) HTH_24 PF13412.1 gi|21227874|ref|NP_633796.1| - 0.056 12.8 0.1 0.36 10.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Elf1 PF05129.8 gi|21227874|ref|NP_633796.1| - 0.14 11.8 1.8 0.28 10.9 0.3 2.1 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like HTH_31 PF13560.1 gi|21227874|ref|NP_633796.1| - 0.36 11.0 3.7 3.3 7.9 0.0 3.3 3 1 1 4 4 3 0 Helix-turn-helix domain Ribosomal_S27e PF01667.12 gi|21227874|ref|NP_633796.1| - 0.45 10.0 1.8 0.48 10.0 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.2 gi|21227874|ref|NP_633796.1| - 1.3 8.9 4.5 0.24 11.2 0.3 2.0 2 0 0 2 2 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|21227874|ref|NP_633796.1| - 7.5 6.5 7.2 0.95 9.4 0.3 2.8 2 1 1 3 3 3 0 Zinc ribbon domain LysE PF01810.13 gi|21227875|ref|NP_633797.1| - 3.6e-29 101.4 14.9 4.2e-29 101.1 10.3 1.0 1 0 0 1 1 1 1 LysE type translocator DUF3687 PF12459.3 gi|21227875|ref|NP_633797.1| - 0.053 12.7 3.0 0.13 11.5 2.0 1.7 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein Met_10 PF02475.11 gi|21227877|ref|NP_633799.1| - 1.6e-65 220.4 0.0 2e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|21227877|ref|NP_633799.1| - 4.7e-13 49.7 0.0 4.5e-12 46.5 0.0 2.1 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227877|ref|NP_633799.1| - 4.1e-11 42.6 0.0 1.4e-10 40.9 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|21227877|ref|NP_633799.1| - 1e-09 37.9 0.0 3.8e-09 36.1 0.0 1.6 1 1 0 2 2 2 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|21227877|ref|NP_633799.1| - 6.5e-08 32.6 0.0 1.4e-07 31.5 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|21227877|ref|NP_633799.1| - 3.9e-07 29.6 0.0 5.9e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.8 gi|21227877|ref|NP_633799.1| - 4.3e-07 29.3 0.0 7.3e-07 28.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.5 gi|21227877|ref|NP_633799.1| - 1.3e-05 24.7 0.0 2.2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.11 gi|21227877|ref|NP_633799.1| - 3.3e-05 22.9 0.0 4.4e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.1 gi|21227877|ref|NP_633799.1| - 0.00014 22.1 0.0 0.00026 21.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21227877|ref|NP_633799.1| - 0.00045 19.3 0.0 0.00069 18.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.1 gi|21227877|ref|NP_633799.1| - 0.00046 20.9 0.0 0.001 19.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|21227877|ref|NP_633799.1| - 0.00058 19.0 0.0 0.00088 18.4 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.12 gi|21227877|ref|NP_633799.1| - 0.00074 18.6 0.0 0.0023 16.9 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase ADH_zinc_N PF00107.21 gi|21227877|ref|NP_633799.1| - 0.00088 18.8 0.0 0.0017 17.9 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_23 PF13489.1 gi|21227877|ref|NP_633799.1| - 0.0017 18.0 0.0 0.003 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227877|ref|NP_633799.1| - 0.009 16.4 0.0 0.02 15.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21227877|ref|NP_633799.1| - 0.012 16.0 0.0 0.026 15.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PRMT5 PF05185.11 gi|21227877|ref|NP_633799.1| - 0.015 14.2 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase PCMT PF01135.14 gi|21227877|ref|NP_633799.1| - 0.015 14.8 0.1 0.031 13.8 0.0 1.5 2 0 0 2 2 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.13 gi|21227877|ref|NP_633799.1| - 0.02 14.4 0.0 0.034 13.6 0.0 1.3 1 0 0 1 1 1 0 DNA methylase DUF43 PF01861.11 gi|21227877|ref|NP_633799.1| - 0.033 13.1 0.0 0.09 11.7 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF43 Nol1_Nop2_Fmu PF01189.12 gi|21227877|ref|NP_633799.1| - 0.037 13.3 0.0 0.069 12.5 0.0 1.4 1 1 0 1 1 1 0 NOL1/NOP2/sun family DNA_methylase PF00145.12 gi|21227877|ref|NP_633799.1| - 0.11 11.6 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Ubie_methyltran PF01209.13 gi|21227877|ref|NP_633799.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family AhpC-TSA PF00578.16 gi|21227878|ref|NP_633800.1| - 1.1e-29 102.6 0.0 1.4e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|21227878|ref|NP_633800.1| - 2.1e-16 59.7 0.0 2.5e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.9 gi|21227878|ref|NP_633800.1| - 0.0036 16.9 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC DUF3107 PF11305.3 gi|21227878|ref|NP_633800.1| - 0.11 12.3 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3107) HisKA_2 PF07568.7 gi|21227879|ref|NP_633801.1| - 3.6e-34 116.4 1.3 1.2e-33 114.7 0.9 2.0 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|21227879|ref|NP_633801.1| - 3.4e-21 75.1 0.2 1e-19 70.3 0.1 2.4 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.21 gi|21227879|ref|NP_633801.1| - 1.5e-11 43.9 0.1 2.9e-11 43.0 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|21227879|ref|NP_633801.1| - 2.5e-07 30.9 0.1 7.2e-07 29.5 0.0 1.8 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.9 gi|21227879|ref|NP_633801.1| - 9.8e-05 22.7 0.3 0.00026 21.3 0.2 1.7 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|21227879|ref|NP_633801.1| - 0.00096 18.9 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS PF00989.19 gi|21227879|ref|NP_633801.1| - 0.048 13.4 0.1 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 PAS fold Cation_efflux PF01545.16 gi|21227880|ref|NP_633802.1| - 2.6e-61 207.2 5.0 2.9e-61 207.0 3.5 1.0 1 0 0 1 1 1 1 Cation efflux family Abhydrolase_5 PF12695.2 gi|21227881|ref|NP_633803.1| - 5.6e-16 58.5 0.0 7.3e-16 58.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|21227881|ref|NP_633803.1| - 4.2e-10 39.8 0.3 6.2e-05 22.9 0.1 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase family DLH PF01738.13 gi|21227881|ref|NP_633803.1| - 1.7e-06 27.5 0.0 2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.6 gi|21227881|ref|NP_633803.1| - 0.00022 21.0 0.0 0.00092 18.9 0.0 1.9 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.13 gi|21227881|ref|NP_633803.1| - 0.02 14.3 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Peptidase_S9 PF00326.16 gi|21227881|ref|NP_633803.1| - 0.025 13.8 0.1 6.5 5.9 0.0 2.4 1 1 1 2 2 2 0 Prolyl oligopeptidase family Hydrolase_4 PF12146.3 gi|21227881|ref|NP_633803.1| - 0.039 13.8 0.0 0.076 12.8 0.0 1.5 1 0 0 1 1 1 0 Putative lysophospholipase Abhydrolase_2 PF02230.11 gi|21227881|ref|NP_633803.1| - 0.077 12.4 0.0 2.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.15 gi|21227881|ref|NP_633803.1| - 0.11 11.9 0.1 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 alpha/beta hydrolase fold Pribosyltran PF00156.22 gi|21227882|ref|NP_633804.1| - 1.4e-30 105.5 0.5 2e-30 105.0 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|21227882|ref|NP_633804.1| - 0.00018 20.8 0.0 0.00044 19.6 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|21227882|ref|NP_633804.1| - 0.0016 17.7 0.1 0.0022 17.2 0.1 1.5 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_3 PF15610.1 gi|21227882|ref|NP_633804.1| - 0.026 13.4 0.0 2.9 6.7 0.0 2.2 1 1 1 2 2 2 0 PRTase ComF-like HisKA_2 PF07568.7 gi|21227883|ref|NP_633805.1| - 5.5e-33 112.6 0.2 1e-32 111.7 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|21227883|ref|NP_633805.1| - 1.4e-12 47.5 0.0 2.8e-12 46.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|21227883|ref|NP_633805.1| - 4.5e-11 42.4 0.0 8.7e-11 41.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|21227883|ref|NP_633805.1| - 7.3e-06 26.2 0.1 6.4e-05 23.2 0.0 2.4 2 1 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|21227883|ref|NP_633805.1| - 0.00031 20.5 0.0 0.00062 19.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21227883|ref|NP_633805.1| - 0.00067 20.0 0.1 0.0013 19.1 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase Glt_symporter PF03616.9 gi|21227884|ref|NP_633806.1| - 5.3e-10 38.3 12.8 8.4e-08 31.0 3.8 2.4 2 0 0 2 2 2 2 Sodium/glutamate symporter DUF2795 PF11387.3 gi|21227885|ref|NP_633807.1| - 1.5e-15 56.7 0.0 2.4e-15 56.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) OKR_DC_1_N PF03709.10 gi|21227885|ref|NP_633807.1| - 0.032 14.2 0.0 0.046 13.7 0.0 1.3 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain DUF1652 PF07865.6 gi|21227885|ref|NP_633807.1| - 0.066 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) DUF3898 PF13037.1 gi|21227885|ref|NP_633807.1| - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) DUF4396 PF14342.1 gi|21227886|ref|NP_633808.1| - 1e-33 116.3 22.2 1e-33 116.3 15.4 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4396) CW_binding_2 PF04122.7 gi|21227886|ref|NP_633808.1| - 0.00091 19.3 0.0 0.34 11.1 0.0 2.6 2 1 0 2 2 2 2 Putative cell wall binding repeat 2 CW_binding_2 PF04122.7 gi|21227887|ref|NP_633809.1| - 4.6e-06 26.7 0.0 6.5e-05 23.0 0.0 2.7 4 0 0 4 4 4 1 Putative cell wall binding repeat 2 VWA_2 PF13519.1 gi|21227887|ref|NP_633809.1| - 0.069 13.2 0.1 1.1 9.3 0.0 2.3 1 1 0 1 1 1 0 von Willebrand factor type A domain DnaB_C PF03796.10 gi|21227888|ref|NP_633810.1| - 0.0078 15.1 0.0 0.0086 14.9 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AKNA PF12443.3 gi|21227888|ref|NP_633810.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor DDE_Tnp_IS66 PF03050.9 gi|21227889|ref|NP_633811.1| - 2.2e-72 243.5 0.0 2.6e-72 243.3 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21227889|ref|NP_633811.1| - 1.4e-10 41.0 4.0 3.5e-10 39.7 2.8 1.7 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21227889|ref|NP_633811.1| - 1.9e-06 27.8 5.2 0.0039 17.1 0.1 3.1 3 0 0 3 3 3 2 DDE domain DZR PF12773.2 gi|21227889|ref|NP_633811.1| - 0.013 15.2 1.6 0.047 13.5 0.6 2.4 2 0 0 2 2 2 0 Double zinc ribbon Apolipoprotein PF01442.13 gi|21227889|ref|NP_633811.1| - 0.027 13.9 0.5 0.044 13.2 0.4 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21227889|ref|NP_633811.1| - 0.09 12.5 1.7 0.53 10.1 0.9 2.6 2 1 0 2 2 2 0 FIP domain zf-ribbon_3 PF13248.1 gi|21227889|ref|NP_633811.1| - 0.13 11.5 4.2 0.39 9.9 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DUF164 PF02591.10 gi|21227889|ref|NP_633811.1| - 0.14 11.9 0.1 0.14 11.9 0.1 2.1 2 0 0 2 2 1 0 Putative zinc ribbon domain zf-RING_5 PF14634.1 gi|21227889|ref|NP_633811.1| - 0.3 10.8 6.5 1.4 8.7 0.0 3.2 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21227889|ref|NP_633811.1| - 0.54 9.8 6.9 1.8 8.1 0.2 2.9 2 0 0 2 2 2 0 zinc-ribbon domain Takusan PF04822.8 gi|21227889|ref|NP_633811.1| - 1.4 8.6 6.7 0.22 11.3 1.8 1.8 2 0 0 2 2 2 0 Takusan Mut7-C PF01927.11 gi|21227889|ref|NP_633811.1| - 2.6 7.9 5.8 0.53 10.2 1.3 1.9 2 0 0 2 2 2 0 Mut7-C RNAse domain AIM24 PF01987.12 gi|21227890|ref|NP_633812.1| - 1.5e-46 158.5 0.6 1.9e-46 158.2 0.4 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF1724 PF08350.5 gi|21227892|ref|NP_633814.1| - 2.7e-22 78.0 0.0 6.1e-22 76.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21227892|ref|NP_633814.1| - 0.00012 21.7 1.0 0.00022 20.8 0.7 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227892|ref|NP_633814.1| - 0.0019 17.9 0.1 0.0034 17.1 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|21227892|ref|NP_633814.1| - 0.0056 16.2 0.2 0.015 14.9 0.1 1.7 1 0 0 1 1 1 1 HTH domain TrmB PF01978.14 gi|21227892|ref|NP_633814.1| - 0.039 13.6 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|21227892|ref|NP_633814.1| - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_Crp_2 PF13545.1 gi|21227892|ref|NP_633814.1| - 0.15 11.8 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_27 PF13463.1 gi|21227892|ref|NP_633814.1| - 0.16 12.3 0.0 0.32 11.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain zf-RING_4 PF14570.1 gi|21227893|ref|NP_633815.1| - 0.011 15.2 1.1 0.011 15.2 0.8 3.0 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain RecR PF02132.10 gi|21227893|ref|NP_633815.1| - 0.05 13.0 0.5 8.7 5.8 0.3 2.4 2 0 0 2 2 2 0 RecR protein Viral_NABP PF05515.6 gi|21227893|ref|NP_633815.1| - 0.063 13.5 1.3 1.1 9.4 0.4 2.2 2 0 0 2 2 2 0 Viral nucleic acid binding zf-UDP PF14569.1 gi|21227893|ref|NP_633815.1| - 0.38 10.5 7.4 0.045 13.5 1.9 1.9 2 0 0 2 2 2 0 Zinc-binding RING-finger DZR PF12773.2 gi|21227893|ref|NP_633815.1| - 4.7 7.1 12.3 0.28 11.0 4.0 2.0 2 0 0 2 2 2 0 Double zinc ribbon DnaJ_CXXCXGXG PF00684.14 gi|21227894|ref|NP_633816.1| - 4.5e-06 26.6 17.4 4.9e-05 23.2 12.3 2.3 1 1 1 2 2 2 2 DnaJ central domain DZR PF12773.2 gi|21227894|ref|NP_633816.1| - 0.0048 16.6 9.3 0.009 15.8 6.5 1.4 1 1 0 1 1 1 1 Double zinc ribbon zf-RING_5 PF14634.1 gi|21227894|ref|NP_633816.1| - 0.14 11.9 0.4 0.14 11.9 0.3 2.6 3 0 0 3 3 3 0 zinc-RING finger domain Stc1 PF12898.2 gi|21227894|ref|NP_633816.1| - 1.8 8.7 7.5 4.1 7.5 3.1 2.0 1 1 1 2 2 2 0 Stc1 domain A2L_zn_ribbon PF08792.5 gi|21227894|ref|NP_633816.1| - 2.3 7.7 10.4 3.2 7.3 0.4 3.3 3 1 0 3 3 3 0 A2L zinc ribbon domain zf-C4_Topoisom PF01396.14 gi|21227894|ref|NP_633816.1| - 3 7.4 8.1 17 5.0 0.1 3.2 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|21227894|ref|NP_633816.1| - 5.6 6.7 7.6 10 5.8 2.7 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PhnA_Zn_Ribbon PF08274.7 gi|21227894|ref|NP_633816.1| - 5.8 6.7 10.4 1.8 8.4 0.7 3.0 3 1 0 3 3 3 0 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.5 gi|21227894|ref|NP_633816.1| - 8.5 6.4 12.3 1 9.3 0.7 3.3 2 1 1 3 3 3 0 Zinc ribbon domain PRC PF05239.11 gi|21227895|ref|NP_633817.1| - 4.6e-20 71.2 0.0 5.6e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain PRC PF05239.11 gi|21227896|ref|NP_633818.1| - 1.4e-78 258.7 3.6 9.4e-19 67.0 0.0 4.3 4 0 0 4 4 4 4 PRC-barrel domain DUF362 PF04015.7 gi|21227897|ref|NP_633819.1| - 3.1e-62 209.7 0.0 3.8e-62 209.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|21227897|ref|NP_633819.1| - 4.1e-08 32.4 12.4 5.7e-05 22.5 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21227897|ref|NP_633819.1| - 4.8e-06 26.3 11.9 9.4e-06 25.3 8.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227897|ref|NP_633819.1| - 1.9e-05 24.2 12.9 0.015 15.2 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227897|ref|NP_633819.1| - 4.1e-05 23.2 15.8 0.00016 21.4 11.0 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227897|ref|NP_633819.1| - 5.5e-05 23.3 14.3 0.00011 22.3 9.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227897|ref|NP_633819.1| - 7e-05 23.1 13.8 0.00016 21.9 9.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227897|ref|NP_633819.1| - 0.0004 20.1 15.4 0.0021 17.8 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21227897|ref|NP_633819.1| - 0.018 15.5 9.7 0.025 15.1 1.1 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|21227897|ref|NP_633819.1| - 0.026 14.5 18.0 0.1 12.6 12.0 2.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|21227897|ref|NP_633819.1| - 0.039 12.9 0.0 0.06 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2088) Fer4_13 PF13370.1 gi|21227897|ref|NP_633819.1| - 0.52 10.7 13.1 0.89 9.9 2.9 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|21227897|ref|NP_633819.1| - 3.9 8.0 18.2 1.4 9.4 2.7 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.15 gi|21227898|ref|NP_633820.1| - 6.1e-07 29.0 0.1 1.2e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21227898|ref|NP_633820.1| - 3.1e-05 23.6 0.1 6.2e-05 22.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21227898|ref|NP_633820.1| - 0.00067 19.0 0.6 0.00067 19.0 0.4 2.3 4 0 0 4 4 4 1 Winged helix-turn-helix DNA-binding z-alpha PF02295.12 gi|21227898|ref|NP_633820.1| - 0.00088 18.9 0.6 0.0029 17.3 0.1 2.0 2 0 0 2 2 2 1 Adenosine deaminase z-alpha domain MarR PF01047.17 gi|21227898|ref|NP_633820.1| - 0.0013 18.3 0.2 0.0031 17.1 0.1 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|21227898|ref|NP_633820.1| - 0.002 17.7 0.1 0.0043 16.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|21227898|ref|NP_633820.1| - 0.0083 15.6 0.3 0.02 14.3 0.2 1.6 1 0 0 1 1 1 1 TFIIE alpha subunit DUF2250 PF10007.4 gi|21227898|ref|NP_633820.1| - 0.02 14.7 0.4 0.036 13.9 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Mga PF05043.8 gi|21227898|ref|NP_633820.1| - 0.023 14.9 0.1 0.046 13.9 0.0 1.6 2 0 0 2 2 1 0 Mga helix-turn-helix domain HTH_10 PF04967.7 gi|21227898|ref|NP_633820.1| - 0.026 14.0 0.1 0.058 12.9 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain ANTAR PF03861.9 gi|21227898|ref|NP_633820.1| - 0.043 13.4 0.1 6.8 6.3 0.0 2.2 2 0 0 2 2 2 0 ANTAR domain MarR_2 PF12802.2 gi|21227898|ref|NP_633820.1| - 0.063 12.9 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.15 gi|21227898|ref|NP_633820.1| - 0.09 12.9 0.1 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_34 PF13601.1 gi|21227898|ref|NP_633820.1| - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|21227898|ref|NP_633820.1| - 0.14 11.7 0.5 0.32 10.6 0.1 1.8 2 0 0 2 2 2 0 HTH domain Cpn10 PF00166.16 gi|21227899|ref|NP_633821.1| - 5.7e-24 83.8 1.8 6.4e-24 83.7 1.2 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Cpn60_TCP1 PF00118.19 gi|21227900|ref|NP_633822.1| - 2.7e-130 435.2 14.5 3.1e-130 435.0 10.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family RNase_H PF00075.19 gi|21227901|ref|NP_633823.1| - 0.00017 21.9 0.0 0.00023 21.4 0.0 1.4 1 1 0 1 1 1 1 RNase H DUF165 PF02592.10 gi|21227902|ref|NP_633824.1| - 1.8e-51 174.1 2.2 2.3e-51 173.7 1.5 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, YhhQ family COG1738 UNC-93 PF05978.11 gi|21227902|ref|NP_633824.1| - 0.017 14.6 0.2 0.04 13.4 0.2 1.7 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 MscS_TM PF12794.2 gi|21227902|ref|NP_633824.1| - 0.19 10.3 4.0 0.067 11.7 0.2 1.8 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 Aminotran_1_2 PF00155.16 gi|21227904|ref|NP_633826.1| - 1.1e-62 212.1 0.0 1.2e-62 211.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|21227904|ref|NP_633826.1| - 2.1e-12 46.7 0.0 3.1e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|21227904|ref|NP_633826.1| - 4.9e-09 35.7 0.0 7.7e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|21227904|ref|NP_633826.1| - 1.7e-08 33.1 0.0 2.6e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|21227904|ref|NP_633826.1| - 1.8e-05 23.6 0.0 3.1e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V OKR_DC_1 PF01276.15 gi|21227904|ref|NP_633826.1| - 0.004 15.7 0.0 0.0061 15.1 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Aminotran_3 PF00202.16 gi|21227904|ref|NP_633826.1| - 0.047 12.5 0.0 0.056 12.2 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-III Rubrerythrin PF02915.12 gi|21227906|ref|NP_633828.1| - 1.3e-23 83.8 11.7 1.7e-22 80.2 8.1 2.0 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|21227906|ref|NP_633828.1| - 0.00029 20.5 3.6 0.00071 19.3 2.5 1.8 1 1 0 1 1 1 1 Ferritin-like domain zf-RING_4 PF14570.1 gi|21227906|ref|NP_633828.1| - 0.034 13.7 1.0 0.066 12.8 0.7 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Rubredoxin PF00301.15 gi|21227906|ref|NP_633828.1| - 0.044 13.6 2.5 3.4 7.6 1.7 2.3 1 1 0 1 1 1 0 Rubredoxin DZR PF12773.2 gi|21227906|ref|NP_633828.1| - 0.062 13.1 0.5 0.099 12.4 0.3 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_3 PF13920.1 gi|21227906|ref|NP_633828.1| - 0.079 12.6 0.2 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ogr_Delta PF04606.7 gi|21227906|ref|NP_633828.1| - 0.17 11.5 1.2 14 5.4 0.0 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Rad50_zn_hook PF04423.9 gi|21227906|ref|NP_633828.1| - 0.32 10.4 3.3 2.8 7.5 0.1 2.7 1 1 1 2 2 2 0 Rad50 zinc hook motif DNA_ligase_ZBD PF03119.11 gi|21227906|ref|NP_633828.1| - 0.42 10.3 3.2 2.7 7.7 0.0 2.6 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ribbon_3 PF13248.1 gi|21227906|ref|NP_633828.1| - 1.6 8.0 4.4 3.9 6.8 3.0 1.6 1 1 0 1 1 1 0 zinc-ribbon domain PHP_C PF13263.1 gi|21227907|ref|NP_633829.1| - 0.00035 20.0 0.0 0.00088 18.7 0.0 1.7 1 0 0 1 1 1 1 PHP-associated PHP PF02811.14 gi|21227907|ref|NP_633829.1| - 0.0016 18.2 0.0 0.0024 17.7 0.0 1.4 1 0 0 1 1 1 1 PHP domain zinc_ribbon_5 PF13719.1 gi|21227907|ref|NP_633829.1| - 0.32 10.6 2.4 0.42 10.2 0.6 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21227907|ref|NP_633829.1| - 0.4 10.3 3.4 0.25 11.0 0.6 2.0 2 0 0 2 2 2 0 zinc-ribbon domain PAC2 PF09754.4 gi|21227908|ref|NP_633830.1| - 1e-54 185.7 0.0 1.2e-54 185.4 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.7 gi|298205309|ref|YP_003717787.1| - 2.3e-25 88.0 0.8 2.4e-25 88.0 0.6 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.10 gi|298205309|ref|YP_003717787.1| - 9.5e-05 21.7 0.7 0.00013 21.2 0.5 1.3 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.8 gi|298205309|ref|YP_003717787.1| - 0.0062 14.2 0.5 0.0062 14.2 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 DZR PF12773.2 gi|298205309|ref|YP_003717787.1| - 0.012 15.4 0.7 0.016 15.0 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|298205309|ref|YP_003717787.1| - 0.025 13.8 5.9 0.83 8.9 0.2 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.9 gi|298205309|ref|YP_003717787.1| - 0.026 14.1 6.3 0.54 9.9 0.4 2.2 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS zf-H2C2_2 PF13465.1 gi|298205309|ref|YP_003717787.1| - 0.033 14.4 1.3 3 8.2 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain NOB1_Zn_bind PF08772.6 gi|298205309|ref|YP_003717787.1| - 0.034 13.9 0.6 0.23 11.3 0.4 1.9 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like PHF5 PF03660.9 gi|298205309|ref|YP_003717787.1| - 0.057 13.4 0.1 0.057 13.4 0.1 1.1 1 0 0 1 1 1 0 PHF5-like protein DUF1272 PF06906.6 gi|298205309|ref|YP_003717787.1| - 0.067 13.0 1.1 0.074 12.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-C3HC4_3 PF13920.1 gi|298205309|ref|YP_003717787.1| - 0.099 12.3 2.0 0.12 12.0 1.4 1.1 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_2 PF13240.1 gi|298205309|ref|YP_003717787.1| - 0.099 12.1 3.3 4.3 6.9 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.18 gi|298205309|ref|YP_003717787.1| - 0.11 12.6 1.7 9.1 6.5 0.0 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family DUF35_N PF12172.3 gi|298205309|ref|YP_003717787.1| - 0.13 12.2 4.1 1.2 9.1 2.9 2.1 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TF_Zn_Ribbon PF08271.7 gi|298205309|ref|YP_003717787.1| - 0.19 11.0 6.7 2.8 7.3 0.6 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding zf-NADH-PPase PF09297.6 gi|298205309|ref|YP_003717787.1| - 0.22 11.0 2.4 3.7 7.1 0.1 2.4 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RING_5 PF14634.1 gi|298205309|ref|YP_003717787.1| - 0.25 11.0 3.1 0.36 10.5 2.1 1.2 1 0 0 1 1 1 0 zinc-RING finger domain zf-ISL3 PF14690.1 gi|298205309|ref|YP_003717787.1| - 0.32 11.0 4.3 2.9 7.9 0.1 2.2 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cys_rich_CPCC PF14206.1 gi|298205309|ref|YP_003717787.1| - 0.33 10.5 2.1 1.7 8.2 0.1 2.0 1 1 1 2 2 2 0 Cysteine-rich CPCC UPF0547 PF10571.4 gi|298205309|ref|YP_003717787.1| - 1 9.1 5.9 5.2 6.8 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-CCHC_6 PF15288.1 gi|298205309|ref|YP_003717787.1| - 1.7 8.3 4.9 1.8 8.2 1.0 2.1 2 0 0 2 2 2 0 Zinc knuckle RRN7 PF11781.3 gi|298205309|ref|YP_003717787.1| - 2.1 7.9 4.4 3.3 7.2 0.2 2.1 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 A2L_zn_ribbon PF08792.5 gi|298205309|ref|YP_003717787.1| - 2.3 7.7 4.8 2.5 7.6 0.6 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain Sgf11 PF08209.6 gi|298205309|ref|YP_003717787.1| - 3 7.2 5.4 1.4 8.3 0.5 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Zn-ribbon_8 PF09723.5 gi|298205309|ref|YP_003717787.1| - 3 7.8 5.3 1.1e+02 2.8 3.6 2.2 1 1 0 1 1 1 0 Zinc ribbon domain DUF3797 PF12677.2 gi|298205309|ref|YP_003717787.1| - 3.3 7.3 7.4 5.8 6.6 0.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-C2HC_2 PF13913.1 gi|298205309|ref|YP_003717787.1| - 3.9 7.2 9.3 8 6.2 1.4 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-dskA_traR PF01258.12 gi|298205309|ref|YP_003717787.1| - 4.5 7.1 6.5 3.7 7.3 0.4 2.5 2 1 1 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger zf-tcix PF14952.1 gi|298205309|ref|YP_003717787.1| - 5.4 6.4 10.0 3.9 6.8 1.5 2.2 1 1 1 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-C2H2_3 PF13878.1 gi|298205309|ref|YP_003717787.1| - 9.3 5.9 6.3 17 5.0 1.1 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO EIF_2_alpha PF07541.7 gi|21227909|ref|NP_633831.1| - 1.9e-27 95.2 0.0 3e-27 94.5 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|21227909|ref|NP_633831.1| - 1e-13 51.1 0.2 2.6e-13 49.8 0.1 1.7 1 0 0 1 1 1 1 S1 RNA binding domain LON PF02190.11 gi|21227909|ref|NP_633831.1| - 0.029 14.0 0.2 0.13 11.9 0.0 1.9 2 0 0 2 2 2 0 ATP-dependent protease La (LON) domain Ribosomal_S27e PF01667.12 gi|21227910|ref|NP_633832.1| - 5e-25 86.7 0.9 5.5e-25 86.6 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 Zn_Tnp_IS91 PF14319.1 gi|21227910|ref|NP_633832.1| - 0.0051 16.3 0.3 0.0054 16.2 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain FYVE PF01363.16 gi|21227910|ref|NP_633832.1| - 0.025 14.4 0.3 0.028 14.3 0.2 1.2 1 0 0 1 1 1 0 FYVE zinc finger HypA PF01155.14 gi|21227910|ref|NP_633832.1| - 0.028 14.0 0.3 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-BED PF02892.10 gi|21227910|ref|NP_633832.1| - 0.035 13.8 2.9 0.35 10.6 0.1 2.0 1 1 1 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.5 gi|21227910|ref|NP_633832.1| - 0.091 12.7 0.9 0.14 12.1 0.6 1.3 1 0 0 1 1 1 0 Zinc ribbon domain zf-CHY PF05495.7 gi|21227910|ref|NP_633832.1| - 0.095 12.8 0.5 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 CHY zinc finger C1_1 PF00130.17 gi|21227910|ref|NP_633832.1| - 0.12 12.1 0.3 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_3 PF13878.1 gi|21227910|ref|NP_633832.1| - 0.25 10.9 1.1 11 5.6 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zinc_ribbon_6 PF14599.1 gi|21227910|ref|NP_633832.1| - 0.26 11.0 3.0 1.1 9.0 2.0 2.0 2 1 1 3 3 3 0 Zinc-ribbon Sgf11 PF08209.6 gi|21227910|ref|NP_633832.1| - 0.27 10.5 3.4 0.76 9.1 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-trcl PF13451.1 gi|21227910|ref|NP_633832.1| - 0.68 9.6 4.3 3.1 7.5 0.4 2.1 1 1 1 2 2 2 0 Probable zinc-binding domain Ribosomal_L44 PF00935.14 gi|21227911|ref|NP_633833.1| - 1.2e-27 95.6 8.0 1.7e-27 95.2 5.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L44 Thioredoxin_4 PF13462.1 gi|21227911|ref|NP_633833.1| - 0.64 10.0 3.0 5.6 6.9 0.1 2.1 2 0 0 2 2 2 0 Thioredoxin DNA_primase_S PF01896.14 gi|21227913|ref|NP_633835.1| - 5.5e-21 74.8 0.0 2.8e-20 72.6 0.0 2.1 2 1 0 2 2 2 1 Eukaryotic and archaeal DNA primase small subunit FGE-sulfatase PF03781.11 gi|21227914|ref|NP_633836.1| - 1.9e-54 184.7 10.5 2.1e-53 181.3 7.3 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FbpA PF05833.6 gi|21227915|ref|NP_633837.1| - 2.2e-103 346.2 0.3 2.6e-103 346.0 0.2 1.0 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) PEP-utilisers_N PF05524.8 gi|21227915|ref|NP_633837.1| - 0.013 15.3 1.8 9.9 5.9 0.1 3.3 2 1 1 3 3 3 0 PEP-utilising enzyme, N-terminal Glutaredoxin2_C PF04399.8 gi|21227915|ref|NP_633837.1| - 0.085 12.4 0.5 0.2 11.2 0.4 1.7 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain DUF814 PF05670.8 gi|21227916|ref|NP_633838.1| - 9.6e-30 102.3 0.0 2.4e-29 101.0 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF814) FbpA PF05833.6 gi|21227916|ref|NP_633838.1| - 3.6e-05 22.5 5.7 5.4e-05 21.9 3.9 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF4263 PF14082.1 gi|21227916|ref|NP_633838.1| - 0.033 14.1 0.4 0.09 12.7 0.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4263) eRF1_1 PF03463.10 gi|21227917|ref|NP_633839.1| - 1.5e-34 118.3 0.8 2.6e-34 117.6 0.6 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 gi|21227917|ref|NP_633839.1| - 8.2e-24 84.0 0.8 2.5e-23 82.5 0.2 2.1 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|21227917|ref|NP_633839.1| - 4.4e-21 75.5 0.1 7.1e-21 74.9 0.1 1.3 1 0 0 1 1 1 1 eRF1 domain 2 S-layer PF07752.6 gi|21227918|ref|NP_633840.1| - 1.4e-97 325.9 9.3 1.7e-97 325.6 6.4 1.1 1 0 0 1 1 1 1 S-layer protein Methylase_S PF01420.14 gi|21227918|ref|NP_633840.1| - 0.43 10.5 6.0 1.6 8.6 4.1 1.9 1 1 0 1 1 1 0 Type I restriction modification DNA specificity domain DUF1614 PF07758.6 gi|21227919|ref|NP_633841.1| - 6.8e-55 185.5 12.8 9.3e-55 185.0 8.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1614) DisA_N PF02457.11 gi|21227920|ref|NP_633842.1| - 2.6e-30 104.0 0.6 1.7e-28 98.2 0.1 2.4 2 0 0 2 2 2 2 DisA bacterial checkpoint controller nucleotide-binding RhgB_N PF09284.5 gi|21227920|ref|NP_633842.1| - 0.056 12.7 0.2 0.6 9.4 0.0 2.0 2 0 0 2 2 2 0 Rhamnogalacturonase B, N-terminal MULE PF10551.4 gi|21227921|ref|NP_633843.1| - 3.6e-11 43.0 0.0 8.4e-11 41.8 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21227921|ref|NP_633843.1| - 0.0001 21.6 1.6 0.0006 19.1 1.1 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21227921|ref|NP_633843.1| - 0.023 14.2 1.9 0.033 13.7 0.6 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-ribbon_3 PF13248.1 gi|21227921|ref|NP_633843.1| - 0.57 9.4 2.7 0.28 10.4 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain LigT_PEase PF02834.11 gi|21227922|ref|NP_633844.1| - 3.3e-30 103.9 0.0 3.2e-16 59.0 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.1 gi|21227922|ref|NP_633844.1| - 7.6e-14 51.7 0.0 8.7e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.4 gi|21227922|ref|NP_633844.1| - 8.6e-10 38.6 0.0 1e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Corona_NS2A PF05213.7 gi|21227922|ref|NP_633844.1| - 0.0039 16.5 0.0 0.0049 16.2 0.0 1.2 1 0 0 1 1 1 1 Coronavirus NS2A protein B PF02216.11 gi|21227922|ref|NP_633844.1| - 0.053 13.2 0.2 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 B domain Rep_fac_C PF08542.6 gi|21227923|ref|NP_633845.1| - 3.8e-19 68.4 0.0 1.3e-18 66.7 0.0 1.9 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA PF00004.24 gi|21227923|ref|NP_633845.1| - 4.8e-18 65.6 0.0 1e-17 64.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.1 gi|21227923|ref|NP_633845.1| - 3.1e-16 59.4 0.0 2.2e-14 53.4 0.0 2.2 1 1 0 1 1 1 1 DNA polymerase III, delta subunit RuvB_N PF05496.7 gi|21227923|ref|NP_633845.1| - 7.6e-08 31.6 0.0 9.3e-07 28.1 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|21227923|ref|NP_633845.1| - 1.4e-07 31.7 0.0 0.0069 16.5 0.0 2.9 2 1 0 3 3 3 2 AAA domain Rad17 PF03215.10 gi|21227923|ref|NP_633845.1| - 7.9e-07 28.1 0.0 5.2e-05 22.1 0.0 2.2 1 1 0 2 2 2 1 Rad17 cell cycle checkpoint protein AAA_16 PF13191.1 gi|21227923|ref|NP_633845.1| - 5.2e-06 26.5 0.1 0.001 19.0 0.0 2.6 2 1 1 3 3 3 1 AAA ATPase domain AAA_14 PF13173.1 gi|21227923|ref|NP_633845.1| - 7e-06 25.9 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_3 PF07726.6 gi|21227923|ref|NP_633845.1| - 2.8e-05 23.7 0.0 6.6e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.16 gi|21227923|ref|NP_633845.1| - 0.0001 21.5 0.0 0.013 14.6 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.8 gi|21227923|ref|NP_633845.1| - 0.00076 18.3 0.1 0.005 15.6 0.0 2.2 2 1 0 2 2 2 1 TIP49 C-terminus DNA_pol3_delta PF06144.8 gi|21227923|ref|NP_633845.1| - 0.0011 18.4 0.0 0.0034 16.9 0.0 1.7 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA_5 PF07728.9 gi|21227923|ref|NP_633845.1| - 0.0036 17.0 0.0 0.015 15.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.9 gi|21227923|ref|NP_633845.1| - 0.012 15.5 0.0 0.031 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_17 PF13207.1 gi|21227923|ref|NP_633845.1| - 0.012 16.3 0.1 0.067 14.0 0.1 2.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|21227923|ref|NP_633845.1| - 0.015 14.7 0.0 0.034 13.5 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_10 PF12846.2 gi|21227923|ref|NP_633845.1| - 0.017 14.5 0.4 1.5 8.1 0.0 2.6 2 1 1 3 3 3 0 AAA-like domain ResIII PF04851.10 gi|21227923|ref|NP_633845.1| - 0.023 14.5 0.0 0.046 13.5 0.0 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.1 gi|21227923|ref|NP_633845.1| - 0.024 14.3 0.0 0.055 13.2 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain Sigma54_activ_2 PF14532.1 gi|21227923|ref|NP_633845.1| - 0.025 14.6 0.0 0.11 12.5 0.0 2.0 1 1 0 1 1 1 0 Sigma-54 interaction domain SNF2_N PF00176.18 gi|21227923|ref|NP_633845.1| - 0.027 13.2 0.0 0.49 9.1 0.0 2.1 1 1 0 2 2 2 0 SNF2 family N-terminal domain Sigma54_activat PF00158.21 gi|21227923|ref|NP_633845.1| - 0.042 13.3 0.0 6 6.3 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_18 PF13238.1 gi|21227923|ref|NP_633845.1| - 0.043 14.1 0.0 0.12 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|21227923|ref|NP_633845.1| - 0.053 12.9 0.0 0.11 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.1 gi|21227923|ref|NP_633845.1| - 0.1 12.1 0.0 0.16 11.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|21227923|ref|NP_633845.1| - 0.13 11.7 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Keratin_B2_2 PF13885.1 gi|21227924|ref|NP_633846.1| - 0.056 13.1 0.8 0.071 12.8 0.6 1.1 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein CAF1 PF04857.15 gi|21227924|ref|NP_633846.1| - 0.15 11.3 0.4 0.16 11.2 0.3 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease Sm_multidrug_ex PF06695.6 gi|21227925|ref|NP_633847.1| - 1e-43 148.3 1.0 1.5e-43 147.8 0.7 1.2 1 0 0 1 1 1 1 Putative small multi-drug export protein SNARE_assoc PF09335.6 gi|21227925|ref|NP_633847.1| - 0.0045 17.1 10.6 0.035 14.3 2.0 2.4 2 0 0 2 2 2 2 SNARE associated Golgi protein PIRT PF15099.1 gi|21227925|ref|NP_633847.1| - 0.17 11.0 0.7 0.28 10.4 0.5 1.4 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family DUF3317 PF11779.3 gi|21227925|ref|NP_633847.1| - 1.5 8.3 4.9 0.26 10.7 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3317) Fer4 PF00037.22 gi|21227926|ref|NP_633848.1| - 1.3e-15 56.2 15.0 6.1e-09 35.1 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227926|ref|NP_633848.1| - 1.7e-15 57.0 32.0 2.8e-09 37.2 7.7 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21227926|ref|NP_633848.1| - 9.1e-13 47.4 13.0 1.2e-06 28.1 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227926|ref|NP_633848.1| - 3e-12 46.1 8.0 3.2e-06 26.8 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227926|ref|NP_633848.1| - 3.3e-12 45.5 14.6 1.1e-06 28.1 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21227926|ref|NP_633848.1| - 4.4e-12 46.0 21.4 2.2e-08 34.2 7.5 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227926|ref|NP_633848.1| - 8.2e-12 44.8 11.4 6.3e-07 29.1 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227926|ref|NP_633848.1| - 3.2e-11 43.0 19.4 1.6e-09 37.6 6.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21227926|ref|NP_633848.1| - 5.2e-08 32.5 13.4 2.5e-05 24.2 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21227926|ref|NP_633848.1| - 1.2e-07 31.9 7.5 0.00061 20.1 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227926|ref|NP_633848.1| - 1.4e-07 32.1 9.1 0.00027 21.6 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|21227926|ref|NP_633848.1| - 1.4e-06 28.4 17.9 0.005 17.3 2.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21227926|ref|NP_633848.1| - 5.9e-06 26.5 21.8 0.00021 21.5 8.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227926|ref|NP_633848.1| - 4.3e-05 23.9 8.9 0.014 15.9 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21227926|ref|NP_633848.1| - 9.8e-05 22.6 13.6 0.01 16.2 2.0 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_20 PF14691.1 gi|21227926|ref|NP_633848.1| - 0.0046 16.5 7.1 0.26 10.9 1.0 2.0 1 1 0 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_11 PF13247.1 gi|21227926|ref|NP_633848.1| - 0.0059 16.4 4.8 0.019 14.8 2.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain E6 PF00518.12 gi|21227926|ref|NP_633848.1| - 0.051 13.9 2.7 0.058 13.7 1.8 1.1 1 0 0 1 1 1 0 Early Protein (E6) DUF678 PF05077.7 gi|21227926|ref|NP_633848.1| - 1.9 8.5 7.6 0.78 9.7 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) CBFD_NFYB_HMF PF00808.18 gi|21227927|ref|NP_633849.1| - 2.2e-16 59.6 0.2 2.7e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|21227927|ref|NP_633849.1| - 1.9e-11 43.9 0.2 2.3e-11 43.6 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Bromo_TP PF07524.8 gi|21227927|ref|NP_633849.1| - 5.6e-06 26.0 0.0 6.7e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated CENP-S PF15630.1 gi|21227927|ref|NP_633849.1| - 1.3e-05 25.2 0.0 1.5e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Kinetochore component CENP-S CENP-T PF15511.1 gi|21227927|ref|NP_633849.1| - 0.0012 18.2 0.0 0.0012 18.1 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T TFIID-31kDa PF02291.10 gi|21227927|ref|NP_633849.1| - 0.0012 18.6 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TAF PF02969.12 gi|21227927|ref|NP_633849.1| - 0.0048 16.8 0.1 0.0054 16.6 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.11 gi|21227927|ref|NP_633849.1| - 0.024 14.4 0.0 0.026 14.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit Peptidase_C39 PF03412.10 gi|21227927|ref|NP_633849.1| - 0.04 13.7 0.1 0.041 13.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase C39 family TFIID_20kDa PF03847.8 gi|21227927|ref|NP_633849.1| - 0.061 13.6 0.0 0.068 13.4 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.5 gi|21227927|ref|NP_633849.1| - 0.061 13.2 1.0 0.21 11.4 0.2 2.0 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit DUF2703 PF10865.3 gi|21227927|ref|NP_633849.1| - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) Methyltransf_25 PF13649.1 gi|21227928|ref|NP_633850.1| - 8.5e-09 35.7 0.0 1.7e-08 34.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21227928|ref|NP_633850.1| - 0.00016 21.6 0.1 0.00033 20.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227928|ref|NP_633850.1| - 0.00048 20.6 0.0 0.0027 18.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227928|ref|NP_633850.1| - 0.0029 18.0 0.0 0.0082 16.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21227928|ref|NP_633850.1| - 0.0042 16.8 0.0 0.008 15.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21227928|ref|NP_633850.1| - 0.018 14.3 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain DUF4340 PF14238.1 gi|21227928|ref|NP_633850.1| - 0.025 14.2 0.0 0.041 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4340) tRNA_U5-meth_tr PF05958.6 gi|21227928|ref|NP_633850.1| - 0.042 12.5 0.0 0.08 11.6 0.0 1.4 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DASH_Dam1 PF08653.5 gi|21227928|ref|NP_633850.1| - 0.071 12.8 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF1793 PF08760.6 gi|21227928|ref|NP_633850.1| - 0.075 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1793) PYC_OADA PF02436.13 gi|21227929|ref|NP_633851.1| - 1.4e-65 220.4 0.2 2.5e-65 219.5 0.1 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.14 gi|21227929|ref|NP_633851.1| - 2e-43 148.7 0.0 2.9e-43 148.2 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.17 gi|21227929|ref|NP_633851.1| - 4e-17 61.6 2.8 4e-17 61.6 1.9 2.2 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|21227929|ref|NP_633851.1| - 1.6e-09 37.2 0.3 3.3e-05 23.4 0.1 2.7 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.1 gi|21227929|ref|NP_633851.1| - 2.8e-05 24.4 1.5 0.021 15.1 0.0 2.8 3 0 0 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.1 gi|21227929|ref|NP_633851.1| - 0.00022 20.8 1.0 0.001 18.7 0.3 2.4 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_2 PF12700.2 gi|21227929|ref|NP_633851.1| - 0.00041 19.6 0.2 0.1 11.7 0.0 2.4 1 1 1 2 2 2 2 HlyD family secretion protein HlyD PF00529.15 gi|21227929|ref|NP_633851.1| - 0.0054 16.0 0.2 0.029 13.6 0.0 2.0 1 1 1 2 2 2 1 HlyD family secretion protein NQRA PF05896.6 gi|21227929|ref|NP_633851.1| - 0.02 14.0 0.2 0.036 13.2 0.2 1.4 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GCV_H PF01597.14 gi|21227929|ref|NP_633851.1| - 0.029 14.0 0.9 0.092 12.4 0.6 1.9 1 0 0 1 1 1 0 Glycine cleavage H-protein CPSase_L_D2 PF02786.12 gi|161485671|ref|NP_633852.2| - 3.6e-82 274.7 0.1 5.9e-82 274.0 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|161485671|ref|NP_633852.2| - 6.6e-45 151.7 1.0 1.6e-44 150.4 0.0 2.2 3 0 0 3 3 2 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 gi|161485671|ref|NP_633852.2| - 2.4e-42 143.2 0.0 4.7e-42 142.3 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_4 PF13535.1 gi|161485671|ref|NP_633852.2| - 2.2e-17 63.4 0.0 5.5e-17 62.1 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|161485671|ref|NP_633852.2| - 1.5e-16 60.0 0.0 1e-15 57.3 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|161485671|ref|NP_633852.2| - 2.2e-14 53.3 0.1 6.7e-14 51.7 0.0 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|161485671|ref|NP_633852.2| - 4.2e-12 45.9 0.0 4.9e-11 42.4 0.0 2.2 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.17 gi|161485671|ref|NP_633852.2| - 4.2e-08 32.7 0.1 7.7e-08 31.8 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|161485671|ref|NP_633852.2| - 6.4e-08 32.6 0.0 1.4e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|161485671|ref|NP_633852.2| - 1.9e-05 24.3 0.4 3.6e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.1 gi|161485671|ref|NP_633852.2| - 0.00041 19.6 0.1 0.0011 18.1 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp domain OAD_gamma PF04277.8 gi|161485671|ref|NP_633852.2| - 0.019 15.3 3.1 0.054 13.8 2.2 1.7 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain BPL_LplA_LipB PF03099.14 gi|21227931|ref|NP_633853.1| - 4.7e-24 84.7 0.0 7.8e-24 84.0 0.0 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.7 gi|21227931|ref|NP_633853.1| - 3.8e-17 61.6 0.6 7.8e-17 60.6 0.1 1.8 2 0 0 2 2 2 1 HTH domain BPL_C PF02237.12 gi|21227931|ref|NP_633853.1| - 6.6e-11 41.7 0.1 1.9e-10 40.2 0.0 1.8 2 0 0 2 2 2 1 Biotin protein ligase C terminal domain HTH_24 PF13412.1 gi|21227931|ref|NP_633853.1| - 0.0002 20.6 0.0 0.00038 19.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_28 PF13518.1 gi|21227931|ref|NP_633853.1| - 0.015 15.2 0.1 0.045 13.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|21227931|ref|NP_633853.1| - 0.043 13.4 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain S-layer PF07752.6 gi|21227932|ref|NP_633854.1| - 2e-08 33.7 0.1 2.5e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 S-layer protein DnaB_C PF03796.10 gi|21227933|ref|NP_633855.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21227933|ref|NP_633855.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21227933|ref|NP_633855.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21227933|ref|NP_633855.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.9 gi|21227934|ref|NP_633856.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21227934|ref|NP_633856.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21227934|ref|NP_633856.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21227934|ref|NP_633856.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21227934|ref|NP_633856.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21227934|ref|NP_633856.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain CENP-F_leu_zip PF10473.4 gi|21227935|ref|NP_633857.1| - 0.00016 21.5 13.2 0.00016 21.5 9.1 2.9 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IncA PF04156.9 gi|21227935|ref|NP_633857.1| - 0.0057 16.2 10.9 0.0057 16.2 7.5 3.1 1 1 2 3 3 3 2 IncA protein Seryl_tRNA_N PF02403.17 gi|21227935|ref|NP_633857.1| - 0.012 15.6 34.9 0.032 14.2 5.5 4.5 1 1 3 5 5 5 0 Seryl-tRNA synthetase N-terminal domain DUF1664 PF07889.7 gi|21227935|ref|NP_633857.1| - 0.024 14.4 23.8 0.89 9.3 1.4 4.2 2 1 1 4 4 4 0 Protein of unknown function (DUF1664) HsbA PF12296.3 gi|21227935|ref|NP_633857.1| - 0.025 14.4 5.2 0.08 12.8 0.1 3.7 3 1 2 5 5 5 0 Hydrophobic surface binding protein A Reo_sigmaC PF04582.7 gi|21227935|ref|NP_633857.1| - 0.15 11.2 10.3 0.26 10.4 0.7 2.9 1 1 1 2 2 2 0 Reovirus sigma C capsid protein MCPsignal PF00015.16 gi|21227935|ref|NP_633857.1| - 0.21 11.1 11.1 2 7.8 0.9 2.8 1 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Spc7 PF08317.6 gi|21227935|ref|NP_633857.1| - 0.31 9.6 36.7 0.12 10.9 8.7 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein V_ATPase_I PF01496.14 gi|21227935|ref|NP_633857.1| - 0.34 8.7 24.6 0.58 7.9 16.5 1.7 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family NPV_P10 PF05531.7 gi|21227935|ref|NP_633857.1| - 0.53 10.5 14.5 0.86 9.8 1.0 4.7 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein IL5 PF02025.10 gi|21227935|ref|NP_633857.1| - 0.63 10.0 4.8 2.7 8.0 0.1 3.0 2 1 0 3 3 3 0 Interleukin 5 DUF3450 PF11932.3 gi|21227935|ref|NP_633857.1| - 0.65 9.2 21.1 0.17 11.0 2.3 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) WEMBL PF05701.6 gi|21227935|ref|NP_633857.1| - 1.2 7.5 37.8 10 4.4 26.2 2.1 1 1 0 1 1 1 0 Weak chloroplast movement under blue light DUF948 PF06103.6 gi|21227935|ref|NP_633857.1| - 1.3 8.9 11.1 4.1 7.3 1.1 4.1 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.4 gi|21227935|ref|NP_633857.1| - 1.9 7.3 36.8 0.11 11.4 5.6 2.9 1 1 1 3 3 3 0 UV radiation resistance protein and autophagy-related subunit 14 APG6 PF04111.7 gi|21227935|ref|NP_633857.1| - 2.5 7.0 37.1 0.57 9.1 7.5 3.0 1 1 1 3 3 3 0 Autophagy protein Apg6 Nup54 PF13874.1 gi|21227935|ref|NP_633857.1| - 6 6.5 26.3 35 4.0 7.6 4.1 1 1 0 2 2 2 0 Nucleoporin complex subunit 54 DUF972 PF06156.8 gi|21227935|ref|NP_633857.1| - 8.8 6.7 30.9 2.6 8.4 1.8 4.1 2 2 1 3 3 3 0 Protein of unknown function (DUF972) Plasmid_killer PF05015.8 gi|21227935|ref|NP_633857.1| - 9.5 6.4 10.6 5.5 7.2 0.4 3.2 2 1 1 3 3 3 0 Plasmid maintenance system killer protein Mnd1 PF03962.10 gi|21227936|ref|NP_633858.1| - 0.00069 19.3 5.8 0.00069 19.3 4.0 2.2 1 1 1 2 2 2 1 Mnd1 family Peptidase_M75 PF09375.5 gi|21227936|ref|NP_633858.1| - 0.015 14.6 1.9 0.28 10.4 0.3 2.1 2 0 0 2 2 2 0 Imelysin CorA PF01544.13 gi|21227936|ref|NP_633858.1| - 0.63 9.0 5.2 0.68 8.9 2.6 1.6 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Fib_alpha PF08702.5 gi|21227936|ref|NP_633858.1| - 0.63 10.1 11.6 0.58 10.2 1.9 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family CHASE3 PF05227.8 gi|21227936|ref|NP_633858.1| - 1.2 8.8 6.7 0.49 10.0 1.7 2.0 1 1 1 2 2 2 0 CHASE3 domain Endotoxin_N PF03945.9 gi|21227936|ref|NP_633858.1| - 1.2 8.4 3.4 1.9 7.8 0.4 2.2 2 1 0 2 2 2 0 delta endotoxin, N-terminal domain Nup54 PF13874.1 gi|21227936|ref|NP_633858.1| - 2.1 7.9 9.9 5.3 6.7 0.2 2.6 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF424 PF04242.8 gi|21227937|ref|NP_633859.1| - 3.7e-32 110.2 0.2 4.2e-32 110.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) Plectin PF00681.15 gi|21227937|ref|NP_633859.1| - 0.096 12.2 0.0 0.82 9.2 0.0 2.3 2 1 1 3 3 3 0 Plectin repeat RNase_PH_C PF03725.10 gi|21227937|ref|NP_633859.1| - 1.3 8.9 4.4 3.9 7.4 0.2 2.4 2 1 0 2 2 2 0 3' exoribonuclease family, domain 2 MCM PF00493.18 gi|21227938|ref|NP_633860.1| - 7.6e-133 442.3 0.0 1.1e-132 441.8 0.0 1.2 1 0 0 1 1 1 1 MCM2/3/5 family MCM_N PF14551.1 gi|21227938|ref|NP_633860.1| - 1.1e-16 61.4 0.3 5.7e-16 59.0 0.1 2.4 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|21227938|ref|NP_633860.1| - 1.6e-06 27.4 0.1 0.00015 21.0 0.0 2.3 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|21227938|ref|NP_633860.1| - 1.4e-05 24.8 0.0 4.2e-05 23.2 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|21227938|ref|NP_633860.1| - 0.0048 16.5 0.1 0.023 14.2 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|21227938|ref|NP_633860.1| - 0.035 13.9 0.0 13 5.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain tRNA_anti-codon PF01336.20 gi|21227938|ref|NP_633860.1| - 0.12 12.2 0.1 0.59 10.0 0.0 2.1 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain SpoU_methylase PF00588.14 gi|21227939|ref|NP_633861.1| - 1.2e-31 109.5 0.0 1.6e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family OTCace PF00185.19 gi|21227939|ref|NP_633861.1| - 0.022 14.6 0.0 0.033 14.0 0.0 1.2 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Methyltrn_RNA_4 PF09936.4 gi|21227939|ref|NP_633861.1| - 0.031 13.7 0.0 0.061 12.8 0.0 1.5 1 1 0 1 1 1 0 SAM-dependent RNA methyltransferase AdoHcyase_NAD PF00670.16 gi|21227939|ref|NP_633861.1| - 0.11 12.3 0.0 0.29 10.9 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4_7 PF12838.2 gi|21227940|ref|NP_633862.1| - 1.2e-13 51.1 27.8 3e-09 37.1 11.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21227940|ref|NP_633862.1| - 1.8e-13 49.4 14.2 8.4e-09 34.6 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227940|ref|NP_633862.1| - 1.5e-11 43.6 16.4 2.6e-07 30.2 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21227940|ref|NP_633862.1| - 1.1e-10 40.7 17.0 5.9e-08 32.1 2.5 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21227940|ref|NP_633862.1| - 3.6e-10 39.4 15.0 7.2e-10 38.5 10.5 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227940|ref|NP_633862.1| - 4.1e-09 36.1 11.5 5.2e-09 35.8 8.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227940|ref|NP_633862.1| - 2.5e-08 34.0 30.3 6.7e-06 26.2 12.1 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227940|ref|NP_633862.1| - 1.1e-07 32.3 1.2 1.1e-07 32.3 0.8 2.1 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|21227940|ref|NP_633862.1| - 2.8e-06 27.2 16.6 0.00011 22.2 2.1 2.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21227940|ref|NP_633862.1| - 1.9e-05 24.5 17.2 7e-05 22.7 12.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21227940|ref|NP_633862.1| - 6.6e-05 23.2 3.9 6.6e-05 23.2 2.7 2.3 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21227940|ref|NP_633862.1| - 0.00037 20.8 18.6 0.013 15.9 3.1 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227940|ref|NP_633862.1| - 0.0013 19.4 15.6 0.11 13.2 3.0 2.3 1 1 3 4 4 4 4 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|21227940|ref|NP_633862.1| - 0.0027 18.0 17.5 0.024 14.9 3.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21227940|ref|NP_633862.1| - 0.02 15.4 24.2 0.023 15.2 4.8 2.5 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21227940|ref|NP_633862.1| - 0.14 12.0 8.7 0.43 10.4 6.0 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|21227940|ref|NP_633862.1| - 1.7 8.5 8.7 4.9 7.0 0.4 2.2 1 1 1 2 2 2 0 Divergent 4Fe-4S mono-cluster DUF678 PF05077.7 gi|21227940|ref|NP_633862.1| - 9.3 6.3 9.8 11 6.0 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) Peptidase_C39_2 PF13529.1 gi|21227941|ref|NP_633863.1| - 2.1e-14 54.1 3.9 2.1e-14 54.1 2.7 1.9 1 1 0 2 2 2 1 Peptidase_C39 like family Peptidase_C1 PF00112.18 gi|21227941|ref|NP_633863.1| - 0.26 11.1 9.7 0.083 12.7 0.6 2.3 2 1 0 2 2 2 0 Papain family cysteine protease NosD PF05048.8 gi|21227942|ref|NP_633864.1| - 1.4e-16 60.3 72.4 1.1e-08 34.5 19.0 2.5 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21227942|ref|NP_633864.1| - 3.7e-11 43.0 70.6 6.9e-08 32.3 24.5 3.2 2 1 1 3 3 3 2 Right handed beta helix region UPF0731 PF14982.1 gi|21227943|ref|NP_633865.1| - 0.13 12.1 0.0 0.28 11.1 0.0 1.6 1 1 0 1 1 1 0 UPF0731 family NIR_SIR PF01077.17 gi|21227944|ref|NP_633866.1| - 1.4e-36 125.2 0.1 1.8e-36 124.8 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|21227944|ref|NP_633866.1| - 2e-15 56.1 0.0 3.2e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain PMBR PF09373.5 gi|21227944|ref|NP_633866.1| - 0.012 15.5 0.1 0.032 14.1 0.0 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat Nitrate_red_gam PF02665.9 gi|21227945|ref|NP_633867.1| - 4.6e-07 29.4 7.8 1.2e-05 24.7 0.8 2.5 2 0 0 2 2 2 2 Nitrate reductase gamma subunit CCG PF02754.11 gi|21227946|ref|NP_633868.1| - 2.6e-35 120.3 2.7 8.8e-19 67.3 0.3 3.0 4 0 0 4 4 3 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|21227946|ref|NP_633868.1| - 2.7e-09 36.9 3.3 2.7e-09 36.9 2.3 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21227946|ref|NP_633868.1| - 9e-09 35.5 5.1 9e-09 35.5 3.6 2.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21227946|ref|NP_633868.1| - 1.3e-08 35.0 2.1 1.3e-08 35.0 1.5 2.8 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227946|ref|NP_633868.1| - 3.9e-08 33.4 11.7 0.00033 20.8 0.4 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21227946|ref|NP_633868.1| - 1.2e-07 32.0 11.5 0.0018 18.6 0.2 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227946|ref|NP_633868.1| - 1.6e-06 27.8 7.4 1.6e-06 27.8 5.2 2.9 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21227946|ref|NP_633868.1| - 8.6e-05 21.9 13.1 0.0062 16.0 1.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21227946|ref|NP_633868.1| - 0.00049 20.7 14.3 0.0018 18.9 7.9 3.0 2 1 1 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21227946|ref|NP_633868.1| - 0.00067 19.4 7.8 0.097 12.5 0.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227946|ref|NP_633868.1| - 0.00087 19.0 16.2 0.014 15.2 1.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21227946|ref|NP_633868.1| - 0.012 15.4 1.8 0.012 15.4 1.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21227946|ref|NP_633868.1| - 0.017 15.6 4.2 0.017 15.6 2.9 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21227946|ref|NP_633868.1| - 0.17 12.4 7.4 2.1 8.9 0.2 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF116 PF01976.12 gi|21227947|ref|NP_633869.1| - 1.7e-43 147.8 6.5 2e-43 147.6 4.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane PF01061.19 gi|21227947|ref|NP_633869.1| - 0.0091 15.1 3.8 0.012 14.7 2.7 1.1 1 0 0 1 1 1 1 ABC-2 type transporter HIG_1_N PF04588.8 gi|21227947|ref|NP_633869.1| - 0.1 12.3 1.1 0.28 10.9 0.7 1.8 1 1 0 1 1 1 0 Hypoxia induced protein conserved region ABC2_membrane_3 PF12698.2 gi|21227947|ref|NP_633869.1| - 0.73 8.8 5.9 0.97 8.3 4.1 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF116 PF01976.12 gi|21227948|ref|NP_633870.1| - 1.2e-41 141.8 0.3 1.5e-41 141.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF116 NAD_binding_8 PF13450.1 gi|21227949|ref|NP_633871.1| - 1.7e-09 37.5 0.1 7.1e-08 32.3 0.0 3.0 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|21227949|ref|NP_633871.1| - 5.9e-05 21.7 0.5 0.00011 20.8 0.0 1.7 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.22 gi|21227949|ref|NP_633871.1| - 7e-05 23.1 0.1 0.0011 19.2 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|21227949|ref|NP_633871.1| - 9.9e-05 21.3 0.3 0.0016 17.4 0.1 2.2 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21227949|ref|NP_633871.1| - 0.00055 18.9 0.0 0.0035 16.2 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|21227949|ref|NP_633871.1| - 0.0027 17.5 0.3 0.0047 16.8 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21227949|ref|NP_633871.1| - 0.017 15.1 0.1 0.069 13.1 0.0 1.8 1 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|21227949|ref|NP_633871.1| - 0.027 13.5 0.0 0.047 12.7 0.0 1.4 1 0 0 1 1 1 0 Thi4 family GIDA PF01134.17 gi|21227949|ref|NP_633871.1| - 0.043 12.6 0.0 0.071 11.9 0.0 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A SE PF08491.5 gi|21227949|ref|NP_633871.1| - 0.049 12.4 0.0 0.079 11.7 0.0 1.4 1 0 0 1 1 1 0 Squalene epoxidase NAD_Gly3P_dh_N PF01210.18 gi|21227949|ref|NP_633871.1| - 0.052 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA_assoc_3 PF13932.1 gi|21227949|ref|NP_633871.1| - 0.075 13.0 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 GidA associated domain 3 Trp_halogenase PF04820.9 gi|21227951|ref|NP_633873.1| - 2e-11 43.1 0.0 6e-08 31.7 0.0 2.0 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.14 gi|21227951|ref|NP_633873.1| - 7.5e-11 41.6 0.0 1.6e-08 34.0 0.0 2.9 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|21227951|ref|NP_633873.1| - 1e-10 41.0 0.2 3.7e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|21227951|ref|NP_633873.1| - 1.6e-07 30.7 0.0 2.3e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.9 gi|21227951|ref|NP_633873.1| - 1.1e-06 28.6 0.0 2.6e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.9 gi|21227951|ref|NP_633873.1| - 1.2e-06 27.2 0.1 0.0036 15.8 0.0 2.6 3 0 0 3 3 3 2 HI0933-like protein NAD_binding_8 PF13450.1 gi|21227951|ref|NP_633873.1| - 0.00049 20.0 0.1 0.01 15.8 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|21227951|ref|NP_633873.1| - 0.00051 19.1 0.1 0.0013 17.8 0.0 1.6 2 0 0 2 2 2 1 Thi4 family PCNA_N PF00705.13 gi|21227951|ref|NP_633873.1| - 0.0011 18.4 0.1 0.0021 17.5 0.0 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Lycopene_cycl PF05834.7 gi|21227951|ref|NP_633873.1| - 0.0015 17.5 0.0 0.017 14.0 0.0 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox PF00070.22 gi|21227951|ref|NP_633873.1| - 0.0046 17.3 0.1 4.2 7.8 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21227951|ref|NP_633873.1| - 0.0048 15.8 0.0 0.0091 14.9 0.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|21227951|ref|NP_633873.1| - 0.0074 15.1 0.1 0.015 14.1 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|21227951|ref|NP_633873.1| - 0.08 12.9 0.0 0.18 11.8 0.0 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Dus PF01207.12 gi|21227953|ref|NP_633875.1| - 5e-14 51.8 0.1 1.2e-13 50.5 0.1 1.6 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.16 gi|21227953|ref|NP_633875.1| - 2.2e-07 30.4 0.2 5.6e-07 29.0 0.1 1.6 1 1 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|21227953|ref|NP_633875.1| - 0.003 16.4 0.1 0.0046 15.8 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CitG PF01874.11 gi|21227954|ref|NP_633876.1| - 5.8e-102 340.5 0.0 6.8e-102 340.3 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.7 gi|21227955|ref|NP_633877.1| - 1e-56 191.2 0.0 1.2e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Flavoprotein PF02441.14 gi|21227956|ref|NP_633878.1| - 2.9e-18 65.7 0.0 4.2e-18 65.2 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.22 gi|21227956|ref|NP_633878.1| - 3.4e-08 32.7 12.4 2e-07 30.3 1.5 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21227956|ref|NP_633878.1| - 3.6e-06 26.7 2.9 5.4e-06 26.2 2.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21227956|ref|NP_633878.1| - 1.3e-05 25.7 8.6 0.0016 19.1 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|21227956|ref|NP_633878.1| - 2.2e-05 24.1 12.7 0.0025 17.6 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21227956|ref|NP_633878.1| - 2.3e-05 24.6 22.9 0.0004 20.7 1.2 2.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21227956|ref|NP_633878.1| - 2.5e-05 24.4 22.3 0.0008 19.6 1.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21227956|ref|NP_633878.1| - 0.00023 21.1 1.0 0.036 14.0 0.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21227956|ref|NP_633878.1| - 0.00031 20.5 10.6 0.00055 19.7 7.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21227956|ref|NP_633878.1| - 0.00032 20.4 13.2 0.00076 19.2 9.3 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21227956|ref|NP_633878.1| - 0.00073 19.3 11.3 0.0062 16.3 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21227956|ref|NP_633878.1| - 0.017 15.4 0.5 0.017 15.4 0.4 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21227956|ref|NP_633878.1| - 0.21 12.1 0.3 0.21 12.1 0.2 3.2 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21227956|ref|NP_633878.1| - 2.2 8.7 13.0 0.85 10.0 0.5 3.3 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21227956|ref|NP_633878.1| - 3.6 8.3 14.9 0.1 13.2 2.8 3.0 2 1 0 2 2 2 0 4Fe-4S binding domain ABC_tran PF00005.22 gi|21227957|ref|NP_633879.1| - 2.7e-28 98.9 0.0 3.6e-28 98.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21227957|ref|NP_633879.1| - 2.3e-07 31.0 0.3 5.8e-06 26.4 0.2 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21227957|ref|NP_633879.1| - 0.00011 21.5 0.0 0.00024 20.4 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21227957|ref|NP_633879.1| - 0.015 14.8 0.0 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21227957|ref|NP_633879.1| - 0.072 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 ABC_tran PF00005.22 gi|21227958|ref|NP_633880.1| - 6.2e-22 78.3 0.0 8.1e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|21227958|ref|NP_633880.1| - 1.6e-15 57.2 0.7 3.2e-15 56.2 0.5 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_29 PF13555.1 gi|21227958|ref|NP_633880.1| - 0.0026 17.2 0.1 0.0055 16.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21227958|ref|NP_633880.1| - 0.0059 16.6 0.2 0.011 15.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|21227958|ref|NP_633880.1| - 0.008 16.3 0.1 0.029 14.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.16 gi|21227958|ref|NP_633880.1| - 0.019 14.1 0.1 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_21 PF13304.1 gi|21227958|ref|NP_633880.1| - 0.031 14.2 0.0 0.22 11.4 0.0 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|21227958|ref|NP_633880.1| - 0.032 13.6 0.0 0.08 12.3 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF258 PF03193.11 gi|21227958|ref|NP_633880.1| - 0.08 12.1 0.0 0.19 10.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function, DUF258 AAA PF00004.24 gi|21227958|ref|NP_633880.1| - 0.094 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.7 gi|21227958|ref|NP_633880.1| - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.14 gi|21227958|ref|NP_633880.1| - 0.15 11.3 0.0 0.49 9.5 0.0 1.7 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.17 gi|21227959|ref|NP_633881.1| - 2.3e-18 66.3 9.1 2.3e-18 66.3 6.3 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|21227959|ref|NP_633881.1| - 0.0068 15.7 0.1 0.027 13.8 0.1 2.0 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.17 gi|21227960|ref|NP_633882.1| - 7.5e-38 129.8 7.2 1.3e-37 129.1 5.0 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_YMGG PF13441.1 gi|21227960|ref|NP_633882.1| - 0.081 12.4 0.1 0.2 11.2 0.1 1.6 1 0 0 1 1 1 0 YMGG-like Gly-zipper SBP_bac_5 PF00496.17 gi|21227961|ref|NP_633883.1| - 1.3e-67 228.2 2.0 1.8e-67 227.8 1.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PHP PF02811.14 gi|21227962|ref|NP_633884.1| - 3.4e-05 23.6 0.0 5.4e-05 23.0 0.0 1.7 1 1 0 1 1 1 1 PHP domain PHP_C PF13263.1 gi|21227962|ref|NP_633884.1| - 0.03 13.8 0.0 0.061 12.8 0.0 1.6 1 0 0 1 1 1 0 PHP-associated EFhand_Ca_insen PF08726.5 gi|21227962|ref|NP_633884.1| - 0.03 14.3 0.0 0.076 12.9 0.0 1.7 1 0 0 1 1 1 0 Ca2+ insensitive EF hand Mrr_cat PF04471.7 gi|21227963|ref|NP_633885.1| - 8.4e-05 22.3 0.1 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease PDDEXK_4 PF14281.1 gi|21227963|ref|NP_633885.1| - 0.0033 17.3 0.0 0.0039 17.0 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF234 PF03008.9 gi|21227963|ref|NP_633885.1| - 0.043 13.9 0.3 0.091 12.8 0.2 1.6 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function Mrr_cat_2 PF13156.1 gi|21227963|ref|NP_633885.1| - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease MFS_1 PF07690.11 gi|21227964|ref|NP_633886.1| - 5.4e-50 170.0 31.9 5.4e-50 170.0 22.1 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|21227964|ref|NP_633886.1| - 1.4e-13 49.8 16.8 1.8e-13 49.5 11.6 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector OATP PF03137.15 gi|21227964|ref|NP_633886.1| - 0.001 17.2 0.9 0.001 17.2 0.6 3.8 2 2 2 4 4 4 1 Organic Anion Transporter Polypeptide (OATP) family DUF4407 PF14362.1 gi|21227964|ref|NP_633886.1| - 0.26 10.2 4.9 3.4 6.5 2.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) MarR PF01047.17 gi|21227965|ref|NP_633887.1| - 7.5e-13 47.9 0.0 1.4e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21227965|ref|NP_633887.1| - 6.7e-12 45.5 0.0 1.7e-11 44.2 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21227965|ref|NP_633887.1| - 3.2e-10 39.5 0.0 4.5e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21227965|ref|NP_633887.1| - 4.9e-06 25.8 0.0 9.8e-06 24.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|21227965|ref|NP_633887.1| - 9.7e-05 22.3 0.0 0.00022 21.1 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.7 gi|21227965|ref|NP_633887.1| - 0.00017 21.3 0.0 0.00033 20.4 0.0 1.5 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.14 gi|21227965|ref|NP_633887.1| - 0.00063 19.3 0.0 0.0015 18.1 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB RPA_C PF08784.6 gi|21227965|ref|NP_633887.1| - 0.0019 18.5 0.1 0.013 15.8 0.0 2.1 2 0 0 2 2 2 1 Replication protein A C terminal PadR PF03551.9 gi|21227965|ref|NP_633887.1| - 0.013 15.3 0.2 0.028 14.1 0.1 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|21227965|ref|NP_633887.1| - 0.024 14.4 0.1 0.053 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_Crp_2 PF13545.1 gi|21227965|ref|NP_633887.1| - 0.036 13.8 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_IclR PF09339.5 gi|21227965|ref|NP_633887.1| - 0.04 13.4 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain STN1_2 PF09170.5 gi|21227965|ref|NP_633887.1| - 0.045 13.5 0.4 0.069 12.9 0.1 1.4 2 0 0 2 2 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 GntR PF00392.16 gi|21227965|ref|NP_633887.1| - 0.046 13.1 0.0 0.081 12.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family RNA_pol_Rpc34 PF05158.7 gi|21227965|ref|NP_633887.1| - 0.055 12.6 0.0 0.071 12.2 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_36 PF13730.1 gi|21227965|ref|NP_633887.1| - 0.061 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.12 gi|21227965|ref|NP_633887.1| - 0.082 12.4 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HxlR PF01638.12 gi|21227965|ref|NP_633887.1| - 0.093 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Fe_dep_repress PF01325.14 gi|21227965|ref|NP_633887.1| - 0.1 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Tower PF09121.5 gi|21227965|ref|NP_633887.1| - 0.11 12.4 0.2 0.22 11.4 0.2 1.6 1 0 0 1 1 1 0 Tower Mrr_cat PF04471.7 gi|21227966|ref|NP_633888.1| - 0.0023 17.7 0.0 0.0034 17.1 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease PDDEXK_4 PF14281.1 gi|21227966|ref|NP_633888.1| - 0.02 14.7 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Somatostatin PF03002.10 gi|21227966|ref|NP_633888.1| - 0.42 10.2 2.1 0.9 9.2 1.5 1.5 1 0 0 1 1 1 0 Somatostatin/Cortistatin family Prefoldin_2 PF01920.15 gi|21227967|ref|NP_633889.1| - 6.6e-05 22.6 8.4 0.087 12.5 5.5 2.6 1 1 0 1 1 1 1 Prefoldin subunit GAS PF13851.1 gi|21227967|ref|NP_633889.1| - 0.00059 19.0 7.5 0.0026 16.9 1.3 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.5 gi|21227967|ref|NP_633889.1| - 0.00063 19.8 8.7 0.00079 19.5 6.1 1.2 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family IncA PF04156.9 gi|21227967|ref|NP_633889.1| - 0.00069 19.2 10.3 0.016 14.7 1.7 2.0 1 1 1 2 2 2 2 IncA protein FliJ PF02050.11 gi|21227967|ref|NP_633889.1| - 0.00097 19.1 0.8 0.004 17.2 0.1 1.9 1 1 1 2 2 2 1 Flagellar FliJ protein Hemerythrin PF01814.18 gi|21227967|ref|NP_633889.1| - 0.0011 19.1 0.2 0.0023 18.1 0.1 1.6 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain Spc7 PF08317.6 gi|21227967|ref|NP_633889.1| - 0.0015 17.2 12.3 0.0016 17.1 8.5 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Baculo_PEP_C PF04513.7 gi|21227967|ref|NP_633889.1| - 0.0021 17.9 4.6 2.7 7.8 0.1 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2730 PF10805.3 gi|21227967|ref|NP_633889.1| - 0.0029 17.3 4.4 0.0045 16.7 0.5 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2730) BLOC1_2 PF10046.4 gi|21227967|ref|NP_633889.1| - 0.0029 17.6 5.6 0.15 12.2 1.2 2.2 1 1 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cep57_MT_bd PF06657.8 gi|21227967|ref|NP_633889.1| - 0.0033 17.3 4.3 0.015 15.2 0.1 2.5 1 1 0 2 2 2 1 Centrosome microtubule-binding domain of Cep57 Tropomyosin_1 PF12718.2 gi|21227967|ref|NP_633889.1| - 0.0039 17.0 8.1 0.0069 16.2 5.6 1.4 1 1 0 1 1 1 1 Tropomyosin like CK2S PF15011.1 gi|21227967|ref|NP_633889.1| - 0.0052 16.5 1.0 0.0079 16.0 0.7 1.4 1 1 0 1 1 1 1 Casein Kinase 2 substrate Cluap1 PF10234.4 gi|21227967|ref|NP_633889.1| - 0.007 15.6 7.9 0.0088 15.2 5.5 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 DUF1664 PF07889.7 gi|21227967|ref|NP_633889.1| - 0.0075 16.0 6.0 0.54 10.0 4.2 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) FlaC_arch PF05377.6 gi|21227967|ref|NP_633889.1| - 0.012 15.5 12.7 0.9 9.4 4.0 3.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Herpes_UL6 PF01763.11 gi|21227967|ref|NP_633889.1| - 0.012 13.7 3.7 0.014 13.5 2.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like CAMP_factor PF07373.6 gi|21227967|ref|NP_633889.1| - 0.016 14.6 1.1 0.018 14.5 0.8 1.1 1 0 0 1 1 1 0 CAMP factor (Cfa) bZIP_1 PF00170.16 gi|21227967|ref|NP_633889.1| - 0.025 14.5 9.9 0.75 9.7 0.2 2.8 2 1 1 3 3 3 0 bZIP transcription factor Laminin_II PF06009.7 gi|21227967|ref|NP_633889.1| - 0.026 14.2 6.5 3.5 7.3 0.1 2.8 1 1 0 2 2 2 0 Laminin Domain II NPV_P10 PF05531.7 gi|21227967|ref|NP_633889.1| - 0.032 14.4 5.8 0.62 10.3 3.0 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Snapin_Pallidin PF14712.1 gi|21227967|ref|NP_633889.1| - 0.033 14.5 5.5 0.65 10.3 1.3 2.3 1 1 1 2 2 2 0 Snapin/Pallidin Spc24 PF08286.6 gi|21227967|ref|NP_633889.1| - 0.035 13.7 11.1 1.6 8.4 4.1 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF904 PF06005.7 gi|21227967|ref|NP_633889.1| - 0.038 14.2 10.4 0.74 10.1 0.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF904) Reo_sigmaC PF04582.7 gi|21227967|ref|NP_633889.1| - 0.039 13.1 3.3 0.059 12.5 2.3 1.2 1 0 0 1 1 1 0 Reovirus sigma C capsid protein TBPIP PF07106.8 gi|21227967|ref|NP_633889.1| - 0.041 13.4 11.5 0.54 9.7 0.5 2.1 1 1 1 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PspA_IM30 PF04012.7 gi|21227967|ref|NP_633889.1| - 0.043 13.1 1.0 0.21 10.8 0.7 1.9 1 1 0 1 1 1 0 PspA/IM30 family CP12 PF02672.10 gi|21227967|ref|NP_633889.1| - 0.051 14.0 0.2 1.3 9.5 0.1 2.3 1 1 1 2 2 2 0 CP12 domain Atg14 PF10186.4 gi|21227967|ref|NP_633889.1| - 0.051 12.5 6.2 0.15 10.9 4.2 1.8 1 1 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 Rab5-bind PF09311.6 gi|21227967|ref|NP_633889.1| - 0.053 13.4 3.1 0.28 11.0 0.0 2.2 1 1 0 2 2 2 0 Rabaptin-like protein DUF972 PF06156.8 gi|21227967|ref|NP_633889.1| - 0.059 13.7 7.8 3.3 8.0 3.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF972) WASH_WAHD PF11945.3 gi|21227967|ref|NP_633889.1| - 0.065 12.5 0.9 0.095 11.9 0.6 1.2 1 0 0 1 1 1 0 WAHD domain of WASH complex Med4 PF10018.4 gi|21227967|ref|NP_633889.1| - 0.066 12.6 7.5 1.1 8.6 1.1 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Vps51 PF08700.6 gi|21227967|ref|NP_633889.1| - 0.069 12.9 5.2 0.54 10.1 0.5 2.7 1 1 0 2 2 2 0 Vps51/Vps67 Rho_Binding PF08912.6 gi|21227967|ref|NP_633889.1| - 0.074 13.3 0.6 0.074 13.3 0.4 3.0 1 1 1 2 2 2 0 Rho Binding DUF4140 PF13600.1 gi|21227967|ref|NP_633889.1| - 0.078 13.4 4.0 2.6 8.5 0.1 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) AATF-Che1 PF13339.1 gi|21227967|ref|NP_633889.1| - 0.079 13.1 3.7 0.65 10.1 2.5 2.2 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor DUF1825 PF08855.5 gi|21227967|ref|NP_633889.1| - 0.082 12.9 2.3 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) ADIP PF11559.3 gi|21227967|ref|NP_633889.1| - 0.086 12.7 8.2 0.068 13.0 0.9 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding AAA_13 PF13166.1 gi|21227967|ref|NP_633889.1| - 0.089 11.2 9.1 0.26 9.7 6.3 1.6 1 1 0 1 1 1 0 AAA domain DUF948 PF06103.6 gi|21227967|ref|NP_633889.1| - 0.091 12.6 3.5 2.2 8.2 0.1 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Ax_dynein_light PF10211.4 gi|21227967|ref|NP_633889.1| - 0.093 12.5 9.1 0.2 11.4 1.0 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain DUF2968 PF11180.3 gi|21227967|ref|NP_633889.1| - 0.1 12.0 0.7 1.5 8.1 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Cob_adeno_trans PF01923.13 gi|21227967|ref|NP_633889.1| - 0.1 12.3 1.2 0.15 11.8 0.6 1.4 1 1 0 1 1 1 0 Cobalamin adenosyltransferase WXG100 PF06013.7 gi|21227967|ref|NP_633889.1| - 0.12 12.4 0.3 9.5 6.3 0.2 2.6 1 1 0 2 2 2 0 Proteins of 100 residues with WXG DUF4108 PF13390.1 gi|21227967|ref|NP_633889.1| - 0.12 12.0 2.9 0.18 11.5 1.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4108) DUF1843 PF08898.5 gi|21227967|ref|NP_633889.1| - 0.12 12.4 0.6 0.83 9.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) Sec34 PF04136.10 gi|21227967|ref|NP_633889.1| - 0.12 12.0 4.2 0.95 9.1 0.6 2.3 1 1 1 2 2 2 0 Sec34-like family CENP-F_leu_zip PF10473.4 gi|21227967|ref|NP_633889.1| - 0.15 11.9 11.4 0.95 9.3 0.4 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF869 PF05911.6 gi|21227967|ref|NP_633889.1| - 0.15 10.2 9.6 0.16 10.1 6.6 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF869) FliD_N PF02465.13 gi|21227967|ref|NP_633889.1| - 0.15 12.4 3.2 4.7 7.6 0.0 2.3 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF3829 PF12889.2 gi|21227967|ref|NP_633889.1| - 0.15 11.1 5.7 0.35 10.0 3.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) MitMem_reg PF13012.1 gi|21227967|ref|NP_633889.1| - 0.16 12.0 3.9 0.19 11.8 2.7 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function COG2 PF06148.6 gi|21227967|ref|NP_633889.1| - 0.16 11.8 5.1 2 8.3 2.2 2.5 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Prefoldin PF02996.12 gi|21227967|ref|NP_633889.1| - 0.16 11.5 8.1 49 3.6 5.6 2.9 1 1 0 1 1 1 0 Prefoldin subunit ACCA PF03255.9 gi|21227967|ref|NP_633889.1| - 0.19 11.2 3.2 1.5 8.3 0.2 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF489 PF04356.7 gi|21227967|ref|NP_633889.1| - 0.2 11.1 1.6 9 5.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF489) Zein-binding PF04576.10 gi|21227967|ref|NP_633889.1| - 0.25 11.4 2.8 0.77 9.9 1.1 2.2 1 1 1 2 2 2 0 Zein-binding CorA PF01544.13 gi|21227967|ref|NP_633889.1| - 0.28 10.1 8.1 1.3 8.0 1.0 2.4 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein FlxA PF14282.1 gi|21227967|ref|NP_633889.1| - 0.3 11.0 8.1 0.14 12.1 1.5 2.4 1 1 1 2 2 2 0 FlxA-like protein Orthopox_A5L PF06193.6 gi|21227967|ref|NP_633889.1| - 0.45 10.4 7.4 0.27 11.1 0.8 2.1 1 1 1 2 2 2 0 Orthopoxvirus A5L protein-like Syntaxin_2 PF14523.1 gi|21227967|ref|NP_633889.1| - 0.46 10.5 6.6 6.6 6.8 2.8 2.4 1 1 1 2 2 2 0 Syntaxin-like protein Bacillus_HBL PF05791.6 gi|21227967|ref|NP_633889.1| - 0.47 9.8 8.2 3.1 7.1 0.9 2.1 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) DUF1759 PF03564.10 gi|21227967|ref|NP_633889.1| - 0.5 10.1 4.2 0.79 9.5 2.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) DASH_Dam1 PF08653.5 gi|21227967|ref|NP_633889.1| - 0.66 9.7 3.5 18 5.2 1.0 3.3 2 2 0 2 2 2 0 DASH complex subunit Dam1 DNA_topoisoIV PF00521.15 gi|21227967|ref|NP_633889.1| - 0.73 8.6 8.0 0.84 8.4 5.5 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DASH_Dad3 PF08656.5 gi|21227967|ref|NP_633889.1| - 0.78 9.4 8.2 14 5.5 3.5 2.8 1 1 1 2 2 2 0 DASH complex subunit Dad3 DUF4200 PF13863.1 gi|21227967|ref|NP_633889.1| - 0.79 9.6 9.2 1.1 9.2 4.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DUF1319 PF07028.6 gi|21227967|ref|NP_633889.1| - 0.81 9.8 6.2 0.94 9.6 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) Syntaxin-6_N PF09177.6 gi|21227967|ref|NP_633889.1| - 0.91 9.9 5.6 1.2 9.5 0.6 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HalX PF08663.5 gi|21227967|ref|NP_633889.1| - 0.99 9.4 7.4 4.6 7.2 0.1 3.0 1 1 2 3 3 3 0 HalX domain GrpE PF01025.14 gi|21227967|ref|NP_633889.1| - 1.1 8.8 8.6 6.1 6.3 3.0 2.1 1 1 1 2 2 2 0 GrpE Occludin_ELL PF07303.8 gi|21227967|ref|NP_633889.1| - 1.2 9.9 4.3 3.8 8.3 1.1 2.1 1 1 1 2 2 2 0 Occludin homology domain ATG16 PF08614.6 gi|21227967|ref|NP_633889.1| - 1.2 8.8 11.5 8.2 6.2 5.2 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIVA PF05103.8 gi|21227967|ref|NP_633889.1| - 1.2 9.1 9.4 1.3 9.0 0.1 2.9 1 1 2 3 3 3 0 DivIVA protein DUF2762 PF10960.3 gi|21227967|ref|NP_633889.1| - 1.4 8.6 4.7 1.1 8.9 0.6 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2762) XhlA PF10779.4 gi|21227967|ref|NP_633889.1| - 1.7 8.6 10.9 1.2 9.1 2.9 2.5 1 1 1 2 2 2 0 Haemolysin XhlA UPF0184 PF03670.8 gi|21227967|ref|NP_633889.1| - 1.7 8.8 7.7 1.6 8.9 2.1 2.6 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0184) APG6 PF04111.7 gi|21227967|ref|NP_633889.1| - 2 7.3 9.4 9.1 5.2 5.2 1.9 1 1 0 1 1 1 0 Autophagy protein Apg6 DivIC PF04977.10 gi|21227967|ref|NP_633889.1| - 2.1 7.8 7.8 7.8 6.0 0.2 2.7 1 1 2 3 3 3 0 Septum formation initiator DUF342 PF03961.8 gi|21227967|ref|NP_633889.1| - 2.2 6.5 10.1 12 4.1 7.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF342) DUF4404 PF14357.1 gi|21227967|ref|NP_633889.1| - 2.4 8.6 8.5 21 5.6 1.3 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) Cep57_CLD_2 PF14197.1 gi|21227967|ref|NP_633889.1| - 3.6 7.6 8.4 4.2 7.3 0.4 2.6 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Rootletin PF15035.1 gi|21227967|ref|NP_633889.1| - 3.7 7.4 8.4 19 5.1 5.8 1.9 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion HR1 PF02185.11 gi|21227967|ref|NP_633889.1| - 6 6.6 10.0 2 8.2 0.8 2.9 2 1 0 2 2 2 0 Hr1 repeat Cortex-I_coil PF09304.5 gi|21227967|ref|NP_633889.1| - 6.1 6.9 12.6 28 4.8 2.5 2.2 1 1 1 2 2 2 0 Cortexillin I, coiled coil EMP24_GP25L PF01105.19 gi|21227967|ref|NP_633889.1| - 7.2 6.2 7.3 4.9 6.8 1.5 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Aerolysin PF01117.15 gi|21227968|ref|NP_633890.1| - 0.0025 16.8 1.3 0.0033 16.4 0.9 1.2 1 0 0 1 1 1 1 Aerolysin toxin Binary_toxB PF03495.9 gi|21227968|ref|NP_633890.1| - 0.41 9.2 8.0 0.3 9.6 4.5 1.4 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA MH1 PF03165.11 gi|21227969|ref|NP_633891.1| - 0.011 15.7 1.0 0.022 14.7 0.7 1.6 1 1 0 1 1 1 0 MH1 domain Plasmid_stabil PF05016.9 gi|21227969|ref|NP_633891.1| - 0.12 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Plasmid stabilisation system protein DUF2683 PF10884.3 gi|21227970|ref|NP_633892.1| - 5.8e-37 125.4 2.3 6.5e-37 125.3 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) NurA PF09376.5 gi|21227971|ref|NP_633893.1| - 7.1e-32 110.8 0.0 1e-31 110.3 0.0 1.2 1 0 0 1 1 1 1 NurA domain AAA_10 PF12846.2 gi|21227972|ref|NP_633894.1| - 5.6e-26 91.6 0.0 2.6e-24 86.2 0.0 2.1 1 1 0 1 1 1 1 AAA-like domain DUF87 PF01935.12 gi|21227972|ref|NP_633894.1| - 1e-10 41.8 0.0 2.3e-10 40.6 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF87 DUF853 PF05872.7 gi|21227972|ref|NP_633894.1| - 6.3e-07 28.1 0.0 0.0012 17.3 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_22 PF13401.1 gi|21227972|ref|NP_633894.1| - 2.9e-05 24.2 0.0 0.0047 17.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|21227972|ref|NP_633894.1| - 8.2e-05 22.1 0.0 0.045 13.2 0.0 2.2 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA PF00004.24 gi|21227972|ref|NP_633894.1| - 0.00098 19.3 1.9 0.52 10.5 0.0 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DEAD PF00270.24 gi|21227972|ref|NP_633894.1| - 0.0018 17.7 0.0 0.73 9.3 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase TrwB_AAD_bind PF10412.4 gi|21227972|ref|NP_633894.1| - 0.0021 16.7 0.0 0.0035 16.0 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.10 gi|21227972|ref|NP_633894.1| - 0.0041 16.9 0.0 0.076 12.8 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit RNA_helicase PF00910.17 gi|21227972|ref|NP_633894.1| - 0.0069 16.5 0.0 0.014 15.5 0.0 1.5 1 0 0 1 1 1 1 RNA helicase HAS-barrel PF09378.5 gi|21227972|ref|NP_633894.1| - 0.027 14.3 0.0 0.08 12.8 0.0 1.8 1 0 0 1 1 1 0 HAS barrel domain AAA_16 PF13191.1 gi|21227972|ref|NP_633894.1| - 0.028 14.4 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain T2SE PF00437.15 gi|21227972|ref|NP_633894.1| - 0.05 12.4 0.0 0.092 11.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Zot PF05707.7 gi|21227972|ref|NP_633894.1| - 0.059 12.8 0.1 0.17 11.3 0.0 1.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_33 PF13671.1 gi|21227972|ref|NP_633894.1| - 0.083 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain SopD PF11047.3 gi|21227972|ref|NP_633894.1| - 0.12 11.2 0.1 0.39 9.6 0.0 1.8 2 0 0 2 2 2 0 Salmonella outer protein D DUF2075 PF09848.4 gi|21227972|ref|NP_633894.1| - 0.13 11.1 0.0 0.85 8.5 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.21 gi|21227972|ref|NP_633894.1| - 0.16 11.4 0.0 0.28 10.6 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.12 gi|21227972|ref|NP_633894.1| - 0.2 11.0 0.0 0.37 10.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Flavoprotein PF02441.14 gi|21227973|ref|NP_633895.1| - 2.5e-31 108.0 0.1 3.3e-31 107.6 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein HD PF01966.17 gi|21227975|ref|NP_633897.1| - 1.2e-13 51.0 4.6 2.3e-12 46.9 0.6 2.8 2 1 1 3 3 3 2 HD domain UPF0052 PF01933.13 gi|21227976|ref|NP_633898.1| - 2.9e-58 197.5 0.0 4.1e-58 197.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 FmdE PF02663.9 gi|21227977|ref|NP_633899.1| - 2.5e-55 185.9 3.2 5.5e-25 87.7 0.0 4.3 4 0 0 4 4 4 4 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Cas_Csy3 PF09615.5 gi|21227977|ref|NP_633899.1| - 0.0045 16.1 0.3 2.1 7.3 0.0 2.2 2 0 0 2 2 2 2 CRISPR-associated protein (Cas_Csy3) Pribosyltran PF00156.22 gi|21227978|ref|NP_633900.1| - 5.5e-21 74.5 0.4 7.6e-21 74.1 0.3 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|21227978|ref|NP_633900.1| - 0.0001 21.5 0.0 0.00016 20.9 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|21227978|ref|NP_633900.1| - 0.00064 19.0 0.1 0.00096 18.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Diphthamide_syn PF01866.12 gi|21227979|ref|NP_633901.1| - 4.3e-105 351.3 0.0 4.9e-105 351.1 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.9 gi|21227980|ref|NP_633902.1| - 6.3e-15 54.9 0.0 8.3e-15 54.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|21227980|ref|NP_633902.1| - 2.7e-14 53.0 0.1 3.4e-14 52.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_26 PF13659.1 gi|21227980|ref|NP_633902.1| - 4.3e-12 46.0 0.0 5.8e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21227980|ref|NP_633902.1| - 6.1e-12 45.3 0.0 7.5e-12 45.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21227980|ref|NP_633902.1| - 1.9e-11 44.4 0.0 2.8e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21227980|ref|NP_633902.1| - 5.2e-09 35.9 0.0 6.1e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|21227980|ref|NP_633902.1| - 1.4e-07 31.7 0.0 2.4e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21227980|ref|NP_633902.1| - 6e-06 26.6 0.0 1.2e-05 25.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|21227980|ref|NP_633902.1| - 0.00021 20.9 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.1 gi|21227980|ref|NP_633902.1| - 0.00038 20.2 0.0 0.0006 19.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.1 gi|21227980|ref|NP_633902.1| - 0.0017 18.0 0.0 0.0021 17.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FmrO PF07091.6 gi|21227980|ref|NP_633902.1| - 0.0018 17.3 0.0 0.0026 16.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) PCMT PF01135.14 gi|21227980|ref|NP_633902.1| - 0.0027 17.2 0.0 0.0037 16.8 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.10 gi|21227980|ref|NP_633902.1| - 0.003 16.9 0.0 0.004 16.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|21227980|ref|NP_633902.1| - 0.003 17.1 0.0 0.0047 16.5 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Ubie_methyltran PF01209.13 gi|21227980|ref|NP_633902.1| - 0.0037 16.4 0.0 0.0049 16.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21227980|ref|NP_633902.1| - 0.02 15.3 0.1 0.086 13.3 0.1 2.0 2 1 0 2 2 1 0 Methyltransferase domain DUF43 PF01861.11 gi|21227980|ref|NP_633902.1| - 0.033 13.1 0.0 0.051 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF43 ECR1_N PF14382.1 gi|21227981|ref|NP_633903.1| - 4.8e-09 35.3 0.8 8.8e-09 34.5 0.1 1.8 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.4 gi|21227981|ref|NP_633903.1| - 3.3e-05 23.7 1.4 3.3e-05 23.7 1.0 2.8 2 1 1 3 3 3 1 Exosome component EXOSC1/CSL4 S1 PF00575.18 gi|21227981|ref|NP_633903.1| - 0.011 15.7 7.6 0.52 10.4 0.6 2.9 3 0 0 3 3 3 0 S1 RNA binding domain HypA PF01155.14 gi|21227981|ref|NP_633903.1| - 0.014 15.0 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family ALS_ss_C PF10369.4 gi|21227981|ref|NP_633903.1| - 0.016 14.9 2.3 2 8.2 0.1 3.1 1 1 2 3 3 3 0 Small subunit of acetolactate synthase zf-C3HC4_3 PF13920.1 gi|21227981|ref|NP_633903.1| - 0.17 11.5 1.8 0.27 10.9 1.2 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_pol_L_2 PF13656.1 gi|21227982|ref|NP_633904.1| - 3.2e-20 71.3 0.1 3.8e-20 71.1 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.19 gi|21227982|ref|NP_633904.1| - 0.00083 18.4 0.0 0.002 17.1 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain SLA_LP_auto_ag PF05889.8 gi|21227983|ref|NP_633905.1| - 2e-56 191.1 0.0 3.8e-56 190.2 0.0 1.4 1 1 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Aminotran_5 PF00266.14 gi|21227983|ref|NP_633905.1| - 1.4e-15 56.9 0.0 2e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|21227983|ref|NP_633905.1| - 8.5e-10 38.1 0.0 1.2e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Pyridoxal_deC PF00282.14 gi|21227983|ref|NP_633905.1| - 0.0012 17.3 0.0 0.0019 16.7 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.16 gi|21227983|ref|NP_633905.1| - 0.0023 17.1 0.0 0.0031 16.7 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.15 gi|21227983|ref|NP_633905.1| - 0.0044 15.6 0.0 0.013 14.0 0.0 1.6 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DegT_DnrJ_EryC1 PF01041.12 gi|21227983|ref|NP_633905.1| - 0.014 14.4 0.0 0.028 13.4 0.0 1.4 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family HTH_20 PF12840.2 gi|21227984|ref|NP_633906.1| - 1.5e-06 27.8 0.0 2.2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|21227984|ref|NP_633906.1| - 5.1e-06 26.4 0.0 7.3e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|21227984|ref|NP_633906.1| - 0.00037 20.1 0.0 0.00053 19.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|21227984|ref|NP_633906.1| - 0.0031 17.3 0.1 0.0053 16.5 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.14 gi|21227984|ref|NP_633906.1| - 0.015 15.0 0.0 0.043 13.5 0.0 1.8 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|21227984|ref|NP_633906.1| - 0.018 14.4 0.1 0.047 13.0 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21227984|ref|NP_633906.1| - 0.067 13.5 0.0 0.37 11.1 0.0 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain tRNA_bind_2 PF13725.1 gi|21227984|ref|NP_633906.1| - 0.069 13.2 0.0 0.089 12.9 0.0 1.2 1 0 0 1 1 1 0 Possible tRNA binding domain VASP_tetra PF08776.6 gi|21227984|ref|NP_633906.1| - 0.14 11.5 1.2 0.35 10.2 0.9 1.7 1 0 0 1 1 1 0 VASP tetramerisation domain DUF2148 PF09918.4 gi|21227985|ref|NP_633907.1| - 6.4e-36 121.8 1.3 6.4e-36 121.8 0.9 1.9 2 0 0 2 2 2 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.8 gi|21227985|ref|NP_633907.1| - 0.00013 21.4 0.8 0.00028 20.4 0.6 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster zf-UDP PF14569.1 gi|21227985|ref|NP_633907.1| - 0.054 13.2 0.1 0.093 12.4 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger Y1_Tnp PF01797.11 gi|21227986|ref|NP_633908.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like Orn_Arg_deC_N PF02784.11 gi|21227987|ref|NP_633909.1| - 3.6e-38 131.1 0.0 4.4e-38 130.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|21227987|ref|NP_633909.1| - 4e-16 58.7 0.0 5.9e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HAD PF12710.2 gi|21227988|ref|NP_633910.1| - 2.2e-15 57.3 0.0 2.9e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21227988|ref|NP_633910.1| - 0.0074 16.7 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21227988|ref|NP_633910.1| - 0.017 14.7 0.5 0.098 12.2 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase 2_5_RNA_ligase2 PF13563.1 gi|21227989|ref|NP_633911.1| - 1.2e-05 25.0 0.0 2.6e-05 23.9 0.0 1.4 1 1 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.11 gi|21227989|ref|NP_633911.1| - 0.0015 18.4 0.1 0.044 13.7 0.0 2.3 2 0 0 2 2 2 1 LigT like Phosphoesterase DUF4277 PF14104.1 gi|21227990|ref|NP_633912.1| - 7.2e-41 138.9 0.0 1.6e-40 137.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21227990|ref|NP_633912.1| - 4.3e-10 39.4 0.1 5.2e-09 35.9 0.0 2.2 1 1 0 1 1 1 1 Transposase DDE domain DUF308 PF03729.8 gi|21227991|ref|NP_633913.1| - 5.3e-06 26.3 20.1 0.019 14.9 5.8 3.2 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) DoxX_3 PF13781.1 gi|21227991|ref|NP_633913.1| - 0.41 11.0 0.1 0.41 11.0 0.1 3.2 2 1 1 3 3 3 0 DoxX-like family Bax1-I PF01027.15 gi|21227991|ref|NP_633913.1| - 2 7.9 15.1 13 5.2 10.4 2.0 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 7TMR-DISM_7TM PF07695.6 gi|21227991|ref|NP_633913.1| - 3.6 7.2 19.6 1.3 8.6 8.0 2.2 1 1 1 2 2 2 0 7TM diverse intracellular signalling MS_channel PF00924.13 gi|21227992|ref|NP_633914.1| - 8.1e-44 149.4 1.9 1.5e-43 148.5 1.3 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel Phage_holin_2 PF04550.7 gi|21227992|ref|NP_633914.1| - 0.0086 16.1 0.7 0.017 15.1 0.5 1.5 1 0 0 1 1 1 1 Phage holin family 2 PepSY_TM_2 PF13703.1 gi|21227992|ref|NP_633914.1| - 5.6 7.2 7.8 2.1 8.5 0.7 3.1 2 1 0 3 3 3 0 PepSY-associated TM helix Na_H_Exchanger PF00999.16 gi|21227993|ref|NP_633915.1| - 3.4e-30 104.8 50.7 4e-30 104.5 35.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Form-deh_trans PF09163.6 gi|21227993|ref|NP_633915.1| - 0.012 15.1 1.6 0.091 12.2 0.6 2.8 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Ldr_toxin PF13940.1 gi|21227993|ref|NP_633915.1| - 0.88 9.3 4.3 13 5.7 0.9 3.8 3 0 0 3 3 3 0 Toxin Ldr, type I toxin-antitoxin system Sulfatase PF00884.18 gi|21227994|ref|NP_633916.1| - 3e-63 213.8 0.0 4.7e-63 213.2 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.1 gi|21227994|ref|NP_633916.1| - 2e-07 31.3 0.0 4.8e-07 30.1 0.0 1.6 1 1 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.17 gi|21227994|ref|NP_633916.1| - 5.7e-06 25.9 0.2 0.00015 21.1 0.2 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Radical_SAM PF04055.16 gi|21227995|ref|NP_633917.1| - 3.8e-14 53.2 0.0 5.6e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SEC-C PF02810.10 gi|21227995|ref|NP_633917.1| - 6.9e-11 41.4 6.0 1.3e-10 40.5 4.2 1.5 1 0 0 1 1 1 1 SEC-C motif SPASM PF13186.1 gi|21227995|ref|NP_633917.1| - 3.9e-08 33.5 0.1 1.2e-07 31.9 0.1 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|21227995|ref|NP_633917.1| - 1.5e-07 31.5 0.0 2.6e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21227995|ref|NP_633917.1| - 3.2e-05 23.9 0.0 5.7e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain DNA_pol_B_thumb PF14791.1 gi|21227996|ref|NP_633918.1| - 1.3e-26 92.0 0.1 4.5e-26 90.3 0.1 2.0 1 0 0 1 1 1 1 DNA polymerase beta thumb HHH_8 PF14716.1 gi|21227996|ref|NP_633918.1| - 7.5e-19 67.6 5.6 1.5e-18 66.7 0.3 3.6 3 1 1 4 4 4 1 Helix-hairpin-helix domain PHP PF02811.14 gi|21227996|ref|NP_633918.1| - 8.8e-16 58.1 0.1 2.6e-15 56.6 0.1 1.9 1 0 0 1 1 1 1 PHP domain HHH_5 PF14520.1 gi|21227996|ref|NP_633918.1| - 3.4e-11 43.1 4.4 1.6e-06 28.1 0.3 3.5 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|21227996|ref|NP_633918.1| - 4e-05 23.4 0.8 0.0083 15.9 0.0 3.1 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH PF00633.18 gi|21227996|ref|NP_633918.1| - 0.00026 20.5 1.7 0.012 15.2 0.1 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|21227996|ref|NP_633918.1| - 0.00054 19.8 0.7 1.2 9.1 0.0 3.3 3 0 0 3 3 3 2 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.1 gi|21227996|ref|NP_633918.1| - 0.0015 18.5 0.0 0.0042 17.1 0.0 1.8 1 0 0 1 1 1 1 DNA polymerase beta palm DUF3701 PF12482.3 gi|21227996|ref|NP_633918.1| - 0.026 14.2 0.0 5 6.9 0.0 2.6 2 0 0 2 2 2 0 Phage integrase protein IMS_HHH PF11798.3 gi|21227996|ref|NP_633918.1| - 0.064 13.3 0.3 5.2 7.3 0.0 3.3 3 0 0 3 3 3 0 IMS family HHH motif DNA_ligase_A_M PF01068.16 gi|21227997|ref|NP_633919.1| - 5e-51 172.9 2.2 8.4e-51 172.2 1.5 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|21227997|ref|NP_633919.1| - 3.9e-49 166.8 1.4 1.9e-48 164.6 0.3 2.4 3 0 0 3 3 3 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|21227997|ref|NP_633919.1| - 6.8e-23 80.9 0.0 2.3e-22 79.2 0.0 2.0 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.1 gi|21227997|ref|NP_633919.1| - 5.6e-06 25.9 0.2 0.0021 17.6 0.0 2.6 2 0 0 2 2 2 2 DNA ligase OB-like domain 4HBT PF03061.17 gi|21227998|ref|NP_633920.1| - 9.1e-12 44.9 0.0 1.4e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.1 gi|21227998|ref|NP_633920.1| - 4e-05 23.5 0.2 7.4e-05 22.7 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) Pep_deformylase PF01327.16 gi|21227998|ref|NP_633920.1| - 0.008 15.5 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 Polypeptide deformylase 4HBT_3 PF13622.1 gi|21227998|ref|NP_633920.1| - 0.029 14.1 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily FCH PF00611.18 gi|21227998|ref|NP_633920.1| - 0.035 14.3 0.0 0.056 13.6 0.0 1.4 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain DUF4430 PF14478.1 gi|21227999|ref|NP_633921.1| - 2.7e-08 33.7 1.1 2.7e-08 33.7 0.7 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4430) Ion_trans_2 PF07885.11 gi|21228000|ref|NP_633922.1| - 2.5e-06 27.1 8.2 2.5e-06 27.1 5.7 1.8 2 0 0 2 2 2 1 Ion channel Lig_chan PF00060.21 gi|21228000|ref|NP_633922.1| - 4.6e-06 26.4 0.5 7.9e-06 25.6 0.3 1.6 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.26 gi|21228000|ref|NP_633922.1| - 0.013 14.7 24.2 0.018 14.3 13.0 2.9 2 1 0 2 2 2 0 Ion transport protein 7tm_7 PF08395.7 gi|21228000|ref|NP_633922.1| - 0.048 12.6 7.9 0.21 10.5 0.7 2.7 2 1 0 2 2 2 0 7tm Chemosensory receptor HDOD PF08668.7 gi|21228000|ref|NP_633922.1| - 0.1 11.8 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 HDOD domain ASFV_J13L PF05568.6 gi|21228000|ref|NP_633922.1| - 0.12 11.8 0.7 0.18 11.3 0.5 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein DivIC PF04977.10 gi|21228000|ref|NP_633922.1| - 0.38 10.2 0.1 0.38 10.2 0.1 2.4 3 0 0 3 3 3 0 Septum formation initiator DUF2207 PF09972.4 gi|21228000|ref|NP_633922.1| - 1.8 7.0 9.6 0.8 8.2 1.2 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) RPAP1_N PF08621.5 gi|21228000|ref|NP_633922.1| - 2.3 7.8 5.7 0.44 10.1 1.3 1.8 2 0 0 2 2 2 0 RPAP1-like, N-terminal DUF1270 PF06900.6 gi|21228001|ref|NP_633923.1| - 0.13 12.4 1.1 0.14 12.2 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) Ferric_reduct PF01794.14 gi|21228002|ref|NP_633924.1| - 1.1e-05 25.4 9.7 2.4e-05 24.4 6.7 1.6 1 0 0 1 1 1 1 Ferric reductase like transmembrane component DUF70 PF01901.11 gi|21228002|ref|NP_633924.1| - 0.076 12.0 11.2 0.091 11.7 7.3 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF70 DUF1516 PF07457.6 gi|21228002|ref|NP_633924.1| - 0.51 10.4 12.5 0.74 9.9 1.7 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1516) DUF3397 PF11877.3 gi|21228002|ref|NP_633924.1| - 2.3 8.2 11.2 0.083 12.8 1.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3397) O-antigen_lig PF13425.1 gi|21228002|ref|NP_633924.1| - 6 6.8 15.2 0.31 11.0 3.8 2.6 1 1 1 2 2 2 0 O-antigen ligase like membrane protein Acetyltransf_4 PF13420.1 gi|21228004|ref|NP_633926.1| - 1.3e-20 73.9 0.0 1.5e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21228004|ref|NP_633926.1| - 5.3e-12 46.0 0.0 6.2e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228004|ref|NP_633926.1| - 2.1e-10 40.5 0.0 3.1e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21228004|ref|NP_633926.1| - 1.8e-08 34.4 0.0 2.9e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21228004|ref|NP_633926.1| - 1.9e-05 24.5 0.0 2.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21228004|ref|NP_633926.1| - 7.6e-05 22.8 0.0 8.4e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21228004|ref|NP_633926.1| - 0.024 14.3 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.1 gi|21228004|ref|NP_633926.1| - 0.075 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MarR PF01047.17 gi|21228005|ref|NP_633927.1| - 1.9e-12 46.7 0.0 3.5e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|21228005|ref|NP_633927.1| - 2e-08 33.7 0.0 3.4e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|21228005|ref|NP_633927.1| - 4.2e-08 33.1 0.0 7.5e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.1 gi|21228005|ref|NP_633927.1| - 1.8e-07 31.3 0.0 3.3e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|21228005|ref|NP_633927.1| - 1.4e-06 28.1 0.6 2.6e-06 27.2 0.1 1.6 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.1 gi|21228005|ref|NP_633927.1| - 6.8e-06 25.3 0.0 1.4e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|21228005|ref|NP_633927.1| - 3.1e-05 23.5 0.2 0.00013 21.6 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FeoC PF09012.5 gi|21228005|ref|NP_633927.1| - 0.0023 17.5 0.2 0.0051 16.4 0.0 1.6 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_20 PF12840.2 gi|21228005|ref|NP_633927.1| - 0.0024 17.6 0.0 0.0085 15.8 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|21228005|ref|NP_633927.1| - 0.0024 17.4 0.0 0.0044 16.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.12 gi|21228005|ref|NP_633927.1| - 0.0038 16.8 0.0 0.0057 16.2 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Rrf2 PF02082.15 gi|21228005|ref|NP_633927.1| - 0.0066 16.5 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.5 gi|21228005|ref|NP_633927.1| - 0.012 15.1 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain PadR PF03551.9 gi|21228005|ref|NP_633927.1| - 0.019 14.7 0.0 0.046 13.4 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_36 PF13730.1 gi|21228005|ref|NP_633927.1| - 0.023 14.8 0.0 0.05 13.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|21228005|ref|NP_633927.1| - 0.026 14.3 0.0 0.05 13.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_1 PF00126.22 gi|21228005|ref|NP_633927.1| - 0.029 14.1 0.0 0.063 13.0 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family CRS1_YhbY PF01985.16 gi|21228005|ref|NP_633927.1| - 0.032 14.2 0.1 0.063 13.2 0.1 1.5 1 0 0 1 1 1 0 CRS1 / YhbY (CRM) domain HTH_45 PF14947.1 gi|21228005|ref|NP_633927.1| - 0.034 13.9 0.1 0.07 12.9 0.0 1.6 2 0 0 2 2 1 0 Winged helix-turn-helix HTH_11 PF08279.7 gi|21228005|ref|NP_633927.1| - 0.05 13.2 0.1 0.11 12.1 0.0 1.6 2 0 0 2 2 1 0 HTH domain DUF2250 PF10007.4 gi|21228005|ref|NP_633927.1| - 0.064 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) B-block_TFIIIC PF04182.7 gi|21228005|ref|NP_633927.1| - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_10 PF04967.7 gi|21228005|ref|NP_633927.1| - 0.12 11.9 0.3 0.4 10.2 0.1 1.9 2 0 0 2 2 2 0 HTH DNA binding domain DUF4423 PF14394.1 gi|21228005|ref|NP_633927.1| - 0.13 11.7 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Rhodanese PF00581.15 gi|21228006|ref|NP_633928.1| - 1e-22 80.6 0.0 1.2e-22 80.3 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2238 PF09997.4 gi|21228007|ref|NP_633929.1| - 0.00092 18.6 6.1 0.0011 18.3 3.1 2.0 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) DUF3180 PF11377.3 gi|21228007|ref|NP_633929.1| - 0.18 11.6 1.7 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3180) DUF2637 PF10935.3 gi|21228007|ref|NP_633929.1| - 0.54 10.1 2.9 0.71 9.8 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) DUF1129 PF06570.6 gi|21228007|ref|NP_633929.1| - 9.6 5.4 12.0 6.9 5.9 1.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF2769 PF10967.3 gi|21228008|ref|NP_633930.1| - 3.6e-08 33.5 12.5 1.3e-05 25.4 3.0 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF2769) Whib PF02467.11 gi|21228008|ref|NP_633930.1| - 0.019 15.2 6.1 0.036 14.3 0.3 2.4 2 0 0 2 2 2 0 Transcription factor WhiB Isochorismatase PF00857.15 gi|21228009|ref|NP_633931.1| - 1.7e-41 142.0 0.0 1.9e-41 141.8 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DJ-1_PfpI PF01965.19 gi|21228009|ref|NP_633931.1| - 0.12 11.8 0.4 0.36 10.2 0.0 1.9 2 1 0 2 2 2 0 DJ-1/PfpI family ICMT PF04140.9 gi|21228010|ref|NP_633932.1| - 1.9e-20 72.8 0.2 2.6e-20 72.3 0.1 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.8 gi|21228010|ref|NP_633932.1| - 3.1e-15 56.1 0.2 3.7e-15 55.9 0.1 1.1 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF1295 PF06966.7 gi|21228010|ref|NP_633932.1| - 0.00024 20.4 0.1 0.0003 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) ERG4_ERG24 PF01222.12 gi|21228010|ref|NP_633932.1| - 0.071 11.6 0.1 0.078 11.5 0.1 1.2 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family Na_H_Exchanger PF00999.16 gi|21228011|ref|NP_633933.1| - 6.1e-77 258.6 48.8 8.6e-77 258.2 33.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|21228011|ref|NP_633933.1| - 5.3e-21 74.7 0.2 8.9e-21 74.0 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|21228011|ref|NP_633933.1| - 6.1e-11 41.7 0.0 2e-10 40.0 0.0 2.0 1 0 0 1 1 1 1 TrkA-C domain Maf PF02545.9 gi|21228012|ref|NP_633934.1| - 3.9e-51 172.9 0.0 4.7e-51 172.6 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein tRNA-synt_1e PF01406.14 gi|21228013|ref|NP_633935.1| - 1.7e-104 349.2 0.0 2.2e-104 348.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|21228013|ref|NP_633935.1| - 1.8e-17 63.0 0.1 4.8e-08 32.0 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.6 gi|21228013|ref|NP_633935.1| - 2.6e-15 56.4 0.0 5.6e-15 55.3 0.0 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.13 gi|21228013|ref|NP_633935.1| - 5.5e-12 45.0 0.0 6.3e-06 25.1 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.17 gi|21228013|ref|NP_633935.1| - 1.3e-09 36.6 0.2 1.1e-06 27.0 0.0 2.5 3 0 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1d PF00750.14 gi|21228013|ref|NP_633935.1| - 0.0029 16.4 0.0 0.55 8.9 0.0 2.9 2 1 1 3 3 3 1 tRNA synthetases class I (R) tRNA-synt_1c PF00749.16 gi|21228013|ref|NP_633935.1| - 0.012 14.2 0.0 0.034 12.7 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain DUF768 PF05589.6 gi|21228013|ref|NP_633935.1| - 0.028 14.3 0.8 0.61 10.0 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF768) Lon_C PF05362.8 gi|21228015|ref|NP_633937.1| - 1.7e-09 37.2 3.8 4e-09 36.0 1.1 2.1 1 1 1 2 2 2 1 Lon protease (S16) C-terminal proteolytic domain Med4 PF10018.4 gi|21228015|ref|NP_633937.1| - 0.0044 16.4 0.0 0.007 15.7 0.0 1.3 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 Mod_r PF07200.8 gi|21228015|ref|NP_633937.1| - 0.0091 15.9 0.6 0.014 15.3 0.4 1.2 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein TBPIP PF07106.8 gi|21228015|ref|NP_633937.1| - 0.0097 15.4 0.4 0.014 14.9 0.3 1.2 1 0 0 1 1 1 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Filament PF00038.16 gi|21228015|ref|NP_633937.1| - 0.021 14.3 1.7 0.029 13.8 1.2 1.1 1 0 0 1 1 1 0 Intermediate filament protein ATG16 PF08614.6 gi|21228015|ref|NP_633937.1| - 0.027 14.2 1.3 0.043 13.6 0.9 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Cluap1 PF10234.4 gi|21228015|ref|NP_633937.1| - 0.032 13.4 0.4 0.052 12.7 0.3 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 Herpes_UL6 PF01763.11 gi|21228015|ref|NP_633937.1| - 0.043 12.0 0.1 0.058 11.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like TSC22 PF01166.13 gi|21228015|ref|NP_633937.1| - 0.055 13.4 4.2 0.11 12.4 2.0 2.0 1 1 1 2 2 2 0 TSC-22/dip/bun family DUF2547 PF10818.3 gi|21228015|ref|NP_633937.1| - 0.058 14.0 0.9 0.12 13.0 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) XhlA PF10779.4 gi|21228015|ref|NP_633937.1| - 0.067 13.1 1.1 0.15 12.0 0.7 1.5 1 0 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.10 gi|21228015|ref|NP_633937.1| - 0.073 12.5 2.0 0.15 11.5 1.4 1.5 1 0 0 1 1 1 0 Septum formation initiator IncA PF04156.9 gi|21228015|ref|NP_633937.1| - 0.11 12.0 7.2 0.28 10.7 5.0 1.6 1 1 0 1 1 1 0 IncA protein DUF812 PF05667.6 gi|21228015|ref|NP_633937.1| - 0.21 10.0 2.2 0.28 9.6 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) BLOC1_2 PF10046.4 gi|21228015|ref|NP_633937.1| - 0.29 11.2 3.7 0.18 11.9 0.9 1.8 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 bZIP_2 PF07716.10 gi|21228015|ref|NP_633937.1| - 0.34 10.7 5.5 0.75 9.6 3.8 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Metallophos PF00149.23 gi|21228016|ref|NP_633938.1| - 1.8e-06 27.4 0.2 2.3e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|21228016|ref|NP_633938.1| - 2.6e-05 24.1 0.0 3.4e-05 23.7 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DNA_pol_E_B PF04042.11 gi|21228016|ref|NP_633938.1| - 0.0078 15.4 0.0 0.017 14.3 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Tubulin-binding PF00418.14 gi|21228016|ref|NP_633938.1| - 0.047 13.3 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Tau and MAP protein, tubulin-binding repeat PocR PF10114.4 gi|21228017|ref|NP_633939.1| - 2.7e-69 231.7 0.3 2.6e-68 228.5 0.0 2.3 2 0 0 2 2 2 1 Sensory domain found in PocR HisKA_2 PF07568.7 gi|21228017|ref|NP_633939.1| - 3e-32 110.3 0.9 3e-32 110.3 0.6 2.1 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|21228017|ref|NP_633939.1| - 6.8e-18 64.9 0.0 1.6e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|21228017|ref|NP_633939.1| - 1.2e-16 60.4 0.0 2.7e-16 59.3 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|21228017|ref|NP_633939.1| - 2.1e-11 43.5 0.1 6.2e-11 42.0 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|21228017|ref|NP_633939.1| - 8.7e-10 38.6 0.0 1.6e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|21228017|ref|NP_633939.1| - 1.1e-08 34.6 0.0 5.4e-08 32.4 0.0 2.3 2 0 0 2 2 1 1 PAS domain PAS_10 PF13596.1 gi|21228017|ref|NP_633939.1| - 2.8e-06 27.5 0.0 8.7e-06 25.9 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.6 gi|21228017|ref|NP_633939.1| - 4.8e-05 23.3 0.0 0.00021 21.3 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.2 gi|21228017|ref|NP_633939.1| - 0.00016 21.6 0.1 0.0032 17.4 0.0 2.8 2 1 0 2 2 2 1 PAS fold HWE_HK PF07536.9 gi|21228017|ref|NP_633939.1| - 0.0025 18.2 0.5 0.0087 16.4 0.3 2.0 1 1 0 1 1 1 1 HWE histidine kinase HATPase_c_3 PF13589.1 gi|21228017|ref|NP_633939.1| - 0.017 14.8 0.0 0.038 13.6 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Latarcin PF10279.4 gi|21228017|ref|NP_633939.1| - 0.046 13.9 0.0 40 4.4 0.0 3.6 2 1 0 2 2 2 0 Latarcin precursor tRNA-synt_2 PF00152.15 gi|21228018|ref|NP_633940.1| - 4.2e-99 331.5 1.1 5.1e-99 331.2 0.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|21228018|ref|NP_633940.1| - 3.9e-14 52.2 0.1 7.4e-14 51.3 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|21228018|ref|NP_633940.1| - 3.3e-07 29.7 0.2 0.0025 17.0 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DEAD_assoc PF08494.6 gi|21228019|ref|NP_633941.1| - 1.4e-42 145.5 0.0 2.4e-42 144.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|21228019|ref|NP_633941.1| - 2.3e-32 111.7 0.0 1.9e-31 108.8 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21228019|ref|NP_633941.1| - 4.2e-18 64.9 0.1 3.8e-16 58.7 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|21228019|ref|NP_633941.1| - 2.6e-06 27.4 0.0 6.2e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|21228019|ref|NP_633941.1| - 0.00041 19.2 0.0 0.00075 18.3 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Rep_4 PF05797.6 gi|21228019|ref|NP_633941.1| - 0.0048 15.6 0.0 0.0094 14.6 0.0 1.4 1 0 0 1 1 1 1 Yeast trans-acting factor (REP1/REP2) T4SS-DNA_transf PF02534.9 gi|21228019|ref|NP_633941.1| - 0.033 12.7 0.0 0.071 11.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer UvrD-helicase PF00580.16 gi|21228019|ref|NP_633941.1| - 0.039 13.2 0.0 0.18 11.0 0.0 1.9 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_22 PF13401.1 gi|21228019|ref|NP_633941.1| - 0.11 12.6 0.4 0.87 9.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain Ribosomal_S13 PF00416.17 gi|21228019|ref|NP_633941.1| - 0.12 12.8 1.2 2.5 8.5 0.0 3.0 2 1 1 3 3 3 0 Ribosomal protein S13/S18 Zn-ribbon_8 PF09723.5 gi|21228019|ref|NP_633941.1| - 0.14 12.0 0.5 0.29 11.1 0.4 1.5 1 0 0 1 1 1 0 Zinc ribbon domain SIR2_2 PF13289.1 gi|21228020|ref|NP_633942.1| - 7e-11 42.1 3.2 1.5e-10 41.0 0.0 3.0 3 0 0 3 3 3 1 SIR2-like domain IstB_IS21 PF01695.12 gi|21228020|ref|NP_633942.1| - 3.6e-06 26.5 0.0 1.2e-05 24.7 0.0 1.9 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.24 gi|21228020|ref|NP_633942.1| - 0.039 14.1 0.0 0.14 12.3 0.0 2.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) UPF0150 PF03681.10 gi|21228021|ref|NP_633943.1| - 1e-19 69.8 0.1 1.1e-19 69.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|21228021|ref|NP_633943.1| - 4.4e-06 26.1 0.0 4.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) DUF3832 PF12909.2 gi|21228021|ref|NP_633943.1| - 0.047 13.7 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) NTP_transf_2 PF01909.18 gi|21228022|ref|NP_633944.1| - 4.8e-19 68.4 0.8 5.6e-19 68.2 0.5 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21228022|ref|NP_633944.1| - 0.0013 18.7 0.0 0.0013 18.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm PAC2 PF09754.4 gi|21228022|ref|NP_633944.1| - 0.043 13.6 0.0 0.044 13.6 0.0 1.1 1 0 0 1 1 1 0 PAC2 family DUF3467 PF11950.3 gi|21228023|ref|NP_633945.1| - 4.1e-10 39.5 0.3 5.3e-10 39.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) BssS PF13991.1 gi|21228023|ref|NP_633945.1| - 0.0027 17.4 0.1 0.016 14.9 0.0 2.0 2 0 0 2 2 2 1 BssS protein family HTH_Crp_2 PF13545.1 gi|21228024|ref|NP_633946.1| - 0.0029 17.3 0.0 0.0054 16.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.14 gi|21228024|ref|NP_633946.1| - 0.046 13.4 0.0 0.082 12.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|21228024|ref|NP_633946.1| - 0.1 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 HTH domain UPF0150 PF03681.10 gi|21228025|ref|NP_633947.1| - 2.1e-19 68.8 0.1 2.7e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|21228025|ref|NP_633947.1| - 5.2e-06 25.9 0.0 6.4e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) DUF3832 PF12909.2 gi|21228025|ref|NP_633947.1| - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) YcfA PF07927.7 gi|21228026|ref|NP_633948.1| - 2e-20 72.4 0.1 2.6e-20 72.0 0.1 1.2 1 0 0 1 1 1 1 YcfA-like protein DUF1232 PF06803.7 gi|21228027|ref|NP_633949.1| - 3.5e-14 51.9 6.8 5e-14 51.4 4.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Filamin PF00630.14 gi|21228028|ref|NP_633950.1| - 0.00022 21.7 0.0 0.00031 21.2 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat GldH_lipo PF14109.1 gi|21228028|ref|NP_633950.1| - 0.0062 16.7 0.0 0.49 10.6 0.0 2.1 1 1 1 2 2 2 2 GldH lipoprotein PPC PF04151.10 gi|21228028|ref|NP_633950.1| - 0.029 15.3 0.1 0.076 13.9 0.0 1.8 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain Mfa2 PF08842.5 gi|21228028|ref|NP_633950.1| - 0.043 13.1 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 NosD PF05048.8 gi|21228029|ref|NP_633951.1| - 1.1e-133 443.6 129.0 5.7e-53 179.5 23.0 5.2 2 2 2 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21228029|ref|NP_633951.1| - 8.2e-53 178.3 135.9 4.3e-20 72.0 21.7 6.3 3 2 3 6 6 6 6 Right handed beta helix region Acetyltransf_4 PF13420.1 gi|21228030|ref|NP_633952.1| - 7e-21 74.7 0.0 8.1e-21 74.5 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228030|ref|NP_633952.1| - 5.1e-12 45.6 0.0 8.7e-12 44.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|21228030|ref|NP_633952.1| - 3.6e-11 43.4 0.0 4.7e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|21228030|ref|NP_633952.1| - 3.2e-10 40.0 0.0 6.2e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21228030|ref|NP_633952.1| - 8.9e-07 29.0 0.0 1.1e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21228030|ref|NP_633952.1| - 0.00029 20.7 0.0 0.0004 20.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21228030|ref|NP_633952.1| - 0.00055 19.8 0.0 0.001 18.9 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21228030|ref|NP_633952.1| - 0.006 16.3 0.0 0.0091 15.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein MOZ_SAS PF01853.13 gi|21228030|ref|NP_633952.1| - 0.076 12.2 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family TaqI_C PF12950.2 gi|21228031|ref|NP_633953.1| - 0.00038 20.1 0.0 0.00085 19.0 0.0 1.6 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain Transposase_20 PF02371.11 gi|21228032|ref|NP_633954.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21228032|ref|NP_633954.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21228032|ref|NP_633954.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein HATPase_c PF02518.21 gi|21228033|ref|NP_633955.1| - 2.8e-15 55.9 0.1 6.5e-15 54.8 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|21228033|ref|NP_633955.1| - 2.5e-10 40.1 0.0 1.3e-09 37.8 0.0 2.2 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.1 gi|21228033|ref|NP_633955.1| - 1.3e-08 35.1 0.2 1.5e-07 31.6 0.0 2.8 3 2 0 3 3 3 1 PAS domain PAS_4 PF08448.5 gi|21228033|ref|NP_633955.1| - 9.2e-06 25.6 0.0 0.00016 21.6 0.0 2.4 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|21228033|ref|NP_633955.1| - 1.1e-05 25.0 0.0 3.3e-05 23.5 0.0 1.8 1 0 0 1 1 1 1 PAS domain SPOB_a PF14689.1 gi|21228033|ref|NP_633955.1| - 0.0012 18.3 0.3 0.0039 16.7 0.2 1.9 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_2 PF13581.1 gi|21228033|ref|NP_633955.1| - 0.0034 17.1 0.0 0.0076 16.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|21228033|ref|NP_633955.1| - 0.024 14.2 0.0 0.049 13.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase URO-D PF01208.12 gi|21228034|ref|NP_633956.1| - 4.2e-81 272.5 0.0 4.7e-81 272.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) SLBB PF10531.4 gi|21228034|ref|NP_633956.1| - 0.1 12.5 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 SLBB domain EamA PF00892.15 gi|21228035|ref|NP_633957.1| - 1.9e-25 89.3 30.3 1.6e-15 57.2 6.2 2.4 2 1 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21228035|ref|NP_633957.1| - 1.7e-10 41.0 6.0 1.7e-10 41.0 4.1 2.8 2 1 1 3 3 3 1 Multidrug resistance efflux transporter DUF914 PF06027.7 gi|21228035|ref|NP_633957.1| - 0.012 14.5 10.0 0.017 14.0 2.5 2.6 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF914) TPT PF03151.11 gi|21228035|ref|NP_633957.1| - 0.19 11.3 10.3 0.017 14.7 1.7 2.6 2 1 0 2 2 2 0 Triose-phosphate Transporter family DUF3366 PF11846.3 gi|21228035|ref|NP_633957.1| - 0.56 10.0 7.2 0.85 9.4 1.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3366) Cupin_2 PF07883.6 gi|21228036|ref|NP_633958.1| - 9.8e-10 37.7 0.1 1.7e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.14 gi|21228036|ref|NP_633958.1| - 3.8e-05 23.3 0.3 0.0052 16.4 0.0 2.8 3 0 0 3 3 3 1 AraC-like ligand binding domain ARD PF03079.9 gi|21228036|ref|NP_633958.1| - 9e-05 22.4 0.3 0.00021 21.2 0.0 1.7 2 0 0 2 2 2 1 ARD/ARD' family Cupin_3 PF05899.7 gi|21228036|ref|NP_633958.1| - 0.00015 21.0 0.1 0.00027 20.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.17 gi|21228036|ref|NP_633958.1| - 0.00022 20.7 0.0 0.00031 20.1 0.0 1.3 1 0 0 1 1 1 1 Cupin Cupin_6 PF12852.2 gi|21228036|ref|NP_633958.1| - 0.0047 16.5 0.0 0.0067 16.0 0.0 1.3 1 0 0 1 1 1 1 Cupin FliG_M PF14841.1 gi|21228036|ref|NP_633958.1| - 0.0053 16.7 0.2 1.2 9.1 0.0 2.3 2 0 0 2 2 2 1 FliG middle domain HgmA PF04209.8 gi|21228036|ref|NP_633958.1| - 0.0082 14.5 0.0 0.011 14.1 0.0 1.1 1 0 0 1 1 1 1 homogentisate 1,2-dioxygenase EutQ PF06249.7 gi|21228036|ref|NP_633958.1| - 0.044 13.3 0.0 0.32 10.5 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ CENP-C_C PF11699.3 gi|21228036|ref|NP_633958.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Mif2/CENP-C like AraC_binding_2 PF14525.1 gi|21228036|ref|NP_633958.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.6 1 1 0 1 1 1 0 AraC-binding-like domain Acetyltransf_7 PF13508.1 gi|21228037|ref|NP_633959.1| - 4e-08 33.2 0.0 4.8e-06 26.6 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228037|ref|NP_633959.1| - 1.2e-07 31.6 0.1 4.3e-07 29.8 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|21228037|ref|NP_633959.1| - 9e-07 29.0 0.0 0.0038 17.3 0.0 2.2 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21228037|ref|NP_633959.1| - 0.098 12.5 0.0 0.4 10.5 0.0 2.0 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase PD40 PF07676.7 gi|21228038|ref|NP_633960.1| - 2.2e-08 33.5 8.1 1.9 8.2 0.1 6.8 6 2 0 6 6 6 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|21228038|ref|NP_633960.1| - 7.5e-06 24.7 1.4 0.22 10.0 0.0 4.2 1 1 3 4 4 4 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_4 PF13418.1 gi|21228038|ref|NP_633960.1| - 0.00018 21.2 0.1 24 4.8 0.0 5.5 6 0 0 6 6 6 1 Galactose oxidase, central domain DUF3155 PF11352.3 gi|21228038|ref|NP_633960.1| - 0.0076 16.4 0.3 9.2 6.5 0.0 3.6 3 1 1 4 4 4 1 Protein of unknown function (DUF3155) Aha1_N PF09229.6 gi|21228038|ref|NP_633960.1| - 0.15 11.9 3.7 1.9 8.3 0.0 2.8 2 1 0 2 2 2 0 Activator of Hsp90 ATPase, N-terminal DUF581 PF04570.9 gi|21228038|ref|NP_633960.1| - 1.3 8.3 14.0 49 3.3 0.1 5.9 6 0 0 6 6 6 0 Protein of unknown function (DUF581) DUF1949 PF09186.6 gi|21228039|ref|NP_633961.1| - 2.1e-13 49.6 0.0 3.3e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) UPF0029 PF01205.14 gi|21228039|ref|NP_633961.1| - 3.8e-11 42.6 0.3 6.8e-11 41.8 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 HC2 PF07382.6 gi|21228040|ref|NP_633962.1| - 0.052 13.3 0.0 0.066 13.0 0.0 1.1 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 SBP_bac_3 PF00497.15 gi|21228041|ref|NP_633963.1| - 1.3e-67 227.4 0.3 1.6e-67 227.0 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.6 gi|21228041|ref|NP_633963.1| - 0.00012 21.8 0.9 0.086 12.4 0.1 2.6 1 1 2 3 3 3 2 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|21228041|ref|NP_633963.1| - 0.00031 20.2 0.1 0.0011 18.4 0.1 1.8 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF4097 PF13349.1 gi|21228041|ref|NP_633963.1| - 0.015 14.8 0.0 0.042 13.3 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4097) BPD_transp_1 PF00528.17 gi|21228042|ref|NP_633964.1| - 2.3e-22 79.4 5.5 2.3e-22 79.4 3.8 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|21228043|ref|NP_633965.1| - 8.6e-37 126.4 0.0 1.1e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228043|ref|NP_633965.1| - 4.4e-17 62.9 0.0 1.9e-10 41.2 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228043|ref|NP_633965.1| - 1.4e-09 37.4 0.1 3.4e-07 29.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|21228043|ref|NP_633965.1| - 1.3e-07 31.3 0.1 0.0087 15.5 0.0 2.1 1 1 0 2 2 2 2 AAA-like domain AAA_16 PF13191.1 gi|21228043|ref|NP_633965.1| - 5.2e-05 23.3 0.0 0.00011 22.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|21228043|ref|NP_633965.1| - 6.3e-05 23.1 0.0 0.00056 20.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|21228043|ref|NP_633965.1| - 7.3e-05 21.9 0.0 0.019 14.0 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|21228043|ref|NP_633965.1| - 0.00026 20.4 0.0 0.00052 19.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|21228043|ref|NP_633965.1| - 0.00044 19.7 0.0 0.064 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|21228043|ref|NP_633965.1| - 0.00047 20.9 0.6 0.0013 19.4 0.5 2.0 2 1 0 2 2 1 1 AAA domain AAA_13 PF13166.1 gi|21228043|ref|NP_633965.1| - 0.0005 18.6 0.0 0.014 13.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.4 gi|21228043|ref|NP_633965.1| - 0.00062 18.4 0.1 0.17 10.4 0.0 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class DUF258 PF03193.11 gi|21228043|ref|NP_633965.1| - 0.0012 18.0 0.1 0.0017 17.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|21228043|ref|NP_633965.1| - 0.002 18.4 0.0 0.0051 17.1 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|21228043|ref|NP_633965.1| - 0.0029 17.9 0.1 0.0045 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|21228043|ref|NP_633965.1| - 0.003 17.4 0.1 0.033 14.1 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|21228043|ref|NP_633965.1| - 0.003 17.4 0.0 0.006 16.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21228043|ref|NP_633965.1| - 0.009 15.7 0.0 0.078 12.6 0.0 2.1 1 1 0 1 1 1 1 Archaeal ATPase T2SE PF00437.15 gi|21228043|ref|NP_633965.1| - 0.012 14.5 0.0 0.018 13.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.7 gi|21228043|ref|NP_633965.1| - 0.022 14.4 0.0 0.042 13.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain MobB PF03205.9 gi|21228043|ref|NP_633965.1| - 0.032 13.9 0.0 0.06 13.0 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.24 gi|21228043|ref|NP_633965.1| - 0.037 14.2 0.2 0.85 9.8 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IIGP PF05049.8 gi|21228043|ref|NP_633965.1| - 0.048 12.4 0.1 0.066 12.0 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) XdhC_CoxI PF02625.11 gi|21228043|ref|NP_633965.1| - 0.06 12.9 0.0 15 5.3 0.0 2.6 3 0 0 3 3 2 0 XdhC and CoxI family FtsK_SpoIIIE PF01580.13 gi|21228043|ref|NP_633965.1| - 0.063 12.7 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family UPF0079 PF02367.12 gi|21228043|ref|NP_633965.1| - 0.065 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 DEAD PF00270.24 gi|21228043|ref|NP_633965.1| - 0.066 12.6 0.0 0.093 12.2 0.0 1.2 1 0 0 1 1 1 0 DEAD/DEAH box helicase G-alpha PF00503.15 gi|21228043|ref|NP_633965.1| - 0.087 11.4 0.0 0.12 11.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit Rad17 PF03215.10 gi|21228043|ref|NP_633965.1| - 0.089 11.4 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein ATP_bind_1 PF03029.12 gi|21228043|ref|NP_633965.1| - 0.12 11.8 0.1 0.42 10.1 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein UbiA PF01040.13 gi|21228044|ref|NP_633966.1| - 2.4e-31 108.8 17.1 3e-31 108.5 11.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Radical_SAM PF04055.16 gi|21228046|ref|NP_633968.1| - 9.8e-11 42.1 0.0 1.4e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.6 gi|21228046|ref|NP_633968.1| - 0.0032 17.0 0.5 0.016 14.7 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1848) Fer4_14 PF13394.1 gi|21228046|ref|NP_633968.1| - 0.078 13.0 0.9 0.18 11.8 0.6 1.6 1 1 0 1 1 1 0 4Fe-4S single cluster domain CMD PF02627.15 gi|21228047|ref|NP_633969.1| - 0.00032 20.4 0.0 0.00041 20.1 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Glycos_transf_1 PF00534.15 gi|21228048|ref|NP_633970.1| - 5.8e-40 136.5 0.1 9.9e-40 135.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21228048|ref|NP_633970.1| - 1.1e-19 71.1 0.0 1.7e-19 70.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.1 gi|21228048|ref|NP_633970.1| - 4.6e-16 59.1 0.0 1.5e-15 57.5 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21228048|ref|NP_633970.1| - 2.9e-13 49.9 0.0 5.3e-12 45.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.1 gi|21228048|ref|NP_633970.1| - 7.5e-11 42.0 0.0 2.5e-10 40.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.1 gi|21228048|ref|NP_633970.1| - 2.6e-08 34.0 0.0 5e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PIGA PF08288.7 gi|21228048|ref|NP_633970.1| - 1.2e-06 28.7 0.0 2.5e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_5 PF08323.6 gi|21228048|ref|NP_633970.1| - 0.0051 16.3 0.1 0.034 13.6 0.0 2.5 2 1 1 3 3 3 1 Starch synthase catalytic domain UPF0104 PF03706.8 gi|21228049|ref|NP_633971.1| - 6.6e-32 110.9 30.7 1e-31 110.3 21.3 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Aldo_ket_red PF00248.16 gi|21228050|ref|NP_633972.1| - 2.4e-42 144.7 0.0 3.2e-42 144.2 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|21228050|ref|NP_633972.1| - 2.7e-12 46.8 9.7 5.6e-12 45.8 6.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228050|ref|NP_633972.1| - 2.8e-11 43.5 10.0 4.8e-11 42.7 6.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21228050|ref|NP_633972.1| - 5.5e-10 39.1 8.2 1e-09 38.2 5.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21228050|ref|NP_633972.1| - 3.3e-08 33.8 1.4 0.0011 19.3 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228050|ref|NP_633972.1| - 1.6e-07 30.9 8.3 2.7e-07 30.2 5.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21228050|ref|NP_633972.1| - 1.7e-05 25.0 8.4 3.4e-05 24.1 5.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21228050|ref|NP_633972.1| - 0.0012 18.3 11.6 0.0027 17.2 2.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21228050|ref|NP_633972.1| - 0.0028 17.4 6.1 0.33 10.8 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228050|ref|NP_633972.1| - 0.032 14.1 13.0 0.096 12.6 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|21228050|ref|NP_633972.1| - 0.033 13.7 8.6 0.25 10.9 1.5 2.2 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.2 gi|21228050|ref|NP_633972.1| - 0.039 14.2 16.6 0.059 13.7 3.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21228050|ref|NP_633972.1| - 0.04 14.4 3.7 0.04 14.4 2.6 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Filament_head PF04732.9 gi|21228050|ref|NP_633972.1| - 0.12 13.0 0.0 0.23 12.1 0.0 1.4 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region Fer4_6 PF12837.2 gi|21228050|ref|NP_633972.1| - 0.27 11.1 12.4 0.071 13.0 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21228050|ref|NP_633972.1| - 1.2 9.7 4.6 4.6 7.8 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|21228050|ref|NP_633972.1| - 2.8 8.7 15.1 3.4 8.4 3.7 2.3 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Methyltransf_31 PF13847.1 gi|21228051|ref|NP_633973.1| - 3.5e-31 107.8 0.0 6.2e-31 107.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21228051|ref|NP_633973.1| - 2.5e-27 95.2 0.0 9.9e-27 93.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228051|ref|NP_633973.1| - 6.3e-21 74.7 0.0 1.1e-20 73.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228051|ref|NP_633973.1| - 2.6e-20 72.5 0.0 3.3e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|21228051|ref|NP_633973.1| - 2.6e-20 73.0 0.0 1.5e-19 70.5 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228051|ref|NP_633973.1| - 3.1e-19 69.2 0.0 4e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228051|ref|NP_633973.1| - 7.8e-17 61.5 0.0 3.2e-16 59.5 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|21228051|ref|NP_633973.1| - 3.3e-14 52.6 0.0 6.4e-14 51.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|21228051|ref|NP_633973.1| - 4.9e-12 45.3 0.1 3.9e-11 42.3 0.0 2.0 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_26 PF13659.1 gi|21228051|ref|NP_633973.1| - 1.2e-10 41.4 0.0 2.6e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21228051|ref|NP_633973.1| - 6.6e-08 32.3 0.0 1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.6 gi|21228051|ref|NP_633973.1| - 2.6e-07 30.2 0.0 3.6e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|21228051|ref|NP_633973.1| - 3.5e-07 29.5 0.0 4.3e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|21228051|ref|NP_633973.1| - 1.6e-06 27.4 0.0 4.7e-05 22.6 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.9 gi|21228051|ref|NP_633973.1| - 8.6e-06 25.0 0.0 4.7e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 Tellurite resistance protein TehB TPMT PF05724.6 gi|21228051|ref|NP_633973.1| - 1.4e-05 24.6 0.0 2.3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_9 PF08003.6 gi|21228051|ref|NP_633973.1| - 2.7e-05 23.0 0.0 4.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Met_10 PF02475.11 gi|21228051|ref|NP_633973.1| - 0.00017 21.2 0.0 0.00024 20.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_24 PF13578.1 gi|21228051|ref|NP_633973.1| - 0.00038 21.2 0.0 0.00093 19.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21228051|ref|NP_633973.1| - 0.00073 18.6 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase GCD14 PF08704.5 gi|21228051|ref|NP_633973.1| - 0.0011 18.5 0.0 0.0017 17.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit tRNA_U5-meth_tr PF05958.6 gi|21228051|ref|NP_633973.1| - 0.0012 17.6 0.0 0.002 16.9 0.0 1.3 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase CheR PF01739.13 gi|21228051|ref|NP_633973.1| - 0.0016 17.7 0.0 0.58 9.3 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain MetW PF07021.7 gi|21228051|ref|NP_633973.1| - 0.0068 15.7 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW ADH_zinc_N PF00107.21 gi|21228051|ref|NP_633973.1| - 0.0085 15.6 0.0 0.03 13.8 0.0 1.9 1 1 0 1 1 1 1 Zinc-binding dehydrogenase UPF0020 PF01170.13 gi|21228051|ref|NP_633973.1| - 0.0095 15.5 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_PK PF05891.7 gi|21228051|ref|NP_633973.1| - 0.011 15.0 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_15 PF09445.5 gi|21228051|ref|NP_633973.1| - 0.015 14.8 0.0 0.022 14.3 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NAS PF03059.11 gi|21228051|ref|NP_633973.1| - 0.02 14.0 0.0 0.028 13.5 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein Methyltransf_8 PF05148.10 gi|21228051|ref|NP_633973.1| - 0.024 14.2 0.0 0.046 13.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_32 PF13679.1 gi|21228051|ref|NP_633973.1| - 0.024 14.2 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.14 gi|21228051|ref|NP_633973.1| - 0.027 14.4 0.0 0.1 12.5 0.0 2.1 1 1 0 1 1 1 0 FtsJ-like methyltransferase N2227 PF07942.7 gi|21228051|ref|NP_633973.1| - 0.065 12.1 0.0 5.4 5.8 0.0 2.1 1 1 1 2 2 2 0 N2227-like protein DUF3791 PF12668.2 gi|21228051|ref|NP_633973.1| - 0.068 12.7 0.0 0.27 10.8 0.0 2.0 2 0 0 2 2 1 0 Protein of unknown function (DUF3791) DUF938 PF06080.7 gi|21228051|ref|NP_633973.1| - 0.073 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_3 PF01596.12 gi|21228051|ref|NP_633973.1| - 0.093 11.7 0.0 0.23 10.4 0.0 1.6 1 1 1 2 2 2 0 O-methyltransferase Methyltransf_16 PF10294.4 gi|21228051|ref|NP_633973.1| - 0.12 11.8 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Catalase PF00199.14 gi|21228052|ref|NP_633974.1| - 4.6e-170 565.4 0.2 6e-170 565.0 0.1 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.7 gi|21228052|ref|NP_633974.1| - 3e-23 81.4 0.1 6.6e-23 80.3 0.0 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive DJ-1_PfpI PF01965.19 gi|21228052|ref|NP_633974.1| - 8e-15 54.5 0.0 7.5e-14 51.4 0.0 2.2 1 1 0 1 1 1 1 DJ-1/PfpI family Cation_efflux PF01545.16 gi|21228054|ref|NP_633976.1| - 1.9e-16 59.9 3.5 2.8e-16 59.4 2.4 1.3 1 0 0 1 1 1 1 Cation efflux family UPF0233 PF06781.7 gi|21228054|ref|NP_633976.1| - 0.059 12.9 0.1 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0233) Cation_ATPase_C PF00689.16 gi|21228054|ref|NP_633976.1| - 0.38 10.2 3.7 0.58 9.6 2.1 1.7 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus Cation_efflux PF01545.16 gi|21228055|ref|NP_633977.1| - 3.4e-37 128.0 0.2 4.2e-37 127.7 0.2 1.0 1 0 0 1 1 1 1 Cation efflux family NifU_N PF01592.11 gi|21228056|ref|NP_633978.1| - 1.8e-42 144.2 0.0 2.8e-42 143.6 0.0 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain DUF59 PF01883.14 gi|21228056|ref|NP_633978.1| - 1.2e-09 38.0 2.6 1.6e-09 37.5 0.9 1.9 2 0 0 2 2 2 1 Domain of unknown function DUF59 Aminotran_5 PF00266.14 gi|21228057|ref|NP_633979.1| - 1.8e-71 240.8 0.0 2.3e-71 240.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|21228057|ref|NP_633979.1| - 2.7e-06 26.6 0.0 4.7e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|21228057|ref|NP_633979.1| - 1.7e-05 24.1 0.0 2e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|21228057|ref|NP_633979.1| - 0.0004 18.7 0.1 0.00072 17.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|21228057|ref|NP_633979.1| - 0.0026 16.7 0.0 0.0037 16.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II SLA_LP_auto_ag PF05889.8 gi|21228057|ref|NP_633979.1| - 0.034 12.6 0.0 0.054 11.9 0.0 1.3 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Pyridoxal_deC PF00282.14 gi|21228057|ref|NP_633979.1| - 0.1 10.9 0.0 0.27 9.6 0.0 1.6 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain DrsE_2 PF13686.1 gi|21228058|ref|NP_633980.1| - 9.3e-35 119.5 3.5 2.5e-34 118.2 2.4 1.5 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.10 gi|21228058|ref|NP_633980.1| - 2.9e-06 27.3 0.0 4.8e-06 26.6 0.0 1.3 1 1 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.12 gi|21228059|ref|NP_633981.1| - 3.7e-20 71.2 0.2 4e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|21228059|ref|NP_633981.1| - 0.042 13.4 0.0 1.9 8.1 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) HIT PF01230.18 gi|21228060|ref|NP_633982.1| - 5.9e-32 110.1 0.0 7.3e-31 106.5 0.0 1.9 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.3 gi|21228060|ref|NP_633982.1| - 2.7e-19 69.5 0.0 4.3e-19 68.8 0.0 1.3 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|21228060|ref|NP_633982.1| - 0.0054 16.3 0.0 0.0092 15.6 0.0 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 PQ-loop PF04193.9 gi|21228061|ref|NP_633983.1| - 1.3e-09 37.4 0.5 1.3e-09 37.4 0.3 1.5 2 0 0 2 2 2 1 PQ loop repeat MtN3_slv PF03083.11 gi|21228061|ref|NP_633983.1| - 4.8e-08 32.7 0.8 5.8e-08 32.4 0.5 1.3 1 1 0 1 1 1 1 Sugar efflux transporter for intercellular exchange LAB_N PF07578.6 gi|21228061|ref|NP_633983.1| - 0.00051 19.9 0.2 0.00068 19.5 0.2 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain DUF2593 PF10767.4 gi|21228061|ref|NP_633983.1| - 0.094 12.4 0.4 0.19 11.3 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2593) DUF2929 PF11151.3 gi|21228061|ref|NP_633983.1| - 0.11 12.5 0.5 0.36 10.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2929) DUF3054 PF11255.3 gi|21228062|ref|NP_633984.1| - 0.083 12.7 2.9 0.098 12.5 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) DUF4013 PF13197.1 gi|21228062|ref|NP_633984.1| - 8.7 5.6 21.6 2.8e+02 0.7 14.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4013) DUF3311 PF11755.3 gi|21228062|ref|NP_633984.1| - 9.2 5.8 13.8 4.7 6.8 0.6 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3311) CARDB PF07705.6 gi|21228063|ref|NP_633985.1| - 1e-102 336.8 18.3 1.7e-27 95.3 3.6 4.5 4 0 0 4 4 4 4 CARDB DUF11 PF01345.13 gi|21228063|ref|NP_633985.1| - 9.2e-13 48.0 8.0 0.0045 17.0 0.0 4.9 5 0 0 5 5 5 4 Domain of unknown function DUF11 Serglycin PF04360.7 gi|21228063|ref|NP_633985.1| - 0.079 12.6 1.0 0.18 11.5 0.7 1.6 1 0 0 1 1 1 0 Serglycin DUF4101 PF13355.1 gi|21228063|ref|NP_633985.1| - 0.25 11.7 4.7 32 4.9 0.2 4.2 4 0 0 4 4 4 0 Protein of unknown function (DUF4101) tRNA-synt_1b PF00579.20 gi|21228065|ref|NP_633987.1| - 1.1e-56 192.0 0.0 1.4e-56 191.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|21228065|ref|NP_633987.1| - 0.067 11.8 0.0 2.4 6.7 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) Msg2_C PF12373.3 gi|21228065|ref|NP_633987.1| - 0.34 10.1 1.8 0.73 9.1 1.3 1.6 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Thg1C PF14413.1 gi|21228066|ref|NP_633988.1| - 1.6e-27 95.5 0.5 2.2e-27 95.1 0.3 1.1 1 0 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.7 gi|21228066|ref|NP_633988.1| - 5.6e-27 94.0 0.0 7.6e-27 93.5 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase PRC PF05239.11 gi|21228067|ref|NP_633989.1| - 9.7e-15 54.2 1.2 1.2e-14 53.8 0.8 1.1 1 0 0 1 1 1 1 PRC-barrel domain DUF650 PF04894.7 gi|21228067|ref|NP_633989.1| - 0.062 12.7 0.1 0.069 12.6 0.1 1.2 1 0 0 1 1 1 0 Archaeal protein of unknown function (DUF650) Ldh_1_N PF00056.18 gi|21228068|ref|NP_633990.1| - 8.1e-38 129.4 1.6 1.3e-37 128.7 1.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|21228068|ref|NP_633990.1| - 1.4e-33 116.0 0.0 2.1e-33 115.5 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.11 gi|21228068|ref|NP_633990.1| - 7.5e-05 22.1 1.4 0.00028 20.2 0.1 2.1 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.9 gi|21228068|ref|NP_633990.1| - 0.00043 19.7 0.7 0.0042 16.4 0.5 2.2 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ThiF PF00899.16 gi|21228068|ref|NP_633990.1| - 0.0074 16.1 0.1 0.02 14.7 0.1 1.7 1 0 0 1 1 1 1 ThiF family F420_oxidored PF03807.12 gi|21228068|ref|NP_633990.1| - 0.056 13.8 2.8 0.14 12.5 0.2 2.7 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.19 gi|21228068|ref|NP_633990.1| - 0.081 13.2 0.1 0.26 11.5 0.0 1.8 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain RNase_H_2 PF13482.1 gi|21228069|ref|NP_633991.1| - 6.4e-35 120.3 0.0 1e-34 119.7 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.4 gi|21228069|ref|NP_633991.1| - 2.5e-05 23.9 0.0 0.15 11.5 0.0 2.2 2 0 0 2 2 2 2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB HHH_5 PF14520.1 gi|21228069|ref|NP_633991.1| - 0.0022 18.1 0.0 0.006 16.7 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain GPI PF06560.6 gi|21228070|ref|NP_633992.1| - 1.2e-76 255.8 0.0 1.5e-76 255.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.6 gi|21228070|ref|NP_633992.1| - 0.00054 19.4 0.4 0.0027 17.1 0.2 2.4 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.17 gi|21228070|ref|NP_633992.1| - 0.0019 17.6 0.0 0.0029 17.0 0.0 1.2 1 0 0 1 1 1 1 Cupin ARD PF03079.9 gi|21228070|ref|NP_633992.1| - 0.06 13.2 0.2 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 ARD/ARD' family JmjC PF02373.17 gi|21228070|ref|NP_633992.1| - 0.13 12.5 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Ribosomal_L9_N PF01281.14 gi|21228070|ref|NP_633992.1| - 0.38 10.0 2.5 3 7.1 0.0 2.6 3 0 0 3 3 3 0 Ribosomal protein L9, N-terminal domain DUF128 PF01995.11 gi|21228071|ref|NP_633993.1| - 1.2e-94 315.7 0.9 1.3e-94 315.5 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF128 DHHA1 PF02272.14 gi|21228072|ref|NP_633994.1| - 9e-16 57.3 1.3 1.8e-15 56.3 0.9 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|21228072|ref|NP_633994.1| - 1.4e-14 53.9 0.2 2.2e-14 53.3 0.1 1.3 1 0 0 1 1 1 1 DHH family SelA PF03841.8 gi|21228072|ref|NP_633994.1| - 0.0028 16.4 0.0 0.0055 15.4 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DUF1699 PF08004.6 gi|21228075|ref|NP_633997.1| - 1.7e-63 212.0 1.6 1.8e-63 211.8 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Metalloenzyme PF01676.13 gi|21228075|ref|NP_633997.1| - 0.095 12.0 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Metalloenzyme superfamily cwf21 PF08312.7 gi|21228075|ref|NP_633997.1| - 0.55 10.1 4.8 0.15 11.9 1.2 1.6 2 0 0 2 2 2 0 cwf21 domain Radical_SAM PF04055.16 gi|21228076|ref|NP_633998.1| - 1.1e-15 58.2 0.0 2.8e-15 56.8 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|21228076|ref|NP_633998.1| - 3e-10 39.9 0.7 1.5e-09 37.7 0.1 2.5 3 0 0 3 3 3 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|21228076|ref|NP_633998.1| - 0.0004 20.4 0.0 0.0013 18.8 0.0 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|21228076|ref|NP_633998.1| - 0.0032 17.6 0.0 0.009 16.1 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain zinc_ribbon_5 PF13719.1 gi|21228076|ref|NP_633998.1| - 0.014 14.9 1.3 0.031 13.8 0.9 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21228076|ref|NP_633998.1| - 0.021 14.4 1.3 0.048 13.3 0.9 1.5 1 0 0 1 1 1 0 zinc-ribbon domain S-layer PF07752.6 gi|21228078|ref|NP_634000.1| - 2.8e-193 639.6 35.6 9.9e-97 323.1 9.8 2.1 2 0 0 2 2 2 2 S-layer protein PT PF04886.7 gi|21228078|ref|NP_634000.1| - 1.8e-05 23.9 16.2 3.1e-05 23.2 11.2 1.3 1 0 0 1 1 1 1 PT repeat DUF3224 PF11528.3 gi|21228078|ref|NP_634000.1| - 0.00035 20.1 0.0 0.83 9.1 0.0 2.7 2 0 0 2 2 2 2 Protein of unknown function (DUF3224) Mtf2_C PF14061.1 gi|21228078|ref|NP_634000.1| - 0.0006 19.6 0.0 1.9 8.4 0.0 2.9 2 0 0 2 2 2 2 Polycomb-like MTF2 factor 2 tRNA-synt_1c_C PF03950.13 gi|21228078|ref|NP_634000.1| - 0.062 12.9 9.5 4.9 6.7 0.1 3.7 4 0 0 4 4 4 0 tRNA synthetases class I (E and Q), anti-codon binding domain DUF2874 PF11396.3 gi|21228078|ref|NP_634000.1| - 0.48 10.4 13.4 1.4 8.8 0.4 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF2874) TrbI_Ftype PF09677.5 gi|21228078|ref|NP_634000.1| - 1.1 9.1 4.5 72 3.2 0.0 3.1 3 0 0 3 3 3 0 Type-F conjugative transfer system protein (TrbI_Ftype) GXGXG PF01493.14 gi|21228080|ref|NP_634002.1| - 8.7e-34 116.2 17.1 2.8e-33 114.6 11.9 1.7 1 1 0 1 1 1 1 GXGXG motif Nse4-Nse3_bdg PF15412.1 gi|21228080|ref|NP_634002.1| - 0.1 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE Dicty_CAD PF05720.7 gi|21228080|ref|NP_634002.1| - 0.15 11.6 1.7 11 5.7 0.0 3.3 3 0 0 3 3 3 0 Cell-cell adhesion domain DIM PF08194.7 gi|21228080|ref|NP_634002.1| - 6.1 6.8 19.7 2.8 7.9 0.1 6.0 5 1 1 6 6 6 0 DIM protein Amidohydro_3 PF07969.6 gi|21228081|ref|NP_634003.1| - 4.9e-69 233.4 0.0 5.8e-69 233.2 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|21228081|ref|NP_634003.1| - 1.9e-08 33.9 0.2 4.4e-07 29.6 0.0 3.1 4 0 0 4 4 4 1 Amidohydrolase Molybdopterin PF00384.17 gi|21228082|ref|NP_634004.1| - 1e-20 73.9 0.1 6e-20 71.3 0.1 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.11 gi|21228082|ref|NP_634004.1| - 0.024 14.4 0.2 0.075 12.8 0.1 1.8 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Viral_cys_rich PF08008.7 gi|21228082|ref|NP_634004.1| - 0.14 11.7 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Viral cysteine rich Molydop_binding PF01568.16 gi|21228083|ref|NP_634005.1| - 3.5e-15 55.7 0.0 4.4e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF2946 PF11162.3 gi|21228083|ref|NP_634005.1| - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Alkyl_sulf_dimr PF14863.1 gi|21228084|ref|NP_634006.1| - 1.3e-35 122.6 0.2 2.5e-35 121.7 0.1 1.5 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.1 gi|21228084|ref|NP_634006.1| - 1.1e-14 54.5 0.2 2e-14 53.6 0.1 1.5 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Lactamase_B PF00753.22 gi|21228084|ref|NP_634006.1| - 1.6e-11 44.2 0.3 3.8e-11 42.9 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SCP2 PF02036.12 gi|21228084|ref|NP_634006.1| - 5.4e-10 39.4 0.0 1.3e-09 38.2 0.0 1.7 1 0 0 1 1 1 1 SCP-2 sterol transfer family Lactamase_B_2 PF12706.2 gi|21228084|ref|NP_634006.1| - 0.029 13.9 0.3 0.057 12.9 0.2 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|21228084|ref|NP_634006.1| - 0.064 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain PKD PF00801.15 gi|21228085|ref|NP_634007.1| - 3.5e-86 282.9 103.9 1.9e-12 46.7 3.0 12.1 12 0 0 12 12 12 10 PKD domain Big_1 PF02369.11 gi|21228085|ref|NP_634007.1| - 3.9e-11 42.7 2.2 3.9e-11 42.7 1.5 9.3 10 1 1 11 11 11 2 Bacterial Ig-like domain (group 1) Hemerythrin PF01814.18 gi|21228086|ref|NP_634008.1| - 1.1e-15 57.9 6.2 1.5e-15 57.5 4.3 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain Mst1_SARAH PF11629.3 gi|21228086|ref|NP_634008.1| - 0.032 14.0 2.6 1.3 8.9 0.0 2.9 3 1 0 3 3 3 0 C terminal SARAH domain of Mst1 TROVE PF05731.6 gi|21228086|ref|NP_634008.1| - 0.15 10.7 5.4 0.17 10.6 3.8 1.1 1 0 0 1 1 1 0 TROVE domain BCDHK_Adom3 PF10436.4 gi|21228086|ref|NP_634008.1| - 0.16 11.4 1.5 0.2 11.1 1.0 1.2 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase Seryl_tRNA_N PF02403.17 gi|21228086|ref|NP_634008.1| - 0.18 11.8 11.1 0.34 10.9 6.7 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Mitofilin PF09731.4 gi|21228086|ref|NP_634008.1| - 0.32 9.5 15.1 0.37 9.3 10.5 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ING PF12998.2 gi|21228086|ref|NP_634008.1| - 0.43 10.8 5.2 0.35 11.1 2.1 1.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding IncA PF04156.9 gi|21228086|ref|NP_634008.1| - 0.62 9.6 10.2 0.98 8.9 7.1 1.4 1 1 0 1 1 1 0 IncA protein HSP70 PF00012.15 gi|21228086|ref|NP_634008.1| - 0.84 7.4 8.0 0.82 7.5 5.5 1.1 1 0 0 1 1 1 0 Hsp70 protein Hormone_1 PF00103.15 gi|21228086|ref|NP_634008.1| - 0.93 8.7 5.0 1.4 8.2 3.3 1.4 1 1 0 1 1 1 0 Somatotropin hormone family Hemerythrin PF01814.18 gi|21228087|ref|NP_634009.1| - 3.4e-15 56.3 7.4 5.2e-15 55.7 5.2 1.3 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain SurA_N_2 PF13623.1 gi|21228087|ref|NP_634009.1| - 0.078 12.9 0.2 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 SurA N-terminal domain Phasin_2 PF09361.5 gi|21228087|ref|NP_634009.1| - 0.12 12.3 1.2 12 5.9 0.1 2.4 2 0 0 2 2 2 0 Phasin protein Med9 PF07544.8 gi|21228087|ref|NP_634009.1| - 0.33 10.6 2.2 0.4 10.4 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 PPV_E1_N PF00524.13 gi|21228087|ref|NP_634009.1| - 1 9.5 4.9 3.7 7.7 1.0 2.2 1 1 1 2 2 2 0 E1 Protein, N terminal domain PRA-PH PF01503.12 gi|21228087|ref|NP_634009.1| - 1.2 9.4 5.4 0.25 11.6 0.4 2.1 2 1 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase PhoU PF01895.14 gi|21228088|ref|NP_634010.1| - 5.9e-25 87.5 7.8 2e-19 69.8 1.2 2.6 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|21228088|ref|NP_634010.1| - 0.00014 21.4 0.0 0.00034 20.2 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE Membr_traf_MHD PF10540.4 gi|21228088|ref|NP_634010.1| - 0.034 13.9 0.0 0.69 9.7 0.0 2.3 2 0 0 2 2 2 0 Munc13 (mammalian uncoordinated) homology domain DDE_Tnp_IS1 PF03400.8 gi|21228089|ref|NP_634011.1| - 6e-06 26.3 0.0 8.8e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 IS1 transposase rve_3 PF13683.1 gi|21228089|ref|NP_634011.1| - 0.00022 20.7 0.1 0.00045 19.6 0.0 1.6 1 1 0 1 1 1 1 Integrase core domain DUF2309 PF10070.4 gi|21228089|ref|NP_634011.1| - 0.078 11.0 0.0 0.082 10.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) HTH_38 PF13936.1 gi|21228090|ref|NP_634012.1| - 0.014 14.9 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|21228090|ref|NP_634012.1| - 0.054 13.1 0.0 0.097 12.3 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Consortin_C PF15281.1 gi|21228091|ref|NP_634013.1| - 0.0019 17.7 0.0 0.0022 17.5 0.0 1.1 1 0 0 1 1 1 1 Consortin C-terminus DUF996 PF06195.8 gi|21228091|ref|NP_634013.1| - 0.0049 16.8 4.9 0.0063 16.5 3.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF996) ODV-E18 PF10717.4 gi|21228091|ref|NP_634013.1| - 0.027 13.9 2.5 0.11 12.0 0.0 2.3 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Anoctamin PF04547.7 gi|21228091|ref|NP_634013.1| - 0.029 13.0 0.1 0.03 12.9 0.1 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel Vma12 PF11712.3 gi|21228091|ref|NP_634013.1| - 0.032 13.9 0.1 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF1129 PF06570.6 gi|21228091|ref|NP_634013.1| - 0.036 13.3 1.1 0.049 12.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF912 PF06024.7 gi|21228091|ref|NP_634013.1| - 0.054 13.5 0.1 0.054 13.5 0.1 2.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) DUF4396 PF14342.1 gi|21228091|ref|NP_634013.1| - 0.16 12.0 2.0 0.2 11.7 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4396) DUF3671 PF12420.3 gi|21228091|ref|NP_634013.1| - 0.21 11.6 3.4 0.3 11.0 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF3753 PF12575.3 gi|21228091|ref|NP_634013.1| - 0.26 11.1 0.2 0.26 11.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3753) DUF2207 PF09972.4 gi|21228091|ref|NP_634013.1| - 0.31 9.5 6.2 0.79 8.2 4.3 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF350 PF03994.9 gi|21228091|ref|NP_634013.1| - 0.46 10.2 4.7 2.5 7.8 0.1 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF350) Alph_Pro_TM PF09608.5 gi|21228092|ref|NP_634014.1| - 0.012 15.1 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Putative transmembrane protein (Alph_Pro_TM) CARDB PF07705.6 gi|21228093|ref|NP_634015.1| - 0.0014 18.6 2.7 0.0028 17.6 0.6 2.1 2 0 0 2 2 2 1 CARDB FixG_C PF11614.3 gi|21228093|ref|NP_634015.1| - 0.029 14.4 0.6 0.19 11.8 0.0 2.4 2 2 0 2 2 2 0 IG-like fold at C-terminal of FixG, putative oxidoreductase CtaG_Cox11 PF04442.9 gi|21228093|ref|NP_634015.1| - 0.035 13.9 0.1 0.07 12.9 0.0 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 Lipoprotein_19 PF13617.1 gi|21228093|ref|NP_634015.1| - 0.091 12.4 0.1 0.21 11.2 0.1 1.6 1 0 0 1 1 1 0 YnbE-like lipoprotein LPAM_1 PF08139.7 gi|21228093|ref|NP_634015.1| - 0.094 12.9 3.5 0.2 11.9 2.4 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site CBM49 PF09478.5 gi|21228093|ref|NP_634015.1| - 0.096 12.7 0.7 0.79 9.8 0.2 2.2 2 0 0 2 2 2 0 Carbohydrate binding domain CBM49 DUF2393 PF09624.5 gi|21228093|ref|NP_634015.1| - 1.7 8.1 5.0 0.66 9.4 0.1 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2393) ABC2_membrane PF01061.19 gi|21228095|ref|NP_634017.1| - 7.7e-31 106.9 18.6 1.2e-30 106.2 12.9 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21228095|ref|NP_634017.1| - 7.2e-15 54.8 24.6 9.1e-15 54.5 17.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein FA_desaturase PF00487.19 gi|21228095|ref|NP_634017.1| - 4.5 6.6 9.2 4.1 6.7 1.6 2.2 1 1 1 2 2 2 0 Fatty acid desaturase ABC_tran PF00005.22 gi|21228096|ref|NP_634018.1| - 5.3e-29 101.2 0.0 8.3e-29 100.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228096|ref|NP_634018.1| - 3.8e-12 46.7 0.0 2.6e-08 34.2 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|21228096|ref|NP_634018.1| - 2e-05 25.0 0.0 2e-05 25.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21228096|ref|NP_634018.1| - 3e-05 23.4 0.2 6.6e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|21228096|ref|NP_634018.1| - 0.0017 17.4 0.0 0.067 12.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.14 gi|21228096|ref|NP_634018.1| - 0.025 13.8 0.0 0.26 10.5 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|21228096|ref|NP_634018.1| - 0.029 13.5 0.0 0.045 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 MukB PF04310.7 gi|21228096|ref|NP_634018.1| - 0.041 13.2 0.1 0.069 12.4 0.1 1.4 1 1 0 1 1 1 0 MukB N-terminal KdpD PF02702.12 gi|21228096|ref|NP_634018.1| - 0.056 12.5 0.0 0.074 12.1 0.0 1.3 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain AAA_PrkA PF08298.6 gi|21228096|ref|NP_634018.1| - 0.061 12.0 0.0 0.11 11.2 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain CbiQ PF02361.11 gi|21228097|ref|NP_634019.1| - 2.2e-28 99.3 11.3 2.2e-28 99.3 7.8 1.3 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.22 gi|21228098|ref|NP_634020.1| - 1.6e-54 183.9 0.1 9.7e-27 93.9 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|21228098|ref|NP_634020.1| - 1.7e-15 57.7 4.0 0.00014 21.9 0.0 4.2 2 2 1 3 3 3 3 AAA domain AAA_29 PF13555.1 gi|21228098|ref|NP_634020.1| - 2.6e-11 42.8 0.1 0.0003 20.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.14 gi|21228098|ref|NP_634020.1| - 5.4e-10 38.8 1.6 0.0006 19.1 0.1 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|21228098|ref|NP_634020.1| - 1.5e-09 37.5 0.1 0.0016 17.9 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|21228098|ref|NP_634020.1| - 3.8e-09 36.7 0.1 4.4e-05 23.5 0.0 3.0 2 2 0 2 2 2 2 AAA ATPase domain AAA_10 PF12846.2 gi|21228098|ref|NP_634020.1| - 4.8e-09 36.0 2.2 0.054 12.9 0.0 3.3 3 0 0 3 3 3 3 AAA-like domain T2SE PF00437.15 gi|21228098|ref|NP_634020.1| - 9.1e-08 31.3 0.1 0.00061 18.7 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_17 PF13207.1 gi|21228098|ref|NP_634020.1| - 2.2e-07 31.7 0.3 0.05 14.4 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|21228098|ref|NP_634020.1| - 5.1e-07 30.0 0.5 0.063 13.5 0.1 3.2 3 0 0 3 3 3 2 AAA domain AAA_23 PF13476.1 gi|21228098|ref|NP_634020.1| - 1e-06 29.2 0.1 0.0062 16.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.1 gi|21228098|ref|NP_634020.1| - 1.4e-06 28.1 0.1 0.092 12.6 0.0 3.1 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.1 gi|21228098|ref|NP_634020.1| - 2.1e-06 27.8 1.1 0.022 14.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|21228098|ref|NP_634020.1| - 5.4e-06 25.6 0.1 0.0086 15.2 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|21228098|ref|NP_634020.1| - 5.9e-06 26.4 2.9 0.031 14.3 0.1 3.2 3 1 0 3 3 3 2 AAA domain Arch_ATPase PF01637.13 gi|21228098|ref|NP_634020.1| - 8.7e-06 25.5 0.0 0.018 14.7 0.0 2.4 2 0 0 2 2 2 2 Archaeal ATPase NACHT PF05729.7 gi|21228098|ref|NP_634020.1| - 1.9e-05 24.4 0.2 0.16 11.6 0.0 2.5 2 0 0 2 2 2 2 NACHT domain AAA_14 PF13173.1 gi|21228098|ref|NP_634020.1| - 2e-05 24.5 0.1 0.051 13.4 0.0 2.7 2 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|21228098|ref|NP_634020.1| - 2.3e-05 23.6 0.2 0.0022 17.1 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI ArgK PF03308.11 gi|21228098|ref|NP_634020.1| - 3.6e-05 22.6 0.2 0.025 13.3 0.0 2.4 2 0 0 2 2 2 2 ArgK protein Miro PF08477.8 gi|21228098|ref|NP_634020.1| - 8.5e-05 23.0 0.1 0.053 14.0 0.0 2.5 2 0 0 2 2 2 1 Miro-like protein AAA_5 PF07728.9 gi|21228098|ref|NP_634020.1| - 8.6e-05 22.2 0.5 0.12 12.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) DAP3 PF10236.4 gi|21228098|ref|NP_634020.1| - 0.00014 20.9 0.9 0.25 10.2 0.1 2.3 2 0 0 2 2 2 2 Mitochondrial ribosomal death-associated protein 3 AAA_19 PF13245.1 gi|21228098|ref|NP_634020.1| - 0.00015 21.4 0.1 0.83 9.4 0.0 2.5 2 0 0 2 2 2 2 Part of AAA domain NTPase_1 PF03266.10 gi|21228098|ref|NP_634020.1| - 0.00016 21.4 0.2 0.68 9.6 0.2 2.6 2 0 0 2 2 2 2 NTPase RNA_helicase PF00910.17 gi|21228098|ref|NP_634020.1| - 0.00018 21.6 0.2 0.18 11.9 0.0 2.8 3 0 0 3 3 2 1 RNA helicase AAA_33 PF13671.1 gi|21228098|ref|NP_634020.1| - 0.00028 20.7 0.1 0.75 9.6 0.1 2.5 2 0 0 2 2 2 2 AAA domain MobB PF03205.9 gi|21228098|ref|NP_634020.1| - 0.00029 20.5 0.4 0.3 10.7 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B FtsK_SpoIIIE PF01580.13 gi|21228098|ref|NP_634020.1| - 0.00035 20.0 0.5 0.056 12.9 0.0 2.4 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_30 PF13604.1 gi|21228098|ref|NP_634020.1| - 0.00048 19.7 0.0 0.53 9.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|21228098|ref|NP_634020.1| - 0.00052 19.1 1.2 5 6.0 0.0 3.4 4 0 0 4 4 3 0 AAA ATPase domain MMR_HSR1 PF01926.18 gi|21228098|ref|NP_634020.1| - 0.0007 19.5 0.3 1.7 8.5 0.0 2.8 2 1 0 2 2 2 2 50S ribosome-binding GTPase Rad17 PF03215.10 gi|21228098|ref|NP_634020.1| - 0.0017 17.0 0.1 0.0036 16.0 0.1 1.4 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA PF00004.24 gi|21228098|ref|NP_634020.1| - 0.002 18.3 2.1 0.082 13.1 0.0 3.0 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) MutS_V PF00488.16 gi|21228098|ref|NP_634020.1| - 0.0032 16.9 0.0 0.55 9.5 0.0 2.6 3 0 0 3 3 2 1 MutS domain V Viral_helicase1 PF01443.13 gi|21228098|ref|NP_634020.1| - 0.0047 16.4 0.4 2.7 7.4 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Zeta_toxin PF06414.7 gi|21228098|ref|NP_634020.1| - 0.0049 15.9 0.1 1.3 8.0 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin SRP54 PF00448.17 gi|21228098|ref|NP_634020.1| - 0.0051 16.2 0.7 0.2 11.0 0.1 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain PduV-EutP PF10662.4 gi|21228098|ref|NP_634020.1| - 0.0053 16.2 0.2 0.77 9.2 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation UPF0079 PF02367.12 gi|21228098|ref|NP_634020.1| - 0.007 15.9 1.0 0.18 11.4 0.1 2.4 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 ATP_bind_1 PF03029.12 gi|21228098|ref|NP_634020.1| - 0.0084 15.6 0.3 1.7 8.0 0.0 2.4 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein ATP-synt_ab PF00006.20 gi|21228098|ref|NP_634020.1| - 0.0085 15.6 0.2 2.3 7.6 0.0 2.5 2 1 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain KaiC PF06745.8 gi|21228098|ref|NP_634020.1| - 0.0086 15.2 7.4 1.2 8.1 0.1 3.7 5 0 0 5 5 3 1 KaiC NB-ARC PF00931.17 gi|21228098|ref|NP_634020.1| - 0.0095 14.8 0.4 0.35 9.6 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain PIF1 PF05970.9 gi|21228098|ref|NP_634020.1| - 0.0097 14.8 0.2 0.72 8.7 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase ABC_ATPase PF09818.4 gi|21228098|ref|NP_634020.1| - 0.012 14.2 3.8 3.4 6.1 0.1 3.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class G-alpha PF00503.15 gi|21228098|ref|NP_634020.1| - 0.021 13.5 0.4 1.6 7.3 0.1 2.2 2 0 0 2 2 2 0 G-protein alpha subunit AAA_24 PF13479.1 gi|21228098|ref|NP_634020.1| - 0.021 14.4 0.2 4.9 6.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.8 gi|21228098|ref|NP_634020.1| - 0.024 13.5 0.2 0.59 9.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.4 gi|21228098|ref|NP_634020.1| - 0.029 13.0 0.4 1.1 7.8 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain cobW PF02492.14 gi|21228098|ref|NP_634020.1| - 0.03 13.7 4.2 1.9 7.9 0.1 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain Adeno_IVa2 PF02456.10 gi|21228098|ref|NP_634020.1| - 0.044 12.4 0.0 1.8 7.1 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein Fer4_NifH PF00142.13 gi|21228098|ref|NP_634020.1| - 0.068 12.3 0.0 0.14 11.3 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|21228098|ref|NP_634020.1| - 0.07 12.5 1.8 0.16 11.3 0.0 2.3 3 0 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PRK PF00485.13 gi|21228098|ref|NP_634020.1| - 0.085 12.4 0.1 2.6 7.5 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family IstB_IS21 PF01695.12 gi|21228098|ref|NP_634020.1| - 0.11 11.8 0.6 2.5 7.4 0.1 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.12 gi|21228098|ref|NP_634020.1| - 0.12 12.1 0.8 4.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function DUF87 DUF3584 PF12128.3 gi|21228098|ref|NP_634020.1| - 0.3 8.3 0.2 0.44 7.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Dynamin_N PF00350.18 gi|21228098|ref|NP_634020.1| - 0.4 10.4 2.5 13 5.5 0.1 2.5 2 0 0 2 2 2 0 Dynamin family NPCBM_assoc PF10633.4 gi|21228099|ref|NP_634021.1| - 0.026 14.5 0.0 5.4 7.1 0.0 2.7 2 1 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4625 PF15418.1 gi|21228099|ref|NP_634021.1| - 0.036 14.2 0.0 0.073 13.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) OppC_N PF12911.2 gi|21228099|ref|NP_634021.1| - 5.9 6.3 6.6 22 4.5 0.1 3.5 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C CobN-Mg_chel PF02514.11 gi|21228100|ref|NP_634022.1| - 0 1254.9 0.0 0 1254.7 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase DUF3479 PF11965.3 gi|21228100|ref|NP_634022.1| - 0.16 11.7 0.0 0.36 10.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) Nnf1 PF03980.9 gi|21228100|ref|NP_634022.1| - 0.44 10.5 2.9 1.8 8.6 0.2 2.9 3 0 0 3 3 3 0 Nnf1 OmdA PF13376.1 gi|21228100|ref|NP_634022.1| - 0.53 9.9 2.7 5.3 6.7 0.0 3.1 3 0 0 3 3 3 0 Bacteriocin-protection, YdeI or OmpD-Associated PQQ_2 PF13360.1 gi|21228101|ref|NP_634023.1| - 1.3e-16 60.7 0.0 3.3e-12 46.3 0.0 2.8 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.16 gi|21228101|ref|NP_634023.1| - 1.2e-12 46.6 1.4 0.065 12.8 0.1 5.7 5 0 0 5 5 5 3 PQQ enzyme repeat PQQ_3 PF13570.1 gi|21228101|ref|NP_634023.1| - 4e-12 46.0 2.6 0.63 10.3 0.1 6.9 6 0 0 6 6 6 3 PQQ-like domain PD40 PF07676.7 gi|21228101|ref|NP_634023.1| - 0.035 13.7 1.2 18 5.0 0.0 4.4 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat Arylsulfotrans PF05935.6 gi|21228101|ref|NP_634023.1| - 0.052 12.0 0.3 0.69 8.3 0.0 2.5 2 2 0 2 2 2 0 Arylsulfotransferase (ASST) WD40 PF00400.27 gi|21228101|ref|NP_634023.1| - 0.082 12.8 0.0 4.4 7.3 0.0 3.6 4 0 0 4 4 4 0 WD domain, G-beta repeat PQQ_2 PF13360.1 gi|21228102|ref|NP_634024.1| - 1.3e-10 41.2 0.5 9.7e-09 35.0 0.4 3.1 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.1 gi|21228102|ref|NP_634024.1| - 5.4e-10 39.2 8.1 0.0094 16.2 0.0 7.3 7 0 0 7 7 7 3 PQQ-like domain PQQ PF01011.16 gi|21228102|ref|NP_634024.1| - 1.2e-07 30.9 0.2 0.0051 16.2 0.0 5.3 6 0 0 6 6 6 2 PQQ enzyme repeat S-layer PF07752.6 gi|21228104|ref|NP_634026.1| - 2.7e-94 315.2 7.6 1.4e-75 253.8 0.3 3.0 2 1 0 2 2 2 2 S-layer protein VWA_2 PF13519.1 gi|21228105|ref|NP_634027.1| - 1e-20 74.5 0.0 2.1e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain Mg_chelatase PF01078.16 gi|21228105|ref|NP_634027.1| - 3.2e-13 49.3 0.1 2.7e-09 36.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI VWA PF00092.23 gi|21228105|ref|NP_634027.1| - 1.1e-11 44.7 0.0 2.6e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.9 gi|21228105|ref|NP_634027.1| - 3.9e-10 39.6 0.2 2.3e-06 27.4 0.0 2.9 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|21228105|ref|NP_634027.1| - 1.6e-05 25.0 0.0 7.1e-05 22.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain MCM PF00493.18 gi|21228105|ref|NP_634027.1| - 7.7e-05 21.6 6.0 0.00053 18.8 0.0 3.4 2 2 1 3 3 3 1 MCM2/3/5 family Sigma54_activat PF00158.21 gi|21228105|ref|NP_634027.1| - 0.0011 18.5 0.1 0.2 11.1 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_3 PF07726.6 gi|21228105|ref|NP_634027.1| - 0.0094 15.5 0.0 0.37 10.3 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|21228105|ref|NP_634027.1| - 0.015 15.3 0.0 0.05 13.5 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain VWA_3 PF13768.1 gi|21228105|ref|NP_634027.1| - 0.016 14.9 0.0 0.035 13.8 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain AAA PF00004.24 gi|21228105|ref|NP_634027.1| - 0.026 14.6 0.0 0.14 12.3 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BSMAP PF12280.3 gi|21228105|ref|NP_634027.1| - 0.12 12.2 2.8 0.2 11.5 1.9 1.4 1 0 0 1 1 1 0 Brain specific membrane anchored protein Ycf1 PF05758.7 gi|21228105|ref|NP_634027.1| - 0.79 7.3 10.6 1.1 6.9 7.4 1.1 1 0 0 1 1 1 0 Ycf1 Neur_chan_memb PF02932.11 gi|21228105|ref|NP_634027.1| - 5 6.9 5.0 7.3 6.3 3.5 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.9 gi|21228105|ref|NP_634027.1| - 5.5 4.9 14.6 8.6 4.2 10.1 1.2 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.7 gi|21228105|ref|NP_634027.1| - 8.3 6.2 14.6 13 5.6 10.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 FemAB PF02388.11 gi|21228105|ref|NP_634027.1| - 9.9 4.7 12.2 14 4.2 8.5 1.1 1 0 0 1 1 1 0 FemAB family DNA_pol_B PF00136.16 gi|21228106|ref|NP_634028.1| - 1.2e-110 370.4 0.0 1.7e-110 369.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|21228106|ref|NP_634028.1| - 5.3e-54 183.2 0.0 8.5e-54 182.5 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.4 gi|21228106|ref|NP_634028.1| - 0.0021 17.6 0.0 0.0043 16.6 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB PBP_like_2 PF12849.2 gi|21228107|ref|NP_634029.1| - 1.3e-50 172.5 3.3 2.3e-50 171.6 2.3 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.2 gi|21228107|ref|NP_634029.1| - 2.6e-23 81.9 0.0 3.2e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|21228107|ref|NP_634029.1| - 3.6e-08 33.3 0.0 2.6e-07 30.4 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|21228107|ref|NP_634029.1| - 0.067 12.9 0.3 0.22 11.2 0.2 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.17 gi|21228108|ref|NP_634030.1| - 8.2e-22 77.6 20.1 8.2e-22 77.6 13.9 2.2 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF1295 PF06966.7 gi|21228108|ref|NP_634030.1| - 0.48 9.6 0.0 0.48 9.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1295) DUF3816 PF12822.2 gi|21228109|ref|NP_634031.1| - 0.0077 16.1 4.2 0.011 15.6 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3816) DUF3333 PF11812.3 gi|21228109|ref|NP_634031.1| - 0.015 15.2 0.7 0.025 14.5 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) DUF2780 PF11075.3 gi|21228109|ref|NP_634031.1| - 0.03 14.3 0.1 0.043 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) DUF4260 PF14079.1 gi|21228109|ref|NP_634031.1| - 0.11 12.3 2.8 0.14 12.0 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) FeoB_C PF07664.7 gi|21228109|ref|NP_634031.1| - 5.2 6.5 5.8 2.6 7.5 1.2 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus MotA_ExbB PF01618.11 gi|21228109|ref|NP_634031.1| - 9.1 5.9 7.4 0.69 9.5 0.8 2.0 1 1 1 2 2 2 0 MotA/TolQ/ExbB proton channel family BPD_transp_1 PF00528.17 gi|21228110|ref|NP_634032.1| - 1.3e-05 24.7 5.3 2.5e-05 23.8 3.7 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.22 gi|21228111|ref|NP_634033.1| - 3.1e-32 111.7 0.0 4.4e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228111|ref|NP_634033.1| - 4.9e-15 56.2 0.0 2.2e-08 34.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228111|ref|NP_634033.1| - 1.7e-08 33.9 0.0 6.8e-07 28.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|21228111|ref|NP_634033.1| - 7e-05 22.0 0.0 0.00011 21.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|21228111|ref|NP_634033.1| - 0.00017 20.8 0.4 0.061 12.3 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21228111|ref|NP_634033.1| - 0.00034 20.7 0.0 0.0014 18.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21228111|ref|NP_634033.1| - 0.00039 19.8 0.0 0.00071 19.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_19 PF13245.1 gi|21228111|ref|NP_634033.1| - 0.00093 18.9 0.0 0.43 10.3 0.0 2.4 2 0 0 2 2 2 1 Part of AAA domain AAA_16 PF13191.1 gi|21228111|ref|NP_634033.1| - 0.0012 18.8 0.0 0.012 15.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.10 gi|21228111|ref|NP_634033.1| - 0.0019 16.9 0.0 0.0029 16.3 0.0 1.2 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_23 PF13476.1 gi|21228111|ref|NP_634033.1| - 0.0027 18.0 0.0 0.0049 17.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|21228111|ref|NP_634033.1| - 0.0038 17.1 0.0 0.0056 16.5 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.1 gi|21228111|ref|NP_634033.1| - 0.0053 15.2 0.1 0.22 9.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA PF00004.24 gi|21228111|ref|NP_634033.1| - 0.01 16.0 0.0 0.11 12.7 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 gi|21228111|ref|NP_634033.1| - 0.015 14.7 0.0 0.038 13.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|21228111|ref|NP_634033.1| - 0.017 15.0 0.1 0.24 11.3 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|21228111|ref|NP_634033.1| - 0.022 14.1 0.1 0.042 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA-like domain AAA_18 PF13238.1 gi|21228111|ref|NP_634033.1| - 0.024 14.9 0.0 0.042 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|21228111|ref|NP_634033.1| - 0.027 15.3 0.0 0.042 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|21228111|ref|NP_634033.1| - 0.058 12.9 0.0 0.23 10.9 0.0 1.9 2 1 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Arch_ATPase PF01637.13 gi|21228111|ref|NP_634033.1| - 0.068 12.8 0.1 0.2 11.3 0.1 2.0 1 1 0 1 1 1 0 Archaeal ATPase MMR_HSR1 PF01926.18 gi|21228111|ref|NP_634033.1| - 0.1 12.5 0.0 0.15 12.0 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase Adeno_IVa2 PF02456.10 gi|21228111|ref|NP_634033.1| - 0.13 10.8 0.1 0.41 9.2 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein PhoU PF01895.14 gi|21228112|ref|NP_634034.1| - 6.7e-33 112.9 6.8 1.5e-18 67.0 1.4 2.1 2 0 0 2 2 2 2 PhoU domain Amidohydro_4 PF13147.1 gi|21228113|ref|NP_634035.1| - 1.8e-29 103.6 0.0 2.6e-29 103.1 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|21228113|ref|NP_634035.1| - 7.2e-16 58.7 0.1 2.4e-15 57.0 0.0 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|21228113|ref|NP_634035.1| - 6.6e-11 41.8 0.3 1.9e-10 40.3 0.2 1.8 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|21228113|ref|NP_634035.1| - 0.00026 20.3 0.0 0.21 10.7 0.0 2.7 3 0 0 3 3 3 2 Amidohydrolase family KH_1 PF00013.24 gi|21228114|ref|NP_634036.1| - 1.9e-13 49.8 9.2 1.3e-09 37.5 0.9 2.3 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|21228114|ref|NP_634036.1| - 8.5e-08 31.6 2.5 7.7e-05 22.2 0.2 2.6 2 0 0 2 2 2 2 KH domain KH_2 PF07650.12 gi|21228114|ref|NP_634036.1| - 0.0019 17.6 4.1 0.68 9.5 0.2 2.5 2 0 0 2 2 2 2 KH domain Ribosomal_L6 PF00347.18 gi|21228114|ref|NP_634036.1| - 0.062 13.8 1.8 1.9 9.0 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L6 KH_4 PF13083.1 gi|21228114|ref|NP_634036.1| - 0.095 12.3 5.3 1.5 8.5 0.1 3.3 2 1 1 3 3 3 0 KH domain RIO1 PF01163.17 gi|21228115|ref|NP_634037.1| - 3.1e-63 212.5 0.3 4.3e-63 212.0 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|21228115|ref|NP_634037.1| - 3e-08 33.1 0.0 4.7e-08 32.5 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|21228115|ref|NP_634037.1| - 0.0003 20.6 0.0 0.0052 16.5 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.9 gi|21228115|ref|NP_634037.1| - 0.00056 19.0 0.4 0.0062 15.6 0.0 2.3 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.15 gi|21228115|ref|NP_634037.1| - 0.051 13.1 0.3 0.17 11.4 0.2 1.9 1 1 0 1 1 1 0 Choline/ethanolamine kinase eIF-1a PF01176.14 gi|21228116|ref|NP_634038.1| - 9.9e-21 72.9 0.2 1.2e-20 72.6 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 NAC PF01849.13 gi|21228117|ref|NP_634039.1| - 7.4e-19 67.0 4.6 1.3e-18 66.2 3.2 1.4 1 0 0 1 1 1 1 NAC domain UBA PF00627.26 gi|21228117|ref|NP_634039.1| - 2e-07 30.6 0.2 2e-07 30.6 0.1 2.2 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.1 gi|21228117|ref|NP_634039.1| - 0.00014 21.3 0.1 0.0002 20.8 0.1 1.2 1 0 0 1 1 1 1 UBA-like domain DUF4097 PF13349.1 gi|21228117|ref|NP_634039.1| - 0.0088 15.6 0.1 0.0098 15.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4097) TIP49 PF06068.8 gi|21228117|ref|NP_634039.1| - 0.025 13.2 2.6 0.03 13.0 1.8 1.0 1 0 0 1 1 1 0 TIP49 C-terminus SANTA PF09133.5 gi|21228117|ref|NP_634039.1| - 0.064 13.2 0.2 0.081 12.8 0.2 1.2 1 0 0 1 1 1 0 SANTA (SANT Associated) DUF1212 PF06738.7 gi|21228117|ref|NP_634039.1| - 0.077 12.4 0.5 0.27 10.6 0.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1212) PepSY_2 PF13670.1 gi|21228117|ref|NP_634039.1| - 0.079 12.8 0.3 1.7 8.5 0.1 2.2 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain RTC4 PF14474.1 gi|21228117|ref|NP_634039.1| - 0.094 12.6 0.3 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 RTC4-like domain LigB PF02900.13 gi|21228117|ref|NP_634039.1| - 0.12 11.3 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase zf-ZPR1 PF03367.8 gi|21228117|ref|NP_634039.1| - 0.14 11.2 1.4 0.16 11.1 1.0 1.1 1 0 0 1 1 1 0 ZPR1 zinc-finger domain DUF3867 PF12983.2 gi|21228117|ref|NP_634039.1| - 0.16 11.9 2.5 0.27 11.2 1.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3867) NMT1 PF09084.6 gi|21228117|ref|NP_634039.1| - 0.17 11.4 1.7 0.21 11.1 1.2 1.3 1 1 0 1 1 1 0 NMT1/THI5 like IL2 PF00715.12 gi|21228117|ref|NP_634039.1| - 0.18 11.5 0.7 0.32 10.7 0.4 1.7 1 1 0 1 1 1 0 Interleukin 2 ANTAR PF03861.9 gi|21228117|ref|NP_634039.1| - 0.27 10.8 1.6 0.94 9.1 0.0 2.6 3 1 1 4 4 4 0 ANTAR domain HSP20 PF00011.16 gi|21228117|ref|NP_634039.1| - 0.46 10.3 4.0 4.1 7.3 0.6 2.1 2 0 0 2 2 2 0 Hsp20/alpha crystallin family Lumazine_bd PF12870.2 gi|21228117|ref|NP_634039.1| - 4.4 7.3 6.2 31 4.6 0.0 2.1 1 1 1 2 2 2 0 Lumazine-binding domain Fe-S_biosyn PF01521.15 gi|21228118|ref|NP_634040.1| - 2.6e-13 49.8 0.0 3.2e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis DUF4425 PF14466.1 gi|21228119|ref|NP_634041.1| - 0.017 15.2 0.0 0.043 13.9 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4425) GDE_C PF06202.9 gi|21228120|ref|NP_634042.1| - 3e-149 496.7 0.0 5.9e-149 495.7 0.0 1.4 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|21228120|ref|NP_634042.1| - 2.1e-69 233.1 0.0 2.9e-69 232.7 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.8 gi|21228120|ref|NP_634042.1| - 7.8e-05 21.5 0.4 0.00024 19.9 0.3 1.7 1 1 0 1 1 1 1 Protein of unknown function, DUF608 Bac_rhamnosid PF05592.6 gi|21228120|ref|NP_634042.1| - 0.0084 14.3 0.0 0.011 13.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase Glyco_hydro_100 PF12899.2 gi|21228120|ref|NP_634042.1| - 0.02 13.2 0.1 1.9 6.8 0.0 2.8 2 1 0 2 2 2 0 Alkaline and neutral invertase PRA-CH PF01502.13 gi|21228121|ref|NP_634043.1| - 1e-38 130.8 0.6 1.2e-38 130.5 0.4 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase T2SE PF00437.15 gi|21228122|ref|NP_634044.1| - 1.2e-12 47.2 0.2 2.2e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.24 gi|21228122|ref|NP_634044.1| - 2.4e-10 39.9 1.4 7.6e-10 38.2 1.0 1.9 1 0 0 1 1 1 1 KH domain PIN_4 PF13638.1 gi|21228122|ref|NP_634044.1| - 6.5e-05 23.0 0.0 0.00017 21.7 0.0 1.7 1 0 0 1 1 1 1 PIN domain AAA_22 PF13401.1 gi|21228122|ref|NP_634044.1| - 0.00011 22.3 0.0 0.086 12.9 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_17 PF13207.1 gi|21228122|ref|NP_634044.1| - 0.00016 22.4 0.0 0.00053 20.8 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21228122|ref|NP_634044.1| - 0.00029 20.5 0.0 0.00096 18.8 0.0 1.9 1 0 0 1 1 1 1 Part of AAA domain TIP49 PF06068.8 gi|21228122|ref|NP_634044.1| - 0.00054 18.7 0.4 0.0015 17.3 0.0 1.8 2 0 0 2 2 2 1 TIP49 C-terminus Zeta_toxin PF06414.7 gi|21228122|ref|NP_634044.1| - 0.00097 18.2 0.0 0.0019 17.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin KH_2 PF07650.12 gi|21228122|ref|NP_634044.1| - 0.0013 18.2 1.2 0.005 16.3 0.8 2.0 1 0 0 1 1 1 1 KH domain KH_3 PF13014.1 gi|21228122|ref|NP_634044.1| - 0.0013 18.3 0.5 0.0043 16.6 0.4 1.8 1 0 0 1 1 1 1 KH domain AAA_16 PF13191.1 gi|21228122|ref|NP_634044.1| - 0.0015 18.5 0.0 0.0028 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.1 gi|21228122|ref|NP_634044.1| - 0.0038 17.0 0.0 0.0083 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain KH_4 PF13083.1 gi|21228122|ref|NP_634044.1| - 0.0052 16.4 0.3 0.018 14.6 0.2 1.9 1 0 0 1 1 1 1 KH domain KaiC PF06745.8 gi|21228122|ref|NP_634044.1| - 0.01 14.9 0.0 0.059 12.4 0.0 2.3 2 1 1 3 3 3 0 KaiC AAA PF00004.24 gi|21228122|ref|NP_634044.1| - 0.014 15.5 0.0 0.037 14.2 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.1 gi|21228122|ref|NP_634044.1| - 0.017 14.6 0.0 0.043 13.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.10 gi|21228122|ref|NP_634044.1| - 0.018 14.7 0.0 0.055 13.1 0.0 1.8 1 0 0 1 1 1 0 NTPase AAA_25 PF13481.1 gi|21228122|ref|NP_634044.1| - 0.022 14.1 0.0 0.052 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|21228122|ref|NP_634044.1| - 0.023 15.0 0.0 0.061 13.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|21228122|ref|NP_634044.1| - 0.033 13.9 0.0 0.094 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.15 gi|21228122|ref|NP_634044.1| - 0.035 13.7 0.0 0.29 10.7 0.0 2.2 2 0 0 2 2 2 0 Adenylylsulphate kinase IstB_IS21 PF01695.12 gi|21228122|ref|NP_634044.1| - 0.047 13.1 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.1 gi|21228122|ref|NP_634044.1| - 0.053 13.0 0.1 0.13 11.7 0.0 1.6 2 0 0 2 2 1 0 AAA domain KTI12 PF08433.5 gi|21228122|ref|NP_634044.1| - 0.062 12.4 0.0 0.12 11.5 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_11 PF13086.1 gi|21228122|ref|NP_634044.1| - 0.087 12.3 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|21228122|ref|NP_634044.1| - 0.096 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.12 gi|21228122|ref|NP_634044.1| - 0.12 11.7 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 Thymidylate kinase ATP_bind_1 PF03029.12 gi|21228122|ref|NP_634044.1| - 0.12 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein UPF0079 PF02367.12 gi|21228122|ref|NP_634044.1| - 0.13 11.8 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 NACHT PF05729.7 gi|21228122|ref|NP_634044.1| - 0.14 11.7 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain PPV_E1_C PF00519.12 gi|21228122|ref|NP_634044.1| - 0.35 9.4 0.0 0.52 8.8 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase TBPIP PF07106.8 gi|21228123|ref|NP_634045.1| - 0.023 14.2 2.0 0.92 9.0 0.2 2.2 2 0 0 2 2 2 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Prefoldin_2 PF01920.15 gi|21228123|ref|NP_634045.1| - 0.035 13.8 4.3 2.2 8.0 0.0 2.8 2 1 1 3 3 3 0 Prefoldin subunit DUF4631 PF15450.1 gi|21228123|ref|NP_634045.1| - 0.037 12.3 0.8 0.18 10.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4631) Reo_sigmaC PF04582.7 gi|21228123|ref|NP_634045.1| - 0.038 13.1 1.4 0.049 12.7 0.6 1.5 2 0 0 2 2 2 0 Reovirus sigma C capsid protein Prefoldin_3 PF13758.1 gi|21228123|ref|NP_634045.1| - 0.044 13.5 1.7 0.3 10.8 0.1 2.5 2 1 0 2 2 2 0 Prefoldin subunit Baculo_PEP_C PF04513.7 gi|21228123|ref|NP_634045.1| - 0.053 13.3 0.1 0.22 11.3 0.0 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.7 gi|21228123|ref|NP_634045.1| - 0.1 12.4 0.3 1.1 9.0 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.6 gi|21228123|ref|NP_634045.1| - 0.11 12.4 2.4 0.5 10.2 0.0 2.8 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Sipho_Gp157 PF05565.6 gi|21228123|ref|NP_634045.1| - 0.12 11.9 0.9 6.4 6.3 0.1 2.3 2 0 0 2 2 2 0 Siphovirus Gp157 DUF4164 PF13747.1 gi|21228123|ref|NP_634045.1| - 0.21 11.7 2.4 0.35 11.0 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) Myosin_tail_1 PF01576.14 gi|21228123|ref|NP_634045.1| - 0.87 7.2 3.2 0.37 8.4 0.2 1.7 2 0 0 2 2 2 0 Myosin tail TMF_DNA_bd PF12329.3 gi|21228123|ref|NP_634045.1| - 0.92 9.3 3.0 2.4 8.0 0.3 2.5 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF4140 PF13600.1 gi|21228123|ref|NP_634045.1| - 1.2 9.6 3.9 11 6.5 0.1 2.9 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) MAGE_N PF12440.3 gi|21228123|ref|NP_634045.1| - 2.9 8.2 6.7 22 5.4 4.7 2.1 1 1 0 1 1 1 0 Melanoma associated antigen family N terminal LysE PF01810.13 gi|21228124|ref|NP_634046.1| - 8e-20 70.9 16.4 1.9e-18 66.4 11.4 2.0 1 1 0 1 1 1 1 LysE type translocator Phtf-FEM1B_bdg PF12129.3 gi|21228124|ref|NP_634046.1| - 0.22 10.8 1.5 0.23 10.7 0.2 1.6 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor DUF3185 PF11381.3 gi|21228124|ref|NP_634046.1| - 1.1 9.1 6.8 7.9 6.3 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) YiaAB PF05360.9 gi|21228124|ref|NP_634046.1| - 5.5 6.6 15.0 32 4.1 0.2 4.6 3 1 1 4 4 4 0 yiaA/B two helix domain CarboxypepD_reg PF13620.1 gi|21228125|ref|NP_634047.1| - 0.016 15.2 0.0 0.054 13.5 0.0 1.9 1 1 1 2 2 2 0 Carboxypeptidase regulatory-like domain CarboxypepD_reg PF13620.1 gi|21228126|ref|NP_634048.1| - 1.7e-05 24.8 0.9 8.2e-05 22.5 0.6 2.1 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain Big_1 PF02369.11 gi|21228126|ref|NP_634048.1| - 7.2e-05 22.6 2.2 0.00011 21.9 1.5 1.3 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) DUF824 PF05688.6 gi|21228126|ref|NP_634048.1| - 0.006 16.2 0.1 0.015 14.9 0.1 1.6 1 0 0 1 1 1 1 Salmonella repeat of unknown function (DUF824) DUF4480 PF13715.1 gi|21228126|ref|NP_634048.1| - 0.021 14.8 0.2 0.051 13.6 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4480) MMgT PF10270.4 gi|21228126|ref|NP_634048.1| - 0.046 14.1 0.2 0.064 13.6 0.1 1.3 1 0 0 1 1 1 0 Membrane magnesium transporter Alpha_adaptin_C PF02296.11 gi|21228126|ref|NP_634048.1| - 0.085 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain ABC2_membrane_2 PF12679.2 gi|21228127|ref|NP_634049.1| - 5.9 5.6 10.2 1.6 7.4 1.9 2.0 2 0 0 2 2 2 0 ABC-2 family transporter protein HEAT_2 PF13646.1 gi|21228130|ref|NP_634052.1| - 8.4e-51 170.2 6.1 3.6e-12 46.3 0.0 7.1 4 2 3 7 7 7 6 HEAT repeats HEAT PF02985.17 gi|21228130|ref|NP_634052.1| - 3e-33 110.8 5.4 0.037 14.1 0.0 13.4 13 0 0 13 13 13 7 HEAT repeat HEAT_EZ PF13513.1 gi|21228130|ref|NP_634052.1| - 9.6e-28 95.9 4.9 0.00058 20.2 0.0 9.5 6 4 4 10 10 10 8 HEAT-like repeat Adaptin_N PF01602.15 gi|21228130|ref|NP_634052.1| - 1.3e-20 73.2 1.8 5.2e-05 21.7 0.0 5.8 1 1 2 4 4 4 4 Adaptin N terminal region CLASP_N PF12348.3 gi|21228130|ref|NP_634052.1| - 2.2e-10 40.2 2.6 0.041 13.2 0.1 5.9 3 2 4 7 7 7 4 CLASP N terminal ParD PF09386.5 gi|21228130|ref|NP_634052.1| - 8e-06 25.8 22.7 11 6.2 0.0 10.7 8 3 3 12 12 10 0 Antitoxin ParD DUF2536 PF10750.4 gi|21228130|ref|NP_634052.1| - 0.0032 17.0 0.6 0.029 13.9 0.4 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2536) HGD-D PF06050.8 gi|21228130|ref|NP_634052.1| - 0.0035 16.2 0.8 20 3.8 0.0 4.5 5 0 0 5 5 5 0 2-hydroxyglutaryl-CoA dehydratase, D-component FAA_hydrolase_N PF09298.6 gi|21228130|ref|NP_634052.1| - 0.0048 16.8 4.4 7 6.7 0.3 5.4 4 2 0 4 4 4 1 Fumarylacetoacetase N-terminal PAS_11 PF14598.1 gi|21228130|ref|NP_634052.1| - 0.0087 16.0 1.9 3.5 7.6 0.0 5.0 4 1 2 6 6 6 1 PAS domain TFCD_C PF12612.3 gi|21228130|ref|NP_634052.1| - 0.026 13.9 0.3 8.4 5.7 0.0 3.9 3 1 0 3 3 3 0 Tubulin folding cofactor D C terminal HEAT_PBS PF03130.11 gi|21228130|ref|NP_634052.1| - 0.12 12.8 14.7 75 4.2 0.0 7.2 6 0 0 6 6 6 0 PBS lyase HEAT-like repeat Arm PF00514.18 gi|21228130|ref|NP_634052.1| - 0.17 11.7 2.3 83 3.2 0.0 5.5 7 0 0 7 7 7 0 Armadillo/beta-catenin-like repeat ATP-synt_DE PF00401.15 gi|21228130|ref|NP_634052.1| - 0.32 10.9 6.9 0.25 11.2 2.5 2.7 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DUF3728 PF12528.3 gi|21228130|ref|NP_634052.1| - 0.69 10.3 12.5 11 6.5 0.1 6.2 4 2 3 7 7 7 0 Prepilin peptidase dependent protein C (DUF3728) P4Ha_N PF08336.6 gi|21228130|ref|NP_634052.1| - 3.2 7.5 10.6 67 3.2 0.1 5.6 4 2 2 7 7 7 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region NCD3G PF07562.9 gi|21228131|ref|NP_634053.1| - 0.3 10.8 5.0 0.7 9.6 3.4 1.9 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR zf-HIT PF04438.11 gi|21228131|ref|NP_634053.1| - 3.8 7.2 8.1 9.7 5.9 5.6 1.9 1 1 0 1 1 1 0 HIT zinc finger GATase PF00117.23 gi|21228132|ref|NP_634054.1| - 1.3e-31 109.5 0.0 1.5e-31 109.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21228132|ref|NP_634054.1| - 8.4e-08 31.9 0.0 1.6e-07 30.9 0.0 1.4 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.9 gi|21228132|ref|NP_634054.1| - 9.4e-08 31.8 0.2 1.1e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.14 gi|21228132|ref|NP_634054.1| - 2.1e-07 30.7 0.0 9.6e-07 28.6 0.0 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family DJ-1_PfpI PF01965.19 gi|21228132|ref|NP_634054.1| - 0.0063 15.9 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.1 gi|21228132|ref|NP_634054.1| - 0.041 12.7 0.0 0.5 9.2 0.0 2.1 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.17 gi|21228133|ref|NP_634055.1| - 7.1e-18 65.0 1.4 1.2e-17 64.3 1.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|21228133|ref|NP_634055.1| - 1.1e-14 54.4 0.1 1e-13 51.3 0.0 2.3 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain NfeD PF01957.13 gi|21228134|ref|NP_634056.1| - 9e-35 119.9 2.8 9e-35 119.9 2.0 2.4 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.18 gi|21228134|ref|NP_634056.1| - 1.8e-05 24.5 0.2 2.9e-05 23.8 0.2 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.11 gi|21228134|ref|NP_634056.1| - 0.029 13.1 0.4 0.05 12.3 0.3 1.4 1 0 0 1 1 1 0 Serine dehydrogenase proteinase FMN_dh PF01070.13 gi|21228134|ref|NP_634056.1| - 0.059 12.2 0.0 0.083 11.7 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase ECH PF00378.15 gi|21228134|ref|NP_634056.1| - 0.08 12.0 0.1 1 8.4 0.1 2.1 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase family DUF1450 PF07293.6 gi|21228134|ref|NP_634056.1| - 0.082 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) Band_7 PF01145.20 gi|21228135|ref|NP_634057.1| - 4.4e-39 134.2 3.0 6.3e-39 133.7 2.1 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.1 gi|21228135|ref|NP_634057.1| - 8.4e-05 22.1 0.1 0.00013 21.5 0.1 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family Ground-like PF04155.13 gi|21228135|ref|NP_634057.1| - 0.057 13.7 0.0 0.13 12.5 0.0 1.7 1 0 0 1 1 1 0 Ground-like domain DHH PF01368.15 gi|21228136|ref|NP_634058.1| - 3.2e-11 43.0 0.1 7.5e-11 41.8 0.1 1.6 1 1 0 1 1 1 1 DHH family tRNA_anti-codon PF01336.20 gi|21228136|ref|NP_634058.1| - 9.3e-10 38.2 0.0 2.3e-09 36.9 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DnaJ_CXXCXGXG PF00684.14 gi|21228136|ref|NP_634058.1| - 2.5e-08 33.8 8.3 2.5e-08 33.8 5.8 2.7 1 1 2 3 3 3 1 DnaJ central domain S1 PF00575.18 gi|21228136|ref|NP_634058.1| - 0.00014 21.8 0.4 0.00046 20.2 0.3 1.9 1 0 0 1 1 1 1 S1 RNA binding domain Flavi_glycop_C PF02832.11 gi|21228136|ref|NP_634058.1| - 0.098 12.5 0.8 11 5.9 0.1 2.8 2 0 0 2 2 2 0 Flavivirus glycoprotein, immunoglobulin-like domain Pribosyltran PF00156.22 gi|21228137|ref|NP_634059.1| - 3.9e-23 81.5 0.3 6e-23 80.9 0.2 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|21228137|ref|NP_634059.1| - 5.7e-07 29.0 0.7 7.8e-06 25.3 0.5 2.1 1 1 0 1 1 1 1 Phosphoribosyl transferase UPRTase PF14681.1 gi|21228137|ref|NP_634059.1| - 4e-05 22.9 1.3 0.0001 21.5 0.2 1.9 1 1 0 2 2 2 1 Uracil phosphoribosyltransferase HTH_7 PF02796.10 gi|21228137|ref|NP_634059.1| - 0.00021 21.0 0.0 0.0005 19.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4_2 PF08281.7 gi|21228137|ref|NP_634059.1| - 0.0014 18.0 0.0 0.03 13.7 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|21228137|ref|NP_634059.1| - 0.0026 17.3 0.0 0.0056 16.2 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain PRTase_3 PF15610.1 gi|21228137|ref|NP_634059.1| - 0.0084 15.0 0.2 0.059 12.2 0.0 1.9 1 1 1 2 2 2 1 PRTase ComF-like GerE PF00196.14 gi|21228137|ref|NP_634059.1| - 0.013 14.7 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_11 PF08279.7 gi|21228137|ref|NP_634059.1| - 0.016 14.8 0.1 0.046 13.3 0.0 1.8 2 0 0 2 2 2 0 HTH domain DUF2481 PF10654.4 gi|21228137|ref|NP_634059.1| - 0.043 13.5 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) Sigma70_r4 PF04545.11 gi|21228137|ref|NP_634059.1| - 0.079 12.2 0.0 0.26 10.6 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 PIN_4 PF13638.1 gi|21228138|ref|NP_634060.1| - 0.0014 18.7 0.3 0.0022 18.1 0.2 1.3 1 1 0 1 1 1 1 PIN domain zinc-ribbons_6 PF07191.7 gi|21228138|ref|NP_634060.1| - 0.013 15.2 0.6 0.03 14.1 0.4 1.6 1 0 0 1 1 1 0 zinc-ribbons PIN PF01850.16 gi|21228138|ref|NP_634060.1| - 0.014 15.6 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 PIN domain DNA_ligase_ZBD PF03119.11 gi|21228138|ref|NP_634060.1| - 0.045 13.4 0.2 0.091 12.4 0.1 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain UPF0278 PF08745.6 gi|21228138|ref|NP_634060.1| - 0.051 12.8 0.4 0.1 11.8 0.2 1.5 1 1 1 2 2 2 0 UPF0278 family DUF4411 PF14367.1 gi|21228138|ref|NP_634060.1| - 0.057 13.1 0.1 0.1 12.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) zf-C4_Topoisom PF01396.14 gi|21228138|ref|NP_634060.1| - 0.074 12.5 1.8 0.18 11.3 1.2 1.6 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|21228138|ref|NP_634060.1| - 0.1 12.2 0.9 0.17 11.5 0.7 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Rad50_zn_hook PF04423.9 gi|21228138|ref|NP_634060.1| - 0.51 9.8 7.3 0.13 11.7 2.2 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif Prok-RING_1 PF14446.1 gi|21228138|ref|NP_634060.1| - 0.64 9.7 4.0 1.7 8.4 2.8 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 DUF2072 PF09845.4 gi|21228138|ref|NP_634060.1| - 1.5 8.7 5.6 1.8 8.5 2.0 2.1 2 0 0 2 2 2 0 Zn-ribbon containing protein (DUF2072) DUF169 PF02596.10 gi|21228139|ref|NP_634061.1| - 9.9e-69 231.0 0.1 1.1e-68 230.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Ribosomal_S8e PF01201.17 gi|21228141|ref|NP_634063.1| - 7.9e-36 123.1 7.1 8.6e-36 122.9 4.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e AsnC_trans_reg PF01037.16 gi|21228142|ref|NP_634064.1| - 2.1e-17 62.6 0.1 4.8e-17 61.4 0.1 1.6 2 0 0 2 2 2 1 AsnC family HTH_24 PF13412.1 gi|21228142|ref|NP_634064.1| - 1.3e-11 43.6 0.0 3.9e-11 42.1 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|21228142|ref|NP_634064.1| - 8.9e-10 37.9 0.1 2.4e-09 36.5 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.2 gi|21228142|ref|NP_634064.1| - 6e-06 25.9 0.0 1.1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|21228142|ref|NP_634064.1| - 3.3e-05 23.4 0.0 6.2e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|21228142|ref|NP_634064.1| - 4.9e-05 23.0 0.0 0.00019 21.1 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TFIIE_alpha PF02002.12 gi|21228142|ref|NP_634064.1| - 9.4e-05 21.8 0.3 0.00017 21.0 0.2 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.7 gi|21228142|ref|NP_634064.1| - 9.8e-05 21.9 0.1 0.00031 20.3 0.1 1.9 1 1 0 1 1 1 1 HTH domain MarR PF01047.17 gi|21228142|ref|NP_634064.1| - 0.0008 19.0 0.1 0.0016 18.1 0.1 1.5 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.14 gi|21228142|ref|NP_634064.1| - 0.0012 18.6 0.3 0.0032 17.3 0.2 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.1 gi|21228142|ref|NP_634064.1| - 0.0029 17.5 0.0 0.0054 16.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|21228142|ref|NP_634064.1| - 0.004 17.0 0.1 0.007 16.2 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.1 gi|21228142|ref|NP_634064.1| - 0.0049 16.4 0.1 0.011 15.3 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2513 PF10711.4 gi|21228142|ref|NP_634064.1| - 0.0065 16.5 0.3 0.013 15.5 0.1 1.6 2 0 0 2 2 2 1 Hypothetical protein (DUF2513) Rrf2 PF02082.15 gi|21228142|ref|NP_634064.1| - 0.034 14.2 0.1 0.14 12.2 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator HTH_27 PF13463.1 gi|21228142|ref|NP_634064.1| - 0.035 14.4 0.1 0.087 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain RepL PF05732.6 gi|21228142|ref|NP_634064.1| - 0.037 13.2 0.1 0.079 12.1 0.1 1.5 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.1 gi|21228142|ref|NP_634064.1| - 0.048 13.7 0.0 0.086 12.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.5 gi|21228142|ref|NP_634064.1| - 0.063 12.8 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain FaeA PF04703.7 gi|21228142|ref|NP_634064.1| - 0.063 13.4 0.1 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein Phage_rep_org_N PF09681.5 gi|21228142|ref|NP_634064.1| - 0.087 12.3 0.1 1.6 8.3 0.0 2.3 1 1 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) RPA_C PF08784.6 gi|21228142|ref|NP_634064.1| - 0.11 12.9 0.2 0.24 11.8 0.1 1.6 1 0 0 1 1 1 0 Replication protein A C terminal TrmB PF01978.14 gi|21228142|ref|NP_634064.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Aminotran_1_2 PF00155.16 gi|21228143|ref|NP_634065.1| - 1.7e-60 204.9 0.0 1.9e-60 204.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|21228143|ref|NP_634065.1| - 2.9e-12 46.3 0.5 4.4e-12 45.7 0.3 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|21228143|ref|NP_634065.1| - 1e-06 27.7 0.0 1.5e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|21228143|ref|NP_634065.1| - 0.00013 21.2 0.0 0.00021 20.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.15 gi|21228143|ref|NP_634065.1| - 0.0016 17.1 0.0 0.0023 16.5 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Cys_Met_Meta_PP PF01053.15 gi|21228143|ref|NP_634065.1| - 0.0029 15.9 0.2 0.0054 15.0 0.1 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.8 gi|21228143|ref|NP_634065.1| - 0.044 12.4 0.0 0.54 8.8 0.0 2.1 2 0 0 2 2 2 0 Allinase TrmB PF01978.14 gi|21228144|ref|NP_634066.1| - 5.1e-19 67.7 0.2 9.8e-19 66.8 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|21228144|ref|NP_634066.1| - 9.7e-05 21.8 0.6 0.00044 19.7 0.1 1.9 1 1 1 2 2 2 1 TFIIE alpha subunit HTH_11 PF08279.7 gi|21228144|ref|NP_634066.1| - 0.002 17.7 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 HTH domain MarR PF01047.17 gi|21228144|ref|NP_634066.1| - 0.0041 16.8 0.2 0.016 14.8 0.0 2.1 2 1 1 3 3 3 1 MarR family HTH_IclR PF09339.5 gi|21228144|ref|NP_634066.1| - 0.0054 16.2 0.0 0.0086 15.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|21228144|ref|NP_634066.1| - 0.015 14.9 0.1 0.065 12.9 0.0 2.0 3 0 0 3 3 3 0 MarR family HTH_5 PF01022.15 gi|21228144|ref|NP_634066.1| - 0.024 14.2 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF1351 PF07083.6 gi|21228144|ref|NP_634066.1| - 0.028 14.0 1.3 0.05 13.2 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) Penicillinase_R PF03965.11 gi|21228144|ref|NP_634066.1| - 0.067 13.2 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Penicillinase repressor PvlArgDC PF01862.11 gi|21228144|ref|NP_634066.1| - 0.072 12.6 0.1 0.094 12.3 0.0 1.2 1 0 0 1 1 1 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Pox_F11 PF04943.7 gi|21228144|ref|NP_634066.1| - 0.076 11.8 0.7 0.083 11.7 0.5 1.0 1 0 0 1 1 1 0 Poxvirus F11 protein HTH_27 PF13463.1 gi|21228144|ref|NP_634066.1| - 0.092 13.0 0.0 0.37 11.1 0.0 1.8 1 1 1 2 2 2 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|21228144|ref|NP_634066.1| - 0.27 10.6 1.5 1.3 8.4 0.0 2.5 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding EamA PF00892.15 gi|21228148|ref|NP_634070.1| - 1.1e-11 44.8 47.1 3.1e-08 33.6 10.6 4.2 3 2 2 5 5 5 2 EamA-like transporter family EmrE PF13536.1 gi|21228148|ref|NP_634070.1| - 5.5e-10 39.4 12.4 5.5e-10 39.4 8.6 3.8 3 1 1 4 4 4 1 Multidrug resistance efflux transporter DUF1440 PF07274.7 gi|21228148|ref|NP_634070.1| - 2 8.3 9.8 0.32 11.0 1.8 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1440) B12-binding PF02310.14 gi|21228149|ref|NP_634071.1| - 9.2e-23 80.3 0.7 1.8e-22 79.4 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21228149|ref|NP_634071.1| - 1.1e-18 66.9 2.2 1.8e-18 66.3 0.5 2.0 2 0 0 2 2 2 1 B12 binding domain Pox_P4B PF03292.9 gi|21228149|ref|NP_634071.1| - 0.089 10.7 0.1 0.11 10.4 0.1 1.1 1 0 0 1 1 1 0 Poxvirus P4B major core protein MTTB PF06253.6 gi|21228150|ref|NP_634072.1| - 1.1e-25 89.4 0.0 1.2e-25 89.2 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) MTTB PF06253.6 gi|21228151|ref|NP_634073.1| - 1e-52 178.5 0.0 1.3e-52 178.2 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) Dimeth_Pyl PF09505.5 gi|21228152|ref|NP_634074.1| - 1.5e-58 198.2 1.7 1.7e-58 198.0 1.2 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) Vps39_2 PF10367.4 gi|21228152|ref|NP_634074.1| - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Dimeth_Pyl PF09505.5 gi|21228153|ref|NP_634075.1| - 1.3e-244 811.6 6.2 1.5e-244 811.4 4.3 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) XFP_C PF09363.5 gi|21228153|ref|NP_634075.1| - 0.011 15.1 0.1 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 XFP C-terminal domain B12-binding PF02310.14 gi|21228154|ref|NP_634076.1| - 4.4e-26 91.1 0.5 8.6e-26 90.1 0.3 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21228154|ref|NP_634076.1| - 5.2e-19 68.0 1.4 9.7e-19 67.1 1.0 1.5 1 0 0 1 1 1 1 B12 binding domain ComA PF02679.10 gi|21228154|ref|NP_634076.1| - 0.022 13.8 0.3 0.1 11.6 0.0 1.9 2 0 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) SpoVAD PF07451.6 gi|21228154|ref|NP_634076.1| - 0.026 12.9 0.1 0.035 12.5 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) UPF0051 PF01458.12 gi|21228156|ref|NP_634078.1| - 3.5e-47 160.7 0.1 4.5e-47 160.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.22 gi|21228157|ref|NP_634079.1| - 2.6e-25 89.3 0.1 3.4e-25 88.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228157|ref|NP_634079.1| - 2.2e-13 50.8 0.6 1.4e-06 28.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228157|ref|NP_634079.1| - 1.2e-11 44.2 0.1 2.1e-07 30.4 0.0 2.0 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_13 PF13166.1 gi|21228157|ref|NP_634079.1| - 0.0012 17.4 0.0 0.17 10.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|21228157|ref|NP_634079.1| - 0.0074 15.8 0.0 0.017 14.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21228157|ref|NP_634079.1| - 0.009 16.1 0.5 0.027 14.6 0.4 1.7 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|21228157|ref|NP_634079.1| - 0.029 14.7 1.0 0.06 13.6 0.7 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|21228157|ref|NP_634079.1| - 0.041 13.2 0.1 0.083 12.2 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|21228157|ref|NP_634079.1| - 0.047 13.5 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|21228157|ref|NP_634079.1| - 0.051 13.4 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|21228157|ref|NP_634079.1| - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTP_transf_3 PF12804.2 gi|21228158|ref|NP_634080.1| - 3.9e-17 62.8 0.0 4.6e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|21228158|ref|NP_634080.1| - 3.7e-09 36.5 0.0 1.9e-08 34.1 0.0 1.9 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 gi|21228158|ref|NP_634080.1| - 9.9e-09 35.0 0.0 1.8e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|21228158|ref|NP_634080.1| - 0.00078 18.8 0.0 0.001 18.4 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase CofC PF01983.11 gi|21228158|ref|NP_634080.1| - 0.025 13.5 0.1 0.032 13.2 0.1 1.3 1 1 0 1 1 1 0 Guanylyl transferase CofC like DUF2064 PF09837.4 gi|21228158|ref|NP_634080.1| - 0.09 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) LIP PF03583.9 gi|21228158|ref|NP_634080.1| - 0.12 11.5 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase CobS PF02654.10 gi|21228159|ref|NP_634081.1| - 3.8e-49 167.4 10.9 8.1e-49 166.3 7.5 1.5 1 1 0 1 1 1 1 Cobalamin-5-phosphate synthase Dispanin PF04505.7 gi|21228159|ref|NP_634081.1| - 0.022 14.2 0.2 0.086 12.3 0.1 2.0 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF2755 PF10954.3 gi|21228159|ref|NP_634081.1| - 0.25 11.0 2.9 8.9 6.0 0.0 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2755) PgpA PF04608.8 gi|21228160|ref|NP_634082.1| - 2.2e-09 37.2 0.0 2.9e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobD_Cbib PF03186.8 gi|21228161|ref|NP_634083.1| - 1.5e-99 332.7 0.1 1.8e-99 332.5 0.1 1.0 1 0 0 1 1 1 1 CobD/Cbib protein Aminotran_1_2 PF00155.16 gi|21228162|ref|NP_634084.1| - 3.1e-43 148.1 0.0 3.8e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.7 gi|21228162|ref|NP_634084.1| - 4.9e-32 109.4 7.3 1e-31 108.4 5.1 1.4 1 0 0 1 1 1 1 Cysteine-rich small domain DUF2521 PF10730.4 gi|21228162|ref|NP_634084.1| - 0.12 12.2 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2521) tRNA-synt_His PF13393.1 gi|21228163|ref|NP_634085.1| - 3e-59 200.5 0.0 4.1e-59 200.1 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|21228163|ref|NP_634085.1| - 1.3e-22 80.1 0.0 2.3e-22 79.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|21228163|ref|NP_634085.1| - 2.3e-14 53.1 0.1 4e-14 52.3 0.1 1.4 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.15 gi|21228163|ref|NP_634085.1| - 5e-05 22.2 0.6 0.31 9.7 0.0 2.6 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.15 gi|21228163|ref|NP_634085.1| - 0.023 13.8 0.0 0.11 11.7 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) SurE PF01975.12 gi|21228164|ref|NP_634086.1| - 0.14 11.4 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Survival protein SurE Ribosomal_S13_N PF08069.7 gi|21228168|ref|NP_634090.1| - 6.6e-26 89.9 0.3 1.7e-25 88.5 0.2 1.7 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|21228168|ref|NP_634090.1| - 8.4e-21 73.5 0.4 1.1e-20 73.1 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 ABC_tran PF00005.22 gi|21228169|ref|NP_634091.1| - 1.3e-29 103.2 0.0 1.7e-29 102.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228169|ref|NP_634091.1| - 1e-11 45.3 1.1 0.0001 22.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|21228169|ref|NP_634091.1| - 1.6e-07 30.7 0.0 0.00036 19.7 0.0 2.0 1 1 1 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|21228169|ref|NP_634091.1| - 2.4e-05 23.7 0.0 6e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21228169|ref|NP_634091.1| - 3.5e-05 23.8 0.1 5.7e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.1 gi|21228169|ref|NP_634091.1| - 7.2e-05 23.1 0.1 7.9e-05 23.0 0.0 1.3 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21228169|ref|NP_634091.1| - 0.00025 20.2 0.0 0.00039 19.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 ABC_ATPase PF09818.4 gi|21228169|ref|NP_634091.1| - 0.00025 19.7 0.4 0.19 10.3 0.0 3.1 2 2 0 2 2 2 1 Predicted ATPase of the ABC class SMC_N PF02463.14 gi|21228169|ref|NP_634091.1| - 0.0003 20.0 0.2 0.38 9.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|21228169|ref|NP_634091.1| - 0.00047 20.3 1.0 0.0074 16.4 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21228169|ref|NP_634091.1| - 0.0017 18.5 0.2 0.021 15.0 0.1 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.1 gi|21228169|ref|NP_634091.1| - 0.0036 18.1 0.1 0.0053 17.5 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|21228169|ref|NP_634091.1| - 0.0048 16.8 0.1 0.057 13.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|21228169|ref|NP_634091.1| - 0.009 15.7 0.0 0.017 14.8 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Arch_ATPase PF01637.13 gi|21228169|ref|NP_634091.1| - 0.0099 15.5 0.1 0.013 15.2 0.0 1.5 1 1 0 1 1 1 1 Archaeal ATPase NB-ARC PF00931.17 gi|21228169|ref|NP_634091.1| - 0.01 14.7 0.1 0.07 11.9 0.0 2.1 2 1 0 2 2 2 0 NB-ARC domain SRP54 PF00448.17 gi|21228169|ref|NP_634091.1| - 0.011 15.2 0.2 0.025 14.0 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NACHT PF05729.7 gi|21228169|ref|NP_634091.1| - 0.011 15.4 0.2 0.027 14.1 0.0 1.6 2 0 0 2 2 2 0 NACHT domain UPF0079 PF02367.12 gi|21228169|ref|NP_634091.1| - 0.016 14.8 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_30 PF13604.1 gi|21228169|ref|NP_634091.1| - 0.017 14.7 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|21228169|ref|NP_634091.1| - 0.018 14.6 0.0 0.034 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|21228169|ref|NP_634091.1| - 0.019 14.3 0.0 0.042 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.1 gi|21228169|ref|NP_634091.1| - 0.021 13.3 0.1 3.5 5.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|21228169|ref|NP_634091.1| - 0.021 14.5 0.6 0.25 11.0 0.0 2.5 2 1 0 2 2 2 0 NTPase ArgK PF03308.11 gi|21228169|ref|NP_634091.1| - 0.025 13.3 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 ArgK protein AAA_33 PF13671.1 gi|21228169|ref|NP_634091.1| - 0.027 14.3 0.0 0.054 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|21228169|ref|NP_634091.1| - 0.03 14.0 0.1 0.074 12.8 0.1 1.6 1 0 0 1 1 1 0 Part of AAA domain AAA_18 PF13238.1 gi|21228169|ref|NP_634091.1| - 0.034 14.4 1.3 0.093 13.0 0.9 1.9 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|21228169|ref|NP_634091.1| - 0.035 13.8 0.3 1.5 8.4 0.1 2.7 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_10 PF12846.2 gi|21228169|ref|NP_634091.1| - 0.064 12.6 0.1 0.19 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA-like domain AAA_28 PF13521.1 gi|21228169|ref|NP_634091.1| - 0.071 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|21228169|ref|NP_634091.1| - 0.077 12.4 0.0 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein SbcCD_C PF13558.1 gi|21228169|ref|NP_634091.1| - 0.077 12.9 0.1 0.63 9.9 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Mg_chelatase PF01078.16 gi|21228169|ref|NP_634091.1| - 0.13 11.3 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI FecCD PF01032.13 gi|21228170|ref|NP_634092.1| - 1.1e-92 310.2 34.5 1.3e-92 309.9 23.9 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.12 gi|21228170|ref|NP_634092.1| - 2e-07 30.5 11.6 2e-07 30.5 8.1 1.8 1 1 0 1 1 1 1 ABC 3 transport family Peripla_BP_2 PF01497.13 gi|21228171|ref|NP_634093.1| - 3.8e-22 78.5 0.1 5.9e-22 77.9 0.1 1.2 1 0 0 1 1 1 1 Periplasmic binding protein DUF1995 PF09353.5 gi|21228171|ref|NP_634093.1| - 0.099 12.2 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) QRPTase_C PF01729.14 gi|21228172|ref|NP_634094.1| - 6.4e-60 201.5 1.4 7.8e-60 201.2 1.0 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|21228172|ref|NP_634094.1| - 5.9e-23 80.4 0.0 1.2e-22 79.5 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.12 gi|21228172|ref|NP_634094.1| - 0.0073 15.4 0.1 0.012 14.7 0.1 1.4 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI Biotin_lipoyl_2 PF13533.1 gi|21228172|ref|NP_634094.1| - 0.0079 15.8 0.1 0.015 14.9 0.1 1.4 1 0 0 1 1 1 1 Biotin-lipoyl like Ribul_P_3_epim PF00834.14 gi|21228172|ref|NP_634094.1| - 0.04 13.0 0.1 0.1 11.6 0.0 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family DUF1341 PF07071.6 gi|21228172|ref|NP_634094.1| - 0.09 12.2 0.3 0.17 11.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1341) Disaggr_repeat PF06848.6 gi|21228173|ref|NP_634095.1| - 9e-264 866.0 34.9 3.3e-96 319.9 2.6 3.8 3 0 0 3 3 3 3 Disaggregatase related repeat TGFb_propeptide PF00688.13 gi|21228173|ref|NP_634095.1| - 5.4e-12 45.5 0.0 0.66 9.2 0.0 6.1 5 1 1 6 6 6 5 TGF-beta propeptide Kelch_6 PF13964.1 gi|21228173|ref|NP_634095.1| - 0.32 11.2 3.9 15 5.9 0.0 4.7 4 0 0 4 4 4 0 Kelch motif DUF108 PF01958.13 gi|21228174|ref|NP_634096.1| - 1.1e-38 131.3 0.2 1.7e-38 130.7 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 gi|21228174|ref|NP_634096.1| - 9.5e-19 67.9 0.0 1.9e-18 66.9 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.19 gi|21228174|ref|NP_634096.1| - 0.019 15.2 0.1 0.041 14.1 0.0 1.6 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Peptidase_M42 PF05343.9 gi|21228174|ref|NP_634096.1| - 0.051 12.3 0.0 0.069 11.9 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase NadA PF02445.11 gi|21228175|ref|NP_634097.1| - 4.1e-122 406.6 3.3 4.6e-122 406.4 2.3 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein DUF1246 PF06849.7 gi|21228175|ref|NP_634097.1| - 0.041 13.6 0.1 0.44 10.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1246) DUF4448 PF14610.1 gi|21228176|ref|NP_634098.1| - 0.003 17.0 0.1 0.011 15.2 0.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF4448) UbiA PF01040.13 gi|21228177|ref|NP_634099.1| - 1.6e-40 138.9 23.6 2.3e-40 138.4 15.5 1.7 1 1 1 2 2 2 1 UbiA prenyltransferase family AdoMet_Synthase PF01941.14 gi|21228178|ref|NP_634100.1| - 3.6e-163 542.6 0.3 4.2e-163 542.4 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) UPF0278 PF08745.6 gi|21228179|ref|NP_634101.1| - 2.3e-93 311.1 0.0 2.7e-93 310.9 0.0 1.0 1 0 0 1 1 1 1 UPF0278 family zinc_ribbon_2 PF13240.1 gi|21228180|ref|NP_634102.1| - 0.0019 17.6 4.0 0.094 12.2 0.2 3.1 3 0 0 3 3 3 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|21228180|ref|NP_634102.1| - 0.0089 15.2 0.8 0.65 9.2 0.3 2.7 2 0 0 2 2 2 1 zinc-ribbon domain zf-RING_5 PF14634.1 gi|21228180|ref|NP_634102.1| - 0.35 10.6 7.9 3.2 7.5 0.7 3.2 3 0 0 3 3 3 0 zinc-RING finger domain zf-CHY PF05495.7 gi|21228180|ref|NP_634102.1| - 0.41 10.8 7.0 1.9 8.7 0.2 3.4 2 1 0 3 3 3 0 CHY zinc finger DZR PF12773.2 gi|21228180|ref|NP_634102.1| - 0.67 9.8 8.8 0.32 10.8 1.8 2.8 1 1 1 2 2 2 0 Double zinc ribbon LIM PF00412.17 gi|21228180|ref|NP_634102.1| - 1.5 8.9 6.0 5.2 7.2 0.0 3.5 3 1 0 3 3 3 0 LIM domain Nudix_N_2 PF14803.1 gi|21228180|ref|NP_634102.1| - 2.6 7.8 7.7 11 5.7 0.0 3.2 4 0 0 4 4 4 0 Nudix N-terminal PHD PF00628.24 gi|21228180|ref|NP_634102.1| - 3.7 7.2 7.1 22 4.8 0.3 3.2 3 0 0 3 3 3 0 PHD-finger zf-dskA_traR PF01258.12 gi|21228180|ref|NP_634102.1| - 6.7 6.5 12.2 15 5.3 0.1 4.1 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger Thioredoxin PF00085.15 gi|21228181|ref|NP_634103.1| - 1.1e-21 76.4 0.0 1.3e-21 76.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|21228181|ref|NP_634103.1| - 3.6e-11 43.2 0.3 6.9e-10 39.1 0.2 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.1 gi|21228181|ref|NP_634103.1| - 1.1e-06 28.3 0.0 1.7e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.5 gi|21228181|ref|NP_634103.1| - 3.4e-05 23.4 0.1 4.3e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.16 gi|21228181|ref|NP_634103.1| - 4.2e-05 23.2 0.1 6.8e-05 22.5 0.1 1.3 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_7 PF13899.1 gi|21228181|ref|NP_634103.1| - 7.1e-05 22.7 0.0 0.00011 22.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like DSBA PF01323.15 gi|21228181|ref|NP_634103.1| - 7.2e-05 22.4 0.9 0.014 14.9 0.1 2.1 1 1 1 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.1 gi|21228181|ref|NP_634103.1| - 0.00053 20.0 1.3 0.032 14.2 0.4 2.3 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.1 gi|21228181|ref|NP_634103.1| - 0.0017 18.4 0.0 0.011 15.8 0.0 2.0 1 1 1 2 2 2 1 Thioredoxin-like Glutaredoxin PF00462.19 gi|21228181|ref|NP_634103.1| - 0.0027 17.6 0.0 0.0041 17.0 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin TraF PF13728.1 gi|21228181|ref|NP_634103.1| - 0.0069 15.8 0.1 0.0085 15.5 0.0 1.3 1 1 0 1 1 1 1 F plasmid transfer operon protein DUF836 PF05768.9 gi|21228181|ref|NP_634103.1| - 0.073 13.3 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_5 PF13743.1 gi|21228181|ref|NP_634103.1| - 0.1 12.1 0.1 0.72 9.4 0.1 1.9 1 1 1 2 2 2 0 Thioredoxin UPF0014 PF03649.8 gi|21228182|ref|NP_634104.1| - 6.6e-43 146.6 11.1 8.3e-43 146.3 7.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) Spore_III_AE PF09546.5 gi|21228182|ref|NP_634104.1| - 0.019 13.9 10.0 0.032 13.2 6.9 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AE (spore_III_AE) ABC_tran PF00005.22 gi|21228183|ref|NP_634105.1| - 5.6e-29 101.1 0.0 8e-29 100.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228183|ref|NP_634105.1| - 1e-09 38.8 0.1 2e-05 24.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228183|ref|NP_634105.1| - 3.7e-06 26.3 0.9 1.4e-05 24.4 0.6 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|21228183|ref|NP_634105.1| - 6.7e-05 22.1 0.0 0.00011 21.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|21228183|ref|NP_634105.1| - 0.0012 18.2 0.2 0.0025 17.2 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|21228183|ref|NP_634105.1| - 0.0027 17.5 0.2 0.15 12.0 0.1 2.5 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF815 PF05673.8 gi|21228183|ref|NP_634105.1| - 0.014 14.3 0.1 0.028 13.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_5 PF07728.9 gi|21228183|ref|NP_634105.1| - 0.021 14.5 0.5 0.55 9.9 0.1 2.7 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21228183|ref|NP_634105.1| - 0.026 15.3 0.7 0.061 14.1 0.5 1.8 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.4 gi|21228183|ref|NP_634105.1| - 0.027 13.0 0.1 0.12 10.9 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_18 PF13238.1 gi|21228183|ref|NP_634105.1| - 0.045 14.0 0.8 0.16 12.3 0.5 2.0 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|21228183|ref|NP_634105.1| - 0.051 13.4 0.0 0.078 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.18 gi|21228183|ref|NP_634105.1| - 0.056 13.2 0.1 0.11 12.2 0.1 1.6 1 1 0 1 1 1 0 Dynamin family Sigma54_activat PF00158.21 gi|21228183|ref|NP_634105.1| - 0.078 12.4 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain MCM PF00493.18 gi|21228183|ref|NP_634105.1| - 0.081 11.7 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 MCM2/3/5 family Miro PF08477.8 gi|21228183|ref|NP_634105.1| - 0.096 13.1 1.3 0.12 12.9 0.4 1.7 2 1 0 2 2 1 0 Miro-like protein RNA_helicase PF00910.17 gi|21228183|ref|NP_634105.1| - 0.12 12.5 0.1 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA PF00004.24 gi|21228183|ref|NP_634105.1| - 0.17 12.0 0.6 0.66 10.1 0.2 2.0 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) DS PF01916.12 gi|21228184|ref|NP_634106.1| - 1.7e-84 283.4 0.0 2e-84 283.2 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase OMPdecase PF00215.19 gi|21228185|ref|NP_634107.1| - 4.2e-44 150.6 0.7 5.3e-44 150.2 0.5 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.12 gi|21228185|ref|NP_634107.1| - 7e-08 31.9 2.2 0.00035 19.9 0.2 2.9 2 1 1 3 3 3 2 PcrB family PEP_mutase PF13714.1 gi|21228185|ref|NP_634107.1| - 0.0018 17.5 1.0 0.13 11.4 0.7 2.5 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Ribul_P_3_epim PF00834.14 gi|21228185|ref|NP_634107.1| - 0.005 15.9 0.1 0.016 14.3 0.1 1.7 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family NanE PF04131.9 gi|21228185|ref|NP_634107.1| - 0.019 13.9 3.1 3.2 6.6 0.0 3.2 2 2 2 4 4 4 0 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.13 gi|21228185|ref|NP_634107.1| - 0.081 11.7 0.8 0.18 10.5 0.6 1.6 1 1 0 1 1 1 0 FMN-dependent dehydrogenase CdhD PF03599.11 gi|21228186|ref|NP_634108.1| - 1.3e-158 527.5 0.3 1.5e-158 527.3 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|21228186|ref|NP_634108.1| - 5.2e-16 57.9 1.5 5.2e-16 57.9 1.1 2.1 2 0 0 2 2 2 1 Putative Fe-S cluster Peripla_BP_6 PF13458.1 gi|21228186|ref|NP_634108.1| - 0.00015 21.2 0.1 0.0061 15.9 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein Pterin_bind PF00809.17 gi|21228186|ref|NP_634108.1| - 0.00055 19.3 0.0 0.0034 16.7 0.0 2.0 1 1 0 1 1 1 1 Pterin binding enzyme DUF2007 PF09413.5 gi|21228186|ref|NP_634108.1| - 0.017 14.9 0.0 0.058 13.2 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF2007) MOFRL PF05161.8 gi|21228186|ref|NP_634108.1| - 0.037 14.1 0.1 0.072 13.2 0.1 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.11 gi|21228187|ref|NP_634109.1| - 1.3e-92 310.3 2.1 5e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit Pterin_bind PF00809.17 gi|21228187|ref|NP_634109.1| - 0.086 12.1 0.3 0.94 8.7 0.2 2.3 1 1 0 1 1 1 0 Pterin binding enzyme CbiA PF01656.18 gi|21228188|ref|NP_634110.1| - 7.5e-32 110.3 0.3 9.5e-32 109.9 0.2 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|21228188|ref|NP_634110.1| - 7.4e-09 35.1 2.0 5.4e-08 32.3 1.4 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|21228188|ref|NP_634110.1| - 5.6e-07 28.8 2.2 1.1e-05 24.6 1.6 2.3 1 1 1 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|21228188|ref|NP_634110.1| - 1.4e-05 25.1 0.3 0.056 13.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.10 gi|21228188|ref|NP_634110.1| - 2.8e-05 23.8 0.4 0.14 11.8 0.1 2.2 2 0 0 2 2 2 2 NTPase YhjQ PF06564.7 gi|21228188|ref|NP_634110.1| - 0.00026 20.4 0.1 0.12 11.7 0.0 2.3 2 1 0 2 2 2 1 YhjQ protein Toprim PF01751.17 gi|21228188|ref|NP_634110.1| - 0.00028 20.7 0.1 0.38 10.7 0.0 2.4 2 0 0 2 2 2 2 Toprim domain MipZ PF09140.6 gi|21228188|ref|NP_634110.1| - 0.00042 19.4 0.8 0.0097 15.0 0.1 2.2 1 1 1 2 2 2 1 ATPase MipZ AAA_26 PF13500.1 gi|21228188|ref|NP_634110.1| - 0.00078 19.1 2.7 0.14 11.7 0.1 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|21228188|ref|NP_634110.1| - 0.0021 18.0 0.1 0.0039 17.1 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|21228188|ref|NP_634110.1| - 0.0028 18.4 3.8 0.11 13.2 2.4 2.5 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.12 gi|21228188|ref|NP_634110.1| - 0.003 17.4 4.0 0.0065 16.3 0.5 2.3 2 1 0 2 2 2 1 Domain of unknown function DUF87 AAA_19 PF13245.1 gi|21228188|ref|NP_634110.1| - 0.0037 16.9 0.3 0.0099 15.6 0.2 1.8 1 0 0 1 1 1 1 Part of AAA domain MobB PF03205.9 gi|21228188|ref|NP_634110.1| - 0.0046 16.6 0.0 0.011 15.4 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B APS_kinase PF01583.15 gi|21228188|ref|NP_634110.1| - 0.0056 16.3 0.1 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_22 PF13401.1 gi|21228188|ref|NP_634110.1| - 0.0061 16.7 0.8 0.088 12.9 0.4 2.3 1 1 0 1 1 1 1 AAA domain DUF2365 PF10157.4 gi|21228188|ref|NP_634110.1| - 0.0086 15.9 0.2 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2365) AAA_18 PF13238.1 gi|21228188|ref|NP_634110.1| - 0.009 16.3 0.2 0.022 15.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain Toprim_4 PF13662.1 gi|21228188|ref|NP_634110.1| - 0.013 15.4 0.3 0.17 11.8 0.0 2.2 2 0 0 2 2 2 0 Toprim domain DUF2075 PF09848.4 gi|21228188|ref|NP_634110.1| - 0.018 14.0 0.0 0.021 13.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) PRK PF00485.13 gi|21228188|ref|NP_634110.1| - 0.022 14.3 0.2 0.15 11.5 0.0 2.0 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family ABC_tran PF00005.22 gi|21228188|ref|NP_634110.1| - 0.03 14.6 0.1 0.065 13.5 0.1 1.6 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.1 gi|21228188|ref|NP_634110.1| - 0.031 13.8 0.3 0.088 12.3 0.2 1.9 1 1 0 1 1 1 0 AAA domain KaiC PF06745.8 gi|21228188|ref|NP_634110.1| - 0.033 13.2 0.3 0.32 10.0 0.0 2.2 2 1 0 2 2 2 0 KaiC AAA_10 PF12846.2 gi|21228188|ref|NP_634110.1| - 0.039 13.3 0.3 0.059 12.8 0.2 1.7 1 1 0 1 1 1 0 AAA-like domain NB-ARC PF00931.17 gi|21228188|ref|NP_634110.1| - 0.041 12.7 0.0 0.059 12.2 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain SRP54 PF00448.17 gi|21228188|ref|NP_634110.1| - 0.045 13.2 3.0 0.29 10.5 0.6 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF853 PF05872.7 gi|21228188|ref|NP_634110.1| - 0.052 11.9 0.1 0.077 11.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Helicase_RecD PF05127.9 gi|21228188|ref|NP_634110.1| - 0.054 13.1 0.1 0.091 12.3 0.1 1.6 1 1 0 1 1 1 0 Helicase PIF1 PF05970.9 gi|21228188|ref|NP_634110.1| - 0.07 12.0 0.1 0.12 11.3 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase KAP_NTPase PF07693.9 gi|21228188|ref|NP_634110.1| - 0.081 11.9 0.0 0.086 11.8 0.0 1.3 1 1 0 1 1 1 0 KAP family P-loop domain ArgK PF03308.11 gi|21228188|ref|NP_634110.1| - 0.092 11.5 1.8 0.25 10.0 0.1 2.0 2 0 0 2 2 2 0 ArgK protein RecA PF00154.16 gi|21228188|ref|NP_634110.1| - 0.096 11.7 0.2 1.3 7.9 0.0 2.2 2 0 0 2 2 2 0 recA bacterial DNA recombination protein Zeta_toxin PF06414.7 gi|21228188|ref|NP_634110.1| - 0.098 11.7 0.1 0.2 10.7 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin Resolvase PF00239.16 gi|21228188|ref|NP_634110.1| - 0.11 12.3 0.2 0.18 11.6 0.2 1.4 1 0 0 1 1 1 0 Resolvase, N terminal domain NACHT PF05729.7 gi|21228188|ref|NP_634110.1| - 0.12 12.0 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain VirC1 PF07015.6 gi|21228188|ref|NP_634110.1| - 0.12 11.4 0.7 2.7 7.0 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein Sigma54_activat PF00158.21 gi|21228188|ref|NP_634110.1| - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain TIP49 PF06068.8 gi|21228188|ref|NP_634110.1| - 0.12 11.0 2.2 0.088 11.5 0.2 1.7 2 1 0 2 2 2 0 TIP49 C-terminus RNA_helicase PF00910.17 gi|21228188|ref|NP_634110.1| - 0.13 12.4 0.0 0.9 9.7 0.0 2.3 3 0 0 3 3 2 0 RNA helicase TrwB_AAD_bind PF10412.4 gi|21228188|ref|NP_634110.1| - 0.15 10.6 0.5 0.29 9.7 0.3 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.1 gi|21228188|ref|NP_634110.1| - 0.23 10.8 5.0 0.21 10.9 0.7 2.7 1 1 2 3 3 3 0 AAA domain CdhC PF03598.10 gi|21228189|ref|NP_634111.1| - 5.8e-186 617.9 0.4 7.1e-186 617.6 0.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CO_dh PF02552.11 gi|21228190|ref|NP_634112.1| - 4.7e-30 104.3 0.0 5.4e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.17 gi|21228190|ref|NP_634112.1| - 3.4e-09 36.5 0.0 4.2e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.15 gi|21228191|ref|NP_634113.1| - 6.2e-114 381.1 1.2 3.4e-94 316.0 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_8 PF13183.1 gi|21228191|ref|NP_634113.1| - 7.1e-08 32.3 6.3 7.1e-08 32.3 4.4 2.5 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21228191|ref|NP_634113.1| - 1.2e-06 28.8 8.1 0.0042 17.4 0.3 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21228191|ref|NP_634113.1| - 6.1e-06 26.0 6.0 6.1e-06 26.0 4.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21228191|ref|NP_634113.1| - 1.3e-05 25.4 7.8 1.3e-05 25.4 5.4 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228191|ref|NP_634113.1| - 0.00053 20.2 11.9 0.00053 20.2 8.2 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228191|ref|NP_634113.1| - 0.0014 18.4 19.9 0.0036 17.0 9.7 3.4 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228191|ref|NP_634113.1| - 0.002 17.9 21.5 0.008 16.0 1.2 3.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.22 gi|21228191|ref|NP_634113.1| - 0.0023 17.4 24.1 0.015 14.9 2.0 3.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21228191|ref|NP_634113.1| - 0.0028 17.9 0.2 0.0028 17.9 0.1 3.6 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21228191|ref|NP_634113.1| - 0.0076 16.5 25.2 0.039 14.2 0.7 4.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21228191|ref|NP_634113.1| - 0.016 15.0 3.5 0.016 15.0 2.4 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Ribosomal_S2 PF00318.15 gi|21228191|ref|NP_634113.1| - 0.038 13.1 0.0 0.072 12.2 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S2 Fer4_16 PF13484.1 gi|21228191|ref|NP_634113.1| - 0.053 14.2 10.9 0.35 11.6 0.0 3.4 4 0 0 4 4 3 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.1 gi|21228191|ref|NP_634113.1| - 0.057 13.0 6.6 1.1 8.9 4.2 2.7 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_13 PF13370.1 gi|21228191|ref|NP_634113.1| - 1.7 9.1 11.6 1.8 9.0 1.4 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF134 PF02001.11 gi|21228192|ref|NP_634114.1| - 2.7e-23 81.8 0.0 3.8e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 Sigma70_r4_2 PF08281.7 gi|21228192|ref|NP_634114.1| - 6.7e-07 28.6 0.0 1.1e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Zn-ribbon_8 PF09723.5 gi|21228192|ref|NP_634114.1| - 0.00084 19.2 0.3 0.00084 19.2 0.2 1.9 2 0 0 2 2 2 1 Zinc ribbon domain HTH_10 PF04967.7 gi|21228192|ref|NP_634114.1| - 0.0029 17.1 0.0 0.0046 16.4 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain HypA PF01155.14 gi|21228192|ref|NP_634114.1| - 0.006 16.2 4.6 0.0078 15.8 0.2 2.5 2 1 1 3 3 3 1 Hydrogenase expression/synthesis hypA family ADK_lid PF05191.9 gi|21228192|ref|NP_634114.1| - 0.013 15.1 0.2 0.029 14.0 0.1 1.6 1 0 0 1 1 1 0 Adenylate kinase, active site lid DUF4379 PF14311.1 gi|21228192|ref|NP_634114.1| - 0.039 13.7 4.8 0.1 12.4 3.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4379) Sigma70_r4 PF04545.11 gi|21228192|ref|NP_634114.1| - 0.083 12.2 0.1 0.17 11.1 0.1 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 Sigma70_ECF PF07638.6 gi|21228192|ref|NP_634114.1| - 0.1 12.2 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 ECF sigma factor HTH_1 PF00126.22 gi|21228192|ref|NP_634114.1| - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family TF_Zn_Ribbon PF08271.7 gi|21228192|ref|NP_634114.1| - 0.13 11.5 2.5 2.7 7.3 0.9 2.5 2 1 0 2 2 2 0 TFIIB zinc-binding zinc_ribbon_5 PF13719.1 gi|21228192|ref|NP_634114.1| - 0.68 9.5 4.0 8.3 6.0 0.2 2.6 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|21228192|ref|NP_634114.1| - 0.82 9.4 5.4 9 6.0 0.2 2.6 1 1 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1595 PF12760.2 gi|21228192|ref|NP_634114.1| - 1.8 8.4 7.0 1.2 9.0 0.7 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C3HC4_2 PF13923.1 gi|21228192|ref|NP_634114.1| - 2.1 8.4 7.7 0.42 10.6 2.4 2.1 2 0 0 2 2 1 0 Zinc finger, C3HC4 type (RING finger) TFIIS_C PF01096.13 gi|21228192|ref|NP_634114.1| - 3.7 7.2 8.0 14 5.4 1.2 3.2 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-HYPF PF07503.7 gi|21228192|ref|NP_634114.1| - 5.5 6.4 8.0 0.26 10.7 0.3 2.6 3 0 0 3 3 3 0 HypF finger MS_channel PF00924.13 gi|21228193|ref|NP_634115.1| - 8.8e-26 90.5 2.7 1.3e-25 89.9 1.8 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2730 PF10805.3 gi|21228193|ref|NP_634115.1| - 0.0037 16.9 0.4 0.014 15.0 0.2 2.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) DUF2935 PF11155.3 gi|21228193|ref|NP_634115.1| - 0.21 11.6 1.8 0.99 9.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) DUF3373 PF11853.3 gi|21228193|ref|NP_634115.1| - 0.37 9.2 2.3 0.54 8.7 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Syntaxin PF00804.20 gi|21228193|ref|NP_634115.1| - 0.97 9.6 6.3 1.6 8.9 3.8 1.8 2 0 0 2 2 2 0 Syntaxin Fmp27_WPPW PF10359.4 gi|21228193|ref|NP_634115.1| - 2.4 6.4 6.2 3.8 5.8 4.3 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF972 PF06156.8 gi|21228193|ref|NP_634115.1| - 8.3 6.8 7.7 20 5.5 4.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF972) CbiA PF01656.18 gi|21228194|ref|NP_634116.1| - 4.3e-19 68.6 0.0 6.1e-19 68.1 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|21228194|ref|NP_634116.1| - 6.4e-09 35.9 0.0 6.4e-08 32.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|21228194|ref|NP_634116.1| - 1.2e-06 29.3 0.6 4.6e-06 27.4 0.4 2.2 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.12 gi|21228194|ref|NP_634116.1| - 1.4e-05 24.9 0.2 3.3e-05 23.8 0.1 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF87 ArsA_ATPase PF02374.10 gi|21228194|ref|NP_634116.1| - 4e-05 22.8 0.2 0.00011 21.3 0.1 1.6 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_NifH PF00142.13 gi|21228194|ref|NP_634116.1| - 0.00021 20.6 1.6 0.0016 17.6 0.1 2.4 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_18 PF13238.1 gi|21228194|ref|NP_634116.1| - 0.00074 19.8 0.3 0.0028 17.9 0.2 2.0 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|21228194|ref|NP_634116.1| - 0.00093 18.6 0.2 0.0084 15.5 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain APS_kinase PF01583.15 gi|21228194|ref|NP_634116.1| - 0.001 18.7 0.0 0.0018 17.9 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase Miro PF08477.8 gi|21228194|ref|NP_634116.1| - 0.0015 19.0 0.3 0.0042 17.5 0.1 1.8 2 0 0 2 2 2 1 Miro-like protein Zeta_toxin PF06414.7 gi|21228194|ref|NP_634116.1| - 0.0015 17.6 0.0 0.0028 16.7 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin TrkA_N PF02254.13 gi|21228194|ref|NP_634116.1| - 0.0042 17.0 0.0 0.47 10.4 0.0 2.3 2 0 0 2 2 2 1 TrkA-N domain AAA_25 PF13481.1 gi|21228194|ref|NP_634116.1| - 0.0045 16.4 0.1 0.016 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain KAP_NTPase PF07693.9 gi|21228194|ref|NP_634116.1| - 0.0055 15.7 0.0 0.0055 15.7 0.0 1.2 1 0 0 1 1 1 1 KAP family P-loop domain ABC_tran PF00005.22 gi|21228194|ref|NP_634116.1| - 0.0069 16.6 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter MipZ PF09140.6 gi|21228194|ref|NP_634116.1| - 0.011 14.8 0.1 0.041 12.9 0.0 1.8 2 0 0 2 2 2 0 ATPase MipZ MobB PF03205.9 gi|21228194|ref|NP_634116.1| - 0.017 14.8 0.1 0.041 13.6 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.17 gi|21228194|ref|NP_634116.1| - 0.022 13.6 0.2 0.039 12.8 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.1 gi|21228194|ref|NP_634116.1| - 0.023 14.2 0.4 0.084 12.4 0.0 1.9 1 1 1 2 2 2 0 AAA domain KTI12 PF08433.5 gi|21228194|ref|NP_634116.1| - 0.027 13.6 0.4 0.07 12.3 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_26 PF13500.1 gi|21228194|ref|NP_634116.1| - 0.031 13.8 0.3 6.5 6.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|21228194|ref|NP_634116.1| - 0.034 13.0 0.0 0.055 12.3 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ArgK PF03308.11 gi|21228194|ref|NP_634116.1| - 0.038 12.7 0.0 0.064 12.0 0.0 1.3 1 0 0 1 1 1 0 ArgK protein AAA_14 PF13173.1 gi|21228194|ref|NP_634116.1| - 0.051 13.4 0.2 0.13 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|21228194|ref|NP_634116.1| - 0.054 13.6 0.0 0.14 12.3 0.1 1.7 2 0 0 2 2 1 0 RNA helicase AAA_33 PF13671.1 gi|21228194|ref|NP_634116.1| - 0.077 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|21228194|ref|NP_634116.1| - 0.083 12.3 0.1 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA-like domain MMR_HSR1 PF01926.18 gi|21228194|ref|NP_634116.1| - 0.09 12.7 1.7 0.78 9.7 1.2 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase PRK PF00485.13 gi|21228194|ref|NP_634116.1| - 0.096 12.2 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.1 gi|21228194|ref|NP_634116.1| - 0.11 12.4 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.13 gi|21228194|ref|NP_634116.1| - 0.12 11.8 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family ATP-synt_ab PF00006.20 gi|21228194|ref|NP_634116.1| - 0.14 11.6 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TPP_enzyme_C PF02775.16 gi|21228195|ref|NP_634117.1| - 4.7e-28 97.6 0.3 7.8e-28 96.9 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|21228195|ref|NP_634117.1| - 2.4e-12 46.8 0.1 1.6e-11 44.2 0.1 2.1 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|21228195|ref|NP_634117.1| - 1.8e-08 33.5 14.7 2.7e-05 23.5 1.6 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain TPP_enzyme_N PF02776.13 gi|21228195|ref|NP_634117.1| - 3.7e-05 23.2 0.1 0.00011 21.6 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_21 PF14697.1 gi|21228195|ref|NP_634117.1| - 0.00021 21.0 13.0 0.00062 19.5 9.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228195|ref|NP_634117.1| - 0.00038 20.1 14.6 0.00082 19.1 10.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21228195|ref|NP_634117.1| - 0.00084 19.6 14.8 0.00084 19.6 10.2 2.2 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228195|ref|NP_634117.1| - 0.0029 17.4 3.5 0.0029 17.4 2.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21228195|ref|NP_634117.1| - 0.052 13.4 20.5 0.24 11.3 3.7 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21228195|ref|NP_634117.1| - 0.07 13.4 18.4 0.17 12.3 1.8 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain DXP_synthase_N PF13292.1 gi|21228195|ref|NP_634117.1| - 0.072 12.0 0.1 10 4.9 0.0 2.2 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase Fer4_9 PF13187.1 gi|21228195|ref|NP_634117.1| - 2.2 8.6 19.9 0.1 12.8 9.7 2.0 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21228195|ref|NP_634117.1| - 2.8 8.5 18.8 0.22 12.1 2.4 3.1 2 1 1 3 3 2 0 4Fe-4S single cluster domain POR PF01558.13 gi|21228196|ref|NP_634118.1| - 2.3e-39 135.0 0.5 2.7e-39 134.8 0.4 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Lipoprotein_9 PF03180.9 gi|21228196|ref|NP_634118.1| - 0.084 11.7 0.1 1 8.2 0.0 2.3 2 1 1 3 3 3 0 NLPA lipoprotein VanZ PF04892.7 gi|21228197|ref|NP_634119.1| - 3.8e-10 39.8 6.3 6.6e-10 39.0 4.4 1.3 1 1 0 1 1 1 1 VanZ like family HupE_UreJ_2 PF13795.1 gi|21228197|ref|NP_634119.1| - 0.099 12.1 3.0 0.19 11.1 2.1 1.5 1 1 0 1 1 1 0 HupE / UreJ protein DUF2407_C PF13373.1 gi|21228197|ref|NP_634119.1| - 0.2 11.5 0.7 6.6 6.6 0.0 2.2 2 0 0 2 2 2 0 DUF2407 C-terminal domain DUF4386 PF14329.1 gi|21228197|ref|NP_634119.1| - 2.4 7.5 8.9 2.7 7.4 3.3 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4386) Glycos_transf_4 PF00953.16 gi|21228198|ref|NP_634120.1| - 7.4e-28 97.3 16.1 7.4e-28 97.3 11.1 2.1 3 0 0 3 3 3 1 Glycosyl transferase family 4 Cohesin PF00963.13 gi|21228199|ref|NP_634121.1| - 3e-21 75.7 3.6 3.8e-21 75.4 2.5 1.1 1 0 0 1 1 1 1 Cohesin domain Chordopox_A33R PF05966.7 gi|21228199|ref|NP_634121.1| - 0.033 12.9 0.1 0.04 12.6 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein Dockerin_1 PF00404.13 gi|21228200|ref|NP_634122.1| - 1.5e-08 33.9 8.2 0.00032 20.2 0.4 3.6 3 0 0 3 3 3 2 Dockerin type I repeat He_PIG PF05345.7 gi|21228200|ref|NP_634122.1| - 1.7e-07 31.1 0.5 1.7e-07 31.1 0.4 4.1 6 1 0 6 6 6 1 Putative Ig domain EF-hand_7 PF13499.1 gi|21228200|ref|NP_634122.1| - 0.0023 18.0 0.1 0.45 10.6 0.0 3.4 3 0 0 3 3 3 1 EF-hand domain pair PDZ_1 PF12812.2 gi|21228200|ref|NP_634122.1| - 0.024 14.5 0.3 4.3 7.3 0.0 3.0 3 0 0 3 3 3 0 PDZ-like domain EF-hand_6 PF13405.1 gi|21228200|ref|NP_634122.1| - 0.047 13.5 0.7 7.1 6.7 0.0 3.2 3 0 0 3 3 3 0 EF-hand domain EF-hand_1 PF00036.27 gi|21228200|ref|NP_634122.1| - 0.41 10.0 3.5 3.1 7.3 0.0 3.1 3 0 0 3 3 3 0 EF hand EF-hand_5 PF13202.1 gi|21228200|ref|NP_634122.1| - 4.1 6.9 6.3 3.5 7.1 0.0 2.9 3 0 0 3 3 3 0 EF hand Acyl_transf_3 PF01757.17 gi|21228201|ref|NP_634123.1| - 7e-26 90.8 43.2 9.2e-26 90.4 29.9 1.1 1 0 0 1 1 1 1 Acyltransferase family RseC_MucC PF04246.7 gi|21228201|ref|NP_634123.1| - 0.94 9.0 9.4 5 6.6 0.6 3.4 3 1 1 4 4 4 0 Positive regulator of sigma(E), RseC/MucC DUF805 PF05656.9 gi|21228201|ref|NP_634123.1| - 4.8 7.0 11.3 13 5.6 4.4 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF805) PIG-L PF02585.12 gi|21228202|ref|NP_634124.1| - 1.1e-09 38.8 0.0 1.8e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Polysacc_synt PF01943.12 gi|21228203|ref|NP_634125.1| - 8.4e-42 143.3 37.9 8.4e-42 143.3 26.3 2.8 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21228203|ref|NP_634125.1| - 5.7e-24 84.9 25.6 5.7e-24 84.9 17.8 2.8 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|21228203|ref|NP_634125.1| - 5.2e-18 65.2 54.7 7.9e-18 64.6 12.7 3.6 3 0 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain Glycos_transf_2 PF00535.21 gi|21228204|ref|NP_634126.1| - 4.6e-31 107.7 0.6 7e-31 107.1 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|21228204|ref|NP_634126.1| - 1.8e-16 60.0 1.7 2.2e-15 56.5 1.2 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.1 gi|21228204|ref|NP_634126.1| - 2.7e-15 56.8 0.0 8.9e-15 55.1 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 GNT-I PF03071.10 gi|21228204|ref|NP_634126.1| - 0.0071 14.9 0.1 0.0096 14.5 0.1 1.1 1 0 0 1 1 1 1 GNT-I family Glyco_trans_2_3 PF13632.1 gi|21228204|ref|NP_634126.1| - 0.015 15.0 0.2 0.034 13.8 0.1 1.6 1 1 0 1 1 1 0 Glycosyl transferase family group 2 Glyco_tranf_2_5 PF13712.1 gi|21228204|ref|NP_634126.1| - 0.017 14.3 0.1 0.028 13.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family Methyltransf_23 PF13489.1 gi|21228205|ref|NP_634127.1| - 1.4e-08 34.6 0.0 2e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21228205|ref|NP_634127.1| - 2.1e-08 34.5 0.0 3.6e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228205|ref|NP_634127.1| - 6.3e-06 26.5 0.0 1.2e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228205|ref|NP_634127.1| - 1e-05 25.1 0.0 1.5e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21228205|ref|NP_634127.1| - 0.00039 19.8 0.1 0.0022 17.4 0.1 2.1 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.13 gi|21228205|ref|NP_634127.1| - 0.0036 16.4 0.0 0.0043 16.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|21228205|ref|NP_634127.1| - 0.056 14.0 0.0 0.085 13.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|21228205|ref|NP_634127.1| - 0.13 11.6 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Acyl_transf_3 PF01757.17 gi|21228206|ref|NP_634128.1| - 4.7e-18 65.1 41.5 4.7e-18 65.1 28.8 1.4 2 0 0 2 2 2 1 Acyltransferase family Glycos_transf_1 PF00534.15 gi|21228207|ref|NP_634129.1| - 1.8e-29 102.3 0.2 2.9e-29 101.6 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21228207|ref|NP_634129.1| - 3.1e-13 49.8 0.0 4.3e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|21228207|ref|NP_634129.1| - 5e-13 49.3 0.0 8.8e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21228207|ref|NP_634129.1| - 3.5e-07 30.1 5.9 3.5e-07 30.1 4.1 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.1 gi|21228207|ref|NP_634129.1| - 1.2e-05 25.4 0.0 1.7e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.15 gi|21228208|ref|NP_634130.1| - 3.2e-46 156.8 0.4 6.8e-46 155.8 0.3 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21228208|ref|NP_634130.1| - 9.3e-20 71.1 0.0 1.8e-19 70.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21228208|ref|NP_634130.1| - 7.1e-05 23.0 0.0 0.00015 21.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 gi|21228208|ref|NP_634130.1| - 0.00013 20.8 0.0 0.00095 18.0 0.0 2.1 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_trans_4_2 PF13477.1 gi|21228208|ref|NP_634130.1| - 0.0012 18.7 0.4 0.0034 17.2 0.3 1.9 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|21228208|ref|NP_634130.1| - 0.047 13.4 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycogen_syn PF05693.8 gi|21228208|ref|NP_634130.1| - 0.062 11.5 0.3 0.12 10.6 0.0 1.5 2 0 0 2 2 2 0 Glycogen synthase Adenine_glyco PF03352.8 gi|21228208|ref|NP_634130.1| - 0.069 12.6 0.4 0.18 11.2 0.1 1.8 2 0 0 2 2 2 0 Methyladenine glycosylase PAH PF02671.16 gi|21228208|ref|NP_634130.1| - 0.26 10.9 1.7 0.58 9.8 0.1 2.5 4 0 0 4 4 4 0 Paired amphipathic helix repeat Glycos_transf_1 PF00534.15 gi|21228209|ref|NP_634131.1| - 3.7e-26 91.5 0.2 7.5e-26 90.5 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21228209|ref|NP_634131.1| - 3.1e-11 43.5 0.0 5.3e-11 42.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21228209|ref|NP_634131.1| - 0.021 14.5 0.0 0.037 13.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_2 PF00535.21 gi|21228211|ref|NP_634133.1| - 1.7e-17 63.6 0.6 2.1e-16 60.0 0.4 2.2 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21228211|ref|NP_634133.1| - 9.2e-09 35.4 0.0 4.5e-07 29.9 0.0 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21228211|ref|NP_634133.1| - 0.04 14.2 0.0 0.072 13.4 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF212 PF02681.9 gi|21228211|ref|NP_634133.1| - 0.068 12.9 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Divergent PAP2 family Glyco_tranf_2_2 PF10111.4 gi|21228211|ref|NP_634133.1| - 0.075 12.0 0.1 0.14 11.1 0.1 1.5 1 1 0 1 1 1 0 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21228211|ref|NP_634133.1| - 0.092 12.4 0.0 0.16 11.6 0.0 1.4 1 1 0 1 1 1 0 Glycosyl transferase family group 2 DUF354 PF04007.7 gi|21228212|ref|NP_634134.1| - 3.2e-32 111.7 0.3 4.3e-32 111.3 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.1 gi|21228212|ref|NP_634134.1| - 9.4e-05 22.2 0.2 0.00026 20.8 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_3 PF13528.1 gi|21228212|ref|NP_634134.1| - 0.00021 20.5 0.1 0.0023 17.1 0.0 2.2 2 1 0 2 2 2 1 Glycosyl transferase family 1 Glyco_transf_28 PF03033.15 gi|21228212|ref|NP_634134.1| - 0.0025 17.5 0.0 0.065 12.9 0.0 2.2 2 0 0 2 2 2 1 Glycosyltransferase family 28 N-terminal domain Epimerase_2 PF02350.14 gi|21228212|ref|NP_634134.1| - 0.0039 16.0 0.0 0.012 14.4 0.0 1.7 2 0 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase ArsC PF03960.10 gi|21228212|ref|NP_634134.1| - 0.0078 16.2 0.6 4.4 7.4 0.0 3.1 3 0 0 3 3 3 1 ArsC family Glyco_trans_1_2 PF13524.1 gi|21228212|ref|NP_634134.1| - 0.017 15.3 0.6 2.1 8.7 0.1 3.0 3 0 0 3 3 3 0 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21228212|ref|NP_634134.1| - 0.048 13.3 0.0 0.092 12.4 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glutaredoxin PF00462.19 gi|21228212|ref|NP_634134.1| - 0.11 12.4 0.0 42 4.2 0.0 3.4 4 0 0 4 4 4 0 Glutaredoxin AroM PF07302.6 gi|21228212|ref|NP_634134.1| - 0.13 11.5 0.1 0.28 10.4 0.1 1.5 1 0 0 1 1 1 0 AroM protein BRCA2 PF00634.13 gi|21228212|ref|NP_634134.1| - 0.14 11.4 1.0 0.39 10.0 0.7 1.7 1 0 0 1 1 1 0 BRCA2 repeat Hexapep PF00132.19 gi|21228213|ref|NP_634135.1| - 4.3e-17 60.7 4.0 1.9e-10 39.7 0.4 4.2 4 0 0 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21228213|ref|NP_634135.1| - 1.3e-10 40.6 4.4 9.9e-09 34.6 0.3 2.8 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase FemAB PF02388.11 gi|21228214|ref|NP_634136.1| - 2.1e-15 56.3 1.0 1.7e-09 36.8 0.0 3.1 1 1 1 2 2 2 2 FemAB family Acetyltransf_6 PF13480.1 gi|21228214|ref|NP_634136.1| - 8.1e-10 38.8 0.0 1.6e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Polysacc_deac_1 PF01522.16 gi|21228215|ref|NP_634137.1| - 0.046 13.3 0.1 0.085 12.4 0.1 1.5 1 0 0 1 1 1 0 Polysaccharide deacetylase Prefoldin PF02996.12 gi|21228215|ref|NP_634137.1| - 0.077 12.6 0.9 0.12 11.9 0.2 1.6 2 0 0 2 2 2 0 Prefoldin subunit Exosortase_EpsH PF09721.5 gi|21228216|ref|NP_634138.1| - 1.7e-17 63.5 20.9 2.4e-17 63.0 14.5 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Peptidase_M48 PF01435.13 gi|21228217|ref|NP_634139.1| - 9.6e-20 71.1 0.0 6.3e-19 68.4 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|21228217|ref|NP_634139.1| - 5.4e-06 25.5 0.1 1.7e-05 23.9 0.0 1.8 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF1616 PF07760.6 gi|21228219|ref|NP_634141.1| - 1.5e-62 211.3 1.1 3.4e-62 210.1 0.8 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1616) Big_3_4 PF13754.1 gi|21228219|ref|NP_634141.1| - 0.0001 22.5 6.6 0.035 14.4 0.1 4.2 3 1 0 3 3 3 2 Bacterial Ig-like domain (group 3) PKD PF00801.15 gi|21228220|ref|NP_634142.1| - 0.0032 17.1 0.4 0.0032 17.1 0.3 2.6 2 1 0 2 2 2 1 PKD domain SASRP1 PF15160.1 gi|21228220|ref|NP_634142.1| - 0.02 14.1 2.7 0.029 13.6 1.9 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 YjgP_YjgQ PF03739.9 gi|21228220|ref|NP_634142.1| - 0.098 11.3 0.2 0.21 10.2 0.1 1.5 1 1 1 2 2 2 0 Predicted permease YjgP/YjgQ family PASTA PF03793.14 gi|21228224|ref|NP_634146.1| - 2.9e-54 180.5 15.7 2e-14 52.9 0.4 4.3 4 0 0 4 4 4 4 PASTA domain potato_inhibit PF00280.13 gi|21228224|ref|NP_634146.1| - 0.11 12.6 0.1 64 3.7 0.0 3.9 3 0 0 3 3 3 0 Potato inhibitor I family Ribosomal_L3 PF00297.17 gi|21228226|ref|NP_634148.1| - 3.1e-71 239.8 0.3 3.6e-71 239.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.17 gi|21228227|ref|NP_634149.1| - 9.6e-48 162.1 0.2 1.1e-47 161.9 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.15 gi|21228228|ref|NP_634150.1| - 3.1e-13 49.4 2.0 4.5e-13 48.9 1.4 1.3 1 1 0 1 1 1 1 Ribosomal protein L23 ToxN_toxin PF13958.1 gi|21228228|ref|NP_634150.1| - 0.095 12.3 0.2 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system Ribosomal_L2_C PF03947.13 gi|21228229|ref|NP_634151.1| - 5.5e-38 129.6 0.4 7.9e-38 129.2 0.3 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|21228229|ref|NP_634151.1| - 2.6e-15 56.1 0.0 6.8e-15 54.7 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_S19 PF00203.16 gi|21228230|ref|NP_634152.1| - 8.6e-26 89.3 1.0 1.3e-25 88.8 0.7 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Citrate_synt PF00285.16 gi|21228230|ref|NP_634152.1| - 0.067 11.9 0.0 0.067 11.9 0.0 1.2 1 0 0 1 1 1 0 Citrate synthase Ribosomal_L22 PF00237.14 gi|21228231|ref|NP_634153.1| - 1.2e-35 121.6 0.2 1.3e-35 121.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Helicase_IV_N PF12462.3 gi|21228231|ref|NP_634153.1| - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal Ribosomal_S3_C PF00189.15 gi|21228232|ref|NP_634154.1| - 4.3e-17 62.1 0.1 7.4e-17 61.3 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|21228232|ref|NP_634154.1| - 1.2e-14 53.5 0.0 3.1e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 KH domain KH_1 PF00013.24 gi|21228232|ref|NP_634154.1| - 0.0021 17.6 2.0 0.015 14.9 0.1 2.7 3 0 0 3 3 3 1 KH domain KH_4 PF13083.1 gi|21228232|ref|NP_634154.1| - 0.027 14.0 0.0 0.085 12.5 0.0 1.8 1 0 0 1 1 1 0 KH domain KH_3 PF13014.1 gi|21228232|ref|NP_634154.1| - 0.076 12.6 0.1 0.65 9.7 0.0 2.3 2 0 0 2 2 2 0 KH domain DUF2360 PF10152.4 gi|21228232|ref|NP_634154.1| - 0.38 11.0 7.9 0.58 10.4 5.5 1.5 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein (DUF2360) Ribosomal_L29 PF00831.18 gi|21228233|ref|NP_634155.1| - 7.3e-19 67.2 0.3 8.2e-19 67.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein MerR-DNA-bind PF09278.6 gi|21228233|ref|NP_634155.1| - 0.12 12.8 1.8 5.3 7.5 0.0 2.2 2 0 0 2 2 2 0 MerR, DNA binding Med9 PF07544.8 gi|21228233|ref|NP_634155.1| - 0.24 11.1 2.7 0.83 9.4 0.3 2.0 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 UPF0086 PF01868.11 gi|21228234|ref|NP_634156.1| - 2.9e-30 103.7 0.1 3.4e-30 103.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.15 gi|161485670|ref|NP_634157.2| - 9.5e-29 99.2 4.8 1.2e-28 98.9 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L14 PF00238.14 gi|161485669|ref|NP_634158.2| - 3e-36 123.8 0.6 3.4e-36 123.6 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e KOW PF00467.24 gi|21228237|ref|NP_634159.1| - 1.2e-05 24.8 0.2 2.6e-05 23.7 0.1 1.6 1 0 0 1 1 1 1 KOW motif Ribosomal_S4e PF00900.15 gi|21228238|ref|NP_634160.1| - 1.5e-26 91.8 0.6 2.8e-26 90.9 0.4 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|21228238|ref|NP_634160.1| - 9.8e-11 41.3 3.2 2e-10 40.3 2.2 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain KOW PF00467.24 gi|21228238|ref|NP_634160.1| - 9.7e-05 21.9 1.9 0.00018 21.1 0.1 2.4 2 0 0 2 2 2 1 KOW motif S4 PF01479.20 gi|21228238|ref|NP_634160.1| - 0.00044 19.6 1.7 0.00058 19.2 0.1 2.1 3 0 0 3 3 3 1 S4 domain Enterotoxin_b PF01376.13 gi|21228238|ref|NP_634160.1| - 0.16 11.8 0.3 0.41 10.5 0.0 1.8 2 0 0 2 2 2 0 Heat-labile enterotoxin beta chain Ribosomal_L5_C PF00673.16 gi|21228239|ref|NP_634161.1| - 5e-26 90.2 0.0 7.2e-26 89.7 0.0 1.2 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|21228239|ref|NP_634161.1| - 1.2e-14 53.7 0.1 2.3e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.16 gi|21228240|ref|NP_634162.1| - 7.1e-20 70.1 3.4 8e-20 69.9 2.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.9 gi|21228240|ref|NP_634162.1| - 0.0004 19.7 1.6 0.0005 19.4 1.1 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.1 gi|21228240|ref|NP_634162.1| - 0.00054 19.6 0.3 0.0006 19.4 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf-UBR PF02207.15 gi|21228240|ref|NP_634162.1| - 0.027 14.1 0.4 0.031 14.0 0.2 1.1 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) DUF2318 PF10080.4 gi|21228240|ref|NP_634162.1| - 0.027 14.2 0.4 0.027 14.2 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF1451 PF07295.6 gi|21228240|ref|NP_634162.1| - 0.037 13.8 0.3 0.04 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) Ribosomal_L37ae PF01780.14 gi|21228240|ref|NP_634162.1| - 0.039 13.8 0.5 0.046 13.5 0.3 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family A2L_zn_ribbon PF08792.5 gi|21228240|ref|NP_634162.1| - 0.07 12.6 3.0 0.11 12.0 2.1 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain Rsm1 PF08600.5 gi|21228240|ref|NP_634162.1| - 0.88 9.4 4.9 7.2 6.5 0.3 2.0 1 1 1 2 2 2 0 Rsm1-like zf-C2HC_2 PF13913.1 gi|21228240|ref|NP_634162.1| - 4.8 6.9 8.5 15 5.3 0.2 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF2757 PF10955.3 gi|21228240|ref|NP_634162.1| - 7.3 6.8 6.6 4.6 7.5 0.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2757) Ribosomal_S8 PF00410.14 gi|21228241|ref|NP_634163.1| - 1.5e-24 86.2 0.0 2.1e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.18 gi|21228242|ref|NP_634164.1| - 2.1e-30 105.0 6.6 1e-16 61.1 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.16 gi|21228242|ref|NP_634164.1| - 0.015 15.1 0.8 7.6 6.4 0.1 2.9 4 0 0 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.13 gi|21228243|ref|NP_634165.1| - 3.1e-38 130.2 0.0 3.7e-38 129.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.15 gi|21228244|ref|NP_634166.1| - 5.1e-59 198.2 6.9 5.9e-59 198.0 4.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e SHOCT PF09851.4 gi|21228244|ref|NP_634166.1| - 0.077 12.4 0.2 0.24 10.9 0.2 2.0 1 0 0 1 1 1 0 Short C-terminal domain Ribosomal_L18p PF00861.17 gi|161485668|ref|NP_634167.2| - 7.3e-27 93.9 0.0 8.8e-27 93.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L18p/L5e family Ribosomal_S5 PF00333.15 gi|21228246|ref|NP_634168.1| - 8.6e-28 95.8 0.4 1.8e-27 94.8 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|21228246|ref|NP_634168.1| - 6.1e-25 86.2 0.5 9.9e-25 85.6 0.4 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.15 gi|21228247|ref|NP_634169.1| - 1.4e-20 72.6 0.2 2.7e-20 71.6 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|21228248|ref|NP_634170.1| - 5.3e-33 114.1 1.1 6.1e-33 113.9 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 SecY PF00344.15 gi|21228249|ref|NP_634171.1| - 8.8e-97 324.1 27.2 1.1e-96 323.8 18.8 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|21228249|ref|NP_634171.1| - 3.9e-11 42.2 0.9 1.4e-10 40.5 0.6 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p Syndecan PF01034.15 gi|21228249|ref|NP_634171.1| - 8 6.1 9.4 6.5 6.4 1.5 3.4 3 0 0 3 3 3 0 Syndecan domain ADK PF00406.17 gi|21228250|ref|NP_634172.1| - 2.6e-61 205.9 0.0 3.1e-61 205.6 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase ADK_lid PF05191.9 gi|21228250|ref|NP_634172.1| - 2.3e-14 52.7 2.8 4.2e-14 51.9 2.0 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_17 PF13207.1 gi|21228250|ref|NP_634172.1| - 3.6e-10 40.6 0.1 6e-10 39.9 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|21228250|ref|NP_634172.1| - 9.4e-05 22.3 0.0 0.00017 21.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21228250|ref|NP_634172.1| - 0.00016 22.0 0.8 0.00069 19.9 0.1 2.3 2 1 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.12 gi|21228250|ref|NP_634172.1| - 0.053 12.8 0.1 11 5.2 0.0 2.8 3 0 0 3 3 3 0 Thymidylate kinase TF_Zn_Ribbon PF08271.7 gi|21228250|ref|NP_634172.1| - 0.07 12.4 0.9 0.13 11.5 0.6 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding AAA PF00004.24 gi|21228250|ref|NP_634172.1| - 0.071 13.3 0.0 0.18 12.0 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.16 gi|21228250|ref|NP_634172.1| - 0.075 12.1 0.0 0.12 11.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.1 gi|21228250|ref|NP_634172.1| - 0.12 12.4 0.0 0.23 11.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain Cys_rich_CPCC PF14206.1 gi|21228250|ref|NP_634172.1| - 0.13 11.8 0.5 0.21 11.1 0.4 1.3 1 0 0 1 1 1 0 Cysteine-rich CPCC AIRC PF00731.15 gi|21228251|ref|NP_634173.1| - 1.7e-56 189.6 1.8 2e-56 189.4 1.2 1.0 1 0 0 1 1 1 1 AIR carboxylase TroA PF01297.12 gi|21228251|ref|NP_634173.1| - 0.041 13.1 0.3 0.076 12.2 0.0 1.5 2 0 0 2 2 2 0 Periplasmic solute binding protein family MarR_2 PF12802.2 gi|21228252|ref|NP_634174.1| - 1.5e-07 30.9 0.1 2e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|21228252|ref|NP_634174.1| - 1e-06 28.4 0.3 1.4e-06 28.0 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.17 gi|21228252|ref|NP_634174.1| - 1.6e-06 27.7 0.1 3.1e-06 26.7 0.1 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|21228252|ref|NP_634174.1| - 3.1e-06 26.7 0.1 6.3e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|21228252|ref|NP_634174.1| - 8.3e-06 25.0 0.1 1.2e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|21228252|ref|NP_634174.1| - 1.5e-05 24.9 0.2 1.9e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.12 gi|21228252|ref|NP_634174.1| - 3.3e-05 23.4 0.1 4.3e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|21228252|ref|NP_634174.1| - 4e-05 23.8 0.1 5.9e-05 23.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|21228252|ref|NP_634174.1| - 9e-05 22.5 0.0 0.00018 21.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.2 gi|21228252|ref|NP_634174.1| - 0.00014 21.5 0.1 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.4 gi|21228252|ref|NP_634174.1| - 0.00015 21.6 0.2 0.00073 19.3 0.2 1.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF4364 PF14277.1 gi|21228252|ref|NP_634174.1| - 0.00035 20.2 0.1 0.00065 19.3 0.0 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) DUF505 PF04458.7 gi|21228252|ref|NP_634174.1| - 0.00035 18.8 0.2 0.00035 18.8 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF505) Replic_Relax PF13814.1 gi|21228252|ref|NP_634174.1| - 0.00066 19.5 0.0 0.00077 19.3 0.0 1.1 1 0 0 1 1 1 1 Replication-relaxation HTH_11 PF08279.7 gi|21228252|ref|NP_634174.1| - 0.0007 19.2 0.2 0.0011 18.5 0.2 1.3 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.15 gi|21228252|ref|NP_634174.1| - 0.00076 19.5 0.1 0.0012 18.9 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_Crp_2 PF13545.1 gi|21228252|ref|NP_634174.1| - 0.00088 19.0 0.1 0.0013 18.4 0.1 1.4 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain PadR PF03551.9 gi|21228252|ref|NP_634174.1| - 0.00089 18.9 0.1 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Phage_rep_org_N PF09681.5 gi|21228252|ref|NP_634174.1| - 0.0013 18.3 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) TFIIE_alpha PF02002.12 gi|21228252|ref|NP_634174.1| - 0.0015 18.0 0.8 0.0018 17.7 0.5 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit Rio2_N PF09202.6 gi|21228252|ref|NP_634174.1| - 0.0047 16.9 0.0 0.0062 16.5 0.0 1.2 1 0 0 1 1 1 1 Rio2, N-terminal FeoC PF09012.5 gi|21228252|ref|NP_634174.1| - 0.0058 16.3 0.1 0.0078 15.8 0.0 1.2 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_5 PF01022.15 gi|21228252|ref|NP_634174.1| - 0.0097 15.5 0.1 0.016 14.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family B-block_TFIIIC PF04182.7 gi|21228252|ref|NP_634174.1| - 0.012 15.4 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC GntR PF00392.16 gi|21228252|ref|NP_634174.1| - 0.022 14.1 0.1 0.038 13.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.11 gi|21228252|ref|NP_634174.1| - 0.028 13.9 0.0 0.064 12.8 0.0 1.7 2 0 0 2 2 1 0 LexA DNA binding domain DUF1495 PF07381.6 gi|21228252|ref|NP_634174.1| - 0.031 13.9 0.2 0.51 10.0 0.1 2.0 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_IclR PF09339.5 gi|21228252|ref|NP_634174.1| - 0.042 13.4 0.1 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF3116 PF11313.3 gi|21228252|ref|NP_634174.1| - 0.043 13.4 0.6 0.064 12.8 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) RPA_C PF08784.6 gi|21228252|ref|NP_634174.1| - 0.065 13.6 0.0 0.099 13.0 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal Mrr_N PF14338.1 gi|21228252|ref|NP_634174.1| - 0.069 13.2 0.1 0.094 12.8 0.1 1.3 1 0 0 1 1 1 0 Mrr N-terminal domain Lipoprotein_9 PF03180.9 gi|21228252|ref|NP_634174.1| - 0.071 11.9 0.1 0.081 11.8 0.1 1.1 1 0 0 1 1 1 0 NLPA lipoprotein HTH_28 PF13518.1 gi|21228252|ref|NP_634174.1| - 0.08 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Ribosomal_S19e PF01090.14 gi|21228252|ref|NP_634174.1| - 0.083 12.3 0.1 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S19e HTH_29 PF13551.1 gi|21228252|ref|NP_634174.1| - 0.1 12.7 0.0 0.15 12.2 0.0 1.4 1 1 0 1 1 1 0 Winged helix-turn helix Crp PF00325.15 gi|21228252|ref|NP_634174.1| - 0.11 12.0 0.0 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family DUF4393 PF14337.1 gi|21228252|ref|NP_634174.1| - 0.12 11.8 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) Hexapep PF00132.19 gi|21228253|ref|NP_634175.1| - 5.7e-17 60.3 14.8 3.9e-08 32.4 1.1 4.7 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21228253|ref|NP_634175.1| - 6e-06 25.7 17.0 0.019 14.5 0.4 5.0 4 1 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.7 gi|21228253|ref|NP_634175.1| - 0.095 11.2 2.7 0.24 9.8 1.5 1.7 1 1 0 1 1 1 0 L-fucokinase DUF188 PF02639.9 gi|21228253|ref|NP_634175.1| - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 DUF106 PF01956.11 gi|21228254|ref|NP_634176.1| - 8.9e-46 155.4 8.1 1.1e-45 155.1 5.6 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF106 60KD_IMP PF02096.15 gi|21228254|ref|NP_634176.1| - 0.00079 19.1 10.0 0.0016 18.0 6.9 1.5 1 1 0 1 1 1 1 60Kd inner membrane protein Cytidylate_kin2 PF13189.1 gi|21228255|ref|NP_634177.1| - 1.8e-20 73.5 2.4 8.2e-20 71.4 1.7 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.1 gi|21228255|ref|NP_634177.1| - 2e-11 44.2 0.2 3e-11 43.7 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21228255|ref|NP_634177.1| - 1e-10 42.4 0.7 3.6e-10 40.7 0.1 1.8 1 1 1 2 2 2 1 AAA domain SKI PF01202.17 gi|21228255|ref|NP_634177.1| - 0.00012 21.9 0.9 0.00043 20.1 0.6 1.7 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.1 gi|21228255|ref|NP_634177.1| - 0.00027 20.8 0.0 0.001 18.9 0.0 1.9 1 1 0 1 1 1 1 AAA domain ADK PF00406.17 gi|21228255|ref|NP_634177.1| - 0.0007 19.5 0.1 0.0016 18.3 0.0 1.6 2 0 0 2 2 2 1 Adenylate kinase dNK PF01712.14 gi|21228255|ref|NP_634177.1| - 0.064 13.1 0.8 0.1 12.5 0.6 1.5 1 0 0 1 1 1 0 Deoxynucleoside kinase RHH_1 PF01402.16 gi|21228255|ref|NP_634177.1| - 0.34 10.8 4.5 4.7 7.2 0.0 3.0 4 0 0 4 4 4 0 Ribbon-helix-helix protein, copG family DKCLD PF08068.7 gi|21228256|ref|NP_634178.1| - 4.3e-24 84.1 0.2 9.6e-24 83.0 0.1 1.6 1 0 0 1 1 1 1 DKCLD (NUC011) domain TruB_N PF01509.13 gi|21228256|ref|NP_634178.1| - 8.9e-22 77.8 1.6 1.4e-17 64.2 1.1 3.5 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.15 gi|21228256|ref|NP_634178.1| - 1e-16 60.4 0.0 1.9e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 PUA domain Ribosomal_S13 PF00416.17 gi|21228257|ref|NP_634179.1| - 1.2e-29 102.8 0.0 1.6e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH PF00633.18 gi|21228257|ref|NP_634179.1| - 0.026 14.2 0.3 0.073 12.8 0.2 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif S4 PF01479.20 gi|21228258|ref|NP_634180.1| - 1.7e-14 52.9 0.4 9.1e-14 50.6 0.0 2.2 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.14 gi|21228258|ref|NP_634180.1| - 0.0067 16.7 1.4 0.017 15.4 0.2 2.1 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S11 PF00411.14 gi|21228259|ref|NP_634181.1| - 1e-42 144.7 1.1 1.2e-42 144.5 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.5 gi|21228259|ref|NP_634181.1| - 0.09 12.2 0.4 0.15 11.5 0.2 1.4 1 1 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) RNA_pol_A_bac PF01000.21 gi|21228260|ref|NP_634182.1| - 5.5e-28 97.3 0.0 2.3e-27 95.3 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|21228260|ref|NP_634182.1| - 6.8e-10 37.9 0.0 8.6e-10 37.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.2 gi|21228260|ref|NP_634182.1| - 1.9e-06 28.1 10.7 1.9e-06 28.1 7.4 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228260|ref|NP_634182.1| - 2.2e-06 27.7 10.5 2.2e-06 27.7 7.2 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21228260|ref|NP_634182.1| - 5.1e-05 23.2 11.6 0.13 12.3 5.4 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21228260|ref|NP_634182.1| - 5.4e-05 22.6 21.1 0.0032 17.0 0.9 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21228260|ref|NP_634182.1| - 5.7e-05 22.8 10.6 5.7e-05 22.8 7.4 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21228260|ref|NP_634182.1| - 0.0016 18.2 5.2 0.0016 18.2 3.6 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21228260|ref|NP_634182.1| - 0.0024 18.5 15.4 0.024 15.3 1.7 3.1 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|21228260|ref|NP_634182.1| - 0.22 11.8 18.9 0.62 10.4 2.8 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21228260|ref|NP_634182.1| - 3.3 7.6 22.6 0.078 12.8 9.4 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228260|ref|NP_634182.1| - 3.7 7.6 24.1 0.48 10.4 3.0 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Lactonase PF10282.4 gi|21228261|ref|NP_634183.1| - 2.1e-16 59.9 5.1 2.4e-09 36.7 0.1 3.3 1 1 1 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21228261|ref|NP_634183.1| - 1.1e-08 33.7 3.8 4.2e-05 22.0 0.2 3.1 2 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.16 gi|21228261|ref|NP_634183.1| - 1.1e-08 34.5 14.7 0.22 11.5 2.2 5.6 5 0 0 5 5 5 4 NHL repeat SGL PF08450.7 gi|21228261|ref|NP_634183.1| - 8.7e-07 28.5 10.4 0.019 14.3 1.1 3.6 1 1 2 3 3 3 3 SMP-30/Gluconolaconase/LRE-like region Arylesterase PF01731.15 gi|21228261|ref|NP_634183.1| - 2.1e-06 27.6 14.9 0.18 11.8 0.2 6.4 3 2 3 6 6 6 3 Arylesterase SBP56 PF05694.6 gi|21228261|ref|NP_634183.1| - 0.00023 19.7 0.3 3.2 6.1 0.0 4.5 3 1 3 6 6 6 1 56kDa selenium binding protein (SBP56) Str_synth PF03088.11 gi|21228261|ref|NP_634183.1| - 0.0025 17.8 0.3 3 7.9 0.0 4.7 5 1 1 6 6 6 1 Strictosidine synthase ThaI PF15514.1 gi|21228261|ref|NP_634183.1| - 0.018 14.3 0.5 3.2 6.9 0.1 2.6 2 0 0 2 2 2 0 Restriction endonuclease ThaI PD40 PF07676.7 gi|21228261|ref|NP_634183.1| - 0.018 14.6 1.0 13 5.5 0.0 4.2 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat FixG_C PF11614.3 gi|21228261|ref|NP_634183.1| - 0.035 14.1 0.9 0.16 12.0 0.1 2.5 2 1 1 3 3 3 0 IG-like fold at C-terminal of FixG, putative oxidoreductase Glyco_hydro_42C PF08533.5 gi|21228261|ref|NP_634183.1| - 0.055 12.9 0.5 3.5 7.1 0.0 2.9 2 1 0 2 2 2 0 Beta-galactosidase C-terminal domain SH3_6 PF12913.2 gi|21228261|ref|NP_634183.1| - 0.058 12.6 0.2 27 4.0 0.0 3.6 4 0 0 4 4 4 0 SH3 domain of the SH3b1 type OppC_N PF12911.2 gi|21228261|ref|NP_634183.1| - 0.098 12.0 0.1 0.098 12.0 0.1 1.8 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CPSase_L_chain PF00289.17 gi|21228261|ref|NP_634183.1| - 0.56 10.3 3.7 16 5.6 2.6 2.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, N-terminal domain DUF2892 PF11127.3 gi|21228262|ref|NP_634184.1| - 0.021 14.6 0.1 6.3 6.6 0.0 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) Hexapep PF00132.19 gi|21228263|ref|NP_634185.1| - 3.7e-21 73.6 18.2 3.6e-10 38.8 1.6 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21228263|ref|NP_634185.1| - 7.1e-09 35.0 13.2 3.2e-06 26.5 1.3 3.3 2 1 1 3 3 3 3 Hexapeptide repeat of succinyl-transferase MIT PF04212.13 gi|21228263|ref|NP_634185.1| - 0.016 15.0 0.7 0.026 14.4 0.5 1.3 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain Na_H_Exchanger PF00999.16 gi|21228264|ref|NP_634186.1| - 0.002 16.7 0.2 0.002 16.7 0.1 1.3 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family DUF912 PF06024.7 gi|21228264|ref|NP_634186.1| - 0.066 13.2 2.8 2.2 8.4 0.1 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF912) DUF1422 PF07226.6 gi|21228264|ref|NP_634186.1| - 0.15 11.7 2.2 3.8 7.2 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1422) Rab5ip PF07019.7 gi|21228264|ref|NP_634186.1| - 0.47 10.6 3.0 0.16 12.1 0.3 1.7 2 0 0 2 2 2 0 Rab5-interacting protein (Rab5ip) cobW PF02492.14 gi|21228265|ref|NP_634187.1| - 1.4e-36 125.6 1.4 1.7e-36 125.3 1.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|21228265|ref|NP_634187.1| - 4.8e-06 25.5 1.8 0.018 13.7 0.4 2.1 2 0 0 2 2 2 2 ArgK protein MobB PF03205.9 gi|21228265|ref|NP_634187.1| - 1.9e-05 24.3 0.0 3.6e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|21228265|ref|NP_634187.1| - 0.001 19.0 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Arch_ATPase PF01637.13 gi|21228265|ref|NP_634187.1| - 0.0015 18.3 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase NTPase_1 PF03266.10 gi|21228265|ref|NP_634187.1| - 0.0039 16.9 0.1 0.013 15.2 0.0 1.9 1 1 1 2 2 2 1 NTPase AAA_18 PF13238.1 gi|21228265|ref|NP_634187.1| - 0.0044 17.3 0.1 0.011 16.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.12 gi|21228265|ref|NP_634187.1| - 0.0061 16.1 0.1 0.012 15.1 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_17 PF13207.1 gi|21228265|ref|NP_634187.1| - 0.0077 17.0 0.2 0.016 16.0 0.1 1.6 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|21228265|ref|NP_634187.1| - 0.0084 15.5 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain CbiA PF01656.18 gi|21228265|ref|NP_634187.1| - 0.0089 15.4 1.8 0.023 14.0 1.2 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Pox_A32 PF04665.7 gi|21228265|ref|NP_634187.1| - 0.012 14.9 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_22 PF13401.1 gi|21228265|ref|NP_634187.1| - 0.013 15.6 0.0 0.027 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|21228265|ref|NP_634187.1| - 0.017 15.0 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|21228265|ref|NP_634187.1| - 0.017 14.0 0.0 0.032 13.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NB-ARC PF00931.17 gi|21228265|ref|NP_634187.1| - 0.021 13.6 0.1 0.033 13.0 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain KAP_NTPase PF07693.9 gi|21228265|ref|NP_634187.1| - 0.024 13.6 0.0 0.024 13.6 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_19 PF13245.1 gi|21228265|ref|NP_634187.1| - 0.028 14.1 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain AAA_33 PF13671.1 gi|21228265|ref|NP_634187.1| - 0.05 13.4 0.0 0.082 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|21228265|ref|NP_634187.1| - 0.098 12.1 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Miro PF08477.8 gi|21228265|ref|NP_634187.1| - 0.099 13.1 0.0 0.25 11.8 0.0 1.8 2 0 0 2 2 2 0 Miro-like protein UPF0079 PF02367.12 gi|21228265|ref|NP_634187.1| - 0.11 12.1 0.1 0.23 11.0 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 HupF_HypC PF01455.13 gi|21228266|ref|NP_634188.1| - 5.8e-21 74.2 0.8 7.2e-21 73.9 0.6 1.1 1 0 0 1 1 1 1 HupF/HypC family HTH_29 PF13551.1 gi|21228267|ref|NP_634189.1| - 8.3e-18 64.5 0.1 2e-17 63.3 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_33 PF13592.1 gi|21228267|ref|NP_634189.1| - 2.5e-16 58.9 1.3 1.1e-14 53.6 0.0 2.6 2 1 1 3 3 3 1 Winged helix-turn helix HTH_23 PF13384.1 gi|21228267|ref|NP_634189.1| - 8e-14 50.7 0.0 1.2e-12 46.9 0.0 2.4 2 1 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21228267|ref|NP_634189.1| - 1.2e-13 50.7 0.1 1.6e-12 47.1 0.0 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_32 PF13565.1 gi|21228267|ref|NP_634189.1| - 8.1e-13 48.9 0.0 3.1e-11 43.8 0.0 2.2 2 1 1 3 3 3 2 Homeodomain-like domain Terminase_5 PF06056.7 gi|21228267|ref|NP_634189.1| - 1.8e-05 24.1 0.0 3.8e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.1 gi|21228267|ref|NP_634189.1| - 5.4e-05 22.6 0.0 0.00012 21.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_psq PF05225.11 gi|21228267|ref|NP_634189.1| - 0.00037 19.9 0.0 0.0029 17.1 0.0 2.1 2 0 0 2 2 2 1 helix-turn-helix, Psq domain LZ_Tnp_IS481 PF13011.1 gi|21228267|ref|NP_634189.1| - 0.0005 20.3 0.1 0.0031 17.8 0.0 2.0 2 0 0 2 2 2 1 leucine-zipper of insertion element IS481 HTH_Tnp_4 PF13613.1 gi|21228267|ref|NP_634189.1| - 0.00066 19.1 0.0 0.0015 18.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.7 gi|21228267|ref|NP_634189.1| - 0.00094 18.7 0.0 0.0025 17.4 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_Tnp_IS630 PF01710.11 gi|21228267|ref|NP_634189.1| - 0.0011 18.6 0.0 0.0024 17.5 0.0 1.6 2 0 0 2 2 2 1 Transposase HTH_30 PF13556.1 gi|21228267|ref|NP_634189.1| - 0.0012 18.3 0.0 0.0025 17.3 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_Tnp_1 PF01527.15 gi|21228267|ref|NP_634189.1| - 0.0014 18.5 0.6 0.0027 17.6 0.0 1.8 2 0 0 2 2 1 1 Transposase HTH_10 PF04967.7 gi|21228267|ref|NP_634189.1| - 0.0023 17.5 0.1 4.5 6.9 0.0 3.1 3 0 0 3 3 3 1 HTH DNA binding domain DUF2481 PF10654.4 gi|21228267|ref|NP_634189.1| - 0.0055 16.3 0.0 1.4 8.6 0.0 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF2481) HTH_17 PF12728.2 gi|21228267|ref|NP_634189.1| - 0.007 16.6 0.0 0.051 13.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_40 PF14493.1 gi|21228267|ref|NP_634189.1| - 0.0084 16.3 0.0 0.018 15.2 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|21228267|ref|NP_634189.1| - 0.0088 15.1 0.0 0.09 11.9 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 Mga PF05043.8 gi|21228267|ref|NP_634189.1| - 0.009 16.2 0.6 1.9 8.8 0.0 2.5 2 1 0 2 2 2 1 Mga helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|21228267|ref|NP_634189.1| - 0.011 15.2 0.0 0.024 14.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_36 PF13730.1 gi|21228267|ref|NP_634189.1| - 0.017 15.2 0.0 0.048 13.8 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain DUF2089 PF09862.4 gi|21228267|ref|NP_634189.1| - 0.02 14.6 0.1 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) SpoIIID PF12116.3 gi|21228267|ref|NP_634189.1| - 0.027 14.3 0.1 1.9 8.4 0.0 2.4 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_7 PF02796.10 gi|21228267|ref|NP_634189.1| - 0.031 14.1 0.0 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.2 gi|21228267|ref|NP_634189.1| - 0.039 13.6 0.0 0.21 11.2 0.0 2.1 3 0 0 3 3 2 0 MarR family HTH_IclR PF09339.5 gi|21228267|ref|NP_634189.1| - 0.05 13.1 0.0 0.094 12.3 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain GntR PF00392.16 gi|21228267|ref|NP_634189.1| - 0.052 13.0 0.0 0.29 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family TrmB PF01978.14 gi|21228267|ref|NP_634189.1| - 0.053 13.2 0.1 0.21 11.3 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_3 PF01381.17 gi|21228267|ref|NP_634189.1| - 0.074 12.9 0.0 0.26 11.1 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix HTH_24 PF13412.1 gi|21228267|ref|NP_634189.1| - 0.12 11.8 0.0 1.3 8.5 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DDE_3 PF13358.1 gi|21228268|ref|NP_634190.1| - 0.00072 19.3 0.0 0.00099 18.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease MULE PF10551.4 gi|21228269|ref|NP_634191.1| - 3.2e-11 43.2 0.0 7.6e-11 42.0 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21228269|ref|NP_634191.1| - 8.1e-05 21.9 1.5 0.00051 19.3 1.1 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21228269|ref|NP_634191.1| - 0.021 14.4 1.9 0.03 13.8 0.6 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family zf-ribbon_3 PF13248.1 gi|21228269|ref|NP_634191.1| - 0.51 9.6 2.7 0.26 10.5 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain DDE_3 PF13358.1 gi|21228270|ref|NP_634192.1| - 8e-10 38.6 0.2 9.5e-10 38.3 0.2 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Oxidored_q6 PF01058.17 gi|21228271|ref|NP_634193.1| - 4.2e-33 113.7 1.9 9.7e-33 112.5 0.0 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.1 gi|21228271|ref|NP_634193.1| - 4.2e-29 100.4 7.2 2.5e-28 97.9 1.4 3.1 3 0 0 3 3 3 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.4 gi|21228271|ref|NP_634193.1| - 0.049 13.6 1.0 0.049 13.6 0.7 3.1 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.14 gi|21228272|ref|NP_634194.1| - 2.8e-71 240.8 0.0 5.2e-44 150.8 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Cytochrom_B_N PF00033.14 gi|21228273|ref|NP_634195.1| - 9.5e-05 21.8 21.0 0.00044 19.6 14.6 1.9 1 1 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.1 gi|21228273|ref|NP_634195.1| - 0.0016 18.5 22.1 0.42 10.7 1.7 3.3 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.15 gi|21228273|ref|NP_634195.1| - 0.0071 15.7 22.0 0.09 12.1 15.3 2.1 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4134 PF13572.1 gi|21228273|ref|NP_634195.1| - 0.06 13.4 0.2 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4134) HycI PF01750.13 gi|21228274|ref|NP_634196.1| - 8.1e-31 106.2 1.3 9.3e-31 106.0 0.9 1.0 1 0 0 1 1 1 1 Hydrogenase maturation protease PG_binding_1 PF01471.13 gi|21228276|ref|NP_634198.1| - 5.6e-12 45.4 0.0 8.8e-12 44.8 0.0 1.3 1 0 0 1 1 1 1 Putative peptidoglycan binding domain PG_binding_3 PF09374.5 gi|21228276|ref|NP_634198.1| - 0.011 15.7 0.0 0.094 12.7 0.0 2.1 1 1 1 2 2 2 0 Predicted Peptidoglycan domain NiFe_hyd_SSU_C PF14720.1 gi|21228277|ref|NP_634199.1| - 5.5e-29 100.0 3.6 9.4e-29 99.2 2.5 1.4 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.17 gi|21228277|ref|NP_634199.1| - 3.8e-24 84.7 0.0 5.7e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit TAT_signal PF10518.4 gi|21228277|ref|NP_634199.1| - 0.48 10.5 0.1 0.48 10.5 0.1 2.6 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.14 gi|21228278|ref|NP_634200.1| - 6.7e-75 252.7 0.0 5.2e-48 164.0 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Cytochrom_B_N PF00033.14 gi|21228279|ref|NP_634201.1| - 2.2e-09 36.9 22.1 1.7e-08 34.0 15.3 1.9 1 1 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB Ni_hydr_CYTB PF01292.15 gi|21228279|ref|NP_634201.1| - 3.4e-05 23.3 20.5 0.00019 20.8 14.2 1.9 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 PsbN PF02468.10 gi|21228279|ref|NP_634201.1| - 0.0051 16.4 3.8 0.0064 16.0 0.1 2.5 2 0 0 2 2 2 1 Photosystem II reaction centre N protein (psbN) DUF4405 PF14358.1 gi|21228279|ref|NP_634201.1| - 0.014 15.5 23.8 0.24 11.5 2.8 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4405) PAS_9 PF13426.1 gi|21228280|ref|NP_634202.1| - 6.7e-33 113.1 0.2 6.1e-15 55.4 0.0 3.7 3 0 0 3 3 3 3 PAS domain MEDS PF14417.1 gi|21228280|ref|NP_634202.1| - 2.4e-31 108.3 0.2 4.5e-31 107.4 0.1 1.5 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HATPase_c PF02518.21 gi|21228280|ref|NP_634202.1| - 2.4e-31 107.6 0.0 4.9e-31 106.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|21228280|ref|NP_634202.1| - 8.3e-25 86.7 0.0 7.1e-12 45.1 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.5 gi|21228280|ref|NP_634202.1| - 3.2e-22 78.6 0.0 5.2e-10 39.3 0.0 3.9 4 0 0 4 4 4 2 PAS fold HisKA PF00512.20 gi|21228280|ref|NP_634202.1| - 1.7e-18 66.3 0.0 5.3e-18 64.7 0.0 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.1 gi|21228280|ref|NP_634202.1| - 1.9e-18 65.5 0.0 3.4e-06 26.7 0.0 3.7 3 0 0 3 3 3 3 PAS domain PAS_7 PF12860.2 gi|21228280|ref|NP_634202.1| - 4e-05 23.5 0.1 0.96 9.4 0.0 4.0 3 1 0 3 3 3 2 PAS fold HATPase_c_5 PF14501.1 gi|21228280|ref|NP_634202.1| - 5.9e-05 22.7 0.4 0.00035 20.2 0.0 2.5 3 0 0 3 3 3 1 GHKL domain HATPase_c_3 PF13589.1 gi|21228280|ref|NP_634202.1| - 9.2e-05 22.1 0.0 0.00022 20.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|21228280|ref|NP_634202.1| - 0.0075 16.0 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_11 PF14598.1 gi|21228280|ref|NP_634202.1| - 0.022 14.7 0.2 3.3 7.6 0.1 2.6 2 0 0 2 2 2 0 PAS domain PAS_3 PF08447.6 gi|21228280|ref|NP_634202.1| - 0.08 13.0 0.0 0.6 10.2 0.0 2.4 2 0 0 2 2 2 0 PAS fold CGI-121 PF08617.5 gi|21228281|ref|NP_634203.1| - 7.9e-26 90.6 0.0 9.3e-26 90.4 0.0 1.0 1 0 0 1 1 1 1 Kinase binding protein CGI-121 GATase PF00117.23 gi|21228282|ref|NP_634204.1| - 1.2e-17 63.9 0.0 1.6e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21228282|ref|NP_634204.1| - 9.8e-05 21.8 0.0 0.0022 17.4 0.0 2.1 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.9 gi|21228282|ref|NP_634204.1| - 0.0036 16.8 0.0 0.0065 16.0 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain FBPase_glpX PF03320.8 gi|21228283|ref|NP_634205.1| - 8.2e-116 385.9 5.0 9.4e-116 385.7 3.5 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Radical_SAM PF04055.16 gi|21228284|ref|NP_634206.1| - 5e-23 82.0 0.1 4.9e-22 78.8 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.15 gi|21228284|ref|NP_634206.1| - 1.9e-17 62.8 0.1 4.4e-17 61.6 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.15 gi|21228284|ref|NP_634206.1| - 1.2e-06 28.1 0.0 2.3e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 TRAM domain RE_AlwI PF09491.5 gi|21228284|ref|NP_634206.1| - 0.072 11.5 0.1 0.3 9.5 0.2 1.8 2 0 0 2 2 2 0 AlwI restriction endonuclease M20_dimer PF07687.9 gi|21228284|ref|NP_634206.1| - 0.1 12.3 0.0 0.36 10.5 0.0 1.9 2 0 0 2 2 2 0 Peptidase dimerisation domain UPF0449 PF15136.1 gi|21228284|ref|NP_634206.1| - 0.15 12.3 0.3 24 5.2 0.0 2.8 3 0 0 3 3 3 0 Uncharacterised protein family UPF0449 TBP PF00352.16 gi|21228286|ref|NP_634208.1| - 2.4e-60 199.8 0.3 3.5e-30 103.2 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|21228286|ref|NP_634208.1| - 5.4e-06 26.3 0.0 0.092 12.8 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3149 PF11346.3 gi|21228287|ref|NP_634209.1| - 0.35 10.4 0.9 0.81 9.3 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) Gram_pos_anchor PF00746.16 gi|21228290|ref|NP_634212.1| - 0.08 12.7 0.9 0.08 12.7 0.6 1.8 2 0 0 2 2 2 0 Gram positive anchor Rubrerythrin PF02915.12 gi|21228291|ref|NP_634213.1| - 4e-25 88.7 2.9 4.9e-25 88.4 2.0 1.1 1 0 0 1 1 1 1 Rubrerythrin Rubredoxin PF00301.15 gi|21228291|ref|NP_634213.1| - 0.0034 17.2 4.5 0.078 12.8 3.2 2.4 1 1 0 1 1 1 1 Rubredoxin DZR PF12773.2 gi|21228291|ref|NP_634213.1| - 0.011 15.4 0.3 0.018 14.8 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Ferritin PF00210.19 gi|21228291|ref|NP_634213.1| - 0.029 14.1 2.2 0.038 13.7 1.5 1.4 1 1 0 1 1 1 0 Ferritin-like domain zf-RING_5 PF14634.1 gi|21228291|ref|NP_634213.1| - 0.23 11.2 0.9 0.36 10.5 0.6 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-ribbon_3 PF13248.1 gi|21228291|ref|NP_634213.1| - 0.23 10.7 1.4 6.6 6.0 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.1 gi|21228291|ref|NP_634213.1| - 0.28 10.9 2.3 0.51 10.1 1.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RRN7 PF11781.3 gi|21228291|ref|NP_634213.1| - 0.37 10.3 5.0 1 8.9 0.2 2.3 1 1 1 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 Abi PF02517.11 gi|21228292|ref|NP_634214.1| - 4.4e-12 45.9 19.2 1.7e-11 44.0 13.3 2.2 1 1 0 1 1 1 1 CAAX protease self-immunity HNH PF01844.18 gi|21228293|ref|NP_634215.1| - 2.4e-06 27.3 2.5 4.9e-06 26.3 1.7 1.5 1 0 0 1 1 1 1 HNH endonuclease Endonuclease_7 PF02945.10 gi|21228293|ref|NP_634215.1| - 0.00015 21.3 0.6 0.00021 20.9 0.4 1.3 1 0 0 1 1 1 1 Recombination endonuclease VII DDE_Tnp_1_6 PF13751.1 gi|21228294|ref|NP_634216.1| - 2.6e-29 101.7 2.0 8.1e-29 100.1 1.0 2.2 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|21228294|ref|NP_634216.1| - 1.2e-19 70.7 0.3 2.7e-19 69.5 0.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.6 gi|21228294|ref|NP_634216.1| - 4.4e-18 64.9 0.1 1.5e-17 63.2 0.0 2.0 2 0 0 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.1 gi|21228294|ref|NP_634216.1| - 0.0033 17.5 0.1 0.14 12.3 0.0 2.8 2 0 0 2 2 2 1 Transposase DDE domain Metallophos PF00149.23 gi|21228295|ref|NP_634217.1| - 2.6e-15 56.3 0.0 4.8e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|21228295|ref|NP_634217.1| - 2.2e-13 50.3 0.0 3.4e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain SMC_N PF02463.14 gi|21228296|ref|NP_634218.1| - 1e-14 54.3 23.1 5.8e-14 51.8 16.0 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|21228296|ref|NP_634218.1| - 2.6e-08 34.1 17.8 1.9e-06 28.0 1.9 3.6 3 1 0 4 4 4 2 AAA domain AAA_29 PF13555.1 gi|21228296|ref|NP_634218.1| - 6.3e-05 22.4 0.0 0.00012 21.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|21228296|ref|NP_634218.1| - 0.00022 21.0 0.0 0.00059 19.7 0.0 1.7 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.1 gi|21228296|ref|NP_634218.1| - 0.00049 20.4 126.0 1.5e+04 -46.3 87.4 6.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|21228296|ref|NP_634218.1| - 0.075 13.3 0.0 0.075 13.3 0.0 5.3 4 2 0 5 5 5 0 ABC transporter PCNP PF15473.1 gi|21228296|ref|NP_634218.1| - 0.15 12.4 0.1 0.15 12.4 0.1 3.0 3 0 0 3 3 3 0 PEST, proteolytic signal-containing nuclear protein family AAA_16 PF13191.1 gi|21228296|ref|NP_634218.1| - 1 9.3 0.0 1 9.3 0.0 4.5 4 1 1 5 5 5 0 AAA ATPase domain Reo_sigmaC PF04582.7 gi|21228296|ref|NP_634218.1| - 1.6 7.8 15.5 3.7 6.6 0.2 4.8 3 2 2 5 5 5 0 Reovirus sigma C capsid protein Bac_luciferase PF00296.15 gi|21228297|ref|NP_634219.1| - 3.9e-66 223.2 0.0 4.3e-66 223.1 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase TPD PF14811.1 gi|21228298|ref|NP_634220.1| - 1.6e-48 163.7 0.2 2.4e-48 163.1 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif N6_Mtase PF02384.11 gi|21228300|ref|NP_634222.1| - 3e-116 387.8 0.0 3.9e-116 387.5 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21228300|ref|NP_634222.1| - 6.1e-29 101.2 0.0 1.6e-28 99.8 0.0 1.7 1 0 0 1 1 1 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21228300|ref|NP_634222.1| - 1.1e-08 35.1 0.0 2.1e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21228300|ref|NP_634222.1| - 3.9e-06 26.5 0.0 8.1e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|21228300|ref|NP_634222.1| - 0.00012 21.4 0.0 0.00026 20.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.10 gi|21228300|ref|NP_634222.1| - 0.011 15.1 0.0 0.087 12.2 0.0 2.1 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methylase_S PF01420.14 gi|21228301|ref|NP_634223.1| - 1.3e-35 122.8 0.5 3.9e-28 98.5 0.2 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain SAP18 PF06487.7 gi|21228301|ref|NP_634223.1| - 0.12 12.1 0.0 2.7 7.8 0.0 2.2 2 0 0 2 2 2 0 Sin3 associated polypeptide p18 (SAP18) PRA1 PF03208.14 gi|21228302|ref|NP_634224.1| - 0.0048 16.2 1.4 0.0067 15.7 1.0 1.2 1 0 0 1 1 1 1 PRA1 family protein FA_desaturase PF00487.19 gi|21228302|ref|NP_634224.1| - 0.063 12.7 0.2 0.067 12.6 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase SecD-TM1 PF13721.1 gi|21228302|ref|NP_634224.1| - 0.11 12.8 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 SecD export protein N-terminal TM region ComX PF05952.7 gi|21228303|ref|NP_634225.1| - 0.018 14.5 2.6 1.9 8.0 0.1 3.6 2 2 1 3 3 3 0 Bacillus competence pheromone ComX HTH_Crp_2 PF13545.1 gi|21228304|ref|NP_634226.1| - 0.078 12.7 0.0 0.19 11.5 0.0 1.6 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain DUF2500 PF10694.4 gi|21228304|ref|NP_634226.1| - 0.1 12.5 0.5 0.18 11.8 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2500) Virulence_RhuM PF13310.1 gi|21228305|ref|NP_634227.1| - 1.3e-120 401.2 8.4 1.7e-120 400.9 5.8 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family Mrr_N PF14338.1 gi|21228305|ref|NP_634227.1| - 0.00061 19.8 0.4 0.11 12.6 0.1 2.8 2 0 0 2 2 2 1 Mrr N-terminal domain Phage_pRha PF09669.5 gi|21228305|ref|NP_634227.1| - 0.01 16.1 0.1 0.15 12.4 0.0 2.6 2 0 0 2 2 2 0 Phage regulatory protein Rha (Phage_pRha) HTH_38 PF13936.1 gi|21228305|ref|NP_634227.1| - 0.014 14.9 0.1 0.053 13.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|21228305|ref|NP_634227.1| - 0.03 13.7 0.0 0.07 12.5 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|21228305|ref|NP_634227.1| - 0.047 13.3 0.0 0.096 12.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3387 PF11867.3 gi|21228306|ref|NP_634228.1| - 4.7e-133 443.2 16.1 8.4e-133 442.4 11.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) HSDR_N PF04313.9 gi|21228306|ref|NP_634228.1| - 4e-50 170.2 0.0 4e-50 170.2 0.0 3.2 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|21228306|ref|NP_634228.1| - 2.2e-17 63.4 0.4 1.2e-15 57.8 0.0 3.1 2 1 1 3 3 3 1 Type III restriction enzyme, res subunit Glyco_hydro_44 PF12891.2 gi|21228306|ref|NP_634228.1| - 8.7e-05 22.1 0.3 0.00027 20.5 0.0 1.9 2 0 0 2 2 2 1 Glycoside hydrolase family 44 DEAD PF00270.24 gi|21228306|ref|NP_634228.1| - 0.00082 18.8 1.3 0.0043 16.5 0.0 2.7 3 1 0 3 3 3 1 DEAD/DEAH box helicase PDDEXK_4 PF14281.1 gi|21228306|ref|NP_634228.1| - 0.0035 17.2 0.0 0.0083 15.9 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily HSDR_N_2 PF13588.1 gi|21228306|ref|NP_634228.1| - 0.0057 16.4 0.0 0.024 14.4 0.0 2.1 2 0 0 2 2 2 1 Type I restriction enzyme R protein N terminus (HSDR_N) Chordopox_G3 PF06129.7 gi|21228306|ref|NP_634228.1| - 0.046 13.8 0.3 0.38 10.9 0.0 2.5 2 0 0 2 2 2 0 Chordopoxvirus G3 protein DUF2285 PF10074.4 gi|21228306|ref|NP_634228.1| - 0.053 13.8 0.4 7 7.0 0.0 2.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2285) Pribosyltran_N PF13793.1 gi|21228307|ref|NP_634229.1| - 2.5e-26 91.6 0.0 6.5e-25 87.1 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|21228307|ref|NP_634229.1| - 4.2e-13 49.1 0.1 9.6e-13 47.9 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|21228307|ref|NP_634229.1| - 1e-07 31.8 0.6 1.6e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|21228307|ref|NP_634229.1| - 9.7e-06 24.9 0.1 1.7e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|21228307|ref|NP_634229.1| - 0.0004 19.7 0.2 0.0012 18.2 0.1 1.8 1 1 0 1 1 1 1 Phosphoribosyl transferase MoaC PF01967.16 gi|21228308|ref|NP_634230.1| - 1.2e-49 167.4 2.1 1.4e-49 167.2 1.5 1.0 1 0 0 1 1 1 1 MoaC family DUF3750 PF12570.3 gi|21228309|ref|NP_634231.1| - 0.036 14.3 0.0 0.038 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3750) Peptidase_C80 PF11713.3 gi|21228309|ref|NP_634231.1| - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase C80 family DUF3117 PF11314.3 gi|21228309|ref|NP_634231.1| - 0.14 11.7 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3117) Carb_kinase PF01256.12 gi|21228310|ref|NP_634232.1| - 1.1e-51 175.5 0.2 1.5e-51 175.0 0.2 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|21228310|ref|NP_634232.1| - 2.3e-41 141.2 0.1 7.5e-40 136.2 0.0 2.1 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.10 gi|21228310|ref|NP_634232.1| - 2e-11 43.5 0.1 4.9e-10 39.0 0.0 2.2 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Glyco_trans_1_4 PF13692.1 gi|21228310|ref|NP_634232.1| - 0.0003 20.9 0.0 0.96 9.6 0.0 2.7 2 0 0 2 2 2 2 Glycosyl transferases group 1 Peripla_BP_4 PF13407.1 gi|21228310|ref|NP_634232.1| - 0.052 12.8 0.3 11 5.2 0.2 2.6 2 1 0 2 2 2 0 Periplasmic binding protein domain TrkA_N PF02254.13 gi|21228311|ref|NP_634233.1| - 5.3e-24 84.4 0.1 1.4e-23 83.0 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain DHH PF01368.15 gi|21228311|ref|NP_634233.1| - 1.4e-16 60.4 1.1 2.8e-15 56.2 0.1 2.3 2 0 0 2 2 2 1 DHH family DHHA1 PF02272.14 gi|21228311|ref|NP_634233.1| - 7.9e-12 44.6 0.1 2.1e-11 43.3 0.1 1.8 1 0 0 1 1 1 1 DHHA1 domain Methyltransf_31 PF13847.1 gi|21228311|ref|NP_634233.1| - 0.00013 21.5 0.1 0.00026 20.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain NAD_Gly3P_dh_N PF01210.18 gi|21228311|ref|NP_634233.1| - 0.00035 20.3 0.0 0.0007 19.3 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.11 gi|21228311|ref|NP_634233.1| - 0.0006 19.2 0.0 0.0012 18.3 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|21228311|ref|NP_634233.1| - 0.00079 19.8 0.0 0.0021 18.4 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.1 gi|21228311|ref|NP_634233.1| - 0.0027 17.7 0.0 0.0058 16.6 0.0 1.5 1 0 0 1 1 1 1 NADH(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|21228311|ref|NP_634233.1| - 0.0033 16.8 0.0 0.0063 15.9 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Saccharop_dh PF03435.13 gi|21228311|ref|NP_634233.1| - 0.016 14.1 0.0 0.028 13.4 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NAD_binding_7 PF13241.1 gi|21228311|ref|NP_634233.1| - 0.026 14.7 0.0 0.067 13.4 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding Pyr_redox_2 PF07992.9 gi|21228311|ref|NP_634233.1| - 0.03 14.1 0.0 0.089 12.6 0.0 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.15 gi|21228311|ref|NP_634233.1| - 0.031 14.3 0.0 0.064 13.3 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Methyltransf_18 PF12847.2 gi|21228311|ref|NP_634233.1| - 0.04 14.5 0.0 0.082 13.4 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Polysacc_synt_2 PF02719.10 gi|21228311|ref|NP_634233.1| - 0.067 12.0 0.1 0.17 10.7 0.0 1.7 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein FAD_binding_3 PF01494.14 gi|21228311|ref|NP_634233.1| - 0.074 12.0 0.0 0.17 10.9 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain ADH_zinc_N PF00107.21 gi|21228311|ref|NP_634233.1| - 0.096 12.2 0.0 0.49 9.9 0.0 2.2 2 0 0 2 2 2 0 Zinc-binding dehydrogenase CPSase_L_chain PF00289.17 gi|21228311|ref|NP_634233.1| - 0.098 12.7 0.0 0.31 11.1 0.0 1.8 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain STT3 PF02516.9 gi|21228312|ref|NP_634234.1| - 2.8e-26 92.5 44.1 2.4e-25 89.4 30.6 2.3 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.1 gi|21228312|ref|NP_634234.1| - 2.2e-08 34.1 1.5 2.2e-08 34.1 1.0 5.0 3 1 1 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Acyl_transf_3 PF01757.17 gi|21228314|ref|NP_634236.1| - 2.3e-31 108.8 52.3 3.1e-31 108.4 36.2 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.7 gi|21228314|ref|NP_634236.1| - 2.6e-05 23.6 26.3 8.4e-05 22.0 12.9 3.2 1 1 0 2 2 2 2 Protein of unknown function (DUF1624) Methyltransf_11 PF08241.7 gi|21228315|ref|NP_634237.1| - 2.1e-28 98.6 0.0 6.1e-21 74.7 0.0 3.5 2 1 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228315|ref|NP_634237.1| - 3.7e-28 98.0 5.0 4.1e-24 84.8 0.2 3.7 2 2 1 3 3 3 2 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228315|ref|NP_634237.1| - 6.8e-24 84.4 0.1 6.8e-16 58.3 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Glycos_transf_2 PF00535.21 gi|21228315|ref|NP_634237.1| - 2e-16 60.1 0.3 8.6e-16 58.0 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferase family 2 Methyltransf_12 PF08242.7 gi|21228315|ref|NP_634237.1| - 2.3e-14 53.6 0.6 3.6e-11 43.3 0.0 3.8 4 0 0 4 4 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228315|ref|NP_634237.1| - 3.6e-14 53.3 0.1 4.5e-12 46.5 0.0 2.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228315|ref|NP_634237.1| - 3.5e-11 43.3 0.0 2.7e-10 40.5 0.0 2.6 2 0 0 2 2 1 1 Methyltransferase domain Glycos_transf_1 PF00534.15 gi|21228315|ref|NP_634237.1| - 5.6e-11 42.1 0.0 2.8e-10 39.8 0.0 2.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Methyltransf_26 PF13659.1 gi|21228315|ref|NP_634237.1| - 1.3e-08 34.8 0.0 6e-07 29.5 0.0 2.6 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|21228315|ref|NP_634237.1| - 1.7e-08 34.0 0.0 9.4e-07 28.3 0.0 2.8 3 0 0 3 3 3 1 Methyltransferase small domain CMAS PF02353.15 gi|21228315|ref|NP_634237.1| - 9.3e-08 31.4 0.1 3.5e-07 29.5 0.1 2.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|21228315|ref|NP_634237.1| - 2e-07 30.3 0.0 5.5e-05 22.3 0.0 2.8 3 0 0 3 3 3 1 ubiE/COQ5 methyltransferase family Glyco_tranf_2_3 PF13641.1 gi|21228315|ref|NP_634237.1| - 4.1e-07 30.0 0.0 8.6e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_1_4 PF13692.1 gi|21228315|ref|NP_634237.1| - 5.1e-06 26.6 0.0 1.1e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_21 PF13506.1 gi|21228315|ref|NP_634237.1| - 4.5e-05 22.8 0.0 7.9e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.1 gi|21228315|ref|NP_634237.1| - 6.4e-05 22.7 0.0 0.00012 21.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 TehB PF03848.9 gi|21228315|ref|NP_634237.1| - 8.6e-05 21.7 0.0 8.6e-05 21.7 0.0 1.9 2 0 0 2 2 1 1 Tellurite resistance protein TehB MetW PF07021.7 gi|21228315|ref|NP_634237.1| - 0.00033 20.0 0.1 0.0059 16.0 0.0 2.6 3 0 0 3 3 3 1 Methionine biosynthesis protein MetW PrmA PF06325.8 gi|21228315|ref|NP_634237.1| - 0.00045 19.4 0.0 0.0014 17.8 0.0 1.8 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TPMT PF05724.6 gi|21228315|ref|NP_634237.1| - 0.0011 18.4 0.0 0.0043 16.5 0.0 1.9 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Reo_sigmaC PF04582.7 gi|21228315|ref|NP_634237.1| - 0.0019 17.4 0.1 0.0043 16.2 0.1 1.5 1 0 0 1 1 1 1 Reovirus sigma C capsid protein RrnaAD PF00398.15 gi|21228315|ref|NP_634237.1| - 0.0029 16.6 0.0 0.0059 15.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase IncA PF04156.9 gi|21228315|ref|NP_634237.1| - 0.003 17.1 5.1 0.0094 15.5 3.5 1.8 1 0 0 1 1 1 1 IncA protein Laminin_I PF06008.9 gi|21228315|ref|NP_634237.1| - 0.0057 16.0 2.0 0.015 14.6 1.4 1.7 1 0 0 1 1 1 1 Laminin Domain I Laminin_II PF06009.7 gi|21228315|ref|NP_634237.1| - 0.0099 15.6 0.5 0.0099 15.6 0.3 1.9 2 0 0 2 2 1 1 Laminin Domain II FlaC_arch PF05377.6 gi|21228315|ref|NP_634237.1| - 0.27 11.1 9.4 0.036 13.9 1.5 3.0 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF3086 PF11285.3 gi|21228315|ref|NP_634237.1| - 0.31 9.8 3.3 2.3 6.9 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3086) DUF4337 PF14235.1 gi|21228315|ref|NP_634237.1| - 0.52 10.1 2.7 1.7 8.4 1.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) ATG16 PF08614.6 gi|21228315|ref|NP_634237.1| - 1.6 8.5 10.3 0.067 12.9 2.3 2.2 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Tropomyosin_1 PF12718.2 gi|21228315|ref|NP_634237.1| - 4.9 6.9 17.6 0.3 10.9 5.5 3.0 2 1 0 2 2 1 0 Tropomyosin like ABC_tran PF00005.22 gi|21228316|ref|NP_634238.1| - 4.6e-22 78.8 0.0 1.8e-21 76.8 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228316|ref|NP_634238.1| - 4.6e-12 46.5 6.2 1.1e-09 38.7 1.1 3.3 2 1 0 2 2 2 1 AAA domain Hexapep PF00132.19 gi|21228316|ref|NP_634238.1| - 2.4e-10 39.4 12.6 1e-08 34.3 5.3 3.0 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21228316|ref|NP_634238.1| - 7.8e-09 34.9 11.6 1e-08 34.5 4.9 2.7 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase AAA_29 PF13555.1 gi|21228316|ref|NP_634238.1| - 3e-06 26.6 0.0 6.5e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|21228316|ref|NP_634238.1| - 0.00095 19.5 6.0 0.0023 18.2 2.1 2.7 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|21228316|ref|NP_634238.1| - 0.0022 17.2 0.3 0.011 14.9 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_17 PF13207.1 gi|21228316|ref|NP_634238.1| - 0.0047 17.7 0.1 0.016 16.0 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|21228316|ref|NP_634238.1| - 0.0096 15.0 0.2 0.0096 15.0 0.1 3.3 4 1 1 5 5 5 1 AAA ATPase domain FBA_2 PF07735.12 gi|21228316|ref|NP_634238.1| - 0.0099 15.7 3.0 0.95 9.3 0.4 2.5 2 0 0 2 2 2 1 F-box associated AAA_30 PF13604.1 gi|21228316|ref|NP_634238.1| - 0.0099 15.4 0.0 0.12 11.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain MobB PF03205.9 gi|21228316|ref|NP_634238.1| - 0.011 15.3 0.3 0.049 13.3 0.1 2.1 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.12 gi|21228316|ref|NP_634238.1| - 0.037 13.8 0.7 0.23 11.2 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function DUF87 AAA_16 PF13191.1 gi|21228316|ref|NP_634238.1| - 0.041 13.8 0.0 0.23 11.4 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain DUF258 PF03193.11 gi|21228316|ref|NP_634238.1| - 0.042 13.0 0.0 0.092 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF258 NTPase_1 PF03266.10 gi|21228316|ref|NP_634238.1| - 0.057 13.1 0.1 7.3 6.2 0.1 2.5 2 0 0 2 2 2 0 NTPase AAA_10 PF12846.2 gi|21228316|ref|NP_634238.1| - 0.15 11.4 0.3 1.2 8.4 0.0 2.0 2 0 0 2 2 2 0 AAA-like domain AAA_18 PF13238.1 gi|21228316|ref|NP_634238.1| - 0.26 11.6 2.7 0.34 11.2 0.2 2.6 2 1 0 2 2 2 0 AAA domain ABC2_membrane PF01061.19 gi|21228317|ref|NP_634239.1| - 1.3e-23 83.3 29.4 1.3e-23 83.3 20.4 1.3 2 0 0 2 2 2 1 ABC-2 type transporter NTP_transferase PF00483.18 gi|21228318|ref|NP_634240.1| - 2.4e-57 194.1 0.0 2.7e-57 193.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|21228318|ref|NP_634240.1| - 1.3e-11 44.8 0.0 1.4e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|21228318|ref|NP_634240.1| - 0.026 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase Glycos_transf_2 PF00535.21 gi|21228319|ref|NP_634241.1| - 2.8e-27 95.4 0.5 5.4e-27 94.5 0.1 1.6 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21228319|ref|NP_634241.1| - 9.1e-14 51.8 0.0 1.4e-13 51.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|21228319|ref|NP_634241.1| - 1.9e-06 27.3 0.5 1.7e-05 24.1 0.0 2.5 1 1 1 2 2 2 1 Glycosyltransferase like family Glyco_tranf_2_2 PF10111.4 gi|21228319|ref|NP_634241.1| - 0.0001 21.4 0.2 0.01 14.9 0.0 2.0 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21228319|ref|NP_634241.1| - 0.0023 17.6 0.0 0.0032 17.2 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.1 gi|21228319|ref|NP_634241.1| - 0.035 14.4 0.0 0.082 13.2 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|21228320|ref|NP_634242.1| - 1e-45 155.2 0.5 2e-45 154.2 0.2 1.6 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21228320|ref|NP_634242.1| - 2e-18 66.8 0.0 3.4e-18 66.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|21228320|ref|NP_634242.1| - 1.5e-11 44.2 2.9 1.5e-10 41.0 0.7 2.3 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|21228320|ref|NP_634242.1| - 7.1e-11 42.1 0.0 1.3e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|21228320|ref|NP_634242.1| - 7.5e-10 38.9 0.0 1.7e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21228320|ref|NP_634242.1| - 3.3e-05 24.0 0.0 5.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.6 gi|21228320|ref|NP_634242.1| - 0.00042 19.8 0.0 0.86 9.0 0.0 2.5 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF3880 PF12996.2 gi|21228320|ref|NP_634242.1| - 0.062 13.2 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) Methyltransf_11 PF08241.7 gi|21228321|ref|NP_634243.1| - 2.5e-21 75.9 0.0 3.5e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228321|ref|NP_634243.1| - 1e-19 70.5 0.0 1.2e-19 70.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228321|ref|NP_634243.1| - 5.7e-19 68.4 0.0 7.1e-19 68.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21228321|ref|NP_634243.1| - 1.1e-13 51.0 0.0 1.4e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.7 gi|21228321|ref|NP_634243.1| - 8.3e-13 48.6 0.0 1.4e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228321|ref|NP_634243.1| - 8.2e-12 45.3 0.0 1.6e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228321|ref|NP_634243.1| - 4.6e-09 36.8 0.0 6.5e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228321|ref|NP_634243.1| - 9.8e-05 21.5 0.0 0.00014 21.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.10 gi|21228321|ref|NP_634243.1| - 0.0001 21.9 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_26 PF13659.1 gi|21228321|ref|NP_634243.1| - 0.00015 21.7 0.0 0.00027 20.9 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|21228321|ref|NP_634243.1| - 0.0002 20.8 0.0 0.00027 20.4 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.9 gi|21228321|ref|NP_634243.1| - 0.00029 20.2 0.0 0.00043 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|21228321|ref|NP_634243.1| - 0.00064 18.9 0.0 0.00082 18.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.1 gi|21228321|ref|NP_634243.1| - 0.046 13.3 0.0 0.068 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.8 gi|21228321|ref|NP_634243.1| - 0.052 13.6 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.7 gi|21228321|ref|NP_634243.1| - 0.059 12.2 0.0 0.068 12.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase UPF0104 PF03706.8 gi|21228322|ref|NP_634244.1| - 8.4e-38 130.3 15.1 9.8e-38 130.0 10.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Glycos_transf_2 PF00535.21 gi|21228323|ref|NP_634245.1| - 1.6e-32 112.5 0.6 2.3e-32 111.9 0.4 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21228323|ref|NP_634245.1| - 3.1e-12 46.7 0.0 4.3e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|21228323|ref|NP_634245.1| - 9.4e-08 31.4 0.2 1.3e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|21228323|ref|NP_634245.1| - 0.11 12.8 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.15 gi|21228324|ref|NP_634246.1| - 1.5e-33 115.6 1.1 2.3e-33 115.0 0.7 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21228324|ref|NP_634246.1| - 1.6e-19 70.3 0.0 3.4e-19 69.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21228324|ref|NP_634246.1| - 5.2e-16 58.8 0.0 9.2e-16 58.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.1 gi|21228324|ref|NP_634246.1| - 8.6e-11 42.2 0.0 1.3e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|21228324|ref|NP_634246.1| - 6.9e-08 32.6 0.0 1.6e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.14 gi|21228324|ref|NP_634246.1| - 0.019 13.7 0.0 0.023 13.4 0.0 1.2 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_2 PF00535.21 gi|21228325|ref|NP_634247.1| - 5.5e-21 74.9 0.0 8.1e-21 74.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21228325|ref|NP_634247.1| - 7.2e-06 25.9 0.0 1e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|21228325|ref|NP_634247.1| - 0.0016 17.7 0.0 0.0031 16.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|21228325|ref|NP_634247.1| - 0.0057 15.7 0.0 0.0088 15.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Borrelia_P13 PF05628.7 gi|21228325|ref|NP_634247.1| - 0.57 9.9 4.6 2.2 8.0 1.0 2.5 2 0 0 2 2 2 0 Borrelia membrane protein P13 FMN_red PF03358.10 gi|21228326|ref|NP_634248.1| - 9.2e-15 54.4 0.1 1.4e-14 53.8 0.1 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21228326|ref|NP_634248.1| - 0.0058 16.1 0.0 0.008 15.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.20 gi|21228326|ref|NP_634248.1| - 0.054 13.5 0.1 1.7 8.6 0.0 2.3 1 1 1 2 2 2 0 Flavodoxin Glyco_transf_36 PF06165.6 gi|21228327|ref|NP_634249.1| - 0.00042 20.1 0.1 0.00086 19.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 36 Glyco_hydro_15 PF00723.16 gi|21228327|ref|NP_634249.1| - 0.011 14.2 0.0 0.041 12.4 0.0 1.8 2 0 0 2 2 2 0 Glycosyl hydrolases family 15 Glyco_hydro_15 PF00723.16 gi|21228328|ref|NP_634250.1| - 2.8e-09 36.0 0.0 3.8e-07 29.0 0.0 2.2 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 DUF608 PF04685.8 gi|21228328|ref|NP_634250.1| - 0.00036 19.3 0.0 0.0005 18.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF608 Acetyltransf_7 PF13508.1 gi|21228329|ref|NP_634251.1| - 1.8e-11 44.0 0.1 2.5e-11 43.5 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228329|ref|NP_634251.1| - 1.9e-11 43.8 0.1 2.7e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 gi|21228329|ref|NP_634251.1| - 3.7e-07 30.1 0.0 4.8e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21228329|ref|NP_634251.1| - 4.8e-06 26.6 0.0 5.4e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21228329|ref|NP_634251.1| - 5.1e-06 26.5 0.0 6e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21228329|ref|NP_634251.1| - 0.00027 20.7 0.0 0.00044 20.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.1 gi|21228329|ref|NP_634251.1| - 0.00048 20.3 0.0 0.00057 20.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21228329|ref|NP_634251.1| - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_5 PF13444.1 gi|21228329|ref|NP_634251.1| - 0.11 13.0 0.0 0.22 12.0 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Peptidase_M20 PF01546.23 gi|21228330|ref|NP_634252.1| - 2.3e-22 79.4 0.1 3.8e-22 78.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|21228330|ref|NP_634252.1| - 4.4e-08 32.8 0.0 9e-08 31.8 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain NTP_transf_2 PF01909.18 gi|21228331|ref|NP_634253.1| - 0.0002 21.6 0.0 0.00059 20.1 0.0 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain MdcG PF10620.4 gi|21228331|ref|NP_634253.1| - 0.079 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG DDE_3 PF13358.1 gi|21228332|ref|NP_634254.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease DDE_Tnp_1_2 PF13586.1 gi|21228333|ref|NP_634255.1| - 6e-18 64.8 2.3 8.8e-18 64.2 1.6 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|21228333|ref|NP_634255.1| - 1e-17 64.4 2.3 2.3e-17 63.2 1.6 1.5 1 1 0 1 1 1 1 Transposase DDE domain DUF4096 PF13340.1 gi|21228333|ref|NP_634255.1| - 8e-15 54.4 0.2 2.6e-14 52.7 0.1 1.9 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) HTH_29 PF13551.1 gi|21228334|ref|NP_634256.1| - 2.9e-08 33.8 0.0 9.5e-08 32.1 0.0 1.7 1 1 1 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.1 gi|21228334|ref|NP_634256.1| - 2.5e-07 30.1 0.0 4.6e-07 29.2 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain TFX_C PF14601.1 gi|21228334|ref|NP_634256.1| - 0.0085 15.8 0.2 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term GerE PF00196.14 gi|21228334|ref|NP_634256.1| - 0.083 12.2 0.2 0.23 10.8 0.1 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21228334|ref|NP_634256.1| - 0.11 12.1 0.3 0.24 11.1 0.2 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB PKD PF00801.15 gi|21228335|ref|NP_634257.1| - 1e-10 41.1 1.8 1e-10 41.1 1.2 2.1 2 0 0 2 2 2 1 PKD domain NPCBM_assoc PF10633.4 gi|21228335|ref|NP_634257.1| - 0.0011 18.9 3.2 0.96 9.5 0.0 2.9 2 1 1 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4139 PF13598.1 gi|21228336|ref|NP_634258.1| - 1.9e-07 30.7 5.3 1.4e-05 24.5 0.9 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4139) DUF4140 PF13600.1 gi|21228336|ref|NP_634258.1| - 0.00015 22.1 0.4 0.00051 20.4 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) LSM PF01423.17 gi|21228336|ref|NP_634258.1| - 0.00063 19.2 0.1 0.0016 17.9 0.0 1.7 1 0 0 1 1 1 1 LSM domain CMD PF02627.15 gi|21228338|ref|NP_634260.1| - 2.8e-22 78.3 0.1 3.6e-22 77.9 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family FlhD PF05247.8 gi|21228338|ref|NP_634260.1| - 0.013 15.4 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) HTH_5 PF01022.15 gi|21228339|ref|NP_634261.1| - 4.8e-14 51.7 0.2 7.8e-14 51.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21228339|ref|NP_634261.1| - 5.8e-06 26.0 0.0 7.8e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DDE_Tnp_IS1 PF03400.8 gi|21228340|ref|NP_634262.1| - 6e-06 26.3 0.0 8.8e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 IS1 transposase rve_3 PF13683.1 gi|21228340|ref|NP_634262.1| - 0.00022 20.7 0.1 0.00045 19.6 0.0 1.6 1 1 0 1 1 1 1 Integrase core domain DUF2309 PF10070.4 gi|21228340|ref|NP_634262.1| - 0.078 11.0 0.0 0.082 10.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) HTH_38 PF13936.1 gi|21228341|ref|NP_634263.1| - 0.014 14.9 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|21228341|ref|NP_634263.1| - 0.054 13.1 0.0 0.097 12.3 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Thioredoxin PF00085.15 gi|21228342|ref|NP_634264.1| - 8.2e-07 28.6 0.0 1.4e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin DIM1 PF02966.11 gi|21228342|ref|NP_634264.1| - 0.00045 19.7 0.0 0.00062 19.2 0.0 1.3 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_3 PF13192.1 gi|21228342|ref|NP_634264.1| - 0.00074 19.2 0.2 0.015 15.1 0.1 2.2 2 0 0 2 2 2 1 Thioredoxin domain HyaE PF07449.6 gi|21228342|ref|NP_634264.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.1 gi|21228342|ref|NP_634264.1| - 0.12 12.2 0.0 0.34 10.7 0.0 1.7 2 0 0 2 2 2 0 Thioredoxin-like domain DsbD PF02683.10 gi|21228343|ref|NP_634265.1| - 2.1e-38 132.0 25.5 2.4e-38 131.8 17.6 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|21228343|ref|NP_634265.1| - 4.8e-15 55.8 23.0 6.2e-15 55.4 15.9 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region NADH-u_ox-rdase PF10785.4 gi|21228343|ref|NP_634265.1| - 0.085 13.1 1.5 0.19 12.0 0.1 2.3 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit Pox_P21 PF05313.7 gi|21228343|ref|NP_634265.1| - 1.3 8.2 12.0 0.16 11.2 1.0 2.3 2 1 0 2 2 2 0 Poxvirus P21 membrane protein HTH_5 PF01022.15 gi|21228344|ref|NP_634266.1| - 1.9e-14 53.0 0.1 3.9e-14 52.0 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21228344|ref|NP_634266.1| - 4.3e-12 45.6 0.0 6e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|21228344|ref|NP_634266.1| - 0.00084 19.4 0.2 0.0019 18.2 0.1 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_34 PF13601.1 gi|21228344|ref|NP_634266.1| - 0.00092 19.2 0.1 0.0014 18.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|21228344|ref|NP_634266.1| - 0.0013 18.8 0.1 0.0026 17.8 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21228344|ref|NP_634266.1| - 0.0045 16.3 0.0 0.43 9.9 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21228344|ref|NP_634266.1| - 0.034 14.4 0.0 0.086 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain TrmB PF01978.14 gi|21228344|ref|NP_634266.1| - 0.058 13.1 0.0 0.097 12.3 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Baculo_IE-1 PF05290.6 gi|21228344|ref|NP_634266.1| - 0.067 12.9 2.6 0.07 12.8 0.6 1.8 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) Cys_rich_CPCC PF14206.1 gi|21228344|ref|NP_634266.1| - 2.9 7.4 6.4 0.45 10.1 1.8 1.7 2 0 0 2 2 2 0 Cysteine-rich CPCC zf-RING_4 PF14570.1 gi|21228344|ref|NP_634266.1| - 6.9 6.3 8.1 12 5.6 2.6 2.6 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain Methyltransf_31 PF13847.1 gi|21228345|ref|NP_634267.1| - 8.5e-43 145.5 0.0 1.2e-42 145.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21228345|ref|NP_634267.1| - 2.2e-24 85.7 0.0 5.5e-24 84.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228345|ref|NP_634267.1| - 1.2e-19 70.3 0.0 2.1e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|21228345|ref|NP_634267.1| - 1.1e-16 61.4 0.0 2.4e-16 60.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228345|ref|NP_634267.1| - 4.1e-16 59.1 0.0 1.2e-15 57.6 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228345|ref|NP_634267.1| - 3.9e-15 55.9 0.0 5.2e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21228345|ref|NP_634267.1| - 1.5e-13 50.8 0.0 9.3e-13 48.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228345|ref|NP_634267.1| - 1.9e-12 47.4 0.0 3.4e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21228345|ref|NP_634267.1| - 6.1e-12 45.5 0.0 8.7e-12 45.0 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.9 gi|21228345|ref|NP_634267.1| - 1.6e-09 37.4 0.0 2.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.13 gi|21228345|ref|NP_634267.1| - 1.1e-07 31.6 0.0 1.6e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.8 gi|21228345|ref|NP_634267.1| - 2.3e-06 26.9 0.0 3.4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.10 gi|21228345|ref|NP_634267.1| - 7.3e-06 25.7 0.2 2e-05 24.3 0.1 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_15 PF09445.5 gi|21228345|ref|NP_634267.1| - 3e-05 23.6 0.1 4.3e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.15 gi|21228345|ref|NP_634267.1| - 3.9e-05 22.8 0.0 6.3e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.1 gi|21228345|ref|NP_634267.1| - 0.00011 21.8 0.0 0.0002 21.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|21228345|ref|NP_634267.1| - 0.0031 16.6 0.0 0.012 14.6 0.0 1.8 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_3 PF01596.12 gi|21228345|ref|NP_634267.1| - 0.0091 15.0 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase CheR PF01739.13 gi|21228345|ref|NP_634267.1| - 0.043 13.0 0.1 0.47 9.7 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain DOT1 PF08123.8 gi|21228345|ref|NP_634267.1| - 0.056 12.7 0.0 0.08 12.2 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 FtsJ PF01728.14 gi|21228345|ref|NP_634267.1| - 0.087 12.8 0.0 0.15 12.0 0.0 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase GidB PF02527.10 gi|21228345|ref|NP_634267.1| - 0.12 11.5 0.1 0.3 10.1 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G LMWPc PF01451.16 gi|21228346|ref|NP_634268.1| - 2e-15 57.3 0.0 2.3e-15 57.1 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase zf-Sec23_Sec24 PF04810.10 gi|21228346|ref|NP_634268.1| - 0.074 12.6 0.1 0.074 12.6 0.1 1.5 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger DUF318 PF03773.8 gi|21228347|ref|NP_634269.1| - 1.7e-59 201.3 26.0 3.4e-59 200.3 18.0 1.4 1 1 0 1 1 1 1 Predicted permease HTH_5 PF01022.15 gi|21228348|ref|NP_634270.1| - 1.5e-19 69.3 1.4 3.1e-19 68.3 1.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21228348|ref|NP_634270.1| - 7e-17 60.9 0.1 1.1e-16 60.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|21228348|ref|NP_634270.1| - 0.00012 21.6 0.0 0.00037 20.1 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|21228348|ref|NP_634270.1| - 0.0054 16.7 0.2 0.013 15.4 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21228348|ref|NP_634270.1| - 0.013 15.1 0.2 0.025 14.2 0.1 1.6 1 1 0 1 1 1 0 MarR family PaaX PF07848.7 gi|21228348|ref|NP_634270.1| - 0.018 14.9 0.0 0.036 14.0 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein DUF2250 PF10007.4 gi|21228348|ref|NP_634270.1| - 0.056 13.3 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_Crp_2 PF13545.1 gi|21228348|ref|NP_634270.1| - 0.086 12.6 0.0 0.44 10.3 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|21228348|ref|NP_634270.1| - 0.099 12.0 0.1 0.55 9.6 0.1 2.2 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|21228349|ref|NP_634271.1| - 4.6e-12 45.4 0.2 1.5e-08 34.1 0.0 2.8 2 1 1 3 3 3 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21228349|ref|NP_634271.1| - 1.3e-11 44.1 0.0 2.5e-11 43.2 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.1 gi|21228349|ref|NP_634271.1| - 0.00089 19.2 0.0 0.0018 18.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_CodY PF08222.6 gi|21228349|ref|NP_634271.1| - 0.0016 17.7 0.4 0.0073 15.6 0.0 2.0 2 0 0 2 2 2 1 CodY helix-turn-helix domain TrmB PF01978.14 gi|21228349|ref|NP_634271.1| - 0.014 15.1 0.1 0.071 12.8 0.0 2.2 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB Cdc6_C PF09079.6 gi|21228349|ref|NP_634271.1| - 0.035 13.8 0.1 0.066 12.9 0.0 1.6 2 0 0 2 2 2 0 CDC6, C terminal Arg_repressor PF01316.16 gi|21228349|ref|NP_634271.1| - 0.061 12.8 0.6 0.31 10.6 0.3 2.2 1 1 0 1 1 1 0 Arginine repressor, DNA binding domain DUF318 PF03773.8 gi|21228350|ref|NP_634272.1| - 3.5e-69 233.1 22.5 4e-69 232.9 15.6 1.0 1 0 0 1 1 1 1 Predicted permease DUF3937 PF13073.1 gi|21228350|ref|NP_634272.1| - 0.11 12.4 0.3 0.11 12.4 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF3937) Thioredoxin_3 PF13192.1 gi|21228351|ref|NP_634273.1| - 6.9e-29 99.4 3.9 7.5e-29 99.3 2.7 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|21228351|ref|NP_634273.1| - 3e-08 33.5 0.9 5.1e-08 32.7 0.6 1.4 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.1 gi|21228351|ref|NP_634273.1| - 0.0032 17.6 0.9 0.2 11.8 0.6 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.1 gi|21228351|ref|NP_634273.1| - 0.0034 17.4 0.9 0.56 10.2 0.3 2.0 1 1 1 2 2 2 2 Thioredoxin ArsD PF06953.6 gi|21228351|ref|NP_634273.1| - 0.0055 16.8 0.1 0.013 15.6 0.0 1.5 1 1 1 2 2 2 1 Arsenical resistance operon trans-acting repressor ArsD DUF836 PF05768.9 gi|21228351|ref|NP_634273.1| - 0.0072 16.5 0.0 0.0078 16.4 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DUF953 PF06110.6 gi|21228351|ref|NP_634273.1| - 0.013 14.9 0.1 0.014 14.8 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Tox-PL-2 PF15643.1 gi|21228351|ref|NP_634273.1| - 0.066 13.1 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Papain fold toxin 2 DUF1525 PF07511.6 gi|21228351|ref|NP_634273.1| - 0.069 13.1 0.1 0.075 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) BON PF04972.12 gi|21228351|ref|NP_634273.1| - 0.081 12.6 0.2 0.47 10.2 0.0 2.0 2 0 0 2 2 2 0 BON domain DUF1335 PF07056.6 gi|21228351|ref|NP_634273.1| - 0.11 12.1 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) MtrA PF04208.9 gi|21228353|ref|NP_634275.1| - 2.2e-49 167.2 0.0 2.4e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A ZZ PF00569.12 gi|21228353|ref|NP_634275.1| - 0.11 12.0 0.1 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type Disaggr_assoc PF08480.5 gi|21228354|ref|NP_634276.1| - 4e-89 297.2 9.8 4e-89 297.2 6.8 3.2 2 1 0 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|21228354|ref|NP_634276.1| - 1.2e-15 57.6 48.8 1.5e-10 41.0 16.4 3.9 1 1 2 3 3 3 3 Right handed beta helix region Hydantoinase_A PF01968.13 gi|21228355|ref|NP_634277.1| - 1.1e-83 280.6 1.6 3.7e-83 278.9 0.0 2.1 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21228355|ref|NP_634277.1| - 5e-39 133.6 0.3 2.9e-36 124.5 0.0 2.6 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21228355|ref|NP_634277.1| - 4.7e-05 21.9 0.6 0.062 11.6 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21228355|ref|NP_634277.1| - 0.056 12.7 0.1 0.62 9.3 0.0 2.5 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family DUF1212 PF06738.7 gi|21228357|ref|NP_634279.1| - 0.24 10.8 2.5 0.31 10.4 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) Methyltransf_12 PF08242.7 gi|21228358|ref|NP_634280.1| - 3.2e-13 49.9 0.0 5.2e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228358|ref|NP_634280.1| - 3.4e-12 46.2 0.1 4.2e-12 45.9 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228358|ref|NP_634280.1| - 4.2e-12 46.0 0.0 6.4e-12 45.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21228358|ref|NP_634280.1| - 6.2e-12 45.1 0.3 1.3e-11 44.1 0.2 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.7 gi|21228358|ref|NP_634280.1| - 1.2e-10 41.6 0.0 2.1e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228358|ref|NP_634280.1| - 3.2e-10 40.5 0.0 5.3e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228358|ref|NP_634280.1| - 1.1e-07 32.1 0.0 2.4e-07 31.0 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228358|ref|NP_634280.1| - 1.2e-07 31.1 0.0 1.7e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.9 gi|21228358|ref|NP_634280.1| - 2.5e-07 30.2 0.0 4.5e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|21228358|ref|NP_634280.1| - 0.00028 20.1 0.0 0.00037 19.7 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.8 gi|21228358|ref|NP_634280.1| - 0.0018 17.4 0.0 0.0024 17.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.14 gi|21228358|ref|NP_634280.1| - 0.0025 17.3 0.0 0.004 16.7 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.12 gi|21228358|ref|NP_634280.1| - 0.0025 16.8 0.0 0.005 15.9 0.0 1.5 2 0 0 2 2 2 1 Putative methyltransferase NodS PF05401.6 gi|21228358|ref|NP_634280.1| - 0.0096 15.3 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Pox_MCEL PF03291.11 gi|21228358|ref|NP_634280.1| - 0.017 13.9 0.4 0.041 12.7 0.0 1.9 2 1 0 2 2 2 0 mRNA capping enzyme B5 PF03484.10 gi|21228358|ref|NP_634280.1| - 0.025 14.3 0.0 0.4 10.5 0.0 2.6 2 1 1 3 3 3 0 tRNA synthetase B5 domain Methyltransf_26 PF13659.1 gi|21228358|ref|NP_634280.1| - 0.029 14.4 0.0 0.076 13.0 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain TPMT PF05724.6 gi|21228358|ref|NP_634280.1| - 0.056 12.8 0.0 0.087 12.2 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DsrH PF04077.7 gi|21228360|ref|NP_634282.1| - 9.3e-06 25.2 0.0 1.4e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 DsrH like protein DrsE PF02635.10 gi|21228361|ref|NP_634283.1| - 2.2e-11 43.8 0.0 2.4e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.7 gi|21228361|ref|NP_634283.1| - 0.0041 16.7 0.0 0.011 15.3 0.0 1.7 1 1 0 1 1 1 1 DsrH like protein DrsE PF02635.10 gi|21228362|ref|NP_634284.1| - 2.2e-19 69.7 0.0 2.5e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family FTCD_N PF07837.7 gi|21228362|ref|NP_634284.1| - 0.018 14.5 0.0 0.022 14.2 0.0 1.2 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain FeS PF04060.8 gi|21228363|ref|NP_634285.1| - 2.6e-12 46.1 1.5 2.6e-12 46.1 1.1 2.1 3 0 0 3 3 3 1 Putative Fe-S cluster HTH_20 PF12840.2 gi|21228363|ref|NP_634285.1| - 3.7e-08 33.0 0.0 3.8e-07 29.8 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|21228363|ref|NP_634285.1| - 1.9e-06 27.4 0.0 6.6e-06 25.7 0.0 1.9 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family TBP PF00352.16 gi|21228363|ref|NP_634285.1| - 0.0053 16.0 0.2 0.018 14.3 0.0 2.0 3 0 0 3 3 3 1 Transcription factor TFIID (or TATA-binding protein, TBP) YhfH PF14149.1 gi|21228363|ref|NP_634285.1| - 0.025 14.3 0.1 0.048 13.4 0.0 1.4 1 0 0 1 1 1 0 YhfH-like protein DUF1900 PF08954.6 gi|21228363|ref|NP_634285.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1900) FeS PF04060.8 gi|21228364|ref|NP_634286.1| - 5.1e-14 51.5 2.3 9.6e-14 50.6 1.6 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster HTH_20 PF12840.2 gi|21228364|ref|NP_634286.1| - 2.7e-05 23.8 0.0 7.1e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TBP PF00352.16 gi|21228364|ref|NP_634286.1| - 0.0068 15.7 0.1 0.018 14.3 0.1 1.7 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) YhfH PF14149.1 gi|21228364|ref|NP_634286.1| - 0.03 14.0 0.5 0.061 13.1 0.4 1.5 1 0 0 1 1 1 0 YhfH-like protein HTH_5 PF01022.15 gi|21228364|ref|NP_634286.1| - 0.051 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family ArsR PF09824.4 gi|21228364|ref|NP_634286.1| - 0.1 11.8 0.2 0.26 10.6 0.0 1.7 2 0 0 2 2 2 0 ArsR transcriptional regulator EspA PF03433.8 gi|21228364|ref|NP_634286.1| - 0.11 11.8 0.0 0.84 9.0 0.0 2.0 2 0 0 2 2 2 0 EspA-like secreted protein Ribosomal_S10 PF00338.17 gi|21228365|ref|NP_634287.1| - 3.3e-30 103.7 0.0 3.6e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|21228366|ref|NP_634288.1| - 5e-59 198.9 0.0 7.5e-59 198.3 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|21228366|ref|NP_634288.1| - 3.8e-29 100.7 0.4 1.1e-28 99.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|21228366|ref|NP_634288.1| - 4.9e-18 65.0 3.0 1.5e-17 63.4 1.4 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|21228366|ref|NP_634288.1| - 1.8e-06 27.9 0.0 5e-06 26.4 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.1 gi|21228366|ref|NP_634288.1| - 5.3e-06 25.9 0.3 1.1e-05 24.9 0.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Miro PF08477.8 gi|21228366|ref|NP_634288.1| - 6.1e-06 26.7 0.0 0.00023 21.6 0.0 2.8 2 1 0 2 2 2 1 Miro-like protein Gtr1_RagA PF04670.7 gi|21228366|ref|NP_634288.1| - 0.001 18.2 0.0 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.18 gi|21228366|ref|NP_634288.1| - 0.012 15.4 0.0 1.3 8.7 0.0 2.3 1 1 0 1 1 1 0 Dynamin family Septin PF00735.13 gi|21228366|ref|NP_634288.1| - 0.052 12.5 0.0 0.12 11.3 0.0 1.5 1 1 0 1 1 1 0 Septin FeoB_N PF02421.13 gi|21228366|ref|NP_634288.1| - 0.12 11.6 0.0 1.4 8.1 0.0 2.5 2 1 0 2 2 2 0 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|21228367|ref|NP_634289.1| - 9.3e-60 201.2 0.3 1.6e-59 200.4 0.2 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|21228367|ref|NP_634289.1| - 7.4e-31 106.2 0.4 1.2e-29 102.2 0.0 2.8 1 1 1 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.19 gi|21228367|ref|NP_634289.1| - 1.6e-24 85.5 0.1 4.9e-24 84.0 0.0 1.9 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.1 gi|21228367|ref|NP_634289.1| - 2.8e-24 84.7 2.5 3.8e-24 84.3 0.9 1.9 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.20 gi|21228367|ref|NP_634289.1| - 1.8e-16 60.0 0.8 7.2e-16 58.0 0.5 2.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|21228367|ref|NP_634289.1| - 5.3e-05 23.1 0.0 0.00014 21.8 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Paramyxo_PCT PF14320.1 gi|21228367|ref|NP_634289.1| - 0.035 13.0 0.1 0.085 11.7 0.0 1.6 2 0 0 2 2 2 0 Phosphoprotein P region PCT disordered Ras PF00071.17 gi|21228367|ref|NP_634289.1| - 0.089 12.1 0.1 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Ras family Ribosomal_S7 PF00177.16 gi|21228368|ref|NP_634290.1| - 1.4e-36 125.2 3.1 1.7e-36 125.0 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.20 gi|21228369|ref|NP_634291.1| - 2.5e-38 130.2 0.1 2.9e-38 130.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.12 gi|21228370|ref|NP_634292.1| - 4.6e-22 77.3 2.8 4.7e-16 58.1 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.1 gi|21228370|ref|NP_634292.1| - 4.6e-16 58.3 0.5 1.9e-14 53.2 0.1 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 gi|21228370|ref|NP_634292.1| - 3.2e-07 29.8 0.4 0.012 15.2 0.1 2.5 3 0 0 3 3 3 2 KH domain KH_4 PF13083.1 gi|21228370|ref|NP_634292.1| - 8.3e-07 28.5 1.8 0.022 14.3 0.0 2.8 2 1 1 3 3 3 2 KH domain KH_3 PF13014.1 gi|21228370|ref|NP_634292.1| - 0.027 14.1 6.0 0.54 9.9 0.3 3.0 3 0 0 3 3 3 0 KH domain Ribosomal_L7Ae PF01248.21 gi|21228371|ref|NP_634293.1| - 3.3e-17 61.7 0.5 4e-17 61.5 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.12 gi|21228372|ref|NP_634294.1| - 1.7e-49 168.5 1.8 2.6e-49 167.9 1.3 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SpoIIP PF07454.6 gi|21228372|ref|NP_634294.1| - 0.056 12.5 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) RNA_pol_Rpb1_1 PF04997.7 gi|21228373|ref|NP_634295.1| - 1e-90 304.4 0.2 4.8e-55 187.1 0.0 2.5 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|21228373|ref|NP_634295.1| - 3.6e-67 225.4 0.1 6e-67 224.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_5 PF04998.12 gi|21228373|ref|NP_634295.1| - 5.8e-31 107.7 0.0 1e-30 106.9 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.12 gi|21228373|ref|NP_634295.1| - 9.1e-31 105.8 0.0 2.2e-30 104.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.13 gi|21228373|ref|NP_634295.1| - 4.2e-29 101.3 0.0 9.1e-29 100.2 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb2_6 PF00562.23 gi|21228374|ref|NP_634296.1| - 6.3e-122 407.0 0.0 8.2e-122 406.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.15 gi|21228374|ref|NP_634296.1| - 9.4e-27 93.0 0.0 2.8e-26 91.5 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.8 gi|21228374|ref|NP_634296.1| - 3e-25 87.8 0.7 6e-25 86.8 0.5 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|21228374|ref|NP_634296.1| - 6.9e-17 61.1 1.8 1.3e-16 60.2 1.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 zf-ribbon_3 PF13248.1 gi|21228374|ref|NP_634296.1| - 0.032 13.4 1.8 0.069 12.3 1.2 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|21228374|ref|NP_634296.1| - 0.077 12.6 0.5 12 5.6 0.1 2.6 2 0 0 2 2 2 0 Nudix N-terminal RNA_pol_Rpb2_45 PF10385.4 gi|21228374|ref|NP_634296.1| - 0.088 12.6 0.2 0.23 11.2 0.1 1.7 1 0 0 1 1 1 0 RNA polymerase beta subunit external 1 domain DUF1451 PF07295.6 gi|21228374|ref|NP_634296.1| - 0.094 12.4 0.6 0.2 11.3 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) zinc_ribbon_2 PF13240.1 gi|21228374|ref|NP_634296.1| - 0.11 12.0 0.4 6.8 6.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|21228374|ref|NP_634296.1| - 0.17 11.7 0.3 0.34 10.7 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon RNA_pol_Rpb2_1 PF04563.10 gi|21228375|ref|NP_634297.1| - 3.8e-56 189.2 1.0 9e-56 188.0 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.9 gi|21228375|ref|NP_634297.1| - 9.5e-30 103.4 0.3 1.5e-29 102.8 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.11 gi|21228375|ref|NP_634297.1| - 1.4e-23 82.3 0.0 2.4e-23 81.6 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 CBS PF00571.23 gi|21228375|ref|NP_634297.1| - 0.085 12.6 0.2 0.68 9.7 0.1 2.4 1 1 0 1 1 1 0 CBS domain RNA_pol_Rpb5_C PF01191.14 gi|21228376|ref|NP_634298.1| - 4.4e-29 99.8 0.1 5.3e-29 99.6 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain MEDS PF14417.1 gi|21228377|ref|NP_634299.1| - 1.9e-83 278.2 0.1 7.3e-83 276.3 0.0 2.1 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PocR PF10114.4 gi|21228377|ref|NP_634299.1| - 5.7e-66 220.9 0.0 1.3e-65 219.7 0.0 1.6 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_3 PF08447.6 gi|21228377|ref|NP_634299.1| - 3.9e-34 116.6 0.9 2.2e-14 53.3 0.0 5.0 5 0 0 5 5 5 3 PAS fold PAS_4 PF08448.5 gi|21228377|ref|NP_634299.1| - 1.1e-31 109.0 0.0 4.8e-14 52.3 0.0 4.2 4 0 0 4 4 4 2 PAS fold HisKA_2 PF07568.7 gi|21228377|ref|NP_634299.1| - 1.1e-30 105.2 1.7 1.1e-30 105.2 1.2 2.7 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.1 gi|21228377|ref|NP_634299.1| - 4.5e-29 100.8 0.1 2.1e-09 37.6 0.0 5.1 5 0 0 5 5 5 4 PAS domain PAS PF00989.19 gi|21228377|ref|NP_634299.1| - 6.4e-15 54.9 0.1 1.2e-05 25.0 0.0 4.6 5 1 0 5 5 5 3 PAS fold PAS_8 PF13188.1 gi|21228377|ref|NP_634299.1| - 4e-14 51.8 0.0 6.8e-05 22.5 0.0 3.9 3 0 0 3 3 3 3 PAS domain HATPase_c PF02518.21 gi|21228377|ref|NP_634299.1| - 8.6e-09 35.1 0.0 2.3e-08 33.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|21228377|ref|NP_634299.1| - 6.6e-05 23.2 1.3 0.081 13.3 0.1 2.9 2 0 0 2 2 2 2 HWE histidine kinase HATPase_c_2 PF13581.1 gi|21228377|ref|NP_634299.1| - 0.0011 18.7 0.0 0.0029 17.4 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF4041 PF13250.1 gi|21228377|ref|NP_634299.1| - 0.036 13.6 0.4 4.5 6.9 0.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4041) MEDS PF14417.1 gi|21228378|ref|NP_634300.1| - 1.8e-83 278.2 0.4 5.4e-83 276.7 0.0 2.1 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.6 gi|21228378|ref|NP_634300.1| - 5.2e-51 170.6 0.0 3.8e-18 65.3 0.0 5.9 5 0 0 5 5 5 4 PAS fold PAS_9 PF13426.1 gi|21228378|ref|NP_634300.1| - 3.2e-48 162.3 0.1 1.5e-15 57.4 0.0 5.9 6 0 0 6 6 6 5 PAS domain PAS_4 PF08448.5 gi|21228378|ref|NP_634300.1| - 5.9e-42 142.1 0.0 6.7e-16 58.3 0.0 4.9 5 0 0 5 5 5 4 PAS fold PAS PF00989.19 gi|21228378|ref|NP_634300.1| - 1.2e-36 124.9 0.1 3.5e-15 55.7 0.0 5.6 5 0 0 5 5 5 4 PAS fold HisKA_2 PF07568.7 gi|21228378|ref|NP_634300.1| - 5e-31 106.3 1.7 2.1e-30 104.3 1.1 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.1 gi|21228378|ref|NP_634300.1| - 9.9e-20 69.6 0.0 9.1e-09 34.8 0.0 4.7 4 0 0 4 4 4 2 PAS domain PAS_10 PF13596.1 gi|21228378|ref|NP_634300.1| - 1.7e-11 44.3 0.0 0.062 13.5 0.0 5.4 5 0 0 5 5 5 3 PAS domain HATPase_c PF02518.21 gi|21228378|ref|NP_634300.1| - 4.6e-10 39.1 0.1 1.1e-09 37.9 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|21228378|ref|NP_634300.1| - 3.4e-06 26.9 0.0 1.3 8.9 0.0 4.4 4 0 0 4 4 4 2 PAS domain PAS_7 PF12860.2 gi|21228378|ref|NP_634300.1| - 0.00011 22.1 0.1 4.7 7.2 0.0 5.3 5 1 0 5 5 4 1 PAS fold HWE_HK PF07536.9 gi|21228378|ref|NP_634300.1| - 0.012 15.9 0.1 0.041 14.3 0.1 2.0 1 0 0 1 1 1 0 HWE histidine kinase HATPase_c_2 PF13581.1 gi|21228378|ref|NP_634300.1| - 0.022 14.5 0.0 0.058 13.1 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Cache_2 PF08269.6 gi|21228378|ref|NP_634300.1| - 0.83 9.6 4.8 2 8.4 0.0 3.6 4 0 0 4 4 4 0 Cache domain DUF45 PF01863.12 gi|21228378|ref|NP_634300.1| - 3.5 7.3 10.3 0.29 10.9 2.9 2.3 3 0 0 3 3 3 0 Protein of unknown function DUF45 MEDS PF14417.1 gi|21228379|ref|NP_634301.1| - 2.9e-70 235.2 0.7 6.8e-70 234.0 0.0 2.1 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.6 gi|21228379|ref|NP_634301.1| - 7.3e-68 224.7 0.8 2.9e-19 68.9 0.1 6.8 6 0 0 6 6 6 4 PAS fold PAS_9 PF13426.1 gi|21228379|ref|NP_634301.1| - 3.6e-52 175.0 3.5 3.7e-15 56.1 0.0 7.0 6 0 0 6 6 6 6 PAS domain PAS_4 PF08448.5 gi|21228379|ref|NP_634301.1| - 2.8e-32 111.0 0.0 2.6e-07 30.6 0.0 7.0 6 1 0 6 6 6 6 PAS fold HisKA_2 PF07568.7 gi|21228379|ref|NP_634301.1| - 5.7e-31 106.2 0.7 5.7e-31 106.2 0.5 3.0 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.19 gi|21228379|ref|NP_634301.1| - 3.3e-25 88.0 0.1 4e-06 26.5 0.0 6.6 6 0 0 6 6 6 4 PAS fold PAS_8 PF13188.1 gi|21228379|ref|NP_634301.1| - 1.1e-13 50.4 0.0 4.6e-05 23.1 0.0 5.2 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|21228379|ref|NP_634301.1| - 6.1e-13 48.4 0.1 1.2e-11 44.3 0.0 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|21228379|ref|NP_634301.1| - 0.0033 17.2 0.0 0.0097 15.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain LeuA_dimer PF08502.5 gi|21228379|ref|NP_634301.1| - 0.0097 15.6 0.1 0.2 11.4 0.0 2.5 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain HWE_HK PF07536.9 gi|21228379|ref|NP_634301.1| - 0.019 15.3 0.1 0.019 15.3 0.0 2.7 3 0 0 3 3 3 0 HWE histidine kinase AdoHcyase PF05221.12 gi|21228380|ref|NP_634302.1| - 5.9e-60 202.4 0.2 7.6e-60 202.1 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|21228380|ref|NP_634302.1| - 6.3e-51 172.4 1.3 6.3e-51 172.4 0.9 1.5 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|21228380|ref|NP_634302.1| - 1.2e-09 37.6 0.2 2.1e-09 36.7 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|21228380|ref|NP_634302.1| - 6.4e-06 25.6 0.1 1.2e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_Gly3P_dh_C PF07479.9 gi|21228380|ref|NP_634302.1| - 0.089 12.5 2.3 0.093 12.4 0.7 1.7 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amidohydro_1 PF01979.15 gi|21228381|ref|NP_634303.1| - 2.1e-60 205.1 1.2 2.6e-60 204.8 0.8 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|21228381|ref|NP_634303.1| - 2.4e-15 56.0 0.0 8.2e-15 54.3 0.0 2.0 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|21228381|ref|NP_634303.1| - 4.6e-13 49.1 0.5 2.3e-10 40.3 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_4 PF13147.1 gi|21228381|ref|NP_634303.1| - 9.6e-13 48.7 0.1 3.1e-12 47.1 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase A_deaminase PF00962.17 gi|21228381|ref|NP_634303.1| - 7.1e-07 28.4 0.0 1.2e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase Urease_alpha PF00449.15 gi|21228381|ref|NP_634303.1| - 0.033 14.3 1.7 0.071 13.2 1.2 1.5 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain HD PF01966.17 gi|21228382|ref|NP_634304.1| - 1.4e-13 50.9 0.8 2.3e-13 50.2 0.6 1.3 1 0 0 1 1 1 1 HD domain DUF137 PF02006.11 gi|21228383|ref|NP_634305.1| - 4.7e-76 254.1 2.7 5.7e-76 253.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 TMF_TATA_bd PF12325.3 gi|21228383|ref|NP_634305.1| - 0.022 14.5 0.8 0.041 13.6 0.6 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding GHMP_kinases_N PF00288.21 gi|21228384|ref|NP_634306.1| - 3.9e-07 30.0 2.0 3.9e-07 30.0 1.4 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|21228384|ref|NP_634306.1| - 3.5e-05 23.9 0.1 0.00091 19.3 0.0 2.4 2 0 0 2 2 2 1 GHMP kinases C terminal DFP PF04127.10 gi|21228385|ref|NP_634307.1| - 2.9e-49 167.1 0.0 2.3e-48 164.2 0.0 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|21228385|ref|NP_634307.1| - 7.8e-31 106.4 0.1 2e-30 105.0 0.0 1.7 1 0 0 1 1 1 1 Flavoprotein NAD_binding_10 PF13460.1 gi|21228385|ref|NP_634307.1| - 0.0003 20.8 0.3 0.0016 18.4 0.0 2.1 2 0 0 2 2 2 1 NADH(P)-binding eRF1_2 PF03464.10 gi|21228388|ref|NP_634310.1| - 3e-06 27.5 0.0 6.3e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 2 DUF1275 PF06912.6 gi|21228389|ref|NP_634311.1| - 1.2e-53 181.4 19.5 1.4e-53 181.2 13.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) MFS_1 PF07690.11 gi|21228389|ref|NP_634311.1| - 7.8e-05 21.5 0.1 7.8e-05 21.5 0.1 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily RseC_MucC PF04246.7 gi|21228389|ref|NP_634311.1| - 0.2 11.2 5.3 0.18 11.3 1.0 2.3 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF3784 PF12650.2 gi|21228389|ref|NP_634311.1| - 0.76 9.7 8.6 5.2 7.0 0.2 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) Cytochrom_B_C PF00032.12 gi|21228389|ref|NP_634311.1| - 0.83 9.9 4.3 1.6 8.9 0.9 2.3 2 0 0 2 2 2 0 Cytochrome b(C-terminal)/b6/petD FtsJ PF01728.14 gi|21228390|ref|NP_634312.1| - 6.1e-57 192.5 0.0 9.2e-57 191.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase TRAM PF01938.15 gi|21228390|ref|NP_634312.1| - 1e-08 34.8 1.4 1.8e-08 34.0 0.9 1.4 1 0 0 1 1 1 1 TRAM domain Methyltransf_23 PF13489.1 gi|21228390|ref|NP_634312.1| - 9.3e-05 22.2 0.0 0.00077 19.2 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228390|ref|NP_634312.1| - 9.3e-05 22.9 0.1 0.0085 16.6 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228390|ref|NP_634312.1| - 0.0002 20.9 0.1 0.0069 15.9 0.0 2.6 1 1 0 1 1 1 1 Methyltransferase domain CbiA PF01656.18 gi|21228390|ref|NP_634312.1| - 0.016 14.6 0.1 0.027 13.8 0.1 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PHP PF02811.14 gi|21228391|ref|NP_634313.1| - 4.7e-16 59.0 0.3 1.1e-15 57.9 0.2 1.6 1 1 0 1 1 1 1 PHP domain ADH_zinc_N PF00107.21 gi|21228391|ref|NP_634313.1| - 0.089 12.3 0.2 5.6 6.5 0.0 2.3 2 0 0 2 2 2 0 Zinc-binding dehydrogenase Amidase_3 PF01520.13 gi|21228392|ref|NP_634314.1| - 3.5e-45 153.9 0.0 5.9e-45 153.1 0.0 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase A2M_N PF01835.14 gi|21228392|ref|NP_634314.1| - 0.014 15.6 0.6 0.038 14.2 0.0 2.0 2 0 0 2 2 2 0 MG2 domain Y_Y_Y PF07495.8 gi|21228392|ref|NP_634314.1| - 0.015 15.0 0.3 0.11 12.3 0.0 2.4 2 0 0 2 2 2 0 Y_Y_Y domain GspH PF12019.3 gi|21228392|ref|NP_634314.1| - 0.032 14.3 1.3 0.13 12.4 0.4 2.3 2 0 0 2 2 2 0 Type II transport protein GspH Big_3_4 PF13754.1 gi|21228392|ref|NP_634314.1| - 1.1 9.6 7.7 1.7 9.0 0.6 3.3 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) DUF45 PF01863.12 gi|21228393|ref|NP_634315.1| - 3.1e-60 203.4 3.0 3.5e-60 203.3 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 SprT-like PF10263.4 gi|21228393|ref|NP_634315.1| - 3.3e-09 36.6 0.1 5e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 SprT-like family WLM PF08325.5 gi|21228393|ref|NP_634315.1| - 0.00061 19.7 3.0 0.00071 19.5 1.0 1.7 1 1 1 2 2 2 1 WLM domain Fe_dep_repr_C PF02742.10 gi|21228393|ref|NP_634315.1| - 0.033 13.8 0.2 2.5 7.8 0.1 2.7 2 1 1 3 3 3 0 Iron dependent repressor, metal binding and dimerisation domain HSDR_N PF04313.9 gi|21228394|ref|NP_634316.1| - 1.9e-34 119.1 0.8 6.4e-34 117.4 0.6 1.9 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|21228394|ref|NP_634316.1| - 1.2e-16 61.1 1.0 1.6e-15 57.4 0.0 2.7 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_10 PF12846.2 gi|21228394|ref|NP_634316.1| - 0.00026 20.5 0.3 0.11 11.9 0.1 3.1 3 0 0 3 3 3 2 AAA-like domain DEAD PF00270.24 gi|21228394|ref|NP_634316.1| - 0.017 14.6 0.1 0.055 12.9 0.0 1.8 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|21228394|ref|NP_634316.1| - 0.025 14.7 0.0 0.29 11.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain VRR_NUC PF08774.6 gi|21228394|ref|NP_634316.1| - 0.069 13.1 0.0 0.24 11.4 0.0 1.9 1 0 0 1 1 1 0 VRR-NUC domain Methylase_S PF01420.14 gi|21228395|ref|NP_634317.1| - 9.6e-32 110.2 0.0 1.1e-19 70.9 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.11 gi|21228396|ref|NP_634318.1| - 1.8e-100 336.0 0.0 2.8e-100 335.4 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21228396|ref|NP_634318.1| - 1.6e-14 54.5 0.0 1.6e-14 54.5 0.0 4.2 4 2 0 4 4 4 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21228396|ref|NP_634318.1| - 1.8e-09 37.6 0.0 5e-09 36.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21228396|ref|NP_634318.1| - 4.9e-06 26.2 0.0 9.9e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|21228396|ref|NP_634318.1| - 0.00027 20.3 0.0 0.00059 19.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Eco57I PF07669.6 gi|21228396|ref|NP_634318.1| - 0.0025 18.1 0.0 0.014 15.7 0.0 2.3 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Methyltransf_31 PF13847.1 gi|21228396|ref|NP_634318.1| - 0.005 16.4 0.0 0.06 12.9 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Rabaptin PF03528.10 gi|21228396|ref|NP_634318.1| - 0.19 11.6 3.7 0.47 10.3 2.6 1.6 1 0 0 1 1 1 0 Rabaptin IncA PF04156.9 gi|21228396|ref|NP_634318.1| - 2.1 7.8 6.3 0.83 9.2 2.1 1.9 2 0 0 2 2 2 0 IncA protein NosD PF05048.8 gi|21228397|ref|NP_634319.1| - 3.5e-53 180.1 29.6 3.5e-53 180.1 20.5 2.5 2 1 1 3 3 3 2 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|21228397|ref|NP_634319.1| - 6.6e-21 73.8 12.2 4.4e-13 48.7 3.4 2.9 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|21228397|ref|NP_634319.1| - 1.3e-14 54.2 86.4 3.1e-10 40.0 21.4 4.0 2 2 2 4 4 4 3 Right handed beta helix region Pectinesterase PF01095.14 gi|21228397|ref|NP_634319.1| - 0.00034 19.2 0.2 0.00061 18.4 0.1 1.3 1 0 0 1 1 1 1 Pectinesterase Big_3_4 PF13754.1 gi|21228397|ref|NP_634319.1| - 0.53 10.6 9.2 0.22 11.8 2.6 2.9 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 3) VCBS PF13517.1 gi|21228397|ref|NP_634319.1| - 3.6 8.0 10.0 23 5.4 0.2 4.6 5 0 0 5 5 5 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Kelch_4 PF13418.1 gi|21228398|ref|NP_634320.1| - 9.7e-12 44.4 0.3 0.35 10.6 0.0 6.2 6 0 0 6 6 6 4 Galactose oxidase, central domain DPPIV_N PF00930.16 gi|21228398|ref|NP_634320.1| - 7.8e-05 21.4 9.8 0.0055 15.3 0.1 4.5 2 1 0 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_3 PF13415.1 gi|21228398|ref|NP_634320.1| - 0.00014 21.9 6.4 6.4 7.0 0.0 5.4 4 1 2 6 6 6 2 Galactose oxidase, central domain PQQ_2 PF13360.1 gi|21228398|ref|NP_634320.1| - 0.0011 18.4 0.1 0.031 13.7 0.0 2.7 2 1 0 2 2 2 1 PQQ-like domain PQQ PF01011.16 gi|21228398|ref|NP_634320.1| - 0.016 14.6 1.3 7.8 6.2 0.0 3.9 4 0 0 4 4 4 0 PQQ enzyme repeat DUF295 PF03478.13 gi|21228398|ref|NP_634320.1| - 0.02 14.2 3.4 7.3 6.0 0.1 4.1 3 1 0 3 3 3 0 Protein of unknown function (DUF295) PSI_PsaH PF03244.9 gi|21228398|ref|NP_634320.1| - 0.025 13.8 1.3 8.4 5.6 0.0 3.8 3 2 1 4 4 4 0 Photosystem I reaction centre subunit VI NUMOD1 PF07453.8 gi|21228398|ref|NP_634320.1| - 9.4 6.2 19.5 18 5.3 0.2 5.7 6 0 0 6 6 6 0 NUMOD1 domain T2SE PF00437.15 gi|21228400|ref|NP_634322.1| - 3.3e-32 111.4 0.0 6.8e-32 110.4 0.0 1.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.1 gi|21228400|ref|NP_634322.1| - 0.0066 16.5 0.2 0.22 11.6 0.0 3.3 4 0 0 4 4 4 1 AAA domain Zeta_toxin PF06414.7 gi|21228400|ref|NP_634322.1| - 0.0074 15.4 0.0 0.018 14.1 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin DEAD PF00270.24 gi|21228400|ref|NP_634322.1| - 0.014 14.9 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase Miro PF08477.8 gi|21228400|ref|NP_634322.1| - 0.016 15.6 0.1 0.11 13.0 0.0 2.5 3 0 0 3 3 3 0 Miro-like protein AAA_16 PF13191.1 gi|21228400|ref|NP_634322.1| - 0.023 14.6 0.0 0.072 13.0 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.22 gi|21228400|ref|NP_634322.1| - 0.059 13.6 0.0 0.15 12.3 0.0 1.7 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.1 gi|21228400|ref|NP_634322.1| - 0.076 12.5 0.0 0.21 11.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF2117 PF09890.4 gi|21228401|ref|NP_634323.1| - 5.1e-86 287.3 0.1 6.7e-86 286.9 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.16 gi|21228401|ref|NP_634323.1| - 0.0096 14.7 0.1 0.019 13.7 0.1 1.4 1 0 0 1 1 1 1 ATP-NAD kinase Lactamase_B_3 PF13483.1 gi|21228402|ref|NP_634324.1| - 1.6e-27 96.1 0.0 2.2e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|21228402|ref|NP_634324.1| - 1.3e-18 67.2 0.0 1.6e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21228402|ref|NP_634324.1| - 5.7e-09 35.9 1.3 2.3e-08 33.9 0.9 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Prismane PF03063.15 gi|21228403|ref|NP_634325.1| - 1.9e-131 438.9 0.0 2.2e-131 438.7 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DUF2088 PF09861.4 gi|21228404|ref|NP_634326.1| - 1.2e-70 236.7 0.0 2e-70 235.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) DUF362 PF04015.7 gi|21228404|ref|NP_634326.1| - 0.0068 15.9 0.0 0.0093 15.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF362) potato_inhibit PF00280.13 gi|21228404|ref|NP_634326.1| - 0.03 14.4 0.0 0.079 13.1 0.0 1.7 1 0 0 1 1 1 0 Potato inhibitor I family DUF2088 PF09861.4 gi|21228405|ref|NP_634327.1| - 2.3e-74 248.8 0.0 3.6e-74 248.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) DUF362 PF04015.7 gi|21228405|ref|NP_634327.1| - 0.0068 15.8 0.0 0.016 14.7 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) PABP PF00658.13 gi|21228405|ref|NP_634327.1| - 0.056 13.1 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain Y1_Tnp PF01797.11 gi|21228406|ref|NP_634328.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like SSF PF00474.12 gi|21228407|ref|NP_634329.1| - 1.2e-56 192.1 42.4 2e-56 191.4 29.4 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family Asparaginase PF00710.15 gi|21228408|ref|NP_634330.1| - 4.4e-91 305.0 0.0 5.3e-91 304.7 0.0 1.0 1 0 0 1 1 1 1 Asparaginase Asp_Glu_race PF01177.17 gi|21228408|ref|NP_634330.1| - 0.013 15.3 0.2 3.7 7.4 0.0 2.3 1 1 1 2 2 2 0 Asp/Glu/Hydantoin racemase zf-primase PF09329.6 gi|21228408|ref|NP_634330.1| - 0.17 11.4 0.5 0.35 10.5 0.3 1.5 1 0 0 1 1 1 0 Primase zinc finger Lyase_1 PF00206.15 gi|21228409|ref|NP_634331.1| - 2.6e-63 214.1 0.0 3.8e-63 213.5 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|21228409|ref|NP_634331.1| - 2.1e-12 46.8 0.1 1.1e-11 44.6 0.0 2.3 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Paramyx_P_V_C PF03210.8 gi|21228409|ref|NP_634331.1| - 0.037 13.8 0.4 0.075 12.8 0.3 1.5 1 1 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal DUF4546 PF15079.1 gi|21228409|ref|NP_634331.1| - 0.069 12.2 0.1 0.21 10.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4546) Methyltransf_11 PF08241.7 gi|21228410|ref|NP_634332.1| - 3.3e-24 85.1 0.0 6.4e-24 84.2 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228410|ref|NP_634332.1| - 5.4e-21 74.9 0.0 6.8e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228410|ref|NP_634332.1| - 5.6e-20 71.4 0.0 7.1e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228410|ref|NP_634332.1| - 1.4e-17 63.6 0.0 2.8e-17 62.6 0.0 1.5 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|21228410|ref|NP_634332.1| - 1.3e-16 60.9 0.0 2.1e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228410|ref|NP_634332.1| - 5e-12 46.3 0.0 7.5e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228410|ref|NP_634332.1| - 3.9e-11 43.2 0.0 7.2e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21228410|ref|NP_634332.1| - 8.4e-07 28.5 0.0 1.2e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.9 gi|21228410|ref|NP_634332.1| - 0.00025 20.2 0.0 0.00036 19.7 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_9 PF08003.6 gi|21228410|ref|NP_634332.1| - 0.00069 18.3 0.0 0.00095 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_26 PF13659.1 gi|21228410|ref|NP_634332.1| - 0.00088 19.2 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Gate PF07670.9 gi|21228411|ref|NP_634333.1| - 8.1e-18 64.3 15.1 2.4e-09 37.0 0.2 3.1 2 1 1 3 3 3 3 Nucleoside recognition MogR_DNAbind PF12181.3 gi|21228411|ref|NP_634333.1| - 0.089 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) SHOCT PF09851.4 gi|21228411|ref|NP_634333.1| - 0.11 11.9 0.1 0.34 10.4 0.0 1.8 2 0 0 2 2 2 0 Short C-terminal domain ABC1 PF03109.11 gi|21228412|ref|NP_634334.1| - 2.4e-27 95.2 0.0 6.3e-27 93.9 0.0 1.7 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.17 gi|21228412|ref|NP_634334.1| - 1.4e-07 31.0 0.0 3.2e-07 29.9 0.0 1.7 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.20 gi|21228412|ref|NP_634334.1| - 1.2e-05 24.6 0.1 0.00028 20.1 0.0 2.5 1 1 1 2 2 2 1 Protein kinase domain WaaY PF06176.6 gi|21228412|ref|NP_634334.1| - 0.0022 17.2 0.0 0.0043 16.2 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) APH PF01636.18 gi|21228412|ref|NP_634334.1| - 0.0076 16.0 0.3 0.021 14.5 0.2 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family TPP_enzyme_C PF02775.16 gi|21228412|ref|NP_634334.1| - 0.074 12.6 0.0 1.4 8.4 0.0 2.5 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HMA PF00403.21 gi|21228413|ref|NP_634335.1| - 3.2e-05 23.9 0.1 3.8e-05 23.7 0.1 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain Smoothelin PF12510.3 gi|21228413|ref|NP_634335.1| - 0.12 12.2 0.1 0.19 11.6 0.1 1.4 1 1 0 1 1 1 0 Smoothelin cytoskeleton protein Cytochrom_B_N PF00033.14 gi|21228414|ref|NP_634336.1| - 4.4e-06 26.1 20.2 1.2e-05 24.7 14.0 1.7 1 1 0 1 1 1 1 Cytochrome b(N-terminal)/b6/petB Ni_hydr_CYTB PF01292.15 gi|21228414|ref|NP_634336.1| - 0.00062 19.2 20.4 0.0015 17.9 14.1 1.7 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.1 gi|21228414|ref|NP_634336.1| - 0.0044 17.1 22.2 0.42 10.7 1.7 3.2 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) DUF4134 PF13572.1 gi|21228414|ref|NP_634336.1| - 0.026 14.6 0.8 0.16 12.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) NiFeSe_Hases PF00374.14 gi|21228415|ref|NP_634337.1| - 1.3e-70 238.6 0.0 1.5e-43 149.3 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Oxidored_q6 PF01058.17 gi|21228416|ref|NP_634338.1| - 7.7e-33 112.9 2.3 1.3e-32 112.1 0.1 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.1 gi|21228416|ref|NP_634338.1| - 5.8e-29 99.9 7.6 4.7e-28 97.0 1.4 3.1 3 0 0 3 3 3 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.4 gi|21228416|ref|NP_634338.1| - 0.049 13.6 1.0 0.049 13.6 0.7 3.2 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence HupF_HypC PF01455.13 gi|21228417|ref|NP_634339.1| - 4e-21 74.7 0.8 5.1e-21 74.4 0.6 1.1 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.11 gi|21228418|ref|NP_634340.1| - 1.1e-137 458.6 0.0 1.3e-137 458.3 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family CBM_X PF06204.6 gi|21228418|ref|NP_634340.1| - 0.12 11.8 0.3 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 Putative carbohydrate binding domain HypA PF01155.14 gi|21228419|ref|NP_634341.1| - 2.6e-31 107.6 2.3 3e-31 107.4 1.6 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family DUF2387 PF09526.5 gi|21228419|ref|NP_634341.1| - 4.9 7.1 5.3 23 4.9 0.3 2.8 2 1 1 3 3 3 0 Probable metal-binding protein (DUF2387) cobW PF02492.14 gi|21228420|ref|NP_634342.1| - 8.6e-37 126.2 1.5 1e-36 126.0 1.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|21228420|ref|NP_634342.1| - 2.1e-06 26.7 1.5 0.0087 14.8 0.3 2.1 2 0 0 2 2 2 2 ArgK protein MobB PF03205.9 gi|21228420|ref|NP_634342.1| - 1.8e-05 24.4 0.0 3.5e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|21228420|ref|NP_634342.1| - 0.00099 19.1 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Arch_ATPase PF01637.13 gi|21228420|ref|NP_634342.1| - 0.0014 18.3 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase NTPase_1 PF03266.10 gi|21228420|ref|NP_634342.1| - 0.0037 17.0 0.1 0.011 15.4 0.1 1.9 1 1 0 1 1 1 1 NTPase AAA_18 PF13238.1 gi|21228420|ref|NP_634342.1| - 0.0038 17.5 0.1 0.0091 16.3 0.1 1.7 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.12 gi|21228420|ref|NP_634342.1| - 0.0054 16.3 0.1 0.012 15.2 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_17 PF13207.1 gi|21228420|ref|NP_634342.1| - 0.0063 17.3 0.2 0.016 16.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain CbiA PF01656.18 gi|21228420|ref|NP_634342.1| - 0.0065 15.9 1.8 0.018 14.4 1.2 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.17 gi|21228420|ref|NP_634342.1| - 0.0083 15.5 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Pox_A32 PF04665.7 gi|21228420|ref|NP_634342.1| - 0.011 15.0 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_22 PF13401.1 gi|21228420|ref|NP_634342.1| - 0.013 15.6 0.0 0.026 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|21228420|ref|NP_634342.1| - 0.016 15.0 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|21228420|ref|NP_634342.1| - 0.017 14.0 0.0 0.031 13.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NB-ARC PF00931.17 gi|21228420|ref|NP_634342.1| - 0.021 13.7 0.1 0.032 13.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain KAP_NTPase PF07693.9 gi|21228420|ref|NP_634342.1| - 0.024 13.6 0.0 0.024 13.6 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_19 PF13245.1 gi|21228420|ref|NP_634342.1| - 0.027 14.2 0.0 0.051 13.3 0.0 1.4 1 0 0 1 1 1 0 Part of AAA domain AAA_33 PF13671.1 gi|21228420|ref|NP_634342.1| - 0.049 13.5 0.0 0.079 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.1 gi|21228420|ref|NP_634342.1| - 0.095 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Miro PF08477.8 gi|21228420|ref|NP_634342.1| - 0.097 13.1 0.1 0.24 11.8 0.0 1.8 2 0 0 2 2 2 0 Miro-like protein UPF0079 PF02367.12 gi|21228420|ref|NP_634342.1| - 0.11 12.1 0.1 0.23 11.1 0.0 1.6 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 TrwB_AAD_bind PF10412.4 gi|21228420|ref|NP_634342.1| - 0.14 10.7 0.0 0.2 10.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AIRS_C PF02769.17 gi|21228421|ref|NP_634343.1| - 1.2e-29 103.2 0.1 1.7e-29 102.8 0.1 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|21228421|ref|NP_634343.1| - 2.5e-16 59.7 0.1 5.3e-16 58.6 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain ABC_sub_bind PF04392.7 gi|21228421|ref|NP_634343.1| - 0.069 12.1 0.0 0.12 11.3 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate binding protein Oxidored_q1 PF00361.15 gi|21228422|ref|NP_634344.1| - 7.7e-47 159.8 19.6 7.7e-47 159.8 13.6 3.2 2 1 2 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|21228422|ref|NP_634344.1| - 3.3e-06 26.5 0.7 3.3e-06 26.5 0.5 3.6 2 1 1 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NADHdh PF00146.16 gi|21228423|ref|NP_634345.1| - 9e-24 84.0 22.6 1.4e-23 83.4 15.7 1.3 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.17 gi|21228424|ref|NP_634346.1| - 1.3e-25 89.5 3.5 1.6e-25 89.2 2.4 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.14 gi|21228425|ref|NP_634347.1| - 8e-10 38.8 0.0 9.4e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Glyco_transf_17 PF04724.8 gi|21228425|ref|NP_634347.1| - 0.055 12.4 0.1 0.064 12.2 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 17 Complex1_49kDa PF00346.14 gi|21228426|ref|NP_634348.1| - 7.8e-46 156.2 0.0 5.6e-33 114.0 0.0 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|21228426|ref|NP_634348.1| - 2.1e-13 49.8 0.5 4.5e-12 45.5 0.0 2.7 3 0 0 3 3 3 1 Nickel-dependent hydrogenase Fer4_7 PF12838.2 gi|21228427|ref|NP_634349.1| - 8.8e-12 45.2 21.6 8.3e-09 35.6 8.7 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21228427|ref|NP_634349.1| - 3.3e-11 42.3 15.6 8.7e-08 31.4 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21228427|ref|NP_634349.1| - 7.4e-09 35.7 10.7 1.1e-08 35.1 7.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228427|ref|NP_634349.1| - 1e-08 34.7 12.2 1e-08 34.7 8.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228427|ref|NP_634349.1| - 9.4e-08 31.5 11.8 0.00014 21.5 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21228427|ref|NP_634349.1| - 3.2e-07 29.9 16.5 0.0001 22.0 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21228427|ref|NP_634349.1| - 1.1e-06 28.8 9.4 0.00078 19.7 0.3 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21228427|ref|NP_634349.1| - 1.2e-06 29.1 11.7 0.00077 20.1 1.1 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21228427|ref|NP_634349.1| - 1.5e-06 27.9 25.0 4.3e-06 26.4 9.4 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21228427|ref|NP_634349.1| - 4.9e-05 23.2 13.8 0.0004 20.3 10.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21228427|ref|NP_634349.1| - 0.00094 19.6 11.5 0.011 16.2 0.4 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|21228427|ref|NP_634349.1| - 0.0022 18.1 14.1 0.043 14.1 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21228427|ref|NP_634349.1| - 0.0023 18.3 21.4 0.038 14.5 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|21228427|ref|NP_634349.1| - 0.022 14.6 6.1 0.049 13.5 4.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21228427|ref|NP_634349.1| - 0.025 14.9 10.5 0.12 12.8 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain LIM PF00412.17 gi|21228427|ref|NP_634349.1| - 0.039 14.0 4.6 0.039 14.0 3.2 1.5 1 1 0 1 1 1 0 LIM domain Fer4_18 PF13746.1 gi|21228427|ref|NP_634349.1| - 1.1 9.6 16.2 1.9 8.9 2.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain HMA PF00403.21 gi|21228428|ref|NP_634350.1| - 2.2e-20 72.5 6.3 2.6e-20 72.3 4.4 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain TusA PF01206.12 gi|21228428|ref|NP_634350.1| - 0.0003 20.3 0.1 0.0011 18.4 0.1 1.8 1 1 0 1 1 1 1 Sulfurtransferase TusA DUF2674 PF10879.3 gi|21228428|ref|NP_634350.1| - 0.00092 18.8 1.9 0.0079 15.9 0.1 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2674) RRM_3 PF08777.6 gi|21228428|ref|NP_634350.1| - 0.0071 16.1 0.4 0.0085 15.9 0.3 1.1 1 0 0 1 1 1 1 RNA binding motif Thioredoxin_3 PF13192.1 gi|21228428|ref|NP_634350.1| - 0.02 14.6 1.6 0.029 14.1 1.1 1.4 1 1 0 1 1 1 0 Thioredoxin domain YabP PF07873.6 gi|21228428|ref|NP_634350.1| - 0.046 13.2 0.9 0.87 9.1 0.1 2.3 2 1 0 2 2 2 0 YabP family DUF692 PF05114.8 gi|21228428|ref|NP_634350.1| - 0.049 12.5 0.1 0.055 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF692) UPF0270 PF06794.7 gi|21228428|ref|NP_634350.1| - 0.069 12.9 0.3 0.092 12.5 0.2 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0270) APP_amyloid PF10515.4 gi|21228428|ref|NP_634350.1| - 0.25 11.6 1.5 1.5 9.1 0.4 2.2 1 1 1 2 2 2 0 beta-amyloid precursor protein C-terminus Spore_YhcN_YlaJ PF09580.5 gi|21228428|ref|NP_634350.1| - 0.54 10.3 4.5 0.62 10.1 3.1 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HMA PF00403.21 gi|21228429|ref|NP_634351.1| - 4.5e-07 29.9 0.2 5e-07 29.7 0.1 1.1 1 0 0 1 1 1 1 Heavy-metal-associated domain E1-E2_ATPase PF00122.15 gi|21228430|ref|NP_634352.1| - 4e-59 199.4 0.7 7.3e-59 198.5 0.5 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.21 gi|21228430|ref|NP_634352.1| - 6.9e-49 167.1 2.9 9.3e-49 166.7 0.5 2.4 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HMA PF00403.21 gi|21228430|ref|NP_634352.1| - 6.3e-47 157.5 0.3 2.4e-14 53.2 0.0 3.7 3 0 0 3 3 3 3 Heavy-metal-associated domain HAD PF12710.2 gi|21228430|ref|NP_634352.1| - 3.6e-20 72.9 0.0 6.8e-20 72.0 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21228430|ref|NP_634352.1| - 6.2e-06 25.9 2.2 0.0017 17.9 0.4 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Pox_A3L PF05288.6 gi|21228430|ref|NP_634352.1| - 0.27 11.0 0.4 32 4.3 0.0 2.5 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF420 PF04238.7 gi|21228431|ref|NP_634353.1| - 0.0045 16.9 0.2 0.0052 16.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF420) DUF4271 PF14093.1 gi|21228431|ref|NP_634353.1| - 0.011 15.4 1.8 0.012 15.2 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Mem_trans PF03547.13 gi|21228431|ref|NP_634353.1| - 0.055 11.7 0.4 0.055 11.7 0.3 1.0 1 0 0 1 1 1 0 Membrane transport protein QueT PF06177.6 gi|21228431|ref|NP_634353.1| - 0.067 13.1 2.9 0.08 12.9 2.0 1.1 1 0 0 1 1 1 0 QueT transporter DUF2207 PF09972.4 gi|21228431|ref|NP_634353.1| - 0.09 11.3 1.1 0.097 11.2 0.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Sdh_cyt PF01127.17 gi|21228431|ref|NP_634353.1| - 0.12 12.1 2.5 0.16 11.8 1.7 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALMT PF11744.3 gi|21228431|ref|NP_634353.1| - 0.14 10.8 1.9 0.22 10.1 1.3 1.4 1 1 0 1 1 1 0 Aluminium activated malate transporter Ion_trans PF00520.26 gi|21228431|ref|NP_634353.1| - 0.46 9.6 4.7 1.1 8.4 3.3 1.6 1 1 0 1 1 1 0 Ion transport protein ABC2_membrane_4 PF12730.2 gi|21228431|ref|NP_634353.1| - 0.53 9.4 9.1 0.68 9.0 6.3 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4534 PF15049.1 gi|21228431|ref|NP_634353.1| - 3.1 7.3 10.4 12 5.5 7.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4534) Baculo_11_kDa PF06143.6 gi|21228431|ref|NP_634353.1| - 9 5.7 8.8 7.3 6.0 0.2 2.1 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF2196 PF09962.4 gi|21228432|ref|NP_634354.1| - 6.4e-31 105.9 5.0 7.1e-31 105.7 3.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) MFS_1 PF07690.11 gi|21228433|ref|NP_634355.1| - 1.3e-55 188.5 49.8 9.9e-54 182.3 25.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.1 gi|21228433|ref|NP_634355.1| - 1.8e-05 23.3 35.3 2.5e-05 22.8 4.4 3.1 2 1 1 3 3 3 2 MFS/sugar transport protein Sugar_tr PF00083.19 gi|21228433|ref|NP_634355.1| - 0.0012 17.5 31.1 0.021 13.4 21.6 2.6 1 1 0 1 1 1 1 Sugar (and other) transporter DUF3353 PF11833.3 gi|21228433|ref|NP_634355.1| - 0.41 10.0 7.3 0.77 9.1 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3353) ATG22 PF11700.3 gi|21228433|ref|NP_634355.1| - 2.1 6.6 39.2 0.081 11.3 6.0 2.6 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like Methyltransf_11 PF08241.7 gi|21228434|ref|NP_634356.1| - 2.3e-22 79.2 0.0 3.5e-22 78.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228434|ref|NP_634356.1| - 1.8e-20 73.0 0.0 2.2e-20 72.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228434|ref|NP_634356.1| - 6.9e-20 71.3 0.0 9.1e-20 70.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228434|ref|NP_634356.1| - 4.6e-15 56.1 0.0 6.6e-15 55.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|21228434|ref|NP_634356.1| - 6.5e-15 54.8 0.0 7.8e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|21228434|ref|NP_634356.1| - 1.1e-13 51.3 0.0 2.5e-13 50.2 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21228434|ref|NP_634356.1| - 1.2e-12 47.8 0.0 1.7e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228434|ref|NP_634356.1| - 3e-12 46.8 0.0 4.3e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21228434|ref|NP_634356.1| - 8.6e-09 34.9 0.0 1.3e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|21228434|ref|NP_634356.1| - 2.9e-08 33.1 0.0 4.2e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MetW PF07021.7 gi|21228434|ref|NP_634356.1| - 9.6e-07 28.3 0.0 1.5e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.8 gi|21228434|ref|NP_634356.1| - 1.5e-06 27.5 0.0 2.1e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.13 gi|21228434|ref|NP_634356.1| - 9.2e-06 25.3 0.0 1.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.13 gi|21228434|ref|NP_634356.1| - 9.3e-06 25.2 0.1 0.00023 20.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase TPMT PF05724.6 gi|21228434|ref|NP_634356.1| - 1.5e-05 24.5 0.0 2.3e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.1 gi|21228434|ref|NP_634356.1| - 0.00047 19.8 0.0 0.00063 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21228434|ref|NP_634356.1| - 0.0014 17.7 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.6 gi|21228434|ref|NP_634356.1| - 0.0022 17.4 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_8 PF05148.10 gi|21228434|ref|NP_634356.1| - 0.0037 16.9 0.0 0.95 9.0 0.0 2.2 2 0 0 2 2 2 1 Hypothetical methyltransferase RrnaAD PF00398.15 gi|21228434|ref|NP_634356.1| - 0.0074 15.3 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.12 gi|21228434|ref|NP_634356.1| - 0.011 14.8 0.0 0.035 13.1 0.0 1.8 1 1 0 1 1 1 0 Putative methyltransferase FmrO PF07091.6 gi|21228434|ref|NP_634356.1| - 0.013 14.4 0.0 0.021 13.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Methyltransf_15 PF09445.5 gi|21228434|ref|NP_634356.1| - 0.019 14.5 0.0 0.029 13.9 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|21228434|ref|NP_634356.1| - 0.029 13.7 0.0 0.041 13.2 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 CheR PF01739.13 gi|21228434|ref|NP_634356.1| - 0.031 13.5 0.1 1.6 7.9 0.0 2.5 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain MethyltransfD12 PF02086.10 gi|21228434|ref|NP_634356.1| - 0.11 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase DOT1 PF08123.8 gi|21228434|ref|NP_634356.1| - 0.12 11.6 0.0 0.32 10.2 0.0 1.7 1 1 1 2 2 2 0 Histone methylation protein DOT1 AdoMet_MTase PF07757.8 gi|21228434|ref|NP_634356.1| - 0.14 12.3 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase N2227 PF07942.7 gi|21228434|ref|NP_634356.1| - 0.14 11.1 0.0 0.25 10.2 0.0 1.4 1 0 0 1 1 1 0 N2227-like protein Multi_Drug_Res PF00893.14 gi|21228435|ref|NP_634357.1| - 1.8e-29 102.0 7.5 2.3e-29 101.7 5.2 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.15 gi|21228435|ref|NP_634357.1| - 0.014 15.4 15.6 0.02 14.9 10.8 1.4 1 1 0 1 1 1 0 EamA-like transporter family EmrE PF13536.1 gi|21228435|ref|NP_634357.1| - 0.027 14.6 13.5 0.092 12.9 9.3 1.7 1 1 0 1 1 1 0 Multidrug resistance efflux transporter DUF4293 PF14126.1 gi|21228435|ref|NP_634357.1| - 0.14 12.0 7.0 3.5 7.5 1.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) Acyl_transf_3 PF01757.17 gi|21228435|ref|NP_634357.1| - 0.63 8.8 13.9 0.66 8.7 9.6 1.0 1 0 0 1 1 1 0 Acyltransferase family YjgP_YjgQ PF03739.9 gi|21228435|ref|NP_634357.1| - 0.85 8.2 7.1 1.2 7.7 4.9 1.3 1 0 0 1 1 1 0 Predicted permease YjgP/YjgQ family DUF2108 PF09881.4 gi|21228435|ref|NP_634357.1| - 1.2 8.9 7.9 6.6 6.6 2.8 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2108) TPT PF03151.11 gi|21228435|ref|NP_634357.1| - 1.7 8.2 9.8 3.5 7.2 6.8 1.5 1 1 0 1 1 1 0 Triose-phosphate Transporter family DUF2740 PF10872.3 gi|21228437|ref|NP_634359.1| - 0.084 12.5 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2740) eIF-1a PF01176.14 gi|21228438|ref|NP_634360.1| - 4e-18 64.5 0.2 5.1e-18 64.2 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 zinc_ribbon_6 PF14599.1 gi|21228440|ref|NP_634362.1| - 0.0043 16.8 0.3 0.0071 16.1 0.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.6 gi|21228440|ref|NP_634362.1| - 0.046 13.3 1.0 0.061 12.9 0.7 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DNA_RNApol_7kD PF03604.8 gi|21228440|ref|NP_634362.1| - 0.13 11.7 2.4 0.5 9.8 1.7 1.8 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2_3 PF13878.1 gi|21228440|ref|NP_634362.1| - 0.2 11.2 1.7 0.29 10.7 0.1 1.9 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO eIF-1a PF01176.14 gi|21228441|ref|NP_634363.1| - 3.7e-12 45.4 1.1 4.3e-12 45.2 0.8 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TPP_enzyme_N PF02776.13 gi|21228442|ref|NP_634364.1| - 2.5e-56 189.8 0.0 1.7e-54 183.8 0.1 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|21228442|ref|NP_634364.1| - 3.5e-38 130.5 0.0 1.2e-37 128.8 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|21228442|ref|NP_634364.1| - 1.7e-29 102.3 0.0 5e-29 100.7 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.11 gi|21228442|ref|NP_634364.1| - 0.015 14.8 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Aldedh PF00171.17 gi|21228443|ref|NP_634365.1| - 1.6e-133 445.4 0.0 1.8e-133 445.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|21228443|ref|NP_634365.1| - 0.002 16.9 0.0 0.0027 16.4 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Cupredoxin_1 PF13473.1 gi|21228445|ref|NP_634367.1| - 1.3e-14 53.9 0.0 1.5e-14 53.7 0.0 1.0 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|21228445|ref|NP_634367.1| - 7.9e-10 38.8 0.6 1.3e-07 31.7 0.4 2.1 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Phage_Coat_A PF05357.8 gi|21228445|ref|NP_634367.1| - 0.13 11.8 2.0 3.1 7.4 0.0 2.1 1 1 1 2 2 2 0 Phage Coat Protein A Copper-bind PF00127.15 gi|21228446|ref|NP_634368.1| - 1e-08 35.3 0.6 0.00032 20.8 0.0 2.2 1 1 1 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Cupredoxin_1 PF13473.1 gi|21228446|ref|NP_634368.1| - 2.4e-08 33.7 0.0 3.6e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Cupredoxin-like domain DDE_Tnp_1_6 PF13751.1 gi|21228447|ref|NP_634369.1| - 1.6e-28 99.1 6.3 4.4e-28 97.7 3.9 2.2 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|21228447|ref|NP_634369.1| - 6.9e-20 71.5 0.3 1.5e-19 70.4 0.2 1.7 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.6 gi|21228447|ref|NP_634369.1| - 4.6e-18 64.8 0.0 1.5e-17 63.2 0.0 1.9 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.1 gi|21228447|ref|NP_634369.1| - 0.0024 18.0 0.1 0.088 13.0 0.0 2.8 2 0 0 2 2 2 1 Transposase DDE domain Methyltransf_18 PF12847.2 gi|21228448|ref|NP_634370.1| - 1.2e-13 51.5 0.0 2.1e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228448|ref|NP_634370.1| - 9.6e-10 38.4 0.0 1.5e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228448|ref|NP_634370.1| - 2e-09 37.1 0.0 3.1e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228448|ref|NP_634370.1| - 5.4e-08 33.1 0.0 1.1e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21228448|ref|NP_634370.1| - 1.8e-07 30.4 0.0 2.5e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|21228448|ref|NP_634370.1| - 2e-07 30.7 0.0 2.9e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|21228448|ref|NP_634370.1| - 2.3e-07 31.1 0.0 4.3e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|21228448|ref|NP_634370.1| - 5.7e-07 29.2 0.0 1.6e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|21228448|ref|NP_634370.1| - 1.4e-06 27.8 0.0 2.1e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.9 gi|21228448|ref|NP_634370.1| - 3.2e-06 26.6 0.0 4.8e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|21228448|ref|NP_634370.1| - 3.2e-06 27.5 0.0 5.8e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|21228448|ref|NP_634370.1| - 4.8e-06 25.8 0.0 7.1e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_26 PF13659.1 gi|21228448|ref|NP_634370.1| - 5.3e-06 26.4 0.0 7.6e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21228448|ref|NP_634370.1| - 2.1e-05 23.7 0.0 3.9e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|21228448|ref|NP_634370.1| - 6.3e-05 22.2 0.1 0.00015 21.0 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|21228448|ref|NP_634370.1| - 7.6e-05 22.3 0.1 0.00012 21.7 0.0 1.4 1 1 0 1 1 1 1 Met-10+ like-protein DREV PF05219.7 gi|21228448|ref|NP_634370.1| - 0.00026 19.9 0.0 0.00039 19.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Ubie_methyltran PF01209.13 gi|21228448|ref|NP_634370.1| - 0.00026 20.1 0.0 0.00044 19.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.4 gi|21228448|ref|NP_634370.1| - 0.0034 16.8 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.6 gi|21228448|ref|NP_634370.1| - 0.0034 16.1 0.0 0.0078 14.9 0.0 1.5 1 1 1 2 2 2 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.12 gi|21228448|ref|NP_634370.1| - 0.0095 15.0 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase ArdA PF07275.6 gi|21228448|ref|NP_634370.1| - 0.025 14.8 0.1 0.052 13.7 0.0 1.4 1 0 0 1 1 1 0 Antirestriction protein (ArdA) GCD14 PF08704.5 gi|21228448|ref|NP_634370.1| - 0.031 13.7 0.0 0.058 12.8 0.0 1.4 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF938 PF06080.7 gi|21228448|ref|NP_634370.1| - 0.038 13.5 0.0 0.055 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) TehB PF03848.9 gi|21228448|ref|NP_634370.1| - 0.063 12.4 0.0 0.099 11.7 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_2 PF00891.13 gi|21228448|ref|NP_634370.1| - 0.091 11.9 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase RimK PF08443.6 gi|21228449|ref|NP_634371.1| - 7.9e-48 162.4 0.0 1.4e-47 161.6 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.11 gi|21228449|ref|NP_634371.1| - 2.2e-18 65.9 0.0 5.4e-18 64.7 0.0 1.6 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_4 PF13535.1 gi|21228449|ref|NP_634371.1| - 1.2e-12 47.8 0.0 1.8e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|21228449|ref|NP_634371.1| - 5.9e-08 32.7 0.0 8.9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21228449|ref|NP_634371.1| - 1.6e-06 27.1 0.0 1.2e-05 24.2 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATPgrasp_YheCD PF14398.1 gi|21228449|ref|NP_634371.1| - 0.00018 20.3 0.1 0.26 10.0 0.0 3.1 1 1 2 3 3 3 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.8 gi|21228449|ref|NP_634371.1| - 0.00025 20.5 0.0 0.001 18.4 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.17 gi|21228449|ref|NP_634371.1| - 0.0027 17.1 0.0 0.0059 15.9 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Synapsin_C PF02750.9 gi|21228449|ref|NP_634371.1| - 0.0046 16.0 0.0 0.0066 15.5 0.0 1.1 1 0 0 1 1 1 1 Synapsin, ATP binding domain CPSase_L_D2 PF02786.12 gi|21228449|ref|NP_634371.1| - 0.0067 15.7 0.0 0.031 13.5 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.1 gi|21228449|ref|NP_634371.1| - 0.0068 15.5 0.0 0.21 10.6 0.0 2.4 2 1 0 2 2 2 1 Sugar-transfer associated ATP-grasp Ins134_P3_kin PF05770.6 gi|21228449|ref|NP_634371.1| - 0.025 13.6 0.0 0.63 9.0 0.0 2.3 1 1 1 2 2 2 0 Inositol 1, 3, 4-trisphosphate 5/6-kinase Herpes_HEPA PF03324.9 gi|21228449|ref|NP_634371.1| - 0.054 13.5 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein TPR_11 PF13414.1 gi|21228450|ref|NP_634372.1| - 7.6e-102 333.0 49.5 2.7e-17 62.1 0.1 6.7 2 2 6 8 8 8 8 TPR repeat TPR_1 PF00515.23 gi|21228450|ref|NP_634372.1| - 3.3e-92 298.6 39.5 3.2e-10 39.1 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228450|ref|NP_634372.1| - 4.6e-80 257.2 38.8 9.2e-08 31.4 0.2 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228450|ref|NP_634372.1| - 9.4e-69 227.3 41.3 9.8e-13 47.8 0.2 6.7 1 1 8 9 9 9 9 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228450|ref|NP_634372.1| - 1.5e-65 216.7 41.7 3.1e-11 43.6 0.4 6.4 1 1 6 8 8 8 8 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228450|ref|NP_634372.1| - 3.4e-57 185.9 28.1 1.1e-06 28.3 0.1 10.5 11 0 0 11 11 10 9 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228450|ref|NP_634372.1| - 4.1e-54 176.3 37.8 2.2e-06 27.0 0.3 10.2 8 2 2 10 10 10 10 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228450|ref|NP_634372.1| - 6.1e-50 163.1 20.2 3.4e-06 27.2 0.1 10.1 1 1 9 10 10 10 10 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228450|ref|NP_634372.1| - 1.6e-38 130.8 26.1 9.1e-08 32.3 0.6 7.7 3 2 4 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228450|ref|NP_634372.1| - 1.3e-37 124.5 20.0 7.1e-05 22.3 0.0 10.2 8 2 2 10 10 10 8 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228450|ref|NP_634372.1| - 8.2e-26 89.9 15.2 4.7e-09 36.2 0.4 5.3 2 2 2 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|21228450|ref|NP_634372.1| - 2e-25 87.4 21.1 0.27 11.7 0.1 10.2 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228450|ref|NP_634372.1| - 2.7e-25 88.0 8.5 3.2e-06 26.8 0.4 6.4 1 1 6 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21228450|ref|NP_634372.1| - 3.2e-22 77.7 26.0 0.00095 19.0 0.1 10.0 10 0 0 10 10 10 4 Tetratricopeptide repeat MIT PF04212.13 gi|21228450|ref|NP_634372.1| - 3.5e-15 55.6 32.7 0.024 14.4 0.1 9.9 8 1 2 10 10 10 4 MIT (microtubule interacting and transport) domain DUF3856 PF12968.2 gi|21228450|ref|NP_634372.1| - 7.8e-15 54.9 12.7 0.015 15.0 0.1 8.1 1 1 6 7 7 7 5 Domain of Unknown Function (DUF3856) NARP1 PF12569.3 gi|21228450|ref|NP_634372.1| - 1.1e-13 50.7 7.0 0.038 12.7 0.0 5.2 2 2 3 5 5 5 5 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|21228450|ref|NP_634372.1| - 2.9e-11 42.9 14.8 0.00031 19.9 0.2 4.6 1 1 2 4 4 4 4 Tetratricopeptide repeat BTAD PF03704.12 gi|21228450|ref|NP_634372.1| - 1.1e-10 42.0 4.4 0.033 14.4 0.5 4.6 1 1 3 5 5 5 2 Bacterial transcriptional activator domain Coatomer_E PF04733.9 gi|21228450|ref|NP_634372.1| - 4.3e-10 39.2 9.7 3e-06 26.6 0.3 4.4 2 2 3 5 5 5 2 Coatomer epsilon subunit PPR PF01535.15 gi|21228450|ref|NP_634372.1| - 1.8e-09 36.9 10.8 0.54 10.3 0.0 8.4 9 0 0 9 9 9 3 PPR repeat TPR_3 PF07720.7 gi|21228450|ref|NP_634372.1| - 2.9e-09 36.5 23.4 0.097 12.4 0.0 9.5 9 1 1 10 10 10 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|21228450|ref|NP_634372.1| - 6e-09 35.8 11.8 0.13 12.4 0.1 5.7 2 2 2 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21228450|ref|NP_634372.1| - 1.5e-07 31.1 14.0 0.57 10.1 0.0 8.1 6 3 3 9 9 9 1 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.9 gi|21228450|ref|NP_634372.1| - 2.3e-07 30.5 0.4 11 6.7 0.0 6.6 6 0 0 6 6 6 0 Tetratricopeptide repeat FAT PF02259.18 gi|21228450|ref|NP_634372.1| - 2.9e-07 29.7 8.8 0.31 9.9 0.1 5.9 1 1 5 7 7 7 2 FAT domain TPR_5 PF12688.2 gi|21228450|ref|NP_634372.1| - 7.3e-07 29.2 7.5 0.52 10.3 0.8 5.8 2 2 3 5 5 4 3 Tetratrico peptide repeat SHNi-TPR PF10516.4 gi|21228450|ref|NP_634372.1| - 1e-06 27.8 16.3 1.4 8.2 0.1 8.6 9 0 0 9 9 8 1 SHNi-TPR Apc5 PF12862.2 gi|21228450|ref|NP_634372.1| - 0.00018 21.2 8.9 1.3 8.9 0.1 6.6 5 2 1 7 7 7 1 Anaphase-promoting complex subunit 5 NRDE-2 PF08424.5 gi|21228450|ref|NP_634372.1| - 0.00097 18.1 3.3 0.24 10.2 0.0 3.1 2 1 0 3 3 3 1 NRDE-2, necessary for RNA interference ChAPs PF09295.5 gi|21228450|ref|NP_634372.1| - 0.016 13.9 0.9 0.27 9.9 0.0 2.3 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Clathrin PF00637.15 gi|21228450|ref|NP_634372.1| - 0.019 14.5 13.8 0.2 11.2 0.3 5.3 1 1 4 5 5 5 0 Region in Clathrin and VPS Pepsin-I3 PF06394.8 gi|21228450|ref|NP_634372.1| - 0.042 13.5 3.5 37 4.0 0.1 5.6 7 0 0 7 7 6 0 Pepsin inhibitor-3-like repeated domain RPN7 PF10602.4 gi|21228450|ref|NP_634372.1| - 0.076 12.3 10.0 0.16 11.2 0.5 4.7 3 1 3 7 7 7 0 26S proteasome subunit RPN7 Surfac_D-trimer PF09006.6 gi|21228450|ref|NP_634372.1| - 0.1 12.3 4.0 1.3 8.8 0.0 3.7 5 0 0 5 5 2 0 Lung surfactant protein D coiled-coil trimerisation IglC PF11550.3 gi|21228450|ref|NP_634372.1| - 0.2 10.9 0.1 0.38 10.0 0.1 1.4 1 0 0 1 1 1 0 Intracellular growth locus C protein Acyl-CoA_ox_N PF14749.1 gi|21228450|ref|NP_634372.1| - 0.24 11.7 1.1 6.1 7.1 0.0 3.3 4 1 1 5 5 4 0 Acyl-coenzyme A oxidase N-terminal Exonuc_VII_S PF02609.11 gi|21228450|ref|NP_634372.1| - 0.32 10.8 8.8 11 5.8 0.1 5.5 5 0 0 5 5 5 0 Exonuclease VII small subunit Aida_N PF08910.5 gi|21228450|ref|NP_634372.1| - 0.55 10.4 6.9 21 5.4 0.2 4.0 3 1 1 4 4 4 0 Aida N-terminus Lambda_Kil PF06301.6 gi|21228450|ref|NP_634372.1| - 1.2 8.6 21.5 1.3 8.5 0.0 7.7 10 0 0 10 10 9 0 Bacteriophage lambda Kil protein HAD_2 PF13419.1 gi|21228451|ref|NP_634373.1| - 7.8e-32 110.8 0.2 1e-31 110.5 0.2 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21228451|ref|NP_634373.1| - 7.6e-17 62.4 0.0 1.1e-15 58.6 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21228451|ref|NP_634373.1| - 2.7e-09 36.5 0.0 4.5e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|21228451|ref|NP_634373.1| - 2.3e-06 27.9 0.3 3.1e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF705 PF05152.7 gi|21228451|ref|NP_634373.1| - 0.00038 19.5 0.0 0.079 11.9 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF705) Acid_PPase PF12689.2 gi|21228451|ref|NP_634373.1| - 0.0056 16.3 0.0 0.43 10.1 0.0 2.3 2 0 0 2 2 2 1 Acid Phosphatase NT5C PF06941.7 gi|21228451|ref|NP_634373.1| - 0.0094 15.4 1.1 0.16 11.4 0.8 2.3 1 1 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) NIF PF03031.13 gi|21228451|ref|NP_634373.1| - 0.056 13.1 0.0 0.66 9.6 0.0 2.3 2 1 0 2 2 2 0 NLI interacting factor-like phosphatase Hydrolase_6 PF13344.1 gi|21228451|ref|NP_634373.1| - 0.11 12.4 0.0 0.34 10.8 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase TPR_1 PF00515.23 gi|21228452|ref|NP_634374.1| - 3.9e-71 231.9 17.3 1.9e-11 43.0 0.0 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21228452|ref|NP_634374.1| - 2.8e-57 190.2 11.0 9.8e-16 57.1 0.2 4.2 4 0 0 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|21228452|ref|NP_634374.1| - 7.2e-54 175.4 14.8 1.8e-08 33.6 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228452|ref|NP_634374.1| - 4.2e-40 132.5 21.8 8.2e-06 25.2 0.0 8.1 7 1 1 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228452|ref|NP_634374.1| - 3.8e-38 129.2 8.8 5.5e-11 42.2 0.0 5.1 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228452|ref|NP_634374.1| - 1.8e-36 121.2 9.1 2.4e-05 24.1 0.1 8.5 8 1 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228452|ref|NP_634374.1| - 1.3e-35 121.2 9.1 5.6e-08 33.2 0.0 4.9 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228452|ref|NP_634374.1| - 4.4e-26 88.9 7.0 0.00051 20.4 0.0 7.9 2 2 6 8 8 8 8 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228452|ref|NP_634374.1| - 1.2e-24 85.8 0.5 0.00018 21.3 0.2 6.0 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228452|ref|NP_634374.1| - 7.4e-24 83.8 6.6 5.9e-07 29.7 0.1 5.7 2 2 3 6 6 6 5 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21228452|ref|NP_634374.1| - 1.1e-17 63.2 9.7 0.25 11.8 0.0 7.7 8 0 0 8 8 7 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228452|ref|NP_634374.1| - 1.8e-15 56.7 7.1 5.2e-05 23.2 0.1 4.2 1 1 2 4 4 4 4 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.2 gi|21228452|ref|NP_634374.1| - 3.2e-12 46.4 5.4 0.0038 17.0 0.0 6.0 1 1 4 5 5 5 3 Domain of Unknown Function (DUF3856) TPR_10 PF13374.1 gi|21228452|ref|NP_634374.1| - 3.5e-12 45.8 5.7 0.12 12.3 0.0 6.9 7 0 0 7 7 7 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21228452|ref|NP_634374.1| - 6.9e-11 41.8 4.1 0.083 12.7 0.0 5.2 4 2 2 6 6 5 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.1 gi|21228452|ref|NP_634374.1| - 4.9e-10 38.4 8.2 0.17 11.7 0.0 7.1 6 1 1 7 7 7 2 Tetratricopeptide repeat MIT PF04212.13 gi|21228452|ref|NP_634374.1| - 8.2e-07 28.8 13.8 1.9 8.4 0.1 7.1 6 2 2 8 8 7 1 MIT (microtubule interacting and transport) domain NARP1 PF12569.3 gi|21228452|ref|NP_634374.1| - 9.2e-07 27.9 3.8 0.09 11.5 0.1 3.7 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 TPR_20 PF14561.1 gi|21228452|ref|NP_634374.1| - 1.7e-05 24.8 1.0 4.7 7.4 0.0 4.2 3 1 0 4 4 4 0 Tetratricopeptide repeat ChAPs PF09295.5 gi|21228452|ref|NP_634374.1| - 2.1e-05 23.4 0.2 0.027 13.2 0.0 2.1 2 0 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TOM20_plant PF06552.7 gi|21228452|ref|NP_634374.1| - 0.00011 21.8 2.8 0.016 14.7 0.0 4.1 2 2 2 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 FAT PF02259.18 gi|21228452|ref|NP_634374.1| - 0.00015 20.8 2.5 0.15 11.0 1.7 3.6 1 1 0 1 1 1 1 FAT domain DUF627 PF04781.7 gi|21228452|ref|NP_634374.1| - 0.0023 17.5 0.1 0.29 10.7 0.0 3.1 3 1 0 3 3 3 1 Protein of unknown function (DUF627) DUF2550 PF10739.4 gi|21228452|ref|NP_634374.1| - 0.0044 16.9 0.0 0.0065 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2550) TPR_3 PF07720.7 gi|21228452|ref|NP_634374.1| - 0.045 13.5 8.3 1.4 8.7 0.0 5.4 7 0 0 7 7 5 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21228452|ref|NP_634374.1| - 0.059 12.6 10.7 2.3 7.5 0.0 5.1 5 0 0 5 5 5 0 SHNi-TPR NTase_sub_bind PF08780.6 gi|21228452|ref|NP_634374.1| - 0.064 13.0 0.7 69 3.2 0.0 4.1 4 1 0 4 4 4 0 Nucleotidyltransferase substrate binding protein like TcdB_N PF12918.2 gi|21228452|ref|NP_634374.1| - 0.17 11.9 2.9 3.1 7.9 0.4 2.9 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain UPF0122 PF04297.9 gi|21228452|ref|NP_634374.1| - 0.31 11.0 2.7 3.3 7.7 0.0 3.7 3 2 1 4 4 4 0 Putative helix-turn-helix protein, YlxM / p13 like Colicin PF01024.14 gi|21228452|ref|NP_634374.1| - 0.34 10.4 4.6 15 5.0 0.0 3.6 3 2 2 5 5 5 0 Colicin pore forming domain Thg1C PF14413.1 gi|21228452|ref|NP_634374.1| - 0.4 10.3 5.4 2.6 7.7 1.1 3.7 2 1 1 3 3 3 0 Thg1 C terminal domain HTH_OrfB_IS605 PF12323.3 gi|21228452|ref|NP_634374.1| - 0.45 9.8 2.6 2.5 7.4 0.0 3.1 3 0 0 3 3 3 0 Helix-turn-helix domain Response_reg PF00072.19 gi|21228453|ref|NP_634375.1| - 2.1e-21 76.0 0.0 3.5e-21 75.3 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain HTH_24 PF13412.1 gi|21228453|ref|NP_634375.1| - 0.00055 19.2 0.6 0.0012 18.1 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|21228453|ref|NP_634375.1| - 0.0013 18.2 0.2 0.0022 17.5 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.7 gi|21228453|ref|NP_634375.1| - 0.0024 17.4 0.5 0.006 16.2 0.3 1.6 1 0 0 1 1 1 1 HTH domain GATase_7 PF13537.1 gi|21228453|ref|NP_634375.1| - 0.048 13.4 0.1 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase domain HTH_Mga PF08280.6 gi|21228453|ref|NP_634375.1| - 0.051 13.3 0.2 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain FeoC PF09012.5 gi|21228453|ref|NP_634375.1| - 0.068 12.8 0.0 0.17 11.5 0.0 1.6 2 0 0 2 2 2 0 FeoC like transcriptional regulator TFIIE_alpha PF02002.12 gi|21228453|ref|NP_634375.1| - 0.075 12.5 0.4 0.18 11.3 0.3 1.6 1 0 0 1 1 1 0 TFIIE alpha subunit HSDR_N PF04313.9 gi|21228453|ref|NP_634375.1| - 0.13 12.0 0.7 0.23 11.1 0.5 1.5 1 1 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) DUF3798 PF12683.2 gi|21228453|ref|NP_634375.1| - 0.14 11.2 0.0 0.26 10.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3798) MarR_2 PF12802.2 gi|21228454|ref|NP_634376.1| - 8.6e-07 28.5 0.0 1.2e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|21228454|ref|NP_634376.1| - 0.00011 21.7 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.1 gi|21228454|ref|NP_634376.1| - 0.00041 19.6 0.0 0.00071 18.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|21228454|ref|NP_634376.1| - 0.00091 18.8 0.1 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|21228454|ref|NP_634376.1| - 0.0025 17.5 0.0 0.0035 17.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.7 gi|21228454|ref|NP_634376.1| - 0.0044 16.6 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 HTH domain DUF1495 PF07381.6 gi|21228454|ref|NP_634376.1| - 0.0066 16.0 0.0 0.33 10.6 0.0 2.0 1 1 1 2 2 2 1 Winged helix DNA-binding domain (DUF1495) HTH_5 PF01022.15 gi|21228454|ref|NP_634376.1| - 0.0076 15.9 0.1 0.01 15.4 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.15 gi|21228454|ref|NP_634376.1| - 0.0079 16.2 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_9 PF08221.6 gi|21228454|ref|NP_634376.1| - 0.0097 15.7 0.1 0.016 15.0 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_27 PF13463.1 gi|21228454|ref|NP_634376.1| - 0.023 14.9 0.0 0.033 14.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|21228454|ref|NP_634376.1| - 0.051 13.3 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Mga PF05043.8 gi|21228454|ref|NP_634376.1| - 0.068 13.4 0.2 0.17 12.2 0.1 1.8 1 1 0 1 1 1 0 Mga helix-turn-helix domain RepL PF05732.6 gi|21228454|ref|NP_634376.1| - 0.078 12.1 0.1 0.084 12.0 0.1 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_Crp_2 PF13545.1 gi|21228454|ref|NP_634376.1| - 0.12 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FUR PF01475.14 gi|21228454|ref|NP_634376.1| - 0.12 12.3 0.1 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Ferric uptake regulator family Pyr_redox_2 PF07992.9 gi|21228455|ref|NP_634377.1| - 8.4e-32 110.6 0.8 9.9e-32 110.4 0.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21228455|ref|NP_634377.1| - 3.7e-18 66.3 0.5 7e-13 49.0 0.0 2.6 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|21228455|ref|NP_634377.1| - 8.9e-15 54.8 6.9 9.5e-12 45.1 0.2 3.5 2 2 2 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|21228455|ref|NP_634377.1| - 8e-12 44.7 3.3 1.9e-05 23.7 0.2 3.4 4 0 0 4 4 4 3 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21228455|ref|NP_634377.1| - 6.6e-09 34.7 1.5 0.00012 20.6 0.1 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.2 gi|21228455|ref|NP_634377.1| - 3.7e-08 32.8 1.4 5.9e-06 25.6 0.0 2.9 2 1 1 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|21228455|ref|NP_634377.1| - 2.8e-07 30.4 0.1 4.7e-05 23.3 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.19 gi|21228455|ref|NP_634377.1| - 9.7e-07 27.9 1.6 0.00012 21.0 0.1 3.6 4 0 0 4 4 4 1 FAD binding domain FAD_binding_3 PF01494.14 gi|21228455|ref|NP_634377.1| - 1e-06 28.0 0.8 4.2e-05 22.7 0.1 2.4 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.12 gi|21228455|ref|NP_634377.1| - 8.2e-06 25.0 2.7 0.0022 17.1 0.1 3.4 4 0 0 4 4 4 1 Thi4 family GIDA PF01134.17 gi|21228455|ref|NP_634377.1| - 2.7e-05 23.1 9.6 0.0038 16.1 0.1 3.8 3 2 2 5 5 5 2 Glucose inhibited division protein A K_oxygenase PF13434.1 gi|21228455|ref|NP_634377.1| - 0.00017 20.6 0.7 0.016 14.1 0.0 2.8 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.1 gi|21228455|ref|NP_634377.1| - 0.00061 19.6 4.4 0.017 14.8 0.1 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.7 gi|21228455|ref|NP_634377.1| - 0.0033 16.3 3.2 0.75 8.6 0.0 2.8 2 1 0 3 3 3 2 Lycopene cyclase protein FMO-like PF00743.14 gi|21228455|ref|NP_634377.1| - 0.014 13.5 0.0 0.025 12.7 0.0 1.5 1 1 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.1 gi|21228455|ref|NP_634377.1| - 0.016 15.4 0.9 0.7 10.1 0.2 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding Trp_halogenase PF04820.9 gi|21228455|ref|NP_634377.1| - 0.039 12.5 1.8 4 5.9 0.1 3.0 3 0 0 3 3 3 0 Tryptophan halogenase VanW PF04294.8 gi|21228455|ref|NP_634377.1| - 0.086 12.0 0.0 0.22 10.7 0.0 1.6 2 0 0 2 2 2 0 VanW like protein Thioredoxin_3 PF13192.1 gi|21228456|ref|NP_634378.1| - 3.5e-11 42.7 0.0 4.5e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.19 gi|21228456|ref|NP_634378.1| - 1.1e-05 25.2 0.0 1.7e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.15 gi|21228456|ref|NP_634378.1| - 1.4e-05 24.7 0.0 1.6e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.1 gi|21228456|ref|NP_634378.1| - 0.0034 17.3 0.1 0.036 14.1 0.0 2.0 1 1 1 2 2 2 1 Thioredoxin-like DSBA PF01323.15 gi|21228456|ref|NP_634378.1| - 0.009 15.5 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_8 PF13905.1 gi|21228456|ref|NP_634378.1| - 0.018 15.1 0.1 4.9 7.3 0.1 2.2 1 1 1 2 2 2 0 Thioredoxin-like TP_methylase PF00590.15 gi|21228457|ref|NP_634379.1| - 5.4e-17 62.1 0.0 6.6e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.8 gi|21228458|ref|NP_634380.1| - 1.3e-30 104.8 1.0 1.5e-30 104.6 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) Lact-deh-memb PF09330.6 gi|21228458|ref|NP_634380.1| - 0.052 12.9 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding DUF555 PF04475.7 gi|21228459|ref|NP_634381.1| - 9.8e-51 169.9 0.1 1.2e-50 169.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.7 gi|21228459|ref|NP_634381.1| - 0.00063 19.7 0.5 1.2 9.2 0.0 2.3 2 0 0 2 2 2 2 Dodecin Rad50_zn_hook PF04423.9 gi|21228459|ref|NP_634381.1| - 0.052 13.0 0.1 0.12 11.9 0.1 1.6 1 0 0 1 1 1 0 Rad50 zinc hook motif BON PF04972.12 gi|21228459|ref|NP_634381.1| - 0.12 12.1 0.8 1.9 8.2 0.0 2.3 2 0 0 2 2 2 0 BON domain PfkB PF00294.19 gi|21228460|ref|NP_634382.1| - 1.3e-53 182.1 0.0 1.6e-53 181.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HAP2-GCS1 PF10699.4 gi|21228460|ref|NP_634382.1| - 0.039 13.9 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 Male gamete fusion factor ATP_bind_4 PF01902.12 gi|21228461|ref|NP_634383.1| - 2.6e-71 239.4 0.1 3e-71 239.2 0.1 1.0 1 0 0 1 1 1 1 ATP-binding region AIRC PF00731.15 gi|21228462|ref|NP_634384.1| - 2.8e-42 143.5 1.1 3.3e-42 143.2 0.7 1.0 1 0 0 1 1 1 1 AIR carboxylase DXP_reductoisom PF02670.11 gi|21228462|ref|NP_634384.1| - 0.031 14.8 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CM_2 PF01817.16 gi|21228463|ref|NP_634385.1| - 7.7e-17 61.1 4.9 8.6e-17 61.0 3.4 1.0 1 0 0 1 1 1 1 Chorismate mutase type II Osmo_CC PF08946.5 gi|21228463|ref|NP_634385.1| - 0.028 14.4 1.5 0.058 13.4 1.0 1.6 1 0 0 1 1 1 0 Osmosensory transporter coiled coil FTCD_C PF04961.7 gi|21228463|ref|NP_634385.1| - 0.062 12.7 0.1 0.066 12.6 0.1 1.0 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase CENP-H PF05837.7 gi|21228463|ref|NP_634385.1| - 0.2 11.8 2.8 0.24 11.5 1.9 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) GHMP_kinases_N PF00288.21 gi|21228464|ref|NP_634386.1| - 2.5e-10 40.2 1.3 2.5e-10 40.2 0.9 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|21228464|ref|NP_634386.1| - 6.1e-05 23.1 0.3 0.00022 21.3 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal PhoU PF01895.14 gi|21228465|ref|NP_634387.1| - 3e-25 88.4 5.0 2.8e-13 50.1 0.1 2.4 2 0 0 2 2 2 2 PhoU domain PspA_IM30 PF04012.7 gi|21228465|ref|NP_634387.1| - 0.088 12.1 0.0 1.4 8.2 0.0 2.2 2 0 0 2 2 2 0 PspA/IM30 family GTP_EFTU PF00009.22 gi|21228466|ref|NP_634388.1| - 1.4e-16 60.5 1.8 4.1e-07 29.6 0.4 2.7 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.18 gi|21228466|ref|NP_634388.1| - 4e-16 59.0 0.1 5.9e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.16 gi|21228466|ref|NP_634388.1| - 4.2e-06 26.1 0.0 0.01 15.1 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family Septin PF00735.13 gi|21228466|ref|NP_634388.1| - 1.3e-05 24.3 0.1 1.6e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Septin Miro PF08477.8 gi|21228466|ref|NP_634388.1| - 1.5e-05 25.4 0.1 4e-05 24.0 0.1 1.7 1 1 0 1 1 1 1 Miro-like protein DUF258 PF03193.11 gi|21228466|ref|NP_634388.1| - 0.00027 20.1 0.1 0.00041 19.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 SRPRB PF09439.5 gi|21228466|ref|NP_634388.1| - 0.00051 19.3 0.0 0.036 13.2 0.0 2.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_17 PF13207.1 gi|21228466|ref|NP_634388.1| - 0.00081 20.2 0.0 0.0014 19.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain FeoB_N PF02421.13 gi|21228466|ref|NP_634388.1| - 0.0032 16.7 0.7 0.029 13.6 0.5 2.5 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.1 gi|21228466|ref|NP_634388.1| - 0.004 17.4 0.0 0.0066 16.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|21228466|ref|NP_634388.1| - 0.0052 16.2 0.0 0.0052 16.2 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain PPV_E1_C PF00519.12 gi|21228466|ref|NP_634388.1| - 0.0072 14.9 0.1 0.01 14.4 0.0 1.2 1 0 0 1 1 1 1 Papillomavirus helicase Ras PF00071.17 gi|21228466|ref|NP_634388.1| - 0.0081 15.5 0.1 2.8 7.3 0.0 2.5 2 1 0 2 2 2 1 Ras family AAA_22 PF13401.1 gi|21228466|ref|NP_634388.1| - 0.0097 16.0 0.0 0.016 15.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.22 gi|21228466|ref|NP_634388.1| - 0.01 16.1 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.1 gi|21228466|ref|NP_634388.1| - 0.012 15.6 0.0 0.015 15.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain Arch_ATPase PF01637.13 gi|21228466|ref|NP_634388.1| - 0.015 15.0 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Archaeal ATPase NB-ARC PF00931.17 gi|21228466|ref|NP_634388.1| - 0.016 14.0 0.0 0.023 13.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA PF00004.24 gi|21228466|ref|NP_634388.1| - 0.045 13.9 0.1 0.1 12.7 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_35 PF14516.1 gi|21228466|ref|NP_634388.1| - 0.062 11.9 0.0 0.096 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain MobB PF03205.9 gi|21228466|ref|NP_634388.1| - 0.079 12.6 0.0 0.13 11.9 0.0 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.17 gi|21228466|ref|NP_634388.1| - 0.079 13.1 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.12 gi|21228466|ref|NP_634388.1| - 0.081 11.7 0.0 0.12 11.2 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 cobW PF02492.14 gi|21228466|ref|NP_634388.1| - 0.085 12.2 0.2 0.83 9.0 0.2 2.3 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.10 gi|21228466|ref|NP_634388.1| - 0.099 12.3 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_14 PF13173.1 gi|21228466|ref|NP_634388.1| - 0.11 12.3 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF2073 PF09846.4 gi|21228467|ref|NP_634389.1| - 3.5e-47 158.3 0.5 4.1e-47 158.1 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) GatB_Yqey PF02637.13 gi|21228467|ref|NP_634389.1| - 0.0071 16.0 1.1 0.0089 15.7 0.7 1.3 1 1 0 1 1 1 1 GatB domain SIS PF01380.17 gi|21228469|ref|NP_634391.1| - 8.6e-18 64.2 0.1 1.2e-17 63.6 0.0 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.1 gi|21228469|ref|NP_634391.1| - 2.8e-06 27.0 3.6 0.023 14.3 0.1 2.2 1 1 1 2 2 2 2 SIS domain THF_DHG_CYH_C PF02882.14 gi|21228469|ref|NP_634391.1| - 0.0025 16.8 1.0 0.0037 16.3 0.5 1.4 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aminotran_1_2 PF00155.16 gi|21228470|ref|NP_634392.1| - 8.3e-69 232.2 0.0 1e-68 231.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|21228470|ref|NP_634392.1| - 1.8e-12 47.0 0.0 3.3e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|21228470|ref|NP_634392.1| - 1.4e-10 40.4 0.0 2.3e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|21228470|ref|NP_634392.1| - 4.1e-10 38.4 0.1 6.1e-10 37.9 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|21228470|ref|NP_634392.1| - 1.4e-07 30.9 0.0 2.6e-07 30.1 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DsbD PF02683.10 gi|21228471|ref|NP_634393.1| - 5.3e-18 65.3 12.5 7.1e-18 64.9 8.7 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|21228471|ref|NP_634393.1| - 5.7e-10 39.2 13.4 7.9e-10 38.8 9.3 1.3 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2910 PF11139.3 gi|21228471|ref|NP_634393.1| - 0.0013 17.9 9.0 0.0065 15.6 6.3 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2910) DUF3816 PF12822.2 gi|21228471|ref|NP_634393.1| - 0.056 13.3 0.3 0.056 13.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3816) Connexin_CCC PF10582.4 gi|21228471|ref|NP_634393.1| - 0.084 12.7 0.0 0.32 10.8 0.0 2.0 1 0 0 1 1 1 0 Gap junction channel protein cysteine-rich domain NOG1 PF06858.9 gi|21228472|ref|NP_634394.1| - 4.4e-21 74.4 0.0 7.6e-21 73.7 0.0 1.4 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.18 gi|21228472|ref|NP_634394.1| - 2.6e-19 69.2 0.0 5.9e-19 68.1 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|21228472|ref|NP_634394.1| - 5.3e-11 42.0 0.0 9e-11 41.2 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Miro PF08477.8 gi|21228472|ref|NP_634394.1| - 6.5e-09 36.3 0.0 1.1e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 Miro-like protein Arf PF00025.16 gi|21228472|ref|NP_634394.1| - 6.1e-06 25.5 0.0 3.9e-05 22.9 0.0 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.22 gi|21228472|ref|NP_634394.1| - 8.1e-05 22.1 0.0 0.0035 16.7 0.0 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.11 gi|21228472|ref|NP_634394.1| - 0.0051 15.9 0.0 0.0084 15.2 0.0 1.4 1 0 0 1 1 1 1 AIG1 family DUF258 PF03193.11 gi|21228472|ref|NP_634394.1| - 0.0066 15.6 0.0 0.031 13.4 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF258 ArgK PF03308.11 gi|21228472|ref|NP_634394.1| - 0.0069 15.1 0.0 0.57 8.9 0.0 2.6 2 1 1 3 3 3 1 ArgK protein AAA_25 PF13481.1 gi|21228472|ref|NP_634394.1| - 0.16 11.3 1.2 2.1 7.6 0.0 2.8 1 1 1 3 3 3 0 AAA domain HrcA_DNA-bdg PF03444.10 gi|21228473|ref|NP_634395.1| - 1e-37 127.4 0.3 2.8e-37 125.9 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.23 gi|21228473|ref|NP_634395.1| - 2.6e-26 91.1 0.6 6.2e-12 45.1 0.2 2.5 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.15 gi|21228473|ref|NP_634395.1| - 2.9e-07 30.5 0.1 9.8e-07 28.8 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.7 gi|21228473|ref|NP_634395.1| - 4.1e-06 26.3 0.1 1.1e-05 24.9 0.1 1.8 1 0 0 1 1 1 1 HTH domain Ribosomal_L9_C PF03948.9 gi|21228473|ref|NP_634395.1| - 0.022 14.8 0.1 0.051 13.6 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain MarR_2 PF12802.2 gi|21228473|ref|NP_634395.1| - 0.052 13.2 0.0 0.21 11.2 0.0 2.1 2 0 0 2 2 2 0 MarR family Sigma70_r4_2 PF08281.7 gi|21228473|ref|NP_634395.1| - 0.06 12.8 0.0 0.26 10.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 Vps4_C PF09336.5 gi|21228473|ref|NP_634395.1| - 0.15 11.9 0.0 0.43 10.5 0.0 1.8 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain PRA-PH PF01503.12 gi|21228474|ref|NP_634396.1| - 5.4e-10 39.4 0.1 5.7e-10 39.3 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.12 gi|21228474|ref|NP_634396.1| - 7.1e-05 22.6 1.1 9.9e-05 22.2 0.8 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain FCD PF07729.7 gi|21228474|ref|NP_634396.1| - 0.019 15.2 0.5 0.024 14.9 0.4 1.6 1 1 0 1 1 1 0 FCD domain CLTH PF10607.4 gi|21228474|ref|NP_634396.1| - 0.077 12.6 0.5 0.11 12.2 0.4 1.3 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain Aconitase PF00330.15 gi|21228475|ref|NP_634397.1| - 5.1e-78 262.6 0.0 4.8e-55 186.8 0.0 2.1 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) CxxCxxCC PF03692.10 gi|21228476|ref|NP_634398.1| - 2.3e-13 50.4 7.7 5.7e-12 45.9 3.8 3.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain ACT PF01842.20 gi|21228477|ref|NP_634399.1| - 6.6e-07 28.6 0.1 1.8e-06 27.2 0.0 1.8 1 0 0 1 1 1 1 ACT domain NT5C PF06941.7 gi|21228478|ref|NP_634400.1| - 1.2e-08 34.6 0.0 0.00022 20.8 0.0 2.1 1 1 1 2 2 2 2 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RDD PF06271.7 gi|21228479|ref|NP_634401.1| - 6.1e-23 81.2 6.5 7.1e-23 81.0 4.5 1.0 1 0 0 1 1 1 1 RDD family DUF3792 PF12670.2 gi|21228479|ref|NP_634401.1| - 0.31 10.9 7.9 0.16 11.8 3.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) DUF2955 PF11168.3 gi|21228479|ref|NP_634401.1| - 0.37 10.4 5.6 2 8.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2955) PrgI PF12666.2 gi|21228479|ref|NP_634401.1| - 1.5 8.9 6.0 2.3 8.4 2.3 2.1 2 0 0 2 2 2 0 PrgI family protein DUF373 PF04123.8 gi|21228480|ref|NP_634402.1| - 2.4e-116 388.5 10.8 2.7e-116 388.3 7.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) PNP_UDP_1 PF01048.15 gi|21228481|ref|NP_634403.1| - 2.7e-45 154.1 0.1 3.1e-45 153.9 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DEAD PF00270.24 gi|21228482|ref|NP_634404.1| - 9.5e-28 96.8 0.0 2.8e-27 95.2 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21228482|ref|NP_634404.1| - 6.9e-14 51.4 0.0 1.4e-13 50.4 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|21228482|ref|NP_634404.1| - 7.2e-07 29.2 0.0 1.5e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|21228482|ref|NP_634404.1| - 0.046 12.5 0.0 0.07 11.9 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain Ribosomal_S13_N PF08069.7 gi|21228482|ref|NP_634404.1| - 0.055 13.3 0.0 0.26 11.1 0.0 2.2 2 0 0 2 2 2 0 Ribosomal S13/S15 N-terminal domain SecA_DEAD PF07517.9 gi|21228482|ref|NP_634404.1| - 0.11 11.7 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 SecA DEAD-like domain DUF3467 PF11950.3 gi|21228483|ref|NP_634405.1| - 7.1e-15 54.8 0.0 1e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) PCP_red PF08369.5 gi|21228483|ref|NP_634405.1| - 0.0038 17.0 0.0 0.0092 15.8 0.0 1.5 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit LSM PF01423.17 gi|21228485|ref|NP_634407.1| - 1.1e-18 66.5 2.2 1.2e-18 66.3 1.5 1.0 1 0 0 1 1 1 1 LSM domain PhoH PF02562.11 gi|21228485|ref|NP_634407.1| - 0.012 14.8 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein B-block_TFIIIC PF04182.7 gi|21228486|ref|NP_634408.1| - 3.8e-05 23.4 0.2 5.3e-05 22.9 0.1 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.2 gi|21228486|ref|NP_634408.1| - 0.0028 17.3 0.0 0.017 14.8 0.0 1.9 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 gi|21228486|ref|NP_634408.1| - 0.021 14.5 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|21228486|ref|NP_634408.1| - 0.058 13.1 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF374 PF04028.8 gi|21228486|ref|NP_634408.1| - 0.15 11.2 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF374) TraG_N PF07916.6 gi|21228488|ref|NP_634410.1| - 5.7 5.2 10.1 7.3 4.8 7.0 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region ABC_tran PF00005.22 gi|21228489|ref|NP_634411.1| - 1.8e-56 190.2 1.2 4.7e-28 98.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|21228489|ref|NP_634411.1| - 2.3e-24 86.8 2.4 5e-10 39.8 0.1 4.3 2 2 1 3 3 3 2 AAA domain SMC_N PF02463.14 gi|21228489|ref|NP_634411.1| - 3.7e-17 62.2 2.4 3.5e-08 32.9 0.1 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|21228489|ref|NP_634411.1| - 1.7e-09 38.3 5.8 6.1e-05 23.4 0.1 2.3 1 1 1 2 2 2 2 AAA domain SbcCD_C PF13558.1 gi|21228489|ref|NP_634411.1| - 5.3e-09 35.8 3.0 0.0042 16.9 0.0 3.6 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.1 gi|21228489|ref|NP_634411.1| - 6.6e-09 36.0 1.9 0.0028 17.6 0.5 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|21228489|ref|NP_634411.1| - 1.7e-08 33.8 0.6 0.0014 18.0 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|21228489|ref|NP_634411.1| - 3.3e-08 33.1 1.2 0.016 14.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain IstB_IS21 PF01695.12 gi|21228489|ref|NP_634411.1| - 2.1e-06 27.2 6.9 0.056 12.8 0.1 4.2 4 0 0 4 4 4 2 IstB-like ATP binding protein DUF258 PF03193.11 gi|21228489|ref|NP_634411.1| - 1.2e-05 24.5 0.5 0.015 14.5 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|21228489|ref|NP_634411.1| - 1.4e-05 25.1 9.8 0.0084 16.2 0.3 4.0 2 2 0 2 2 2 2 AAA domain UPF0079 PF02367.12 gi|21228489|ref|NP_634411.1| - 1.5e-05 24.5 1.2 0.097 12.3 0.0 2.6 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_19 PF13245.1 gi|21228489|ref|NP_634411.1| - 0.00015 21.4 0.7 0.68 9.7 0.0 3.1 3 0 0 3 3 3 2 Part of AAA domain T2SE PF00437.15 gi|21228489|ref|NP_634411.1| - 0.00015 20.8 0.5 0.17 10.7 0.1 2.7 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_30 PF13604.1 gi|21228489|ref|NP_634411.1| - 0.00021 20.9 7.6 0.028 13.9 0.1 3.6 2 2 0 2 2 2 1 AAA domain NACHT PF05729.7 gi|21228489|ref|NP_634411.1| - 0.00021 20.9 0.6 0.0065 16.1 0.0 2.6 2 0 0 2 2 2 1 NACHT domain AAA PF00004.24 gi|21228489|ref|NP_634411.1| - 0.00023 21.3 5.3 0.3 11.3 0.0 4.1 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|21228489|ref|NP_634411.1| - 0.00028 21.0 0.0 0.79 9.9 0.0 2.9 2 0 0 2 2 2 1 RNA helicase AAA_33 PF13671.1 gi|21228489|ref|NP_634411.1| - 0.00028 20.7 2.7 0.92 9.3 0.1 3.3 2 1 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|21228489|ref|NP_634411.1| - 0.00036 21.3 5.4 0.23 12.3 0.7 3.4 2 2 0 2 2 2 2 AAA domain AAA_13 PF13166.1 gi|21228489|ref|NP_634411.1| - 0.00043 18.8 0.3 0.93 7.8 0.0 3.5 3 1 1 4 4 4 1 AAA domain MobB PF03205.9 gi|21228489|ref|NP_634411.1| - 0.00051 19.7 0.8 0.28 10.8 0.0 3.2 4 0 0 4 4 2 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.10 gi|21228489|ref|NP_634411.1| - 0.00073 19.2 5.8 0.098 12.3 0.0 3.5 4 0 0 4 4 4 1 NTPase PhoH PF02562.11 gi|21228489|ref|NP_634411.1| - 0.00097 18.4 0.8 3.5 6.7 0.0 3.5 3 0 0 3 3 3 0 PhoH-like protein ABC_ATPase PF09818.4 gi|21228489|ref|NP_634411.1| - 0.00098 17.8 10.8 0.63 8.5 0.2 4.2 4 1 0 4 4 4 2 Predicted ATPase of the ABC class Mg_chelatase PF01078.16 gi|21228489|ref|NP_634411.1| - 0.0011 18.1 1.2 0.35 9.9 0.0 3.0 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.1 gi|21228489|ref|NP_634411.1| - 0.0012 19.1 8.4 0.27 11.5 0.0 3.7 3 1 0 3 3 2 1 AAA domain AAA_10 PF12846.2 gi|21228489|ref|NP_634411.1| - 0.0023 17.4 4.6 0.21 11.0 0.1 3.8 4 0 0 4 4 4 1 AAA-like domain Miro PF08477.8 gi|21228489|ref|NP_634411.1| - 0.0025 18.2 0.1 0.15 12.5 0.0 2.8 3 0 0 3 3 2 1 Miro-like protein PduV-EutP PF10662.4 gi|21228489|ref|NP_634411.1| - 0.0029 17.0 0.4 0.53 9.7 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.1 gi|21228489|ref|NP_634411.1| - 0.0043 16.9 0.3 8.4 6.3 0.0 3.6 3 0 0 3 3 3 0 AAA domain DLIC PF05783.6 gi|21228489|ref|NP_634411.1| - 0.0053 15.4 0.3 0.19 10.3 0.0 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) PRK PF00485.13 gi|21228489|ref|NP_634411.1| - 0.0057 16.2 0.1 1.6 8.2 0.0 3.1 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family FtsK_SpoIIIE PF01580.13 gi|21228489|ref|NP_634411.1| - 0.0058 16.1 0.1 0.68 9.3 0.0 2.5 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_15 PF13175.1 gi|21228489|ref|NP_634411.1| - 0.0076 15.3 3.8 0.011 14.8 0.1 2.7 3 0 0 3 3 3 1 AAA ATPase domain KaiC PF06745.8 gi|21228489|ref|NP_634411.1| - 0.017 14.2 4.9 1.2 8.1 0.0 3.7 3 1 0 3 3 3 0 KaiC DUF87 PF01935.12 gi|21228489|ref|NP_634411.1| - 0.017 14.9 0.1 0.58 9.9 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF87 GTP_EFTU PF00009.22 gi|21228489|ref|NP_634411.1| - 0.02 14.3 0.4 7.4 5.9 0.1 2.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.1 gi|21228489|ref|NP_634411.1| - 0.02 14.8 2.8 0.36 10.7 0.1 2.7 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.15 gi|21228489|ref|NP_634411.1| - 0.024 14.2 2.7 0.21 11.2 0.1 2.8 3 0 0 3 3 2 0 Adenylylsulphate kinase Zeta_toxin PF06414.7 gi|21228489|ref|NP_634411.1| - 0.035 13.1 0.3 4.4 6.3 0.1 2.5 2 0 0 2 2 2 0 Zeta toxin AAA_24 PF13479.1 gi|21228489|ref|NP_634411.1| - 0.036 13.6 0.4 0.45 10.0 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.9 gi|21228489|ref|NP_634411.1| - 0.037 13.7 1.0 0.15 11.8 0.0 2.4 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) KTI12 PF08433.5 gi|21228489|ref|NP_634411.1| - 0.041 13.0 0.7 9.3 5.3 0.0 2.8 3 0 0 3 3 2 0 Chromatin associated protein KTI12 Zot PF05707.7 gi|21228489|ref|NP_634411.1| - 0.041 13.3 1.7 4.6 6.6 0.0 3.6 4 1 1 5 5 3 0 Zonular occludens toxin (Zot) Sigma54_activ_2 PF14532.1 gi|21228489|ref|NP_634411.1| - 0.056 13.4 0.1 0.19 11.7 0.0 1.9 2 0 0 2 2 1 0 Sigma-54 interaction domain MMR_HSR1 PF01926.18 gi|21228489|ref|NP_634411.1| - 0.059 13.3 2.2 11 5.9 0.2 2.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase Caps_synth PF05704.7 gi|21228489|ref|NP_634411.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein G-alpha PF00503.15 gi|21228489|ref|NP_634411.1| - 0.16 10.6 1.0 0.69 8.5 0.0 2.2 3 0 0 3 3 2 0 G-protein alpha subunit Arch_ATPase PF01637.13 gi|21228489|ref|NP_634411.1| - 0.16 11.6 7.7 0.51 10.0 0.0 3.4 1 1 0 2 2 2 0 Archaeal ATPase ATP_bind_1 PF03029.12 gi|21228489|ref|NP_634411.1| - 0.37 10.2 2.4 2.6 7.5 0.0 2.6 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein CbiQ PF02361.11 gi|21228490|ref|NP_634412.1| - 7.1e-32 110.7 6.3 8.9e-32 110.4 4.4 1.1 1 0 0 1 1 1 1 Cobalt transport protein PigN PF04987.9 gi|21228490|ref|NP_634412.1| - 0.063 11.9 6.5 0.08 11.5 4.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) CARDB PF07705.6 gi|21228491|ref|NP_634413.1| - 3.6e-30 103.9 10.7 3.7e-29 100.7 0.7 4.1 4 1 0 4 4 4 2 CARDB PD40 PF07676.7 gi|21228491|ref|NP_634413.1| - 5.9e-22 76.8 25.1 8.7e-07 28.4 0.2 7.4 8 1 0 8 8 8 5 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|21228491|ref|NP_634413.1| - 2e-14 52.9 3.8 7.5e-05 21.4 0.1 4.7 2 1 2 4 4 4 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.1 gi|21228491|ref|NP_634413.1| - 6e-07 28.2 0.0 0.15 10.4 0.0 3.4 1 1 1 3 3 3 3 Oligogalacturonate lyase WD40 PF00400.27 gi|21228491|ref|NP_634413.1| - 0.0029 17.4 6.5 1.2 9.1 0.1 5.4 6 0 0 6 6 6 1 WD domain, G-beta repeat fn3 PF00041.16 gi|21228491|ref|NP_634413.1| - 0.016 15.3 3.4 0.029 14.5 0.2 3.1 2 1 1 3 3 3 0 Fibronectin type III domain Gmad1 PF10647.4 gi|21228491|ref|NP_634413.1| - 0.021 14.2 0.0 0.21 10.9 0.0 2.3 2 0 0 2 2 2 0 Lipoprotein LpqB beta-propeller domain eIF2A PF08662.6 gi|21228491|ref|NP_634413.1| - 0.025 14.2 0.3 0.81 9.3 0.0 3.1 2 2 1 3 3 3 0 Eukaryotic translation initiation factor eIF2A Transposase_mut PF00872.13 gi|21228492|ref|NP_634414.1| - 3.5e-114 381.3 1.8 4.4e-114 380.9 1.2 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|21228492|ref|NP_634414.1| - 1.2e-13 50.9 0.0 4.7e-13 49.1 0.0 2.0 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|21228492|ref|NP_634414.1| - 1.2e-05 25.0 2.4 0.0033 17.0 0.1 2.3 1 1 1 2 2 2 2 Transposase DDE_Tnp_IS240 PF13610.1 gi|21228492|ref|NP_634414.1| - 0.0016 18.4 3.4 0.068 13.1 2.1 2.6 1 1 1 2 2 2 1 DDE domain HipA_C PF07804.7 gi|21228492|ref|NP_634414.1| - 0.049 13.7 0.1 0.72 10.0 0.1 2.6 2 0 0 2 2 2 0 HipA-like C-terminal domain DUF2769 PF10967.3 gi|21228493|ref|NP_634415.1| - 1.2e-15 57.4 19.6 2.3e-15 56.6 10.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2769) AMP-binding PF00501.23 gi|21228494|ref|NP_634416.1| - 2.7e-105 352.1 0.0 3.2e-105 351.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|21228494|ref|NP_634416.1| - 8e-16 58.7 0.1 1.7e-15 57.7 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT_2 PF13279.1 gi|21228495|ref|NP_634417.1| - 1.3e-09 38.5 0.0 1.7e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.17 gi|21228495|ref|NP_634417.1| - 7.7e-09 35.5 0.0 1.7e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Thioesterase superfamily Acyl-ACP_TE PF01643.12 gi|21228495|ref|NP_634417.1| - 0.00033 19.6 0.0 0.11 11.3 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase LSPR PF06049.7 gi|21228495|ref|NP_634417.1| - 0.25 10.8 2.9 16 5.4 0.0 3.1 2 0 0 2 2 2 0 Coagulation Factor V LSPD Repeat Cupin_2 PF07883.6 gi|21228496|ref|NP_634418.1| - 3.6e-16 58.4 0.6 5.6e-16 57.7 0.4 1.2 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.17 gi|21228496|ref|NP_634418.1| - 5.6e-11 42.1 0.3 8.1e-11 41.6 0.2 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|21228496|ref|NP_634418.1| - 6.2e-11 42.3 0.4 9.6e-11 41.7 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|21228496|ref|NP_634418.1| - 2.2e-10 40.4 0.0 3.6e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21228496|ref|NP_634418.1| - 5.7e-05 23.2 0.0 9.2e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain AraC_binding PF02311.14 gi|21228496|ref|NP_634418.1| - 8.9e-05 22.1 1.0 0.00012 21.8 0.1 1.6 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|21228496|ref|NP_634418.1| - 0.0013 18.0 0.0 0.0021 17.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.1 gi|21228496|ref|NP_634418.1| - 0.0025 17.4 1.3 0.0047 16.5 0.9 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.13 gi|21228496|ref|NP_634418.1| - 0.038 13.6 0.0 0.059 12.9 0.0 1.3 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Cupin_1 PF00190.17 gi|21228496|ref|NP_634418.1| - 0.04 13.3 0.0 0.074 12.4 0.0 1.5 1 0 0 1 1 1 0 Cupin HTH_37 PF13744.1 gi|21228496|ref|NP_634418.1| - 0.048 13.4 0.2 0.086 12.6 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Oxidored_FMN PF00724.15 gi|21228497|ref|NP_634419.1| - 5e-83 278.9 0.0 5.8e-83 278.7 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.16 gi|21228497|ref|NP_634419.1| - 0.00021 20.6 0.1 0.00059 19.1 0.0 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein Dus PF01207.12 gi|21228497|ref|NP_634419.1| - 0.00058 18.7 0.0 0.00094 18.0 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|21228497|ref|NP_634419.1| - 0.085 11.9 0.7 0.17 11.0 0.1 1.6 2 0 0 2 2 2 0 Nitronate monooxygenase HMGL-like PF00682.14 gi|21228497|ref|NP_634419.1| - 0.096 12.3 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 HMGL-like Cytochrom_C_asm PF01578.15 gi|21228498|ref|NP_634420.1| - 6.8e-28 97.6 12.8 6.8e-28 97.6 8.9 1.9 2 0 0 2 2 2 1 Cytochrome C assembly protein DUF4149 PF13664.1 gi|21228498|ref|NP_634420.1| - 0.087 12.8 16.7 0.083 12.9 3.9 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4149) YesK PF14150.1 gi|21228498|ref|NP_634420.1| - 0.11 12.5 0.1 0.11 12.5 0.0 3.3 4 0 0 4 4 4 0 YesK-like protein CcmB PF03379.8 gi|21228499|ref|NP_634421.1| - 6.1e-35 120.3 17.9 7.2e-35 120.1 12.4 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.19 gi|21228499|ref|NP_634421.1| - 2.1e-13 49.9 14.8 3.3e-13 49.3 10.2 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_2 PF12679.2 gi|21228499|ref|NP_634421.1| - 3.7e-12 45.6 17.6 5.8e-12 45.0 12.2 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|21228499|ref|NP_634421.1| - 1.5e-08 34.0 15.6 1.5e-08 34.0 10.8 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21228499|ref|NP_634421.1| - 2.1e-08 33.6 18.8 2.5e-08 33.3 13.0 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|21228499|ref|NP_634421.1| - 0.00028 20.2 17.0 0.00043 19.6 11.8 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|21228500|ref|NP_634422.1| - 1.3e-32 112.9 0.0 1.7e-32 112.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228500|ref|NP_634422.1| - 4.2e-14 53.1 1.2 1.3e-12 48.3 0.8 2.2 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|21228500|ref|NP_634422.1| - 1.1e-07 32.3 0.4 1.8e-07 31.7 0.3 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21228500|ref|NP_634422.1| - 0.0002 20.8 0.2 0.00037 19.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|21228500|ref|NP_634422.1| - 0.00037 19.0 0.0 0.00053 18.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21228500|ref|NP_634422.1| - 0.00047 19.9 0.0 0.0006 19.5 0.0 1.2 1 0 0 1 1 1 1 Archaeal ATPase AAA_15 PF13175.1 gi|21228500|ref|NP_634422.1| - 0.001 18.2 0.0 0.013 14.5 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain UPF0079 PF02367.12 gi|21228500|ref|NP_634422.1| - 0.0026 17.3 0.0 0.0081 15.7 0.0 1.8 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_22 PF13401.1 gi|21228500|ref|NP_634422.1| - 0.003 17.6 0.2 0.0094 16.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21228500|ref|NP_634422.1| - 0.0061 16.7 0.1 0.03 14.5 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MutS_V PF00488.16 gi|21228500|ref|NP_634422.1| - 0.0083 15.5 0.0 0.043 13.2 0.0 1.9 2 0 0 2 2 2 1 MutS domain V SMC_N PF02463.14 gi|21228500|ref|NP_634422.1| - 0.009 15.2 0.0 0.073 12.2 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|21228500|ref|NP_634422.1| - 0.0093 15.3 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21228500|ref|NP_634422.1| - 0.013 14.7 0.0 0.019 14.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|21228500|ref|NP_634422.1| - 0.013 16.2 0.1 0.028 15.2 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|21228500|ref|NP_634422.1| - 0.015 14.8 0.0 0.029 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|21228500|ref|NP_634422.1| - 0.021 14.7 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|21228500|ref|NP_634422.1| - 0.022 14.7 0.1 0.039 13.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.1 gi|21228500|ref|NP_634422.1| - 0.029 14.1 0.0 0.067 12.9 0.0 1.6 1 0 0 1 1 1 0 Part of AAA domain NTPase_1 PF03266.10 gi|21228500|ref|NP_634422.1| - 0.032 13.9 0.0 0.046 13.4 0.0 1.3 1 0 0 1 1 1 0 NTPase AAA_24 PF13479.1 gi|21228500|ref|NP_634422.1| - 0.033 13.7 0.6 0.066 12.7 0.2 1.6 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|21228500|ref|NP_634422.1| - 0.035 13.5 0.2 0.057 12.8 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_14 PF13173.1 gi|21228500|ref|NP_634422.1| - 0.05 13.5 0.0 0.15 11.9 0.0 1.8 1 1 0 2 2 2 0 AAA domain cobW PF02492.14 gi|21228500|ref|NP_634422.1| - 0.06 12.7 0.1 0.23 10.8 0.0 1.8 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.7 gi|21228500|ref|NP_634422.1| - 0.069 12.8 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 NACHT domain ATP-synt_ab PF00006.20 gi|21228500|ref|NP_634422.1| - 0.11 11.9 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.1 gi|21228500|ref|NP_634422.1| - 0.12 12.7 0.4 0.22 11.8 0.3 1.5 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.3 gi|21228500|ref|NP_634422.1| - 0.14 9.4 0.0 0.19 9.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PMSR PF01625.16 gi|21228501|ref|NP_634423.1| - 1.1e-63 213.7 0.9 1.5e-63 213.3 0.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PBP PF01161.15 gi|21228502|ref|NP_634424.1| - 1.1e-34 119.3 0.0 1.4e-34 119.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein DZR PF12773.2 gi|21228503|ref|NP_634425.1| - 0.011 15.5 0.6 0.013 15.2 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon YhfH PF14149.1 gi|21228503|ref|NP_634425.1| - 0.011 15.4 0.2 0.011 15.4 0.1 2.2 1 1 1 2 2 2 0 YhfH-like protein zf-ribbon_3 PF13248.1 gi|21228503|ref|NP_634425.1| - 0.015 14.5 4.4 0.03 13.5 3.1 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-B_box PF00643.19 gi|21228503|ref|NP_634425.1| - 0.045 13.6 1.6 0.063 13.1 1.1 1.2 1 0 0 1 1 1 0 B-box zinc finger PolC_DP2 PF03833.8 gi|21228503|ref|NP_634425.1| - 0.051 11.2 0.3 0.048 11.3 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 C1_2 PF03107.11 gi|21228503|ref|NP_634425.1| - 0.17 12.0 5.0 0.4 10.8 3.5 1.7 1 1 0 1 1 1 0 C1 domain Nudix_N_2 PF14803.1 gi|21228503|ref|NP_634425.1| - 0.61 9.8 3.5 1.8 8.3 0.0 2.5 3 0 0 3 3 3 0 Nudix N-terminal Zn-ribbon_8 PF09723.5 gi|21228503|ref|NP_634425.1| - 0.78 9.7 4.5 6 6.9 0.1 2.4 2 1 0 2 2 2 0 Zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|21228503|ref|NP_634425.1| - 2.9 7.4 5.9 61 3.2 3.4 2.8 2 1 0 2 2 2 0 A2L zinc ribbon domain C1_3 PF07649.7 gi|21228503|ref|NP_634425.1| - 9.1 6.4 9.3 0.75 9.8 2.3 2.2 2 1 0 2 2 2 0 C1-like domain DUF362 PF04015.7 gi|21228504|ref|NP_634426.1| - 1.3e-39 135.8 0.0 1.6e-39 135.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Antitoxin-MazE PF04014.13 gi|21228504|ref|NP_634426.1| - 0.074 12.8 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 Antidote-toxin recognition MazE TrkA_C PF02080.16 gi|21228505|ref|NP_634427.1| - 2.2e-28 97.6 0.1 2.9e-13 49.2 0.0 2.6 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.14 gi|21228505|ref|NP_634427.1| - 2.2e-15 56.8 16.7 2.2e-09 37.6 4.6 2.9 2 1 1 3 3 3 2 PhoU domain PhoU_div PF01865.11 gi|21228505|ref|NP_634427.1| - 5e-05 22.5 10.1 0.027 13.6 0.9 2.4 2 0 0 2 2 2 2 Protein of unknown function DUF47 MgtE PF01769.11 gi|21228506|ref|NP_634428.1| - 2.6e-14 53.6 9.3 4.4e-14 52.9 6.5 1.3 1 0 0 1 1 1 1 Divalent cation transporter DUF1616 PF07760.6 gi|21228506|ref|NP_634428.1| - 0.057 12.5 3.6 0.12 11.5 2.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) YwiC PF14256.1 gi|21228506|ref|NP_634428.1| - 0.33 11.0 5.0 0.64 10.1 3.5 1.8 1 1 0 1 1 1 0 YwiC-like protein IncA PF04156.9 gi|21228506|ref|NP_634428.1| - 1.8 8.1 7.0 3.1 7.3 4.9 1.5 1 0 0 1 1 1 0 IncA protein ABC2_membrane_4 PF12730.2 gi|21228506|ref|NP_634428.1| - 4.5 6.3 19.7 0.35 9.9 9.9 1.7 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF4396 PF14342.1 gi|21228506|ref|NP_634428.1| - 5.5 7.1 11.5 36 4.4 7.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4396) MgtE PF01769.11 gi|21228507|ref|NP_634429.1| - 4.2e-20 72.4 7.7 4.2e-20 72.4 5.3 1.5 2 0 0 2 2 2 1 Divalent cation transporter DUF4257 PF14074.1 gi|21228507|ref|NP_634429.1| - 0.11 12.1 2.6 0.63 9.7 1.8 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4257) DUF4044 PF13253.1 gi|21228510|ref|NP_634432.1| - 0.63 9.2 3.0 1.3 8.2 2.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Reprolysin_5 PF13688.1 gi|21228511|ref|NP_634433.1| - 1.9e-21 76.8 9.9 3.2e-21 76.1 6.9 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_3 PF13582.1 gi|21228511|ref|NP_634433.1| - 4.9e-06 27.0 3.6 4.9e-06 27.0 2.5 2.0 2 0 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_U4 PF03419.8 gi|21228516|ref|NP_634438.1| - 0.041 12.9 8.6 0.013 14.6 4.1 1.4 1 1 0 1 1 1 0 Sporulation factor SpoIIGA PalH PF08733.5 gi|21228516|ref|NP_634438.1| - 3.6 6.3 9.7 2.7 6.7 6.1 1.4 1 1 0 1 1 1 0 PalH/RIM21 Streptin-Immun PF11083.3 gi|21228517|ref|NP_634439.1| - 0.14 12.1 0.6 0.27 11.2 0.2 1.6 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein AsnC_trans_reg PF01037.16 gi|21228518|ref|NP_634440.1| - 5.4e-11 42.0 0.3 5.7e-11 41.9 0.2 1.0 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 gi|21228518|ref|NP_634440.1| - 3.9e-05 23.2 0.1 4.4e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 GYD domain ACT_4 PF13291.1 gi|21228518|ref|NP_634440.1| - 0.027 14.7 0.1 0.29 11.5 0.1 1.9 2 0 0 2 2 2 0 ACT domain Chlor_dismutase PF06778.7 gi|21228518|ref|NP_634440.1| - 0.043 13.5 0.1 0.045 13.4 0.1 1.1 1 0 0 1 1 1 0 Chlorite dismutase Topo-VIb_trans PF09239.6 gi|21228519|ref|NP_634441.1| - 7.2e-69 230.4 0.0 1.1e-68 229.7 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|21228519|ref|NP_634441.1| - 1.4e-13 50.5 0.0 5.1e-13 48.7 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|21228519|ref|NP_634441.1| - 1.1e-09 38.0 0.0 3.8e-09 36.3 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MAF_flag10 PF01973.13 gi|21228519|ref|NP_634441.1| - 0.0091 15.5 0.0 0.023 14.2 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF115 FbpA PF05833.6 gi|21228519|ref|NP_634441.1| - 0.028 12.9 1.5 0.04 12.4 0.0 1.9 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) HATPase_c_2 PF13581.1 gi|21228519|ref|NP_634441.1| - 0.028 14.1 0.0 0.48 10.2 0.0 2.5 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain PFU PF09070.6 gi|21228519|ref|NP_634441.1| - 0.14 12.2 0.0 0.35 10.9 0.0 1.6 1 0 0 1 1 1 0 PFU (PLAA family ubiquitin binding) TP6A_N PF04406.9 gi|21228520|ref|NP_634442.1| - 5.3e-19 67.6 0.1 1.1e-18 66.6 0.1 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DNA_gyraseB PF00204.20 gi|21228521|ref|NP_634443.1| - 3.1e-63 212.0 0.9 4.7e-63 211.4 0.6 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.16 gi|21228521|ref|NP_634443.1| - 1.3e-30 104.8 0.1 2.6e-30 103.9 0.0 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.17 gi|21228521|ref|NP_634443.1| - 2.1e-25 88.5 0.0 4.8e-25 87.4 0.0 1.6 1 0 0 1 1 1 1 Toprim domain HATPase_c PF02518.21 gi|21228521|ref|NP_634443.1| - 9.1e-19 67.2 0.1 1.6e-18 66.4 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|21228521|ref|NP_634443.1| - 5.8e-05 22.7 0.0 0.00014 21.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.15 gi|21228522|ref|NP_634444.1| - 2.4e-157 524.1 0.6 3.2e-157 523.7 0.4 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.8 gi|21228522|ref|NP_634444.1| - 7.9e-68 223.5 15.8 9.5e-18 63.2 0.1 6.6 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller TraG-D_C PF12696.2 gi|21228522|ref|NP_634444.1| - 0.12 12.2 0.0 0.12 12.2 0.0 2.3 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG HATPase_c_3 PF13589.1 gi|21228523|ref|NP_634445.1| - 2.4e-13 49.9 0.0 7.6e-13 48.2 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|21228523|ref|NP_634445.1| - 3.6e-10 39.5 0.0 9.4e-10 38.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.17 gi|21228523|ref|NP_634445.1| - 0.0019 18.2 1.5 0.029 14.3 1.0 2.8 1 1 0 1 1 1 1 HD domain PDEase_I PF00233.14 gi|21228523|ref|NP_634445.1| - 0.052 13.3 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase DUF457 PF04307.9 gi|21228524|ref|NP_634446.1| - 1.5e-31 108.9 10.8 2.3e-31 108.2 7.5 1.3 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Sod_Fe_C PF02777.13 gi|21228525|ref|NP_634447.1| - 2.1e-38 130.3 0.1 3.9e-38 129.5 0.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|21228525|ref|NP_634447.1| - 2.3e-27 95.0 1.5 4e-27 94.2 1.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain EFhand_Ca_insen PF08726.5 gi|21228525|ref|NP_634447.1| - 0.13 12.2 0.3 0.27 11.2 0.2 1.5 1 0 0 1 1 1 0 Ca2+ insensitive EF hand DUF457 PF04307.9 gi|21228526|ref|NP_634448.1| - 2.1e-33 114.8 10.9 9.3e-33 112.7 7.5 1.9 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF3816 PF12822.2 gi|21228526|ref|NP_634448.1| - 0.046 13.6 1.2 0.082 12.7 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3816) DUF2618 PF10940.3 gi|21228526|ref|NP_634448.1| - 0.14 11.9 0.3 0.32 10.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) PsbK PF02533.10 gi|21228526|ref|NP_634448.1| - 0.15 12.0 2.7 0.34 10.8 1.9 1.5 1 0 0 1 1 1 0 Photosystem II 4 kDa reaction centre component DUF2626 PF11117.3 gi|21228526|ref|NP_634448.1| - 0.25 11.7 4.7 0.11 12.9 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2626) DUF457 PF04307.9 gi|21228527|ref|NP_634449.1| - 1.8e-27 95.6 13.7 5.4e-27 94.0 9.5 1.7 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF1600 PF07667.6 gi|21228527|ref|NP_634449.1| - 0.0093 16.0 2.6 0.0093 16.0 1.8 2.6 1 1 2 3 3 3 1 Protein of unknown function (DUF1600) DUF1214 PF06742.6 gi|21228527|ref|NP_634449.1| - 0.046 14.1 0.1 0.095 13.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1214) DLH PF01738.13 gi|21228528|ref|NP_634450.1| - 5.6e-34 117.3 0.0 8.2e-32 110.2 0.0 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_5 PF12695.2 gi|21228528|ref|NP_634450.1| - 2.8e-18 66.0 0.0 4e-18 65.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|21228528|ref|NP_634450.1| - 2.2e-11 43.3 0.0 1.2e-06 27.8 0.0 2.5 1 1 1 2 2 2 2 Prolyl oligopeptidase family Chlorophyllase PF07224.6 gi|21228528|ref|NP_634450.1| - 5.1e-09 35.3 0.0 7.7e-09 34.7 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase Abhydrolase_6 PF12697.2 gi|21228528|ref|NP_634450.1| - 2.4e-08 34.1 0.0 7e-06 26.0 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Chlorophyllase2 PF12740.2 gi|21228528|ref|NP_634450.1| - 1e-07 31.1 0.0 1.7e-07 30.3 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_3 PF07859.8 gi|21228528|ref|NP_634450.1| - 0.0016 18.0 0.0 0.13 11.8 0.0 2.3 1 1 1 2 2 2 1 alpha/beta hydrolase fold PAF-AH_p_II PF03403.8 gi|21228528|ref|NP_634450.1| - 0.0026 16.1 0.0 0.046 11.9 0.0 2.0 1 1 1 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Hydrolase_4 PF12146.3 gi|21228528|ref|NP_634450.1| - 0.012 15.4 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative lysophospholipase BAAT_C PF08840.6 gi|21228528|ref|NP_634450.1| - 0.018 14.7 0.0 0.073 12.7 0.0 1.9 1 1 1 3 3 3 0 BAAT / Acyl-CoA thioester hydrolase C terminal TPR_8 PF13181.1 gi|21228528|ref|NP_634450.1| - 0.13 12.0 0.4 0.31 10.9 0.3 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat URO-D PF01208.12 gi|21228529|ref|NP_634451.1| - 2.1e-72 243.9 0.0 2.4e-72 243.7 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) B12-binding PF02310.14 gi|21228530|ref|NP_634452.1| - 8.6e-20 70.8 0.7 1.4e-19 70.1 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21228530|ref|NP_634452.1| - 4.1e-10 39.5 0.1 1.4e-09 37.8 0.0 1.9 2 0 0 2 2 2 1 B12 binding domain Peripla_BP_6 PF13458.1 gi|21228530|ref|NP_634452.1| - 0.056 12.7 0.1 0.081 12.2 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein Peripla_BP_4 PF13407.1 gi|21228530|ref|NP_634452.1| - 0.059 12.7 0.1 0.95 8.7 0.1 2.0 2 0 0 2 2 2 0 Periplasmic binding protein domain DapB_N PF01113.15 gi|21228530|ref|NP_634452.1| - 0.079 12.8 0.9 0.34 10.8 0.6 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DnaB_C PF03796.10 gi|21228531|ref|NP_634453.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21228531|ref|NP_634453.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21228531|ref|NP_634453.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21228531|ref|NP_634453.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.9 gi|21228532|ref|NP_634454.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21228532|ref|NP_634454.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21228532|ref|NP_634454.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21228532|ref|NP_634454.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21228532|ref|NP_634454.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21228532|ref|NP_634454.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain PAP2 PF01569.16 gi|21228533|ref|NP_634455.1| - 1.1e-18 67.1 2.2 1.8e-18 66.4 0.1 2.1 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.1 gi|21228533|ref|NP_634455.1| - 3.7e-06 26.5 0.0 7.1e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 PAP2 superfamily TctB PF07331.6 gi|21228533|ref|NP_634455.1| - 2.1 7.9 12.5 0.037 13.6 1.0 2.5 2 1 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family SOR_SNZ PF01680.12 gi|21228534|ref|NP_634456.1| - 1.2e-107 358.2 8.5 1.8e-107 357.6 5.9 1.2 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|21228534|ref|NP_634456.1| - 4.5e-11 42.2 11.9 3.3e-08 32.9 1.5 2.8 2 2 1 3 3 3 2 Thiazole biosynthesis protein ThiG DUF561 PF04481.7 gi|21228534|ref|NP_634456.1| - 0.00083 18.3 0.4 0.026 13.4 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF561) IGPS PF00218.16 gi|21228534|ref|NP_634456.1| - 0.0013 17.8 0.4 0.0088 15.1 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NanE PF04131.9 gi|21228534|ref|NP_634456.1| - 0.0014 17.6 4.8 0.012 14.6 0.2 2.9 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.10 gi|21228534|ref|NP_634456.1| - 0.0023 17.1 7.5 0.0063 15.7 0.3 2.3 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.12 gi|21228534|ref|NP_634456.1| - 0.0044 15.8 1.6 0.27 10.0 0.1 2.4 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|21228534|ref|NP_634456.1| - 0.0051 16.0 0.7 0.0051 16.0 0.5 1.6 2 0 0 2 2 2 1 PcrB family OMPdecase PF00215.19 gi|21228534|ref|NP_634456.1| - 0.0092 15.4 0.7 0.51 9.6 0.0 2.4 1 1 1 2 2 2 1 Orotidine 5'-phosphate decarboxylase / HUMPS family His_biosynth PF00977.16 gi|21228534|ref|NP_634456.1| - 0.022 14.0 0.4 0.19 10.9 0.0 2.2 2 0 0 2 2 2 0 Histidine biosynthesis protein SNO PF01174.14 gi|229021091|ref|NP_634457.2| - 4e-53 179.8 0.0 4.5e-53 179.6 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.23 gi|229021091|ref|NP_634457.2| - 8.5e-11 41.6 0.4 1.1e-09 37.9 0.3 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|229021091|ref|NP_634457.2| - 1.7e-10 40.7 0.0 2.2e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.12 gi|229021091|ref|NP_634457.2| - 1e-09 38.3 0.0 1.3e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.4 gi|229021091|ref|NP_634457.2| - 0.0002 20.2 0.0 0.00037 19.4 0.0 1.4 2 0 0 2 2 2 1 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.19 gi|229021091|ref|NP_634457.2| - 0.0053 16.2 0.0 0.007 15.8 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family Peptidase_C26 PF07722.8 gi|229021091|ref|NP_634457.2| - 0.017 14.5 0.2 0.11 11.9 0.1 2.4 1 1 0 1 1 1 0 Peptidase C26 DUF4066 PF13278.1 gi|229021091|ref|NP_634457.2| - 0.042 13.1 0.0 0.062 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative amidotransferase PAS_4 PF08448.5 gi|21228537|ref|NP_634459.1| - 3e-44 149.5 0.0 3.4e-11 43.1 0.0 5.4 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.1 gi|21228537|ref|NP_634459.1| - 3e-43 146.4 0.1 2.8e-18 66.2 0.0 5.7 5 0 0 5 5 5 5 PAS domain PAS PF00989.19 gi|21228537|ref|NP_634459.1| - 3.3e-32 110.6 0.0 1.9e-14 53.4 0.0 5.6 5 0 0 5 5 5 5 PAS fold HisKA_2 PF07568.7 gi|21228537|ref|NP_634459.1| - 8.9e-30 102.3 2.9 8.9e-30 102.3 2.0 2.5 3 0 0 3 3 3 1 Histidine kinase PAS_3 PF08447.6 gi|21228537|ref|NP_634459.1| - 5.2e-29 100.1 0.0 2.2e-15 56.5 0.0 5.2 5 0 0 5 5 5 2 PAS fold PAS_8 PF13188.1 gi|21228537|ref|NP_634459.1| - 1.2e-24 85.3 0.0 3.6e-06 26.6 0.0 5.5 5 0 0 5 5 5 3 PAS domain HATPase_c PF02518.21 gi|21228537|ref|NP_634459.1| - 2e-10 40.3 0.2 5.4e-10 38.9 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|21228537|ref|NP_634459.1| - 9.6e-09 35.4 0.1 0.013 15.7 0.0 5.1 4 1 1 5 5 5 1 PAS domain PAS_7 PF12860.2 gi|21228537|ref|NP_634459.1| - 1.1e-08 35.0 0.3 0.58 10.1 0.0 5.7 5 1 0 5 5 5 2 PAS fold HATPase_c_2 PF13581.1 gi|21228537|ref|NP_634459.1| - 2.9e-05 23.8 0.0 7.5e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21228537|ref|NP_634459.1| - 0.0062 16.9 0.2 0.0062 16.9 0.1 2.8 3 0 0 3 3 3 1 HWE histidine kinase DDE_Tnp_IS66 PF03050.9 gi|21228538|ref|NP_634460.1| - 2.2e-72 243.5 0.0 2.6e-72 243.3 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21228538|ref|NP_634460.1| - 1.4e-10 41.0 4.0 3.5e-10 39.7 2.8 1.7 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21228538|ref|NP_634460.1| - 1.9e-06 27.8 5.2 0.0039 17.1 0.1 3.1 3 0 0 3 3 3 2 DDE domain DZR PF12773.2 gi|21228538|ref|NP_634460.1| - 0.013 15.2 1.6 0.047 13.5 0.6 2.4 2 0 0 2 2 2 0 Double zinc ribbon Apolipoprotein PF01442.13 gi|21228538|ref|NP_634460.1| - 0.027 13.9 0.5 0.044 13.2 0.4 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21228538|ref|NP_634460.1| - 0.09 12.5 1.7 0.53 10.1 0.9 2.6 2 1 0 2 2 2 0 FIP domain zf-ribbon_3 PF13248.1 gi|21228538|ref|NP_634460.1| - 0.13 11.5 4.2 0.39 9.9 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain DUF164 PF02591.10 gi|21228538|ref|NP_634460.1| - 0.14 11.9 0.1 0.14 11.9 0.1 2.1 2 0 0 2 2 1 0 Putative zinc ribbon domain zf-RING_5 PF14634.1 gi|21228538|ref|NP_634460.1| - 0.3 10.8 6.5 1.4 8.7 0.0 3.2 2 1 0 2 2 2 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 gi|21228538|ref|NP_634460.1| - 0.54 9.8 6.9 1.8 8.1 0.2 2.9 2 0 0 2 2 2 0 zinc-ribbon domain Takusan PF04822.8 gi|21228538|ref|NP_634460.1| - 1.4 8.6 6.7 0.22 11.3 1.8 1.8 2 0 0 2 2 2 0 Takusan Mut7-C PF01927.11 gi|21228538|ref|NP_634460.1| - 2.6 7.9 5.8 0.53 10.2 1.3 1.9 2 0 0 2 2 2 0 Mut7-C RNAse domain DnaB_C PF03796.10 gi|21228539|ref|NP_634461.1| - 0.0078 15.1 0.0 0.0086 14.9 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AKNA PF12443.3 gi|21228539|ref|NP_634461.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor Pyridox_oxidase PF01243.15 gi|21228540|ref|NP_634462.1| - 2.9e-16 59.2 0.0 3.5e-16 58.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|21228540|ref|NP_634462.1| - 0.086 12.3 0.1 1.1 8.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF447) Y1_Tnp PF01797.11 gi|21228541|ref|NP_634463.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like PPC PF04151.10 gi|21228542|ref|NP_634464.1| - 0.00048 21.0 2.6 0.00055 20.8 0.4 2.0 2 0 0 2 2 2 1 Bacterial pre-peptidase C-terminal domain HTH_24 PF13412.1 gi|21228543|ref|NP_634465.1| - 2.3e-17 62.1 1.2 9.2e-09 34.5 0.4 2.6 3 0 0 3 3 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|21228543|ref|NP_634465.1| - 5.3e-14 51.7 0.0 2e-06 27.5 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.15 gi|21228543|ref|NP_634465.1| - 3.6e-10 39.3 0.0 0.00023 20.7 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.7 gi|21228543|ref|NP_634465.1| - 1.5e-08 34.1 0.3 0.00023 20.7 0.1 2.4 2 0 0 2 2 2 2 HTH domain HTH_Crp_2 PF13545.1 gi|21228543|ref|NP_634465.1| - 5.5e-07 29.2 0.1 0.0011 18.7 0.0 2.4 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain MarR PF01047.17 gi|21228543|ref|NP_634465.1| - 7.5e-07 28.7 0.1 0.02 14.6 0.0 2.8 3 0 0 3 3 2 2 MarR family HTH_28 PF13518.1 gi|21228543|ref|NP_634465.1| - 3.3e-06 26.9 0.3 0.0047 16.9 0.1 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_34 PF13601.1 gi|21228543|ref|NP_634465.1| - 3.5e-06 26.9 0.1 0.0067 16.4 0.0 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain TrmB PF01978.14 gi|21228543|ref|NP_634465.1| - 4.3e-06 26.3 0.1 0.0022 17.6 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_41 PF14502.1 gi|21228543|ref|NP_634465.1| - 5.4e-06 25.9 0.0 0.0052 16.3 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain GerE PF00196.14 gi|21228543|ref|NP_634465.1| - 1.1e-05 24.6 0.4 0.057 12.7 0.1 2.7 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family HTH_36 PF13730.1 gi|21228543|ref|NP_634465.1| - 1.1e-05 25.4 0.7 0.023 14.8 0.1 3.3 3 0 0 3 3 3 1 Helix-turn-helix domain FaeA PF04703.7 gi|21228543|ref|NP_634465.1| - 1.2e-05 25.3 0.4 0.14 12.3 0.0 2.3 2 0 0 2 2 2 2 FaeA-like protein Penicillinase_R PF03965.11 gi|21228543|ref|NP_634465.1| - 3.6e-05 23.8 0.3 0.021 14.9 0.0 2.3 1 1 1 2 2 2 1 Penicillinase repressor MarR_2 PF12802.2 gi|21228543|ref|NP_634465.1| - 5.9e-05 22.6 0.0 0.16 11.6 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_IclR PF09339.5 gi|21228543|ref|NP_634465.1| - 0.00011 21.7 0.0 0.24 11.0 0.0 2.4 2 0 0 2 2 2 2 IclR helix-turn-helix domain HTH_38 PF13936.1 gi|21228543|ref|NP_634465.1| - 0.00014 21.3 0.1 0.064 12.8 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HrcA_DNA-bdg PF03444.10 gi|21228543|ref|NP_634465.1| - 0.00018 20.8 0.2 0.6 9.5 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TetR_N PF00440.18 gi|21228543|ref|NP_634465.1| - 0.00022 20.7 0.0 0.15 11.7 0.0 2.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Sigma70_r4 PF04545.11 gi|21228543|ref|NP_634465.1| - 0.00033 19.9 0.0 1 8.6 0.0 3.2 2 1 1 3 3 3 2 Sigma-70, region 4 HTH_23 PF13384.1 gi|21228543|ref|NP_634465.1| - 0.00042 19.8 0.0 0.083 12.5 0.0 2.6 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Tnp_IS630 PF01710.11 gi|21228543|ref|NP_634465.1| - 0.00055 19.5 0.1 0.087 12.5 0.0 2.3 1 1 1 2 2 2 1 Transposase Sigma70_r4_2 PF08281.7 gi|21228543|ref|NP_634465.1| - 0.0011 18.4 0.0 0.096 12.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_10 PF04967.7 gi|21228543|ref|NP_634465.1| - 0.0014 18.1 0.0 1.4 8.5 0.0 2.5 2 0 0 2 2 2 1 HTH DNA binding domain MerR_1 PF13411.1 gi|21228543|ref|NP_634465.1| - 0.002 17.8 0.2 0.15 11.8 0.0 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_17 PF12728.2 gi|21228543|ref|NP_634465.1| - 0.0068 16.6 0.6 0.75 10.1 0.1 2.9 3 0 0 3 3 3 1 Helix-turn-helix domain GntR PF00392.16 gi|21228543|ref|NP_634465.1| - 0.0089 15.4 0.0 0.38 10.2 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family KorB PF08535.5 gi|21228543|ref|NP_634465.1| - 0.01 15.9 0.0 0.2 11.8 0.0 2.5 3 0 0 3 3 2 0 KorB domain RepL PF05732.6 gi|21228543|ref|NP_634465.1| - 0.011 14.8 0.4 0.036 13.2 0.1 1.8 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) HTH_29 PF13551.1 gi|21228543|ref|NP_634465.1| - 0.013 15.6 0.0 5.4 7.2 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix NUMOD1 PF07453.8 gi|21228543|ref|NP_634465.1| - 0.023 14.5 4.7 2.3 8.1 0.0 3.6 4 0 0 4 4 3 0 NUMOD1 domain HTH_3 PF01381.17 gi|21228543|ref|NP_634465.1| - 0.024 14.4 0.1 0.093 12.5 0.0 2.1 2 1 1 3 3 1 0 Helix-turn-helix Crp PF00325.15 gi|21228543|ref|NP_634465.1| - 0.025 14.0 0.0 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family HTH_AsnC-type PF13404.1 gi|21228543|ref|NP_634465.1| - 0.034 13.6 0.0 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Mrr_N PF14338.1 gi|21228543|ref|NP_634465.1| - 0.039 14.0 0.0 0.071 13.2 0.0 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_45 PF14947.1 gi|21228543|ref|NP_634465.1| - 0.052 13.3 3.2 0.25 11.1 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix Fe_dep_repress PF01325.14 gi|21228543|ref|NP_634465.1| - 0.065 13.1 0.0 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF2250 PF10007.4 gi|21228543|ref|NP_634465.1| - 0.085 12.7 0.2 0.19 11.6 0.0 1.6 2 0 0 2 2 1 0 Uncharacterized protein conserved in archaea (DUF2250) Phage_CI_repr PF07022.8 gi|21228543|ref|NP_634465.1| - 0.091 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain HTH_19 PF12844.2 gi|21228543|ref|NP_634465.1| - 0.098 12.7 1.5 2.8 8.0 0.1 2.5 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_30 PF13556.1 gi|21228543|ref|NP_634465.1| - 0.12 11.9 0.0 1.7 8.2 0.0 2.4 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain BLIP PF07467.6 gi|21228544|ref|NP_634466.1| - 0.1 12.2 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase inhibitor (BLIP) CTP_transf_1 PF01148.15 gi|21228546|ref|NP_634468.1| - 0.013 15.1 5.9 0.017 14.8 4.1 1.1 1 0 0 1 1 1 0 Cytidylyltransferase family Acyl_transf_3 PF01757.17 gi|21228546|ref|NP_634468.1| - 0.02 13.7 4.6 0.024 13.4 3.2 1.1 1 0 0 1 1 1 0 Acyltransferase family Sugar_transport PF06800.7 gi|21228546|ref|NP_634468.1| - 0.034 13.2 0.2 0.034 13.2 0.2 1.7 2 0 0 2 2 2 0 Sugar transport protein AA_permease_2 PF13520.1 gi|21228546|ref|NP_634468.1| - 0.044 12.3 6.8 0.054 12.0 4.7 1.1 1 0 0 1 1 1 0 Amino acid permease Baculo_ME53 PF06061.6 gi|21228546|ref|NP_634468.1| - 0.044 12.7 1.0 0.058 12.3 0.7 1.1 1 0 0 1 1 1 0 Baculoviridae ME53 DUF1275 PF06912.6 gi|21228546|ref|NP_634468.1| - 0.069 12.3 0.3 0.11 11.7 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1275) DUF4010 PF13194.1 gi|21228546|ref|NP_634468.1| - 0.098 11.9 0.8 0.17 11.1 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4010) DUF347 PF03988.7 gi|21228546|ref|NP_634468.1| - 1.8 8.5 0.0 1.8 8.5 0.0 3.2 4 0 0 4 4 4 0 Repeat of Unknown Function (DUF347) DUF2678 PF10856.3 gi|21228546|ref|NP_634468.1| - 3.5 7.3 7.6 0.67 9.7 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) DUF1673 PF07895.6 gi|21228546|ref|NP_634468.1| - 4 6.8 11.1 4 6.9 2.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1673) DUF4191 PF13829.1 gi|21228546|ref|NP_634468.1| - 4.4 6.3 8.2 0.92 8.5 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DUF1430 PF07242.6 gi|21228546|ref|NP_634468.1| - 4.9 7.2 13.9 1.2 9.2 2.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1430) DUF3784 PF12650.2 gi|21228546|ref|NP_634468.1| - 6.9 6.6 14.0 0.062 13.2 0.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) DsbD PF02683.10 gi|21228547|ref|NP_634469.1| - 2.6e-23 82.7 21.8 3.2e-23 82.4 15.1 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.1 gi|21228547|ref|NP_634469.1| - 7.3e-11 42.1 22.4 9.9e-11 41.7 15.5 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.1 gi|21228547|ref|NP_634469.1| - 1.7e-06 27.7 0.1 1.7e-06 27.7 0.1 1.6 2 0 0 2 2 2 1 Thioredoxin domain UPF0270 PF06794.7 gi|21228547|ref|NP_634469.1| - 0.013 15.2 2.2 0.021 14.5 1.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) DUF2418 PF10332.4 gi|21228547|ref|NP_634469.1| - 0.21 11.8 1.4 2.3 8.5 0.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) DUF3980 PF13140.1 gi|21228547|ref|NP_634469.1| - 1.1 9.5 5.0 0.4 10.9 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) HTH_24 PF13412.1 gi|21228548|ref|NP_634470.1| - 4.8e-17 61.0 0.1 1.8e-09 36.8 0.1 2.7 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|21228548|ref|NP_634470.1| - 3.4e-12 45.9 0.0 2.2e-05 24.1 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.7 gi|21228548|ref|NP_634470.1| - 2.5e-08 33.4 0.1 0.0085 15.7 0.0 2.6 2 0 0 2 2 2 2 HTH domain HTH_5 PF01022.15 gi|21228548|ref|NP_634470.1| - 2.6e-08 33.3 0.0 0.0022 17.6 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_36 PF13730.1 gi|21228548|ref|NP_634470.1| - 1e-06 28.7 0.1 0.031 14.4 0.1 2.6 2 0 0 2 2 2 2 Helix-turn-helix domain TrmB PF01978.14 gi|21228548|ref|NP_634470.1| - 2.2e-06 27.2 0.0 0.0096 15.6 0.0 2.6 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|21228548|ref|NP_634470.1| - 4.7e-06 26.1 0.0 0.044 13.3 0.0 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain GerE PF00196.14 gi|21228548|ref|NP_634470.1| - 1.3e-05 24.4 0.7 0.01 15.0 0.2 2.8 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family HTH_28 PF13518.1 gi|21228548|ref|NP_634470.1| - 7.5e-05 22.6 0.3 0.04 13.9 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain FaeA PF04703.7 gi|21228548|ref|NP_634470.1| - 0.00014 21.9 0.3 0.5 10.5 0.1 2.4 2 0 0 2 2 2 2 FaeA-like protein HTH_Crp_2 PF13545.1 gi|21228548|ref|NP_634470.1| - 0.00024 20.8 0.1 0.19 11.5 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_10 PF04967.7 gi|21228548|ref|NP_634470.1| - 0.00025 20.5 0.0 1.1 8.8 0.0 2.6 2 0 0 2 2 2 2 HTH DNA binding domain RepL PF05732.6 gi|21228548|ref|NP_634470.1| - 0.00025 20.2 1.2 0.0058 15.8 0.6 2.4 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) HTH_34 PF13601.1 gi|21228548|ref|NP_634470.1| - 0.00033 20.6 0.1 0.43 10.6 0.0 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_23 PF13384.1 gi|21228548|ref|NP_634470.1| - 0.00046 19.7 0.0 1.3 8.7 0.0 2.7 2 0 0 2 2 2 2 Homeodomain-like domain MarR_2 PF12802.2 gi|21228548|ref|NP_634470.1| - 0.00059 19.4 0.0 0.89 9.2 0.0 2.3 2 0 0 2 2 2 2 MarR family Penicillinase_R PF03965.11 gi|21228548|ref|NP_634470.1| - 0.0014 18.7 0.3 0.054 13.5 0.0 2.5 1 1 1 2 2 2 1 Penicillinase repressor MarR PF01047.17 gi|21228548|ref|NP_634470.1| - 0.0019 17.8 0.0 0.41 10.3 0.0 2.6 2 1 0 2 2 2 1 MarR family TetR_N PF00440.18 gi|21228548|ref|NP_634470.1| - 0.0023 17.5 0.0 0.45 10.2 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_45 PF14947.1 gi|21228548|ref|NP_634470.1| - 0.0026 17.5 1.1 0.14 12.0 0.1 3.1 2 1 1 3 3 3 1 Winged helix-turn-helix HTH_41 PF14502.1 gi|21228548|ref|NP_634470.1| - 0.0035 16.9 0.0 0.27 10.8 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.15 gi|21228548|ref|NP_634470.1| - 0.0036 17.3 0.1 5.1 7.2 0.0 3.3 3 1 0 3 3 3 0 Transcriptional regulator HTH_Tnp_IS630 PF01710.11 gi|21228548|ref|NP_634470.1| - 0.01 15.5 0.2 0.21 11.2 0.0 2.4 1 1 1 2 2 2 1 Transposase Sigma70_r4_2 PF08281.7 gi|21228548|ref|NP_634470.1| - 0.013 14.9 0.0 1.4 8.4 0.0 2.7 2 0 0 2 2 2 0 Sigma-70, region 4 Phage_CI_repr PF07022.8 gi|21228548|ref|NP_634470.1| - 0.013 15.5 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain MerR_1 PF13411.1 gi|21228548|ref|NP_634470.1| - 0.014 15.1 0.4 4.1 7.2 0.1 2.4 2 0 0 2 2 2 0 MerR HTH family regulatory protein HTH_29 PF13551.1 gi|21228548|ref|NP_634470.1| - 0.015 15.4 0.0 2.1 8.5 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn helix HTH_AsnC-type PF13404.1 gi|21228548|ref|NP_634470.1| - 0.021 14.3 0.0 3.6 7.2 0.0 2.4 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain GH97_C PF14509.1 gi|21228548|ref|NP_634470.1| - 0.027 14.5 0.3 0.39 10.8 0.1 2.2 1 1 1 2 2 2 0 Glycosyl-hydrolase 97 C-terminal, oligomerisation B-block_TFIIIC PF04182.7 gi|21228548|ref|NP_634470.1| - 0.064 13.1 2.8 7.9 6.4 0.0 3.3 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC HTH_38 PF13936.1 gi|21228548|ref|NP_634470.1| - 0.067 12.7 0.0 3.7 7.1 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|21228548|ref|NP_634470.1| - 0.092 12.6 0.0 0.54 10.2 0.0 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_30 PF13556.1 gi|21228548|ref|NP_634470.1| - 0.11 12.1 0.0 0.87 9.2 0.0 2.1 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain NUMOD1 PF07453.8 gi|21228548|ref|NP_634470.1| - 0.12 12.3 2.1 21 5.1 0.0 3.7 4 0 0 4 4 4 0 NUMOD1 domain Sulfolobus_pRN PF05584.6 gi|21228548|ref|NP_634470.1| - 0.16 11.9 3.8 2.1 8.4 0.0 3.2 3 1 1 4 4 3 0 Sulfolobus plasmid regulatory protein HTH_29 PF13551.1 gi|21228549|ref|NP_634471.1| - 1.1e-21 77.0 0.3 1.6e-21 76.5 0.2 1.2 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.1 gi|21228549|ref|NP_634471.1| - 5.9e-13 48.0 0.9 9.2e-13 47.4 0.1 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_32 PF13565.1 gi|21228549|ref|NP_634471.1| - 5.3e-12 46.3 0.7 1.3e-10 41.9 0.1 2.2 1 1 1 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21228549|ref|NP_634471.1| - 2.6e-08 33.6 0.1 6e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|21228549|ref|NP_634471.1| - 4.4e-05 23.1 2.1 0.022 14.4 0.3 2.3 1 1 1 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_7 PF02796.10 gi|21228549|ref|NP_634471.1| - 0.0044 16.8 0.3 0.022 14.6 0.1 2.3 1 1 1 2 2 2 1 Helix-turn-helix domain of resolvase HTH_38 PF13936.1 gi|21228549|ref|NP_634471.1| - 0.0066 15.9 0.1 0.02 14.4 0.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain TF_AP-2 PF03299.9 gi|21228549|ref|NP_634471.1| - 0.037 13.5 1.1 0.15 11.6 0.1 1.9 2 0 0 2 2 2 0 Transcription factor AP-2 TRM13 PF05206.9 gi|21228549|ref|NP_634471.1| - 0.039 13.1 0.3 0.051 12.8 0.2 1.2 1 0 0 1 1 1 0 Methyltransferase TRM13 PAX PF00292.13 gi|21228549|ref|NP_634471.1| - 0.041 13.5 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 'Paired box' domain GerE PF00196.14 gi|21228549|ref|NP_634471.1| - 0.046 13.0 0.1 0.086 12.1 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_5 PF01022.15 gi|21228549|ref|NP_634471.1| - 0.067 12.8 0.0 0.16 11.6 0.0 1.6 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.11 gi|21228549|ref|NP_634471.1| - 0.083 12.2 0.2 0.81 9.0 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 DDE_3 PF13358.1 gi|21228550|ref|NP_634472.1| - 2.5e-20 72.7 0.1 3.3e-20 72.3 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF3228 PF11539.3 gi|21228550|ref|NP_634472.1| - 0.0033 16.5 0.2 0.0052 15.9 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) rve PF00665.21 gi|21228550|ref|NP_634472.1| - 0.0042 17.1 0.0 0.0079 16.2 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain Transposase_mut PF00872.13 gi|21228552|ref|NP_634474.1| - 3.5e-114 381.3 1.8 4.4e-114 380.9 1.2 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|21228552|ref|NP_634474.1| - 1.2e-13 50.9 0.0 4.7e-13 49.1 0.0 2.0 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|21228552|ref|NP_634474.1| - 1.2e-05 25.0 2.4 0.0033 17.0 0.1 2.3 1 1 1 2 2 2 2 Transposase DDE_Tnp_IS240 PF13610.1 gi|21228552|ref|NP_634474.1| - 0.0016 18.4 3.4 0.068 13.1 2.1 2.6 1 1 1 2 2 2 1 DDE domain HipA_C PF07804.7 gi|21228552|ref|NP_634474.1| - 0.049 13.7 0.1 0.72 10.0 0.1 2.6 2 0 0 2 2 2 0 HipA-like C-terminal domain DUF3108 PF11306.3 gi|21228553|ref|NP_634475.1| - 0.061 12.9 0.6 0.078 12.6 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3108) DsbD PF02683.10 gi|21228554|ref|NP_634476.1| - 5e-13 49.1 11.7 5e-13 49.1 8.1 1.5 2 0 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.1 gi|21228554|ref|NP_634476.1| - 2.5e-12 46.4 0.3 2.5e-12 46.4 0.2 1.5 2 0 0 2 2 2 1 Thioredoxin domain DsbD_2 PF13386.1 gi|21228554|ref|NP_634476.1| - 1.2e-06 28.4 11.1 2.1e-06 27.6 7.7 1.4 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF836 PF05768.9 gi|21228554|ref|NP_634476.1| - 0.0068 16.6 0.3 0.011 15.9 0.2 1.5 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin PF00085.15 gi|21228554|ref|NP_634476.1| - 0.008 15.8 0.1 0.013 15.1 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin UPF0270 PF06794.7 gi|21228554|ref|NP_634476.1| - 0.012 15.3 2.2 0.02 14.6 1.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) Glutaredoxin PF00462.19 gi|21228554|ref|NP_634476.1| - 0.033 14.1 0.5 0.063 13.2 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin DUF2418 PF10332.4 gi|21228554|ref|NP_634476.1| - 0.15 12.4 1.0 2.4 8.5 0.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) DUF4131 PF13567.1 gi|21228554|ref|NP_634476.1| - 2.6 7.4 8.1 5.8 6.2 1.9 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Yip1 PF04893.12 gi|21228555|ref|NP_634477.1| - 1.2e-33 115.9 16.5 1.5e-33 115.6 11.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|21228555|ref|NP_634477.1| - 1.7e-05 24.5 17.0 0.00019 21.1 11.7 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) DUF4181 PF13789.1 gi|21228555|ref|NP_634477.1| - 1.2 9.1 11.6 0.73 9.7 3.2 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4181) DUF2937 PF11157.3 gi|21228555|ref|NP_634477.1| - 3.7 6.8 5.8 3.8 6.8 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) ABC2_membrane PF01061.19 gi|21228556|ref|NP_634478.1| - 3.2e-36 124.4 24.2 3.2e-36 124.4 16.8 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21228556|ref|NP_634478.1| - 8.2e-16 57.9 33.1 1e-15 57.6 22.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|21228556|ref|NP_634478.1| - 1.8e-07 30.3 23.1 3.5e-07 29.3 16.0 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21228556|ref|NP_634478.1| - 1.5e-06 27.5 28.2 1.7e-06 27.4 19.2 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.22 gi|21228557|ref|NP_634479.1| - 1.2e-32 113.0 0.0 2e-32 112.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228557|ref|NP_634479.1| - 6.7e-14 52.5 1.6 1.4e-11 44.9 0.3 2.5 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|21228557|ref|NP_634479.1| - 1.4e-05 24.3 0.0 0.0062 15.6 0.0 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|21228557|ref|NP_634479.1| - 2.3e-05 24.8 0.0 3.4e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|21228557|ref|NP_634479.1| - 2.5e-05 24.6 0.0 5.6e-05 23.5 0.0 1.6 2 0 0 2 2 1 1 Domain of unknown function (DUF4162) AAA_29 PF13555.1 gi|21228557|ref|NP_634479.1| - 2.9e-05 23.5 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|21228557|ref|NP_634479.1| - 0.0013 18.2 0.0 1.1 8.6 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DUF258 PF03193.11 gi|21228557|ref|NP_634479.1| - 0.012 14.7 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|21228557|ref|NP_634479.1| - 0.035 13.3 0.0 2.1 7.4 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Chordopox_L2 PF05803.7 gi|21228557|ref|NP_634479.1| - 0.048 13.2 0.0 0.53 9.9 0.0 2.2 2 0 0 2 2 2 0 Chordopoxvirus L2 protein AAA PF00004.24 gi|21228557|ref|NP_634479.1| - 0.051 13.7 0.0 0.54 10.4 0.0 2.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.17 gi|21228557|ref|NP_634479.1| - 0.054 12.9 0.0 0.28 10.6 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_22 PF13401.1 gi|21228557|ref|NP_634479.1| - 0.082 13.0 0.1 0.31 11.1 0.1 1.9 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|21228557|ref|NP_634479.1| - 0.097 12.6 0.6 0.36 10.7 0.4 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.22 gi|21228558|ref|NP_634480.1| - 1.5e-54 183.9 0.0 1.2e-28 100.1 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.7 gi|21228558|ref|NP_634480.1| - 6.8e-21 74.3 0.0 7.6e-18 64.6 0.0 2.4 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|21228558|ref|NP_634480.1| - 1.6e-18 67.6 0.2 1.3e-05 25.3 0.0 4.1 3 1 0 3 3 3 3 AAA domain SMC_N PF02463.14 gi|21228558|ref|NP_634480.1| - 1.1e-16 60.7 0.1 2e-08 33.7 0.0 2.9 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|21228558|ref|NP_634480.1| - 5.9e-13 49.1 1.3 1.1e-05 25.5 0.2 3.7 2 2 0 2 2 2 2 AAA domain AAA_25 PF13481.1 gi|21228558|ref|NP_634480.1| - 3.2e-10 39.7 0.1 0.00064 19.1 0.0 3.5 3 1 0 3 3 3 2 AAA domain AAA_29 PF13555.1 gi|21228558|ref|NP_634480.1| - 1.2e-08 34.3 0.1 0.001 18.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MobB PF03205.9 gi|21228558|ref|NP_634480.1| - 1.5e-07 31.1 0.1 0.0021 17.7 0.0 2.4 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|21228558|ref|NP_634480.1| - 5.7e-07 29.6 1.2 0.012 15.6 0.0 2.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_17 PF13207.1 gi|21228558|ref|NP_634480.1| - 5.9e-07 30.3 0.0 0.0066 17.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|21228558|ref|NP_634480.1| - 6.4e-07 29.7 0.0 0.029 14.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain NACHT PF05729.7 gi|21228558|ref|NP_634480.1| - 1.9e-06 27.6 0.2 0.05 13.2 0.0 3.1 4 0 0 4 4 3 2 NACHT domain AAA PF00004.24 gi|21228558|ref|NP_634480.1| - 2.1e-06 27.9 0.7 0.033 14.3 0.0 3.9 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.2 gi|21228558|ref|NP_634480.1| - 3.1e-06 26.8 4.0 0.05 13.0 0.1 4.0 3 1 1 4 4 4 1 AAA-like domain DUF258 PF03193.11 gi|21228558|ref|NP_634480.1| - 4.1e-06 26.0 0.2 0.015 14.5 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|21228558|ref|NP_634480.1| - 5.2e-06 26.9 0.1 0.11 12.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 gi|21228558|ref|NP_634480.1| - 6.6e-06 25.6 0.8 0.36 10.2 0.0 4.0 4 0 0 4 4 4 1 IstB-like ATP binding protein AAA_33 PF13671.1 gi|21228558|ref|NP_634480.1| - 6.9e-06 25.9 0.0 0.061 13.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain DUF87 PF01935.12 gi|21228558|ref|NP_634480.1| - 1.1e-05 25.4 0.5 0.0038 17.0 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function DUF87 KaiC PF06745.8 gi|21228558|ref|NP_634480.1| - 2e-05 23.8 2.0 2.1 7.4 0.1 3.2 3 0 0 3 3 3 2 KaiC AAA_19 PF13245.1 gi|21228558|ref|NP_634480.1| - 2.2e-05 24.1 0.7 0.038 13.7 0.0 2.9 3 0 0 3 3 2 1 Part of AAA domain T2SE PF00437.15 gi|21228558|ref|NP_634480.1| - 2.6e-05 23.2 0.1 0.015 14.2 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein APS_kinase PF01583.15 gi|21228558|ref|NP_634480.1| - 3.6e-05 23.4 0.0 0.056 13.1 0.0 2.4 2 0 0 2 2 2 2 Adenylylsulphate kinase NB-ARC PF00931.17 gi|21228558|ref|NP_634480.1| - 4.1e-05 22.5 0.6 0.25 10.1 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_5 PF07728.9 gi|21228558|ref|NP_634480.1| - 6.2e-05 22.7 0.1 0.56 9.9 0.0 3.3 4 0 0 4 4 3 2 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.13 gi|21228558|ref|NP_634480.1| - 0.00011 21.7 0.1 0.065 12.7 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family Mg_chelatase PF01078.16 gi|21228558|ref|NP_634480.1| - 0.00013 21.2 0.0 0.29 10.2 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI DEAD PF00270.24 gi|21228558|ref|NP_634480.1| - 0.00017 21.1 0.0 0.56 9.6 0.0 3.1 2 2 0 2 2 2 1 DEAD/DEAH box helicase PRK PF00485.13 gi|21228558|ref|NP_634480.1| - 0.00017 21.2 0.0 0.071 12.6 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family UPF0079 PF02367.12 gi|21228558|ref|NP_634480.1| - 0.0007 19.2 0.1 1.2 8.7 0.0 2.7 2 1 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Zeta_toxin PF06414.7 gi|21228558|ref|NP_634480.1| - 0.00073 18.6 0.1 0.092 11.8 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin AAA_14 PF13173.1 gi|21228558|ref|NP_634480.1| - 0.00082 19.2 0.1 1.5 8.6 0.0 3.8 3 1 0 4 4 4 1 AAA domain AAA_31 PF13614.1 gi|21228558|ref|NP_634480.1| - 0.00087 19.2 0.0 0.053 13.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.10 gi|21228558|ref|NP_634480.1| - 0.0012 18.5 1.5 1.6 8.4 0.1 3.0 3 0 0 3 3 3 2 NTPase PhoH PF02562.11 gi|21228558|ref|NP_634480.1| - 0.0012 18.0 0.0 1.4 8.1 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein RNA_helicase PF00910.17 gi|21228558|ref|NP_634480.1| - 0.0024 18.0 0.0 0.65 10.1 0.0 2.5 2 0 0 2 2 2 1 RNA helicase ATP-synt_ab PF00006.20 gi|21228558|ref|NP_634480.1| - 0.0029 17.1 0.1 1.2 8.5 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain SRP54 PF00448.17 gi|21228558|ref|NP_634480.1| - 0.003 17.0 0.5 0.089 12.2 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Sigma54_activat PF00158.21 gi|21228558|ref|NP_634480.1| - 0.0042 16.5 0.2 1.5 8.2 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain Pox_A32 PF04665.7 gi|21228558|ref|NP_634480.1| - 0.0057 15.9 0.1 2 7.6 0.0 2.4 2 0 0 2 2 2 1 Poxvirus A32 protein CbiA PF01656.18 gi|21228558|ref|NP_634480.1| - 0.0058 16.0 0.5 0.91 8.8 0.1 2.5 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_15 PF13175.1 gi|21228558|ref|NP_634480.1| - 0.006 15.6 0.0 9.7 5.1 0.0 3.2 3 0 0 3 3 3 0 AAA ATPase domain AAA_30 PF13604.1 gi|21228558|ref|NP_634480.1| - 0.0061 16.1 0.1 1.1 8.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain ResIII PF04851.10 gi|21228558|ref|NP_634480.1| - 0.0095 15.7 0.0 3.9 7.2 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit MMR_HSR1 PF01926.18 gi|21228558|ref|NP_634480.1| - 0.011 15.6 0.1 0.87 9.5 0.0 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase ABC_ATPase PF09818.4 gi|21228558|ref|NP_634480.1| - 0.013 14.1 4.6 6 5.3 0.0 4.3 4 1 0 4 4 4 0 Predicted ATPase of the ABC class Miro PF08477.8 gi|21228558|ref|NP_634480.1| - 0.015 15.8 0.1 3.2 8.2 0.0 2.3 2 0 0 2 2 2 0 Miro-like protein SbcCD_C PF13558.1 gi|21228558|ref|NP_634480.1| - 0.016 15.1 1.7 7.4 6.5 0.1 3.2 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF2075 PF09848.4 gi|21228558|ref|NP_634480.1| - 0.023 13.6 0.1 1.3 7.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.1 gi|21228558|ref|NP_634480.1| - 0.032 13.8 0.3 7.5 6.0 0.1 2.4 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.12 gi|21228558|ref|NP_634480.1| - 0.033 13.7 0.5 3.9 6.9 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TIP49 PF06068.8 gi|21228558|ref|NP_634480.1| - 0.067 11.8 0.1 1.8 7.1 0.0 2.2 2 0 0 2 2 2 0 TIP49 C-terminus Sigma54_activ_2 PF14532.1 gi|21228558|ref|NP_634480.1| - 0.078 13.0 0.4 4.8 7.2 0.0 2.8 2 1 1 3 3 2 0 Sigma-54 interaction domain TrwB_AAD_bind PF10412.4 gi|21228558|ref|NP_634480.1| - 0.079 11.5 0.1 2.7 6.5 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain RecA PF00154.16 gi|21228558|ref|NP_634480.1| - 0.09 11.8 0.6 2.4 7.1 0.1 2.4 2 0 0 2 2 2 0 recA bacterial DNA recombination protein cobW PF02492.14 gi|21228558|ref|NP_634480.1| - 0.098 12.0 1.0 6.8 6.0 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Thymidylate_kin PF02223.12 gi|21228558|ref|NP_634480.1| - 0.15 11.3 0.0 5.6 6.3 0.0 2.3 2 0 0 2 2 2 0 Thymidylate kinase DUF927 PF06048.6 gi|21228558|ref|NP_634480.1| - 0.17 11.1 0.1 18 4.5 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF927) BPD_transp_1 PF00528.17 gi|21228559|ref|NP_634481.1| - 2e-26 92.6 11.5 2e-26 92.6 8.0 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|21228559|ref|NP_634481.1| - 0.00051 19.3 0.5 0.00051 19.3 0.4 3.6 3 1 1 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C FtsX PF02687.16 gi|21228559|ref|NP_634481.1| - 0.056 13.2 19.4 0.4 10.4 1.2 3.3 3 0 0 3 3 3 0 FtsX-like permease family BPD_transp_1 PF00528.17 gi|21228560|ref|NP_634482.1| - 5.9e-39 133.4 11.1 5.9e-39 133.4 7.7 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Claudin_2 PF13903.1 gi|21228560|ref|NP_634482.1| - 2.4 7.8 8.8 0.31 10.6 0.1 2.9 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction Methyltransf_18 PF12847.2 gi|21228561|ref|NP_634483.1| - 2.4e-12 47.4 0.0 8.7e-12 45.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228561|ref|NP_634483.1| - 1.6e-11 43.9 0.0 2.4e-11 43.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21228561|ref|NP_634483.1| - 5.5e-10 39.6 0.0 1e-09 38.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228561|ref|NP_634483.1| - 5.6e-09 35.9 0.0 9.8e-09 35.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228561|ref|NP_634483.1| - 9.7e-09 35.5 0.0 2.5e-08 34.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|21228561|ref|NP_634483.1| - 3.5e-08 32.8 0.0 5.6e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.7 gi|21228561|ref|NP_634483.1| - 2.4e-07 31.1 0.0 5.5e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21228561|ref|NP_634483.1| - 6.5e-07 28.6 0.0 8.9e-07 28.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.9 gi|21228561|ref|NP_634483.1| - 1.1e-06 28.1 0.0 1.6e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.6 gi|21228561|ref|NP_634483.1| - 8.6e-06 25.2 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_26 PF13659.1 gi|21228561|ref|NP_634483.1| - 4.9e-05 23.3 0.0 7.6e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|21228561|ref|NP_634483.1| - 5.4e-05 22.4 0.0 8.2e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.15 gi|21228561|ref|NP_634483.1| - 0.00017 20.7 0.0 0.00021 20.4 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.14 gi|21228561|ref|NP_634483.1| - 0.00031 20.8 0.0 0.00057 19.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase Ubie_methyltran PF01209.13 gi|21228561|ref|NP_634483.1| - 0.00038 19.6 0.0 0.00067 18.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DREV PF05219.7 gi|21228561|ref|NP_634483.1| - 0.0027 16.6 0.0 0.0044 15.9 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.7 gi|21228561|ref|NP_634483.1| - 0.01 15.2 0.0 0.025 13.9 0.0 1.7 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW FmrO PF07091.6 gi|21228561|ref|NP_634483.1| - 0.02 13.9 0.0 0.029 13.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) SBP_bac_5 PF00496.17 gi|21228562|ref|NP_634484.1| - 1.1e-87 294.3 0.1 1.3e-87 294.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC2_membrane_4 PF12730.2 gi|21228563|ref|NP_634485.1| - 0.11 11.6 9.1 0.13 11.4 6.3 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4083 PF13314.1 gi|21228563|ref|NP_634485.1| - 5.6 6.8 6.4 0.72 9.7 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF4018 PF13210.1 gi|21228563|ref|NP_634485.1| - 5.8 6.2 7.6 63 2.8 5.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4018) EPV_E5 PF08135.6 gi|21228563|ref|NP_634485.1| - 8.3 6.4 7.2 1.6 8.7 0.9 2.0 2 0 0 2 2 2 0 Major transforming protein E5 family Ribosomal_S6e PF01092.14 gi|21228564|ref|NP_634486.1| - 9.6e-35 119.0 0.4 1.1e-34 118.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.22 gi|21228565|ref|NP_634487.1| - 9.2e-33 113.2 0.3 2.2e-31 108.7 0.2 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|21228565|ref|NP_634487.1| - 2.6e-24 85.2 0.7 2.6e-24 85.2 0.5 2.8 3 0 0 3 3 3 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 gi|21228565|ref|NP_634487.1| - 2.7e-15 55.7 5.6 5.9e-15 54.6 2.5 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.20 gi|21228565|ref|NP_634487.1| - 9e-14 51.3 6.1 1.8e-10 40.7 0.1 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|21228565|ref|NP_634487.1| - 1.5e-07 31.3 0.0 3.4e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.12 gi|21228565|ref|NP_634487.1| - 0.0011 18.5 0.0 0.0037 16.8 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Miro PF08477.8 gi|21228565|ref|NP_634487.1| - 0.0034 17.8 0.0 0.012 16.0 0.0 2.0 2 0 0 2 2 2 1 Miro-like protein PduV-EutP PF10662.4 gi|21228565|ref|NP_634487.1| - 0.0093 15.4 0.0 0.21 11.0 0.0 2.6 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MobB PF03205.9 gi|21228565|ref|NP_634487.1| - 0.035 13.8 0.3 0.17 11.6 0.1 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Dynamin_N PF00350.18 gi|21228565|ref|NP_634487.1| - 0.044 13.6 0.6 0.97 9.2 0.0 2.6 3 0 0 3 3 3 0 Dynamin family NUC173 PF08161.7 gi|21228565|ref|NP_634487.1| - 0.11 11.8 0.0 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 NUC173 domain DUF1908 PF08926.6 gi|21228565|ref|NP_634487.1| - 0.14 10.9 0.0 0.22 10.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) NDK PF00334.14 gi|21228566|ref|NP_634488.1| - 8.3e-56 187.5 0.0 9.5e-56 187.3 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.15 gi|21228567|ref|NP_634489.1| - 1.1e-19 70.0 0.6 1.1e-19 70.0 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.8 gi|21228567|ref|NP_634489.1| - 0.0019 18.0 1.5 0.0025 17.6 1.0 1.2 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.9 gi|21228567|ref|NP_634489.1| - 0.0036 16.9 4.3 0.0051 16.4 3.0 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Ribosomal_S28e PF01200.13 gi|21228568|ref|NP_634490.1| - 7.9e-29 99.2 0.5 8.4e-29 99.1 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.21 gi|21228569|ref|NP_634491.1| - 4.6e-26 90.1 0.8 5.4e-26 89.9 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.1 gi|21228569|ref|NP_634491.1| - 0.032 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 PELOTA RNA binding domain eRF1_3 PF03465.10 gi|21228569|ref|NP_634491.1| - 0.11 12.7 0.1 0.13 12.5 0.0 1.3 1 1 0 1 1 1 0 eRF1 domain 3 Radical_SAM PF04055.16 gi|21228570|ref|NP_634492.1| - 3.8e-20 72.7 0.1 4.5e-20 72.4 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|21228570|ref|NP_634492.1| - 5.7e-08 32.7 0.0 1.1e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21228570|ref|NP_634492.1| - 4.1e-05 23.7 0.0 0.00017 21.7 0.0 1.8 1 1 1 2 2 2 1 4Fe-4S single cluster domain WD40 PF00400.27 gi|21228571|ref|NP_634493.1| - 1.9e-32 109.9 12.1 0.0008 19.1 0.0 8.4 8 0 0 8 8 8 7 WD domain, G-beta repeat PQQ_3 PF13570.1 gi|21228571|ref|NP_634493.1| - 6.7e-23 80.2 25.8 1.6e-06 28.1 0.1 8.6 8 1 1 9 9 9 4 PQQ-like domain PQQ_2 PF13360.1 gi|21228571|ref|NP_634493.1| - 8.5e-22 77.7 10.9 1e-10 41.4 0.7 3.2 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.16 gi|21228571|ref|NP_634493.1| - 2.1e-18 64.8 17.5 0.00031 20.1 0.1 7.2 7 0 0 7 7 7 5 PQQ enzyme repeat eIF2A PF08662.6 gi|21228571|ref|NP_634493.1| - 0.00049 19.8 0.3 0.034 13.8 0.0 3.0 1 1 2 3 3 3 1 Eukaryotic translation initiation factor eIF2A HPS3_N PF14761.1 gi|21228571|ref|NP_634493.1| - 0.0089 15.4 0.0 0.068 12.5 0.0 2.2 2 0 0 2 2 2 1 Hermansky-Pudlak syndrome 3 Cytochrom_D1 PF02239.11 gi|21228571|ref|NP_634493.1| - 0.083 11.1 3.9 0.07 11.4 0.2 2.5 2 1 1 3 3 3 0 Cytochrome D1 heme domain VCBS PF13517.1 gi|21228571|ref|NP_634493.1| - 5 7.5 10.9 15 6.0 0.2 4.5 1 1 3 4 4 4 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella PKD PF00801.15 gi|21228572|ref|NP_634494.1| - 3.3e-201 651.4 128.2 2.4e-20 72.0 2.9 12.9 13 0 0 13 13 13 12 PKD domain Lactonase PF10282.4 gi|21228572|ref|NP_634494.1| - 8.6e-32 110.5 19.4 4.5e-08 32.5 0.3 8.2 5 2 5 10 10 10 6 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21228572|ref|NP_634494.1| - 4.1e-22 77.9 12.8 2.2e-06 26.2 0.2 5.5 2 2 3 6 6 6 5 Cytochrome D1 heme domain NHL PF01436.16 gi|21228572|ref|NP_634494.1| - 1.7e-14 52.8 25.9 0.58 10.2 0.0 12.1 12 0 0 12 12 12 4 NHL repeat Arylesterase PF01731.15 gi|21228572|ref|NP_634494.1| - 1e-13 51.0 22.0 0.21 11.6 0.0 12.3 5 2 8 13 13 13 4 Arylesterase PD40 PF07676.7 gi|21228572|ref|NP_634494.1| - 5.4e-09 35.5 3.8 5.3 6.8 0.0 9.9 10 0 0 10 10 10 1 WD40-like Beta Propeller Repeat SBP56 PF05694.6 gi|21228572|ref|NP_634494.1| - 3.2e-07 29.2 0.1 1.5 7.2 0.0 6.2 4 2 3 7 7 7 3 56kDa selenium binding protein (SBP56) Str_synth PF03088.11 gi|21228572|ref|NP_634494.1| - 4.1e-05 23.5 0.9 37 4.4 0.0 7.7 7 2 1 9 9 9 0 Strictosidine synthase P_proprotein PF01483.15 gi|21228572|ref|NP_634494.1| - 0.041 13.6 1.8 62 3.4 0.0 5.9 6 0 0 6 6 6 0 Proprotein convertase P-domain NosD PF05048.8 gi|21228573|ref|NP_634495.1| - 4.7e-66 222.3 46.1 8.9e-57 191.9 22.4 3.0 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21228573|ref|NP_634495.1| - 3.4e-35 121.1 79.1 2.5e-15 56.5 21.1 3.1 1 1 2 3 3 3 3 Right handed beta helix region NTP_transf_2 PF01909.18 gi|21228574|ref|NP_634496.1| - 4.3e-11 42.9 3.2 1.6e-09 37.9 2.2 2.1 1 1 0 1 1 1 1 Nucleotidyltransferase domain Adenyl_cycl_N PF12633.2 gi|21228574|ref|NP_634496.1| - 0.13 11.7 0.0 0.86 9.0 0.0 2.0 1 1 1 2 2 2 0 Adenylate cyclase NT domain DUF86 PF01934.12 gi|21228575|ref|NP_634497.1| - 1e-24 86.4 0.0 1.1e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Acetyltransf_3 PF13302.1 gi|21228576|ref|NP_634498.1| - 5.6e-24 84.9 0.0 6.5e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21228576|ref|NP_634498.1| - 1.5e-17 63.9 0.2 1.6e-17 63.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228576|ref|NP_634498.1| - 3e-06 27.1 0.1 4.4e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_8 PF13523.1 gi|21228576|ref|NP_634498.1| - 8.2e-06 25.7 0.0 1.1e-05 25.4 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF217 PF02697.9 gi|21228577|ref|NP_634499.1| - 5.3e-21 74.6 2.5 5.9e-21 74.5 1.7 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 PA28_beta PF02252.13 gi|21228577|ref|NP_634499.1| - 0.021 14.2 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit RHH_1 PF01402.16 gi|21228577|ref|NP_634499.1| - 0.19 11.6 1.9 0.32 10.9 0.1 2.2 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Acetyltransf_3 PF13302.1 gi|21228578|ref|NP_634500.1| - 1.2e-14 54.6 0.1 1.4e-14 54.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21228578|ref|NP_634500.1| - 5.2e-12 45.9 0.2 5.8e-12 45.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21228578|ref|NP_634500.1| - 2.9e-05 23.9 0.0 3.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228578|ref|NP_634500.1| - 0.0073 16.3 0.0 0.0086 16.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family NPCBM_assoc PF10633.4 gi|21228579|ref|NP_634501.1| - 0.0016 18.4 0.6 0.0034 17.3 0.2 1.6 2 0 0 2 2 2 1 NPCBM-associated, NEW3 domain of alpha-galactosidase NUMOD1 PF07453.8 gi|21228579|ref|NP_634501.1| - 0.027 14.2 0.3 0.16 11.8 0.1 2.1 2 0 0 2 2 2 0 NUMOD1 domain VWA PF00092.23 gi|21228580|ref|NP_634502.1| - 1.3e-26 93.4 0.1 3.6e-26 91.9 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.1 gi|21228580|ref|NP_634502.1| - 1.9e-26 93.2 0.5 6.2e-26 91.5 0.0 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain CHAP PF05257.11 gi|21228580|ref|NP_634502.1| - 2.4e-26 91.8 3.6 8.2e-26 90.1 2.5 1.9 1 0 0 1 1 1 1 CHAP domain VWA_3 PF13768.1 gi|21228580|ref|NP_634502.1| - 5.9e-12 45.5 0.0 1e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF1973 PF09315.6 gi|21228580|ref|NP_634502.1| - 5.4e-05 22.6 0.6 0.00012 21.5 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1973) Big_3_4 PF13754.1 gi|21228580|ref|NP_634502.1| - 0.00016 21.9 0.3 0.00016 21.9 0.2 6.3 6 2 1 7 7 6 1 Bacterial Ig-like domain (group 3) CobT_C PF11775.3 gi|21228580|ref|NP_634502.1| - 0.00056 19.3 0.0 0.0012 18.2 0.0 1.6 1 0 0 1 1 1 1 Cobalamin biosynthesis protein CobT VWA domain fn3 PF00041.16 gi|21228580|ref|NP_634502.1| - 0.003 17.6 2.6 0.94 9.6 0.0 3.6 3 0 0 3 3 3 2 Fibronectin type III domain DUF4625 PF15418.1 gi|21228580|ref|NP_634502.1| - 0.0082 16.2 0.8 12 6.0 0.0 4.4 3 2 2 5 5 5 1 Domain of unknown function (DUF4625) vWA-TerF-like PF10138.4 gi|21228580|ref|NP_634502.1| - 0.017 14.9 0.0 0.062 13.1 0.0 1.9 1 1 0 1 1 1 0 vWA found in TerF C terminus VWA_CoxE PF05762.9 gi|21228580|ref|NP_634502.1| - 0.12 11.5 0.0 0.24 10.5 0.0 1.4 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein FpoO PF10621.4 gi|21228581|ref|NP_634503.1| - 2.4e-62 208.3 1.5 2.9e-62 208.0 1.1 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO FYVE PF01363.16 gi|21228581|ref|NP_634503.1| - 0.019 14.8 2.7 0.43 10.5 1.9 2.3 1 1 0 1 1 1 0 FYVE zinc finger DUF2527 PF10736.4 gi|21228581|ref|NP_634503.1| - 0.055 13.1 0.2 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF4428 PF14471.1 gi|21228581|ref|NP_634503.1| - 0.11 12.2 10.5 0.27 11.0 1.0 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) zf-AD PF07776.10 gi|21228581|ref|NP_634503.1| - 1.2 9.1 5.7 24 5.0 0.1 2.4 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) C1_2 PF03107.11 gi|21228581|ref|NP_634503.1| - 4.8 7.3 9.4 9.4 6.4 0.1 4.0 4 0 0 4 4 4 0 C1 domain Oxidored_q1 PF00361.15 gi|21228582|ref|NP_634504.1| - 3.7e-63 213.3 19.9 3.7e-63 213.3 13.8 2.5 2 0 0 2 2 2 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|21228582|ref|NP_634504.1| - 0.29 10.7 7.8 0.033 13.7 1.7 2.3 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1 PF00361.15 gi|21228583|ref|NP_634505.1| - 8.8e-64 215.3 26.5 8.8e-64 215.3 18.3 2.1 2 0 0 2 2 2 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q5_N PF01059.12 gi|21228583|ref|NP_634505.1| - 0.013 15.3 5.2 0.013 15.3 3.6 4.6 4 1 0 5 5 5 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus 4HB_MCP_1 PF12729.2 gi|21228583|ref|NP_634505.1| - 2.9 7.2 4.8 0.58 9.4 0.2 2.3 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction Oxidored_q1 PF00361.15 gi|21228584|ref|NP_634506.1| - 3.7e-73 246.1 17.1 3.7e-73 246.1 11.8 3.5 4 1 0 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|21228584|ref|NP_634506.1| - 6.6e-13 48.0 1.8 6.6e-13 48.0 1.3 2.7 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q1_C PF01010.14 gi|21228584|ref|NP_634506.1| - 0.017 14.6 6.3 0.25 10.8 4.3 2.5 1 1 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q2 PF00420.19 gi|21228585|ref|NP_634507.1| - 1e-25 89.1 6.3 1.2e-25 88.9 4.4 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Oxidored_q1_C PF01010.14 gi|21228585|ref|NP_634507.1| - 0.17 11.3 1.5 0.2 11.1 1.0 1.0 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus Oxidored_q3 PF00499.15 gi|21228586|ref|NP_634508.1| - 0.00052 19.8 1.5 0.00063 19.5 1.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PepSY_TM PF03929.11 gi|21228586|ref|NP_634508.1| - 0.16 12.4 4.4 0.18 12.2 0.2 2.3 2 0 0 2 2 2 0 PepSY-associated TM helix Oxidored_q3 PF00499.15 gi|21228587|ref|NP_634509.1| - 1.7e-15 57.0 10.9 2.2e-15 56.7 7.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4040 PF13244.1 gi|21228587|ref|NP_634509.1| - 0.036 14.0 14.8 0.019 14.9 8.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4040) DUF2109 PF09882.4 gi|21228587|ref|NP_634509.1| - 0.78 9.7 11.3 0.23 11.4 5.3 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) Claudin_2 PF13903.1 gi|21228587|ref|NP_634509.1| - 0.84 9.2 14.4 1.1 8.9 10.0 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction GPI2 PF06432.6 gi|21228587|ref|NP_634509.1| - 3 7.1 5.2 4.1 6.6 3.6 1.2 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase HlyIII PF03006.15 gi|21228587|ref|NP_634509.1| - 3.6 6.9 9.5 4.3 6.6 6.6 1.1 1 0 0 1 1 1 0 Haemolysin-III related V_ATPase_I PF01496.14 gi|21228587|ref|NP_634509.1| - 5.9 4.6 5.8 7.2 4.3 4.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fer4 PF00037.22 gi|21228588|ref|NP_634510.1| - 7e-15 53.9 10.7 2.8e-08 33.0 1.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21228588|ref|NP_634510.1| - 1e-11 45.0 7.4 2e-11 44.0 5.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228588|ref|NP_634510.1| - 1.9e-09 37.1 18.9 6e-08 32.3 7.1 2.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228588|ref|NP_634510.1| - 2.4e-09 37.3 6.5 5.7e-09 36.0 4.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21228588|ref|NP_634510.1| - 7.9e-09 36.1 7.9 0.0008 20.1 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21228588|ref|NP_634510.1| - 8.5e-09 35.3 4.9 1.9e-08 34.2 3.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228588|ref|NP_634510.1| - 3e-08 33.0 11.7 0.00013 21.6 2.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21228588|ref|NP_634510.1| - 3.8e-08 33.0 6.6 7.7e-08 32.0 4.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21228588|ref|NP_634510.1| - 2.4e-07 30.3 14.2 1.9e-05 24.3 1.6 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21228588|ref|NP_634510.1| - 1.9e-06 28.2 5.1 0.001 19.4 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21228588|ref|NP_634510.1| - 7.9e-05 23.1 6.5 0.0012 19.3 0.8 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21228588|ref|NP_634510.1| - 0.0002 21.6 10.7 0.0067 16.7 6.6 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21228588|ref|NP_634510.1| - 0.0022 18.1 17.5 0.0085 16.3 2.5 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21228588|ref|NP_634510.1| - 0.0033 17.7 10.5 0.0038 17.5 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21228588|ref|NP_634510.1| - 0.0087 16.5 3.0 0.0087 16.5 2.1 3.0 4 0 0 4 4 2 2 4Fe-4S binding domain NADHdh PF00146.16 gi|21228589|ref|NP_634511.1| - 1.4e-91 306.8 14.5 1.8e-91 306.4 10.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.14 gi|21228590|ref|NP_634512.1| - 7.1e-73 244.9 0.0 8.8e-70 234.8 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|21228590|ref|NP_634512.1| - 2.1e-08 33.4 0.0 1.8e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Nickel-dependent hydrogenase Complex1_30kDa PF00329.14 gi|21228591|ref|NP_634513.1| - 2.8e-34 117.4 0.1 5.6e-34 116.4 0.0 1.5 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YqbF PF14553.1 gi|21228591|ref|NP_634513.1| - 0.14 11.8 0.4 3.3 7.4 0.0 2.2 2 0 0 2 2 2 0 YqbF, hypothetical protein domain Oxidored_q6 PF01058.17 gi|21228592|ref|NP_634514.1| - 5.3e-24 84.3 0.0 7.5e-24 83.8 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit RE_NgoFVII PF09565.5 gi|21228592|ref|NP_634514.1| - 0.09 11.7 0.0 0.16 10.8 0.0 1.4 1 0 0 1 1 1 0 NgoFVII restriction endonuclease Oxidored_q4 PF00507.14 gi|21228593|ref|NP_634515.1| - 7.6e-29 99.5 6.5 9.6e-29 99.2 4.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Fer4 PF00037.22 gi|21228594|ref|NP_634516.1| - 1.3e-12 46.7 16.9 2.1e-06 27.0 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21228594|ref|NP_634516.1| - 5.3e-09 36.3 25.5 2.2e-06 27.9 9.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21228594|ref|NP_634516.1| - 4e-08 32.9 12.4 6.3e-08 32.3 8.6 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228594|ref|NP_634516.1| - 4.7e-08 33.1 12.2 0.00056 20.1 1.8 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228594|ref|NP_634516.1| - 5.1e-08 32.5 27.0 1.8e-05 24.4 10.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21228594|ref|NP_634516.1| - 2.7e-07 30.1 16.4 0.0016 18.2 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21228594|ref|NP_634516.1| - 9.4e-07 29.4 11.9 0.0031 18.2 1.1 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21228594|ref|NP_634516.1| - 1.2e-06 28.4 15.6 0.00067 19.7 2.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21228594|ref|NP_634516.1| - 1.8e-05 25.0 16.7 0.0068 16.8 2.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228594|ref|NP_634516.1| - 5.3e-05 22.8 15.0 0.019 14.8 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21228594|ref|NP_634516.1| - 7.2e-05 22.7 14.9 0.014 15.4 2.8 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21228594|ref|NP_634516.1| - 0.00017 21.8 14.3 0.063 13.6 2.4 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21228594|ref|NP_634516.1| - 0.0021 18.4 19.1 0.16 12.6 3.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21228594|ref|NP_634516.1| - 0.05 14.1 2.8 0.05 14.1 1.9 2.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21228594|ref|NP_634516.1| - 0.15 12.4 16.1 0.23 11.8 1.7 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain NAD_binding_8 PF13450.1 gi|21228595|ref|NP_634517.1| - 1.4e-11 44.2 0.1 5.1e-11 42.4 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|21228595|ref|NP_634517.1| - 7.3e-09 34.9 0.3 0.0019 17.1 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Amino_oxidase PF01593.19 gi|21228595|ref|NP_634517.1| - 1.5e-08 34.1 0.0 1.1e-07 31.3 0.0 2.1 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase HI0933_like PF03486.9 gi|21228595|ref|NP_634517.1| - 4.5e-07 28.6 0.3 0.0018 16.8 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.19 gi|21228595|ref|NP_634517.1| - 2.2e-05 23.4 1.7 0.00022 20.2 0.1 2.3 3 0 0 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.9 gi|21228595|ref|NP_634517.1| - 6e-05 23.0 0.5 0.00047 20.0 0.0 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|21228595|ref|NP_634517.1| - 0.001 19.4 1.2 0.013 15.9 0.1 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21228595|ref|NP_634517.1| - 0.0018 18.3 0.0 0.12 12.4 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|21228595|ref|NP_634517.1| - 0.036 13.5 0.1 0.073 12.5 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.14 gi|21228595|ref|NP_634517.1| - 0.036 13.1 0.5 0.059 12.4 0.4 1.3 1 0 0 1 1 1 0 FAD binding domain Thi4 PF01946.12 gi|21228595|ref|NP_634517.1| - 0.039 13.0 1.8 0.31 10.0 0.1 2.4 2 1 0 2 2 2 0 Thi4 family GIDA PF01134.17 gi|21228595|ref|NP_634517.1| - 0.039 12.7 0.2 0.069 11.9 0.0 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A GMC_oxred_N PF00732.14 gi|21228595|ref|NP_634517.1| - 0.055 12.6 0.2 0.39 9.8 0.0 2.0 2 0 0 2 2 2 0 GMC oxidoreductase NAD_binding_9 PF13454.1 gi|21228595|ref|NP_634517.1| - 0.12 12.0 0.3 1 9.1 0.0 2.5 3 0 0 3 3 3 0 FAD-NAD(P)-binding FAD_oxidored PF12831.2 gi|21228595|ref|NP_634517.1| - 0.16 10.9 0.1 0.29 10.1 0.1 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase GDI PF00996.13 gi|21228595|ref|NP_634517.1| - 0.2 9.9 0.0 1.6 6.9 0.0 2.0 2 0 0 2 2 2 0 GDP dissociation inhibitor Radical_SAM PF04055.16 gi|21228596|ref|NP_634518.1| - 2.6e-13 50.5 0.1 1e-12 48.5 0.1 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Radical_SAM PF04055.16 gi|21228597|ref|NP_634519.1| - 4e-20 72.6 0.1 7.2e-20 71.8 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer2 PF00111.22 gi|21228597|ref|NP_634519.1| - 0.013 15.1 0.3 0.033 13.9 0.2 1.6 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fer4_14 PF13394.1 gi|21228597|ref|NP_634519.1| - 0.046 13.7 0.1 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|161485667|ref|NP_634520.2| - 7.1e-21 75.0 0.1 1e-20 74.5 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DUF849 PF05853.7 gi|161485667|ref|NP_634520.2| - 0.088 11.6 0.0 0.34 9.7 0.0 1.9 1 1 1 2 2 2 0 Prokaryotic protein of unknown function (DUF849) DUF3791 PF12668.2 gi|161485667|ref|NP_634520.2| - 0.14 11.7 0.2 0.74 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) CofC PF01983.11 gi|21228599|ref|NP_634521.1| - 1.2e-48 164.9 0.0 1.4e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|21228599|ref|NP_634521.1| - 0.00031 20.8 0.0 0.0004 20.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.4 gi|21228599|ref|NP_634521.1| - 0.0033 17.0 0.0 0.0053 16.3 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) Lzipper-MIP1 PF14389.1 gi|21228599|ref|NP_634521.1| - 0.021 14.8 0.6 0.046 13.8 0.4 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 CTP_transf_3 PF02348.14 gi|21228599|ref|NP_634521.1| - 0.054 13.1 0.2 0.37 10.3 0.0 2.0 2 0 0 2 2 2 0 Cytidylyltransferase TetR_C_3 PF08362.6 gi|21228600|ref|NP_634522.1| - 0.0012 18.5 0.1 0.0018 18.0 0.1 1.3 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region FAD_binding_3 PF01494.14 gi|21228601|ref|NP_634523.1| - 2.9e-19 69.3 3.6 7.6e-17 61.3 2.5 2.9 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|21228601|ref|NP_634523.1| - 4.3e-12 45.6 1.2 1.3e-05 24.2 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21228601|ref|NP_634523.1| - 1e-11 44.3 0.7 8.8e-08 31.3 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|21228601|ref|NP_634523.1| - 1.3e-10 40.9 3.7 3.9e-10 39.3 2.6 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21228601|ref|NP_634523.1| - 3.2e-08 32.4 0.3 7e-08 31.3 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|21228601|ref|NP_634523.1| - 3.3e-07 29.5 0.1 8.6e-06 24.8 0.2 2.3 2 1 0 2 2 2 1 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|21228601|ref|NP_634523.1| - 4.3e-07 29.8 0.0 1.3e-06 28.3 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|21228601|ref|NP_634523.1| - 5.3e-06 26.4 8.6 2e-05 24.5 5.9 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21228601|ref|NP_634523.1| - 1.2e-05 24.4 0.5 1.6e-05 23.9 0.3 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.12 gi|21228601|ref|NP_634523.1| - 5.3e-05 22.4 0.3 0.00026 20.1 0.0 2.1 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.9 gi|21228601|ref|NP_634523.1| - 8.2e-05 21.4 4.3 0.047 12.3 0.2 2.5 2 1 0 3 3 3 2 Tryptophan halogenase Pyr_redox_3 PF13738.1 gi|21228601|ref|NP_634523.1| - 0.0044 17.0 0.1 0.006 16.6 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|21228601|ref|NP_634523.1| - 0.0047 16.5 0.1 0.022 14.4 0.0 2.1 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|21228601|ref|NP_634523.1| - 0.0086 16.4 0.1 0.0086 16.4 0.0 2.4 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.16 gi|21228601|ref|NP_634523.1| - 0.024 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.15 gi|21228601|ref|NP_634523.1| - 0.039 14.0 0.1 0.21 11.6 0.0 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase GDI PF00996.13 gi|21228601|ref|NP_634523.1| - 0.067 11.4 0.0 0.1 10.9 0.0 1.2 1 0 0 1 1 1 0 GDP dissociation inhibitor SE PF08491.5 gi|21228601|ref|NP_634523.1| - 0.12 11.1 0.1 0.24 10.2 0.1 1.4 1 0 0 1 1 1 0 Squalene epoxidase NAD_binding_7 PF13241.1 gi|21228601|ref|NP_634523.1| - 0.13 12.5 0.5 0.38 11.0 0.2 2.0 2 1 0 2 2 2 0 Putative NAD(P)-binding NAD_binding_10 PF13460.1 gi|21228601|ref|NP_634523.1| - 0.21 11.5 1.6 0.33 10.9 0.1 2.0 2 0 0 2 2 2 0 NADH(P)-binding TrkH PF02386.11 gi|21228602|ref|NP_634524.1| - 1.1e-61 208.4 30.7 1.1e-60 205.1 14.5 2.2 1 1 1 2 2 2 2 Cation transport protein YniB PF14002.1 gi|21228602|ref|NP_634524.1| - 0.054 12.9 0.5 0.054 12.9 0.4 2.6 3 1 0 3 3 3 0 YniB-like protein Peptidase_M50 PF02163.17 gi|21228602|ref|NP_634524.1| - 5.3 5.9 8.6 3.7 6.4 2.0 3.0 2 2 0 2 2 2 0 Peptidase family M50 TrkA_N PF02254.13 gi|21228603|ref|NP_634525.1| - 1.1e-47 160.8 8.1 9e-26 90.1 0.6 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.16 gi|21228603|ref|NP_634525.1| - 6e-32 109.0 2.9 1.7e-15 56.3 0.0 3.1 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|21228603|ref|NP_634525.1| - 8.9e-09 35.5 2.1 0.0022 18.1 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|21228603|ref|NP_634525.1| - 3.8e-06 27.0 1.8 0.039 14.0 0.1 2.4 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|21228603|ref|NP_634525.1| - 0.00014 21.6 0.4 0.5 10.0 0.1 2.6 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_10 PF13460.1 gi|21228603|ref|NP_634525.1| - 0.0012 18.8 1.5 0.0095 15.9 0.3 2.1 2 0 0 2 2 2 1 NADH(P)-binding ThiF PF00899.16 gi|21228603|ref|NP_634525.1| - 0.0029 17.4 0.2 16 5.2 0.0 3.5 3 0 0 3 3 3 0 ThiF family Pyr_redox PF00070.22 gi|21228603|ref|NP_634525.1| - 0.0032 17.8 1.6 0.46 10.9 0.1 2.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.9 gi|21228603|ref|NP_634525.1| - 0.0043 16.9 1.2 1.2 8.9 0.1 2.8 2 2 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase OCD_Mu_crystall PF02423.10 gi|21228603|ref|NP_634525.1| - 0.0062 15.3 0.3 0.38 9.4 0.0 2.2 2 0 0 2 2 2 1 Ornithine cyclodeaminase/mu-crystallin family ApbA PF02558.11 gi|21228603|ref|NP_634525.1| - 0.0083 15.5 0.1 2.6 7.4 0.0 2.4 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA Saccharop_dh PF03435.13 gi|21228603|ref|NP_634525.1| - 0.0085 15.1 3.8 0.85 8.5 0.8 2.2 2 0 0 2 2 2 2 Saccharopine dehydrogenase DUF1188 PF06690.6 gi|21228603|ref|NP_634525.1| - 0.0099 15.0 0.9 0.3 10.1 0.1 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF1188) UDPG_MGDP_dh_N PF03721.9 gi|21228603|ref|NP_634525.1| - 0.01 15.2 0.9 0.073 12.4 0.1 2.6 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.13 gi|21228603|ref|NP_634525.1| - 0.016 14.8 0.2 0.079 12.6 0.1 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.14 gi|21228603|ref|NP_634525.1| - 0.05 12.6 3.1 1.1 8.3 0.0 3.1 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Iron_permease PF04120.7 gi|21228603|ref|NP_634525.1| - 0.071 12.6 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Low affinity iron permease TrkH PF02386.11 gi|21228604|ref|NP_634526.1| - 7.9e-53 179.2 20.5 7.9e-53 179.2 14.2 2.2 1 1 1 2 2 2 2 Cation transport protein TrkA_N PF02254.13 gi|21228605|ref|NP_634527.1| - 2.5e-51 172.5 7.5 4e-27 94.5 0.3 2.4 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.16 gi|21228605|ref|NP_634527.1| - 1.4e-32 111.0 0.5 5.2e-16 58.0 0.0 3.4 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|21228605|ref|NP_634527.1| - 4.1e-09 36.6 4.5 0.00063 19.9 0.6 2.6 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|21228605|ref|NP_634527.1| - 4.5e-09 36.5 3.2 0.0021 18.1 0.4 2.6 2 1 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Saccharop_dh PF03435.13 gi|21228605|ref|NP_634527.1| - 5.4e-06 25.6 3.0 0.0079 15.2 0.3 2.3 2 0 0 2 2 2 2 Saccharopine dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|21228605|ref|NP_634527.1| - 2.5e-05 24.0 0.6 0.14 11.8 0.1 2.8 2 1 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.9 gi|21228605|ref|NP_634527.1| - 8.4e-05 22.5 0.2 0.44 10.3 0.0 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.11 gi|21228605|ref|NP_634527.1| - 9.2e-05 21.9 0.3 0.12 11.7 0.0 2.5 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.12 gi|21228605|ref|NP_634527.1| - 9.4e-05 22.7 2.4 0.068 13.6 0.2 3.4 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent OCD_Mu_crystall PF02423.10 gi|21228605|ref|NP_634527.1| - 0.0002 20.2 1.8 0.033 12.9 0.0 2.2 2 0 0 2 2 2 2 Ornithine cyclodeaminase/mu-crystallin family ThiF PF00899.16 gi|21228605|ref|NP_634527.1| - 0.0003 20.6 0.1 4.7 7.0 0.0 3.6 3 0 0 3 3 3 1 ThiF family ADH_zinc_N PF00107.21 gi|21228605|ref|NP_634527.1| - 0.0006 19.3 0.2 0.21 11.1 0.0 3.6 4 0 0 4 4 4 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|21228605|ref|NP_634527.1| - 0.0012 18.2 0.7 0.029 13.7 0.1 3.0 3 0 0 3 3 3 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF1188 PF06690.6 gi|21228605|ref|NP_634527.1| - 0.0013 17.9 1.3 0.031 13.4 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1188) NAD_binding_8 PF13450.1 gi|21228605|ref|NP_634527.1| - 0.0053 16.7 0.1 3.2 7.8 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain CbiA PF01656.18 gi|21228605|ref|NP_634527.1| - 0.0066 15.8 4.9 0.01 15.2 0.4 2.9 2 2 1 3 3 3 1 CobQ/CobB/MinD/ParA nucleotide binding domain 3HCDH_N PF02737.13 gi|21228605|ref|NP_634527.1| - 0.0071 16.0 0.4 0.05 13.2 0.1 2.3 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.22 gi|21228605|ref|NP_634527.1| - 0.0073 16.6 0.8 3.8 7.9 0.0 2.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21228605|ref|NP_634527.1| - 0.014 14.3 0.3 2.2 7.1 0.1 2.5 3 0 0 3 3 3 0 Lycopene cyclase protein FAD_binding_3 PF01494.14 gi|21228605|ref|NP_634527.1| - 0.036 13.1 0.0 0.56 9.1 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain NmrA PF05368.8 gi|21228605|ref|NP_634527.1| - 0.04 13.1 1.8 0.052 12.7 0.4 1.7 2 0 0 2 2 2 0 NmrA-like family GFO_IDH_MocA PF01408.17 gi|21228605|ref|NP_634527.1| - 0.044 14.2 0.2 3.4 8.1 0.1 2.6 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Methyltransf_18 PF12847.2 gi|21228605|ref|NP_634527.1| - 0.055 14.0 0.4 3 8.4 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain 2-Hacid_dh_C PF02826.14 gi|21228605|ref|NP_634527.1| - 0.064 12.3 0.2 0.93 8.6 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_C PF03720.10 gi|21228605|ref|NP_634527.1| - 0.084 13.0 0.8 7.3 6.7 0.1 2.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AdoHcyase_NAD PF00670.16 gi|21228605|ref|NP_634527.1| - 0.1 12.4 2.9 0.3 10.9 0.7 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CPSase_L_chain PF00289.17 gi|21228605|ref|NP_634527.1| - 0.32 11.1 2.5 0.24 11.4 0.2 1.9 2 1 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain CTDII PF01556.13 gi|21228606|ref|NP_634528.1| - 1.7e-28 98.3 0.2 2.4e-20 72.2 0.2 3.2 3 0 0 3 3 3 2 DnaJ C terminal domain DnaJ PF00226.26 gi|21228606|ref|NP_634528.1| - 1.9e-28 97.9 2.8 1.9e-28 97.9 1.9 1.8 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|21228606|ref|NP_634528.1| - 8.2e-16 57.8 16.2 1.4e-15 57.0 11.3 1.4 1 0 0 1 1 1 1 DnaJ central domain Ogr_Delta PF04606.7 gi|21228606|ref|NP_634528.1| - 0.035 13.7 9.3 1.2 8.8 0.3 3.1 3 1 0 3 3 3 0 Ogr/Delta-like zinc finger Prim_Zn_Ribbon PF08273.7 gi|21228606|ref|NP_634528.1| - 0.068 13.2 16.6 0.049 13.7 2.3 3.2 2 1 1 3 3 3 0 Zinc-binding domain of primase-helicase Lar_restr_allev PF14354.1 gi|21228606|ref|NP_634528.1| - 0.18 12.1 7.1 1 9.6 0.6 2.8 1 1 1 2 2 2 0 Restriction alleviation protein Lar Cytochrom_C PF00034.16 gi|21228606|ref|NP_634528.1| - 1.8 9.4 4.1 0.74 10.6 0.1 2.4 3 0 0 3 3 3 0 Cytochrome c zf-C3HC4_3 PF13920.1 gi|21228606|ref|NP_634528.1| - 5.9 6.6 7.5 5 6.8 0.5 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) HSP70 PF00012.15 gi|21228607|ref|NP_634529.1| - 2.8e-253 841.3 13.9 9.6e-223 740.4 5.7 2.0 1 1 1 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.8 gi|21228607|ref|NP_634529.1| - 2.5e-17 62.4 2.1 2.5e-17 62.4 1.5 2.5 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.11 gi|21228607|ref|NP_634529.1| - 1.3e-05 24.9 0.0 2.9e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.1 gi|21228607|ref|NP_634529.1| - 1.8e-05 24.5 4.7 0.00069 19.4 0.3 4.2 2 1 0 2 2 2 1 Cell division protein FtsA BcrAD_BadFG PF01869.15 gi|21228607|ref|NP_634529.1| - 0.0018 17.6 2.5 0.79 8.9 0.1 2.9 2 1 1 3 3 3 2 BadF/BadG/BcrA/BcrD ATPase family StbA PF06406.6 gi|21228607|ref|NP_634529.1| - 0.028 13.3 0.2 0.11 11.3 0.0 2.1 3 0 0 3 3 3 0 StbA protein DUF3347 PF11827.3 gi|21228607|ref|NP_634529.1| - 4.5 7.2 10.8 13 5.7 5.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) GrpE PF01025.14 gi|21228608|ref|NP_634530.1| - 1.3e-45 154.9 4.7 1.7e-45 154.5 3.3 1.2 1 0 0 1 1 1 1 GrpE DDE_Tnp_1 PF01609.16 gi|21228609|ref|NP_634531.1| - 7.9e-10 38.6 1.5 1.3e-09 37.8 1.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|21228609|ref|NP_634531.1| - 0.0054 16.5 0.8 0.034 13.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|21228609|ref|NP_634531.1| - 0.037 13.6 1.5 0.44 10.1 0.0 2.9 3 0 0 3 3 3 0 Paired amphipathic helix repeat PrgI PF12666.2 gi|21228610|ref|NP_634532.1| - 0.028 14.5 3.1 0.028 14.5 2.1 2.4 1 1 1 2 2 2 0 PrgI family protein Keratin_assoc PF09775.4 gi|21228610|ref|NP_634532.1| - 0.12 11.8 7.1 0.18 11.3 4.9 1.2 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 DUF3483 PF11982.3 gi|21228610|ref|NP_634532.1| - 1.1 8.5 6.3 1.4 8.1 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) DUF3816 PF12822.2 gi|21228610|ref|NP_634532.1| - 3.7 7.4 18.0 98 2.7 12.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3816) DUF373 PF04123.8 gi|21228610|ref|NP_634532.1| - 3.8 6.4 10.3 17 4.2 7.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF373) DDE_Tnp_1 PF01609.16 gi|21228611|ref|NP_634533.1| - 7.9e-10 38.6 1.5 1.3e-09 37.8 1.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|21228611|ref|NP_634533.1| - 0.0054 16.5 0.8 0.034 13.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|21228611|ref|NP_634533.1| - 0.037 13.6 1.5 0.44 10.1 0.0 2.9 3 0 0 3 3 3 0 Paired amphipathic helix repeat ATP-grasp_3 PF02655.9 gi|21228612|ref|NP_634534.1| - 1.1e-47 161.8 0.0 1.5e-47 161.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|21228612|ref|NP_634534.1| - 6.4e-08 32.5 0.0 1e-06 28.6 0.0 2.6 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21228612|ref|NP_634534.1| - 7.7e-05 21.5 0.0 0.015 14.0 0.0 3.0 1 1 1 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|21228612|ref|NP_634534.1| - 0.086 12.2 0.0 0.19 11.1 0.0 1.6 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus Hydantoinase_A PF01968.13 gi|21228613|ref|NP_634535.1| - 3.6e-23 82.0 1.6 2.4e-22 79.3 0.1 2.0 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.1 gi|21228613|ref|NP_634535.1| - 2.7e-05 22.7 0.0 0.0052 15.1 0.0 2.2 2 0 0 2 2 2 2 MutL protein Hydant_A_N PF05378.8 gi|21228613|ref|NP_634535.1| - 3 7.3 8.4 27 4.2 0.2 3.4 2 2 0 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region AA_kinase PF00696.23 gi|21228614|ref|NP_634536.1| - 3.2e-10 39.9 0.0 5.2e-09 36.0 0.0 2.1 1 1 0 1 1 1 1 Amino acid kinase family Peptidase_C5 PF00770.13 gi|21228614|ref|NP_634536.1| - 0.026 14.0 0.1 0.049 13.1 0.0 1.5 2 0 0 2 2 2 0 Adenovirus endoprotease DUF1610 PF07754.6 gi|21228615|ref|NP_634537.1| - 3.9e-19 68.3 19.0 9.9e-11 41.5 2.9 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) DZR PF12773.2 gi|21228615|ref|NP_634537.1| - 0.00012 21.8 11.8 0.027 14.2 8.2 2.4 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21228615|ref|NP_634537.1| - 0.00015 21.1 19.3 0.00047 19.5 2.9 3.2 2 2 1 3 3 3 1 zinc-ribbon domain DUF2039 PF10217.4 gi|21228615|ref|NP_634537.1| - 0.002 18.0 3.1 0.002 18.0 2.1 1.7 1 1 1 2 2 2 1 Uncharacterized conserved protein (DUF2039) OrfB_Zn_ribbon PF07282.6 gi|21228615|ref|NP_634537.1| - 0.0027 17.3 9.6 0.0092 15.6 3.7 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.1 gi|21228615|ref|NP_634537.1| - 0.0032 16.6 16.0 0.7 9.1 1.1 3.8 2 1 1 3 3 3 1 zinc-ribbon domain tRNA-synt_1g PF09334.6 gi|21228615|ref|NP_634537.1| - 0.016 13.8 1.8 0.017 13.7 1.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-C4_Topoisom PF01396.14 gi|21228615|ref|NP_634537.1| - 0.05 13.1 12.3 2.5 7.6 0.1 3.5 2 1 1 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-C3HC4_3 PF13920.1 gi|21228615|ref|NP_634537.1| - 0.079 12.6 9.9 0.54 9.9 2.5 2.3 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS91 PF14319.1 gi|21228615|ref|NP_634537.1| - 0.12 11.9 9.2 0.21 11.0 6.4 1.5 1 1 0 1 1 1 0 Transposase zinc-binding domain DNA_RNApol_7kD PF03604.8 gi|21228615|ref|NP_634537.1| - 0.14 11.6 13.0 1.5 8.3 0.1 3.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-UBP PF02148.14 gi|21228615|ref|NP_634537.1| - 0.15 12.1 1.5 0.15 12.1 1.0 2.2 2 1 1 3 3 3 0 Zn-finger in ubiquitin-hydrolases and other protein zf-HIT PF04438.11 gi|21228615|ref|NP_634537.1| - 0.2 11.3 15.8 0.23 11.1 3.6 2.9 1 1 1 2 2 2 0 HIT zinc finger UPF0547 PF10571.4 gi|21228615|ref|NP_634537.1| - 0.21 11.2 11.8 1.5 8.6 5.7 3.2 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.5 gi|21228615|ref|NP_634537.1| - 0.25 11.3 14.3 19 5.2 0.0 3.3 2 1 0 2 2 2 0 Zinc ribbon domain Prok-RING_1 PF14446.1 gi|21228615|ref|NP_634537.1| - 0.25 11.0 11.2 0.32 10.7 0.8 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-HYPF PF07503.7 gi|21228615|ref|NP_634537.1| - 0.27 10.6 12.9 4.7 6.7 5.8 2.4 2 1 0 2 2 2 0 HypF finger PolC_DP2 PF03833.8 gi|21228615|ref|NP_634537.1| - 0.28 8.7 6.5 0.32 8.6 4.5 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.1 gi|21228615|ref|NP_634537.1| - 0.33 10.6 14.4 4.2 7.1 0.1 3.8 3 1 1 4 4 4 0 Nudix N-terminal zf-Mss51 PF13824.1 gi|21228615|ref|NP_634537.1| - 0.37 10.6 12.9 6.6 6.6 1.9 2.7 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C3HC4_4 PF15227.1 gi|21228615|ref|NP_634537.1| - 0.43 10.5 10.1 0.27 11.1 0.8 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING C1_3 PF07649.7 gi|21228615|ref|NP_634537.1| - 0.49 10.4 11.1 0.23 11.5 0.9 2.3 2 0 0 2 2 2 0 C1-like domain NMD3 PF04981.8 gi|21228615|ref|NP_634537.1| - 0.49 9.4 8.0 0.69 8.9 5.5 1.3 1 1 0 1 1 1 0 NMD3 family C1_1 PF00130.17 gi|21228615|ref|NP_634537.1| - 0.62 9.8 10.5 0.18 11.5 0.5 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C3HC4 PF00097.20 gi|21228615|ref|NP_634537.1| - 0.74 9.5 12.4 0.21 11.3 1.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DNA_ligase_ZBD PF03119.11 gi|21228615|ref|NP_634537.1| - 1.1 9.0 9.2 2.6 7.8 0.2 3.3 3 2 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain IBR PF01485.16 gi|21228615|ref|NP_634537.1| - 1.4 8.8 11.7 45 4.0 8.1 2.3 1 1 0 1 1 1 0 IBR domain DUF4428 PF14471.1 gi|21228615|ref|NP_634537.1| - 1.6 8.5 6.8 0.93 9.2 2.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) Tnp_zf-ribbon_2 PF13842.1 gi|21228615|ref|NP_634537.1| - 1.6 9.1 14.3 0.17 12.3 2.4 2.8 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-FCS PF06467.9 gi|21228615|ref|NP_634537.1| - 1.7 8.3 0.0 1.7 8.3 0.0 2.9 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif zinc-ribbons_6 PF07191.7 gi|21228615|ref|NP_634537.1| - 1.7 8.5 9.4 18 5.2 6.5 2.2 1 1 0 1 1 1 0 zinc-ribbons HypA PF01155.14 gi|21228615|ref|NP_634537.1| - 2.4 7.9 11.0 0.58 9.8 0.5 2.1 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family zf-NADH-PPase PF09297.6 gi|21228615|ref|NP_634537.1| - 2.4 7.7 14.9 2.6 7.6 0.1 4.0 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37ae PF01780.14 gi|21228615|ref|NP_634537.1| - 2.8 7.8 5.8 1.2 9.0 1.7 2.0 1 1 1 2 2 2 0 Ribosomal L37ae protein family DUF1272 PF06906.6 gi|21228615|ref|NP_634537.1| - 2.8 7.8 11.7 7.7 6.4 1.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) CpXC PF14353.1 gi|21228615|ref|NP_634537.1| - 3 7.8 11.1 1.6 8.6 0.2 2.8 1 1 2 3 3 3 0 CpXC protein zf-tcix PF14952.1 gi|21228615|ref|NP_634537.1| - 3.3 7.0 19.0 9.3 5.6 1.0 3.2 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-C2HC5 PF06221.8 gi|21228615|ref|NP_634537.1| - 3.7 7.3 10.9 2.7 7.8 2.2 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-B_box PF00643.19 gi|21228615|ref|NP_634537.1| - 4 7.4 9.9 46 4.0 4.4 2.8 2 1 0 2 2 2 0 B-box zinc finger RecR PF02132.10 gi|21228615|ref|NP_634537.1| - 4.1 6.9 15.0 6.4 6.3 0.1 3.9 2 1 2 4 4 4 0 RecR protein DUF2296 PF10058.4 gi|21228615|ref|NP_634537.1| - 4.2 7.1 14.3 4.7 7.0 1.6 3.4 2 2 1 3 3 3 0 Predicted integral membrane metal-binding protein (DUF2296) zf-LITAF-like PF10601.4 gi|21228615|ref|NP_634537.1| - 5.6 6.9 12.2 3.2 7.7 0.3 3.4 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain A2L_zn_ribbon PF08792.5 gi|21228615|ref|NP_634537.1| - 5.6 6.5 14.3 1.8 8.1 2.2 3.4 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-C3HC4_2 PF13923.1 gi|21228615|ref|NP_634537.1| - 6.3 6.9 10.3 1.6 8.8 0.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-piccolo PF05715.8 gi|21228615|ref|NP_634537.1| - 6.8 6.7 8.7 9.6 6.3 4.0 2.2 2 1 0 2 2 2 0 Piccolo Zn-finger zf-IS66 PF13005.2 gi|21228615|ref|NP_634537.1| - 8.2 6.4 13.7 14 5.7 0.2 3.6 3 1 0 3 3 3 0 zinc-finger binding domain of transposase IS66 PhnA_Zn_Ribbon PF08274.7 gi|21228615|ref|NP_634537.1| - 8.5 6.2 12.9 2.1 8.1 5.0 2.6 2 1 0 2 2 1 0 PhnA Zinc-Ribbon zf-C2H2_4 PF13894.1 gi|21228615|ref|NP_634537.1| - 8.7 6.9 15.6 7.7 7.0 0.6 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger EF1_GNE PF00736.14 gi|21228616|ref|NP_634538.1| - 2.9e-21 74.9 0.2 3e-21 74.8 0.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain PAS_3 PF08447.6 gi|21228617|ref|NP_634539.1| - 4.8e-89 292.5 15.9 3.9e-23 81.3 0.4 5.6 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.1 gi|21228617|ref|NP_634539.1| - 1.2e-48 163.8 1.7 5e-11 42.9 0.1 6.6 6 0 0 6 6 6 5 PAS domain HisKA_2 PF07568.7 gi|21228617|ref|NP_634539.1| - 4.5e-33 112.9 4.0 4.5e-33 112.9 2.8 3.2 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.19 gi|21228617|ref|NP_634539.1| - 1.1e-31 108.9 0.3 1.1e-07 31.6 0.0 6.8 6 0 0 6 6 6 5 PAS fold PAS_4 PF08448.5 gi|21228617|ref|NP_634539.1| - 5.7e-22 77.8 0.0 1.2e-10 41.4 0.0 4.9 4 0 0 4 4 4 4 PAS fold PAS_11 PF14598.1 gi|21228617|ref|NP_634539.1| - 1.1e-13 51.1 0.0 0.0019 18.1 0.0 5.5 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|21228617|ref|NP_634539.1| - 4.4e-11 42.4 0.0 4.3e-10 39.2 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|21228617|ref|NP_634539.1| - 5.6e-05 23.5 0.4 0.00014 22.1 0.3 1.7 1 0 0 1 1 1 1 HWE histidine kinase YcgL PF05166.8 gi|21228617|ref|NP_634539.1| - 0.00012 22.0 3.1 4.8 7.3 0.0 3.9 3 0 0 3 3 3 2 YcgL domain PAS_8 PF13188.1 gi|21228617|ref|NP_634539.1| - 0.00024 20.8 0.0 0.12 12.3 0.0 4.1 4 0 0 4 4 4 1 PAS domain PAS_10 PF13596.1 gi|21228617|ref|NP_634539.1| - 0.012 15.8 0.0 1.4 9.1 0.0 3.6 3 0 0 3 3 3 0 PAS domain Nit_Regul_Hom PF10126.4 gi|21228617|ref|NP_634539.1| - 0.013 15.2 0.4 0.31 10.8 0.0 3.2 3 0 0 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII HATPase_c_2 PF13581.1 gi|21228617|ref|NP_634539.1| - 0.055 13.2 0.0 0.17 11.6 0.0 1.9 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.19 gi|21228618|ref|NP_634540.1| - 8.4e-22 77.2 0.1 9.8e-22 77.0 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain ThiI PF02568.9 gi|21228619|ref|NP_634541.1| - 7.9e-53 178.8 0.0 1.1e-52 178.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|21228619|ref|NP_634541.1| - 5.8e-16 58.6 0.0 2.1e-15 56.8 0.0 2.0 2 0 0 2 2 2 1 THUMP domain QueC PF06508.8 gi|21228619|ref|NP_634541.1| - 1.8e-05 24.1 0.0 0.022 14.0 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|21228619|ref|NP_634541.1| - 0.00018 20.1 0.0 0.00039 19.1 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase PAS_9 PF13426.1 gi|21228620|ref|NP_634542.1| - 3.2e-33 114.2 0.9 3.5e-15 56.2 0.0 3.9 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|21228620|ref|NP_634542.1| - 3.2e-31 107.4 0.0 1.4e-11 44.1 0.0 3.6 3 0 0 3 3 3 3 PAS fold HATPase_c PF02518.21 gi|21228620|ref|NP_634542.1| - 2.1e-30 104.6 0.1 4.1e-30 103.7 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|21228620|ref|NP_634542.1| - 5.5e-26 89.5 0.1 8.5e-09 34.9 0.0 3.9 3 1 1 4 4 4 3 PAS domain PAS_4 PF08448.5 gi|21228620|ref|NP_634542.1| - 7.5e-18 64.5 0.0 9.5e-06 25.6 0.0 3.7 3 1 0 3 3 3 3 PAS fold HisKA PF00512.20 gi|21228620|ref|NP_634542.1| - 2.8e-16 59.2 0.0 2.1e-15 56.4 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain Response_reg PF00072.19 gi|21228620|ref|NP_634542.1| - 1.3e-11 44.4 0.0 3.3e-10 39.9 0.0 3.0 3 0 0 3 3 3 1 Response regulator receiver domain PAS_3 PF08447.6 gi|21228620|ref|NP_634542.1| - 1.7e-08 34.4 0.0 0.033 14.2 0.0 3.5 3 0 0 3 3 3 2 PAS fold PAS_7 PF12860.2 gi|21228620|ref|NP_634542.1| - 1.4e-05 25.0 0.6 0.66 9.9 0.0 4.9 4 2 0 4 4 4 2 PAS fold MMR_HSR1 PF01926.18 gi|21228621|ref|NP_634543.1| - 9e-18 64.3 0.7 1.8e-13 50.4 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|21228621|ref|NP_634543.1| - 1.2e-10 40.8 1.0 0.00021 20.6 0.1 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|21228621|ref|NP_634543.1| - 1.4e-06 27.9 1.8 3.7e-05 23.2 0.1 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain DUF258 PF03193.11 gi|21228621|ref|NP_634543.1| - 0.00019 20.6 0.1 0.00033 19.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 Miro PF08477.8 gi|21228621|ref|NP_634543.1| - 0.00035 21.0 0.2 0.21 12.1 0.0 2.7 2 1 0 2 2 2 2 Miro-like protein AIG1 PF04548.11 gi|21228621|ref|NP_634543.1| - 0.0008 18.5 0.0 0.0016 17.6 0.0 1.5 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.18 gi|21228621|ref|NP_634543.1| - 0.0011 18.8 2.9 2 8.1 0.1 3.2 2 1 1 3 3 3 2 Dynamin family cobW PF02492.14 gi|21228621|ref|NP_634543.1| - 0.002 17.5 0.3 0.002 17.5 0.2 1.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.12 gi|21228621|ref|NP_634543.1| - 0.092 12.2 0.3 0.24 10.8 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ArgK PF03308.11 gi|21228621|ref|NP_634543.1| - 0.096 11.4 4.7 0.16 10.7 0.2 2.4 2 1 1 3 3 3 0 ArgK protein Pput2613-deam PF14427.1 gi|21228622|ref|NP_634544.1| - 0.0083 15.7 0.3 0.014 15.0 0.2 1.4 1 1 0 1 1 1 1 Pput_2613-like deaminase Toxin_49 PF15529.1 gi|21228622|ref|NP_634544.1| - 0.12 12.3 0.1 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative toxin 49 A2L_zn_ribbon PF08792.5 gi|21228623|ref|NP_634545.1| - 0.25 10.8 1.1 21 4.7 0.1 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF2892 PF11127.3 gi|21228623|ref|NP_634545.1| - 0.65 9.8 2.8 17 5.3 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) Usp PF00582.21 gi|21228624|ref|NP_634546.1| - 2.6e-39 134.6 0.0 2.9e-39 134.4 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPD52 PF04201.10 gi|21228625|ref|NP_634547.1| - 0.088 12.5 0.5 0.11 12.2 0.4 1.2 1 0 0 1 1 1 0 Tumour protein D52 family PspA_IM30 PF04012.7 gi|21228626|ref|NP_634548.1| - 1.5e-24 86.6 32.2 1.7e-24 86.4 22.3 1.0 1 0 0 1 1 1 1 PspA/IM30 family Osmo_CC PF08946.5 gi|21228626|ref|NP_634548.1| - 0.0089 16.0 2.5 0.0089 16.0 1.8 2.6 2 0 0 2 2 2 1 Osmosensory transporter coiled coil Flagellin_C PF00700.16 gi|21228626|ref|NP_634548.1| - 0.01 15.9 10.5 0.36 11.0 0.1 3.5 1 1 2 3 3 3 0 Bacterial flagellin C-terminal helical region NOG1 PF06858.9 gi|21228626|ref|NP_634548.1| - 0.03 14.1 0.2 0.15 11.9 0.0 2.3 2 1 1 3 3 3 0 Nucleolar GTP-binding protein 1 (NOG1) MutS_III PF05192.13 gi|21228626|ref|NP_634548.1| - 0.063 13.0 0.1 0.063 13.0 0.1 2.3 1 1 0 2 2 2 0 MutS domain III DUF1664 PF07889.7 gi|21228626|ref|NP_634548.1| - 0.065 13.0 14.9 0.26 11.0 1.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Scaffolding_pro PF11418.3 gi|21228626|ref|NP_634548.1| - 0.68 10.2 17.5 2.1 8.7 2.8 3.7 1 1 2 3 3 3 0 Phi29 scaffolding protein NPV_P10 PF05531.7 gi|21228626|ref|NP_634548.1| - 8.1 6.7 11.6 8.7 6.6 0.5 3.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein V4R PF02830.13 gi|21228627|ref|NP_634549.1| - 5.5e-17 61.3 0.7 1.1e-16 60.3 0.5 1.6 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.15 gi|21228627|ref|NP_634549.1| - 4.1e-13 48.7 0.0 7.4e-13 47.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|21228627|ref|NP_634549.1| - 4.1e-06 26.3 0.0 6.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.2 gi|21228627|ref|NP_634549.1| - 4.4e-05 23.2 0.0 0.0001 22.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.5 gi|21228627|ref|NP_634549.1| - 0.00048 19.6 0.0 0.00087 18.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.1 gi|21228627|ref|NP_634549.1| - 0.00078 19.7 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21228627|ref|NP_634549.1| - 0.0075 15.9 0.0 0.015 14.9 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|21228627|ref|NP_634549.1| - 0.066 12.6 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.6 gi|21228627|ref|NP_634549.1| - 0.089 12.7 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HxlR PF01638.12 gi|21228627|ref|NP_634549.1| - 0.13 11.9 0.0 0.26 10.9 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_38 PF13936.1 gi|21228627|ref|NP_634549.1| - 0.15 11.6 0.0 0.37 10.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2110 PF09883.4 gi|21228628|ref|NP_634550.1| - 1.8e-88 296.0 0.1 2e-88 295.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) MarR PF01047.17 gi|21228629|ref|NP_634551.1| - 0.0046 16.6 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|21228629|ref|NP_634551.1| - 0.012 15.2 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.1 gi|21228629|ref|NP_634551.1| - 0.041 13.7 0.2 0.11 12.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_27 PF13463.1 gi|21228629|ref|NP_634551.1| - 0.077 13.3 0.0 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF4407 PF14362.1 gi|21228629|ref|NP_634551.1| - 1.2 7.9 3.8 1.5 7.7 1.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TRM PF02005.11 gi|21228630|ref|NP_634552.1| - 9.5e-106 353.8 0.0 1.1e-105 353.6 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase DUF3195 PF11424.3 gi|21228630|ref|NP_634552.1| - 0.0056 16.8 0.0 0.023 14.8 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3195) Cons_hypoth95 PF03602.10 gi|21228630|ref|NP_634552.1| - 0.011 15.1 0.0 0.02 14.2 0.0 1.4 1 0 0 1 1 1 0 Conserved hypothetical protein 95 zf-ribbon_3 PF13248.1 gi|21228630|ref|NP_634552.1| - 1.1 8.4 6.8 0.62 9.3 2.5 2.3 2 1 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|21228630|ref|NP_634552.1| - 3 7.6 7.5 7.7 6.3 0.6 2.9 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Cupredoxin_1 PF13473.1 gi|21228631|ref|NP_634553.1| - 0.00073 19.3 0.0 0.0011 18.8 0.0 1.3 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|21228631|ref|NP_634553.1| - 0.03 14.5 0.3 0.15 12.2 0.0 2.2 2 1 0 2 2 2 0 Copper binding proteins, plastocyanin/azurin family Transposase_mut PF00872.13 gi|21228632|ref|NP_634554.1| - 3.5e-114 381.3 1.8 4.4e-114 380.9 1.2 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|21228632|ref|NP_634554.1| - 1.2e-13 50.9 0.0 4.7e-13 49.1 0.0 2.0 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|21228632|ref|NP_634554.1| - 1.2e-05 25.0 2.4 0.0033 17.0 0.1 2.3 1 1 1 2 2 2 2 Transposase DDE_Tnp_IS240 PF13610.1 gi|21228632|ref|NP_634554.1| - 0.0016 18.4 3.4 0.068 13.1 2.1 2.6 1 1 1 2 2 2 1 DDE domain HipA_C PF07804.7 gi|21228632|ref|NP_634554.1| - 0.049 13.7 0.1 0.72 10.0 0.1 2.6 2 0 0 2 2 2 0 HipA-like C-terminal domain DUF3530 PF12048.3 gi|21228633|ref|NP_634555.1| - 0.2 10.6 2.7 0.18 10.7 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Tim54 PF11711.3 gi|21228633|ref|NP_634555.1| - 2 6.9 5.4 2 6.9 3.7 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4637 PF15470.1 gi|21228633|ref|NP_634555.1| - 5.9 6.4 7.1 8 6.0 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Merozoite_SPAM PF07133.6 gi|21228633|ref|NP_634555.1| - 9.4 6.0 13.0 12 5.7 9.0 1.1 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DUF4010 PF13194.1 gi|21228634|ref|NP_634556.1| - 1.5e-49 168.2 18.7 1.5e-49 168.2 13.0 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.11 gi|21228634|ref|NP_634556.1| - 1.5e-07 31.3 7.3 1.5e-07 31.3 5.1 3.9 2 2 0 3 3 3 1 MgtC family Metallophos_2 PF12850.2 gi|21228635|ref|NP_634557.1| - 1.5e-21 76.9 0.0 2.3e-21 76.2 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21228635|ref|NP_634557.1| - 8.4e-15 54.6 1.2 4.3e-14 52.3 0.8 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|21228635|ref|NP_634557.1| - 1e-14 54.3 0.6 7.6e-10 38.3 0.1 2.6 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily MT0933_antitox PF14013.1 gi|21228635|ref|NP_634557.1| - 1.3 9.1 3.4 7.4 6.7 0.0 3.0 3 1 0 3 3 3 0 MT0933-like antitoxin protein Methyltrn_RNA_2 PF04013.7 gi|21228636|ref|NP_634558.1| - 2.5e-63 213.2 0.0 2.8e-63 213.0 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase THUMP PF02926.12 gi|21228637|ref|NP_634559.1| - 4.1e-12 46.1 0.8 8.8e-12 45.1 0.0 1.9 2 1 1 3 3 3 1 THUMP domain DNA_pol3_a_NI PF14480.1 gi|21228637|ref|NP_634559.1| - 0.0047 16.5 0.1 0.01 15.4 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase III polC-type N-terminus I Ribosomal_L21e PF01157.13 gi|21228638|ref|NP_634560.1| - 1.6e-27 95.1 0.4 1.8e-27 95.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.11 gi|21228639|ref|NP_634561.1| - 2.5e-14 53.3 2.7 3e-14 53.0 1.9 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF655 PF04919.7 gi|21228640|ref|NP_634562.1| - 2.4e-68 229.4 0.1 2.8e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_3 PF12836.2 gi|21228640|ref|NP_634562.1| - 0.00052 19.8 0.0 0.012 15.5 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_6 PF14579.1 gi|21228640|ref|NP_634562.1| - 0.00068 19.6 0.0 0.0027 17.7 0.0 1.8 1 1 1 2 2 2 1 Helix-hairpin-helix motif RrnaAD PF00398.15 gi|21228641|ref|NP_634563.1| - 5.9e-40 136.9 0.0 6.6e-40 136.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|21228641|ref|NP_634563.1| - 0.0011 18.9 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228641|ref|NP_634563.1| - 0.1 13.2 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_26 PF13659.1 gi|21228642|ref|NP_634564.1| - 2.6e-15 56.4 0.0 3.9e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21228642|ref|NP_634564.1| - 1.1e-11 44.4 0.0 1.5e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|21228642|ref|NP_634564.1| - 9.4e-09 35.8 0.0 1.9e-08 34.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228642|ref|NP_634564.1| - 2.2e-07 30.5 0.0 3e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228642|ref|NP_634564.1| - 3.8e-06 26.7 0.0 0.00075 19.2 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228642|ref|NP_634564.1| - 9.1e-06 26.0 0.0 0.00012 22.4 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|21228642|ref|NP_634564.1| - 6.7e-05 22.5 0.0 0.00025 20.6 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.7 gi|21228642|ref|NP_634564.1| - 0.00015 22.2 0.0 0.0031 17.9 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.7 gi|21228642|ref|NP_634564.1| - 0.0031 16.9 0.0 0.0052 16.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.15 gi|21228642|ref|NP_634564.1| - 0.0089 15.1 0.0 1.2 8.1 0.0 2.1 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase DREV PF05219.7 gi|21228642|ref|NP_634564.1| - 0.037 12.9 0.0 0.062 12.1 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Met_10 PF02475.11 gi|21228642|ref|NP_634564.1| - 0.04 13.5 0.1 0.072 12.6 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein PrmA PF06325.8 gi|21228642|ref|NP_634564.1| - 0.05 12.7 0.0 0.23 10.5 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|21228642|ref|NP_634564.1| - 0.055 12.4 0.0 0.076 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_16 PF10294.4 gi|21228642|ref|NP_634564.1| - 0.073 12.5 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_25 PF13649.1 gi|21228642|ref|NP_634564.1| - 0.08 13.3 0.0 0.16 12.3 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_10 PF05971.7 gi|21228642|ref|NP_634564.1| - 0.092 11.8 0.0 0.35 9.9 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF890) Cons_hypoth95 PF03602.10 gi|21228642|ref|NP_634564.1| - 0.1 11.9 0.0 0.21 10.9 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 E1-E2_ATPase PF00122.15 gi|21228643|ref|NP_634565.1| - 1.2e-74 250.1 0.0 1.2e-74 250.1 0.0 2.2 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.16 gi|21228643|ref|NP_634565.1| - 3e-48 163.7 10.3 3e-48 163.7 7.1 2.9 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.21 gi|21228643|ref|NP_634565.1| - 2.7e-36 126.0 0.1 1.4e-35 123.7 0.0 2.2 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|21228643|ref|NP_634565.1| - 3.1e-22 77.7 0.1 8.1e-22 76.4 0.1 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_like2 PF13246.1 gi|21228643|ref|NP_634565.1| - 3.8e-20 71.6 0.0 7.3e-20 70.7 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|21228643|ref|NP_634565.1| - 4.5e-16 59.5 0.0 8.5e-16 58.6 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21228643|ref|NP_634565.1| - 0.0014 18.2 2.3 0.0038 16.8 0.9 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase NUDIX PF00293.23 gi|21228644|ref|NP_634566.1| - 1.2e-21 76.7 0.0 2e-21 76.0 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain NUDIX-like PF09296.6 gi|21228644|ref|NP_634566.1| - 4.2e-15 55.8 0.0 7e-15 55.1 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain zf-NADH-PPase PF09297.6 gi|21228644|ref|NP_634566.1| - 4e-12 45.4 4.3 6e-12 44.8 3.0 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain DZR PF12773.2 gi|21228644|ref|NP_634566.1| - 0.00029 20.5 1.0 0.0005 19.8 0.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.6 gi|21228644|ref|NP_634566.1| - 0.00031 20.3 1.2 0.00065 19.2 0.8 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.14 gi|21228644|ref|NP_634566.1| - 0.0035 17.0 0.4 0.006 16.2 0.3 1.3 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family UPF0547 PF10571.4 gi|21228644|ref|NP_634566.1| - 0.0077 15.9 1.4 2.1 8.0 0.3 2.5 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 gi|21228644|ref|NP_634566.1| - 0.012 15.1 4.3 0.34 10.4 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|21228644|ref|NP_634566.1| - 0.02 14.6 0.7 0.02 14.6 0.5 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.1 gi|21228644|ref|NP_634566.1| - 0.11 11.7 6.1 2.4 7.4 0.4 2.2 1 1 0 2 2 2 0 zinc-ribbon domain RRN7 PF11781.3 gi|21228644|ref|NP_634566.1| - 0.11 11.9 4.2 1.4 8.4 0.2 2.4 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-C3HC4_4 PF15227.1 gi|21228644|ref|NP_634566.1| - 0.3 10.9 1.6 0.53 10.2 1.1 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Nudix_N_2 PF14803.1 gi|21228644|ref|NP_634566.1| - 0.32 10.7 3.7 3.8 7.2 2.6 2.2 1 1 0 1 1 1 0 Nudix N-terminal RNA_POL_M_15KD PF02150.11 gi|21228644|ref|NP_634566.1| - 0.88 9.3 3.3 4.2 7.1 0.0 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DUF35_N PF12172.3 gi|21228644|ref|NP_634566.1| - 4.5 7.3 5.7 1 9.3 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Sigma_reg_N PF13800.1 gi|21228647|ref|NP_634569.1| - 0.11 12.4 0.5 0.17 11.9 0.3 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal XhlA PF10779.4 gi|21228647|ref|NP_634569.1| - 6.5 6.7 6.1 1.1 9.1 1.6 1.6 2 0 0 2 2 2 0 Haemolysin XhlA TetR_N PF00440.18 gi|21228648|ref|NP_634570.1| - 1.3e-15 56.7 0.2 2.6e-15 55.7 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family RuvA_N PF01330.16 gi|21228648|ref|NP_634570.1| - 0.027 14.2 0.0 0.063 13.0 0.0 1.6 1 0 0 1 1 1 0 RuvA N terminal domain WHG PF13305.1 gi|21228648|ref|NP_634570.1| - 0.039 14.5 0.0 0.086 13.4 0.0 1.7 1 0 0 1 1 1 0 WHG domain Fer4 PF00037.22 gi|21228649|ref|NP_634571.1| - 4.4e-11 41.8 17.7 9.9e-07 28.1 3.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21228649|ref|NP_634571.1| - 4.1e-08 33.8 11.5 7.1e-05 23.4 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|21228649|ref|NP_634571.1| - 4.4e-07 30.1 16.1 0.0033 17.7 1.6 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228649|ref|NP_634571.1| - 5.5e-07 29.7 28.1 0.00014 22.0 12.3 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Flavodoxin_5 PF12724.2 gi|21228649|ref|NP_634571.1| - 1.2e-05 25.2 0.0 1.9e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Fer4_21 PF14697.1 gi|21228649|ref|NP_634571.1| - 4.7e-05 23.1 11.6 0.0036 17.1 1.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21228649|ref|NP_634571.1| - 4.7e-05 23.0 18.3 0.00017 21.2 12.8 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21228649|ref|NP_634571.1| - 0.00011 22.1 27.0 0.00064 19.7 1.3 2.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain Flavodoxin_4 PF12682.2 gi|21228649|ref|NP_634571.1| - 0.00023 20.5 0.0 0.043 13.1 0.0 2.3 1 1 1 2 2 2 1 Flavodoxin Fer4_6 PF12837.2 gi|21228649|ref|NP_634571.1| - 0.00046 19.9 4.0 0.00046 19.9 2.7 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Flavodoxin_3 PF12641.2 gi|21228649|ref|NP_634571.1| - 0.0012 18.2 0.0 0.021 14.2 0.0 2.2 2 0 0 2 2 2 1 Flavodoxin domain FMN_red PF03358.10 gi|21228649|ref|NP_634571.1| - 0.0013 18.2 0.0 0.0029 17.1 0.0 1.7 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Fer4_3 PF12798.2 gi|21228649|ref|NP_634571.1| - 0.0054 17.2 24.8 0.1 13.1 5.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21228649|ref|NP_634571.1| - 0.03 14.2 3.3 0.03 14.2 2.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21228649|ref|NP_634571.1| - 0.037 14.4 19.7 0.065 13.6 2.8 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Flavodoxin_2 PF02525.12 gi|21228649|ref|NP_634571.1| - 0.042 13.3 0.0 0.064 12.7 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin-like fold Fer4_17 PF13534.1 gi|21228649|ref|NP_634571.1| - 0.11 12.8 20.5 0.22 11.8 3.7 2.7 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21228649|ref|NP_634571.1| - 9 6.9 28.1 0.33 11.4 3.3 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Plasmid_stabil PF05016.9 gi|21228651|ref|NP_634573.1| - 0.00067 19.9 0.3 0.00074 19.8 0.2 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF2937 PF11157.3 gi|21228651|ref|NP_634573.1| - 0.16 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) Plasmid_killer PF05015.8 gi|21228651|ref|NP_634573.1| - 0.21 11.7 1.7 0.42 10.7 1.2 1.5 1 1 0 1 1 1 0 Plasmid maintenance system killer protein Transpep_BrtH PF14399.1 gi|21228651|ref|NP_634573.1| - 0.8 8.9 3.2 0.38 10.0 0.8 1.5 2 0 0 2 2 2 0 NlpC/p60-like transpeptidase DUF2683 PF10884.3 gi|21228652|ref|NP_634574.1| - 6.3e-38 128.5 5.4 6.8e-38 128.4 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) Peptidase_M32 PF02074.10 gi|21228652|ref|NP_634574.1| - 0.015 13.9 0.2 0.015 13.9 0.1 1.0 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase DUF673 PF05054.7 gi|21228652|ref|NP_634574.1| - 0.05 12.1 0.1 0.055 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF673) RHH_1 PF01402.16 gi|21228652|ref|NP_634574.1| - 0.1 12.5 0.4 0.1 12.5 0.3 2.6 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family CAT PF00302.13 gi|21228653|ref|NP_634575.1| - 1.7e-41 142.1 5.1 1.9e-41 141.9 3.5 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase 2-oxoacid_dh PF00198.18 gi|21228653|ref|NP_634575.1| - 0.0052 16.0 0.1 0.059 12.6 0.0 2.0 2 0 0 2 2 2 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Condensation PF00668.15 gi|21228653|ref|NP_634575.1| - 0.074 11.8 0.0 1.1 8.0 0.0 2.0 2 0 0 2 2 2 0 Condensation domain Pentapeptide_4 PF13599.1 gi|21228654|ref|NP_634576.1| - 1.5e-24 85.5 17.2 2.2e-09 36.9 4.7 3.1 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 gi|21228654|ref|NP_634576.1| - 1.3e-15 56.9 20.3 3.9e-08 33.0 5.3 3.9 2 2 2 4 4 4 3 Pentapeptide repeats (9 copies) Pentapeptide PF00805.17 gi|21228654|ref|NP_634576.1| - 2.3e-13 49.0 1.0 0.00064 18.8 0.0 4.2 2 1 1 4 4 4 3 Pentapeptide repeats (8 copies) Lip_prot_lig_C PF10437.4 gi|21228654|ref|NP_634576.1| - 0.11 12.1 0.2 0.46 10.1 0.0 2.1 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus RRM_3 PF08777.6 gi|21228654|ref|NP_634576.1| - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 RNA binding motif Abhydrolase_6 PF12697.2 gi|21228655|ref|NP_634577.1| - 2.8e-26 92.7 0.0 3.9e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|21228655|ref|NP_634577.1| - 2.3e-17 63.3 0.5 2.5e-15 56.6 0.4 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|21228655|ref|NP_634577.1| - 5.4e-16 58.6 0.1 1.3e-15 57.3 0.1 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.9 gi|21228655|ref|NP_634577.1| - 1.2e-06 27.2 0.0 3.6e-06 25.6 0.0 1.7 2 0 0 2 2 2 1 Ndr family Abhydrolase_4 PF08386.5 gi|21228655|ref|NP_634577.1| - 2.7e-06 27.2 0.0 5.3e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein Peptidase_S9 PF00326.16 gi|21228655|ref|NP_634577.1| - 6.1e-05 22.3 0.2 0.23 10.6 0.1 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Esterase_phd PF10503.4 gi|21228655|ref|NP_634577.1| - 0.00011 21.5 0.1 0.0074 15.5 0.0 2.1 2 0 0 2 2 2 1 Esterase PHB depolymerase Abhydrolase_3 PF07859.8 gi|21228655|ref|NP_634577.1| - 0.003 17.1 0.6 0.053 13.0 0.4 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Ser_hydrolase PF06821.8 gi|21228655|ref|NP_634577.1| - 0.0038 16.8 0.0 0.01 15.4 0.0 1.6 2 0 0 2 2 2 1 Serine hydrolase BAAT_C PF08840.6 gi|21228655|ref|NP_634577.1| - 0.0087 15.7 0.3 0.077 12.6 0.2 2.0 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.13 gi|21228655|ref|NP_634577.1| - 0.0091 15.3 0.0 0.16 11.2 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family DUF915 PF06028.6 gi|21228655|ref|NP_634577.1| - 0.026 13.6 0.0 0.1 11.6 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DUF1057 PF06342.7 gi|21228655|ref|NP_634577.1| - 0.03 13.1 0.0 0.046 12.5 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Acetyltransf_9 PF13527.1 gi|21228656|ref|NP_634578.1| - 9e-09 35.2 0.0 1.4e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228656|ref|NP_634578.1| - 1.1e-08 34.9 0.0 2.1e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21228656|ref|NP_634578.1| - 7.3e-07 29.2 0.1 1.3e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MOZ_SAS PF01853.13 gi|21228656|ref|NP_634578.1| - 0.00038 19.7 0.2 0.00098 18.4 0.0 1.7 2 0 0 2 2 2 1 MOZ/SAS family Acetyltransf_10 PF13673.1 gi|21228656|ref|NP_634578.1| - 0.00042 20.4 0.0 0.00069 19.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21228656|ref|NP_634578.1| - 0.071 13.0 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DEAD PF00270.24 gi|21228658|ref|NP_634580.1| - 1.3e-49 167.8 0.3 1.5e-48 164.4 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21228658|ref|NP_634580.1| - 6.2e-29 99.6 0.9 1.7e-28 98.2 0.2 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|21228658|ref|NP_634580.1| - 1.5e-07 31.4 0.0 2.8e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.1 gi|21228658|ref|NP_634580.1| - 0.00025 20.2 0.1 0.00053 19.1 0.0 1.6 1 1 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit DUF1253 PF06862.7 gi|21228658|ref|NP_634580.1| - 0.00025 19.6 0.0 0.46 8.8 0.0 3.1 2 1 1 3 3 3 2 Protein of unknown function (DUF1253) V-ATPase_H_C PF11698.3 gi|21228658|ref|NP_634580.1| - 0.0073 16.2 0.4 0.09 12.6 0.0 2.6 2 1 0 2 2 2 1 V-ATPase subunit H Flavi_DEAD PF07652.9 gi|21228658|ref|NP_634580.1| - 0.016 15.0 0.1 0.098 12.4 0.0 2.4 1 1 1 2 2 2 0 Flavivirus DEAD domain AAA_19 PF13245.1 gi|21228658|ref|NP_634580.1| - 0.017 14.8 0.1 0.059 13.1 0.0 2.0 2 0 0 2 2 2 0 Part of AAA domain Catalase PF00199.14 gi|21228659|ref|NP_634581.1| - 3.5e-176 585.5 3.3 4.3e-176 585.2 2.3 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.7 gi|21228659|ref|NP_634581.1| - 3.4e-21 74.8 0.0 6.9e-21 73.8 0.0 1.5 1 0 0 1 1 1 1 Catalase-related immune-responsive DUF262 PF03235.9 gi|21228661|ref|NP_634583.1| - 4.6e-22 79.0 0.3 4.6e-22 79.0 0.2 3.7 3 2 0 3 3 3 1 Protein of unknown function DUF262 ParBc PF02195.13 gi|21228661|ref|NP_634583.1| - 0.0023 17.9 0.0 0.0073 16.3 0.0 1.8 2 0 0 2 2 2 1 ParB-like nuclease domain DUF86 PF01934.12 gi|21228662|ref|NP_634584.1| - 0.018 14.6 0.1 0.1 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF86 DUF258 PF03193.11 gi|21228663|ref|NP_634585.1| - 5.1e-49 165.5 0.0 8.8e-49 164.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 ABC_tran PF00005.22 gi|21228663|ref|NP_634585.1| - 1.5e-09 38.2 0.1 3.6e-09 37.0 0.1 1.5 1 1 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.18 gi|21228663|ref|NP_634585.1| - 3.6e-09 36.5 0.0 7.4e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|21228663|ref|NP_634585.1| - 1.8e-05 24.0 0.1 0.023 13.9 0.0 2.6 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|21228663|ref|NP_634585.1| - 3.2e-05 23.4 0.6 0.027 13.8 0.0 2.6 2 1 1 3 3 3 2 Elongation factor Tu GTP binding domain Septin PF00735.13 gi|21228663|ref|NP_634585.1| - 4e-05 22.7 0.0 6.4e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Septin Dynamin_N PF00350.18 gi|21228663|ref|NP_634585.1| - 0.00017 21.4 3.8 0.0029 17.4 0.6 2.6 2 1 1 3 3 3 1 Dynamin family PduV-EutP PF10662.4 gi|21228663|ref|NP_634585.1| - 0.00019 20.9 0.1 0.28 10.6 0.0 2.5 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation AIG1 PF04548.11 gi|21228663|ref|NP_634585.1| - 0.0002 20.5 0.1 0.00038 19.6 0.1 1.4 1 0 0 1 1 1 1 AIG1 family Miro PF08477.8 gi|21228663|ref|NP_634585.1| - 0.00025 21.5 0.1 0.00072 20.0 0.0 1.8 2 0 0 2 2 1 1 Miro-like protein AAA_16 PF13191.1 gi|21228663|ref|NP_634585.1| - 0.00086 19.3 0.4 0.0021 18.1 0.1 1.7 2 0 0 2 2 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|21228663|ref|NP_634585.1| - 0.0011 18.4 0.1 0.0021 17.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|21228663|ref|NP_634585.1| - 0.0015 17.9 0.0 0.0023 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|21228663|ref|NP_634585.1| - 0.0026 17.2 0.1 0.0081 15.6 0.0 1.8 2 0 0 2 2 2 1 AAA-like domain MobB PF03205.9 gi|21228663|ref|NP_634585.1| - 0.0041 16.8 0.2 0.0091 15.7 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.14 gi|21228663|ref|NP_634585.1| - 0.0067 15.8 0.2 0.61 9.5 0.1 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.1 gi|21228663|ref|NP_634585.1| - 0.0067 16.3 0.0 0.018 14.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.12 gi|21228663|ref|NP_634585.1| - 0.021 14.6 0.6 0.11 12.2 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF87 MMR_HSR1_C PF08438.5 gi|21228663|ref|NP_634585.1| - 0.032 14.4 0.0 1 9.6 0.0 2.8 3 0 0 3 3 3 0 GTPase of unknown function C-terminal ArgK PF03308.11 gi|21228663|ref|NP_634585.1| - 0.048 12.4 0.2 0.048 12.4 0.1 1.6 2 0 0 2 2 2 0 ArgK protein AAA_17 PF13207.1 gi|21228663|ref|NP_634585.1| - 0.063 14.0 0.8 0.16 12.8 0.4 2.0 2 1 0 2 2 1 0 AAA domain AAA PF00004.24 gi|21228663|ref|NP_634585.1| - 0.075 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) KAP_NTPase PF07693.9 gi|21228663|ref|NP_634585.1| - 0.077 11.9 0.0 0.27 10.1 0.0 1.8 2 0 0 2 2 2 0 KAP family P-loop domain Guanylate_kin PF00625.16 gi|21228663|ref|NP_634585.1| - 0.099 12.0 0.0 0.19 11.1 0.0 1.6 1 0 0 1 1 1 0 Guanylate kinase AAA_22 PF13401.1 gi|21228663|ref|NP_634585.1| - 0.1 12.7 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.8 gi|21228663|ref|NP_634585.1| - 0.1 11.4 0.1 0.19 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) RNA_helicase PF00910.17 gi|21228663|ref|NP_634585.1| - 0.11 12.6 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.1 gi|21228663|ref|NP_634585.1| - 0.15 11.9 0.4 0.52 10.2 0.3 1.7 1 1 0 2 2 2 0 AAA domain PMBR PF09373.5 gi|21228663|ref|NP_634585.1| - 0.16 12.0 0.4 0.5 10.3 0.1 2.0 2 0 0 2 2 2 0 Pseudomurein-binding repeat NACHT PF05729.7 gi|21228663|ref|NP_634585.1| - 0.17 11.4 0.3 0.3 10.7 0.2 1.4 1 0 0 1 1 1 0 NACHT domain TPR_12 PF13424.1 gi|21228664|ref|NP_634586.1| - 1.7e-42 143.1 36.2 6.8e-08 32.3 1.8 11.7 9 4 1 12 12 11 8 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21228664|ref|NP_634586.1| - 2.7e-23 81.3 43.5 0.00076 19.0 3.4 11.7 6 4 7 13 13 13 9 TPR repeat TPR_7 PF13176.1 gi|21228664|ref|NP_634586.1| - 9.2e-23 78.2 30.2 0.0096 15.6 0.0 12.4 14 0 0 14 14 14 7 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21228664|ref|NP_634586.1| - 1.4e-19 69.3 8.9 0.0024 17.7 0.0 10.5 11 0 0 11 11 11 4 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21228664|ref|NP_634586.1| - 1.9e-19 68.3 42.6 0.0077 15.8 0.0 14.6 16 1 0 16 16 16 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228664|ref|NP_634586.1| - 2.3e-17 61.9 6.4 1.9 9.3 0.0 13.8 12 3 3 15 15 15 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228664|ref|NP_634586.1| - 6.1e-17 60.1 51.5 0.037 13.9 0.0 15.1 16 1 0 16 16 16 7 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228664|ref|NP_634586.1| - 1.8e-14 52.6 8.3 1.4 9.3 0.0 11.3 10 1 0 10 10 9 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228664|ref|NP_634586.1| - 1.4e-10 41.3 21.6 0.094 13.0 0.1 10.3 9 4 2 11 11 11 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228664|ref|NP_634586.1| - 3.3e-10 39.0 57.3 0.062 13.1 1.3 15.2 17 0 0 17 17 17 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228664|ref|NP_634586.1| - 1.1e-08 35.5 18.9 1.5 9.5 0.2 10.2 9 4 2 11 11 10 2 Tetratricopeptide repeat TOM20_plant PF06552.7 gi|21228664|ref|NP_634586.1| - 3.9e-05 23.3 5.9 4.8 6.7 0.0 6.7 6 2 1 8 8 8 1 Plant specific mitochondrial import receptor subunit TOM20 DUF2225 PF09986.4 gi|21228664|ref|NP_634586.1| - 0.00035 20.0 27.7 0.11 11.8 0.4 6.9 3 2 2 7 7 7 3 Uncharacterized protein conserved in bacteria (DUF2225) Peripla_BP_2 PF01497.13 gi|21228664|ref|NP_634586.1| - 0.0014 17.8 1.1 0.81 8.7 0.0 3.3 3 0 0 3 3 3 1 Periplasmic binding protein TPR_6 PF13174.1 gi|21228664|ref|NP_634586.1| - 0.0034 17.7 28.4 1.2 9.7 0.0 11.2 12 3 0 12 12 9 1 Tetratricopeptide repeat RRM_1 PF00076.17 gi|21228664|ref|NP_634586.1| - 0.17 11.5 2.1 1 9.0 0.0 3.4 4 0 0 4 4 4 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MIT PF04212.13 gi|21228664|ref|NP_634586.1| - 2.7 7.9 35.0 3.9 7.4 0.0 9.5 11 2 2 13 13 11 0 MIT (microtubule interacting and transport) domain DUF362 PF04015.7 gi|21228665|ref|NP_634587.1| - 6.5e-29 100.8 1.0 8.1e-28 97.3 0.7 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.22 gi|21228665|ref|NP_634587.1| - 6.8e-17 60.2 17.7 1.4e-08 33.9 4.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21228665|ref|NP_634587.1| - 3.7e-15 56.0 36.6 1e-09 38.6 8.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21228665|ref|NP_634587.1| - 8.5e-14 50.7 14.5 9.2e-07 28.4 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21228665|ref|NP_634587.1| - 6.5e-11 41.8 10.4 1.4e-10 40.7 7.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21228665|ref|NP_634587.1| - 1.8e-10 40.8 11.1 5.9e-06 26.4 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21228665|ref|NP_634587.1| - 5.4e-09 35.7 12.1 7.1e-05 22.5 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228665|ref|NP_634587.1| - 6.3e-09 35.2 15.6 6.1e-05 22.6 2.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21228665|ref|NP_634587.1| - 3.7e-08 33.9 12.1 0.00039 21.0 2.4 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|21228665|ref|NP_634587.1| - 1.1e-07 32.1 8.1 0.00038 20.8 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21228665|ref|NP_634587.1| - 1.3e-07 31.3 11.6 0.0014 18.7 2.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21228665|ref|NP_634587.1| - 2.4e-07 30.7 20.3 0.002 18.5 5.0 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21228665|ref|NP_634587.1| - 1.7e-06 27.9 22.8 1.9e-05 24.6 8.7 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21228665|ref|NP_634587.1| - 2.2e-05 24.8 8.6 0.012 16.1 1.1 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21228665|ref|NP_634587.1| - 0.00023 21.4 13.8 0.066 13.5 1.7 2.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|21228665|ref|NP_634587.1| - 0.00038 19.5 0.3 0.00059 18.9 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) Fer4_13 PF13370.1 gi|21228665|ref|NP_634587.1| - 0.00063 20.0 13.1 0.069 13.5 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|21228665|ref|NP_634587.1| - 0.099 12.5 5.8 0.18 11.7 4.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF1757 PF08560.5 gi|21228665|ref|NP_634587.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) DUF498 PF04430.9 gi|21228666|ref|NP_634588.1| - 2.4e-15 56.0 0.0 2.7e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) DUF3343 PF11823.3 gi|21228666|ref|NP_634588.1| - 0.012 14.8 0.2 0.026 13.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Radical_SAM PF04055.16 gi|21228667|ref|NP_634589.1| - 1.5e-18 67.5 0.0 3.2e-18 66.4 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21228667|ref|NP_634589.1| - 0.00028 21.0 0.0 0.00087 19.4 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain DZR PF12773.2 gi|21228667|ref|NP_634589.1| - 0.00068 19.3 0.2 0.00068 19.3 0.1 3.0 4 0 0 4 4 4 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|21228667|ref|NP_634589.1| - 0.0045 16.1 3.4 0.0045 16.1 2.3 3.2 3 1 2 5 5 5 3 zinc-ribbon domain GFA PF04828.9 gi|21228667|ref|NP_634589.1| - 0.0062 16.4 0.4 3 7.8 0.0 3.7 3 1 1 4 4 4 1 Glutathione-dependent formaldehyde-activating enzyme DNA_ligase_ZBD PF03119.11 gi|21228667|ref|NP_634589.1| - 0.0065 16.1 2.2 0.29 10.8 0.0 3.0 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain TF_Zn_Ribbon PF08271.7 gi|21228667|ref|NP_634589.1| - 0.049 12.9 1.2 3.5 7.0 0.0 2.8 2 0 0 2 2 2 0 TFIIB zinc-binding YhfH PF14149.1 gi|21228667|ref|NP_634589.1| - 0.1 12.3 4.4 0.18 11.6 0.1 2.9 3 0 0 3 3 3 0 YhfH-like protein zf-C4_Topoisom PF01396.14 gi|21228667|ref|NP_634589.1| - 0.29 10.6 9.3 1.2 8.6 0.0 3.3 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS1595 PF12760.2 gi|21228667|ref|NP_634589.1| - 2 8.2 12.6 14 5.5 0.3 4.2 4 0 0 4 4 4 0 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|21228667|ref|NP_634589.1| - 2.1 8.1 8.9 0.53 10.0 1.1 3.2 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit UPF0547 PF10571.4 gi|21228667|ref|NP_634589.1| - 4.8 6.9 17.1 0.43 10.3 0.6 4.1 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 zf-dskA_traR PF01258.12 gi|21228667|ref|NP_634589.1| - 6.2 6.6 10.1 0.5 10.1 0.2 3.2 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger zinc_ribbon_2 PF13240.1 gi|21228667|ref|NP_634589.1| - 6.7 6.3 17.8 1 8.9 0.1 4.3 5 0 0 5 5 5 0 zinc-ribbon domain CbiA PF01656.18 gi|21228668|ref|NP_634590.1| - 6.1e-23 81.2 0.0 7.6e-23 80.9 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|21228668|ref|NP_634590.1| - 2.2e-07 30.9 0.0 2.3e-06 27.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.15 gi|21228668|ref|NP_634590.1| - 3e-06 26.9 0.0 4.8e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_10 PF12846.2 gi|21228668|ref|NP_634590.1| - 6.9e-06 25.7 0.1 1.1e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 AAA-like domain AAA_17 PF13207.1 gi|21228668|ref|NP_634590.1| - 8.4e-06 26.6 0.0 1.7e-05 25.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain SRP54 PF00448.17 gi|21228668|ref|NP_634590.1| - 1.8e-05 24.2 0.1 0.00019 20.9 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.13 gi|21228668|ref|NP_634590.1| - 1.9e-05 23.9 0.7 6.9e-05 22.1 0.1 2.1 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.10 gi|21228668|ref|NP_634590.1| - 2.5e-05 23.4 0.2 4.8e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase MobB PF03205.9 gi|21228668|ref|NP_634590.1| - 2.8e-05 23.8 0.1 6.2e-05 22.7 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B KTI12 PF08433.5 gi|21228668|ref|NP_634590.1| - 4.8e-05 22.6 0.0 7.9e-05 21.9 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MipZ PF09140.6 gi|21228668|ref|NP_634590.1| - 5.1e-05 22.4 0.0 0.00018 20.7 0.0 1.8 2 0 0 2 2 2 1 ATPase MipZ AAA_25 PF13481.1 gi|21228668|ref|NP_634590.1| - 6.4e-05 22.4 0.1 0.00034 20.0 0.0 2.0 2 1 0 2 2 2 1 AAA domain DUF87 PF01935.12 gi|21228668|ref|NP_634590.1| - 0.0007 19.4 0.1 0.0015 18.4 0.0 1.5 2 0 0 2 2 1 1 Domain of unknown function DUF87 AAA_18 PF13238.1 gi|21228668|ref|NP_634590.1| - 0.0014 18.9 0.0 0.0025 18.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|21228668|ref|NP_634590.1| - 0.0021 17.2 0.0 0.0037 16.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin YhjQ PF06564.7 gi|21228668|ref|NP_634590.1| - 0.0025 17.2 0.0 0.025 13.9 0.0 2.0 2 0 0 2 2 2 1 YhjQ protein AAA_16 PF13191.1 gi|21228668|ref|NP_634590.1| - 0.0031 17.5 0.0 0.0081 16.1 0.0 1.7 2 1 0 2 2 2 1 AAA ATPase domain Mur_ligase_M PF08245.7 gi|21228668|ref|NP_634590.1| - 0.0036 17.3 0.0 0.17 11.9 0.0 2.3 2 0 0 2 2 2 1 Mur ligase middle domain FtsK_SpoIIIE PF01580.13 gi|21228668|ref|NP_634590.1| - 0.0041 16.6 0.1 0.017 14.6 0.0 1.9 2 0 0 2 2 2 1 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.4 gi|21228668|ref|NP_634590.1| - 0.0049 15.5 0.0 0.018 13.6 0.0 1.8 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain GTP_EFTU PF00009.22 gi|21228668|ref|NP_634590.1| - 0.0056 16.1 0.0 0.3 10.5 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Thymidylate_kin PF02223.12 gi|21228668|ref|NP_634590.1| - 0.0062 15.9 0.0 0.026 13.8 0.0 2.0 3 0 0 3 3 2 1 Thymidylate kinase ATP_bind_1 PF03029.12 gi|21228668|ref|NP_634590.1| - 0.0072 15.8 0.1 0.03 13.8 0.0 2.0 3 0 0 3 3 2 1 Conserved hypothetical ATP binding protein KaiC PF06745.8 gi|21228668|ref|NP_634590.1| - 0.0084 15.2 0.0 0.02 13.9 0.0 1.7 2 0 0 2 2 1 1 KaiC ArgK PF03308.11 gi|21228668|ref|NP_634590.1| - 0.0089 14.8 0.2 0.018 13.8 0.0 1.5 2 0 0 2 2 2 1 ArgK protein TrkA_N PF02254.13 gi|21228668|ref|NP_634590.1| - 0.014 15.3 0.0 0.24 11.4 0.0 2.3 2 1 0 2 2 2 0 TrkA-N domain RNA_helicase PF00910.17 gi|21228668|ref|NP_634590.1| - 0.019 15.1 0.0 0.065 13.4 0.0 1.9 2 0 0 2 2 2 0 RNA helicase AAA_33 PF13671.1 gi|21228668|ref|NP_634590.1| - 0.023 14.5 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|21228668|ref|NP_634590.1| - 0.025 14.5 0.0 4.7 7.2 0.0 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_30 PF13604.1 gi|21228668|ref|NP_634590.1| - 0.026 14.0 0.3 0.061 12.8 0.1 1.6 2 0 0 2 2 1 0 AAA domain Abhydrolase_5 PF12695.2 gi|21228668|ref|NP_634590.1| - 0.037 13.7 0.0 0.091 12.5 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase family AAA_26 PF13500.1 gi|21228668|ref|NP_634590.1| - 0.038 13.5 0.3 0.49 9.9 0.2 2.1 2 0 0 2 2 2 0 AAA domain Glyco_transf_4 PF13439.1 gi|21228668|ref|NP_634590.1| - 0.038 13.6 0.0 0.068 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 AAA_5 PF07728.9 gi|21228668|ref|NP_634590.1| - 0.04 13.6 0.0 0.067 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.22 gi|21228668|ref|NP_634590.1| - 0.043 14.1 0.0 0.081 13.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.1 gi|21228668|ref|NP_634590.1| - 0.048 13.2 0.1 0.082 12.4 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SE PF00437.15 gi|21228668|ref|NP_634590.1| - 0.062 12.1 0.0 0.091 11.6 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein POR PF01558.13 gi|21228668|ref|NP_634590.1| - 0.078 12.8 0.2 0.25 11.2 0.0 1.9 2 0 0 2 2 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase Miro PF08477.8 gi|21228668|ref|NP_634590.1| - 0.094 13.2 0.0 0.45 11.0 0.0 2.1 2 0 0 2 2 2 0 Miro-like protein Helicase_RecD PF05127.9 gi|21228668|ref|NP_634590.1| - 0.11 12.0 0.0 0.55 9.8 0.0 1.9 2 0 0 2 2 2 0 Helicase LpxK PF02606.9 gi|21228668|ref|NP_634590.1| - 0.13 11.1 0.1 0.37 9.7 0.1 1.6 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase IstB_IS21 PF01695.12 gi|21228668|ref|NP_634590.1| - 0.15 11.4 0.0 0.27 10.6 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein SBP_bac_5 PF00496.17 gi|21228669|ref|NP_634591.1| - 1.3e-92 310.5 0.0 1.6e-92 310.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.17 gi|21228670|ref|NP_634592.1| - 7.8e-47 159.1 12.2 7.8e-47 159.1 8.4 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3693 PF12472.3 gi|21228670|ref|NP_634592.1| - 0.0093 15.5 0.1 0.0093 15.5 0.1 2.5 3 0 0 3 3 3 1 Phage related protein Sial-lect-inser PF09264.5 gi|21228670|ref|NP_634592.1| - 0.097 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Vibrio cholerae sialidase, lectin insertion BPD_transp_1 PF00528.17 gi|21228671|ref|NP_634593.1| - 3.7e-29 101.5 9.1 3.7e-29 101.5 6.3 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|21228671|ref|NP_634593.1| - 2.8e-09 36.2 0.1 2.8e-09 36.2 0.0 2.6 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.22 gi|21228672|ref|NP_634594.1| - 7.4e-24 84.6 0.0 1.1e-23 84.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|21228672|ref|NP_634594.1| - 2e-13 50.4 0.7 3.8e-13 49.5 0.5 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|21228672|ref|NP_634594.1| - 3.2e-08 33.8 0.0 0.0011 18.9 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.1 gi|21228672|ref|NP_634594.1| - 0.0015 18.6 1.1 0.0074 16.4 0.8 1.9 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|21228672|ref|NP_634594.1| - 0.0032 17.8 0.0 0.0044 17.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain UPF0079 PF02367.12 gi|21228672|ref|NP_634594.1| - 0.01 15.4 0.5 0.019 14.5 0.3 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_29 PF13555.1 gi|21228672|ref|NP_634594.1| - 0.018 14.5 0.1 0.035 13.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.14 gi|21228672|ref|NP_634594.1| - 0.019 14.2 0.0 0.042 13.0 0.0 1.5 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain T2SE PF00437.15 gi|21228672|ref|NP_634594.1| - 0.12 11.2 0.3 0.21 10.4 0.2 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.24 gi|21228672|ref|NP_634594.1| - 0.13 12.4 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|21228672|ref|NP_634594.1| - 0.15 12.2 0.1 0.26 11.4 0.1 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.1 gi|21228672|ref|NP_634594.1| - 0.16 12.3 0.3 0.37 11.1 0.1 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.17 gi|21228672|ref|NP_634594.1| - 0.21 10.4 0.2 0.33 9.7 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain ABC_tran PF00005.22 gi|21228673|ref|NP_634595.1| - 2.1e-31 109.0 0.0 2.8e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228673|ref|NP_634595.1| - 5.5e-09 36.4 0.2 2.8e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228673|ref|NP_634595.1| - 4.4e-05 22.8 0.0 7.9e-05 21.9 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|21228673|ref|NP_634595.1| - 0.00048 20.2 0.2 0.0056 16.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21228673|ref|NP_634595.1| - 0.00082 18.8 0.1 0.0018 17.7 0.0 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21228673|ref|NP_634595.1| - 0.0013 18.7 0.3 0.0017 18.3 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|21228673|ref|NP_634595.1| - 0.0083 15.3 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|21228673|ref|NP_634595.1| - 0.016 15.4 0.1 0.042 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|21228673|ref|NP_634595.1| - 0.023 13.5 0.0 0.046 12.5 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.9 gi|21228673|ref|NP_634595.1| - 0.08 12.6 0.2 0.22 11.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.1 gi|21228673|ref|NP_634595.1| - 0.088 12.2 0.0 2.3 7.5 0.0 2.3 2 1 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|21228673|ref|NP_634595.1| - 0.088 11.9 0.0 0.22 10.6 0.0 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Methyltransf_2 PF00891.13 gi|21228674|ref|NP_634596.1| - 4.5e-11 42.4 0.0 8.2e-11 41.5 0.0 1.4 1 1 0 1 1 1 1 O-methyltransferase Methyltransf_18 PF12847.2 gi|21228674|ref|NP_634596.1| - 1.6e-07 31.8 0.0 3.9e-07 30.6 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228674|ref|NP_634596.1| - 0.004 17.6 0.0 0.0098 16.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21228674|ref|NP_634596.1| - 0.01 15.4 0.0 0.02 14.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.9 gi|21228674|ref|NP_634596.1| - 0.015 14.6 0.0 0.026 13.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|21228674|ref|NP_634596.1| - 0.05 13.6 0.0 0.18 11.8 0.0 1.9 1 1 1 2 2 2 0 Methyltransferase domain Fe_dep_repress PF01325.14 gi|21228675|ref|NP_634597.1| - 1.1e-18 66.9 0.5 1.7e-18 66.3 0.4 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|21228675|ref|NP_634597.1| - 2e-16 59.4 0.8 4.1e-16 58.4 0.6 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain LexA_DNA_bind PF01726.11 gi|21228675|ref|NP_634597.1| - 0.0001 21.7 0.0 0.00018 20.9 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_45 PF14947.1 gi|21228675|ref|NP_634597.1| - 0.00011 21.9 1.4 0.00023 20.9 1.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.2 gi|21228675|ref|NP_634597.1| - 0.00018 21.0 0.0 0.0004 19.9 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21228675|ref|NP_634597.1| - 0.0002 20.6 0.0 0.00042 19.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|21228675|ref|NP_634597.1| - 0.00025 20.6 0.0 0.00052 19.6 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|21228675|ref|NP_634597.1| - 0.0003 20.3 0.0 0.00071 19.1 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|21228675|ref|NP_634597.1| - 0.0018 17.9 0.1 0.0055 16.3 0.0 1.8 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.5 gi|21228675|ref|NP_634597.1| - 0.0019 17.9 0.3 0.0072 16.0 0.2 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain Penicillinase_R PF03965.11 gi|21228675|ref|NP_634597.1| - 0.0021 18.1 0.0 0.0076 16.3 0.0 2.0 1 1 0 1 1 1 1 Penicillinase repressor FeoC PF09012.5 gi|21228675|ref|NP_634597.1| - 0.0023 17.6 0.0 0.0048 16.5 0.0 1.6 1 1 0 1 1 1 1 FeoC like transcriptional regulator Rrf2 PF02082.15 gi|21228675|ref|NP_634597.1| - 0.0023 17.9 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.1 gi|21228675|ref|NP_634597.1| - 0.0058 16.9 0.0 0.017 15.4 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|21228675|ref|NP_634597.1| - 0.008 15.7 0.0 0.023 14.2 0.0 1.8 2 0 0 2 2 2 1 IclR helix-turn-helix domain SWIRM PF04433.12 gi|21228675|ref|NP_634597.1| - 0.016 15.2 0.0 0.1 12.7 0.0 2.0 2 0 0 2 2 2 0 SWIRM domain Mrr_N PF14338.1 gi|21228675|ref|NP_634597.1| - 0.018 15.1 0.5 0.34 11.0 0.1 2.3 2 0 0 2 2 2 0 Mrr N-terminal domain HTH_40 PF14493.1 gi|21228675|ref|NP_634597.1| - 0.019 15.1 0.1 0.069 13.3 0.1 2.0 1 1 0 1 1 1 0 Helix-turn-helix domain CENP-B_N PF04218.8 gi|21228675|ref|NP_634597.1| - 0.063 12.7 0.0 0.17 11.3 0.0 1.8 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_6 PF01418.12 gi|21228675|ref|NP_634597.1| - 0.063 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_Crp_2 PF13545.1 gi|21228675|ref|NP_634597.1| - 0.1 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_DeoR PF08220.7 gi|21228675|ref|NP_634597.1| - 0.11 12.0 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_28 PF13518.1 gi|21228675|ref|NP_634597.1| - 0.14 12.2 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain FeoC PF09012.5 gi|21228676|ref|NP_634598.1| - 1.1e-20 73.0 2.3 1.1e-20 73.0 1.6 1.3 1 1 0 1 1 1 1 FeoC like transcriptional regulator HTH_27 PF13463.1 gi|21228676|ref|NP_634598.1| - 0.00026 21.2 0.2 0.13 12.5 0.0 2.1 2 0 0 2 2 2 2 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|21228676|ref|NP_634598.1| - 0.0057 16.5 0.2 0.045 13.6 0.0 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.2 gi|21228676|ref|NP_634598.1| - 0.0095 15.5 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.1 gi|21228676|ref|NP_634598.1| - 0.016 14.9 0.9 2.9 7.7 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DUF4423 PF14394.1 gi|21228676|ref|NP_634598.1| - 0.019 14.5 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) FaeA PF04703.7 gi|21228676|ref|NP_634598.1| - 0.026 14.6 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein MarR PF01047.17 gi|21228676|ref|NP_634598.1| - 0.048 13.3 0.2 0.1 12.2 0.1 1.6 2 0 0 2 2 2 0 MarR family TrmB PF01978.14 gi|21228676|ref|NP_634598.1| - 0.051 13.2 0.0 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|21228676|ref|NP_634598.1| - 0.056 13.4 0.5 2.5 8.2 0.0 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain RPA_C PF08784.6 gi|21228676|ref|NP_634598.1| - 0.082 13.3 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Replication protein A C terminal HTH_24 PF13412.1 gi|21228676|ref|NP_634598.1| - 0.11 11.8 0.1 0.21 11.0 0.0 1.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_28 PF13518.1 gi|21228676|ref|NP_634598.1| - 0.12 12.3 0.0 0.56 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Rrf2 PF02082.15 gi|21228676|ref|NP_634598.1| - 0.13 12.4 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_5 PF01022.15 gi|21228676|ref|NP_634598.1| - 0.13 11.9 0.8 0.26 10.9 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family FeoB_N PF02421.13 gi|21228678|ref|NP_634600.1| - 3.8e-63 211.4 0.4 5.6e-63 210.8 0.3 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|21228678|ref|NP_634600.1| - 4.2e-47 158.5 23.6 5.6e-32 109.8 2.2 2.9 3 0 0 3 3 3 2 Nucleoside recognition FeoB_C PF07664.7 gi|21228678|ref|NP_634600.1| - 5.6e-18 64.0 0.7 5.6e-18 64.0 0.5 2.7 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.18 gi|21228678|ref|NP_634600.1| - 8e-16 58.0 0.1 1.7e-15 57.0 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.5 gi|21228678|ref|NP_634600.1| - 0.00011 21.4 0.0 0.00025 20.3 0.0 1.5 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit ArgK PF03308.11 gi|21228678|ref|NP_634600.1| - 0.013 14.2 0.6 1.3 7.7 0.1 2.2 2 0 0 2 2 2 0 ArgK protein AIG1 PF04548.11 gi|21228678|ref|NP_634600.1| - 0.034 13.2 0.0 0.055 12.5 0.0 1.3 1 0 0 1 1 1 0 AIG1 family NTPase_1 PF03266.10 gi|21228678|ref|NP_634600.1| - 0.038 13.6 0.3 0.07 12.8 0.2 1.4 1 0 0 1 1 1 0 NTPase Arf PF00025.16 gi|21228678|ref|NP_634600.1| - 0.065 12.4 0.1 0.15 11.3 0.1 1.6 1 1 0 1 1 1 0 ADP-ribosylation factor family GTP_EFTU PF00009.22 gi|21228678|ref|NP_634600.1| - 0.12 11.8 0.3 8.9 5.6 0.0 2.5 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain Dynamin_N PF00350.18 gi|21228678|ref|NP_634600.1| - 0.12 12.1 0.1 15 5.3 0.0 2.5 2 0 0 2 2 2 0 Dynamin family AAA_22 PF13401.1 gi|21228678|ref|NP_634600.1| - 0.13 12.4 0.2 15 5.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain FeoA PF04023.9 gi|21228679|ref|NP_634601.1| - 6.8e-19 67.6 0.1 7.8e-19 67.4 0.1 1.1 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.9 gi|21228680|ref|NP_634602.1| - 8.6e-17 60.8 0.1 9.5e-17 60.7 0.0 1.0 1 0 0 1 1 1 1 FeoA domain Transposase_20 PF02371.11 gi|21228681|ref|NP_634603.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21228681|ref|NP_634603.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21228681|ref|NP_634603.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.8 1 0 0 1 1 1 0 Orthopoxvirus F14 protein Radical_SAM PF04055.16 gi|21228683|ref|NP_634605.1| - 8.9e-19 68.2 0.0 1.7e-18 67.3 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21228683|ref|NP_634605.1| - 5.4e-06 26.5 1.6 6.4e-06 26.3 0.0 1.9 3 0 0 3 3 2 1 4Fe-4S single cluster domain zf-ribbon_3 PF13248.1 gi|21228683|ref|NP_634605.1| - 9e-05 21.5 8.1 0.058 12.6 0.0 3.4 4 0 0 4 4 4 2 zinc-ribbon domain DZR PF12773.2 gi|21228683|ref|NP_634605.1| - 0.00011 21.9 0.1 0.00011 21.9 0.1 2.9 3 0 0 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21228683|ref|NP_634605.1| - 0.011 15.1 11.4 0.054 12.9 0.1 4.1 5 0 0 5 5 5 0 zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|21228683|ref|NP_634605.1| - 0.021 14.3 1.4 7.2 6.2 0.1 2.8 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Fer4_14 PF13394.1 gi|21228683|ref|NP_634605.1| - 0.035 14.1 1.9 0.054 13.5 0.0 2.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain YhfH PF14149.1 gi|21228683|ref|NP_634605.1| - 0.045 13.5 0.1 0.045 13.5 0.1 3.0 4 0 0 4 4 3 0 YhfH-like protein GFA PF04828.9 gi|21228683|ref|NP_634605.1| - 0.23 11.4 8.6 0.41 10.6 0.0 3.7 3 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme Zn-ribbon_8 PF09723.5 gi|21228683|ref|NP_634605.1| - 0.47 10.4 10.5 5.6 7.0 0.0 3.8 4 0 0 4 4 4 0 Zinc ribbon domain UPF0167 PF03691.9 gi|21228683|ref|NP_634605.1| - 4.7 6.5 9.0 0.78 9.1 0.1 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0167) DUF1610 PF07754.6 gi|21228683|ref|NP_634605.1| - 6.1 7.0 8.8 17 5.6 1.6 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) TF_Zn_Ribbon PF08271.7 gi|21228683|ref|NP_634605.1| - 6.2 6.2 8.6 16 4.9 3.3 2.9 2 1 0 2 2 2 0 TFIIB zinc-binding zf-dskA_traR PF01258.12 gi|21228683|ref|NP_634605.1| - 9.1 6.1 10.3 0.47 10.2 0.4 3.2 4 0 0 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger UPF0547 PF10571.4 gi|21228683|ref|NP_634605.1| - 9.4 6.0 16.7 0.44 10.2 0.1 3.5 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 NUDIX PF00293.23 gi|21228684|ref|NP_634606.1| - 1.4e-13 50.6 0.0 1.8e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain MttA_Hcf106 PF02416.11 gi|21228685|ref|NP_634607.1| - 1.5e-17 62.4 1.8 2.2e-17 61.8 1.3 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family MttA_Hcf106 PF02416.11 gi|21228686|ref|NP_634608.1| - 8.5e-14 50.3 5.6 2e-13 49.1 3.9 1.8 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1510 PF07423.6 gi|21228686|ref|NP_634608.1| - 0.0024 17.2 0.3 0.0029 17.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1510) APG17 PF04108.7 gi|21228686|ref|NP_634608.1| - 0.05 12.3 0.0 0.06 12.1 0.0 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 Peptidase_S49_N PF08496.5 gi|21228686|ref|NP_634608.1| - 0.18 11.5 0.7 0.23 11.2 0.5 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal NARP1 PF12569.3 gi|21228686|ref|NP_634608.1| - 2 7.0 8.6 2.3 6.8 5.9 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TatC PF00902.13 gi|21228687|ref|NP_634609.1| - 8.6e-50 169.1 26.5 1e-49 168.8 18.4 1.0 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) TatC PF00902.13 gi|21228688|ref|NP_634610.1| - 3e-44 150.9 28.0 3.8e-44 150.6 19.4 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) NosD PF05048.8 gi|21228689|ref|NP_634611.1| - 9.2e-57 191.8 30.2 9.2e-57 191.8 20.9 4.1 2 2 2 4 4 4 1 Periplasmic copper-binding protein (NosD) Lactonase PF10282.4 gi|21228689|ref|NP_634611.1| - 7.4e-17 61.4 5.5 4.3e-05 22.7 0.1 3.3 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|21228689|ref|NP_634611.1| - 1.2e-09 37.9 8.0 0.0011 18.3 0.5 4.4 1 1 3 4 4 4 3 SMP-30/Gluconolaconase/LRE-like region PKD PF00801.15 gi|21228689|ref|NP_634611.1| - 1.7e-08 34.0 3.1 1.7e-08 34.0 2.2 2.2 2 0 0 2 2 2 1 PKD domain Cytochrom_D1 PF02239.11 gi|21228689|ref|NP_634611.1| - 2.6e-08 32.5 4.2 0.0013 17.1 0.1 2.9 1 1 2 3 3 3 3 Cytochrome D1 heme domain Arylesterase PF01731.15 gi|21228689|ref|NP_634611.1| - 3.7e-07 30.0 4.0 0.29 11.1 0.0 6.2 3 1 3 6 6 6 1 Arylesterase Beta_helix PF13229.1 gi|21228689|ref|NP_634611.1| - 4.5e-07 29.7 43.7 4.5e-07 29.7 30.3 5.7 2 2 1 4 4 3 2 Right handed beta helix region NHL PF01436.16 gi|21228689|ref|NP_634611.1| - 3e-05 23.7 17.4 1.6 8.8 0.1 7.0 7 1 1 8 8 8 3 NHL repeat PQQ_3 PF13570.1 gi|21228689|ref|NP_634611.1| - 0.0031 17.7 22.4 0.51 10.6 0.8 6.3 5 1 0 5 5 5 1 PQQ-like domain PD40 PF07676.7 gi|21228689|ref|NP_634611.1| - 0.0052 16.4 0.7 93 2.8 0.0 5.2 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat PQQ PF01011.16 gi|21228689|ref|NP_634611.1| - 0.0076 15.7 2.9 13 5.4 0.2 4.3 3 0 0 3 3 3 0 PQQ enzyme repeat Phytase-like PF13449.1 gi|21228689|ref|NP_634611.1| - 0.075 12.2 0.0 9 5.4 0.0 3.0 3 1 0 3 3 3 0 Esterase-like activity of phytase DUF3312 PF11768.3 gi|21228689|ref|NP_634611.1| - 0.22 9.7 0.2 0.51 8.4 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3312) PBCV_basic_adap PF08789.5 gi|21228689|ref|NP_634611.1| - 2.7 7.7 5.2 30 4.3 0.1 3.3 4 0 0 4 4 3 0 PBCV-specific basic adaptor domain DDE_Tnp_IS66 PF03050.9 gi|21228690|ref|NP_634612.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21228690|ref|NP_634612.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21228690|ref|NP_634612.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21228690|ref|NP_634612.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21228690|ref|NP_634612.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21228690|ref|NP_634612.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain DnaB_C PF03796.10 gi|21228691|ref|NP_634613.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21228691|ref|NP_634613.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21228691|ref|NP_634613.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21228691|ref|NP_634613.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) EamA PF00892.15 gi|21228693|ref|NP_634615.1| - 3.8e-20 72.2 13.7 4.4e-20 71.9 9.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family EmrE PF13536.1 gi|21228693|ref|NP_634615.1| - 2.2e-05 24.6 8.1 6.7e-05 23.0 5.6 1.8 1 1 0 1 1 1 1 Multidrug resistance efflux transporter TPT PF03151.11 gi|21228693|ref|NP_634615.1| - 0.01 15.5 9.8 0.02 14.5 6.8 1.5 1 1 0 1 1 1 0 Triose-phosphate Transporter family UPF0546 PF10639.4 gi|21228693|ref|NP_634615.1| - 0.021 14.6 3.5 0.021 14.6 1.6 1.6 1 1 0 1 1 1 0 Uncharacterised protein family UPF0546 DAD PF02109.11 gi|21228693|ref|NP_634615.1| - 0.28 11.2 5.1 0.18 11.8 2.2 1.7 1 1 1 2 2 2 0 DAD family PepSY_TM_2 PF13703.1 gi|21228693|ref|NP_634615.1| - 2.5 8.3 5.5 3.7 7.7 0.1 2.7 1 1 1 2 2 2 0 PepSY-associated TM helix DUF4011 PF13195.1 gi|21228694|ref|NP_634616.1| - 1.5e-46 158.6 1.8 5.4e-46 156.8 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF4011) AAA_11 PF13086.1 gi|21228694|ref|NP_634616.1| - 3.3e-16 59.5 0.2 2.1e-08 34.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF3320 PF11784.3 gi|21228694|ref|NP_634616.1| - 2.6e-15 55.6 0.3 6.8e-15 54.3 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3320) AAA_12 PF13087.1 gi|21228694|ref|NP_634616.1| - 2.2e-13 50.0 0.0 4.7e-13 48.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21228694|ref|NP_634616.1| - 3.3e-12 45.9 0.1 7.5e-12 44.8 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_30 PF13604.1 gi|21228694|ref|NP_634616.1| - 1e-06 28.4 0.3 0.00082 18.9 0.2 2.5 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.4 gi|21228694|ref|NP_634616.1| - 3.6e-06 26.1 0.1 0.036 13.0 0.0 3.3 3 0 0 3 3 3 2 Uncharacterized conserved protein (DUF2075) Helicase_RecD PF05127.9 gi|21228694|ref|NP_634616.1| - 0.004 16.8 0.1 0.052 13.1 0.0 2.6 3 0 0 3 3 3 1 Helicase UvrD-helicase PF00580.16 gi|21228694|ref|NP_634616.1| - 0.0048 16.2 0.0 0.012 14.8 0.0 1.7 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF559 PF04480.7 gi|21228694|ref|NP_634616.1| - 0.0069 16.0 0.0 0.018 14.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF559) Viral_helicase1 PF01443.13 gi|21228694|ref|NP_634616.1| - 0.0071 15.8 0.1 1.9 7.9 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase ResIII PF04851.10 gi|21228694|ref|NP_634616.1| - 0.018 14.8 0.1 0.94 9.2 0.0 2.9 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit Mab-21 PF03281.9 gi|21228694|ref|NP_634616.1| - 0.021 13.9 0.0 0.039 13.0 0.0 1.3 1 0 0 1 1 1 0 Mab-21 protein AAA_22 PF13401.1 gi|21228694|ref|NP_634616.1| - 0.061 13.4 0.0 0.81 9.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.12 gi|21228694|ref|NP_634616.1| - 0.076 12.4 0.0 0.19 11.1 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_5 PF07728.9 gi|21228694|ref|NP_634616.1| - 0.087 12.5 0.0 0.24 11.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.1 gi|21228694|ref|NP_634616.1| - 0.1 12.5 0.1 0.35 10.8 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain GvpD PF07088.6 gi|21228694|ref|NP_634616.1| - 0.16 10.2 0.0 0.25 9.6 0.0 1.2 1 0 0 1 1 1 0 GvpD gas vesicle protein PSI_PsaF PF02507.10 gi|21228694|ref|NP_634616.1| - 0.18 11.3 0.1 0.39 10.2 0.0 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit III PhoH PF02562.11 gi|21228694|ref|NP_634616.1| - 0.24 10.6 0.1 22 4.1 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein EamA PF00892.15 gi|21228695|ref|NP_634617.1| - 2.9e-31 108.1 29.5 1.3e-16 60.7 5.2 2.3 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21228695|ref|NP_634617.1| - 4.9e-08 33.1 27.5 4.5e-07 30.0 6.6 3.3 3 1 0 3 3 3 2 Multidrug resistance efflux transporter UAA PF08449.6 gi|21228695|ref|NP_634617.1| - 0.00073 18.5 14.4 0.0048 15.8 10.0 2.0 1 1 0 1 1 1 1 UAA transporter family UPF0546 PF10639.4 gi|21228695|ref|NP_634617.1| - 0.059 13.1 9.8 0.3 10.9 0.3 2.8 2 1 1 3 3 3 0 Uncharacterised protein family UPF0546 DUF914 PF06027.7 gi|21228695|ref|NP_634617.1| - 0.26 10.1 8.9 0.83 8.4 3.6 2.1 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF914) TPT PF03151.11 gi|21228695|ref|NP_634617.1| - 0.75 9.4 19.9 0.82 9.3 3.1 3.6 2 2 0 2 2 2 0 Triose-phosphate Transporter family TPR_11 PF13414.1 gi|21228696|ref|NP_634618.1| - 3.8e-57 189.8 21.0 1.1e-12 47.4 0.1 5.5 1 1 3 6 6 6 6 TPR repeat TPR_17 PF13431.1 gi|21228696|ref|NP_634618.1| - 1.3e-48 159.1 6.6 8.5e-05 22.4 0.0 9.4 9 1 0 9 9 9 8 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228696|ref|NP_634618.1| - 2.2e-47 155.1 13.9 2.3e-05 23.9 0.0 9.4 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228696|ref|NP_634618.1| - 2.1e-41 139.7 3.4 4.7e-09 36.6 0.0 5.2 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21228696|ref|NP_634618.1| - 4.4e-38 127.3 13.4 1.1e-05 24.7 0.0 9.0 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228696|ref|NP_634618.1| - 9e-36 118.9 14.6 0.00042 19.8 0.0 9.7 7 1 3 10 10 10 8 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228696|ref|NP_634618.1| - 3.3e-33 113.4 18.3 1.1e-08 34.9 0.5 6.4 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228696|ref|NP_634618.1| - 2.2e-29 99.2 5.5 0.00072 19.9 0.0 9.1 1 1 8 9 9 9 7 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228696|ref|NP_634618.1| - 2.5e-28 95.5 10.4 0.00011 21.6 0.0 9.5 9 1 1 10 10 10 7 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228696|ref|NP_634618.1| - 1.6e-26 92.4 4.4 4.9e-05 23.5 0.1 5.6 3 1 3 6 6 6 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228696|ref|NP_634618.1| - 2.1e-17 62.7 1.5 0.0011 18.7 0.0 6.0 3 2 2 6 6 6 5 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21228696|ref|NP_634618.1| - 4.2e-15 55.0 21.6 0.0059 16.4 0.0 8.4 9 0 0 9 9 8 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228696|ref|NP_634618.1| - 2.9e-12 46.5 10.3 0.012 15.7 0.1 4.8 1 1 6 7 7 7 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|21228696|ref|NP_634618.1| - 3.5e-11 42.7 0.8 0.00054 19.1 0.0 3.9 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_4 PF07721.9 gi|21228696|ref|NP_634618.1| - 3.8e-11 42.2 0.0 1.9 9.1 0.0 7.2 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21228696|ref|NP_634618.1| - 2.9e-10 39.9 7.8 0.3 11.6 0.0 8.0 9 0 0 9 9 8 1 Tetratricopeptide repeat TPR_20 PF14561.1 gi|21228696|ref|NP_634618.1| - 6.3e-10 39.0 1.2 0.06 13.4 0.0 5.6 3 1 1 5 5 5 2 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|21228696|ref|NP_634618.1| - 3.8e-07 29.5 0.2 0.058 12.5 0.0 4.6 3 2 2 5 5 5 1 Coatomer epsilon subunit NARP1 PF12569.3 gi|21228696|ref|NP_634618.1| - 6.9e-06 25.0 4.4 3.8 6.1 0.3 5.1 1 1 2 5 5 5 3 NMDA receptor-regulated protein 1 BTAD PF03704.12 gi|21228696|ref|NP_634618.1| - 3.9e-05 23.9 7.6 0.49 10.7 0.2 4.1 1 1 2 3 3 3 2 Bacterial transcriptional activator domain Sec16_C PF12931.2 gi|21228696|ref|NP_634618.1| - 0.083 12.6 0.6 15 5.2 0.0 3.8 2 2 2 4 4 4 0 Sec23-binding domain of Sec16 MIT PF04212.13 gi|21228696|ref|NP_634618.1| - 0.31 10.9 4.8 8.9 6.2 0.1 4.2 4 2 0 4 4 4 0 MIT (microtubule interacting and transport) domain PvlArgDC PF01862.11 gi|21228697|ref|NP_634619.1| - 1.4e-66 223.1 0.0 1.6e-66 222.9 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) MVL PF12151.3 gi|21228697|ref|NP_634619.1| - 0.062 12.9 0.4 0.098 12.3 0.2 1.3 1 0 0 1 1 1 0 Mannan-binding protein Hydantoinase_A PF01968.13 gi|21228698|ref|NP_634620.1| - 8e-79 264.7 0.1 3.9e-78 262.4 0.0 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21228698|ref|NP_634620.1| - 8.2e-44 149.2 0.2 1.5e-40 138.5 0.0 2.6 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21228698|ref|NP_634620.1| - 7.8e-06 24.4 0.6 0.052 11.8 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21228698|ref|NP_634620.1| - 0.01 15.1 0.0 0.41 9.8 0.0 2.4 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Hydantoinase_A PF01968.13 gi|21228699|ref|NP_634621.1| - 2.7e-11 43.1 0.0 3.6e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Gemin6 PF06372.7 gi|21228699|ref|NP_634621.1| - 0.12 11.6 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Gemin6 protein Hydantoinase_A PF01968.13 gi|21228700|ref|NP_634622.1| - 1.2e-68 231.3 0.0 2.5e-67 227.0 0.0 2.6 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21228700|ref|NP_634622.1| - 2.2e-45 154.3 0.2 8.3e-42 142.6 0.0 2.4 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.1 gi|21228700|ref|NP_634622.1| - 1.2e-05 23.8 0.4 0.074 11.3 0.1 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.15 gi|21228700|ref|NP_634622.1| - 0.063 12.5 0.1 1.8 7.7 0.0 2.2 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Sda PF08970.5 gi|21228700|ref|NP_634622.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.5 1 0 0 1 1 1 0 Sporulation inhibitor A Wax2_C PF12076.3 gi|21228701|ref|NP_634623.1| - 0.068 12.8 0.0 0.068 12.8 0.0 1.2 1 0 0 1 1 1 0 WAX2 C-terminal domain Plasmid_stabil PF05016.9 gi|21228702|ref|NP_634624.1| - 2.5e-07 31.0 0.1 2.7e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF45 PF01863.12 gi|21228703|ref|NP_634625.1| - 2.1e-61 207.2 0.3 2.5e-61 207.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.5 gi|21228703|ref|NP_634625.1| - 2.7e-05 24.1 0.1 4.3e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 WLM domain SprT-like PF10263.4 gi|21228703|ref|NP_634625.1| - 0.022 14.4 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 SprT-like family Vir_act_alpha_C PF10400.4 gi|21228703|ref|NP_634625.1| - 0.023 15.0 0.0 0.055 13.8 0.0 1.5 1 0 0 1 1 1 0 Virulence activator alpha C-term Lar_restr_allev PF14354.1 gi|21228704|ref|NP_634626.1| - 0.01 16.1 7.1 0.13 12.5 0.1 3.3 1 1 1 3 3 3 0 Restriction alleviation protein Lar DUF3797 PF12677.2 gi|21228704|ref|NP_634626.1| - 0.015 14.8 12.3 0.055 13.0 0.1 4.4 5 0 0 5 5 5 0 Domain of unknown function (DUF3797) zf-ribbon_3 PF13248.1 gi|21228704|ref|NP_634626.1| - 0.045 12.9 9.8 0.34 10.1 0.1 3.9 4 0 0 4 4 4 0 zinc-ribbon domain SH2_2 PF14633.1 gi|21228704|ref|NP_634626.1| - 0.051 12.6 0.0 0.084 11.9 0.0 1.3 1 0 0 1 1 1 0 SH2 domain 2TM PF13239.1 gi|21228704|ref|NP_634626.1| - 0.067 13.2 2.4 0.11 12.5 1.7 1.4 1 0 0 1 1 1 0 2TM domain Zn_Tnp_IS1595 PF12760.2 gi|21228704|ref|NP_634626.1| - 0.083 12.7 0.8 0.083 12.7 0.6 3.0 2 1 0 2 2 2 0 Transposase zinc-ribbon domain DUF2207 PF09972.4 gi|21228704|ref|NP_634626.1| - 0.12 10.9 0.5 0.14 10.7 0.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DZR PF12773.2 gi|21228704|ref|NP_634626.1| - 0.22 11.3 11.5 1.4e+02 2.4 8.0 3.2 1 1 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.5 gi|21228704|ref|NP_634626.1| - 0.33 10.4 15.8 0.53 9.8 0.2 4.6 4 1 0 4 4 4 0 A2L zinc ribbon domain Ribosomal_L37e PF01907.14 gi|21228704|ref|NP_634626.1| - 0.57 10.0 7.5 4.2 7.2 0.0 3.6 4 0 0 4 4 3 0 Ribosomal protein L37e DUF3784 PF12650.2 gi|21228704|ref|NP_634626.1| - 0.7 9.8 8.5 0.56 10.1 4.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) FUR PF01475.14 gi|21228704|ref|NP_634626.1| - 0.75 9.7 4.4 2.3 8.1 0.1 3.0 1 1 2 3 3 3 0 Ferric uptake regulator family HypA PF01155.14 gi|21228704|ref|NP_634626.1| - 0.81 9.3 10.3 1.7 8.3 1.4 2.5 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family Desulfoferrod_N PF06397.7 gi|21228704|ref|NP_634626.1| - 0.92 8.9 14.6 0.98 8.8 0.3 4.2 5 0 0 5 5 5 0 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.10 gi|21228704|ref|NP_634626.1| - 2 8.2 14.0 1.7 8.4 0.1 3.7 4 0 0 4 4 3 0 BED zinc finger zinc_ribbon_2 PF13240.1 gi|21228704|ref|NP_634626.1| - 2.8 7.5 15.6 0.96 9.0 1.1 3.8 4 0 0 4 4 4 0 zinc-ribbon domain SdpI PF13630.1 gi|21228704|ref|NP_634626.1| - 3.5 7.4 8.6 6 6.6 5.9 1.4 1 0 0 1 1 1 0 SdpI/YhfL protein family TF_Zn_Ribbon PF08271.7 gi|21228704|ref|NP_634626.1| - 6.6 6.1 10.2 13 5.1 0.1 4.2 4 0 0 4 4 4 0 TFIIB zinc-binding FYVE PF01363.16 gi|21228704|ref|NP_634626.1| - 7.4 6.5 16.6 37 4.3 8.4 3.5 2 1 0 2 2 2 0 FYVE zinc finger C1_1 PF00130.17 gi|21228704|ref|NP_634626.1| - 7.5 6.3 14.0 0.15 11.8 1.1 3.1 3 1 0 3 3 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.14 gi|21228705|ref|NP_634627.1| - 0.0036 16.9 6.2 0.3 10.8 0.2 2.3 1 1 1 2 2 2 2 Hydrogenase expression/synthesis hypA family YhfH PF14149.1 gi|21228705|ref|NP_634627.1| - 0.0077 16.0 6.7 1.7 8.4 0.0 3.5 3 0 0 3 3 3 2 YhfH-like protein zf-ribbon_3 PF13248.1 gi|21228705|ref|NP_634627.1| - 0.013 14.7 6.3 7.8 5.8 0.8 3.9 3 1 0 3 3 3 0 zinc-ribbon domain zf-AN1 PF01428.11 gi|21228705|ref|NP_634627.1| - 0.047 13.5 13.1 2.3 8.1 0.1 4.1 4 0 0 4 4 4 0 AN1-like Zinc finger zf-C2HC_2 PF13913.1 gi|21228705|ref|NP_634627.1| - 0.072 12.7 0.6 0.072 12.7 0.4 3.5 4 0 0 4 4 3 0 zinc-finger of a C2HC-type FYVE PF01363.16 gi|21228705|ref|NP_634627.1| - 0.077 12.8 10.1 0.15 11.9 0.9 2.8 1 1 1 2 2 2 0 FYVE zinc finger DZR PF12773.2 gi|21228705|ref|NP_634627.1| - 0.093 12.5 10.0 30 4.5 6.9 3.0 1 1 0 1 1 1 0 Double zinc ribbon zf-trcl PF13451.1 gi|21228705|ref|NP_634627.1| - 0.093 12.3 8.5 1.5 8.4 0.1 3.9 4 0 0 4 4 4 0 Probable zinc-binding domain DUF866 PF05907.8 gi|21228705|ref|NP_634627.1| - 0.23 10.9 9.4 0.18 11.3 2.7 2.1 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF866) zinc_ribbon_5 PF13719.1 gi|21228705|ref|NP_634627.1| - 0.48 10.0 6.9 13 5.4 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|21228705|ref|NP_634627.1| - 0.57 9.7 12.7 5.9 6.4 0.6 4.2 4 0 0 4 4 4 0 A2L zinc ribbon domain zf-FCS PF06467.9 gi|21228705|ref|NP_634627.1| - 0.57 9.8 16.9 2.1 8.0 0.2 4.0 3 1 1 4 4 4 0 MYM-type Zinc finger with FCS sequence motif zinc_ribbon_4 PF13717.1 gi|21228705|ref|NP_634627.1| - 0.72 9.6 7.0 14 5.4 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain DUF2387 PF09526.5 gi|21228705|ref|NP_634627.1| - 1.3 9.0 0.1 1.3 9.0 0.0 2.6 3 0 0 3 3 3 0 Probable metal-binding protein (DUF2387) zf-C2H2 PF00096.21 gi|21228705|ref|NP_634627.1| - 2.5 8.6 18.5 3.9 8.0 0.4 4.6 4 0 0 4 4 4 0 Zinc finger, C2H2 type TF_Zn_Ribbon PF08271.7 gi|21228705|ref|NP_634627.1| - 2.6 7.4 11.3 5.1 6.4 0.1 4.0 3 1 0 3 3 3 0 TFIIB zinc-binding Rpr2 PF04032.11 gi|21228705|ref|NP_634627.1| - 4 7.3 11.3 0.69 9.8 2.1 2.9 3 0 0 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-BED PF02892.10 gi|21228705|ref|NP_634627.1| - 5.9 6.7 27.0 4.2 7.1 0.7 4.2 2 1 2 4 4 4 0 BED zinc finger Zn-ribbon_8 PF09723.5 gi|21228705|ref|NP_634627.1| - 6 6.8 17.7 5 7.1 0.5 4.1 3 1 0 3 3 3 0 Zinc ribbon domain zf-H2C2_2 PF13465.1 gi|21228705|ref|NP_634627.1| - 7.2 7.1 22.3 13 6.3 1.4 4.4 4 0 0 4 4 4 0 Zinc-finger double domain DUF983 PF06170.7 gi|21228705|ref|NP_634627.1| - 8.9 6.4 6.6 15 5.7 0.1 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF983) VIT1 PF01988.14 gi|21228706|ref|NP_634628.1| - 0.032 13.6 0.0 0.036 13.5 0.0 1.0 1 0 0 1 1 1 0 VIT family DUF4158 PF13700.1 gi|21228706|ref|NP_634628.1| - 0.066 12.6 0.1 0.071 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) DNA_pol_alpha_N PF12254.3 gi|21228706|ref|NP_634628.1| - 0.18 11.6 2.4 0.21 11.4 1.6 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal Plasmid_stabil PF05016.9 gi|21228707|ref|NP_634629.1| - 1.8e-09 37.8 0.1 2.1e-09 37.6 0.1 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Gp49 PF05973.9 gi|21228707|ref|NP_634629.1| - 0.012 15.6 0.1 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) Plasmid_Txe PF06769.8 gi|21228707|ref|NP_634629.1| - 0.024 14.4 0.1 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded toxin Txe SPOR PF05036.8 gi|21228707|ref|NP_634629.1| - 0.14 12.3 0.0 0.24 11.5 0.0 1.5 1 1 0 1 1 1 0 Sporulation related domain Fic PF02661.13 gi|21228708|ref|NP_634630.1| - 8.8e-23 80.8 0.0 2.3e-22 79.4 0.0 1.8 1 0 0 1 1 1 1 Fic/DOC family HTH_DeoR PF08220.7 gi|21228708|ref|NP_634630.1| - 0.00012 21.5 0.1 0.00033 20.1 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.1 gi|21228708|ref|NP_634630.1| - 0.00021 20.6 0.1 0.00061 19.1 0.1 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fic_N PF13784.1 gi|21228708|ref|NP_634630.1| - 0.00085 19.1 0.4 0.036 13.9 0.1 2.6 2 0 0 2 2 2 1 Fic/DOC family N-terminal TrmB PF01978.14 gi|21228708|ref|NP_634630.1| - 0.04 13.6 1.4 0.12 12.1 0.0 2.5 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DUF4172 PF13776.1 gi|21228708|ref|NP_634630.1| - 0.093 12.8 0.1 0.31 11.1 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4172) Phage_rep_O PF04492.8 gi|21228708|ref|NP_634630.1| - 0.094 12.9 0.3 0.22 11.7 0.2 1.7 1 1 0 1 1 1 0 Bacteriophage replication protein O DUF86 PF01934.12 gi|21228709|ref|NP_634631.1| - 2.3e-26 91.7 0.0 2.7e-26 91.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Barstar PF01337.13 gi|21228709|ref|NP_634631.1| - 0.038 13.8 0.0 0.084 12.7 0.0 1.6 1 1 0 1 1 1 0 Barstar (barnase inhibitor) NTP_transf_2 PF01909.18 gi|21228710|ref|NP_634632.1| - 1.4e-15 57.3 1.7 1.7e-15 57.0 1.2 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21228710|ref|NP_634632.1| - 0.0073 16.3 0.0 0.0078 16.2 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm PAC2 PF09754.4 gi|21228710|ref|NP_634632.1| - 0.03 14.1 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 PAC2 family DUF2003 PF09404.5 gi|21228710|ref|NP_634632.1| - 0.05 12.0 0.0 0.056 11.8 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF2003) NTP_transf_2 PF01909.18 gi|21228711|ref|NP_634633.1| - 3.1e-15 56.2 0.2 3.6e-15 56.0 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|21228711|ref|NP_634633.1| - 0.046 13.7 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm MdcG PF10620.4 gi|21228711|ref|NP_634633.1| - 0.13 11.8 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG ResIII PF04851.10 gi|21228712|ref|NP_634634.1| - 7.5e-41 139.9 0.5 1.5e-40 138.9 0.4 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|21228712|ref|NP_634634.1| - 3.1e-10 39.8 0.0 4.6e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 gi|21228712|ref|NP_634634.1| - 4.1e-06 25.8 0.1 8.3e-05 21.5 0.1 2.1 1 1 0 1 1 1 1 SNF2 family N-terminal domain AAA_11 PF13086.1 gi|21228712|ref|NP_634634.1| - 0.00054 19.6 0.2 0.055 13.0 0.0 2.1 1 1 0 2 2 2 1 AAA domain DUF2075 PF09848.4 gi|21228712|ref|NP_634634.1| - 0.00062 18.8 0.0 0.00091 18.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|21228712|ref|NP_634634.1| - 0.00076 19.1 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Part of AAA domain AAA_34 PF13872.1 gi|21228712|ref|NP_634634.1| - 0.0036 16.1 0.2 0.008 14.9 0.1 1.5 1 1 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 PhoH PF02562.11 gi|21228712|ref|NP_634634.1| - 0.052 12.7 0.0 0.08 12.1 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_22 PF13401.1 gi|21228712|ref|NP_634634.1| - 0.055 13.6 0.0 0.097 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain BOFC_N PF08977.5 gi|21228712|ref|NP_634634.1| - 0.055 13.2 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Bypass of Forespore C, N terminal DAO PF01266.19 gi|21228713|ref|NP_634635.1| - 5e-14 51.9 0.3 5.2e-06 25.6 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|21228713|ref|NP_634635.1| - 4.4e-13 48.8 2.0 9.7e-05 21.3 0.3 3.2 3 0 0 3 3 3 3 FAD binding domain Pyr_redox_2 PF07992.9 gi|21228713|ref|NP_634635.1| - 4.9e-13 49.4 0.4 6.4e-06 26.1 0.2 3.3 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21228713|ref|NP_634635.1| - 2.3e-12 46.4 0.2 0.00068 18.5 0.0 3.2 3 0 0 3 3 3 3 Glucose inhibited division protein A HI0933_like PF03486.9 gi|21228713|ref|NP_634635.1| - 3.2e-08 32.4 1.7 1.7e-06 26.7 0.1 2.5 3 0 0 3 3 3 2 HI0933-like protein Thi4 PF01946.12 gi|21228713|ref|NP_634635.1| - 5.8e-06 25.5 0.4 8.7e-05 21.7 0.1 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.1 gi|21228713|ref|NP_634635.1| - 6.1e-06 26.1 0.2 2.3e-05 24.3 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.7 gi|21228713|ref|NP_634635.1| - 9.5e-06 24.7 0.1 0.00038 19.5 0.1 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_3 PF01494.14 gi|21228713|ref|NP_634635.1| - 0.0012 18.0 0.1 0.0057 15.7 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|21228713|ref|NP_634635.1| - 0.0035 17.4 0.6 0.0093 16.0 0.5 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.1 gi|21228713|ref|NP_634635.1| - 0.0044 16.8 0.0 0.26 11.0 0.0 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_oxidored PF12831.2 gi|21228713|ref|NP_634635.1| - 0.01 14.9 0.9 0.28 10.2 0.4 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.22 gi|21228713|ref|NP_634635.1| - 0.08 13.3 0.0 2.1 8.8 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DEAD PF00270.24 gi|21228714|ref|NP_634636.1| - 9.2e-25 87.0 0.0 1.7e-24 86.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.5 gi|21228714|ref|NP_634636.1| - 1.5e-19 70.3 0.1 3.6e-18 65.9 0.0 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.26 gi|21228714|ref|NP_634636.1| - 1.8e-13 50.1 0.0 4e-12 45.8 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain MC1 PF05854.6 gi|21228714|ref|NP_634636.1| - 0.0055 16.6 0.4 0.012 15.5 0.3 1.5 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 LemA PF04011.7 gi|21228715|ref|NP_634637.1| - 1.3e-63 213.4 4.2 1.5e-63 213.3 2.9 1.0 1 0 0 1 1 1 1 LemA family AAA_27 PF13514.1 gi|21228715|ref|NP_634637.1| - 0.06 11.0 0.8 0.074 10.7 0.5 1.0 1 0 0 1 1 1 0 AAA domain BBP1_N PF15271.1 gi|21228715|ref|NP_634637.1| - 0.09 13.1 0.0 0.12 12.7 0.0 1.3 1 1 0 1 1 1 0 Spindle pole body component BBP1, Mps2-binding protein DUF2207 PF09972.4 gi|21228716|ref|NP_634638.1| - 3.7e-142 474.5 1.0 4.7e-142 474.1 0.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) NMN_transporter PF04973.7 gi|21228716|ref|NP_634638.1| - 0.019 14.4 1.9 0.046 13.1 0.7 2.0 2 0 0 2 2 2 0 Nicotinamide mononucleotide transporter CRPA PF05745.6 gi|21228716|ref|NP_634638.1| - 0.032 14.0 0.1 0.072 12.8 0.1 1.5 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) DUF423 PF04241.10 gi|21228716|ref|NP_634638.1| - 0.042 13.7 0.2 0.092 12.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF423) ESSS PF10183.4 gi|21228716|ref|NP_634638.1| - 0.055 13.8 0.0 0.17 12.2 0.0 1.8 1 0 0 1 1 1 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) DUF1673 PF07895.6 gi|21228716|ref|NP_634638.1| - 0.075 12.5 3.8 0.88 9.0 2.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1673) DUF2207 PF09972.4 gi|21228717|ref|NP_634639.1| - 9e-95 318.1 10.2 9.1e-94 314.8 7.1 2.0 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) Ribosomal_L15e PF00827.12 gi|21228718|ref|NP_634640.1| - 5.2e-84 280.5 7.3 6.2e-84 280.2 5.0 1.0 1 0 0 1 1 1 1 Ribosomal L15 RNA_binding PF01877.12 gi|21228719|ref|NP_634641.1| - 5.8e-37 126.3 0.7 6.8e-37 126.1 0.5 1.0 1 0 0 1 1 1 1 RNA binding RPAP1_N PF08621.5 gi|21228719|ref|NP_634641.1| - 0.052 13.1 0.2 0.1 12.2 0.1 1.5 1 0 0 1 1 1 0 RPAP1-like, N-terminal RNase_P_p30 PF01876.11 gi|21228720|ref|NP_634642.1| - 2.6e-38 130.5 0.0 3.2e-38 130.3 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit p30 Amidohydro_4 PF13147.1 gi|21228720|ref|NP_634642.1| - 0.011 15.7 0.0 0.032 14.2 0.0 1.7 1 1 1 2 2 2 0 Amidohydrolase NAD_binding_11 PF14833.1 gi|21228720|ref|NP_634642.1| - 0.091 12.8 0.2 12 5.9 0.0 2.3 1 1 1 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PNTB PF02233.11 gi|21228720|ref|NP_634642.1| - 0.16 10.7 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit RNase_P_Rpp14 PF01900.14 gi|21228721|ref|NP_634643.1| - 6.4e-21 74.2 0.0 7.3e-21 74.0 0.0 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family Proteasome PF00227.21 gi|21228722|ref|NP_634644.1| - 9.3e-62 207.6 0.6 1.2e-61 207.2 0.4 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|21228722|ref|NP_634644.1| - 4.1e-15 54.7 0.4 1.2e-14 53.2 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.13 gi|21228723|ref|NP_634645.1| - 7.9e-26 89.6 0.1 1.4e-25 88.9 0.0 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|21228723|ref|NP_634645.1| - 8.8e-19 67.4 0.1 1.2e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain DegS PF05384.6 gi|21228723|ref|NP_634645.1| - 0.033 13.4 0.2 1.5 7.9 0.1 2.3 1 1 1 2 2 2 0 Sensor protein DegS EFG_C PF00679.19 gi|21228723|ref|NP_634645.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_1 PF00013.24 gi|21228724|ref|NP_634646.1| - 7.5e-11 41.5 0.3 1.7e-10 40.3 0.2 1.7 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.1 gi|21228724|ref|NP_634646.1| - 2.3e-08 33.1 0.0 5.2e-08 32.0 0.0 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_3 PF13014.1 gi|21228724|ref|NP_634646.1| - 2.5e-06 27.0 0.2 5.9e-06 25.8 0.1 1.7 1 0 0 1 1 1 1 KH domain S1 PF00575.18 gi|21228724|ref|NP_634646.1| - 6.7e-06 26.0 0.1 6.7e-06 26.0 0.1 2.4 4 0 0 4 4 4 1 S1 RNA binding domain KH_2 PF07650.12 gi|21228724|ref|NP_634646.1| - 0.00063 19.2 0.2 0.0026 17.2 0.1 2.1 1 1 0 1 1 1 1 KH domain RNase_PH PF01138.16 gi|21228725|ref|NP_634647.1| - 5.6e-33 114.0 0.0 5.6e-33 114.0 0.0 2.9 3 0 0 3 3 3 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|21228725|ref|NP_634647.1| - 1.2e-17 63.5 0.2 4.9e-17 61.6 0.1 2.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Exonuc_VII_L PF02601.10 gi|21228725|ref|NP_634647.1| - 0.97 8.5 12.3 1.8 7.6 8.6 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit RNase_PH PF01138.16 gi|21228726|ref|NP_634648.1| - 3.5e-30 105.0 0.0 5.9e-30 104.2 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.10 gi|21228726|ref|NP_634648.1| - 2.8e-13 49.6 0.6 5.5e-13 48.6 0.4 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.14 gi|21228727|ref|NP_634649.1| - 5.4e-29 99.8 2.8 6.2e-29 99.7 1.9 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.2 gi|21228727|ref|NP_634649.1| - 0.00033 20.3 2.2 0.00051 19.8 1.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.17 gi|21228727|ref|NP_634649.1| - 0.0045 16.6 0.5 0.0065 16.1 0.4 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF4379 PF14311.1 gi|21228727|ref|NP_634649.1| - 0.021 14.6 3.1 0.078 12.8 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zf-H2C2_2 PF13465.1 gi|21228727|ref|NP_634649.1| - 0.043 14.1 0.4 6.7 7.1 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger double domain A2L_zn_ribbon PF08792.5 gi|21228727|ref|NP_634649.1| - 0.058 12.8 1.7 0.55 9.7 0.3 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|21228727|ref|NP_634649.1| - 0.059 12.9 0.3 0.059 12.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21228727|ref|NP_634649.1| - 0.08 12.6 0.4 0.08 12.6 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|21228727|ref|NP_634649.1| - 0.086 12.8 1.7 3.1 7.8 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain UPF0547 PF10571.4 gi|21228727|ref|NP_634649.1| - 0.12 12.1 2.0 0.31 10.7 0.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF951 PF06107.6 gi|21228727|ref|NP_634649.1| - 0.13 11.7 1.4 0.24 10.9 1.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) TFIIS_C PF01096.13 gi|21228727|ref|NP_634649.1| - 0.14 11.7 3.0 2.2 7.9 0.4 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-C2H2_4 PF13894.1 gi|21228727|ref|NP_634649.1| - 0.23 11.8 1.8 1.4 9.4 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-UBP PF02148.14 gi|21228727|ref|NP_634649.1| - 0.32 11.1 1.8 2.2 8.4 1.7 1.8 1 1 1 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein Nudix_N_2 PF14803.1 gi|21228727|ref|NP_634649.1| - 0.33 10.6 3.1 11 5.8 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.8 gi|21228728|ref|NP_634650.1| - 1.4e-09 37.2 8.7 2.1e-09 36.6 6.0 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.1 gi|21228728|ref|NP_634650.1| - 3.8e-06 26.2 8.0 0.00012 21.4 1.6 1.5 1 1 1 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|21228728|ref|NP_634650.1| - 0.00021 20.5 1.4 0.00026 20.2 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|21228728|ref|NP_634650.1| - 0.00029 19.9 0.4 0.048 12.8 0.0 2.0 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.14 gi|21228728|ref|NP_634650.1| - 0.00079 19.0 0.5 0.00079 19.0 0.3 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family zf-ISL3 PF14690.1 gi|21228728|ref|NP_634650.1| - 0.0021 18.0 4.3 0.013 15.5 0.5 2.1 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Cys_rich_CPXG PF14255.1 gi|21228728|ref|NP_634650.1| - 0.003 17.3 1.9 0.016 15.0 0.1 2.0 2 0 0 2 2 2 1 Cysteine-rich CPXCG OrfB_Zn_ribbon PF07282.6 gi|21228728|ref|NP_634650.1| - 0.0031 17.1 2.4 0.007 16.0 1.6 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain DUF951 PF06107.6 gi|21228728|ref|NP_634650.1| - 0.0039 16.6 3.7 0.087 12.3 0.2 2.0 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF951) Zn_Tnp_IS1595 PF12760.2 gi|21228728|ref|NP_634650.1| - 0.0081 15.9 2.2 0.24 11.2 0.1 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain Prok-RING_1 PF14446.1 gi|21228728|ref|NP_634650.1| - 0.0095 15.6 1.9 1.1 8.9 0.0 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 CpXC PF14353.1 gi|21228728|ref|NP_634650.1| - 0.0096 15.8 2.4 0.81 9.6 0.1 2.0 1 1 1 2 2 2 2 CpXC protein zinc_ribbon_5 PF13719.1 gi|21228728|ref|NP_634650.1| - 0.011 15.3 3.6 0.19 11.3 2.5 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21228728|ref|NP_634650.1| - 0.015 15.0 4.1 0.31 10.7 2.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.2 gi|21228728|ref|NP_634650.1| - 0.02 14.7 1.0 0.031 14.0 0.7 1.4 1 1 0 1 1 1 0 Double zinc ribbon TFIIS_C PF01096.13 gi|21228728|ref|NP_634650.1| - 0.027 14.1 2.7 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_6 PF14599.1 gi|21228728|ref|NP_634650.1| - 0.035 13.9 1.6 0.045 13.5 1.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon DUF329 PF03884.9 gi|21228728|ref|NP_634650.1| - 0.042 13.3 2.2 2.4 7.7 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF329) zf-RING_3 PF14369.1 gi|21228728|ref|NP_634650.1| - 0.045 13.7 0.8 0.063 13.2 0.5 1.3 1 0 0 1 1 1 0 zinc-finger zf-AN1 PF01428.11 gi|21228728|ref|NP_634650.1| - 0.046 13.5 1.5 0.12 12.2 1.1 1.6 1 1 1 2 2 2 0 AN1-like Zinc finger zf-Di19 PF05605.7 gi|21228728|ref|NP_634650.1| - 0.065 13.3 0.3 0.52 10.4 0.0 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding C1_1 PF00130.17 gi|21228728|ref|NP_634650.1| - 0.067 12.9 1.6 0.1 12.3 1.1 1.4 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_4 PF13894.1 gi|21228728|ref|NP_634650.1| - 0.075 13.4 1.1 2.4 8.6 0.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger DUF2072 PF09845.4 gi|21228728|ref|NP_634650.1| - 0.076 12.9 1.0 0.073 13.0 0.7 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) FANCL_C PF11793.3 gi|21228728|ref|NP_634650.1| - 0.081 12.9 1.7 0.62 10.0 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Ogr_Delta PF04606.7 gi|21228728|ref|NP_634650.1| - 0.089 12.4 1.6 0.79 9.4 0.1 2.0 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger DUF2197 PF09963.4 gi|21228728|ref|NP_634650.1| - 0.19 11.7 2.4 2.6 8.0 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Cys_rich_KTR PF14205.1 gi|21228728|ref|NP_634650.1| - 0.2 11.1 5.1 0.76 9.2 0.3 2.1 1 1 1 2 2 2 0 Cysteine-rich KTR DiS_P_DiS PF06750.8 gi|21228728|ref|NP_634650.1| - 0.21 11.4 2.7 5.9 6.7 0.2 2.0 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain zf-LITAF-like PF10601.4 gi|21228728|ref|NP_634650.1| - 0.21 11.4 2.3 4.4 7.2 0.1 2.1 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain DUF2752 PF10825.3 gi|21228728|ref|NP_634650.1| - 0.23 11.5 0.1 0.23 11.5 0.1 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF2752) A2L_zn_ribbon PF08792.5 gi|21228728|ref|NP_634650.1| - 0.24 10.9 1.9 5 6.7 0.0 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain Ribosomal_S27e PF01667.12 gi|21228728|ref|NP_634650.1| - 0.25 10.9 1.7 1.1 8.8 0.0 1.8 1 1 0 1 1 1 0 Ribosomal protein S27 zf-TFIIB PF13453.1 gi|21228728|ref|NP_634650.1| - 0.36 10.0 2.3 0.72 9.0 1.6 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger Cript PF10235.4 gi|21228728|ref|NP_634650.1| - 0.42 11.0 2.5 0.71 10.2 1.8 1.5 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT zf-FCS PF06467.9 gi|21228728|ref|NP_634650.1| - 0.66 9.6 4.6 0.71 9.5 0.1 2.1 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Desulfoferrod_N PF06397.7 gi|21228728|ref|NP_634650.1| - 1 8.7 4.5 2.4 7.5 0.4 2.1 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain Mu-like_Com PF10122.4 gi|21228728|ref|NP_634650.1| - 1.1 8.3 6.3 2.2 7.4 0.1 2.2 1 1 1 2 2 2 0 Mu-like prophage protein Com DUF2296 PF10058.4 gi|21228728|ref|NP_634650.1| - 1.1 9.0 4.6 25 4.7 3.0 2.1 1 1 1 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Zn-ribbon_8 PF09723.5 gi|21228728|ref|NP_634650.1| - 1.2 9.0 7.7 8.1 6.4 5.4 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zf-FPG_IleRS PF06827.9 gi|21228728|ref|NP_634650.1| - 2.1 8.0 7.4 2.9 7.6 0.3 2.4 2 1 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-C2H2 PF00096.21 gi|21228728|ref|NP_634650.1| - 2.1 8.8 4.4 9.2 6.8 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_ribbon_recom PF13408.1 gi|21228728|ref|NP_634650.1| - 4 7.7 6.5 1.2 9.4 0.4 2.1 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain UPF0547 PF10571.4 gi|21228728|ref|NP_634650.1| - 9.2 6.0 9.3 16 5.2 5.4 2.1 2 1 0 2 2 1 0 Uncharacterised protein family UPF0547 Brix PF04427.13 gi|21228729|ref|NP_634651.1| - 1.7e-06 27.7 0.0 3.4e-06 26.8 0.0 1.6 1 1 0 1 1 1 1 Brix domain Pcc1 PF09341.5 gi|21228730|ref|NP_634652.1| - 4.2e-19 68.3 0.5 4.7e-19 68.1 0.4 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4468 PF14730.1 gi|21228730|ref|NP_634652.1| - 0.065 12.9 0.0 0.074 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold IRS PF02174.12 gi|21228730|ref|NP_634652.1| - 0.084 12.4 0.2 0.22 11.1 0.0 1.7 1 1 1 2 2 2 0 PTB domain (IRS-1 type) CHASE4 PF05228.8 gi|21228731|ref|NP_634653.1| - 2.1e-43 147.7 0.1 8.9e-42 142.4 0.0 2.5 2 1 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.21 gi|21228731|ref|NP_634653.1| - 4.1e-28 97.3 0.0 7.8e-28 96.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21228731|ref|NP_634653.1| - 1.9e-20 72.5 0.0 4.8e-20 71.3 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|21228731|ref|NP_634653.1| - 2.8e-13 49.8 0.0 1.7e-12 47.3 0.0 2.2 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|21228731|ref|NP_634653.1| - 3.9e-10 40.0 0.0 1.1e-09 38.5 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|21228731|ref|NP_634653.1| - 3.6e-05 23.5 0.0 0.00012 21.7 0.0 2.0 1 0 0 1 1 1 1 PAS fold PAS_10 PF13596.1 gi|21228731|ref|NP_634653.1| - 0.001 19.2 0.0 0.0052 17.0 0.0 2.2 1 1 0 1 1 1 1 PAS domain HAMP PF00672.20 gi|21228731|ref|NP_634653.1| - 0.0054 16.8 0.0 0.0054 16.8 0.0 1.9 2 0 0 2 2 2 1 HAMP domain PAS_8 PF13188.1 gi|21228731|ref|NP_634653.1| - 0.011 15.5 0.0 0.052 13.4 0.0 2.2 1 0 0 1 1 1 0 PAS domain CBS PF00571.23 gi|21228731|ref|NP_634653.1| - 0.066 13.0 0.0 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 CBS domain NosD PF05048.8 gi|21228732|ref|NP_634654.1| - 8.7e-53 178.8 60.5 2e-52 177.6 28.9 4.5 2 2 1 5 5 5 2 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|21228732|ref|NP_634654.1| - 8.9e-23 79.8 15.2 1.1e-15 57.1 1.2 2.6 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|21228732|ref|NP_634654.1| - 2.4e-14 53.4 90.7 3.8e-10 39.7 31.1 5.9 3 3 1 4 4 4 2 Right handed beta helix region Kelch_4 PF13418.1 gi|21228732|ref|NP_634654.1| - 0.00076 19.1 3.0 21 4.9 0.0 6.1 6 0 0 6 6 6 2 Galactose oxidase, central domain Prok-JAB PF14464.1 gi|21228733|ref|NP_634655.1| - 1.1e-11 44.1 0.0 1.4e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain JAB PF01398.16 gi|21228733|ref|NP_634655.1| - 0.0024 17.5 0.0 0.0046 16.6 0.0 1.5 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease RadC PF04002.10 gi|21228733|ref|NP_634655.1| - 0.084 12.5 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 RadC-like JAB domain Toxin-JAB1 PF15659.1 gi|21228733|ref|NP_634655.1| - 0.16 11.8 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 JAB-like toxin 1 Malic_M PF03949.10 gi|21228734|ref|NP_634656.1| - 1e-67 228.3 2.5 1.4e-67 227.9 1.7 1.2 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.14 gi|21228734|ref|NP_634656.1| - 5.3e-31 107.6 0.2 1.5e-28 99.6 0.1 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain ELFV_dehydrog PF00208.16 gi|21228734|ref|NP_634656.1| - 1.5e-05 24.6 0.8 0.00023 20.8 0.1 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.16 gi|21228734|ref|NP_634656.1| - 1.1 9.0 3.6 0.79 9.5 0.7 2.2 2 1 0 2 2 2 0 ThiF family Methyltransf_31 PF13847.1 gi|21228735|ref|NP_634657.1| - 6.6e-17 61.5 0.1 7.8e-17 61.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|21228735|ref|NP_634657.1| - 2.4e-16 59.9 0.0 3.7e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|21228735|ref|NP_634657.1| - 3e-16 59.6 0.0 5.7e-16 58.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|21228735|ref|NP_634657.1| - 4.1e-16 59.2 0.0 7e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21228735|ref|NP_634657.1| - 1.1e-15 58.1 0.0 1.8e-15 57.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21228735|ref|NP_634657.1| - 1.8e-12 46.9 0.0 3.7e-12 45.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.13 gi|21228735|ref|NP_634657.1| - 7.9e-09 34.9 0.2 1.1e-08 34.5 0.1 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|21228735|ref|NP_634657.1| - 2.5e-08 33.8 0.0 4.9e-08 32.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|21228735|ref|NP_634657.1| - 7.4e-08 31.7 0.0 9.5e-08 31.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_PK PF05891.7 gi|21228735|ref|NP_634657.1| - 9.2e-07 28.3 0.0 4e-06 26.3 0.0 1.7 1 1 1 2 2 2 1 AdoMet dependent proline di-methyltransferase Methyltransf_26 PF13659.1 gi|21228735|ref|NP_634657.1| - 1.4e-06 28.3 0.0 2e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|21228735|ref|NP_634657.1| - 1.8e-06 27.1 0.0 2.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.6 gi|21228735|ref|NP_634657.1| - 2.1e-05 24.0 0.0 2.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_16 PF10294.4 gi|21228735|ref|NP_634657.1| - 0.00012 21.5 0.0 0.00034 20.0 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_2 PF00891.13 gi|21228735|ref|NP_634657.1| - 0.00021 20.5 0.0 0.00027 20.1 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase GidB PF02527.10 gi|21228735|ref|NP_634657.1| - 0.00024 20.2 0.0 0.00034 19.8 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G TehB PF03848.9 gi|21228735|ref|NP_634657.1| - 0.00037 19.7 0.1 0.00044 19.4 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.8 gi|21228735|ref|NP_634657.1| - 0.00073 18.7 0.0 0.001 18.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Rsm22 PF09243.5 gi|21228735|ref|NP_634657.1| - 0.0015 17.6 0.0 0.0019 17.2 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_5 PF01795.14 gi|21228735|ref|NP_634657.1| - 0.02 14.1 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family YceI PF04264.8 gi|21228735|ref|NP_634657.1| - 0.035 14.0 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 YceI-like domain DUF938 PF06080.7 gi|21228735|ref|NP_634657.1| - 0.048 13.2 0.0 0.17 11.4 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_32 PF13679.1 gi|21228735|ref|NP_634657.1| - 0.13 11.9 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain TPP_enzyme_C PF02775.16 gi|21228736|ref|NP_634658.1| - 4.6e-26 91.2 0.2 8.3e-26 90.3 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|21228736|ref|NP_634658.1| - 1.1e-17 64.3 0.0 1.8e-17 63.6 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|21228736|ref|NP_634658.1| - 8.7e-11 40.9 16.0 3.3e-07 29.6 2.1 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21228736|ref|NP_634658.1| - 4e-08 32.7 11.9 0.00016 21.4 1.4 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21228736|ref|NP_634658.1| - 4.5e-08 32.7 7.6 1.3e-07 31.2 5.3 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21228736|ref|NP_634658.1| - 5.8e-07 29.2 13.7 1.6e-05 24.6 8.3 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21228736|ref|NP_634658.1| - 7.4e-07 28.7 17.5 7e-05 22.5 1.1 3.2 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21228736|ref|NP_634658.1| - 1.6e-05 25.0 8.2 1.6e-05 25.0 5.7 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21228736|ref|NP_634658.1| - 3.1e-05 24.2 10.7 3.1e-05 24.2 7.4 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain TPP_enzyme_N PF02776.13 gi|21228736|ref|NP_634658.1| - 5e-05 22.8 1.3 0.0012 18.3 0.2 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_8 PF13183.1 gi|21228736|ref|NP_634658.1| - 0.001 19.0 10.7 0.004 17.1 7.1 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21228736|ref|NP_634658.1| - 0.0029 18.3 8.8 0.0077 16.9 1.4 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|21228736|ref|NP_634658.1| - 0.013 16.0 13.0 0.37 11.3 0.9 3.2 2 1 1 3 3 2 0 4Fe-4S single cluster domain Transket_pyr PF02779.19 gi|21228736|ref|NP_634658.1| - 0.024 14.1 0.2 0.082 12.3 0.1 2.0 2 1 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_4 PF12800.2 gi|21228736|ref|NP_634658.1| - 0.028 14.7 18.6 0.055 13.8 2.9 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|21228736|ref|NP_634658.1| - 0.045 14.1 11.3 1.3 9.4 0.7 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain AAA_19 PF13245.1 gi|21228736|ref|NP_634658.1| - 0.051 13.3 0.4 0.45 10.2 0.2 2.3 2 0 0 2 2 2 0 Part of AAA domain Fer4_18 PF13746.1 gi|21228736|ref|NP_634658.1| - 0.11 12.9 10.6 0.16 12.4 1.3 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|21228736|ref|NP_634658.1| - 0.2 11.5 4.0 0.83 9.5 2.8 2.1 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_3 PF12798.2 gi|21228736|ref|NP_634658.1| - 0.36 11.5 23.3 0.064 13.8 4.5 3.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21228736|ref|NP_634658.1| - 0.74 10.2 16.5 0.073 13.4 1.3 2.9 2 1 3 5 5 4 0 4Fe-4S dicluster domain POR PF01558.13 gi|21228737|ref|NP_634659.1| - 1.8e-40 138.6 0.0 2.3e-40 138.3 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding_C_2 PF14535.1 gi|21228738|ref|NP_634660.1| - 1.8e-25 88.8 0.3 9.5e-25 86.4 0.0 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|21228738|ref|NP_634660.1| - 3e-14 52.2 0.0 4.4e-14 51.6 0.0 1.3 1 1 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.8 gi|21228738|ref|NP_634660.1| - 0.013 14.0 0.0 0.11 10.9 0.0 2.2 3 0 0 3 3 3 0 GH3 auxin-responsive promoter MS_channel PF00924.13 gi|21228739|ref|NP_634661.1| - 7.3e-44 149.5 0.5 1.1e-43 149.0 0.3 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel RhodobacterPufX PF11511.3 gi|21228739|ref|NP_634661.1| - 0.17 11.2 4.3 2.7 7.4 0.2 2.6 1 1 1 2 2 2 0 Intrinsic membrane protein PufX MerC PF03203.9 gi|21228739|ref|NP_634661.1| - 0.54 10.6 7.3 17 5.8 0.0 2.2 1 1 1 2 2 2 0 MerC mercury resistance protein Fasciclin PF02469.17 gi|21228740|ref|NP_634662.1| - 1.6e-66 222.1 3.7 6.7e-36 123.1 0.1 2.6 2 0 0 2 2 2 2 Fasciclin domain DUF4430 PF14478.1 gi|21228740|ref|NP_634662.1| - 9.9e-15 54.3 4.9 1.8e-07 31.1 0.2 2.9 2 0 0 2 2 2 2 Domain of unknown function (DUF4430) TM_helix PF05552.7 gi|21228741|ref|NP_634663.1| - 2.7e-32 110.2 36.4 3.6e-12 45.7 2.3 5.1 5 0 0 5 5 5 4 Conserved TM helix CorA PF01544.13 gi|21228742|ref|NP_634664.1| - 2.5e-80 269.6 4.6 3.1e-80 269.3 3.2 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein T2SF PF00482.18 gi|21228742|ref|NP_634664.1| - 0.017 15.0 2.8 0.02 14.7 0.1 2.3 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F DUF432 PF04254.8 gi|21228743|ref|NP_634665.1| - 2.8e-42 143.5 0.0 4.1e-42 142.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.13 gi|21228744|ref|NP_634666.1| - 2.3e-55 187.1 0.7 2.3e-55 187.1 0.5 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel Isochorismatase PF00857.15 gi|21228745|ref|NP_634667.1| - 3.4e-17 62.9 0.0 5.8e-12 45.8 0.0 3.0 2 1 1 3 3 3 3 Isochorismatase family ThiS PF02597.15 gi|21228746|ref|NP_634668.1| - 6.9e-22 77.6 0.0 7.8e-22 77.5 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.6 gi|21228746|ref|NP_634668.1| - 0.013 15.6 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) AFOR_C PF01314.13 gi|21228747|ref|NP_634669.1| - 9e-145 482.1 0.0 1.1e-144 481.8 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|21228747|ref|NP_634669.1| - 1.6e-79 265.9 0.0 2.6e-79 265.2 0.0 1.3 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain PocR PF10114.4 gi|21228748|ref|NP_634670.1| - 1e-62 210.3 0.4 3.4e-62 208.6 0.0 2.0 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|21228748|ref|NP_634670.1| - 3.2e-40 136.7 1.2 1.8e-18 66.8 0.0 4.4 4 0 0 4 4 4 3 PAS domain HisKA_2 PF07568.7 gi|21228748|ref|NP_634670.1| - 3.1e-30 103.8 2.1 5.6e-30 103.0 0.5 2.3 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.19 gi|21228748|ref|NP_634670.1| - 4.6e-30 103.7 0.0 9.5e-14 51.1 0.0 3.7 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|21228748|ref|NP_634670.1| - 2.6e-28 97.9 1.2 1.4e-12 47.5 0.1 4.2 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|21228748|ref|NP_634670.1| - 2.3e-27 95.1 0.0 1.9e-09 37.4 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|21228748|ref|NP_634670.1| - 7.4e-15 54.1 0.0 8.2e-07 28.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|21228748|ref|NP_634670.1| - 3.7e-11 42.7 0.3 1.7e-10 40.6 0.2 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|21228748|ref|NP_634670.1| - 6e-06 26.4 0.0 0.00063 19.9 0.0 2.9 2 0 0 2 2 2 1 PAS domain PAS_7 PF12860.2 gi|21228748|ref|NP_634670.1| - 8e-05 22.6 0.3 0.048 13.6 0.0 4.0 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.1 gi|21228748|ref|NP_634670.1| - 0.0001 22.1 0.0 0.00021 21.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21228748|ref|NP_634670.1| - 0.0019 18.5 0.4 0.0066 16.8 0.0 2.1 2 0 0 2 2 2 1 HWE histidine kinase PAS_11 PF14598.1 gi|21228748|ref|NP_634670.1| - 0.0027 17.6 0.1 0.21 11.5 0.0 3.1 2 1 0 3 3 3 1 PAS domain OEP PF02321.13 gi|21228748|ref|NP_634670.1| - 0.51 9.8 7.0 0.13 11.8 1.6 2.4 3 0 0 3 3 3 0 Outer membrane efflux protein MULE PF10551.4 gi|21228749|ref|NP_634671.1| - 3.4e-11 43.1 0.0 8.4e-11 41.8 0.0 1.7 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.9 gi|21228749|ref|NP_634671.1| - 6.5e-05 22.2 1.0 0.00046 19.4 0.7 1.9 1 1 0 1 1 1 1 Transposase IS66 family PRK PF00485.13 gi|21228749|ref|NP_634671.1| - 0.028 13.9 1.3 0.051 13.1 0.3 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Sgf11 PF08209.6 gi|21228749|ref|NP_634671.1| - 0.21 10.9 3.7 4.3 6.7 0.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) ApbE PF02424.10 gi|21228750|ref|NP_634672.1| - 4.2e-23 81.9 5.3 6.6e-22 78.0 3.7 2.0 1 1 0 1 1 1 1 ApbE family XdhC_CoxI PF02625.11 gi|21228750|ref|NP_634672.1| - 1.5 8.4 4.0 6.5 6.4 0.2 2.6 3 0 0 3 3 3 0 XdhC and CoxI family Aminotran_1_2 PF00155.16 gi|21228751|ref|NP_634673.1| - 7.6e-59 199.4 0.0 8.7e-59 199.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|21228751|ref|NP_634673.1| - 0.00049 18.4 0.0 0.00068 18.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Abhydrolase_6 PF12697.2 gi|21228752|ref|NP_634674.1| - 5.6e-42 144.1 0.2 6.4e-42 143.9 0.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|21228752|ref|NP_634674.1| - 9.8e-20 70.7 0.0 1e-18 67.4 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|21228752|ref|NP_634674.1| - 1e-19 71.0 0.0 2.1e-18 66.7 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.5 gi|21228752|ref|NP_634674.1| - 5e-05 23.1 0.0 8.6e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein SCFA_trans PF02667.9 gi|21228752|ref|NP_634674.1| - 0.03 13.1 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Short chain fatty acid transporter Hydrolase_4 PF12146.3 gi|21228752|ref|NP_634674.1| - 0.046 13.5 0.0 0.098 12.5 0.0 1.6 1 0 0 1 1 1 0 Putative lysophospholipase Transposase_28 PF04195.7 gi|21228752|ref|NP_634674.1| - 0.084 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative gypsy type transposon FSH1 PF03959.8 gi|21228752|ref|NP_634674.1| - 0.17 11.3 0.0 3.2 7.1 0.0 2.3 2 1 0 3 3 3 0 Serine hydrolase (FSH1) DUF4605 PF15378.1 gi|21228753|ref|NP_634675.1| - 0.85 9.3 3.2 0.55 9.9 0.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4605) DUF2124 PF09897.4 gi|21228754|ref|NP_634676.1| - 1.6e-52 177.1 0.1 1.8e-52 176.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) MCH PF02289.11 gi|21228755|ref|NP_634677.1| - 6e-158 524.8 0.6 6.7e-158 524.6 0.4 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Peptidase_U32 PF01136.14 gi|21228756|ref|NP_634678.1| - 2.3e-80 268.8 0.1 3.1e-80 268.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.20 gi|21228756|ref|NP_634678.1| - 0.011 15.8 0.2 0.22 11.6 0.1 2.5 1 1 1 2 2 2 0 Elongation factor Tu domain 2 Acyl_transf_3 PF01757.17 gi|21228757|ref|NP_634679.1| - 7.7e-16 57.8 47.8 1.4e-15 57.0 33.1 1.4 1 1 0 1 1 1 1 Acyltransferase family OpgC_C PF10129.4 gi|21228757|ref|NP_634679.1| - 0.00012 20.9 31.8 0.00034 19.3 22.1 1.8 1 1 0 1 1 1 1 OpgC protein FKBP_C PF00254.23 gi|21228758|ref|NP_634680.1| - 2.4e-15 56.3 0.2 4.5e-13 49.0 0.0 2.3 2 0 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase NikR_C PF08753.6 gi|21228759|ref|NP_634681.1| - 4.4e-30 103.4 0.8 6e-30 102.9 0.6 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|21228759|ref|NP_634681.1| - 0.00016 21.4 0.0 0.00033 20.4 0.0 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family Bromo_TP PF07524.8 gi|21228759|ref|NP_634681.1| - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Bromodomain associated Acetyltransf_1 PF00583.19 gi|21228760|ref|NP_634682.1| - 1.8e-16 59.9 0.0 2.8e-16 59.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21228760|ref|NP_634682.1| - 5e-12 45.8 0.1 7.4e-12 45.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21228760|ref|NP_634682.1| - 4.9e-11 42.8 0.4 6.2e-11 42.4 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21228760|ref|NP_634682.1| - 1.2e-10 40.9 0.0 2e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.1 gi|21228760|ref|NP_634682.1| - 4.9e-10 39.5 0.0 6.5e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21228760|ref|NP_634682.1| - 9.4e-09 35.3 0.0 1.3e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21228760|ref|NP_634682.1| - 6.8e-08 32.4 0.0 8.9e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21228760|ref|NP_634682.1| - 9e-07 29.1 0.0 1.1e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21228760|ref|NP_634682.1| - 0.005 16.7 0.0 0.008 16.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF3749 PF12568.3 gi|21228760|ref|NP_634682.1| - 0.059 12.9 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21228761|ref|NP_634683.1| - 4.1e-18 65.1 0.0 6e-18 64.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21228761|ref|NP_634683.1| - 8.4e-14 51.4 0.2 1.3e-13 50.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|21228761|ref|NP_634683.1| - 6e-13 49.0 0.3 7.4e-13 48.7 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21228761|ref|NP_634683.1| - 5.4e-11 42.0 0.0 8.1e-11 41.5 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.1 gi|21228761|ref|NP_634683.1| - 9.7e-10 38.3 0.0 1.3e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21228761|ref|NP_634683.1| - 3.3e-09 36.8 0.0 4.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21228761|ref|NP_634683.1| - 1.9e-08 34.3 0.0 2.6e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|21228761|ref|NP_634683.1| - 1.1e-07 32.1 0.0 1.2e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21228761|ref|NP_634683.1| - 0.0018 18.0 0.0 0.0041 16.9 0.0 1.6 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase DUF3804 PF12707.2 gi|21228761|ref|NP_634683.1| - 0.11 12.0 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) Na_Ca_ex PF01699.19 gi|21228762|ref|NP_634684.1| - 6.4e-51 171.6 37.1 3.1e-26 91.6 9.9 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein ACT_7 PF13840.1 gi|21228763|ref|NP_634685.1| - 1.7e-24 85.1 0.0 2.5e-24 84.5 0.0 1.3 1 0 0 1 1 1 1 ACT domain ACT PF01842.20 gi|21228763|ref|NP_634685.1| - 0.00012 21.4 0.4 0.00034 20.0 0.0 1.8 2 0 0 2 2 2 1 ACT domain Na_Ala_symp PF01235.12 gi|21228764|ref|NP_634686.1| - 3.6e-145 483.6 23.7 4e-145 483.5 16.5 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family GT36_AF PF06205.6 gi|21228764|ref|NP_634686.1| - 0.078 12.7 0.3 2.4 7.9 0.1 2.3 2 0 0 2 2 2 0 Glycosyltransferase 36 associated family CARDB PF07705.6 gi|21228765|ref|NP_634687.1| - 4.4e-16 58.7 0.0 7.2e-05 22.7 0.0 3.5 2 1 2 4 4 4 3 CARDB DUF2393 PF09624.5 gi|21228765|ref|NP_634687.1| - 0.0001 21.8 0.3 0.077 12.5 0.0 3.2 3 1 0 3 3 3 2 Protein of unknown function (DUF2393) DUF11 PF01345.13 gi|21228765|ref|NP_634687.1| - 0.00061 19.7 0.0 3.9 7.5 0.0 3.4 3 0 0 3 3 3 2 Domain of unknown function DUF11 TRAP_beta PF05753.9 gi|21228765|ref|NP_634687.1| - 0.0013 17.9 0.0 0.97 8.5 0.0 3.2 3 0 0 3 3 3 2 Translocon-associated protein beta (TRAPB) Gryzun PF07919.7 gi|21228765|ref|NP_634687.1| - 0.0027 16.1 0.0 0.91 7.7 0.0 2.1 1 1 0 2 2 2 2 Gryzun, putative trafficking through Golgi NPCBM_assoc PF10633.4 gi|21228765|ref|NP_634687.1| - 0.0047 16.9 0.0 4 7.5 0.0 3.7 5 0 0 5 5 5 1 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4352 PF11611.3 gi|21228765|ref|NP_634687.1| - 0.012 15.7 0.1 0.073 13.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4352) MacB_PCD PF12704.2 gi|21228766|ref|NP_634688.1| - 2.8e-16 59.8 1.6 2.8e-16 59.8 1.1 2.0 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21228766|ref|NP_634688.1| - 8.5e-12 44.9 8.5 8.5e-12 44.9 5.9 2.1 2 0 0 2 2 2 1 FtsX-like permease family ABC_tran PF00005.22 gi|21228767|ref|NP_634689.1| - 8.5e-33 113.5 0.1 1.8e-32 112.5 0.0 1.6 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.1 gi|21228767|ref|NP_634689.1| - 3.6e-11 43.5 0.0 7.2e-09 36.0 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|21228767|ref|NP_634689.1| - 2.9e-08 34.0 0.3 0.00036 20.8 0.0 2.8 3 0 0 3 3 3 2 AAA domain SMC_N PF02463.14 gi|21228767|ref|NP_634689.1| - 1.4e-07 31.0 0.1 8.1e-07 28.4 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|21228767|ref|NP_634689.1| - 1.2e-05 25.4 0.5 0.00012 22.2 0.3 2.3 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|21228767|ref|NP_634689.1| - 1.3e-05 24.4 0.3 0.13 11.3 0.0 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|21228767|ref|NP_634689.1| - 0.0001 21.7 0.1 0.00036 20.0 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|21228767|ref|NP_634689.1| - 0.00013 21.3 0.1 0.0043 16.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|21228767|ref|NP_634689.1| - 0.00014 21.9 0.1 0.00034 20.6 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.1 gi|21228767|ref|NP_634689.1| - 0.00023 21.9 0.2 0.00073 20.3 0.1 2.2 2 1 0 2 2 1 1 AAA domain DUF258 PF03193.11 gi|21228767|ref|NP_634689.1| - 0.00057 19.0 0.1 0.0012 18.1 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_28 PF13521.1 gi|21228767|ref|NP_634689.1| - 0.00071 19.5 0.0 0.0019 18.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.17 gi|21228767|ref|NP_634689.1| - 0.00073 19.0 0.0 0.016 14.6 0.0 2.3 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain SbcCD_C PF13558.1 gi|21228767|ref|NP_634689.1| - 0.0015 18.3 0.1 0.012 15.4 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.1 gi|21228767|ref|NP_634689.1| - 0.0017 18.2 0.1 0.0064 16.3 0.1 1.9 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|21228767|ref|NP_634689.1| - 0.0021 17.5 0.1 0.025 13.9 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein cobW PF02492.14 gi|21228767|ref|NP_634689.1| - 0.0026 17.2 0.0 0.0061 16.0 0.0 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.2 gi|21228767|ref|NP_634689.1| - 0.0029 17.0 0.1 0.016 14.6 0.0 1.9 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|21228767|ref|NP_634689.1| - 0.0037 17.1 0.1 0.011 15.6 0.0 1.9 2 1 0 2 2 1 1 AAA domain AAA_24 PF13479.1 gi|21228767|ref|NP_634689.1| - 0.0067 16.0 0.6 0.047 13.2 0.0 2.4 3 0 0 3 3 2 1 AAA domain MobB PF03205.9 gi|21228767|ref|NP_634689.1| - 0.0078 15.9 0.1 0.075 12.7 0.0 2.4 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B KaiC PF06745.8 gi|21228767|ref|NP_634689.1| - 0.0083 15.2 0.5 0.82 8.7 0.0 3.0 2 1 1 3 3 3 1 KaiC T2SE PF00437.15 gi|21228767|ref|NP_634689.1| - 0.0088 14.9 0.3 0.03 13.2 0.1 1.8 1 1 1 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.1 gi|21228767|ref|NP_634689.1| - 0.01 16.1 0.2 0.01 16.1 0.1 1.8 2 1 0 2 2 1 0 AAA domain Arch_ATPase PF01637.13 gi|21228767|ref|NP_634689.1| - 0.011 15.4 0.1 0.023 14.3 0.0 1.8 2 1 0 2 2 2 0 Archaeal ATPase MMR_HSR1 PF01926.18 gi|21228767|ref|NP_634689.1| - 0.015 15.2 0.1 0.04 13.8 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRPRB PF09439.5 gi|21228767|ref|NP_634689.1| - 0.016 14.4 0.0 0.029 13.5 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit NACHT PF05729.7 gi|21228767|ref|NP_634689.1| - 0.016 14.8 0.2 0.041 13.5 0.1 1.8 1 1 0 1 1 1 0 NACHT domain Miro PF08477.8 gi|21228767|ref|NP_634689.1| - 0.034 14.6 0.4 0.12 12.8 0.0 2.1 2 0 0 2 2 2 0 Miro-like protein AAA_30 PF13604.1 gi|21228767|ref|NP_634689.1| - 0.038 13.5 0.2 0.13 11.8 0.0 1.9 2 1 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.20 gi|21228767|ref|NP_634689.1| - 0.074 12.5 1.3 0.31 10.5 0.0 2.3 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain NB-ARC PF00931.17 gi|21228767|ref|NP_634689.1| - 0.075 11.8 0.1 0.17 10.7 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain G-alpha PF00503.15 gi|21228767|ref|NP_634689.1| - 0.081 11.6 0.0 0.093 11.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit RNA_helicase PF00910.17 gi|21228767|ref|NP_634689.1| - 0.14 12.2 0.2 0.68 10.1 0.1 2.3 2 1 0 2 2 2 0 RNA helicase AAA PF00004.24 gi|21228767|ref|NP_634689.1| - 0.85 9.8 6.2 6.5 6.9 0.1 3.4 2 1 2 4 4 3 0 ATPase family associated with various cellular activities (AAA) PepSY_2 PF13670.1 gi|21228768|ref|NP_634690.1| - 0.15 11.9 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain AAA_3 PF07726.6 gi|21228769|ref|NP_634691.1| - 1.1e-63 212.6 0.2 1.7e-63 212.0 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|21228769|ref|NP_634691.1| - 2e-10 40.5 0.0 3.7e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.18 gi|21228769|ref|NP_634691.1| - 6.1e-09 35.1 0.4 5.3e-08 32.0 0.3 2.1 1 1 0 1 1 1 1 MCM2/3/5 family AAA PF00004.24 gi|21228769|ref|NP_634691.1| - 1.7e-06 28.2 0.0 4.2e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|21228769|ref|NP_634691.1| - 4.3e-06 25.9 0.7 8.6e-05 21.6 0.5 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Mg_chelatase PF01078.16 gi|21228769|ref|NP_634691.1| - 9e-05 21.7 0.3 0.0072 15.5 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.21 gi|21228769|ref|NP_634691.1| - 0.00044 19.7 0.1 0.0091 15.4 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.9 gi|21228769|ref|NP_634691.1| - 0.073 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF58 PF01882.13 gi|21228770|ref|NP_634692.1| - 8e-20 70.7 0.0 1.3e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_CoxE PF05762.9 gi|21228770|ref|NP_634692.1| - 3.3e-06 26.3 0.0 5.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.1 gi|21228770|ref|NP_634692.1| - 7.3e-05 22.9 0.0 0.0001 22.4 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_22 PF13401.1 gi|21228770|ref|NP_634692.1| - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain BatA PF07584.6 gi|21228771|ref|NP_634693.1| - 6.9e-13 48.5 2.9 6.9e-13 48.5 2.0 2.0 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal Glyco_hydro_42M PF08532.5 gi|21228771|ref|NP_634693.1| - 0.047 12.8 0.0 0.095 11.8 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain VWA_2 PF13519.1 gi|21228771|ref|NP_634693.1| - 0.053 13.6 0.6 0.53 10.3 0.4 2.6 1 1 0 1 1 1 0 von Willebrand factor type A domain VWA_2 PF13519.1 gi|21228772|ref|NP_634694.1| - 1.5e-12 47.9 0.1 8.4e-10 39.0 0.0 2.6 2 0 0 2 2 2 2 von Willebrand factor type A domain DUF1355 PF07090.6 gi|21228772|ref|NP_634694.1| - 6.2e-09 35.4 0.0 1.3e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1355) VWA PF00092.23 gi|21228772|ref|NP_634694.1| - 1.4e-05 24.8 0.3 0.0017 18.0 0.1 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain ThuA PF06283.6 gi|21228772|ref|NP_634694.1| - 0.014 15.1 0.0 0.08 12.6 0.0 2.2 2 1 0 2 2 2 0 Trehalose utilisation DUF1109 PF06532.6 gi|21228772|ref|NP_634694.1| - 0.062 12.7 0.1 0.11 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1109) DUF1194 PF06707.6 gi|21228772|ref|NP_634694.1| - 0.12 11.3 0.1 0.85 8.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1194) UPF0118 PF01594.11 gi|21228773|ref|NP_634695.1| - 3.8e-46 157.5 40.2 4.5e-46 157.3 27.8 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 DUF4177 PF13783.1 gi|21228774|ref|NP_634696.1| - 1.8e-05 24.3 0.1 2.5e-05 23.7 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4177) HEAT_2 PF13646.1 gi|21228776|ref|NP_634698.1| - 9.3e-38 128.4 10.3 4.9e-07 29.9 0.1 7.4 5 2 1 7 7 7 6 HEAT repeats HEAT PF02985.17 gi|21228776|ref|NP_634698.1| - 3.7e-19 67.0 12.5 0.06 13.4 0.0 12.1 13 0 0 13 13 13 4 HEAT repeat HEAT_EZ PF13513.1 gi|21228776|ref|NP_634698.1| - 4.9e-14 52.3 18.6 0.066 13.7 0.4 9.7 7 4 4 11 11 10 5 HEAT-like repeat Adaptin_N PF01602.15 gi|21228776|ref|NP_634698.1| - 4.6e-10 38.4 0.8 0.00098 17.5 0.1 5.3 3 2 1 4 4 4 3 Adaptin N terminal region Vac14_Fab1_bd PF12755.2 gi|21228776|ref|NP_634698.1| - 5.2e-08 33.1 0.0 0.036 14.4 0.0 5.3 4 1 1 5 5 5 1 Vacuolar 14 Fab1-binding region CLASP_N PF12348.3 gi|21228776|ref|NP_634698.1| - 1.2e-05 24.7 0.0 0.38 10.0 0.0 4.7 4 1 1 5 5 5 1 CLASP N terminal Cnd1 PF12717.2 gi|21228776|ref|NP_634698.1| - 2.8e-05 24.0 0.1 0.91 9.3 0.0 5.0 4 1 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Arm PF00514.18 gi|21228776|ref|NP_634698.1| - 0.00012 21.7 2.7 47 4.0 0.0 7.7 9 0 0 9 9 8 0 Armadillo/beta-catenin-like repeat TFCD_C PF12612.3 gi|21228776|ref|NP_634698.1| - 0.0004 19.8 0.8 0.022 14.2 0.0 3.6 3 1 2 5 5 5 1 Tubulin folding cofactor D C terminal ParD PF09386.5 gi|21228776|ref|NP_634698.1| - 0.00066 19.7 2.9 2 8.6 0.0 5.9 5 3 2 8 8 7 1 Antitoxin ParD DUF1546 PF07571.8 gi|21228776|ref|NP_634698.1| - 0.0033 17.4 1.3 8.3 6.6 0.0 5.0 3 2 1 5 5 5 1 Protein of unknown function (DUF1546) DUF708 PF05341.6 gi|21228776|ref|NP_634698.1| - 0.0071 16.1 4.4 1.8 8.3 0.0 5.3 6 1 1 7 7 7 1 Protein of unknown function (DUF708) API5 PF05918.6 gi|21228776|ref|NP_634698.1| - 0.0086 14.6 0.5 1.4 7.3 0.0 2.8 3 0 0 3 3 3 1 Apoptosis inhibitory protein 5 (API5) Nipped-B_C PF12830.2 gi|21228776|ref|NP_634698.1| - 0.011 15.3 0.0 8.4 5.9 0.0 5.3 8 0 0 8 8 8 0 Sister chromatid cohesion C-terminus Serpin PF00079.15 gi|21228777|ref|NP_634699.1| - 5.7e-118 394.2 3.5 6.6e-118 394.0 2.4 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) DUF3469 PF11952.3 gi|21228778|ref|NP_634700.1| - 0.0037 16.9 0.5 2.7 7.7 0.1 3.9 3 1 0 3 3 3 1 Protein of unknown function (DUF3469) ERAP1_C PF11838.3 gi|21228778|ref|NP_634700.1| - 0.028 13.6 1.0 4.9 6.2 0.2 2.6 3 0 0 3 3 3 0 ERAP1-like C-terminal domain DnaB_bind PF10410.4 gi|21228778|ref|NP_634700.1| - 3.4 7.7 5.9 17 5.4 0.2 3.6 3 0 0 3 3 3 0 DnaB-helicase binding domain of primase CsbD PF05532.7 gi|21228779|ref|NP_634701.1| - 1.6e-15 56.5 13.2 1.9e-15 56.2 9.1 1.1 1 0 0 1 1 1 1 CsbD-like ISG65-75 PF11727.3 gi|21228779|ref|NP_634701.1| - 0.4 9.6 7.7 0.4 9.6 5.3 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein DUF488 PF04343.8 gi|21228781|ref|NP_634703.1| - 5.1e-27 94.6 0.0 8e-27 94.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF488 HTH_45 PF14947.1 gi|21228781|ref|NP_634703.1| - 0.00039 20.1 0.1 0.0012 18.5 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix HemN_C PF06969.11 gi|21228781|ref|NP_634703.1| - 0.025 14.6 0.0 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 HemN C-terminal domain HTH_27 PF13463.1 gi|21228781|ref|NP_634703.1| - 0.053 13.8 0.0 9.9 6.5 0.0 2.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mrr_N PF14338.1 gi|21228781|ref|NP_634703.1| - 0.069 13.2 0.1 0.19 11.8 0.1 1.7 1 0 0 1 1 1 0 Mrr N-terminal domain DUF4065 PF13274.1 gi|21228781|ref|NP_634703.1| - 0.87 10.3 6.4 0.15 12.7 0.8 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4065) Plasmid_stabil PF05016.9 gi|21228782|ref|NP_634704.1| - 1.4e-05 25.3 0.8 1.6e-05 25.1 0.6 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Transpep_BrtH PF14399.1 gi|21228782|ref|NP_634704.1| - 0.029 13.6 0.4 0.037 13.3 0.3 1.2 1 0 0 1 1 1 0 NlpC/p60-like transpeptidase DUF2683 PF10884.3 gi|21228783|ref|NP_634705.1| - 5.1e-36 122.4 1.1 6.2e-36 122.1 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) HTH_7 PF02796.10 gi|21228784|ref|NP_634706.1| - 1.8e-08 34.0 1.2 3e-07 30.1 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase rve PF00665.21 gi|21228784|ref|NP_634706.1| - 6.7e-07 29.4 0.0 1.2e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain HTH_38 PF13936.1 gi|21228784|ref|NP_634706.1| - 2.7e-06 26.8 0.5 5.2e-06 25.9 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|21228784|ref|NP_634706.1| - 5.3e-05 22.7 0.1 0.00011 21.7 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_IclR PF09339.5 gi|21228784|ref|NP_634706.1| - 0.015 14.9 0.0 0.029 13.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Terminase_5 PF06056.7 gi|21228784|ref|NP_634706.1| - 0.017 14.6 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_29 PF13551.1 gi|21228784|ref|NP_634706.1| - 0.049 13.7 0.0 0.094 12.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_3 PF01381.17 gi|21228784|ref|NP_634706.1| - 0.062 13.1 0.1 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix HTH_36 PF13730.1 gi|21228784|ref|NP_634706.1| - 0.078 13.1 0.1 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain GcrA PF07750.6 gi|21228784|ref|NP_634706.1| - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 GcrA cell cycle regulator RVT_1 PF00078.22 gi|21228785|ref|NP_634707.1| - 4.9e-41 140.4 0.0 1.3e-40 139.0 0.0 1.8 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.1 gi|21228785|ref|NP_634707.1| - 4.4e-29 100.3 2.4 1.2e-28 98.9 1.6 1.8 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase GIIM PF08388.6 gi|21228785|ref|NP_634707.1| - 8.2e-26 89.6 5.1 2.5e-25 88.0 3.6 1.9 1 0 0 1 1 1 1 Group II intron, maturase-specific domain FliD_N PF02465.13 gi|21228785|ref|NP_634707.1| - 0.12 12.7 0.3 0.25 11.7 0.2 1.5 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus TFIID-18kDa PF02269.11 gi|21228786|ref|NP_634708.1| - 0.062 13.1 0.2 0.075 12.8 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit IstB_IS21 PF01695.12 gi|21228787|ref|NP_634709.1| - 1.8e-67 226.1 0.0 2.1e-67 225.9 0.0 1.0 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.24 gi|21228787|ref|NP_634709.1| - 1.9e-05 24.9 0.0 2.8e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.11 gi|21228787|ref|NP_634709.1| - 4.8e-05 22.6 0.0 6.5e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein Bac_DnaA PF00308.13 gi|21228787|ref|NP_634709.1| - 0.00014 21.5 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial dnaA protein RuvB_N PF05496.7 gi|21228787|ref|NP_634709.1| - 0.00021 20.3 0.0 0.00029 19.9 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_14 PF13173.1 gi|21228787|ref|NP_634709.1| - 0.00029 20.7 0.0 0.00042 20.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|21228787|ref|NP_634709.1| - 0.00034 20.6 0.0 0.00056 19.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|21228787|ref|NP_634709.1| - 0.00064 19.8 0.1 0.079 13.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21228787|ref|NP_634709.1| - 0.00076 20.2 0.3 0.0014 19.4 0.2 1.7 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21228787|ref|NP_634709.1| - 0.0036 17.0 0.4 0.0071 16.0 0.0 1.6 2 0 0 2 2 1 1 Part of AAA domain AAA_25 PF13481.1 gi|21228787|ref|NP_634709.1| - 0.005 16.2 0.0 0.0062 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|21228787|ref|NP_634709.1| - 0.0064 15.6 0.0 0.0085 15.2 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function, DUF258 ArgK PF03308.11 gi|21228787|ref|NP_634709.1| - 0.01 14.6 0.1 0.028 13.1 0.0 1.7 2 0 0 2 2 2 0 ArgK protein AAA_5 PF07728.9 gi|21228787|ref|NP_634709.1| - 0.011 15.4 0.2 0.034 13.8 0.2 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.1 gi|21228787|ref|NP_634709.1| - 0.014 15.0 0.0 0.029 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain KTI12 PF08433.5 gi|21228787|ref|NP_634709.1| - 0.019 14.1 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_10 PF12846.2 gi|21228787|ref|NP_634709.1| - 0.024 14.0 0.1 0.11 11.9 0.1 1.8 1 1 1 2 2 2 0 AAA-like domain DUF815 PF05673.8 gi|21228787|ref|NP_634709.1| - 0.025 13.4 0.0 0.033 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_16 PF13191.1 gi|21228787|ref|NP_634709.1| - 0.026 14.5 0.0 0.049 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.1 gi|21228787|ref|NP_634709.1| - 0.03 14.6 0.3 0.071 13.4 0.2 1.8 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|21228787|ref|NP_634709.1| - 0.045 13.7 0.0 0.057 13.3 0.0 1.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase RmuC PF02646.11 gi|21228787|ref|NP_634709.1| - 0.057 12.2 0.0 0.1 11.3 0.0 1.4 1 0 0 1 1 1 0 RmuC family NTPase_1 PF03266.10 gi|21228787|ref|NP_634709.1| - 0.058 13.1 0.3 8.9 5.9 0.0 2.3 1 1 1 2 2 2 0 NTPase DUF2240 PF09999.4 gi|21228787|ref|NP_634709.1| - 0.065 12.6 0.0 0.19 11.1 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2240) AAA_33 PF13671.1 gi|21228787|ref|NP_634709.1| - 0.1 12.4 0.0 0.14 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|21228787|ref|NP_634709.1| - 0.12 11.5 0.0 0.23 10.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|21228787|ref|NP_634709.1| - 0.12 12.5 0.0 0.21 11.7 0.0 1.6 1 1 0 1 1 1 0 RNA helicase AAA_29 PF13555.1 gi|21228787|ref|NP_634709.1| - 0.14 11.7 0.0 0.33 10.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|21228787|ref|NP_634709.1| - 0.14 12.4 0.0 0.4 10.9 0.0 1.6 1 1 0 1 1 1 0 ABC transporter PHAT PF09246.5 gi|21228789|ref|NP_634711.1| - 0.12 12.0 1.5 0.22 11.1 0.3 2.0 2 1 0 2 2 2 0 PHAT Radical_SAM PF04055.16 gi|21228790|ref|NP_634712.1| - 1.3e-13 51.4 0.1 5.9e-13 49.3 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.14 gi|21228790|ref|NP_634712.1| - 3.3e-06 26.9 0.0 5.2e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 B12 binding domain DnaB_C PF03796.10 gi|21228791|ref|NP_634713.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21228791|ref|NP_634713.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21228791|ref|NP_634713.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21228791|ref|NP_634713.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DDE_Tnp_IS66 PF03050.9 gi|21228792|ref|NP_634714.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21228792|ref|NP_634714.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21228792|ref|NP_634714.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21228792|ref|NP_634714.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21228792|ref|NP_634714.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21228792|ref|NP_634714.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain Pyridox_oxidase PF01243.15 gi|21228793|ref|NP_634715.1| - 1.1e-14 54.1 0.0 1.5e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1428 PF07237.6 gi|21228793|ref|NP_634715.1| - 0.081 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) NAD_binding_8 PF13450.1 gi|21228794|ref|NP_634716.1| - 1.4e-14 53.8 0.0 2.9e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|21228794|ref|NP_634716.1| - 2.8e-09 36.3 0.0 2.7e-06 26.5 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Amino_oxidase PF01593.19 gi|21228794|ref|NP_634716.1| - 2.7e-08 33.3 0.0 2.2e-07 30.3 0.0 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase HI0933_like PF03486.9 gi|21228794|ref|NP_634716.1| - 7.8e-07 27.8 0.0 2e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.19 gi|21228794|ref|NP_634716.1| - 9.8e-06 24.6 0.0 4.1e-05 22.5 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.14 gi|21228794|ref|NP_634716.1| - 3e-05 23.2 0.0 4.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.22 gi|21228794|ref|NP_634716.1| - 0.00016 21.9 0.9 0.0075 16.6 0.0 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|21228794|ref|NP_634716.1| - 0.00022 20.4 0.0 0.00063 18.9 0.0 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.12 gi|21228794|ref|NP_634716.1| - 0.0015 17.6 0.0 0.006 15.7 0.0 1.9 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.17 gi|21228794|ref|NP_634716.1| - 0.0018 17.2 0.1 0.022 13.6 0.0 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A GDI PF00996.13 gi|21228794|ref|NP_634716.1| - 0.0033 15.8 0.3 0.0052 15.1 0.2 1.3 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox_3 PF13738.1 gi|21228794|ref|NP_634716.1| - 0.014 15.4 0.1 0.063 13.3 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21228794|ref|NP_634716.1| - 0.053 12.4 0.0 0.076 11.9 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox_2 PF07992.9 gi|21228794|ref|NP_634716.1| - 0.08 12.8 0.0 0.2 11.5 0.0 1.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.9 gi|21228794|ref|NP_634716.1| - 0.14 10.7 0.0 0.22 10.1 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Radical_SAM PF04055.16 gi|21228795|ref|NP_634717.1| - 1.6e-05 25.1 0.1 3.9e-05 23.9 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily HTH_38 PF13936.1 gi|21228796|ref|NP_634718.1| - 2.8e-07 29.9 0.3 6.5e-07 28.8 0.0 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain rve PF00665.21 gi|21228796|ref|NP_634718.1| - 6e-07 29.6 0.0 1.2e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain HTH_7 PF02796.10 gi|21228796|ref|NP_634718.1| - 2.8e-06 27.0 0.2 2.5e-05 24.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_23 PF13384.1 gi|21228796|ref|NP_634718.1| - 5.6e-05 22.6 0.0 0.00012 21.5 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain MerR PF00376.18 gi|21228796|ref|NP_634718.1| - 0.00029 20.3 0.1 0.00053 19.4 0.1 1.4 1 0 0 1 1 1 1 MerR family regulatory protein Sigma70_r4_2 PF08281.7 gi|21228796|ref|NP_634718.1| - 0.0016 17.8 0.0 0.0037 16.6 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_36 PF13730.1 gi|21228796|ref|NP_634718.1| - 0.0023 18.0 0.0 0.053 13.6 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.7 gi|21228796|ref|NP_634718.1| - 0.0023 17.4 0.0 0.0046 16.4 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) MerR_1 PF13411.1 gi|21228796|ref|NP_634718.1| - 0.0029 17.3 0.0 0.0057 16.4 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_29 PF13551.1 gi|21228796|ref|NP_634718.1| - 0.0034 17.5 0.0 0.0067 16.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix DUF2312 PF10073.4 gi|21228796|ref|NP_634718.1| - 0.0078 15.5 0.6 0.51 9.7 0.0 2.3 1 1 1 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2312) HTH_28 PF13518.1 gi|21228796|ref|NP_634718.1| - 0.016 15.1 0.0 0.045 13.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.1 gi|21228796|ref|NP_634718.1| - 0.017 15.3 0.0 0.045 13.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.11 gi|21228796|ref|NP_634718.1| - 0.018 14.3 0.0 0.041 13.1 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.17 gi|21228796|ref|NP_634718.1| - 0.02 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix GcrA PF07750.6 gi|21228796|ref|NP_634718.1| - 0.023 14.8 0.0 0.031 14.4 0.0 1.2 1 0 0 1 1 1 0 GcrA cell cycle regulator HTH_17 PF12728.2 gi|21228796|ref|NP_634718.1| - 0.035 14.3 0.0 0.097 12.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|21228796|ref|NP_634718.1| - 0.049 13.2 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 HTH domain UBA PF00627.26 gi|21228796|ref|NP_634718.1| - 0.11 12.4 0.0 2.8 7.9 0.0 2.5 2 0 0 2 2 2 0 UBA/TS-N domain HTH_24 PF13412.1 gi|21228796|ref|NP_634718.1| - 0.11 11.8 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RVT_N PF13655.1 gi|21228797|ref|NP_634719.1| - 4.5e-31 106.7 2.5 6.7e-31 106.2 1.7 1.3 1 0 0 1 1 1 1 N-terminal domain of reverse transcriptase RVT_1 PF00078.22 gi|21228797|ref|NP_634719.1| - 6.6e-13 48.5 0.0 1.3e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) FliD_N PF02465.13 gi|21228797|ref|NP_634719.1| - 0.067 13.5 0.7 0.12 12.7 0.5 1.5 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF829 PF05705.9 gi|21228797|ref|NP_634719.1| - 0.1 12.2 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF829) DDE_Tnp_IS1 PF03400.8 gi|21228798|ref|NP_634720.1| - 1.6e-07 31.4 0.1 1.8e-07 31.3 0.1 1.0 1 0 0 1 1 1 1 IS1 transposase HTH_23 PF13384.1 gi|21228799|ref|NP_634721.1| - 1.1e-06 28.0 0.0 2e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.7 gi|21228799|ref|NP_634721.1| - 4.7e-06 26.0 0.0 6.8e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.1 gi|21228799|ref|NP_634721.1| - 2.1e-05 24.3 0.0 4e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.8 gi|21228799|ref|NP_634721.1| - 0.00098 18.5 5.8 0.0018 17.6 4.0 1.5 1 0 0 1 1 1 1 InsA N-terminal domain HTH_29 PF13551.1 gi|21228799|ref|NP_634721.1| - 0.0015 18.6 0.0 0.0024 17.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix Zn_Tnp_IS1595 PF12760.2 gi|21228799|ref|NP_634721.1| - 0.0019 17.9 3.3 0.0029 17.3 2.3 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Sigma70_r4_2 PF08281.7 gi|21228799|ref|NP_634721.1| - 0.0059 16.0 0.0 0.012 15.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.1 gi|21228799|ref|NP_634721.1| - 0.0065 15.9 0.0 0.02 14.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain DUF2387 PF09526.5 gi|21228799|ref|NP_634721.1| - 0.018 14.9 1.0 0.025 14.4 0.2 1.6 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) HTH_Tnp_1 PF01527.15 gi|21228799|ref|NP_634721.1| - 0.029 14.3 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 Transposase Zn-ribbon_8 PF09723.5 gi|21228799|ref|NP_634721.1| - 0.033 14.1 2.7 1.6 8.7 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF1670 PF07900.6 gi|21228799|ref|NP_634721.1| - 0.057 12.6 0.0 0.074 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) zf-Mss51 PF13824.1 gi|21228799|ref|NP_634721.1| - 0.083 12.7 2.3 0.24 11.2 1.6 1.8 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Elf1 PF05129.8 gi|21228799|ref|NP_634721.1| - 0.084 12.5 0.9 0.16 11.7 0.6 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zinc-ribbons_6 PF07191.7 gi|21228799|ref|NP_634721.1| - 0.1 12.4 0.5 0.2 11.4 0.4 1.5 1 0 0 1 1 1 0 zinc-ribbons Rubredoxin PF00301.15 gi|21228799|ref|NP_634721.1| - 0.1 12.4 2.0 0.7 9.8 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin OrfB_Zn_ribbon PF07282.6 gi|21228799|ref|NP_634721.1| - 0.17 11.5 3.7 0.42 10.3 1.3 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.1 gi|21228799|ref|NP_634721.1| - 0.21 11.3 3.7 0.41 10.3 2.6 1.4 1 0 0 1 1 1 0 Nudix N-terminal zf-C2H2 PF00096.21 gi|21228799|ref|NP_634721.1| - 1.7 9.1 4.8 0.65 10.4 0.3 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-ISL3 PF14690.1 gi|21228799|ref|NP_634721.1| - 2.8 8.0 9.8 2.4 8.2 0.5 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GIIM PF08388.6 gi|21228800|ref|NP_634722.1| - 3.5e-26 90.7 5.4 7.8e-26 89.6 3.7 1.6 1 0 0 1 1 1 1 Group II intron, maturase-specific domain RVT_1 PF00078.22 gi|21228800|ref|NP_634722.1| - 1.7e-14 53.6 0.1 5.4e-14 52.0 0.0 1.8 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) Phage_C PF12025.3 gi|21228800|ref|NP_634722.1| - 0.028 14.3 0.0 0.07 13.0 0.0 1.7 1 0 0 1 1 1 0 Phage protein C rve PF00665.21 gi|21228801|ref|NP_634723.1| - 4.3e-09 36.5 0.0 8.1e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.1 gi|21228801|ref|NP_634723.1| - 4.4e-06 26.1 0.0 1.4e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 Integrase core domain MbeD_MobD PF04899.7 gi|21228801|ref|NP_634723.1| - 0.14 12.0 0.1 1 9.3 0.1 2.2 1 1 0 1 1 1 0 MbeD/MobD like IstB_IS21 PF01695.12 gi|21228802|ref|NP_634724.1| - 8.7e-70 233.7 0.0 1.3e-69 233.1 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.24 gi|21228802|ref|NP_634724.1| - 7.9e-05 22.8 0.0 0.00017 21.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.13 gi|21228802|ref|NP_634724.1| - 0.00015 21.4 0.0 0.00034 20.3 0.0 1.6 1 1 0 1 1 1 1 Bacterial dnaA protein PhoH PF02562.11 gi|21228802|ref|NP_634724.1| - 0.00017 20.8 0.0 0.00027 20.2 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_14 PF13173.1 gi|21228802|ref|NP_634724.1| - 0.00018 21.3 0.5 0.00069 19.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.1 gi|21228802|ref|NP_634724.1| - 0.00021 21.2 0.1 0.00078 19.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|21228802|ref|NP_634724.1| - 0.00034 20.7 0.6 0.2 11.7 0.1 3.1 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.7 gi|21228802|ref|NP_634724.1| - 0.00065 18.8 0.0 0.001 18.1 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_17 PF13207.1 gi|21228802|ref|NP_634724.1| - 0.0012 19.6 1.6 0.0035 18.1 0.2 2.3 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.1 gi|21228802|ref|NP_634724.1| - 0.0014 18.2 0.0 0.0027 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.1 gi|21228802|ref|NP_634724.1| - 0.0079 15.6 0.1 0.019 14.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|21228802|ref|NP_634724.1| - 0.0093 15.7 0.1 0.027 14.2 0.1 1.8 1 0 0 1 1 1 1 Part of AAA domain ArgK PF03308.11 gi|21228802|ref|NP_634724.1| - 0.013 14.3 0.1 0.039 12.7 0.0 1.8 2 0 0 2 2 2 0 ArgK protein AAA_5 PF07728.9 gi|21228802|ref|NP_634724.1| - 0.014 15.1 0.2 0.062 13.0 0.1 2.1 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF258 PF03193.11 gi|21228802|ref|NP_634724.1| - 0.015 14.4 0.0 0.026 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 KTI12 PF08433.5 gi|21228802|ref|NP_634724.1| - 0.016 14.3 0.0 0.11 11.7 0.0 2.1 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_10 PF12846.2 gi|21228802|ref|NP_634724.1| - 0.039 13.3 1.5 0.21 10.9 0.1 2.5 2 1 1 3 3 3 0 AAA-like domain AAA_16 PF13191.1 gi|21228802|ref|NP_634724.1| - 0.039 13.9 0.0 0.091 12.7 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.10 gi|21228802|ref|NP_634724.1| - 0.043 13.5 0.8 7.1 6.3 0.1 2.5 1 1 1 2 2 2 0 NTPase DUF2893 PF11459.3 gi|21228802|ref|NP_634724.1| - 0.054 13.3 0.2 8.8 6.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknwon function (DUF2893) RmuC PF02646.11 gi|21228802|ref|NP_634724.1| - 0.066 12.0 0.1 0.3 9.8 0.0 2.0 2 0 0 2 2 2 0 RmuC family MMR_HSR1 PF01926.18 gi|21228802|ref|NP_634724.1| - 0.08 12.9 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.1 gi|21228802|ref|NP_634724.1| - 0.086 13.1 4.1 0.07 13.4 0.6 2.7 2 2 0 2 2 2 0 AAA domain Mg_chelatase PF01078.16 gi|21228802|ref|NP_634724.1| - 0.13 11.4 0.0 0.28 10.3 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI SEFIR PF08357.6 gi|21228803|ref|NP_634725.1| - 8.8e-09 35.5 0.0 1.4e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 SEFIR domain TIR_2 PF13676.1 gi|21228803|ref|NP_634725.1| - 0.0011 19.0 0.0 0.0062 16.6 0.0 2.2 2 1 0 2 2 2 1 TIR domain AAA_21 PF13304.1 gi|21228804|ref|NP_634726.1| - 1.6e-15 57.8 9.8 1.6e-15 57.8 6.8 4.0 2 2 1 3 3 3 1 AAA domain AAA_15 PF13175.1 gi|21228804|ref|NP_634726.1| - 4e-15 55.8 15.8 4e-15 55.8 11.0 3.1 2 2 0 2 2 2 1 AAA ATPase domain DUF2813 PF11398.3 gi|21228804|ref|NP_634726.1| - 8.2e-10 38.2 0.0 1.3e-06 27.7 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_23 PF13476.1 gi|21228804|ref|NP_634726.1| - 5.3e-06 26.8 10.0 5.3e-06 26.8 6.9 3.3 2 2 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|21228804|ref|NP_634726.1| - 6.4e-05 22.2 0.0 0.0022 17.2 0.0 2.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21228804|ref|NP_634726.1| - 0.0068 15.9 0.0 0.014 14.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.18 gi|21228804|ref|NP_634726.1| - 0.0095 15.8 0.0 0.031 14.2 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.1 gi|21228804|ref|NP_634726.1| - 0.021 14.2 0.0 0.048 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain Methylase_S PF01420.14 gi|21228805|ref|NP_634727.1| - 1.6e-43 148.5 0.0 5.1e-23 81.8 0.0 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.11 gi|21228806|ref|NP_634728.1| - 1.2e-64 218.3 0.0 1.6e-64 217.9 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21228806|ref|NP_634728.1| - 1.2e-14 54.9 0.3 9e-13 48.8 0.0 2.7 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21228806|ref|NP_634728.1| - 4e-14 52.6 0.0 9.6e-14 51.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21228806|ref|NP_634728.1| - 9.2e-09 35.1 0.0 1.6e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|21228806|ref|NP_634728.1| - 6.5e-05 22.3 0.0 0.00021 20.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|21228806|ref|NP_634728.1| - 0.00018 21.1 0.0 0.0019 17.8 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|21228806|ref|NP_634728.1| - 0.0023 17.6 0.0 0.023 14.4 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.6 gi|21228806|ref|NP_634728.1| - 0.0074 16.6 0.0 0.018 15.3 0.0 1.6 1 0 0 1 1 1 1 Eco57I restriction-modification methylase ResIII PF04851.10 gi|21228807|ref|NP_634729.1| - 1.3e-31 109.8 1.2 1.8e-30 106.1 0.0 2.7 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|21228807|ref|NP_634729.1| - 9.5e-30 103.6 1.9 9.5e-30 103.6 1.3 1.8 2 0 0 2 2 2 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|21228807|ref|NP_634729.1| - 4.6e-13 49.3 0.0 7.1e-08 32.4 0.0 3.0 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|21228807|ref|NP_634729.1| - 1.1e-07 31.4 0.1 1.3e-06 27.9 0.0 2.4 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21228807|ref|NP_634729.1| - 7.6e-06 25.7 0.1 2.2e-05 24.2 0.1 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_19 PF13245.1 gi|21228807|ref|NP_634729.1| - 3.4e-05 23.5 0.1 7.4e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 Part of AAA domain UvrD-helicase PF00580.16 gi|21228807|ref|NP_634729.1| - 0.0002 20.8 0.1 0.0002 20.8 0.1 2.5 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain T2SE PF00437.15 gi|21228807|ref|NP_634729.1| - 0.023 13.5 0.0 0.062 12.2 0.0 1.6 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF853 PF05872.7 gi|21228807|ref|NP_634729.1| - 0.025 12.9 0.0 0.049 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.13 gi|21228807|ref|NP_634729.1| - 0.049 13.1 0.0 0.72 9.2 0.0 2.6 3 0 0 3 3 3 0 FtsK/SpoIIIE family STAT_int PF02865.12 gi|21228807|ref|NP_634729.1| - 0.096 12.6 1.7 3 7.8 0.2 3.1 3 0 0 3 3 3 0 STAT protein, protein interaction domain Phasin PF05597.6 gi|21228808|ref|NP_634730.1| - 2.8e-08 33.6 6.0 9.4e-07 28.6 4.2 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF883 PF05957.8 gi|21228808|ref|NP_634730.1| - 0.0073 16.6 1.6 0.0073 16.6 1.1 1.9 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF883) Seryl_tRNA_N PF02403.17 gi|21228808|ref|NP_634730.1| - 0.0091 16.0 6.6 0.012 15.6 4.6 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain OCD_Mu_crystall PF02423.10 gi|21228808|ref|NP_634730.1| - 0.014 14.1 0.0 0.015 14.0 0.0 1.1 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family GatB_Yqey PF02637.13 gi|21228808|ref|NP_634730.1| - 0.017 14.8 1.8 0.02 14.5 1.3 1.2 1 0 0 1 1 1 0 GatB domain TipAS PF07739.8 gi|21228808|ref|NP_634730.1| - 0.024 14.9 3.8 1.3 9.4 1.4 2.1 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain DGCR6 PF07324.6 gi|21228808|ref|NP_634730.1| - 0.077 12.4 4.0 0.096 12.1 2.7 1.0 1 0 0 1 1 1 0 DiGeorge syndrome critical region 6 (DGCR6) protein CARD PF00619.16 gi|21228808|ref|NP_634730.1| - 0.14 12.0 4.0 0.19 11.5 1.4 1.9 2 0 0 2 2 2 0 Caspase recruitment domain DUF4011 PF13195.1 gi|21228808|ref|NP_634730.1| - 0.17 11.8 2.0 0.2 11.6 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4011) Apolipoprotein PF01442.13 gi|21228808|ref|NP_634730.1| - 0.18 11.2 5.2 1.9 7.9 0.2 1.8 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain cobW PF02492.14 gi|21228808|ref|NP_634730.1| - 0.2 11.1 1.2 0.22 10.9 0.9 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain V_ATPase_I PF01496.14 gi|21228808|ref|NP_634730.1| - 0.24 9.1 3.6 0.27 9.0 2.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BMFP PF04380.8 gi|21228808|ref|NP_634730.1| - 0.38 10.9 8.6 3.1 8.0 5.9 2.3 1 1 0 1 1 1 0 Membrane fusogenic activity DUF1319 PF07028.6 gi|21228808|ref|NP_634730.1| - 0.39 10.9 5.5 2.2 8.5 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) SPX PF03105.14 gi|21228808|ref|NP_634730.1| - 0.39 10.4 4.2 0.49 10.1 2.9 1.3 1 0 0 1 1 1 0 SPX domain Fib_alpha PF08702.5 gi|21228808|ref|NP_634730.1| - 1.1 9.4 4.1 1.4 9.0 0.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family HSBP1 PF06825.7 gi|21228808|ref|NP_634730.1| - 1.4 8.5 5.7 7.6 6.1 0.2 2.7 2 1 0 2 2 2 0 Heat shock factor binding protein 1 Pox_A_type_inc PF04508.7 gi|21228808|ref|NP_634730.1| - 1.7 8.6 12.2 0.85 9.5 1.1 3.8 3 2 1 4 4 4 0 Viral A-type inclusion protein repeat RRF PF01765.14 gi|21228808|ref|NP_634730.1| - 1.7 8.0 10.6 5.1 6.5 5.7 1.9 1 1 0 1 1 1 0 Ribosome recycling factor DivIC PF04977.10 gi|21228808|ref|NP_634730.1| - 3.4 7.2 8.4 1.5 8.3 0.2 2.5 2 1 0 2 2 2 0 Septum formation initiator Prefoldin PF02996.12 gi|21228808|ref|NP_634730.1| - 5.2 6.7 8.8 4.8 6.8 1.0 2.2 1 1 1 2 2 2 0 Prefoldin subunit DUF1515 PF07439.6 gi|21228808|ref|NP_634730.1| - 6.3 6.6 7.8 3.7 7.4 3.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF4200 PF13863.1 gi|21228810|ref|NP_634732.1| - 0.01 15.7 11.8 0.01 15.7 8.2 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) LIF_OSM PF01291.12 gi|21228810|ref|NP_634732.1| - 0.015 15.1 1.2 1.2 9.0 0.1 3.1 1 1 0 2 2 2 0 LIF / OSM family Laminin_II PF06009.7 gi|21228810|ref|NP_634732.1| - 0.059 13.1 21.4 2.4 7.9 0.8 3.5 1 1 2 3 3 3 0 Laminin Domain II Peptidase_S46 PF10459.4 gi|21228810|ref|NP_634732.1| - 0.062 11.7 21.7 0.012 14.1 12.6 1.5 1 1 0 1 1 1 0 Peptidase S46 HisKA_3 PF07730.8 gi|21228810|ref|NP_634732.1| - 0.08 13.2 0.8 3.3 8.1 0.0 2.7 2 0 0 2 2 2 0 Histidine kinase DUF2203 PF09969.4 gi|21228810|ref|NP_634732.1| - 0.36 11.0 16.9 0.76 10.0 2.5 3.7 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) DUF3452 PF11934.3 gi|21228810|ref|NP_634732.1| - 0.51 9.6 6.5 1.9 7.8 4.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) Reo_sigmaC PF04582.7 gi|21228810|ref|NP_634732.1| - 1.4 7.9 3.9 7.5 5.6 0.1 2.1 1 1 1 2 2 2 0 Reovirus sigma C capsid protein Acetyltransf_11 PF13720.1 gi|21228810|ref|NP_634732.1| - 1.7 8.8 5.7 12 6.1 0.1 3.3 2 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF2312 PF10073.4 gi|21228810|ref|NP_634732.1| - 2.4 7.5 7.5 0.87 8.9 0.7 3.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) NPV_P10 PF05531.7 gi|21228810|ref|NP_634732.1| - 6.4 7.0 10.5 12 6.2 0.3 4.1 2 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF724 PF05266.9 gi|21228810|ref|NP_634732.1| - 8.4 5.9 23.8 0.091 12.3 6.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF724) Birna_VP5 PF03042.9 gi|21228811|ref|NP_634733.1| - 0.032 13.7 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Birnavirus VP5 protein Reo_sigmaC PF04582.7 gi|21228812|ref|NP_634734.1| - 0.08 12.1 8.7 0.47 9.5 1.1 2.1 1 1 1 2 2 2 0 Reovirus sigma C capsid protein DUF4094 PF13334.1 gi|21228812|ref|NP_634734.1| - 5.3 7.4 9.9 3 8.2 0.0 3.5 2 2 3 5 5 5 0 Domain of unknown function (DUF4094) HTH_24 PF13412.1 gi|21228813|ref|NP_634735.1| - 0.00015 21.1 0.3 0.00031 20.0 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|21228813|ref|NP_634735.1| - 0.0018 17.8 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.14 gi|21228813|ref|NP_634735.1| - 0.0021 17.7 0.1 0.0049 16.5 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|21228813|ref|NP_634735.1| - 0.0022 17.6 0.1 0.0051 16.4 0.1 1.5 1 0 0 1 1 1 1 MarR family CarboxypepD_reg PF13620.1 gi|21228813|ref|NP_634735.1| - 0.0076 16.2 0.1 0.02 14.9 0.0 1.8 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain RNA_pol_Rpc34 PF05158.7 gi|21228813|ref|NP_634735.1| - 0.0093 15.1 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit FeoC PF09012.5 gi|21228813|ref|NP_634735.1| - 0.011 15.3 0.1 0.023 14.4 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Penicillinase_R PF03965.11 gi|21228813|ref|NP_634735.1| - 0.026 14.6 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor DUF4480 PF13715.1 gi|21228813|ref|NP_634735.1| - 0.028 14.4 0.1 0.083 12.9 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4480) HTH_27 PF13463.1 gi|21228813|ref|NP_634735.1| - 0.032 14.5 0.0 0.078 13.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|21228813|ref|NP_634735.1| - 0.032 14.0 0.1 0.074 12.8 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_IclR PF09339.5 gi|21228813|ref|NP_634735.1| - 0.036 13.6 0.0 0.067 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF3982 PF13138.1 gi|21228813|ref|NP_634735.1| - 0.057 13.3 0.2 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3982) ACT PF01842.20 gi|21228814|ref|NP_634736.1| - 0.0046 16.4 0.5 1 8.8 0.0 2.7 2 1 1 3 3 3 2 ACT domain DUF2007 PF09413.5 gi|21228814|ref|NP_634736.1| - 0.018 14.8 0.0 2.2 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2007) Homoserine_dh PF00742.14 gi|21228815|ref|NP_634737.1| - 2.2e-58 196.8 0.3 4.5e-58 195.8 0.1 1.6 2 0 0 2 2 2 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|21228815|ref|NP_634737.1| - 2.6e-09 37.4 0.1 5.1e-09 36.5 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|21228815|ref|NP_634737.1| - 0.00036 20.2 0.3 0.00088 18.9 0.2 1.7 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Saccharop_dh PF03435.13 gi|21228815|ref|NP_634737.1| - 0.0086 15.0 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase DNA_ligase_A_M PF01068.16 gi|21228816|ref|NP_634738.1| - 7.1e-55 185.5 0.2 1.2e-54 184.8 0.1 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|21228816|ref|NP_634738.1| - 1e-43 149.2 0.4 2.3e-43 148.0 0.2 1.7 1 1 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|21228816|ref|NP_634738.1| - 4.3e-21 75.1 0.0 9.5e-21 74.0 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region mRNA_cap_enzyme PF01331.14 gi|21228816|ref|NP_634738.1| - 0.0064 16.2 0.0 0.64 9.6 0.0 2.7 1 1 0 1 1 1 1 mRNA capping enzyme, catalytic domain DNA_ligase_OB_2 PF14743.1 gi|21228816|ref|NP_634738.1| - 0.11 12.2 0.4 18 5.0 0.0 2.5 2 0 0 2 2 2 0 DNA ligase OB-like domain MMR_HSR1 PF01926.18 gi|21228817|ref|NP_634739.1| - 7.2e-15 54.9 0.0 9.8e-15 54.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|21228817|ref|NP_634739.1| - 4.1e-11 42.4 0.1 1.5e-09 37.2 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.22 gi|21228817|ref|NP_634739.1| - 4.1e-05 23.1 0.0 0.0015 17.9 0.0 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Septin PF00735.13 gi|21228817|ref|NP_634739.1| - 0.00011 21.3 0.0 0.00018 20.5 0.0 1.4 1 0 0 1 1 1 1 Septin MobB PF03205.9 gi|21228817|ref|NP_634739.1| - 0.0067 16.1 0.3 0.043 13.5 0.0 2.1 1 1 1 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Dynamin_N PF00350.18 gi|21228817|ref|NP_634739.1| - 0.0091 15.8 0.4 0.039 13.7 0.3 1.9 1 1 0 1 1 1 1 Dynamin family DUF258 PF03193.11 gi|21228817|ref|NP_634739.1| - 0.01 15.0 0.2 0.035 13.3 0.1 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|21228817|ref|NP_634739.1| - 0.019 15.2 0.0 0.039 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain Miro PF08477.8 gi|21228817|ref|NP_634739.1| - 0.11 13.0 0.1 0.17 12.4 0.1 1.7 1 1 0 1 1 1 0 Miro-like protein AAA_17 PF13207.1 gi|21228817|ref|NP_634739.1| - 0.12 13.2 0.1 0.22 12.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain DHHA1 PF02272.14 gi|21228818|ref|NP_634740.1| - 1.6e-15 56.5 0.2 3.7e-15 55.3 0.1 1.6 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|21228818|ref|NP_634740.1| - 7.9e-08 32.0 0.0 1.6e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 DHH family DUF11 PF01345.13 gi|21228819|ref|NP_634741.1| - 1e-19 70.3 6.8 5.1e-13 48.8 0.8 3.7 3 0 0 3 3 3 3 Domain of unknown function DUF11 CARDB PF07705.6 gi|21228819|ref|NP_634741.1| - 1.2e-10 41.3 10.3 0.00035 20.5 0.1 3.5 3 0 0 3 3 3 3 CARDB TRAP_beta PF05753.9 gi|21228819|ref|NP_634741.1| - 4.8e-09 35.6 8.5 0.0011 18.1 0.1 3.2 2 1 1 3 3 3 3 Translocon-associated protein beta (TRAPB) BatD PF13584.1 gi|21228819|ref|NP_634741.1| - 3.1e-08 32.6 9.6 1.8e-05 23.5 0.6 2.7 3 0 0 3 3 3 2 Oxygen tolerance DUF2393 PF09624.5 gi|21228819|ref|NP_634741.1| - 2.7e-05 23.7 9.8 0.11 12.0 0.1 3.6 3 0 0 3 3 3 3 Protein of unknown function (DUF2393) NPCBM_assoc PF10633.4 gi|21228819|ref|NP_634741.1| - 0.2 11.7 4.1 19 5.3 0.1 3.6 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF1034 PF06280.7 gi|21228819|ref|NP_634741.1| - 0.56 10.6 6.7 0.33 11.3 1.9 2.6 2 1 0 2 2 2 0 Fn3-like domain (DUF1034) Glyco_hydro_2 PF00703.16 gi|21228819|ref|NP_634741.1| - 0.87 10.0 6.5 3.5 8.1 0.2 3.3 2 1 1 3 3 3 0 Glycosyl hydrolases family 2 Big_3_4 PF13754.1 gi|21228819|ref|NP_634741.1| - 2.4 8.5 9.9 1.7 9.0 2.1 3.4 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) NIF3 PF01784.13 gi|21228820|ref|NP_634742.1| - 9.6e-55 185.7 0.1 1.2e-54 185.4 0.0 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) HD PF01966.17 gi|21228821|ref|NP_634743.1| - 3.9e-05 23.6 0.7 6.9e-05 22.8 0.5 1.5 1 1 0 1 1 1 1 HD domain TPR_1 PF00515.23 gi|21228822|ref|NP_634744.1| - 1.1e-165 531.2 83.4 2.9e-10 39.2 0.0 25.7 26 0 0 26 26 26 23 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21228822|ref|NP_634744.1| - 1.2e-148 482.9 77.0 4.5e-14 51.8 0.6 15.3 11 3 3 16 16 16 15 TPR repeat TPR_2 PF07719.12 gi|21228822|ref|NP_634744.1| - 2.2e-142 451.8 73.1 3.9e-08 32.5 0.0 25.5 26 0 0 26 26 26 23 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228822|ref|NP_634744.1| - 8.2e-112 364.0 9.4 6.5e-11 42.5 0.3 16.0 8 4 9 17 17 17 16 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228822|ref|NP_634744.1| - 6.6e-95 303.5 65.6 8.2e-06 25.6 0.0 25.4 24 1 1 25 25 25 18 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228822|ref|NP_634744.1| - 1.3e-90 290.5 100.7 3e-07 29.7 0.1 24.2 22 4 4 26 26 24 19 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228822|ref|NP_634744.1| - 1.3e-83 274.9 49.3 9.9e-10 38.2 0.3 15.5 5 4 13 18 18 18 18 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228822|ref|NP_634744.1| - 1e-82 264.9 11.5 0.00013 22.3 0.0 22.5 7 6 16 23 23 23 17 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228822|ref|NP_634744.1| - 1.1e-75 249.4 12.0 1.8e-07 30.8 0.0 12.7 6 2 10 16 16 16 14 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228822|ref|NP_634744.1| - 1.5e-63 211.0 35.7 6.7e-08 32.7 0.2 14.8 9 4 5 16 16 16 12 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228822|ref|NP_634744.1| - 2.9e-48 157.8 58.3 0.0078 15.9 0.0 22.2 22 2 2 24 24 21 12 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21228822|ref|NP_634744.1| - 1.7e-42 141.0 46.1 0.004 17.5 0.1 22.6 23 0 0 23 23 23 7 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228822|ref|NP_634744.1| - 6.9e-38 128.6 46.0 1.8e-05 24.7 0.2 11.2 5 3 8 13 13 13 12 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.3 gi|21228822|ref|NP_634744.1| - 5.1e-24 84.9 18.0 0.00032 19.6 0.0 9.8 1 1 6 9 9 9 8 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.1 gi|21228822|ref|NP_634744.1| - 7.9e-24 83.2 37.2 0.03 14.2 0.0 17.5 16 4 4 20 20 19 6 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.13 gi|21228822|ref|NP_634744.1| - 1.3e-19 69.8 74.3 0.064 13.1 0.2 21.0 22 1 0 22 22 22 5 MIT (microtubule interacting and transport) domain DUF3856 PF12968.2 gi|21228822|ref|NP_634744.1| - 2.4e-15 56.6 18.6 0.23 11.2 0.1 13.3 8 4 3 13 13 12 3 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|21228822|ref|NP_634744.1| - 4.3e-12 45.6 23.7 3.2e-05 23.1 1.3 8.7 3 3 9 12 12 12 3 Tetratricopeptide repeat TPR_5 PF12688.2 gi|21228822|ref|NP_634744.1| - 9.8e-12 44.9 16.5 1.6e-07 31.4 0.3 9.2 4 3 4 10 10 9 1 Tetratrico peptide repeat TPR_10 PF13374.1 gi|21228822|ref|NP_634744.1| - 1.9e-11 43.4 32.1 0.64 10.0 0.0 15.0 16 0 0 16 16 15 2 Tetratricopeptide repeat BTAD PF03704.12 gi|21228822|ref|NP_634744.1| - 4.8e-10 39.9 19.4 0.0064 16.8 0.2 8.6 4 2 6 11 11 10 5 Bacterial transcriptional activator domain ChAPs PF09295.5 gi|21228822|ref|NP_634744.1| - 6.2e-07 28.5 3.2 0.048 12.4 0.0 5.2 4 1 0 5 5 5 2 ChAPs (Chs5p-Arf1p-binding proteins) FAT PF02259.18 gi|21228822|ref|NP_634744.1| - 8.8e-07 28.2 21.4 0.072 12.0 0.2 8.2 4 3 4 8 8 8 2 FAT domain TPR_4 PF07721.9 gi|21228822|ref|NP_634744.1| - 0.0003 20.9 17.2 2.8 8.6 0.9 8.6 9 0 0 9 9 8 1 Tetratricopeptide repeat DDT PF02791.12 gi|21228822|ref|NP_634744.1| - 0.00065 19.4 0.0 9.6 6.0 0.0 6.5 8 2 1 9 9 6 0 DDT domain PPR PF01535.15 gi|21228822|ref|NP_634744.1| - 0.0038 17.1 19.0 22 5.2 0.1 12.0 15 0 0 15 15 13 0 PPR repeat Rapsyn_N PF10579.4 gi|21228822|ref|NP_634744.1| - 0.017 14.8 2.3 4.6 7.1 0.0 5.4 6 1 1 7 7 5 0 Rapsyn N-terminal myristoylation and linker region TPR_3 PF07720.7 gi|21228822|ref|NP_634744.1| - 0.02 14.7 38.5 23 4.9 0.4 13.9 16 0 0 16 16 14 0 Tetratricopeptide repeat EST1_DNA_bind PF10373.4 gi|21228822|ref|NP_634744.1| - 0.037 13.2 2.9 6.4 5.9 0.0 4.4 4 1 0 4 4 4 0 Est1 DNA/RNA binding domain DUF627 PF04781.7 gi|21228822|ref|NP_634744.1| - 0.24 11.0 16.5 27 4.4 0.0 8.1 7 3 2 10 10 9 0 Protein of unknown function (DUF627) dCMP_cyt_deam_1 PF00383.17 gi|21228824|ref|NP_634746.1| - 4.2e-24 84.1 0.0 5.5e-24 83.7 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.1 gi|21228824|ref|NP_634746.1| - 0.013 15.1 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 MafB19-like deaminase DUF3663 PF12404.3 gi|21228824|ref|NP_634746.1| - 0.05 13.3 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 Peptidase PPDK_N PF01326.14 gi|21228825|ref|NP_634747.1| - 3.5e-90 302.3 0.0 6.3e-90 301.5 0.0 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|21228825|ref|NP_634747.1| - 3.8e-59 199.9 0.1 5.8e-59 199.3 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|21228825|ref|NP_634747.1| - 1.5e-24 85.3 0.3 3.8e-24 84.0 0.2 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain zf-ribbon_3 PF13248.1 gi|21228826|ref|NP_634748.1| - 0.00039 19.5 0.6 0.00056 19.0 0.4 1.3 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|21228826|ref|NP_634748.1| - 0.00095 18.4 1.2 0.0013 17.9 0.8 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding DZR PF12773.2 gi|21228826|ref|NP_634748.1| - 0.0073 16.1 1.9 0.037 13.8 1.5 1.4 1 1 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.7 gi|21228826|ref|NP_634748.1| - 0.016 15.0 0.7 0.017 14.9 0.5 1.1 1 0 0 1 1 1 0 zinc-ribbons RecR PF02132.10 gi|21228826|ref|NP_634748.1| - 0.02 14.2 1.9 0.34 10.3 0.0 2.1 1 1 1 2 2 2 0 RecR protein OrfB_Zn_ribbon PF07282.6 gi|21228826|ref|NP_634748.1| - 0.025 14.2 1.1 0.033 13.8 0.7 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DNA_ligase_ZBD PF03119.11 gi|21228826|ref|NP_634748.1| - 0.026 14.1 2.4 0.026 14.1 1.6 1.9 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain RNA_POL_M_15KD PF02150.11 gi|21228826|ref|NP_634748.1| - 0.068 12.8 1.7 0.09 12.4 1.2 1.3 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF35_N PF12172.3 gi|21228826|ref|NP_634748.1| - 0.076 12.9 1.6 6.4 6.8 0.1 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-CHY PF05495.7 gi|21228826|ref|NP_634748.1| - 0.11 12.6 0.6 0.11 12.6 0.4 1.1 1 0 0 1 1 1 0 CHY zinc finger Ogr_Delta PF04606.7 gi|21228826|ref|NP_634748.1| - 0.14 11.8 2.6 1.7 8.3 0.5 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Rubredoxin PF00301.15 gi|21228826|ref|NP_634748.1| - 0.2 11.5 2.0 4.8 7.1 0.2 2.1 2 0 0 2 2 2 0 Rubredoxin zf-TFIIB PF13453.1 gi|21228826|ref|NP_634748.1| - 0.23 10.6 2.1 0.54 9.4 1.5 1.6 1 1 0 1 1 1 0 Transcription factor zinc-finger Tnp_zf-ribbon_2 PF13842.1 gi|21228826|ref|NP_634748.1| - 0.25 11.7 2.4 7.6 7.0 0.1 2.1 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-HIT PF04438.11 gi|21228826|ref|NP_634748.1| - 0.31 10.7 2.8 3.2 7.4 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_2 PF13240.1 gi|21228826|ref|NP_634748.1| - 0.63 9.6 7.5 9.5 5.8 5.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|21228826|ref|NP_634748.1| - 0.74 9.8 3.6 0.99 9.4 0.4 2.0 1 1 1 2 2 2 0 Zinc ribbon domain Cys_rich_KTR PF14205.1 gi|21228826|ref|NP_634748.1| - 1 8.8 3.0 4.7 6.7 0.2 2.0 1 1 1 2 2 2 0 Cysteine-rich KTR UPF0547 PF10571.4 gi|21228826|ref|NP_634748.1| - 1.1 9.0 7.0 5.3 6.8 4.8 1.9 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Y1_Tnp PF01797.11 gi|21228827|ref|NP_634749.1| - 2.3e-24 85.5 0.1 2.7e-24 85.3 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.5 gi|21228827|ref|NP_634749.1| - 0.051 12.8 0.0 0.097 11.9 0.0 1.4 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) NinG PF05766.7 gi|21228828|ref|NP_634750.1| - 0.0026 17.5 5.6 0.0036 17.0 3.9 1.2 1 0 0 1 1 1 1 Bacteriophage Lambda NinG protein zf-C2H2_4 PF13894.1 gi|21228828|ref|NP_634750.1| - 1.6 9.2 5.1 0.79 10.1 0.5 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Peptidase_C39_2 PF13529.1 gi|21228829|ref|NP_634751.1| - 6.3e-13 49.2 2.7 6.9e-13 49.1 0.2 2.3 2 1 0 2 2 2 1 Peptidase_C39 like family Cytochrom_D1 PF02239.11 gi|21228830|ref|NP_634752.1| - 2.5e-16 58.9 10.2 9e-07 27.5 0.1 3.9 2 2 2 4 4 4 4 Cytochrome D1 heme domain Lactonase PF10282.4 gi|21228830|ref|NP_634752.1| - 3.2e-16 59.3 5.5 1.8e-06 27.2 0.1 3.8 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller SGL PF08450.7 gi|21228830|ref|NP_634752.1| - 2.9e-12 46.5 9.0 5.8e-05 22.5 0.3 4.2 1 1 3 4 4 4 3 SMP-30/Gluconolaconase/LRE-like region Str_synth PF03088.11 gi|21228830|ref|NP_634752.1| - 7.4e-08 32.3 0.4 0.73 9.9 0.0 4.9 2 1 3 5 5 5 1 Strictosidine synthase NHL PF01436.16 gi|21228830|ref|NP_634752.1| - 6.5e-07 29.0 16.9 0.018 15.0 0.3 5.6 6 0 0 6 6 5 3 NHL repeat PD40 PF07676.7 gi|21228830|ref|NP_634752.1| - 2.5e-06 27.0 6.5 4.8 6.9 0.1 5.8 5 1 1 6 6 6 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.15 gi|21228830|ref|NP_634752.1| - 2.5e-06 27.3 11.1 0.47 10.4 0.1 5.4 3 2 2 5 5 5 2 Arylesterase SBP56 PF05694.6 gi|21228830|ref|NP_634752.1| - 0.0003 19.4 0.3 3.3 6.0 0.0 4.5 1 1 3 4 4 4 1 56kDa selenium binding protein (SBP56) DUF1513 PF07433.6 gi|21228830|ref|NP_634752.1| - 0.001 18.0 1.5 0.18 10.6 0.1 3.4 2 1 2 4 4 4 1 Protein of unknown function (DUF1513) Me-amine-dh_H PF06433.6 gi|21228830|ref|NP_634752.1| - 0.001 17.7 11.6 0.047 12.3 1.2 3.7 1 1 3 4 4 4 4 Methylamine dehydrogenase heavy chain (MADH) CPSase_L_chain PF00289.17 gi|21228830|ref|NP_634752.1| - 0.0011 18.9 1.5 0.34 11.0 0.0 3.5 3 1 0 3 3 3 1 Carbamoyl-phosphate synthase L chain, N-terminal domain DUF4102 PF13356.1 gi|21228830|ref|NP_634752.1| - 0.0013 18.6 0.0 5.6 6.9 0.0 4.4 2 1 3 6 6 6 1 Domain of unknown function (DUF4102) MMPL PF03176.10 gi|21228830|ref|NP_634752.1| - 0.0053 15.5 6.1 0.011 14.4 0.8 2.7 1 1 2 3 3 3 1 MMPL family P_proprotein PF01483.15 gi|21228830|ref|NP_634752.1| - 0.0091 15.7 1.0 21 4.9 0.0 5.0 5 1 1 6 6 6 0 Proprotein convertase P-domain DUF839 PF05787.8 gi|21228830|ref|NP_634752.1| - 0.0098 14.8 5.8 0.1 11.4 4.0 2.6 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF839) Kelch_6 PF13964.1 gi|21228830|ref|NP_634752.1| - 0.21 11.8 9.5 4.8 7.5 0.1 5.0 7 1 1 8 8 5 0 Kelch motif PBCV_basic_adap PF08789.5 gi|21228830|ref|NP_634752.1| - 0.29 10.8 11.1 12 5.6 0.1 4.5 5 0 0 5 5 4 0 PBCV-specific basic adaptor domain Pectinesterase PF01095.14 gi|21228830|ref|NP_634752.1| - 2.1 6.8 14.8 0.011 14.3 2.6 2.4 2 1 1 3 3 3 0 Pectinesterase PQQ_3 PF13570.1 gi|21228830|ref|NP_634752.1| - 2.8 8.3 21.2 4.5 7.6 0.5 5.5 5 0 0 5 5 5 0 PQQ-like domain Y1_Tnp PF01797.11 gi|21228831|ref|NP_634753.1| - 4.6e-21 74.9 0.1 5e-21 74.7 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like AAA_4 PF04326.9 gi|21228832|ref|NP_634754.1| - 1.9e-22 79.6 0.0 3e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 Divergent AAA domain MarC PF01914.12 gi|21228833|ref|NP_634755.1| - 8e-55 185.1 18.2 8.9e-55 184.9 12.6 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.11 gi|21228833|ref|NP_634755.1| - 2.8e-06 26.9 13.1 9.9e-06 25.1 9.1 1.8 1 1 0 1 1 1 1 Integral membrane protein TerC family LysE PF01810.13 gi|21228833|ref|NP_634755.1| - 7.9e-06 25.2 10.7 1.5e-05 24.3 7.4 1.5 1 1 0 1 1 1 1 LysE type translocator PsbX PF06596.6 gi|21228833|ref|NP_634755.1| - 0.0051 16.4 0.9 0.0051 16.4 0.6 3.6 4 0 0 4 4 4 1 Photosystem II reaction centre X protein (PsbX) DUF4134 PF13572.1 gi|21228833|ref|NP_634755.1| - 0.43 10.7 11.1 0.055 13.5 2.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) Oxidored_q3 PF00499.15 gi|21228833|ref|NP_634755.1| - 2.1 8.1 20.0 2e+02 1.7 13.9 2.6 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCLP PF12304.3 gi|21228833|ref|NP_634755.1| - 2.6 7.4 11.8 2.5 7.4 2.6 2.2 2 0 0 2 2 2 0 Beta-casein like protein CobD_Cbib PF03186.8 gi|21228833|ref|NP_634755.1| - 4.1 6.4 6.1 0.33 9.9 0.1 1.9 2 0 0 2 2 2 0 CobD/Cbib protein DUF805 PF05656.9 gi|21228833|ref|NP_634755.1| - 6.7 6.5 13.7 0.9 9.3 2.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF805) HSDR_N PF04313.9 gi|21228835|ref|NP_634757.1| - 1.8e-45 155.0 0.8 1.8e-45 155.0 0.5 3.5 4 1 1 5 5 5 1 Type I restriction enzyme R protein N terminus (HSDR_N) DUF3387 PF11867.3 gi|21228835|ref|NP_634757.1| - 3.6e-22 78.7 19.2 3.6e-22 78.7 13.3 2.9 3 1 0 3 3 3 1 Domain of unknown function (DUF3387) ResIII PF04851.10 gi|21228835|ref|NP_634757.1| - 2.3e-15 56.8 0.1 2.3e-15 56.8 0.1 3.0 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Glycos_transf_3 PF00591.16 gi|21228835|ref|NP_634757.1| - 0.052 12.9 0.1 1.8 7.9 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase family, a/b domain Prismane PF03063.15 gi|21228835|ref|NP_634757.1| - 1.4 7.1 3.6 0.53 8.5 0.1 2.0 2 0 0 2 2 2 0 Prismane/CO dehydrogenase family DUF2680 PF10925.3 gi|21228837|ref|NP_634759.1| - 0.052 13.4 0.1 1 9.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Methylase_S PF01420.14 gi|21228841|ref|NP_634763.1| - 3.2e-27 95.5 4.8 3.2e-21 76.0 0.2 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain N6_Mtase PF02384.11 gi|21228842|ref|NP_634764.1| - 7.2e-97 324.2 0.0 9.3e-97 323.8 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21228842|ref|NP_634764.1| - 2.7e-24 86.1 2.6 6.2e-24 84.9 0.7 2.2 2 0 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21228842|ref|NP_634764.1| - 5.3e-10 39.3 0.0 9.5e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21228842|ref|NP_634764.1| - 5.9e-10 39.0 0.0 1e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|21228842|ref|NP_634764.1| - 5.2e-06 25.9 0.0 1.3e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase small domain Prefoldin PF02996.12 gi|21228842|ref|NP_634764.1| - 0.0078 15.8 0.7 1.2 8.7 0.0 2.7 2 0 0 2 2 2 1 Prefoldin subunit Methyltransf_31 PF13847.1 gi|21228842|ref|NP_634764.1| - 0.0084 15.7 0.0 0.021 14.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|21228842|ref|NP_634764.1| - 0.012 15.0 0.0 0.025 13.9 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_25 PF13649.1 gi|21228842|ref|NP_634764.1| - 0.034 14.5 0.0 0.17 12.2 0.0 2.2 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.5 gi|21228842|ref|NP_634764.1| - 0.036 13.6 0.4 0.26 10.8 0.1 2.1 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase potato_inhibit PF00280.13 gi|21228842|ref|NP_634764.1| - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Potato inhibitor I family MSA-2c PF12238.3 gi|21228843|ref|NP_634765.1| - 0.37 10.4 4.9 0.59 9.7 3.4 1.3 1 0 0 1 1 1 0 Merozoite surface antigen 2c PEGA PF08308.6 gi|21228844|ref|NP_634766.1| - 5.9e-47 157.3 0.3 9.6e-23 79.7 0.0 3.3 3 0 0 3 3 3 2 PEGA domain Kelch_4 PF13418.1 gi|21228844|ref|NP_634766.1| - 8.2e-08 31.8 4.2 6.5 6.6 0.1 6.9 7 0 0 7 7 7 2 Galactose oxidase, central domain DPPIV_N PF00930.16 gi|21228844|ref|NP_634766.1| - 0.00017 20.2 23.2 0.41 9.1 1.0 5.9 1 1 5 6 6 6 5 Dipeptidyl peptidase IV (DPP IV) N-terminal region Kelch_3 PF13415.1 gi|21228844|ref|NP_634766.1| - 0.002 18.2 12.1 30 4.9 0.0 7.1 6 1 1 7 7 7 0 Galactose oxidase, central domain DUF295 PF03478.13 gi|21228844|ref|NP_634766.1| - 0.033 13.5 18.8 1.7 8.1 0.0 6.7 7 0 0 7 7 7 0 Protein of unknown function (DUF295) Plug PF07715.10 gi|21228844|ref|NP_634766.1| - 0.41 10.9 4.7 4.9 7.5 0.9 3.7 3 1 0 3 3 3 0 TonB-dependent Receptor Plug Domain NUDIX PF00293.23 gi|21228845|ref|NP_634767.1| - 9.8e-11 41.4 0.0 1.1e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Colicin-DNase PF12639.2 gi|21228845|ref|NP_634767.1| - 0.035 14.3 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin SK_channel PF03530.9 gi|21228847|ref|NP_634769.1| - 0.13 12.1 0.1 0.13 12.1 0.1 2.3 2 0 0 2 2 2 0 Calcium-activated SK potassium channel Ctr PF04145.10 gi|21228848|ref|NP_634770.1| - 0.093 12.7 0.1 0.093 12.7 0.1 2.5 3 0 0 3 3 3 0 Ctr copper transporter family GCD14 PF08704.5 gi|21228848|ref|NP_634770.1| - 0.59 9.5 2.0 0.84 9.0 1.4 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Rubrerythrin PF02915.12 gi|21228849|ref|NP_634771.1| - 0.00095 19.4 0.6 2 8.7 0.0 3.3 3 0 0 3 3 3 2 Rubrerythrin Phage_min_cap2 PF06152.6 gi|21228849|ref|NP_634771.1| - 0.37 9.7 5.1 0.048 12.6 0.4 1.7 2 0 0 2 2 2 0 Phage minor capsid protein 2 PocR PF10114.4 gi|21228850|ref|NP_634772.1| - 1.1e-68 229.8 0.4 2.4e-68 228.6 0.0 1.9 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.1 gi|21228850|ref|NP_634772.1| - 1.4e-37 128.1 0.0 6.9e-17 61.7 0.0 5.6 5 0 0 5 5 5 4 PAS domain HisKA_2 PF07568.7 gi|21228850|ref|NP_634772.1| - 1.2e-31 108.3 0.6 1.2e-31 108.3 0.5 3.2 3 0 0 3 3 3 1 Histidine kinase PAS PF00989.19 gi|21228850|ref|NP_634772.1| - 2.2e-31 107.9 0.0 7e-15 54.7 0.0 4.6 4 0 0 4 4 4 4 PAS fold PAS_4 PF08448.5 gi|21228850|ref|NP_634772.1| - 2.5e-25 88.6 0.0 2.7e-09 37.0 0.0 5.2 4 2 0 4 4 4 4 PAS fold PAS_3 PF08447.6 gi|21228850|ref|NP_634772.1| - 2.4e-15 56.4 0.0 1.2e-06 28.4 0.0 4.0 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|21228850|ref|NP_634772.1| - 7.2e-12 44.7 0.0 0.0012 18.6 0.0 4.9 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.21 gi|21228850|ref|NP_634772.1| - 7.4e-10 38.5 0.1 2e-09 37.1 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|21228850|ref|NP_634772.1| - 2e-08 34.4 0.0 0.00066 19.9 0.0 3.5 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.2 gi|21228850|ref|NP_634772.1| - 5.7e-06 26.3 0.3 7.7 6.5 0.0 6.0 5 2 0 5 5 5 1 PAS fold HATPase_c_2 PF13581.1 gi|21228850|ref|NP_634772.1| - 0.0025 17.5 0.0 0.0059 16.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|21228850|ref|NP_634772.1| - 0.0034 17.7 0.6 0.019 15.3 0.0 2.5 2 0 0 2 2 2 1 HWE histidine kinase Peptidase_M20 PF01546.23 gi|21228851|ref|NP_634773.1| - 1.1e-18 67.4 0.0 1.7e-18 66.8 0.0 1.3 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|21228851|ref|NP_634773.1| - 0.00089 18.9 0.0 0.0018 17.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.9 gi|21228851|ref|NP_634773.1| - 0.0094 14.7 0.0 0.51 9.0 0.0 3.3 3 1 1 4 4 4 1 M42 glutamyl aminopeptidase UPF0114 PF03350.11 gi|21228852|ref|NP_634774.1| - 5.4e-27 94.1 5.6 8.8e-27 93.4 3.9 1.3 1 0 0 1 1 1 1 Uncharacterized protein family, UPF0114 DsbD PF02683.10 gi|21228852|ref|NP_634774.1| - 0.043 13.4 5.4 0.78 9.2 0.0 2.5 1 1 1 2 2 2 0 Cytochrome C biogenesis protein transmembrane region YrhK PF14145.1 gi|21228852|ref|NP_634774.1| - 0.73 9.5 4.5 6.1 6.5 0.1 2.9 2 1 0 2 2 2 0 YrhK-like protein Cation_efflux PF01545.16 gi|21228852|ref|NP_634774.1| - 2.4 7.1 6.4 0.071 12.1 0.3 1.5 2 0 0 2 2 2 0 Cation efflux family DUF1269 PF06897.7 gi|21228853|ref|NP_634775.1| - 1.3e-36 124.6 0.4 1.8e-36 124.2 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Gly-zipper_OmpA PF13436.1 gi|21228853|ref|NP_634775.1| - 0.00083 18.9 0.0 0.0012 18.4 0.0 1.2 1 0 0 1 1 1 1 Glycine-zipper containing OmpA-like membrane domain Gly-zipper_Omp PF13488.1 gi|21228853|ref|NP_634775.1| - 0.0026 17.3 2.9 0.0044 16.6 2.0 1.4 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.1 gi|21228853|ref|NP_634775.1| - 0.0087 15.5 6.1 0.069 12.6 4.3 2.1 1 1 0 1 1 1 1 YMGG-like Gly-zipper DUF456 PF04306.8 gi|21228853|ref|NP_634775.1| - 0.015 15.2 1.9 0.02 14.8 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Bacteriocin_IIc PF10439.4 gi|21228853|ref|NP_634775.1| - 3.1 7.9 8.9 14 5.8 6.1 1.9 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Romo1 PF10247.4 gi|21228853|ref|NP_634775.1| - 7.9 6.7 8.1 1.4 9.1 0.7 2.2 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 UPF0118 PF01594.11 gi|21228854|ref|NP_634776.1| - 6.5e-43 146.9 37.9 7.4e-43 146.7 26.3 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 Phage_integrase PF00589.17 gi|21228855|ref|NP_634777.1| - 2.8e-08 33.6 0.0 5e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family RRM_6 PF14259.1 gi|21228855|ref|NP_634777.1| - 0.083 12.8 0.0 0.39 10.7 0.0 2.2 1 1 1 2 2 2 0 RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) DUF927 PF06048.6 gi|21228856|ref|NP_634778.1| - 1.2e-55 188.7 0.0 2.3e-55 187.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF927) DSHCT PF08148.7 gi|21228858|ref|NP_634780.1| - 0.044 13.0 0.8 0.19 10.9 0.1 2.2 1 1 2 3 3 3 0 DSHCT (NUC185) domain ApoLp-III PF07464.6 gi|21228858|ref|NP_634780.1| - 0.5 10.3 4.4 0.34 10.9 0.3 2.4 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) CENP-F_leu_zip PF10473.4 gi|21228858|ref|NP_634780.1| - 1 9.2 14.0 2.7 7.8 8.1 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IncA PF04156.9 gi|21228858|ref|NP_634780.1| - 4.7 6.7 7.9 3.5 7.1 4.3 1.6 1 1 0 1 1 1 0 IncA protein BLOC1_2 PF10046.4 gi|21228859|ref|NP_634781.1| - 0.037 14.1 5.2 0.047 13.8 1.6 2.0 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CAS_CSE1 PF03378.10 gi|21228859|ref|NP_634781.1| - 0.044 12.0 0.2 0.047 11.9 0.2 1.1 1 0 0 1 1 1 0 CAS/CSE protein, C-terminus SAC3 PF12209.3 gi|21228859|ref|NP_634781.1| - 0.081 13.0 1.4 0.14 12.3 0.9 1.3 1 0 0 1 1 1 0 Leucine permease transcriptional regulator helical domain Tup_N PF08581.5 gi|21228859|ref|NP_634781.1| - 0.15 12.2 7.5 0.25 11.5 3.3 2.1 1 1 1 2 2 2 0 Tup N-terminal LexA_DNA_bind PF01726.11 gi|21228860|ref|NP_634782.1| - 0.0001 21.7 1.1 0.032 13.7 0.2 2.6 2 1 0 2 2 2 2 LexA DNA binding domain HTH_38 PF13936.1 gi|21228860|ref|NP_634782.1| - 0.00069 19.1 0.6 0.0015 18.0 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain EAP30 PF04157.11 gi|21228860|ref|NP_634782.1| - 0.0057 15.8 0.8 0.4 9.8 0.1 2.1 1 1 1 2 2 2 2 EAP30/Vps36 family FaeA PF04703.7 gi|21228860|ref|NP_634782.1| - 0.008 16.3 0.1 0.17 12.0 0.0 2.4 2 0 0 2 2 2 1 FaeA-like protein IF2_N PF04760.10 gi|21228860|ref|NP_634782.1| - 0.012 15.2 0.2 7 6.3 0.0 3.3 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region Pox_A3L PF05288.6 gi|21228860|ref|NP_634782.1| - 0.016 14.9 0.4 0.051 13.3 0.1 1.9 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF3895 PF13034.1 gi|21228860|ref|NP_634782.1| - 0.11 11.9 0.7 3.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3895) HTH_11 PF08279.7 gi|21228860|ref|NP_634782.1| - 0.15 11.6 1.2 4.5 6.9 0.1 2.8 3 0 0 3 3 3 0 HTH domain Ribosomal_S25 PF03297.10 gi|21228860|ref|NP_634782.1| - 0.19 11.8 5.2 0.081 12.9 1.9 1.6 2 0 0 2 2 2 0 S25 ribosomal protein DUF1700 PF08006.6 gi|21228864|ref|NP_634786.1| - 5.3 6.3 5.7 6.4 6.0 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Resolvase PF00239.16 gi|21228865|ref|NP_634787.1| - 2e-32 112.0 0.8 2e-32 112.0 0.5 1.4 2 0 0 2 2 2 1 Resolvase, N terminal domain NYD-SP28 PF14772.1 gi|21228865|ref|NP_634787.1| - 0.3 11.1 0.0 0.3 11.1 0.0 2.4 2 1 0 2 2 2 0 Sperm tail Tom22 PF04281.8 gi|21228866|ref|NP_634788.1| - 0.026 14.0 0.2 0.045 13.2 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Mitochondr_Som1 PF11093.3 gi|21228866|ref|NP_634788.1| - 0.039 13.7 1.3 0.058 13.2 0.7 1.5 1 1 0 1 1 1 0 Mitochondrial export protein Som1 AgrD PF05931.6 gi|21228866|ref|NP_634788.1| - 0.045 13.3 0.0 0.091 12.4 0.0 1.5 1 0 0 1 1 1 0 Staphylococcal AgrD protein DUF106 PF01956.11 gi|21228866|ref|NP_634788.1| - 0.087 12.3 0.1 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF106 CsgG PF03783.9 gi|21228868|ref|NP_634790.1| - 0.041 12.9 0.1 0.051 12.6 0.0 1.2 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG Zot PF05707.7 gi|21228869|ref|NP_634791.1| - 0.0025 17.2 0.5 0.21 11.0 0.0 2.5 3 0 0 3 3 3 2 Zonular occludens toxin (Zot) AAA_25 PF13481.1 gi|21228869|ref|NP_634791.1| - 0.02 14.2 0.0 0.033 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain ResIII PF04851.10 gi|21228869|ref|NP_634791.1| - 0.051 13.4 0.8 0.32 10.7 0.0 2.4 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit Tub_2 PF04525.7 gi|21228870|ref|NP_634792.1| - 5e-12 45.5 0.2 5.8e-12 45.3 0.1 1.1 1 0 0 1 1 1 1 Tubby C 2 YorP PF09629.5 gi|21228870|ref|NP_634792.1| - 0.098 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 YorP protein Fe-ADH PF00465.14 gi|21228871|ref|NP_634793.1| - 5.3e-127 423.4 3.5 6.2e-127 423.2 2.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|21228871|ref|NP_634793.1| - 3.4e-18 65.8 2.3 1.7e-10 40.6 0.0 2.2 1 1 1 2 2 2 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.1 gi|21228871|ref|NP_634793.1| - 0.0032 16.8 0.2 0.026 13.8 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein GDE_C PF06202.9 gi|21228872|ref|NP_634794.1| - 5.1e-141 469.6 0.0 1.4e-140 468.2 0.0 1.6 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|21228872|ref|NP_634794.1| - 6.5e-62 208.6 0.0 9.2e-62 208.1 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.8 gi|21228872|ref|NP_634794.1| - 4.7e-05 22.2 2.3 0.00012 20.8 1.6 1.6 1 1 0 1 1 1 1 Protein of unknown function, DUF608 Glyco_hydro_100 PF12899.2 gi|21228872|ref|NP_634794.1| - 0.0016 16.8 0.3 0.13 10.5 0.0 2.3 2 0 0 2 2 2 2 Alkaline and neutral invertase Bac_rhamnosid PF05592.6 gi|21228872|ref|NP_634794.1| - 0.027 12.6 0.0 0.037 12.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase DUF377 PF04041.8 gi|21228873|ref|NP_634795.1| - 2.3e-59 200.6 0.0 2.9e-59 200.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF377) Fimbrial_PilY2 PF14481.1 gi|21228873|ref|NP_634795.1| - 0.14 11.5 0.0 1.1 8.6 0.0 2.2 2 0 0 2 2 2 0 Type 4 fimbrial biogenesis protein PilY2 MarR_2 PF12802.2 gi|21228874|ref|NP_634796.1| - 9.5e-07 28.3 0.0 1.1e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|21228874|ref|NP_634796.1| - 5e-05 22.8 0.0 6.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|21228874|ref|NP_634796.1| - 0.0027 17.3 0.0 0.0038 16.9 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21228874|ref|NP_634796.1| - 0.0055 16.0 0.0 0.011 15.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|21228874|ref|NP_634796.1| - 0.008 15.8 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|21228874|ref|NP_634796.1| - 0.011 16.0 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1495 PF07381.6 gi|21228874|ref|NP_634796.1| - 0.021 14.4 0.0 0.41 10.3 0.0 2.0 1 1 1 2 2 2 0 Winged helix DNA-binding domain (DUF1495) HTH_5 PF01022.15 gi|21228874|ref|NP_634796.1| - 0.023 14.3 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.15 gi|21228874|ref|NP_634796.1| - 0.027 14.6 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.6 gi|21228874|ref|NP_634796.1| - 0.051 13.4 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.2 gi|21228874|ref|NP_634796.1| - 0.099 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma54_DBD PF04552.8 gi|21228874|ref|NP_634796.1| - 0.13 11.8 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Sigma-54, DNA binding domain Crp PF00325.15 gi|21228874|ref|NP_634796.1| - 0.13 11.7 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_Crp_2 PF13545.1 gi|21228874|ref|NP_634796.1| - 0.13 12.0 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PAS_9 PF13426.1 gi|21228875|ref|NP_634797.1| - 2.5e-49 165.9 0.5 3.5e-16 59.4 0.0 4.5 4 0 0 4 4 4 4 PAS domain PAS_3 PF08447.6 gi|21228875|ref|NP_634797.1| - 3e-38 129.7 0.8 1.6e-21 76.1 0.0 5.1 5 0 0 5 5 5 3 PAS fold PAS_4 PF08448.5 gi|21228875|ref|NP_634797.1| - 7.5e-34 116.0 0.0 4.3e-11 42.8 0.0 4.2 4 0 0 4 4 4 4 PAS fold PAS PF00989.19 gi|21228875|ref|NP_634797.1| - 2.2e-33 114.4 0.0 1.1e-12 47.6 0.0 4.4 4 0 0 4 4 4 4 PAS fold HATPase_c PF02518.21 gi|21228875|ref|NP_634797.1| - 2.5e-29 101.2 0.1 6.3e-29 99.9 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21228875|ref|NP_634797.1| - 4.3e-19 68.2 0.1 1.2e-18 66.8 0.1 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.1 gi|21228875|ref|NP_634797.1| - 6.7e-11 41.6 0.0 0.00024 20.8 0.0 3.9 4 0 0 4 4 4 2 PAS domain HATPase_c_5 PF14501.1 gi|21228875|ref|NP_634797.1| - 4.5e-05 23.0 0.0 0.00012 21.7 0.0 1.8 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.1 gi|21228875|ref|NP_634797.1| - 0.00068 19.3 0.7 0.0024 17.5 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FtsA PF14450.1 gi|21228875|ref|NP_634797.1| - 0.1 12.4 2.4 1.7 8.5 0.0 3.3 3 0 0 3 3 3 0 Cell division protein FtsA Tweety PF04906.8 gi|21228875|ref|NP_634797.1| - 0.17 10.2 0.1 0.45 8.8 0.1 1.6 1 0 0 1 1 1 0 Tweety PrsW-protease PF13367.1 gi|21228877|ref|NP_634799.1| - 6.6e-32 110.2 17.5 6.6e-32 110.2 12.1 1.5 2 0 0 2 2 2 1 Protease prsW family Acylphosphatase PF00708.13 gi|21228879|ref|NP_634801.1| - 4.5e-19 68.3 0.0 5e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DmpG_comm PF07836.6 gi|21228879|ref|NP_634801.1| - 0.044 13.1 0.1 0.068 12.5 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain Cation_efflux PF01545.16 gi|21228880|ref|NP_634802.1| - 1.3e-64 218.0 5.3 1.5e-64 217.8 3.7 1.0 1 0 0 1 1 1 1 Cation efflux family Metalloenzyme PF01676.13 gi|21228881|ref|NP_634803.1| - 1.2e-10 41.2 0.0 1.9e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|21228881|ref|NP_634803.1| - 9.8e-07 28.4 0.0 4.6e-06 26.1 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|21228881|ref|NP_634803.1| - 0.00051 19.3 0.0 0.0015 17.8 0.0 1.7 2 0 0 2 2 2 1 Sulfatase Alk_phosphatase PF00245.15 gi|21228881|ref|NP_634803.1| - 0.0083 14.8 0.0 0.018 13.7 0.0 1.5 1 0 0 1 1 1 1 Alkaline phosphatase DUF89 PF01937.14 gi|21228882|ref|NP_634804.1| - 1.3e-55 188.6 0.1 1.6e-55 188.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 RNA_bind_2 PF10133.4 gi|21228883|ref|NP_634805.1| - 1.1e-23 82.9 1.1 1.2e-23 82.8 0.8 1.0 1 0 0 1 1 1 1 Predicted RNA-binding protein YabP PF07873.6 gi|21228883|ref|NP_634805.1| - 0.0035 16.8 0.4 0.0042 16.6 0.3 1.3 1 1 0 1 1 1 1 YabP family Gp_dh_C PF02800.15 gi|21228884|ref|NP_634806.1| - 4.5e-25 87.9 0.0 6.6e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|21228884|ref|NP_634806.1| - 6.2e-21 74.9 0.2 2.5e-20 72.9 0.0 2.1 2 1 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|21228884|ref|NP_634806.1| - 5.8e-11 42.3 0.1 1.5e-10 41.0 0.0 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Semialdhyde_dh PF01118.19 gi|21228884|ref|NP_634806.1| - 5.5e-05 23.4 0.1 0.00036 20.8 0.0 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|21228884|ref|NP_634806.1| - 0.00011 22.5 0.1 0.00038 20.8 0.0 1.9 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|21228884|ref|NP_634806.1| - 0.0017 17.5 0.1 0.0091 15.1 0.1 2.0 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|21228884|ref|NP_634806.1| - 0.0021 17.1 0.1 0.0037 16.2 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase GFO_IDH_MocA PF01408.17 gi|21228884|ref|NP_634806.1| - 0.0024 18.3 0.1 0.0052 17.2 0.1 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.13 gi|21228884|ref|NP_634806.1| - 0.042 13.8 0.0 0.087 12.8 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_2 PF03446.10 gi|21228884|ref|NP_634806.1| - 0.05 13.4 0.1 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|21228884|ref|NP_634806.1| - 0.12 12.8 0.2 0.36 11.2 0.2 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Inositol_P PF00459.20 gi|21228885|ref|NP_634807.1| - 1.8e-40 138.9 0.0 2e-40 138.8 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|21228885|ref|NP_634807.1| - 3.3e-08 32.7 0.1 2.3e-06 26.6 0.0 2.3 2 0 0 2 2 2 2 Fructose-1-6-bisphosphatase NAD_kinase PF01513.16 gi|21228886|ref|NP_634808.1| - 6.8e-59 198.9 0.4 8.2e-59 198.7 0.3 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|21228886|ref|NP_634808.1| - 0.039 13.3 0.0 0.081 12.3 0.0 1.5 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain HMGL-like PF00682.14 gi|21228887|ref|NP_634809.1| - 2.5e-73 246.6 2.5 3.7e-73 246.0 1.7 1.3 1 0 0 1 1 1 1 HMGL-like CTP_transf_3 PF02348.14 gi|21228887|ref|NP_634809.1| - 0.028 14.0 1.8 0.26 10.8 0.1 2.5 3 0 0 3 3 3 0 Cytidylyltransferase Ribosomal_S13 PF00416.17 gi|21228887|ref|NP_634809.1| - 0.12 12.8 0.5 5.7 7.4 0.1 2.7 2 0 0 2 2 2 0 Ribosomal protein S13/S18 DUF3160 PF11369.3 gi|21228889|ref|NP_634811.1| - 1.1e-294 978.6 1.9 1.3e-294 978.4 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) TPP_enzyme_C PF02775.16 gi|21228890|ref|NP_634812.1| - 5.7e-10 38.9 0.0 1.3e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|21228890|ref|NP_634812.1| - 0.011 15.1 0.2 0.29 10.6 0.0 2.4 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain POR_N PF01855.14 gi|21228890|ref|NP_634812.1| - 0.016 14.6 0.0 0.027 13.9 0.0 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DXP_synthase_N PF13292.1 gi|21228890|ref|NP_634812.1| - 0.021 13.7 0.1 0.034 13.0 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.19 gi|21228890|ref|NP_634812.1| - 0.024 14.1 0.0 0.056 12.9 0.0 1.5 1 1 0 1 1 1 0 Transketolase, pyrimidine binding domain DUF1743 PF08489.6 gi|21228891|ref|NP_634813.1| - 1.5e-24 86.0 0.1 2.1e-22 79.0 0.0 3.0 2 1 1 3 3 3 2 Domain of unknown function (DUF1743) FMN_red PF03358.10 gi|21228892|ref|NP_634814.1| - 7.9e-28 96.8 0.0 1.1e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21228892|ref|NP_634814.1| - 2.4e-09 36.9 0.0 2.7e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF4189 PF13827.1 gi|21228892|ref|NP_634814.1| - 0.082 13.1 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) RadC PF04002.10 gi|21228893|ref|NP_634815.1| - 4.2e-47 158.8 0.0 6.2e-47 158.3 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.1 gi|21228893|ref|NP_634815.1| - 0.00065 19.2 0.0 0.001 18.6 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain HHH PF00633.18 gi|21228893|ref|NP_634815.1| - 0.0023 17.5 0.0 0.0087 15.7 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix motif Toxin-JAB1 PF15659.1 gi|21228893|ref|NP_634815.1| - 0.0024 17.7 0.0 0.0042 16.9 0.0 1.4 1 0 0 1 1 1 1 JAB-like toxin 1 HHH_2 PF12826.2 gi|21228893|ref|NP_634815.1| - 0.0028 17.4 0.0 0.0056 16.5 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF4312 PF14189.1 gi|21228893|ref|NP_634815.1| - 0.022 14.5 1.1 0.053 13.3 0.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4312) MoaE PF02391.12 gi|21228894|ref|NP_634816.1| - 1.4e-27 95.8 0.3 2.1e-27 95.2 0.2 1.2 1 0 0 1 1 1 1 MoaE protein MobB PF03205.9 gi|21228894|ref|NP_634816.1| - 1.3e-17 63.7 0.1 2.7e-17 62.7 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.1 gi|21228894|ref|NP_634816.1| - 0.0049 16.8 1.5 0.15 12.0 0.3 2.3 2 0 0 2 2 2 1 AAA ATPase domain GBP PF02263.14 gi|21228894|ref|NP_634816.1| - 0.013 14.5 0.7 0.019 14.0 0.5 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain Miro PF08477.8 gi|21228894|ref|NP_634816.1| - 0.014 15.9 0.4 0.05 14.0 0.1 2.0 2 1 0 2 2 2 0 Miro-like protein UPF0128 PF03673.8 gi|21228894|ref|NP_634816.1| - 0.039 13.2 0.1 0.072 12.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) DUF463 PF04317.7 gi|21228894|ref|NP_634816.1| - 0.053 12.0 0.1 0.086 11.3 0.0 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 NTP_transf_3 PF12804.2 gi|21228895|ref|NP_634817.1| - 2.4e-33 115.4 0.0 3e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|21228895|ref|NP_634817.1| - 0.0018 17.8 0.0 0.0029 17.1 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF523 PF04463.7 gi|21228896|ref|NP_634818.1| - 2.5e-16 59.7 0.0 3.1e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF523) SPC25 PF06703.6 gi|21228897|ref|NP_634819.1| - 0.094 12.2 6.9 0.33 10.5 0.1 3.4 3 1 1 4 4 4 0 Microsomal signal peptidase 25 kDa subunit (SPC25) ATP_bind_3 PF01171.15 gi|21228898|ref|NP_634820.1| - 2.6e-13 49.8 0.0 4.3e-13 49.1 0.0 1.4 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.14 gi|21228898|ref|NP_634820.1| - 9.6e-07 28.7 0.0 1.5e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.11 gi|21228898|ref|NP_634820.1| - 1.3e-05 23.9 0.0 1.8e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|21228898|ref|NP_634820.1| - 1.6e-05 24.5 0.0 2.1e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|21228898|ref|NP_634820.1| - 0.00039 19.3 0.0 0.00055 18.9 0.0 1.2 1 0 0 1 1 1 1 NAD synthase ATP_bind_4 PF01902.12 gi|21228898|ref|NP_634820.1| - 0.001 18.4 0.0 0.0016 17.8 0.0 1.2 1 0 0 1 1 1 1 ATP-binding region QueC PF06508.8 gi|21228898|ref|NP_634820.1| - 0.0014 17.9 0.0 0.007 15.6 0.0 2.3 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|21228898|ref|NP_634820.1| - 0.012 15.0 0.1 0.027 13.9 0.0 1.6 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) RecR PF02132.10 gi|21228898|ref|NP_634820.1| - 0.036 13.4 1.7 0.036 13.4 1.2 3.4 4 0 0 4 4 4 0 RecR protein Ribosomal_S27e PF01667.12 gi|21228898|ref|NP_634820.1| - 0.05 13.1 0.5 0.05 13.1 0.4 2.4 2 0 0 2 2 2 0 Ribosomal protein S27 Spt5-NGN PF03439.8 gi|21228898|ref|NP_634820.1| - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section A2L_zn_ribbon PF08792.5 gi|21228898|ref|NP_634820.1| - 0.13 11.7 0.4 0.13 11.7 0.3 3.0 4 0 0 4 4 4 0 A2L zinc ribbon domain Pirin PF02678.11 gi|21228899|ref|NP_634821.1| - 1.7e-31 108.2 0.3 3e-31 107.4 0.2 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.6 gi|21228899|ref|NP_634821.1| - 1.6e-05 24.2 0.4 0.0003 20.2 0.1 2.4 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.8 gi|21228899|ref|NP_634821.1| - 0.0088 16.1 0.0 0.077 13.0 0.0 2.0 2 0 0 2 2 2 1 Pirin C-terminal cupin domain TctA PF01970.11 gi|21228900|ref|NP_634822.1| - 9.7e-101 337.1 31.8 1.2e-100 336.9 22.0 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family TMEM191C PF15194.1 gi|21228900|ref|NP_634822.1| - 0.52 10.1 3.3 0.65 9.8 0.2 2.5 3 0 0 3 3 3 0 TMEM191C family Y1_Tnp PF01797.11 gi|21228901|ref|NP_634823.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like PASTA PF03793.14 gi|21228902|ref|NP_634824.1| - 4.6e-11 42.2 0.3 1.2e-10 40.8 0.0 1.8 2 0 0 2 2 2 1 PASTA domain Tropomyosin_1 PF12718.2 gi|21228902|ref|NP_634824.1| - 0.05 13.4 4.7 0.067 13.0 3.3 1.1 1 0 0 1 1 1 0 Tropomyosin like Nup54 PF13874.1 gi|21228902|ref|NP_634824.1| - 0.097 12.3 1.0 0.14 11.7 0.7 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF3847 PF12958.2 gi|21228902|ref|NP_634824.1| - 0.12 12.1 1.2 0.31 10.8 0.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) CENP-Q PF13094.1 gi|21228902|ref|NP_634824.1| - 0.15 12.0 5.4 0.2 11.6 3.8 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Striatin PF08232.7 gi|21228902|ref|NP_634824.1| - 0.17 12.2 3.9 0.25 11.6 2.7 1.2 1 0 0 1 1 1 0 Striatin family Cortex-I_coil PF09304.5 gi|21228902|ref|NP_634824.1| - 0.32 11.0 4.9 0.17 11.9 1.4 1.8 1 1 1 2 2 2 0 Cortexillin I, coiled coil V_ATPase_I PF01496.14 gi|21228902|ref|NP_634824.1| - 0.34 8.7 1.6 0.35 8.6 1.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fmp27_WPPW PF10359.4 gi|21228902|ref|NP_634824.1| - 0.37 9.1 2.5 0.44 8.8 1.7 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF1664 PF07889.7 gi|21228902|ref|NP_634824.1| - 0.48 10.2 2.0 0.71 9.6 0.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2730 PF10805.3 gi|21228902|ref|NP_634824.1| - 0.71 9.6 3.1 0.69 9.6 1.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) IncA PF04156.9 gi|21228902|ref|NP_634824.1| - 1.3 8.6 5.9 1.7 8.1 4.1 1.3 1 0 0 1 1 1 0 IncA protein TPR_11 PF13414.1 gi|21228903|ref|NP_634825.1| - 1.4e-53 178.4 5.7 2.9e-18 65.2 0.8 3.7 2 1 3 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|21228903|ref|NP_634825.1| - 2.1e-45 150.5 2.9 2.4e-07 30.0 0.0 6.8 6 1 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228903|ref|NP_634825.1| - 6.8e-37 122.4 6.6 2e-05 24.1 0.1 6.7 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228903|ref|NP_634825.1| - 1.1e-31 108.7 4.9 1.7e-10 41.2 0.4 3.4 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228903|ref|NP_634825.1| - 7.4e-31 103.7 2.6 0.0014 18.6 0.0 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228903|ref|NP_634825.1| - 4.4e-25 85.5 6.5 0.0033 17.0 0.1 6.5 4 2 2 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228903|ref|NP_634825.1| - 6.1e-25 86.9 4.3 1.2e-08 34.8 0.0 4.3 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21228903|ref|NP_634825.1| - 9.8e-25 86.6 22.6 4.5e-08 33.3 1.0 4.5 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228903|ref|NP_634825.1| - 2e-20 71.4 9.2 0.00012 22.3 0.2 7.0 1 1 6 7 7 7 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228903|ref|NP_634825.1| - 5e-20 71.1 3.3 9.4e-08 31.8 0.1 3.9 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228903|ref|NP_634825.1| - 3.9e-13 48.1 2.4 0.0089 15.7 0.0 6.5 4 1 2 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21228903|ref|NP_634825.1| - 6.1e-10 38.8 3.3 0.84 10.2 0.1 5.7 6 0 0 6 6 5 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21228903|ref|NP_634825.1| - 3.6e-09 36.3 9.4 0.064 13.1 0.0 6.2 5 2 2 7 7 7 3 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.1 gi|21228903|ref|NP_634825.1| - 1.6e-08 34.1 8.6 1.5 8.8 0.0 5.6 5 0 0 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228903|ref|NP_634825.1| - 1.1e-06 28.6 1.6 0.053 13.6 0.4 3.0 3 1 1 4 4 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.1 gi|21228903|ref|NP_634825.1| - 2e-06 27.0 6.0 0.04 12.9 2.3 3.6 2 1 2 4 4 4 3 Tetratricopeptide repeat NARP1 PF12569.3 gi|21228903|ref|NP_634825.1| - 2.6e-06 26.4 0.5 0.024 13.4 0.1 3.3 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 PPTA PF01239.17 gi|21228903|ref|NP_634825.1| - 1.5e-05 24.0 0.0 0.0062 15.8 0.0 3.5 4 0 0 4 4 3 1 Protein prenyltransferase alpha subunit repeat BTAD PF03704.12 gi|21228903|ref|NP_634825.1| - 8.8e-05 22.8 3.0 0.34 11.1 0.5 3.3 1 1 2 3 3 3 3 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|21228903|ref|NP_634825.1| - 0.00018 21.5 5.9 0.086 12.9 0.0 4.2 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_4 PF07721.9 gi|21228903|ref|NP_634825.1| - 0.00045 20.3 1.7 0.5 10.9 0.0 4.3 5 0 0 5 5 4 1 Tetratricopeptide repeat DUF3856 PF12968.2 gi|21228903|ref|NP_634825.1| - 0.0047 16.7 1.8 24 4.7 0.1 4.7 3 2 0 4 4 4 0 Domain of Unknown Function (DUF3856) TPR_21 PF09976.4 gi|21228903|ref|NP_634825.1| - 0.0079 16.1 1.1 0.28 11.0 0.2 3.0 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_5 PF12688.2 gi|21228903|ref|NP_634825.1| - 0.02 14.9 0.6 1.6 8.8 0.1 3.1 2 2 1 3 3 3 0 Tetratrico peptide repeat MIT PF04212.13 gi|21228903|ref|NP_634825.1| - 0.025 14.4 4.5 19 5.2 0.0 4.7 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain FAT PF02259.18 gi|21228903|ref|NP_634825.1| - 0.03 13.3 0.0 9.6 5.0 0.0 2.8 2 1 1 3 3 3 0 FAT domain ChAPs PF09295.5 gi|21228903|ref|NP_634825.1| - 0.048 12.4 0.1 1.6 7.3 0.0 2.2 1 1 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Coatomer_E PF04733.9 gi|21228903|ref|NP_634825.1| - 0.07 12.3 0.2 2.9 7.0 0.0 3.0 2 1 2 4 4 4 0 Coatomer epsilon subunit PPR PF01535.15 gi|21228903|ref|NP_634825.1| - 0.087 12.8 1.9 31 4.8 0.0 3.9 4 0 0 4 4 3 0 PPR repeat TPR_1 PF00515.23 gi|21228904|ref|NP_634826.1| - 3.8e-29 99.0 5.4 3.3e-08 32.7 0.2 4.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228904|ref|NP_634826.1| - 1.4e-25 87.0 1.6 3.8e-07 29.5 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21228904|ref|NP_634826.1| - 1.5e-22 79.0 0.7 5.5e-13 48.3 0.1 2.4 2 0 0 2 2 2 2 TPR repeat TPR_8 PF13181.1 gi|21228904|ref|NP_634826.1| - 1.3e-19 68.4 6.4 6.6e-06 25.5 0.0 4.5 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228904|ref|NP_634826.1| - 5.9e-17 60.3 0.8 0.00049 20.0 0.0 4.8 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21228904|ref|NP_634826.1| - 6.8e-16 57.9 0.5 1.4e-08 34.5 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21228904|ref|NP_634826.1| - 2.2e-15 56.2 0.2 1.1e-08 34.7 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228904|ref|NP_634826.1| - 3.3e-15 56.2 0.1 1.3e-08 35.2 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228904|ref|NP_634826.1| - 2.5e-14 52.4 0.1 0.00089 19.6 0.0 4.1 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228904|ref|NP_634826.1| - 3.9e-13 48.1 1.0 0.0033 17.0 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21228904|ref|NP_634826.1| - 5.3e-11 42.5 2.4 7.5e-07 29.2 0.1 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|21228904|ref|NP_634826.1| - 2.6e-10 40.0 0.4 0.19 12.2 0.0 4.1 5 0 0 5 5 4 3 Tetratricopeptide repeat MIT PF04212.13 gi|21228904|ref|NP_634826.1| - 6.6e-10 38.7 1.3 0.027 14.3 0.0 4.1 4 0 0 4 4 4 3 MIT (microtubule interacting and transport) domain TPR_19 PF14559.1 gi|21228904|ref|NP_634826.1| - 1.3e-08 35.0 0.6 0.0039 17.4 0.0 3.2 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21228904|ref|NP_634826.1| - 4.4e-07 29.6 0.2 0.57 10.2 0.1 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.3 gi|21228904|ref|NP_634826.1| - 6.7e-07 28.4 0.1 0.0018 17.1 0.0 2.3 2 1 0 2 2 2 2 NMDA receptor-regulated protein 1 DUF3856 PF12968.2 gi|21228904|ref|NP_634826.1| - 9.7e-06 25.4 0.0 0.097 12.4 0.0 2.8 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.1 gi|21228904|ref|NP_634826.1| - 8.5e-05 22.3 3.1 1 9.2 0.0 3.7 3 1 1 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.1 gi|21228904|ref|NP_634826.1| - 0.00082 18.5 0.0 0.17 10.9 0.0 3.0 2 2 0 2 2 2 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21228904|ref|NP_634826.1| - 0.0023 17.7 0.9 3 7.7 0.1 3.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_5 PF12688.2 gi|21228904|ref|NP_634826.1| - 0.0069 16.4 0.0 5.5 7.0 0.0 2.5 1 1 0 2 2 2 1 Tetratrico peptide repeat BTAD PF03704.12 gi|21228904|ref|NP_634826.1| - 0.009 16.3 0.0 0.25 11.6 0.0 2.4 1 1 0 2 2 2 1 Bacterial transcriptional activator domain PPR PF01535.15 gi|21228904|ref|NP_634826.1| - 0.013 15.4 0.9 2.9 8.0 0.0 3.7 3 1 1 4 4 3 0 PPR repeat DUF3791 PF12668.2 gi|21228904|ref|NP_634826.1| - 0.09 12.4 0.2 9 5.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) SNAP PF14938.1 gi|21228904|ref|NP_634826.1| - 0.92 8.5 4.4 7.6 5.5 0.1 3.1 2 1 1 3 3 3 0 Soluble NSF attachment protein, SNAP CbiA PF01656.18 gi|21228905|ref|NP_634827.1| - 1.5e-12 47.3 0.0 1.9e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|21228905|ref|NP_634827.1| - 0.018 14.6 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Disaggr_repeat PF06848.6 gi|21228906|ref|NP_634828.1| - 1.7e-89 298.0 2.6 3.1e-89 297.2 1.8 1.4 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|21228906|ref|NP_634828.1| - 1.7e-88 295.2 13.3 1.7e-88 295.2 9.2 2.0 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.1 gi|21228906|ref|NP_634828.1| - 7.2e-14 51.8 27.6 4.2e-10 39.6 9.1 3.0 1 1 2 3 3 3 3 Right handed beta helix region TGFb_propeptide PF00688.13 gi|21228906|ref|NP_634828.1| - 0.034 13.4 0.0 0.44 9.8 0.0 2.1 2 0 0 2 2 2 0 TGF-beta propeptide Asn_synthase PF00733.16 gi|21228907|ref|NP_634829.1| - 3.3e-60 203.7 0.0 5.1e-60 203.1 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.1 gi|21228907|ref|NP_634829.1| - 8.7e-22 77.1 0.0 4.4e-21 74.9 0.0 1.9 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|21228907|ref|NP_634829.1| - 3.9e-15 55.9 0.0 2.1e-14 53.6 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|21228907|ref|NP_634829.1| - 0.00048 18.9 0.0 1.8 7.1 0.0 3.2 1 1 1 2 2 2 2 Glutamine amidotransferases class-II NAD_synthase PF02540.12 gi|21228907|ref|NP_634829.1| - 0.012 14.5 0.0 0.019 13.8 0.0 1.3 1 0 0 1 1 1 0 NAD synthase ATP_bind_3 PF01171.15 gi|21228907|ref|NP_634829.1| - 0.089 12.2 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 PP-loop family PurS PF02700.9 gi|21228908|ref|NP_634830.1| - 5.2e-29 100.0 0.3 5.8e-29 99.8 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.1 gi|21228909|ref|NP_634831.1| - 2.6e-48 164.1 0.0 2.9e-48 164.0 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|21228909|ref|NP_634831.1| - 1.9e-09 37.2 0.0 3e-09 36.5 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.19 gi|21228909|ref|NP_634831.1| - 7.8e-09 35.1 0.0 2.7e-08 33.4 0.0 1.8 1 1 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.9 gi|21228909|ref|NP_634831.1| - 3.9e-08 33.0 0.0 6.3e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF4066 PF13278.1 gi|21228909|ref|NP_634831.1| - 2.1e-06 27.0 0.0 3.2e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Putative amidotransferase SNO PF01174.14 gi|21228909|ref|NP_634831.1| - 6.2e-05 22.7 0.0 0.00017 21.2 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.8 gi|21228909|ref|NP_634831.1| - 0.00036 20.0 0.0 0.00083 18.8 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 FGE-sulfatase PF03781.11 gi|21228910|ref|NP_634832.1| - 5.2e-49 166.9 1.6 3.3e-48 164.3 1.1 2.0 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF1103 PF06513.6 gi|21228910|ref|NP_634832.1| - 0.02 14.2 7.6 0.033 13.6 5.3 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) DUF885 PF05960.6 gi|21228910|ref|NP_634832.1| - 0.026 13.7 0.7 0.049 12.7 0.5 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Tcp11 PF05794.8 gi|21228910|ref|NP_634832.1| - 0.085 11.5 0.1 0.11 11.1 0.1 1.1 1 0 0 1 1 1 0 T-complex protein 11 DUF3510 PF12022.3 gi|21228910|ref|NP_634832.1| - 0.13 12.4 0.2 0.21 11.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) DUF1724 PF08350.5 gi|21228911|ref|NP_634833.1| - 1.3e-21 75.8 0.0 2.8e-21 74.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21228911|ref|NP_634833.1| - 0.00012 21.6 0.0 0.00026 20.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.1 gi|21228911|ref|NP_634833.1| - 0.0044 17.3 0.0 0.0086 16.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21228911|ref|NP_634833.1| - 0.024 14.3 0.0 0.052 13.2 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|21228911|ref|NP_634833.1| - 0.043 13.6 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.7 gi|21228911|ref|NP_634833.1| - 0.062 12.9 0.4 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 HTH domain HTH_45 PF14947.1 gi|21228911|ref|NP_634833.1| - 0.1 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Herpes_TAF50 PF03326.8 gi|21228911|ref|NP_634833.1| - 0.13 11.1 0.0 0.19 10.6 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) DUF429 PF04250.8 gi|21228912|ref|NP_634834.1| - 1.4e-61 207.3 0.0 1.6e-61 207.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) tRNA-synt_His PF13393.1 gi|21228913|ref|NP_634835.1| - 0.06 12.3 1.3 0.077 12.0 0.9 1.1 1 0 0 1 1 1 0 Histidyl-tRNA synthetase B5 PF03484.10 gi|21228914|ref|NP_634836.1| - 3.1e-18 65.3 0.2 2.1e-17 62.7 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.12 gi|21228914|ref|NP_634836.1| - 4.3e-15 55.6 0.0 8.6e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.15 gi|21228914|ref|NP_634836.1| - 8.7e-07 28.3 0.1 2.4e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) ATP_bind_4 PF01902.12 gi|21228915|ref|NP_634837.1| - 1.7e-52 177.9 0.0 2.2e-52 177.6 0.0 1.1 1 0 0 1 1 1 1 ATP-binding region PIN PF01850.16 gi|21228915|ref|NP_634837.1| - 0.041 14.2 0.0 0.081 13.2 0.0 1.5 1 0 0 1 1 1 0 PIN domain RNase_HII PF01351.13 gi|21228916|ref|NP_634838.1| - 2.1e-48 164.6 0.1 2.4e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII Ribosomal_S6 PF01250.12 gi|21228916|ref|NP_634838.1| - 0.017 14.9 0.0 0.041 13.7 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein S6 Pox_polyA_pol_N PF12630.2 gi|21228916|ref|NP_634838.1| - 0.06 13.4 0.1 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain PCRF PF03462.13 gi|21228916|ref|NP_634838.1| - 0.12 12.0 0.0 0.32 10.7 0.0 1.7 2 0 0 2 2 2 0 PCRF domain Lactamase_B PF00753.22 gi|21228917|ref|NP_634839.1| - 3.1e-15 56.3 0.1 7.6e-15 55.0 0.1 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21228917|ref|NP_634839.1| - 3.2e-05 23.5 0.0 4.2e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|21228917|ref|NP_634839.1| - 0.00059 19.5 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain SseC PF04888.7 gi|21228918|ref|NP_634840.1| - 0.00032 20.1 1.2 0.00041 19.7 0.8 1.2 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Vps5 PF09325.5 gi|21228918|ref|NP_634840.1| - 0.0047 16.2 0.9 0.012 14.8 0.2 1.9 2 1 0 2 2 2 1 Vps5 C terminal like GATase PF00117.23 gi|21228919|ref|NP_634841.1| - 4.7e-48 163.1 0.0 5.9e-48 162.8 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21228919|ref|NP_634841.1| - 1.8e-17 63.4 0.0 4.6e-17 62.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.13 gi|21228920|ref|NP_634842.1| - 1.8e-94 315.8 0.0 2.4e-90 302.3 0.0 2.6 2 1 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|21228920|ref|NP_634842.1| - 5e-26 91.3 1.2 9e-25 87.3 0.6 3.0 3 1 0 3 3 3 1 Anthranilate synthase component I, N terminal region PRAI PF00697.17 gi|21228921|ref|NP_634843.1| - 2.2e-33 115.4 0.0 3.1e-33 114.9 0.0 1.2 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.12 gi|21228921|ref|NP_634843.1| - 0.0039 16.3 0.0 0.0081 15.3 0.0 1.5 2 0 0 2 2 2 1 Thiamine monophosphate synthase/TENI DUF4152 PF13680.1 gi|21228921|ref|NP_634843.1| - 0.0056 15.7 0.1 0.029 13.3 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF4152) FMN_dh PF01070.13 gi|21228921|ref|NP_634843.1| - 0.028 13.2 0.0 5.7 5.6 0.0 2.5 1 1 0 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|21228921|ref|NP_634843.1| - 0.053 12.7 0.0 0.11 11.6 0.0 1.5 2 0 0 2 2 2 0 Histidine biosynthesis protein Glyco_trans_4_4 PF13579.1 gi|21228921|ref|NP_634843.1| - 0.057 13.5 0.0 0.086 12.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain Glycos_transf_3 PF00591.16 gi|21228922|ref|NP_634844.1| - 3e-100 334.7 0.6 4.7e-100 334.1 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|21228922|ref|NP_634844.1| - 2.1e-16 59.2 0.2 4.2e-16 58.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Trp_syntA PF00290.15 gi|21228923|ref|NP_634845.1| - 1.2e-93 312.4 0.1 1.4e-93 312.1 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.12 gi|21228923|ref|NP_634845.1| - 1.4e-06 27.7 0.3 1.6e-05 24.2 0.2 2.1 2 0 0 2 2 2 1 PcrB family PA PF02225.17 gi|21228923|ref|NP_634845.1| - 3.2e-05 23.5 0.2 0.15 11.7 0.0 2.7 3 0 0 3 3 3 2 PA domain His_biosynth PF00977.16 gi|21228923|ref|NP_634845.1| - 0.00019 20.7 0.1 0.00042 19.6 0.1 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein IGPS PF00218.16 gi|21228923|ref|NP_634845.1| - 0.013 14.5 0.0 0.024 13.6 0.0 1.4 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DHO_dh PF01180.16 gi|21228923|ref|NP_634845.1| - 0.016 14.2 0.2 0.027 13.4 0.1 1.3 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase NanE PF04131.9 gi|21228923|ref|NP_634845.1| - 0.017 14.0 0.1 0.055 12.4 0.0 1.8 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PucR PF07905.6 gi|21228923|ref|NP_634845.1| - 0.038 13.5 0.1 0.17 11.4 0.0 2.1 2 1 0 2 2 2 0 Purine catabolism regulatory protein-like family FMN_dh PF01070.13 gi|21228923|ref|NP_634845.1| - 0.068 12.0 1.1 0.36 9.6 0.3 2.3 3 0 0 3 3 3 0 FMN-dependent dehydrogenase PALP PF00291.20 gi|161485666|ref|NP_634846.2| - 5.6e-39 134.1 1.7 7.8e-39 133.7 1.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme SmpB PF01668.13 gi|161485666|ref|NP_634846.2| - 0.11 12.3 0.0 0.31 10.8 0.0 1.8 1 0 0 1 1 1 0 SmpB protein IGPS PF00218.16 gi|21228925|ref|NP_634847.1| - 1.1e-65 221.2 0.0 1.3e-65 220.9 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase NanE PF04131.9 gi|21228925|ref|NP_634847.1| - 9.2e-05 21.4 0.0 0.015 14.3 0.0 3.0 3 1 0 3 3 3 1 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.9 gi|21228925|ref|NP_634847.1| - 0.0059 15.7 0.0 0.04 13.0 0.0 2.1 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG PcrB PF01884.12 gi|21228925|ref|NP_634847.1| - 0.0076 15.5 0.0 0.012 14.8 0.0 1.3 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|21228925|ref|NP_634847.1| - 0.0078 15.5 0.0 0.015 14.5 0.0 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein QRPTase_C PF01729.14 gi|21228925|ref|NP_634847.1| - 0.025 14.1 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain FMN_dh PF01070.13 gi|21228925|ref|NP_634847.1| - 0.034 12.9 0.0 0.067 12.0 0.0 1.4 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DHO_dh PF01180.16 gi|21228925|ref|NP_634847.1| - 0.064 12.2 0.0 0.45 9.4 0.0 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase IMPDH PF00478.20 gi|21228925|ref|NP_634847.1| - 0.081 11.8 0.0 0.14 10.9 0.0 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Bac_luciferase PF00296.15 gi|21228926|ref|NP_634848.1| - 7.4e-39 133.6 0.0 8.3e-39 133.5 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase Cyclase PF04199.8 gi|21228927|ref|NP_634849.1| - 1.9e-23 83.0 0.0 2.4e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase GDE_N_bis PF14742.1 gi|21228928|ref|NP_634850.1| - 2.4e-45 154.2 0.0 2.8e-45 154.0 0.0 1.0 1 0 0 1 1 1 1 N-terminal domain of (some) glycogen debranching enzymes GDE_C PF06202.9 gi|21228929|ref|NP_634851.1| - 7.5e-14 51.2 0.1 3.4e-13 49.0 0.0 1.9 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Trehalase PF01204.13 gi|21228929|ref|NP_634851.1| - 5.5e-08 31.8 0.0 7.6e-08 31.4 0.0 1.1 1 0 0 1 1 1 1 Trehalase DUF608 PF04685.8 gi|21228929|ref|NP_634851.1| - 0.0016 17.2 1.4 0.023 13.4 1.0 2.5 1 1 0 1 1 1 1 Protein of unknown function, DUF608 Bac_rhamnosid PF05592.6 gi|21228929|ref|NP_634851.1| - 0.015 13.5 0.0 0.021 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase Glyco_hydro_63 PF03200.11 gi|21228929|ref|NP_634851.1| - 0.025 12.4 0.4 0.74 7.5 0.1 2.0 1 1 1 2 2 2 0 Mannosyl oligosaccharide glucosidase Glyco_hydro_100 PF12899.2 gi|21228929|ref|NP_634851.1| - 0.12 10.7 0.0 0.92 7.8 0.0 2.0 2 0 0 2 2 2 0 Alkaline and neutral invertase Pro_isomerase PF00160.16 gi|21228931|ref|NP_634853.1| - 6.5e-51 172.5 1.6 7.3e-51 172.4 1.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_red_lgC PF02867.10 gi|21228932|ref|NP_634854.1| - 3.4e-143 478.0 0.0 7.4e-62 209.6 0.0 3.0 1 1 2 3 3 3 3 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.16 gi|21228932|ref|NP_634854.1| - 1.2e-14 53.8 0.0 2.6e-14 52.7 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain EamA PF00892.15 gi|21228933|ref|NP_634855.1| - 4.8e-25 88.0 32.9 1.6e-14 54.0 7.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21228933|ref|NP_634855.1| - 3.2e-07 30.5 28.1 5.9e-07 29.6 2.1 3.6 3 1 1 4 4 4 3 Multidrug resistance efflux transporter EamA PF00892.15 gi|21228934|ref|NP_634856.1| - 6.7e-26 90.7 31.9 1.5e-14 54.1 6.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21228934|ref|NP_634856.1| - 4.8e-07 29.9 26.2 3.4e-06 27.2 4.2 3.2 2 1 1 3 3 3 3 Multidrug resistance efflux transporter Rnf-Nqr PF02508.9 gi|21228934|ref|NP_634856.1| - 0.006 16.1 3.0 0.006 16.1 2.1 1.9 1 1 0 1 1 1 1 Rnf-Nqr subunit, membrane protein UPF0546 PF10639.4 gi|21228934|ref|NP_634856.1| - 2.1 8.2 6.9 0.59 9.9 0.7 2.8 2 1 0 2 2 2 0 Uncharacterised protein family UPF0546 ABC_tran PF00005.22 gi|21228935|ref|NP_634857.1| - 1.5e-31 109.5 0.0 2e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.14 gi|21228935|ref|NP_634857.1| - 7.2e-10 38.4 0.0 1.1e-07 31.2 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|21228935|ref|NP_634857.1| - 3.9e-09 36.8 0.0 0.00076 19.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|21228935|ref|NP_634857.1| - 6.5e-05 22.3 0.1 0.00014 21.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21228935|ref|NP_634857.1| - 0.00012 22.0 0.1 0.00036 20.5 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 gi|21228935|ref|NP_634857.1| - 0.00018 20.9 0.1 0.004 16.5 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|21228935|ref|NP_634857.1| - 0.00027 20.4 0.0 0.002 17.6 0.0 2.0 2 0 0 2 2 2 1 AAA-like domain AAA_22 PF13401.1 gi|21228935|ref|NP_634857.1| - 0.0006 19.9 0.3 0.0041 17.2 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|21228935|ref|NP_634857.1| - 0.0013 19.5 0.5 0.0028 18.4 0.1 1.7 2 1 0 2 2 1 1 AAA domain AAA_23 PF13476.1 gi|21228935|ref|NP_634857.1| - 0.0028 18.0 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.7 gi|21228935|ref|NP_634857.1| - 0.0044 16.6 0.1 0.12 12.0 0.1 2.4 1 1 1 2 2 2 1 NACHT domain DUF258 PF03193.11 gi|21228935|ref|NP_634857.1| - 0.0059 15.8 0.0 0.0088 15.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_33 PF13671.1 gi|21228935|ref|NP_634857.1| - 0.013 15.3 0.1 0.036 13.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|21228935|ref|NP_634857.1| - 0.014 15.0 0.0 0.031 14.0 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B RNA12 PF10443.4 gi|21228935|ref|NP_634857.1| - 0.018 13.5 0.0 0.038 12.4 0.0 1.5 2 0 0 2 2 2 0 RNA12 protein DUF87 PF01935.12 gi|21228935|ref|NP_634857.1| - 0.022 14.5 0.6 0.041 13.6 0.1 1.6 2 1 0 2 2 2 0 Domain of unknown function DUF87 IstB_IS21 PF01695.12 gi|21228935|ref|NP_634857.1| - 0.025 13.9 0.0 0.35 10.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21228935|ref|NP_634857.1| - 0.052 13.3 0.0 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Part of AAA domain AAA_18 PF13238.1 gi|21228935|ref|NP_634857.1| - 0.056 13.7 1.1 0.12 12.6 0.8 2.0 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|21228935|ref|NP_634857.1| - 0.056 13.4 0.6 0.15 12.0 0.4 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.1 gi|21228935|ref|NP_634857.1| - 0.056 13.0 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|21228935|ref|NP_634857.1| - 0.064 12.0 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.1 gi|21228935|ref|NP_634857.1| - 0.076 12.9 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|21228935|ref|NP_634857.1| - 0.1 12.7 0.0 0.27 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA helicase AAA_15 PF13175.1 gi|21228935|ref|NP_634857.1| - 0.1 11.5 0.0 2.4 7.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Arch_ATPase PF01637.13 gi|21228935|ref|NP_634857.1| - 0.12 11.9 0.0 0.4 10.3 0.0 1.9 2 0 0 2 2 2 0 Archaeal ATPase SH3_2 PF07653.12 gi|21228935|ref|NP_634857.1| - 0.14 11.6 0.0 0.69 9.4 0.0 2.0 2 0 0 2 2 2 0 Variant SH3 domain DUF296 PF03479.10 gi|21228936|ref|NP_634858.1| - 3.2e-16 59.0 0.0 3.6e-16 58.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF296) TrmB PF01978.14 gi|21228937|ref|NP_634859.1| - 0.0021 17.7 0.0 0.0044 16.6 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.9 gi|21228937|ref|NP_634859.1| - 0.0081 15.9 0.5 0.019 14.7 0.0 1.9 3 0 0 3 3 3 1 Transcriptional regulator PadR-like family MarR_2 PF12802.2 gi|21228937|ref|NP_634859.1| - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF387 PF04079.11 gi|21228937|ref|NP_634859.1| - 0.032 13.6 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Putative transcriptional regulators (Ypuh-like) Enolase_C PF00113.17 gi|21228938|ref|NP_634860.1| - 5.3e-116 386.7 0.7 7e-116 386.3 0.5 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|21228938|ref|NP_634860.1| - 9.1e-63 210.0 0.0 2.1e-62 208.8 0.0 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain MAAL_C PF07476.6 gi|21228938|ref|NP_634860.1| - 0.0035 16.2 0.0 0.0072 15.2 0.0 1.5 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus MR_MLE_C PF13378.1 gi|21228938|ref|NP_634860.1| - 0.034 14.1 0.0 0.087 12.8 0.0 1.7 1 0 0 1 1 1 0 Enolase C-terminal domain-like Transposase_20 PF02371.11 gi|21228939|ref|NP_634861.1| - 3.2e-29 100.8 0.0 7.8e-29 99.6 0.0 1.7 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.12 gi|21228939|ref|NP_634861.1| - 2.1e-26 92.3 0.1 3.5e-26 91.5 0.1 1.4 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.7 gi|21228939|ref|NP_634861.1| - 0.022 14.8 0.0 0.068 13.2 0.0 1.9 1 0 0 1 1 1 0 Orthopoxvirus F14 protein zf-DNA_Pol PF08996.5 gi|21228940|ref|NP_634862.1| - 0.016 14.5 0.2 0.019 14.3 0.1 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger AAA_5 PF07728.9 gi|21228941|ref|NP_634863.1| - 8.9e-26 90.2 0.0 1.8e-25 89.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|21228941|ref|NP_634863.1| - 2.8e-05 23.7 0.0 0.0002 20.9 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.24 gi|21228941|ref|NP_634863.1| - 6.9e-05 23.0 0.0 0.00023 21.3 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.12 gi|21228941|ref|NP_634863.1| - 0.015 14.7 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|21228941|ref|NP_634863.1| - 0.018 14.2 0.0 0.057 12.5 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|21228941|ref|NP_634863.1| - 0.038 13.9 0.6 0.16 11.9 0.0 2.4 2 1 0 2 2 2 0 AAA ATPase domain zf-C2H2 PF00096.21 gi|21228941|ref|NP_634863.1| - 0.049 13.9 0.5 1.8 9.1 0.1 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type AAA_25 PF13481.1 gi|21228941|ref|NP_634863.1| - 0.062 12.6 0.0 0.42 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain HypA PF01155.14 gi|21228941|ref|NP_634863.1| - 0.078 12.6 0.2 0.28 10.8 0.0 1.9 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family VWA_2 PF13519.1 gi|21228942|ref|NP_634864.1| - 2.6e-13 50.4 0.1 5.8e-13 49.3 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.9 gi|21228942|ref|NP_634864.1| - 9.7e-10 37.9 0.0 1.8e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.23 gi|21228942|ref|NP_634864.1| - 5.3e-08 32.7 0.1 9.7e-08 31.9 0.1 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.1 gi|21228942|ref|NP_634864.1| - 8.8e-07 28.7 0.0 1.1e-05 25.1 0.0 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF2828 PF11443.3 gi|21228942|ref|NP_634864.1| - 0.0083 14.3 0.0 0.013 13.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2828) DUF2201 PF09967.4 gi|21228942|ref|NP_634864.1| - 0.027 14.4 0.0 0.059 13.3 0.0 1.6 1 0 0 1 1 1 0 VWA-like domain (DUF2201) DUF444 PF04285.7 gi|21228942|ref|NP_634864.1| - 0.097 11.2 0.0 0.15 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF444) TPP_enzyme_N PF02776.13 gi|21228943|ref|NP_634865.1| - 1.7e-49 167.5 0.0 1.4e-48 164.6 0.0 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|21228943|ref|NP_634865.1| - 6.1e-40 136.2 0.1 1.2e-38 132.0 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|21228943|ref|NP_634865.1| - 8.9e-28 96.7 0.0 1.8e-27 95.7 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Pyridox_ox_2 PF12900.2 gi|21228944|ref|NP_634866.1| - 2.7e-29 101.8 0.0 3e-29 101.6 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|21228944|ref|NP_634866.1| - 1.9e-09 37.3 0.0 3e-09 36.7 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1845 PF08900.6 gi|21228944|ref|NP_634866.1| - 0.005 16.1 0.0 0.0096 15.2 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1845) Peptidase_M50 PF02163.17 gi|21228946|ref|NP_634868.1| - 0.0012 17.7 0.2 0.0012 17.7 0.1 2.7 2 1 0 2 2 2 1 Peptidase family M50 Peptidase_M50B PF13398.1 gi|21228946|ref|NP_634868.1| - 1.2 8.5 18.7 0.068 12.5 1.1 3.3 1 1 2 3 3 3 0 Peptidase M50B-like SET PF00856.23 gi|21228947|ref|NP_634869.1| - 2e-14 54.2 0.7 5.3e-12 46.3 0.5 2.1 1 1 0 1 1 1 1 SET domain AA_permease_2 PF13520.1 gi|21228948|ref|NP_634870.1| - 4.4e-27 94.6 49.7 5.5e-27 94.3 34.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|21228948|ref|NP_634870.1| - 4.4e-20 71.4 40.9 5.7e-20 71.0 28.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|21228949|ref|NP_634871.1| - 6.2e-27 94.1 48.3 8.1e-27 93.8 33.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|21228949|ref|NP_634871.1| - 1.7e-21 76.0 39.0 2.7e-21 75.4 27.0 1.2 1 0 0 1 1 1 1 Amino acid permease Enterotoxin_b PF01376.13 gi|21228950|ref|NP_634872.1| - 0.11 12.3 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain TauE PF01925.14 gi|21228951|ref|NP_634873.1| - 4.9e-46 157.1 31.6 5.8e-46 156.8 21.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MacB_PCD PF12704.2 gi|21228952|ref|NP_634874.1| - 2.2e-32 112.4 0.7 3.6e-32 111.8 0.5 1.3 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|21228952|ref|NP_634874.1| - 8.4e-25 86.8 12.6 3.4e-24 84.9 6.8 2.2 2 0 0 2 2 2 1 FtsX-like permease family MarR PF01047.17 gi|21228953|ref|NP_634875.1| - 4.5e-14 51.8 0.0 1.2e-13 50.5 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21228953|ref|NP_634875.1| - 3.4e-09 36.8 0.0 6e-09 36.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21228953|ref|NP_634875.1| - 6.7e-09 35.2 0.0 1.2e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HxlR PF01638.12 gi|21228953|ref|NP_634875.1| - 4.4e-05 23.0 0.0 9.3e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.1 gi|21228953|ref|NP_634875.1| - 0.00021 21.0 0.0 0.00042 20.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_IclR PF09339.5 gi|21228953|ref|NP_634875.1| - 0.00046 19.7 0.0 0.00096 18.6 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|21228953|ref|NP_634875.1| - 0.00096 18.8 0.1 0.0027 17.3 0.0 1.9 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.1 gi|21228953|ref|NP_634875.1| - 0.0012 18.8 0.0 0.003 17.5 0.0 1.7 1 1 1 2 2 2 1 Winged helix DNA-binding domain DUF387 PF04079.11 gi|21228953|ref|NP_634875.1| - 0.0036 16.7 0.0 0.005 16.2 0.0 1.4 1 0 0 1 1 1 1 Putative transcriptional regulators (Ypuh-like) DUF3116 PF11313.3 gi|21228953|ref|NP_634875.1| - 0.0085 15.6 0.0 0.026 14.1 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF3116) FeoC PF09012.5 gi|21228953|ref|NP_634875.1| - 0.034 13.8 0.8 0.16 11.6 0.0 2.3 2 1 0 2 2 2 0 FeoC like transcriptional regulator DUF1018 PF06252.7 gi|21228953|ref|NP_634875.1| - 0.039 14.4 0.0 0.09 13.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) DUF4364 PF14277.1 gi|21228953|ref|NP_634875.1| - 0.04 13.5 0.3 0.082 12.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) Cas_APE2256 PF09651.5 gi|21228953|ref|NP_634875.1| - 0.072 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_APE2256) Ftsk_gamma PF09397.5 gi|21228953|ref|NP_634875.1| - 0.081 12.6 0.1 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Ftsk gamma domain PadR PF03551.9 gi|21228953|ref|NP_634875.1| - 0.09 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Fe_dep_repress PF01325.14 gi|21228953|ref|NP_634875.1| - 0.09 12.7 0.1 0.38 10.7 0.0 2.0 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MMPL PF03176.10 gi|21228954|ref|NP_634876.1| - 1.5e-61 207.9 11.0 1e-30 106.5 1.6 2.2 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.3 gi|21228954|ref|NP_634876.1| - 9.2e-13 47.9 18.8 1.7e-07 30.8 4.2 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.14 gi|21228954|ref|NP_634876.1| - 5.3e-11 40.7 28.9 4.9e-06 24.2 7.2 2.2 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family Patched PF02460.13 gi|21228954|ref|NP_634876.1| - 1.8e-10 39.4 17.2 4.4e-06 24.9 5.8 2.2 2 0 0 2 2 2 2 Patched family SecD_SecF PF02355.11 gi|21228954|ref|NP_634876.1| - 1.6e-09 37.2 11.6 1.6e-09 37.2 8.0 2.9 2 1 0 2 2 2 1 Protein export membrane protein MarR PF01047.17 gi|21228955|ref|NP_634877.1| - 7.4e-11 41.5 0.1 1.3e-10 40.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21228955|ref|NP_634877.1| - 3.3e-09 36.9 0.1 6.5e-09 35.9 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21228955|ref|NP_634877.1| - 5.9e-08 32.2 0.0 1.2e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.1 gi|21228955|ref|NP_634877.1| - 0.00031 20.7 0.1 0.00071 19.5 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain B-block_TFIIIC PF04182.7 gi|21228955|ref|NP_634877.1| - 0.00056 19.7 0.0 0.0011 18.8 0.0 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_45 PF14947.1 gi|21228955|ref|NP_634877.1| - 0.00058 19.6 1.3 0.00078 19.2 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix TrmB PF01978.14 gi|21228955|ref|NP_634877.1| - 0.021 14.5 0.0 0.085 12.5 0.0 2.0 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB Ftsk_gamma PF09397.5 gi|21228955|ref|NP_634877.1| - 0.022 14.4 0.0 0.047 13.3 0.0 1.5 1 0 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.12 gi|21228955|ref|NP_634877.1| - 0.023 14.3 0.1 0.059 13.0 0.0 1.7 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|21228955|ref|NP_634877.1| - 0.035 13.6 0.0 0.093 12.3 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain FeoC PF09012.5 gi|21228955|ref|NP_634877.1| - 0.036 13.7 0.1 0.11 12.2 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator Sulfolobus_pRN PF05584.6 gi|21228955|ref|NP_634877.1| - 0.13 12.2 0.2 0.64 10.0 0.1 2.1 1 1 1 2 2 2 0 Sulfolobus plasmid regulatory protein RPA_C PF08784.6 gi|21228955|ref|NP_634877.1| - 0.15 12.4 0.1 0.48 10.8 0.0 1.9 2 1 0 2 2 2 0 Replication protein A C terminal TrmB PF01978.14 gi|21228956|ref|NP_634878.1| - 1.6e-24 85.3 0.0 2.2e-24 84.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|21228956|ref|NP_634878.1| - 3.1e-06 26.6 0.0 7e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.17 gi|21228956|ref|NP_634878.1| - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|21228956|ref|NP_634878.1| - 0.0024 17.9 0.0 0.0048 16.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.2 gi|21228956|ref|NP_634878.1| - 0.0026 17.4 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.15 gi|21228956|ref|NP_634878.1| - 0.0059 16.2 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.1 gi|21228956|ref|NP_634878.1| - 0.011 15.7 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|21228956|ref|NP_634878.1| - 0.017 14.4 0.0 0.042 13.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|21228956|ref|NP_634878.1| - 0.021 14.5 0.1 1.5 8.6 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_20 PF12840.2 gi|21228956|ref|NP_634878.1| - 0.023 14.4 0.0 0.036 13.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|21228956|ref|NP_634878.1| - 0.044 13.3 0.0 0.086 12.4 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain MerR_1 PF13411.1 gi|21228956|ref|NP_634878.1| - 0.074 12.8 0.1 5.9 6.7 0.0 2.3 2 0 0 2 2 2 0 MerR HTH family regulatory protein Penicillinase_R PF03965.11 gi|21228956|ref|NP_634878.1| - 0.1 12.6 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor UPF0118 PF01594.11 gi|21228957|ref|NP_634879.1| - 3.7e-38 131.3 16.2 4.1e-38 131.1 11.3 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 ABC_tran PF00005.22 gi|21228958|ref|NP_634880.1| - 2.3e-25 89.4 0.0 3.1e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21228958|ref|NP_634880.1| - 5.2e-14 52.8 0.7 3.4e-09 37.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|21228958|ref|NP_634880.1| - 7.2e-09 35.1 0.0 7.4e-07 28.5 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.1 gi|21228958|ref|NP_634880.1| - 0.00045 20.6 0.1 0.00091 19.6 0.1 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21228958|ref|NP_634880.1| - 0.0061 15.8 0.2 0.47 9.6 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.1 gi|21228958|ref|NP_634880.1| - 0.01 14.3 0.2 2.5 6.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|21228958|ref|NP_634880.1| - 0.015 14.7 0.3 0.026 14.0 0.2 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.1 gi|21228958|ref|NP_634880.1| - 0.022 14.6 0.2 1.8 8.4 0.0 2.3 1 1 1 2 2 2 0 AAA domain AAA PF00004.24 gi|21228958|ref|NP_634880.1| - 0.023 14.9 0.0 0.04 14.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|21228958|ref|NP_634880.1| - 0.029 14.3 0.0 0.05 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.16 gi|21228958|ref|NP_634880.1| - 0.043 12.9 0.1 0.063 12.4 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_17 PF13207.1 gi|21228958|ref|NP_634880.1| - 0.061 14.1 0.0 0.24 12.2 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|21228958|ref|NP_634880.1| - 0.078 12.8 0.1 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.1 gi|21228958|ref|NP_634880.1| - 0.094 12.2 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|21228958|ref|NP_634880.1| - 0.15 11.2 0.1 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Ion_trans_2 PF07885.11 gi|21228960|ref|NP_634882.1| - 1e-23 82.8 10.8 1.3e-23 82.5 7.5 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.26 gi|21228960|ref|NP_634882.1| - 0.0015 17.8 2.7 0.0024 17.1 1.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF2254 PF10011.4 gi|21228960|ref|NP_634882.1| - 0.011 14.2 0.0 0.013 13.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Lig_chan PF00060.21 gi|21228960|ref|NP_634882.1| - 0.09 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Ligand-gated ion channel DUF2099 PF09872.4 gi|21228961|ref|NP_634883.1| - 3.7e-114 380.1 2.8 4.2e-114 379.9 2.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Saccharop_dh PF03435.13 gi|21228961|ref|NP_634883.1| - 0.014 14.4 1.4 0.14 11.1 0.3 2.5 3 0 0 3 3 3 0 Saccharopine dehydrogenase MTH865 PF07747.6 gi|21228962|ref|NP_634884.1| - 1.1e-34 117.9 0.1 1.2e-34 117.7 0.0 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_20 PF12840.2 gi|21228963|ref|NP_634885.1| - 7.3e-06 25.7 0.7 4.3e-05 23.2 0.1 2.5 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|21228963|ref|NP_634885.1| - 6.8e-05 22.6 0.1 0.00024 20.8 0.0 2.1 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|21228963|ref|NP_634885.1| - 0.0044 16.6 0.7 0.012 15.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.5 gi|21228963|ref|NP_634885.1| - 0.012 15.2 0.9 0.089 12.5 0.1 2.5 3 0 0 3 3 3 0 Ribonuclease R winged-helix domain Mrr_N PF14338.1 gi|21228963|ref|NP_634885.1| - 0.028 14.4 0.3 0.19 11.8 0.0 2.5 3 0 0 3 3 3 0 Mrr N-terminal domain Ubiq_cyt_C_chap PF03981.7 gi|21228963|ref|NP_634885.1| - 0.036 13.9 0.1 0.064 13.1 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone HTH_24 PF13412.1 gi|21228963|ref|NP_634885.1| - 0.051 12.9 0.1 0.17 11.2 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|21228963|ref|NP_634885.1| - 0.082 12.9 0.0 0.46 10.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mod_r PF07200.8 gi|21228963|ref|NP_634885.1| - 0.099 12.5 6.5 0.43 10.4 0.7 2.8 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF4615 PF15393.1 gi|21228963|ref|NP_634885.1| - 0.14 12.3 1.9 0.29 11.3 0.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4615) DUF2099 PF09872.4 gi|21228964|ref|NP_634886.1| - 9.4e-117 388.5 1.4 1.1e-116 388.4 1.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Usp PF00582.21 gi|21228964|ref|NP_634886.1| - 0.018 15.2 0.2 0.031 14.4 0.2 1.4 1 0 0 1 1 1 0 Universal stress protein family Beta_helix PF13229.1 gi|21228966|ref|NP_634888.1| - 8.9e-10 38.5 34.5 1.6e-06 27.9 5.9 2.5 1 1 1 2 2 2 2 Right handed beta helix region Glyco_hydro_28 PF00295.12 gi|21228966|ref|NP_634888.1| - 3.3e-05 23.0 3.6 7.7e-05 21.8 2.5 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Pectate_lyase_3 PF12708.2 gi|21228966|ref|NP_634888.1| - 0.00087 19.4 17.2 0.002 18.3 11.9 1.7 1 1 0 1 1 1 1 Pectate lyase superfamily protein DUF3855 PF12967.2 gi|21228968|ref|NP_634890.1| - 0.05 13.1 0.1 0.29 10.6 0.0 2.0 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3855) AMP-binding_C_2 PF14535.1 gi|21228969|ref|NP_634891.1| - 1.1e-29 102.2 0.4 2.5e-29 101.1 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|21228969|ref|NP_634891.1| - 1.7e-21 76.1 0.0 3.8e-21 74.9 0.0 1.5 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|21228969|ref|NP_634891.1| - 0.00028 19.6 0.0 0.0006 18.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-protein synthetase, LuxE DUF1843 PF08898.5 gi|21228969|ref|NP_634891.1| - 0.1 12.6 0.1 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1843) PKD PF00801.15 gi|21228970|ref|NP_634892.1| - 5.5e-06 26.0 0.3 1.7e-05 24.4 0.2 1.8 1 1 0 1 1 1 1 PKD domain NnrU PF07298.6 gi|21228971|ref|NP_634893.1| - 4.2e-06 26.2 4.9 8.2e-06 25.3 3.4 1.4 1 1 0 1 1 1 1 NnrU protein PEMT PF04191.8 gi|21228971|ref|NP_634893.1| - 0.0003 20.8 0.2 0.00057 19.9 0.2 1.6 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF3754 PF12576.3 gi|21228971|ref|NP_634893.1| - 0.06 12.9 0.4 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3754) FLILHELTA PF10306.4 gi|21228971|ref|NP_634893.1| - 0.16 12.0 0.9 0.26 11.3 0.2 1.7 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA MFS_1 PF07690.11 gi|21228971|ref|NP_634893.1| - 0.57 8.8 7.8 0.35 9.5 4.2 1.4 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF1294 PF06961.8 gi|21228973|ref|NP_634895.1| - 2.1e-22 78.7 0.1 2.8e-22 78.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) FA_desaturase PF00487.19 gi|21228973|ref|NP_634895.1| - 0.04 13.3 2.7 0.051 13.0 1.9 1.2 1 0 0 1 1 1 0 Fatty acid desaturase Rubrerythrin PF02915.12 gi|21228974|ref|NP_634896.1| - 1e-07 32.3 2.1 1.1e-07 32.2 1.4 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.5 gi|21228974|ref|NP_634896.1| - 0.00022 21.4 0.8 0.00027 21.1 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF4142 PF13628.1 gi|21228974|ref|NP_634896.1| - 0.00085 19.3 0.0 0.0014 18.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4142) COQ7 PF03232.8 gi|21228974|ref|NP_634896.1| - 0.002 17.6 0.4 0.0023 17.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 DUF2202 PF09968.4 gi|21228974|ref|NP_634896.1| - 0.023 14.3 0.5 0.041 13.5 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein domain (DUF2202) Ferritin PF00210.19 gi|21228974|ref|NP_634896.1| - 0.028 14.1 0.5 0.033 13.9 0.3 1.2 1 0 0 1 1 1 0 Ferritin-like domain DUF305 PF03713.8 gi|21228974|ref|NP_634896.1| - 0.029 14.1 0.1 0.033 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF305) DUF211 PF02680.9 gi|21228974|ref|NP_634896.1| - 0.081 12.7 0.5 0.8 9.5 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized ArCR, COG1888 Elf-1_N PF12310.3 gi|21228974|ref|NP_634896.1| - 0.093 12.6 0.3 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 Transcription factor protein N terminal Ferritin_2 PF13668.1 gi|21228974|ref|NP_634896.1| - 0.096 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Ferritin-like domain GSDH PF07995.6 gi|21228975|ref|NP_634897.1| - 1.9e-32 112.6 0.0 6.4e-32 110.9 0.0 1.8 1 1 0 1 1 1 1 Glucose / Sorbosone dehydrogenase NHL PF01436.16 gi|21228975|ref|NP_634897.1| - 2.7e-05 23.8 0.2 0.37 10.8 0.0 3.7 5 0 0 5 5 5 2 NHL repeat SGL PF08450.7 gi|21228975|ref|NP_634897.1| - 0.0025 17.2 0.0 0.015 14.6 0.0 2.1 2 1 0 2 2 2 1 SMP-30/Gluconolaconase/LRE-like region Tachylectin PF14517.1 gi|21228975|ref|NP_634897.1| - 0.12 11.6 0.0 2.9 7.1 0.0 2.7 2 1 0 2 2 2 0 Tachylectin ATP-synt_10 PF05176.9 gi|21228976|ref|NP_634898.1| - 5.4e-19 68.4 0.0 5.9e-19 68.3 0.0 1.0 1 0 0 1 1 1 1 ATP10 protein IMS PF00817.15 gi|21228978|ref|NP_634900.1| - 2e-44 150.9 0.0 3e-44 150.4 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.3 gi|21228978|ref|NP_634900.1| - 1.8e-18 66.7 0.4 3.2e-18 65.8 0.3 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|21228978|ref|NP_634900.1| - 6.2e-11 41.6 0.0 2e-10 40.0 0.0 2.0 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|21228978|ref|NP_634900.1| - 2.7e-07 30.6 0.0 1e-06 28.8 0.0 2.0 1 1 0 1 1 1 1 Helix-hairpin-helix domain Cdd1 PF11731.3 gi|21228978|ref|NP_634900.1| - 0.00062 19.6 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.1 gi|21228978|ref|NP_634900.1| - 0.0079 16.1 0.0 0.019 14.9 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4332) TfoX_C PF04994.8 gi|21228978|ref|NP_634900.1| - 0.025 14.4 0.0 0.061 13.2 0.0 1.7 1 0 0 1 1 1 0 TfoX C-terminal domain UPF0118 PF01594.11 gi|21228979|ref|NP_634901.1| - 1.3e-40 139.4 50.8 1.4e-40 139.2 35.2 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 CytB6-F_Fe-S PF08802.5 gi|21228979|ref|NP_634901.1| - 0.11 12.4 0.5 0.11 12.4 0.3 3.2 3 1 1 4 4 4 0 Cytochrome B6-F complex Fe-S subunit Pam17 PF08566.5 gi|21228979|ref|NP_634901.1| - 5.7 6.6 5.5 21 4.7 0.1 3.1 2 1 1 3 3 3 0 Mitochondrial import protein Pam17 SDH_sah PF01972.11 gi|21228980|ref|NP_634902.1| - 3.2e-75 252.5 0.4 3.5e-75 252.4 0.2 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.18 gi|21228980|ref|NP_634902.1| - 2.5e-06 27.2 0.0 3.2e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 Clp protease Peptidase_S49 PF01343.13 gi|21228980|ref|NP_634902.1| - 0.00015 21.5 0.0 0.00029 20.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 TPR_12 PF13424.1 gi|21228981|ref|NP_634903.1| - 9e-76 249.8 16.1 8.9e-24 83.2 0.2 5.1 3 1 1 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21228981|ref|NP_634903.1| - 4.1e-74 242.6 8.8 4.4e-12 45.5 0.0 8.0 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21228981|ref|NP_634903.1| - 6.2e-50 166.7 23.6 4.8e-13 48.5 0.0 5.2 2 2 4 6 6 6 6 TPR repeat TPR_1 PF00515.23 gi|21228981|ref|NP_634903.1| - 6.4e-47 155.3 13.4 4.7e-08 32.3 0.1 8.2 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21228981|ref|NP_634903.1| - 1.8e-42 139.7 14.9 9.7e-08 31.2 0.0 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21228981|ref|NP_634903.1| - 5.1e-37 122.8 14.7 5.5e-05 22.7 0.1 8.2 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21228981|ref|NP_634903.1| - 1.8e-23 80.5 13.4 0.0076 15.9 0.1 7.5 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21228981|ref|NP_634903.1| - 6.1e-22 77.7 0.6 4.3e-06 27.2 0.0 5.0 4 1 1 5 5 4 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21228981|ref|NP_634903.1| - 2.3e-17 61.9 2.9 0.046 14.3 0.0 7.6 4 2 4 8 8 8 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21228981|ref|NP_634903.1| - 1.2e-13 50.0 7.4 0.11 12.7 0.0 8.2 7 5 0 7 7 6 3 Tetratricopeptide repeat MIT PF04212.13 gi|21228981|ref|NP_634903.1| - 9.2e-12 44.6 14.1 0.25 11.2 0.1 6.9 5 2 1 7 7 7 4 MIT (microtubule interacting and transport) domain SNAP PF14938.1 gi|21228981|ref|NP_634903.1| - 1.4e-11 44.1 0.0 0.00033 19.9 0.0 3.2 2 1 0 3 3 3 2 Soluble NSF attachment protein, SNAP TPR_19 PF14559.1 gi|21228981|ref|NP_634903.1| - 2e-10 40.8 12.4 0.018 15.3 0.5 6.3 1 1 7 8 8 8 5 Tetratricopeptide repeat 14-3-3 PF00244.15 gi|21228981|ref|NP_634903.1| - 3.4e-10 39.4 0.9 0.0056 15.7 0.0 4.0 3 1 1 4 4 4 2 14-3-3 protein Apc3 PF12895.2 gi|21228981|ref|NP_634903.1| - 8.5e-09 35.4 4.8 0.014 15.5 0.3 4.5 1 1 3 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_5 PF12688.2 gi|21228981|ref|NP_634903.1| - 5.6e-08 32.8 3.0 0.022 14.8 0.0 4.6 4 2 0 4 4 4 2 Tetratrico peptide repeat TPR_6 PF13174.1 gi|21228981|ref|NP_634903.1| - 1.2e-07 31.7 10.7 5 7.8 0.0 7.0 7 2 0 7 7 6 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|21228981|ref|NP_634903.1| - 7.2e-07 28.3 3.5 5.7 6.2 0.0 6.9 7 0 0 7 7 7 0 SHNi-TPR DUF2225 PF09986.4 gi|21228981|ref|NP_634903.1| - 1.6e-06 27.7 4.9 0.018 14.4 0.0 3.5 1 1 2 3 3 3 3 Uncharacterized protein conserved in bacteria (DUF2225) TPR_9 PF13371.1 gi|21228981|ref|NP_634903.1| - 2.9e-06 27.0 0.2 0.18 11.6 0.0 4.7 3 2 1 4 4 4 1 Tetratricopeptide repeat RPN7 PF10602.4 gi|21228981|ref|NP_634903.1| - 4.3e-06 26.2 2.7 1.4 8.2 0.0 5.0 2 2 3 5 5 5 1 26S proteasome subunit RPN7 SPO22 PF08631.5 gi|21228981|ref|NP_634903.1| - 6.8e-05 22.0 2.4 0.0074 15.3 0.3 2.9 2 1 1 3 3 3 2 Meiosis protein SPO22/ZIP4 like Tcf25 PF04910.9 gi|21228981|ref|NP_634903.1| - 0.00033 19.7 0.5 9.2 5.1 0.0 4.3 2 1 4 6 6 6 0 Transcriptional repressor TCF25 TPR_3 PF07720.7 gi|21228981|ref|NP_634903.1| - 0.00041 20.0 3.6 14 5.6 0.0 4.9 6 0 0 6 6 5 0 Tetratricopeptide repeat PPR PF01535.15 gi|21228981|ref|NP_634903.1| - 0.0012 18.6 12.0 1.4 9.0 0.0 7.2 9 0 0 9 9 7 1 PPR repeat TPR_15 PF13429.1 gi|21228981|ref|NP_634903.1| - 0.0014 17.7 3.3 0.14 11.2 0.6 4.0 4 1 0 4 4 4 1 Tetratricopeptide repeat DUF4404 PF14357.1 gi|21228981|ref|NP_634903.1| - 0.0063 16.8 0.1 40 4.7 0.0 4.4 4 1 0 4 4 4 0 Domain of unknown function (DUF4404) Vps39_1 PF10366.4 gi|21228981|ref|NP_634903.1| - 0.0083 16.1 6.0 1.1 9.3 0.0 4.6 3 1 2 5 5 5 1 Vacuolar sorting protein 39 domain 1 HHH_8 PF14716.1 gi|21228981|ref|NP_634903.1| - 0.009 16.1 2.9 32 4.8 0.0 4.9 6 0 0 6 6 5 0 Helix-hairpin-helix domain RecO_C PF02565.10 gi|21228981|ref|NP_634903.1| - 0.028 14.2 0.1 0.13 12.0 0.1 2.3 1 1 0 1 1 1 0 Recombination protein O C terminal TPR_20 PF14561.1 gi|21228981|ref|NP_634903.1| - 0.029 14.4 0.3 16 5.7 0.0 3.5 4 1 0 4 4 2 0 Tetratricopeptide repeat TPR_21 PF09976.4 gi|21228981|ref|NP_634903.1| - 0.057 13.3 1.2 0.91 9.4 0.3 3.1 3 1 1 4 4 3 0 Tetratricopeptide repeat Glucosaminidase PF01832.15 gi|21228981|ref|NP_634903.1| - 0.06 13.4 0.1 0.4 10.8 0.0 2.4 3 0 0 3 3 2 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PPR_3 PF13812.1 gi|21228981|ref|NP_634903.1| - 0.075 13.3 0.5 17 5.9 0.0 4.0 4 0 0 4 4 3 0 Pentatricopeptide repeat domain HDOD PF08668.7 gi|21228981|ref|NP_634903.1| - 0.17 11.1 0.3 1.1 8.4 0.1 2.4 3 1 1 4 4 4 0 HDOD domain USP8_dimer PF08969.6 gi|21228981|ref|NP_634903.1| - 0.21 11.5 4.6 4.7 7.2 0.2 4.1 2 2 2 5 5 5 0 USP8 dimerisation domain Sec5 PF15469.1 gi|21228981|ref|NP_634903.1| - 0.26 11.0 1.3 9.5 5.9 0.0 3.6 2 1 1 3 3 3 0 Exocyst complex component Sec5 Response_reg PF00072.19 gi|21228982|ref|NP_634904.1| - 4.9e-29 100.5 0.1 5.6e-29 100.4 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|21228983|ref|NP_634905.1| - 4.2e-38 129.7 2.4 4e-18 65.4 0.5 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.21 gi|21228983|ref|NP_634905.1| - 7.2e-33 112.6 0.2 1.4e-32 111.7 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21228983|ref|NP_634905.1| - 8.5e-19 67.3 0.0 2.5e-18 65.8 0.0 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.1 gi|21228983|ref|NP_634905.1| - 2.4e-15 55.7 0.0 7.7e-07 28.7 0.0 2.9 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.1 gi|21228983|ref|NP_634905.1| - 4.1e-13 49.6 0.0 5.4e-05 23.5 0.0 2.8 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|21228983|ref|NP_634905.1| - 3.3e-11 42.9 0.0 1.1e-05 25.1 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|21228983|ref|NP_634905.1| - 4.3e-05 23.5 0.0 0.17 11.9 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|21228983|ref|NP_634905.1| - 9.6e-05 22.3 0.1 0.51 10.3 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|21228983|ref|NP_634905.1| - 0.00023 21.2 0.0 0.0054 16.8 0.0 2.9 3 0 0 3 3 3 1 PAS fold HATPase_c_3 PF13589.1 gi|21228983|ref|NP_634905.1| - 0.043 13.4 0.0 0.093 12.3 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TaqI_C PF12950.2 gi|21228984|ref|NP_634906.1| - 2.6e-05 23.9 0.6 7.1e-05 22.5 0.4 1.8 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain DUF72 PF01904.13 gi|21228985|ref|NP_634907.1| - 3.4e-44 151.3 0.3 4.1e-44 151.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 SmpA_OmlA PF04355.8 gi|21228985|ref|NP_634907.1| - 1.1 8.9 3.4 0.5 10.0 0.2 2.0 2 0 0 2 2 2 0 SmpA / OmlA family TrkA_N PF02254.13 gi|21228986|ref|NP_634908.1| - 0.03 14.3 0.0 0.05 13.6 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain NAD_binding_10 PF13460.1 gi|21228986|ref|NP_634908.1| - 0.2 11.6 0.0 0.31 11.0 0.0 1.2 1 0 0 1 1 1 0 NADH(P)-binding Peptidase_M23 PF01551.17 gi|21228987|ref|NP_634909.1| - 2.7e-24 85.0 0.0 4.1e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M23 HisKA_2 PF07568.7 gi|21228988|ref|NP_634910.1| - 1.3e-32 111.4 1.5 3.3e-32 110.1 1.0 1.8 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.21 gi|21228988|ref|NP_634910.1| - 3e-12 46.2 0.4 1.3e-11 44.2 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|21228988|ref|NP_634910.1| - 1.1e-10 41.5 0.0 1.4e-08 34.7 0.0 2.5 2 0 0 2 2 2 1 PAS fold GAF_3 PF13492.1 gi|21228988|ref|NP_634910.1| - 1.8e-07 31.2 0.0 6.8e-07 29.4 0.0 2.0 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.1 gi|21228988|ref|NP_634910.1| - 2.1e-07 31.5 0.0 4.1e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS PF00989.19 gi|21228988|ref|NP_634910.1| - 5.4e-07 29.3 0.0 5.4e-05 22.9 0.0 3.3 3 0 0 3 3 3 1 PAS fold PAS_9 PF13426.1 gi|21228988|ref|NP_634910.1| - 9.8e-07 29.1 0.0 2.4e-05 24.6 0.0 2.9 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.9 gi|21228988|ref|NP_634910.1| - 0.00028 21.2 0.7 0.00056 20.2 0.1 1.9 2 0 0 2 2 1 1 HWE histidine kinase GAF PF01590.21 gi|21228988|ref|NP_634910.1| - 0.00029 20.9 0.0 0.00046 20.3 0.0 1.3 1 0 0 1 1 1 1 GAF domain HATPase_c_2 PF13581.1 gi|21228988|ref|NP_634910.1| - 0.00079 19.2 0.0 0.0017 18.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_8 PF13188.1 gi|21228988|ref|NP_634910.1| - 0.075 12.9 0.0 6.7 6.7 0.0 2.8 2 0 0 2 2 2 0 PAS domain HhH-GPD PF00730.20 gi|21228990|ref|NP_634912.1| - 1.4e-14 54.2 0.0 1.9e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|21228990|ref|NP_634912.1| - 7.8e-06 25.3 0.0 1.8e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|21228990|ref|NP_634912.1| - 0.026 14.6 0.0 0.048 13.8 0.0 1.5 1 1 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.2 gi|21228990|ref|NP_634912.1| - 0.089 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif PsiE PF06146.7 gi|21228991|ref|NP_634913.1| - 1.8e-10 40.8 5.6 1.8e-10 40.8 3.9 1.9 2 0 0 2 2 2 1 Phosphate-starvation-inducible E Phage_Coat_Gp8 PF05371.7 gi|21228991|ref|NP_634913.1| - 0.23 11.0 1.0 0.79 9.3 0.2 2.2 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF4245 PF14030.1 gi|21228991|ref|NP_634913.1| - 0.46 10.2 2.3 1 9.1 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF4245) YlaC PF10777.4 gi|21228991|ref|NP_634913.1| - 5.8 6.4 8.8 1 8.9 0.6 2.1 1 1 1 2 2 2 0 Inner membrane protein YlaC Oxysterol_BP PF01237.13 gi|21228992|ref|NP_634914.1| - 0.0087 14.5 4.8 0.0099 14.3 3.3 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Peptidase_S49_N PF08496.5 gi|21228992|ref|NP_634914.1| - 0.16 11.7 2.3 0.13 12.0 1.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Vac_ImportDeg PF09783.4 gi|21228992|ref|NP_634914.1| - 0.22 10.9 2.1 0.23 10.9 1.4 1.0 1 0 0 1 1 1 0 Vacuolar import and degradation protein Phage_CRI PF05144.9 gi|21228992|ref|NP_634914.1| - 0.5 9.4 3.1 0.54 9.3 2.1 1.0 1 0 0 1 1 1 0 Phage replication protein CRI DUF2951 PF11166.3 gi|21228992|ref|NP_634914.1| - 1 9.2 5.6 1.1 9.1 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) FtsX PF02687.16 gi|21228993|ref|NP_634915.1| - 1.6e-19 69.8 13.1 2.6e-19 69.1 9.1 1.3 1 0 0 1 1 1 1 FtsX-like permease family MacB_PCD PF12704.2 gi|21228993|ref|NP_634915.1| - 8.6e-16 58.2 0.0 8.6e-16 58.2 0.0 3.2 3 1 0 3 3 3 2 MacB-like periplasmic core domain K1 PF02960.9 gi|21228993|ref|NP_634915.1| - 0.087 12.8 2.0 0.66 10.0 1.7 2.1 2 1 0 2 2 2 0 K1 glycoprotein DUF2207 PF09972.4 gi|21228993|ref|NP_634915.1| - 0.33 9.4 6.9 13 4.2 4.8 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MacB_PCD PF12704.2 gi|21228994|ref|NP_634916.1| - 4e-21 75.6 0.2 6.5e-21 74.9 0.1 1.3 1 1 0 1 1 1 1 MacB-like periplasmic core domain NPCBM_assoc PF10633.4 gi|21228995|ref|NP_634917.1| - 2.9e-10 40.0 0.0 0.00065 19.6 0.0 4.6 4 1 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|21228995|ref|NP_634917.1| - 2.8e-09 36.9 6.4 0.024 14.7 0.2 4.2 2 1 2 4 4 4 3 CARDB DUF11 PF01345.13 gi|21228995|ref|NP_634917.1| - 3.2e-07 30.3 0.2 0.055 13.5 0.1 3.6 3 0 0 3 3 3 2 Domain of unknown function DUF11 Y_Y_Y PF07495.8 gi|21228995|ref|NP_634917.1| - 0.013 15.2 3.1 11 5.9 0.0 4.1 3 1 1 4 4 4 0 Y_Y_Y domain DUF2393 PF09624.5 gi|21228995|ref|NP_634917.1| - 0.035 13.6 5.5 0.47 9.9 0.0 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF2393) A2M_N PF01835.14 gi|21228995|ref|NP_634917.1| - 0.11 12.7 0.1 2.5 8.4 0.0 2.8 2 0 0 2 2 2 0 MG2 domain ABC_tran PF00005.22 gi|21228996|ref|NP_634918.1| - 1.5e-33 115.9 0.1 2.7e-33 115.1 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21228996|ref|NP_634918.1| - 9.1e-09 35.6 0.2 0.00059 19.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21228996|ref|NP_634918.1| - 7e-06 25.4 0.7 3.5e-05 23.1 0.5 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|21228996|ref|NP_634918.1| - 2.9e-05 23.6 0.6 0.0048 16.3 0.4 2.2 1 1 1 2 2 2 2 AAA-like domain AAA_16 PF13191.1 gi|21228996|ref|NP_634918.1| - 0.00013 21.9 0.3 0.00035 20.5 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|21228996|ref|NP_634918.1| - 0.00015 21.2 0.0 0.00032 20.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|21228996|ref|NP_634918.1| - 0.00051 19.5 0.1 0.034 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|21228996|ref|NP_634918.1| - 0.0012 18.0 0.1 0.0036 16.5 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|21228996|ref|NP_634918.1| - 0.0037 16.3 0.1 1.1 8.1 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|21228996|ref|NP_634918.1| - 0.0043 17.2 1.6 0.075 13.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|21228996|ref|NP_634918.1| - 0.0044 17.8 0.2 0.0084 16.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|21228996|ref|NP_634918.1| - 0.013 15.8 0.1 0.048 13.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|21228996|ref|NP_634918.1| - 0.015 14.8 0.2 0.043 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.1 gi|21228996|ref|NP_634918.1| - 0.097 11.1 0.0 1.7 7.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.20 gi|21228996|ref|NP_634918.1| - 0.17 11.3 0.2 8.1 5.8 0.1 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_18 PF13238.1 gi|21228996|ref|NP_634918.1| - 0.32 11.3 2.1 2 8.6 1.4 2.2 1 1 0 1 1 1 0 AAA domain HTH_3 PF01381.17 gi|21228997|ref|NP_634919.1| - 3.1e-14 52.5 0.1 3.5e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|21228997|ref|NP_634919.1| - 1e-10 41.6 0.1 1.2e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|21228997|ref|NP_634919.1| - 1.7e-09 37.5 0.1 1.9e-09 37.4 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21228997|ref|NP_634919.1| - 5.4e-07 29.7 0.1 6.1e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|21228997|ref|NP_634919.1| - 0.003 17.3 0.0 0.0034 17.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|21228997|ref|NP_634919.1| - 0.0044 16.7 0.1 0.0081 15.9 0.0 1.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_25 PF13413.1 gi|21228997|ref|NP_634919.1| - 0.011 15.3 0.1 0.016 14.8 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain MRF_C1 PF13887.1 gi|21228997|ref|NP_634919.1| - 0.04 12.9 0.7 0.079 12.0 0.1 1.8 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 PIG-Y PF15159.1 gi|21228998|ref|NP_634920.1| - 0.034 14.3 0.8 0.034 14.3 0.5 2.2 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y PhaG_MnhG_YufB PF03334.9 gi|21228998|ref|NP_634920.1| - 0.048 13.7 3.1 0.073 13.1 2.2 1.3 1 0 0 1 1 1 0 Na+/H+ antiporter subunit Na_Ca_ex PF01699.19 gi|21228998|ref|NP_634920.1| - 0.12 12.0 4.1 0.14 11.7 2.8 1.1 1 0 0 1 1 1 0 Sodium/calcium exchanger protein EcsB PF05975.7 gi|21228998|ref|NP_634920.1| - 0.24 9.8 8.4 0.38 9.1 5.8 1.3 1 1 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF4190 PF13828.1 gi|21228998|ref|NP_634920.1| - 0.39 10.3 2.7 0.57 9.7 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) Polysacc_synt PF01943.12 gi|21228998|ref|NP_634920.1| - 1.1 8.5 12.0 0.098 11.9 3.1 1.9 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein DUF4389 PF14333.1 gi|21228998|ref|NP_634920.1| - 1.1 8.9 6.8 7.5 6.3 2.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF1189 PF06691.6 gi|21228998|ref|NP_634920.1| - 2.4 7.3 6.9 7.2 5.8 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) Peptidase_A24 PF01478.13 gi|21228998|ref|NP_634920.1| - 2.7 8.1 8.1 0.3 11.2 1.7 1.8 1 1 1 2 2 2 0 Type IV leader peptidase family TraS PF10624.4 gi|21228998|ref|NP_634920.1| - 2.8 7.4 7.7 0.8 9.2 3.2 1.5 2 0 0 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS Orai-1 PF07856.7 gi|21228998|ref|NP_634920.1| - 5.2 6.6 8.5 1.4 8.4 2.8 1.9 1 1 1 2 2 2 0 Mediator of CRAC channel activity Pirin_C PF05726.8 gi|21228999|ref|NP_634921.1| - 1.4e-38 131.1 0.0 2.8e-37 126.9 0.0 2.1 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin PF02678.11 gi|21228999|ref|NP_634921.1| - 2e-37 127.2 0.2 3.3e-37 126.6 0.1 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.6 gi|21228999|ref|NP_634921.1| - 1.1e-05 24.8 3.9 0.0099 15.3 0.2 3.5 2 1 1 3 3 3 2 Cupin domain AraC_binding PF02311.14 gi|21228999|ref|NP_634921.1| - 0.019 14.6 2.1 3.5 7.3 0.1 3.0 2 1 0 2 2 2 0 AraC-like ligand binding domain DDE_Tnp_1_6 PF13751.1 gi|21229000|ref|NP_634922.1| - 0.00091 19.2 0.2 0.0013 18.7 0.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|21229000|ref|NP_634922.1| - 0.0086 15.6 1.5 0.012 15.2 1.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain PcfK PF14058.1 gi|21229000|ref|NP_634922.1| - 0.068 13.3 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 PcfK-like protein DUF2405 PF10293.4 gi|21229000|ref|NP_634922.1| - 0.1 12.3 0.2 0.14 11.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) HMG_box PF00505.14 gi|21229002|ref|NP_634924.1| - 0.17 12.1 1.6 8 6.8 0.3 2.8 2 1 1 3 3 3 0 HMG (high mobility group) box HTH_29 PF13551.1 gi|21229003|ref|NP_634925.1| - 2.7e-25 88.6 0.1 1.1e-24 86.7 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21229003|ref|NP_634925.1| - 1.2e-10 41.9 0.1 6.1e-09 36.5 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21229003|ref|NP_634925.1| - 9.3e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|21229003|ref|NP_634925.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|21229003|ref|NP_634925.1| - 0.04 13.9 0.0 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|21229003|ref|NP_634925.1| - 0.051 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21229003|ref|NP_634925.1| - 0.15 11.7 0.8 0.59 9.8 0.1 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DDE_3 PF13358.1 gi|21229004|ref|NP_634926.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease DUF772 PF05598.6 gi|21229005|ref|NP_634927.1| - 6.6e-15 54.7 0.0 1.3e-14 53.7 0.0 1.6 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.16 gi|21229005|ref|NP_634927.1| - 0.0021 17.6 1.0 0.0095 15.4 0.1 2.0 1 1 1 2 2 2 1 Transposase DDE domain DUF3500 PF12006.3 gi|21229005|ref|NP_634927.1| - 0.019 13.9 0.3 0.033 13.1 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3500) DUF4404 PF14357.1 gi|21229005|ref|NP_634927.1| - 0.54 10.7 2.9 0.38 11.1 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DUF445 PF04286.7 gi|21229005|ref|NP_634927.1| - 0.64 9.4 8.6 1.1 8.7 5.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF445) DDE_3 PF13358.1 gi|21229006|ref|NP_634928.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease HTH_29 PF13551.1 gi|21229007|ref|NP_634929.1| - 2.7e-25 88.6 0.1 1.1e-24 86.7 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21229007|ref|NP_634929.1| - 1.2e-10 41.9 0.1 6.1e-09 36.5 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21229007|ref|NP_634929.1| - 9.3e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|21229007|ref|NP_634929.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|21229007|ref|NP_634929.1| - 0.04 13.9 0.0 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|21229007|ref|NP_634929.1| - 0.051 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21229007|ref|NP_634929.1| - 0.15 11.7 0.8 0.59 9.8 0.1 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB Y1_Tnp PF01797.11 gi|21229008|ref|NP_634930.1| - 3.6e-38 130.1 1.2 4.5e-38 129.8 0.9 1.1 1 0 0 1 1 1 1 Transposase IS200 like Pirin_C PF05726.8 gi|21229009|ref|NP_634931.1| - 1.7e-38 130.8 0.0 5.6e-37 125.9 0.0 2.3 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Pirin PF02678.11 gi|21229009|ref|NP_634931.1| - 7.1e-37 125.5 0.2 1.1e-36 124.9 0.1 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.6 gi|21229009|ref|NP_634931.1| - 0.0014 18.0 3.1 0.027 13.9 0.1 3.1 3 0 0 3 3 3 1 Cupin domain DUF2121 PF09894.4 gi|21229011|ref|NP_634933.1| - 1.9e-78 262.2 5.8 2.1e-78 262.0 4.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) Proteasome PF00227.21 gi|21229011|ref|NP_634933.1| - 0.0017 17.6 0.1 0.15 11.3 0.0 2.5 2 0 0 2 2 2 2 Proteasome subunit Adenine_deam_C PF13382.1 gi|21229012|ref|NP_634934.1| - 1.4e-59 200.0 0.0 2.3e-59 199.3 0.0 1.3 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|21229012|ref|NP_634934.1| - 1.5e-27 97.1 0.0 2.2e-26 93.3 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|21229012|ref|NP_634934.1| - 3.6e-11 43.6 0.0 0.00018 21.6 0.0 2.3 1 1 1 2 2 2 2 Amidohydrolase Amidohydro_5 PF13594.1 gi|21229012|ref|NP_634934.1| - 6.1e-08 32.3 0.3 1.8e-07 30.8 0.2 1.8 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|21229012|ref|NP_634934.1| - 0.026 13.7 0.0 4.7 6.3 0.0 2.2 2 0 0 2 2 2 0 Amidohydrolase family Aminotran_5 PF00266.14 gi|21229013|ref|NP_634935.1| - 2.3e-07 29.8 0.0 2.7e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V HNH_3 PF13392.1 gi|21229013|ref|NP_634935.1| - 0.0048 16.2 0.0 0.056 12.8 0.0 2.2 2 0 0 2 2 2 1 HNH endonuclease Hydantoinase_B PF02538.9 gi|21229014|ref|NP_634936.1| - 5.3e-207 688.2 0.0 7.4e-207 687.7 0.0 1.1 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.13 gi|21229014|ref|NP_634936.1| - 4.2e-128 426.4 0.3 1.4e-127 424.8 0.2 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.8 gi|21229014|ref|NP_634936.1| - 1.2e-61 207.3 0.1 7.6e-60 201.4 0.0 2.9 4 0 0 4 4 4 1 Hydantoinase/oxoprolinase N-terminal region DUF1297 PF06973.7 gi|21229015|ref|NP_634937.1| - 2.5e-60 203.0 0.0 3.3e-60 202.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.7 gi|21229015|ref|NP_634937.1| - 5.5e-42 142.4 0.0 1.1e-41 141.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.12 gi|21229015|ref|NP_634937.1| - 0.039 13.2 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.1 gi|21229015|ref|NP_634937.1| - 0.043 13.5 0.0 9.8 5.8 0.0 2.3 2 0 0 2 2 2 0 ATP-grasp domain Big_5 PF13205.1 gi|21229016|ref|NP_634938.1| - 1.3e-05 25.7 0.0 1.8e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain HDOD PF08668.7 gi|21229017|ref|NP_634939.1| - 0.00097 18.4 0.1 0.27 10.4 0.0 2.2 1 1 1 2 2 2 2 HDOD domain DUF1279 PF06916.8 gi|21229017|ref|NP_634939.1| - 0.03 14.6 3.7 1 9.6 0.1 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF1279) YopD PF05844.7 gi|21229017|ref|NP_634939.1| - 0.053 12.5 0.1 0.084 11.8 0.1 1.3 1 0 0 1 1 1 0 YopD protein DUF3042 PF11240.3 gi|21229017|ref|NP_634939.1| - 0.18 11.6 2.3 0.47 10.2 1.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) COX14 PF14880.1 gi|21229017|ref|NP_634939.1| - 0.24 11.0 2.7 0.18 11.4 0.3 1.9 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Flavin_Reduct PF01613.13 gi|21229018|ref|NP_634940.1| - 1e-28 100.1 0.0 1.2e-28 99.8 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Aldo_ket_red PF00248.16 gi|21229019|ref|NP_634941.1| - 3e-43 147.6 0.0 4.1e-43 147.2 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|21229019|ref|NP_634941.1| - 9e-13 48.3 7.6 1.8e-12 47.3 5.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229019|ref|NP_634941.1| - 2e-09 37.5 9.6 3.8e-09 36.6 6.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229019|ref|NP_634941.1| - 1.3e-08 35.0 2.4 0.00025 21.3 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21229019|ref|NP_634941.1| - 2e-07 30.9 7.2 3.5e-07 30.1 5.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|21229019|ref|NP_634941.1| - 5.9e-07 29.1 1.9 1.5e-05 24.5 0.1 2.3 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_10 PF13237.1 gi|21229019|ref|NP_634941.1| - 1.2e-05 25.0 8.2 3.8e-05 23.3 5.8 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21229019|ref|NP_634941.1| - 9.1e-05 23.1 4.1 0.025 15.3 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21229019|ref|NP_634941.1| - 0.00013 21.7 6.1 0.072 12.9 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21229019|ref|NP_634941.1| - 0.00052 19.5 11.1 0.00098 18.6 2.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229019|ref|NP_634941.1| - 0.035 13.9 1.7 0.035 13.9 1.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21229019|ref|NP_634941.1| - 0.078 13.3 16.1 0.25 11.7 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain PA_decarbox PF05870.6 gi|21229019|ref|NP_634941.1| - 0.099 12.1 0.1 11 5.4 0.0 2.5 3 0 0 3 3 3 0 Phenolic acid decarboxylase (PAD) Dynein_light PF01221.13 gi|21229019|ref|NP_634941.1| - 0.11 12.5 0.2 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Dynein light chain type 1 Fer4_7 PF12838.2 gi|21229019|ref|NP_634941.1| - 0.23 11.8 15.3 0.37 11.2 3.3 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229019|ref|NP_634941.1| - 0.41 10.6 16.0 0.15 12.0 2.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21229019|ref|NP_634941.1| - 1.5 9.6 15.7 0.11 13.1 3.2 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21229019|ref|NP_634941.1| - 2 9.0 7.0 2 9.0 0.6 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Aldo_ket_red PF00248.16 gi|21229020|ref|NP_634942.1| - 2.3e-45 154.6 0.0 3.2e-45 154.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|21229020|ref|NP_634942.1| - 1.1e-12 48.1 8.1 2.3e-12 47.0 5.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229020|ref|NP_634942.1| - 1.2e-06 28.7 8.2 2.2e-06 27.8 5.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21229020|ref|NP_634942.1| - 5.3e-06 26.3 7.4 1.1e-05 25.3 5.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229020|ref|NP_634942.1| - 7.6e-05 23.0 2.9 0.028 14.8 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|21229020|ref|NP_634942.1| - 0.00022 20.8 0.2 0.00022 20.8 0.1 1.9 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.1 gi|21229020|ref|NP_634942.1| - 0.0027 18.4 5.0 0.065 13.9 0.3 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|21229020|ref|NP_634942.1| - 0.0053 16.5 7.3 0.65 9.8 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21229020|ref|NP_634942.1| - 0.0056 16.2 9.9 0.01 15.3 1.3 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21229020|ref|NP_634942.1| - 0.0084 15.8 12.8 0.015 15.0 1.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21229020|ref|NP_634942.1| - 0.28 11.6 14.1 0.45 10.9 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21229020|ref|NP_634942.1| - 0.32 11.0 14.1 0.13 12.2 2.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Med27 PF11571.3 gi|21229020|ref|NP_634942.1| - 0.76 9.9 4.3 0.44 10.7 0.1 2.3 2 0 0 2 2 2 0 Mediator complex subunit 27 Fer4_7 PF12838.2 gi|21229020|ref|NP_634942.1| - 0.84 10.0 13.0 0.54 10.6 2.3 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229020|ref|NP_634942.1| - 0.98 10.0 4.8 2.6 8.6 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain CMD PF02627.15 gi|21229021|ref|NP_634943.1| - 3.7e-13 49.1 0.0 4.4e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Acetyltransf_3 PF13302.1 gi|21229022|ref|NP_634944.1| - 1.3e-18 67.4 0.0 1.5e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21229022|ref|NP_634944.1| - 9.8e-09 35.1 0.0 1.2e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21229022|ref|NP_634944.1| - 0.00091 19.3 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|21229022|ref|NP_634944.1| - 0.017 15.0 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Cbl_N3 PF02762.9 gi|21229022|ref|NP_634944.1| - 0.02 14.4 0.0 0.035 13.7 0.0 1.4 1 1 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain FR47 PF08445.5 gi|21229022|ref|NP_634944.1| - 0.026 14.2 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Cytochrom_D1 PF02239.11 gi|21229025|ref|NP_634947.1| - 1.1e-13 50.2 8.3 0.00015 20.1 0.8 4.3 2 1 2 4 4 4 4 Cytochrome D1 heme domain Lactonase PF10282.4 gi|21229025|ref|NP_634947.1| - 3.1e-13 49.5 6.9 1.6e-06 27.4 0.2 4.2 1 1 2 4 4 4 3 Lactonase, 7-bladed beta-propeller NHL PF01436.16 gi|21229025|ref|NP_634947.1| - 2.6e-07 30.2 13.6 2 8.5 0.0 7.3 7 0 0 7 7 7 4 NHL repeat SBP56 PF05694.6 gi|21229025|ref|NP_634947.1| - 5.6e-07 28.4 0.3 0.64 8.4 0.0 5.0 1 1 4 5 5 5 3 56kDa selenium binding protein (SBP56) PD40 PF07676.7 gi|21229025|ref|NP_634947.1| - 6.1e-07 28.9 15.9 1.6 8.4 0.0 9.4 9 0 0 9 9 9 3 WD40-like Beta Propeller Repeat Arylesterase PF01731.15 gi|21229025|ref|NP_634947.1| - 0.00023 21.1 9.1 23 5.0 0.0 6.0 5 1 1 6 6 6 1 Arylesterase Virul_fac_BrkB PF03631.10 gi|21229026|ref|NP_634948.1| - 2.3e-51 174.6 19.1 2.8e-51 174.3 13.3 1.0 1 0 0 1 1 1 1 Virulence factor BrkB DUF456 PF04306.8 gi|21229026|ref|NP_634948.1| - 8.8 6.3 16.9 0.045 13.7 1.8 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF456) Polysacc_synt PF01943.12 gi|21229029|ref|NP_634951.1| - 2.9e-33 115.3 39.0 4.1e-33 114.8 15.7 2.5 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.1 gi|21229029|ref|NP_634951.1| - 2.3e-17 63.1 40.4 8.4e-17 61.3 8.6 3.7 3 1 0 3 3 3 3 Polysaccharide biosynthesis C-terminal domain Polysacc_synt_3 PF13440.1 gi|21229029|ref|NP_634951.1| - 9.4e-16 58.0 17.9 9.4e-16 58.0 12.4 3.1 3 0 0 3 3 3 1 Polysaccharide biosynthesis protein MatE PF01554.13 gi|21229029|ref|NP_634951.1| - 4.2e-13 49.2 32.1 2.2e-09 37.1 9.1 3.0 3 0 0 3 3 3 2 MatE MVIN PF03023.9 gi|21229029|ref|NP_634951.1| - 7.7e-06 24.5 31.0 1.4e-05 23.7 21.5 1.3 1 0 0 1 1 1 1 MviN-like protein zf-ribbon_3 PF13248.1 gi|21229030|ref|NP_634952.1| - 4.6e-12 44.7 28.0 1.7e-07 30.2 2.3 3.3 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.2 gi|21229030|ref|NP_634952.1| - 3.2e-10 39.6 12.5 3.2e-10 39.6 8.7 2.9 1 1 2 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21229030|ref|NP_634952.1| - 1.2e-08 34.1 32.9 6.6e-07 28.6 3.8 4.4 4 1 1 5 5 5 3 zinc-ribbon domain UPF0547 PF10571.4 gi|21229030|ref|NP_634952.1| - 1.6e-05 24.4 1.5 1.6e-05 24.4 1.1 4.4 4 1 0 4 4 4 1 Uncharacterised protein family UPF0547 zf-NADH-PPase PF09297.6 gi|21229030|ref|NP_634952.1| - 0.0012 18.3 21.6 0.19 11.2 0.2 5.2 4 1 0 4 4 4 2 NADH pyrophosphatase zinc ribbon domain zinc-ribbons_6 PF07191.7 gi|21229030|ref|NP_634952.1| - 0.027 14.2 15.7 0.66 9.8 3.1 3.2 2 1 1 3 3 3 0 zinc-ribbons Ribosomal_L32p PF01783.18 gi|21229030|ref|NP_634952.1| - 0.094 12.9 12.3 6.1 7.1 0.5 3.4 2 1 1 3 3 3 0 Ribosomal L32p protein family PolC_DP2 PF03833.8 gi|21229030|ref|NP_634952.1| - 0.38 8.3 13.3 0.012 13.3 4.3 1.8 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.1 gi|21229030|ref|NP_634952.1| - 0.44 10.2 0.1 0.44 10.2 0.1 5.4 5 1 0 5 5 5 0 Nudix N-terminal zf-B_box PF00643.19 gi|21229030|ref|NP_634952.1| - 0.9 9.4 19.9 1.3 8.9 0.3 4.2 3 1 1 4 4 4 0 B-box zinc finger tRNA-synt_1g PF09334.6 gi|21229030|ref|NP_634952.1| - 1.7 7.2 4.9 0.43 9.1 0.8 1.9 1 1 0 1 1 1 0 tRNA synthetases class I (M) PHF5 PF03660.9 gi|21229030|ref|NP_634952.1| - 3.6 7.7 13.3 0.49 10.4 3.0 2.1 1 1 1 2 2 2 0 PHF5-like protein zinc_ribbon_5 PF13719.1 gi|21229030|ref|NP_634952.1| - 4.6 6.9 16.7 2.8 7.5 0.0 4.8 4 1 1 5 5 5 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|21229030|ref|NP_634952.1| - 5.2 6.8 16.6 4.2 7.1 0.0 4.9 4 1 1 5 5 5 0 zinc-ribbon domain GFA PF04828.9 gi|21229030|ref|NP_634952.1| - 6.2 6.8 21.9 55 3.7 2.1 4.8 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme OrfB_Zn_ribbon PF07282.6 gi|21229030|ref|NP_634952.1| - 7 6.3 20.9 4.4 7.0 0.5 3.6 2 1 1 3 3 3 0 Putative transposase DNA-binding domain DUF2116 PF09889.4 gi|21229030|ref|NP_634952.1| - 9.1 6.1 8.5 3.7 7.4 0.7 3.0 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-ribbon_3 PF13248.1 gi|21229031|ref|NP_634953.1| - 3.8e-13 48.1 38.6 9.6e-05 21.4 2.2 5.0 5 1 0 5 5 5 4 zinc-ribbon domain DZR PF12773.2 gi|21229031|ref|NP_634953.1| - 1.2e-12 47.4 27.3 9.2e-08 31.7 5.7 3.6 1 1 1 3 3 3 3 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21229031|ref|NP_634953.1| - 2.2e-10 39.6 42.8 0.0008 18.8 2.3 5.4 5 1 0 5 5 5 4 zinc-ribbon domain UPF0547 PF10571.4 gi|21229031|ref|NP_634953.1| - 0.016 14.9 1.5 0.016 14.9 1.0 5.5 5 1 0 5 5 5 0 Uncharacterised protein family UPF0547 zf-P11 PF03854.9 gi|21229031|ref|NP_634953.1| - 0.056 12.9 0.5 0.056 12.9 0.4 4.3 2 1 2 4 4 4 0 P-11 zinc finger Nop10p PF04135.7 gi|21229031|ref|NP_634953.1| - 0.17 11.6 0.4 0.17 11.6 0.3 3.4 2 2 1 3 3 3 0 Nucleolar RNA-binding protein, Nop10p family zf-C3HC4_3 PF13920.1 gi|21229031|ref|NP_634953.1| - 0.18 11.5 30.2 0.15 11.7 0.7 4.5 2 2 2 4 4 4 0 Zinc finger, C3HC4 type (RING finger) zf-C2HC5 PF06221.8 gi|21229031|ref|NP_634953.1| - 0.24 11.1 27.6 3.3 7.5 0.9 4.0 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type PyrI_C PF02748.10 gi|21229031|ref|NP_634953.1| - 0.69 9.4 0.1 0.69 9.4 0.1 4.5 3 1 1 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF1015 PF06245.6 gi|21229032|ref|NP_634954.1| - 3.4e-62 210.2 0.0 4.4e-62 209.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) Rhodanese PF00581.15 gi|21229033|ref|NP_634955.1| - 2.2e-27 95.6 0.1 8e-20 71.2 0.1 2.6 2 0 0 2 2 2 2 Rhodanese-like domain Lactamase_B PF00753.22 gi|21229033|ref|NP_634955.1| - 6.5e-14 52.0 0.1 1.8e-13 50.6 0.1 1.8 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily DUF45 PF01863.12 gi|21229034|ref|NP_634956.1| - 0.013 15.3 0.3 0.019 14.7 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF45 WLM PF08325.5 gi|21229034|ref|NP_634956.1| - 0.033 14.0 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 WLM domain NPCBM_assoc PF10633.4 gi|21229035|ref|NP_634957.1| - 3.1e-13 49.5 1.0 0.00018 21.4 0.1 5.1 5 2 0 5 5 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF916 PF06030.7 gi|21229035|ref|NP_634957.1| - 6.5e-12 45.3 0.4 0.2 11.4 0.0 5.4 5 0 0 5 5 5 4 Bacterial protein of unknown function (DUF916) DUF1034 PF06280.7 gi|21229035|ref|NP_634957.1| - 1.1e-11 45.0 5.0 0.00017 21.9 0.4 4.7 3 2 0 3 3 3 2 Fn3-like domain (DUF1034) FixG_C PF11614.3 gi|21229035|ref|NP_634957.1| - 1.1e-09 38.3 0.7 0.027 14.5 0.0 3.6 3 1 0 3 3 3 3 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4625 PF15418.1 gi|21229035|ref|NP_634957.1| - 6.1e-06 26.3 1.9 0.025 14.6 0.0 3.6 3 0 0 3 3 3 2 Domain of unknown function (DUF4625) DUF11 PF01345.13 gi|21229035|ref|NP_634957.1| - 8.9e-05 22.4 3.1 2 8.5 0.0 4.1 5 0 0 5 5 5 2 Domain of unknown function DUF11 Big_2 PF02368.13 gi|21229035|ref|NP_634957.1| - 0.0057 16.5 0.0 3.5 7.5 0.0 3.8 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 2) BACON PF13004.2 gi|21229035|ref|NP_634957.1| - 0.01 16.0 5.3 1.6 8.9 0.2 4.2 4 0 0 4 4 4 1 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal Imm48 PF15587.1 gi|21229035|ref|NP_634957.1| - 0.023 14.0 0.0 1.4 8.3 0.0 3.0 3 0 0 3 3 3 0 Immunity protein 48 TRAP_alpha PF03896.11 gi|21229035|ref|NP_634957.1| - 0.038 12.9 0.6 0.27 10.1 0.0 2.1 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit Gmad2 PF10648.4 gi|21229035|ref|NP_634957.1| - 0.04 14.0 0.4 17 5.6 0.0 3.4 3 0 0 3 3 3 0 Immunoglobulin-like domain of bacterial spore germination Transglut_N PF00868.15 gi|21229035|ref|NP_634957.1| - 0.12 12.3 0.0 6.7 6.7 0.0 3.6 4 1 0 4 4 4 0 Transglutaminase family BsuPI PF12690.2 gi|21229035|ref|NP_634957.1| - 0.23 11.1 1.8 1.4e+02 2.2 0.0 5.1 6 0 0 6 6 6 0 Intracellular proteinase inhibitor HTH_38 PF13936.1 gi|21229036|ref|NP_634958.1| - 0.00028 20.3 1.6 0.00051 19.5 0.6 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.8 gi|21229036|ref|NP_634958.1| - 0.0017 17.8 8.2 0.0017 17.8 5.7 1.9 2 1 0 2 2 2 1 InsA N-terminal domain HCaRG PF07258.9 gi|21229036|ref|NP_634958.1| - 0.0018 17.8 0.4 0.0022 17.5 0.3 1.2 1 0 0 1 1 1 1 HCaRG protein zf-BED PF02892.10 gi|21229036|ref|NP_634958.1| - 0.01 15.5 1.6 0.026 14.3 1.1 1.6 1 0 0 1 1 1 0 BED zinc finger IBR PF01485.16 gi|21229036|ref|NP_634958.1| - 0.026 14.4 2.0 0.072 12.9 1.4 1.8 1 1 0 1 1 1 0 IBR domain Thioredoxin_4 PF13462.1 gi|21229036|ref|NP_634958.1| - 0.048 13.6 0.1 0.063 13.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin DUF977 PF06163.6 gi|21229036|ref|NP_634958.1| - 0.12 12.1 0.1 0.66 9.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF977) PyrI_C PF02748.10 gi|21229036|ref|NP_634958.1| - 4.6 6.7 7.8 38 3.8 5.4 2.3 1 1 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain UPF0047 PF01894.12 gi|21229037|ref|NP_634959.1| - 1.3e-32 112.0 0.0 1.5e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Y1_Tnp PF01797.11 gi|21229038|ref|NP_634960.1| - 5.7e-27 93.9 0.3 6.5e-27 93.7 0.2 1.0 1 0 0 1 1 1 1 Transposase IS200 like PKD PF00801.15 gi|21229039|ref|NP_634961.1| - 2.8e-52 174.3 27.1 2.3e-16 59.2 0.7 4.6 4 0 0 4 4 4 4 PKD domain Polysacc_deac_1 PF01522.16 gi|21229039|ref|NP_634961.1| - 1.7e-09 37.3 0.1 4.6e-09 35.9 0.0 1.7 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF2334 PF10096.4 gi|21229039|ref|NP_634961.1| - 1.7e-07 30.9 0.5 4e-07 29.7 0.3 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Laminin_G_3 PF13385.1 gi|21229039|ref|NP_634961.1| - 0.0017 18.6 3.0 0.0048 17.1 0.0 3.0 2 1 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily Y_Y_Y PF07495.8 gi|21229039|ref|NP_634961.1| - 0.0019 17.9 6.8 0.38 10.5 0.3 4.0 4 0 0 4 4 4 2 Y_Y_Y domain Disaggr_assoc PF08480.5 gi|21229040|ref|NP_634962.1| - 2.9e-82 274.9 10.4 2.9e-82 274.9 7.2 2.5 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.1 gi|21229040|ref|NP_634962.1| - 3.7e-08 33.2 60.7 1.2e-06 28.3 23.2 3.8 2 1 1 3 3 3 2 Right handed beta helix region Hexapep PF00132.19 gi|21229041|ref|NP_634963.1| - 7.1e-08 31.6 17.3 2.9e-06 26.5 2.6 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21229041|ref|NP_634963.1| - 0.00095 18.6 11.6 0.066 12.7 0.9 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase DUF217 PF02697.9 gi|21229042|ref|NP_634964.1| - 0.016 15.4 0.1 0.046 13.9 0.0 1.8 1 1 1 2 2 2 0 Uncharacterized ACR, COG1753 Lactamase_B_2 PF12706.2 gi|21229043|ref|NP_634965.1| - 1.1e-22 80.5 0.1 1.3e-22 80.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21229043|ref|NP_634965.1| - 6.8e-09 35.6 4.0 3.8e-08 33.2 2.6 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|21229043|ref|NP_634965.1| - 0.0048 16.6 0.0 0.0066 16.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PDEase_II PF02112.10 gi|21229043|ref|NP_634965.1| - 0.05 12.5 0.2 0.098 11.5 0.0 1.5 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II MannoseP_isomer PF01050.13 gi|21229045|ref|NP_634967.1| - 1.1e-32 112.7 0.8 1.1e-32 112.7 0.5 1.7 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase Glycos_transf_1 PF00534.15 gi|21229045|ref|NP_634967.1| - 2.8e-22 78.9 0.1 5.1e-22 78.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21229045|ref|NP_634967.1| - 2.4e-11 43.9 0.0 9e-11 42.0 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Cupin_2 PF07883.6 gi|21229045|ref|NP_634967.1| - 2.2e-09 36.6 0.1 4.6e-09 35.6 0.1 1.6 1 0 0 1 1 1 1 Cupin domain Glyco_transf_4 PF13439.1 gi|21229045|ref|NP_634967.1| - 4.4e-07 29.7 0.4 1.7e-06 27.8 0.1 2.3 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|21229045|ref|NP_634967.1| - 1.5e-05 25.1 0.0 4e-05 23.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|21229045|ref|NP_634967.1| - 0.0026 17.9 0.0 0.0078 16.3 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain DUF377 PF04041.8 gi|21229046|ref|NP_634968.1| - 1.6e-62 211.0 0.0 2e-62 210.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF377) Glycos_transf_1 PF00534.15 gi|21229047|ref|NP_634969.1| - 2.4e-15 56.4 0.1 6.2e-15 55.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21229047|ref|NP_634969.1| - 3.9e-13 49.7 0.0 1e-12 48.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.1 gi|21229047|ref|NP_634969.1| - 3.2e-05 23.7 0.0 8.7e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|21229047|ref|NP_634969.1| - 0.0019 18.4 0.0 0.0058 16.8 0.0 1.8 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_hydro_88 PF07470.8 gi|21229047|ref|NP_634969.1| - 0.0024 16.9 0.2 0.95 8.4 0.1 2.8 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.9 gi|21229047|ref|NP_634969.1| - 0.0029 17.0 0.4 0.0058 16.0 0.1 1.6 1 1 1 2 2 2 1 Glycosyl hydrolase family 76 DUF1680 PF07944.7 gi|21229047|ref|NP_634969.1| - 0.0076 14.5 0.9 0.85 7.8 0.2 2.5 2 1 0 2 2 2 2 Putative glycosyl hydrolase of unknown function (DUF1680) Urease_gamma PF00547.13 gi|21229047|ref|NP_634969.1| - 0.047 13.7 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Urease, gamma subunit Disaggr_repeat PF06848.6 gi|21229048|ref|NP_634970.1| - 2.5e-98 326.8 3.5 4.8e-98 325.9 2.4 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.5 gi|21229048|ref|NP_634970.1| - 1.9e-83 278.8 13.2 1.9e-83 278.8 9.1 3.6 2 1 1 3 3 3 2 Disaggregatase related Beta_helix PF13229.1 gi|21229048|ref|NP_634970.1| - 8.5e-19 67.8 48.4 1.7e-13 50.6 15.7 3.8 1 1 2 3 3 3 3 Right handed beta helix region TGFb_propeptide PF00688.13 gi|21229048|ref|NP_634970.1| - 0.032 13.5 0.0 0.22 10.7 0.0 2.0 2 0 0 2 2 2 0 TGF-beta propeptide Rapsyn_N PF10579.4 gi|21229048|ref|NP_634970.1| - 0.06 13.1 0.0 1.5 8.6 0.0 2.6 3 0 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region Coat_X PF07552.6 gi|21229048|ref|NP_634970.1| - 0.15 11.8 0.6 2.6 7.8 0.1 2.3 2 0 0 2 2 2 0 Spore Coat Protein X and V domain YqhG PF11079.3 gi|21229049|ref|NP_634971.1| - 0.065 12.0 0.9 4.4 6.0 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein YqhG of unknown function DUF1699 PF08004.6 gi|21229050|ref|NP_634972.1| - 6.1e-68 226.3 0.6 6.8e-68 226.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) LKAAEAR PF15478.1 gi|21229050|ref|NP_634972.1| - 0.026 14.8 0.0 0.066 13.4 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function with LKAAEAR motif PAM2 PF07145.10 gi|21229050|ref|NP_634972.1| - 0.083 12.4 0.2 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region NinB PF05772.7 gi|21229051|ref|NP_634973.1| - 0.027 14.1 0.1 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 NinB protein TrmB PF01978.14 gi|21229051|ref|NP_634973.1| - 0.041 13.6 0.0 0.24 11.1 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2551 PF10826.3 gi|21229052|ref|NP_634974.1| - 4.2e-35 119.5 0.7 5e-35 119.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.11 gi|21229052|ref|NP_634974.1| - 0.00018 21.5 0.0 0.00025 21.0 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor Lar_restr_allev PF14354.1 gi|21229053|ref|NP_634975.1| - 0.051 13.8 0.3 0.089 13.1 0.2 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar RNHCP PF12647.2 gi|21229053|ref|NP_634975.1| - 0.11 12.3 0.1 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 RNHCP domain DUF164 PF02591.10 gi|21229053|ref|NP_634975.1| - 0.12 12.2 0.2 0.22 11.3 0.2 1.4 1 0 0 1 1 1 0 Putative zinc ribbon domain PPK2 PF03976.9 gi|21229054|ref|NP_634976.1| - 2.2e-135 449.1 5.3 4.7e-85 284.5 1.4 2.1 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) AAA_18 PF13238.1 gi|21229054|ref|NP_634976.1| - 0.016 15.5 5.8 0.45 10.8 0.2 3.4 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.1 gi|21229054|ref|NP_634976.1| - 0.029 14.2 0.0 0.5 10.2 0.0 2.7 1 1 1 2 2 2 0 AAA domain Response_reg PF00072.19 gi|21229055|ref|NP_634977.1| - 3.1e-24 85.1 0.0 3.9e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|21229056|ref|NP_634978.1| - 1.8e-25 89.0 0.0 2.5e-25 88.6 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain PTS_IIB PF02302.12 gi|21229056|ref|NP_634978.1| - 0.36 11.3 0.1 0.36 11.3 0.0 1.8 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit HisKA_2 PF07568.7 gi|21229057|ref|NP_634979.1| - 9.9e-31 105.4 2.8 5.6e-30 103.0 1.0 2.8 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|21229057|ref|NP_634979.1| - 1.2e-16 60.5 0.4 3.4e-16 59.0 0.1 2.0 2 0 0 2 2 2 1 PAS fold Cache_1 PF02743.13 gi|21229057|ref|NP_634979.1| - 3.8e-13 48.7 0.0 1.9e-12 46.5 0.0 2.1 2 0 0 2 2 2 1 Cache domain HATPase_c PF02518.21 gi|21229057|ref|NP_634979.1| - 1e-11 44.5 0.7 3e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|21229057|ref|NP_634979.1| - 6e-11 42.3 7.6 7.9e-05 22.7 0.0 3.4 2 1 1 3 3 3 2 HAMP domain HATPase_c_2 PF13581.1 gi|21229057|ref|NP_634979.1| - 0.00038 20.2 0.0 0.0012 18.5 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain PAS PF00989.19 gi|21229057|ref|NP_634979.1| - 0.00069 19.3 0.1 0.0021 17.8 0.1 1.9 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.9 gi|21229057|ref|NP_634979.1| - 0.0025 18.1 0.0 0.0074 16.7 0.0 1.8 1 0 0 1 1 1 1 HWE histidine kinase ResB PF05140.9 gi|21229057|ref|NP_634979.1| - 0.15 10.6 0.1 0.24 9.9 0.1 1.3 1 0 0 1 1 1 0 ResB-like family DUF1724 PF08350.5 gi|21229058|ref|NP_634980.1| - 1e-28 98.6 0.0 2.2e-28 97.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21229058|ref|NP_634980.1| - 0.0022 17.6 0.2 0.0062 16.1 0.1 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|21229058|ref|NP_634980.1| - 0.022 14.5 0.4 0.057 13.2 0.3 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix Transposase_mut PF00872.13 gi|21229059|ref|NP_634981.1| - 2.4e-114 381.8 1.9 3e-114 381.5 1.3 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.4 gi|21229059|ref|NP_634981.1| - 1.3e-13 50.9 0.0 4.7e-13 49.1 0.0 2.0 2 0 0 2 2 2 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.12 gi|21229059|ref|NP_634981.1| - 9.2e-06 25.4 2.3 0.0035 16.9 0.1 2.3 1 1 1 2 2 2 2 Transposase DDE_Tnp_IS240 PF13610.1 gi|21229059|ref|NP_634981.1| - 0.0023 17.9 3.3 0.12 12.3 2.0 2.6 1 1 1 2 2 2 1 DDE domain HipA_C PF07804.7 gi|21229059|ref|NP_634981.1| - 0.065 13.3 0.1 0.95 9.6 0.1 2.6 2 0 0 2 2 2 0 HipA-like C-terminal domain DUF1724 PF08350.5 gi|21229060|ref|NP_634982.1| - 1.2e-24 85.6 0.0 2.1e-24 84.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_27 PF13463.1 gi|21229060|ref|NP_634982.1| - 0.00053 20.2 0.1 0.00097 19.4 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIID_90kDa PF04494.10 gi|21229060|ref|NP_634982.1| - 0.012 15.6 1.1 0.017 15.2 0.1 1.7 2 0 0 2 2 2 0 WD40 associated region in TFIID subunit Mss4 PF04421.8 gi|21229060|ref|NP_634982.1| - 0.11 12.3 0.0 0.3 10.9 0.0 1.7 1 0 0 1 1 1 0 Mss4 protein PAS_3 PF08447.6 gi|21229061|ref|NP_634983.1| - 2.5e-37 126.8 0.6 2.4e-18 65.9 0.0 2.2 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.1 gi|21229061|ref|NP_634983.1| - 8.3e-15 55.0 0.4 1.6e-06 28.4 0.0 2.2 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|21229061|ref|NP_634983.1| - 4.4e-10 39.3 1.1 0.00045 19.9 0.1 2.6 2 2 0 2 2 2 2 PAS fold PAS_11 PF14598.1 gi|21229061|ref|NP_634983.1| - 5.9e-06 26.2 0.0 0.065 13.1 0.0 2.2 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|21229061|ref|NP_634983.1| - 1.4e-05 25.0 0.0 0.074 13.1 0.0 2.5 2 1 0 2 2 2 2 PAS fold MoaE PF02391.12 gi|21229061|ref|NP_634983.1| - 0.006 16.3 0.2 0.19 11.5 0.0 2.3 2 0 0 2 2 2 1 MoaE protein zf-ZPR1 PF03367.8 gi|21229061|ref|NP_634983.1| - 0.0091 15.1 0.8 2.1 7.4 0.2 2.2 2 0 0 2 2 2 2 ZPR1 zinc-finger domain DUF3116 PF11313.3 gi|21229061|ref|NP_634983.1| - 0.055 13.0 0.4 11 5.6 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3116) DUF2769 PF10967.3 gi|21229062|ref|NP_634984.1| - 2.1e-09 37.5 5.0 2.1e-09 37.5 3.4 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2769) B12-binding PF02310.14 gi|21229063|ref|NP_634985.1| - 3.3e-26 91.5 0.4 6.4e-26 90.5 0.3 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|21229063|ref|NP_634985.1| - 2.7e-18 65.7 0.8 4.6e-18 65.0 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain ComA PF02679.10 gi|21229063|ref|NP_634985.1| - 0.0096 14.9 0.1 0.089 11.7 0.0 2.1 2 0 0 2 2 2 1 (2R)-phospho-3-sulfolactate synthase (ComA) Dimeth_Pyl PF09505.5 gi|21229064|ref|NP_634986.1| - 4.6e-243 806.6 6.5 5.1e-243 806.4 4.5 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) XFP_C PF09363.5 gi|21229064|ref|NP_634986.1| - 0.0036 16.7 0.2 0.0056 16.1 0.1 1.2 1 0 0 1 1 1 1 XFP C-terminal domain Dimeth_Pyl PF09505.5 gi|21229065|ref|NP_634987.1| - 7.5e-62 209.1 2.1 8.3e-62 208.9 1.5 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) PPP5 PF08321.7 gi|21229065|ref|NP_634987.1| - 0.03 14.3 0.5 0.035 14.0 0.3 1.3 1 1 0 1 1 1 0 PPP5 TPR repeat region AA_permease_2 PF13520.1 gi|21229066|ref|NP_634988.1| - 1.1e-66 225.1 48.8 1.4e-66 224.8 33.8 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|21229066|ref|NP_634988.1| - 4.8e-13 48.2 41.0 9.4e-13 47.3 28.5 1.5 1 1 0 1 1 1 1 Amino acid permease Shisa PF13908.1 gi|21229066|ref|NP_634988.1| - 0.022 14.9 0.3 8.2 6.5 0.0 2.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator HisKA_2 PF07568.7 gi|21229067|ref|NP_634989.1| - 3.5e-31 106.8 1.2 3.5e-31 106.8 0.8 2.2 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|21229067|ref|NP_634989.1| - 1.3e-16 60.4 0.8 2.3e-16 59.6 0.1 1.8 2 0 0 2 2 2 1 PAS fold Cache_1 PF02743.13 gi|21229067|ref|NP_634989.1| - 4.7e-13 48.4 0.0 1.2e-12 47.1 0.0 1.7 1 0 0 1 1 1 1 Cache domain HATPase_c PF02518.21 gi|21229067|ref|NP_634989.1| - 5.8e-11 42.1 0.1 1.3e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|21229067|ref|NP_634989.1| - 9.9e-11 41.6 6.4 1.7e-05 24.9 0.1 3.0 2 1 1 3 3 3 2 HAMP domain HATPase_c_2 PF13581.1 gi|21229067|ref|NP_634989.1| - 1.6e-06 27.9 0.0 4.2e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.1 gi|21229067|ref|NP_634989.1| - 0.00015 22.1 0.1 0.00062 20.1 0.0 2.1 2 0 0 2 2 2 1 PAS domain HWE_HK PF07536.9 gi|21229067|ref|NP_634989.1| - 0.00079 19.8 0.0 0.0026 18.1 0.0 1.9 1 0 0 1 1 1 1 HWE histidine kinase PAS PF00989.19 gi|21229067|ref|NP_634989.1| - 0.026 14.3 0.1 0.11 12.2 0.0 2.2 2 0 0 2 2 2 0 PAS fold Cache_2 PF08269.6 gi|21229067|ref|NP_634989.1| - 0.078 12.9 2.4 1.6 8.7 0.0 3.1 3 0 0 3 3 3 0 Cache domain Lactamase_B PF00753.22 gi|21229068|ref|NP_634990.1| - 1.4e-05 24.8 0.1 2.5e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21229068|ref|NP_634990.1| - 0.0012 18.3 0.0 0.0015 18.1 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain tRNA-synt_1 PF00133.17 gi|21229069|ref|NP_634991.1| - 1.2e-197 657.6 0.8 1.6e-197 657.2 0.5 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|21229069|ref|NP_634991.1| - 1.1e-36 125.8 0.3 1.1e-36 125.8 0.2 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|21229069|ref|NP_634991.1| - 5e-26 91.2 0.6 1e-10 40.8 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|21229069|ref|NP_634991.1| - 6.7e-05 22.1 0.0 0.00017 20.8 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.1 gi|21229069|ref|NP_634991.1| - 0.0018 17.6 0.2 0.0085 15.4 0.0 2.2 2 1 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.13 gi|21229069|ref|NP_634991.1| - 0.0039 15.9 0.0 0.026 13.2 0.0 2.2 2 1 1 3 3 3 1 tRNA synthetases class I (K) MAF_flag10 PF01973.13 gi|21229070|ref|NP_634992.1| - 1.9e-31 108.8 0.0 2.3e-31 108.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 DUF2100 PF09873.4 gi|21229070|ref|NP_634992.1| - 0.063 12.7 0.0 0.17 11.3 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2100) DUF1448 PF07289.6 gi|21229071|ref|NP_634993.1| - 0.11 11.4 0.7 0.098 11.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1448) DUF2082 PF09855.4 gi|21229072|ref|NP_634994.1| - 2.8e-06 27.0 3.8 1.5e-05 24.7 2.6 1.9 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-ribbon_3 PF13248.1 gi|21229072|ref|NP_634994.1| - 0.0051 15.9 1.8 0.077 12.2 0.2 2.2 2 0 0 2 2 2 1 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|21229072|ref|NP_634994.1| - 0.0054 16.1 5.0 0.048 13.1 0.4 2.5 2 0 0 2 2 2 1 A2L zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|21229072|ref|NP_634994.1| - 0.0086 15.3 5.2 0.26 10.6 0.7 2.4 2 1 0 2 2 2 2 TFIIB zinc-binding PhnA_Zn_Ribbon PF08274.7 gi|21229072|ref|NP_634994.1| - 0.017 14.9 3.5 0.072 12.8 0.3 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.1 gi|21229072|ref|NP_634994.1| - 0.027 13.9 5.1 0.028 13.9 0.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|21229072|ref|NP_634994.1| - 0.03 13.5 0.7 0.057 12.6 0.5 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.5 gi|21229072|ref|NP_634994.1| - 0.034 14.1 3.8 1.3 9.0 0.3 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF35_N PF12172.3 gi|21229072|ref|NP_634994.1| - 0.067 13.1 0.5 3.2 7.7 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF1936 PF09151.5 gi|21229072|ref|NP_634994.1| - 0.084 12.3 4.9 1.5 8.4 0.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1936) ADK_lid PF05191.9 gi|21229072|ref|NP_634994.1| - 0.12 12.0 1.8 3 7.6 0.2 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-tcix PF14952.1 gi|21229072|ref|NP_634994.1| - 0.12 11.6 0.3 0.12 11.6 0.2 1.7 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Lar_restr_allev PF14354.1 gi|21229072|ref|NP_634994.1| - 0.14 12.5 3.9 0.33 11.3 2.7 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.2 gi|21229072|ref|NP_634994.1| - 0.2 11.5 3.1 5.5 6.8 2.3 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-ISL3 PF14690.1 gi|21229072|ref|NP_634994.1| - 0.28 11.2 1.5 1.8 8.6 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 TFIIS_C PF01096.13 gi|21229072|ref|NP_634994.1| - 0.29 10.7 7.1 2.1 8.0 0.4 2.4 3 0 0 3 3 2 0 Transcription factor S-II (TFIIS) OrfB_Zn_ribbon PF07282.6 gi|21229072|ref|NP_634994.1| - 0.77 9.4 3.1 31 4.3 2.2 2.1 1 1 0 1 1 1 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.14 gi|21229072|ref|NP_634994.1| - 1.6 8.3 5.2 0.36 10.3 0.9 1.9 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DUF1610 PF07754.6 gi|21229072|ref|NP_634994.1| - 2.8 8.1 7.3 5.4 7.2 1.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) DUF1660 PF07874.6 gi|21229073|ref|NP_634995.1| - 0.024 14.9 0.6 0.033 14.4 0.4 1.3 1 0 0 1 1 1 0 Prophage protein (DUF1660) AAA_14 PF13173.1 gi|21229074|ref|NP_634996.1| - 1.5e-19 70.1 0.0 3.7e-19 68.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain DUF4143 PF13635.1 gi|21229074|ref|NP_634996.1| - 2.3e-10 40.5 0.1 3.8e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) Arch_ATPase PF01637.13 gi|21229074|ref|NP_634996.1| - 0.0028 17.4 0.0 0.0068 16.1 0.0 1.7 1 0 0 1 1 1 1 Archaeal ATPase AAA PF00004.24 gi|21229074|ref|NP_634996.1| - 0.12 12.5 0.0 0.33 11.1 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Miro PF08477.8 gi|21229074|ref|NP_634996.1| - 0.12 12.8 0.0 0.34 11.4 0.0 1.8 1 0 0 1 1 1 0 Miro-like protein CTP_transf_2 PF01467.21 gi|21229075|ref|NP_634997.1| - 8.3e-07 29.1 0.0 5.6e-06 26.4 0.0 2.2 2 1 0 2 2 2 1 Cytidylyltransferase DUF2204 PF09970.4 gi|21229076|ref|NP_634998.1| - 1.4e-05 24.6 0.1 2.3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) TrmB PF01978.14 gi|21229077|ref|NP_634999.1| - 4.1e-11 42.4 1.0 3.5e-05 23.4 0.1 2.5 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.1 gi|21229077|ref|NP_634999.1| - 1.5e-06 27.6 0.1 0.0039 16.8 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain HTH_28 PF13518.1 gi|21229077|ref|NP_634999.1| - 5.1e-06 26.3 0.0 0.0031 17.4 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|21229077|ref|NP_634999.1| - 6.1e-06 25.8 1.3 0.0048 16.5 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_29 PF13551.1 gi|21229077|ref|NP_634999.1| - 1.8e-05 24.8 0.0 0.0023 18.0 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn helix GerE PF00196.14 gi|21229077|ref|NP_634999.1| - 0.00015 21.0 2.6 0.015 14.6 0.4 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_24 PF13412.1 gi|21229077|ref|NP_634999.1| - 0.00064 19.0 1.5 0.0015 17.9 0.4 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|21229077|ref|NP_634999.1| - 0.00072 19.1 0.0 0.12 12.0 0.0 2.4 2 0 0 2 2 2 1 MarR family HTH_17 PF12728.2 gi|21229077|ref|NP_634999.1| - 0.00074 19.7 0.3 1.2 9.4 0.0 2.7 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_20 PF12840.2 gi|21229077|ref|NP_634999.1| - 0.0045 16.7 0.0 1.7 8.5 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.1 gi|21229077|ref|NP_634999.1| - 0.0052 17.0 0.8 0.59 10.4 0.0 2.4 2 0 0 2 2 2 1 Winged helix DNA-binding domain TetR_N PF00440.18 gi|21229077|ref|NP_634999.1| - 0.0057 16.2 1.4 0.24 11.0 0.0 3.2 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family Terminase_5 PF06056.7 gi|21229077|ref|NP_634999.1| - 0.0096 15.4 0.1 2.8 7.5 0.0 3.1 3 0 0 3 3 3 1 Putative ATPase subunit of terminase (gpP-like) HTH_6 PF01418.12 gi|21229077|ref|NP_634999.1| - 0.02 14.6 0.1 1.3 8.8 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_7 PF02796.10 gi|21229077|ref|NP_634999.1| - 0.027 14.3 0.4 0.39 10.6 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MotA_activ PF09114.5 gi|21229077|ref|NP_634999.1| - 0.032 13.9 0.0 0.081 12.6 0.0 1.7 1 0 0 1 1 1 0 Transcription factor MotA, activation domain Rrf2 PF02082.15 gi|21229077|ref|NP_634999.1| - 0.032 14.3 1.2 0.12 12.5 0.1 2.1 2 0 0 2 2 2 0 Transcriptional regulator HTH_36 PF13730.1 gi|21229077|ref|NP_634999.1| - 0.04 14.0 0.8 0.14 12.2 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain NUMOD1 PF07453.8 gi|21229077|ref|NP_634999.1| - 0.045 13.5 0.3 0.19 11.6 0.2 2.2 1 0 0 1 1 1 0 NUMOD1 domain SgrR_N PF12793.2 gi|21229077|ref|NP_634999.1| - 0.049 13.6 0.0 0.11 12.4 0.0 1.5 1 1 0 1 1 1 0 Sugar transport-related sRNA regulator N-term HTH_11 PF08279.7 gi|21229077|ref|NP_634999.1| - 0.063 12.9 4.3 0.24 11.0 0.4 2.6 2 0 0 2 2 2 0 HTH domain MarR PF01047.17 gi|21229077|ref|NP_634999.1| - 0.071 12.8 1.2 3.7 7.3 0.1 2.3 2 0 0 2 2 2 0 MarR family HTH_40 PF14493.1 gi|21229077|ref|NP_634999.1| - 0.085 13.0 3.7 0.24 11.6 0.0 3.0 3 2 0 3 3 3 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.15 gi|21229077|ref|NP_634999.1| - 0.099 12.6 0.0 3.4 7.6 0.0 2.3 2 0 0 2 2 2 0 Transposase CDC24 PF06395.6 gi|21229077|ref|NP_634999.1| - 0.11 12.6 0.4 0.64 10.1 0.0 2.3 2 1 1 3 3 3 0 CDC24 Calponin SOG2 PF10428.4 gi|21229077|ref|NP_634999.1| - 0.11 11.1 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein HTH_38 PF13936.1 gi|21229077|ref|NP_634999.1| - 0.11 12.0 0.3 7.3 6.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain LacI PF00356.16 gi|21229077|ref|NP_634999.1| - 0.12 12.0 0.0 7.2 6.3 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family HTH_1 PF00126.22 gi|21229077|ref|NP_634999.1| - 0.14 11.9 0.0 0.36 10.6 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_10 PF04967.7 gi|21229077|ref|NP_634999.1| - 0.14 11.7 1.3 1.8 8.2 0.0 2.4 2 0 0 2 2 2 0 HTH DNA binding domain HTH_IclR PF09339.5 gi|21229077|ref|NP_634999.1| - 0.15 11.6 0.0 10 5.8 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain HSDR_N PF04313.9 gi|21229078|ref|NP_635000.1| - 2.9e-19 69.5 1.7 7.1e-19 68.3 0.0 2.5 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.10 gi|21229078|ref|NP_635000.1| - 4.8e-13 49.3 0.1 1.2e-12 48.0 0.1 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|21229078|ref|NP_635000.1| - 2.5e-08 33.5 0.0 5.7e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase THP2 PF09432.5 gi|21229079|ref|NP_635001.1| - 0.02 14.7 0.3 0.06 13.2 0.2 1.9 1 0 0 1 1 1 0 Tho complex subunit THP2 Methyltransf_20 PF12147.3 gi|21229079|ref|NP_635001.1| - 0.037 12.9 0.0 0.062 12.1 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methylase_S PF01420.14 gi|21229080|ref|NP_635002.1| - 1.2e-06 28.6 0.1 0.0039 17.2 0.0 2.3 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain IncA PF04156.9 gi|21229080|ref|NP_635002.1| - 0.001 18.7 2.7 0.0029 17.2 0.4 2.0 2 0 0 2 2 2 1 IncA protein Spo7_2_N PF15407.1 gi|21229080|ref|NP_635002.1| - 0.062 12.7 0.5 1.5 8.3 0.0 2.4 2 0 0 2 2 2 0 Sporulation protein family 7 DUF1016 PF06250.6 gi|21229081|ref|NP_635003.1| - 8.9e-144 478.3 2.4 1e-143 478.1 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1016) DUF3269 PF11673.3 gi|21229082|ref|NP_635004.1| - 0.14 12.5 0.1 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3269) N6_Mtase PF02384.11 gi|21229083|ref|NP_635005.1| - 1.2e-51 175.6 0.0 1.9e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21229083|ref|NP_635005.1| - 8.1e-23 81.3 1.1 6.4e-22 78.4 0.4 2.4 2 0 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21229083|ref|NP_635005.1| - 1e-09 38.4 0.0 5.2e-09 36.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain UPF0020 PF01170.13 gi|21229083|ref|NP_635005.1| - 0.00012 21.7 0.0 0.00023 20.7 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Eco57I PF07669.6 gi|21229083|ref|NP_635005.1| - 0.076 13.3 0.0 16 5.8 0.0 2.6 2 0 0 2 2 2 0 Eco57I restriction-modification methylase Pyridox_ox_2 PF12900.2 gi|21229084|ref|NP_635006.1| - 1.5e-25 89.7 0.0 1.7e-25 89.5 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|21229084|ref|NP_635006.1| - 8.3e-23 80.2 0.0 1.1e-22 79.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Nitroreductase PF00881.19 gi|21229085|ref|NP_635007.1| - 7.4e-05 22.6 0.0 9e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family DUF688 PF05097.7 gi|21229085|ref|NP_635007.1| - 0.031 13.2 0.0 0.033 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF688) Fer4_13 PF13370.1 gi|21229086|ref|NP_635008.1| - 6.2e-20 71.3 8.6 7.4e-20 71.0 6.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|21229086|ref|NP_635008.1| - 8.6e-11 42.2 6.8 1.1e-10 41.8 4.7 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|21229086|ref|NP_635008.1| - 3e-06 27.3 3.5 4.9e-06 26.7 2.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21229086|ref|NP_635008.1| - 0.0063 16.8 4.3 0.031 14.6 3.1 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|21229086|ref|NP_635008.1| - 0.0088 15.8 1.1 0.012 15.4 0.8 1.2 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Fer4_21 PF14697.1 gi|21229086|ref|NP_635008.1| - 0.012 15.4 6.6 0.043 13.6 3.3 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21229086|ref|NP_635008.1| - 0.02 14.5 8.5 0.24 11.0 0.6 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229086|ref|NP_635008.1| - 0.025 15.3 4.5 1.7 9.4 3.5 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21229086|ref|NP_635008.1| - 0.2 11.7 0.4 0.2 11.7 0.3 2.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229086|ref|NP_635008.1| - 0.9 9.3 6.9 2.7 7.8 4.8 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229086|ref|NP_635008.1| - 3.7 7.6 10.0 0.3 11.0 1.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229086|ref|NP_635008.1| - 4.8 7.2 8.7 6.8 6.7 1.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.15 gi|21229087|ref|NP_635009.1| - 1.5e-06 27.7 1.0 3.4e-06 26.6 0.1 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21229087|ref|NP_635009.1| - 3.9e-06 26.5 0.3 1.1e-05 25.0 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|21229087|ref|NP_635009.1| - 0.0027 17.5 0.3 0.0066 16.2 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|21229087|ref|NP_635009.1| - 0.019 14.9 0.1 0.058 13.4 0.1 1.9 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF3826 PF12875.2 gi|21229087|ref|NP_635009.1| - 0.02 14.6 0.1 0.04 13.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3826) HTH_24 PF13412.1 gi|21229087|ref|NP_635009.1| - 0.037 13.4 0.1 0.12 11.7 0.1 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.6 gi|21229087|ref|NP_635009.1| - 0.066 13.1 0.0 0.23 11.4 0.0 1.9 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein BRCA-2_OB3 PF09104.5 gi|21229087|ref|NP_635009.1| - 0.11 12.2 0.1 0.23 11.2 0.1 1.6 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DUF919 PF06034.6 gi|21229087|ref|NP_635009.1| - 0.14 11.8 1.2 5.4 6.7 0.1 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) Wyosine_form PF08608.7 gi|21229088|ref|NP_635010.1| - 0.063 13.3 0.0 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Wyosine base formation VWA_2 PF13519.1 gi|21229089|ref|NP_635011.1| - 5.9e-10 39.5 0.0 9.6e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.23 gi|21229089|ref|NP_635011.1| - 1.2e-05 25.1 0.0 2.9e-05 23.8 0.0 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain CbbQ_C PF08406.5 gi|21229090|ref|NP_635012.1| - 1.3e-33 114.8 0.1 1.1e-32 111.8 0.0 2.1 2 0 0 2 2 2 1 CbbQ/NirQ/NorQ C-terminal AAA_5 PF07728.9 gi|21229090|ref|NP_635012.1| - 4.5e-32 110.6 0.0 6.2e-32 110.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|21229090|ref|NP_635012.1| - 0.00039 20.5 0.0 0.00068 19.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|21229090|ref|NP_635012.1| - 0.0017 18.2 0.0 0.0046 16.8 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21229090|ref|NP_635012.1| - 0.0025 18.0 0.0 0.004 17.3 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.6 gi|21229090|ref|NP_635012.1| - 0.0051 16.4 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|21229090|ref|NP_635012.1| - 0.011 15.2 0.0 0.027 13.9 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain ResIII PF04851.10 gi|21229090|ref|NP_635012.1| - 0.011 15.5 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RNA_helicase PF00910.17 gi|21229090|ref|NP_635012.1| - 0.026 14.6 0.0 0.049 13.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.16 gi|21229090|ref|NP_635012.1| - 0.026 13.6 0.0 2.9 6.9 0.0 2.3 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI Arch_ATPase PF01637.13 gi|21229090|ref|NP_635012.1| - 0.032 13.9 0.0 0.058 13.0 0.0 1.4 1 0 0 1 1 1 0 Archaeal ATPase NACHT PF05729.7 gi|21229090|ref|NP_635012.1| - 0.058 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain Radical_SAM PF04055.16 gi|21229091|ref|NP_635013.1| - 1e-05 25.8 3.5 2.2e-05 24.6 0.2 2.5 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21229091|ref|NP_635013.1| - 0.00018 21.6 1.5 0.00057 20.0 1.0 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21229091|ref|NP_635013.1| - 0.028 14.4 0.1 0.076 13.0 0.1 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain zf-tcix PF14952.1 gi|21229091|ref|NP_635013.1| - 5.2 6.4 11.4 5 6.5 0.3 2.4 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding HisKA_2 PF07568.7 gi|21229092|ref|NP_635014.1| - 6.2e-28 96.4 0.2 1.4e-27 95.2 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.6 gi|21229092|ref|NP_635014.1| - 1.2e-15 57.3 0.0 2.2e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|21229092|ref|NP_635014.1| - 3.4e-12 46.0 0.1 8.5e-12 44.7 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|21229092|ref|NP_635014.1| - 1.5e-06 28.5 0.0 3e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.1 gi|21229092|ref|NP_635014.1| - 0.00017 21.8 0.0 0.00063 20.0 0.0 2.0 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.1 gi|21229092|ref|NP_635014.1| - 0.022 14.5 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Nup188 PF10487.4 gi|21229093|ref|NP_635015.1| - 0.047 11.6 0.1 0.053 11.4 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 Dpoe2NT PF12213.3 gi|21229093|ref|NP_635015.1| - 0.14 12.0 0.4 0.22 11.4 0.3 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal Nitroreductase PF00881.19 gi|21229094|ref|NP_635016.1| - 7.5e-21 74.6 0.0 8.6e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family His_Phos_1 PF00300.17 gi|21229095|ref|NP_635017.1| - 1.6e-40 138.7 0.0 2e-40 138.4 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF4110 PF13422.1 gi|21229095|ref|NP_635017.1| - 0.023 14.4 0.0 0.052 13.3 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4110) HD PF01966.17 gi|21229096|ref|NP_635018.1| - 2.6e-08 33.9 0.7 4.2e-08 33.2 0.4 1.4 1 1 0 1 1 1 1 HD domain PepSY PF03413.14 gi|21229097|ref|NP_635019.1| - 9.2e-09 35.8 1.8 0.0049 17.4 0.1 3.6 3 1 0 3 3 3 2 Peptidase propeptide and YPEB domain YPEB PF14620.1 gi|21229097|ref|NP_635019.1| - 0.00076 18.5 2.1 0.0022 17.0 0.3 2.1 1 1 1 2 2 2 1 YpeB sporulation RNA_polI_A14 PF08203.6 gi|21229097|ref|NP_635019.1| - 0.025 14.7 0.3 1.7 8.9 0.0 2.4 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 PepSY PF03413.14 gi|21229098|ref|NP_635020.1| - 1.6e-07 31.8 1.2 0.0019 18.8 0.2 3.5 3 0 0 3 3 3 2 Peptidase propeptide and YPEB domain YPEB PF14620.1 gi|21229098|ref|NP_635020.1| - 0.00062 18.8 2.0 0.0028 16.7 0.2 2.1 1 1 1 2 2 2 1 YpeB sporulation RNA_polI_A14 PF08203.6 gi|21229098|ref|NP_635020.1| - 0.014 15.6 0.7 0.82 9.9 0.0 2.4 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 Peptidase_C25 PF01364.13 gi|21229099|ref|NP_635021.1| - 0.066 12.1 0.9 0.076 11.9 0.6 1.1 1 0 0 1 1 1 0 Peptidase family C25 CHAT PF12770.2 gi|21229099|ref|NP_635021.1| - 0.11 11.6 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 CHAT domain DDE_3 PF13358.1 gi|21229100|ref|NP_635022.1| - 5.3e-20 71.6 0.1 6.7e-20 71.3 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF3228 PF11539.3 gi|21229100|ref|NP_635022.1| - 0.0003 19.9 0.4 0.00052 19.1 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) rve PF00665.21 gi|21229100|ref|NP_635022.1| - 0.013 15.5 0.0 0.027 14.5 0.0 1.5 1 0 0 1 1 1 0 Integrase core domain DUF287 PF03384.9 gi|21229100|ref|NP_635022.1| - 0.048 13.8 0.7 0.048 13.8 0.5 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 Uds1 PF15456.1 gi|21229100|ref|NP_635022.1| - 0.09 12.7 0.8 0.19 11.7 0.1 1.8 2 0 0 2 2 2 0 Up-regulated During Septation HTH_29 PF13551.1 gi|21229101|ref|NP_635023.1| - 4.6e-22 78.2 0.1 5.8e-22 77.9 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21229101|ref|NP_635023.1| - 2.5e-11 44.1 0.4 5.8e-10 39.8 0.0 2.1 1 1 1 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21229101|ref|NP_635023.1| - 2.4e-09 36.5 0.1 7.4e-09 34.9 0.1 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21229101|ref|NP_635023.1| - 2.9e-08 33.5 0.0 6.4e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.10 gi|21229101|ref|NP_635023.1| - 0.00013 21.7 0.4 0.00077 19.2 0.4 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase TrmB PF01978.14 gi|21229101|ref|NP_635023.1| - 0.0026 17.4 0.1 0.19 11.4 0.1 2.3 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|21229101|ref|NP_635023.1| - 0.0068 16.0 0.1 0.013 15.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family LZ_Tnp_IS481 PF13011.1 gi|21229101|ref|NP_635023.1| - 0.1 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 RHH_2 PF03693.9 gi|21229101|ref|NP_635023.1| - 0.1 12.7 0.2 1.5 9.0 0.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0156) HTH_17 PF12728.2 gi|21229101|ref|NP_635023.1| - 0.15 12.3 0.6 0.54 10.5 0.0 2.1 3 0 0 3 3 3 0 Helix-turn-helix domain ResIII PF04851.10 gi|21229102|ref|NP_635024.1| - 1.1e-26 93.7 0.0 5.6e-25 88.2 0.0 2.8 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|21229102|ref|NP_635024.1| - 3.5e-17 62.0 0.2 8.6e-17 60.7 0.1 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|21229102|ref|NP_635024.1| - 3.6e-09 36.3 0.0 1e-08 34.8 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.1 gi|21229102|ref|NP_635024.1| - 0.067 12.9 0.2 1 9.1 0.0 2.7 3 0 0 3 3 3 0 Part of AAA domain DUF790 PF05626.6 gi|21229103|ref|NP_635025.1| - 7.1e-164 544.8 0.5 7.1e-164 544.8 0.3 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF790) Rubis-subs-bind PF09273.6 gi|21229104|ref|NP_635026.1| - 0.049 13.5 0.7 0.054 13.4 0.5 1.1 1 0 0 1 1 1 0 Rubisco LSMT substrate-binding HSP20 PF00011.16 gi|21229105|ref|NP_635027.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.6 1 1 0 1 1 1 0 Hsp20/alpha crystallin family DUF2215 PF10225.4 gi|21229106|ref|NP_635028.1| - 1.5e-11 44.2 35.4 1.5e-09 37.6 10.4 3.6 1 1 2 3 3 3 2 Uncharacterized conserved protein (DUF2215) Acetyltransf_1 PF00583.19 gi|21229107|ref|NP_635029.1| - 5e-13 48.9 0.4 6.8e-13 48.4 0.3 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21229107|ref|NP_635029.1| - 8.1e-13 48.3 0.1 1.1e-12 47.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21229107|ref|NP_635029.1| - 2.2e-06 27.7 0.0 2.7e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|21229107|ref|NP_635029.1| - 0.00049 19.9 0.1 0.0024 17.7 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21229107|ref|NP_635029.1| - 0.00067 19.3 0.1 0.001 18.8 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_5 PF13444.1 gi|21229107|ref|NP_635029.1| - 0.0015 19.1 0.0 0.067 13.7 0.0 2.2 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.1 gi|21229107|ref|NP_635029.1| - 0.017 15.0 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain KaiC PF06745.8 gi|21229108|ref|NP_635030.1| - 7.1e-61 205.2 0.0 7.9e-61 205.0 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|21229108|ref|NP_635030.1| - 1.3e-05 24.6 0.0 2.2e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain GvpD PF07088.6 gi|21229108|ref|NP_635030.1| - 2.7e-05 22.6 0.2 0.00058 18.3 0.1 2.2 1 1 0 1 1 1 1 GvpD gas vesicle protein DUF2075 PF09848.4 gi|21229108|ref|NP_635030.1| - 0.00094 18.2 0.0 0.0018 17.3 0.0 1.5 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|21229108|ref|NP_635030.1| - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 Part of AAA domain RecA PF00154.16 gi|21229108|ref|NP_635030.1| - 0.0039 16.2 0.0 0.0053 15.8 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|21229108|ref|NP_635030.1| - 0.0049 16.3 0.1 0.018 14.5 0.0 1.8 2 1 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_22 PF13401.1 gi|21229108|ref|NP_635030.1| - 0.01 15.9 1.0 0.24 11.5 0.7 2.4 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.21 gi|21229108|ref|NP_635030.1| - 0.078 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_14 PF13173.1 gi|21229108|ref|NP_635030.1| - 0.11 12.4 0.1 0.57 10.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain Response_reg PF00072.19 gi|21229109|ref|NP_635031.1| - 3.9e-28 97.6 0.1 8.7e-28 96.5 0.1 1.6 2 0 0 2 2 2 1 Response regulator receiver domain DUF3939 PF13075.1 gi|21229109|ref|NP_635031.1| - 0.034 13.8 0.1 0.063 13.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3939) KaiC PF06745.8 gi|21229110|ref|NP_635032.1| - 1e-43 149.0 0.2 1.2e-43 148.9 0.1 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.16 gi|21229110|ref|NP_635032.1| - 1e-07 31.3 0.4 1.7e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein IstB_IS21 PF01695.12 gi|21229110|ref|NP_635032.1| - 1.7e-06 27.6 0.3 0.00014 21.3 0.0 2.4 2 1 1 3 3 3 1 IstB-like ATP binding protein GvpD PF07088.6 gi|21229110|ref|NP_635032.1| - 3.5e-06 25.6 0.1 5.9e-06 24.8 0.1 1.3 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.1 gi|21229110|ref|NP_635032.1| - 3.7e-06 26.4 0.3 1.5e-05 24.5 0.2 1.9 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.10 gi|21229110|ref|NP_635032.1| - 1.4e-05 24.0 0.0 0.00033 19.6 0.0 2.2 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_16 PF13191.1 gi|21229110|ref|NP_635032.1| - 2.6e-05 24.2 0.0 3.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Zot PF05707.7 gi|21229110|ref|NP_635032.1| - 5.4e-05 22.7 0.0 0.0036 16.8 0.0 2.2 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) NTPase_1 PF03266.10 gi|21229110|ref|NP_635032.1| - 5.5e-05 22.9 0.9 0.00036 20.2 0.6 2.1 1 1 0 1 1 1 1 NTPase DUF2075 PF09848.4 gi|21229110|ref|NP_635032.1| - 6e-05 22.1 0.0 7.5e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|21229110|ref|NP_635032.1| - 0.00012 22.1 0.1 0.00039 20.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain DEAD PF00270.24 gi|21229110|ref|NP_635032.1| - 0.00027 20.4 0.0 0.00055 19.4 0.0 1.6 1 1 0 1 1 1 1 DEAD/DEAH box helicase cobW PF02492.14 gi|21229110|ref|NP_635032.1| - 0.00034 20.1 0.7 0.0011 18.3 0.3 1.8 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.9 gi|21229110|ref|NP_635032.1| - 0.00089 18.9 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.1 gi|21229110|ref|NP_635032.1| - 0.0011 18.6 0.0 0.0021 17.7 0.0 1.4 1 0 0 1 1 1 1 Part of AAA domain AAA_24 PF13479.1 gi|21229110|ref|NP_635032.1| - 0.003 17.1 1.4 0.04 13.4 1.0 2.1 1 1 0 1 1 1 1 AAA domain AAA PF00004.24 gi|21229110|ref|NP_635032.1| - 0.0031 17.7 0.1 0.022 14.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|21229110|ref|NP_635032.1| - 0.004 17.0 0.1 0.014 15.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21229110|ref|NP_635032.1| - 0.02 14.5 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase T2SE PF00437.15 gi|21229110|ref|NP_635032.1| - 0.021 13.7 0.0 0.033 13.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ResIII PF04851.10 gi|21229110|ref|NP_635032.1| - 0.027 14.3 0.0 0.049 13.4 0.0 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit ArgK PF03308.11 gi|21229110|ref|NP_635032.1| - 0.028 13.1 0.3 3 6.5 0.1 2.1 2 0 0 2 2 2 0 ArgK protein AAA_18 PF13238.1 gi|21229110|ref|NP_635032.1| - 0.068 13.4 2.0 0.18 12.1 1.4 1.8 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.16 gi|21229110|ref|NP_635032.1| - 0.092 12.1 0.1 0.4 10.1 0.1 1.9 1 1 0 1 1 1 0 Guanylate kinase AAA_28 PF13521.1 gi|21229110|ref|NP_635032.1| - 0.1 12.5 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF835 PF05763.7 gi|21229110|ref|NP_635032.1| - 0.12 11.9 0.2 0.23 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_17 PF13207.1 gi|21229110|ref|NP_635032.1| - 0.12 13.2 1.5 0.29 11.9 1.1 1.6 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|21229110|ref|NP_635032.1| - 0.12 11.7 0.1 0.42 9.9 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain Peptidase_M50 PF02163.17 gi|21229111|ref|NP_635033.1| - 3.9e-27 94.4 0.0 6.6e-26 90.4 0.0 2.5 2 1 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 gi|21229111|ref|NP_635033.1| - 2.4e-15 56.1 0.0 1.6e-08 34.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.19 gi|21229111|ref|NP_635033.1| - 0.00047 20.2 0.1 0.81 9.9 0.0 2.5 2 0 0 2 2 2 2 PDZ domain (Also known as DHR or GLGF) GRASP55_65 PF04495.9 gi|21229111|ref|NP_635033.1| - 0.057 13.4 0.1 2 8.4 0.0 2.5 1 1 1 2 2 2 0 GRASP55/65 PDZ-like domain CutA1 PF03091.10 gi|21229112|ref|NP_635034.1| - 2e-28 98.0 0.2 2.2e-28 97.9 0.2 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein FixG_C PF11614.3 gi|21229113|ref|NP_635035.1| - 0.0064 16.5 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase Calpain_inhib PF00748.14 gi|21229113|ref|NP_635035.1| - 0.038 14.3 1.3 0.06 13.6 0.9 1.2 1 0 0 1 1 1 0 Calpain inhibitor NPCBM_assoc PF10633.4 gi|21229113|ref|NP_635035.1| - 0.052 13.5 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF916 PF06030.7 gi|21229113|ref|NP_635035.1| - 0.076 12.8 0.6 0.5 10.1 0.0 2.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF916) DUF2117 PF09890.4 gi|21229114|ref|NP_635036.1| - 5.1e-82 274.2 0.0 6.7e-82 273.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) FtsX PF02687.16 gi|21229115|ref|NP_635037.1| - 3.9e-24 84.7 8.7 5.4e-24 84.2 6.1 1.2 1 0 0 1 1 1 1 FtsX-like permease family MacB_PCD PF12704.2 gi|21229115|ref|NP_635037.1| - 3.3e-17 62.8 0.0 3.3e-17 62.8 0.0 1.7 2 0 0 2 2 2 1 MacB-like periplasmic core domain SUR7 PF06687.7 gi|21229115|ref|NP_635037.1| - 0.094 12.2 0.4 0.15 11.6 0.3 1.3 1 0 0 1 1 1 0 SUR7/PalI family DUF3344 PF11824.3 gi|21229116|ref|NP_635038.1| - 3.5e-50 170.8 2.3 4e-50 170.6 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) NPCBM_assoc PF10633.4 gi|21229117|ref|NP_635039.1| - 0.0093 16.0 0.0 4.3 7.4 0.0 2.9 2 1 1 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase ABC_tran PF00005.22 gi|21229118|ref|NP_635040.1| - 1.5e-61 206.6 0.1 2e-32 112.3 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|21229118|ref|NP_635040.1| - 8.1e-16 58.8 6.1 5e-06 26.6 0.1 4.2 2 2 0 3 3 3 2 AAA domain SMC_N PF02463.14 gi|21229118|ref|NP_635040.1| - 4.4e-11 42.4 0.9 0.00017 20.9 0.1 3.6 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|21229118|ref|NP_635040.1| - 2.4e-09 37.4 2.0 0.00033 20.7 0.2 3.4 2 2 0 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|21229118|ref|NP_635040.1| - 4e-09 36.7 3.7 0.00028 20.9 0.1 3.5 3 1 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.1 gi|21229118|ref|NP_635040.1| - 8e-08 31.6 0.0 0.0019 17.6 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF258 PF03193.11 gi|21229118|ref|NP_635040.1| - 1.4e-07 30.8 0.1 0.0019 17.4 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|21229118|ref|NP_635040.1| - 2.6e-06 27.0 0.0 0.036 13.4 0.0 3.7 4 0 0 4 4 4 2 AAA domain AAA_33 PF13671.1 gi|21229118|ref|NP_635040.1| - 1.4e-05 24.9 0.0 0.28 11.0 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_23 PF13476.1 gi|21229118|ref|NP_635040.1| - 1.6e-05 25.2 2.5 0.059 13.6 0.0 2.7 3 1 0 3 3 2 2 AAA domain AAA PF00004.24 gi|21229118|ref|NP_635040.1| - 3.1e-05 24.1 0.6 0.098 12.8 0.0 3.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.1 gi|21229118|ref|NP_635040.1| - 3.7e-05 23.5 1.9 0.072 13.0 0.1 3.8 3 2 0 3 3 2 1 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|21229118|ref|NP_635040.1| - 3.9e-05 23.2 0.1 0.17 11.5 0.0 2.6 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 AAA_5 PF07728.9 gi|21229118|ref|NP_635040.1| - 5.2e-05 22.9 0.2 0.1 12.3 0.0 3.0 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) AAA_15 PF13175.1 gi|21229118|ref|NP_635040.1| - 5.3e-05 22.4 0.5 0.42 9.6 0.1 3.9 3 1 1 4 4 4 1 AAA ATPase domain NACHT PF05729.7 gi|21229118|ref|NP_635040.1| - 7.8e-05 22.3 1.5 0.45 10.1 0.0 3.2 4 0 0 4 4 2 2 NACHT domain Mg_chelatase PF01078.16 gi|21229118|ref|NP_635040.1| - 8.8e-05 21.7 0.2 0.026 13.6 0.0 2.6 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI AAA_17 PF13207.1 gi|21229118|ref|NP_635040.1| - 0.00017 22.4 0.0 0.71 10.7 0.0 3.3 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.1 gi|21229118|ref|NP_635040.1| - 0.00021 21.1 0.2 1.1 9.1 0.0 3.2 2 1 0 3 3 3 2 AAA domain ABC_ATPase PF09818.4 gi|21229118|ref|NP_635040.1| - 0.00045 18.9 0.0 0.76 8.2 0.0 3.2 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_10 PF12846.2 gi|21229118|ref|NP_635040.1| - 0.00047 19.6 0.6 2.5 7.4 0.0 3.5 3 1 0 3 3 3 1 AAA-like domain RNA_helicase PF00910.17 gi|21229118|ref|NP_635040.1| - 0.0014 18.7 0.1 0.64 10.2 0.0 2.4 2 0 0 2 2 2 1 RNA helicase Zeta_toxin PF06414.7 gi|21229118|ref|NP_635040.1| - 0.0017 17.4 0.0 0.17 10.9 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin Rad17 PF03215.10 gi|21229118|ref|NP_635040.1| - 0.0019 16.9 0.5 0.01 14.5 0.0 2.0 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|21229118|ref|NP_635040.1| - 0.0023 18.2 2.7 0.94 9.7 0.0 3.9 4 1 0 4 4 4 1 AAA domain Arch_ATPase PF01637.13 gi|21229118|ref|NP_635040.1| - 0.0029 17.3 0.2 0.22 11.1 0.0 2.6 2 0 0 2 2 2 1 Archaeal ATPase AAA_28 PF13521.1 gi|21229118|ref|NP_635040.1| - 0.0047 16.8 0.3 2.5 8.0 0.0 2.8 3 0 0 3 3 2 1 AAA domain NB-ARC PF00931.17 gi|21229118|ref|NP_635040.1| - 0.0053 15.6 0.0 2.6 6.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain IstB_IS21 PF01695.12 gi|21229118|ref|NP_635040.1| - 0.0062 15.9 0.3 3.8 6.8 0.0 3.1 4 0 0 4 4 2 0 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21229118|ref|NP_635040.1| - 0.007 16.0 0.0 0.62 9.8 0.0 2.7 2 0 0 2 2 2 1 Part of AAA domain MobB PF03205.9 gi|21229118|ref|NP_635040.1| - 0.0088 15.7 0.0 4.1 7.1 0.0 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B G-alpha PF00503.15 gi|21229118|ref|NP_635040.1| - 0.0088 14.7 0.2 0.96 8.0 0.0 2.2 2 0 0 2 2 2 1 G-protein alpha subunit AAA_30 PF13604.1 gi|21229118|ref|NP_635040.1| - 0.0091 15.5 0.0 2.7 7.5 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.1 gi|21229118|ref|NP_635040.1| - 0.0095 15.5 0.1 4.9 6.6 0.0 3.1 3 0 0 3 3 3 0 AAA domain ATP-synt_ab PF00006.20 gi|21229118|ref|NP_635040.1| - 0.011 15.2 0.0 1.3 8.4 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Miro PF08477.8 gi|21229118|ref|NP_635040.1| - 0.013 15.9 0.1 6.4 7.3 0.0 2.9 3 0 0 3 3 2 0 Miro-like protein SRP54 PF00448.17 gi|21229118|ref|NP_635040.1| - 0.014 14.7 0.0 0.17 11.3 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain HeH PF12949.2 gi|21229118|ref|NP_635040.1| - 0.015 14.8 0.0 0.064 12.8 0.0 2.1 2 0 0 2 2 1 0 HeH/LEM domain AAA_13 PF13166.1 gi|21229118|ref|NP_635040.1| - 0.018 13.5 0.0 0.35 9.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|21229118|ref|NP_635040.1| - 0.018 13.9 0.0 5 5.9 0.0 2.7 3 0 0 3 3 2 0 Type II/IV secretion system protein APS_kinase PF01583.15 gi|21229118|ref|NP_635040.1| - 0.019 14.5 0.0 4.3 6.9 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase Sigma54_activ_2 PF14532.1 gi|21229118|ref|NP_635040.1| - 0.035 14.1 0.1 8.1 6.4 0.0 2.8 3 0 0 3 3 2 0 Sigma-54 interaction domain PduV-EutP PF10662.4 gi|21229118|ref|NP_635040.1| - 0.041 13.3 0.0 6.7 6.1 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SAP PF02037.22 gi|21229118|ref|NP_635040.1| - 0.051 13.1 0.0 0.28 10.7 0.0 2.3 2 0 0 2 2 1 0 SAP domain KaiC PF06745.8 gi|21229118|ref|NP_635040.1| - 0.057 12.5 0.3 2.4 7.1 0.0 3.0 4 0 0 4 4 3 0 KaiC DUF815 PF05673.8 gi|21229118|ref|NP_635040.1| - 0.064 12.1 0.1 0.22 10.4 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Sigma54_activat PF00158.21 gi|21229118|ref|NP_635040.1| - 0.065 12.6 0.0 9.1 5.7 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.10 gi|21229118|ref|NP_635040.1| - 0.066 12.9 0.3 6.6 6.4 0.0 3.2 3 0 0 3 3 3 0 NTPase GTP_EFTU PF00009.22 gi|21229118|ref|NP_635040.1| - 0.15 11.4 0.0 0.93 8.8 0.0 2.2 3 0 0 3 3 2 0 Elongation factor Tu GTP binding domain CPT PF07931.7 gi|21229118|ref|NP_635040.1| - 0.17 11.4 0.0 0.62 9.6 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein PRK PF00485.13 gi|21229118|ref|NP_635040.1| - 0.18 11.3 0.0 1.1 8.8 0.0 2.0 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family cobW PF02492.14 gi|21229118|ref|NP_635040.1| - 0.24 10.8 1.4 4.5 6.6 0.1 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain CbiQ PF02361.11 gi|21229119|ref|NP_635041.1| - 2.3e-32 112.3 8.9 3e-32 111.9 6.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein DUF3344 PF11824.3 gi|21229120|ref|NP_635042.1| - 5.2e-80 268.7 2.3 6.1e-80 268.4 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) DUF3344 PF11824.3 gi|21229121|ref|NP_635043.1| - 5.8e-76 255.4 0.2 8.7e-76 254.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) CARDB PF07705.6 gi|21229121|ref|NP_635043.1| - 4.2e-38 129.4 3.0 4.3e-20 71.6 3.5 2.5 2 0 0 2 2 2 2 CARDB EF-hand_5 PF13202.1 gi|21229121|ref|NP_635043.1| - 0.045 13.1 2.2 0.14 11.5 1.6 1.9 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.27 gi|21229121|ref|NP_635043.1| - 0.14 11.5 1.2 0.53 9.7 0.8 2.0 1 0 0 1 1 1 0 EF hand DUF3344 PF11824.3 gi|21229122|ref|NP_635044.1| - 6.2e-73 245.5 1.3 7.1e-73 245.3 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) ABC_tran PF00005.22 gi|21229123|ref|NP_635045.1| - 3.1e-33 114.9 0.0 4.3e-33 114.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21229123|ref|NP_635045.1| - 1.9e-14 54.3 0.0 1e-07 32.2 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21229123|ref|NP_635045.1| - 2.2e-08 33.5 0.1 1.5e-05 24.3 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21229123|ref|NP_635045.1| - 6.4e-07 28.7 0.0 6.3e-05 22.1 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.2 gi|21229123|ref|NP_635045.1| - 6e-05 22.6 0.0 0.094 12.1 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain DUF258 PF03193.11 gi|21229123|ref|NP_635045.1| - 9.6e-05 21.6 0.0 0.00017 20.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|21229123|ref|NP_635045.1| - 0.00013 22.0 0.0 0.00025 21.0 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|21229123|ref|NP_635045.1| - 0.00015 21.2 0.0 0.00056 19.3 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21229123|ref|NP_635045.1| - 0.013 15.6 0.0 0.32 11.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|21229123|ref|NP_635045.1| - 0.02 14.8 0.0 0.21 11.5 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Arch_ATPase PF01637.13 gi|21229123|ref|NP_635045.1| - 0.02 14.5 0.0 0.042 13.5 0.0 1.5 2 0 0 2 2 2 0 Archaeal ATPase AAA_25 PF13481.1 gi|21229123|ref|NP_635045.1| - 0.028 13.8 0.0 0.067 12.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|21229123|ref|NP_635045.1| - 0.04 13.7 0.0 0.1 12.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA PF00004.24 gi|21229123|ref|NP_635045.1| - 0.067 13.3 0.4 2.2 8.4 0.3 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|21229123|ref|NP_635045.1| - 0.12 11.1 0.1 0.46 9.2 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_17 PF13207.1 gi|21229123|ref|NP_635045.1| - 0.14 12.9 0.1 0.34 11.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain CARDB PF07705.6 gi|21229124|ref|NP_635046.1| - 0.053 13.5 0.0 1.2 9.2 0.0 2.9 2 1 0 2 2 2 0 CARDB DUF3344 PF11824.3 gi|21229125|ref|NP_635047.1| - 1.8e-72 243.9 2.5 1.8e-72 243.9 1.8 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3344) CARDB PF07705.6 gi|21229125|ref|NP_635047.1| - 4.2e-23 81.3 0.3 1.5e-22 79.5 0.2 1.9 1 0 0 1 1 1 1 CARDB Big_3_4 PF13754.1 gi|21229125|ref|NP_635047.1| - 0.05 13.9 2.8 0.11 12.8 0.9 2.4 2 1 0 2 2 2 0 Bacterial Ig-like domain (group 3) Cadherin-like PF12733.2 gi|21229125|ref|NP_635047.1| - 0.26 11.5 4.2 0.15 12.3 0.4 2.5 3 0 0 3 3 3 0 Cadherin-like beta sandwich domain DUF3344 PF11824.3 gi|21229126|ref|NP_635048.1| - 1.1e-153 510.2 41.4 9.7e-80 267.8 14.7 4.1 4 1 0 4 4 4 2 Protein of unknown function (DUF3344) CARDB PF07705.6 gi|21229126|ref|NP_635048.1| - 4.3e-21 74.8 2.6 4.3e-21 74.8 1.8 4.5 4 1 1 5 5 5 1 CARDB Proteasome PF00227.21 gi|21229127|ref|NP_635049.1| - 0.094 11.9 0.1 2 7.6 0.0 2.2 2 0 0 2 2 2 0 Proteasome subunit Lactonase PF10282.4 gi|21229128|ref|NP_635050.1| - 1.3e-18 67.2 10.0 2.4e-08 33.4 0.2 3.5 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.11 gi|21229128|ref|NP_635050.1| - 5.8e-17 61.0 10.1 3.2e-07 28.9 0.5 3.2 1 1 2 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.7 gi|21229128|ref|NP_635050.1| - 5.7e-12 45.5 13.0 0.00068 19.0 2.2 4.7 1 1 3 4 4 4 4 SMP-30/Gluconolaconase/LRE-like region Arylesterase PF01731.15 gi|21229128|ref|NP_635050.1| - 1.9e-10 40.5 16.0 0.063 13.2 0.2 6.5 2 1 4 7 7 6 4 Arylesterase NHL PF01436.16 gi|21229128|ref|NP_635050.1| - 1.1e-08 34.5 30.8 0.073 13.0 0.2 7.3 7 0 0 7 7 7 5 NHL repeat PD40 PF07676.7 gi|21229128|ref|NP_635050.1| - 2.9e-05 23.6 2.6 4.7 6.9 0.0 5.6 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat DUF1513 PF07433.6 gi|21229128|ref|NP_635050.1| - 0.00039 19.4 5.8 0.018 13.9 0.4 3.4 2 1 2 4 4 4 1 Protein of unknown function (DUF1513) Str_synth PF03088.11 gi|21229128|ref|NP_635050.1| - 0.00052 20.0 0.7 24 5.0 0.0 5.3 4 2 2 6 6 6 0 Strictosidine synthase DUF4369 PF14289.1 gi|21229128|ref|NP_635050.1| - 0.00097 19.1 14.2 9.4 6.3 0.1 6.4 6 0 0 6 6 6 2 Domain of unknown function (DUF4369) PQQ_3 PF13570.1 gi|21229128|ref|NP_635050.1| - 0.018 15.3 29.1 0.91 9.8 0.3 6.5 6 1 0 6 6 6 0 PQQ-like domain PBCV_basic_adap PF08789.5 gi|21229128|ref|NP_635050.1| - 0.022 14.4 9.6 14 5.4 0.1 5.4 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain CPSase_L_chain PF00289.17 gi|21229128|ref|NP_635050.1| - 0.21 11.6 7.9 8.8 6.4 0.0 4.9 4 1 2 6 6 6 0 Carbamoyl-phosphate synthase L chain, N-terminal domain DUF4277 PF14104.1 gi|21229129|ref|NP_635051.1| - 1.3e-45 154.3 0.0 2.5e-45 153.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4277) DDE_Tnp_1 PF01609.16 gi|21229129|ref|NP_635051.1| - 2.3e-14 53.4 3.7 1.4e-13 50.9 2.6 2.0 1 1 0 1 1 1 1 Transposase DDE domain DUF2887 PF11103.3 gi|21229129|ref|NP_635051.1| - 4e-05 23.3 3.1 7.6e-05 22.3 2.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2887) dCMP_cyt_deam_1 PF00383.17 gi|21229130|ref|NP_635052.1| - 1.1e-18 66.7 0.0 1.5e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.1 gi|21229130|ref|NP_635052.1| - 0.016 15.0 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase APOBEC_N PF08210.6 gi|21229130|ref|NP_635052.1| - 0.042 13.4 0.0 0.19 11.3 0.0 1.9 1 1 0 1 1 1 0 APOBEC-like N-terminal domain XOO_2897-deam PF14440.1 gi|21229130|ref|NP_635052.1| - 0.08 12.6 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase Glyoxalase PF00903.20 gi|21229131|ref|NP_635053.1| - 2.4e-14 53.3 0.0 2.8e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.2 gi|21229131|ref|NP_635053.1| - 2.9e-10 40.7 0.0 3.6e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.1 gi|21229131|ref|NP_635053.1| - 7.4e-05 22.7 0.0 9.2e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TPR_8 PF13181.1 gi|21229131|ref|NP_635053.1| - 0.14 11.9 0.1 2.9 7.8 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat CxxCxxCC PF03692.10 gi|21229132|ref|NP_635054.1| - 4.4e-09 36.7 7.2 7.2e-09 36.0 4.7 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain NapE PF06796.6 gi|21229133|ref|NP_635055.1| - 0.1 11.9 0.5 0.16 11.3 0.3 1.5 1 1 0 1 1 1 0 Periplasmic nitrate reductase protein NapE zf-CDGSH PF09360.5 gi|21229134|ref|NP_635056.1| - 2.3e-34 116.9 3.3 5e-17 61.4 0.0 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.6 gi|21229134|ref|NP_635056.1| - 1.2e-12 47.4 0.0 3.2e-12 46.0 0.0 1.8 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Rifin_STEVOR PF02009.11 gi|21229136|ref|NP_635058.1| - 0.0074 15.9 0.1 0.0099 15.5 0.1 1.2 1 0 0 1 1 1 1 Rifin/stevor family TMEM154 PF15102.1 gi|21229136|ref|NP_635058.1| - 0.026 14.2 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 TMEM154 protein family TRP PF06011.7 gi|21229136|ref|NP_635058.1| - 0.35 9.3 11.4 0.47 8.9 7.9 1.2 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel UPF0560 PF10577.4 gi|21229136|ref|NP_635058.1| - 0.68 8.1 5.9 0.14 10.3 1.1 1.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0560 DUF4282 PF14110.1 gi|21229136|ref|NP_635058.1| - 0.84 9.8 9.1 0.2 11.8 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) Acetyltransf_7 PF13508.1 gi|21229138|ref|NP_635060.1| - 1.5e-07 31.4 0.1 2.4e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21229138|ref|NP_635060.1| - 5.7e-07 29.4 0.0 8.2e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|21229138|ref|NP_635060.1| - 0.0039 17.3 0.0 0.0059 16.7 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|21229138|ref|NP_635060.1| - 0.034 13.8 0.1 0.078 12.7 0.0 1.5 1 1 0 1 1 1 0 FR47-like protein Y1_Tnp PF01797.11 gi|21229139|ref|NP_635061.1| - 2.5e-40 137.1 0.7 2.8e-40 136.9 0.5 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.4 gi|21229139|ref|NP_635061.1| - 0.0049 16.1 0.1 0.24 10.6 0.0 2.1 2 0 0 2 2 2 2 Conserved mid region of cactin OrfB_IS605 PF01385.14 gi|21229140|ref|NP_635062.1| - 2.9e-44 151.1 0.1 5.2e-44 150.3 0.1 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.6 gi|21229140|ref|NP_635062.1| - 1.4e-26 91.8 0.5 2.7e-26 91.0 0.3 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.3 gi|21229140|ref|NP_635062.1| - 8.3e-16 57.0 1.9 1.7e-15 56.0 1.3 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain zf-C3HC4_3 PF13920.1 gi|21229140|ref|NP_635062.1| - 0.0043 16.6 1.0 0.0078 15.8 0.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 gi|21229140|ref|NP_635062.1| - 0.046 13.5 1.0 0.097 12.5 0.7 1.5 1 0 0 1 1 1 0 Double zinc ribbon SdpI PF13630.1 gi|21229142|ref|NP_635064.1| - 6.7 6.5 12.4 9.4 6.0 1.7 2.4 2 0 0 2 2 2 0 SdpI/YhfL protein family AAA_16 PF13191.1 gi|21229143|ref|NP_635065.1| - 8.7e-05 22.5 0.0 0.00026 21.0 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain Arch_ATPase PF01637.13 gi|21229143|ref|NP_635065.1| - 9.4e-05 22.2 1.3 0.00029 20.6 0.0 2.4 2 0 0 2 2 2 1 Archaeal ATPase DUF815 PF05673.8 gi|21229143|ref|NP_635065.1| - 0.00096 18.1 0.0 0.002 17.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.1 gi|21229143|ref|NP_635065.1| - 0.022 14.2 0.0 0.22 11.0 0.0 2.3 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|21229143|ref|NP_635065.1| - 0.038 14.1 0.0 0.75 9.9 0.0 3.0 3 0 0 3 3 3 0 AAA domain UPF0079 PF02367.12 gi|21229143|ref|NP_635065.1| - 0.089 12.4 0.0 0.22 11.1 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 FrhB_FdhB_C PF04432.8 gi|21229144|ref|NP_635066.1| - 6.4e-47 158.9 0.0 1e-46 158.2 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|21229144|ref|NP_635066.1| - 3.2e-33 113.4 0.0 5.5e-33 112.6 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Oxidored_q6 PF01058.17 gi|21229145|ref|NP_635067.1| - 3.5e-28 97.8 0.2 3.5e-28 97.8 0.1 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|21229145|ref|NP_635067.1| - 6.9e-13 47.6 16.1 4.3e-08 32.4 2.4 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21229145|ref|NP_635067.1| - 6.2e-08 32.9 13.6 3.6e-07 30.4 8.2 2.7 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229145|ref|NP_635067.1| - 8.2e-08 31.9 20.5 9.4e-07 28.5 7.7 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229145|ref|NP_635067.1| - 2.4e-07 30.8 13.6 5.7e-07 29.6 8.0 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229145|ref|NP_635067.1| - 4.1e-07 29.5 18.8 0.00027 20.6 2.5 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229145|ref|NP_635067.1| - 6.3e-07 28.9 18.1 0.00012 21.7 2.0 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21229145|ref|NP_635067.1| - 2.5e-06 27.2 13.9 0.0083 15.9 0.2 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21229145|ref|NP_635067.1| - 6.9e-06 26.7 8.6 0.0025 18.5 0.9 3.1 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21229145|ref|NP_635067.1| - 1.5e-05 24.8 16.3 0.0062 16.7 1.3 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21229145|ref|NP_635067.1| - 1.6e-05 24.8 14.7 0.00015 21.7 8.6 3.1 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21229145|ref|NP_635067.1| - 0.0014 18.9 14.6 0.0086 16.4 0.9 3.2 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21229145|ref|NP_635067.1| - 0.0024 18.1 15.7 0.14 12.4 1.6 3.3 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229145|ref|NP_635067.1| - 0.013 16.0 16.8 0.066 13.7 0.5 3.4 4 0 0 4 4 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21229145|ref|NP_635067.1| - 0.064 13.6 19.6 0.43 11.0 4.2 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21229145|ref|NP_635067.1| - 0.92 10.2 26.0 0.88 10.2 5.9 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain HycI PF01750.13 gi|21229146|ref|NP_635068.1| - 8.3e-33 112.7 0.0 1e-32 112.3 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.14 gi|21229147|ref|NP_635069.1| - 2.6e-37 128.7 10.0 4.6e-19 68.5 3.2 3.9 1 1 1 2 2 2 2 Nickel-dependent hydrogenase DDE_Tnp_1 PF01609.16 gi|21229149|ref|NP_635071.1| - 6.9e-10 38.8 1.7 1.2e-09 38.0 1.2 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|21229149|ref|NP_635071.1| - 0.0066 16.2 1.2 0.034 13.9 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|21229149|ref|NP_635071.1| - 0.04 13.5 1.6 0.44 10.1 0.0 2.9 3 0 0 3 3 3 0 Paired amphipathic helix repeat Glyco_hydro_16 PF00722.16 gi|21229150|ref|NP_635072.1| - 1.9e-06 27.2 3.2 2.3e-06 27.0 2.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 DUF2310 PF10071.4 gi|21229150|ref|NP_635072.1| - 0.0059 15.6 0.9 0.043 12.7 0.2 2.3 3 0 0 3 3 3 1 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) PRNT PF15174.1 gi|21229150|ref|NP_635072.1| - 0.047 13.3 0.1 0.17 11.5 0.0 1.9 2 0 0 2 2 2 0 Prion-related protein testis-specific Glyco_transf_4 PF13439.1 gi|21229151|ref|NP_635073.1| - 0.033 13.9 0.0 0.053 13.2 0.0 1.5 1 1 0 1 1 1 0 Glycosyltransferase Family 4 DUF2346 PF09803.4 gi|21229151|ref|NP_635073.1| - 0.93 9.3 3.2 1 9.2 0.5 2.2 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2346) Glycos_transf_1 PF00534.15 gi|21229152|ref|NP_635074.1| - 1.8e-20 73.0 0.0 2.5e-20 72.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|21229152|ref|NP_635074.1| - 3e-16 59.7 0.0 4.1e-16 59.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.1 gi|21229152|ref|NP_635074.1| - 1.4e-08 34.9 0.0 2.4e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Prenyltrans_1 PF13243.1 gi|21229153|ref|NP_635075.1| - 5.4e-09 36.0 0.0 6.9e-05 22.8 0.0 2.2 1 1 1 2 2 2 2 Prenyltransferase-like Pec_lyase PF09492.5 gi|21229153|ref|NP_635075.1| - 9.1e-05 21.7 0.3 0.13 11.4 0.0 3.1 2 1 1 3 3 3 2 Pectic acid lyase Prenyltrans_2 PF13249.1 gi|21229153|ref|NP_635075.1| - 0.00012 22.4 0.0 0.00037 20.8 0.0 1.9 1 1 0 1 1 1 1 Prenyltransferase-like Glyco_hydro_88 PF07470.8 gi|21229153|ref|NP_635075.1| - 0.023 13.7 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 GFO_IDH_MocA PF01408.17 gi|21229154|ref|NP_635076.1| - 2.2e-22 79.7 0.0 1.4e-21 77.1 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N PF00107.21 gi|21229154|ref|NP_635076.1| - 4.2e-17 61.8 0.0 2.5e-16 59.4 0.0 2.2 3 0 0 3 3 3 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|21229154|ref|NP_635076.1| - 2.5e-05 23.7 0.0 7.4e-05 22.2 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFO_IDH_MocA_C PF02894.12 gi|21229154|ref|NP_635076.1| - 0.00031 20.4 0.0 0.00073 19.3 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain 3HCDH_N PF02737.13 gi|21229154|ref|NP_635076.1| - 0.0036 16.9 0.0 0.13 11.9 0.0 3.0 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.13 gi|21229154|ref|NP_635076.1| - 0.0077 16.2 0.0 0.022 14.7 0.0 1.8 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_18 PF12847.2 gi|21229154|ref|NP_635076.1| - 0.012 16.2 0.0 0.053 14.1 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain 2-Hacid_dh_C PF02826.14 gi|21229154|ref|NP_635076.1| - 0.015 14.4 0.1 0.03 13.4 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|21229154|ref|NP_635076.1| - 0.018 15.4 0.1 0.081 13.3 0.0 2.1 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain ADH_N PF08240.7 gi|21229154|ref|NP_635076.1| - 0.05 13.3 0.3 0.21 11.3 0.0 2.0 1 1 1 2 2 2 0 Alcohol dehydrogenase GroES-like domain YbgS PF13985.1 gi|21229154|ref|NP_635076.1| - 0.17 11.7 0.0 0.38 10.6 0.0 1.5 1 0 0 1 1 1 0 YbgS-like protein UPF0728 PF15092.1 gi|21229155|ref|NP_635077.1| - 0.019 14.8 0.1 0.059 13.2 0.1 1.8 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 CAP18_C PF12153.3 gi|21229155|ref|NP_635077.1| - 0.067 12.8 0.0 0.15 11.6 0.0 1.6 1 0 0 1 1 1 0 LPS binding domain of CAP18 (C terminal) TpcC PF12642.2 gi|21229155|ref|NP_635077.1| - 0.074 12.5 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Conjugative transposon protein TcpC PGA_cap PF09587.5 gi|21229156|ref|NP_635078.1| - 1.3e-32 113.0 0.1 1.6e-32 112.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Pyrid_oxidase_2 PF13883.1 gi|21229156|ref|NP_635078.1| - 0.15 11.8 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF2776 PF10951.3 gi|21229157|ref|NP_635079.1| - 0.049 12.6 0.3 0.052 12.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF2069 PF09842.4 gi|21229157|ref|NP_635079.1| - 0.1 12.5 0.2 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) LTD PF00932.14 gi|21229158|ref|NP_635080.1| - 1.5e-23 83.1 1.7 1.5e-23 83.1 1.2 2.6 3 1 0 3 3 3 1 Lamin Tail Domain Lactamase_B PF00753.22 gi|21229158|ref|NP_635080.1| - 1.8e-13 50.5 2.5 2e-13 50.4 0.5 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|21229158|ref|NP_635080.1| - 3.3e-05 23.5 0.0 6.1e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|21229158|ref|NP_635080.1| - 0.015 15.0 0.0 0.032 13.9 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Inh PF02974.9 gi|21229158|ref|NP_635080.1| - 0.021 14.3 0.1 0.57 9.7 0.0 2.4 2 0 0 2 2 2 0 Protease inhibitor Inh DUF3006 PF11213.3 gi|21229159|ref|NP_635081.1| - 2.7e-21 75.0 2.0 3e-21 74.9 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) DUF904 PF06005.7 gi|21229159|ref|NP_635081.1| - 0.037 14.3 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF904) DUF4201 PF13870.1 gi|21229159|ref|NP_635081.1| - 0.047 13.1 0.2 0.05 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) FMN_red PF03358.10 gi|21229160|ref|NP_635082.1| - 2.1e-27 95.4 0.0 2.9e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21229160|ref|NP_635082.1| - 3e-14 53.0 0.0 4.4e-14 52.4 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold eIF3g PF12353.3 gi|21229160|ref|NP_635082.1| - 0.0047 16.8 1.4 0.55 10.1 0.1 2.2 2 0 0 2 2 2 2 Eukaryotic translation initiation factor 3 subunit G DUF4460 PF14687.1 gi|21229160|ref|NP_635082.1| - 0.077 12.7 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) DUF169 PF02596.10 gi|21229161|ref|NP_635083.1| - 2.9e-34 118.3 0.1 3.3e-34 118.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CarboxypepD_reg PF13620.1 gi|21229162|ref|NP_635084.1| - 0.0018 18.2 0.0 0.0029 17.6 0.0 1.4 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF290 PF01060.18 gi|21229162|ref|NP_635084.1| - 0.0027 17.6 0.0 0.0054 16.7 0.0 1.4 1 0 0 1 1 1 1 Transthyretin-like family DUF4480 PF13715.1 gi|21229162|ref|NP_635084.1| - 0.13 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4480) Peptidase_U9 PF03420.8 gi|21229163|ref|NP_635085.1| - 0.19 10.9 0.0 0.33 10.2 0.0 1.3 1 0 0 1 1 1 0 Prohead core protein protease Peptidase_M15_3 PF08291.6 gi|21229164|ref|NP_635086.1| - 9.5e-29 99.4 0.0 1.5e-28 98.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase M15 Peptidase_M15_2 PF05951.8 gi|21229164|ref|NP_635086.1| - 0.037 13.4 0.0 0.062 12.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF882) Peptidase_S8 PF00082.17 gi|21229165|ref|NP_635087.1| - 1.2e-41 142.7 1.7 1.8e-41 142.1 1.2 1.3 1 0 0 1 1 1 1 Subtilase family FBPase_2 PF06874.6 gi|21229165|ref|NP_635087.1| - 0.039 12.0 0.8 2.9 5.8 0.0 2.1 2 0 0 2 2 2 0 Firmicute fructose-1,6-bisphosphatase DUF483 PF04467.7 gi|21229166|ref|NP_635088.1| - 0.24 11.4 0.0 0.46 10.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF483) Fumerase PF05681.9 gi|21229168|ref|NP_635090.1| - 1.3e-97 326.1 0.0 1.4e-97 325.9 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DBI_PRT PF02277.12 gi|21229168|ref|NP_635090.1| - 0.051 12.6 0.1 0.1 11.6 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyltransferase Fumerase_C PF05683.7 gi|21229169|ref|NP_635091.1| - 8.3e-54 181.8 0.0 9.3e-54 181.6 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus DUF1724 PF08350.5 gi|21229170|ref|NP_635092.1| - 7.8e-16 57.3 0.0 2.1e-15 55.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.15 gi|21229170|ref|NP_635092.1| - 1.4e-05 24.6 0.0 2.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21229170|ref|NP_635092.1| - 0.00031 20.4 0.0 0.00059 19.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|21229170|ref|NP_635092.1| - 0.0047 16.5 0.0 0.01 15.4 0.0 1.6 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.15 gi|21229170|ref|NP_635092.1| - 0.055 13.5 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator DUF4539 PF15072.1 gi|21229170|ref|NP_635092.1| - 0.067 12.8 0.0 1.3 8.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4539) E1-E2_ATPase PF00122.15 gi|21229171|ref|NP_635093.1| - 1.2e-61 207.7 5.1 1.2e-61 207.7 3.5 3.1 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.21 gi|21229171|ref|NP_635093.1| - 2e-32 113.3 0.2 1.3e-31 110.6 0.2 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.16 gi|21229171|ref|NP_635093.1| - 6.4e-32 110.5 4.9 6.4e-32 110.5 3.4 2.6 4 0 0 4 4 4 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.21 gi|21229171|ref|NP_635093.1| - 8.1e-21 73.2 0.0 2e-20 72.0 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_like2 PF13246.1 gi|21229171|ref|NP_635093.1| - 4.2e-19 68.3 0.0 8e-19 67.4 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit HAD PF12710.2 gi|21229171|ref|NP_635093.1| - 2.6e-15 57.0 0.0 6.5e-15 55.8 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|21229171|ref|NP_635093.1| - 1.3e-05 24.8 2.4 0.0015 18.1 0.9 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase TMEM125 PF15109.1 gi|21229171|ref|NP_635093.1| - 0.01 15.9 0.2 0.029 14.4 0.2 1.7 1 0 0 1 1 1 0 TMEM125 protein family PPK2 PF03976.9 gi|21229172|ref|NP_635094.1| - 5.1e-66 222.2 3.1 9e-66 221.4 2.2 1.3 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) MFS_1 PF07690.11 gi|21229173|ref|NP_635095.1| - 5.1e-10 38.6 17.0 7.9e-10 37.9 10.2 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.1 gi|21229173|ref|NP_635095.1| - 0.025 13.0 12.1 0.0061 15.0 5.6 1.8 2 0 0 2 2 2 0 MFS/sugar transport protein MFS_3 PF05977.8 gi|21229173|ref|NP_635095.1| - 0.052 11.6 6.5 0.064 11.3 4.5 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector DUF308 PF03729.8 gi|21229174|ref|NP_635096.1| - 5.8e-21 74.2 54.5 1.9e-11 43.7 14.7 3.1 3 0 0 3 3 3 3 Short repeat of unknown function (DUF308) Herpes_UL73 PF03554.8 gi|21229174|ref|NP_635096.1| - 3 7.7 6.3 3.4 7.5 0.1 3.0 2 1 1 3 3 3 0 UL73 viral envelope glycoprotein NosD PF05048.8 gi|21229175|ref|NP_635097.1| - 2.8e-95 317.9 117.6 1.4e-45 155.2 24.3 4.2 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21229175|ref|NP_635097.1| - 2.3e-45 154.1 112.5 2.2e-12 47.0 18.6 5.0 1 1 1 4 4 4 4 Right handed beta helix region Peptidase_C1 PF00112.18 gi|21229175|ref|NP_635097.1| - 3.2e-20 72.9 0.0 6.5e-20 71.9 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.15 gi|21229175|ref|NP_635097.1| - 2.7e-15 55.8 0.9 8.6e-15 54.2 0.6 1.8 1 0 0 1 1 1 1 PKD domain DUF367 PF04034.8 gi|21229176|ref|NP_635098.1| - 5.6e-46 155.2 0.0 6.8e-46 155.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|21229176|ref|NP_635098.1| - 5.8e-15 54.5 0.2 5.8e-15 54.5 0.1 1.8 2 0 0 2 2 2 1 Possible Fer4-like domain in RNase L inhibitor, RLI DNA_processg_A PF02481.10 gi|21229177|ref|NP_635099.1| - 3.8e-09 35.7 0.2 1.2e-06 27.6 0.2 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.9 gi|21229177|ref|NP_635099.1| - 1.5e-08 34.5 1.2 1.8e-08 34.2 0.0 1.7 2 0 0 2 2 2 1 Possible lysine decarboxylase Topoisom_bac PF01131.15 gi|21229178|ref|NP_635100.1| - 2.4e-114 382.3 0.0 3.2e-114 381.8 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.17 gi|21229178|ref|NP_635100.1| - 7.9e-17 61.0 1.1 1.5e-16 60.2 0.1 2.1 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.14 gi|21229178|ref|NP_635100.1| - 1.4e-14 53.2 4.8 2.2e-14 52.6 0.9 2.4 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.1 gi|21229178|ref|NP_635100.1| - 4.5e-07 29.9 0.9 4.5e-07 29.9 0.6 2.5 3 0 0 3 3 3 1 Helix-hairpin-helix domain Cdd1 PF11731.3 gi|21229178|ref|NP_635100.1| - 9.1e-06 25.5 0.1 2.9e-05 23.9 0.0 1.8 2 0 0 2 2 2 1 Pathogenicity locus DUF4332 PF14229.1 gi|21229178|ref|NP_635100.1| - 0.00038 20.4 0.0 0.00092 19.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) TfoX_C PF04994.8 gi|21229178|ref|NP_635100.1| - 0.00084 19.1 0.0 0.0025 17.6 0.0 1.8 1 0 0 1 1 1 1 TfoX C-terminal domain HEXIM PF15313.1 gi|21229178|ref|NP_635100.1| - 0.022 14.9 0.6 8.6 6.5 0.0 2.5 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein EF-hand_7 PF13499.1 gi|21229178|ref|NP_635100.1| - 0.038 14.1 0.2 0.31 11.2 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain pair HEM4 PF02602.10 gi|21229178|ref|NP_635100.1| - 0.095 11.9 0.2 0.19 10.9 0.2 1.4 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Usp PF00582.21 gi|21229179|ref|NP_635101.1| - 4e-39 133.9 0.5 4.5e-39 133.8 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family Dynamin_N PF00350.18 gi|21229179|ref|NP_635101.1| - 0.064 13.0 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 Dynamin family Beta-Casp PF10996.3 gi|21229180|ref|NP_635102.1| - 2.5e-22 79.1 0.0 7.9e-22 77.5 0.0 1.8 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B_2 PF12706.2 gi|21229180|ref|NP_635102.1| - 1.7e-12 47.3 0.0 3e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|21229180|ref|NP_635102.1| - 4.6e-11 42.7 0.8 2.3e-10 40.4 0.4 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|21229180|ref|NP_635102.1| - 5.9e-10 38.7 0.0 2.2e-09 36.9 0.0 2.0 2 0 0 2 2 2 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_3 PF13483.1 gi|21229180|ref|NP_635102.1| - 0.00012 21.7 0.0 0.0004 20.1 0.0 1.9 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF3237 PF11578.3 gi|21229181|ref|NP_635103.1| - 0.018 14.3 0.0 0.032 13.5 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3237) DUF460 PF04312.8 gi|21229182|ref|NP_635104.1| - 6.5e-46 155.2 0.1 1.9e-45 153.7 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) Reo_sigmaC PF04582.7 gi|21229182|ref|NP_635104.1| - 0.005 16.0 0.6 0.017 14.2 0.5 1.7 1 1 1 2 2 2 1 Reovirus sigma C capsid protein DUF677 PF05055.7 gi|21229182|ref|NP_635104.1| - 0.0065 15.1 7.1 0.012 14.3 4.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF677) Herpes_UL6 PF01763.11 gi|21229182|ref|NP_635104.1| - 0.087 10.9 7.6 0.13 10.3 5.3 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like AAA_13 PF13166.1 gi|21229182|ref|NP_635104.1| - 0.3 9.4 13.3 0.49 8.7 9.2 1.3 1 0 0 1 1 1 0 AAA domain SlyX PF04102.7 gi|21229182|ref|NP_635104.1| - 0.4 11.0 7.8 11 6.4 0.2 2.9 1 1 1 2 2 2 0 SlyX V_ATPase_I PF01496.14 gi|21229182|ref|NP_635104.1| - 0.43 8.3 9.4 0.69 7.6 6.5 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BLOC1_2 PF10046.4 gi|21229182|ref|NP_635104.1| - 0.52 10.4 8.1 0.19 11.9 0.4 2.5 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fib_alpha PF08702.5 gi|21229182|ref|NP_635104.1| - 0.85 9.7 14.5 0.92 9.6 8.8 1.9 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.7 gi|21229182|ref|NP_635104.1| - 1 9.1 7.1 2.6 7.8 4.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) L31 PF09784.4 gi|21229182|ref|NP_635104.1| - 1.2 9.2 12.2 2.5 8.1 1.0 3.0 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 TMF_DNA_bd PF12329.3 gi|21229182|ref|NP_635104.1| - 1.6 8.5 23.9 0.051 13.3 2.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding ACCA PF03255.9 gi|21229182|ref|NP_635104.1| - 1.6 8.2 8.5 0.39 10.2 1.7 2.9 3 1 1 4 4 4 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Spc7 PF08317.6 gi|21229182|ref|NP_635104.1| - 2.5 6.6 17.5 1.5 7.4 4.8 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.6 gi|21229182|ref|NP_635104.1| - 2.9 7.8 8.1 5.6 6.9 0.3 3.6 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF641 PF04859.7 gi|21229182|ref|NP_635104.1| - 3.3 7.4 19.8 0.11 12.2 2.8 3.0 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) TMPIT PF07851.8 gi|21229182|ref|NP_635104.1| - 3.4 6.6 10.0 5.5 5.9 6.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein RIO1 PF01163.17 gi|21229183|ref|NP_635105.1| - 1.9e-43 148.0 0.1 1.9e-43 148.0 0.1 1.5 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.6 gi|21229183|ref|NP_635105.1| - 4.5e-29 100.3 0.0 9.9e-29 99.2 0.0 1.6 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.20 gi|21229183|ref|NP_635105.1| - 2e-05 23.8 0.0 4.6e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.18 gi|21229183|ref|NP_635105.1| - 0.00027 20.7 0.1 0.01 15.5 0.0 2.5 2 1 1 3 3 3 1 Phosphotransferase enzyme family Tbf5 PF06331.7 gi|21229183|ref|NP_635105.1| - 0.099 12.4 0.4 1.3 8.8 0.0 2.8 2 0 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 AAA_11 PF13086.1 gi|21229183|ref|NP_635105.1| - 2.7 7.4 5.6 32 3.9 3.9 2.1 1 1 0 1 1 1 0 AAA domain LRR_5 PF13306.1 gi|21229184|ref|NP_635106.1| - 0.005 16.5 0.1 0.011 15.4 0.1 1.5 1 0 0 1 1 1 1 Leucine rich repeats (6 copies) PKD PF00801.15 gi|21229184|ref|NP_635106.1| - 0.056 13.1 0.2 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 PKD domain LRR_6 PF13516.1 gi|21229184|ref|NP_635106.1| - 0.53 10.5 8.8 1.9 8.8 0.6 5.1 4 2 0 4 4 4 0 Leucine Rich repeat LRR_4 PF12799.2 gi|21229184|ref|NP_635106.1| - 1.6 8.4 10.8 0.69 9.6 0.5 4.6 4 1 0 4 4 4 0 Leucine Rich repeats (2 copies) Dfp1_Him1_M PF08630.5 gi|21229185|ref|NP_635107.1| - 0.025 14.3 2.2 0.031 14.0 1.5 1.1 1 0 0 1 1 1 0 Dfp1/Him1, central region IBD PF10416.4 gi|21229185|ref|NP_635107.1| - 0.055 13.2 1.4 0.055 13.2 1.0 1.9 1 1 0 2 2 2 0 Transcription-initiator DNA-binding domain IBD DUF3535 PF12054.3 gi|21229185|ref|NP_635107.1| - 0.38 9.3 3.6 0.44 9.1 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3535) TcdB_N PF12918.2 gi|21229185|ref|NP_635107.1| - 1.2 9.2 5.7 0.26 11.4 0.2 2.3 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain GAGA_bind PF06217.7 gi|21229185|ref|NP_635107.1| - 2.8 7.8 8.9 2.9 7.7 6.2 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family RP-C_C PF11800.3 gi|21229185|ref|NP_635107.1| - 6 6.5 6.0 7.5 6.1 4.2 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region DJ-1_PfpI PF01965.19 gi|21229186|ref|NP_635108.1| - 3.1e-40 137.0 0.0 3.6e-40 136.7 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|21229186|ref|NP_635108.1| - 2.2e-13 49.7 0.0 2.7e-13 49.5 0.0 1.0 1 0 0 1 1 1 1 Putative amidotransferase GATase PF00117.23 gi|21229186|ref|NP_635108.1| - 2e-05 24.1 0.0 2.3e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|21229186|ref|NP_635108.1| - 0.0092 15.5 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|21229186|ref|NP_635108.1| - 0.028 13.8 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 GATase_5 PF13507.1 gi|21229186|ref|NP_635108.1| - 0.038 12.8 0.0 0.064 12.1 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Cys_Met_Meta_PP PF01053.15 gi|21229187|ref|NP_635109.1| - 4.6e-151 502.5 0.0 5.2e-151 502.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.16 gi|21229187|ref|NP_635109.1| - 3.6e-08 32.7 0.1 5.3e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.6 gi|21229187|ref|NP_635109.1| - 4.3e-06 25.2 0.1 6e-05 21.5 0.1 2.0 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.14 gi|21229187|ref|NP_635109.1| - 1.9e-05 23.5 0.0 3.2e-05 22.8 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|21229187|ref|NP_635109.1| - 0.0055 15.8 0.1 0.017 14.2 0.1 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase NAPRTase PF04095.11 gi|21229188|ref|NP_635110.1| - 6.3e-56 189.3 0.0 8.7e-56 188.9 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family HisKA_3 PF07730.8 gi|21229188|ref|NP_635110.1| - 0.13 12.6 0.0 5 7.5 0.0 2.3 2 0 0 2 2 2 0 Histidine kinase PD40 PF07676.7 gi|21229189|ref|NP_635111.1| - 1.2e-26 91.9 13.0 1.8e-14 53.0 0.6 5.0 4 0 0 4 4 4 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.16 gi|21229189|ref|NP_635111.1| - 5.5e-06 25.2 1.7 0.0016 17.1 0.4 3.8 1 1 5 6 6 6 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.1 gi|21229189|ref|NP_635111.1| - 0.00035 19.1 0.4 0.59 8.5 0.0 3.3 3 1 1 4 4 4 3 Oligogalacturonate lyase Lipocalin_3 PF12702.2 gi|21229189|ref|NP_635111.1| - 0.014 15.3 0.1 0.39 10.7 0.0 2.9 2 0 0 2 2 2 0 Lipocalin-like Hexapep PF00132.19 gi|21229190|ref|NP_635112.1| - 6.9e-13 47.4 3.2 0.00091 18.6 0.0 4.6 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21229190|ref|NP_635112.1| - 1.4e-07 30.9 1.4 0.0044 16.5 0.0 4.7 5 0 0 5 5 5 2 Hexapeptide repeat of succinyl-transferase HEAT_2 PF13646.1 gi|21229192|ref|NP_635114.1| - 8.9e-93 304.7 25.0 4.3e-18 65.3 1.0 7.0 1 1 6 7 7 7 7 HEAT repeats HEAT PF02985.17 gi|21229192|ref|NP_635114.1| - 9.8e-48 155.9 1.2 0.00017 21.4 0.0 12.6 13 0 0 13 13 13 10 HEAT repeat HEAT_PBS PF03130.11 gi|21229192|ref|NP_635114.1| - 1e-44 146.4 20.7 0.0039 17.5 0.1 14.1 14 0 0 14 14 14 11 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|21229192|ref|NP_635114.1| - 1.8e-39 133.2 22.6 0.0026 18.2 0.1 12.4 8 3 4 12 12 12 8 HEAT-like repeat Arm PF00514.18 gi|21229192|ref|NP_635114.1| - 5.5e-17 60.8 4.4 0.32 10.8 0.0 9.3 8 2 2 10 10 9 3 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|21229192|ref|NP_635114.1| - 2.1e-11 42.8 0.5 2.8e-07 29.2 0.1 5.4 1 1 2 3 3 3 2 Adaptin N terminal region Cnd1 PF12717.2 gi|21229192|ref|NP_635114.1| - 2.3e-08 34.0 0.8 14 5.4 0.0 8.1 4 3 4 8 8 8 0 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.2 gi|21229192|ref|NP_635114.1| - 3e-06 27.5 0.0 7 7.1 0.0 6.8 4 1 3 7 7 7 0 Vacuolar 14 Fab1-binding region Aconitase_B_N PF11791.3 gi|21229192|ref|NP_635114.1| - 0.00028 20.7 5.5 1.6 8.5 0.0 6.1 3 1 6 9 9 9 1 Aconitate B N-terminal domain Cohesin_HEAT PF12765.2 gi|21229192|ref|NP_635114.1| - 0.00035 20.4 4.4 12 5.9 0.0 6.0 6 0 0 6 6 6 0 HEAT repeat associated with sister chromatid cohesion PPR_3 PF13812.1 gi|21229192|ref|NP_635114.1| - 0.00038 20.5 0.0 17 5.9 0.0 6.8 9 0 0 9 9 6 0 Pentatricopeptide repeat domain CLASP_N PF12348.3 gi|21229192|ref|NP_635114.1| - 0.00078 18.8 0.0 14 4.9 0.0 5.0 5 0 0 5 5 5 0 CLASP N terminal DUF1641 PF07849.6 gi|21229192|ref|NP_635114.1| - 0.00088 18.8 4.5 37 4.0 0.0 6.9 7 0 0 7 7 7 0 Protein of unknown function (DUF1641) RasGEF_N_2 PF14663.1 gi|21229192|ref|NP_635114.1| - 0.0016 18.3 2.1 53 3.7 0.0 5.8 5 1 1 7 7 7 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF1546 PF07571.8 gi|21229192|ref|NP_635114.1| - 0.0044 17.0 0.3 2.7 8.1 0.0 4.6 4 1 1 5 5 5 1 Protein of unknown function (DUF1546) CHAD PF05235.9 gi|21229192|ref|NP_635114.1| - 0.0053 16.3 4.9 0.052 13.1 0.8 3.0 2 1 1 3 3 3 1 CHAD domain Cnd3 PF12719.2 gi|21229192|ref|NP_635114.1| - 0.0091 15.0 0.6 4.1 6.2 0.0 4.8 2 1 4 6 6 6 1 Nuclear condensing complex subunits, C-term domain Proteasom_PSMB PF10508.4 gi|21229192|ref|NP_635114.1| - 0.019 13.2 0.6 0.16 10.2 0.1 2.6 2 1 0 2 2 2 0 Proteasome non-ATPase 26S subunit Pex19 PF04614.7 gi|21229192|ref|NP_635114.1| - 0.027 14.0 0.1 3.4 7.2 0.0 2.4 2 0 0 2 2 2 0 Pex19 protein family RICTOR_V PF14668.1 gi|21229192|ref|NP_635114.1| - 0.066 13.1 0.0 6.9 6.6 0.0 3.2 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 ERAP1_C PF11838.3 gi|21229192|ref|NP_635114.1| - 0.079 12.1 0.2 1.4 8.0 0.0 2.7 2 1 0 2 2 2 0 ERAP1-like C-terminal domain Urease_alpha PF00449.15 gi|21229192|ref|NP_635114.1| - 0.19 11.8 0.6 16 5.6 0.0 3.8 3 2 2 5 5 5 0 Urease alpha-subunit, N-terminal domain Ndc80_HEC PF03801.8 gi|21229192|ref|NP_635114.1| - 0.2 11.0 0.0 4.4 6.7 0.0 2.9 4 0 0 4 4 4 0 HEC/Ndc80p family zf-AD PF07776.10 gi|21229193|ref|NP_635115.1| - 0.027 14.4 0.3 0.41 10.6 0.0 2.6 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF2275 PF10039.4 gi|21229193|ref|NP_635115.1| - 0.03 14.2 1.1 0.036 13.9 0.2 1.6 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2275) CAMP_factor PF07373.6 gi|21229193|ref|NP_635115.1| - 0.044 13.2 9.8 0.3 10.5 0.1 3.2 2 1 1 3 3 3 0 CAMP factor (Cfa) DUF2762 PF10960.3 gi|21229193|ref|NP_635115.1| - 0.46 10.2 2.4 4.6 7.0 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2762) Reo_sigmaC PF04582.7 gi|21229193|ref|NP_635115.1| - 0.5 9.5 10.7 0.051 12.7 3.7 1.8 2 0 0 2 2 2 0 Reovirus sigma C capsid protein FlaC_arch PF05377.6 gi|21229193|ref|NP_635115.1| - 0.83 9.5 11.6 0.19 11.6 0.5 3.4 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Syntaxin-6_N PF09177.6 gi|21229193|ref|NP_635115.1| - 1 9.8 4.5 38 4.7 0.0 3.3 2 1 0 2 2 2 0 Syntaxin 6, N-terminal Fib_alpha PF08702.5 gi|21229193|ref|NP_635115.1| - 2.6 8.1 8.1 3.7 7.6 0.3 2.7 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Osmo_CC PF08946.5 gi|21229193|ref|NP_635115.1| - 3.3 7.8 6.2 26 4.9 0.1 3.2 3 0 0 3 3 3 0 Osmosensory transporter coiled coil IncA PF04156.9 gi|21229193|ref|NP_635115.1| - 5 6.6 11.2 0.83 9.2 1.9 2.5 2 1 0 2 2 2 0 IncA protein FlxA PF14282.1 gi|21229193|ref|NP_635115.1| - 5.4 7.0 12.3 4.4 7.2 0.7 3.3 2 1 1 3 3 3 0 FlxA-like protein AAA_13 PF13166.1 gi|21229193|ref|NP_635115.1| - 5.5 5.3 9.4 13 4.1 6.5 1.6 1 1 0 1 1 1 0 AAA domain NPV_P10 PF05531.7 gi|21229193|ref|NP_635115.1| - 6 7.1 12.4 5.4 7.3 0.3 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.7 gi|21229193|ref|NP_635115.1| - 9.2 6.0 8.5 1.2 8.8 0.5 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) HTH_20 PF12840.2 gi|21229194|ref|NP_635116.1| - 4.3e-12 45.6 0.1 6.4e-12 45.1 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21229194|ref|NP_635116.1| - 7.1e-06 25.3 2.6 1.6e-05 24.1 1.8 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|21229194|ref|NP_635116.1| - 0.00041 20.0 0.4 0.00096 18.8 0.3 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.1 gi|21229194|ref|NP_635116.1| - 0.0015 18.0 0.1 0.058 13.0 0.0 2.5 2 0 0 2 2 2 1 Homeodomain-like domain TFIIE_alpha PF02002.12 gi|21229194|ref|NP_635116.1| - 0.0033 16.9 1.2 0.0042 16.5 0.8 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_5 PF01022.15 gi|21229194|ref|NP_635116.1| - 0.0055 16.3 0.4 0.0055 16.3 0.3 2.3 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_30 PF13556.1 gi|21229194|ref|NP_635116.1| - 0.019 14.5 0.0 0.033 13.7 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_7 PF02796.10 gi|21229194|ref|NP_635116.1| - 0.035 13.9 0.2 0.14 12.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_38 PF13936.1 gi|21229194|ref|NP_635116.1| - 0.038 13.5 0.1 0.079 12.5 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.2 gi|21229194|ref|NP_635116.1| - 0.04 13.5 0.1 0.066 12.8 0.1 1.3 1 0 0 1 1 1 0 MarR family MarR PF01047.17 gi|21229194|ref|NP_635116.1| - 0.076 12.7 0.2 0.14 11.9 0.2 1.4 1 0 0 1 1 1 0 MarR family Sigma70_r4_2 PF08281.7 gi|21229194|ref|NP_635116.1| - 0.079 12.4 0.1 0.23 10.9 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_28 PF13518.1 gi|21229194|ref|NP_635116.1| - 0.11 12.5 0.1 0.25 11.3 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF742 PF05331.6 gi|21229194|ref|NP_635116.1| - 0.12 11.9 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF742) CarboxypepD_reg PF13620.1 gi|21229196|ref|NP_635118.1| - 3.2e-06 27.0 0.0 6e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|21229196|ref|NP_635118.1| - 8.4e-05 22.5 0.2 0.00032 20.6 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4480) MarR_2 PF12802.2 gi|21229196|ref|NP_635118.1| - 0.001 18.6 0.0 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|21229196|ref|NP_635118.1| - 0.0013 18.3 0.1 0.0026 17.4 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21229196|ref|NP_635118.1| - 0.0023 17.2 0.5 0.0037 16.6 0.3 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21229196|ref|NP_635118.1| - 0.063 13.6 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain FeoC PF09012.5 gi|21229196|ref|NP_635118.1| - 0.079 12.6 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator ABC_tran PF00005.22 gi|21229197|ref|NP_635119.1| - 6.8e-32 110.6 0.0 1e-31 110.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|21229197|ref|NP_635119.1| - 2.2e-13 50.8 1.2 1.8e-12 47.8 0.8 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|21229197|ref|NP_635119.1| - 2.2e-07 30.3 0.0 8.9e-07 28.3 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_18 PF13238.1 gi|21229197|ref|NP_635119.1| - 0.00023 21.4 1.4 0.029 14.6 1.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|21229197|ref|NP_635119.1| - 0.00034 20.1 0.0 0.00047 19.6 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain AAA_17 PF13207.1 gi|21229197|ref|NP_635119.1| - 0.00047 20.9 0.5 0.0029 18.4 0.3 2.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21229197|ref|NP_635119.1| - 0.00051 19.5 0.0 0.00088 18.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21229197|ref|NP_635119.1| - 0.00073 19.5 0.6 0.0027 17.7 0.4 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|21229197|ref|NP_635119.1| - 0.0011 18.1 0.0 0.0021 17.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|21229197|ref|NP_635119.1| - 0.0013 17.8 0.1 0.054 12.5 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.1 gi|21229197|ref|NP_635119.1| - 0.0014 18.5 0.0 0.0035 17.2 0.0 1.7 2 1 0 2 2 1 1 AAA domain Arch_ATPase PF01637.13 gi|21229197|ref|NP_635119.1| - 0.0028 17.3 0.2 0.013 15.1 0.0 2.2 1 1 1 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|21229197|ref|NP_635119.1| - 0.0057 16.7 0.1 0.023 14.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|21229197|ref|NP_635119.1| - 0.0071 16.2 0.4 0.025 14.5 0.3 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.1 gi|21229197|ref|NP_635119.1| - 0.0073 15.7 0.0 0.019 14.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_13 PF13166.1 gi|21229197|ref|NP_635119.1| - 0.01 14.3 0.0 0.92 7.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|21229197|ref|NP_635119.1| - 0.014 15.2 0.0 0.025 14.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|21229197|ref|NP_635119.1| - 0.056 12.3 0.0 0.095 11.5 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_23 PF13476.1 gi|21229197|ref|NP_635119.1| - 0.07 13.4 1.6 0.16 12.2 0.0 2.1 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|21229197|ref|NP_635119.1| - 0.076 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase G-alpha PF00503.15 gi|21229197|ref|NP_635119.1| - 0.082 11.5 0.0 0.094 11.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_19 PF13245.1 gi|21229197|ref|NP_635119.1| - 0.15 11.8 0.0 0.4 10.4 0.0 1.7 2 0 0 2 2 1 0 Part of AAA domain NPCBM_assoc PF10633.4 gi|21229198|ref|NP_635120.1| - 2.5e-09 37.0 0.4 0.00073 19.5 0.0 3.3 3 0 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|21229198|ref|NP_635120.1| - 9.4e-09 35.2 2.1 2.8e-05 24.0 0.8 2.4 2 0 0 2 2 2 2 Domain of unknown function DUF11 CARDB PF07705.6 gi|21229198|ref|NP_635120.1| - 0.00019 21.4 3.6 0.0022 18.0 1.5 2.7 1 1 1 2 2 2 1 CARDB A2M_N PF01835.14 gi|21229198|ref|NP_635120.1| - 0.00032 20.8 0.1 0.00064 19.9 0.0 1.5 1 1 0 1 1 1 1 MG2 domain A2M PF00207.17 gi|21229198|ref|NP_635120.1| - 0.014 14.9 0.3 0.076 12.5 0.0 2.2 3 0 0 3 3 3 0 Alpha-2-macroglobulin family Guanylate_kin PF00625.16 gi|21229198|ref|NP_635120.1| - 0.017 14.5 0.1 0.029 13.7 0.1 1.4 1 0 0 1 1 1 0 Guanylate kinase Flocculin PF00624.13 gi|21229198|ref|NP_635120.1| - 0.028 14.2 5.5 0.072 12.9 3.8 1.7 1 0 0 1 1 1 0 Flocculin repeat PLAT PF01477.18 gi|21229198|ref|NP_635120.1| - 0.051 13.9 1.0 0.11 12.8 0.3 1.8 2 0 0 2 2 2 0 PLAT/LH2 domain Arrestin_C PF02752.17 gi|21229198|ref|NP_635120.1| - 0.07 13.2 0.2 0.1 12.7 0.1 1.5 1 1 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain Cohesin PF00963.13 gi|21229198|ref|NP_635120.1| - 0.081 12.7 3.6 0.16 11.8 2.5 1.7 1 1 0 1 1 1 0 Cohesin domain OsmC PF02566.14 gi|21229198|ref|NP_635120.1| - 0.12 12.6 0.0 0.35 11.0 0.0 1.8 2 0 0 2 2 2 0 OsmC-like protein Reeler PF02014.11 gi|21229198|ref|NP_635120.1| - 0.17 12.1 0.6 13 6.0 0.1 2.8 1 1 1 2 2 2 0 Reeler domain DUF2393 PF09624.5 gi|21229198|ref|NP_635120.1| - 0.22 11.0 1.6 0.52 9.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) DUF1573 PF07610.6 gi|21229198|ref|NP_635120.1| - 1.4 8.5 4.5 7.5 6.2 0.1 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF1573) NPCBM_assoc PF10633.4 gi|21229199|ref|NP_635121.1| - 0.0015 18.5 0.1 0.54 10.3 0.0 2.5 2 0 0 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4458 PF14660.1 gi|21229199|ref|NP_635121.1| - 0.0026 17.7 0.2 0.0062 16.5 0.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4458) DUF4366 PF14283.1 gi|21229199|ref|NP_635121.1| - 0.011 15.1 0.3 0.029 13.8 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4366) CARDB PF07705.6 gi|21229199|ref|NP_635121.1| - 0.015 15.3 5.1 0.057 13.4 0.6 2.5 2 0 0 2 2 2 0 CARDB DUF2271 PF10029.4 gi|21229199|ref|NP_635121.1| - 0.11 11.9 0.5 1.3 8.5 0.0 2.5 3 0 0 3 3 3 0 Predicted periplasmic protein (DUF2271) MacB_PCD PF12704.2 gi|21229200|ref|NP_635122.1| - 6e-45 153.6 3.1 6e-45 153.6 2.2 2.6 3 0 0 3 3 3 2 MacB-like periplasmic core domain FtsX PF02687.16 gi|21229200|ref|NP_635122.1| - 4.4e-23 81.3 16.3 3.1e-22 78.5 7.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family DUF4134 PF13572.1 gi|21229200|ref|NP_635122.1| - 0.026 14.6 1.2 0.026 14.6 0.8 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF4134) Yip1 PF04893.12 gi|21229200|ref|NP_635122.1| - 0.26 10.7 15.9 0.72 9.3 8.2 2.3 2 0 0 2 2 2 0 Yip1 domain CHASE4 PF05228.8 gi|21229201|ref|NP_635123.1| - 1.3e-42 145.0 0.0 2.7e-42 144.0 0.0 1.5 1 0 0 1 1 1 1 CHASE4 domain HATPase_c PF02518.21 gi|21229201|ref|NP_635123.1| - 1e-31 108.9 0.1 1.7e-31 108.1 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21229201|ref|NP_635123.1| - 5.4e-20 71.1 0.2 4.9e-19 68.0 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|21229201|ref|NP_635123.1| - 3.9e-06 26.8 0.0 8.7e-05 22.5 0.0 2.3 1 1 0 1 1 1 1 PAS fold HATPase_c_5 PF14501.1 gi|21229201|ref|NP_635123.1| - 8e-06 25.4 0.0 2.2e-05 24.0 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.1 gi|21229201|ref|NP_635123.1| - 0.013 15.2 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|21229201|ref|NP_635123.1| - 0.025 14.2 0.1 0.047 13.3 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|21229201|ref|NP_635123.1| - 0.24 11.6 0.0 0.24 11.6 0.0 1.7 2 0 0 2 2 2 0 HAMP domain CxxCxxCC PF03692.10 gi|21229202|ref|NP_635124.1| - 4.2e-06 27.1 1.6 1.3e-05 25.6 0.5 2.2 2 1 1 3 3 3 1 Putative zinc- or iron-chelating domain CHASE4 PF05228.8 gi|21229203|ref|NP_635125.1| - 2.1e-47 160.6 0.0 5.1e-47 159.4 0.0 1.7 1 0 0 1 1 1 1 CHASE4 domain HATPase_c PF02518.21 gi|21229203|ref|NP_635125.1| - 1.6e-32 111.4 0.1 3.4e-32 110.4 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21229203|ref|NP_635125.1| - 2e-21 75.7 0.0 7.3e-21 73.9 0.0 2.1 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|21229203|ref|NP_635125.1| - 3.7e-15 55.8 0.0 7.4e-15 54.9 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|21229203|ref|NP_635125.1| - 3.7e-08 33.6 0.0 1.2e-07 31.9 0.0 2.0 2 0 0 2 2 1 1 PAS domain HATPase_c_5 PF14501.1 gi|21229203|ref|NP_635125.1| - 1.9e-05 24.2 0.2 0.00013 21.6 0.0 2.5 2 1 1 3 3 3 1 GHKL domain PAS_10 PF13596.1 gi|21229203|ref|NP_635125.1| - 0.00048 20.3 0.0 0.002 18.3 0.0 2.1 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.1 gi|21229203|ref|NP_635125.1| - 0.0056 16.3 0.0 0.014 15.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|21229203|ref|NP_635125.1| - 0.0062 16.6 0.0 0.017 15.3 0.0 1.7 1 0 0 1 1 1 1 HAMP domain PAS_8 PF13188.1 gi|21229203|ref|NP_635125.1| - 0.0064 16.3 0.1 0.03 14.1 0.0 2.2 2 0 0 2 2 1 1 PAS domain STN1_2 PF09170.5 gi|21229203|ref|NP_635125.1| - 0.038 13.7 1.2 0.16 11.7 0.1 2.3 2 0 0 2 2 2 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 H_kinase_N PF12282.3 gi|21229203|ref|NP_635125.1| - 0.11 12.1 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Signal transduction histidine kinase Ly49 PF08391.5 gi|21229203|ref|NP_635125.1| - 0.42 10.7 3.1 25 5.0 0.1 3.0 3 0 0 3 3 3 0 Ly49-like protein, N-terminal region DUF1638 PF07796.6 gi|21229204|ref|NP_635126.1| - 5.5e-42 143.2 0.0 7.2e-42 142.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Pyridox_oxidase PF01243.15 gi|21229206|ref|NP_635128.1| - 3.5e-20 71.8 0.0 4.3e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxase_2 PF12766.2 gi|21229206|ref|NP_635128.1| - 0.019 15.2 0.0 0.028 14.7 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|21229206|ref|NP_635128.1| - 0.087 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) dCMP_cyt_deam_1 PF00383.17 gi|21229207|ref|NP_635129.1| - 7.4e-12 44.8 0.0 1.1e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region DDE_Tnp_IS66_C PF13817.1 gi|21229207|ref|NP_635129.1| - 0.048 13.6 0.5 0.097 12.6 0.3 1.5 1 0 0 1 1 1 0 IS66 C-terminal element Fasciclin PF02469.17 gi|21229208|ref|NP_635130.1| - 8.6e-38 129.2 0.0 1.1e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Fasciclin domain Pyridox_oxidase PF01243.15 gi|21229209|ref|NP_635131.1| - 6.1e-22 77.4 0.0 8.3e-22 77.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.2 gi|21229209|ref|NP_635131.1| - 5e-08 32.8 0.0 6.6e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.1 gi|21229209|ref|NP_635131.1| - 0.0036 17.0 0.0 0.0057 16.4 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Exonuc_VIII PF06630.6 gi|21229209|ref|NP_635131.1| - 0.066 12.5 0.1 6.6 6.0 0.0 2.1 2 0 0 2 2 2 0 Enterobacterial exodeoxyribonuclease VIII DUF2846 PF11008.3 gi|21229209|ref|NP_635131.1| - 0.14 12.0 0.0 0.28 11.0 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2846) PAS_3 PF08447.6 gi|21229210|ref|NP_635132.1| - 1.4e-18 66.7 0.2 2.2e-18 66.1 0.1 1.3 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.1 gi|21229210|ref|NP_635132.1| - 7.3e-14 52.4 0.0 1.3e-13 51.7 0.0 1.3 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.1 gi|21229210|ref|NP_635132.1| - 9.8e-07 28.9 0.0 1.6e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.1 gi|21229210|ref|NP_635132.1| - 1.3e-05 25.5 0.1 2e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|21229210|ref|NP_635132.1| - 0.0011 18.9 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS PF00989.19 gi|21229210|ref|NP_635132.1| - 0.058 13.1 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 PAS fold Phosphorylase PF00343.15 gi|21229211|ref|NP_635133.1| - 4.1e-23 81.1 0.0 1.1e-16 60.0 0.0 3.0 3 0 0 3 3 3 2 Carbohydrate phosphorylase Glyco_transf_5 PF08323.6 gi|21229211|ref|NP_635133.1| - 0.016 14.7 0.0 0.028 13.8 0.0 1.5 1 0 0 1 1 1 0 Starch synthase catalytic domain TPR_1 PF00515.23 gi|21229212|ref|NP_635134.1| - 1.7e-42 141.3 13.2 1.3e-07 30.8 0.3 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21229212|ref|NP_635134.1| - 1.3e-40 136.9 8.8 2.4e-14 52.7 0.0 4.4 3 1 1 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|21229212|ref|NP_635134.1| - 2.1e-39 130.2 17.4 4.9e-07 29.1 0.0 7.0 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21229212|ref|NP_635134.1| - 3.3e-37 126.3 12.5 5e-11 42.9 1.6 4.7 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21229212|ref|NP_635134.1| - 2.3e-29 98.9 6.1 7.4e-07 28.5 0.0 6.7 6 1 1 7 7 6 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21229212|ref|NP_635134.1| - 7.7e-29 97.4 6.6 6e-05 22.9 0.0 6.8 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21229212|ref|NP_635134.1| - 6.3e-22 77.3 8.1 2e-06 27.6 0.0 5.1 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21229212|ref|NP_635134.1| - 1.5e-20 71.8 11.1 7.7e-06 26.0 0.0 6.9 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21229212|ref|NP_635134.1| - 1.9e-18 66.5 8.2 6.7e-07 29.5 0.5 4.0 3 1 2 5 5 4 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21229212|ref|NP_635134.1| - 2.3e-16 59.3 0.0 2.7e-05 23.9 0.0 4.4 2 1 3 5 5 5 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|21229212|ref|NP_635134.1| - 2.2e-15 56.5 4.5 6e-06 26.3 0.1 3.1 3 1 1 4 4 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|21229212|ref|NP_635134.1| - 3.7e-14 51.3 1.4 7.8e-05 22.1 0.0 5.5 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21229212|ref|NP_635134.1| - 1.9e-12 46.7 3.5 0.017 15.5 0.0 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_15 PF13429.1 gi|21229212|ref|NP_635134.1| - 6.5e-07 28.6 2.2 0.2 10.7 0.0 3.9 2 2 2 4 4 4 3 Tetratricopeptide repeat NARP1 PF12569.3 gi|21229212|ref|NP_635134.1| - 7.1e-07 28.3 1.5 0.005 15.6 0.0 2.3 1 1 0 2 2 2 2 NMDA receptor-regulated protein 1 ChAPs PF09295.5 gi|21229212|ref|NP_635134.1| - 2.3e-06 26.6 0.1 0.014 14.2 0.0 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_20 PF14561.1 gi|21229212|ref|NP_635134.1| - 3.6e-06 26.9 2.8 0.14 12.2 0.0 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21229212|ref|NP_635134.1| - 8.2e-06 25.5 1.0 0.079 12.9 0.2 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21229212|ref|NP_635134.1| - 1.4e-05 24.8 0.9 0.3 10.9 0.0 3.7 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TOM20_plant PF06552.7 gi|21229212|ref|NP_635134.1| - 0.00068 19.2 3.0 0.022 14.3 0.4 3.0 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 Apc5 PF12862.2 gi|21229212|ref|NP_635134.1| - 0.0012 18.6 1.0 1.6 8.6 0.0 3.4 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 5 BTAD PF03704.12 gi|21229212|ref|NP_635134.1| - 0.0014 18.9 6.4 0.015 15.6 0.2 3.3 3 2 0 3 3 2 1 Bacterial transcriptional activator domain DUF3856 PF12968.2 gi|21229212|ref|NP_635134.1| - 0.0029 17.4 5.9 0.26 11.1 0.0 4.3 2 2 3 5 5 5 1 Domain of Unknown Function (DUF3856) Rapsyn_N PF10579.4 gi|21229212|ref|NP_635134.1| - 0.01 15.5 0.2 10 5.9 0.0 3.3 2 1 1 3 3 3 0 Rapsyn N-terminal myristoylation and linker region FliD_C PF07195.7 gi|21229212|ref|NP_635134.1| - 0.03 13.6 0.0 0.05 12.9 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus TPR_4 PF07721.9 gi|21229212|ref|NP_635134.1| - 0.031 14.6 0.2 12 6.6 0.0 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TruB_N PF01509.13 gi|21229212|ref|NP_635134.1| - 0.038 14.1 0.0 0.15 12.1 0.0 1.9 2 0 0 2 2 2 0 TruB family pseudouridylate synthase (N terminal domain) DUF3808 PF10300.4 gi|21229212|ref|NP_635134.1| - 0.05 12.1 0.8 1.3 7.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3808) PPR PF01535.15 gi|21229212|ref|NP_635134.1| - 0.16 11.9 4.7 1.5 8.9 0.0 4.4 5 0 0 5 5 4 0 PPR repeat TPR_21 PF09976.4 gi|21229212|ref|NP_635134.1| - 0.26 11.2 3.7 2.8 7.8 0.1 3.3 3 1 0 3 3 2 0 Tetratricopeptide repeat I-set PF07679.11 gi|21229213|ref|NP_635135.1| - 0.0073 16.1 1.9 5.4 6.9 0.0 4.4 4 2 0 4 4 4 2 Immunoglobulin I-set domain DUF11 PF01345.13 gi|21229213|ref|NP_635135.1| - 0.031 14.3 7.7 2.3 8.3 0.0 3.9 2 1 2 4 4 4 0 Domain of unknown function DUF11 Lantibiotic_a PF14867.1 gi|21229213|ref|NP_635135.1| - 5 6.4 7.1 15 4.9 0.4 2.8 2 0 0 2 2 2 0 Lantibiotic alpha MatE PF01554.13 gi|21229214|ref|NP_635136.1| - 0.014 15.0 2.2 0.017 14.7 1.5 1.1 1 0 0 1 1 1 0 MatE DUF2167 PF09935.4 gi|21229214|ref|NP_635136.1| - 0.41 9.4 2.2 0.48 9.2 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2167) Myc_target_1 PF15179.1 gi|21229214|ref|NP_635136.1| - 0.59 9.6 1.9 0.69 9.4 1.3 1.1 1 0 0 1 1 1 0 Myc target protein 1 TM2 PF05154.11 gi|21229214|ref|NP_635136.1| - 0.76 10.0 7.7 1.5 9.0 5.3 1.6 1 1 0 1 1 1 0 TM2 domain Peptidase_M3 PF01432.15 gi|21229215|ref|NP_635137.1| - 1.8e-29 103.1 6.2 2.7e-29 102.5 4.3 1.3 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.5 gi|21229215|ref|NP_635137.1| - 2e-05 24.5 0.6 0.00012 22.0 0.1 2.7 2 0 0 2 2 2 1 Oligopeptidase F SCAN PF02023.12 gi|21229215|ref|NP_635137.1| - 0.099 12.1 0.7 0.36 10.3 0.1 2.2 2 0 0 2 2 2 0 SCAN domain Peptidase_M50B PF13398.1 gi|21229215|ref|NP_635137.1| - 0.26 10.6 0.0 0.43 9.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase M50B-like TM2 PF05154.11 gi|21229216|ref|NP_635138.1| - 1.6 9.0 12.5 17 5.7 8.7 2.0 1 1 0 1 1 1 0 TM2 domain Fic PF02661.13 gi|21229217|ref|NP_635139.1| - 5.8e-21 74.9 0.0 4.3e-20 72.1 0.0 2.3 2 0 0 2 2 2 1 Fic/DOC family HTH_DeoR PF08220.7 gi|21229217|ref|NP_635139.1| - 4.6e-05 22.8 0.0 0.00013 21.3 0.0 1.8 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF4172 PF13776.1 gi|21229217|ref|NP_635139.1| - 0.00049 20.1 0.1 0.0014 18.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) Fic_N PF13784.1 gi|21229217|ref|NP_635139.1| - 0.0015 18.3 0.3 0.0047 16.7 0.2 1.8 1 0 0 1 1 1 1 Fic/DOC family N-terminal HTH_11 PF08279.7 gi|21229217|ref|NP_635139.1| - 0.002 17.7 0.0 0.0069 16.0 0.0 2.0 1 0 0 1 1 1 1 HTH domain TrmB PF01978.14 gi|21229217|ref|NP_635139.1| - 0.0022 17.6 0.8 0.0094 15.6 0.1 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|21229217|ref|NP_635139.1| - 0.0035 16.9 0.0 0.039 13.5 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain LexA_DNA_bind PF01726.11 gi|21229217|ref|NP_635139.1| - 0.017 14.6 0.3 0.067 12.7 0.0 2.1 2 0 0 2 2 2 0 LexA DNA binding domain MarR_2 PF12802.2 gi|21229217|ref|NP_635139.1| - 0.024 14.2 0.2 0.096 12.3 0.0 2.1 3 0 0 3 3 3 0 MarR family Peptidase_U35_2 PF14550.1 gi|21229217|ref|NP_635139.1| - 0.035 13.7 0.0 0.093 12.3 0.0 1.7 1 0 0 1 1 1 0 Putative phage protease XkdF HTH_27 PF13463.1 gi|21229217|ref|NP_635139.1| - 0.04 14.2 0.0 0.2 11.9 0.0 2.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|21229217|ref|NP_635139.1| - 0.045 13.5 0.0 0.64 9.8 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Penicillinase_R PF03965.11 gi|21229217|ref|NP_635139.1| - 0.058 13.4 0.8 0.22 11.6 0.0 2.4 2 1 0 2 2 2 0 Penicillinase repressor FaeA PF04703.7 gi|21229217|ref|NP_635139.1| - 0.06 13.5 0.3 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 FaeA-like protein DSPc PF00782.15 gi|21229218|ref|NP_635140.1| - 1.2e-06 28.0 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.22 gi|21229218|ref|NP_635140.1| - 0.00032 20.1 0.0 0.00042 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.1 gi|21229218|ref|NP_635140.1| - 0.00049 20.3 0.0 0.00068 19.9 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family PTPlike_phytase PF14566.1 gi|21229218|ref|NP_635140.1| - 0.07 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate MarR PF01047.17 gi|21229219|ref|NP_635141.1| - 1.3e-10 40.8 0.0 2.8e-10 39.7 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.2 gi|21229219|ref|NP_635141.1| - 3.8e-10 39.2 0.0 7.1e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21229219|ref|NP_635141.1| - 5.3e-08 33.0 0.0 1.9e-07 31.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|21229219|ref|NP_635141.1| - 0.00016 21.5 0.0 0.00037 20.3 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|21229219|ref|NP_635141.1| - 0.002 17.7 0.0 0.0045 16.6 0.0 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|21229219|ref|NP_635141.1| - 0.0052 16.1 0.0 0.017 14.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding KIP1 PF07765.7 gi|21229219|ref|NP_635141.1| - 0.012 15.4 0.1 0.1 12.4 0.0 2.1 2 0 0 2 2 2 0 KIP1-like protein HTH_5 PF01022.15 gi|21229219|ref|NP_635141.1| - 0.028 14.0 0.2 3.8 7.2 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family RAG1 PF12940.2 gi|21229219|ref|NP_635141.1| - 0.04 12.2 0.1 0.047 12.0 0.1 1.2 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1) FeoC PF09012.5 gi|21229219|ref|NP_635141.1| - 0.053 13.2 0.2 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 FeoC like transcriptional regulator Penicillinase_R PF03965.11 gi|21229219|ref|NP_635141.1| - 0.065 13.3 0.3 0.3 11.1 0.2 1.9 1 1 0 1 1 1 0 Penicillinase repressor Lon_C PF05362.8 gi|21229220|ref|NP_635142.1| - 7.4e-90 299.7 1.7 1.7e-89 298.5 1.1 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.24 gi|21229220|ref|NP_635142.1| - 2.7e-21 76.1 0.0 1.5e-20 73.7 0.0 2.4 3 0 0 3 3 1 1 ATPase family associated with various cellular activities (AAA) LON PF02190.11 gi|21229220|ref|NP_635142.1| - 7.5e-16 58.4 0.4 1.7e-15 57.2 0.2 1.6 1 0 0 1 1 1 1 ATP-dependent protease La (LON) domain ChlI PF13541.1 gi|21229220|ref|NP_635142.1| - 6.9e-11 41.7 0.2 2.8e-10 39.7 0.0 2.1 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|21229220|ref|NP_635142.1| - 4.9e-09 36.0 0.0 1.1e-07 31.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|21229220|ref|NP_635142.1| - 6.8e-06 26.9 0.6 0.00047 20.9 0.2 3.5 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|21229220|ref|NP_635142.1| - 6.9e-06 26.1 0.1 3.8e-05 23.7 0.1 2.2 2 1 0 2 2 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|21229220|ref|NP_635142.1| - 1.4e-05 25.2 0.0 0.00054 20.1 0.0 2.7 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.12 gi|21229220|ref|NP_635142.1| - 0.0001 21.8 0.3 0.00082 18.8 0.0 2.5 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.1 gi|21229220|ref|NP_635142.1| - 0.00012 21.7 1.3 0.00033 20.3 0.1 2.2 2 0 0 2 2 2 1 Part of AAA domain RuvB_N PF05496.7 gi|21229220|ref|NP_635142.1| - 0.00014 20.9 0.1 0.00047 19.2 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_PrkA PF08298.6 gi|21229220|ref|NP_635142.1| - 0.00026 19.8 0.0 0.00057 18.6 0.0 1.5 1 0 0 1 1 1 1 PrkA AAA domain Birna_VP4 PF01768.11 gi|21229220|ref|NP_635142.1| - 0.00039 19.5 0.2 0.00085 18.4 0.2 1.5 1 0 0 1 1 1 1 Birnavirus VP4 protein UPF0079 PF02367.12 gi|21229220|ref|NP_635142.1| - 0.00067 19.2 1.0 0.0029 17.2 0.1 2.2 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Rad17 PF03215.10 gi|21229220|ref|NP_635142.1| - 0.0014 17.4 0.1 0.0027 16.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|21229220|ref|NP_635142.1| - 0.0024 18.1 6.6 0.017 15.4 0.1 3.9 3 1 0 3 3 3 1 AAA domain AAA_3 PF07726.6 gi|21229220|ref|NP_635142.1| - 0.0026 17.3 0.0 0.018 14.6 0.0 2.4 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|21229220|ref|NP_635142.1| - 0.0051 16.7 0.0 0.016 15.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.8 gi|21229220|ref|NP_635142.1| - 0.0071 15.2 0.0 0.024 13.5 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.1 gi|21229220|ref|NP_635142.1| - 0.0084 15.9 0.0 0.025 14.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.13 gi|21229220|ref|NP_635142.1| - 0.0088 15.5 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase TIP49 PF06068.8 gi|21229220|ref|NP_635142.1| - 0.012 14.3 0.1 0.012 14.3 0.1 2.8 3 0 0 3 3 3 0 TIP49 C-terminus Zeta_toxin PF06414.7 gi|21229220|ref|NP_635142.1| - 0.016 14.3 0.2 0.047 12.7 0.1 1.8 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.1 gi|21229220|ref|NP_635142.1| - 0.017 14.6 0.1 0.049 13.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|21229220|ref|NP_635142.1| - 0.019 14.5 0.0 0.16 11.6 0.0 2.2 2 0 0 2 2 2 0 NACHT domain NTPase_1 PF03266.10 gi|21229220|ref|NP_635142.1| - 0.024 14.3 4.2 0.081 12.6 0.0 3.6 3 1 1 4 4 4 0 NTPase AAA_28 PF13521.1 gi|21229220|ref|NP_635142.1| - 0.03 14.2 0.6 0.083 12.8 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.1 gi|21229220|ref|NP_635142.1| - 0.038 13.3 0.1 0.085 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|21229220|ref|NP_635142.1| - 0.042 14.0 0.0 0.15 12.2 0.0 2.0 2 0 0 2 2 1 0 RNA helicase AAA_24 PF13479.1 gi|21229220|ref|NP_635142.1| - 0.055 13.0 0.5 0.13 11.8 0.4 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|21229220|ref|NP_635142.1| - 0.11 11.6 0.3 0.35 10.0 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.22 gi|21229220|ref|NP_635142.1| - 0.16 12.2 1.2 0.67 10.2 0.1 2.4 2 0 0 2 2 2 0 ABC transporter AAA_11 PF13086.1 gi|21229220|ref|NP_635142.1| - 3.3 7.2 6.1 0.47 9.9 0.1 2.3 1 1 1 2 2 2 0 AAA domain FMN_red PF03358.10 gi|21229221|ref|NP_635143.1| - 1.8e-21 76.2 0.0 2.5e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|21229221|ref|NP_635143.1| - 5e-13 49.0 0.0 6.1e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|21229221|ref|NP_635143.1| - 0.003 17.5 0.0 0.0053 16.7 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|21229221|ref|NP_635143.1| - 0.073 12.4 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin PIN PF01850.16 gi|21229222|ref|NP_635144.1| - 1.6e-14 54.2 0.2 1.9e-14 54.0 0.1 1.0 1 0 0 1 1 1 1 PIN domain EF-hand_like PF09279.6 gi|21229222|ref|NP_635144.1| - 0.083 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide-specific phospholipase C, efhand-like PH_8 PF15409.1 gi|21229222|ref|NP_635144.1| - 0.13 12.3 0.3 0.88 9.6 0.0 2.0 1 1 1 2 2 2 0 Pleckstrin homology domain MFS_1 PF07690.11 gi|21229223|ref|NP_635145.1| - 2.3e-46 158.1 44.4 2.3e-46 158.1 30.7 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|21229223|ref|NP_635145.1| - 3.5e-08 32.4 13.3 3.5e-08 32.4 9.3 3.0 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|21229223|ref|NP_635145.1| - 6.2e-08 31.2 15.4 8.4e-08 30.7 10.7 1.3 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.1 gi|21229223|ref|NP_635145.1| - 1.5e-06 26.8 24.8 1.5e-06 26.8 17.2 2.8 1 1 1 2 2 2 1 MFS/sugar transport protein Abhydrolase_6 PF12697.2 gi|21229224|ref|NP_635146.1| - 9.5e-17 61.6 0.0 6.7e-16 58.8 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|21229224|ref|NP_635146.1| - 5e-13 49.1 0.0 7.6e-13 48.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|21229224|ref|NP_635146.1| - 3.8e-06 26.7 0.0 8.9e-06 25.5 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.15 gi|21229224|ref|NP_635146.1| - 0.003 17.7 0.0 0.0041 17.3 0.0 1.4 1 1 0 1 1 1 1 Thioesterase domain DLH PF01738.13 gi|21229224|ref|NP_635146.1| - 0.008 15.4 0.0 0.21 10.8 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family FSH1 PF03959.8 gi|21229224|ref|NP_635146.1| - 0.017 14.5 0.0 0.035 13.5 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Sugar-bind PF04198.8 gi|21229224|ref|NP_635146.1| - 0.053 12.4 0.0 0.071 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative sugar-binding domain Lipase_3 PF01764.20 gi|21229224|ref|NP_635146.1| - 0.079 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) GHMP_kinases_C PF08544.8 gi|21229224|ref|NP_635146.1| - 0.15 12.3 0.1 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 GHMP kinases C terminal DUF4316 PF14195.1 gi|21229224|ref|NP_635146.1| - 0.15 12.1 0.1 2.9 8.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4316) LysE PF01810.13 gi|21229225|ref|NP_635147.1| - 6.3e-32 110.3 13.2 7.6e-32 110.1 9.2 1.1 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.11 gi|21229225|ref|NP_635147.1| - 0.0089 15.4 8.5 0.075 12.4 5.9 2.3 1 1 0 1 1 1 1 Integral membrane protein TerC family Sulfate_tra_GLY PF13792.1 gi|21229225|ref|NP_635147.1| - 0.0098 15.5 1.3 0.026 14.1 0.9 1.7 1 0 0 1 1 1 1 Sulfate transporter N-terminal domain with GLY motif DUF1418 PF07214.7 gi|21229225|ref|NP_635147.1| - 0.14 11.8 0.8 0.31 10.6 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) Cas_Cas1 PF01867.11 gi|21229227|ref|NP_635149.1| - 1.8e-21 76.4 0.0 3e-21 75.7 0.0 1.4 1 0 0 1 1 1 1 CRISPR associated protein Cas1 ER PF01133.12 gi|21229227|ref|NP_635149.1| - 0.064 12.9 0.0 0.16 11.6 0.0 1.7 1 0 0 1 1 1 0 Enhancer of rudimentary DUF3303 PF11746.3 gi|21229229|ref|NP_635151.1| - 0.00013 22.2 0.0 0.00017 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) PAP2 PF01569.16 gi|21229230|ref|NP_635152.1| - 5.1e-19 68.2 8.6 5.1e-19 68.2 6.0 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.1 gi|21229230|ref|NP_635152.1| - 0.093 12.2 5.7 0.22 11.0 4.0 1.7 1 1 0 1 1 1 0 PAP2 superfamily PsaX PF08078.7 gi|21229230|ref|NP_635152.1| - 0.26 11.2 5.0 0.96 9.4 0.8 3.2 3 0 0 3 3 3 0 PsaX family DUF3488 PF11992.3 gi|21229230|ref|NP_635152.1| - 1.9 7.0 5.6 1.9 7.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) DUF2795 PF11387.3 gi|21229231|ref|NP_635153.1| - 1.8e-15 56.5 0.0 2.6e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) MatE PF01554.13 gi|21229232|ref|NP_635154.1| - 1e-56 191.0 33.1 2.4e-29 102.0 9.4 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|21229232|ref|NP_635154.1| - 1.1e-10 41.5 14.3 1.4e-07 31.4 6.2 4.3 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain PfkB PF00294.19 gi|21229233|ref|NP_635155.1| - 1.3e-47 162.4 0.0 1.7e-47 162.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.7 gi|21229233|ref|NP_635155.1| - 0.0079 15.4 0.0 0.024 13.8 0.0 1.7 2 0 0 2 2 2 1 Phosphomethylpyrimidine kinase DUF457 PF04307.9 gi|21229234|ref|NP_635156.1| - 2.4e-15 56.1 9.3 3e-15 55.8 6.4 1.1 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) DUF347 PF03988.7 gi|21229234|ref|NP_635156.1| - 0.0051 16.6 0.5 1.8 8.5 0.0 2.7 2 0 0 2 2 2 2 Repeat of Unknown Function (DUF347) Zn_dep_PLPC PF00882.13 gi|21229234|ref|NP_635156.1| - 0.041 13.5 0.0 0.072 12.7 0.0 1.4 1 1 0 1 1 1 0 Zinc dependent phospholipase C MFS_Mycoplasma PF07672.8 gi|21229234|ref|NP_635156.1| - 0.69 9.0 3.7 4 6.5 0.4 2.2 2 0 0 2 2 2 0 Mycoplasma MFS transporter FixQ PF05545.6 gi|21229234|ref|NP_635156.1| - 0.79 9.4 0.1 0.79 9.4 0.1 2.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ BatA PF07584.6 gi|21229234|ref|NP_635156.1| - 0.8 9.9 0.1 0.8 9.9 0.1 2.7 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal DUF2085 PF09858.4 gi|21229234|ref|NP_635156.1| - 0.83 9.7 3.6 2.5 8.2 0.3 2.6 1 1 0 2 2 2 0 Predicted membrane protein (DUF2085) Peptidase_M48 PF01435.13 gi|21229236|ref|NP_635158.1| - 2.2e-41 141.9 0.0 2.8e-41 141.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|21229236|ref|NP_635158.1| - 2.3e-07 30.1 0.5 2.6e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 MerC PF03203.9 gi|21229236|ref|NP_635158.1| - 1.1 9.6 7.0 0.61 10.4 1.8 2.6 1 1 1 2 2 2 0 MerC mercury resistance protein DUF1129 PF06570.6 gi|21229236|ref|NP_635158.1| - 2.1 7.5 9.6 0.034 13.4 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF3989 PF13150.1 gi|21229236|ref|NP_635158.1| - 4.7 6.7 6.2 3.6 7.1 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) CoA_binding_3 PF13727.1 gi|21229236|ref|NP_635158.1| - 5.7 6.7 8.9 2.2 8.0 0.1 2.4 2 0 0 2 2 2 0 CoA-binding domain ABC_tran PF00005.22 gi|21229237|ref|NP_635159.1| - 2.6e-35 121.7 0.0 6.5e-35 120.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21229237|ref|NP_635159.1| - 2.7e-15 57.1 0.2 1.8e-13 51.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|21229237|ref|NP_635159.1| - 2.1e-07 30.3 4.1 8.3e-05 21.7 0.0 2.6 3 0 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.1 gi|21229237|ref|NP_635159.1| - 2.8e-06 27.7 1.4 5.2e-06 26.9 1.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21229237|ref|NP_635159.1| - 8.2e-06 25.2 0.2 1.5e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.10 gi|21229237|ref|NP_635159.1| - 0.00011 21.0 0.0 0.00015 20.6 0.0 1.1 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein SMC_N PF02463.14 gi|21229237|ref|NP_635159.1| - 0.0032 16.7 0.1 0.019 14.1 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.1 gi|21229237|ref|NP_635159.1| - 0.0046 16.5 0.1 0.28 10.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|21229237|ref|NP_635159.1| - 0.0048 16.1 0.5 0.013 14.6 0.0 1.9 3 0 0 3 3 3 1 Protein of unknown function, DUF258 AAA PF00004.24 gi|21229237|ref|NP_635159.1| - 0.034 14.3 0.4 0.29 11.3 0.3 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|21229237|ref|NP_635159.1| - 0.047 13.8 0.3 0.14 12.2 0.2 2.0 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.15 gi|21229237|ref|NP_635159.1| - 0.069 11.8 0.0 0.11 11.1 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_14 PF13173.1 gi|21229237|ref|NP_635159.1| - 0.078 12.8 0.1 7.4 6.4 0.0 2.6 1 1 1 2 2 2 0 AAA domain MobB PF03205.9 gi|21229237|ref|NP_635159.1| - 0.086 12.5 0.1 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|21229237|ref|NP_635159.1| - 0.11 11.8 0.1 0.23 10.8 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain SbcCD_C PF13558.1 gi|21229237|ref|NP_635159.1| - 0.12 12.2 0.0 0.5 10.3 0.0 2.2 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|21229237|ref|NP_635159.1| - 0.12 11.9 0.6 1.3 8.6 0.4 2.3 1 1 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_33 PF13671.1 gi|21229237|ref|NP_635159.1| - 0.13 12.0 0.1 0.29 11.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.1 gi|21229237|ref|NP_635159.1| - 0.14 12.1 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_10 PF12846.2 gi|21229237|ref|NP_635159.1| - 0.17 11.2 1.1 0.21 10.9 0.1 1.6 2 1 0 2 2 2 0 AAA-like domain ABC2_membrane PF01061.19 gi|21229238|ref|NP_635160.1| - 1.2e-46 158.4 22.0 1.2e-46 158.4 15.2 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21229238|ref|NP_635160.1| - 4.8e-21 75.1 31.8 4.8e-21 75.1 22.1 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|21229238|ref|NP_635160.1| - 4.1e-09 35.7 22.3 6.7e-09 34.9 15.4 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21229238|ref|NP_635160.1| - 9.7e-09 34.7 31.3 2.4e-08 33.4 21.8 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein CcmB PF03379.8 gi|21229238|ref|NP_635160.1| - 7.1e-07 28.6 11.3 7.1e-07 28.6 7.9 1.7 2 0 0 2 2 2 1 CcmB protein LysE PF01810.13 gi|21229239|ref|NP_635161.1| - 7.5e-20 71.0 9.6 9.3e-20 70.7 6.7 1.1 1 0 0 1 1 1 1 LysE type translocator CobA_CobO_BtuR PF02572.10 gi|21229240|ref|NP_635162.1| - 1.9e-53 180.5 0.0 2.1e-53 180.4 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IstB_IS21 PF01695.12 gi|21229240|ref|NP_635162.1| - 0.00022 20.7 0.1 0.21 11.0 0.0 2.1 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.1 gi|21229240|ref|NP_635162.1| - 0.12 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain MscL PF01741.13 gi|21229241|ref|NP_635163.1| - 6.2e-12 45.7 1.9 6.7e-12 45.6 1.3 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL SNARE_assoc PF09335.6 gi|21229241|ref|NP_635163.1| - 0.024 14.8 0.1 0.029 14.5 0.1 1.2 1 1 0 1 1 1 0 SNARE associated Golgi protein Flavodoxin_5 PF12724.2 gi|21229242|ref|NP_635164.1| - 8e-31 106.9 0.0 9.8e-31 106.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|21229242|ref|NP_635164.1| - 6e-08 32.7 0.0 8.3e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|21229242|ref|NP_635164.1| - 5e-06 26.0 0.0 5.2e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|21229242|ref|NP_635164.1| - 0.00011 21.6 0.0 0.094 12.0 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin ERF PF04404.7 gi|21229242|ref|NP_635164.1| - 0.14 11.7 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 ERF superfamily ResIII PF04851.10 gi|21229243|ref|NP_635165.1| - 4.6e-32 111.3 1.1 2e-31 109.2 0.1 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|21229243|ref|NP_635165.1| - 1e-20 74.2 0.4 5.9e-19 68.5 0.0 3.0 3 0 0 3 3 3 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|21229243|ref|NP_635165.1| - 6.9e-10 38.9 2.1 2.8e-08 33.7 0.0 3.5 4 1 0 4 4 4 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|21229243|ref|NP_635165.1| - 5.6e-07 29.2 0.0 1.1e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|21229243|ref|NP_635165.1| - 4.5e-05 23.2 0.0 0.00012 21.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF2075 PF09848.4 gi|21229243|ref|NP_635165.1| - 0.0009 18.3 0.0 0.0019 17.2 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|21229243|ref|NP_635165.1| - 0.0032 17.2 0.2 0.016 14.9 0.0 2.2 2 0 0 2 2 2 1 Part of AAA domain FtsK_SpoIIIE PF01580.13 gi|21229243|ref|NP_635165.1| - 0.013 14.9 0.0 0.035 13.5 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ribosomal_L38e PF01781.13 gi|21229243|ref|NP_635165.1| - 0.019 14.7 0.1 0.071 12.8 0.1 2.0 1 0 0 1 1 1 0 Ribosomal L38e protein family AAA_30 PF13604.1 gi|21229243|ref|NP_635165.1| - 0.019 14.5 0.0 0.11 12.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain PhoH PF02562.11 gi|21229243|ref|NP_635165.1| - 0.028 13.6 0.2 0.26 10.4 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein TrwB_AAD_bind PF10412.4 gi|21229243|ref|NP_635165.1| - 0.084 11.4 0.8 1.9 7.0 0.1 2.4 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Methylase_S PF01420.14 gi|21229244|ref|NP_635166.1| - 1.8e-45 154.9 5.6 1.1e-23 84.0 0.2 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain TPR_12 PF13424.1 gi|21229245|ref|NP_635167.1| - 4.1e-21 74.6 16.5 7.1e-09 35.4 0.0 5.6 5 2 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21229245|ref|NP_635167.1| - 3.5e-08 32.9 19.3 0.0061 16.1 0.2 6.4 3 1 4 7 7 7 4 TPR repeat TPR_14 PF13428.1 gi|21229245|ref|NP_635167.1| - 2.9e-07 30.5 2.6 4.9 8.0 0.0 6.7 6 2 1 7 7 7 1 Tetratricopeptide repeat TPR_2 PF07719.12 gi|21229245|ref|NP_635167.1| - 4.5e-07 29.2 21.4 0.57 10.2 1.3 7.6 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21229245|ref|NP_635167.1| - 7.1e-07 28.9 5.0 7.6 6.6 0.0 6.7 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21229245|ref|NP_635167.1| - 0.0003 20.3 29.4 0.085 12.6 1.7 8.2 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21229245|ref|NP_635167.1| - 0.0004 19.8 21.7 1.1 8.9 0.0 7.2 8 1 0 8 8 8 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|21229245|ref|NP_635167.1| - 0.0011 19.0 13.7 0.043 13.9 0.0 5.3 4 1 1 5 5 5 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.1 gi|21229245|ref|NP_635167.1| - 0.0011 18.9 8.6 2.5 8.5 0.0 6.2 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21229245|ref|NP_635167.1| - 0.0057 16.9 15.4 4.3 7.7 0.2 6.6 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21229245|ref|NP_635167.1| - 0.045 14.4 6.8 46 4.8 0.1 5.5 4 2 0 5 5 5 0 Tetratricopeptide repeat RPN7 PF10602.4 gi|21229245|ref|NP_635167.1| - 0.11 11.8 0.2 0.11 11.8 0.2 5.1 4 2 2 6 6 6 0 26S proteasome subunit RPN7 DUF4398 PF14346.1 gi|21229245|ref|NP_635167.1| - 0.63 10.1 10.2 0.58 10.2 0.3 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4398) Helicase_C_2 PF13307.1 gi|21229246|ref|NP_635168.1| - 6.1e-08 32.7 0.0 7.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain TPR_12 PF13424.1 gi|21229248|ref|NP_635170.1| - 7.1e-49 163.6 31.9 2.1e-08 33.9 0.4 10.7 8 4 2 10 10 10 8 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21229248|ref|NP_635170.1| - 1.3e-26 92.0 45.6 1.5e-05 24.5 1.1 11.9 8 5 4 12 12 12 8 TPR repeat TPR_2 PF07719.12 gi|21229248|ref|NP_635170.1| - 1.6e-26 90.0 55.6 0.00059 19.5 0.2 15.1 16 0 0 16 16 15 8 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21229248|ref|NP_635170.1| - 1.4e-23 81.4 52.8 4e-05 23.0 0.2 14.7 15 2 2 17 17 17 7 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21229248|ref|NP_635170.1| - 6.3e-23 78.7 60.7 8.2e-05 22.1 0.1 14.7 15 0 0 15 15 14 8 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21229248|ref|NP_635170.1| - 8.4e-23 78.7 5.3 0.3 11.8 0.0 14.7 12 6 4 16 16 15 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|21229248|ref|NP_635170.1| - 1.6e-22 77.4 24.0 0.0013 18.3 0.0 13.1 14 0 0 14 14 13 4 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21229248|ref|NP_635170.1| - 5.4e-22 77.0 10.1 0.0012 18.6 0.0 12.2 13 0 0 13 13 12 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21229248|ref|NP_635170.1| - 1.4e-17 63.7 19.7 0.28 11.5 0.0 13.1 9 4 4 13 13 13 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21229248|ref|NP_635170.1| - 4.2e-13 49.5 22.0 0.74 10.5 0.0 12.2 9 4 4 13 13 12 4 Tetratricopeptide repeat TPR_6 PF13174.1 gi|21229248|ref|NP_635170.1| - 1.2e-11 44.2 34.5 0.021 15.2 0.3 13.2 13 3 1 14 14 14 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21229248|ref|NP_635170.1| - 1.1e-07 31.5 28.5 0.95 9.8 0.0 13.9 13 3 2 15 15 15 2 Tetratricopeptide repeat TOM20_plant PF06552.7 gi|21229248|ref|NP_635170.1| - 4.6e-05 23.0 11.8 0.76 9.3 0.3 6.1 5 1 2 7 7 7 2 Plant specific mitochondrial import receptor subunit TOM20 Sel1 PF08238.7 gi|21229248|ref|NP_635170.1| - 0.00026 21.5 13.5 7.3 7.3 0.1 6.4 6 0 0 6 6 5 0 Sel1 repeat DUF4473 PF14747.1 gi|21229248|ref|NP_635170.1| - 0.0032 17.6 0.4 3.4 7.9 0.0 4.8 4 0 0 4 4 4 1 Domain of unknown function (DUF4473) TPR_5 PF12688.2 gi|21229248|ref|NP_635170.1| - 0.0046 16.9 0.1 11 6.0 0.0 3.9 3 0 0 3 3 3 0 Tetratrico peptide repeat TPR_21 PF09976.4 gi|21229248|ref|NP_635170.1| - 0.019 14.8 7.0 0.95 9.3 0.1 4.1 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21229248|ref|NP_635170.1| - 0.031 14.1 2.9 38 4.2 0.0 6.0 6 1 1 7 7 7 0 Tetratricopeptide repeat DUF2225 PF09986.4 gi|21229248|ref|NP_635170.1| - 0.057 12.8 28.2 1.2 8.5 0.2 6.5 4 2 3 7 7 7 0 Uncharacterized protein conserved in bacteria (DUF2225) DUF3366 PF11846.3 gi|21229248|ref|NP_635170.1| - 0.12 12.2 0.0 9.9 5.9 0.0 3.3 3 1 1 4 4 4 0 Domain of unknown function (DUF3366) Apc3 PF12895.2 gi|21229248|ref|NP_635170.1| - 0.13 12.4 28.4 0.81 9.8 1.2 8.9 6 5 3 10 10 9 0 Anaphase-promoting complex, cyclosome, subunit 3 RPN7 PF10602.4 gi|21229248|ref|NP_635170.1| - 0.14 11.5 0.1 0.14 11.5 0.1 4.9 4 1 1 5 5 5 0 26S proteasome subunit RPN7 YfdX PF10938.3 gi|21229248|ref|NP_635170.1| - 0.2 11.3 1.7 15 5.2 0.2 3.6 4 0 0 4 4 4 0 YfdX protein MIT PF04212.13 gi|21229248|ref|NP_635170.1| - 0.24 11.2 30.5 0.64 9.9 0.5 8.6 9 2 1 10 10 9 0 MIT (microtubule interacting and transport) domain N6_Mtase PF02384.11 gi|21229249|ref|NP_635171.1| - 5.2e-65 219.5 0.0 8.8e-65 218.8 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.3 gi|21229249|ref|NP_635171.1| - 2.5e-17 63.5 0.6 9.4e-17 61.7 0.0 2.2 2 1 0 2 2 2 1 HsdM N-terminal domain Methyltransf_26 PF13659.1 gi|21229249|ref|NP_635171.1| - 3.2e-13 49.7 0.0 6e-13 48.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|21229249|ref|NP_635171.1| - 2.3e-09 37.1 0.0 4.3e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.1 gi|21229249|ref|NP_635171.1| - 0.00029 20.4 0.0 0.052 13.1 0.0 2.6 2 0 0 2 2 2 1 Methyltransferase domain Eco57I PF07669.6 gi|21229249|ref|NP_635171.1| - 0.00053 20.2 0.0 0.0012 19.1 0.0 1.6 1 0 0 1 1 1 1 Eco57I restriction-modification methylase MTS PF05175.9 gi|21229249|ref|NP_635171.1| - 0.011 15.0 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Exo_endo_phos PF03372.18 gi|21229250|ref|NP_635172.1| - 2e-26 93.4 0.0 2.4e-26 93.2 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.1 gi|21229250|ref|NP_635172.1| - 2.8e-12 46.3 0.0 6.4e-12 45.1 0.0 1.6 2 0 0 2 2 2 1 Endonuclease-reverse transcriptase Cupin_2 PF07883.6 gi|21229251|ref|NP_635173.1| - 3.4e-12 45.6 0.0 5.5e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.17 gi|21229251|ref|NP_635173.1| - 3.6e-10 39.4 0.0 8.4e-10 38.2 0.0 1.5 1 1 0 1 1 1 1 Cupin MannoseP_isomer PF01050.13 gi|21229251|ref|NP_635173.1| - 3.9e-05 23.2 0.0 5.7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.14 gi|21229251|ref|NP_635173.1| - 0.00034 20.2 0.0 0.00044 19.9 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain EutQ PF06249.7 gi|21229251|ref|NP_635173.1| - 0.0015 18.0 0.0 0.0019 17.7 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.7 gi|21229251|ref|NP_635173.1| - 0.014 14.8 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) GPI PF06560.6 gi|21229251|ref|NP_635173.1| - 0.051 12.5 0.1 0.1 11.6 0.0 1.5 1 1 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Met_10 PF02475.11 gi|21229252|ref|NP_635174.1| - 5.1e-66 222.0 0.0 9.4e-66 221.2 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.2 gi|21229252|ref|NP_635174.1| - 7.4e-09 36.1 0.0 1.4e-08 35.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|21229252|ref|NP_635174.1| - 2.1e-06 27.2 0.0 4.7e-06 26.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.5 gi|21229252|ref|NP_635174.1| - 3.3e-06 26.7 0.0 6.6e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_26 PF13659.1 gi|21229252|ref|NP_635174.1| - 7.7e-06 25.9 0.0 1.3e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21229252|ref|NP_635174.1| - 0.00018 21.1 0.0 0.0004 19.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.11 gi|21229252|ref|NP_635174.1| - 0.0015 17.5 0.0 0.0018 17.2 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase GidB PF02527.10 gi|21229252|ref|NP_635174.1| - 0.0015 17.6 0.0 0.003 16.7 0.0 1.5 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.8 gi|21229252|ref|NP_635174.1| - 0.0057 15.8 0.0 0.0093 15.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.10 gi|21229252|ref|NP_635174.1| - 0.044 13.1 0.0 0.092 12.1 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical protein 95 tRNA_U5-meth_tr PF05958.6 gi|21229252|ref|NP_635174.1| - 0.097 11.3 0.0 0.15 10.6 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase DUF485 PF04341.7 gi|21229253|ref|NP_635175.1| - 0.043 13.5 0.7 0.077 12.7 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 CCDC-167 PF15188.1 gi|21229253|ref|NP_635175.1| - 0.052 13.4 0.4 0.087 12.7 0.3 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 ATP_synth_reg PF14960.1 gi|21229253|ref|NP_635175.1| - 0.1 11.8 0.0 0.18 11.0 0.0 1.4 1 0 0 1 1 1 0 ATP synthase regulation DUF485 PF04341.7 gi|21229254|ref|NP_635176.1| - 0.054 13.2 0.8 0.08 12.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF485 CCDC-167 PF15188.1 gi|21229254|ref|NP_635176.1| - 0.12 12.2 0.2 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 TrkH PF02386.11 gi|21229256|ref|NP_635178.1| - 0.11 11.0 0.2 0.14 10.6 0.1 1.1 1 0 0 1 1 1 0 Cation transport protein FixP_N PF14715.1 gi|21229256|ref|NP_635178.1| - 0.11 11.9 0.1 0.2 11.0 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF1434 PF07254.7 gi|21229256|ref|NP_635178.1| - 0.22 11.3 1.6 0.39 10.5 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1434) TcpE PF12648.2 gi|21229256|ref|NP_635178.1| - 1.5 8.9 5.1 2.1 8.5 0.0 2.5 1 1 1 2 2 2 0 TcpE family CMD PF02627.15 gi|21229257|ref|NP_635179.1| - 3.8e-13 49.0 0.0 4.7e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family FtsA PF14450.1 gi|21229257|ref|NP_635179.1| - 0.012 15.4 0.0 0.015 15.1 0.0 1.3 1 1 0 1 1 1 0 Cell division protein FtsA PPR PF01535.15 gi|21229257|ref|NP_635179.1| - 0.1 12.6 0.1 3.8 7.7 0.0 2.5 2 0 0 2 2 2 0 PPR repeat MreB_Mbl PF06723.8 gi|21229257|ref|NP_635179.1| - 0.11 11.1 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein Aldo_ket_red PF00248.16 gi|21229258|ref|NP_635180.1| - 2e-44 151.5 0.0 2.9e-44 151.0 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|21229258|ref|NP_635180.1| - 8.7e-12 45.2 6.7 2.1e-11 44.0 4.6 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229258|ref|NP_635180.1| - 4.2e-10 39.7 7.4 4.2e-10 39.7 5.1 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21229258|ref|NP_635180.1| - 1.9e-09 37.3 5.7 4.5e-09 36.2 4.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229258|ref|NP_635180.1| - 2e-07 30.7 9.6 8.1e-07 28.7 6.7 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229258|ref|NP_635180.1| - 5.4e-07 29.9 6.1 8e-06 26.1 0.2 2.7 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21229258|ref|NP_635180.1| - 0.00014 22.1 9.3 0.0006 20.1 6.5 2.1 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|21229258|ref|NP_635180.1| - 0.00022 20.6 12.7 0.00035 20.0 3.5 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229258|ref|NP_635180.1| - 0.0017 18.1 2.9 0.0017 18.1 2.0 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229258|ref|NP_635180.1| - 0.0069 17.1 6.8 0.13 13.0 1.3 2.8 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|21229258|ref|NP_635180.1| - 0.0072 16.5 3.6 0.0072 16.5 2.5 2.8 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21229258|ref|NP_635180.1| - 0.01 15.7 2.8 0.01 15.7 1.9 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_3 PF12798.2 gi|21229258|ref|NP_635180.1| - 0.011 16.2 4.5 0.011 16.2 3.1 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|21229258|ref|NP_635180.1| - 0.014 15.0 10.0 0.026 14.1 1.5 2.5 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.1 gi|21229258|ref|NP_635180.1| - 0.035 13.9 7.4 0.27 11.0 0.8 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229258|ref|NP_635180.1| - 0.45 11.1 4.4 1.1 9.9 0.6 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21229258|ref|NP_635180.1| - 2.1 8.8 9.1 0.15 12.4 0.5 2.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain Beta-lactamase PF00144.19 gi|21229259|ref|NP_635181.1| - 1.5e-31 109.6 0.0 2.4e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase HATPase_c_3 PF13589.1 gi|21229260|ref|NP_635182.1| - 8e-07 28.7 0.3 2.2e-06 27.3 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|21229260|ref|NP_635182.1| - 1.5e-05 24.6 0.0 3.5e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.17 gi|21229260|ref|NP_635182.1| - 0.00029 20.8 1.2 0.0026 17.7 0.1 2.6 1 1 0 2 2 2 1 HD domain IMS_C PF11799.3 gi|21229260|ref|NP_635182.1| - 0.058 13.3 0.3 1.9 8.4 0.0 2.8 3 0 0 3 3 3 0 impB/mucB/samB family C-terminal domain DDE_Tnp_IS66 PF03050.9 gi|21229262|ref|NP_635184.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21229262|ref|NP_635184.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21229262|ref|NP_635184.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21229262|ref|NP_635184.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21229262|ref|NP_635184.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21229262|ref|NP_635184.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain DnaB_C PF03796.10 gi|21229263|ref|NP_635185.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21229263|ref|NP_635185.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21229263|ref|NP_635185.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21229263|ref|NP_635185.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) 2C_adapt PF08793.5 gi|21229265|ref|NP_635187.1| - 0.056 13.3 0.2 0.21 11.4 0.0 1.9 1 1 1 2 2 2 0 2-cysteine adaptor domain DUF1638 PF07796.6 gi|21229266|ref|NP_635188.1| - 1.1e-43 148.7 0.1 1.5e-43 148.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF4548 PF15081.1 gi|21229266|ref|NP_635188.1| - 0.057 12.9 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) Closter_coat PF01785.12 gi|21229266|ref|NP_635188.1| - 0.068 12.2 0.0 0.12 11.3 0.0 1.4 1 0 0 1 1 1 0 Closterovirus coat protein zf-CSL PF05207.8 gi|21229266|ref|NP_635188.1| - 0.45 10.0 2.8 0.49 9.9 0.9 1.8 2 0 0 2 2 2 0 CSL zinc finger DDE_Tnp_1 PF01609.16 gi|21229269|ref|NP_635191.1| - 4.8e-12 45.8 0.8 2.4e-11 43.5 0.6 2.0 1 1 0 1 1 1 1 Transposase DDE domain Tn7_Tnp_TnsA_N PF08722.6 gi|21229269|ref|NP_635191.1| - 0.075 13.0 1.1 12 5.9 0.0 2.8 2 0 0 2 2 2 0 TnsA endonuclease N terminal PKD PF00801.15 gi|21229270|ref|NP_635192.1| - 1.4e-49 165.6 17.9 1.7e-16 59.7 1.0 3.3 3 0 0 3 3 3 3 PKD domain ETF_QO PF05187.8 gi|21229270|ref|NP_635192.1| - 7.6e-05 22.6 0.1 7.5 6.5 0.0 3.9 3 1 0 3 3 3 3 Electron transfer flavoprotein-ubiquinone oxidoreductase MIB_HERC2 PF06701.8 gi|21229270|ref|NP_635192.1| - 0.0011 18.8 1.4 7.1 6.6 0.0 3.5 3 0 0 3 3 3 2 Mib_herc2 V-set_CD47 PF08204.6 gi|21229270|ref|NP_635192.1| - 0.0014 18.3 0.0 9.5 5.9 0.0 3.5 3 0 0 3 3 3 2 CD47 immunoglobulin-like domain ANT PF03374.9 gi|21229270|ref|NP_635192.1| - 0.0034 17.4 5.0 2.2 8.3 0.1 3.4 3 0 0 3 3 3 2 Phage antirepressor protein KilAC domain ATP-synt_8 PF00895.15 gi|21229270|ref|NP_635192.1| - 0.36 11.0 9.6 18 5.6 0.1 3.7 3 0 0 3 3 3 0 ATP synthase protein 8 PKD PF00801.15 gi|21229271|ref|NP_635193.1| - 2.5e-17 62.3 3.2 4.6e-17 61.5 1.0 2.0 2 0 0 2 2 2 1 PKD domain Alginate_lyase2 PF08787.6 gi|21229271|ref|NP_635193.1| - 0.0055 16.3 0.0 0.057 13.0 0.0 1.9 1 1 1 2 2 2 1 Alginate lyase V-set_CD47 PF08204.6 gi|21229271|ref|NP_635193.1| - 0.013 15.2 0.0 1.8 8.3 0.0 2.2 2 0 0 2 2 2 0 CD47 immunoglobulin-like domain GyrI-like PF06445.10 gi|21229272|ref|NP_635194.1| - 3.7e-23 82.2 0.2 5e-23 81.8 0.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MerR_1 PF13411.1 gi|21229272|ref|NP_635194.1| - 4e-10 39.3 0.0 6.9e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein Cass2 PF14526.1 gi|21229272|ref|NP_635194.1| - 1.9e-07 31.1 0.0 3.9e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 Integron-associated effector binding protein MerR PF00376.18 gi|21229272|ref|NP_635194.1| - 9e-07 28.3 0.0 1.7e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.6 gi|21229272|ref|NP_635194.1| - 0.011 16.0 0.1 0.022 15.1 0.1 1.5 1 0 0 1 1 1 0 MerR, DNA binding PKD PF00801.15 gi|21229273|ref|NP_635195.1| - 1e-14 54.0 3.4 3.1e-14 52.4 0.4 3.2 2 0 0 2 2 2 1 PKD domain Acyl-CoA_dh_M PF02770.14 gi|21229273|ref|NP_635195.1| - 0.22 11.0 8.0 0.75 9.3 0.3 3.7 3 1 1 4 4 4 0 Acyl-CoA dehydrogenase, middle domain NAS PF03059.11 gi|21229274|ref|NP_635196.1| - 1.4e-43 149.0 0.0 1.8e-43 148.6 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein DUF2258 PF10015.4 gi|21229274|ref|NP_635196.1| - 0.1 12.3 0.1 2.8 7.7 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) HTH_5 PF01022.15 gi|21229275|ref|NP_635197.1| - 9.2e-14 50.8 0.2 1.6e-13 50.0 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21229275|ref|NP_635197.1| - 4.1e-13 48.9 0.4 6.5e-13 48.2 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|21229275|ref|NP_635197.1| - 1.7e-07 30.7 0.2 2.6e-07 30.2 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|21229275|ref|NP_635197.1| - 5e-07 29.2 0.2 6.5e-07 28.9 0.2 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21229275|ref|NP_635197.1| - 4.8e-06 25.8 0.1 2.1e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|21229275|ref|NP_635197.1| - 5.1e-06 26.1 0.6 3.9e-05 23.3 0.4 2.0 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.17 gi|21229275|ref|NP_635197.1| - 8.3e-06 25.4 0.0 1.4e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.7 gi|21229275|ref|NP_635197.1| - 1.7e-05 24.3 0.2 3.4e-05 23.4 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_26 PF13443.1 gi|21229275|ref|NP_635197.1| - 0.00079 19.5 0.0 0.28 11.4 0.0 2.2 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_34 PF13601.1 gi|21229275|ref|NP_635197.1| - 0.00088 19.2 0.2 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|21229275|ref|NP_635197.1| - 0.0022 18.0 0.1 0.0034 17.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_36 PF13730.1 gi|21229275|ref|NP_635197.1| - 0.0079 16.3 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|21229275|ref|NP_635197.1| - 0.0087 16.2 0.0 0.023 14.8 0.0 1.7 1 1 1 2 2 2 1 Winged helix-turn helix DUF2250 PF10007.4 gi|21229275|ref|NP_635197.1| - 0.021 14.7 0.4 0.031 14.1 0.2 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) LexA_DNA_bind PF01726.11 gi|21229275|ref|NP_635197.1| - 0.036 13.6 0.0 0.066 12.7 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HxlR PF01638.12 gi|21229275|ref|NP_635197.1| - 0.036 13.6 0.2 0.048 13.3 0.1 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_41 PF14502.1 gi|21229275|ref|NP_635197.1| - 0.067 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|21229275|ref|NP_635197.1| - 0.078 12.9 0.1 0.19 11.7 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.16 gi|21229275|ref|NP_635197.1| - 0.083 12.3 0.0 0.18 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.1 gi|21229275|ref|NP_635197.1| - 0.095 12.4 0.0 0.17 11.6 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HN PF00423.14 gi|21229276|ref|NP_635198.1| - 0.0045 15.3 0.0 0.0046 15.3 0.0 1.0 1 0 0 1 1 1 1 Haemagglutinin-neuraminidase EVC2_like PF12297.3 gi|21229276|ref|NP_635198.1| - 0.0097 14.5 0.0 0.011 14.4 0.0 1.0 1 0 0 1 1 1 1 Ellis van Creveld protein 2 like protein IncA PF04156.9 gi|21229276|ref|NP_635198.1| - 0.017 14.7 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 IncA protein DUF4577 PF15145.1 gi|21229276|ref|NP_635198.1| - 0.024 14.5 0.2 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Syntaxin PF00804.20 gi|21229276|ref|NP_635198.1| - 0.04 14.0 0.2 0.042 14.0 0.1 1.1 1 0 0 1 1 1 0 Syntaxin DUF948 PF06103.6 gi|21229276|ref|NP_635198.1| - 0.048 13.5 0.2 0.062 13.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Anoctamin PF04547.7 gi|21229276|ref|NP_635198.1| - 0.12 11.0 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel FlaC_arch PF05377.6 gi|21229276|ref|NP_635198.1| - 0.14 12.0 1.1 0.18 11.7 0.7 1.2 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) Cation_ATPase_N PF00690.21 gi|21229276|ref|NP_635198.1| - 0.19 11.1 0.5 0.34 10.3 0.3 1.4 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus MtrF PF09472.5 gi|21229276|ref|NP_635198.1| - 9.5 5.5 6.7 3.7 6.8 0.1 2.2 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) PepSY PF03413.14 gi|21229277|ref|NP_635199.1| - 0.011 16.3 2.2 0.026 15.1 1.5 1.7 1 1 0 1 1 1 0 Peptidase propeptide and YPEB domain BatA PF07584.6 gi|21229278|ref|NP_635200.1| - 0.023 14.8 0.0 0.14 12.3 0.0 2.2 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal Phosphodiest PF01663.17 gi|21229279|ref|NP_635201.1| - 9.1e-16 58.1 0.0 1.8e-14 53.8 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.18 gi|21229279|ref|NP_635201.1| - 6.3e-11 42.0 0.0 3.7e-10 39.4 0.0 2.2 2 1 0 2 2 2 1 Sulfatase Metalloenzyme PF01676.13 gi|21229279|ref|NP_635201.1| - 3.5e-10 39.6 0.2 3.5e-09 36.4 0.1 2.1 1 1 0 1 1 1 1 Metalloenzyme superfamily PglZ PF08665.7 gi|21229279|ref|NP_635201.1| - 0.0024 17.5 0.0 0.017 14.7 0.0 2.0 1 1 0 1 1 1 1 PglZ domain DUF1704 PF08014.6 gi|21229279|ref|NP_635201.1| - 0.045 12.7 0.0 0.059 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1704) DUF4434 PF14488.1 gi|21229279|ref|NP_635201.1| - 0.098 12.3 0.2 5.6 6.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) NosD PF05048.8 gi|21229280|ref|NP_635202.1| - 1.3e-37 129.2 23.1 1.3e-37 129.2 16.0 2.0 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.15 gi|21229280|ref|NP_635202.1| - 2.9e-20 71.7 0.0 1.1e-09 37.9 0.0 2.4 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.1 gi|21229280|ref|NP_635202.1| - 5.1e-08 32.8 19.9 5.1e-08 32.8 13.8 2.0 2 0 0 2 2 2 1 Right handed beta helix region Cupin_2 PF07883.6 gi|21229281|ref|NP_635203.1| - 4.4e-15 54.9 0.1 1.9e-14 52.9 0.0 2.0 1 1 1 2 2 2 1 Cupin domain HTH_19 PF12844.2 gi|21229281|ref|NP_635203.1| - 1.1e-09 38.1 0.1 1.8e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|21229281|ref|NP_635203.1| - 6.7e-08 32.2 0.1 1.2e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|21229281|ref|NP_635203.1| - 7.8e-06 25.9 0.0 1.2e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.13 gi|21229281|ref|NP_635203.1| - 0.0019 17.8 0.1 0.0037 16.8 0.0 1.6 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase CENP-C_C PF11699.3 gi|21229281|ref|NP_635203.1| - 0.0056 16.6 0.0 0.015 15.2 0.0 1.7 1 1 1 2 2 2 1 Mif2/CENP-C like AraC_binding PF02311.14 gi|21229281|ref|NP_635203.1| - 0.006 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.7 gi|21229281|ref|NP_635203.1| - 0.0085 15.4 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) EutQ PF06249.7 gi|21229281|ref|NP_635203.1| - 0.041 13.4 0.0 0.083 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ AMP-binding PF00501.23 gi|21229282|ref|NP_635204.1| - 1.5e-80 270.6 0.0 1.8e-80 270.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|21229282|ref|NP_635204.1| - 2.1e-19 70.2 0.7 5e-19 69.0 0.2 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Fer4_7 PF12838.2 gi|21229283|ref|NP_635205.1| - 1.5e-10 41.2 7.6 2e-10 40.8 5.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21229283|ref|NP_635205.1| - 1.7e-07 30.9 5.2 2.5e-07 30.4 3.6 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229283|ref|NP_635205.1| - 1.9e-07 30.7 17.3 1.5e-06 27.9 5.6 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21229283|ref|NP_635205.1| - 3.4e-06 27.3 6.4 0.011 16.1 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229283|ref|NP_635205.1| - 3.9e-06 27.0 8.3 8.8e-06 25.8 5.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21229283|ref|NP_635205.1| - 4.1e-06 26.6 7.3 0.017 15.3 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21229283|ref|NP_635205.1| - 6e-06 25.8 11.5 0.0027 17.5 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|21229283|ref|NP_635205.1| - 1.2e-05 24.6 13.0 0.00014 21.3 1.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229283|ref|NP_635205.1| - 2.6e-05 23.8 10.0 0.004 16.9 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21229283|ref|NP_635205.1| - 4.5e-05 23.3 8.4 8.8e-05 22.4 5.9 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229283|ref|NP_635205.1| - 0.00029 21.2 4.3 0.26 11.7 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21229283|ref|NP_635205.1| - 0.001 19.3 6.5 0.14 12.5 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|21229283|ref|NP_635205.1| - 0.0013 19.3 10.3 0.032 14.9 7.4 2.1 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.2 gi|21229283|ref|NP_635205.1| - 0.0064 16.9 16.6 0.071 13.6 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21229283|ref|NP_635205.1| - 0.0076 16.8 8.7 0.32 11.6 0.5 2.1 1 1 1 2 2 2 2 4Fe-4S single cluster domain P12 PF12669.2 gi|21229283|ref|NP_635205.1| - 0.025 14.7 3.9 0.063 13.4 0.2 2.1 2 0 0 2 2 2 0 Virus attachment protein p12 family DUF678 PF05077.7 gi|21229283|ref|NP_635205.1| - 0.16 11.9 1.6 2.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) POR_N PF01855.14 gi|21229284|ref|NP_635206.1| - 7.9e-60 202.2 0.0 9.8e-60 201.9 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|21229284|ref|NP_635206.1| - 1.1e-05 25.0 0.1 1.7e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.15 gi|21229284|ref|NP_635206.1| - 0.00029 20.7 0.0 0.0005 19.9 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fumerase PF05681.9 gi|21229284|ref|NP_635206.1| - 0.075 12.1 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Fumarate hydratase (Fumerase) POR PF01558.13 gi|21229285|ref|NP_635207.1| - 3.2e-38 131.3 0.2 5.8e-38 130.5 0.1 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|21229285|ref|NP_635207.1| - 4.2e-24 84.8 0.1 6.8e-24 84.1 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Orn_Arg_deC_N PF02784.11 gi|21229287|ref|NP_635209.1| - 1.9e-50 171.3 0.0 2.5e-50 171.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|21229287|ref|NP_635209.1| - 2.6e-18 65.8 0.0 4e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA_permease_2 PF13520.1 gi|21229288|ref|NP_635210.1| - 5.5e-42 143.8 47.1 8.5e-42 143.1 32.7 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|21229288|ref|NP_635210.1| - 6.4e-32 110.5 47.2 1e-31 109.8 32.7 1.3 1 1 0 1 1 1 1 Amino acid permease Lactamase_B PF00753.22 gi|21229289|ref|NP_635211.1| - 2.9e-23 82.5 0.0 4.5e-23 81.9 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|21229289|ref|NP_635211.1| - 9.7e-06 25.6 0.0 2.6e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Flavodoxin Lactamase_B_3 PF13483.1 gi|21229289|ref|NP_635211.1| - 0.00079 19.1 0.0 0.0018 18.0 0.0 1.5 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Flavodoxin_5 PF12724.2 gi|21229289|ref|NP_635211.1| - 0.0073 16.3 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Hydrolase_4 PF12146.3 gi|21229289|ref|NP_635211.1| - 0.011 15.5 0.0 0.051 13.4 0.0 2.1 2 0 0 2 2 2 0 Putative lysophospholipase UPF0261 PF06792.6 gi|21229289|ref|NP_635211.1| - 0.089 11.2 0.0 0.15 10.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Gln-synt_C PF00120.19 gi|21229290|ref|NP_635212.1| - 6.5e-44 150.0 0.0 2.3e-43 148.2 0.0 1.8 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|21229290|ref|NP_635212.1| - 7.2e-11 41.5 0.0 1.5e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Glycolipid_bind PF06475.6 gi|21229290|ref|NP_635212.1| - 7.2e-05 22.0 0.0 0.00013 21.1 0.0 1.3 1 0 0 1 1 1 1 Putative glycolipid-binding Ion_trans PF00520.26 gi|21229291|ref|NP_635213.1| - 4e-22 78.4 11.1 4e-22 78.4 7.7 1.6 2 0 0 2 2 2 1 Ion transport protein Ion_trans_2 PF07885.11 gi|21229291|ref|NP_635213.1| - 1.7e-14 53.2 7.7 1.7e-14 53.2 5.3 2.3 2 0 0 2 2 2 1 Ion channel zf-ribbon_3 PF13248.1 gi|21229291|ref|NP_635213.1| - 4.9e-06 25.5 2.5 7.3e-06 25.0 1.7 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|21229291|ref|NP_635213.1| - 0.0028 17.4 1.8 0.0048 16.6 1.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|21229291|ref|NP_635213.1| - 0.14 11.6 4.4 0.57 9.7 3.1 1.8 1 1 1 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|21229291|ref|NP_635213.1| - 0.53 10.0 0.1 0.53 10.0 0.1 2.6 3 0 0 3 3 3 0 Nudix N-terminal DUF4231 PF14015.1 gi|21229291|ref|NP_635213.1| - 0.92 9.5 2.9 11 6.0 0.8 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) zf-CCHC_3 PF13917.1 gi|21229291|ref|NP_635213.1| - 1.1 9.0 6.8 0.64 9.8 0.4 2.2 1 1 1 2 2 2 0 Zinc knuckle tRNA_deacylase PF04414.7 gi|21229292|ref|NP_635214.1| - 5e-70 234.9 0.0 6.1e-70 234.6 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DUF3147 PF11345.3 gi|21229293|ref|NP_635215.1| - 9.8e-36 122.0 6.1 1.1e-35 121.9 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) DUF3147 PF11345.3 gi|21229294|ref|NP_635216.1| - 9.8e-41 138.1 11.5 1.1e-40 137.9 8.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) Bax1-I PF01027.15 gi|21229294|ref|NP_635216.1| - 0.44 10.1 8.2 0.66 9.5 5.7 1.2 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF4131 PF13567.1 gi|21229294|ref|NP_635216.1| - 1.8 7.9 7.6 3 7.2 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) PAP2 PF01569.16 gi|21229294|ref|NP_635216.1| - 6 6.5 8.3 1.6 8.4 3.3 1.7 1 1 1 2 2 2 0 PAP2 superfamily Zn_Tnp_IS91 PF14319.1 gi|21229295|ref|NP_635217.1| - 0.098 12.1 6.0 0.11 11.9 4.2 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain Desulfoferrod_N PF06397.7 gi|21229295|ref|NP_635217.1| - 0.44 9.9 20.0 0.19 11.1 2.6 2.6 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain MatE PF01554.13 gi|21229296|ref|NP_635218.1| - 6.5e-58 194.9 38.3 1e-32 113.0 9.2 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|21229296|ref|NP_635218.1| - 7.5e-11 42.0 22.0 3.4e-09 36.6 9.5 4.6 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.17 gi|21229297|ref|NP_635219.1| - 4.8e-16 58.2 0.0 5.4e-15 54.8 0.0 2.1 1 1 1 2 2 2 1 MarR family MarR_2 PF12802.2 gi|21229297|ref|NP_635219.1| - 1e-13 50.6 0.0 1.6e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|21229297|ref|NP_635219.1| - 2e-08 33.4 0.0 5.8e-08 32.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|21229297|ref|NP_635219.1| - 2.2e-08 34.3 0.0 3.8e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.14 gi|21229297|ref|NP_635219.1| - 2.7e-06 26.9 0.4 8.3e-06 25.4 0.3 1.8 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|21229297|ref|NP_635219.1| - 4.1e-06 26.2 0.8 5.5e-06 25.8 0.6 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit Fe_dep_repress PF01325.14 gi|21229297|ref|NP_635219.1| - 5e-06 26.3 0.1 1.2e-05 25.1 0.0 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.1 gi|21229297|ref|NP_635219.1| - 1.1e-05 25.4 0.2 1.5e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.7 gi|21229297|ref|NP_635219.1| - 4.6e-05 22.9 0.0 7.5e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain B-block_TFIIIC PF04182.7 gi|21229297|ref|NP_635219.1| - 9e-05 22.2 0.1 0.00019 21.2 0.0 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_Crp_2 PF13545.1 gi|21229297|ref|NP_635219.1| - 0.00019 21.1 0.0 0.00083 19.0 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain RPA_C PF08784.6 gi|21229297|ref|NP_635219.1| - 0.0003 21.1 0.0 0.00059 20.2 0.0 1.5 1 0 0 1 1 1 1 Replication protein A C terminal HTH_36 PF13730.1 gi|21229297|ref|NP_635219.1| - 0.0007 19.6 0.4 0.002 18.2 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HxlR PF01638.12 gi|21229297|ref|NP_635219.1| - 0.00092 18.7 0.0 0.002 17.7 0.0 1.5 2 0 0 2 2 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.5 gi|21229297|ref|NP_635219.1| - 0.0016 17.9 0.0 0.0026 17.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain ANT PF03374.9 gi|21229297|ref|NP_635219.1| - 0.0029 17.6 0.1 0.005 16.8 0.1 1.4 1 0 0 1 1 1 1 Phage antirepressor protein KilAC domain GntR PF00392.16 gi|21229297|ref|NP_635219.1| - 0.0039 16.6 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_29 PF13551.1 gi|21229297|ref|NP_635219.1| - 0.0053 16.9 0.0 0.0076 16.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix FUR PF01475.14 gi|21229297|ref|NP_635219.1| - 0.027 14.4 0.2 0.043 13.7 0.2 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family PadR PF03551.9 gi|21229297|ref|NP_635219.1| - 0.038 13.7 1.1 0.053 13.2 0.2 1.6 2 0 0 2 2 1 0 Transcriptional regulator PadR-like family DUF4065 PF13274.1 gi|21229297|ref|NP_635219.1| - 0.04 14.6 0.4 0.068 13.8 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) DUF3116 PF11313.3 gi|21229297|ref|NP_635219.1| - 0.043 13.4 0.2 0.071 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) HTH_23 PF13384.1 gi|21229297|ref|NP_635219.1| - 0.043 13.4 0.0 0.096 12.3 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_20 PF12840.2 gi|21229297|ref|NP_635219.1| - 0.052 13.3 0.0 0.12 12.2 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain Mga PF05043.8 gi|21229297|ref|NP_635219.1| - 0.06 13.6 0.1 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 Mga helix-turn-helix domain STN1_2 PF09170.5 gi|21229297|ref|NP_635219.1| - 0.072 12.8 0.2 0.089 12.5 0.1 1.3 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 HTH_DeoR PF08220.7 gi|21229297|ref|NP_635219.1| - 0.074 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.15 gi|21229297|ref|NP_635219.1| - 0.092 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_28 PF13518.1 gi|21229297|ref|NP_635219.1| - 0.12 12.4 0.1 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_4 PF13613.1 gi|21229297|ref|NP_635219.1| - 0.13 11.7 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease DUF2157 PF09925.4 gi|21229298|ref|NP_635220.1| - 4e-05 23.2 0.6 6.5e-05 22.5 0.1 1.6 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) DUF4401 PF14351.1 gi|21229299|ref|NP_635221.1| - 0.04 12.9 10.4 0.05 12.5 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) Abhydrolase_6 PF12697.2 gi|21229300|ref|NP_635222.1| - 1.3e-21 77.4 0.0 1.6e-21 77.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|21229300|ref|NP_635222.1| - 4.1e-17 62.2 0.0 1.5e-16 60.4 0.0 1.8 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.16 gi|21229300|ref|NP_635222.1| - 1.7e-15 56.8 0.0 5e-09 35.6 0.0 2.2 1 1 1 2 2 2 2 Prolyl oligopeptidase family BAAT_C PF08840.6 gi|21229300|ref|NP_635222.1| - 7e-12 45.5 0.0 8.5e-08 32.1 0.0 2.3 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.13 gi|21229300|ref|NP_635222.1| - 1.3e-11 44.4 0.0 2.1e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.13 gi|21229300|ref|NP_635222.1| - 3.1e-08 33.1 0.0 0.0037 16.5 0.0 2.7 3 0 0 3 3 3 2 Dienelactone hydrolase family Abhydrolase_1 PF00561.15 gi|21229300|ref|NP_635222.1| - 1.7e-06 27.7 0.0 3.3e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.8 gi|21229300|ref|NP_635222.1| - 2.4e-05 23.9 0.0 0.00028 20.5 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.7 gi|21229300|ref|NP_635222.1| - 4.7e-05 22.0 0.0 0.034 12.6 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) DUF1100 PF06500.6 gi|21229300|ref|NP_635222.1| - 0.0016 17.1 0.0 0.0035 15.9 0.0 1.5 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1100) Hydrolase_4 PF12146.3 gi|21229300|ref|NP_635222.1| - 0.0047 16.7 0.1 0.0094 15.7 0.0 1.4 1 0 0 1 1 1 1 Putative lysophospholipase PGAP1 PF07819.8 gi|21229300|ref|NP_635222.1| - 0.0075 15.8 0.0 0.018 14.6 0.0 1.6 1 0 0 1 1 1 1 PGAP1-like protein Acyl_transf_2 PF02273.10 gi|21229300|ref|NP_635222.1| - 0.0098 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Acyl transferase FSH1 PF03959.8 gi|21229300|ref|NP_635222.1| - 0.013 14.9 0.0 0.15 11.4 0.0 2.2 1 1 0 1 1 1 0 Serine hydrolase (FSH1) DUF2974 PF11187.3 gi|21229300|ref|NP_635222.1| - 0.043 13.1 0.0 0.066 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Endonuc_Holl PF10107.4 gi|21229300|ref|NP_635222.1| - 0.097 12.3 0.2 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase EamA PF00892.15 gi|21229301|ref|NP_635223.1| - 3.8e-21 75.4 36.3 2.3e-11 43.8 9.6 2.5 2 1 0 2 2 2 2 EamA-like transporter family EmrE PF13536.1 gi|21229301|ref|NP_635223.1| - 0.0005 20.2 7.1 0.0005 20.2 4.9 3.6 1 1 3 4 4 4 1 Multidrug resistance efflux transporter Trp_oprn_chp PF09534.5 gi|21229301|ref|NP_635223.1| - 0.43 10.1 3.5 0.5 9.9 0.6 2.4 1 1 1 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) IMCp PF12314.3 gi|21229302|ref|NP_635224.1| - 0.018 15.1 10.7 0.025 14.6 7.4 1.2 1 0 0 1 1 1 0 Inner membrane complex protein DUF515 PF04415.7 gi|21229302|ref|NP_635224.1| - 0.68 8.1 8.3 1.4 7.0 5.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF515) DUF2129 PF09902.4 gi|21229302|ref|NP_635224.1| - 2.7 7.8 5.1 45 3.9 3.5 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) GATase PF00117.23 gi|21229303|ref|NP_635225.1| - 3.1e-25 88.7 0.0 6.6e-25 87.6 0.0 1.5 1 1 1 2 2 2 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|21229303|ref|NP_635225.1| - 3.9e-07 29.7 0.2 1.6e-06 27.7 0.1 1.9 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|21229303|ref|NP_635225.1| - 2.6e-06 27.1 0.0 3.8e-06 26.5 0.0 1.4 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain HTS PF04204.11 gi|21229303|ref|NP_635225.1| - 1.3e-05 24.1 0.0 1.7e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.19 gi|21229303|ref|NP_635225.1| - 7.7e-05 22.1 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF2156 PF09924.4 gi|21229304|ref|NP_635226.1| - 2.4e-95 318.7 0.0 3.5e-95 318.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2156) UPF0104 PF03706.8 gi|21229304|ref|NP_635226.1| - 2.8e-15 56.3 28.6 2.8e-15 56.3 19.8 3.1 2 1 1 3 3 3 1 Uncharacterised protein family (UPF0104) Peptidase_C1 PF00112.18 gi|21229305|ref|NP_635227.1| - 3.3e-25 89.2 0.1 5.3e-25 88.5 0.1 1.3 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.15 gi|21229305|ref|NP_635227.1| - 9.4e-21 73.3 5.2 4.7e-12 45.4 0.9 2.8 2 0 0 2 2 2 2 PKD domain Peptidase_C1_2 PF03051.10 gi|21229305|ref|NP_635227.1| - 0.021 13.3 0.3 0.25 9.8 0.1 2.0 2 0 0 2 2 2 0 Peptidase C1-like family MatE PF01554.13 gi|21229306|ref|NP_635228.1| - 4.9e-31 107.5 34.1 1.4e-15 57.3 7.9 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|21229306|ref|NP_635228.1| - 5.4e-10 39.2 24.0 2e-08 34.1 11.2 4.7 2 1 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain Peptidase_M50 PF02163.17 gi|21229306|ref|NP_635228.1| - 0.1 11.5 1.7 0.29 10.0 1.1 2.1 1 1 0 1 1 1 0 Peptidase family M50 Response_reg PF00072.19 gi|21229307|ref|NP_635229.1| - 5.8e-40 135.7 1.0 6.2e-19 68.0 0.1 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.21 gi|21229307|ref|NP_635229.1| - 6.4e-34 116.0 0.0 1.3e-33 114.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|21229307|ref|NP_635229.1| - 2.9e-19 68.8 0.2 1e-18 67.0 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.1 gi|21229307|ref|NP_635229.1| - 1.6e-16 60.5 0.0 4.3e-08 33.4 0.0 2.8 3 0 0 3 3 3 2 PAS domain PAS_8 PF13188.1 gi|21229307|ref|NP_635229.1| - 2.2e-15 55.8 0.0 3.8e-06 26.5 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|21229307|ref|NP_635229.1| - 3.9e-13 49.1 0.0 7.2e-08 32.2 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|21229307|ref|NP_635229.1| - 4.6e-08 33.0 0.0 3.1e-05 23.9 0.0 2.6 2 1 0 2 2 2 2 PAS fold PAS_3 PF08447.6 gi|21229307|ref|NP_635229.1| - 0.00022 21.2 0.0 0.00058 19.9 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.1 gi|21229307|ref|NP_635229.1| - 0.054 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|21229307|ref|NP_635229.1| - 0.089 12.5 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Response_reg PF00072.19 gi|21229308|ref|NP_635230.1| - 8.7e-25 86.9 0.0 9.6e-25 86.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_U32 PF01136.14 gi|21229309|ref|NP_635231.1| - 4.5e-95 317.0 0.0 5.5e-73 244.7 0.0 2.3 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|21229309|ref|NP_635231.1| - 5.6e-31 107.1 2.6 5.6e-31 107.1 1.8 2.2 2 0 0 2 2 2 1 Collagenase Radical_SAM PF04055.16 gi|21229309|ref|NP_635231.1| - 0.044 13.9 1.5 15 5.6 0.0 4.3 5 1 0 5 5 5 0 Radical SAM superfamily ADH_N PF08240.7 gi|21229309|ref|NP_635231.1| - 0.052 13.3 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain HTH_5 PF01022.15 gi|21229310|ref|NP_635232.1| - 3e-12 46.0 0.0 4.3e-12 45.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|21229310|ref|NP_635232.1| - 2e-10 40.3 0.0 2.7e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|21229310|ref|NP_635232.1| - 4.4e-06 25.9 0.1 8.3e-06 25.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RepL PF05732.6 gi|21229310|ref|NP_635232.1| - 0.00024 20.3 2.4 0.00029 20.0 1.7 1.3 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_1 PF00126.22 gi|21229310|ref|NP_635232.1| - 0.00036 20.2 0.0 0.00064 19.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_11 PF08279.7 gi|21229310|ref|NP_635232.1| - 0.0031 17.1 0.1 0.0071 15.9 0.0 1.6 2 0 0 2 2 2 1 HTH domain HTH_IclR PF09339.5 gi|21229310|ref|NP_635232.1| - 0.0062 16.1 0.0 0.013 15.0 0.0 1.6 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.1 gi|21229310|ref|NP_635232.1| - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|21229310|ref|NP_635232.1| - 0.011 15.4 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF762 PF05555.6 gi|21229310|ref|NP_635232.1| - 0.012 14.8 5.1 0.014 14.6 3.6 1.1 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) HTH_10 PF04967.7 gi|21229310|ref|NP_635232.1| - 0.013 15.0 0.0 0.025 14.1 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain TrmB PF01978.14 gi|21229310|ref|NP_635232.1| - 0.045 13.4 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.1 gi|21229310|ref|NP_635232.1| - 0.1 12.1 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.14 gi|21229310|ref|NP_635232.1| - 0.11 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Bro-N PF02498.12 gi|21229310|ref|NP_635232.1| - 0.12 12.6 1.1 0.22 11.8 0.7 1.8 1 1 0 1 1 1 0 BRO family, N-terminal domain Rrf2 PF02082.15 gi|21229310|ref|NP_635232.1| - 0.13 12.3 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.1 gi|21229310|ref|NP_635232.1| - 0.14 12.4 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain Mem_trans PF03547.13 gi|21229311|ref|NP_635233.1| - 5.5e-35 120.3 33.1 2.7e-19 68.7 5.9 2.0 1 1 1 2 2 2 2 Membrane transport protein YbjM PF11045.3 gi|21229311|ref|NP_635233.1| - 0.0054 16.4 4.4 0.047 13.4 0.5 2.9 2 1 0 2 2 2 1 Putative inner membrane protein of Enterobacteriaceae DUF1129 PF06570.6 gi|21229311|ref|NP_635233.1| - 0.0071 15.6 4.3 0.0071 15.6 3.0 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF1129) Cation_efflux PF01545.16 gi|21229312|ref|NP_635234.1| - 0.001 18.2 4.8 0.001 18.2 3.3 1.0 1 0 0 1 1 1 1 Cation efflux family PepSY_TM_3 PF13706.1 gi|21229312|ref|NP_635234.1| - 0.0052 16.1 2.1 0.024 14.0 0.2 2.0 2 0 0 2 2 2 1 PepSY-associated TM helix Cation_efflux PF01545.16 gi|21229313|ref|NP_635235.1| - 6.2e-26 91.1 0.4 7.3e-26 90.8 0.3 1.0 1 0 0 1 1 1 1 Cation efflux family PEPcase_2 PF14010.1 gi|21229314|ref|NP_635236.1| - 2.8e-155 517.3 0.0 3.1e-155 517.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Prismane PF03063.15 gi|21229315|ref|NP_635237.1| - 1.2e-174 581.5 0.0 1.3e-174 581.3 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_7 PF12838.2 gi|21229316|ref|NP_635238.1| - 3.2e-07 30.6 7.6 0.00015 22.0 0.3 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Flavodoxin_3 PF12641.2 gi|21229316|ref|NP_635238.1| - 1.6e-05 24.3 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.2 gi|21229316|ref|NP_635238.1| - 2.3e-05 24.4 0.0 3.9e-05 23.6 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin domain Fer4_16 PF13484.1 gi|21229316|ref|NP_635238.1| - 2.5e-05 24.9 5.5 0.026 15.2 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|21229316|ref|NP_635238.1| - 7.3e-05 22.2 14.0 0.00067 19.1 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21229316|ref|NP_635238.1| - 0.00013 22.1 11.7 0.001 19.2 7.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21229316|ref|NP_635238.1| - 0.00015 21.4 12.2 0.0012 18.6 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21229316|ref|NP_635238.1| - 0.00054 19.9 11.9 0.0081 16.1 7.8 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229316|ref|NP_635238.1| - 0.0027 17.4 12.0 0.035 13.9 8.9 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229316|ref|NP_635238.1| - 0.0048 16.7 14.5 0.0054 16.5 2.8 2.7 1 1 1 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21229316|ref|NP_635238.1| - 0.0048 16.7 11.7 0.071 12.9 8.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229316|ref|NP_635238.1| - 0.031 14.6 11.8 0.063 13.7 1.8 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Cbl_N3 PF02762.9 gi|21229316|ref|NP_635238.1| - 0.096 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain Fer4_3 PF12798.2 gi|21229316|ref|NP_635238.1| - 0.19 12.3 15.2 0.22 12.1 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21229316|ref|NP_635238.1| - 1.7 9.0 16.8 0.15 12.4 1.2 2.7 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21229316|ref|NP_635238.1| - 5.4 7.6 17.1 0.36 11.2 2.6 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain DUF2265 PF10023.4 gi|21229317|ref|NP_635239.1| - 0.2 10.7 9.6 0.22 10.6 6.6 1.0 1 0 0 1 1 1 0 Predicted aminopeptidase (DUF2265) MarR_2 PF12802.2 gi|21229318|ref|NP_635240.1| - 2.1e-05 24.0 0.0 3.6e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|21229318|ref|NP_635240.1| - 5.1e-05 23.5 0.1 0.00012 22.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|21229318|ref|NP_635240.1| - 0.00019 20.7 1.0 0.00047 19.4 0.7 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding CarboxypepD_reg PF13620.1 gi|21229318|ref|NP_635240.1| - 0.0038 17.2 0.1 0.0083 16.1 0.0 1.7 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain MarR PF01047.17 gi|21229318|ref|NP_635240.1| - 0.0051 16.4 0.1 0.012 15.2 0.0 1.6 1 0 0 1 1 1 1 MarR family DUF4480 PF13715.1 gi|21229318|ref|NP_635240.1| - 0.0087 16.0 0.1 0.02 14.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4480) FeoC PF09012.5 gi|21229318|ref|NP_635240.1| - 0.016 14.8 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator Y_Y_Y PF07495.8 gi|21229318|ref|NP_635240.1| - 0.017 14.8 0.2 0.042 13.6 0.2 1.7 1 0 0 1 1 1 0 Y_Y_Y domain IncA PF04156.9 gi|21229318|ref|NP_635240.1| - 0.023 14.3 0.0 0.023 14.3 0.0 1.9 2 0 0 2 2 2 0 IncA protein RNA_pol_Rpc34 PF05158.7 gi|21229318|ref|NP_635240.1| - 0.029 13.5 0.2 0.047 12.8 0.2 1.3 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_Crp_2 PF13545.1 gi|21229318|ref|NP_635240.1| - 0.11 12.3 0.1 0.3 10.9 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Yae1_N PF09811.4 gi|21229319|ref|NP_635241.1| - 0.00079 18.8 0.6 0.15 11.6 0.1 2.2 2 0 0 2 2 2 2 Essential protein Yae1, N terminal Seadorna_Vp10 PF07322.6 gi|21229319|ref|NP_635241.1| - 0.0081 15.4 0.6 0.035 13.3 0.1 1.9 1 1 1 2 2 2 1 Seadornavirus Vp10 DUF4179 PF13786.1 gi|21229319|ref|NP_635241.1| - 0.04 14.1 1.6 0.04 14.1 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4179) HdeA PF06411.6 gi|21229319|ref|NP_635241.1| - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 HdeA/HdeB family Glyoxalase_2 PF12681.2 gi|21229320|ref|NP_635242.1| - 1.7e-11 44.6 0.0 2e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|21229320|ref|NP_635242.1| - 0.0024 17.8 0.0 0.028 14.4 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glycos_transf_2 PF00535.21 gi|21229321|ref|NP_635243.1| - 1.7e-13 50.6 0.2 1.5e-12 47.5 0.1 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|21229321|ref|NP_635243.1| - 0.0054 16.5 0.0 0.053 13.3 0.0 2.0 1 1 1 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|21229321|ref|NP_635243.1| - 0.075 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Polysacc_synt PF01943.12 gi|21229322|ref|NP_635244.1| - 4.8e-45 153.9 30.7 4.8e-45 153.9 21.3 2.9 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.1 gi|21229322|ref|NP_635244.1| - 2.1e-19 69.9 25.8 2.1e-19 69.9 17.9 2.7 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein MatE PF01554.13 gi|21229322|ref|NP_635244.1| - 2.3e-14 53.3 16.7 2.3e-14 53.3 11.6 3.9 3 1 2 5 5 5 2 MatE Polysacc_synt_C PF14667.1 gi|21229322|ref|NP_635244.1| - 8.8e-13 48.2 17.9 8.8e-13 48.2 12.4 4.6 3 1 1 4 4 4 1 Polysaccharide biosynthesis C-terminal domain DUF2873 PF11395.3 gi|21229322|ref|NP_635244.1| - 0.035 13.6 0.2 0.035 13.6 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) ATP-grasp_4 PF13535.1 gi|21229323|ref|NP_635245.1| - 1.2e-38 132.7 0.0 1.6e-38 132.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|21229323|ref|NP_635245.1| - 6.1e-07 28.4 0.0 9.5e-07 27.8 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|21229323|ref|NP_635245.1| - 8e-06 25.8 0.0 1.5e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_TupA PF14305.1 gi|21229323|ref|NP_635245.1| - 0.0011 18.3 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 TupA-like ATPgrasp Kinesin PF00225.18 gi|21229323|ref|NP_635245.1| - 0.0077 14.9 0.1 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain Dala_Dala_lig_C PF07478.8 gi|21229323|ref|NP_635245.1| - 0.04 13.2 0.1 0.23 10.8 0.1 2.0 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus THUMP PF02926.12 gi|21229323|ref|NP_635245.1| - 0.07 13.0 6.0 0.27 11.0 0.7 3.0 2 1 2 4 4 4 0 THUMP domain FF PF01846.14 gi|21229323|ref|NP_635245.1| - 0.31 11.0 2.9 0.85 9.6 0.4 2.6 2 0 0 2 2 2 0 FF domain SpoIIAA-like PF11964.3 gi|21229324|ref|NP_635246.1| - 4.1e-30 104.2 0.1 4.5e-30 104.1 0.1 1.0 1 0 0 1 1 1 1 SpoIIAA-like ABC_tran PF00005.22 gi|21229325|ref|NP_635247.1| - 8.3e-18 65.0 0.1 2e-17 63.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21229325|ref|NP_635247.1| - 1e-11 45.3 0.1 1.6e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|21229325|ref|NP_635247.1| - 3.8e-08 33.7 0.0 1.2e-07 32.0 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|21229325|ref|NP_635247.1| - 0.014 14.4 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SbcCD_C PF13558.1 gi|21229325|ref|NP_635247.1| - 0.089 12.7 0.0 0.27 11.1 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC2_membrane PF01061.19 gi|21229326|ref|NP_635248.1| - 5.7e-31 107.3 25.9 5.7e-31 107.3 17.9 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|21229326|ref|NP_635248.1| - 1.4e-15 57.2 30.3 1.4e-15 57.2 21.0 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|21229326|ref|NP_635248.1| - 1.5e-08 33.8 21.9 1.7e-08 33.7 15.2 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|21229326|ref|NP_635248.1| - 0.00026 20.2 29.4 0.00036 19.7 20.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein adh_short PF00106.20 gi|21229327|ref|NP_635249.1| - 6.2e-35 120.5 0.0 7.3e-35 120.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|21229327|ref|NP_635249.1| - 9.8e-21 74.6 0.0 1.2e-20 74.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|21229327|ref|NP_635249.1| - 1.9e-12 47.2 0.0 2.6e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.16 gi|21229327|ref|NP_635249.1| - 0.0002 20.8 0.1 0.00031 20.2 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Shikimate_DH PF01488.15 gi|21229327|ref|NP_635249.1| - 0.0015 18.6 0.4 0.0026 17.8 0.3 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|21229327|ref|NP_635249.1| - 0.005 17.2 0.3 0.0084 16.5 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.10 gi|21229327|ref|NP_635249.1| - 0.0088 14.9 0.1 0.01 14.7 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|21229327|ref|NP_635249.1| - 0.014 15.3 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 NADH(P)-binding 3Beta_HSD PF01073.14 gi|21229327|ref|NP_635249.1| - 0.027 13.1 0.1 0.038 12.6 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.14 gi|21229327|ref|NP_635249.1| - 0.057 12.4 0.1 0.11 11.5 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Meth_synt_2 PF01717.13 gi|21229327|ref|NP_635249.1| - 0.088 11.7 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain NAD_Gly3P_dh_N PF01210.18 gi|21229327|ref|NP_635249.1| - 0.14 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pribosyltran PF00156.22 gi|21229328|ref|NP_635250.1| - 2.1e-22 79.1 0.0 2.9e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.1 gi|21229328|ref|NP_635250.1| - 0.011 15.0 0.0 0.19 10.9 0.0 2.0 2 0 0 2 2 2 0 Phosphoribosyl transferase UPRTase PF14681.1 gi|21229328|ref|NP_635250.1| - 0.024 13.8 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Unstab_antitox PF09720.5 gi|21229328|ref|NP_635250.1| - 0.13 11.9 0.1 0.21 11.2 0.1 1.3 1 0 0 1 1 1 0 Putative addiction module component DUF3260 PF11658.3 gi|21229329|ref|NP_635251.1| - 0.12 10.5 0.0 0.12 10.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3260) DDE_3 PF13358.1 gi|21229330|ref|NP_635252.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease HTH_29 PF13551.1 gi|21229331|ref|NP_635253.1| - 2.7e-25 88.6 0.1 1.1e-24 86.7 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21229331|ref|NP_635253.1| - 1.2e-10 41.9 0.1 6.1e-09 36.5 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21229331|ref|NP_635253.1| - 9.3e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|21229331|ref|NP_635253.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|21229331|ref|NP_635253.1| - 0.04 13.9 0.0 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|21229331|ref|NP_635253.1| - 0.051 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21229331|ref|NP_635253.1| - 0.15 11.7 0.8 0.59 9.8 0.1 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB PHO4 PF01384.15 gi|21229332|ref|NP_635254.1| - 1.4e-101 339.4 41.6 1.6e-101 339.2 28.8 1.1 1 0 0 1 1 1 1 Phosphate transporter family DUF3318 PF11780.3 gi|21229332|ref|NP_635254.1| - 1.2 8.7 6.3 0.41 10.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3318) PhoU_div PF01865.11 gi|21229333|ref|NP_635255.1| - 6.3e-51 172.5 0.6 7.1e-51 172.4 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 gi|21229333|ref|NP_635255.1| - 0.00068 20.0 0.6 1.1 9.7 0.1 2.4 2 0 0 2 2 2 2 PhoU domain DUF2970 PF11174.3 gi|21229334|ref|NP_635256.1| - 1.2 8.7 6.8 0.22 11.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) HTH_3 PF01381.17 gi|21229335|ref|NP_635257.1| - 5.2e-14 51.8 0.1 6.9e-14 51.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|21229335|ref|NP_635257.1| - 1.4e-10 41.0 0.1 1.7e-10 40.7 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|21229335|ref|NP_635257.1| - 5.4e-06 26.5 0.0 5.4e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|21229335|ref|NP_635257.1| - 1.3e-05 25.3 0.0 2.1e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.7 gi|21229335|ref|NP_635257.1| - 0.0038 16.8 0.0 0.011 15.3 0.0 1.6 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.1 gi|21229335|ref|NP_635257.1| - 0.0058 15.9 0.1 0.01 15.2 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.1 gi|21229335|ref|NP_635257.1| - 0.015 14.9 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Crp_2 PF13545.1 gi|21229335|ref|NP_635257.1| - 0.02 14.7 0.0 0.031 14.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_10 PF04967.7 gi|21229335|ref|NP_635257.1| - 0.033 13.7 0.1 0.19 11.3 0.0 2.0 2 0 0 2 2 2 0 HTH DNA binding domain Sigma70_r4 PF04545.11 gi|21229335|ref|NP_635257.1| - 0.091 12.0 0.0 0.23 10.8 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.10 gi|21229335|ref|NP_635257.1| - 0.097 12.5 0.2 0.27 11.1 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_AsnC-type PF13404.1 gi|21229335|ref|NP_635257.1| - 0.1 12.1 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HK PF02110.10 gi|21229336|ref|NP_635258.1| - 2.1e-82 275.9 2.7 2.4e-82 275.8 1.8 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.7 gi|21229336|ref|NP_635258.1| - 6e-09 35.4 0.6 7e-09 35.2 0.4 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.12 gi|21229336|ref|NP_635258.1| - 8.7e-06 25.1 1.0 1.4e-05 24.5 0.7 1.3 1 1 0 1 1 1 1 Carbohydrate kinase TMP-TENI PF02581.12 gi|21229337|ref|NP_635259.1| - 2.4e-61 206.0 1.6 3e-61 205.6 1.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI Ribul_P_3_epim PF00834.14 gi|21229337|ref|NP_635259.1| - 0.00059 18.9 0.5 0.0014 17.7 0.1 1.8 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family NanE PF04131.9 gi|21229337|ref|NP_635259.1| - 0.0013 17.7 1.9 0.0018 17.2 0.6 1.7 1 1 1 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase QRPTase_C PF01729.14 gi|21229337|ref|NP_635259.1| - 0.0055 16.2 1.2 0.0086 15.6 0.5 1.6 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain Oxidored_FMN PF00724.15 gi|21229337|ref|NP_635259.1| - 0.045 12.7 0.7 0.41 9.6 0.1 2.0 1 1 0 2 2 2 0 NADH:flavin oxidoreductase / NADH oxidase family PcrB PF01884.12 gi|21229337|ref|NP_635259.1| - 0.08 12.1 5.7 0.45 9.7 0.5 2.4 1 1 1 2 2 2 0 PcrB family His_biosynth PF00977.16 gi|21229337|ref|NP_635259.1| - 0.12 11.6 6.4 0.15 11.2 0.4 2.4 1 1 1 2 2 2 0 Histidine biosynthesis protein HTH_29 PF13551.1 gi|21229338|ref|NP_635260.1| - 8.3e-18 64.5 0.1 2e-17 63.3 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_33 PF13592.1 gi|21229338|ref|NP_635260.1| - 2.5e-16 58.9 1.3 1.1e-14 53.6 0.0 2.6 2 1 1 3 3 3 1 Winged helix-turn helix HTH_23 PF13384.1 gi|21229338|ref|NP_635260.1| - 8e-14 50.7 0.0 1.2e-12 46.9 0.0 2.4 2 1 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.1 gi|21229338|ref|NP_635260.1| - 1.2e-13 50.7 0.1 1.6e-12 47.1 0.0 2.3 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_32 PF13565.1 gi|21229338|ref|NP_635260.1| - 8.1e-13 48.9 0.0 3.1e-11 43.8 0.0 2.2 2 1 1 3 3 3 2 Homeodomain-like domain Terminase_5 PF06056.7 gi|21229338|ref|NP_635260.1| - 1.8e-05 24.1 0.0 3.8e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.1 gi|21229338|ref|NP_635260.1| - 5.4e-05 22.6 0.0 0.00012 21.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_psq PF05225.11 gi|21229338|ref|NP_635260.1| - 0.00037 19.9 0.0 0.0029 17.1 0.0 2.1 2 0 0 2 2 2 1 helix-turn-helix, Psq domain LZ_Tnp_IS481 PF13011.1 gi|21229338|ref|NP_635260.1| - 0.0005 20.3 0.1 0.0031 17.8 0.0 2.0 2 0 0 2 2 2 1 leucine-zipper of insertion element IS481 HTH_Tnp_4 PF13613.1 gi|21229338|ref|NP_635260.1| - 0.00066 19.1 0.0 0.0015 18.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.7 gi|21229338|ref|NP_635260.1| - 0.00094 18.7 0.0 0.0025 17.4 0.0 1.8 1 0 0 1 1 1 1 HTH domain HTH_Tnp_IS630 PF01710.11 gi|21229338|ref|NP_635260.1| - 0.0011 18.6 0.0 0.0024 17.5 0.0 1.6 2 0 0 2 2 2 1 Transposase HTH_30 PF13556.1 gi|21229338|ref|NP_635260.1| - 0.0012 18.3 0.0 0.0025 17.3 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_Tnp_1 PF01527.15 gi|21229338|ref|NP_635260.1| - 0.0014 18.5 0.6 0.0027 17.6 0.0 1.8 2 0 0 2 2 1 1 Transposase HTH_10 PF04967.7 gi|21229338|ref|NP_635260.1| - 0.0023 17.5 0.1 4.5 6.9 0.0 3.1 3 0 0 3 3 3 1 HTH DNA binding domain DUF2481 PF10654.4 gi|21229338|ref|NP_635260.1| - 0.0055 16.3 0.0 1.4 8.6 0.0 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF2481) HTH_17 PF12728.2 gi|21229338|ref|NP_635260.1| - 0.007 16.6 0.0 0.051 13.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_40 PF14493.1 gi|21229338|ref|NP_635260.1| - 0.0084 16.3 0.0 0.018 15.2 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|21229338|ref|NP_635260.1| - 0.0088 15.1 0.0 0.09 11.9 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 Mga PF05043.8 gi|21229338|ref|NP_635260.1| - 0.009 16.2 0.6 1.9 8.8 0.0 2.5 2 1 0 2 2 2 1 Mga helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|21229338|ref|NP_635260.1| - 0.011 15.2 0.0 0.024 14.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_36 PF13730.1 gi|21229338|ref|NP_635260.1| - 0.017 15.2 0.0 0.048 13.8 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain DUF2089 PF09862.4 gi|21229338|ref|NP_635260.1| - 0.02 14.6 0.1 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) SpoIIID PF12116.3 gi|21229338|ref|NP_635260.1| - 0.027 14.3 0.1 1.9 8.4 0.0 2.4 2 0 0 2 2 2 0 Stage III sporulation protein D HTH_7 PF02796.10 gi|21229338|ref|NP_635260.1| - 0.031 14.1 0.0 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase MarR_2 PF12802.2 gi|21229338|ref|NP_635260.1| - 0.039 13.6 0.0 0.21 11.2 0.0 2.1 3 0 0 3 3 2 0 MarR family HTH_IclR PF09339.5 gi|21229338|ref|NP_635260.1| - 0.05 13.1 0.0 0.094 12.3 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain GntR PF00392.16 gi|21229338|ref|NP_635260.1| - 0.052 13.0 0.0 0.29 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family TrmB PF01978.14 gi|21229338|ref|NP_635260.1| - 0.053 13.2 0.1 0.21 11.3 0.0 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_3 PF01381.17 gi|21229338|ref|NP_635260.1| - 0.074 12.9 0.0 0.26 11.1 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix HTH_24 PF13412.1 gi|21229338|ref|NP_635260.1| - 0.12 11.8 0.0 1.3 8.5 0.0 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DDE_3 PF13358.1 gi|21229339|ref|NP_635261.1| - 5.9e-19 68.2 0.0 7.8e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF308 PF03729.8 gi|21229340|ref|NP_635262.1| - 3.8e-17 62.0 49.9 8.4e-12 44.9 10.0 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) P12 PF12669.2 gi|21229341|ref|NP_635263.1| - 0.025 14.7 0.9 0.038 14.1 0.6 1.4 1 0 0 1 1 1 0 Virus attachment protein p12 family Fer2 PF00111.22 gi|21229341|ref|NP_635263.1| - 0.05 13.3 0.4 0.071 12.8 0.3 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Reprolysin_3 PF13582.1 gi|21229341|ref|NP_635263.1| - 0.062 13.8 0.1 0.087 13.3 0.1 1.3 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Radical_SAM PF04055.16 gi|21229342|ref|NP_635264.1| - 4.1e-16 59.5 0.0 3.2e-15 56.6 0.0 2.2 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|21229342|ref|NP_635264.1| - 3.3e-10 40.2 0.0 6.7e-10 39.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|21229342|ref|NP_635264.1| - 3.1e-07 30.4 0.0 9.1e-07 28.9 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF308 PF03729.8 gi|21229343|ref|NP_635265.1| - 3.1e-17 62.3 51.8 1.1e-11 44.5 10.4 3.2 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) SieB PF14163.1 gi|21229344|ref|NP_635266.1| - 0.00057 19.4 1.4 0.00057 19.4 1.0 2.1 1 1 0 2 2 2 1 Superinfection exclusion protein B CybS PF05328.7 gi|21229344|ref|NP_635266.1| - 0.81 9.3 5.0 0.76 9.3 1.3 2.0 2 0 0 2 2 2 0 CybS DUF131 PF01998.12 gi|21229345|ref|NP_635267.1| - 0.1 11.9 0.2 0.1 11.9 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function DUF131 Tmemb_14 PF03647.8 gi|21229345|ref|NP_635267.1| - 1.8 8.9 7.8 1.4 9.3 0.1 2.7 2 1 0 2 2 2 0 Transmembrane proteins 14C RNA_pol_Rpb4 PF03874.11 gi|21229346|ref|NP_635268.1| - 9e-09 35.3 48.5 0.076 13.0 0.2 13.7 13 2 0 14 14 14 3 RNA polymerase Rpb4 DUF496 PF04363.7 gi|21229346|ref|NP_635268.1| - 8.8e-06 25.4 38.5 0.055 13.2 0.7 8.7 4 3 5 10 10 10 3 Protein of unknown function (DUF496) DUF2286 PF10051.4 gi|21229346|ref|NP_635268.1| - 0.00013 21.5 58.0 3.9 7.1 0.2 15.9 3 3 13 17 17 17 2 Uncharacterized protein conserved in archaea (DUF2286) DUF3377 PF11857.3 gi|21229346|ref|NP_635268.1| - 0.0028 17.2 0.1 63 3.3 0.0 6.0 5 0 0 5 5 5 0 Domain of unknown function (DUF3377) 7tm_4 PF13853.1 gi|21229346|ref|NP_635268.1| - 0.0033 17.2 0.0 3.7 7.3 0.0 4.0 5 0 0 5 5 5 1 Olfactory receptor Mo-co_dimer PF03404.11 gi|21229346|ref|NP_635268.1| - 0.0036 16.9 0.8 5.2 6.7 0.0 5.0 5 1 1 6 6 6 1 Mo-co oxidoreductase dimerisation domain Peptidase_S51 PF03575.12 gi|21229346|ref|NP_635268.1| - 0.0037 17.0 0.2 5.7 6.6 0.0 4.7 4 0 0 4 4 4 1 Peptidase family S51 TPM PF04536.9 gi|21229346|ref|NP_635268.1| - 0.0073 16.1 1.7 5.1 6.9 0.0 4.5 4 1 0 4 4 4 1 TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase PAS PF00989.19 gi|21229346|ref|NP_635268.1| - 0.008 15.9 0.1 7.3 6.4 0.0 4.3 3 1 2 5 5 5 1 PAS fold Pox_A14 PF05767.7 gi|21229346|ref|NP_635268.1| - 0.016 15.1 0.5 1.2e+02 2.7 0.0 5.4 4 1 0 4 4 4 0 Poxvirus virion envelope protein A14 DUF1485 PF07364.7 gi|21229346|ref|NP_635268.1| - 0.035 13.3 0.0 0.66 9.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1485) DUF3469 PF11952.3 gi|21229346|ref|NP_635268.1| - 0.08 12.6 2.8 2.2 8.0 0.0 4.5 4 1 0 4 4 3 0 Protein of unknown function (DUF3469) Catalase-rel PF06628.7 gi|21229346|ref|NP_635268.1| - 0.23 11.3 7.7 4.8 7.1 0.1 6.1 7 1 1 8 8 8 0 Catalase-related immune-responsive Fic PF02661.13 gi|21229346|ref|NP_635268.1| - 0.29 11.8 7.0 46 4.8 0.0 6.4 5 3 0 5 5 5 0 Fic/DOC family TFIIE_beta PF02186.10 gi|21229346|ref|NP_635268.1| - 0.59 10.1 12.9 1.9 8.5 0.0 6.5 4 2 2 6 6 5 0 TFIIE beta subunit core domain CFTR_R PF14396.1 gi|21229346|ref|NP_635268.1| - 0.73 9.1 7.2 0.97 8.7 0.0 4.2 4 1 1 5 5 5 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain Cytochrome-c551 PF10643.4 gi|21229346|ref|NP_635268.1| - 8.2 5.6 7.9 18 4.5 0.1 3.8 3 1 1 4 4 4 0 Photosystem P840 reaction-centre cytochrome c-551 DDE_Tnp_IS66 PF03050.9 gi|21229347|ref|NP_635269.1| - 7.1e-72 241.8 0.0 8.4e-72 241.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-IS66 PF13005.2 gi|21229347|ref|NP_635269.1| - 3.8e-10 39.5 5.9 1.1e-09 38.1 4.1 1.8 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 DDE_Tnp_IS240 PF13610.1 gi|21229347|ref|NP_635269.1| - 5.3e-05 23.2 1.6 0.42 10.5 0.1 3.1 3 0 0 3 3 3 2 DDE domain Apolipoprotein PF01442.13 gi|21229347|ref|NP_635269.1| - 0.025 14.0 0.3 0.042 13.3 0.2 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain RBD-FIP PF09457.5 gi|21229347|ref|NP_635269.1| - 0.29 10.9 2.3 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 FIP domain zf-RING_5 PF14634.1 gi|21229347|ref|NP_635269.1| - 0.68 9.7 7.5 1.4 8.6 0.0 3.0 2 1 0 2 2 2 0 zinc-RING finger domain DnaB_C PF03796.10 gi|21229348|ref|NP_635270.1| - 0.062 12.1 0.0 0.07 11.9 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Sugarporin_N PF11471.3 gi|21229348|ref|NP_635270.1| - 0.07 12.7 0.1 0.097 12.3 0.1 1.2 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.7 gi|21229348|ref|NP_635270.1| - 0.092 13.1 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 SlyX PEGSRP PF07623.6 gi|21229348|ref|NP_635270.1| - 0.22 10.8 0.4 0.22 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Pentapeptide PF00805.17 gi|21229349|ref|NP_635271.1| - 1.5e-27 94.3 12.4 4.8e-10 38.4 3.6 4.5 2 1 2 4 4 4 4 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.1 gi|21229349|ref|NP_635271.1| - 5e-22 77.4 5.9 3e-10 39.7 0.4 2.8 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.1 gi|21229349|ref|NP_635271.1| - 6.7e-15 54.7 1.9 4.4e-05 23.2 0.0 4.0 1 1 2 3 3 3 3 Pentapeptide repeats (9 copies) DUF4145 PF13643.1 gi|21229350|ref|NP_635272.1| - 1e-07 31.7 0.0 1.5e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) Cas_Cas1 PF01867.11 gi|21229351|ref|NP_635273.1| - 4.7e-67 226.0 0.0 7e-67 225.4 0.0 1.2 1 0 0 1 1 1 1 CRISPR associated protein Cas1 ER PF01133.12 gi|21229351|ref|NP_635273.1| - 0.062 13.0 0.0 0.19 11.4 0.0 1.8 1 0 0 1 1 1 0 Enhancer of rudimentary DUF2779 PF11074.3 gi|21229352|ref|NP_635274.1| - 0.023 14.7 0.6 0.023 14.7 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function(DUF2779) DRIM PF07539.7 gi|21229352|ref|NP_635274.1| - 0.22 10.9 3.5 0.27 10.6 1.0 2.2 2 1 0 2 2 2 0 Down-regulated in metastasis HNH PF01844.18 gi|21229354|ref|NP_635276.1| - 0.00012 21.8 4.0 0.0007 19.4 2.8 2.0 1 1 0 1 1 1 1 HNH endonuclease Cytochrom_NNT PF03264.9 gi|21229354|ref|NP_635276.1| - 0.019 14.4 1.1 0.022 14.1 0.8 1.2 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region DUF2197 PF09963.4 gi|21229354|ref|NP_635276.1| - 0.18 11.7 1.3 0.35 10.8 0.9 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) Elf1 PF05129.8 gi|21229354|ref|NP_635276.1| - 0.23 11.1 3.0 0.33 10.6 2.1 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Cytochrome_C7 PF14522.1 gi|21229354|ref|NP_635276.1| - 0.86 9.2 4.3 0.34 10.5 0.4 1.7 1 1 0 1 1 1 0 Cytochrome c7 DUF968 PF06147.6 gi|21229354|ref|NP_635276.1| - 0.89 9.4 3.3 2 8.2 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF968) DNA_pol_B PF00136.16 gi|21229355|ref|NP_635277.1| - 2.8e-09 36.3 0.1 7.4e-05 21.7 0.0 2.6 2 1 0 2 2 2 2 DNA polymerase family B DNA_pol_B_2 PF03175.8 gi|21229355|ref|NP_635277.1| - 3.1e-07 29.4 0.6 3.1e-07 29.4 0.4 1.8 2 0 0 2 2 2 1 DNA polymerase type B, organellar and viral GreA_GreB_N PF03449.10 gi|21229356|ref|NP_635278.1| - 0.056 13.5 0.0 15 5.7 0.0 3.3 2 1 0 3 3 3 0 Transcription elongation factor, N-terminal PspA_IM30 PF04012.7 gi|21229357|ref|NP_635279.1| - 0.013 14.8 0.5 0.016 14.5 0.3 1.1 1 0 0 1 1 1 0 PspA/IM30 family SelP_N PF04592.9 gi|21229357|ref|NP_635279.1| - 0.036 13.4 0.2 0.038 13.3 0.2 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Fib_alpha PF08702.5 gi|21229357|ref|NP_635279.1| - 0.039 14.0 0.7 0.047 13.8 0.5 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF836 PF05768.9 gi|21229357|ref|NP_635279.1| - 0.047 13.9 1.8 0.059 13.6 1.3 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF3357 PF11837.3 gi|21229358|ref|NP_635280.1| - 0.0099 15.7 0.0 0.04 13.7 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF3357) Endonuc_Holl PF10107.4 gi|21229359|ref|NP_635281.1| - 2.3e-65 219.0 0.2 2.8e-65 218.7 0.2 1.0 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase Med26 PF08711.6 gi|21229359|ref|NP_635281.1| - 0.12 11.8 0.2 3.7 7.1 0.1 2.3 1 1 0 1 1 1 0 TFIIS helical bundle-like domain MS_channel PF00924.13 gi|21229361|ref|NP_635283.1| - 1.3e-36 125.9 0.1 1.3e-36 125.9 0.1 1.4 2 0 0 2 2 2 1 Mechanosensitive ion channel SieB PF14163.1 gi|21229361|ref|NP_635283.1| - 0.0045 16.5 0.4 0.0073 15.8 0.3 1.3 1 0 0 1 1 1 1 Superinfection exclusion protein B DUF4293 PF14126.1 gi|21229361|ref|NP_635283.1| - 0.049 13.5 4.2 0.085 12.7 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) MFS_1 PF07690.11 gi|21229361|ref|NP_635283.1| - 0.091 11.4 4.4 0.13 10.9 3.1 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF421 PF04239.7 gi|21229362|ref|NP_635284.1| - 1.4e-18 66.2 0.1 1.8e-18 65.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF421) YpzI PF14140.1 gi|21229362|ref|NP_635284.1| - 0.033 13.6 0.0 0.059 12.8 0.0 1.4 1 0 0 1 1 1 0 YpzI-like protein MS_channel PF00924.13 gi|21229363|ref|NP_635285.1| - 9.5e-29 100.2 3.4 2.2e-28 99.0 2.3 1.6 1 1 0 1 1 1 1 Mechanosensitive ion channel AzlC PF03591.9 gi|21229364|ref|NP_635286.1| - 8e-45 152.2 6.9 8e-45 152.2 4.8 1.7 2 0 0 2 2 2 1 AzlC protein Sulfate_tra_GLY PF13792.1 gi|21229364|ref|NP_635286.1| - 1.9 8.2 7.1 0.24 11.1 1.6 2.1 2 0 0 2 2 2 0 Sulfate transporter N-terminal domain with GLY motif DUF1212 PF06738.7 gi|21229364|ref|NP_635286.1| - 7 6.0 10.8 3 7.2 0.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1212) AzlD PF05437.7 gi|21229365|ref|NP_635287.1| - 9.3e-22 76.8 6.2 1e-21 76.6 4.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) NIR_SIR PF01077.17 gi|21229366|ref|NP_635288.1| - 2.2e-36 124.5 0.4 3.2e-36 124.0 0.3 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|21229366|ref|NP_635288.1| - 4.5e-20 71.0 0.0 8.2e-20 70.2 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.22 gi|21229366|ref|NP_635288.1| - 3.1e-13 48.6 13.3 4.2e-07 29.3 1.6 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21229366|ref|NP_635288.1| - 5e-10 39.6 29.1 1.4e-08 35.0 9.0 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229366|ref|NP_635288.1| - 2.5e-09 36.7 13.4 2.5e-09 36.7 9.3 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21229366|ref|NP_635288.1| - 2.9e-09 36.3 18.6 2.3e-05 24.0 1.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21229366|ref|NP_635288.1| - 1.1e-07 32.0 12.7 1.1e-07 32.0 8.8 2.4 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229366|ref|NP_635288.1| - 3e-06 26.8 14.5 9.7e-05 22.0 2.7 3.7 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|21229366|ref|NP_635288.1| - 2.9e-05 23.8 23.2 0.0014 18.4 3.0 2.9 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21229366|ref|NP_635288.1| - 0.00063 19.7 17.1 0.026 14.5 0.1 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229366|ref|NP_635288.1| - 0.0024 18.4 0.4 0.0024 18.4 0.3 4.1 4 1 0 4 4 4 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|21229366|ref|NP_635288.1| - 0.0057 16.8 13.6 0.017 15.3 2.6 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21229366|ref|NP_635288.1| - 0.023 15.1 4.4 0.023 15.1 3.1 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21229366|ref|NP_635288.1| - 0.031 14.8 24.4 0.17 12.5 3.3 3.7 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229366|ref|NP_635288.1| - 0.06 14.0 21.6 0.11 13.2 2.2 2.9 2 1 1 3 3 2 0 4Fe-4S double cluster binding domain DUF561 PF04481.7 gi|21229366|ref|NP_635288.1| - 0.1 11.5 0.0 0.18 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Fer4_13 PF13370.1 gi|21229366|ref|NP_635288.1| - 2 8.8 19.1 1 9.7 2.5 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|21229366|ref|NP_635288.1| - 3.1 8.2 22.2 1.4 9.3 1.7 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain DDE_Tnp_1 PF01609.16 gi|21229367|ref|NP_635289.1| - 7.9e-10 38.6 1.5 1.3e-09 37.8 1.1 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.4 gi|21229367|ref|NP_635289.1| - 0.0054 16.5 0.8 0.034 13.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) PAH PF02671.16 gi|21229367|ref|NP_635289.1| - 0.037 13.6 1.5 0.44 10.1 0.0 2.9 3 0 0 3 3 3 0 Paired amphipathic helix repeat 7TM_GPCR_Srt PF10321.4 gi|21229368|ref|NP_635290.1| - 0.075 11.7 0.0 0.089 11.5 0.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt DUF342 PF03961.8 gi|21229369|ref|NP_635291.1| - 0.0006 18.3 14.7 0.0027 16.2 3.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF342) Nitroreductase PF00881.19 gi|21229370|ref|NP_635292.1| - 9.2e-35 119.8 0.0 1.1e-34 119.6 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family Hexapep PF00132.19 gi|21229371|ref|NP_635293.1| - 1e-10 40.6 12.2 6.6e-08 31.7 2.3 2.6 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|21229371|ref|NP_635293.1| - 0.0039 16.7 12.0 0.029 13.9 2.2 3.3 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase RsgI_N PF12791.2 gi|21229371|ref|NP_635293.1| - 0.13 11.9 0.0 13 5.5 0.0 2.5 2 0 0 2 2 2 0 Anti-sigma factor N-terminus FeThRed_B PF02943.10 gi|21229372|ref|NP_635294.1| - 9.6e-23 79.9 0.8 9.6e-23 79.9 0.5 1.5 2 0 0 2 2 2 1 Ferredoxin thioredoxin reductase catalytic beta chain RecR PF02132.10 gi|21229372|ref|NP_635294.1| - 0.01 15.2 0.6 0.021 14.2 0.4 1.5 1 0 0 1 1 1 0 RecR protein HypA PF01155.14 gi|21229372|ref|NP_635294.1| - 0.038 13.6 1.0 0.038 13.6 0.7 2.0 2 0 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Rubredoxin PF00301.15 gi|21229372|ref|NP_635294.1| - 3.5 7.5 17.7 1.6 8.6 5.7 3.6 2 1 0 2 2 2 0 Rubredoxin Glutaredoxin PF00462.19 gi|21229373|ref|NP_635295.1| - 1.8e-12 47.0 0.1 2.8e-12 46.4 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.1 gi|21229373|ref|NP_635295.1| - 0.00071 19.7 0.0 0.00087 19.4 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.1 gi|21229373|ref|NP_635295.1| - 0.0061 16.3 0.3 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Thioredoxin domain ArsC PF03960.10 gi|21229373|ref|NP_635295.1| - 0.029 14.4 0.0 1.5 8.8 0.0 2.1 2 0 0 2 2 2 0 ArsC family GST_N_2 PF13409.1 gi|21229373|ref|NP_635295.1| - 0.038 13.9 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.1 gi|21229373|ref|NP_635295.1| - 0.14 12.3 0.1 0.24 11.6 0.1 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain MFS_1 PF07690.11 gi|21229374|ref|NP_635296.1| - 2.1e-71 240.4 69.0 1.8e-56 191.3 30.2 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|21229374|ref|NP_635296.1| - 6.3e-13 48.1 14.5 6.3e-13 48.1 10.1 2.9 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.1 gi|21229374|ref|NP_635296.1| - 2.6e-08 32.7 40.8 2.1e-05 23.1 16.0 2.8 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_3 PF05977.8 gi|21229374|ref|NP_635296.1| - 8.4e-08 30.7 4.6 8.4e-08 30.7 3.2 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector PUCC PF03209.10 gi|21229374|ref|NP_635296.1| - 7.7e-06 24.8 17.1 2.1e-05 23.4 3.9 2.4 2 1 0 2 2 2 2 PUCC protein MFS_1_like PF12832.2 gi|21229374|ref|NP_635296.1| - 1.8e-05 24.4 1.4 0.0009 18.9 0.1 3.1 2 0 0 2 2 2 1 MFS_1 like family OATP PF03137.15 gi|21229374|ref|NP_635296.1| - 0.75 7.7 20.3 0.17 9.9 1.1 3.4 2 2 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF607 PF04678.8 gi|21229375|ref|NP_635297.1| - 0.011 15.6 3.4 0.014 15.3 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF607 DUF4337 PF14235.1 gi|21229375|ref|NP_635297.1| - 0.032 14.0 5.0 0.037 13.8 3.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Folate_carrier PF01770.13 gi|21229375|ref|NP_635297.1| - 0.07 11.6 0.5 0.077 11.4 0.4 1.0 1 0 0 1 1 1 0 Reduced folate carrier TRAP-gamma PF07074.7 gi|21229375|ref|NP_635297.1| - 0.12 11.8 7.1 0.17 11.3 4.9 1.2 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) GrpE PF01025.14 gi|21229375|ref|NP_635297.1| - 0.12 11.8 7.4 0.13 11.7 5.1 1.1 1 0 0 1 1 1 0 GrpE HCO3_cotransp PF00955.16 gi|21229375|ref|NP_635297.1| - 0.14 10.7 0.1 0.16 10.5 0.1 1.0 1 0 0 1 1 1 0 HCO3- transporter family DUF106 PF01956.11 gi|21229375|ref|NP_635297.1| - 0.15 11.5 10.3 0.21 11.1 7.2 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF106 OmpH PF03938.9 gi|21229375|ref|NP_635297.1| - 0.16 11.9 16.8 0.2 11.5 11.6 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2547 PF10818.3 gi|21229375|ref|NP_635297.1| - 0.16 12.6 1.0 0.19 12.3 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) Raftlin PF15250.1 gi|21229375|ref|NP_635297.1| - 0.2 10.1 2.7 0.23 9.9 1.9 1.0 1 0 0 1 1 1 0 Raftlin DUF4407 PF14362.1 gi|21229375|ref|NP_635297.1| - 0.2 10.5 3.6 0.23 10.3 2.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RR_TM4-6 PF06459.7 gi|21229375|ref|NP_635297.1| - 0.31 10.9 3.8 0.33 10.8 2.7 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CAF-1_p150 PF11600.3 gi|21229375|ref|NP_635297.1| - 0.32 10.3 24.5 0.37 10.1 17.0 1.0 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal APG6 PF04111.7 gi|21229375|ref|NP_635297.1| - 0.33 9.9 7.2 0.38 9.7 5.0 1.0 1 0 0 1 1 1 0 Autophagy protein Apg6 Borrelia_P83 PF05262.6 gi|21229375|ref|NP_635297.1| - 0.33 9.1 12.5 0.39 8.9 8.7 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein AAA_13 PF13166.1 gi|21229375|ref|NP_635297.1| - 0.34 9.3 6.3 0.38 9.1 4.4 1.0 1 0 0 1 1 1 0 AAA domain Ufd2P_core PF10408.4 gi|21229375|ref|NP_635297.1| - 0.45 8.6 7.1 0.48 8.6 4.9 1.0 1 0 0 1 1 1 0 Ubiquitin elongating factor core AAA_11 PF13086.1 gi|21229375|ref|NP_635297.1| - 0.48 9.9 7.4 0.54 9.7 5.2 1.0 1 0 0 1 1 1 0 AAA domain 60KD_IMP PF02096.15 gi|21229375|ref|NP_635297.1| - 0.53 9.9 8.0 0.73 9.4 5.5 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein PEARLI-4 PF05278.7 gi|21229375|ref|NP_635297.1| - 0.54 9.5 12.8 0.87 8.8 8.9 1.3 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Spc24 PF08286.6 gi|21229375|ref|NP_635297.1| - 0.64 9.7 4.7 0.75 9.5 3.3 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 ING PF12998.2 gi|21229375|ref|NP_635297.1| - 0.66 10.2 8.6 0.92 9.8 6.0 1.2 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding CDC45 PF02724.9 gi|21229375|ref|NP_635297.1| - 0.67 7.9 7.8 0.72 7.8 5.4 1.0 1 0 0 1 1 1 0 CDC45-like protein EMP24_GP25L PF01105.19 gi|21229375|ref|NP_635297.1| - 0.7 9.5 12.4 6.1 6.5 8.6 1.8 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD ATG16 PF08614.6 gi|21229375|ref|NP_635297.1| - 0.7 9.6 14.0 0.81 9.4 9.7 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF4446 PF14584.1 gi|21229375|ref|NP_635297.1| - 0.72 9.6 6.5 0.98 9.2 4.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF3552 PF12072.3 gi|21229375|ref|NP_635297.1| - 0.78 8.9 18.3 0.93 8.6 12.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) DUF3464 PF11947.3 gi|21229375|ref|NP_635297.1| - 0.78 9.1 4.6 0.92 8.9 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3464) DUF773 PF05600.7 gi|21229375|ref|NP_635297.1| - 0.96 8.1 13.2 1.2 7.8 9.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF773) OATP PF03137.15 gi|21229375|ref|NP_635297.1| - 1.1 7.2 4.7 1.1 7.2 3.2 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Sec62 PF03839.11 gi|21229375|ref|NP_635297.1| - 1.4 8.3 7.9 1.6 8.1 5.5 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Tox-ODYAM1 PF15642.1 gi|21229375|ref|NP_635297.1| - 1.6 7.3 6.1 1.7 7.1 4.2 1.1 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus SPAM PF02090.10 gi|21229375|ref|NP_635297.1| - 1.6 8.7 15.8 2.1 8.3 10.9 1.1 1 0 0 1 1 1 0 Salmonella surface presentation of antigen gene type M protein DUF1943 PF09172.6 gi|21229375|ref|NP_635297.1| - 1.8 7.3 5.9 1.9 7.2 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) DUF4200 PF13863.1 gi|21229375|ref|NP_635297.1| - 1.9 8.4 27.5 4.5 7.2 19.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) RNA_pol_Rpc4 PF05132.9 gi|21229375|ref|NP_635297.1| - 2 8.4 6.2 2.4 8.1 4.3 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF724 PF05266.9 gi|21229375|ref|NP_635297.1| - 2.7 7.5 14.1 3.2 7.3 9.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF3523 PF12037.3 gi|21229375|ref|NP_635297.1| - 2.8 6.8 22.2 3.4 6.5 15.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF2203 PF09969.4 gi|21229375|ref|NP_635297.1| - 2.9 8.1 8.9 3.6 7.8 6.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Peptidase_S49_N PF08496.5 gi|21229375|ref|NP_635297.1| - 4.8 6.9 11.9 6.1 6.6 8.2 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal EzrA PF06160.7 gi|21229375|ref|NP_635297.1| - 5 5.1 13.1 5.6 5.0 9.1 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DDRGK PF09756.4 gi|21229375|ref|NP_635297.1| - 5.4 6.3 25.4 6.6 6.0 17.6 1.1 1 0 0 1 1 1 0 DDRGK domain DUF342 PF03961.8 gi|21229375|ref|NP_635297.1| - 5.5 5.2 7.6 6.2 5.1 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF342) eIF-3_zeta PF05091.7 gi|21229375|ref|NP_635297.1| - 6 5.3 12.6 6.7 5.2 8.7 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) DUF3513 PF12026.3 gi|21229375|ref|NP_635297.1| - 8.6 5.8 9.7 12 5.3 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3513) DUF21 PF01595.15 gi|21229376|ref|NP_635298.1| - 1.9e-35 121.8 1.3 2.6e-35 121.3 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF21 DUF21 PF01595.15 gi|21229377|ref|NP_635299.1| - 3.5e-52 176.3 7.3 5.1e-52 175.8 5.1 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF21 CorC_HlyC PF03471.12 gi|21229377|ref|NP_635299.1| - 1.3e-20 72.9 0.0 3.4e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.23 gi|21229377|ref|NP_635299.1| - 8.1e-20 70.3 1.1 7.2e-09 35.3 0.0 2.6 2 0 0 2 2 2 2 CBS domain Nitroreductase PF00881.19 gi|21229378|ref|NP_635300.1| - 2.8e-17 63.0 0.0 1.6e-08 34.5 0.0 2.3 2 0 0 2 2 2 2 Nitroreductase family DJ-1_PfpI PF01965.19 gi|21229379|ref|NP_635301.1| - 2.3e-31 108.2 0.1 2.9e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|21229379|ref|NP_635301.1| - 8.3e-11 41.4 0.0 1.1e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Putative amidotransferase Exonuc_VII_L PF02601.10 gi|21229379|ref|NP_635301.1| - 0.018 14.2 0.1 0.027 13.6 0.1 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit PS_pyruv_trans PF04230.8 gi|21229379|ref|NP_635301.1| - 0.078 12.6 0.0 0.094 12.4 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF92 PF01940.11 gi|21229380|ref|NP_635302.1| - 3.6e-69 232.3 15.7 3.6e-69 232.3 10.9 2.0 2 0 0 2 2 2 2 Integral membrane protein DUF92 Pyr_redox_2 PF07992.9 gi|21229381|ref|NP_635303.1| - 3.7e-29 102.0 0.0 5.6e-13 49.2 0.0 3.5 2 1 2 4 4 4 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|21229381|ref|NP_635303.1| - 4.1e-21 75.0 1.4 1.5e-20 73.2 0.1 2.5 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|21229381|ref|NP_635303.1| - 1.6e-12 47.6 0.2 4.7e-12 46.1 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.1 gi|21229381|ref|NP_635303.1| - 4.8e-05 22.4 0.1 0.045 12.6 0.1 2.5 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.19 gi|21229381|ref|NP_635303.1| - 0.011 14.5 0.0 0.02 13.7 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Disaggr_repeat PF06848.6 gi|21229382|ref|NP_635304.1| - 2.4e-98 326.9 2.3 2.4e-98 326.9 1.6 1.9 2 0 0 2 2 2 1 Disaggregatase related repeat PKD PF00801.15 gi|21229382|ref|NP_635304.1| - 1.8e-13 50.0 10.4 2.8e-13 49.4 6.1 2.2 2 0 0 2 2 2 1 PKD domain DUF4091 PF13320.1 gi|21229382|ref|NP_635304.1| - 5.6e-07 29.3 0.9 2.3e-06 27.4 0.2 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4091) TGFb_propeptide PF00688.13 gi|21229382|ref|NP_635304.1| - 0.014 14.7 0.0 1.2 8.3 0.0 2.2 2 0 0 2 2 2 0 TGF-beta propeptide Met_10 PF02475.11 gi|21229383|ref|NP_635305.1| - 2.2e-54 184.1 0.0 3e-54 183.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|21229383|ref|NP_635305.1| - 3.7e-07 30.1 0.0 6.7e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|21229383|ref|NP_635305.1| - 5.3e-06 26.9 0.0 9e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|21229383|ref|NP_635305.1| - 4.4e-05 23.1 0.0 0.00024 20.7 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|21229383|ref|NP_635305.1| - 5.9e-05 22.6 0.0 8.4e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.10 gi|21229383|ref|NP_635305.1| - 0.0051 16.2 0.0 0.007 15.7 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 TRM PF02005.11 gi|21229383|ref|NP_635305.1| - 0.008 15.1 0.0 0.021 13.7 0.0 1.6 2 0 0 2 2 2 1 N2,N2-dimethylguanosine tRNA methyltransferase PhnI PF05861.7 gi|21229383|ref|NP_635305.1| - 0.02 13.4 0.0 0.031 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) PRMT5 PF05185.11 gi|21229383|ref|NP_635305.1| - 0.02 13.8 0.0 0.041 12.7 0.0 1.4 2 0 0 2 2 2 0 PRMT5 arginine-N-methyltransferase Methyltransf_3 PF01596.12 gi|21229383|ref|NP_635305.1| - 0.1 11.6 0.0 0.23 10.4 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_21 PF05050.7 gi|21229383|ref|NP_635305.1| - 0.15 12.0 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase FkbM domain Helicase_C_2 PF13307.1 gi|21229384|ref|NP_635306.1| - 1e-22 80.8 0.0 1.7e-22 80.1 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.10 gi|21229384|ref|NP_635306.1| - 1.5e-07 31.4 0.1 8.4e-07 28.9 0.0 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.10 gi|21229384|ref|NP_635306.1| - 0.0012 18.3 0.0 0.0026 17.2 0.0 1.6 1 0 0 1 1 1 1 DEAD_2 MeMO_Hyd_G PF02964.11 gi|21229384|ref|NP_635306.1| - 0.017 15.0 0.9 0.12 12.2 0.1 2.3 1 1 1 2 2 2 0 Methane monooxygenase, hydrolase gamma chain DEAD PF00270.24 gi|21229384|ref|NP_635306.1| - 0.031 13.7 0.3 0.17 11.3 0.1 2.3 2 1 0 2 2 2 0 DEAD/DEAH box helicase Pyrophosphatase PF00719.14 gi|21229385|ref|NP_635307.1| - 7.9e-09 35.1 0.0 1.1e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Radical_SAM PF04055.16 gi|21229386|ref|NP_635308.1| - 1e-17 64.8 0.5 1.6e-17 64.2 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.1 gi|21229386|ref|NP_635308.1| - 8.1e-07 29.2 0.6 8.1e-07 29.2 0.4 1.9 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.1 gi|21229386|ref|NP_635308.1| - 6.2e-06 26.2 0.0 1.2e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|21229386|ref|NP_635308.1| - 6.1e-05 23.1 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Metallophos_2 PF12850.2 gi|21229387|ref|NP_635309.1| - 4e-09 36.5 0.1 6.3e-09 35.8 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|21229387|ref|NP_635309.1| - 7e-09 35.3 2.6 4.2e-08 32.8 1.8 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase CoA_binding_2 PF13380.1 gi|21229387|ref|NP_635309.1| - 0.0011 19.1 0.0 0.017 15.2 0.0 2.4 2 1 1 3 3 3 1 CoA binding domain DUF3508 PF12018.3 gi|21229388|ref|NP_635310.1| - 0.019 13.9 0.1 0.024 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3508) CBM_X2 PF03442.9 gi|21229389|ref|NP_635311.1| - 0.0013 18.4 0.3 0.0033 17.1 0.1 1.7 2 0 0 2 2 2 1 Carbohydrate binding domain X2 Big_3 PF07523.7 gi|21229389|ref|NP_635311.1| - 0.14 12.2 3.6 0.3 11.1 0.1 2.5 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Flavin_Reduct PF01613.13 gi|21229390|ref|NP_635312.1| - 5e-21 75.1 0.0 6.5e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.7 gi|21229390|ref|NP_635312.1| - 0.074 12.6 0.0 0.11 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF447) UvrB PF12344.3 gi|21229391|ref|NP_635313.1| - 6.6e-22 76.7 1.1 6.6e-22 76.7 0.8 2.0 2 0 0 2 2 1 1 Ultra-violet resistance protein B Helicase_C PF00271.26 gi|21229391|ref|NP_635313.1| - 1.5e-15 56.8 0.0 3.2e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|21229391|ref|NP_635313.1| - 7.3e-14 52.0 0.3 1.2e-12 48.0 0.0 2.6 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit UVR PF02151.14 gi|21229391|ref|NP_635313.1| - 2.1e-08 33.3 2.9 2.1e-08 33.3 2.0 2.5 2 0 0 2 2 2 1 UvrB/uvrC motif DEAD PF00270.24 gi|21229391|ref|NP_635313.1| - 1.8e-06 27.5 0.0 0.00026 20.5 0.0 3.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_19 PF13245.1 gi|21229391|ref|NP_635313.1| - 0.00031 20.4 0.0 0.0042 16.7 0.0 2.5 2 0 0 2 2 2 1 Part of AAA domain AAA_30 PF13604.1 gi|21229391|ref|NP_635313.1| - 0.0036 16.9 0.1 0.21 11.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain Zot PF05707.7 gi|21229391|ref|NP_635313.1| - 0.022 14.2 0.0 1.8 8.0 0.0 2.5 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_22 PF13401.1 gi|21229391|ref|NP_635313.1| - 0.023 14.8 0.2 3.1 7.9 0.0 3.6 3 1 1 4 4 4 0 AAA domain Kinesin PF00225.18 gi|21229391|ref|NP_635313.1| - 0.034 12.8 0.0 0.056 12.1 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain Arch_ATPase PF01637.13 gi|21229391|ref|NP_635313.1| - 0.035 13.8 2.0 0.26 10.9 0.0 2.9 3 0 0 3 3 3 0 Archaeal ATPase Flavi_DEAD PF07652.9 gi|21229391|ref|NP_635313.1| - 0.057 13.1 0.6 0.28 10.9 0.1 2.4 3 0 0 3 3 3 0 Flavivirus DEAD domain Ribonuc_red_lgN PF00317.16 gi|21229391|ref|NP_635313.1| - 0.059 13.1 0.4 0.33 10.7 0.0 2.4 3 0 0 3 3 3 0 Ribonucleotide reductase, all-alpha domain AAA_16 PF13191.1 gi|21229391|ref|NP_635313.1| - 0.059 13.3 0.0 0.72 9.8 0.0 2.5 2 0 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.12 gi|21229391|ref|NP_635313.1| - 0.09 12.5 2.5 0.1 12.3 0.1 2.3 3 0 0 3 3 3 0 Domain of unknown function DUF87 AAA PF00004.24 gi|21229391|ref|NP_635313.1| - 0.12 12.5 1.8 3.1 8.0 0.0 3.2 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) UvrC_HhH_N PF08459.6 gi|21229392|ref|NP_635314.1| - 1.6e-56 190.1 0.2 3.4e-56 189.0 0.0 1.7 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 gi|21229392|ref|NP_635314.1| - 6.6e-10 39.2 1.0 3.1e-09 37.0 0.0 2.7 4 0 0 4 4 4 1 GIY-YIG catalytic domain UVR PF02151.14 gi|21229392|ref|NP_635314.1| - 9.3e-08 31.3 7.8 2.5e-07 29.9 5.4 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif ABC_tran PF00005.22 gi|21229393|ref|NP_635315.1| - 9.8e-21 74.4 1.5 1.6e-08 34.9 0.0 4.5 4 1 0 4 4 3 3 ABC transporter SMC_N PF02463.14 gi|21229393|ref|NP_635315.1| - 2.2e-11 43.3 0.0 0.00057 19.1 0.0 3.9 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|21229393|ref|NP_635315.1| - 1.2e-08 34.3 0.4 0.0073 15.8 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.1 gi|21229393|ref|NP_635315.1| - 1.4e-08 35.1 7.9 0.048 13.6 0.0 4.8 6 0 0 6 6 4 2 AAA domain AAA_16 PF13191.1 gi|21229393|ref|NP_635315.1| - 9.7e-08 32.2 0.1 0.013 15.5 0.0 3.4 3 0 0 3 3 3 2 AAA ATPase domain AAA_14 PF13173.1 gi|21229393|ref|NP_635315.1| - 6.7e-07 29.2 0.1 0.11 12.3 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_25 PF13481.1 gi|21229393|ref|NP_635315.1| - 2.6e-06 27.0 0.0 0.093 12.1 0.0 3.0 2 0 0 2 2 2 2 AAA domain DnaJ_CXXCXGXG PF00684.14 gi|21229393|ref|NP_635315.1| - 8.5e-06 25.7 6.1 0.009 16.0 0.3 3.8 3 0 0 3 3 3 1 DnaJ central domain AAA_22 PF13401.1 gi|21229393|ref|NP_635315.1| - 9.2e-06 25.8 2.3 0.38 10.8 0.0 4.2 4 0 0 4 4 4 2 AAA domain AAA_18 PF13238.1 gi|21229393|ref|NP_635315.1| - 1.9e-05 24.9 0.3 0.084 13.1 0.1 3.2 2 0 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|21229393|ref|NP_635315.1| - 2e-05 23.8 0.1 0.17 11.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function, DUF258 Viral_helicase1 PF01443.13 gi|21229393|ref|NP_635315.1| - 3.6e-05 23.4 0.1 0.073 12.5 0.0 2.7 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.1 gi|21229393|ref|NP_635315.1| - 5.6e-05 23.0 0.0 0.47 10.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|21229393|ref|NP_635315.1| - 7.6e-05 22.3 1.5 0.45 10.2 0.0 3.3 3 0 0 3 3 2 2 Part of AAA domain AAA_15 PF13175.1 gi|21229393|ref|NP_635315.1| - 8.8e-05 21.7 0.2 0.39 9.6 0.0 4.1 4 0 0 4 4 4 1 AAA ATPase domain AAA_23 PF13476.1 gi|21229393|ref|NP_635315.1| - 0.00013 22.3 2.1 0.013 15.8 0.2 3.4 4 0 0 4 4 3 2 AAA domain DUF2075 PF09848.4 gi|21229393|ref|NP_635315.1| - 0.00022 20.2 0.1 0.28 10.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) cobW PF02492.14 gi|21229393|ref|NP_635315.1| - 0.00027 20.4 0.3 0.08 12.3 0.1 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain KaiC PF06745.8 gi|21229393|ref|NP_635315.1| - 0.00029 20.0 2.6 0.15 11.1 0.0 3.6 4 0 0 4 4 3 1 KaiC Arch_ATPase PF01637.13 gi|21229393|ref|NP_635315.1| - 0.00048 19.8 0.9 1.1 8.8 0.0 3.2 3 0 0 3 3 3 2 Archaeal ATPase AAA_10 PF12846.2 gi|21229393|ref|NP_635315.1| - 0.0005 19.6 0.1 1.2 8.4 0.0 3.0 2 1 0 2 2 2 2 AAA-like domain T2SE PF00437.15 gi|21229393|ref|NP_635315.1| - 0.00052 18.9 0.2 0.84 8.4 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein APS_kinase PF01583.15 gi|21229393|ref|NP_635315.1| - 0.00094 18.8 0.2 0.99 9.0 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase PRK PF00485.13 gi|21229393|ref|NP_635315.1| - 0.0017 17.9 0.2 0.99 8.9 0.0 2.8 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family NACHT PF05729.7 gi|21229393|ref|NP_635315.1| - 0.0018 17.9 0.2 1.1 8.8 0.0 2.4 2 0 0 2 2 2 1 NACHT domain RNA_helicase PF00910.17 gi|21229393|ref|NP_635315.1| - 0.0021 18.2 0.2 0.61 10.2 0.0 2.9 3 0 0 3 3 2 1 RNA helicase BCA_ABC_TP_C PF12399.3 gi|21229393|ref|NP_635315.1| - 0.0022 17.6 5.3 0.22 11.2 0.1 2.7 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter MMR_HSR1 PF01926.18 gi|21229393|ref|NP_635315.1| - 0.0057 16.6 0.7 1 9.3 0.1 3.5 4 0 0 4 4 3 1 50S ribosome-binding GTPase Miro PF08477.8 gi|21229393|ref|NP_635315.1| - 0.0066 16.9 0.5 5 7.6 0.0 3.9 4 0 0 4 4 3 0 Miro-like protein MobB PF03205.9 gi|21229393|ref|NP_635315.1| - 0.0083 15.8 1.7 2.1 8.0 0.5 2.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ArgK PF03308.11 gi|21229393|ref|NP_635315.1| - 0.0089 14.8 0.2 4.3 6.0 0.0 2.6 2 0 0 2 2 2 0 ArgK protein AAA_28 PF13521.1 gi|21229393|ref|NP_635315.1| - 0.022 14.7 0.1 4.9 7.0 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|21229393|ref|NP_635315.1| - 0.023 14.3 0.1 6.4 6.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain DAP3 PF10236.4 gi|21229393|ref|NP_635315.1| - 0.025 13.5 0.1 2.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 NTPase_1 PF03266.10 gi|21229393|ref|NP_635315.1| - 0.056 13.1 3.0 7.5 6.2 0.0 3.0 3 0 0 3 3 2 0 NTPase KTI12 PF08433.5 gi|21229393|ref|NP_635315.1| - 0.062 12.4 0.0 9.3 5.3 0.0 2.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Lar_restr_allev PF14354.1 gi|21229393|ref|NP_635315.1| - 0.087 13.1 7.4 4.6 7.6 0.1 3.5 3 0 0 3 3 3 0 Restriction alleviation protein Lar AAA_17 PF13207.1 gi|21229393|ref|NP_635315.1| - 0.16 12.7 18.4 0.077 13.8 0.8 4.6 5 0 0 5 5 3 0 AAA domain Zn-ribbon_8 PF09723.5 gi|21229393|ref|NP_635315.1| - 2 8.4 10.7 2.6 8.0 0.4 3.7 3 0 0 3 3 3 0 Zinc ribbon domain DrsE PF02635.10 gi|21229394|ref|NP_635316.1| - 1.4e-11 44.5 0.0 1.6e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family Fer4 PF00037.22 gi|21229395|ref|NP_635317.1| - 3.4e-08 32.7 9.2 9.1e-06 25.0 0.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229395|ref|NP_635317.1| - 3e-07 31.0 10.0 9.9e-07 29.4 7.0 1.9 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|21229395|ref|NP_635317.1| - 1.3e-06 28.1 9.4 3.5e-06 26.7 6.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21229395|ref|NP_635317.1| - 1.3e-06 27.9 7.4 0.00099 18.8 1.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21229395|ref|NP_635317.1| - 1.8e-06 27.8 2.0 0.0036 17.2 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21229395|ref|NP_635317.1| - 3.8e-06 27.1 7.9 7.7e-06 26.1 5.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229395|ref|NP_635317.1| - 1.4e-05 25.2 20.3 0.00087 19.5 7.3 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229395|ref|NP_635317.1| - 0.0002 21.7 4.8 0.022 15.1 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21229395|ref|NP_635317.1| - 0.00031 21.0 13.2 0.012 16.1 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|21229395|ref|NP_635317.1| - 0.00055 19.7 9.6 0.026 14.4 1.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|21229395|ref|NP_635317.1| - 0.00065 19.8 9.2 0.0094 16.2 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21229395|ref|NP_635317.1| - 0.0014 18.8 8.2 0.27 11.5 4.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Dehalogenase PF13486.1 gi|21229395|ref|NP_635317.1| - 0.014 14.8 0.0 0.022 14.2 0.0 1.3 1 0 0 1 1 1 0 Reductive dehalogenase subunit Fer4_21 PF14697.1 gi|21229395|ref|NP_635317.1| - 0.042 13.7 10.6 0.14 12.0 7.3 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21229395|ref|NP_635317.1| - 0.38 11.1 5.7 6.8 7.1 1.6 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Mrr_cat PF04471.7 gi|21229396|ref|NP_635318.1| - 5.6e-31 106.7 0.0 7.2e-31 106.3 0.0 1.1 1 0 0 1 1 1 1 Restriction endonuclease PAS_3 PF08447.6 gi|21229397|ref|NP_635319.1| - 2.4e-39 133.3 0.2 7.9e-19 67.5 0.3 3.6 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.7 gi|21229397|ref|NP_635319.1| - 4.3e-32 109.7 2.8 4.3e-32 109.7 2.0 2.0 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.1 gi|21229397|ref|NP_635319.1| - 8.4e-31 106.4 0.0 4.2e-11 43.1 0.0 4.0 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|21229397|ref|NP_635319.1| - 5.6e-22 77.6 0.0 3.3e-06 26.8 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|21229397|ref|NP_635319.1| - 3.5e-17 62.4 0.0 4.8e-09 36.2 0.0 4.6 4 1 0 4 4 4 2 PAS fold GAF_3 PF13492.1 gi|21229397|ref|NP_635319.1| - 1.4e-10 41.3 0.0 4.6e-10 39.6 0.0 1.9 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.1 gi|21229397|ref|NP_635319.1| - 3.6e-07 30.7 0.0 7.5e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.1 gi|21229397|ref|NP_635319.1| - 9.2e-06 25.5 0.0 0.043 13.7 0.0 3.1 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.21 gi|21229397|ref|NP_635319.1| - 5.8e-05 22.7 0.0 0.0002 21.0 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|21229397|ref|NP_635319.1| - 9.5e-05 22.7 0.5 0.00019 21.8 0.3 1.5 1 0 0 1 1 1 1 HWE histidine kinase GAF PF01590.21 gi|21229397|ref|NP_635319.1| - 0.00031 20.8 0.0 0.00084 19.4 0.0 1.8 1 1 0 1 1 1 1 GAF domain PAS_10 PF13596.1 gi|21229397|ref|NP_635319.1| - 0.13 12.5 0.0 1 9.6 0.0 2.6 2 0 0 2 2 2 0 PAS domain ELFV_dehydrog PF00208.16 gi|21229399|ref|NP_635321.1| - 2.3e-71 240.2 1.2 2.6e-71 240.0 0.8 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh_C PF02826.14 gi|21229399|ref|NP_635321.1| - 6.6e-05 22.1 0.0 0.00012 21.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|21229399|ref|NP_635321.1| - 0.0074 15.8 0.0 0.016 14.7 0.0 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Ldh_1_N PF00056.18 gi|21229399|ref|NP_635321.1| - 0.092 12.5 0.1 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|21229399|ref|NP_635321.1| - 0.094 12.9 0.0 0.2 11.9 0.0 1.6 2 0 0 2 2 2 0 Putative NAD(P)-binding ELFV_dehydrog_N PF02812.13 gi|21229400|ref|NP_635322.1| - 3.4e-53 178.7 0.0 4.3e-53 178.3 0.0 1.1 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FAD_binding_3 PF01494.14 gi|21229401|ref|NP_635323.1| - 5.3e-14 52.0 5.5 1.4e-08 34.2 1.5 3.6 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.2 gi|21229401|ref|NP_635323.1| - 6.6e-10 38.6 0.6 9.8e-10 38.0 0.4 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.19 gi|21229401|ref|NP_635323.1| - 2.3e-09 36.6 1.4 4.7e-06 25.7 0.5 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.12 gi|21229401|ref|NP_635323.1| - 1.3e-08 34.2 0.1 2.5e-08 33.2 0.0 1.5 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.9 gi|21229401|ref|NP_635323.1| - 2.7e-06 27.4 0.8 2.7e-06 27.4 0.6 1.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21229401|ref|NP_635323.1| - 3.7e-06 26.1 0.1 0.0016 17.3 0.0 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein HI0933_like PF03486.9 gi|21229401|ref|NP_635323.1| - 6.5e-06 24.8 0.3 1.1e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|21229401|ref|NP_635323.1| - 1.1e-05 25.3 0.2 2.8e-05 24.0 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|21229401|ref|NP_635323.1| - 0.00019 20.4 0.7 0.00031 19.7 0.5 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.9 gi|21229401|ref|NP_635323.1| - 0.00095 17.9 0.6 0.2 10.2 0.4 2.9 1 1 0 2 2 2 1 Tryptophan halogenase FAD_binding_2 PF00890.19 gi|21229401|ref|NP_635323.1| - 0.0032 16.3 1.2 0.0055 15.6 0.8 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|21229401|ref|NP_635323.1| - 0.012 15.6 0.4 0.023 14.7 0.3 1.6 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.13 gi|21229401|ref|NP_635323.1| - 0.052 13.1 0.2 0.1 12.2 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.16 gi|21229401|ref|NP_635323.1| - 0.11 12.3 0.1 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 ThiF family Pyr_redox PF00070.22 gi|21229401|ref|NP_635323.1| - 0.11 12.9 1.2 0.49 10.8 0.2 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PAPS_reduct PF01507.14 gi|21229402|ref|NP_635324.1| - 2.8e-39 134.7 0.0 4.9e-39 133.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Fer4 PF00037.22 gi|21229402|ref|NP_635324.1| - 7.3e-08 31.6 21.3 3.3e-07 29.6 1.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21229402|ref|NP_635324.1| - 1.9e-07 30.7 10.3 1.9e-07 30.7 7.2 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229402|ref|NP_635324.1| - 1.8e-06 28.0 10.8 1.8e-06 28.0 7.5 2.6 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|21229402|ref|NP_635324.1| - 1e-05 25.8 12.8 1e-05 25.8 8.9 2.5 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|21229402|ref|NP_635324.1| - 1.1e-05 25.3 3.7 0.00071 19.5 0.1 3.2 4 0 0 4 4 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|21229402|ref|NP_635324.1| - 0.00013 22.3 12.4 0.0018 18.6 0.8 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21229402|ref|NP_635324.1| - 0.0002 21.1 0.5 0.0002 21.1 0.4 3.4 4 0 0 4 4 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229402|ref|NP_635324.1| - 0.00021 21.0 2.8 0.00021 21.0 1.9 3.6 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|21229402|ref|NP_635324.1| - 0.00031 20.4 3.3 0.00031 20.4 2.3 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain NAD_synthase PF02540.12 gi|21229402|ref|NP_635324.1| - 0.0015 17.4 0.0 0.0025 16.7 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Fer4_4 PF12800.2 gi|21229402|ref|NP_635324.1| - 0.016 15.5 3.1 0.016 15.5 2.2 3.5 4 0 0 4 4 2 0 4Fe-4S binding domain Asn_synthase PF00733.16 gi|21229402|ref|NP_635324.1| - 0.024 14.1 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Fer4_3 PF12798.2 gi|21229402|ref|NP_635324.1| - 0.027 15.0 7.3 0.027 15.0 5.1 3.8 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229402|ref|NP_635324.1| - 0.029 15.1 2.6 0.029 15.1 1.8 3.9 3 1 1 4 4 3 0 4Fe-4S double cluster binding domain ATP_bind_3 PF01171.15 gi|21229402|ref|NP_635324.1| - 0.082 12.4 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 PP-loop family Fer4_17 PF13534.1 gi|21229402|ref|NP_635324.1| - 0.38 11.1 21.1 0.046 14.0 1.5 3.4 3 1 0 4 4 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229402|ref|NP_635324.1| - 0.7 10.5 7.4 1.4 9.5 0.5 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF2714 PF10896.3 gi|21229404|ref|NP_635326.1| - 0.14 12.0 0.6 0.16 11.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2714) UPF0118 PF01594.11 gi|21229405|ref|NP_635327.1| - 6.7e-42 143.6 41.7 8e-42 143.3 28.9 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 PetG PF02529.10 gi|21229405|ref|NP_635327.1| - 0.033 13.7 1.1 4.7 6.8 0.1 3.0 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 Rad33 PF08730.5 gi|21229405|ref|NP_635327.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 Rad33 tRNA-Thr_ED PF08915.6 gi|21229406|ref|NP_635328.1| - 6.5e-56 188.1 0.5 1.2e-55 187.2 0.3 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|21229406|ref|NP_635328.1| - 6.7e-24 84.3 1.2 1.3e-23 83.4 0.9 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|21229406|ref|NP_635328.1| - 4.7e-18 64.9 1.5 4.7e-18 64.9 1.1 2.0 2 0 0 2 2 2 1 Anticodon binding domain Heme_oxygenase PF01126.15 gi|21229406|ref|NP_635328.1| - 0.019 14.5 0.1 0.044 13.3 0.1 1.6 1 0 0 1 1 1 0 Heme oxygenase ResIII PF04851.10 gi|21229407|ref|NP_635329.1| - 8.6e-17 61.5 0.1 1.6e-16 60.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|21229407|ref|NP_635329.1| - 6.5e-08 32.3 0.0 2e-07 30.7 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|21229407|ref|NP_635329.1| - 1.4e-05 24.6 0.0 8.5e-05 22.1 0.0 2.1 2 1 1 3 3 3 1 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|21229407|ref|NP_635329.1| - 2.1e-05 24.6 0.0 5.8e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|21229407|ref|NP_635329.1| - 0.0044 16.7 0.8 0.013 15.1 0.6 1.8 1 0 0 1 1 1 1 Archaeal ATPase AAA PF00004.24 gi|21229407|ref|NP_635329.1| - 0.051 13.7 0.4 0.39 10.9 0.2 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.12 gi|21229407|ref|NP_635329.1| - 0.086 12.2 0.0 0.38 10.1 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_10 PF12846.2 gi|21229407|ref|NP_635329.1| - 0.11 11.9 0.5 17 4.7 0.0 2.7 3 0 0 3 3 3 0 AAA-like domain Abi PF02517.11 gi|21229408|ref|NP_635330.1| - 0.0017 18.4 13.5 0.0017 18.4 9.4 2.5 2 1 0 2 2 2 1 CAAX protease self-immunity Zn_protease PF05618.6 gi|21229409|ref|NP_635331.1| - 7e-21 74.3 0.1 2e-20 72.9 0.0 1.6 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.16 gi|21229409|ref|NP_635331.1| - 0.0037 16.6 0.1 0.1 11.9 0.1 2.1 1 1 0 1 1 1 1 Polypeptide deformylase Abhydrolase_5 PF12695.2 gi|21229410|ref|NP_635332.1| - 5.6e-15 55.3 0.0 7.2e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|21229410|ref|NP_635332.1| - 2.2e-13 50.6 0.0 3.7e-13 49.8 0.0 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|21229410|ref|NP_635332.1| - 0.017 14.6 0.0 0.8 9.2 0.0 2.1 2 0 0 2 2 2 0 alpha/beta hydrolase fold FSH1 PF03959.8 gi|21229410|ref|NP_635332.1| - 0.036 13.4 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Ser_hydrolase PF06821.8 gi|21229410|ref|NP_635332.1| - 0.11 12.0 0.0 1.4 8.4 0.0 2.1 1 1 0 1 1 1 0 Serine hydrolase Nitroreductase PF00881.19 gi|21229411|ref|NP_635333.1| - 3.6e-27 95.2 0.0 5.1e-27 94.7 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.22 gi|21229411|ref|NP_635333.1| - 1.5e-11 43.3 12.3 2e-07 30.3 2.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21229411|ref|NP_635333.1| - 4e-10 39.9 9.7 8.3e-10 38.8 6.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|21229411|ref|NP_635333.1| - 5.9e-09 36.0 7.8 1.1e-08 35.1 5.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21229411|ref|NP_635333.1| - 6.9e-08 32.0 12.4 5.7e-06 25.9 2.3 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|21229411|ref|NP_635333.1| - 8.7e-08 31.8 11.0 1.2e-07 31.4 6.9 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|21229411|ref|NP_635333.1| - 9.6e-07 29.4 7.3 0.0021 18.7 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|21229411|ref|NP_635333.1| - 2.5e-06 27.0 14.7 2.8e-05 23.7 2.0 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|21229411|ref|NP_635333.1| - 0.00013 21.8 12.7 0.00013 21.8 8.8 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|21229411|ref|NP_635333.1| - 0.00018 21.7 12.9 0.016 15.5 8.4 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21229411|ref|NP_635333.1| - 0.00038 20.2 11.0 0.00085 19.1 7.6 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21229411|ref|NP_635333.1| - 0.0011 19.1 14.4 0.011 16.0 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|21229411|ref|NP_635333.1| - 0.002 18.5 11.0 0.11 12.9 2.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|21229411|ref|NP_635333.1| - 0.0082 16.6 1.8 0.0082 16.6 1.2 2.4 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|21229411|ref|NP_635333.1| - 0.0082 16.5 11.0 0.017 15.4 1.3 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|21229411|ref|NP_635333.1| - 0.06 13.9 5.2 0.06 13.9 3.6 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain DUF4066 PF13278.1 gi|21229412|ref|NP_635334.1| - 5.8e-40 136.2 0.0 6.7e-40 136.0 0.0 1.0 1 0 0 1 1 1 1 Putative amidotransferase DJ-1_PfpI PF01965.19 gi|21229412|ref|NP_635334.1| - 1.6e-20 73.0 0.0 2.2e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF3248 PF11609.3 gi|21229412|ref|NP_635334.1| - 0.069 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3248) FERM_C PF09380.5 gi|21229412|ref|NP_635334.1| - 0.077 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 FERM C-terminal PH-like domain UL40 PF10682.4 gi|21229412|ref|NP_635334.1| - 0.12 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Acetyltransf_9 PF13527.1 gi|21229413|ref|NP_635335.1| - 6.2e-13 48.7 0.0 8.7e-13 48.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|21229413|ref|NP_635335.1| - 3.9e-10 39.6 0.0 7.1e-10 38.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|21229413|ref|NP_635335.1| - 5.3e-07 29.7 0.1 9.2e-07 28.9 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|21229413|ref|NP_635335.1| - 0.00014 21.9 0.0 0.0002 21.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.1 gi|21229413|ref|NP_635335.1| - 0.015 15.2 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MOZ_SAS PF01853.13 gi|21229413|ref|NP_635335.1| - 0.022 14.0 0.0 0.036 13.2 0.0 1.4 1 0 0 1 1 1 0 MOZ/SAS family HNH PF01844.18 gi|21229414|ref|NP_635336.1| - 1e-13 50.9 1.5 1e-13 50.9 1.1 1.7 2 0 0 2 2 2 1 HNH endonuclease ZF-HD_dimer PF04770.7 gi|21229414|ref|NP_635336.1| - 0.12 12.4 5.5 0.6 10.2 3.8 1.9 1 1 0 1 1 1 0 ZF-HD protein dimerisation region 7TMR-DISM_7TM PF07695.6 gi|21229415|ref|NP_635337.1| - 0.0083 15.8 10.7 0.0097 15.5 7.4 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling AzlD PF05437.7 gi|21229415|ref|NP_635337.1| - 0.018 14.9 6.0 0.035 14.0 4.1 1.5 1 0 0 1 1 1 0 Branched-chain amino acid transport protein (AzlD) DUF1614 PF07758.6 gi|21229415|ref|NP_635337.1| - 0.08 12.6 4.3 0.096 12.4 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) DUF4191 PF13829.1 gi|21229415|ref|NP_635337.1| - 0.45 9.5 5.8 0.43 9.6 3.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) YtpI PF14007.1 gi|21229415|ref|NP_635337.1| - 0.59 10.0 5.1 0.38 10.7 1.9 2.0 1 1 0 1 1 1 0 YtpI-like protein Arteri_Gl PF00951.13 gi|21229415|ref|NP_635337.1| - 2.2 7.8 5.9 3.2 7.2 3.9 1.4 1 1 1 2 2 2 0 Arterivirus GL envelope glycoprotein DUF1129 PF06570.6 gi|21229415|ref|NP_635337.1| - 5.6 6.2 9.9 1.4 8.1 4.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) VIT1 PF01988.14 gi|21229415|ref|NP_635337.1| - 7.4 5.9 9.8 11 5.4 6.8 1.2 1 0 0 1 1 1 0 VIT family PRAI PF00697.17 gi|21229416|ref|NP_635338.1| - 6e-32 110.8 0.0 7.2e-32 110.5 0.0 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.12 gi|21229416|ref|NP_635338.1| - 0.061 12.4 0.1 0.28 10.2 0.0 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase/TENI DUF3661 PF12400.3 gi|21229418|ref|NP_635340.1| - 0.07 13.2 0.4 0.092 12.8 0.2 1.1 1 0 0 1 1 1 0 Vaculolar membrane protein NUDIX PF00293.23 gi|21229419|ref|NP_635341.1| - 3.1e-13 49.5 0.0 4.4e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain NosD PF05048.8 gi|21229420|ref|NP_635342.1| - 7.6e-125 414.7 129.7 1.1e-54 185.0 11.6 6.3 1 1 5 6 6 6 6 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.1 gi|21229420|ref|NP_635342.1| - 7.2e-77 256.5 181.1 2.4e-20 72.8 21.4 8.7 2 1 6 8 8 8 7 Right handed beta helix region MFS_1 PF07690.11 gi|21229421|ref|NP_635343.1| - 1.4e-22 79.8 43.0 4.6e-21 74.9 26.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily BPD_transp_1 PF00528.17 gi|21229422|ref|NP_635344.1| - 1.7e-34 118.9 8.0 2.9e-34 118.2 3.7 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|21229422|ref|NP_635344.1| - 8.2e-08 31.5 0.0 3.2e-07 29.6 0.0 2.1 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C ABC2_membrane_4 PF12730.2 gi|21229422|ref|NP_635344.1| - 0.79 8.8 16.5 9.9 5.2 5.3 3.1 3 0 0 3 3 3 0 ABC-2 family transporter protein BPD_transp_1 PF00528.17 gi|21229423|ref|NP_635345.1| - 4.6e-49 166.4 10.3 4.6e-49 166.4 7.2 1.6 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.9 gi|21229423|ref|NP_635345.1| - 7 7.0 8.9 4.6 7.6 0.4 3.3 3 0 0 3 3 3 0 Renin receptor-like protein SBP_bac_5 PF00496.17 gi|21229424|ref|NP_635346.1| - 1.7e-84 283.7 3.9 2.3e-84 283.3 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.22 gi|21229425|ref|NP_635347.1| - 4.2e-32 111.3 0.0 9.9e-32 110.0 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|21229425|ref|NP_635347.1| - 1.6e-10 41.4 0.7 3.2e-06 27.3 0.1 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21229425|ref|NP_635347.1| - 7.8e-10 38.3 0.0 1.2e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.7 gi|21229425|ref|NP_635347.1| - 8.4e-08 32.4 2.6 8.5e-07 29.2 1.8 2.3 1 1 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.1 gi|21229425|ref|NP_635347.1| - 3.6e-05 23.9 0.1 0.00017 21.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|21229425|ref|NP_635347.1| - 5.9e-05 22.5 0.0 0.00013 21.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|21229425|ref|NP_635347.1| - 0.0008 19.4 0.1 0.0015 18.5 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|21229425|ref|NP_635347.1| - 0.011 14.7 0.4 0.16 10.9 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.20 gi|21229425|ref|NP_635347.1| - 0.059 12.8 0.0 0.06 12.8 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF258 PF03193.11 gi|21229425|ref|NP_635347.1| - 0.075 12.2 0.2 0.21 10.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|21229425|ref|NP_635347.1| - 0.11 11.9 1.7 0.58 9.5 0.0 2.4 3 0 0 3 3 3 0 AAA domain DUF87 PF01935.12 gi|21229425|ref|NP_635347.1| - 0.14 12.0 0.2 0.33 10.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function DUF87 T2SE PF00437.15 gi|21229425|ref|NP_635347.1| - 0.14 11.0 0.2 0.86 8.4 0.1 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein Sigma54_activat PF00158.21 gi|21229425|ref|NP_635347.1| - 0.14 11.5 0.1 0.96 8.8 0.0 2.3 2 1 1 3 3 3 0 Sigma-54 interaction domain KaiC PF06745.8 gi|21229425|ref|NP_635347.1| - 0.14 11.2 0.7 0.39 9.7 0.1 1.9 2 0 0 2 2 2 0 KaiC AAA_10 PF12846.2 gi|21229425|ref|NP_635347.1| - 0.15 11.5 0.3 0.47 9.8 0.1 1.7 1 1 1 2 2 2 0 AAA-like domain DUF3987 PF13148.1 gi|21229425|ref|NP_635347.1| - 0.16 10.4 0.0 0.27 9.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ABC_tran PF00005.22 gi|21229426|ref|NP_635348.1| - 9.6e-25 87.4 0.0 1.3e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|21229426|ref|NP_635348.1| - 2.5e-13 50.1 0.4 5e-13 49.1 0.3 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|21229426|ref|NP_635348.1| - 9.4e-09 35.6 0.1 2.1e-06 27.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|21229426|ref|NP_635348.1| - 0.00024 20.4 0.1 0.00058 19.1 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|21229426|ref|NP_635348.1| - 0.014 14.4 0.0 0.17 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.20 gi|21229426|ref|NP_635348.1| - 0.12 11.8 0.1 0.15 11.5 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain SDF PF00375.13 gi|21229427|ref|NP_635349.1| - 5e-115 384.3 42.3 5.6e-115 384.2 29.3 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family AFOR_C PF01314.13 gi|21229428|ref|NP_635350.1| - 9.8e-71 238.4 0.1 1.3e-70 238.0 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.10 gi|21229428|ref|NP_635350.1| - 2e-55 187.2 0.0 4.3e-55 186.1 0.0 1.5 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer4 PF00037.22 gi|21229429|ref|NP_635351.1| - 6e-13 47.7 33.7 0.00011 21.6 2.0 5.1 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.2 gi|21229429|ref|NP_635351.1| - 1.5e-12 47.6 25.4 9.7e-06 25.8 7.7 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|21229429|ref|NP_635351.1| - 1.9e-11 43.3 35.9 2.8e-05 23.7 1.7 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.1 gi|21229429|ref|NP_635351.1| - 1.1e-09 38.3 27.5 3.4e-05 24.0 8.9 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|21229429|ref|NP_635351.1| - 3.3e-09 36.4 26.0 0.00024 20.8 6.0 3.2 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|21229429|ref|NP_635351.1| - 4.5e-09 36.0 12.5 4.5e-09 36.0 8.7 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|21229429|ref|NP_635351.1| - 8e-09 35.1 28.2 0.0049 16.6 9.1 3.3 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|21229429|ref|NP_635351.1| - 1.1e-08 34.4 35.7 0.00039 20.1 1.8 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.1 gi|21229429|ref|NP_635351.1| - 7.8e-08 32.9 25.3 0.0026 18.4 0.5 4.5 2 2 3 5 5 5 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|21229429|ref|NP_635351.1| - 1.5e-06 28.1 25.0 0.01 15.8 4.9 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|21229429|ref|NP_635351.1| - 7.2e-06 25.9 32.8 0.0017 18.5 0.7 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.1 gi|21229429|ref|NP_635351.1| - 9.3e-05 22.6 27.9 0.091 13.1 0.4 3.9 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|21229429|ref|NP_635351.1| - 0.00046 20.5 47.9 0.017 15.6 4.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_15 PF13459.1 gi|21229429|ref|NP_635351.1| - 0.13 12.8 27.6 0.18 12.4 1.8 3.9 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|21229429|ref|NP_635351.1| - 2.2 8.7 36.3 0.47 10.9 2.3 4.2 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|21229429|ref|NP_635351.1| - 5.6 7.4 24.0 1.7 9.1 0.2 3.7 4 0 0 4 4 3 0 4Fe-4S single cluster domain GATase PF00117.23 gi|21229430|ref|NP_635352.1| - 6e-20 71.5 0.0 7.7e-20 71.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I HTS PF04204.11 gi|21229430|ref|NP_635352.1| - 8.8e-05 21.3 0.0 0.00012 20.9 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase GATase_3 PF07685.9 gi|21229430|ref|NP_635352.1| - 0.00016 21.3 0.0 0.00023 20.7 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|21229430|ref|NP_635352.1| - 0.0025 17.2 0.0 0.0063 15.9 0.0 1.8 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.19 gi|21229430|ref|NP_635352.1| - 0.016 14.7 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family DUF4066 PF13278.1 gi|21229430|ref|NP_635352.1| - 0.11 11.7 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative amidotransferase HAD_2 PF13419.1 gi|21229431|ref|NP_635353.1| - 1.8e-22 80.3 0.0 2.1e-22 80.1 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|21229431|ref|NP_635353.1| - 1.6e-09 38.4 0.1 1.7e-08 35.1 0.0 1.9 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|21229431|ref|NP_635353.1| - 9.3e-09 34.8 0.0 1.9e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.2 gi|21229431|ref|NP_635353.1| - 0.00016 21.8 0.1 0.00026 21.2 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase TPR_2 PF07719.12 gi|21229432|ref|NP_635354.1| - 1.3e-44 146.5 10.3 1.7e-09 36.8 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_1 PF00515.23 gi|21229432|ref|NP_635354.1| - 4.2e-42 140.0 12.6 3.3e-10 39.1 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21229432|ref|NP_635354.1| - 2.2e-39 132.9 11.0 7.3e-17 60.7 0.2 4.3 3 1 0 4 4 4 4 TPR repeat TPR_16 PF13432.1 gi|21229432|ref|NP_635354.1| - 3e-36 123.3 6.4 3.4e-12 46.6 0.0 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21229432|ref|NP_635354.1| - 6.6e-30 100.7 7.0 4e-07 29.7 0.0 7.0 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21229432|ref|NP_635354.1| - 2.2e-28 95.8 6.2 7e-07 28.5 0.1 6.6 5 1 1 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21229432|ref|NP_635354.1| - 3e-25 86.4 1.1 0.00012 22.3 0.1 6.2 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21229432|ref|NP_635354.1| - 7.9e-24 83.3 0.0 4e-05 23.3 0.0 5.2 4 1 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21229432|ref|NP_635354.1| - 1.9e-23 82.2 5.6 1.8e-11 43.7 0.1 5.2 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21229432|ref|NP_635354.1| - 2.3e-22 79.1 3.1 2.4e-08 34.1 0.0 4.2 3 1 1 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|21229432|ref|NP_635354.1| - 8.3e-20 70.7 3.1 5e-08 32.9 0.0 4.3 2 2 3 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|21229432|ref|NP_635354.1| - 1.9e-18 65.5 4.5 0.02 15.3 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21229432|ref|NP_635354.1| - 1.5e-13 50.3 5.7 0.014 15.2 0.0 6.1 6 0 0 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.3 gi|21229432|ref|NP_635354.1| - 1.1e-10 40.9 0.6 0.0014 17.4 0.0 3.9 2 1 0 4 4 4 3 NMDA receptor-regulated protein 1 TPR_7 PF13176.1 gi|21229432|ref|NP_635354.1| - 1.3e-10 40.2 5.5 0.12 12.2 0.0 6.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21229432|ref|NP_635354.1| - 9.4e-09 34.9 8.1 1.5 8.8 0.1 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat Apc5 PF12862.2 gi|21229432|ref|NP_635354.1| - 3.2e-07 30.0 1.1 0.2 11.5 0.0 4.8 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 5 DUF3856 PF12968.2 gi|21229432|ref|NP_635354.1| - 5.2e-07 29.5 2.8 0.92 9.3 0.0 5.7 3 2 3 6 6 6 2 Domain of Unknown Function (DUF3856) TPR_15 PF13429.1 gi|21229432|ref|NP_635354.1| - 5.6e-07 28.9 0.7 0.00017 20.7 0.0 3.9 1 1 2 4 4 4 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|21229432|ref|NP_635354.1| - 8.7e-07 28.6 6.9 0.15 11.8 0.0 5.6 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_20 PF14561.1 gi|21229432|ref|NP_635354.1| - 1.9e-06 27.9 0.5 0.13 12.3 0.0 4.3 3 1 2 5 5 5 3 Tetratricopeptide repeat DUF3829 PF12889.2 gi|21229432|ref|NP_635354.1| - 7.6e-06 25.3 1.6 1.5e-05 24.3 1.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) BTAD PF03704.12 gi|21229432|ref|NP_635354.1| - 2e-05 24.9 0.3 0.0094 16.2 0.0 3.4 2 2 1 3 3 3 2 Bacterial transcriptional activator domain Coatomer_E PF04733.9 gi|21229432|ref|NP_635354.1| - 4.8e-05 22.7 1.0 0.45 9.6 0.0 4.0 3 1 0 4 4 4 2 Coatomer epsilon subunit PPR PF01535.15 gi|21229432|ref|NP_635354.1| - 0.0002 21.1 2.7 3.8 7.7 0.0 5.2 5 0 0 5 5 5 1 PPR repeat TPR_5 PF12688.2 gi|21229432|ref|NP_635354.1| - 0.00026 21.0 0.1 1.6 8.8 0.0 3.5 2 2 1 3 3 3 1 Tetratrico peptide repeat SHNi-TPR PF10516.4 gi|21229432|ref|NP_635354.1| - 0.00047 19.3 1.5 0.76 9.0 0.0 4.0 4 0 0 4 4 4 1 SHNi-TPR TPR_4 PF07721.9 gi|21229432|ref|NP_635354.1| - 0.0008 19.6 0.0 29 5.4 0.0 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat ChAPs PF09295.5 gi|21229432|ref|NP_635354.1| - 0.0016 17.2 0.0 0.0029 16.4 0.0 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_21 PF09976.4 gi|21229432|ref|NP_635354.1| - 0.01 15.7 0.2 9.7 6.1 0.0 3.7 4 1 0 4 4 3 0 Tetratricopeptide repeat YfiO PF13525.1 gi|21229432|ref|NP_635354.1| - 0.014 14.9 0.1 4.6 6.6 0.0 2.9 2 1 0 2 2 2 0 Outer membrane lipoprotein Alkyl_sulf_dimr PF14863.1 gi|21229432|ref|NP_635354.1| - 0.1 12.8 0.2 23 5.1 0.0 3.1 3 0 0 3 3 3 0 Alkyl sulfatase dimerisation NAD_binding_8 PF13450.1 gi|21229433|ref|NP_635355.1| - 1.2e-18 66.9 0.1 2.3e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.19 gi|21229433|ref|NP_635355.1| - 6.6e-16 58.4 0.0 1.6e-14 53.9 0.0 2.2 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.19 gi|21229433|ref|NP_635355.1| - 1.6e-11 43.7 0.4 7.1e-10 38.2 0.5 2.5 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.19 gi|21229433|ref|NP_635355.1| - 2.2e-10 40.0 0.2 6.7e-08 31.8 0.3 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|21229433|ref|NP_635355.1| - 2.9e-09 36.5 0.1 5.7e-09 35.5 0.1 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|21229433|ref|NP_635355.1| - 4.1e-08 32.1 0.2 3.6e-07 29.0 0.1 2.3 3 0 0 3 3 3 1 HI0933-like protein Thi4 PF01946.12 gi|21229433|ref|NP_635355.1| - 8.3e-07 28.3 0.5 2.1e-06 26.9 0.2 1.7 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.14 gi|21229433|ref|NP_635355.1| - 2.4e-06 26.8 0.2 4e-06 26.1 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain GDI PF00996.13 gi|21229433|ref|NP_635355.1| - 8.3e-06 24.3 0.7 2.1e-05 23.0 0.3 1.8 2 0 0 2 2 2 1 GDP dissociation inhibitor Pyr_redox PF00070.22 gi|21229433|ref|NP_635355.1| - 0.00014 22.1 2.1 0.00015 22.1 0.2 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|21229433|ref|NP_635355.1| - 0.00017 20.5 0.5 0.00043 19.2 0.1 1.8 3 0 0 3 3 3 1 Glucose inhibited division protein A Pyr_redox_2 PF07992.9 gi|21229433|ref|NP_635355.1| - 0.00018 21.4 0.0 0.00038 20.3 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|21229433|ref|NP_635355.1| - 0.00066 19.7 0.3 0.0012 18.9 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.7 gi|21229433|ref|NP_635355.1| - 0.0037 16.2 0.2 0.0056 15.6 0.1 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Trp_halogenase PF04820.9 gi|21229433|ref|NP_635355.1| - 0.12 11.0 0.2 0.18 10.3 0.2 1.2 1 0 0 1 1 1 0 Tryptophan halogenase ApbA PF02558.11 gi|21229433|ref|NP_635355.1| - 0.2 11.1 0.6 0.4 10.1 0.4 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Rieske PF00355.21 gi|21229434|ref|NP_635356.1| - 5.6e-18 64.3 0.0 7e-18 64.0 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|21229434|ref|NP_635356.1| - 4e-10 39.3 0.0 4.9e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain B12-binding_2 PF02607.12 gi|21229436|ref|NP_635358.1| - 5.2e-20 71.2 0.0 1.2e-19 70.0 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain B12-binding PF02310.14 gi|21229436|ref|NP_635358.1| - 5.1e-17 61.8 0.2 8.2e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain Rep_fac_C PF08542.6 gi|21229436|ref|NP_635358.1| - 0.044 13.7 0.0 0.11 12.4 0.0 1.8 1 0 0 1 1 1 0 Replication factor C C-terminal domain RsbU_N PF08673.5 gi|21229436|ref|NP_635358.1| - 0.046 13.7 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain MtmB PF05369.7 gi|85666103|ref|NP_635359.2| - 0 1081.4 3.6 0 1081.3 2.5 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB DUF2769 PF10967.3 gi|21229439|ref|NP_635361.1| - 1.3e-19 70.2 9.1 1.7e-19 69.8 6.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) Cys_rich_CWC PF14375.1 gi|21229439|ref|NP_635361.1| - 0.02 14.7 4.8 0.74 9.7 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich CWC zf-Paramyx-P PF13008.2 gi|21229439|ref|NP_635361.1| - 0.048 12.8 5.9 1 8.5 0.6 2.3 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein DUF3317 PF11779.3 gi|21229441|ref|NP_635363.1| - 0.036 13.5 0.0 0.064 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3317) HupE_UreJ PF04955.7 gi|21229441|ref|NP_635363.1| - 0.16 11.2 1.5 0.29 10.3 1.0 1.5 1 1 0 1 1 1 0 HupE / UreJ protein TPR_1 PF00515.23 gi|21229444|ref|NP_635366.1| - 5.1e-48 158.7 14.6 6.1e-08 31.9 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.1 gi|21229444|ref|NP_635366.1| - 3.3e-47 158.0 15.4 1.2e-14 53.7 0.1 4.4 4 0 0 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|21229444|ref|NP_635366.1| - 1.5e-41 136.9 16.2 4.5e-07 29.2 0.2 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|21229444|ref|NP_635366.1| - 2.7e-39 130.1 11.5 4.3e-05 23.3 0.0 8.3 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_16 PF13432.1 gi|21229444|ref|NP_635366.1| - 3.9e-32 110.2 10.4 8.8e-11 42.1 0.6 5.2 3 2 2 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|21229444|ref|NP_635366.1| - 3.8e-29 100.4 13.4 7.2e-08 32.2 0.0 4.8 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.1 gi|21229444|ref|NP_635366.1| - 1.2e-27 93.8 14.3 2.4e-05 24.5 0.6 8.3 1 1 7 8 8 8 8 Tetratricopeptide repeat TPR_8 PF13181.1 gi|21229444|ref|NP_635366.1| - 3.7e-26 88.9 11.5 1.1e-06 27.9 0.1 8.2 7 1 1 8 8 8 6 Tetratricopeptide repeat TPR_9 PF13371.1 gi|21229444|ref|NP_635366.1| - 1.8e-20 72.5 7.9 2.8e-06 27.1 0.1 4.6 2 1 4 6 6 5 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|21229444|ref|NP_635366.1| - 8.7e-19 67.6 13.6 1e-05 25.7 0.1 5.3 2 2 3 6 6 6 5 Tetratricopeptide repeat Apc3 PF12895.2 gi|21229444|ref|NP_635366.1| - 8.3e-17 61.1 2.0 9.7e-06 25.6 0.4 3.4 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|21229444|ref|NP_635366.1| - 6.5e-13 47.4 4.6 0.001 18.6 0.1 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|21229444|ref|NP_635366.1| - 3.3e-09 36.4 9.3 0.7 9.8 0.0 6.2 6 1 1 7 7 6 4 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|21229444|ref|NP_635366.1| - 3.7e-08 33.3 6.6 6.9 7.3 0.0 7.8 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_15 PF13429.1 gi|21229444|ref|NP_635366.1| - 7.6e-08 31.7 10.5 2.4e-05 23.5 1.7 3.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|21229444|ref|NP_635366.1| - 2.6e-07 30.3 6.6 0.15 12.0 0.3 5.4 5 1 1 6 6 5 2 Tetratricopeptide repeat BTAD PF03704.12 gi|21229444|ref|NP_635366.1| - 2.6e-06 27.7 2.4 0.15 12.3 0.3 3.6 1 1 2 3 3 3 2 Bacterial transcriptional activator domain TPR_20 PF14561.1 gi|21229444|ref|NP_635366.1| - 8.8e-06 25.7 6.0 0.94 9.6 0.4 5.0 2 2 3 5 5 5 2 Tetratricopeptide repeat Rapsyn_N PF10579.4 gi|21229444|ref|NP_635366.1| - 0.00075 19.2 0.1 0.22 11.3 0.0 3.6 3 1 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region MIT PF04212.13 gi|21229444|ref|NP_635366.1| - 0.0051 16.6 1.7 3.8 7.4 0.2 4.6 4 0 0 4 4 4 1 MIT (microtubule interacting and transport) domain Apc5 PF12862.2 gi|21229444|ref|NP_635366.1| - 0.0084 15.9 0.4 15 5.5 0.0 3.7 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 DUF3856 PF12968.2 gi|21229444|ref|NP_635366.1| - 0.0094 15.7 13.2 0.82 9.4 0.4 6.1 2 1 1 4 4 3 1 Domain of Unknown Function (DUF3856) Coatomer_E PF04733.9 gi|21229444|ref|NP_635366.1| - 0.039 13.1 0.1 2.9 7.0 0.0 2.6 2 1 0 2 2 2 0 Coatomer epsilon subunit FAT PF02259.18 gi|21229444|ref|NP_635366.1| - 0.046 12.7 1.7 0.25 10.2 0.6 2.6 2 1 0 2 2 2 0 FAT domain NARP1 PF12569.3 gi|21229444|ref|NP_635366.1| - 0.17 10.6 27.8 0.45 9.2 0.1 5.3 1 1 6 7 7 6 0 NMDA receptor-regulated protein 1 TPR_4 PF07721.9 gi|21229444|ref|NP_635366.1| - 0.21 12.0 1.4 38 5.1 0.4 4.2 5 0 0 5 5 3 0 Tetratricopeptide repeat HTH_29 PF13551.1 gi|21229445|ref|NP_635367.1| - 2.7e-25 88.6 0.1 1.1e-24 86.7 0.0 1.8 1 1 1 2 2 2 1 Winged helix-turn helix HTH_32 PF13565.1 gi|21229445|ref|NP_635367.1| - 1.2e-10 41.9 0.1 6.1e-09 36.5 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_23 PF13384.1 gi|21229445|ref|NP_635367.1| - 9.3e-09 34.6 0.3 1.1e-06 28.0 0.0 2.9 2 1 1 3 3 3 1 Homeodomain-like domain TFX_C PF14601.1 gi|21229445|ref|NP_635367.1| - 0.018 14.8 0.2 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term HTH_28 PF13518.1 gi|21229445|ref|NP_635367.1| - 0.04 13.9 0.0 1.8 8.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.14 gi|21229445|ref|NP_635367.1| - 0.051 12.9 0.2 0.44 9.9 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family TrmB PF01978.14 gi|21229445|ref|NP_635367.1| - 0.15 11.7 0.8 0.59 9.8 0.1 2.2 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DDE_3 PF13358.1 gi|21229446|ref|NP_635368.1| - 1.6e-20 73.3 0.0 2.7e-20 72.6 0.0 1.3 2 0 0 2 2 2 1 DDE superfamily endonuclease PRA1 PF03208.14 gi|21229447|ref|NP_635369.1| - 0.16 11.2 1.1 0.27 10.5 0.7 1.6 1 1 0 1 1 1 0 PRA1 family protein Neurensin PF14927.1 gi|21229447|ref|NP_635369.1| - 2 7.7 4.8 3.2 7.1 0.1 2.0 1 1 1 2 2 2 0 Neurensin PepSY_TM PF03929.11 gi|21229447|ref|NP_635369.1| - 4.8 7.7 8.6 0.9 10.0 2.2 2.1 2 0 0 2 2 2 0 PepSY-associated TM helix Gly_transf_sug PF04488.10 gi|21229449|ref|NP_635371.1| - 0.11 12.8 0.2 0.19 12.1 0.1 1.6 1 1 0 1 1 1 0 Glycosyltransferase sugar-binding region containing DXD motif MORN_2 PF07661.8 gi|21229450|ref|NP_635372.1| - 0.12 12.4 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 MORN repeat variant SBP_bac_3 PF00497.15 gi|21229451|ref|NP_635373.1| - 0.11 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 PRiA4_ORF3 PF07929.6 gi|21229452|ref|NP_635374.1| - 6.7e-70 234.1 0.3 7.5e-70 233.9 0.2 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein CBM_10 PF02013.11 gi|21229452|ref|NP_635374.1| - 0.054 13.7 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Cellulose or protein binding domain RAMPs PF03787.10 gi|21229455|ref|NP_635377.1| - 2.2e-06 27.6 3.1 4.8e-06 26.5 1.4 2.0 2 1 0 2 2 2 1 RAMP superfamily Sec20 PF03908.8 gi|21229456|ref|NP_635378.1| - 0.19 11.4 1.3 6.7 6.4 0.2 2.1 1 1 1 2 2 2 0 Sec20 RAMPs PF03787.10 gi|21229457|ref|NP_635379.1| - 1.1e-23 84.2 0.0 1.6e-23 83.6 0.0 1.3 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.5 gi|21229457|ref|NP_635379.1| - 0.1 11.9 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.10 gi|21229459|ref|NP_635381.1| - 0.00013 21.8 1.6 0.001 18.9 1.1 2.3 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.10 gi|21229460|ref|NP_635382.1| - 8.6e-18 64.9 2.8 1.8e-17 63.9 0.1 2.1 2 0 0 2 2 2 1 RAMP superfamily GIIM PF08388.6 gi|21229462|ref|NP_635384.1| - 0.00018 21.1 0.0 0.00028 20.6 0.0 1.3 1 0 0 1 1 1 1 Group II intron, maturase-specific domain RVT_1 PF00078.22 gi|21229462|ref|NP_635384.1| - 0.0085 15.4 0.1 0.021 14.1 0.0 1.6 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) MerT PF02411.10 gi|21229464|ref|NP_635386.1| - 0.11 12.3 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 MerT mercuric transport protein Toxin_19 PF08088.7 gi|21229466|ref|NP_635388.1| - 0.0011 18.8 6.1 0.079 12.8 1.0 2.1 2 0 0 2 2 2 2 Conotoxin I-superfamily FAM150 PF15129.1 gi|21229466|ref|NP_635388.1| - 0.19 11.6 0.5 0.28 11.0 0.1 1.5 1 1 1 2 2 2 0 FAM150 family CarbpepA_inh PF02977.10 gi|21229466|ref|NP_635388.1| - 5.5 6.6 8.0 6.1 6.5 0.8 2.3 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor DUF4608 PF15381.1 gi|21229467|ref|NP_635389.1| - 9.9 6.3 6.7 3.2 7.9 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4608) Neural_ProG_Cyt PF06567.6 gi|21229472|ref|NP_635394.1| - 0.0038 17.3 2.0 3.1 7.9 0.0 3.8 2 2 2 4 4 4 3 Neural chondroitin sulphate proteoglycan cytoplasmic domain YoaP PF14268.1 gi|21229473|ref|NP_635395.1| - 2.9e-16 58.4 0.0 5.3e-16 57.5 0.0 1.5 1 0 0 1 1 1 1 YoaP-like Acetyltransf_1 PF00583.19 gi|21229473|ref|NP_635395.1| - 2.6e-06 27.3 0.0 4.8e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_CG PF14542.1 gi|21229473|ref|NP_635395.1| - 0.00016 21.4 0.1 0.00044 20.0 0.0 1.8 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_7 PF13508.1 gi|21229473|ref|NP_635395.1| - 0.012 15.7 0.2 0.023 14.8 0.1 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain